Psyllid ID: psy3652

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390----
Protein Sequence
MFRSVRHLQCLRFRSYSDSVSKYPFLKELGLSGSVNPGVYDGTSWKANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALVGVAVQSRFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKKKIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTINHGKEITLAQGIKFE
Secondary Structure (PSIPRED)
ccccccccccccccccccccccHHHHHHccccccccccEEEccEEEccccEEEccccccccEEEEEEcccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHccccHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccEEEEEEcccEEEEEEccccccEEEEcHHHHHHHHHHHHHHHHccHHHHccccccccccccccHHHHHHHHHccEEcccccccccccEEEEEccccccccccccccEEcccccHHHHHHHcccccEEEEEEcccHHHHHHHHcccccccEEEEEcccHHHHHHHHcccccEEEEEEEcccccccccccccccccccccccccHHHHHHHHEEEEEEEEEcccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccEEcccHHHHHHHHHHHcccccccccccccccccEEEEccEEEccccEEEEEccccccEEEEEccccHHHHHHHHHHHHHHcccHHcccHHHHHHHHHHHHHHHHHcHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHccccEcccccHHHHHHHccccccEEEEEccccccccccccHHHHHHHHHHHHccccEEEEEccccEEEEEcccccHHHHHHHHHHHHHHHHHcccEEccEEEEcccccccccccccccEcccccccccEEEHHHccccHEEEccccHHHHHHHHccccHcHEHEEEcccHHHHHHHHHHHHccccEEEEEcccccccccccccccccccccccHHHHHHHHHEEEEEEEEEcccccccHcccEcc
Coil and Loop (DISEMBL)
mfrsvrhlqclrfrsysdsvskypflkelglsgsvnpgvydgtswkangeiipsinpstgetiASVQQGNVQDYHRCIESSRAAYAAWAalpaprrgeIVRQIGDALRHklvplgqlvsLEMGKILAEGIGEVQEFIDICDYAvglsrtysgsilpserpghvllenwnplgvvGIISAFNFPVAVYGWNAAIALVGVAVQSRFGKLLLElggnnaiivnEDADLNLAQQCLVFAccgtagqrctTTRRLFLHkkkidrpgyfveptivtglphnsrvvhretfapivyvfpfdsldeAITWNNEvkqglsssiftkDVTNLFkwlgpqgsdcglinvniptngaeiggafggekytgggresgsdswkQYCRRSTVTINHGKEITLAQGIKFE
Flexible Loop (DISEMBL)
mfrsvrhlqclrfrsysdsvskYPFLKelglsgsvnpGVYDGTSWKANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALVGVAVQSRFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFlhkkkidrpgyfVEPTivtglphnsrvVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRstvtinhgkeitlaqgikfe
Low Complexity Region (SEG)
MFRSVRHLQCLRFRSYSDSVSKYPFLKELGLSGSVNPGVYDGTSWKANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRaayaawaalpaPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALVGVAVQSRFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKKKIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTINHGKEITLAQGIKFE
Disordered region (IsUnstruct)
*****RHLQCLRFRSYSDSVSKYPFLKELGLSGSVNPGVYDGTSWKANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALVGVAVQSRFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKKKIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYT**********WKQYCRRSTVTINHGKEITLA******
Disordered Region (DISOPRED)
***********************PFLKELGLSGSVNPGVYDGTSWKANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALVGVAVQSRFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKKKIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTINHGKEITLAQGI***
Disordered Region (DISEMBL)
MFRSVRHLQCLRFRSYSDSVSKYPFLKELGLSGSVNPGVYDGTSWKANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALVGVAVQSRFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKKKIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYT***********KQYCRRSTVTINHGKEITLAQGIKFE
Disordered Region (DISPRO)
***SVRHLQCLRFRSYSDSVSKYPFLKELGLSGSVNPGVYDGTSWKANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALVGVAVQSRFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKKKIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTINHGKEITLAQGIKFE
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MFRSVRHLQCLRFRSYSDSVSKYPFLKELGLSGSVNPGVYDGTSWKANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALVGVAVQSRFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKKKIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTINHGKEITLAQGIKFE
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	394	2.2.26 [Sep-21-2011]
P46562	531	Putative aldehyde dehydro	yes	N/A	0.507	0.376	0.540	1e-68
P49419	539	Alpha-aminoadipic semiald	no	N/A	0.505	0.369	0.515	4e-66
Q64057	539	Alpha-aminoadipic semiald	yes	N/A	0.505	0.369	0.523	5e-66
Q9DBF1	539	Alpha-aminoadipic semiald	yes	N/A	0.505	0.369	0.527	6e-66
P25795	508	Aldehyde dehydrogenase fa	N/A	N/A	0.532	0.413	0.503	1e-61
Q2KJC9	539	Alpha-aminoadipic semiald	yes	N/A	0.439	0.320	0.628	5e-60
Q9ZPB7	508	Aldehyde dehydrogenase fa	N/A	N/A	0.532	0.413	0.492	2e-59
P83401	509	Putative aldehyde dehydro	yes	N/A	0.649	0.502	0.392	5e-58
Q41247	494	Aldehyde dehydrogenase fa	N/A	N/A	0.444	0.354	0.587	6e-56
Q9SYG7	508	Aldehyde dehydrogenase fa	yes	N/A	0.444	0.344	0.579	2e-55

>sp|P46562|AL7A1_CAEEL Putative aldehyde dehydrogenase family 7 member A1 homolog OS=Caenorhabditis elegans GN=alh-9 PE=3 SV=2

 Score =  260 bits (665), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 141/261 (54%), Positives = 163/261 (62%), Gaps = 61/261 (23%)

Query: 195 LVGVAVQSRFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHK 254
           +VG  VQ+RFGKLLLELGGNNAIIVNEDADLN+     VFA  GTAGQRCTTTRRL +H 
Sbjct: 271 IVGQQVQARFGKLLLELGGNNAIIVNEDADLNMVVPATVFAAVGTAGQRCTTTRRLIVHD 330

Query: 255 KKID---------------RPGYFVEPTIVTGLPHN------------------------ 275
           K  D               R G  ++   + G  HN                        
Sbjct: 331 KVYDQVLERLKKAYAQFESRIGCPLDSNTIIGPLHNQQAVGKYKASVAEAVASGGKIEYG 390

Query: 276 ----------------------SRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSS 313
                                 S VV RETFAPI+YV  F +L+EAI  NNEV QGLSSS
Sbjct: 391 GKVLERDGNFVLPTIVTGLKHDSPVVLRETFAPILYVLKFSTLEEAIAINNEVDQGLSSS 450

Query: 314 IFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCR 373
           +FT ++ N+FKW+GP+GSDCG++NVNIPT+GAEIGGAFGGEK TGGGRESGSDSW+QY R
Sbjct: 451 LFTTNIQNVFKWMGPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGGRESGSDSWRQYMR 510

Query: 374 RSTVTINHGKEITLAQGIKFE 394
           RST TIN+ KE+ LAQGIKFE
Sbjct: 511 RSTCTINYSKELPLAQGIKFE 531

Caenorhabditis elegans (taxid: 6239)
EC: 1EC: .EC: 2EC: .EC: 1EC: .EC: 3

>sp|P49419|AL7A1_HUMAN Alpha-aminoadipic semialdehyde dehydrogenase OS=Homo sapiens GN=ALDH7A1 PE=1 SV=5

 Score =  252 bits (643), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 133/258 (51%), Positives = 161/258 (62%), Gaps = 59/258 (22%)

Query: 196 VGVAVQSRFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK 255
           VG+ VQ RFG+ LLELGGNNAII  EDADL+L     +FA  GTAGQRCTT RRLF+H+ 
Sbjct: 282 VGLMVQERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHES 341

Query: 256 KID-------------RPGYFVEPTIVTG------------------------------- 271
             D             R G   +P ++ G                               
Sbjct: 342 IHDEVVNRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKV 401

Query: 272 ---------------LPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFT 316
                          L H++ + H ETFAPI+YVF F + +E   WNNEVKQGLSSSIFT
Sbjct: 402 MDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFKNEEEVFAWNNEVKQGLSSSIFT 461

Query: 317 KDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRST 376
           KD+  +F+WLGP+GSDCG++NVNIPT+GAEIGGAFGGEK+TGGGRESGSD+WKQY RRST
Sbjct: 462 KDLGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDAWKQYMRRST 521

Query: 377 VTINHGKEITLAQGIKFE 394
            TIN+ K++ LAQGIKF+
Sbjct: 522 CTINYSKDLPLAQGIKFQ 539

Multifunctional enzyme mediating important protective effects. Metabolizes betaine aldehyde to betaine, an important cellular osmolyte and methyl donor. Protects cells from oxidative stress by metabolizing a number of lipid peroxidation-derived aldehydes. Involved in lysine catabolism.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 8

>sp|Q64057|AL7A1_RAT Alpha-aminoadipic semialdehyde dehydrogenase OS=Rattus norvegicus GN=Aldh7a1 PE=1 SV=2

 Score =  251 bits (642), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 135/258 (52%), Positives = 160/258 (62%), Gaps = 59/258 (22%)

Query: 196 VGVAVQSRFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK 255
           V + VQ RFGK LLELGGNNAII  EDADL+L     +FA  GTAGQRCTT RRLFLH+ 
Sbjct: 282 VALMVQERFGKSLLELGGNNAIIAFEDADLSLVLPSALFAAVGTAGQRCTTVRRLFLHES 341

Query: 256 KID-------------RPGYFVEPTIVTG------------------------------- 271
             D             R G   +P I+ G                               
Sbjct: 342 IHDEVVDRLKNAYSQIRVGNPWDPNILYGPLHTKQAVSMFVQAVEEAKKEGGTVVYGGKV 401

Query: 272 ---------------LPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFT 316
                          L H++ +VH+ETFAPI+YVF F + +E   WNNEVKQGLSSSIFT
Sbjct: 402 MDHPGNYVEPTIVTGLVHDAPIVHKETFAPILYVFKFKNEEEVFEWNNEVKQGLSSSIFT 461

Query: 317 KDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRST 376
           KD+  +F+WLGP+GSDCG++NVNIPT+GAEIGGAFGGEK+TGGGRESGSD+WKQY RRST
Sbjct: 462 KDLGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDAWKQYMRRST 521

Query: 377 VTINHGKEITLAQGIKFE 394
            TIN+   + LAQGIKF+
Sbjct: 522 CTINYSTALPLAQGIKFQ 539

Multifunctional enzyme mediating important protective effects. Metabolizes betaine aldehyde to betaine, an important cellular osmolyte and methyl donor. Protects cells from oxidative stress by metabolizing a number of lipid peroxidation-derived aldehydes. Involved in lysine catabolism.

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 8

>sp|Q9DBF1|AL7A1_MOUSE Alpha-aminoadipic semialdehyde dehydrogenase OS=Mus musculus GN=Aldh7a1 PE=1 SV=4

 Score =  251 bits (641), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 136/258 (52%), Positives = 162/258 (62%), Gaps = 59/258 (22%)

Query: 196 VGVAVQSRFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHK- 254
           V + VQ RFGK LLELGGNNAII  EDADL+L    ++FA  GTAGQRCTT RRLFLH+ 
Sbjct: 282 VALMVQERFGKSLLELGGNNAIIAFEDADLSLVVPSVLFAAVGTAGQRCTTVRRLFLHES 341

Query: 255 ---KKIDR---------------PGYFVEP----------------------TIVTG--- 271
              + +DR               P     P                      T+V G   
Sbjct: 342 IHNEVVDRLRSAYSQIRVGNPWDPNILYGPLHTKQAVSMFVRAVEEAKKQGGTVVYGGKV 401

Query: 272 ---------------LPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFT 316
                          L H++ +VH+ETFAPI+YVF F   +E   WNNEVKQGLSSSIFT
Sbjct: 402 MDHPGNYVEPTIVTGLAHDAPIVHQETFAPILYVFKFQDEEEVFEWNNEVKQGLSSSIFT 461

Query: 317 KDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRST 376
           KD+  +F+WLGP+GSDCG++NVNIPT+GAEIGGAFGGEK+TGGGRESGSD+WKQY RRST
Sbjct: 462 KDLGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDAWKQYMRRST 521

Query: 377 VTINHGKEITLAQGIKFE 394
            TIN+   + LAQGIKF+
Sbjct: 522 CTINYSTSLPLAQGIKFQ 539

Multifunctional enzyme mediating important protective effects. Metabolizes betaine aldehyde to betaine, an important cellular osmolyte and methyl donor. Protects cells from oxidative stress by metabolizing a number of lipid peroxidation-derived aldehydes. Involved in lysine catabolism.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 8

>sp|P25795|AL7A1_PEA Aldehyde dehydrogenase family 7 member A1 OS=Pisum sativum PE=1 SV=3

 Score =  237 bits (604), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 135/268 (50%), Positives = 158/268 (58%), Gaps = 58/268 (21%)

Query: 184 VAVYGWNAAIALVGVAVQSRFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQR 243
           V+  G +   ALV   V  RFGK LLEL GNNAIIV +DAD+ LA + + FA  GTAGQR
Sbjct: 240 VSFTGSSKVGALVQQTVSQRFGKTLLELSGNNAIIVMDDADITLAVRSIFFAAVGTAGQR 299

Query: 244 CTTTRRLFLHKK----------------KIDRP---GYFVEP------------------ 266
           CTT RRL+LH+                 KI  P   G  V P                  
Sbjct: 300 CTTCRRLYLHESVYANVLEQLTALYKQVKIGNPLEEGTLVGPLHTRSAVENFKNGISAIK 359

Query: 267 ----TIVTG-----------------LPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNE 305
                IVTG                 +  ++ VV  E FAP++YV  F  L+EAI  NN 
Sbjct: 360 SQGGKIVTGGSVLESEGNFVVPTIVEISADAAVVKEELFAPVLYVMKFKDLEEAIALNNS 419

Query: 306 VKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGS 365
           V QGLSSSIFT+  + +FKW+GP GSDCG++NVNIPTNGAEIGGAFGGEK TGGGRE+GS
Sbjct: 420 VPQGLSSSIFTQKPSTIFKWIGPSGSDCGIVNVNIPTNGAEIGGAFGGEKATGGGREAGS 479

Query: 366 DSWKQYCRRSTVTINHGKEITLAQGIKF 393
           DSWKQY RRST TIN+G E+ LAQGI F
Sbjct: 480 DSWKQYMRRSTCTINYGSELPLAQGINF 507

Pisum sativum (taxid: 3888)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 3

>sp|Q2KJC9|AL7A1_BOVIN Alpha-aminoadipic semialdehyde dehydrogenase OS=Bos taurus GN=ALDH7A1 PE=2 SV=4

 Score =  232 bits (591), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 110/175 (62%), Positives = 137/175 (78%), Gaps = 2/175 (1%)

Query: 22  KYPFLKELGLSGSVNPGVYDGTSWKANGEIIPSINPSTGETIASVQQGNVQDYHRCIESS 81
           +Y +LKELGL    N GVY+G SW   GE+I +  P+  E IA V+Q ++ DY   +E +
Sbjct: 38  QYAWLKELGLREE-NDGVYNG-SWGGRGEVITTYCPANNEPIARVRQASMADYEETVEKA 95

Query: 82  RAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICD 141
           R A++ WA +PAP+RGE+VRQIGDALR K+  LG LVSLEMGKIL EG+GEVQE++D+CD
Sbjct: 96  REAWSIWADVPAPKRGEVVRQIGDALREKIQVLGSLVSLEMGKILVEGVGEVQEYVDVCD 155

Query: 142 YAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALV 196
           YAVGLSR   G ILPSERPGH L+E WNP+G+VGII+AFNFPVAVYGWN AIA++
Sbjct: 156 YAVGLSRMIGGPILPSERPGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMI 210

Multifunctional enzyme mediating important protective effects. Metabolizes betaine aldehyde to betaine, an important cellular osmolyte and methyl donor. Protects cells from oxidative stress by metabolizing a number of lipid peroxidation-derived aldehydes. Involved in lysine catabolism.

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 8

>sp|Q9ZPB7|AL7A1_MALDO Aldehyde dehydrogenase family 7 member A1 OS=Malus domestica PE=1 SV=3

 Score =  230 bits (586), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 132/268 (49%), Positives = 155/268 (57%), Gaps = 58/268 (21%)

Query: 184 VAVYGWNAAIALVGVAVQSRFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQR 243
           V+  G +   A V   V  RFGK LLEL GNNA+IV +DAD+ LA + + FA  GTAGQR
Sbjct: 240 VSFTGSSKVGAKVQQIVTERFGKCLLELSGNNALIVMDDADVGLAVRSIFFAAVGTAGQR 299

Query: 244 CTTTRRLFLHKK----------------KIDRP---GYFVEPT----------------- 267
           CTT RRL+LH+                 KI  P   G  V P                  
Sbjct: 300 CTTCRRLYLHESIYQNVLDKLVGLYNQVKIGDPLEEGTLVGPVHTKASRENFEKGISTIK 359

Query: 268 -----IVTG-----------------LPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNE 305
                I+TG                 +  N+ VV  E F P++YV  F +L+EAI  NN 
Sbjct: 360 SQGGKILTGGSVIESDGNFVQPTIVEIASNASVVKEELFGPVLYVMKFKTLEEAIALNNS 419

Query: 306 VKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGS 365
           V QGLSSSIFT     +FKW+GP GSDCG++NVNIPTNGAEIGGAFGGEK TGGGRE+GS
Sbjct: 420 VPQGLSSSIFTSKPNTIFKWIGPHGSDCGIVNVNIPTNGAEIGGAFGGEKATGGGREAGS 479

Query: 366 DSWKQYCRRSTVTINHGKEITLAQGIKF 393
           DSWKQY RRST TIN+G E+ LAQGI F
Sbjct: 480 DSWKQYMRRSTCTINYGTELPLAQGINF 507

May play a role in fruit development.

Malus domestica (taxid: 3750)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 3

>sp|P83401|AL7A1_DICDI Putative aldehyde dehydrogenase family 7 member A1 homolog OS=Dictyostelium discoideum GN=DDB_G0276821 PE=3 SV=2

 Score =  225 bits (573), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 132/336 (39%), Positives = 171/336 (50%), Gaps = 80/336 (23%)

Query: 117 LVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGI 176
           L++L + KI+ + + E      +C   +G  RT    ++  +R G +       +G    
Sbjct: 194 LITLAVSKIIEKVLVENDVDPAVCCVLIGPGRTVGEQMIQDKRFGLISFTGSTEVG---- 249

Query: 177 ISAFNFPVAVYGWNAAIALVGVAVQSRFGKLLLELGGNNAIIVNEDADLNLAQQCLVFAC 236
                              +   V   FGK +LELGGNNAI+V EDAD+ L  + ++FA 
Sbjct: 250 -----------------RRISSTVHGYFGKTILELGGNNAIVVAEDADIELVLRAVLFAS 292

Query: 237 CGTAGQRCTTTRRLFLHKKKID-------------RPGYFVEPTIVTGLPHNSRVVHR-- 281
            GT GQRCTT RRLF+H+   D             + G  +E  ++ G  H    V    
Sbjct: 293 VGTTGQRCTTCRRLFVHESLYDTILERLTKAYKTIKIGNPLEEGVLVGPLHTQSAVKEFT 352

Query: 282 --------------------------------------------ETFAPIVYVFPFDSLD 297
                                                       E F PI+Y+  F +LD
Sbjct: 353 EGLEEIKKQGGKVVIGGNKLDISGGNFVEPTVVAIEHDAPIVKTELFVPILYIMKFKNLD 412

Query: 298 EAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYT 357
           +A  WNNEV QGLSSS+FT +  N+FKWLGP GSDCG++NVN+ TNGAEIGGAFGGEK T
Sbjct: 413 DAFAWNNEVPQGLSSSLFTNNQKNIFKWLGPTGSDCGIVNVNVATNGAEIGGAFGGEKET 472

Query: 358 GGGRESGSDSWKQYCRRSTVTINHGKEITLAQGIKF 393
           GGGRESGSDSWKQYCRRST TIN+G  + L+QGI F
Sbjct: 473 GGGRESGSDSWKQYCRRSTNTINYGNTMPLSQGINF 508

Dictyostelium discoideum (taxid: 44689)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 3

>sp|Q41247|AL7A1_BRANA Aldehyde dehydrogenase family 7 member A1 OS=Brassica napus GN=BTG-26 PE=1 SV=3

 Score =  218 bits (555), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 104/177 (58%), Positives = 134/177 (75%), Gaps = 2/177 (1%)

Query: 22  KYPFLKELGLSGSVNPGVYDGTSWKANGEIIPSINPSTGET--IASVQQGNVQDYHRCIE 79
           +Y FL E+GLS S N G Y G  W  NG ++ ++NP+  +   IA V + +++DY   ++
Sbjct: 7   EYEFLSEIGLSSSHNLGNYVGGKWLGNGPLVSTLNPANNQVLPIAQVVEASLEDYEIGLK 66

Query: 80  SSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDI 139
           +   A   W  +PAP+RG+IVRQIGDALR KL  LG+L+SLEMGKILAEGIGEVQE ID+
Sbjct: 67  ACEEAAKTWMQVPAPKRGDIVRQIGDALRSKLDYLGRLLSLEMGKILAEGIGEVQEVIDM 126

Query: 140 CDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALV 196
           CD+AVGLSR  +GS++PSERP H++LE WNPLG+VG+I+AFNFP AV GWNA IALV
Sbjct: 127 CDFAVGLSRQLNGSVIPSERPNHMMLEMWNPLGIVGVITAFNFPCAVLGWNACIALV 183

Brassica napus (taxid: 3708)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 3

>sp|Q9SYG7|AL7B4_ARATH Aldehyde dehydrogenase family 7 member B4 OS=Arabidopsis thaliana GN=ALDH7B4 PE=2 SV=3

 Score =  217 bits (552), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 102/176 (57%), Positives = 136/176 (77%), Gaps = 1/176 (0%)

Query: 21  SKYPFLKELGLSGSVNPGVYDGTSWKANGEIIPSINPSTGETIASVQQGNVQDYHRCIES 80
           ++Y FL E+GL+ S N G Y    W+ANG ++ ++NP+  + IA V + +++DY + +++
Sbjct: 6   NEYEFLSEIGLT-SHNLGSYVAGKWQANGPLVSTLNPANNQPIAQVVEASLEDYEQGLKA 64

Query: 81  SRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDIC 140
              A   W  + AP+RG+IVRQIGDALR KL  LG+L+SLEMGKILAEGIGEVQE ID+C
Sbjct: 65  CEEAAKIWMQVTAPKRGDIVRQIGDALRSKLDYLGRLLSLEMGKILAEGIGEVQEVIDMC 124

Query: 141 DYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALV 196
           D+AVGLSR  +GS++PSERP H++LE WNPLG+VG+I+AFNFP AV GWNA IALV
Sbjct: 125 DFAVGLSRQLNGSVIPSERPNHMMLEMWNPLGIVGVITAFNFPCAVLGWNACIALV 180

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 3

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	394
444727966	540	Alpha-aminoadipic semialdehyde dehydroge	0.941	0.687	0.477	1e-118
148223856	511	alpha-aminoadipic semialdehyde dehydroge	0.941	0.726	0.474	1e-113
62858515	511	alpha-aminoadipic semialdehyde dehydroge	0.941	0.726	0.462	1e-108
224073640	516	predicted protein [Populus trichocarpa]	0.941	0.718	0.449	1e-103
322796034	463	hypothetical protein SINV_80107 [Solenop	0.984	0.838	0.469	1e-102
383764383	504	piperideine-6-carboxylate dehydrogenase	0.936	0.732	0.396	5e-84
426349812	448	PREDICTED: alpha-aminoadipic semialdehyd	0.865	0.761	0.459	3e-83
423316779	516	hypothetical protein HMPREF9699_01255 [B	0.934	0.713	0.395	7e-82
406673541	516	hypothetical protein HMPREF9700_01304 [B	0.934	0.713	0.393	2e-81
363582410	513	l-aminoadipate-semialdehyde dehydrogenas	0.913	0.701	0.391	6e-81

>gi|444727966|gb|ELW68437.1| Alpha-aminoadipic semialdehyde dehydrogenase [Tupaia chinensis]

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 241/505 (47%), Positives = 294/505 (58%), Gaps = 134/505 (26%)

Query: 22  KYPFLKELGLSGSVNPGVYDGTSWKANGEIIPSINPSTGETIASVQQGNVQDYHRCIESS 81
           +Y +LKELGL    N GVY+G SW   GE+I +  P+  E IA V+Q ++ DY   ++ +
Sbjct: 38  QYAWLKELGLREE-NEGVYNG-SWGGRGEVITTYCPANNEPIARVRQASMVDYEETVKKA 95

Query: 82  RAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICD 141
           R A+  WA +PAP+RGEIVRQIGDALR K+  LG LVSLEMGKIL EG+GEVQE++DICD
Sbjct: 96  REAWKVWADIPAPKRGEIVRQIGDALREKIQVLGNLVSLEMGKILVEGVGEVQEYVDICD 155

Query: 142 YAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYG------------- 188
           YAVGLSR   G ILPSERPGH L+E WNP+G+VGII+AFNFPVAVYG             
Sbjct: 156 YAVGLSRMIGGPILPSERPGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNVC 215

Query: 189 -WNAA-----------------IALVGVAVQSRFGKLL---------------------- 208
            W  A                  +L+ VAV     K+L                      
Sbjct: 216 LWKGAPTTSLISVAVTKKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCGGADIGTA 275

Query: 209 ---------------LELGGNNAIIVNE-----DADLNLAQQCLVFACCGTAGQRCTTTR 248
                           ++G   A++V E     DADL+L     +FA  GTAGQRCTT R
Sbjct: 276 MAKDKRVNLLSFTGSTQVGKQVALLVQERFVFEDADLSLVVPSALFAAVGTAGQRCTTAR 335

Query: 249 RLF----------------------------------LHKKK------------------ 256
           RLF                                  LH K+                  
Sbjct: 336 RLFLHENIHDEVVNRLKKAYAQIRVGNPWDSDVLYGPLHTKQAVSMFLGAVEAARKEGGT 395

Query: 257 -------IDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQG 309
                  +DRPG +VEPTIVTGL HN+ + H ETFAPI+YVF F   +E   WNNEV+QG
Sbjct: 396 VVCGGQVMDRPGNYVEPTIVTGLAHNASIAHTETFAPILYVFKFKEEEEVFAWNNEVQQG 455

Query: 310 LSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWK 369
           LSSSIFTKD+  +F+WLGP+GSDCG++NVNIPT+GAEIGGAFGGEK+TGGGRESGSD+WK
Sbjct: 456 LSSSIFTKDLGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDAWK 515

Query: 370 QYCRRSTVTINHGKEITLAQGIKFE 394
           QY RRST TIN+ K++ LAQGIKF+
Sbjct: 516 QYMRRSTCTINYSKDLPLAQGIKFQ 540

Source: Tupaia chinensis

Species: Tupaia chinensis

Genus: Tupaia

Family: Tupaiidae

Order: Scandentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|148223856|ref|NP_001087698.1| alpha-aminoadipic semialdehyde dehydrogenase [Xenopus laevis] gi|51703516|gb|AAH81104.1| MGC83352 protein [Xenopus laevis]

 Score =  414 bits (1063), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 239/504 (47%), Positives = 293/504 (58%), Gaps = 133/504 (26%)

Query: 22  KYPFLKELGLSGSVNPGVYDGTSWKANGEIIPSINPSTGETIASVQQGNVQDYHRCIESS 81
           +Y +LK+LGL    N GVY GT W   GE++ S  P+T   IA V+Q  +++Y+  ++ +
Sbjct: 10  EYSWLKDLGLKEE-NEGVYSGT-WGGKGEVVTSYCPATNAPIARVKQATLEEYNETVKKA 67

Query: 82  RAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICD 141
           +AA+  WA +PAP+RGEIVRQIGDALR K+  LG L SLEMGKIL EG+GEVQE++DICD
Sbjct: 68  KAAWQIWADIPAPKRGEIVRQIGDALRKKIKLLGHLESLEMGKILVEGVGEVQEYVDICD 127

Query: 142 YAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALV----- 196
           YAVGLSR   G ILPSERPGH L+E WNP+G+VGII+AFNFPVAVYGWN A+AL+     
Sbjct: 128 YAVGLSRIIGGPILPSERPGHALIEQWNPVGLVGIITAFNFPVAVYGWNNALALICGNVC 187

Query: 197 -----------GVAVQSRFGKLL-----------LELGG---NNAIIVNEDADL------ 225
                       VAV     ++L           L  GG    NAI  +E  DL      
Sbjct: 188 LWKGAPTTSLTSVAVTKIVAQVLEHNNLPGAICSLTCGGADIGNAIAKDERVDLVSFTGS 247

Query: 226 -NLAQQC-----------------------------------LVFACCGTAGQRCTTTRR 249
            N+ +Q                                    ++FA  GTAGQRCTT RR
Sbjct: 248 TNVGKQVALKVQERFGRKLLELGGNNAIIVFEDADLSLVTPSVLFAAVGTAGQRCTTARR 307

Query: 250 LFLHKKKID-------------RPGYFVEP----------------------------TI 268
           LFLH+   D             R G   EP                            T+
Sbjct: 308 LFLHESIHDEIVEKLSKAYAQVRIGDPCEPDTLCGPLHTKQAVEMYLSAVEQAKCEGGTV 367

Query: 269 VTG------------------LPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGL 310
           V G                  L H+S +VH+ETFAPI+YV  F + +EA  WNNEVKQGL
Sbjct: 368 VCGGKVIDRPGNFVEPTIMTGLAHDSAIVHKETFAPILYVIKFKTEEEAFAWNNEVKQGL 427

Query: 311 SSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQ 370
           SSSIFTKD+  +F+WLGP+GSDCGL+NVNIPT+GAEIGGAFGGEK+TGGGRESGSDSWK 
Sbjct: 428 SSSIFTKDLGRIFRWLGPKGSDCGLVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDSWKH 487

Query: 371 YCRRSTVTINHGKEITLAQGIKFE 394
           Y RRST TIN+ K++ LAQGIKF+
Sbjct: 488 YMRRSTCTINYSKDLPLAQGIKFQ 511

Source: Xenopus laevis

Species: Xenopus laevis

Genus: Xenopus

Family: Pipidae

Order: Anura

Class: Amphibia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|62858515|ref|NP_001016377.1| alpha-aminoadipic semialdehyde dehydrogenase [Xenopus (Silurana) tropicalis] gi|89266774|emb|CAJ83722.1| aldehyde dehydrogenase 7 family, member A1 [Xenopus (Silurana) tropicalis] gi|170284491|gb|AAI61027.1| aldehyde dehydrogenase 7 family, member A1 [Xenopus (Silurana) tropicalis] gi|213625564|gb|AAI70873.1| aldehyde dehydrogenase 7 family, member A1 [Xenopus (Silurana) tropicalis] gi|213627169|gb|AAI70848.1| aldehyde dehydrogenase 7 family, member A1 [Xenopus (Silurana) tropicalis]

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 233/504 (46%), Positives = 283/504 (56%), Gaps = 133/504 (26%)

Query: 22  KYPFLKELGLSGSVNPGVYDGTSWKANGEIIPSINPSTGETIASVQQGNVQDYHRCIESS 81
           +Y +LKELGL    N GVY+GT W   GE++ S  P     IA V+Q  + +Y+  +  +
Sbjct: 10  EYSWLKELGLKED-NEGVYNGT-WGGKGEVVTSYCPGNNAPIARVKQATLDEYNETVNKA 67

Query: 82  RAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICD 141
           + A+  WA +PAP+RGEIVRQIGDALR K+  LG L SLEMGKIL EG+GEVQE++DICD
Sbjct: 68  KEAWKIWADIPAPKRGEIVRQIGDALRKKIKLLGHLESLEMGKILVEGVGEVQEYVDICD 127

Query: 142 YAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALV----- 196
           YAVGLSR   G ILPSERPGH L+E WNP+G+VGII+AFNFPVAVYGWN A+AL+     
Sbjct: 128 YAVGLSRIIGGPILPSERPGHALIEQWNPVGLVGIITAFNFPVAVYGWNNALALICGNVC 187

Query: 197 -----------GVAVQSRFGKLL-----------LELGG---NNAIIVNEDADL------ 225
                       VAV     ++            L  GG    NAI  +E  DL      
Sbjct: 188 LWKGAPTTSLTSVAVTKIVAQVFEDNKLPGAICSLTCGGADIGNAIAKDERVDLVSFTGS 247

Query: 226 -NLAQQC---------------------LVF--------------ACCGTAGQRCTTTRR 249
            N+ +Q                      +VF              A  GTAGQRCTT RR
Sbjct: 248 TNVGKQVALKVQERFGRKLLELGGNNAIIVFEDADLSLVTPSVLFAAVGTAGQRCTTARR 307

Query: 250 LFLHKKKID-------------RPGYFVEPTIVTGLPHNSR------------------- 277
           LFLH+   D             R G    P  + G  H  +                   
Sbjct: 308 LFLHESIHDEIVEKLSKAYAQVRIGDPCAPDTLCGPLHTKQAVEMYLSAVEQAKCEGGTV 367

Query: 278 ---------------------------VVHRETFAPIVYVFPFDSLDEAITWNNEVKQGL 310
                                      +VH+ETFAPI+YV  F + +EA  WNNEVKQGL
Sbjct: 368 VCGGKVIDRPGNFVEPTIMTGLAHDAAIVHKETFAPILYVIKFKTEEEAFAWNNEVKQGL 427

Query: 311 SSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQ 370
           SSSIFTKD+  +F+WLGP+GSDCGL+NVNIPT+GAEIGGAFGGEK+TGGGRESGSDSWK 
Sbjct: 428 SSSIFTKDLGRIFRWLGPKGSDCGLVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDSWKH 487

Query: 371 YCRRSTVTINHGKEITLAQGIKFE 394
           Y RRST TIN+ K++ LAQGIKF+
Sbjct: 488 YMRRSTCTINYSKDLPLAQGIKFQ 511

Source: Xenopus (Silurana) tropicalis

Species: Xenopus (Silurana) tropicalis

Genus: Xenopus

Family: Pipidae

Order: Anura

Class: Amphibia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|224073640|ref|XP_002304124.1| predicted protein [Populus trichocarpa] gi|222841556|gb|EEE79103.1| predicted protein [Populus trichocarpa]

 Score =  380 bits (976), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 229/510 (44%), Positives = 283/510 (55%), Gaps = 139/510 (27%)

Query: 22  KYPFLKELGLSGSVNPGVYDGTSWKANGEIIPSINPSTGET-IASVQQGNVQDYHRCIES 80
           +Y FL E+GLS S N G Y   +WKANG ++ S+NP+  +  IA V +G+++DY   + +
Sbjct: 7   EYEFLSEIGLS-SRNLGCYVDGTWKANGPVVTSVNPANNQVAIAEVVEGSIEDYEEGMRA 65

Query: 81  SRAAYAAWA-------ALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEV 133
              A   W        A+P+P+RGEIVRQIGDALR KL  LG+LVSLEMGKIL EGIGEV
Sbjct: 66  CSEAAKIWMQASLFFLAVPSPKRGEIVRQIGDALRTKLQQLGRLVSLEMGKILPEGIGEV 125

Query: 134 QEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVV------------------- 174
           QE ID+CD++VGLSR  +GS++PSERP H +LE WNPLG+V                   
Sbjct: 126 QEIIDMCDFSVGLSRQLNGSVIPSERPNHAMLEMWNPLGIVGVITAFNFPCAVLGWNACI 185

Query: 175 ----------------------------GIISAFNFPVAVY-------------GWNAAI 193
                                       G++   N P A++               +A I
Sbjct: 186 ALVCGNCVVWKGAPTTPLITIAMTRLVAGVLEKNNLPPAIFTSFCGGADIGQAVAKDARI 245

Query: 194 ALV--------GVAVQS----RFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAG 241
            LV        G+ VQ     RFGK LLEL GNNAIIV +DA++ LA + ++FA  GTAG
Sbjct: 246 PLVSFTGSSKVGLMVQQIVNQRFGKCLLELSGNNAIIVMDDANIQLAVRSVMFAAVGTAG 305

Query: 242 QRCTTTRRLFLHKK----------------KIDRP---GYFVEP---------------- 266
           QRCTT RRL LH+                 KI  P   G  + P                
Sbjct: 306 QRCTTCRRLLLHESIYQRVLDQLLDVYKQVKIGDPLEKGTLLGPLHTSESRKSFEKGIEI 365

Query: 267 ------TIVTG-----------------LPHNSRVVHRETFAPIVYVFPFDSLDEAITWN 303
                  I+TG                 +  N+ VV  E FAP++YV  F +L EAI  N
Sbjct: 366 IKSQACKIITGGSVIESEGNFVQPTIVEISPNADVVKEELFAPVLYVMKFQTLQEAIEIN 425

Query: 304 NEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRES 363
           N V QGLSSSIFT+    +FKW+GPQGSDCG++NVNIPTNGAEIGGAFGGEK TGGGRE+
Sbjct: 426 NSVPQGLSSSIFTRQPGVIFKWIGPQGSDCGIVNVNIPTNGAEIGGAFGGEKATGGGREA 485

Query: 364 GSDSWKQYCRRSTVTINHGKEITLAQGIKF 393
           GSDSWKQY RRST TIN+G E+ LAQGI F
Sbjct: 486 GSDSWKQYMRRSTCTINYGNELPLAQGINF 515

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|322796034|gb|EFZ18658.1| hypothetical protein SINV_80107 [Solenopsis invicta]

 Score =  377 bits (969), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 213/454 (46%), Positives = 280/454 (61%), Gaps = 66/454 (14%)

Query: 1   MFRSVRHLQCLRFRSYSDSVSKYPFLKELGLSGSVNPGVYDGTSWKANGEIIPSINPSTG 60
           + R  R++   +   +  +  KY FLK+LG++   NPG+YDG  W  +G+++ SI+P+TG
Sbjct: 16  LLRKSRNVSQFQMTRHLVTDPKYGFLKQLGINIE-NPGLYDG-KWGGSGKLVESISPATG 73

Query: 61  ETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSL 120
           + IA V++   Q+    +  +R A+  WA++P P RG+IVRQIGD LR  L PLG+LVSL
Sbjct: 74  KVIAKVRESTPQEACNAVTEARKAWPKWASIPMPARGDIVRQIGDELRKNLEPLGRLVSL 133

Query: 121 EMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAF 180
           EMGKIL EGIGEVQEFIDICDYAVGLSRT SG++ PSER  H LLE WNPLGVVG+ISAF
Sbjct: 134 EMGKILPEGIGEVQEFIDICDYAVGLSRTLSGTVFPSERKSHTLLETWNPLGVVGVISAF 193

Query: 181 NFPVAVYGWNAAIALVG--------------VAV-QSRFGKLLLE---LGGNNAIIVNED 222
           NFP+AVYGWN+AIALV               VA+  +R    +LE   + G+ A ++   
Sbjct: 194 NFPIAVYGWNSAIALVCGNTIVWKEASSTPLVAIATTRIMASVLERNGIPGSVASLITGG 253

Query: 223 ADL-----NLAQQCLV-FACCGTAGQRCTTTRRLFLHKKKIDRPGYFVEPTIVTGLPHNS 276
            D+     N  +  LV F      G++     +    +  ++  G       + GLP  +
Sbjct: 254 PDIGETLVNDKRVPLVSFTGSTNVGRQVALKVQQRFGRSLLELGGN----NALIGLPAGA 309

Query: 277 RVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLF------------- 323
            VV +ETFAPIVY+   +S +EAI  NN V+QGLSSS+FT+ + N+F             
Sbjct: 310 EVVQQETFAPIVYILEANSFEEAIDLNNGVEQGLSSSLFTRSIQNVFQVNIYLVCCANKC 369

Query: 324 -----------------------KWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGG 360
                                  +W+GP GSDCG++NVNI T+GAEIGGAFGGEK TGGG
Sbjct: 370 VATPYKLIYATYLSSFIKCLFVTQWIGPHGSDCGIVNVNIGTSGAEIGGAFGGEKATGGG 429

Query: 361 RESGSDSWKQYCRRSTVTINHGKEITLAQGIKFE 394
           RESGSD+WK Y RR TVT+N+G E+ LAQGIKFE
Sbjct: 430 RESGSDAWKHYMRRGTVTVNYGNELPLAQGIKFE 463

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383764383|ref|YP_005443365.1| piperideine-6-carboxylate dehydrogenase [Caldilinea aerophila DSM 14535 = NBRC 104270] gi|381384651|dbj|BAM01468.1| piperideine-6-carboxylate dehydrogenase [Caldilinea aerophila DSM 14535 = NBRC 104270]

 Score =  317 bits (813), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 199/502 (39%), Positives = 258/502 (51%), Gaps = 133/502 (26%)

Query: 25  FLKELGLSGSVNPGVYDGTS-W-KANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSR 82
            L+ L L  +VN GV  G   W K++   I S NP+TGE IA V   +   Y   +  ++
Sbjct: 4   LLETLHLK-AVNVGVCSGPQRWIKSSAAPITSYNPTTGEPIAQVIPADADAYDAVVTDAQ 62

Query: 83  AAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDY 142
           AA+  W   PAP+RGE++R  G  LR    PLG+LVSLEMGKI AEG+GEVQE IDICD+
Sbjct: 63  AAFRTWRTTPAPKRGEVIRDFGAILREYKEPLGELVSLEMGKIRAEGLGEVQEMIDICDF 122

Query: 143 AVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIA-------- 194
           AVGLSR   G  + SERP H + E W+PLG +GII+AFNFPVAV+ WNAAIA        
Sbjct: 123 AVGLSRQLYGLTMHSERPAHRMYEQWHPLGPIGIITAFNFPVAVWSWNAAIAAVCGDTMV 182

Query: 195 --------LVGVAVQSRFGKLLLELG-----------GNNAIIVNEDADLNL-------- 227
                   L GVAVQ    +++ + G           G+    + ED  L L        
Sbjct: 183 WKPSELVPLCGVAVQHLANRVMADHGLTGIFTLAVGAGDIGQRMAEDRRLPLISFTGSIP 242

Query: 228 ------------------------------------AQQCLVFACCGTAGQRCTTTRRLF 251
                                               A + ++F   GTAGQRCTTTRRL 
Sbjct: 243 TGRRVAQTVAARLGRPLLELGGNNAIIVTEKADLDLAARAILFGAVGTAGQRCTTTRRLI 302

Query: 252 LHKKKID-------------------RPGYFVEP----------------------TIVT 270
           +H+  ++                   +PG  + P                       ++T
Sbjct: 303 VHEAVVEELSDRLVKAYRQVRIGDPLQPGVLMGPLATRRAVEAMMRAIERAVADGGQVLT 362

Query: 271 G------------------LPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSS 312
           G                  +P  + +V  ETFAPI+Y+  + +L+EAI  +N+V QGLSS
Sbjct: 363 GGRPRPDIGPQFVEPTIIRMPAQTEIVKEETFAPILYILTYRTLEEAIALHNDVPQGLSS 422

Query: 313 SIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYC 372
           +IFT  +     +L  +GSDCG+ NVNI T+GAEIGGAFGGEK TGGGRESGSD+WK Y 
Sbjct: 423 AIFTDSLREAEFFLSVEGSDCGIANVNIGTSGAEIGGAFGGEKDTGGGRESGSDAWKAYM 482

Query: 373 RRSTVTINHGKEITLAQGIKFE 394
           RR T TIN  +++ LAQGIKFE
Sbjct: 483 RRQTNTINWSRDLPLAQGIKFE 504

Source: Caldilinea aerophila DSM 14535 = NBRC 104270

Species: Caldilinea aerophila

Genus: Caldilinea

Family: Caldilineaceae

Order: Caldilineales

Class: Caldilineae

Phylum: Chloroflexi

Superkingdom: Bacteria

>gi|426349812|ref|XP_004042480.1| PREDICTED: alpha-aminoadipic semialdehyde dehydrogenase [Gorilla gorilla gorilla]

 Score =  315 bits (806), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 191/416 (45%), Positives = 235/416 (56%), Gaps = 75/416 (18%)

Query: 22  KYPFLKELGLSGSVNPGVYDGTSWKANGEIIPSINPSTGETIASVQQGNVQDYHRCIESS 81
           +Y +LKELGL    N GVY+G SW   GE+I +  P+  E IA V+Q +V DY   ++ +
Sbjct: 65  QYAWLKELGLR-EENEGVYNG-SWGGRGEVITTYCPANNEPIARVRQASVADYEETVKKA 122

Query: 82  RAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICD 141
           R A+  WA                            VSLEMGKIL EG+GEVQE++DICD
Sbjct: 123 REAWKIWAD---------------------------VSLEMGKILVEGVGEVQEYVDICD 155

Query: 142 YAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIA------- 194
           YAVGLSR   G ILPSER GH L+E WNP+G+VGII+AFNFPVAVYGWN AIA       
Sbjct: 156 YAVGLSRMIGGPILPSERSGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNVC 215

Query: 195 ---------LVGVAVQSRFGKLLLE--LGGNNAIIVNEDADLNLAQQCLVFACCGTAGQR 243
                    L+ VAV     K+L +  L G    +    AD+      L F+    A   
Sbjct: 216 LWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCGGADIGKILSKLGFSAVAEASML 275

Query: 244 CTTTRRLFLHKKKIDRPGYFVEPTIVTG--------LPHNSRVVHRETF----------- 284
            T       H      P   V    + G        +  N +     TF           
Sbjct: 276 NTIPHT---HNGGWALPAVAVGTQDLGGGSSYEMIKITSNEQHKTPRTFKSAGTPQIKGC 332

Query: 285 APIVYVFPFDSL------DEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINV 338
           +P   +   DSL      +E   WNNEVKQGLSSSIFTKD+  +F+WLGP+GSDCG++NV
Sbjct: 333 SPKTPLLKLDSLGQRKDEEEVFAWNNEVKQGLSSSIFTKDLGRIFRWLGPKGSDCGIVNV 392

Query: 339 NIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTINHGKEITLAQGIKFE 394
           NIPT+GAEIGGAFGGEK+TGGGRESGSD+WKQY RRST TIN+ K++ LAQGIKF+
Sbjct: 393 NIPTSGAEIGGAFGGEKHTGGGRESGSDAWKQYMRRSTCTINYSKDLPLAQGIKFQ 448

Source: Gorilla gorilla gorilla

Species: Gorilla gorilla

Genus: Gorilla

Family: Hominidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|423316779|ref|ZP_17294684.1| hypothetical protein HMPREF9699_01255 [Bergeyella zoohelcum ATCC 43767] gi|405582870|gb|EKB56852.1| hypothetical protein HMPREF9699_01255 [Bergeyella zoohelcum ATCC 43767]

 Score =  310 bits (794), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 199/503 (39%), Positives = 256/503 (50%), Gaps = 135/503 (26%)

Query: 26  LKELGLSGSVNPGVYDGTSWKANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAY 85
           LK LG+S + N GV  G S+ ANGE I S++P+ G++IA +Q G   DY + +E +  A+
Sbjct: 14  LKNLGIS-TENKGVSYGDSFFANGETIESLSPTDGKSIAKIQLGTAADYEKVMEKAMEAF 72

Query: 86  AAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVG 145
            ++  +PAP+RGE+VRQ G+ LR     LG+LVS EMGK   EG+GEVQE IDICD+AVG
Sbjct: 73  KSFRMMPAPKRGELVRQFGNKLRVHKEDLGKLVSYEMGKSFQEGLGEVQEMIDICDFAVG 132

Query: 146 LSRTYSGSIL-------------------------------------------------P 156
           LSR   G  +                                                 P
Sbjct: 133 LSRQLHGFTMHSERPLHRMYEQYHPMGVVGIISAFNFPVAVWSWNTALAWICGNVTVWKP 192

Query: 157 SERPG-----------HVLLENWNPLGVVGII-----------SAFNFPVAVYGWNAAIA 194
           SE+ G            VL EN  PLG+ G+I                P+  +  + A+ 
Sbjct: 193 SEKVGLCAIACQKIIQDVLKENDMPLGISGVIVGDGEIGNTLVEDKRIPLVSFTGSTAVG 252

Query: 195 L-VGVAVQSRFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLH 253
             VG  V  RFGK +LELGGNNAII+ E+ADL+++    VF   GTAGQRCTTTRRL +H
Sbjct: 253 RKVGAKVAERFGKSILELGGNNAIIITENADLDMSIIGAVFGAVGTAGQRCTTTRRLIIH 312

Query: 254 KK----------------KIDRP-------------------------------GYFVEP 266
           +                 KI  P                                + VE 
Sbjct: 313 ESVYEEVKERLVKAYQQIKIGNPLDENNHVGPLIDKDAVNMYLNAIEKCKAEGGKFIVEG 372

Query: 267 TIVTGLPHNS---------------RVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLS 311
            ++ G  + S                VV  ETFAPI+Y+  +  L+EAIT  N+V QGLS
Sbjct: 373 EVLQGEGYQSGCYVKPCIAEVENHYDVVQHETFAPILYLMKYRDLEEAITMQNDVPQGLS 432

Query: 312 SSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQY 371
           S+I T+++     +L   GSDCG+ NVNI T+GAEIGGAFGGEK TGGGRESGSD WK Y
Sbjct: 433 SAIMTQNLREAELFLSHAGSDCGIANVNIGTSGAEIGGAFGGEKETGGGRESGSDVWKYY 492

Query: 372 CRRSTVTINHGKEITLAQGIKFE 394
            RR T TIN+ KE+ LAQGIKF+
Sbjct: 493 MRRQTNTINYSKELPLAQGIKFD 515

Source: Bergeyella zoohelcum ATCC 43767

Species: Bergeyella zoohelcum

Genus: Bergeyella

Family: Flavobacteriaceae

Order: Flavobacteriales

Class: Flavobacteriia

Phylum: Bacteroidetes

Superkingdom: Bacteria

>gi|406673541|ref|ZP_11080762.1| hypothetical protein HMPREF9700_01304 [Bergeyella zoohelcum CCUG 30536] gi|405586006|gb|EKB59798.1| hypothetical protein HMPREF9700_01304 [Bergeyella zoohelcum CCUG 30536]

 Score =  309 bits (791), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 198/503 (39%), Positives = 255/503 (50%), Gaps = 135/503 (26%)

Query: 26  LKELGLSGSVNPGVYDGTSWKANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAY 85
           LK LG+S + N GV  G S+  NGE I S++P+ G++IA +Q G   DY + +E +  A+
Sbjct: 14  LKNLGIS-TENKGVSYGDSFFGNGETIESLSPTDGKSIAKIQLGTAADYEKVMEKAMEAF 72

Query: 86  AAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVG 145
            ++  +PAP+RGE+VRQ G+ LR     LG+LVS EMGK   EG+GEVQE IDICD+AVG
Sbjct: 73  KSFRMMPAPKRGELVRQFGNKLRAHKEDLGKLVSYEMGKSFQEGLGEVQEMIDICDFAVG 132

Query: 146 LSRTYSGSIL-------------------------------------------------P 156
           LSR   G  +                                                 P
Sbjct: 133 LSRQLHGFTMHSERPLHRMYEQYHPMGVVGIISAFNFPVAVWSWNTALAWICGNVTVWKP 192

Query: 157 SERPG-----------HVLLENWNPLGVVGII-----------SAFNFPVAVYGWNAAIA 194
           SE+ G            VL EN  PLG+ G+I                P+  +  + A+ 
Sbjct: 193 SEKVGLCAIACQKIIQDVLKENNMPLGISGVIVGDGEIGNTLVEDKRIPLVSFTGSTAVG 252

Query: 195 L-VGVAVQSRFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLH 253
             VG  V  RFGK +LELGGNNAII+ E+ADL+++    VF   GTAGQRCTTTRRL +H
Sbjct: 253 RKVGAKVAERFGKSILELGGNNAIIITENADLDMSIIGAVFGAVGTAGQRCTTTRRLIIH 312

Query: 254 KK----------------KIDRP-------------------------------GYFVEP 266
           +                 KI  P                                + VE 
Sbjct: 313 ESVYEEVKERLVKAYQQIKIGNPLDENNHVGPLIDKDAVNMYLNAIEKCKAEGGKFIVEG 372

Query: 267 TIVTGLPHNS---------------RVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLS 311
            ++ G  + S                VV  ETFAPI+Y+  +  L+EAIT  N+V QGLS
Sbjct: 373 EVLQGEGYQSGCYVKPCIAEVENHYDVVQHETFAPILYLMKYRDLEEAITMQNDVPQGLS 432

Query: 312 SSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQY 371
           S+I T+++     +L   GSDCG+ NVNI T+GAEIGGAFGGEK TGGGRESGSD WK Y
Sbjct: 433 SAIMTQNLREAELFLSHAGSDCGIANVNIGTSGAEIGGAFGGEKETGGGRESGSDVWKYY 492

Query: 372 CRRSTVTINHGKEITLAQGIKFE 394
            RR T TIN+ KE+ LAQGIKF+
Sbjct: 493 MRRQTNTINYSKELPLAQGIKFD 515

Source: Bergeyella zoohelcum CCUG 30536

Species: Bergeyella zoohelcum

Genus: Bergeyella

Family: Flavobacteriaceae

Order: Flavobacteriales

Class: Flavobacteriia

Phylum: Bacteroidetes

Superkingdom: Bacteria

>gi|363582410|ref|ZP_09315220.1| l-aminoadipate-semialdehyde dehydrogenase [Flavobacteriaceae bacterium HQM9]

 Score =  307 bits (786), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 194/495 (39%), Positives = 248/495 (50%), Gaps = 135/495 (27%)

Query: 34  SVNPGVYDGTSWKANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPA 93
           S   G   G+ + +  ++I S +P  G  I++++  + + Y + IE +  A+  W  +PA
Sbjct: 17  SSEKGTAYGSQFLSGTDLITSYSPVNGNLISNIECTSSESYKKVIEKAEQAFVKWRTIPA 76

Query: 94  PRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGS 153
           P+RG++VRQ GDALR K   LG LV+ EMGK L EG+GEVQE IDICD+AVGLSR   G 
Sbjct: 77  PKRGDLVRQFGDALREKKQDLGVLVAYEMGKSLQEGLGEVQEMIDICDFAVGLSRQLHGL 136

Query: 154 ILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIA----------------LVG 197
            + SERP H + E ++PLG+VGIISAFNFPVAV+ WN A+A                L  
Sbjct: 137 TMHSERPEHRMYEQYHPLGIVGIISAFNFPVAVWAWNTALAWICGNVTVWKPSEKTPLCA 196

Query: 198 VAVQ-----------------------SRFGKL--------------------------- 207
           +A Q                       ++FGKL                           
Sbjct: 197 IACQKIIAQVLDKNQLPGAISCLLTGGAKFGKLLANDNRVALVSATGSTKMGKSVATSVA 256

Query: 208 ------LLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK------ 255
                 LLELGGNNA+I+  +A+L LA   LVF   GTAGQRCTTTRRL +H+       
Sbjct: 257 ARLGKSLLELGGNNAMIITPNANLQLALTGLVFGAVGTAGQRCTTTRRLIVHEDILNSVI 316

Query: 256 ----------KIDRP---GYFVEPTIVTGLPHN------------------SRVVHRETF 284
                     KI  P      + P I T    N                    V+  +T+
Sbjct: 317 EKLTAAYAQLKIGSPLDEKNHMGPLIDTDAVKNYATTLSEAKKQGATPIVEGEVLTNKTY 376

Query: 285 APIVYVFPF--------------------------DSLDEAITWNNEVKQGLSSSIFTKD 318
           A   YV P                            S+  AI   N V QGLSS+I +++
Sbjct: 377 ASDCYVSPAIYLANNDMAIVQKETFAPILYMIPYSGSITNAIAIQNNVPQGLSSTIMSEN 436

Query: 319 VTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVT 378
           +     +L  QGSDCG+ NVNI T+GAEIGGAFGGEK TGGGRESGSD+WK Y RR T T
Sbjct: 437 IRETELFLSAQGSDCGIANVNIGTSGAEIGGAFGGEKETGGGRESGSDAWKAYMRRQTNT 496

Query: 379 INHGKEITLAQGIKF 393
           IN+  E+ LAQGIKF
Sbjct: 497 INYSTELPLAQGIKF 511

Source: Flavobacteriaceae bacterium HQM9

Species: Flavobacteriaceae bacterium HQM9

Family: Flavobacteriaceae

Order: Flavobacteriales

Class: Flavobacteriia

Phylum: Bacteroidetes

Superkingdom: Bacteria

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	394
WB|WBGene00000115	531	alh-9 [Caenorhabditis elegans	0.441	0.327	0.630	1.7e-133
UNIPROTKB|P46562	531	alh-9 "Putative aldehyde dehyd	0.441	0.327	0.630	1.7e-133
ZFIN|ZDB-GENE-030131-6129	541	aldh7a1 "aldehyde dehydrogenas	0.355	0.258	0.742	1e-131
UNIPROTKB|E1BFG0	539	ALDH7A1 "Alpha-aminoadipic sem	0.355	0.259	0.735	1e-131
UNIPROTKB|Q2KJC9	539	ALDH7A1 "Alpha-aminoadipic sem	0.355	0.259	0.735	1e-131
UNIPROTKB|E2RQ99	539	ALDH7A1 "Uncharacterized prote	0.355	0.259	0.721	2.8e-131
UNIPROTKB|P49419	539	ALDH7A1 "Alpha-aminoadipic sem	0.355	0.259	0.721	2.4e-130
UNIPROTKB|E1C4W4	536	ALDH7A1 "Uncharacterized prote	0.355	0.261	0.714	1.5e-128
UNIPROTKB|F8VS02	475	ALDH7A1 "Alpha-aminoadipic sem	0.492	0.408	0.693	5.5e-128
MGI|MGI:108186	539	Aldh7a1 "aldehyde dehydrogenas	0.355	0.259	0.714	3.5e-127

WB|WBGene00000115 alh-9 [Caenorhabditis elegans (taxid:6239)]

 Score = 563 (203.2 bits), Expect = 1.7e-133, Sum P(3) = 1.7e-133
 Identities = 111/176 (63%), Positives = 130/176 (73%)

Query:    21 SKYPFLKELGLSGSVNPGVYDGTSWKANGEIIPSINPSTGETIASVQQGNVQDYHRCIES 80
             SKY FLKELGL+ + N GV+ G  W A+G+++ S  P+    IA+VQ GNVQDY   I  
Sbjct:    27 SKYGFLKELGLTEN-NAGVFHG-KWAASGQVVQSFAPANNSPIANVQNGNVQDYEIAISE 84

Query:    81 SRXXXXXXXXXXXPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDIC 140
             ++           PRRGEIVRQIGD LR +L  LG+LVSLEMGKI AEG+GEVQE++DIC
Sbjct:    85 AKKAYNDWCEVPAPRRGEIVRQIGDKLRTQLQNLGKLVSLEMGKISAEGVGEVQEYVDIC 144

Query:   141 DYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALV 196
             DYA GLSR+  G I PSERPGH LLE WNPLGVVG+ISAFNFP AVYGWN A+ALV
Sbjct:   145 DYATGLSRSLEGKIFPSERPGHALLEQWNPLGVVGVISAFNFPCAVYGWNNALALV 200

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

UNIPROTKB|P46562 alh-9 "Putative aldehyde dehydrogenase family 7 member A1 homolog" [Caenorhabditis elegans (taxid:6239)]

 Score = 563 (203.2 bits), Expect = 1.7e-133, Sum P(3) = 1.7e-133
 Identities = 111/176 (63%), Positives = 130/176 (73%)

Query:    21 SKYPFLKELGLSGSVNPGVYDGTSWKANGEIIPSINPSTGETIASVQQGNVQDYHRCIES 80
             SKY FLKELGL+ + N GV+ G  W A+G+++ S  P+    IA+VQ GNVQDY   I  
Sbjct:    27 SKYGFLKELGLTEN-NAGVFHG-KWAASGQVVQSFAPANNSPIANVQNGNVQDYEIAISE 84

Query:    81 SRXXXXXXXXXXXPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDIC 140
             ++           PRRGEIVRQIGD LR +L  LG+LVSLEMGKI AEG+GEVQE++DIC
Sbjct:    85 AKKAYNDWCEVPAPRRGEIVRQIGDKLRTQLQNLGKLVSLEMGKISAEGVGEVQEYVDIC 144

Query:   141 DYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALV 196
             DYA GLSR+  G I PSERPGH LLE WNPLGVVG+ISAFNFP AVYGWN A+ALV
Sbjct:   145 DYATGLSRSLEGKIFPSERPGHALLEQWNPLGVVGVISAFNFPCAVYGWNNALALV 200

GO:0005575 "cellular_component" evidence=ND

GO:0006081 "cellular aldehyde metabolic process" evidence=ISS

GO:0004029 "aldehyde dehydrogenase (NAD) activity" evidence=ISS

ZFIN|ZDB-GENE-030131-6129 aldh7a1 "aldehyde dehydrogenase 7 family, member A1" [Danio rerio (taxid:7955)]

 Score = 586 (211.3 bits), Expect = 1.0e-131, Sum P(3) = 1.0e-131
 Identities = 104/140 (74%), Positives = 124/140 (88%)

Query:   255 KKIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSI 314
             K +DRPG +VEPTI+TGLPHN+ +VH ETF PI+YV  F + +EA +WNNEVKQGLSSSI
Sbjct:   402 KIMDRPGNYVEPTIITGLPHNASIVHTETFVPILYVLKFKTEEEAFSWNNEVKQGLSSSI 461

Query:   315 FTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRR 374
             FTKD+  +F+WLGP+GSDCG++NVNIPT+GAEIGGAFGGEK+TGGGRESGSDSWKQY RR
Sbjct:   462 FTKDMGRVFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDSWKQYMRR 521

Query:   375 STVTINHGKEITLAQGIKFE 394
             ST TIN+ K++ LAQGIKFE
Sbjct:   522 STCTINYSKDLPLAQGIKFE 541

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016620 "oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

UNIPROTKB|E1BFG0 ALDH7A1 "Alpha-aminoadipic semialdehyde dehydrogenase" [Bos taurus (taxid:9913)]

 Score = 579 (208.9 bits), Expect = 1.0e-131, Sum P(3) = 1.0e-131
 Identities = 103/140 (73%), Positives = 123/140 (87%)

Query:   255 KKIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSI 314
             K +DRPG +VEPTIVTGL H++ +VH ETFAPI+YVF F + DE   WNNEVKQGLSSSI
Sbjct:   400 KVMDRPGNYVEPTIVTGLDHDASIVHTETFAPILYVFKFKNEDEVFAWNNEVKQGLSSSI 459

Query:   315 FTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRR 374
             FTKD+  +F+WLGP+GSDCG++NVNIPT+GAEIGGAFGGEK+TGGGRESGSD+WKQY RR
Sbjct:   460 FTKDMGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDAWKQYMRR 519

Query:   375 STVTINHGKEITLAQGIKFE 394
             ST TIN+ K++ LAQGIKF+
Sbjct:   520 STCTINYSKDLPLAQGIKFQ 539

GO:0005739 "mitochondrion" evidence=IEA

GO:0004043 "L-aminoadipate-semialdehyde dehydrogenase activity" evidence=IEA

UNIPROTKB|Q2KJC9 ALDH7A1 "Alpha-aminoadipic semialdehyde dehydrogenase" [Bos taurus (taxid:9913)]

 Score = 579 (208.9 bits), Expect = 1.0e-131, Sum P(3) = 1.0e-131
 Identities = 103/140 (73%), Positives = 123/140 (87%)

Query:   255 KKIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSI 314
             K +DRPG +VEPTIVTGL H++ +VH ETFAPI+YVF F + DE   WNNEVKQGLSSSI
Sbjct:   400 KVMDRPGNYVEPTIVTGLDHDASIVHTETFAPILYVFKFKNEDEVFAWNNEVKQGLSSSI 459

Query:   315 FTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRR 374
             FTKD+  +F+WLGP+GSDCG++NVNIPT+GAEIGGAFGGEK+TGGGRESGSD+WKQY RR
Sbjct:   460 FTKDMGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDAWKQYMRR 519

Query:   375 STVTINHGKEITLAQGIKFE 394
             ST TIN+ K++ LAQGIKF+
Sbjct:   520 STCTINYSKDLPLAQGIKFQ 539

GO:0019285 "glycine betaine biosynthetic process from choline" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0008802 "betaine-aldehyde dehydrogenase activity" evidence=IEA

GO:0004043 "L-aminoadipate-semialdehyde dehydrogenase activity" evidence=IEA

UNIPROTKB|E2RQ99 ALDH7A1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 575 (207.5 bits), Expect = 2.8e-131, Sum P(3) = 2.8e-131
 Identities = 101/140 (72%), Positives = 122/140 (87%)

Query:   255 KKIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSI 314
             K +DRPG +VEPT+VTGL HN+ + H ETFAPI+YVF F + +E   WNNEVKQGLSSSI
Sbjct:   400 KVMDRPGNYVEPTVVTGLAHNASIAHTETFAPILYVFKFKNEEEVFAWNNEVKQGLSSSI 459

Query:   315 FTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRR 374
             FTKD+  +F+WLGP+GSDCG++NVNIPT+GAEIGGAFGGEK+TGGGRESGSD+WKQY RR
Sbjct:   460 FTKDLGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDAWKQYMRR 519

Query:   375 STVTINHGKEITLAQGIKFE 394
             ST TIN+ K++ LAQGIKF+
Sbjct:   520 STCTINYSKDLPLAQGIKFQ 539

GO:0005739 "mitochondrion" evidence=IEA

GO:0004043 "L-aminoadipate-semialdehyde dehydrogenase activity" evidence=IEA

UNIPROTKB|P49419 ALDH7A1 "Alpha-aminoadipic semialdehyde dehydrogenase" [Homo sapiens (taxid:9606)]

 Score = 570 (205.7 bits), Expect = 2.4e-130, Sum P(3) = 2.4e-130
 Identities = 101/140 (72%), Positives = 122/140 (87%)

Query:   255 KKIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSI 314
             K +DRPG +VEPTIVTGL H++ + H ETFAPI+YVF F + +E   WNNEVKQGLSSSI
Sbjct:   400 KVMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFKNEEEVFAWNNEVKQGLSSSI 459

Query:   315 FTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRR 374
             FTKD+  +F+WLGP+GSDCG++NVNIPT+GAEIGGAFGGEK+TGGGRESGSD+WKQY RR
Sbjct:   460 FTKDLGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDAWKQYMRR 519

Query:   375 STVTINHGKEITLAQGIKFE 394
             ST TIN+ K++ LAQGIKF+
Sbjct:   520 STCTINYSKDLPLAQGIKFQ 539

GO:0008802 "betaine-aldehyde dehydrogenase activity" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0019285 "glycine betaine biosynthetic process from choline" evidence=IEA

GO:0004029 "aldehyde dehydrogenase (NAD) activity" evidence=ISS

GO:0006081 "cellular aldehyde metabolic process" evidence=ISS

GO:0007605 "sensory perception of sound" evidence=TAS

GO:0004043 "L-aminoadipate-semialdehyde dehydrogenase activity" evidence=EXP

GO:0005759 "mitochondrial matrix" evidence=TAS

GO:0006554 "lysine catabolic process" evidence=TAS

GO:0034641 "cellular nitrogen compound metabolic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

GO:0005737 "cytoplasm" evidence=IDA

GO:0005739 "mitochondrion" evidence=IDA

UNIPROTKB|E1C4W4 ALDH7A1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 560 (202.2 bits), Expect = 1.5e-128, Sum P(3) = 1.5e-128
 Identities = 100/140 (71%), Positives = 120/140 (85%)

Query:   255 KKIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSI 314
             K I+RPG +VEPTIVTGL HN+ +VH ETFAPI+YV  F   +E   WNNEVKQGLSSSI
Sbjct:   397 KVINRPGNYVEPTIVTGLAHNAPIVHTETFAPILYVLKFKEEEEVFAWNNEVKQGLSSSI 456

Query:   315 FTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRR 374
             FT+D+  +F+WLGP+GSDCG++NVNIPT+GAEIGGAFGGEK+TGGGRESGSDSWK Y +R
Sbjct:   457 FTRDLGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDSWKLYMKR 516

Query:   375 STVTINHGKEITLAQGIKFE 394
             ST TIN+ K++ LAQGIKF+
Sbjct:   517 STCTINYSKDLPLAQGIKFQ 536

GO:0004043 "L-aminoadipate-semialdehyde dehydrogenase activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

UNIPROTKB|F8VS02 ALDH7A1 "Alpha-aminoadipic semialdehyde dehydrogenase" [Homo sapiens (taxid:9606)]

 Score = 735 (263.8 bits), Expect = 5.5e-128, Sum P(2) = 5.5e-128
 Identities = 138/199 (69%), Positives = 163/199 (81%)

Query:   196 VGVAVQSRFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK 255
             VG+ VQ RFG+ LLELGGNNAII  EDADL+L     +FA  GTAGQRCTT RRL +   
Sbjct:   282 VGLMVQERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLVM--- 338

Query:   256 KIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIF 315
               DRPG +VEPTIVTGL H++ + H ETFAPI+YVF F + +E   WNNEVKQGLSSSIF
Sbjct:   339 --DRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFKNEEEVFAWNNEVKQGLSSSIF 396

Query:   316 TKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRS 375
             TKD+  +F+WLGP+GSDCG++NVNIPT+GAEIGGAFGGEK+TGGGRESGSD+WKQY RRS
Sbjct:   397 TKDLGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDAWKQYMRRS 456

Query:   376 TVTINHGKEITLAQGIKFE 394
             T TIN+ K++ LAQGIKF+
Sbjct:   457 TCTINYSKDLPLAQGIKFQ 475

GO:0016620 "oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor" evidence=IEA

MGI|MGI:108186 Aldh7a1 "aldehyde dehydrogenase family 7, member A1" [Mus musculus (taxid:10090)]

 Score = 562 (202.9 bits), Expect = 3.5e-127, Sum P(3) = 3.5e-127
 Identities = 100/140 (71%), Positives = 120/140 (85%)

Query:   255 KKIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSI 314
             K +D PG +VEPTIVTGL H++ +VH+ETFAPI+YVF F   +E   WNNEVKQGLSSSI
Sbjct:   400 KVMDHPGNYVEPTIVTGLAHDAPIVHQETFAPILYVFKFQDEEEVFEWNNEVKQGLSSSI 459

Query:   315 FTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRR 374
             FTKD+  +F+WLGP+GSDCG++NVNIPT+GAEIGGAFGGEK+TGGGRESGSD+WKQY RR
Sbjct:   460 FTKDLGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDAWKQYMRR 519

Query:   375 STVTINHGKEITLAQGIKFE 394
             ST TIN+   + LAQGIKF+
Sbjct:   520 STCTINYSTSLPLAQGIKFQ 539

GO:0004029 "aldehyde dehydrogenase (NAD) activity" evidence=IEA

GO:0004043 "L-aminoadipate-semialdehyde dehydrogenase activity" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005739 "mitochondrion" evidence=IDA

GO:0008152 "metabolic process" evidence=IEA

GO:0008802 "betaine-aldehyde dehydrogenase activity" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016620 "oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P46562	AL7A1_CAEEL	1, ., 2, ., 1, ., 3	0.5402	0.5076	0.3766	yes	N/A
Q9SYG7	AL7B4_ARATH	1, ., 2, ., 1, ., 3	0.5795	0.4441	0.3444	yes	N/A
Q9DBF1	AL7A1_MOUSE	1, ., 2, ., 1, ., 8	0.5271	0.5050	0.3692	yes	N/A
Q2KJC9	AL7A1_BOVIN	1, ., 2, ., 1, ., 8	0.6285	0.4390	0.3209	yes	N/A
Q64057	AL7A1_RAT	1, ., 2, ., 1, ., 8	0.5232	0.5050	0.3692	yes	N/A

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.2.1	0.921

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	394
cd07130	474	cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-amin	0.0
cd07086	478	cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha	1e-178
PLN02315	508	PLN02315, PLN02315, aldehyde dehydrogenase family	1e-84
PLN02315	508	PLN02315, PLN02315, aldehyde dehydrogenase family	2e-80
cd06534	367	cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehyd	1e-51
pfam00171	459	pfam00171, Aldedh, Aldehyde dehydrogenase family	5e-42
pfam00171	459	pfam00171, Aldedh, Aldehyde dehydrogenase family	9e-42
COG1012	472	COG1012, PutA, NAD-dependent aldehyde dehydrogenas	6e-37
cd07088	468	cd07088, ALDH_LactADH-AldA, Escherichia coli lacta	6e-36
cd07131	478	cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candi	8e-36
cd07097	473	cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+	3e-34
cd07078	432	cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrog	6e-34
cd07078	432	cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrog	2e-32
COG1012	472	COG1012, PutA, NAD-dependent aldehyde dehydrogenas	1e-30
cd06534	367	cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehyd	2e-29
cd07131	478	cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candi	1e-26
cd07099	453	cd07099, ALDH_DDALDH, Methylomonas sp	1e-26
cd07103	451	cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succina	5e-25
cd07146	451	cd07146, ALDH_PhpJ, Streptomyces putative phosphon	1e-24
cd07104	431	cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P)	2e-24
cd07085	478	cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyd	3e-24
cd07094	453	cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NA	1e-23
cd07149	453	cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) wi	2e-23
TIGR01804	467	TIGR01804, BADH, glycine betaine aldehyde dehydrog	9e-23
cd07108	457	cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-d	4e-22
cd07124	512	cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-	7e-22
cd07114	457	cd07114, ALDH_DhaS, Uncharacterized Candidatus pel	2e-21
cd07100	429	cd07100, ALDH_SSADH1_GabD1, Mycobacterium tubercul	3e-21
cd07150	451	cd07150, ALDH_VaniDH_like, Pseudomonas putida vani	3e-21
cd07106	446	cd07106, ALDH_AldA-AAD23400, Streptomyces aureofac	5e-21
PLN02278	498	PLN02278, PLN02278, succinic semialdehyde dehydrog	6e-21
cd07106	446	cd07106, ALDH_AldA-AAD23400, Streptomyces aureofac	8e-21
cd07115	453	cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens	3e-20
cd07103	451	cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succina	4e-20
cd07147	452	cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase f	6e-20
cd07095	431	cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-sem	7e-20
cd07119	482	cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-de	4e-19
cd07151	465	cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxyb	5e-19
cd07141	481	cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retin	7e-19
cd07093	455	cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogen	7e-19
cd07150	451	cd07150, ALDH_VaniDH_like, Pseudomonas putida vani	8e-19
cd07107	456	cd07107, ALDH_PhdK-like, Nocardioides 2-carboxyben	9e-19
cd07092	450	cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-d	1e-18
PRK13252	488	PRK13252, PRK13252, betaine aldehyde dehydrogenase	2e-18
cd07125	518	cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-car	5e-18
PRK13968	462	PRK13968, PRK13968, putative succinate semialdehyd	7e-18
cd07142	476	cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogen	8e-18
cd07097	473	cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+	9e-18
PLN02466	538	PLN02466, PLN02466, aldehyde dehydrogenase family	1e-17
cd07110	456	cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehy	1e-17
cd07152	443	cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde	2e-17
cd07109	454	cd07109, ALDH_AAS00426, Uncharacterized Saccharopo	3e-17
PRK13473	475	PRK13473, PRK13473, gamma-aminobutyraldehyde dehyd	3e-17
cd07114	457	cd07114, ALDH_DhaS, Uncharacterized Candidatus pel	5e-17
PRK11905	1208	PRK11905, PRK11905, bifunctional proline dehydroge	7e-17
cd07112	462	cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+	8e-17
cd07124	512	cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-	9e-17
cd07120	455	cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida al	2e-16
TIGR03216	481	TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semia	2e-16
cd07089	459	cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6-	2e-16
PRK11241	482	PRK11241, gabD, succinate-semialdehyde dehydrogena	3e-16
cd07090	457	cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethy	4e-16
TIGR01780	448	TIGR01780, SSADH, succinate-semialdehyde dehydroge	4e-16
cd07109	454	cd07109, ALDH_AAS00426, Uncharacterized Saccharopo	5e-16
TIGR01722	477	TIGR01722, MMSDH, methylmalonic acid semialdehyde	5e-16
cd07149	453	cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) wi	7e-16
cd07113	477	cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dep	7e-16
cd07151	465	cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxyb	9e-16
PRK11904	1038	PRK11904, PRK11904, bifunctional proline dehydroge	1e-15
cd07145	456	cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcu	1e-15
cd07104	431	cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P)	2e-15
cd07115	453	cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens	2e-15
cd07093	455	cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogen	2e-15
COG4230	769	COG4230, COG4230, Delta 1-pyrroline-5-carboxylate	2e-15
cd07088	468	cd07088, ALDH_LactADH-AldA, Escherichia coli lacta	3e-15
cd07144	484	cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisi	3e-15
cd07099	453	cd07099, ALDH_DDALDH, Methylomonas sp	4e-15
cd07091	476	cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH	4e-15
TIGR01237	511	TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carb	4e-15
cd07147	452	cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase f	5e-15
TIGR02299	488	TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate	5e-15
cd07108	457	cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-d	1e-14
cd07144	484	cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisi	1e-14
cd07101	454	cd07101, ALDH_SSADH2_GabD2, Mycobacterium tubercul	1e-14
cd07082	473	cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-ph	1e-14
TIGR03374	472	TIGR03374, ABALDH, 1-pyrroline dehydrogenase	2e-14
cd07091	476	cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH	3e-14
TIGR02299	488	TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate	3e-14
cd07118	454	cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbos	3e-14
cd07140	486	cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate	3e-14
cd07139	471	cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculo	4e-14
PRK09407	524	PRK09407, gabD2, succinic semialdehyde dehydrogena	4e-14
cd07138	466	cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-ox	6e-14
cd07143	481	cd07143, ALDH_AldA_AN0554, Aspergillus nidulans al	8e-14
PLN02467	503	PLN02467, PLN02467, betaine aldehyde dehydrogenase	9e-14
cd07113	477	cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dep	1e-13
cd07083	500	cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent	1e-13
cd07090	457	cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethy	2e-13
TIGR01780	448	TIGR01780, SSADH, succinate-semialdehyde dehydroge	2e-13
cd07118	454	cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbos	2e-13
cd07139	471	cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculo	2e-13
PLN02766	501	PLN02766, PLN02766, coniferyl-aldehyde dehydrogena	3e-13
PLN02467	503	PLN02467, PLN02467, betaine aldehyde dehydrogenase	4e-13
TIGR01238	500	TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carb	4e-13
cd07111	480	cd07111, ALDH_F16, Aldehyde dehydrogenase family 1	4e-13
PLN02278	498	PLN02278, PLN02278, succinic semialdehyde dehydrog	6e-13
cd07100	429	cd07100, ALDH_SSADH1_GabD1, Mycobacterium tubercul	8e-13
cd07152	443	cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde	8e-13
TIGR03250	472	TIGR03250, PhnAcAld_DH, putative phosphonoacetalde	8e-13
cd07145	456	cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcu	9e-13
PRK10090	409	PRK10090, PRK10090, aldehyde dehydrogenase A; Prov	9e-13
PRK03137	514	PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehy	9e-13
cd07101	454	cd07101, ALDH_SSADH2_GabD2, Mycobacterium tubercul	1e-12
cd07107	456	cd07107, ALDH_PhdK-like, Nocardioides 2-carboxyben	2e-12
cd07112	462	cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+	2e-12
PRK09407	524	PRK09407, gabD2, succinic semialdehyde dehydrogena	2e-12
TIGR04284	480	TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase,	2e-12
PLN00412	496	PLN00412, PLN00412, NADP-dependent glyceraldehyde-	2e-12
cd07559	480	cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophu	3e-12
TIGR03240	484	TIGR03240, arg_catab_astD, succinylglutamic semial	3e-12
PRK09406	457	PRK09406, gabD1, succinic semialdehyde dehydrogena	3e-12
cd07117	475	cd07117, ALDH_StaphAldA1, Uncharacterized Staphylo	3e-12
PRK09457	487	PRK09457, astD, succinylglutamic semialdehyde dehy	3e-12
cd07105	432	cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogena	4e-12
cd07089	459	cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6-	5e-12
cd07559	480	cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophu	7e-12
cd07117	475	cd07117, ALDH_StaphAldA1, Uncharacterized Staphylo	8e-12
cd07097	473	cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+	1e-11
TIGR01804	467	TIGR01804, BADH, glycine betaine aldehyde dehydrog	1e-11
cd07111	480	cd07111, ALDH_F16, Aldehyde dehydrogenase family 1	1e-11
cd07131	478	cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candi	2e-11
cd07102	452	cd07102, ALDH_EDX86601, Uncharacterized aldehyde d	2e-11
PLN02419	604	PLN02419, PLN02419, methylmalonate-semialdehyde de	2e-11
cd07098	465	cd07098, ALDH_F15-22, Aldehyde dehydrogenase famil	3e-11
cd07142	476	cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogen	5e-11
cd07092	450	cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-d	9e-11
cd07119	482	cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-de	1e-10
PRK13473	475	PRK13473, PRK13473, gamma-aminobutyraldehyde dehyd	1e-10
PRK11241	482	PRK11241, gabD, succinate-semialdehyde dehydrogena	1e-10
TIGR03374	472	TIGR03374, ABALDH, 1-pyrroline dehydrogenase	2e-10
TIGR03250	472	TIGR03250, PhnAcAld_DH, putative phosphonoacetalde	2e-10
PRK11809	1318	PRK11809, putA, trifunctional transcriptional regu	2e-10
cd07135	436	cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisia	3e-10
cd07082	473	cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-ph	4e-10
cd07116	479	cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD	5e-10
cd07120	455	cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida al	8e-10
TIGR01237	511	TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carb	1e-09
cd07095	431	cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-sem	2e-09
cd07140	486	cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate	4e-09
PRK09407	524	PRK09407, gabD2, succinic semialdehyde dehydrogena	4e-09
cd07110	456	cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehy	5e-09
PRK13252	488	PRK13252, PRK13252, betaine aldehyde dehydrogenase	6e-09
cd07143	481	cd07143, ALDH_AldA_AN0554, Aspergillus nidulans al	7e-09
cd07101	454	cd07101, ALDH_SSADH2_GabD2, Mycobacterium tubercul	8e-09
PRK10090	409	PRK10090, PRK10090, aldehyde dehydrogenase A; Prov	1e-08
cd07138	466	cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-ox	2e-08
cd07116	479	cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD	2e-08
cd07136	449	cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldeh	2e-08
cd07102	452	cd07102, ALDH_EDX86601, Uncharacterized aldehyde d	4e-08
cd07088	468	cd07088, ALDH_LactADH-AldA, Escherichia coli lacta	1e-07
cd07110	456	cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehy	1e-07
cd07152	443	cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde	1e-07
cd07093	455	cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogen	2e-07
TIGR03240	484	TIGR03240, arg_catab_astD, succinylglutamic semial	2e-07
cd07114	457	cd07114, ALDH_DhaS, Uncharacterized Candidatus pel	3e-07
cd07105	432	cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogena	3e-07
cd07085	478	cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyd	4e-07
PRK03137	514	PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehy	5e-07
PTZ00381	493	PTZ00381, PTZ00381, aldehyde dehydrogenase family	6e-07
TIGR01722	477	TIGR01722, MMSDH, methylmalonic acid semialdehyde	1e-06
PRK03137	514	PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehy	1e-06
cd07103	451	cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succina	2e-06
PRK09457	487	PRK09457, astD, succinylglutamic semialdehyde dehy	2e-06
cd07134	433	cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehy	2e-06
PRK09847	494	PRK09847, PRK09847, gamma-glutamyl-gamma-aminobuty	2e-06
PRK09847	494	PRK09847, PRK09847, gamma-glutamyl-gamma-aminobuty	2e-06
cd07087	426	cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily:	2e-06
cd07125	518	cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-car	3e-06
cd07083	500	cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent	3e-06
TIGR04284	480	TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase,	4e-06
cd07148	455	cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL031	4e-06
cd07128	513	cd07128, ALDH_MaoC-N, N-terminal domain of the mon	8e-06
cd07118	454	cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbos	1e-05
PLN02419	604	PLN02419, PLN02419, methylmalonate-semialdehyde de	1e-05
TIGR03216	481	TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semia	2e-05
cd07148	455	cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL031	2e-05
cd07132	443	cd07132, ALDH_F3AB, Aldehyde dehydrogenase family	3e-05
cd07139	471	cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculo	4e-05
cd07083	500	cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent	4e-05
cd07105	432	cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogena	4e-05
PRK10090	409	PRK10090, PRK10090, aldehyde dehydrogenase A; Prov	5e-05
PRK09406	457	PRK09406, gabD1, succinic semialdehyde dehydrogena	7e-05
cd07102	452	cd07102, ALDH_EDX86601, Uncharacterized aldehyde d	8e-05
cd07090	457	cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethy	9e-05
cd07133	434	cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehyd	1e-04
TIGR01236	532	TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carb	1e-04
PLN00412	496	PLN00412, PLN00412, NADP-dependent glyceraldehyde-	2e-04
TIGR03240	484	TIGR03240, arg_catab_astD, succinylglutamic semial	2e-04
PRK13968	462	PRK13968, PRK13968, putative succinate semialdehyd	3e-04
cd07144	484	cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisi	4e-04
cd07123	522	cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-ca	4e-04
cd07098	465	cd07098, ALDH_F15-22, Aldehyde dehydrogenase famil	5e-04
TIGR01236	532	TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carb	5e-04
cd07133	434	cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehyd	8e-04
cd07108	457	cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-d	9e-04
PRK13252	488	PRK13252, PRK13252, betaine aldehyde dehydrogenase	0.002
cd07112	462	cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+	0.002
PLN00412	496	PLN00412, PLN00412, NADP-dependent glyceraldehyde-	0.002
PRK09457	487	PRK09457, astD, succinylglutamic semialdehyde dehy	0.002
PRK11241	482	PRK11241, gabD, succinate-semialdehyde dehydrogena	0.003
PRK09406	457	PRK09406, gabD1, succinic semialdehyde dehydrogena	0.003
cd07098	465	cd07098, ALDH_F15-22, Aldehyde dehydrogenase famil	0.003
cd07087	426	cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily:	0.003
cd07084	442	cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+	0.004

>gnl|CDD|143448 cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B

 Score =  540 bits (1393), Expect = 0.0
 Identities = 213/475 (44%), Positives = 263/475 (55%), Gaps = 131/475 (27%)

Query: 38  GVYDGTSWKANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRG 97
           GVYDG  W   G ++ SI+P+ GE IA V+Q   +DY   I++++ A+  W  +PAP+RG
Sbjct: 1   GVYDGE-WGGGGGVVTSISPANGEPIARVRQATPEDYESTIKAAQEAFKEWRDVPAPKRG 59

Query: 98  EIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPS 157
           EIVRQIGDALR K   LG+LVSLEMGKIL EG+GEVQE IDICD+AVGLSR   G  +PS
Sbjct: 60  EIVRQIGDALRKKKEALGKLVSLEMGKILPEGLGEVQEMIDICDFAVGLSRQLYGLTIPS 119

Query: 158 ERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALV----------------GVAVQ 201
           ERPGH ++E WNPLGVVG+I+AFNFPVAV+GWNAAIALV                 +AV 
Sbjct: 120 ERPGHRMMEQWNPLGVVGVITAFNFPVAVWGWNAAIALVCGNVVVWKPSPTTPLTAIAVT 179

Query: 202 SRFGKLLLELGGNNAI------------IVNEDADLNL---------------------- 227
               ++L + G   AI             + +D  + L                      
Sbjct: 180 KIVARVLEKNGLPGAIASLVCGGADVGEALVKDPRVPLVSFTGSTAVGRQVGQAVAARFG 239

Query: 228 ----------------------AQQCLVFACCGTAGQRCTTTRRLFLHKKKIDR------ 259
                                 A + ++FA  GTAGQRCTTTRRL +H+   D       
Sbjct: 240 RSLLELGGNNAIIVMEDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESIYDEVLERLK 299

Query: 260 -------------PGYFVEP----------------------TIVTG------------- 271
                         G  V P                      T++ G             
Sbjct: 300 KAYKQVRIGDPLDDGTLVGPLHTKAAVDNYLAAIEEAKSQGGTVLFGGKVIDGPGNYVEP 359

Query: 272 ----LPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLG 327
                  ++ +V  ETFAPI+YV  FD+L+EAI WNNEV QGLSSSIFT D+ N F+WLG
Sbjct: 360 TIVEGLSDAPIVKEETFAPILYVLKFDTLEEAIAWNNEVPQGLSSSIFTTDLRNAFRWLG 419

Query: 328 PQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTINHG 382
           P+GSDCG++NVNI T+GAEIGGAFGGEK TGGGRESGSD+WKQY RRST TIN+ 
Sbjct: 420 PKGSDCGIVNVNIGTSGAEIGGAFGGEKETGGGRESGSDAWKQYMRRSTCTINYS 474

Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. Length = 474

>gnl|CDD|143405 cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins

 Score =  505 bits (1303), Expect = e-178
 Identities = 210/478 (43%), Positives = 257/478 (53%), Gaps = 133/478 (27%)

Query: 38  GVYDGTSWKANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRG 97
           GV  G    + GE   S NP+ GE IA V   + +D    + ++R A+  W  +PAPRRG
Sbjct: 1   GVIGGEWVGSGGETFTSRNPANGEPIARVFPASPEDVEAAVAAAREAFKEWRKVPAPRRG 60

Query: 98  EIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPS 157
           EIVRQIG+ALR K   LG+LVSLEMGKIL EG+GEVQE IDICDYAVGLSR   G  +PS
Sbjct: 61  EIVRQIGEALRKKKEALGRLVSLEMGKILPEGLGEVQEMIDICDYAVGLSRMLYGLTIPS 120

Query: 158 ERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALV----------------GVAVQ 201
           ERPGH L+E WNPLGVVG+I+AFNFPVAV GWNAAIALV                 +AV 
Sbjct: 121 ERPGHRLMEQWNPLGVVGVITAFNFPVAVPGWNAAIALVCGNTVVWKPSETTPLTAIAVT 180

Query: 202 SRFGKLLLELGGNNAII------------VNEDADLNL---------------------- 227
               ++L + G    ++            +  D  + L                      
Sbjct: 181 KILAEVLEKNGLPPGVVNLVTGGGDGGELLVHDPRVPLVSFTGSTEVGRRVGETVARRFG 240

Query: 228 ----------------------AQQCLVFACCGTAGQRCTTTRRLFLHKKKIDR------ 259
                                 A + ++FA  GTAGQRCTTTRRL +H+   D       
Sbjct: 241 RVLLELGGNNAIIVMDDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESVYDEFLERLV 300

Query: 260 -------------PGYFVEP----------------------TIVTG------------- 271
                         G  V P                      T++TG             
Sbjct: 301 KAYKQVRIGDPLDEGTLVGPLINQAAVEKYLNAIEIAKSQGGTVLTGGKRIDGGEPGNYV 360

Query: 272 -------LPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFK 324
                  +  ++R+V  ETFAPI+YV  FDSL+EAI  NN+V QGLSSSIFT+D+   F+
Sbjct: 361 EPTIVTGVTDDARIVQEETFAPILYVIKFDSLEEAIAINNDVPQGLSSSIFTEDLREAFR 420

Query: 325 WLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTINHG 382
           WLGP+GSDCG++NVNIPT+GAEIGGAFGGEK TGGGRESGSD+WKQY RRST TIN+ 
Sbjct: 421 WLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGGRESGSDAWKQYMRRSTCTINYS 478

ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). Length = 478

>gnl|CDD|177949 PLN02315, PLN02315, aldehyde dehydrogenase family 7 member

 Score =  266 bits (681), Expect = 1e-84
 Identities = 128/257 (49%), Positives = 154/257 (59%), Gaps = 58/257 (22%)

Query: 195 LVGVAVQSRFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHK 254
           +V   V +RFGK LLEL GNNAIIV +DAD+ LA + ++FA  GTAGQRCTT RRL LH+
Sbjct: 251 MVQQTVNARFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLLLHE 310

Query: 255 K----------------KIDRP---GYFVEP----------------------TIVTG-- 271
                            KI  P   G  + P                       I+TG  
Sbjct: 311 SIYDDVLEQLLTVYKQVKIGDPLEKGTLLGPLHTPESKKNFEKGIEIIKSQGGKILTGGS 370

Query: 272 ---------------LPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFT 316
                          +  ++ VV  E F P++YV  F +L+EAI  NN V QGLSSSIFT
Sbjct: 371 AIESEGNFVQPTIVEISPDADVVKEELFGPVLYVMKFKTLEEAIEINNSVPQGLSSSIFT 430

Query: 317 KDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRST 376
           ++   +FKW+GP GSDCG++NVNIPTNGAEIGGAFGGEK TGGGRE+GSDSWKQY RRST
Sbjct: 431 RNPETIFKWIGPLGSDCGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRST 490

Query: 377 VTINHGKEITLAQGIKF 393
            TIN+G E+ LAQGI F
Sbjct: 491 CTINYGNELPLAQGINF 507

Length = 508

>gnl|CDD|177949 PLN02315, PLN02315, aldehyde dehydrogenase family 7 member

 Score =  255 bits (652), Expect = 2e-80
 Identities = 108/175 (61%), Positives = 135/175 (77%), Gaps = 1/175 (0%)

Query: 22  KYPFLKELGLSGSVNPGVYDGTSWKANGEIIPSINPSTGETIASVQQGNVQDYHRCIESS 81
           +Y FL E+GLS S N G Y G  W+ANG ++ S+NP+  + IA V + +++DY   + + 
Sbjct: 7   EYEFLSEIGLS-SRNLGCYVGGEWRANGPLVSSVNPANNQPIAEVVEASLEDYEEGLRAC 65

Query: 82  RAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICD 141
             A   W  +PAP+RGEIVRQIGDALR KL  LG+LVSLEMGKILAEGIGEVQE ID+CD
Sbjct: 66  EEAAKIWMQVPAPKRGEIVRQIGDALRAKLDYLGRLVSLEMGKILAEGIGEVQEIIDMCD 125

Query: 142 YAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALV 196
           +AVGLSR  +GSI+PSERP H+++E WNPLG+VG+I+AFNFP AV GWNA IALV
Sbjct: 126 FAVGLSRQLNGSIIPSERPNHMMMEVWNPLGIVGVITAFNFPCAVLGWNACIALV 180

Length = 508

>gnl|CDD|143395 cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehydrogenase superfamily

 Score =  176 bits (448), Expect = 1e-51
 Identities = 62/194 (31%), Positives = 94/194 (48%), Gaps = 7/194 (3%)

Query: 188 GWNAAIALVGVAVQSRFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTT 247
           G  A    +  A       + LELGG + +IV+EDADL+ A +  VF     AGQ CT  
Sbjct: 179 GSTAVGKAIMKAAAENLKPVTLELGGKSPVIVDEDADLDAAVEGAVFGAFFNAGQICTAA 238

Query: 248 RRLFLHKKKIDRPGYFVEP--TIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNE 305
            RL +H+   D    FVE   T++  +  +  +   E F P++ V  F   +EAI   N+
Sbjct: 239 SRLLVHESIYDE---FVEKLVTVLVDVDPDMPIAQEEIFGPVLPVIRFKDEEEAIALAND 295

Query: 306 VKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGS 365
            + GL++ +FT+D+    +    +    G + +N  + G      FGG K +G GRE G 
Sbjct: 296 TEYGLTAGVFTRDLNRALRVA--ERLRAGTVYINDSSIGVGPEAPFGGVKNSGIGREGGP 353

Query: 366 DSWKQYCRRSTVTI 379
              ++Y R  TV I
Sbjct: 354 YGLEEYTRTKTVVI 367

The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-L) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. The ALDH-like group is represented by such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 367

>gnl|CDD|215767 pfam00171, Aldedh, Aldehyde dehydrogenase family

 Score =  153 bits (388), Expect = 5e-42
 Identities = 61/151 (40%), Positives = 81/151 (53%), Gaps = 1/151 (0%)

Query: 46  KANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGD 105
            ++ E I  INP+TGE IA+V     +D    + ++RAA+ AWA  P   R  I+ +  D
Sbjct: 3   DSSSETIEVINPATGEVIATVPAATAEDVDAAVAAARAAFKAWAKTPPSERAAILLKAAD 62

Query: 106 ALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLL 165
            L  +   L +L +LE GK LAE  GEV   ID   Y  GL+R   G  LPS  PG +  
Sbjct: 63  LLEERRDELAELETLETGKPLAEARGEVPRAIDTLRYYAGLARKLEGETLPS-DPGVLAY 121

Query: 166 ENWNPLGVVGIISAFNFPVAVYGWNAAIALV 196
               PLGVVG I+ +NFP+ +  W  A AL 
Sbjct: 122 TRREPLGVVGAITPWNFPLLLAAWKIAPALA 152

This family of dehydrogenases act on aldehyde substrates. Members use NADP as a cofactor. The family includes the following members: The prototypical members are the aldehyde dehydrogenases EC:1.2.1.3. Succinate-semialdehyde dehydrogenase EC:1.2.1.16. Lactaldehyde dehydrogenase EC:1.2.1.22. Benzaldehyde dehydrogenase EC:1.2.1.28. Methylmalonate-semialdehyde dehydrogenase EC:1.2.1.27. Glyceraldehyde-3-phosphate dehydrogenase EC:1.2.1.9. Delta-1-pyrroline-5-carboxylate dehydrogenase EC: 1.5.1.12. Acetaldehyde dehydrogenase EC:1.2.1.10. Glutamate-5-semialdehyde dehydrogenase EC:1.2.1.41. This family also includes omega crystallin, an eye lens protein from squid and octopus that has little aldehyde dehydrogenase activity. Length = 459

>gnl|CDD|215767 pfam00171, Aldedh, Aldehyde dehydrogenase family

 Score =  152 bits (386), Expect = 9e-42
 Identities = 62/242 (25%), Positives = 96/242 (39%), Gaps = 61/242 (25%)

Query: 195 LVGVAVQSRFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHK 254
            +  A      ++ LELGG N +IV +DADL+ A +  VF   G AGQ CT   RL +H+
Sbjct: 220 RIAKAAAKNLKRVTLELGGKNPLIVFDDADLDAAVEGAVFGAFGNAGQVCTAGSRLLVHE 279

Query: 255 --------------KKI-----DRPGYFVEP----------------------TIVTG-- 271
                         K +       P   + P                       ++ G  
Sbjct: 280 SIYDEFVERLVEAAKSLKVGDPLDPDTDIGPLISKKQRERVLSYIEDAKEEGAKLLCGGE 339

Query: 272 ----------------LPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIF 315
                           +  + R+   E F P++ V PF   DEAI   N+ + GL++ +F
Sbjct: 340 AGLEKGYFVEPTVLADVTPDMRIAQEEIFGPVLSVIPFKDEDEAIELANDTEYGLAAGVF 399

Query: 316 TKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRS 375
           T D+    +    +  + G++ +N  T G      FGG K +G GRE G +  ++Y    
Sbjct: 400 TNDLERALRVA--RRLEAGMVWINDYTTGDPEALPFGGFKQSGFGREGGKEGLEEYTETK 457

Query: 376 TV 377
           TV
Sbjct: 458 TV 459

This family of dehydrogenases act on aldehyde substrates. Members use NADP as a cofactor. The family includes the following members: The prototypical members are the aldehyde dehydrogenases EC:1.2.1.3. Succinate-semialdehyde dehydrogenase EC:1.2.1.16. Lactaldehyde dehydrogenase EC:1.2.1.22. Benzaldehyde dehydrogenase EC:1.2.1.28. Methylmalonate-semialdehyde dehydrogenase EC:1.2.1.27. Glyceraldehyde-3-phosphate dehydrogenase EC:1.2.1.9. Delta-1-pyrroline-5-carboxylate dehydrogenase EC: 1.5.1.12. Acetaldehyde dehydrogenase EC:1.2.1.10. Glutamate-5-semialdehyde dehydrogenase EC:1.2.1.41. This family also includes omega crystallin, an eye lens protein from squid and octopus that has little aldehyde dehydrogenase activity. Length = 459

>gnl|CDD|223944 COG1012, PutA, NAD-dependent aldehyde dehydrogenases [Energy production and conversion]

 Score =  139 bits (352), Expect = 6e-37
 Identities = 78/289 (26%), Positives = 109/289 (37%), Gaps = 71/289 (24%)

Query: 45  WKANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIG 104
           W      I  INP+TGE IA+V     +D    + ++RAA+ AW+ L A  R  I+R+I 
Sbjct: 9   WVDGASTIEVINPATGEVIATVPAATAEDVDAAVAAARAAFEAWSRLSAEERAAILRRIA 68

Query: 105 DALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVL 164
           D L  +   L  L++LE GK ++E  GE+    D   Y    +R   G  +P+++    L
Sbjct: 69  DLLEARAEELAALITLETGKPISEARGEIARAADFIRYYAEEARRLEGETIPTDKGSKAL 128

Query: 165 LE-----------NWN----------------------------PLGVVGIISAFN---F 182
           +             WN                            PL  + +         
Sbjct: 129 VRREPLGVVGAITPWNFPLALAAWKLAPALAAGNTVVLKPSEQTPLSALALAELAAEAGL 188

Query: 183 PVAVYGW-----------------NAAIALVG---------VAVQSRFGKLLLELGGNNA 216
           P  V                      AI+  G          A  +    + LELGG + 
Sbjct: 189 PAGVLNVVTGGGAEVGDALVAHPDVDAISFTGSTAVGRAIAAAAAANLKPVTLELGGKSP 248

Query: 217 IIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKKKIDRPGYFVE 265
            IV EDADL+ A    VF     AGQRCT   RL +H+   D    FVE
Sbjct: 249 AIVLEDADLDAAVDAAVFGAFFNAGQRCTAASRLIVHESVYDE---FVE 294

Length = 472

>gnl|CDD|143407 cd07088, ALDH_LactADH-AldA, Escherichia coli lactaldehyde dehydrogenase AldA-like

 Score =  136 bits (345), Expect = 6e-36
 Identities = 53/150 (35%), Positives = 79/150 (52%)

Query: 47  ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDA 106
           ++GE I  +NP+TGE +A+V     +D  R ++++ AA  AW  LPA  R   +R++ D 
Sbjct: 10  SSGETIDVLNPATGEVVATVPAATAEDADRAVDAAEAAQKAWERLPAIERAAYLRKLADL 69

Query: 107 LRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLE 166
           +R     L +L+  E GK L+    EV+   D  DY    +R   G I+PS+RP   +  
Sbjct: 70  IRENADELAKLIVEEQGKTLSLARVEVEFTADYIDYMAEWARRIEGEIIPSDRPNENIFI 129

Query: 167 NWNPLGVVGIISAFNFPVAVYGWNAAIALV 196
              P+GVV  I  +NFP  +     A ALV
Sbjct: 130 FKVPIGVVAGILPWNFPFFLIARKLAPALV 159

Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. Length = 468

>gnl|CDD|143449 cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like

 Score =  136 bits (344), Expect = 8e-36
 Identities = 59/151 (39%), Positives = 83/151 (54%), Gaps = 1/151 (0%)

Query: 47  ANGEIIPSINPSTGETIASVQQ-GNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGD 105
           A+GE   S NP+  E +          D    +E++R A+  W  +PAPRR E + +  +
Sbjct: 11  ASGETFDSRNPADLEEVVGTFPLSTASDVDAAVEAAREAFPEWRKVPAPRRAEYLFRAAE 70

Query: 106 ALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLL 165
            L+ +   L +LV+ EMGK LAEG G+VQE ID+  YA G  R   G  +PSE P    +
Sbjct: 71  LLKKRKEELARLVTREMGKPLAEGRGDVQEAIDMAQYAAGEGRRLFGETVPSELPNKDAM 130

Query: 166 ENWNPLGVVGIISAFNFPVAVYGWNAAIALV 196
               P+GVV +I+ +NFPVA+  W    ALV
Sbjct: 131 TRRQPIGVVALITPWNFPVAIPSWKIFPALV 161

Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. Length = 478

>gnl|CDD|143415 cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like

 Score =  131 bits (333), Expect = 3e-34
 Identities = 56/161 (34%), Positives = 80/161 (49%), Gaps = 2/161 (1%)

Query: 37  PGVYDGTSWKANGEIIPSINPS-TGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPR 95
               DG  W A G+   + NPS T + +    + + +D    I ++ AA+ AW       
Sbjct: 2   RNYIDG-EWVAGGDGEENRNPSDTSDVVGKYARASAEDADAAIAAAAAAFPAWRRTSPEA 60

Query: 96  RGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSIL 155
           R +I+ + GD L  +   L +L++ E GK L E  GEV     I  Y  G +   SG  L
Sbjct: 61  RADILDKAGDELEARKEELARLLTREEGKTLPEARGEVTRAGQIFRYYAGEALRLSGETL 120

Query: 156 PSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALV 196
           PS RPG  +     PLGVVG+I+ +NFP+A+  W  A AL 
Sbjct: 121 PSTRPGVEVETTREPLGVVGLITPWNFPIAIPAWKIAPALA 161

Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. Length = 473

>gnl|CDD|143397 cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrogenase family

 Score =  130 bits (329), Expect = 6e-34
 Identities = 41/120 (34%), Positives = 64/120 (53%), Gaps = 2/120 (1%)

Query: 260 PGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDV 319
            GYFV PT++T +  +  +   E F P++ V PF   +EAI   N+ + GL++ +FT+D+
Sbjct: 315 KGYFVPPTVLTDVDPDMPIAQEEIFGPVLPVIPFKDEEEAIELANDTEYGLAAGVFTRDL 374

Query: 320 TNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTI 379
               +       + G + +N  + GAE    FGG K +G GRE G    ++Y    TVTI
Sbjct: 375 ERALRVAE--RLEAGTVWINDYSVGAEPSAPFGGVKQSGIGREGGPYGLEEYTEPKTVTI 432

The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-like) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. Length = 432

>gnl|CDD|143397 cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrogenase family

 Score =  126 bits (318), Expect = 2e-32
 Identities = 69/246 (28%), Positives = 98/246 (39%), Gaps = 69/246 (28%)

Query: 78  IESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFI 137
           + ++RAA+ AWAALP   R  I+R++ D L  +   L  L +LE GK + E +GEV    
Sbjct: 4   VAAARAAFKAWAALPPAERAAILRKLADLLEERREELAALETLETGKPIEEALGEVARAA 63

Query: 138 DICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL-V 196
           D   Y  GL+R   G ++PS  PG + +    PLGVVG I+ +NFP+ +  W  A AL  
Sbjct: 64  DTFRYYAGLARRLHGEVIPSPDPGELAIVRREPLGVVGAITPWNFPLLLAAWKLAPALAA 123

Query: 197 GVAV------QS-----RFGKLLLELG----------GN-----NAIIVNEDADL----- 225
           G  V       +        +LL E G          G+      A+  +   D      
Sbjct: 124 GNTVVLKPSELTPLTALLLAELLAEAGLPPGVLNVVTGDGDEVGAALASHPRVDKISFTG 183

Query: 226 ----------NLAQQ-------------CLVF--------------ACCGTAGQRCTTTR 248
                       A+               +VF                 G AGQ CT   
Sbjct: 184 STAVGKAIMRAAAENLKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAFGNAGQVCTAAS 243

Query: 249 RLFLHK 254
           RL +H+
Sbjct: 244 RLLVHE 249

The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-like) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. Length = 432

>gnl|CDD|223944 COG1012, PutA, NAD-dependent aldehyde dehydrogenases [Energy production and conversion]

 Score =  122 bits (307), Expect = 1e-30
 Identities = 46/124 (37%), Positives = 71/124 (57%), Gaps = 3/124 (2%)

Query: 260 PGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDV 319
            GYFVEPTI+ G+  + R+   E F P++ V  F   +EAI   N+ + GL+++IFT+D+
Sbjct: 349 GGYFVEPTILEGVTPDMRIAREEIFGPVLPVIRFKDEEEAIELANDTEYGLAAAIFTRDL 408

Query: 320 TNLFKWLGPQGSDCGLINVNIPTNGAEIGGA-FGGEKYTGGGRESGSDSWKQYCRRSTVT 378
              F+    +  + G++ +N  T GA+I    FGG K +G GRE G    +++    TVT
Sbjct: 409 ARAFRVA--RRLEAGMVGINDYTGGADIAYLPFGGVKQSGLGREGGKYGLEEFTEVKTVT 466

Query: 379 INHG 382
           I  G
Sbjct: 467 IKLG 470

Length = 472

>gnl|CDD|143395 cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehydrogenase superfamily

 Score =  116 bits (293), Expect = 2e-29
 Identities = 53/123 (43%), Positives = 68/123 (55%), Gaps = 1/123 (0%)

Query: 79  ESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFID 138
            ++RAA+ AWAALP   R  I+R+I D L  +   L  L +LE GK + E +GEV   ID
Sbjct: 1   AAARAAFKAWAALPPAERAAILRKIADLLEERREELAALETLETGKPIEEALGEVARAID 60

Query: 139 ICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALV-G 197
              YA GL+    G  LPS  PG        PLGVVG+I+ +NFP+ +  W  A AL  G
Sbjct: 61  TFRYAAGLADKLGGPELPSPDPGGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALAAG 120

Query: 198 VAV 200
             V
Sbjct: 121 NTV 123

The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-L) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. The ALDH-like group is represented by such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 367

>gnl|CDD|143449 cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like

 Score =  110 bits (277), Expect = 1e-26
 Identities = 47/126 (37%), Positives = 70/126 (55%), Gaps = 7/126 (5%)

Query: 260 PGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDV 319
            GYFVEPT+ T +  + R+   E F P+V +    SL+EAI   N+ + GLSS+I+T+DV
Sbjct: 357 KGYFVEPTVFTDVTPDMRIAQEEIFGPVVALIEVSSLEEAIEIANDTEYGLSSAIYTEDV 416

Query: 320 TNLFKWLGPQGSDC--GLINVNIPTNGAEIGGAFGGEKYTGGG-RESGSDSWKQYCRRST 376
              F+       D   G+  VN PT GAE+   FGG K +G G RE+G+ +   +     
Sbjct: 417 NKAFRARR----DLEAGITYVNAPTIGAEVHLPFGGVKKSGNGHREAGTTALDAFTEWKA 472

Query: 377 VTINHG 382
           V +++ 
Sbjct: 473 VYVDYS 478

Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. Length = 478

>gnl|CDD|143417 cd07099, ALDH_DDALDH, Methylomonas sp

 Score =  110 bits (276), Expect = 1e-26
 Identities = 62/251 (24%), Positives = 99/251 (39%), Gaps = 76/251 (30%)

Query: 196 VGVAVQSRFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRL----- 250
           V  A   R   ++LELGG + +IV  DADL  A    V+     AGQ C +  R+     
Sbjct: 212 VMAAAAERLIPVVLELGGKDPMIVLADADLERAAAAAVWGAMVNAGQTCISVERVYVHES 271

Query: 251 ----FLHK--------------------------------------------------KK 256
               F+ +                                                   +
Sbjct: 272 VYDEFVARLVAKARALRPGADDIGDADIGPMTTARQLDIVRRHVDDAVAKGAKALTGGAR 331

Query: 257 IDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFT 316
            +  G F EPT++T +PH+  V+  ETF P++ V P    DEAI   N+ + GLS+S+F+
Sbjct: 332 SNGGGPFYEPTVLTDVPHDMDVMREETFGPVLPVMPVADEDEAIALANDSRYGLSASVFS 391

Query: 317 KDVTN-------LFKWLGPQGSDCGLINVN-IPTNGAEIGGAFGGEKYTGGGRESGSDSW 368
           +D+         L         + G +++N +          FGG K +GGGR  G++  
Sbjct: 392 RDLARAEAIARRL---------EAGAVSINDVLLTAGIPALPFGGVKDSGGGRRHGAEGL 442

Query: 369 KQYCRRSTVTI 379
           +++CR   +  
Sbjct: 443 REFCRPKAIAR 453

4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. Length = 453

>gnl|CDD|143421 cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like

 Score =  105 bits (265), Expect = 5e-25
 Identities = 51/139 (36%), Positives = 68/139 (48%), Gaps = 16/139 (11%)

Query: 55  INPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPL 114
           INP+TGE I  V      D    I+++ AA+  W    A  R  I+R+  D +R +   L
Sbjct: 2   INPATGEVIGEVPDAGAADADAAIDAAAAAFKTWRKTTARERAAILRRWADLIRERAEDL 61

Query: 115 GQLVSLEMGKILAEGIGEVQEFIDICDYAVGL--------SRTYSGSILPSERPGHVLLE 166
            +L++LE GK LAE  GEV       DYA            R Y G  +PS  PG  +L 
Sbjct: 62  ARLLTLEQGKPLAEARGEV-------DYAASFLEWFAEEARRIY-GRTIPSPAPGKRILV 113

Query: 167 NWNPLGVVGIISAFNFPVA 185
              P+GVV  I+ +NFP A
Sbjct: 114 IKQPVGVVAAITPWNFPAA 132

Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. Length = 451

>gnl|CDD|143464 cd07146, ALDH_PhpJ, Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like

 Score =  104 bits (261), Expect = 1e-24
 Identities = 67/243 (27%), Positives = 99/243 (40%), Gaps = 67/243 (27%)

Query: 198 VAVQSRFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRR-------- 249
           +A  + + + LLELGGN+ +IV +DADL  A    V      +GQRCT  +R        
Sbjct: 215 IAATAGYKRQLLELGGNDPLIVMDDADLERAATLAVAGSYANSGQRCTAVKRILVHESVA 274

Query: 250 -----LFLHKKK-----------------IDRP--------------------------G 261
                L + K                   ID                            G
Sbjct: 275 DEFVDLLVEKSAALVVGDPMDPATDMGTVIDEEAAIQIENRVEEAIAQGARVLLGNQRQG 334

Query: 262 YFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKD--- 318
               PT++  +P ++ +V  ETF P+  V     LDEAI  +N    GLSS + T D   
Sbjct: 335 ALYAPTVLDHVPPDAELVTEETFGPVAPVIRVKDLDEAIAISNSTAYGLSSGVCTNDLDT 394

Query: 319 VTNLFKWLGPQGSDCGLINVN-IPTNGAEIGGAFGGEKYTG-GGRESGSDSWKQYCRRST 376
           +  L + L     D G +NVN +P   +E+   FGG K +G GG+E   ++ K+     T
Sbjct: 395 IKRLVERL-----DVGTVNVNEVPGFRSEL-SPFGGVKDSGLGGKEGVREAMKEMTNVKT 448

Query: 377 VTI 379
            ++
Sbjct: 449 YSL 451

Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. Length = 451

>gnl|CDD|143422 cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins

 Score =  103 bits (259), Expect = 2e-24
 Identities = 61/236 (25%), Positives = 95/236 (40%), Gaps = 62/236 (26%)

Query: 196 VGVAVQSRFGKLL----LELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLF 251
           VG  +    G+ L    LELGGNN +IV +DADL+LA     F      GQ C    R+ 
Sbjct: 190 VGRHIGELAGRHLKKVALELGGNNPLIVLDDADLDLAVSAAAFGAFLHQGQICMAAGRIL 249

Query: 252 LHK-----------------------------------KKIDRPGYFVE------PTIVT 270
           +H+                                   +++DR    VE        ++T
Sbjct: 250 VHESVYDEFVEKLVAKAKALPVGDPRDPDTVIGPLINERQVDRVHAIVEDAVAAGARLLT 309

Query: 271 GLPHNSRVV---------------HRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIF 315
           G  +                      E F P+  V PFD  +EA+   N+ + GLS+++F
Sbjct: 310 GGTYEGLFYQPTVLSDVTPDMPIFREEIFGPVAPVIPFDDDEEAVELANDTEYGLSAAVF 369

Query: 316 TKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQY 371
           T+D+         +  + G++++N  T   E    FGG K +GGGR  G  S +++
Sbjct: 370 TRDLERAMA-FAER-LETGMVHINDQTVNDEPHVPFGGVKASGGGRFGGPASLEEF 423

ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. Length = 431

>gnl|CDD|143404 cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2

 Score =  103 bits (260), Expect = 3e-24
 Identities = 67/267 (25%), Positives = 103/267 (38%), Gaps = 72/267 (26%)

Query: 48  NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDAL 107
             E +   NP+TGE IA V     ++    + +++AA+ AW+A P  +R +++ +    L
Sbjct: 14  TTEWLDVYNPATGEVIARVPLATAEEVDAAVAAAKAAFPAWSATPVLKRQQVMFKFRQLL 73

Query: 108 RHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLEN 167
              L  L +L++LE GK LA+  G+V   +++ ++A  +     G  L +   G      
Sbjct: 74  EENLDELARLITLEHGKTLADARGDVLRGLEVVEFACSIPHLLKGEYLENVARGIDTYSY 133

Query: 168 WNPLGVVGIISAFNFPVAVYGWNAAIALV--------------GVAVQSRFGKLLLELG- 212
             PLGVV  I+ FNFP  +  W   +A+               G A+  R  +LL E G 
Sbjct: 134 RQPLGVVAGITPFNFPAMIPLWMFPMAIACGNTFVLKPSERVPGAAM--RLAELLQEAGL 191

Query: 213 ---------GN----NAIIVNED------------------------------------- 222
                    G     NA++ + D                                     
Sbjct: 192 PDGVLNVVHGGKEAVNALLDHPDIKAVSFVGSTPVGEYIYERAAANGKRVQALGGAKNHA 251

Query: 223 -----ADLNLAQQCLVFACCGTAGQRC 244
                ADL      LV A  G AGQRC
Sbjct: 252 VVMPDADLEQTANALVGAAFGAAGQRC 278

Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. Length = 478

>gnl|CDD|143413 cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins

 Score =  101 bits (254), Expect = 1e-23
 Identities = 97/455 (21%), Positives = 154/455 (33%), Gaps = 135/455 (29%)

Query: 55  INPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPL 114
            NP  GE I  V   +  D    + ++RA      ALP   R  I+ +  D L+ +    
Sbjct: 4   HNPYDGEVIGKVPADDRADAEEALATARAGAENRRALPPHERMAILERAADLLKKRAEEF 63

Query: 115 GQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSE-------RPGHVLLEN 167
            ++++ E GK + +   EV   ID    A   +    G  +P +       R    + E 
Sbjct: 64  AKIIACEGGKPIKDARVEVDRAIDTLRLAAEEAERIRGEEIPLDATQGSDNRLAWTIRE- 122

Query: 168 WNPLGVVGIISAFNFPVAVYGWNAAIAL-VGVAV-----------QSRFGKLLLELG--- 212
             P+GVV  I+ FNFP+ +     A A+  G  V                K+L+E G   
Sbjct: 123 --PVGVVLAITPFNFPLNLVAHKLAPAIATGCPVVLKPASKTPLSALELAKILVEAGVPE 180

Query: 213 ------------GNNAIIVNED-------------------------------------- 222
                         +A   +E                                       
Sbjct: 181 GVLQVVTGEREVLGDAFAADERVAMLSFTGSAAVGEALRANAGGKRIALELGGNAPVIVD 240

Query: 223 --ADLNLAQQCLVFACCGTAGQRCTTTRRLFLH----------------KKKIDRP---G 261
             ADL+ A + L       AGQ C + +R+++H                K K+  P    
Sbjct: 241 RDADLDAAIEALAKGGFYHAGQVCISVQRIYVHEELYDEFIEAFVAAVKKLKVGDPLDED 300

Query: 262 YFVEP----------------------TIVTG---------------LPHNSRVVHRETF 284
             V P                       ++ G               +P ++++   ETF
Sbjct: 301 TDVGPLISEEAAERVERWVEEAVEAGARLLCGGERDGALFKPTVLEDVPRDTKLSTEETF 360

Query: 285 APIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNG 344
            P+V +  +D  +EAI   N    GL + IFT+D+   FK    +  + G + VN  +  
Sbjct: 361 GPVVPIIRYDDFEEAIRIANSTDYGLQAGIFTRDLNVAFK--AAEKLEVGGVMVNDSSAF 418

Query: 345 AEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTI 379
                 FGG K +G GRE    + ++     TV I
Sbjct: 419 RTDWMPFGGVKESGVGREGVPYAMEEMTEEKTVVI 453

ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. Length = 453

>gnl|CDD|143467 cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1

 Score =  100 bits (252), Expect = 2e-23
 Identities = 64/226 (28%), Positives = 94/226 (41%), Gaps = 62/226 (27%)

Query: 196 VGVAVQSRFG--KLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLH 253
           VG A+  + G  K+ LELG N A+IV+ DADL  A +  V      AGQ C + +R+F+H
Sbjct: 214 VGEAIARKAGLKKVTLELGSNAAVIVDADADLEKAVERCVSGAFANAGQVCISVQRIFVH 273

Query: 254 KKKIDR-------------------PGYFVEP----------------------TIVTG- 271
           +   D                        V P                       ++TG 
Sbjct: 274 EDIYDEFLERFVAATKKLVVGDPLDEDTDVGPMISEAEAERIEEWVEEAVEGGARLLTGG 333

Query: 272 --------------LPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTK 317
                         +P + +VV  E FAP+V + PFD+LDEAI   N+   GL + +FT 
Sbjct: 334 KRDGAILEPTVLTDVPPDMKVVCEEVFAPVVSLNPFDTLDEAIAMANDSPYGLQAGVFTN 393

Query: 318 DVTNLFKWLGPQGSDCGLINVN-IPTNGAEIGGAFGGEKYTGGGRE 362
           D+    K    +  + G + +N   T   +    +GG K +G GRE
Sbjct: 394 DLQKALKAA--RELEVGGVMINDSSTFRVD-HMPYGGVKESGTGRE 436

Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 453

>gnl|CDD|200131 TIGR01804, BADH, glycine betaine aldehyde dehydrogenase

 Score = 99.1 bits (247), Expect = 9e-23
 Identities = 50/151 (33%), Positives = 76/151 (50%), Gaps = 2/151 (1%)

Query: 47  ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDA 106
           + G     INP+ GE IA+V     +D  R I ++R A   WAA+    RG I+R+  D 
Sbjct: 10  SAGTTREIINPANGEVIATVHAATPEDVERAIAAARRAQGEWAAMSPMERGRILRRAADL 69

Query: 107 LRHKLVPLGQLVSLEMGKILAEGI-GEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLL 165
           +R +   L +L +L+ GK L E I  ++    D+ ++  GL+   +G I+P   P     
Sbjct: 70  IRERNEELAKLETLDTGKTLQETIVADMDSGADVFEFFAGLAPALNGEIIPLGGPSFAYT 129

Query: 166 ENWNPLGVVGIISAFNFPVAVYGWNAAIALV 196
               PLGV   I A+N+P+ +  W  A AL 
Sbjct: 130 IR-EPLGVCVGIGAWNYPLQIASWKIAPALA 159

Under osmotic stress, betaine aldehyde dehydrogenase oxidizes glycine betaine aldehyde into the osmoprotectant glycine betaine, via the second of two oxidation steps from exogenously supplied choline or betaine aldehyde. This choline-glycine betaine synthesis pathway can be found in gram-positive and gram-negative bacteria. In Escherichia coli, betaine aldehyde dehydrogenase (betB) is osmotically co-induced with choline dehydrogenase (betA) in the presence of choline. These dehydrogenases are located in a betaine gene cluster with the upstream choline transporter (betT) and transcriptional regulator (betI). Similar to E.coli, betaine synthesis in Staphylococcus xylosus is also influenced by osmotic stress and the presence of choline with genes localized in a functionally equivalent gene cluster. Organization of the betaine gene cluster in Sinorhizobium meliloti and Bacillus subtilis differs from that of E.coli by the absence of upstream choline transporter and transcriptional regulator homologues. Additionally, B.subtilis co-expresses a type II alcohol dehydrogenase with betaine aldehyde dehydrogenase instead of choline dehydrogenase as in E.coli, St.xylosus, and Si.meliloti. Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171) [Cellular processes, Adaptations to atypical conditions]. Length = 467

>gnl|CDD|143426 cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like

 Score = 97.4 bits (243), Expect = 4e-22
 Identities = 50/143 (34%), Positives = 73/143 (51%), Gaps = 2/143 (1%)

Query: 55  INPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPL 114
           INP+TG+ I  V +    D  R + +++AA+  WAA PA  RG+++ +I DAL  +   L
Sbjct: 2   INPATGQVIGEVPRSRAADVDRAVAAAKAAFPEWAATPARERGKLLARIADALEARSEEL 61

Query: 115 GQLVSLEMGKIL-AEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGV 173
            +L++LE G  L  +   E     D+  Y  GL+    G  LP   P  +      PLGV
Sbjct: 62  ARLLALETGNALRTQARPEAAVLADLFRYFGGLAGELKGETLPF-GPDVLTYTVREPLGV 120

Query: 174 VGIISAFNFPVAVYGWNAAIALV 196
           VG I  +N P+ +     A ALV
Sbjct: 121 VGAILPWNAPLMLAALKIAPALV 143

NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. Length = 457

>gnl|CDD|143442 cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA

 Score = 96.9 bits (242), Expect = 7e-22
 Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 2/149 (1%)

Query: 49  GEIIPSINPS-TGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDAL 107
            E I S NP+   E + +VQ+   ++    ++++RAA+  W   P   R  ++ +    L
Sbjct: 45  EEKIESRNPADPSEVLGTVQKATKEEAEAAVQAARAAFPTWRRTPPEERARLLLRAAALL 104

Query: 108 RHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLEN 167
           R +   L   + LE+GK  AE   +V E ID  +Y         G  +            
Sbjct: 105 RRRRFELAAWMVLEVGKNWAEADADVAEAIDFLEYYAREMLRLRGFPVEMVPGEDNRYV- 163

Query: 168 WNPLGVVGIISAFNFPVAVYGWNAAIALV 196
           + PLGV  +IS +NFP+A+       ALV
Sbjct: 164 YRPLGVGAVISPWNFPLAILAGMTTAALV 192

Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. Length = 512

>gnl|CDD|143432 cd07114, ALDH_DhaS, Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like

 Score = 95.3 bits (238), Expect = 2e-21
 Identities = 43/144 (29%), Positives = 76/144 (52%), Gaps = 2/144 (1%)

Query: 54  SINPSTGETIASVQQGNVQDYHRCIESSRAAY--AAWAALPAPRRGEIVRQIGDALRHKL 111
           SINP+TGE  A V + +  D  R + ++RAA+   AW  L    RG+++R++ D +    
Sbjct: 1   SINPATGEPWARVPEASAADVDRAVAAARAAFEGGAWRKLTPTERGKLLRRLADLIEANA 60

Query: 112 VPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPL 171
             L +L + + GK++ E   +V+   +   Y  GL+    G+++P ++  ++      PL
Sbjct: 61  EELAELETRDNGKLIRETRAQVRYLAEWYRYYAGLADKIEGAVIPVDKGDYLNFTRREPL 120

Query: 172 GVVGIISAFNFPVAVYGWNAAIAL 195
           GVV  I+ +N P+ +     A AL
Sbjct: 121 GVVAAITPWNSPLLLLAKKLAPAL 144

Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. Length = 457

>gnl|CDD|143418 cd07100, ALDH_SSADH1_GabD1, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like

 Score = 94.4 bits (236), Expect = 3e-21
 Identities = 59/236 (25%), Positives = 83/236 (35%), Gaps = 80/236 (33%)

Query: 197 GVAVQSRFGKLL----LELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRL-- 250
           G AV +  GK L    LELGG++  IV +DADL+ A +  V      AGQ C   +R   
Sbjct: 187 GRAVAAEAGKNLKKSVLELGGSDPFIVLDDADLDKAVKTAVKGRLQNAGQSCIAAKRFIV 246

Query: 251 -------FLHK------------------------------------------------- 254
                  FL K                                                 
Sbjct: 247 HEDVYDEFLEKFVEAMAALKVGDPMDEDTDLGPLARKDLRDELHEQVEEAVAAGATLLLG 306

Query: 255 -KKIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSS 313
            K+ D PG F  PT++T +         E F P+  V      +EAI   N+   GL  S
Sbjct: 307 GKRPDGPGAFYPPTVLTDVTPGMPAYDEELFGPVAAVIKVKDEEEAIALANDSPFGLGGS 366

Query: 314 IFTKDVTNLFKWLGPQGS------DCGLINVNIPT-NGAEIGGAFGGEKYTGGGRE 362
           +FT D+         +        + G++ +N    +   +   FGG K +G GRE
Sbjct: 367 VFTTDLE--------RAERVARRLEAGMVFINGMVKSDPRL--PFGGVKRSGYGRE 412

Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. Length = 429

>gnl|CDD|143468 cd07150, ALDH_VaniDH_like, Pseudomonas putida vanillin dehydrogenase-like

 Score = 94.7 bits (236), Expect = 3e-21
 Identities = 60/232 (25%), Positives = 90/232 (38%), Gaps = 62/232 (26%)

Query: 196 VGVAVQSRFGKLL----LELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLF 251
           VG  +  + G+ L    LELGG N +IV  DADL+ A +   F      GQ C +  R+ 
Sbjct: 210 VGREIAEKAGRHLKKITLELGGKNPLIVLADADLDYAVRAAAFGAFMHQGQICMSASRII 269

Query: 252 LHKKKIDR-------------------PGYFVEPTI------------------------ 268
           + +   D                    P   + P I                        
Sbjct: 270 VEEPVYDEFVKKFVARASKLKVGDPRDPDTVIGPLISPRQVERIKRQVEDAVAKGAKLLT 329

Query: 269 -------------VTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIF 315
                        +T +  + R+   ETF P+  V P    +EA+   N+ + GLS++I 
Sbjct: 330 GGKYDGNFYQPTVLTDVTPDMRIFREETFGPVTSVIPAKDAEEALELANDTEYGLSAAIL 389

Query: 316 TKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDS 367
           T D+   FK    +  + G++++N PT   E    FGG K +G GRE G  S
Sbjct: 390 TNDLQRAFKL--AERLESGMVHINDPTILDEAHVPFGGVKASGFGREGGEWS 439

Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. Length = 451

>gnl|CDD|143424 cd07106, ALDH_AldA-AAD23400, Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like

 Score = 93.7 bits (234), Expect = 5e-21
 Identities = 38/124 (30%), Positives = 61/124 (49%), Gaps = 7/124 (5%)

Query: 258 DRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTK 317
           D PGYF+ PTIV   P  SR+V  E F P++ V  +   DE I   N+ + GL +S+++ 
Sbjct: 328 DGPGYFIPPTIVDDPPEGSRIVDEEQFGPVLPVLKYSDEDEVIARANDSEYGLGASVWSS 387

Query: 318 DVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGA--FGGEKYTGGGRESGSDSWKQYCRRS 375
           D+      +  +  + G + +N       +     FGG K +G G E G +  K+Y +  
Sbjct: 388 DLERAEA-VARR-LEAGTVWIN---THGALDPDAPFGGHKQSGIGVEFGIEGLKEYTQTQ 442

Query: 376 TVTI 379
            + I
Sbjct: 443 VINI 446

Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. Length = 446

>gnl|CDD|215157 PLN02278, PLN02278, succinic semialdehyde dehydrogenase

 Score = 94.0 bits (234), Expect = 6e-21
 Identities = 58/159 (36%), Positives = 83/159 (52%), Gaps = 8/159 (5%)

Query: 42  GTSWKA--NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEI 99
           G  W    +G+  P  NP+TGE IA+V      + +  I S+  A+ +W+ L A  R +I
Sbjct: 30  GGKWTDAYDGKTFPVYNPATGEVIANVPCMGRAETNDAIASAHDAFPSWSKLTASERSKI 89

Query: 100 VRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEV---QEFIDICDYAVGLSRTYSGSILP 156
           +R+  D +      L QL++LE GK L E IGEV     F++   +A    R Y G I+P
Sbjct: 90  LRRWYDLIIANKEDLAQLMTLEQGKPLKEAIGEVAYGASFLEY--FAEEAKRVY-GDIIP 146

Query: 157 SERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL 195
           S  P   LL    P+GVVG I+ +NFP+A+       AL
Sbjct: 147 SPFPDRRLLVLKQPVGVVGAITPWNFPLAMITRKVGPAL 185

Length = 498

>gnl|CDD|143424 cd07106, ALDH_AldA-AAD23400, Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like

 Score = 93.4 bits (233), Expect = 8e-21
 Identities = 47/146 (32%), Positives = 67/146 (45%), Gaps = 11/146 (7%)

Query: 55  INPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPL 114
           INP+TGE  AS    +     + + +++AA+  W+A P   R   +  I DA+      L
Sbjct: 2   INPATGEVFASAPVASEAQLDQAVAAAKAAFPGWSATPLEERRAALLAIADAIEANAEEL 61

Query: 115 GQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSER----PGHVLLENWNP 170
            +L++LE GK LAE   EV         AV   R  +   LP E         +     P
Sbjct: 62  ARLLTLEQGKPLAEAQFEV-------GGAVAWLRYTASLDLPDEVIEDDDTRRVELRRKP 114

Query: 171 LGVVGIISAFNFPVAVYGWNAAIALV 196
           LGVV  I  +NFP+ +  W  A AL+
Sbjct: 115 LGVVAAIVPWNFPLLLAAWKIAPALL 140

Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. Length = 446

>gnl|CDD|143433 cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like

 Score = 91.7 bits (228), Expect = 3e-20
 Identities = 52/174 (29%), Positives = 82/174 (47%), Gaps = 18/174 (10%)

Query: 54  SINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVP 113
           ++NP+TGE IA V Q + +D    + ++RAA+ AW+A+    RG I+ ++ + +      
Sbjct: 1   TLNPATGELIARVAQASAEDVDAAVAAARAAFEAWSAMDPAERGRILWRLAELILANADE 60

Query: 114 LGQLVSLEMGKILAEG-IGEVQEFIDICDYAVGLSRTYSGSILPSERP--GHVLLENWNP 170
           L +L SL+ GK +      +V    D   Y  G +    G ++P   P   + + E   P
Sbjct: 61  LARLESLDTGKPIRAARRLDVPRAADTFRYYAGWADKIEGEVIPVRGPFLNYTVRE---P 117

Query: 171 LGVVGIISAFNFPVAVYGWNAAIAL-VGVAV-----------QSRFGKLLLELG 212
           +GVVG I  +NFP+    W  A AL  G  V             R  +L+ E G
Sbjct: 118 VGVVGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELTPLSALRIAELMAEAG 171

4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. Length = 453

>gnl|CDD|143421 cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like

 Score = 91.3 bits (228), Expect = 4e-20
 Identities = 37/114 (32%), Positives = 64/114 (56%), Gaps = 9/114 (7%)

Query: 255 KKIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSI 314
           K++   GYF EPT++T +  +  +++ ETF P+  + PFD+ DE I   N+   GL++ +
Sbjct: 330 KRLGLGGYFYEPTVLTDVTDDMLIMNEETFGPVAPIIPFDTEDEVIARANDTPYGLAAYV 389

Query: 315 FTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGA---FGGEKYTGGGRESGS 365
           FT+D+   ++ +  +  + G++ +N       I  A   FGG K +G GRE G 
Sbjct: 390 FTRDLARAWR-VA-EALEAGMVGINTGL----ISDAEAPFGGVKESGLGREGGK 437

Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. Length = 451

>gnl|CDD|143465 cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase family 21A1-like

 Score = 90.8 bits (226), Expect = 6e-20
 Identities = 62/226 (27%), Positives = 96/226 (42%), Gaps = 62/226 (27%)

Query: 196 VGVAVQSRFGK--LLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLH 253
           VG  +++R GK  ++LELGGN A+IV+ DADL+ A Q ++F     AGQ C + +R+ +H
Sbjct: 213 VGWDLKARAGKKKVVLELGGNAAVIVDSDADLDFAAQRIIFGAFYQAGQSCISVQRVLVH 272

Query: 254 KKKIDR-------------------PGYFVEP---------------------------- 266
           +   D                        V P                            
Sbjct: 273 RSVYDEFKSRLVARVKALKTGDPKDDATDVGPMISESEAERVEGWVNEAVDAGAKLLTGG 332

Query: 267 ---------TIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTK 317
                    TI+  +P +  V   E F P+V V P+D  DEA+   N+ K GL + +FT+
Sbjct: 333 KRDGALLEPTILEDVPPDMEVNCEEVFGPVVTVEPYDDFDEALAAVNDSKFGLQAGVFTR 392

Query: 318 DVTNLFKWLGPQGSDCGLINVN-IPTNGAEIGGAFGGEKYTGGGRE 362
           D+    +       + G + +N +PT   +    +GG K +G GRE
Sbjct: 393 DLEKALRAWD--ELEVGGVVINDVPTFRVD-HMPYGGVKDSGIGRE 435

Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. Length = 452

>gnl|CDD|143414 cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like

 Score = 90.4 bits (225), Expect = 7e-20
 Identities = 56/222 (25%), Positives = 82/222 (36%), Gaps = 62/222 (27%)

Query: 203 RFGKLL-LELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHK------- 254
           R GK+L LE+GGNN ++V + AD++ A   +V +   TAGQRCT  RRL +         
Sbjct: 198 RPGKILALEMGGNNPLVVWDVADIDAAAYLIVQSAFLTAGQRCTCARRLIVPDGAVGDAF 257

Query: 255 --------KKIDRPGYFVEPTIVTGLPHNSRVVHRETFA--------------------- 285
                   K++       EP  +  L   +                              
Sbjct: 258 LERLVEAAKRLRIGAPDAEPPFMGPLIIAAAAARYLLAQQDLLALGGEPLLAMERLVAGT 317

Query: 286 -----------------------PIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNL 322
                                  P++ V+ +D  DEAI   N  + GLS+ + + D   L
Sbjct: 318 AFLSPGIIDVTDAADVPDEEIFGPLLQVYRYDDFDEAIALANATRFGLSAGLLSDD-EAL 376

Query: 323 FKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESG 364
           F+         G++N N PT GA     FGG   +G  R S 
Sbjct: 377 FERFL-ARIRAGIVNWNRPTTGASSTAPFGGVGLSGNHRPSA 417

N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. Length = 431

>gnl|CDD|143437 cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like

 Score = 88.5 bits (220), Expect = 4e-19
 Identities = 50/156 (32%), Positives = 80/156 (51%), Gaps = 11/156 (7%)

Query: 47  ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAA--WAALPAPRRGEIVRQIG 104
           A+G+    INP+ GE IA+V +G  +D  R I ++R A+ +  W  LPA  R  ++ +I 
Sbjct: 10  ASGKTRDIINPANGEVIATVPEGTAEDAKRAIAAARRAFDSGEWPHLPAQERAALLFRIA 69

Query: 105 DALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHV- 163
           D +R     L +L +L  GK L E   ++ +  +   Y  GL+   +G +     P HV 
Sbjct: 70  DKIREDAEELARLETLNTGKTLRESEIDIDDVANCFRYYAGLATKETGEVYDV--PPHVI 127

Query: 164 ---LLENWNPLGVVGIISAFNFPVAVYGWNAAIALV 196
              + E   P+GV G+I+ +N+P+    W  A AL 
Sbjct: 128 SRTVRE---PVGVCGLITPWNYPLLQAAWKLAPALA 160

Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. Length = 482

>gnl|CDD|143469 cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like

 Score = 88.1 bits (219), Expect = 5e-19
 Identities = 55/218 (25%), Positives = 88/218 (40%), Gaps = 60/218 (27%)

Query: 204 FGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLH---------- 253
             K+ LELGGNN  +V EDAD++ A    VF      GQ C    R+ +H          
Sbjct: 234 LKKVALELGGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMAINRIIVHEDVYDEFVEK 293

Query: 254 --------------------------------KKKIDRP--------------GYFVEPT 267
                                             KI++               G  +EPT
Sbjct: 294 FVERVKALPYGDPSDPDTVVGPLINESQVDGLLDKIEQAVEEGATLLVGGEAEGNVLEPT 353

Query: 268 IVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLG 327
           +++ + ++  +   E F P+  +   D  +EA+   N+ + GLS ++FT D+    ++  
Sbjct: 354 VLSDVTNDMEIAREEIFGPVAPIIKADDEEEALELANDTEYGLSGAVFTSDLERGVQF-- 411

Query: 328 PQGSDCGLINVN-IPTNGAEIGGAFGGEKYTGGGRESG 364
            +  D G+ ++N  P N  E    FGGEK +G GR +G
Sbjct: 412 ARRIDAGMTHINDQPVND-EPHVPFGGEKNSGLGRFNG 448

NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. Length = 465

>gnl|CDD|143459 cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like

 Score = 87.8 bits (218), Expect = 7e-19
 Identities = 104/471 (22%), Positives = 166/471 (35%), Gaps = 151/471 (32%)

Query: 49  GEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAY---AAWAALPAPRRGEIVRQIGD 105
           G+  P+INP+TGE I  VQ+G+  D  + ++++RAA+   + W  + A  RG ++ ++ D
Sbjct: 21  GKTFPTINPATGEKICEVQEGDKADVDKAVKAARAAFKLGSPWRTMDASERGRLLNKLAD 80

Query: 106 ALRHKLVPLGQLVSLEMGKILAEG-IGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVL 164
            +      L  L +L+ GK  ++  + ++   I +  Y  G +    G  +P +      
Sbjct: 81  LIERDRAYLASLETLDNGKPFSKSYLVDLPGAIKVLRYYAGWADKIHGKTIPMDGDFFTY 140

Query: 165 LEN-----------WN-------------------------------------------- 169
             +           WN                                            
Sbjct: 141 TRHEPVGVCGQIIPWNFPLLMAAWKLAPALACGNTVVLKPAEQTPLTALYLASLIKEAGF 200

Query: 170 PLGVVGIISAFNFPVAVYGWNAAIA--------------LVGVAVQSRFGK-----LLLE 210
           P GVV ++  +  P A     AAI+               VG  +Q   GK     + LE
Sbjct: 201 PPGVVNVVPGYG-PTA----GAAISSHPDIDKVAFTGSTEVGKLIQQAAGKSNLKRVTLE 255

Query: 211 LGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKKKIDRPGYFVEPTI-- 268
           LGG +  IV  DADL+ A +    A     GQ C    R F+ +   D    FV+ ++  
Sbjct: 256 LGGKSPNIVFADADLDYAVEQAHEALFFNMGQCCCAGSRTFVQESIYDE---FVKRSVER 312

Query: 269 ----VTGLPHNSRV-----VHRETFAPIV-------------------------YVFP-- 292
               V G P + +      +  E F  I+                         ++ P  
Sbjct: 313 AKKRVVGNPFDPKTEQGPQIDEEQFKKILELIESGKKEGAKLECGGKRHGDKGYFIQPTV 372

Query: 293 ------------------------FDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGP 328
                                   F ++DE I   N    GL++++FTKD+     +   
Sbjct: 373 FSDVTDDMRIAKEEIFGPVQQIFKFKTIDEVIERANNTTYGLAAAVFTKDIDKAITF--S 430

Query: 329 QGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTI 379
                G + VN   N       FGG K +G GRE G    ++Y    TVTI
Sbjct: 431 NALRAGTVWVNCY-NVVSPQAPFGGYKMSGNGRELGEYGLQEYTEVKTVTI 480

NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. Length = 481

>gnl|CDD|143412 cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogenase family 8 member A1-like

 Score = 87.6 bits (218), Expect = 7e-19
 Identities = 45/119 (37%), Positives = 66/119 (55%), Gaps = 3/119 (2%)

Query: 261 GYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVT 320
           GYFVEPT++TGL ++SRV   E F P+V V PFD  +EAI   N+   GL++ ++T+D+ 
Sbjct: 340 GYFVEPTVITGLDNDSRVAQEEIFGPVVTVIPFDDEEEAIELANDTPYGLAAYVWTRDLG 399

Query: 321 NLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTI 379
              +    +  + G + VN      ++   FGG K +G GRE G  S + Y     V I
Sbjct: 400 RAHRV--ARRLEAGTVWVNCW-LVRDLRTPFGGVKASGIGREGGDYSLEFYTELKNVCI 455

In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. Length = 455

>gnl|CDD|143468 cd07150, ALDH_VaniDH_like, Pseudomonas putida vanillin dehydrogenase-like

 Score = 87.4 bits (217), Expect = 8e-19
 Identities = 41/132 (31%), Positives = 61/132 (46%)

Query: 53  PSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLV 112
             +NP+ G   A V  G+ QD  R I ++  A+ AWAA     R  I+ +  + +  +  
Sbjct: 2   DDLNPADGSVYARVAVGSRQDAERAIAAAYDAFPAWAATTPSERERILLKAAEIMERRAD 61

Query: 113 PLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLG 172
            L  L+  E G    +   E     ++   A G  R   G  LPS+ PG V +    PLG
Sbjct: 62  DLIDLLIDEGGSTYGKAWFETTFTPELLRAAAGECRRVRGETLPSDSPGTVSMSVRRPLG 121

Query: 173 VVGIISAFNFPV 184
           VV  I+ FN+P+
Sbjct: 122 VVAGITPFNYPL 133

Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. Length = 451

>gnl|CDD|143425 cd07107, ALDH_PhdK-like, Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like

 Score = 87.4 bits (217), Expect = 9e-19
 Identities = 46/170 (27%), Positives = 73/170 (42%), Gaps = 13/170 (7%)

Query: 54  SINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVP 113
            INP+TG+ +A V   +  D  R + ++RAA+  W A     R  ++R++   LR     
Sbjct: 1   VINPATGQVLARVPAASAADVDRAVAAARAAFPEWRATTPLERARMLRELATRLREHAEE 60

Query: 114 LGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGV 173
           L  + +L+ G  ++  +G+V     + DY  GL     G  +P     ++      P GV
Sbjct: 61  LALIDALDCGNPVSAMLGDVMVAAALLDYFAGLVTELKGETIPVG-GRNLHYTLREPYGV 119

Query: 174 VGIISAFNFPVAVYGWNAAIALV-GVAV------QS-----RFGKLLLEL 211
           V  I AFN P+       A  L  G  V      Q+     R  +L  E+
Sbjct: 120 VARIVAFNHPLMFAAAKIAAPLAAGNTVVVKPPEQAPLSALRLAELAREV 169

Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. Length = 456

>gnl|CDD|143411 cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like

 Score = 87.0 bits (216), Expect = 1e-18
 Identities = 52/169 (30%), Positives = 71/169 (42%), Gaps = 58/169 (34%)

Query: 209 LELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKKKID---------- 258
           LELGG   +IV +DADL+ A   +  A    AGQ CT   R+++H+   D          
Sbjct: 225 LELGGKAPVIVFDDADLDAAVAGIATAGYYNAGQDCTAACRVYVHESVYDEFVAALVEAV 284

Query: 259 ---RPGY----------------------FVE-----------------------PTIVT 270
              R G                       FVE                       PT+V 
Sbjct: 285 SAIRVGDPDDEDTEMGPLNSAAQRERVAGFVERAPAHARVLTGGRRAEGPGYFYEPTVVA 344

Query: 271 GLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDV 319
           G+  +  +V  E F P+V V PFD  DEAI   N+V+ GL+SS++T+DV
Sbjct: 345 GVAQDDEIVQEEIFGPVVTVQPFDDEDEAIELANDVEYGLASSVWTRDV 393

NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. Length = 450

>gnl|CDD|183918 PRK13252, PRK13252, betaine aldehyde dehydrogenase; Provisional

 Score = 86.1 bits (214), Expect = 2e-18
 Identities = 49/150 (32%), Positives = 75/150 (50%), Gaps = 2/150 (1%)

Query: 47  ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDA 106
            +GE    INP+TGE +A+VQ     D    + S++     WAA+ A  R  I+R+  D 
Sbjct: 19  TSGETFEVINPATGEVLATVQAATPADVEAAVASAKQGQKIWAAMTAMERSRILRRAVDI 78

Query: 107 LRHKLVPLGQLVSLEMGKILAEGI-GEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLL 165
           LR +   L  L +L+ GK + E    ++    D+ +Y  GL+    G  +P  R G  + 
Sbjct: 79  LRERNDELAALETLDTGKPIQETSVVDIVTGADVLEYYAGLAPALEGEQIPL-RGGSFVY 137

Query: 166 ENWNPLGVVGIISAFNFPVAVYGWNAAIAL 195
               PLGV   I A+N+P+ +  W +A AL
Sbjct: 138 TRREPLGVCAGIGAWNYPIQIACWKSAPAL 167

Length = 488

>gnl|CDD|143443 cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA

 Score = 85.3 bits (212), Expect = 5e-18
 Identities = 51/152 (33%), Positives = 71/152 (46%), Gaps = 3/152 (1%)

Query: 47  ANGEIIPSINPSTGE-TIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGD 105
             GE  P I+P+  E TI  V   + +D    +  + AA+A W+A P   R EI+ +  D
Sbjct: 43  ETGEGAPVIDPADHERTIGEVSLADAEDVDAALAIAAAAFAGWSATPVEERAEILEKAAD 102

Query: 106 ALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICD-YAVGLSRTYSGSILPSERPGHVL 164
            L      L  L + E GK LA+   EV+E ID C  YA      +S   LP    G + 
Sbjct: 103 LLEANRGELIALAAAEAGKTLADADAEVREAIDFCRYYAAQARELFSDPELPGPT-GELN 161

Query: 165 LENWNPLGVVGIISAFNFPVAVYGWNAAIALV 196
               +  GV   IS +NFP+A++    A AL 
Sbjct: 162 GLELHGRGVFVCISPWNFPLAIFTGQIAAALA 193

The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Length = 518

>gnl|CDD|184426 PRK13968, PRK13968, putative succinate semialdehyde dehydrogenase; Provisional

 Score = 84.5 bits (209), Expect = 7e-18
 Identities = 70/274 (25%), Positives = 106/274 (38%), Gaps = 83/274 (30%)

Query: 54  SINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVP 113
           S+NP+TGE ++ +      D    ++ + A +  W       R + +R IG ALR +   
Sbjct: 11  SVNPATGEQLSVLPWAGADDIENALQLAAAGFRDWRETNIDYRAQKLRDIGKALRARSEE 70

Query: 114 LGQLVSLEMGKILAEGIGEVQEFIDICD-YAVGLSRTYSGSILPSERPGHVLLEN----- 167
           + Q+++ EMGK + +   EV +  ++CD YA      +  ++L +E     L+EN     
Sbjct: 71  MAQMITREMGKPINQARAEVAKSANLCDWYA-----EHGPAMLKAEP---TLVENQQAVI 122

Query: 168 -WNPLGVVGIISAFNFPV------------------------------------------ 184
            + PLG +  I  +NFP+                                          
Sbjct: 123 EYRPLGTILAIMPWNFPLWQVMRGAVPILLAGNGYLLKHAPNVMGCAQLIAQVFKDAGIP 182

Query: 185 -AVYGW-NAA------------IALVGVAVQSRFG------------KLLLELGGNNAII 218
             VYGW NA             IA V V    R G            K +LELGG++  I
Sbjct: 183 QGVYGWLNADNDGVSQMINDSRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFI 242

Query: 219 VNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFL 252
           V  DADL LA +  V       GQ C   +R  +
Sbjct: 243 VLNDADLELAVKAAVAGRYQNTGQVCAAAKRFII 276

Length = 462

>gnl|CDD|143460 cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like

 Score = 84.5 bits (209), Expect = 8e-18
 Identities = 54/183 (29%), Positives = 83/183 (45%), Gaps = 20/183 (10%)

Query: 47  ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAY--AAWAALPAPRRGEIVRQIG 104
           A+G+  P+I+P  GE IA V +G+ +D  R ++++R A+    W  +    R  I+ +  
Sbjct: 16  ASGKTFPTIDPRNGEVIAHVAEGDAEDVDRAVKAARKAFDEGPWPRMTGYERSRILLRFA 75

Query: 105 DALRHKLVPLGQLVSLEMGKILAEG-IGEVQEFIDICDYAVGLSRTYSGSILPSERPGHV 163
           D L      L  L + + GK   +    EV     +  Y  G +    G  LP++ P HV
Sbjct: 76  DLLEKHADELAALETWDNGKPYEQARYAEVPLAARLFRYYAGWADKIHGMTLPADGPHHV 135

Query: 164 --LLENWNPLGVVGIISAFNFPVAVYGWNAAIAL-------VGVAVQSRF-----GKLLL 209
             L E   P+GVVG I  +NFP+ ++ W    AL       +  A Q+        KL  
Sbjct: 136 YTLHE---PIGVVGQIIPWNFPLLMFAWKVGPALACGNTIVLKPAEQTPLSALLAAKLAA 192

Query: 210 ELG 212
           E G
Sbjct: 193 EAG 195

Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Length = 476

>gnl|CDD|143415 cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like

 Score = 84.2 bits (209), Expect = 9e-18
 Identities = 38/120 (31%), Positives = 61/120 (50%), Gaps = 15/120 (12%)

Query: 255 KKIDRP--GYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSS 312
           +++ RP  GY++ P +  G+ ++ R+   E F P+  V      DEA+   N+ + GLS+
Sbjct: 348 ERLKRPDEGYYLAPALFAGVTNDMRIAREEIFGPVAAVIRVRDYDEALAIANDTEFGLSA 407

Query: 313 SIFTKDVTNL-----FKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTG-GGRESGSD 366
            I T   T+L     FK    +  + G++ VN+PT G +    FGG K +  G RE G  
Sbjct: 408 GIVT---TSLKHATHFK----RRVEAGVVMVNLPTAGVDYHVPFGGRKGSSYGPREQGEA 460

Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. Length = 473

>gnl|CDD|215259 PLN02466, PLN02466, aldehyde dehydrogenase family 2 member

 Score = 84.5 bits (209), Expect = 1e-17
 Identities = 107/469 (22%), Positives = 168/469 (35%), Gaps = 160/469 (34%)

Query: 47  ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAY--AAWAALPAPRRGEIVRQIG 104
           A+G+  P+++P TGE IA V +G+ +D +R + ++R A+    W  + A  R  I+ +  
Sbjct: 70  ASGKTFPTLDPRTGEVIAHVAEGDAEDVNRAVAAARKAFDEGPWPKMTAYERSRILLRFA 129

Query: 105 DALRHKLVPLGQLVSLEMGKILAEGIG-EVQEFIDICDYAVGLSRT-------------- 149
           D L      L  L + + GK   +    E+  F  +  Y  G +                
Sbjct: 130 DLLEKHNDELAALETWDNGKPYEQSAKAELPMFARLFRYYAGWADKIHGLTVPADGPHHV 189

Query: 150 --------YSGSILPSERP---------------------------------GHVLLENW 168
                    +G I+P   P                                   +L E  
Sbjct: 190 QTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYAAKLLHEAG 249

Query: 169 NPLGVVGIISAFNFPVAVYGWNAAIA-------------------LVGVAVQSRFGKLLL 209
            P GV+ ++S F  P A     AA+A                   ++ +A +S    + L
Sbjct: 250 LPPGVLNVVSGFG-PTA----GAALASHMDVDKLAFTGSTDTGKIVLELAAKSNLKPVTL 304

Query: 210 ELGGNNAIIVNEDADLN----LAQQCLVF----ACCGTAGQRCTTTRRL---FLHKKK-- 256
           ELGG +  IV EDAD++    LA   L F     CC  AG R     R+   F+ K K  
Sbjct: 305 ELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCC--AGSRTFVHERVYDEFVEKAKAR 362

Query: 257 -------------------IDR-----------------------------PGYFVEPTI 268
                              ID                               GY+++PT+
Sbjct: 363 ALKRVVGDPFKKGVEQGPQIDSEQFEKILRYIKSGVESGATLECGGDRFGSKGYYIQPTV 422

Query: 269 VTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDV---TNLFKW 325
            + +  +  +   E F P+  +  F  LDE I   N  + GL++ +FT+++     L + 
Sbjct: 423 FSNVQDDMLIAQDEIFGPVQSILKFKDLDEVIRRANNTRYGLAAGVFTQNLDTANTLSRA 482

Query: 326 L--GPQGSDC-GLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQY 371
           L  G    +C  + +  IP         FGG K +G GRE G  S   Y
Sbjct: 483 LRVGTVWVNCFDVFDAAIP---------FGGYKMSGIGREKGIYSLNNY 522

Length = 538

>gnl|CDD|143428 cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like

 Score = 83.6 bits (207), Expect = 1e-17
 Identities = 39/147 (26%), Positives = 66/147 (44%), Gaps = 9/147 (6%)

Query: 55  INPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPL 114
           INP+T  TI  +     +D    + ++R A+  W       R + +R I + +R +   L
Sbjct: 2   INPATEATIGEIPAATAEDVDAAVRAARRAFPRWKKTTGAERAKYLRAIAEGVRERREEL 61

Query: 115 GQLVSLEMGKILAEGIGEVQEFIDICDYAVGLS---RTYSGSILPSERPG---HVLLENW 168
            +L + + GK L E   +V +     +Y   L+      +   +P         V  E  
Sbjct: 62  AELEARDNGKPLDEAAWDVDDVAGCFEYYADLAEQLDAKAERAVPLPSEDFKARVRRE-- 119

Query: 169 NPLGVVGIISAFNFPVAVYGWNAAIAL 195
            P+GVVG+I+ +NFP+ +  W  A AL
Sbjct: 120 -PVGVVGLITPWNFPLLMAAWKVAPAL 145

Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. Length = 456

>gnl|CDD|143470 cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde dehydrogenase II-like

 Score = 83.5 bits (207), Expect = 2e-17
 Identities = 44/125 (35%), Positives = 56/125 (44%), Gaps = 1/125 (0%)

Query: 60  GETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVS 119
           G  +  V   +  D  R    + AA  AWAA P   R  ++R+  D L      +   + 
Sbjct: 1   GAVLGEVGVADAADVDRAAARAAAAQRAWAATPPRERAAVLRRAADLLEEHADEIADWIV 60

Query: 120 LEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISA 179
            E G I  +   EV   I     A GL     G ILPS  PG + L    PLGVVG+IS 
Sbjct: 61  RESGSIRPKAGFEVGAAIGELHEAAGLPTQPQGEILPSA-PGRLSLARRVPLGVVGVISP 119

Query: 180 FNFPV 184
           FNFP+
Sbjct: 120 FNFPL 124

NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. Length = 443

>gnl|CDD|143427 cd07109, ALDH_AAS00426, Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like

 Score = 82.7 bits (205), Expect = 3e-17
 Identities = 41/119 (34%), Positives = 60/119 (50%), Gaps = 2/119 (1%)

Query: 261 GYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVT 320
           GYFV PT++  +P +SR+   E F P++ V PFD   EAI   N    GL + ++T+D  
Sbjct: 338 GYFVAPTLLDDVPPDSRLAQEEIFGPVLAVMPFDDEAEAIALANGTDYGLVAGVWTRDGD 397

Query: 321 NLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTI 379
                +  +    G + VN    G  I   FGG K +G GRE G ++   Y +  TV +
Sbjct: 398 RAL-RVA-RRLRAGQVFVNNYGAGGGIELPFGGVKKSGHGREKGLEALYNYTQTKTVAV 454

Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. Length = 454

>gnl|CDD|237391 PRK13473, PRK13473, gamma-aminobutyraldehyde dehydrogenase; Provisional

 Score = 82.6 bits (205), Expect = 3e-17
 Identities = 28/65 (43%), Positives = 42/65 (64%)

Query: 255 KKIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSI 314
           +  D  GY+ EPT++ G   +  +V RE F P+V V PFD  D+A+ W N+   GL+SS+
Sbjct: 351 EAPDGKGYYYEPTLLAGARQDDEIVQREVFGPVVSVTPFDDEDQAVRWANDSDYGLASSV 410

Query: 315 FTKDV 319
           +T+DV
Sbjct: 411 WTRDV 415

Length = 475

>gnl|CDD|143432 cd07114, ALDH_DhaS, Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like

 Score = 81.8 bits (203), Expect = 5e-17
 Identities = 41/120 (34%), Positives = 68/120 (56%), Gaps = 5/120 (4%)

Query: 261 GYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVT 320
           GYF EPTI+  + ++ R+   E F P++ V PFD  +EAI   N+ + GL++ I+T+D+ 
Sbjct: 342 GYFFEPTILADVTNDMRIAQEEVFGPVLSVIPFDDEEEAIALANDSEYGLAAGIWTRDLA 401

Query: 321 NLFKWLGPQGSDCGLINVNIPTNGA-EIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTI 379
              +    +  + G + VN  T  A      FGG K +G GRE+G ++ ++Y +  +V I
Sbjct: 402 RAHRV--ARAIEAGTVWVN--TYRALSPSSPFGGFKDSGIGRENGIEAIREYTQTKSVWI 457

Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. Length = 457

>gnl|CDD|237018 PRK11905, PRK11905, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

 Score = 82.2 bits (204), Expect = 7e-17
 Identities = 48/158 (30%), Positives = 74/158 (46%), Gaps = 16/158 (10%)

Query: 46  KANGEIIPSINPS-TGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIG 104
             +G   P +NP+   + + +V + + +D  R + +++AA+  W+A PA  R  I+ +  
Sbjct: 563 DVDGGTRPVLNPADHDDVVGTVTEASAEDVERALAAAQAAFPEWSATPAAERAAILERAA 622

Query: 105 DALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICD-YAVGLSRTYSGSILPSERPGHV 163
           D +   +  L  L   E GK LA  I EV+E +D    YA    R  +G           
Sbjct: 623 DLMEAHMPELFALAVREAGKTLANAIAEVREAVDFLRYYAAQARRLLNGPGHK------- 675

Query: 164 LLENWNPLGVVGIISAFNFPVAVYGWNAAIALV-GVAV 200
                 PLG V  IS +NFP+A++    A ALV G  V
Sbjct: 676 ------PLGPVVCISPWNFPLAIFTGQIAAALVAGNTV 707

Length = 1208

>gnl|CDD|143430 cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like

 Score = 81.5 bits (202), Expect = 8e-17
 Identities = 37/123 (30%), Positives = 63/123 (51%), Gaps = 3/123 (2%)

Query: 257 IDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFT 316
            +  G+FVEPT+  G+  + R+   E F P++ V  FDS +EA+   N+   GL++S++T
Sbjct: 343 TETGGFFVEPTVFDGVTPDMRIAREEIFGPVLSVITFDSEEEAVALANDSVYGLAASVWT 402

Query: 317 KDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRST 376
            D++   +    +    G + VN   +  +I   FGG K +G GR+    +  +Y    T
Sbjct: 403 SDLSRAHR--VARRLRAGTVWVNC-FDEGDITTPFGGFKQSGNGRDKSLHALDKYTELKT 459

Query: 377 VTI 379
             I
Sbjct: 460 TWI 462

NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. Length = 462

>gnl|CDD|143442 cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA

 Score = 81.5 bits (202), Expect = 9e-17
 Identities = 58/244 (23%), Positives = 96/244 (39%), Gaps = 68/244 (27%)

Query: 201 QSRFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKKKIDR- 259
           Q    +++ E+GG NAIIV+EDADL+ A + +V +  G  GQ+C+   R+ +H+   D  
Sbjct: 272 QKWLKRVIAEMGGKNAIIVDEDADLDEAAEGIVRSAFGFQGQKCSACSRVIVHESVYDEF 331

Query: 260 ------------------PGYFVEPTI--------------------------------- 268
                             P  ++ P I                                 
Sbjct: 332 LERLVERTKALKVGDPEDPEVYMGPVIDKGARDRIRRYIEIGKSEGRLLLGGEVLELAAE 391

Query: 269 --------VTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVT 320
                      +P + R+   E F P++ V      DEA+   N+ + GL+  +F++   
Sbjct: 392 GYFVQPTIFADVPPDHRLAQEEIFGPVLAVIKAKDFDEALEIANDTEYGLTGGVFSRSPE 451

Query: 321 NL--FKWLGPQGSDCGLINVNIPTNGAEIG-GAFGGEKYTG-GGRESGSDSWKQYCRRST 376
           +L   +    +  + G +  N    GA +G   FGG K +G G +  G D   Q+ +  T
Sbjct: 452 HLERAR----REFEVGNLYANRKITGALVGRQPFGGFKMSGTGSKAGGPDYLLQFMQPKT 507

Query: 377 VTIN 380
           VT N
Sbjct: 508 VTEN 511

Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. Length = 512

>gnl|CDD|143438 cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like

 Score = 80.5 bits (199), Expect = 2e-16
 Identities = 48/134 (35%), Positives = 69/134 (51%), Gaps = 4/134 (2%)

Query: 54  SINPSTGETIASVQQGNVQDYHRCIESSRAAY--AAWAALPAPRRGEIVRQIGDALRHKL 111
           SI+P+TGE I +   G V +    I ++R A+    WA  P   R  ++ ++ DA     
Sbjct: 1   SIDPATGEVIGTYADGGVAEAEAAIAAARRAFDETDWAHDPR-LRARVLLELADAFEANA 59

Query: 112 VPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPL 171
             L +L++LE GKIL E   E+   I    Y  GL+RT +G ++  E PG   L    P+
Sbjct: 60  ERLARLLALENGKILGEARFEISGAISELRYYAGLARTEAGRMIEPE-PGSFSLVLREPM 118

Query: 172 GVVGIISAFNFPVA 185
           GV GII  +N PV 
Sbjct: 119 GVAGIIVPWNSPVV 132

Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. Length = 455

>gnl|CDD|132260 TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semialdehyde dehydrogenase

 Score = 80.2 bits (198), Expect = 2e-16
 Identities = 44/126 (34%), Positives = 68/126 (53%), Gaps = 15/126 (11%)

Query: 261 GYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVT 320
           G +V+PTI TGLP ++RVV  E F P  ++ PFDS +E I   N+   GL++S++T+D++
Sbjct: 364 GAWVQPTIWTGLPDSARVVTEEIFGPCCHIAPFDSEEEVIALANDTPYGLAASVWTEDLS 423

Query: 321 NLFKWLGPQGSDCGLINVN------IPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRR 374
              +    +  + G++ VN      + T        FGG K +G GRE G  S + Y   
Sbjct: 424 RAHRV--ARQMEVGIVWVNSWFLRDLRT-------PFGGSKLSGIGREGGVHSLEFYTEL 474

Query: 375 STVTIN 380
           + V I 
Sbjct: 475 TNVCIK 480

Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation [Energy metabolism, Other]. Length = 481

>gnl|CDD|143408 cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins

 Score = 80.0 bits (198), Expect = 2e-16
 Identities = 60/241 (24%), Positives = 95/241 (39%), Gaps = 68/241 (28%)

Query: 196 VGVAVQSRFG----KLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLF 251
           VG  + ++      ++LLELGG +A IV +DADL  A    V  C   AGQ C  T RL 
Sbjct: 214 VGRRIMAQAAATLKRVLLELGGKSANIVLDDADLAAAAPAAVGVCMHNAGQGCALTTRLL 273

Query: 252 LHKKKIDR-------------------PGYFVEP----------------------TIVT 270
           + + + D                    PG  + P                       +VT
Sbjct: 274 VPRSRYDEVVEALAAAFEALPVGDPADPGTVMGPLISAAQRDRVEGYIARGRDEGARLVT 333

Query: 271 G--------------------LPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGL 310
           G                    + ++ R+   E F P++ V P+D  DEA+   N+   GL
Sbjct: 334 GGGRPAGLDKGFYVEPTLFADVDNDMRIAQEEIFGPVLVVIPYDDDDEAVRIANDSDYGL 393

Query: 311 SSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQ 370
           S  +++ DV   ++    +    G + +N    G      FGG K +G GRE+G +  ++
Sbjct: 394 SGGVWSADVDRAYRV--ARRIRTGSVGIN-GGGGYGPDAPFGGYKQSGLGRENGIEGLEE 450

Query: 371 Y 371
           +
Sbjct: 451 F 451

The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. Length = 459

>gnl|CDD|183050 PRK11241, gabD, succinate-semialdehyde dehydrogenase I; Provisional

 Score = 80.0 bits (197), Expect = 3e-16
 Identities = 49/151 (32%), Positives = 75/151 (49%), Gaps = 6/151 (3%)

Query: 48  NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDAL 107
           NGE+I   NP+ G+ + SV +    +    I+++  A  AW AL A  R  I+R+  + +
Sbjct: 24  NGEVIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERANILRRWFNLM 83

Query: 108 RHKLVPLGQLVSLEMGKILAEGIGEVQ---EFIDICDYAVGLSRTYSGSILPSERPGHVL 164
                 L +L++LE GK LAE  GE+     FI+   +A    R Y G  +P  +    L
Sbjct: 84  MEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEW--FAEEGKRIY-GDTIPGHQADKRL 140

Query: 165 LENWNPLGVVGIISAFNFPVAVYGWNAAIAL 195
           +    P+GV   I+ +NFP A+    A  AL
Sbjct: 141 IVIKQPIGVTAAITPWNFPAAMITRKAGPAL 171

Length = 482

>gnl|CDD|143409 cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1

 Score = 79.3 bits (196), Expect = 4e-16
 Identities = 46/148 (31%), Positives = 74/148 (50%), Gaps = 15/148 (10%)

Query: 55  INPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPL 114
           I P+TGE +A+V     +D    ++S++AA   W+A     RG I+R+  D LR +   +
Sbjct: 2   IEPATGEVLATVHCAGAEDVDLAVKSAKAAQKEWSATSGMERGRILRKAADLLRERNDEI 61

Query: 115 GQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWN----- 169
            +L +++ GK + E   ++    D  +Y  GL+ T SG         HV L   +     
Sbjct: 62  ARLETIDNGKPIEEARVDIDSSADCLEYYAGLAPTLSGE--------HVPLPGGSFAYTR 113

Query: 170 --PLGVVGIISAFNFPVAVYGWNAAIAL 195
             PLGV   I A+N+P+ +  W +A AL
Sbjct: 114 REPLGVCAGIGAWNYPIQIASWKSAPAL 141

NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. Length = 457

>gnl|CDD|188167 TIGR01780, SSADH, succinate-semialdehyde dehydrogenase

 Score = 79.0 bits (195), Expect = 4e-16
 Identities = 34/117 (29%), Positives = 61/117 (52%), Gaps = 3/117 (2%)

Query: 255 KKIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSI 314
           K+ +  G F EPT+++ +  +  V   ETF P+  VF FD  +E I   N+ + GL++  
Sbjct: 331 KRHELGGNFFEPTVLSNVTADMLVSKEETFGPLAPVFKFDDEEEVIAIANDTEVGLAAYF 390

Query: 315 FTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQY 371
           F++D++ +  W   +  + G++ +N       +   FGG K +G GRE      ++Y
Sbjct: 391 FSRDLSRI--WRVAEALEYGMVGINTGLISNVV-APFGGVKQSGLGREGSKYGIEEY 444

Succinic semialdehyde dehydrogenase is one of three enzymes constituting 4-aminobutyrate (GABA) degradation in both prokaryotes and eukaryotes, catalyzing the (NAD(P)+)-dependent catabolism reaction of succinic semialdehyde to succinate for metabolism by the citric acid cycle. The EC number depends on the cofactor: 1.2.1.24 for NAD only, 1.2.1.79 for NADP only, and 1.2.1.16 if both can be used. In Escherichia coli, succinic semialdehyde dehydrogenase is located in an unidirectionally transcribed gene cluster encoding enzymes for GABA degradation and is suggested to be cotranscribed with succinic semialdehyde transaminase from a common promoter upstream of SSADH. Similar gene arrangements can be found in characterized Ralstonia eutropha and the genome analysis of Bacillus subtilis. Prokaryotic succinic semialdehyde dehydrogenases (1.2.1.16) share high sequence homology to characterized succinic semialdehyde dehydrogenases from rat and human (1.2.1.24), exhibiting conservation of proposed cofactor binding residues, and putative active sites (G-237 & G-242, C-293 & G-259 respectively of rat SSADH). Eukaryotic SSADH enzymes exclusively utilize NAD+ as a cofactor, exhibiting little to no NADP+ activity. While a NADP+ preference has been detected in prokaryotes in addition to both NADP+- and NAD+-dependencies as in E.coli, Pseudomonas, and Klebsiella pneumoniae. The function of this alternative SSADH currently is unknown, but has been suggested to play a possible role in 4-hydroxyphenylacetic degradation. Just outside the scope of this model, are several sequences belonging to clades scoring between trusted and noise. These sequences may be actual SSADH enzymes, but lack sufficiently close characterized homologs to make a definitive assignment at this time. SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070) [Central intermediary metabolism, Other]. Length = 448

>gnl|CDD|143427 cd07109, ALDH_AAS00426, Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like

 Score = 78.8 bits (195), Expect = 5e-16
 Identities = 65/272 (23%), Positives = 97/272 (35%), Gaps = 73/272 (26%)

Query: 54  SINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWA-ALPAPRRGEIVRQIGDALRHKLV 112
             +PSTGE  A + +G   D  R ++++R A+ +    L    RG ++ +I   +R    
Sbjct: 1   VFDPSTGEVFARIARGGAADVDRAVQAARRAFESGWLRLSPAERGRLLLRIARLIREHAD 60

Query: 113 PLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSE---------RP--- 160
            L +L SL+ GK L +   +V+      +Y  G +    G  +P            P   
Sbjct: 61  ELARLESLDTGKPLTQARADVEAAARYFEYYGGAADKLHGETIPLGPGYFVYTVREPHGV 120

Query: 161 -GHVLLENWN-PLGVVG------------------------------IISAFNFPVAV-- 186
            GH++   WN PL + G                              +      P     
Sbjct: 121 TGHII--PWNYPLQITGRSVAPALAAGNAVVVKPAEDAPLTALRLAELAEEAGLPAGALN 178

Query: 187 ----YGWNAAIAL----------------VGVAVQ----SRFGKLLLELGGNNAIIVNED 222
                G  A  AL                 G+AV          + LELGG +  IV  D
Sbjct: 179 VVTGLGAEAGAALVAHPGVDHISFTGSVETGIAVMRAAAENVVPVTLELGGKSPQIVFAD 238

Query: 223 ADLNLAQQCLVFACCGTAGQRCTTTRRLFLHK 254
           ADL  A   +V A    AGQ C+   RL +H+
Sbjct: 239 ADLEAALPVVVNAIIQNAGQTCSAGSRLLVHR 270

Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. Length = 454

>gnl|CDD|130783 TIGR01722, MMSDH, methylmalonic acid semialdehyde dehydrogenase

 Score = 79.2 bits (195), Expect = 5e-16
 Identities = 36/150 (24%), Positives = 67/150 (44%)

Query: 47  ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDA 106
           A+G  IP  NP+T E    V   +V +    + S+R  +  W      +R  ++ +    
Sbjct: 13  ASGTYIPVTNPATNEVTTKVAFASVDEVDAAVASARETFLTWGQTSLAQRTSVLLRYQAL 72

Query: 107 LRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLE 166
           L+     + +L++ E GK  ++ +G+V   +++ ++A G++    G           +  
Sbjct: 73  LKEHRDEIAELITAEHGKTHSDALGDVARGLEVVEHACGVNSLLKGETSTQVATRVDVYS 132

Query: 167 NWNPLGVVGIISAFNFPVAVYGWNAAIALV 196
              PLGV   I+ FNFP  +  W   IA+ 
Sbjct: 133 IRQPLGVCAGITPFNFPAMIPLWMFPIAIA 162

Involved in valine catabolism, methylmalonate-semialdehyde dehydrogenase catalyzes the irreversible NAD+- and CoA-dependent oxidative decarboxylation of methylmalonate semialdehyde to propionyl-CoA. Methylmalonate-semialdehyde dehydrogenase has been characterized in both prokaryotes and eukaryotes, functioning as a mammalian tetramer and a bacterial homodimer. Although similar in monomeric molecular mass and enzymatic activity, the N-terminal sequence in P.aeruginosa does not correspond with the N-terminal sequence predicted for rat liver. Sequence homology to a variety of prokaryotic and eukaryotic aldehyde dehydrogenases places MMSDH in the aldehyde dehydrogenase (NAD+) superfamily (pfam00171), making MMSDH's CoA requirement unique among known ALDHs. Methylmalonate semialdehyde dehydrogenase is closely related to betaine aldehyde dehydrogenase, 2-hydroxymuconic semialdehyde dehydrogenase, and class 1 and 2 aldehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus [Energy metabolism, Amino acids and amines]. Length = 477

>gnl|CDD|143467 cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1

 Score = 78.4 bits (194), Expect = 7e-16
 Identities = 37/140 (26%), Positives = 64/140 (45%), Gaps = 10/140 (7%)

Query: 52  IPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKL 111
           I  I+P  GE I  V   + +D  + I +++       +LPA  R EI+ +    L  + 
Sbjct: 1   IEVISPYDGEVIGRVPVASEEDVEKAIAAAKEGAKEMKSLPAYERAEILERAAQLLEERR 60

Query: 112 VPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSE-------RPGHVL 164
               + ++LE GK + +   EV   I+    +   ++  +G  +P +       R G  +
Sbjct: 61  EEFARTIALEAGKPIKDARKEVDRAIETLRLSAEEAKRLAGETIPFDASPGGEGRIGFTI 120

Query: 165 LENWNPLGVVGIISAFNFPV 184
            E   P+GVV  I+ FNFP+
Sbjct: 121 RE---PIGVVAAITPFNFPL 137

Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 453

>gnl|CDD|143431 cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like

 Score = 78.6 bits (194), Expect = 7e-16
 Identities = 39/125 (31%), Positives = 67/125 (53%), Gaps = 3/125 (2%)

Query: 255 KKIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSI 314
           + +   GYFV+PT+V     +SR++  ETF P+V   P++  +E I   N+   GL++S+
Sbjct: 354 EALAGEGYFVQPTLVLARSADSRLMREETFGPVVSFVPYEDEEELIQLINDTPFGLTASV 413

Query: 315 FTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRR 374
           +T +++   +++     + G + VN+ T   +    FGG K +G GRE GS     Y   
Sbjct: 414 WTNNLSKALRYI--PRIEAGTVWVNMHTF-LDPAVPFGGMKQSGIGREFGSAFIDDYTEL 470

Query: 375 STVTI 379
            +V I
Sbjct: 471 KSVMI 475

NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. Length = 477

>gnl|CDD|143469 cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like

 Score = 78.1 bits (193), Expect = 9e-16
 Identities = 47/146 (32%), Positives = 65/146 (44%), Gaps = 10/146 (6%)

Query: 41  DGTSWKANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIV 100
           DGTS       I  +NP TGET+A +   + +D      ++ AA   WAA     R EI+
Sbjct: 5   DGTS----ERTIDVLNPYTGETLAEIPAASKEDVDEAYRAAAAAQKEWAATLPQERAEIL 60

Query: 101 RQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERP 160
            +    L  +   + + +  E G    +   E    + I   A        G ILPS+ P
Sbjct: 61  EKAAQILEERRDEIVEWLIRESGSTRIKANIEWGAAMAITREAATFPLRMEGRILPSDVP 120

Query: 161 G---HVLLENWNPLGVVGIISAFNFP 183
           G    V  E   PLGVVG+IS +NFP
Sbjct: 121 GKENRVYRE---PLGVVGVISPWNFP 143

NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. Length = 465

>gnl|CDD|237017 PRK11904, PRK11904, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

 Score = 78.7 bits (195), Expect = 1e-15
 Identities = 51/196 (26%), Positives = 80/196 (40%), Gaps = 21/196 (10%)

Query: 16  YSDSVSKYPFLKELGLSGSVNPGVYDGTSWKA------NGEIIPSINPS-TGETIASVQQ 68
            +D     P    +          +    W+A       GE  P ++P+     +  V  
Sbjct: 530 LNDRSELEPLAAAIAA--------FLEKQWQAGPIINGEGEARPVVSPADRRRVVGEVAF 581

Query: 69  GNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAE 128
            + +   + + ++RAA+ AW+  P   R  I+ +  D L      L  L   E GK L +
Sbjct: 582 ADAEQVEQALAAARAAFPAWSRTPVEERAAILERAADLLEANRAELIALCVREAGKTLQD 641

Query: 129 GIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLEN---WNPLGVVGIISAFNFPVA 185
            I EV+E +D C Y    +R   G+  P + PG     N    +  GV   IS +NFP+A
Sbjct: 642 AIAEVREAVDFCRYYAAQARRLFGA--PEKLPGPTGESNELRLHGRGVFVCISPWNFPLA 699

Query: 186 VYGWNAAIALV-GVAV 200
           ++    A AL  G  V
Sbjct: 700 IFLGQVAAALAAGNTV 715

Length = 1038

>gnl|CDD|143463 cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like

 Score = 77.4 bits (191), Expect = 1e-15
 Identities = 59/281 (20%), Positives = 104/281 (37%), Gaps = 73/281 (25%)

Query: 52  IPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKL 111
           I   NP+ GE I +V   + ++    IE +  A    + LPA +R +I+ ++ + +  + 
Sbjct: 1   IEVRNPANGEVIDTVPSLSREEVREAIEVAEKAKDVMSNLPAYKRYKILMKVAELIERRK 60

Query: 112 VPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSE----RPGHVLLEN 167
             L +L+++E+GK + +   EV+  I +   A   ++   G  +P +        +    
Sbjct: 61  EELAKLLTIEVGKPIKQSRVEVERTIRLFKLAAEEAKVLRGETIPVDAYEYNERRIAFTV 120

Query: 168 WNPLGVVGIISAFNFPVAVYGWNAAIAL-VGVAV-----------QSRFGKLLLELG--- 212
             P+GVVG I+ FNFP  ++    A A+ VG +V                K+L E G   
Sbjct: 121 REPIGVVGAITPFNFPANLFAHKIAPAIAVGNSVVVKPSSNTPLTAIELAKILEEAGLPP 180

Query: 213 -------GNNAIIVNE-------------------------------------------- 221
                  G  + + +E                                            
Sbjct: 181 GVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVGLLIASKAGGTGKKVALELGGSDPMI 240

Query: 222 ---DADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKKKIDR 259
              DADL  A    V      AGQ C   +R+ + ++  D+
Sbjct: 241 VLKDADLERAVSIAVRGRFENAGQVCNAVKRILVEEEVYDK 281

NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. Length = 456

>gnl|CDD|143422 cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins

 Score = 77.2 bits (191), Expect = 2e-15
 Identities = 42/112 (37%), Positives = 55/112 (49%)

Query: 73  DYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGE 132
           D  R   ++ AA  AWAA P   R  I+R+  + L  +   +   +  E G    +   E
Sbjct: 1   DVDRAYAAAAAAQKAWAATPPQERAAILRKAAEILEERRDEIADWLIRESGSTRPKAAFE 60

Query: 133 VQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPV 184
           V   I I   A GL R   G ILPS+ PG   +    PLGVVG+IS FNFP+
Sbjct: 61  VGAAIAILREAAGLPRRPEGEILPSDVPGKESMVRRVPLGVVGVISPFNFPL 112

ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. Length = 431

>gnl|CDD|143433 cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like

 Score = 77.1 bits (190), Expect = 2e-15
 Identities = 39/126 (30%), Positives = 63/126 (50%), Gaps = 3/126 (2%)

Query: 255 KKIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSI 314
           K+    G+FVEPTI   +P   R+   E F P+V V  F   +EA+   N  + GL++ +
Sbjct: 330 KRPGARGFFVEPTIFAAVPPEMRIAQEEIFGPVVSVMRFRDEEEALRIANGTEYGLAAGV 389

Query: 315 FTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRR 374
           +T+D+    +         G + +N   N  + G  FGG K +G GRE G ++  +Y   
Sbjct: 390 WTRDLGRAHRV--AAALKAGTVWINT-YNRFDPGSPFGGYKQSGFGREMGREALDEYTEV 446

Query: 375 STVTIN 380
            +V +N
Sbjct: 447 KSVWVN 452

4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. Length = 453

>gnl|CDD|143412 cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogenase family 8 member A1-like

 Score = 77.2 bits (191), Expect = 2e-15
 Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 10/147 (6%)

Query: 54  SINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVP 113
           + NP+TGE +A V +G   +    + +++ A+  W+ +    R  I+ ++ D +  +   
Sbjct: 1   NFNPATGEVLAKVPEGGAAEVDAAVAAAKEAFPGWSRMSPAERARILHKVADLIEARADE 60

Query: 114 LGQLVSLEMGKILAEGIGEV-----QEFIDICDYAVGLSRTYSGSILPSERPGHVLLENW 168
           L  L SL+ GK +              F    DY +       G   P +  G +     
Sbjct: 61  LALLESLDTGKPITLARTRDIPRAAANFRFFADYIL----QLDGESYPQD-GGALNYVLR 115

Query: 169 NPLGVVGIISAFNFPVAVYGWNAAIAL 195
            P+GV G+I+ +N P+ +  W  A AL
Sbjct: 116 QPVGVAGLITPWNLPLMLLTWKIAPAL 142

In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. Length = 455

>gnl|CDD|226683 COG4230, COG4230, Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion]

 Score = 77.8 bits (192), Expect = 2e-15
 Identities = 47/151 (31%), Positives = 72/151 (47%), Gaps = 13/151 (8%)

Query: 47  ANGEIIPSINPST-GETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGD 105
           A GE  P INP+   + + +V +    D  + +E++ AA   W+A P   R  I+ +  D
Sbjct: 124 AGGEPRPVINPADPDDIVGTVTEATEADVEQALEAAVAAAPIWSATPPAERAAILERAAD 183

Query: 106 ALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLL 165
            +  ++  L  L+  E GK L+  I EV+E +D   Y  G +R   G+        H   
Sbjct: 184 LMEAQMPQLMGLLVREAGKTLSNAIAEVREAVDFLRYYAGQARDTFGN------LTH--- 234

Query: 166 ENWNPLGVVGIISAFNFPVAVYGWNAAIALV 196
               PLG V  IS +NFP+A++    A AL 
Sbjct: 235 ---RPLGPVVCISPWNFPLAIFTGQIAAALA 262

Length = 769

>gnl|CDD|143407 cd07088, ALDH_LactADH-AldA, Escherichia coli lactaldehyde dehydrogenase AldA-like

 Score = 76.9 bits (190), Expect = 3e-15
 Identities = 25/66 (37%), Positives = 40/66 (60%)

Query: 259 RPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKD 318
             GYF EPT++T +  +  +V  E F P++ V  F SLDEAI   N+ + GL+S I+T++
Sbjct: 351 EKGYFYEPTVLTNVRQDMEIVQEEIFGPVLPVVKFSSLDEAIELANDSEYGLTSYIYTEN 410

Query: 319 VTNLFK 324
           +    +
Sbjct: 411 LNTAMR 416

Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. Length = 468

>gnl|CDD|143462 cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like

 Score = 76.7 bits (189), Expect = 3e-15
 Identities = 42/120 (35%), Positives = 69/120 (57%), Gaps = 3/120 (2%)

Query: 261 GYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVT 320
           GYF+ PTI T +P + R+V  E F P+V +  F + +EAI   N+   GL++++FTKD+ 
Sbjct: 367 GYFIPPTIFTDVPQDMRIVKEEIFGPVVVISKFKTYEEAIKKANDTTYGLAAAVFTKDIR 426

Query: 321 NLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTIN 380
              +    +  + G++ +N  +N +++G  FGG K +G GRE G    + Y +   V IN
Sbjct: 427 RAHRVA--RELEAGMVWIN-SSNDSDVGVPFGGFKMSGIGRELGEYGLETYTQTKAVHIN 483

NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. Length = 484

>gnl|CDD|143417 cd07099, ALDH_DDALDH, Methylomonas sp

 Score = 76.1 bits (188), Expect = 4e-15
 Identities = 46/154 (29%), Positives = 72/154 (46%), Gaps = 12/154 (7%)

Query: 55  INPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPL 114
            NP+TGE +  V   +  +    +  +RAA  AWAAL    R + + +   AL      L
Sbjct: 1   RNPATGEVLGEVPVTDPAEVAAAVARARAAQRAWAALGVEGRAQRLLRWKRALADHADEL 60

Query: 115 GQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSIL-PSERPGHVLLEN------ 167
            +L+  E GK  A+   EV   ++  D+A       +  +L P + P  +L+ N      
Sbjct: 61  AELLHAETGKPRADAGLEVLLALEAIDWAARN----APRVLAPRKVPTGLLMPNKKATVE 116

Query: 168 WNPLGVVGIISAFNFPVAVYGWNAAIALV-GVAV 200
           + P GVVG+IS +N+P+     +   AL  G AV
Sbjct: 117 YRPYGVVGVISPWNYPLLTPMGDIIPALAAGNAV 150

4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. Length = 453

>gnl|CDD|143410 cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins

 Score = 76.5 bits (189), Expect = 4e-15
 Identities = 45/155 (29%), Positives = 72/155 (46%), Gaps = 8/155 (5%)

Query: 47  ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAY--AAWAALPAPRRGEIVRQIG 104
            +G+  P+INP+T E I  V + + +D    ++++RAA+    W  +    RG ++ ++ 
Sbjct: 16  VSGKTFPTINPATEEVICQVAEADEEDVDAAVKAARAAFETGWWRKMDPRERGRLLNKLA 75

Query: 105 DALRHKLVPLGQLVSLEMGKILAEGI-GEVQEFIDICDYAVGLSRTYSGSILPSERPGHV 163
           D +      L  L SL+ GK L E   G+V   I    Y  G +    G  +P +     
Sbjct: 76  DLIERDRDELAALESLDNGKPLEESAKGDVALSIKCLRYYAGWADKIQGKTIPIDGNFLA 135

Query: 164 L--LENWNPLGVVGIISAFNFPVAVYGWNAAIALV 196
               E   P+GV G I  +NFP+ +  W  A AL 
Sbjct: 136 YTRRE---PIGVCGQIIPWNFPLLMLAWKLAPALA 167

ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. Also included in this subfamily is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial, homotetramers that oxidize acetaldehyde and glycolaldehyde, as well as, the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Also included is the AldA aldehyde dehydrogenase of Aspergillus nidulans (locus AN0554), the aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) of Saccharomyces cerevisiae, and other similar sequences. Length = 476

>gnl|CDD|200087 TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative

 Score = 76.4 bits (188), Expect = 4e-15
 Identities = 40/165 (24%), Positives = 68/165 (41%), Gaps = 2/165 (1%)

Query: 33  GSVNPGVYDGTSWKANGEIIPSINPS-TGETIASVQQGNVQDYHRCIESSRAAYAAWAAL 91
           G   P V +G   +   +I+ SINP    E + +V + + +     ++++  A+ AW   
Sbjct: 30  GKTYPLVINGERVETENKIV-SINPCDKSEVVGTVSKASQEHAEHALQAAAKAFEAWKKT 88

Query: 92  PAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYS 151
               R  I+ +    +R +      L+  E+GK   E   EV E ID  +Y        +
Sbjct: 89  DPEERAAILFKAAAIVRRRRHEFSALLVKEVGKPWNEADAEVAEAIDFMEYYARQMIELA 148

Query: 152 GSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALV 196
                + R G      + P GV  +IS +NFP A+        +V
Sbjct: 149 KGKPVNSREGETNQYVYTPTGVTVVISPWNFPFAIMVGMTVAPIV 193

This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs [Energy metabolism, Amino acids and amines]. Length = 511

>gnl|CDD|143465 cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase family 21A1-like

 Score = 76.1 bits (188), Expect = 5e-15
 Identities = 44/136 (32%), Positives = 59/136 (43%), Gaps = 4/136 (2%)

Query: 52  IPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKL 111
           +   NP TGE +A V      D    I ++  A+    ALPA RR  I+      L  + 
Sbjct: 1   LEVTNPYTGEVVARVALAGPDDIEEAIAAAVKAFRPMRALPAHRRAAILLHCVARLEERF 60

Query: 112 VPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILP---SER-PGHVLLEN 167
             L + + LE GK + +  GEV   ID    A   +    G +LP   S R  G   L  
Sbjct: 61  EELAETIVLEAGKPIKDARGEVARAIDTFRIAAEEATRIYGEVLPLDISARGEGRQGLVR 120

Query: 168 WNPLGVVGIISAFNFP 183
             P+G V  I+ FNFP
Sbjct: 121 RFPIGPVSAITPFNFP 136

Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. Length = 452

>gnl|CDD|131352 TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase

 Score = 76.0 bits (187), Expect = 5e-15
 Identities = 38/154 (24%), Positives = 65/154 (42%), Gaps = 15/154 (9%)

Query: 49  GEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALR 108
           GE   +++P+T E + SV +G   D  R  ++++ A+  WA L A  R   + +I D + 
Sbjct: 15  GETFETLSPATNEVLGSVARGGAADVDRAAKAAKEAFKRWAELKAAERKRYLHKIADLIE 74

Query: 109 HKLVPLGQLVSLE-------MGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPG 161
                +  L  L+         + +       + F D C+ A+       G   P     
Sbjct: 75  QHADEIAVLECLDCGQPLRQTRQQVIRAAENFRFFADKCEEAM------DGRTYPV--DT 126

Query: 162 HVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL 195
           H+      P+G VG+I+ +N P  +  W  A AL
Sbjct: 127 HLNYTVRVPVGPVGLITPWNAPFMLSTWKIAPAL 160

This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. Length = 488

>gnl|CDD|143426 cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like

 Score = 74.3 bits (183), Expect = 1e-14
 Identities = 35/121 (28%), Positives = 64/121 (52%), Gaps = 4/121 (3%)

Query: 260 PGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDV 319
            G+FV+PTI +G+ +  R+   E F P++   P+   DE I   N+   GL++ ++T+D+
Sbjct: 340 DGFFVQPTIFSGVDNEWRLAREEIFGPVLCAIPWKDEDEVIAMANDSHYGLAAYVWTRDL 399

Query: 320 TNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSW-KQYCRRSTVT 378
               +       + G + VN    G + G ++GG K +G GRE+  +   + + ++ TV 
Sbjct: 400 GRALR--AAHALEAGWVQVN-QGGGQQPGQSYGGFKQSGLGREASLEGMLEHFTQKKTVN 456

Query: 379 I 379
           I
Sbjct: 457 I 457

NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. Length = 457

>gnl|CDD|143462 cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like

 Score = 74.8 bits (184), Expect = 1e-14
 Identities = 46/153 (30%), Positives = 81/153 (52%), Gaps = 7/153 (4%)

Query: 47  ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAY-AAWAALPAPRRGEIVRQIGD 105
           ++GE I ++NPSTGE IASV     +D  + ++++R A+ + W+ +    RGE++ ++ D
Sbjct: 20  SDGETIKTVNPSTGEVIASVYAAGEEDVDKAVKAARKAFESWWSKVTGEERGELLDKLAD 79

Query: 106 ALRHKLVPLGQLVSLEMGKIL-AEGIGEVQEFIDICDYAVGLSRTYSGSILP--SERPGH 162
            +      L  + +L+ GK   +  +G++ E I +  Y  G +    G  +P    +  +
Sbjct: 80  LVEKNRDLLAAIEALDSGKPYHSNALGDLDEIIAVIRYYAGWADKIQGKTIPTSPNKLAY 139

Query: 163 VLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL 195
            L E   P GV G I  +N+P+A+  W  A AL
Sbjct: 140 TLHE---PYGVCGQIIPWNYPLAMAAWKLAPAL 169

NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. Length = 484

>gnl|CDD|143419 cd07101, ALDH_SSADH2_GabD2, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like

 Score = 75.0 bits (185), Expect = 1e-14
 Identities = 45/156 (28%), Positives = 67/156 (42%), Gaps = 17/156 (10%)

Query: 55  INPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPL 114
             P TGE +  + Q    D       +RAA  AWAA P   R  +  +  D +  +   L
Sbjct: 1   EAPFTGEPLGELPQSTPADVEAAFARARAAQRAWAARPFAERAAVFLRFHDLVLERRDEL 60

Query: 115 GQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYS---GSILPSERPGHVL------L 165
             L+ LE GK           F ++ D A+  +R Y+     +L   R    +       
Sbjct: 61  LDLIQLETGKARR------HAFEEVLDVAIV-ARYYARRAERLLKPRRRRGAIPVLTRTT 113

Query: 166 ENWNPLGVVGIISAFNFPVAVYGWNAAIALV-GVAV 200
            N  P GVVG+IS +N+P+ +   +A  AL+ G AV
Sbjct: 114 VNRRPKGVVGVISPWNYPLTLAVSDAIPALLAGNAV 149

Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). Length = 454

>gnl|CDD|143401 cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11

 Score = 74.9 bits (185), Expect = 1e-14
 Identities = 60/244 (24%), Positives = 88/244 (36%), Gaps = 85/244 (34%)

Query: 207 LLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKKKIDRPGYFVE- 265
           L+LELGG +  IV  DADL LA + +V      +GQRCT  +R+ +H+   D     VE 
Sbjct: 245 LVLELGGKDPAIVLPDADLELAAKEIVKGALSYSGQRCTAIKRVLVHESVADE---LVEL 301

Query: 266 ----------------PTIVTGLP-----------------HNSRVVH------------ 280
                              +T L                    + V++            
Sbjct: 302 LKEEVAKLKVGMPWDNGVDITPLIDPKSADFVEGLIDDAVAKGATVLNGGGREGGNLIYP 361

Query: 281 --------------RETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWL 326
                          E F P++ +   + ++EAI   N+   GL +SIFTKD+    K  
Sbjct: 362 TLLDPVTPDMRLAWEEPFGPVLPIIRVNDIEEAIELANKSNYGLQASIFTKDINKARK-- 419

Query: 327 GPQGSDCGLIN------VNIPTNGAEIGG----AFGGEKYTGGGRESGSDSWKQYCRRST 376
                   L +      VNI  N     G     F G K +G G +   D+ +   RR  
Sbjct: 420 --------LADALEVGTVNI--NSKCQRGPDHFPFLGRKDSGIGTQGIGDALRSMTRRKG 469

Query: 377 VTIN 380
           + IN
Sbjct: 470 IVIN 473

NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. Length = 473

>gnl|CDD|132417 TIGR03374, ABALDH, 1-pyrroline dehydrogenase

 Score = 74.7 bits (183), Expect = 2e-14
 Identities = 41/149 (27%), Positives = 67/149 (44%), Gaps = 1/149 (0%)

Query: 48  NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDAL 107
            GE  P  NP+TGE I  + + + +     + ++ AA+A W       R E + ++ D +
Sbjct: 14  EGEKQPVYNPATGEVILEIAEASAEQVDAAVRAADAAFAEWGQTTPKARAECLLKLADVI 73

Query: 108 RHKLVPLGQLVSLEMGKILAEGIG-EVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLE 166
                   +L S   GK L      E+   +D+  +  G +R  SG        GH  + 
Sbjct: 74  EENAQVFAELESRNCGKPLHSVFNDEIPAIVDVFRFFAGAARCLSGLAAGEYLEGHTSMI 133

Query: 167 NWNPLGVVGIISAFNFPVAVYGWNAAIAL 195
             +PLGVV  I+ +N+P+ +  W  A AL
Sbjct: 134 RRDPLGVVASIAPWNYPLMMAAWKLAPAL 162

Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. Length = 472

>gnl|CDD|143410 cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins

 Score = 73.8 bits (182), Expect = 3e-14
 Identities = 37/141 (26%), Positives = 65/141 (46%), Gaps = 23/141 (16%)

Query: 249 RLFLHKKKIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQ 308
            L    ++    GYF++PT+ T +  + ++   E F P+V +  F + DE I   N+ + 
Sbjct: 349 TLLTGGERHGSKGYFIQPTVFTDVKDDMKIAKEEIFGPVVTILKFKTEDEVIERANDTEY 408

Query: 309 GLSSSIFTKDVTNLFK----------WLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTG 358
           GL++ +FTKD+    +          W+        + +  +P         FGG K +G
Sbjct: 409 GLAAGVFTKDINKALRVSRALKAGTVWVNTY----NVFDAAVP---------FGGFKQSG 455

Query: 359 GGRESGSDSWKQYCRRSTVTI 379
            GRE G +  ++Y +   VTI
Sbjct: 456 FGRELGEEGLEEYTQVKAVTI 476

ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. Also included in this subfamily is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial, homotetramers that oxidize acetaldehyde and glycolaldehyde, as well as, the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Also included is the AldA aldehyde dehydrogenase of Aspergillus nidulans (locus AN0554), the aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) of Saccharomyces cerevisiae, and other similar sequences. Length = 476

>gnl|CDD|131352 TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase

 Score = 73.7 bits (181), Expect = 3e-14
 Identities = 40/124 (32%), Positives = 61/124 (49%), Gaps = 3/124 (2%)

Query: 259 RPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKD 318
             G +V PT+ TG  ++ R+   E F P++ V PF   +EAI   N+ + GL+  ++T D
Sbjct: 359 GRGNYVLPTVFTGADNHMRIAQEEIFGPVLTVIPFKDEEEAIEKANDTRYGLAGYVWTND 418

Query: 319 VTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVT 378
           V    +       + G+I VN   N   +   FGG K +G GRE G+ S+  Y     V 
Sbjct: 419 VGRAHRV--ALALEAGMIWVN-SQNVRHLPTPFGGVKASGIGREGGTYSFDFYTETKNVA 475

Query: 379 INHG 382
           +  G
Sbjct: 476 LALG 479

This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. Length = 488

>gnl|CDD|143436 cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbosone dehydrogenase-like

 Score = 73.9 bits (182), Expect = 3e-14
 Identities = 41/134 (30%), Positives = 71/134 (52%), Gaps = 8/134 (5%)

Query: 55  INPSTGETIASVQQGNVQDYHRCIESSRAAYAA--WAALPAPRRGEIVRQIGDALRHKLV 112
            +P+ G  +A   +G V+D    + ++R A+    W  +    R  ++ ++ D +R +  
Sbjct: 2   RSPAHGVVVARYAEGTVEDVDAAVAAARKAFDKGPWPRMSGAERAAVLLKVADLIRARRE 61

Query: 113 PLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSG---SILPSERPGHVLLENWN 169
            L  + +LE GK +++  GE++   D+  YA  L+RT  G   + L  +  G VL E   
Sbjct: 62  RLALIETLESGKPISQARGEIEGAADLWRYAASLARTLHGDSYNNLGDDMLGLVLRE--- 118

Query: 170 PLGVVGIISAFNFP 183
           P+GVVGII+ +NFP
Sbjct: 119 PIGVVGIITPWNFP 132

Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. Length = 454

>gnl|CDD|143458 cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L

 Score = 73.7 bits (181), Expect = 3e-14
 Identities = 57/244 (23%), Positives = 96/244 (39%), Gaps = 64/244 (26%)

Query: 199 AVQSRFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFL------ 252
              S   K+ LELGG + +I+  D D++ A +  + +     G+ C    RLF+      
Sbjct: 246 CAVSNLKKVSLELGGKSPLIIFADCDMDKAVRMGMSSVFFNKGENCIAAGRLFVEESIHD 305

Query: 253 -----------------------------HKKKID------------------------R 259
                                        HK  +D                        R
Sbjct: 306 EFVRRVVEEVKKMKIGDPLDRSTDHGPQNHKAHLDKLVEYCERGVKEGATLVYGGKQVDR 365

Query: 260 PGYFVEPTIVTGLPHNSRVVHRETFAPIVYV--FPFDSLDEAITWNNEVKQGLSSSIFTK 317
           PG+F EPT+ T +  +  +   E+F PI+ +  F    +D  +   N+ + GL+S +FTK
Sbjct: 366 PGFFFEPTVFTDVEDHMFIAKEESFGPIMIISKFDDGDVDGVLQRANDTEYGLASGVFTK 425

Query: 318 DVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTV 377
           D+            + G + VN   N  ++   FGG K +G G++ G ++  +Y +  TV
Sbjct: 426 DINKALYV--SDKLEAGTVFVNT-YNKTDVAAPFGGFKQSGFGKDLGEEALNEYLKTKTV 482

Query: 378 TINH 381
           TI +
Sbjct: 483 TIEY 486

10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. Length = 486

>gnl|CDD|143457 cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like

 Score = 73.4 bits (181), Expect = 4e-14
 Identities = 42/168 (25%), Positives = 67/168 (39%), Gaps = 17/168 (10%)

Query: 40  YDGTSWKA--NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAA--WAALPAPR 95
           + G  W A    E I  ++P+T E +  V +    D    + ++R A+    W  L    
Sbjct: 2   FIGGRWVAPSGSETIDVVSPATEEVVGRVPEATPADVDAAVAAARRAFDNGPWPRLSPAE 61

Query: 96  RGEIVRQIGDALRHKLVPLGQLVSLEMGK-ILAEGIGEVQEFIDICDYAVGLSRTYSGSI 154
           R  ++R++ DAL  +   L +L + E G  I      +      +  Y   L+R +    
Sbjct: 62  RAAVLRRLADALEARADELARLWTAENGMPISWSRRAQGPGPAALLRYYAALARDFP--- 118

Query: 155 LPSERPG------HVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALV 196
               RPG       V  E   P+GVV  I  +N P+ +     A AL 
Sbjct: 119 FEERRPGSGGGHVLVRRE---PVGVVAAIVPWNAPLFLAALKIAPALA 163

The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. Length = 471

>gnl|CDD|236501 PRK09407, gabD2, succinic semialdehyde dehydrogenase; Reviewed

 Score = 73.4 bits (181), Expect = 4e-14
 Identities = 44/143 (30%), Positives = 61/143 (42%), Gaps = 16/143 (11%)

Query: 52  IPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKL 111
                P TGE +A+V      D       +RAA  AWAA P   R  ++ +  D +    
Sbjct: 34  REVTAPFTGEPLATVPVSTAADVEAAFARARAAQRAWAATPVRERAAVLLRFHDLVLENR 93

Query: 112 VPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTY---SGSIL-PSERPGHVLL-- 165
             L  LV LE GK       EV       D A+  +R Y   +  +L P  R G + +  
Sbjct: 94  EELLDLVQLETGKARRHAFEEV------LDVALT-ARYYARRAPKLLAPRRRAGALPVLT 146

Query: 166 ---ENWNPLGVVGIISAFNFPVA 185
              E   P GVVG+IS +N+P+ 
Sbjct: 147 KTTELRQPKGVVGVISPWNYPLT 169

Length = 524

>gnl|CDD|143456 cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like

 Score = 72.9 bits (180), Expect = 6e-14
 Identities = 43/140 (30%), Positives = 68/140 (48%), Gaps = 8/140 (5%)

Query: 47  ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDA 106
           A  E I  INP+T E I +V  G   D  R + ++R A+ AW+A     R  ++ +I +A
Sbjct: 11  AGTETIDVINPATEEVIGTVPLGTAADVDRAVAAARRAFPAWSATSVEERAALLERIAEA 70

Query: 107 LRHKLVPLGQLVSLEMG--KILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVL 164
              +   L Q ++LEMG    LA    +V   I     A    + +       ER G+ L
Sbjct: 71  YEARADELAQAITLEMGAPITLARAA-QVGLGIGHLRAAADALKDFEF----EERRGNSL 125

Query: 165 LENWNPLGVVGIISAFNFPV 184
           +    P+GV G+I+ +N+P+
Sbjct: 126 VV-REPIGVCGLITPWNWPL 144

The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. Length = 466

>gnl|CDD|143461 cd07143, ALDH_AldA_AN0554, Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like

 Score = 72.2 bits (177), Expect = 8e-14
 Identities = 41/120 (34%), Positives = 62/120 (51%), Gaps = 3/120 (2%)

Query: 261 GYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVT 320
           GYF+EPTI T +  + ++V  E F P+V V  F + +EAI   N+   GL++++FT ++ 
Sbjct: 364 GYFIEPTIFTDVTEDMKIVKEEIFGPVVAVIKFKTEEEAIKRANDSTYGLAAAVFTNNIN 423

Query: 321 NLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTIN 380
           N  +         G + VN   N       FGG K +G GRE G  + + Y +   V IN
Sbjct: 424 NAIR--VANALKAGTVWVNC-YNLLHHQVPFGGYKQSGIGRELGEYALENYTQIKAVHIN 480

NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. Length = 481

>gnl|CDD|215260 PLN02467, PLN02467, betaine aldehyde dehydrogenase

 Score = 72.1 bits (177), Expect = 9e-14
 Identities = 63/245 (25%), Positives = 93/245 (37%), Gaps = 92/245 (37%)

Query: 209 LELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRL---------FLHK----- 254
           LELGG + IIV +D DL+ A +  +F C  T GQ C+ T RL         FL K     
Sbjct: 259 LELGGKSPIIVFDDVDLDKAVEWAMFGCFWTNGQICSATSRLLVHERIASEFLEKLVKWA 318

Query: 255 ------------------------KKI------------------DRP-----GYFVEPT 267
                                   +K+                   RP     G+F+EPT
Sbjct: 319 KNIKISDPLEEGCRLGPVVSEGQYEKVLKFISTAKSEGATILCGGKRPEHLKKGFFIEPT 378

Query: 268 IVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKD------VTN 321
           I+T +  + ++   E F P++ V  F + DEAI   N+   GL+ ++ + D      V+ 
Sbjct: 379 IITDVTTSMQIWREEVFGPVLCVKTFSTEDEAIELANDSHYGLAGAVISNDLERCERVSE 438

Query: 322 LFKWLGPQGSDCGLINVN--------IPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCR 373
            F          G++ +N         P         +GG K +G GRE G    + Y  
Sbjct: 439 AF--------QAGIVWINCSQPCFCQAP---------WGGIKRSGFGRELGEWGLENYLS 481

Query: 374 RSTVT 378
              VT
Sbjct: 482 VKQVT 486

Length = 503

>gnl|CDD|143431 cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like

 Score = 71.7 bits (176), Expect = 1e-13
 Identities = 46/165 (27%), Positives = 66/165 (40%), Gaps = 10/165 (6%)

Query: 41  DGTSWKANGEIIPSI-NPSTGETIASVQQGNVQDYHRCIESSRAAY-AAWAALPAPRRGE 98
           DG       E    I NP+T + IASV      D    + S+  A+ +AWA      RG 
Sbjct: 5   DGRPVAGQSEKRLDITNPATEQVIASVASATEADVDAAVASAWRAFVSAWAKTTPAERGR 64

Query: 99  IVRQIGDALRHKLVPLGQLVSLEMGKI--LAEGIGEVQEFIDICDYAVGLSRTYSGSILP 156
           I+ ++ D +      L QL +L  GK   L+    EV +  +   Y  G +   +G  L 
Sbjct: 65  ILLRLADLIEQHGEELAQLETLCSGKSIHLSRAF-EVGQSANFLRYFAGWATKINGETLA 123

Query: 157 SERPG-----HVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALV 196
              P      +       P+GVV  I  +NF V +  W    AL 
Sbjct: 124 PSIPSMQGERYTAFTRREPVGVVAGIVPWNFSVMIAVWKIGAALA 168

NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. Length = 477

>gnl|CDD|143402 cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like

 Score = 71.8 bits (176), Expect = 1e-13
 Identities = 43/164 (26%), Positives = 70/164 (42%), Gaps = 3/164 (1%)

Query: 40  YDGTSWKANGEIIPSINPS-TGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGE 98
             G  W    E + S++P    E + +  + +  +    +E++ AA+  W   P   R  
Sbjct: 22  VIGGEWVDTKERMVSVSPFAPSEVVGTTAKADKAEAEAALEAAWAAFKTWKDWPQEDRAR 81

Query: 99  IVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDY-AVGLSRTYSGSILPS 157
           ++ +  D LR +   L   ++ E+GK   E I +V E ID   Y A    R    ++   
Sbjct: 82  LLLKAADLLRRRRRELIATLTYEVGKNWVEAIDDVAEAIDFIRYYARAALRLRYPAVEVV 141

Query: 158 ERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNA-AIALVGVAV 200
             PG      +  LG   +IS +NFPVA++     A   VG  V
Sbjct: 142 PYPGEDNESFYVGLGAGVVISPWNFPVAIFTGMIVAPVAVGNTV 185

ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. Length = 500

>gnl|CDD|143409 cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1

 Score = 71.6 bits (176), Expect = 2e-13
 Identities = 37/123 (30%), Positives = 66/123 (53%), Gaps = 5/123 (4%)

Query: 261 GYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVT 320
           G++V P ++T    +  +V  E F P++ + PFD+ +E I   N+   GL++ +FT+D+ 
Sbjct: 339 GFYVSPCVLTDCTDDMTIVREEIFGPVMSILPFDTEEEVIRRANDTTYGLAAGVFTRDLQ 398

Query: 321 NLFKWLGP-QGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTI 379
              + +   Q   C +   NI  +  E+   FGG K +G GRE+G+ + + Y +  TV +
Sbjct: 399 RAHRVIAQLQAGTCWINTYNI--SPVEV--PFGGYKQSGFGRENGTAALEHYTQLKTVYV 454

Query: 380 NHG 382
             G
Sbjct: 455 EMG 457

NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. Length = 457

>gnl|CDD|188167 TIGR01780, SSADH, succinate-semialdehyde dehydrogenase

 Score = 70.5 bits (173), Expect = 2e-13
 Identities = 45/143 (31%), Positives = 69/143 (48%), Gaps = 6/143 (4%)

Query: 56  NPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLG 115
           NP+TGE I SV    V +    I ++  A+  W A  A  R  ++R+  + +      L 
Sbjct: 3   NPATGEIIGSVPDQGVDETEAAIRAAYEAFKTWRATTAKERSSLLRKWYNLMMENKDDLA 62

Query: 116 QLVSLEMGKILAEGIGEVQ---EFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLG 172
           +L++LE GK L E  GE+     F++   +A    R Y G  +PS +    L+    P+G
Sbjct: 63  RLITLENGKPLKEAKGEILYAASFLEW--FAEEAKRVY-GDTIPSPQSDKRLIVIKQPVG 119

Query: 173 VVGIISAFNFPVAVYGWNAAIAL 195
           V   I+ +NFP A+    A  AL
Sbjct: 120 VCAAITPWNFPAAMITRKAGAAL 142

Succinic semialdehyde dehydrogenase is one of three enzymes constituting 4-aminobutyrate (GABA) degradation in both prokaryotes and eukaryotes, catalyzing the (NAD(P)+)-dependent catabolism reaction of succinic semialdehyde to succinate for metabolism by the citric acid cycle. The EC number depends on the cofactor: 1.2.1.24 for NAD only, 1.2.1.79 for NADP only, and 1.2.1.16 if both can be used. In Escherichia coli, succinic semialdehyde dehydrogenase is located in an unidirectionally transcribed gene cluster encoding enzymes for GABA degradation and is suggested to be cotranscribed with succinic semialdehyde transaminase from a common promoter upstream of SSADH. Similar gene arrangements can be found in characterized Ralstonia eutropha and the genome analysis of Bacillus subtilis. Prokaryotic succinic semialdehyde dehydrogenases (1.2.1.16) share high sequence homology to characterized succinic semialdehyde dehydrogenases from rat and human (1.2.1.24), exhibiting conservation of proposed cofactor binding residues, and putative active sites (G-237 & G-242, C-293 & G-259 respectively of rat SSADH). Eukaryotic SSADH enzymes exclusively utilize NAD+ as a cofactor, exhibiting little to no NADP+ activity. While a NADP+ preference has been detected in prokaryotes in addition to both NADP+- and NAD+-dependencies as in E.coli, Pseudomonas, and Klebsiella pneumoniae. The function of this alternative SSADH currently is unknown, but has been suggested to play a possible role in 4-hydroxyphenylacetic degradation. Just outside the scope of this model, are several sequences belonging to clades scoring between trusted and noise. These sequences may be actual SSADH enzymes, but lack sufficiently close characterized homologs to make a definitive assignment at this time. SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070) [Central intermediary metabolism, Other]. Length = 448

>gnl|CDD|143436 cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbosone dehydrogenase-like

 Score = 71.2 bits (175), Expect = 2e-13
 Identities = 38/122 (31%), Positives = 59/122 (48%), Gaps = 5/122 (4%)

Query: 259 RPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKD 318
             G F +PTI T +  +  +   E F P++ V  FD++DEAI   N+   GLS+ +++KD
Sbjct: 337 AAGLFYQPTIFTDVTPDMAIAREEIFGPVLSVLTFDTVDEAIALANDTVYGLSAGVWSKD 396

Query: 319 VTNLFKWLGPQGSDCGLINVN-IPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTV 377
           +         +    G + VN       E+   FGG K +G GRE G    ++Y    TV
Sbjct: 397 IDTAL--TVARRIRAGTVWVNTFLDGSPEL--PFGGFKQSGIGRELGRYGVEEYTELKTV 452

Query: 378 TI 379
            +
Sbjct: 453 HL 454

Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. Length = 454

>gnl|CDD|143457 cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like

 Score = 71.1 bits (175), Expect = 2e-13
 Identities = 37/110 (33%), Positives = 55/110 (50%), Gaps = 16/110 (14%)

Query: 261 GYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVT 320
           G+FVEPT+   + ++ R+   E F P++ V P+D  D+A+   N+   GLS S++T DV 
Sbjct: 357 GWFVEPTLFADVDNDMRIAQEEIFGPVLSVIPYDDEDDAVRIANDSDYGLSGSVWTADV- 415

Query: 321 NLFKWLGPQGSD------CGLINVNIPTNGAEIGGAFGGEKYTGGGRESG 364
                   +G         G + VN      + G  FGG K +G GRE G
Sbjct: 416 -------ERGLAVARRIRTGTVGVNGFR--LDFGAPFGGFKQSGIGREGG 456

The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. Length = 471

>gnl|CDD|215410 PLN02766, PLN02766, coniferyl-aldehyde dehydrogenase

 Score = 70.6 bits (173), Expect = 3e-13
 Identities = 101/477 (21%), Positives = 177/477 (37%), Gaps = 161/477 (33%)

Query: 47  ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAY--AAWAALPAPRRGEIVRQIG 104
           A+G+   + +P TGE IA + +G+ +D    ++++R A+    W  +    RG I+ +  
Sbjct: 33  ASGKTFETRDPRTGEVIARIAEGDKEDVDLAVKAAREAFDHGPWPRMSGFERGRIMMKFA 92

Query: 105 DALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYS-------GSILPS 157
           D +   +  L  L +++ GK+ A G     + +DI   A GL R Y+       G  L  
Sbjct: 93  DLIEEHIEELAALDTIDAGKLFALG-----KAVDIPA-AAGLLRYYAGAADKIHGETLKM 146

Query: 158 ERP--GHVLLEN---------WN------------------------------------- 169
            R   G+ L E          WN                                     
Sbjct: 147 SRQLQGYTLKEPIGVVGHIIPWNFPSTMFFMKVAPALAAGCTMVVKPAEQTPLSALFYAH 206

Query: 170 -------PLGVVGIISAFNFPVAVYGWNAAIA-------------------LVGVAVQSR 203
                  P GV+ +++ F  P A     AAIA                   ++  A  S 
Sbjct: 207 LAKLAGVPDGVINVVTGFG-PTA----GAAIASHMDVDKVSFTGSTEVGRKIMQAAATSN 261

Query: 204 FGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLH---------- 253
             ++ LELGG + +++ +DAD+++A    +       G+ C  + R+++           
Sbjct: 262 LKQVSLELGGKSPLLIFDDADVDMAVDLALLGIFYNKGEICVASSRVYVQEGIYDEFVKK 321

Query: 254 -------------------------KKKIDRPGYFVE------PTIVTG----------- 271
                                    K++ ++   ++E       T++TG           
Sbjct: 322 LVEKAKDWVVGDPFDPRARQGPQVDKQQFEKILSYIEHGKREGATLLTGGKPCGDKGYYI 381

Query: 272 -------LPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTK--DVTNL 322
                  +  + ++   E F P++ +  F +++EAI   N  K GL++ I TK  DV N 
Sbjct: 382 EPTIFTDVTEDMKIAQDEIFGPVMSLMKFKTVEEAIKKANNTKYGLAAGIVTKDLDVANT 441

Query: 323 FKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCR-RSTVT 378
                 +    G I VN      +    FGG K +G GR+ G D+  +Y + +S VT
Sbjct: 442 VS----RSIRAGTIWVNC-YFAFDPDCPFGGYKMSGFGRDQGMDALDKYLQVKSVVT 493

Length = 501

>gnl|CDD|215260 PLN02467, PLN02467, betaine aldehyde dehydrogenase

 Score = 70.1 bits (172), Expect = 4e-13
 Identities = 48/171 (28%), Positives = 81/171 (47%), Gaps = 16/171 (9%)

Query: 38  GVYDGTSWKA--NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAA-----WAA 90
            ++ G  W+    G+ IP +NP+T ETI  +     +D    +E++R A+       WA 
Sbjct: 9   QLFIGGEWREPVLGKRIPVVNPATEETIGDIPAATAEDVDAAVEAARKAFKRNKGKDWAR 68

Query: 91  LPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGL---- 146
                R + +R I   +  +   L +L +L+ GK L E   ++ +     +Y   L    
Sbjct: 69  TTGAVRAKYLRAIAAKITERKSELAKLETLDCGKPLDEAAWDMDDVAGCFEYYADLAEAL 128

Query: 147 -SRTYSGSILPSER-PGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL 195
            ++  +   LP E   G+VL     PLGVVG+I+ +N+P+ +  W  A AL
Sbjct: 129 DAKQKAPVSLPMETFKGYVL---KEPLGVVGLITPWNYPLLMATWKVAPAL 176

Length = 503

>gnl|CDD|233325 TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain)

 Score = 70.3 bits (172), Expect = 4e-13
 Identities = 46/156 (29%), Positives = 67/156 (42%), Gaps = 13/156 (8%)

Query: 42  GTSWKANGEIIPSINPSTGETI-ASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIV 100
           G S+KA+GE  P  NP+    I   V   N+      I+S++ A+  W A PA  R   +
Sbjct: 43  GHSYKADGEAQPVTNPADRRDIVGQVFHANLAHVQAAIDSAQQAFPTWNATPAKERAAKL 102

Query: 101 RQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERP 160
            ++ D L   +  L  L   E GK +   I EV+E +D C Y     R     +L     
Sbjct: 103 DRLADLLELHMPELMALCVREAGKTIHNAIAEVREAVDFCRYYAKQVR----DVLGEFSV 158

Query: 161 GHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALV 196
                      GV   IS +NFP+A++    + AL 
Sbjct: 159 --------ESRGVFVCISPWNFPLAIFTGQISAALA 186

This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase [Energy metabolism, Amino acids and amines]. Length = 500

>gnl|CDD|143429 cd07111, ALDH_F16, Aldehyde dehydrogenase family 16A1-like

 Score = 70.1 bits (172), Expect = 4e-13
 Identities = 47/151 (31%), Positives = 73/151 (48%), Gaps = 14/151 (9%)

Query: 47  ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDA 106
            N +  P+INP+TGE +ASV Q   +D    + ++R A+ +W+ALP   R   + +I   
Sbjct: 34  ENRKSFPTINPATGEVLASVLQAEEEDVDAAVAAARTAFESWSALPGHVRARHLYRIARH 93

Query: 107 LRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSG--SILPSERPGHVL 164
           ++        L SL+ GK     I E ++  DI          ++G   +L +E  G   
Sbjct: 94  IQKHQRLFAVLESLDNGK----PIRESRD-CDI-PLVARHFYHHAGWAQLLDTELAG--- 144

Query: 165 LENWNPLGVVGIISAFNFPVAVYGWNAAIAL 195
              W P+GVVG I  +NFP+ +  W    AL
Sbjct: 145 ---WKPVGVVGQIVPWNFPLLMLAWKICPAL 172

Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. Length = 480

>gnl|CDD|215157 PLN02278, PLN02278, succinic semialdehyde dehydrogenase

 Score = 69.7 bits (171), Expect = 6e-13
 Identities = 53/228 (23%), Positives = 84/228 (36%), Gaps = 68/228 (29%)

Query: 206 KLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKKKID------- 258
           ++ LELGGN   IV +DADL++A +  + +    +GQ C    R+ + +   D       
Sbjct: 265 RVSLELGGNAPFIVFDDADLDVAVKGALASKFRNSGQTCVCANRILVQEGIYDKFAEAFS 324

Query: 259 ------------RPGYFVEPTI-----------------------VTGLPHN-------- 275
                         G    P I                       + G  H+        
Sbjct: 325 KAVQKLVVGDGFEEGVTQGPLINEAAVQKVESHVQDAVSKGAKVLLGGKRHSLGGTFYEP 384

Query: 276 ---------SRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWL 326
                      +   E F P+  +  F + +EAI   N+ + GL++ IFT+D+     W 
Sbjct: 385 TVLGDVTEDMLIFREEVFGPVAPLTRFKTEEEAIAIANDTEAGLAAYIFTRDLQRA--WR 442

Query: 327 GPQGSDCGLINVN---IPTNGAEIGGAFGGEKYTGGGRESGSDSWKQY 371
             +  + G++ VN   I T  A     FGG K +G GRE       +Y
Sbjct: 443 VSEALEYGIVGVNEGLISTEVA----PFGGVKQSGLGREGSKYGIDEY 486

Length = 498

>gnl|CDD|143418 cd07100, ALDH_SSADH1_GabD1, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like

 Score = 69.0 bits (170), Expect = 8e-13
 Identities = 36/111 (32%), Positives = 54/111 (48%), Gaps = 11/111 (9%)

Query: 78  IESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFI 137
           ++ + AA+ AW       R  ++R++ D LR +   L +L++LEMGK +AE   EV++  
Sbjct: 5   LDRAHAAFLAWRKTSFAERAALLRKLADLLRERKDELARLITLEMGKPIAEARAEVEKCA 64

Query: 138 DICDY-----AVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFP 183
            IC Y        L+      I       +V  E   PLGVV  I  +NFP
Sbjct: 65  WICRYYAENAEAFLADEP---IETDAGKAYVRYE---PLGVVLGIMPWNFP 109

Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. Length = 429

>gnl|CDD|143470 cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde dehydrogenase II-like

 Score = 69.2 bits (170), Expect = 8e-13
 Identities = 36/120 (30%), Positives = 60/120 (50%), Gaps = 3/120 (2%)

Query: 261 GYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVT 320
           G F  PT+++G+         E F P+  V  FDS +EA+   N+ + GLS+ I ++DV 
Sbjct: 326 GLFYRPTVLSGVKPGMPAFDEEIFGPVAPVTVFDSDEEAVALANDTEYGLSAGIISRDVG 385

Query: 321 NLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTG-GGRESGSDSWKQYCRRSTVTI 379
                L  +    G++++N  T   E    FGG   +G G R  G  +W+++ +   VT+
Sbjct: 386 RAMA-LADR-LRTGMLHINDQTVNDEPHNPFGGMGASGNGSRFGGPANWEEFTQWQWVTV 443

NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. Length = 443

>gnl|CDD|132294 TIGR03250, PhnAcAld_DH, putative phosphonoacetaldehyde dehydrogenase

 Score = 69.5 bits (170), Expect = 8e-13
 Identities = 66/282 (23%), Positives = 100/282 (35%), Gaps = 78/282 (27%)

Query: 56  NPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLG 115
            P  G  + +V + +V D  R       A A    L    R  I+ +    L  +   + 
Sbjct: 23  YPYNGTVVGTVPKASVDDVRRAF---AIAAAYRPTLTRYERSAILDRAAALLAARKEEIS 79

Query: 116 QLVSLEMGKILAEGIGEVQEFIDICDYAVGLS-----RTYSGSILPSERPGHVLLENWNP 170
            L++LE G    + + EV    D+  +A   +     + +S  + P  +   V  +    
Sbjct: 80  DLITLESGLSKKDSLYEVGRVADVLTFAAAEALRDDGQIFSCDLTPHGKARKVFTQREPL 139

Query: 171 LGVVGIISAFNFP---VA------------------------------------------ 185
           LGV+  I+ FN P   VA                                          
Sbjct: 140 LGVISAITPFNHPMNQVAHKIAPAIATNNRMVVKPSEKTPLSALYLADILYEAGLPPQML 199

Query: 186 --VYGWNAAIA----------LV----GVAVQSR------FGKLLLELGGNNAIIVNEDA 223
             V G    IA          LV    GVA+         + + +LELGGN+ +IV EDA
Sbjct: 200 QVVTGDPREIADELITNPHVDLVTFTGGVAIGKYIAARAGYRRQVLELGGNDPLIVMEDA 259

Query: 224 DLNLAQQCLVFACCGTAGQRCTTTRRLFLHKKKIDRPGYFVE 265
           DL+ A    V      +GQRCT  +R+ + +   DR   F E
Sbjct: 260 DLDRAADLAVKGSYKNSGQRCTAVKRMLVQESVADR---FTE 298

This family of genes are members of the pfam00171 NAD-dependent aldehyde dehydrogenase family. These genes are observed in Ralstonia eutropha JMP134, Sinorhizobium meliloti 1021, Burkholderia mallei ATCC 23344, Burkholderia thailandensis E264, Burkholderia cenocepacia AU 1054, Burkholderia pseudomallei K96243 and 1710b, Burkholderia xenovorans LB400, Burkholderia sp. 383 and Polaromonas sp. JS666 in close proximity to the PhnW gene (TIGR02326) encoding 2-aminoethyl phosphonate aminotransferase (which generates phosphonoacetaldehyde) and PhnA (TIGR02335) encoding phosphonoacetate hydrolase (not to be confused with the alkylphosphonate utilization operon protein PhnA modeled by TIGR00686). Additionally, transporters believed to be specific for 2-aminoethyl phosphonate are often present. PhnW is, in other organisms, coupled with PhnX (TIGR01422) for the degradation of phosphonoacetaldehyde (GenProp0238), but PhnX is apparently absent in each of the organisms containing this aldehyde reductase. PhnA, characterized in a strain of Pseudomonas fluorescens that has not het been genome sequenced, is only rarely found outside of the PhnW and aldehyde dehydrogenase context. For instance in Rhodopseudomonas and Bordetella bronchiseptica, where it is adjacent to transporters presumably specific for the import of phosphonoacetate. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. Length = 472

>gnl|CDD|143463 cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like

 Score = 68.9 bits (169), Expect = 9e-13
 Identities = 28/113 (24%), Positives = 44/113 (38%), Gaps = 20/113 (17%)

Query: 260 PGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDV 319
            G F  PT++     +  V+  E F P++ +      +EA+   N  + GL +S+FT D+
Sbjct: 339 EGSFFPPTVLENDTPDMIVMKEEVFGPVLPIAKVKDDEEAVEIANSTEYGLQASVFTNDI 398

Query: 320 TNLFKWLGPQGSDCGLINVNIPTNGAEIGG---------AFGGEKYTGGGRES 363
               K           +   +   G  I            FGG K +G GRE 
Sbjct: 399 NRALK-----------VARELEAGGVVINDSTRFRWDNLPFGGFKKSGIGREG 440

NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. Length = 456

>gnl|CDD|182233 PRK10090, PRK10090, aldehyde dehydrogenase A; Provisional

 Score = 69.0 bits (169), Expect = 9e-13
 Identities = 25/70 (35%), Positives = 43/70 (61%)

Query: 255 KKIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSI 314
           K ++  GY+  PT++  +     ++H ETF P++ V  FD+L+EAI   N+   GL+SSI
Sbjct: 285 KAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEEAIAMANDSDYGLTSSI 344

Query: 315 FTKDVTNLFK 324
           +T+++    K
Sbjct: 345 YTQNLNVAMK 354

Length = 409

>gnl|CDD|179543 PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehydrogenase; Provisional

 Score = 69.2 bits (170), Expect = 9e-13
 Identities = 36/148 (24%), Positives = 60/148 (40%), Gaps = 1/148 (0%)

Query: 50  EIIPSINPS-TGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALR 108
           + I SINP+   E +  V +   +   + ++++  A+  W       R  I+ +    +R
Sbjct: 50  DKIVSINPANKSEVVGRVSKATKELAEKAMQAALEAFETWKKWSPEDRARILLRAAAIIR 109

Query: 109 HKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENW 168
            +       +  E GK  AE   +  E ID  +Y        +       RPG      +
Sbjct: 110 RRKHEFSAWLVKEAGKPWAEADADTAEAIDFLEYYARQMLKLADGKPVESRPGEHNRYFY 169

Query: 169 NPLGVVGIISAFNFPVAVYGWNAAIALV 196
            PLGV  +IS +NFP A+       A+V
Sbjct: 170 IPLGVGVVISPWNFPFAIMAGMTLAAIV 197

Length = 514

>gnl|CDD|143419 cd07101, ALDH_SSADH2_GabD2, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like

 Score = 68.5 bits (168), Expect = 1e-12
 Identities = 37/120 (30%), Positives = 60/120 (50%), Gaps = 6/120 (5%)

Query: 262 YFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTN 321
           YF EPT++TG+  +  +   ETF P+V ++     DEAI   N+   GL++S++T+D   
Sbjct: 337 YFYEPTVLTGVTEDMELFAEETFGPVVSIYRVADDDEAIELANDTDYGLNASVWTRDGAR 396

Query: 322 LFKWLGPQGSDCGLINVN---IPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVT 378
             + +  +    G +NVN        + I    GG K +G GR  G++   +Y    TV 
Sbjct: 397 GRR-IAAR-LRAGTVNVNEGYAAAWAS-IDAPMGGMKDSGLGRRHGAEGLLKYTETQTVA 453

Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). Length = 454

>gnl|CDD|143425 cd07107, ALDH_PhdK-like, Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like

 Score = 67.8 bits (166), Expect = 2e-12
 Identities = 31/120 (25%), Positives = 58/120 (48%), Gaps = 3/120 (2%)

Query: 261 GYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVT 320
           G++VEPT+   +    R+   E F P++ V  +    E +   N V+ GL+++I+T D++
Sbjct: 339 GFYVEPTVFADVTPGMRIAREEIFGPVLSVLRWRDEAEMVAQANGVEYGLTAAIWTNDIS 398

Query: 321 NLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTIN 380
                   +  + G + +N  ++   +G  FGG K +G GRE   +    Y +   V + 
Sbjct: 399 QAH--RTARRVEAGYVWIN-GSSRHFLGAPFGGVKNSGIGREECLEELLSYTQEKNVNVR 455

Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. Length = 456

>gnl|CDD|143430 cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like

 Score = 68.0 bits (167), Expect = 2e-12
 Identities = 44/151 (29%), Positives = 75/151 (49%), Gaps = 6/151 (3%)

Query: 49  GEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAY--AAWAALPAPRRGEIVRQIGDA 106
           GE   +INP+TG  +A V   +  D  R + ++R A+    W+ L    R  ++ ++ D 
Sbjct: 1   GETFATINPATGRVLAEVAACDAADVDRAVAAARRAFESGVWSRLSPAERKAVLLRLADL 60

Query: 107 LRHKLVPLGQLVSLEMGKILAEGI-GEVQEFIDICD-YAVGLSRTYSGSILPSERPGHVL 164
           +      L  L +L+MGK +++ +  +V    +    YA  + + Y G + P+  P  + 
Sbjct: 61  IEAHRDELALLETLDMGKPISDALAVDVPSAANTFRWYAEAIDKVY-GEVAPTG-PDALA 118

Query: 165 LENWNPLGVVGIISAFNFPVAVYGWNAAIAL 195
           L    PLGVVG +  +NFP+ +  W  A AL
Sbjct: 119 LITREPLGVVGAVVPWNFPLLMAAWKIAPAL 149

NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. Length = 462

>gnl|CDD|236501 PRK09407, gabD2, succinic semialdehyde dehydrogenase; Reviewed

 Score = 68.4 bits (168), Expect = 2e-12
 Identities = 36/120 (30%), Positives = 60/120 (50%), Gaps = 6/120 (5%)

Query: 262 YFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTN 321
            F EPT++TG+  +  +   ETF P+V V+P   +DEA+   N+   GL++S++T D   
Sbjct: 373 LFYEPTVLTGVTPDMELAREETFGPVVSVYPVADVDEAVERANDTPYGLNASVWTGDTAR 432

Query: 322 LFKWLGPQGSDCGLINVN---IPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVT 378
               +  +    G +NVN       G+ +    GG K +G GR  G++   +Y    T+ 
Sbjct: 433 GRA-IAAR-IRAGTVNVNEGYAAAWGS-VDAPMGGMKDSGLGRRHGAEGLLKYTESQTIA 489

Length = 524

>gnl|CDD|212007 TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, Rv0768 family

 Score = 68.3 bits (167), Expect = 2e-12
 Identities = 42/122 (34%), Positives = 59/122 (48%), Gaps = 18/122 (14%)

Query: 258 DRP-GYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFT 316
           DR  G+FVEPT++ GL +N+RV   E F P++ V   D  D+A+   N+   GLS ++F 
Sbjct: 359 DRDRGFFVEPTVIAGLDNNARVAREEIFGPVLTVIAHDGDDDAVRIANDSPYGLSGTVFG 418

Query: 317 KDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGA-------FGGEKYTGGGRESGSDSWK 369
            D               G +NVN        GG        FGG K +G GRE G   ++
Sbjct: 419 ADPERAAAVA--ARVRTGTVNVN--------GGVWYSADAPFGGYKQSGIGREMGVAGFE 468

Query: 370 QY 371
           +Y
Sbjct: 469 EY 470

This family describes a branch of the aldehyde dehydrogenase (NAD) family (see pfam00171) that includes Rv0768 from Mycobacterium tuberculosis. All members of this family belong to species predicted to synthesize mycofactocin, suggesting that this enzyme or another upstream or downstream in the same pathway might be mycofactocin-dependent. However, the taxonomic range of this family is not nearly broad enough to make that relationship conclusive [Unknown function, Enzymes of unknown specificity]. Length = 480

>gnl|CDD|215110 PLN00412, PLN00412, NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional

 Score = 67.9 bits (166), Expect = 2e-12
 Identities = 51/179 (28%), Positives = 87/179 (48%), Gaps = 19/179 (10%)

Query: 35  VNPGVY----DGTSWK--ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAW 88
           ++  VY    DG  W+  ++G+ +   NPST +T   VQ    ++ ++ +ES++AA  AW
Sbjct: 11  LDGDVYKYYADGE-WRTSSSGKSVAITNPSTRKTQYKVQACTQEEVNKAMESAKAAQKAW 69

Query: 89  AALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAV--GL 146
           A  P  +R E++ +    L+    P+ + +  E+ K   + + EV    D+  Y    G+
Sbjct: 70  AKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVVRSGDLISYTAEEGV 129

Query: 147 SRTYSGSILPSER-PGH----VLLENWNPLGVVGIISAFNFPVAVYGWNAAIALVGVAV 200
                G  L S+  PG+      L +  PLGVV  I  FN+PV     N A++ +  A+
Sbjct: 130 RILGEGKFLVSDSFPGNERNKYCLTSKIPLGVVLAIPPFNYPV-----NLAVSKIAPAL 183

Length = 496

>gnl|CDD|143471 cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like

 Score = 67.8 bits (166), Expect = 3e-12
 Identities = 42/163 (25%), Positives = 71/163 (43%), Gaps = 8/163 (4%)

Query: 38  GVYDGTSWKA--NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPR 95
             +    W A   GE   + NP  G+ +  + +   +D    ++++  A+  W       
Sbjct: 2   DNFINGEWVAPSKGEYFDNYNPVNGKVLCEIPRSTAEDVDLAVDAAHEAFKTWGKTSVAE 61

Query: 96  RGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIG-EVQEFIDICDYAVGLSRTYSGSI 154
           R  I+ +I D +   L  L    +L+ GK + E +  ++   ID   Y  G+ R   GS+
Sbjct: 62  RANILNKIADRIEENLELLAVAETLDNGKPIRETLAADIPLAIDHFRYFAGVIRAQEGSL 121

Query: 155 --LPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL 195
             +  +   +   E   PLGVVG I  +NFP+ +  W  A AL
Sbjct: 122 SEIDEDTLSYHFHE---PLGVVGQIIPWNFPLLMAAWKLAPAL 161

Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. Length = 480

>gnl|CDD|132284 TIGR03240, arg_catab_astD, succinylglutamic semialdehyde dehydrogenase

 Score = 67.8 bits (166), Expect = 3e-12
 Identities = 41/143 (28%), Positives = 64/143 (44%), Gaps = 8/143 (5%)

Query: 45  WKA-NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQI 103
           W+A  GE   S NP+T E +      +       + ++RAA+ AWA L    R  +V++ 
Sbjct: 7   WRAGQGESFSSTNPATQEVLWQGAAASAAQVEAAVAAARAAFPAWARLSLEERIAVVQRF 66

Query: 104 GDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERP--- 160
              L  +   L ++++ E GK L E   EV   I     ++      +G    SE P   
Sbjct: 67  AALLEERKEALARVIARETGKPLWETRTEVASMIGKVAISIKAYHERTGE---SENPMPD 123

Query: 161 GHVLLENWNPLGVVGIISAFNFP 183
           G  +L +  P GVV +   +NFP
Sbjct: 124 GRAVLRH-RPHGVVAVFGPYNFP 145

Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism [Energy metabolism, Amino acids and amines]. Length = 484

>gnl|CDD|181826 PRK09406, gabD1, succinic semialdehyde dehydrogenase; Reviewed

 Score = 67.5 bits (165), Expect = 3e-12
 Identities = 37/126 (29%), Positives = 65/126 (51%), Gaps = 5/126 (3%)

Query: 255 KKIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSI 314
           K+ D PG+F  PT++T +  + R+   E F P+  ++    +DEAI   N    GL S+ 
Sbjct: 335 KRPDGPGWFYPPTVITDITPDMRLYTEEVFGPVASLYRVADIDEAIEIANATTFGLGSNA 394

Query: 315 FTKDVTNLFKWLGPQGSDCGLINVN-IPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCR 373
           +T+D     +++     + G + +N +  +  E+   FGG K +G GRE  +   +++C 
Sbjct: 395 WTRDEAEQERFI--DDLEAGQVFINGMTVSYPELP--FGGVKRSGYGRELSAHGIREFCN 450

Query: 374 RSTVTI 379
             TV I
Sbjct: 451 IKTVWI 456

Length = 457

>gnl|CDD|143435 cd07117, ALDH_StaphAldA1, Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like

 Score = 67.5 bits (165), Expect = 3e-12
 Identities = 35/103 (33%), Positives = 54/103 (52%), Gaps = 3/103 (2%)

Query: 261 GYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVT 320
           G+F+EPT++  + ++ RV   E F P+  V  F + DE I   N+ + GL   +FTKD+ 
Sbjct: 358 GFFIEPTLIVNVTNDMRVAQEEIFGPVATVIKFKTEDEVIDMANDSEYGLGGGVFTKDIN 417

Query: 321 NLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRES 363
              +    +  + G + VN   N    G  FGG K +G GRE+
Sbjct: 418 RALRV--ARAVETGRVWVNT-YNQIPAGAPFGGYKKSGIGRET 457

Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. Length = 475

>gnl|CDD|181873 PRK09457, astD, succinylglutamic semialdehyde dehydrogenase; Reviewed

 Score = 67.3 bits (165), Expect = 3e-12
 Identities = 41/146 (28%), Positives = 58/146 (39%), Gaps = 14/146 (9%)

Query: 45  WKA-NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQI 103
           W A  GE   S NP +GE +              + ++RAA+ AWA L    R  IV + 
Sbjct: 9   WIAGQGEAFESRNPVSGEVLWQGNDATAAQVDAAVRAARAAFPAWARLSFEERQAIVERF 68

Query: 104 GDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLS------RTYSGSILPS 157
              L      L ++++ E GK L E   EV   I+     + +S      RT       S
Sbjct: 69  AALLEENKEELAEVIARETGKPLWEAATEVTAMIN----KIAISIQAYHERTGEKR---S 121

Query: 158 ERPGHVLLENWNPLGVVGIISAFNFP 183
           E      +    P GVV +   +NFP
Sbjct: 122 EMADGAAVLRHRPHGVVAVFGPYNFP 147

Length = 487

>gnl|CDD|143423 cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogenase, DoxF-like

 Score = 66.8 bits (164), Expect = 4e-12
 Identities = 30/119 (25%), Positives = 58/119 (48%), Gaps = 2/119 (1%)

Query: 261 GYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVT 320
           G  + PTI+  +  +  +   E+F P+V +      +EA+   N+ + GLS+++FT+D+ 
Sbjct: 316 GTSMPPTILDNVTPDMDIYSEESFGPVVSIIRVKDEEEAVRIANDSEYGLSAAVFTRDLA 375

Query: 321 NLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTI 379
                +  +  + G +++N  T   E     GG K +G GR +G     ++     +TI
Sbjct: 376 RALA-VAKR-IESGAVHINGMTVHDEPTLPHGGVKSSGYGRFNGKWGIDEFTETKWITI 432

Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. Length = 432

>gnl|CDD|143408 cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins

 Score = 66.9 bits (164), Expect = 5e-12
 Identities = 37/147 (25%), Positives = 58/147 (39%), Gaps = 6/147 (4%)

Query: 55  INPSTGETIASVQQGNVQDYHRCIESSRAAYAAWA-ALPAPRRGEIVRQIGDALRHKLVP 113
           INP+T E I +       D    I ++R A+     +  A  R   +RQ+ +AL  +   
Sbjct: 2   INPATEEVIGTAPDAGAADVDAAIAAARRAFDTGDWSTDAEERARCLRQLHEALEARKEE 61

Query: 114 LGQLVSLEMGKILA-EGIGEVQEFIDICDYAVGLSRTYSGSI-LPSERPGHVLLENW--- 168
           L  L+  E+G  +      +V   I    Y   L+ ++     LP               
Sbjct: 62  LRALLVAEVGAPVMTARAMQVDGPIGHLRYFADLADSFPWEFDLPVPALRGGPGRRVVRR 121

Query: 169 NPLGVVGIISAFNFPVAVYGWNAAIAL 195
            P+GVV  I+ +NFP  +     A AL
Sbjct: 122 EPVGVVAAITPWNFPFFLNLAKLAPAL 148

The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. Length = 459

>gnl|CDD|143471 cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like

 Score = 66.2 bits (162), Expect = 7e-12
 Identities = 34/106 (32%), Positives = 52/106 (49%), Gaps = 11/106 (10%)

Query: 261 GYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVT 320
           GYF EPT++ G  ++ R+   E F P++ V  F   +EAI   N+ + GL   ++T+D+ 
Sbjct: 363 GYFYEPTLIKGGNNDMRIFQEEIFGPVLAVITFKDEEEAIAIANDTEYGLGGGVWTRDIN 422

Query: 321 NLFKWLGPQGSDCGLINVN----IPTNGAEIGGAFGGEKYTGGGRE 362
              +    +G   G + VN     P         FGG K +G GRE
Sbjct: 423 RALRV--ARGIQTGRVWVNCYHQYPA-----HAPFGGYKKSGIGRE 461

Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. Length = 480

>gnl|CDD|143435 cd07117, ALDH_StaphAldA1, Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like

 Score = 65.9 bits (161), Expect = 8e-12
 Identities = 43/155 (27%), Positives = 72/155 (46%), Gaps = 12/155 (7%)

Query: 47  ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDA 106
           ++GE I S NP+ GET++ +      D  R +++++ A+  W       R  I+ +I D 
Sbjct: 13  SSGETIDSYNPANGETLSEITDATDADVDRAVKAAQEAFKTWRKTTVAERANILNKIADI 72

Query: 107 LRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLE 166
           +      L  + +L+ GK + E        +DI   A    R ++G I   E   +++ E
Sbjct: 73  IDENKELLAMVETLDNGKPIRETRA-----VDI-PLAADHFRYFAGVIRAEEGSANMIDE 126

Query: 167 NW------NPLGVVGIISAFNFPVAVYGWNAAIAL 195
           +        P+GVVG I  +NFP  +  W  A AL
Sbjct: 127 DTLSIVLREPIGVVGQIIPWNFPFLMAAWKLAPAL 161

Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. Length = 475

>gnl|CDD|143415 cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like

 Score = 65.7 bits (161), Expect = 1e-11
 Identities = 28/70 (40%), Positives = 42/70 (60%), Gaps = 3/70 (4%)

Query: 196 VGVAVQSRFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK 255
           +  A  +R  ++ LE+GG N ++V +DADL+LA +C V     + GQRCT + RL + + 
Sbjct: 230 IAAAAAARGARVQLEMGGKNPLVVLDDADLDLAVECAVQGAFFSTGQRCTASSRLIVTEG 289

Query: 256 KIDRPGYFVE 265
             DR   FVE
Sbjct: 290 IHDR---FVE 296

Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. Length = 473

>gnl|CDD|200131 TIGR01804, BADH, glycine betaine aldehyde dehydrogenase

 Score = 65.6 bits (160), Expect = 1e-11
 Identities = 57/229 (24%), Positives = 84/229 (36%), Gaps = 66/229 (28%)

Query: 206 KLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTT------------------- 246
            + +ELGG + +IV +DADL  A    +     +AGQ C+                    
Sbjct: 238 HVTMELGGKSPLIVFDDADLESAVDGAMLGNFFSAGQVCSNGTRVFVHKKIKERFLARLV 297

Query: 247 --TRRLFL-----------------HKKKI------------------DRP-------GY 262
             T R+ L                 H+ K+                   RP       G+
Sbjct: 298 ERTERIKLGDPFDEATEMGPLISAAHRDKVLSYIEKGKAEGATLATGGGRPENVGLQNGF 357

Query: 263 FVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNL 322
           FVEPT+      +  +V  E F P++ V  F   DE I   N+ + GL+  +FT D+   
Sbjct: 358 FVEPTVFADCTDDMTIVREEIFGPVMTVLTFSDEDEVIARANDTEYGLAGGVFTADLGRA 417

Query: 323 FKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQY 371
            +      +    IN       AE    FGG K +G GRE+G  +   Y
Sbjct: 418 HRVADQLEAGTVWINTYNLYP-AEA--PFGGYKQSGIGRENGKAALAHY 463

Under osmotic stress, betaine aldehyde dehydrogenase oxidizes glycine betaine aldehyde into the osmoprotectant glycine betaine, via the second of two oxidation steps from exogenously supplied choline or betaine aldehyde. This choline-glycine betaine synthesis pathway can be found in gram-positive and gram-negative bacteria. In Escherichia coli, betaine aldehyde dehydrogenase (betB) is osmotically co-induced with choline dehydrogenase (betA) in the presence of choline. These dehydrogenases are located in a betaine gene cluster with the upstream choline transporter (betT) and transcriptional regulator (betI). Similar to E.coli, betaine synthesis in Staphylococcus xylosus is also influenced by osmotic stress and the presence of choline with genes localized in a functionally equivalent gene cluster. Organization of the betaine gene cluster in Sinorhizobium meliloti and Bacillus subtilis differs from that of E.coli by the absence of upstream choline transporter and transcriptional regulator homologues. Additionally, B.subtilis co-expresses a type II alcohol dehydrogenase with betaine aldehyde dehydrogenase instead of choline dehydrogenase as in E.coli, St.xylosus, and Si.meliloti. Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171) [Cellular processes, Adaptations to atypical conditions]. Length = 467

>gnl|CDD|143429 cd07111, ALDH_F16, Aldehyde dehydrogenase family 16A1-like

 Score = 65.9 bits (161), Expect = 1e-11
 Identities = 33/115 (28%), Positives = 59/115 (51%), Gaps = 3/115 (2%)

Query: 261 GYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVT 320
           G F  PT+ T +P  SR+   E F P++ V  F +  EA+   N    GL++S+++++++
Sbjct: 365 GPFYPPTLFTNVPPASRIAQEEIFGPVLVVLTFRTAKEAVALANNTPYGLAASVWSENLS 424

Query: 321 NLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRS 375
              + +       G++ +N   N  +    FGG + +G GRE G +   +Y R S
Sbjct: 425 LALE-VALS-LKAGVVWIN-GHNLFDAAAGFGGYRESGFGREGGKEGLYEYLRPS 476

Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. Length = 480

>gnl|CDD|143449 cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like

 Score = 65.1 bits (159), Expect = 2e-11
 Identities = 26/51 (50%), Positives = 35/51 (68%)

Query: 209 LELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKKKIDR 259
           LE+GG N IIV +DADL+LA +  +++  GT GQRCT T RL +H+   D 
Sbjct: 243 LEMGGKNPIIVMDDADLDLALEGALWSAFGTTGQRCTATSRLIVHESVYDE 293

Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. Length = 478

>gnl|CDD|143420 cd07102, ALDH_EDX86601, Uncharacterized aldehyde dehydrogenase of Synechococcus sp

 Score = 64.6 bits (158), Expect = 2e-11
 Identities = 43/150 (28%), Positives = 71/150 (47%), Gaps = 7/150 (4%)

Query: 55  INPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPL 114
           I+P  G  IA     +++     +E +RAA   W A+P   R  IV +  + L      +
Sbjct: 1   ISPIDGSVIAERPLASLEAVRAALERARAAQKGWRAVPLEERKAIVTRAVELLAANTDEI 60

Query: 115 GQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVV 174
            + ++ +MG+ +A+  GE++  ++   Y + ++      I   E+ G        PLGVV
Sbjct: 61  AEELTWQMGRPIAQAGGEIRGMLERARYMISIAEEALADIRVPEKDGFERYIRREPLGVV 120

Query: 175 GIISAFNFP--VAVYGWNAAIA--LVGVAV 200
            II+ +N+P   AV   NA I   L G AV
Sbjct: 121 LIIAPWNYPYLTAV---NAVIPALLAGNAV 147

PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. Length = 452

>gnl|CDD|166060 PLN02419, PLN02419, methylmalonate-semialdehyde dehydrogenase [acylating]

 Score = 64.8 bits (157), Expect = 2e-11
 Identities = 35/148 (23%), Positives = 69/148 (46%)

Query: 48  NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDAL 107
           +   I  INP+T E ++ V     +++   + +++ A+  W   P   R  ++ +  + +
Sbjct: 127 SSSFIDVINPATQEVVSKVPLTTNEEFKAAVSAAKQAFPLWRNTPITTRQRVMLKFQELI 186

Query: 108 RHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLEN 167
           R  +  L   ++ E GK L +  G++   +++ ++A G++    G  LP+   G      
Sbjct: 187 RKNMDKLAMNITTEQGKTLKDSHGDIFRGLEVVEHACGMATLQMGEYLPNVSNGVDTYSI 246

Query: 168 WNPLGVVGIISAFNFPVAVYGWNAAIAL 195
             PLGV   I  FNFP  +  W   +A+
Sbjct: 247 REPLGVCAGICPFNFPAMIPLWMFPVAV 274

Length = 604

>gnl|CDD|143416 cd07098, ALDH_F15-22, Aldehyde dehydrogenase family 15A1 and 22A1-like

 Score = 64.6 bits (158), Expect = 3e-11
 Identities = 31/125 (24%), Positives = 58/125 (46%), Gaps = 15/125 (12%)

Query: 261 GYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVT 320
           G++  PT++  +  + ++   E F P++ V      +EA+   N  + GL +S+F KD+ 
Sbjct: 346 GHYFPPTLLVDVTPDMKIAQEEVFGPVMVVMKASDDEEAVEIANSTEYGLGASVFGKDIK 405

Query: 321 NLFKWLGPQGSDCGLINVNIPTNGAEIGGA-------FGGEKYTGGGRESGSDSWKQYCR 373
              + +  Q    G++ +N      + G         FGG K +G GR +G +  +  C 
Sbjct: 406 RA-RRIASQLE-TGMVAIN------DFGVNYYVQQLPFGGVKGSGFGRFAGEEGLRGLCN 457

Query: 374 RSTVT 378
             +VT
Sbjct: 458 PKSVT 462

Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. Length = 465

>gnl|CDD|143460 cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like

 Score = 63.7 bits (155), Expect = 5e-11
 Identities = 33/117 (28%), Positives = 59/117 (50%), Gaps = 3/117 (2%)

Query: 255 KKIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSI 314
            +I   GY+++PTI + +  + ++   E F P+  +  F ++DE I   N  K GL++ +
Sbjct: 355 DRIGSKGYYIQPTIFSDVKDDMKIARDEIFGPVQSILKFKTVDEVIKRANNSKYGLAAGV 414

Query: 315 FTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQY 371
           F+K++ +    L  +    G + VN   +  +    FGG K +G GRE G  +   Y
Sbjct: 415 FSKNI-DTANTLS-RALKAGTVWVNC-YDVFDASIPFGGYKMSGIGREKGIYALNNY 468

Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Length = 476

>gnl|CDD|143411 cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like

 Score = 62.7 bits (153), Expect = 9e-11
 Identities = 40/142 (28%), Positives = 66/142 (46%), Gaps = 1/142 (0%)

Query: 55  INPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPL 114
           ++P+TGE IA+V   +  D    + ++ AA+ +W       R + + ++ DA+      L
Sbjct: 2   VDPATGEEIATVPDASAADVDAAVAAAHAAFPSWRRTTPAERSKALLKLADAIEENAEEL 61

Query: 115 GQLVSLEMGKILAEGI-GEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGV 173
             L S   GK L      E+   +D   +  G +RT  G       PGH  +    P+GV
Sbjct: 62  AALESRNTGKPLHLVRDDELPGAVDNFRFFAGAARTLEGPAAGEYLPGHTSMIRREPIGV 121

Query: 174 VGIISAFNFPVAVYGWNAAIAL 195
           V  I+ +N+P+ +  W  A AL
Sbjct: 122 VAQIAPWNYPLMMAAWKIAPAL 143

NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. Length = 450

>gnl|CDD|143437 cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like

 Score = 62.7 bits (153), Expect = 1e-10
 Identities = 40/131 (30%), Positives = 59/131 (45%), Gaps = 25/131 (19%)

Query: 261 GYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVT 320
           GYFVEPTI   +    R+V  E F P++ V  FD+ +EAI   N+   GL+ +++TKD+ 
Sbjct: 357 GYFVEPTIFDDVDRTMRIVQEEIFGPVLTVERFDTEEEAIRLANDTPYGLAGAVWTKDIA 416

Query: 321 NLFK----------WLGPQGSDCGLIN-VNIPTNGAEIGGAFGGEKYTGGGRESGSDSWK 369
              +          W          IN  +     A     +GG K +G GRE G    +
Sbjct: 417 RANRVARRLRAGTVW----------INDYHPYFAEAP----WGGYKQSGIGRELGPTGLE 462

Query: 370 QYCRRSTVTIN 380
           +Y     + IN
Sbjct: 463 EYQETKHININ 473

Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. Length = 482

>gnl|CDD|237391 PRK13473, PRK13473, gamma-aminobutyraldehyde dehydrogenase; Provisional

 Score = 62.2 bits (152), Expect = 1e-10
 Identities = 39/148 (26%), Positives = 68/148 (45%), Gaps = 1/148 (0%)

Query: 49  GEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALR 108
           GE  P  NP+TGE +A + + +       + ++ AA+  W+      R E + ++ DA+ 
Sbjct: 16  GEKQPVYNPATGEVLAEIAEASAAQVDAAVAAADAAFPEWSQTTPKERAEALLKLADAIE 75

Query: 109 HKLVPLGQLVSLEMGK-ILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLEN 167
                  +L SL  GK +      E+   +D+  +  G +R   G        GH  +  
Sbjct: 76  ENADEFARLESLNCGKPLHLALNDEIPAIVDVFRFFAGAARCLEGKAAGEYLEGHTSMIR 135

Query: 168 WNPLGVVGIISAFNFPVAVYGWNAAIAL 195
            +P+GVV  I+ +N+P+ +  W  A AL
Sbjct: 136 RDPVGVVASIAPWNYPLMMAAWKLAPAL 163

Length = 475

>gnl|CDD|183050 PRK11241, gabD, succinate-semialdehyde dehydrogenase I; Provisional

 Score = 62.6 bits (152), Expect = 1e-10
 Identities = 31/102 (30%), Positives = 56/102 (54%), Gaps = 3/102 (2%)

Query: 261 GYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVT 320
           G F +PTI+  +P N++V   ETF P+  +F F    + I   N+ + GL++  + +D++
Sbjct: 365 GNFFQPTILVDVPANAKVAKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLS 424

Query: 321 NLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRE 362
            +F+    +  + G++ +N      E+   FGG K +G GRE
Sbjct: 425 RVFRV--GEALEYGIVGINTGIISNEV-APFGGIKASGLGRE 463

Length = 482

>gnl|CDD|132417 TIGR03374, ABALDH, 1-pyrroline dehydrogenase

 Score = 61.6 bits (149), Expect = 2e-10
 Identities = 31/109 (28%), Positives = 54/109 (49%), Gaps = 12/109 (11%)

Query: 261 GYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVT 320
           GY+  PT++ G   +  +V +E F P+V +  FD  ++ + W N+ + GL+SS++TKDV 
Sbjct: 356 GYYFAPTLLAGAKQDDAIVQKEVFGPVVSITSFDDEEQVVNWANDSQYGLASSVWTKDVG 415

Query: 321 NLFKWLGPQGSDCGLINVN------IPTNGAEIGG------AFGGEKYT 357
              +        C  +N +      +P  G ++ G       +G E YT
Sbjct: 416 RAHRLSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYT 464

Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. Length = 472

>gnl|CDD|132294 TIGR03250, PhnAcAld_DH, putative phosphonoacetaldehyde dehydrogenase

 Score = 61.8 bits (150), Expect = 2e-10
 Identities = 37/133 (27%), Positives = 62/133 (46%), Gaps = 8/133 (6%)

Query: 249 RLFLHKKKIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQ 308
           RL L      R G    PT++  +  +  +V  ETF P+  V  F  +D+AI  +N    
Sbjct: 344 RLLLGNV---RDGALYAPTVLDRVDPSMTLVREETFGPVSPVIRFCDIDDAIRISNSTAY 400

Query: 309 GLSSSIFTKDVTNLFKWLGPQGSDCGLINV-NIPTNGAEIGGAFGGEKYTGGGRESG-SD 366
           GLSS + T  +  + +++       G +NV  +P    E+   FGG K +G G + G  +
Sbjct: 401 GLSSGVCTNRLDYITRFI--AELQVGTVNVWEVPGYRLEL-TPFGGIKDSGLGYKEGVQE 457

Query: 367 SWKQYCRRSTVTI 379
           + K +    T ++
Sbjct: 458 AMKSFTNLKTYSL 470

This family of genes are members of the pfam00171 NAD-dependent aldehyde dehydrogenase family. These genes are observed in Ralstonia eutropha JMP134, Sinorhizobium meliloti 1021, Burkholderia mallei ATCC 23344, Burkholderia thailandensis E264, Burkholderia cenocepacia AU 1054, Burkholderia pseudomallei K96243 and 1710b, Burkholderia xenovorans LB400, Burkholderia sp. 383 and Polaromonas sp. JS666 in close proximity to the PhnW gene (TIGR02326) encoding 2-aminoethyl phosphonate aminotransferase (which generates phosphonoacetaldehyde) and PhnA (TIGR02335) encoding phosphonoacetate hydrolase (not to be confused with the alkylphosphonate utilization operon protein PhnA modeled by TIGR00686). Additionally, transporters believed to be specific for 2-aminoethyl phosphonate are often present. PhnW is, in other organisms, coupled with PhnX (TIGR01422) for the degradation of phosphonoacetaldehyde (GenProp0238), but PhnX is apparently absent in each of the organisms containing this aldehyde reductase. PhnA, characterized in a strain of Pseudomonas fluorescens that has not het been genome sequenced, is only rarely found outside of the PhnW and aldehyde dehydrogenase context. For instance in Rhodopseudomonas and Bordetella bronchiseptica, where it is adjacent to transporters presumably specific for the import of phosphonoacetate. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. Length = 472

>gnl|CDD|236989 PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

 Score = 62.3 bits (152), Expect = 2e-10
 Identities = 44/150 (29%), Positives = 69/150 (46%), Gaps = 13/150 (8%)

Query: 47  ANGEIIPSINPS-TGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGD 105
           A GE+ P INP+   + +  V++    +  + +ES+  A   W A P   R  I+ +  D
Sbjct: 656 AAGEMSPVINPADPRDIVGYVREATPAEVEQALESAVNAAPIWFATPPAERAAILERAAD 715

Query: 106 ALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLL 165
            +  ++  L  L+  E GK  +  I EV+E       AV   R Y+G +           
Sbjct: 716 LMEAQMQTLMGLLVREAGKTFSNAIAEVRE-------AVDFLRYYAGQVRDDFDN----- 763

Query: 166 ENWNPLGVVGIISAFNFPVAVYGWNAAIAL 195
           +   PLG V  IS +NFP+A++    A AL
Sbjct: 764 DTHRPLGPVVCISPWNFPLAIFTGQVAAAL 793

Length = 1318

>gnl|CDD|143453 cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins

 Score = 61.1 bits (149), Expect = 3e-10
 Identities = 53/269 (19%), Positives = 79/269 (29%), Gaps = 120/269 (44%)

Query: 170 PLGVVGIISAFNFPV-------------------------------------------AV 186
           PLGVV II  +N+PV                                           A 
Sbjct: 108 PLGVVLIIGPWNYPVLLALSPLVGAIAAGCTVVLKPSELTPHTAALLAELVPKYLDPDAF 167

Query: 187 YGWNAAIALVGVAVQSRFGK-----------------------LLLELGGNNAIIVNEDA 223
                 +      ++ +F K                       + LELGG + +IV ++A
Sbjct: 168 QVVQGGVPETTALLEQKFDKIFYTGSGRVGRIIAEAAAKHLTPVTLELGGKSPVIVTKNA 227

Query: 224 DLNLAQQCLVFACCGTAGQ--------------------RCTTTRRLF------------ 251
           DL LA + +++   G AGQ                            F            
Sbjct: 228 DLELAAKRILWGKFGNAGQICVAPDYVLVDPSVYDEFVEELKKVLDEFYPGGANASPDYT 287

Query: 252 ----------LHKK------KI------DRPGYFVEPTIVTGLPHNSRVVHRETFAPIVY 289
                     L         K+      D    F+ PTIV+ +  +  ++  E F P++ 
Sbjct: 288 RIVNPRHFNRLKSLLDTTKGKVVIGGEMDEATRFIPPTIVSDVSWDDSLMSEELFGPVLP 347

Query: 290 VFPFDSLDEAITWNNEVKQGLSSSIFTKD 318
           +   D LDEAI   N     L+  IFT D
Sbjct: 348 IIKVDDLDEAIKVINSRDTPLALYIFTDD 376

Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. Length = 436

>gnl|CDD|143401 cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11

 Score = 60.7 bits (148), Expect = 4e-10
 Identities = 37/155 (23%), Positives = 63/155 (40%), Gaps = 5/155 (3%)

Query: 35  VNPGVYDGTSWKANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAA-LPA 93
               + +G   +++G+ I   +P  GE I SV   +  +     E++  A   W   +P 
Sbjct: 1   QFKYLINGEWKESSGKTIEVYSPIDGEVIGSVPALSALEILEAAETAYDAGRGWWPTMPL 60

Query: 94  PRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGS 153
             R + + +  D L+     +  L+  E+GK L + + EV   ID     +   +   G 
Sbjct: 61  EERIDCLHKFADLLKENKEEVANLLMWEIGKTLKDALKEVDRTIDYIRDTIEELKRLDGD 120

Query: 154 ILPSERPGHVL-LENW---NPLGVVGIISAFNFPV 184
            LP +               PLGVV  I  FN+P+
Sbjct: 121 SLPGDWFPGTKGKIAQVRREPLGVVLAIGPFNYPL 155

NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. Length = 473

>gnl|CDD|143434 cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like

 Score = 60.5 bits (147), Expect = 5e-10
 Identities = 48/160 (30%), Positives = 74/160 (46%), Gaps = 6/160 (3%)

Query: 40  YDGTSWKA--NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRG 97
           + G  W A   GE   +I P TG+    V +   +D    ++++ AA  AW       R 
Sbjct: 4   FIGGEWVAPVKGEYFDNITPVTGKVFCEVPRSTAEDIELALDAAHAAKEAWGKTSVAERA 63

Query: 98  EIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIG-EVQEFIDICDYAVGLSRTYSGSILP 156
            I+ +I D +   L  L    + + GK + E +  ++   ID   Y  G  R   GSI  
Sbjct: 64  NILNKIADRMEANLEMLAVAETWDNGKPVRETLAADIPLAIDHFRYFAGCIRAQEGSI-- 121

Query: 157 SERPGHVLLENWN-PLGVVGIISAFNFPVAVYGWNAAIAL 195
           SE   + +  +++ PLGVVG I  +NFP+ +  W  A AL
Sbjct: 122 SEIDENTVAYHFHEPLGVVGQIIPWNFPLLMATWKLAPAL 161

Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. Length = 479

>gnl|CDD|143438 cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like

 Score = 60.0 bits (146), Expect = 8e-10
 Identities = 52/250 (20%), Positives = 82/250 (32%), Gaps = 70/250 (28%)

Query: 192 AIALVGVAVQSRFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLF 251
           AI         R G   LELGG    IV +DADL+ A   L  A    AGQ C    R+ 
Sbjct: 212 AIMAAAAPTLKRLG---LELGGKTPCIVFDDADLDAALPKLERALTIFAGQFCMAGSRVL 268

Query: 252 LHKKKIDR---------------PGY----------------FVEPTIVTGLPHNSRVVH 280
           + +   D                PG                  V+  +   +   + VV 
Sbjct: 269 VQRSIADEVRDRLAARLAAVKVGPGLDPASDMGPLIDRANVDRVDRMVERAIAAGAEVVL 328

Query: 281 R-------------------------------ETFAPIVYVFPFDSLDEAITWNNEVKQG 309
           R                               E F P++ +  FD   EA+   N+   G
Sbjct: 329 RGGPVTEGLAKGAFLRPTLLEVDDPDADIVQEEIFGPVLTLETFDDEAEAVALANDTDYG 388

Query: 310 LSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGA-FGGEKYTGGGRESGSDSW 368
           L++S++T+D+    +    +    G + +N          A  GG + +G GR  G  + 
Sbjct: 389 LAASVWTRDLARAMRV--ARAIRAGTVWIN--DWNKLFAEAEEGGYRQSGLGRLHGVAAL 444

Query: 369 KQYCRRSTVT 378
           + +     + 
Sbjct: 445 EDFIEYKHIY 454

Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. Length = 455

>gnl|CDD|200087 TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative

 Score = 59.9 bits (145), Expect = 1e-09
 Identities = 51/238 (21%), Positives = 85/238 (35%), Gaps = 62/238 (26%)

Query: 201 QSRFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK----- 255
           Q    +++ E+GG + +IV+EDAD+ LA Q    +  G AGQ+C+   R  +H+K     
Sbjct: 273 QKHLKRVIAEMGGKDTVIVDEDADIELAAQSAFTSAFGFAGQKCSAGSRAVVHEKVYDEV 332

Query: 256 --------------KIDRPGYFVEPTI--------------------------------- 268
                           D    +V P I                                 
Sbjct: 333 VERFVEITESLKVGPPDSADVYVGPVIDQKSFNKIMEYIEIGKAEGRLVSGGCGDDSKGY 392

Query: 269 ------VTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNL 322
                    +   +R+   E F P+V        DEA+   N  + GL+  + + +  ++
Sbjct: 393 FIGPTIFADVDRKARLAQEEIFGPVVAFIRASDFDEALEIANNTEYGLTGGVISNNRDHI 452

Query: 323 FKWLGPQGSDCGLINVNIPTNGAEIG-GAFGGEKYTG-GGRESGSDSWKQYCRRSTVT 378
            +       + G +  N    GA +G   FGG K +G   +  G D    + +  TVT
Sbjct: 453 NR--AKAEFEVGNLYFNRNITGAIVGYQPFGGFKMSGTDSKAGGPDYLALFMQAKTVT 508

This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs [Energy metabolism, Amino acids and amines]. Length = 511

>gnl|CDD|143414 cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like

 Score = 58.8 bits (143), Expect = 2e-09
 Identities = 30/106 (28%), Positives = 47/106 (44%), Gaps = 1/106 (0%)

Query: 78  IESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFI 137
           + ++RAA+  WAAL    R  I+R+  + L+     L +L+S E GK L E   EV    
Sbjct: 6   VAAARAAFPGWAALSLEERAAILRRFAELLKANKEELARLISRETGKPLWEAQTEVAAMA 65

Query: 138 DICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFP 183
              D ++      +G    +       +    P GV+ +   FNFP
Sbjct: 66  GKIDISIKAYHERTGE-RATPMAQGRAVLRHRPHGVMAVFGPFNFP 110

N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. Length = 431

>gnl|CDD|143458 cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L

 Score = 57.9 bits (140), Expect = 4e-09
 Identities = 40/155 (25%), Positives = 66/155 (42%), Gaps = 6/155 (3%)

Query: 47  ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAY--AAWAALPAPRRGEIVRQIG 104
             G+   +INP+ G  I  V    V+D  R + +++ A+    W  + A  RG ++ ++ 
Sbjct: 18  EGGKTYNTINPTDGSVICKVSLATVEDVDRAVAAAKEAFENGEWGKMNARDRGRLMYRLA 77

Query: 105 DALRHKLVPLGQLVSLEMGKILAEGIG-EVQEFIDICDYAVGLSRTYSGSILP--SERPG 161
           D +      L  + SL+ G +    +   V   I    Y  G      G  +P    RP 
Sbjct: 78  DLMEEHQEELATIESLDSGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGKTIPINQARPN 137

Query: 162 HVL-LENWNPLGVVGIISAFNFPVAVYGWNAAIAL 195
             L L    P+GV GI+  +N+P+ +  W  A  L
Sbjct: 138 RNLTLTKREPIGVCGIVIPWNYPLMMLAWKMAACL 172

10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. Length = 486

>gnl|CDD|236501 PRK09407, gabD2, succinic semialdehyde dehydrogenase; Reviewed

 Score = 57.6 bits (140), Expect = 4e-09
 Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 3/57 (5%)

Query: 209 LELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKKKIDRPGYFVE 265
           LELGG N +IV +DADL+ A    V AC   AGQ C +  R+++H+   D    FV 
Sbjct: 260 LELGGKNPMIVLDDADLDKAAAGAVRACFSNAGQLCISIERIYVHESIYDE---FVR 313

Length = 524

>gnl|CDD|143428 cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like

 Score = 57.4 bits (139), Expect = 5e-09
 Identities = 32/112 (28%), Positives = 54/112 (48%), Gaps = 15/112 (13%)

Query: 259 RPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKD 318
             GYF+ PT+   +P +SR+   E F P++ V  F + DEAI   N+ + GL++++ ++D
Sbjct: 339 EKGYFIAPTVFADVPTDSRIWREEIFGPVLCVRSFATEDEAIALANDSEYGLAAAVISRD 398

Query: 319 ------VTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESG 364
                 V            + G++ +N           +GG K +G GRE G
Sbjct: 399 AERCDRVAEAL--------EAGIVWINCS-QPCFPQAPWGGYKRSGIGRELG 441

Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. Length = 456

>gnl|CDD|183918 PRK13252, PRK13252, betaine aldehyde dehydrogenase; Provisional

 Score = 57.2 bits (139), Expect = 6e-09
 Identities = 40/127 (31%), Positives = 63/127 (49%), Gaps = 11/127 (8%)

Query: 261 GYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVT 320
           G FV PT+ T    +  +V  E F P++ V  FD  DE I   N+ + GL++ +FT D++
Sbjct: 364 GAFVAPTVFTDCTDDMTIVREEIFGPVMSVLTFDDEDEVIARANDTEYGLAAGVFTADLS 423

Query: 321 NLFKWLGP-QGSDCGLINVNIPTNG---AEIGGAFGGEKYTGGGRESGSDSWKQYCRRST 376
              + +   +   C  IN    T G   AE+    GG K +G GRE+G  + + Y +  +
Sbjct: 424 RAHRVIHQLEAGIC-WIN----TWGESPAEM--PVGGYKQSGIGRENGIATLEHYTQIKS 476

Query: 377 VTINHGK 383
           V +  G 
Sbjct: 477 VQVEMGP 483

Length = 488

>gnl|CDD|143461 cd07143, ALDH_AldA_AN0554, Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like

 Score = 56.8 bits (137), Expect = 7e-09
 Identities = 40/169 (23%), Positives = 70/169 (41%), Gaps = 10/169 (5%)

Query: 34  SVNPGVYDGTSW--KANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAAL 91
               G++    +    +G  +   NPSTG+ I  + +    D    +E + AA+     L
Sbjct: 4   EQPTGLFINGEFVDSVHGGTVKVYNPSTGKLITKIAEATEADVDIAVEVAHAAFETDWGL 63

Query: 92  --PAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGK-ILAEGIGEVQEFIDICDYAVGLSR 148
                +RG  + ++ D +   L  L  + +L+ GK        +VQ   D   Y  G + 
Sbjct: 64  KVSGSKRGRCLSKLADLMERNLDYLASIEALDNGKTFGTAKRVDVQASADTFRYYGGWAD 123

Query: 149 TYSGSILP--SERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL 195
              G ++    ++  +   E   P+GV G I  +NFP+ +  W  A AL
Sbjct: 124 KIHGQVIETDIKKLTYTRHE---PIGVCGQIIPWNFPLLMCAWKIAPAL 169

NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. Length = 481

>gnl|CDD|143419 cd07101, ALDH_SSADH2_GabD2, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like

 Score = 56.9 bits (138), Expect = 8e-09
 Identities = 26/57 (45%), Positives = 33/57 (57%), Gaps = 3/57 (5%)

Query: 209 LELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKKKIDRPGYFVE 265
           LELGG N +IV EDADL+ A    V AC   AGQ C +  R+++H+   D    FV 
Sbjct: 224 LELGGKNPMIVLEDADLDKAAAGAVRACFSNAGQLCVSIERIYVHESVYDE---FVR 277

Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). Length = 454

>gnl|CDD|182233 PRK10090, PRK10090, aldehyde dehydrogenase A; Provisional

 Score = 56.3 bits (136), Expect = 1e-08
 Identities = 32/96 (33%), Positives = 44/96 (45%)

Query: 101 RQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERP 160
           R+I   +R +   +  L+  E GKI      EV    D  DY    +R Y G I+ S+RP
Sbjct: 2   RKIAAGIRERASEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEGEIIQSDRP 61

Query: 161 GHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALV 196
           G  +L     LGV   I  +NFP  +     A AL+
Sbjct: 62  GENILLFKRALGVTTGILPWNFPFFLIARKMAPALL 97

Length = 409

>gnl|CDD|143456 cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like

 Score = 55.6 bits (135), Expect = 2e-08
 Identities = 32/110 (29%), Positives = 51/110 (46%), Gaps = 16/110 (14%)

Query: 261 GYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKD-- 318
           GYFV+PT+   +  +  +   E F P++ + P+D  DEAI   N+   GL+  +++ D  
Sbjct: 352 GYFVKPTVFADVTPDMTIAREEIFGPVLSIIPYDDEDEAIAIANDTPYGLAGYVWSADPE 411

Query: 319 ----VTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESG 364
               V    +         G +++N        G  FGG K +G GRE G
Sbjct: 412 RARAVARRLR--------AGQVHIN--GAAFNPGAPFGGYKQSGNGREWG 451

The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. Length = 466

>gnl|CDD|143434 cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like

 Score = 55.2 bits (133), Expect = 2e-08
 Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 13/107 (12%)

Query: 261 GYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVT 320
           GY+V  T   G  +  R+   E F P++ V  F   +EA+   N+   GL + ++T+D  
Sbjct: 364 GYYVPTTFKGG--NKMRIFQEEIFGPVLAVTTFKDEEEALEIANDTLYGLGAGVWTRDGN 421

Query: 321 NLFKWLGPQGSDCGLINVN----IPTNGAEIGGAFGGEKYTGGGRES 363
             ++    +G   G +  N     P        AFGG K +G GRE+
Sbjct: 422 TAYRM--GRGIQAGRVWTNCYHLYPA-----HAAFGGYKQSGIGREN 461

Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. Length = 479

>gnl|CDD|143454 cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldehyde dehydrogenase ywdH-like

 Score = 55.6 bits (135), Expect = 2e-08
 Identities = 44/162 (27%), Positives = 64/162 (39%), Gaps = 52/162 (32%)

Query: 209 LELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRC----------------------TT 246
           LELGG +  IV+EDA+L LA + +V+     AGQ C                        
Sbjct: 205 LELGGKSPCIVDEDANLKLAAKRIVWGKFLNAGQTCVAPDYVLVHESVKEKFIKELKEEI 264

Query: 247 T----------------------RRL--FLHKKKI------DRPGYFVEPTIVTGLPHNS 276
                                   RL   L   KI      DR   ++EPTI+  +  + 
Sbjct: 265 KKFYGEDPLESPDYGRIINEKHFDRLAGLLDNGKIVFGGNTDRETLYIEPTILDNVTWDD 324

Query: 277 RVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKD 318
            V+  E F PI+ V  +D+LDEAI       + L+  +F++D
Sbjct: 325 PVMQEEIFGPILPVLTYDTLDEAIEIIKSRPKPLALYLFSED 366

Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. Length = 449

>gnl|CDD|143420 cd07102, ALDH_EDX86601, Uncharacterized aldehyde dehydrogenase of Synechococcus sp

 Score = 54.6 bits (132), Expect = 4e-08
 Identities = 23/59 (38%), Positives = 38/59 (64%)

Query: 260 PGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKD 318
            G ++ PT++T + H+ RV+  ETF P+V +    S  EAI   N+ + GL++S++TKD
Sbjct: 336 GGAYLAPTVLTNVDHSMRVMREETFGPVVGIMKVKSDAEAIALMNDSEYGLTASVWTKD 394

PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. Length = 452

>gnl|CDD|143407 cd07088, ALDH_LactADH-AldA, Escherichia coli lactaldehyde dehydrogenase AldA-like

 Score = 52.7 bits (127), Expect = 1e-07
 Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 3/60 (5%)

Query: 206 KLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKKKIDRPGYFVE 265
           K+ LELGG    IV +DADL+LA + +V +     GQ CT   R+++H+   D    F+E
Sbjct: 238 KVSLELGGKAPAIVMKDADLDLAVKAIVDSRIINCGQVCTCAERVYVHEDIYDE---FME 294

Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. Length = 468

>gnl|CDD|143428 cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like

 Score = 52.7 bits (127), Expect = 1e-07
 Identities = 22/45 (48%), Positives = 28/45 (62%)

Query: 209 LELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLH 253
           LELGG + IIV +DADL  A +  +F C    GQ C+ T RL +H
Sbjct: 228 LELGGKSPIIVFDDADLEKAVEWAMFGCFWNNGQICSATSRLLVH 272

Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. Length = 456

>gnl|CDD|143470 cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde dehydrogenase II-like

 Score = 53.1 bits (128), Expect = 1e-07
 Identities = 26/72 (36%), Positives = 35/72 (48%)

Query: 184 VAVYGWNAAIALVGVAVQSRFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQR 243
           ++  G  A    VG A      K+ LELGG NA+IV +DADL+LA     +      GQ 
Sbjct: 193 ISFTGSTAVGRKVGEAAGRHLKKVSLELGGKNALIVLDDADLDLAASNGAWGAFLHQGQI 252

Query: 244 CTTTRRLFLHKK 255
           C    R  +H+ 
Sbjct: 253 CMAAGRHLVHES 264

NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. Length = 443

>gnl|CDD|143412 cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogenase family 8 member A1-like

 Score = 52.6 bits (127), Expect = 2e-07
 Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 3/60 (5%)

Query: 206 KLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKKKIDRPGYFVE 265
            + LELGG N  IV  DADL+ A    V +     G+ C    R+ + +   D    F+E
Sbjct: 222 PVSLELGGKNPNIVFADADLDRAVDAAVRSSFSNNGEVCLAGSRILVQRSIYDE---FLE 278

In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. Length = 455

>gnl|CDD|132284 TIGR03240, arg_catab_astD, succinylglutamic semialdehyde dehydrogenase

 Score = 52.4 bits (126), Expect = 2e-07
 Identities = 22/46 (47%), Positives = 32/46 (69%)

Query: 207 LLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFL 252
           L LE+GGNN +IV+E AD++ A   ++ +   +AGQRCT  RRL +
Sbjct: 238 LALEMGGNNPLIVDEVADIDAAVHLIIQSAFISAGQRCTCARRLLV 283

Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism [Energy metabolism, Amino acids and amines]. Length = 484

>gnl|CDD|143432 cd07114, ALDH_DhaS, Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like

 Score = 52.2 bits (126), Expect = 3e-07
 Identities = 29/101 (28%), Positives = 39/101 (38%), Gaps = 9/101 (8%)

Query: 184 VAVYGWNAAIALVGVAVQSRFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQR 243
           +A  G       +  A       + LELGG +  IV +DADL+ A   +V      AGQ 
Sbjct: 202 IAFTGGTETGRHIARAAAENLAPVTLELGGKSPNIVFDDADLDAAVNGVVAGIFAAAGQT 261

Query: 244 CTTTRRLFLHKKKIDRPGYFVE------PTIVTGLPHNSRV 278
           C    RL + +   D    FVE        I  G P +   
Sbjct: 262 CVAGSRLLVQRSIYDE---FVERLVARARAIRVGDPLDPET 299

Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. Length = 457

>gnl|CDD|143423 cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogenase, DoxF-like

 Score = 51.8 bits (125), Expect = 3e-07
 Identities = 25/58 (43%), Positives = 32/58 (55%), Gaps = 3/58 (5%)

Query: 208 LLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKKKIDRPGYFVE 265
           LLELGG    IV EDADL+ A    +F     +GQ C +T R+ +H+   D    FVE
Sbjct: 208 LLELGGKAPAIVLEDADLDAAANAALFGAFLNSGQICMSTERIIVHESIADE---FVE 262

Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. Length = 432

>gnl|CDD|143404 cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2

 Score = 51.4 bits (124), Expect = 4e-07
 Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 2/81 (2%)

Query: 261 GYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVT 320
           G FV PTI+  +  + ++   E F P++ +   D+LDEAI   N    G  ++IFT+   
Sbjct: 358 GNFVGPTILDNVTPDMKIYKEEIFGPVLSIVRVDTLDEAIAIINANPYGNGAAIFTRSGA 417

Query: 321 NLFKWLGPQGSDCGLINVNIP 341
              K+   +  D G++ +N+P
Sbjct: 418 AARKFQ--REVDAGMVGINVP 436

Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. Length = 478

>gnl|CDD|179543 PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehydrogenase; Provisional

 Score = 51.1 bits (123), Expect = 5e-07
 Identities = 21/74 (28%), Positives = 37/74 (50%)

Query: 249 RLFLHKKKIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQ 308
           RL L  +  D  GYF++PTI   +   +R++  E F P+V        D A+   N  + 
Sbjct: 382 RLVLGGEGDDSKGYFIQPTIFADVDPKARIMQEEIFGPVVAFIKAKDFDHALEIANNTEY 441

Query: 309 GLSSSIFTKDVTNL 322
           GL+ ++ + +  +L
Sbjct: 442 GLTGAVISNNREHL 455

Length = 514

>gnl|CDD|240392 PTZ00381, PTZ00381, aldehyde dehydrogenase family protein; Provisional

 Score = 50.8 bits (122), Expect = 6e-07
 Identities = 48/235 (20%), Positives = 81/235 (34%), Gaps = 71/235 (30%)

Query: 209 LELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQ-------------------------- 242
           LELGG + +IV++  +L +A + + +     AGQ                          
Sbjct: 214 LELGGKSPVIVDKSCNLKVAARRIAWGKFLNAGQTCVAPDYVLVHRSIKDKFIEALKEAI 273

Query: 243 ------------------RCTTTRRL----FLHKKKI------DRPGYFVEPTIVTGLPH 274
                                 T+RL      H  K+      D    +V PTI+     
Sbjct: 274 KEFFGEDPKKSEDYSRIVNEFHTKRLAELIKDHGGKVVYGGEVDIENKYVAPTIIVNPDL 333

Query: 275 NSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGS--- 331
           +S ++  E F PI+ +  ++++DE + + N   + L+   F +D  +    L    S   
Sbjct: 334 DSPLMQEEIFGPILPILTYENIDEVLEFINSRPKPLALYYFGEDKRHKELVLENTSSGAV 393

Query: 332 ---DC--GLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTINH 381
              DC   L+N N+P         FGG   +G G   G   +  +     V    
Sbjct: 394 VINDCVFHLLNPNLP---------FGGVGNSGMGAYHGKYGFDTFSHPKPVLNKS 439

Length = 493

>gnl|CDD|130783 TIGR01722, MMSDH, methylmalonic acid semialdehyde dehydrogenase

 Score = 50.3 bits (120), Expect = 1e-06
 Identities = 59/242 (24%), Positives = 84/242 (34%), Gaps = 67/242 (27%)

Query: 202 SRFGKLLLELGG-NNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFL-------- 252
           S  GK +  LGG  N ++V  DAD + A   LV A  G AGQRC       L        
Sbjct: 235 SAHGKRVQALGGAKNHMVVMPDADKDAAADALVGAAYGAAGQRCMAISAAVLVGAADEWV 294

Query: 253 -----------------------------HKKKI----------------DRPGYFVE-- 265
                                         K ++                D  GY V+  
Sbjct: 295 PEIRERAEKIRIGPGDDPGAEMGPLITPQAKDRVASLIAGGAAEGAEVLLDGRGYKVDGY 354

Query: 266 -------PTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKD 318
                  PT++  +P   +    E F P++ V   D+L+EAI   N    G  ++IFT+D
Sbjct: 355 EEGNWVGPTLLERVPPTMKAYQEEIFGPVLCVLEADTLEEAIALINASPYGNGTAIFTRD 414

Query: 319 VTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEK--YTGGGRESGSDSWKQYCRRST 376
                ++      + G + VN+P        +F G K  + G     G      Y R  T
Sbjct: 415 GAAARRF--QHEIEVGQVGVNVPIPVPLPYFSFTGWKDSFFGDHHIYGKQGTHFYTRGKT 472

Query: 377 VT 378
           VT
Sbjct: 473 VT 474

Involved in valine catabolism, methylmalonate-semialdehyde dehydrogenase catalyzes the irreversible NAD+- and CoA-dependent oxidative decarboxylation of methylmalonate semialdehyde to propionyl-CoA. Methylmalonate-semialdehyde dehydrogenase has been characterized in both prokaryotes and eukaryotes, functioning as a mammalian tetramer and a bacterial homodimer. Although similar in monomeric molecular mass and enzymatic activity, the N-terminal sequence in P.aeruginosa does not correspond with the N-terminal sequence predicted for rat liver. Sequence homology to a variety of prokaryotic and eukaryotic aldehyde dehydrogenases places MMSDH in the aldehyde dehydrogenase (NAD+) superfamily (pfam00171), making MMSDH's CoA requirement unique among known ALDHs. Methylmalonate semialdehyde dehydrogenase is closely related to betaine aldehyde dehydrogenase, 2-hydroxymuconic semialdehyde dehydrogenase, and class 1 and 2 aldehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus [Energy metabolism, Amino acids and amines]. Length = 477

>gnl|CDD|179543 PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehydrogenase; Provisional

 Score = 49.9 bits (120), Expect = 1e-06
 Identities = 21/54 (38%), Positives = 37/54 (68%)

Query: 206 KLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKKKIDR 259
           +++ E+GG +AI+V+EDADL+LA + +V +  G +GQ+C+   R  +H+   D 
Sbjct: 282 RVIAEMGGKDAIVVDEDADLDLAAESIVASAFGFSGQKCSACSRAIVHEDVYDE 335

Length = 514

>gnl|CDD|143421 cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like

 Score = 49.4 bits (119), Expect = 2e-06
 Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 3/60 (5%)

Query: 206 KLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKKKIDRPGYFVE 265
           ++ LELGGN   IV +DADL+ A    + +    AGQ C    R+++H+   D    FVE
Sbjct: 222 RVSLELGGNAPFIVFDDADLDKAVDGAIASKFRNAGQTCVCANRIYVHESIYDE---FVE 278

Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. Length = 451

>gnl|CDD|181873 PRK09457, astD, succinylglutamic semialdehyde dehydrogenase; Reviewed

 Score = 49.2 bits (118), Expect = 2e-06
 Identities = 21/49 (42%), Positives = 34/49 (69%), Gaps = 1/49 (2%)

Query: 205 GKLL-LELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFL 252
            K+L LE+GGNN ++++E AD++ A   ++ +   +AGQRCT  RRL +
Sbjct: 237 EKILALEMGGNNPLVIDEVADIDAAVHLIIQSAFISAGQRCTCARRLLV 285

Length = 487

>gnl|CDD|143452 cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehyde dehydrogenase AlkH-like

 Score = 49.5 bits (119), Expect = 2e-06
 Identities = 16/63 (25%), Positives = 36/63 (57%)

Query: 256 KIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIF 315
           + D    ++ PT++T +  + +++  E F P++ +  ++ LDE I + N   + L+  +F
Sbjct: 311 QFDAAQRYIAPTVLTNVTPDMKIMQEEIFGPVLPIITYEDLDEVIEYINAKPKPLALYVF 370

Query: 316 TKD 318
           +KD
Sbjct: 371 SKD 373

Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. Length = 433

>gnl|CDD|182108 PRK09847, PRK09847, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional

 Score = 49.5 bits (118), Expect = 2e-06
 Identities = 33/159 (20%), Positives = 66/159 (41%), Gaps = 16/159 (10%)

Query: 47  ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAY--AAWAALPAPRRGEIVRQIG 104
           A  E   +++P T   +A + +G   D  R + ++R  +    W+     +R  ++ ++ 
Sbjct: 32  AENETFETVDPVTQAPLAKIARGKSVDIDRAVSAARGVFERGDWSLSSPAKRKAVLNKLA 91

Query: 105 DALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICD-------YAVGLSRTYSGSILPS 157
           D +      L  L +L+ GK +   + +     DI         YA  + + Y G +  +
Sbjct: 92  DLMEAHAEELALLETLDTGKPIRHSLRD-----DIPGAARAIRWYAEAIDKVY-GEVATT 145

Query: 158 ERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALV 196
                 ++    P+GV+  I  +NFP+ +  W    AL 
Sbjct: 146 SSHELAMIVR-EPVGVIAAIVPWNFPLLLTCWKLGPALA 183

Length = 494

>gnl|CDD|182108 PRK09847, PRK09847, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional

 Score = 49.1 bits (117), Expect = 2e-06
 Identities = 31/130 (23%), Positives = 62/130 (47%), Gaps = 4/130 (3%)

Query: 250 LFLHKKKIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQG 309
           L L  +        + PTI   +  N+ +   E F P++ V  F S ++A+   N+ + G
Sbjct: 366 LLLDGRNAGLAAA-IGPTIFVDVDPNASLSREEIFGPVLVVTRFTSEEQALQLANDSQYG 424

Query: 310 LSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWK 369
           L ++++T+D++   +    +    G + VN   N  ++   FGG K +G GR+    + +
Sbjct: 425 LGAAVWTRDLSRAHRM--SRRLKAGSVFVN-NYNDGDMTVPFGGYKQSGNGRDKSLHALE 481

Query: 370 QYCRRSTVTI 379
           ++    T+ I
Sbjct: 482 KFTELKTIWI 491

Length = 494

>gnl|CDD|143406 cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins

 Score = 49.4 bits (119), Expect = 2e-06
 Identities = 19/67 (28%), Positives = 39/67 (58%)

Query: 252 LHKKKIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLS 311
           +   ++D+   ++ PTI+  +  +S ++  E F PI+ +  +D LDEAI + N   + L+
Sbjct: 300 VIGGQVDKEERYIAPTILDDVSPDSPLMQEEIFGPILPILTYDDLDEAIEFINSRPKPLA 359

Query: 312 SSIFTKD 318
             +F++D
Sbjct: 360 LYLFSED 366

ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. Length = 426

>gnl|CDD|143443 cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA

 Score = 49.1 bits (118), Expect = 3e-06
 Identities = 38/136 (27%), Positives = 63/136 (46%), Gaps = 9/136 (6%)

Query: 251 FLHKKKIDRP-GYFVEPTIVTGLPHNSRVVHRETFAPIVYV--FPFDSLDEAITWNNEVK 307
            +    +D   GYFV P I+         +  E F PI++V  F  + LDEAI   N   
Sbjct: 377 LIAPAPLDDGNGYFVAPGIIEI--VGIFDLTTEVFGPILHVIRFKAEDLDEAIEDINATG 434

Query: 308 QGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIG-GAFGGEKYTGGGRESGSD 366
            GL+  I ++D   +  W   +  + G + +N    GA +G   FGG   +G G ++G  
Sbjct: 435 YGLTLGIHSRDEREIEYWR--ERVEAGNLYINRNITGAIVGRQPFGGWGLSGTGPKAGGP 492

Query: 367 SW-KQYCRRSTVTINH 381
           ++  ++    TV++N 
Sbjct: 493 NYLLRFGNEKTVSLNT 508

The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Length = 518

>gnl|CDD|143402 cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like

 Score = 48.7 bits (116), Expect = 3e-06
 Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 5/119 (4%)

Query: 249 RLFLHKKKIDRPGYFVEPTIVTGLPHNSRVVHRETFAPI--VYVFPFDSLDEAITWNNEV 306
           +L L  K+++  GYFV PT+V  +P  +R+   E F P+  V  +  D   EA+   N  
Sbjct: 366 QLVLGGKRLEGEGYFVAPTVVEEVPPKARIAQEEIFGPVLSVIRYKDDDFAEALEVANST 425

Query: 307 KQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIG-GAFGGEKYTGGGRESG 364
             GL+  ++++   +L +    +    G + +N    GA +G   FGG K +G   ++G
Sbjct: 426 PYGLTGGVYSRKREHL-EEARRE-FHVGNLYINRKITGALVGVQPFGGFKLSGTNAKTG 482

ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. Length = 500

>gnl|CDD|212007 TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, Rv0768 family

 Score = 48.6 bits (116), Expect = 4e-06
 Identities = 42/152 (27%), Positives = 69/152 (45%), Gaps = 12/152 (7%)

Query: 41  DGTSWKANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAY--AAWAALPAPRRGE 98
           DG     +    P++NP+T E +         D    I ++R A+    W+   A  R  
Sbjct: 6   DGKLVAGSAGTFPTVNPATEEVLGVAADATAADMDAAIAAARRAFDETDWSRDTA-LRVR 64

Query: 99  IVRQIGDALRHKLVPLGQLVSLEMG--KILAEGIGEVQEFIDICDYAVGLSRTYS----- 151
            +RQ+ DALR  +  L +L   E+G  ++L  G  +++  +D   +A  L+ +Y+     
Sbjct: 65  CLRQLRDALRAHVEELRELTIAEVGAPRMLTAG-AQLEGPVDDLGFAADLAESYAWTTDL 123

Query: 152 GSILPSERPGHVLLENWNPLGVVGIISAFNFP 183
           G   P   P    L     +GVVG I+ +NFP
Sbjct: 124 GVASPMGIPTRRTLRR-EAVGVVGAITPWNFP 154

This family describes a branch of the aldehyde dehydrogenase (NAD) family (see pfam00171) that includes Rv0768 from Mycobacterium tuberculosis. All members of this family belong to species predicted to synthesize mycofactocin, suggesting that this enzyme or another upstream or downstream in the same pathway might be mycofactocin-dependent. However, the taxonomic range of this family is not nearly broad enough to make that relationship conclusive [Unknown function, Enzymes of unknown specificity]. Length = 480

>gnl|CDD|143466 cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1

 Score = 48.2 bits (115), Expect = 4e-06
 Identities = 39/168 (23%), Positives = 64/168 (38%), Gaps = 57/168 (33%)

Query: 209 LELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHK-------------- 254
           LE GG   +IV+  ADL+     LV      AGQ C + +R+F+                
Sbjct: 230 LEHGGAAPVIVDRSADLDAMIPPLVKGGFYHAGQVCVSVQRVFVPAEIADDFAQRLAAAA 289

Query: 255 ---------------------KKIDRPGYFVEP------TIVTG---------------- 271
                                +++DR   +V         ++ G                
Sbjct: 290 EKLVVGDPTDPDTEVGPLIRPREVDRVEEWVNEAVAAGARLLCGGKRLSDTTYAPTVLLD 349

Query: 272 LPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDV 319
            P +++V  +E F P+V V+ +D LDEAI   N +     +++FTKD+
Sbjct: 350 PPRDAKVSTQEIFGPVVCVYSYDDLDEAIAQANSLPVAFQAAVFTKDL 397

Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 455

>gnl|CDD|143446 cd07128, ALDH_MaoC-N, N-terminal domain of the monoamine oxidase C dehydratase

 Score = 47.6 bits (114), Expect = 8e-06
 Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 2/64 (3%)

Query: 261 GYFVEPTIVTGL-PHNSRVVHR-ETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKD 318
           G F  PT++    P  +  VH  E F P+  + P+DSL EAI      +  L +S+ T D
Sbjct: 374 GAFFPPTLLLCDDPDAATAVHDVEAFGPVATLMPYDSLAEAIELAARGRGSLVASVVTND 433

Query: 319 VTNL 322
               
Sbjct: 434 PAFA 437

The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH. Length = 513

>gnl|CDD|143436 cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbosone dehydrogenase-like

 Score = 46.6 bits (111), Expect = 1e-05
 Identities = 22/49 (44%), Positives = 29/49 (59%)

Query: 206 KLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHK 254
           K+ LELGG N  IV  DADL+ A   +VF     AG+ C +  RL +H+
Sbjct: 224 KVSLELGGKNPQIVFADADLDAAADAVVFGVYFNAGECCNSGSRLLVHE 272

Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. Length = 454

>gnl|CDD|166060 PLN02419, PLN02419, methylmalonate-semialdehyde dehydrogenase [acylating]

 Score = 47.0 bits (111), Expect = 1e-05
 Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 6/97 (6%)

Query: 249 RLFLHKKKIDRPGY----FVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNN 304
           +L L  + I  PGY    F+ PTI++G+  +      E F P++     +S DEAI+  N
Sbjct: 454 KLLLDGRDIVVPGYEKGNFIGPTILSGVTPDMECYKEEIFGPVLVCMQANSFDEAISIIN 513

Query: 305 EVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIP 341
           + K G  ++IFT       K+      + G I +N+P
Sbjct: 514 KNKYGNGAAIFTSSGAAARKF--QMDIEAGQIGINVP 548

Length = 604

>gnl|CDD|132260 TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semialdehyde dehydrogenase

 Score = 45.9 bits (109), Expect = 2e-05
 Identities = 41/166 (24%), Positives = 61/166 (36%), Gaps = 25/166 (15%)

Query: 48  NGEIIPS------INPSTGETIASVQQGNVQDYHRCIESSRAAYAA-WAALPAPRRG--- 97
           NG  + S      INP  G  IA V +    +    + ++RAA    W  +    R    
Sbjct: 6   NGAFVESGKTFANINPVDGRVIARVHEAGAAEVDAAVAAARAALKGPWGKMTVAERADLL 65

Query: 98  -----EIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSG 152
                EI R+  D L  ++   G+  SL     +  G    + F D+        +    
Sbjct: 66  YAVADEIERRFDDFLAAEVADTGKPRSLASHLDIPRGAANFRVFADVV-------KNAPT 118

Query: 153 SILPSERPGHVLLENW---NPLGVVGIISAFNFPVAVYGWNAAIAL 195
                  P      N+    PLGVVG+IS +N P+ +  W    AL
Sbjct: 119 ECFEMATPDGKGALNYAVRKPLGVVGVISPWNLPLLLMTWKVGPAL 164

Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation [Energy metabolism, Other]. Length = 481

>gnl|CDD|143466 cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1

 Score = 45.9 bits (109), Expect = 2e-05
 Identities = 40/156 (25%), Positives = 64/156 (41%), Gaps = 20/156 (12%)

Query: 55  INPSTGETIASVQQGNVQDYHRCIESSRAAY---AAWAALPAPRRGEIVRQIGDALRHKL 111
           +NP   + I  V   +     + ++++ A +     W  LPA  R  I+ ++ D +  + 
Sbjct: 4   VNPFDLKPIGEVPTVDWAAIDKALDTAHALFLDRNNW--LPAHERIAILERLADLMEERA 61

Query: 112 VPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILP-------SERPGHVL 164
             L  L++ E GK L +   EV   ID  + A        G  +P       + R     
Sbjct: 62  DELALLIAREGGKPLVDAKVEVTRAIDGVELAADELGQLGGREIPMGLTPASAGRIAFTT 121

Query: 165 LENWNPLGVVGIISAFNFPVAVYGWNAAIALVGVAV 200
            E   P+GVV  ISAFN P+     N  +  V  A+
Sbjct: 122 RE---PIGVVVAISAFNHPL-----NLIVHQVAPAI 149

Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 455

>gnl|CDD|143450 cd07132, ALDH_F3AB, Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins

 Score = 45.7 bits (109), Expect = 3e-05
 Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 2/63 (3%)

Query: 263 FVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFT--KDVT 320
           ++ PT++T +  +  V+  E F PI+ +   ++LDEAI + N  ++ L+  +F+  K V 
Sbjct: 311 YIAPTVLTDVKPSDPVMQEEIFGPILPIVTVNNLDEAIEFINSREKPLALYVFSNNKKVI 370

Query: 321 NLF 323
           N  
Sbjct: 371 NKI 373

NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. Length = 443

>gnl|CDD|143457 cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like

 Score = 45.3 bits (108), Expect = 4e-05
 Identities = 25/67 (37%), Positives = 33/67 (49%)

Query: 184 VAVYGWNAAIALVGVAVQSRFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQR 243
           V+  G  AA   +      R  ++ LELGG +A IV +DADL+ A   LV A     GQ 
Sbjct: 219 VSFTGSTAAGRRIAAVCGERLARVTLELGGKSAAIVLDDADLDAAVPGLVPASLMNNGQV 278

Query: 244 CTTTRRL 250
           C    R+
Sbjct: 279 CVALTRI 285

The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. Length = 471

>gnl|CDD|143402 cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like

 Score = 45.3 bits (107), Expect = 4e-05
 Identities = 23/59 (38%), Positives = 34/59 (57%)

Query: 201 QSRFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKKKIDR 259
           Q+ F +L +E GG NAIIV+E AD  L  + +V +  G  GQ+C+   RL L +   + 
Sbjct: 260 QTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAFGFQGQKCSAASRLILTQGAYEP 318

ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. Length = 500

>gnl|CDD|143423 cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogenase, DoxF-like

 Score = 44.9 bits (107), Expect = 4e-05
 Identities = 29/117 (24%), Positives = 50/117 (42%), Gaps = 10/117 (8%)

Query: 73  DYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGE 132
           D  + +E++ AA+ AW+  P   R +I+ +  D L  +     + +  E G         
Sbjct: 1   DADQAVEAAAAAFPAWSKTPPSERRDILLKAADLLESRRDEFIEAMMEETG-----ATAA 55

Query: 133 VQEF-----IDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPV 184
              F       +   A  L     G  +PS++PG + +    P+GVV  I+ +N PV
Sbjct: 56  WAGFNVDLAAGMLREAASLITQIIGGSIPSDKPGTLAMVVKEPVGVVLGIAPWNAPV 112

Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. Length = 432

>gnl|CDD|182233 PRK10090, PRK10090, aldehyde dehydrogenase A; Provisional

 Score = 44.7 bits (106), Expect = 5e-05
 Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 3/60 (5%)

Query: 206 KLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKKKIDRPGYFVE 265
           K+ LELGG    IV +DADL+LA + +V +    +GQ C    R+++ K   D+   FV 
Sbjct: 176 KVCLELGGKAPAIVMDDADLDLAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQ---FVN 232

Length = 409

>gnl|CDD|181826 PRK09406, gabD1, succinic semialdehyde dehydrogenase; Reviewed

 Score = 44.3 bits (105), Expect = 7e-05
 Identities = 37/149 (24%), Positives = 54/149 (36%), Gaps = 32/149 (21%)

Query: 52  IPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKL 111
           I +INP+TGET+ +       +    I  + A +  +      +R        D L  + 
Sbjct: 3   IATINPATGETVKTFTALTDDEVDAAIARAHARFRDYRTTTFAQRARWANAAADLLEAEA 62

Query: 112 VPLGQLVSLEMGKILAEGIGEVQEFIDICDY-----------------AVGLSRTYSGSI 154
             +  L++LEMGK LA    E  +      Y                 AVG SR Y    
Sbjct: 63  DQVAALMTLEMGKTLASAKAEALKCAKGFRYYAEHAEALLADEPADAAAVGASRAYV--- 119

Query: 155 LPSERPGHVLLENWNPLGVVGIISAFNFP 183
                        + PLGVV  +  +NFP
Sbjct: 120 ------------RYQPLGVVLAVMPWNFP 136

Length = 457

>gnl|CDD|143420 cd07102, ALDH_EDX86601, Uncharacterized aldehyde dehydrogenase of Synechococcus sp

 Score = 44.2 bits (105), Expect = 8e-05
 Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 7/73 (9%)

Query: 197 GVAVQ----SRFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFL 252
           G A+Q     RF K+ LELGG +   V  DADL+ A + LV      +GQ C +  R+++
Sbjct: 207 GRAIQRAAAGRFIKVGLELGGKDPAYVRPDADLDAAAESLVDGAFFNSGQSCCSIERIYV 266

Query: 253 HKKKIDRPGYFVE 265
           H+   D    FVE
Sbjct: 267 HESIYDA---FVE 276

PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. Length = 452

>gnl|CDD|143409 cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1

 Score = 43.8 bits (104), Expect = 9e-05
 Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 3/57 (5%)

Query: 209 LELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKKKIDRPGYFVE 265
           LELGG + +I+ +DADL  A    + A   + GQ C+   R+F+ +   D    F E
Sbjct: 223 LELGGKSPLIIFDDADLENAVNGAMMANFLSQGQVCSNGTRVFVQRSIKDE---FTE 276

NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. Length = 457

>gnl|CDD|143451 cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehydrogenase-like

 Score = 44.0 bits (105), Expect = 1e-04
 Identities = 16/35 (45%), Positives = 23/35 (65%)

Query: 266 PTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAI 300
           PT+V  +  + RV+  E F PI+ +  +DSLDEAI
Sbjct: 322 PTLVLNVTDDMRVMQEEIFGPILPILTYDSLDEAI 356

Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. Length = 434

>gnl|CDD|233324 TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carboxylate dehydrogenase, group 1

 Score = 43.6 bits (103), Expect = 1e-04
 Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 10/113 (8%)

Query: 258 DRPGYFVEPTIVTGLPHNSRVVHRETFAPI--VYVFPFDSLDEAITW--NNEVKQGLSSS 313
           D  GYFVEPT+V        ++  E F P+  VYV+P D   E I    ++    GL+ +
Sbjct: 392 DSVGYFVEPTVVESKDPQEPLMKEEIFGPVLTVYVYPDDKYKE-ILDLVDSTTSYGLTGA 450

Query: 314 IFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSD 366
           +F KD   + +         G   +N    GA +     G++  GG R SG++
Sbjct: 451 VFAKDRDAILEADKVLRFAAGNFYINDKPTGAVV-----GQQPFGGARASGTN 498

This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate [Energy metabolism, Amino acids and amines]. Length = 532

>gnl|CDD|215110 PLN00412, PLN00412, NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional

 Score = 43.2 bits (102), Expect = 2e-04
 Identities = 23/51 (45%), Positives = 32/51 (62%), Gaps = 2/51 (3%)

Query: 197 GVAVQSRFG--KLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCT 245
           G+A+  + G   L +ELGG +A IV EDADL+LA   ++      +GQRCT
Sbjct: 249 GIAISKKAGMVPLQMELGGKDACIVLEDADLDLAAANIIKGGFSYSGQRCT 299

Length = 496

>gnl|CDD|132284 TIGR03240, arg_catab_astD, succinylglutamic semialdehyde dehydrogenase

 Score = 42.8 bits (101), Expect = 2e-04
 Identities = 32/103 (31%), Positives = 48/103 (46%), Gaps = 7/103 (6%)

Query: 263 FVEPTI--VTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVT 320
            + P I  VTG+   + +   E F P++ V  +D  DEAI   N  + GLS+ + + D  
Sbjct: 355 LLTPGIIDVTGV---AELPDEEHFGPLLQVIRYDDFDEAIAIANNTRFGLSAGLLSDDRE 411

Query: 321 NLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRES 363
              ++L       G++N N P  GA     FGG   +G  R S
Sbjct: 412 LYDRFL--LEIRAGIVNWNKPLTGASSAAPFGGIGASGNHRPS 452

Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism [Energy metabolism, Amino acids and amines]. Length = 484

>gnl|CDD|184426 PRK13968, PRK13968, putative succinate semialdehyde dehydrogenase; Provisional

 Score = 42.5 bits (100), Expect = 3e-04
 Identities = 37/130 (28%), Positives = 59/130 (45%), Gaps = 5/130 (3%)

Query: 249 RLFLHKKKIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQ 308
           RL L  +KI   G +  PT++  +         E F P+  +      + A+   N+ + 
Sbjct: 332 RLLLGGEKIAGAGNYYAPTVLANVTPEMTAFREELFGPVAAITVAKDAEHALELANDSEF 391

Query: 309 GLSSSIFTKDVTNLFKWLGPQGSDCGLINVN-IPTNGAEIGGAFGGEKYTGGGRESGSDS 367
           GLS++IFT D T   +       +CG + +N    + A +  AFGG K +G GRE     
Sbjct: 392 GLSATIFTTDETQARQM--AARLECGGVFINGYCASDARV--AFGGVKKSGFGRELSHFG 447

Query: 368 WKQYCRRSTV 377
             ++C   TV
Sbjct: 448 LHEFCNIQTV 457

Length = 462

>gnl|CDD|143462 cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like

 Score = 42.0 bits (99), Expect = 4e-04
 Identities = 36/112 (32%), Positives = 48/112 (42%), Gaps = 22/112 (19%)

Query: 170 PLGVVGIISAFNFPVAVYGWNAA-------IAL-----VGVAVQSRFGKLL----LELGG 213
           P GVV II  +    AV G   A       IA       G  V     + L    LE GG
Sbjct: 200 PPGVVNIIPGYG---AVAGSALAEHPDVDKIAFTGSTATGRLVMKAAAQNLKAVTLECGG 256

Query: 214 NNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKKKIDRPGYFVE 265
            +  +V EDADL+ A +         +GQ CT T R+++ +   D+   FVE
Sbjct: 257 KSPALVFEDADLDQAVKWAAAGIMYNSGQNCTATSRIYVQESIYDK---FVE 305

NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. Length = 484

>gnl|CDD|143441 cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17

 Score = 42.2 bits (100), Expect = 4e-04
 Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 3/64 (4%)

Query: 258 DRPGYFVEPTIVTGLPHNSRVVHRETFAPI--VYVFPFDSLDEAI-TWNNEVKQGLSSSI 314
           D  GYFVEPT++       +++  E F P+  VYV+P    +E +   +      L+ +I
Sbjct: 392 DSVGYFVEPTVIETTDPKHKLMTEEIFGPVLTVYVYPDSDFEETLELVDTTSPYALTGAI 451

Query: 315 FTKD 318
           F +D
Sbjct: 452 FAQD 455

Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. Length = 522

>gnl|CDD|143416 cd07098, ALDH_F15-22, Aldehyde dehydrogenase family 15A1 and 22A1-like

 Score = 41.9 bits (99), Expect = 5e-04
 Identities = 18/53 (33%), Positives = 31/53 (58%)

Query: 207 LLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKKKIDR 259
           ++LELGG +  IV +DADL+     ++     ++GQ C    R+ +H+K  D+
Sbjct: 229 VVLELGGKDPAIVLDDADLDQIASIIMRGTFQSSGQNCIGIERVIVHEKIYDK 281

Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. Length = 465

>gnl|CDD|233324 TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carboxylate dehydrogenase, group 1

 Score = 41.7 bits (98), Expect = 5e-04
 Identities = 47/175 (26%), Positives = 66/175 (37%), Gaps = 19/175 (10%)

Query: 37  PGVYDGTSWKANGEIIPSINPST-GETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPR 95
           P V  G     +GE I  ++P      +A       +  ++ +E++  A   W+ LP   
Sbjct: 33  PLVIGGEEVWTSGERIYQVSPHNHQAVLAKATNATEELANKAVEAALDAKKEWSLLPFYD 92

Query: 96  RGEIVRQIGDAL----RHKLVP---LGQLVSLEMGK--ILAEGIGEVQEFIDICDYAVGL 146
           R  I  +  D L    R +++    LGQ       K    AE I  V E ID   +    
Sbjct: 93  RAAIFLKAADLLSGPYRAEILAATMLGQ------SKTVYQAE-IDAVAELIDFFRFNAKY 145

Query: 147 SRTYSGSILPSERPGHVLLENWNPL-GVVGIISAFNFPVAVYGWNAAIALVGVAV 200
           +R       P   PG      + PL G V  IS FNF         A AL+G  V
Sbjct: 146 ARELYEQ-QPISAPGEWNRTEYRPLEGFVYAISPFNFTAIAGNLAGAPALMGNTV 199

This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate [Energy metabolism, Amino acids and amines]. Length = 532

>gnl|CDD|143451 cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehydrogenase-like

 Score = 40.9 bits (97), Expect = 8e-04
 Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%)

Query: 209 LELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKKKIDRPGYFVE 265
           LELGG +  I+  DADL  A + + F     AGQ C     + + + K++    FV 
Sbjct: 206 LELGGKSPAIIAPDADLAKAAERIAFGKLLNAGQTCVAPDYVLVPEDKLEE---FVA 259

Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. Length = 434

>gnl|CDD|143426 cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like

 Score = 40.8 bits (96), Expect = 9e-04
 Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 1/51 (1%)

Query: 209 LELGGNNAIIVNEDADLNLAQQCLVFACCGT-AGQRCTTTRRLFLHKKKID 258
           LELGG + +IV  DADL+ A    +     T  GQ CT   RLF+H+   D
Sbjct: 224 LELGGKSPMIVFPDADLDDAVDGAIAGMRFTRQGQSCTAGSRLFVHEDIYD 274

NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. Length = 457

>gnl|CDD|183918 PRK13252, PRK13252, betaine aldehyde dehydrogenase; Provisional

 Score = 39.5 bits (93), Expect = 0.002
 Identities = 19/47 (40%), Positives = 29/47 (61%)

Query: 209 LELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK 255
           +ELGG + +IV +DADL+ A    + A   ++GQ CT   R+F+ K 
Sbjct: 249 MELGGKSPLIVFDDADLDRAADIAMLANFYSSGQVCTNGTRVFVQKS 295

Length = 488

>gnl|CDD|143430 cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like

 Score = 39.9 bits (94), Expect = 0.002
 Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 4/68 (5%)

Query: 199 AVQSRFGKLLLELGGNNAIIVNEDA-DLNLAQQCLVFACCGTAGQRCTTTRRLFLHKKKI 257
           + QS   ++ LE GG +  IV  DA DL+ A +          G+ C+   RL +H+   
Sbjct: 223 SGQSNLKRVWLECGGKSPNIVFADAPDLDAAAEAAAAGIFWNQGEVCSAGSRLLVHESIK 282

Query: 258 DRPGYFVE 265
           D    F+E
Sbjct: 283 DE---FLE 287

NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. Length = 462

>gnl|CDD|215110 PLN00412, PLN00412, NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional

 Score = 39.7 bits (93), Expect = 0.002
 Identities = 17/61 (27%), Positives = 31/61 (50%)

Query: 259 RPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKD 318
           R G  + P ++  +  + R+   E F P++ V   +S++E I   N    GL   +FT+D
Sbjct: 368 REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRD 427

Query: 319 V 319
           +
Sbjct: 428 I 428

Length = 496

>gnl|CDD|181873 PRK09457, astD, succinylglutamic semialdehyde dehydrogenase; Reviewed

 Score = 39.9 bits (94), Expect = 0.002
 Identities = 32/103 (31%), Positives = 49/103 (47%), Gaps = 7/103 (6%)

Query: 263 FVEPTI--VTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVT 320
            + P I  VTG+   + +   E F P++ V  +D  DEAI   N  + GLS+ + + D  
Sbjct: 357 LLTPGIIDVTGV---AELPDEEYFGPLLQVVRYDDFDEAIRLANNTRFGLSAGLLSDDRE 413

Query: 321 NLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRES 363
           +  ++L       G++N N P  GA     FGG   +G  R S
Sbjct: 414 DYDQFL--LEIRAGIVNWNKPLTGASSAAPFGGVGASGNHRPS 454

Length = 487

>gnl|CDD|183050 PRK11241, gabD, succinate-semialdehyde dehydrogenase I; Provisional

 Score = 39.1 bits (91), Expect = 0.003
 Identities = 22/54 (40%), Positives = 30/54 (55%)

Query: 206 KLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKKKIDR 259
           K+ LELGGN   IV +DADL+ A +  + +    AGQ C    RL++     DR
Sbjct: 251 KVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDR 304

Length = 482

>gnl|CDD|181826 PRK09406, gabD1, succinic semialdehyde dehydrogenase; Reviewed

 Score = 39.0 bits (91), Expect = 0.003
 Identities = 19/48 (39%), Positives = 26/48 (54%)

Query: 206 KLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLH 253
           K +LELGG++  IV   ADL+ A +  V A     GQ C   +R  +H
Sbjct: 227 KTVLELGGSDPFIVMPSADLDRAAETAVTARVQNNGQSCIAAKRFIVH 274

Length = 457

>gnl|CDD|143416 cd07098, ALDH_F15-22, Aldehyde dehydrogenase family 15A1 and 22A1-like

 Score = 39.2 bits (92), Expect = 0.003
 Identities = 34/136 (25%), Positives = 66/136 (48%), Gaps = 12/136 (8%)

Query: 56  NPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGD-ALRHKLVPL 114
           +P+TG+ + SV     +D    I ++RAA   WA      R +++R +    L ++   +
Sbjct: 2   DPATGQHLGSVPADTPEDVDEAIAAARAAQREWAKTSFAERRKVLRSLLKYILENQEE-I 60

Query: 115 GQLVSLEMGKILAEG-IGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLE------N 167
            ++   + GK + +  +GE+   +  C+      +    ++ P  RPG +L+        
Sbjct: 61  CRVACRDTGKTMVDASLGEI---LVTCEKIRWTLKHGEKALRPESRPGGLLMFYKRARVE 117

Query: 168 WNPLGVVGIISAFNFP 183
           + PLGVVG I ++N+P
Sbjct: 118 YEPLGVVGAIVSWNYP 133

Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. Length = 465

>gnl|CDD|143406 cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins

 Score = 39.4 bits (93), Expect = 0.003
 Identities = 15/36 (41%), Positives = 23/36 (63%)

Query: 209 LELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRC 244
           LELGG +  IV++DA+L +A + + +     AGQ C
Sbjct: 205 LELGGKSPCIVDKDANLEVAARRIAWGKFLNAGQTC 240

ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. Length = 426

>gnl|CDD|143403 cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like

 Score = 38.8 bits (90), Expect = 0.004
 Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 3/62 (4%)

Query: 203 RFGKLLLELGGNNAIIVNEDADL--NLAQQCLVFACCGTAGQRCTTTRRLFLHKKKIDRP 260
           +  ++ LEL G N  ++  DA     +A QC V      +GQ+CT    LF+ +     P
Sbjct: 200 KQARIYLELAGFNWKVLGPDAQAVDYVAWQC-VQDMTACSGQKCTAQSMLFVPENWSKTP 258

Query: 261 GY 262
             
Sbjct: 259 LV 260

ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. Length = 442

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	394
PLN02315	508	aldehyde dehydrogenase family 7 member	100.0
KOG2450|consensus	501		100.0
KOG2451|consensus	503		100.0
PLN02419	604	methylmalonate-semialdehyde dehydrogenase [acylati	100.0
PRK11241	482	gabD succinate-semialdehyde dehydrogenase I; Provi	100.0
COG1012	472	PutA NAD-dependent aldehyde dehydrogenases [Energy	100.0
TIGR03374	472	ABALDH 1-pyrroline dehydrogenase. Members of this	100.0
PLN02278	498	succinic semialdehyde dehydrogenase	100.0
cd07130	474	ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic se	100.0
PLN02466	538	aldehyde dehydrogenase family 2 member	100.0
cd07117	475	ALDH_StaphAldA1 Uncharacterized Staphylococcus aur	100.0
PLN02766	501	coniferyl-aldehyde dehydrogenase	100.0
cd07086	478	ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadip	100.0
cd07140	486	ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydroge	100.0
cd07559	480	ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dep	100.0
cd07113	477	ALDH_PADH_NahF Escherichia coli NAD+-dependent phe	100.0
cd07097	473	ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent	100.0
PRK13252	488	betaine aldehyde dehydrogenase; Provisional	100.0
cd07142	476	ALDH_F2BC Arabidosis aldehyde dehydrogenase family	100.0
cd07085	478	ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrog	100.0
TIGR03216	481	OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehy	100.0
PRK09457	487	astD succinylglutamic semialdehyde dehydrogenase;	100.0
PLN02467	503	betaine aldehyde dehydrogenase	100.0
PLN00412	496	NADP-dependent glyceraldehyde-3-phosphate dehydrog	100.0
TIGR02299	488	HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyd	100.0
PRK13473	475	gamma-aminobutyraldehyde dehydrogenase; Provisiona	100.0
cd07116	479	ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependen	100.0
cd07124	512	ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxyl	100.0
TIGR01237	511	D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehy	100.0
TIGR03240	484	arg_catab_astD succinylglutamic semialdehyde dehyd	100.0
PRK13968	462	putative succinate semialdehyde dehydrogenase; Pro	100.0
cd07151	465	ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyd	100.0
PRK03137	514	1-pyrroline-5-carboxylate dehydrogenase; Provision	100.0
cd07143	481	ALDH_AldA_AN0554 Aspergillus nidulans aldehyde deh	100.0
cd07141	481	ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydro	100.0
cd07144	484	ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyd	100.0
cd07131	478	ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuen	100.0
PRK09847	494	gamma-glutamyl-gamma-aminobutyraldehyde dehydrogen	100.0
TIGR01722	477	MMSDH methylmalonic acid semialdehyde dehydrogenas	100.0
cd07119	482	ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent be	100.0
cd07123	522	ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate	100.0
PRK09406	457	gabD1 succinic semialdehyde dehydrogenase; Reviewe	100.0
TIGR01804	467	BADH glycine betaine aldehyde dehydrogenase. Betai	100.0
TIGR03250	472	PhnAcAld_DH putative phosphonoacetaldehyde dehydro	100.0
cd07088	468	ALDH_LactADH-AldA Escherichia coli lactaldehyde de	100.0
cd07091	476	ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families	100.0
TIGR01236	533	D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehy	100.0
cd07083	500	ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-	100.0
cd07139	471	ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehy	100.0
PRK09407	524	gabD2 succinic semialdehyde dehydrogenase; Reviewe	100.0
cd07128	513	ALDH_MaoC-N N-terminal domain of the monoamine oxi	100.0
cd07138	466	ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric ac	100.0
cd07150	451	ALDH_VaniDH_like Pseudomonas putida vanillin dehyd	100.0
cd07107	456	ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde	100.0
cd07125	518	ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate d	100.0
cd07145	456	ALDH_LactADH_F420-Bios Methanocaldococcus jannasch	100.0
cd07111	480	ALDH_F16 Aldehyde dehydrogenase family 16A1-like.	100.0
cd07082	473	ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylat	100.0
TIGR01780	448	SSADH succinate-semialdehyde dehydrogenase. SSADH	100.0
cd07094	453	ALDH_F21_LactADH-like ALDH subfamily: NAD+-depende	100.0
TIGR02278	663	PaaN-DH phenylacetic acid degradation protein paaN	100.0
PRK11903	521	aldehyde dehydrogenase; Provisional	100.0
PLN02174	484	aldehyde dehydrogenase family 3 member H1	100.0
cd07147	452	ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1	100.0
cd07148	455	ALDH_RL0313 Uncharacterized ALDH ( RL0313) with si	100.0
cd07101	454	ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succi	100.0
cd07090	457	ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobuty	100.0
cd07120	455	ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde deh	100.0
cd07106	446	ALDH_AldA-AAD23400 Streptomyces aureofaciens putat	100.0
cd07109	454	ALDH_AAS00426 Uncharacterized Saccharopolyspora sp	100.0
cd07118	454	ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydr	100.0
cd07089	459	ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric	100.0
cd07110	456	ALDH_F10_BADH Arabidopsis betaine aldehyde dehydro	100.0
PF00171	462	Aldedh: Aldehyde dehydrogenase family; InterPro: I	100.0
cd07102	452	ALDH_EDX86601 Uncharacterized aldehyde dehydrogena	100.0
TIGR01238	500	D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehy	100.0
cd07115	453	ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxy	100.0
cd07108	457	ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent a	100.0
PRK11563	675	bifunctional aldehyde dehydrogenase/enoyl-CoA hydr	100.0
cd07112	462	ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent	100.0
cd07092	450	ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent g	100.0
cd07099	453	ALDH_DDALDH Methylomonas sp. 4,4'-diapolycopene-di	100.0
cd07146	451	ALDH_PhpJ Streptomyces putative phosphonoformaldeh	100.0
cd07152	443	ALDH_BenzADH NAD-dependent benzaldehyde dehydrogen	100.0
cd07149	453	ALDH_y4uC Uncharacterized ALDH (y4uC) with similar	100.0
cd07114	457	ALDH_DhaS Uncharacterized Candidatus pelagibacter	100.0
cd07126	489	ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate de	100.0
cd07103	451	ALDH_F5_SSADH_GabD Mitochondrial succinate-semiald	100.0
PTZ00381	493	aldehyde dehydrogenase family protein; Provisional	100.0
cd07098	465	ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and	100.0
PLN02203	484	aldehyde dehydrogenase	100.0
cd07093	455	ALDH_F8_HMSADH Human aldehyde dehydrogenase family	100.0
cd07100	429	ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succi	100.0
cd07136	449	ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydr	100.0
cd07135	436	ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde	100.0
cd07105	432	ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-l	100.0
cd07095	431	ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde	100.0
PRK11904	1038	bifunctional proline dehydrogenase/pyrroline-5-car	100.0
cd07132	443	ALDH_F3AB Aldehyde dehydrogenase family 3 members	100.0
cd07104	431	ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependen	100.0
cd07137	432	ALDH_F3FHI Plant aldehyde dehydrogenase family 3 m	100.0
cd07133	434	ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-l	100.0
KOG2452|consensus	881		100.0
cd07134	433	ALDH_AlkH-like Pseudomonas putida Aldehyde dehydro	100.0
cd07087	426	ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl	100.0
KOG2453|consensus	507		100.0
PRK11905	1208	bifunctional proline dehydrogenase/pyrroline-5-car	100.0
PRK10090	409	aldehyde dehydrogenase A; Provisional	100.0
PRK11809	1318	putA trifunctional transcriptional regulator/proli	100.0
KOG2454|consensus	583		100.0
cd07121	429	ALDH_EutE Ethanolamine utilization protein EutE-li	100.0
KOG2456|consensus	477		100.0
cd07129	454	ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydr	100.0
cd07084	442	ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent	100.0
PLN02418	718	delta-1-pyrroline-5-carboxylate synthase	100.0
PRK00197	417	proA gamma-glutamyl phosphate reductase; Provision	100.0
PRK15398	465	aldehyde dehydrogenase EutE; Provisional	100.0
cd07081	439	ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldeh	100.0
TIGR02288	551	PaaN_2 phenylacetic acid degradation protein paaN.	100.0
cd07078	432	ALDH NAD(P)+ dependent aldehyde dehydrogenase fami	100.0
cd07079	406	ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate redu	100.0
cd07127	549	ALDH_PAD-PaaZ Phenylacetic acid degradation protei	100.0
PRK13805	862	bifunctional acetaldehyde-CoA/alcohol dehydrogenas	100.0
cd07122	436	ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydr	100.0
TIGR01092	715	P5CS delta l-pyrroline-5-carboxylate synthetase. T	100.0
cd06534	367	ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase s	100.0
cd07077	397	ALDH-like NAD(P)+-dependent aldehyde dehydrogenase	100.0
COG4230	769	Delta 1-pyrroline-5-carboxylate dehydrogenase [Ene	100.0
TIGR02518	488	EutH_ACDH acetaldehyde dehydrogenase (acetylating)	100.0
TIGR00407	398	proA gamma-glutamyl phosphate reductase. The prosi	100.0
KOG2455|consensus	561		100.0
COG0014	417	ProA Gamma-glutamyl phosphate reductase [Amino aci	99.94
KOG4165|consensus	433		99.85
cd07080	422	ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC. Ac	99.81
KOG2449|consensus	157		99.46
PF05893	399	LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR0086	98.3
PF07368	215	DUF1487: Protein of unknown function (DUF1487); In	98.27
PF00815	412	Histidinol_dh: Histidinol dehydrogenase; InterPro:	94.64
PRK00877	425	hisD bifunctional histidinal dehydrogenase/ histid	91.01
PRK12447	426	histidinol dehydrogenase; Reviewed	89.73
PLN02926	431	histidinol dehydrogenase	89.54
cd06572	390	Histidinol_dh Histidinol dehydrogenase, HisD, E.C	89.23
TIGR00069	393	hisD histidinol dehydrogenase. This model describe	88.53
COG0141	425	HisD Histidinol dehydrogenase [Amino acid transpor	87.15

>PLN02315 aldehyde dehydrogenase family 7 member

Probab=100.00  E-value=1.9e-79  Score=625.72  Aligned_cols=372  Identities=64%  Similarity=1.087  Sum_probs=341.3

Q ss_pred             CcchhhhhcCCCCCCCCCceeCCeeccCCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHH
Q psy3652          21 SKYPFLKELGLSGSVNPGVYDGTSWKANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIV  100 (394)
Q Consensus        21 ~~~~~~~~~~~~~~~~~~~~i~G~~~~~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L  100 (394)
                      ++|++|.+.... ++..++||||+|+.++.+++++||.||+++++++.++.+|+++|+++|++||+.|+++|.++|.++|
T Consensus         6 ~~~~~~~~~~~~-~~~~~~~I~G~~~~~~~~~~~~nP~t~~~i~~~~~a~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L   84 (508)
T PLN02315          6 KEYEFLSEIGLS-SRNLGCYVGGEWRANGPLVSSVNPANNQPIAEVVEASLEDYEEGLRACEEAAKIWMQVPAPKRGEIV   84 (508)
T ss_pred             HHHHHHHHHhcC-ccccCceECCEEecCCCeeeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHH
Confidence            467888887766 8889999999998667889999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhCHHHHHHHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccC
Q psy3652         101 RQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAF  180 (394)
Q Consensus       101 ~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~  180 (394)
                      ++++++|++++++|++++++|+|||..+++.|+..+++.++|+++.++.+.++..+...++...+..++|+|||++|+||
T Consensus        85 ~~~a~~l~~~~~~la~~~~~e~GK~~~~a~~ev~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~P~GVV~~I~Pw  164 (508)
T PLN02315         85 RQIGDALRAKLDYLGRLVSLEMGKILAEGIGEVQEIIDMCDFAVGLSRQLNGSIIPSERPNHMMMEVWNPLGIVGVITAF  164 (508)
T ss_pred             HHHHHHHHhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecceEEEEECCC
Confidence            99999999999999999999999999999999999999999999988887766555433344556789999999999999


Q ss_pred             CchhHhHHHHHHHHh-----------------------------------------------------------------
Q psy3652         181 NFPVAVYGWNAAIAL-----------------------------------------------------------------  195 (394)
Q Consensus       181 N~P~~~~~~~~~~aL-----------------------------------------------------------------  195 (394)
                      |||+.++++++++||                                                                 
T Consensus       165 N~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~~~~l~~~~~~~aGlP~gvv~~v~g~~~~~~~l~~~~~v~~v~fTG  244 (508)
T PLN02315        165 NFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAMTKLVAEVLEKNNLPGAIFTSFCGGAEIGEAIAKDTRIPLVSFTG  244 (508)
T ss_pred             cchHHHHHHHHhHHHHcCCEEEeeCCCcChHHHHHHHHHHHHHHHHcCCCcccEEEecCChHHHHHHhcCCCCCEEEEEC
Confidence            999999999999999                                                                 


Q ss_pred             ---hHHHHHh----hhhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc-------------
Q psy3652         196 ---VGVAVQS----RFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK-------------  255 (394)
Q Consensus       196 ---~g~~i~~----~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~-------------  255 (394)
                         +|+.|++    +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++             
T Consensus       245 S~~~G~~v~~~aa~~~~~~~lElgGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~  324 (508)
T PLN02315        245 SSKVGLMVQQTVNARFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLLLHESIYDDVLEQLLTVY  324 (508)
T ss_pred             CHHHHHHHHHHHHhcCCCEEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeHHHHHHHHHHHHHHH
Confidence               6777765    45799999999999999999999999999999999999999999999999999             


Q ss_pred             ----------------------------------------------cCCCCCceecCeEEEcCCCCCcccccccccceEE
Q psy3652         256 ----------------------------------------------KIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVY  289 (394)
Q Consensus       256 ----------------------------------------------~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~  289 (394)
                                                                    ..+..|+|+.|||+ +++++|++++||+||||++
T Consensus       325 ~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~g~~~~Ptvl-~v~~~~~i~~eE~FGPVl~  403 (508)
T PLN02315        325 KQVKIGDPLEKGTLLGPLHTPESKKNFEKGIEIIKSQGGKILTGGSAIESEGNFVQPTIV-EISPDADVVKEELFGPVLY  403 (508)
T ss_pred             HhcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCeEEecEEE-ecCCCChHHhCCCcCCEEE
Confidence                                                          01124889999999 6999999999999999999


Q ss_pred             EEeeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHH
Q psy3652         290 VFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWK  369 (394)
Q Consensus       290 v~~~~~~~eAi~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~  369 (394)
                      |++|+|+||||+++|+++|||+++|||+|.+.+++++++.++++|+||||.++....+.+||||+|.||+|+++|.++++
T Consensus       404 V~~~~~~deai~~aN~~~~gL~a~Vft~d~~~a~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~G~~~l~  483 (508)
T PLN02315        404 VMKFKTLEEAIEINNSVPQGLSSSIFTRNPETIFKWIGPLGSDCGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWK  483 (508)
T ss_pred             EEEeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHhhhcccceeEEEEcCCCCCCCCCCCCCccccccCCccchHHHHH
Confidence            99999999999999999999999999999999999984447999999999865555677899999999999999999999


Q ss_pred             hhhheeEEEEecCCcccccccccCC
Q psy3652         370 QYCRRSTVTINHGKEITLAQGIKFE  394 (394)
Q Consensus       370 ~f~~~k~v~~~~~~~~~~~~~~~~~  394 (394)
                      +|++.|+++++++..+|++|+++|+
T Consensus       484 ~ft~~k~v~~~~~~~~~~~~~~~~~  508 (508)
T PLN02315        484 QYMRRSTCTINYGNELPLAQGINFG  508 (508)
T ss_pred             HHhhEEEEEEecCCCCCcccCCCCC
Confidence            9999999999987888999999996

>KOG2450|consensus

Probab=100.00  E-value=2.5e-80  Score=601.70  Aligned_cols=344  Identities=31%  Similarity=0.557  Sum_probs=323.6

Q ss_pred             CCceeCCeec--cCCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHH--HhhcCChhhHHHHHHHHHHHHhhCHH
Q psy3652          37 PGVYDGTSWK--ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYA--AWAALPAPRRGEIVRQIGDALRHKLV  112 (394)
Q Consensus        37 ~~~~i~G~~~--~~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~  112 (394)
                      .++||||+|.  .+++++++.||.||+++++|+.++.+||+.||++||+||+  .|++++..+|.++|+++|++++++++
T Consensus        21 ~~lfin~e~~~~~s~kt~~~~nP~tg~~i~~v~~~~~~dVd~aV~aAr~Af~~~~W~~~~~~~R~~~L~~~Adlie~~~~  100 (501)
T KOG2450|consen   21 LGLFINGEFVDSVSGKTFPVVNPATGEVIAKVAEATEEDVDEAVKAARSAFKLVDWAKRDAAERGRLLRKLADLIEQDAD  100 (501)
T ss_pred             hheeecCeeecccCCceeeeecCCCCCeEEEeccccHHHHHHHHHHHHHhcCcCccccCCHHHHHHHHHHHHHHHHhhhH
Confidence            3799999997  4779999999999999999999999999999999999999  69999999999999999999999999


Q ss_pred             HHHHHHHHHcCCChHHhH-HHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHH
Q psy3652         113 PLGQLVSLEMGKILAEGI-GEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNA  191 (394)
Q Consensus       113 ~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~  191 (394)
                      .|+.+.+.|.|||+.+++ .++..+++.++||+++++...+...+.. .....+++++|+|||+.|+|||||+.+.+|++
T Consensus       101 ~lA~~E~~d~GKp~~~a~~~Dl~~~~~~~ry~ag~ad~~~~~~~~~~-~~~~~yt~~eP~GV~G~I~pWN~Pllm~awKl  179 (501)
T KOG2450|consen  101 VLAALEVLDNGKPYPEALVSDLPPAIDCFRYYAGWADKIHGSTIPTD-GEFFAYTRREPIGVCGQIIPWNFPLLMQAWKL  179 (501)
T ss_pred             HHhhhcccccCCcchhhhhcCchhhhhHHHhhccchhhcccccCCCC-CceEEEecCCcceeeeEeccCchHHHHHHHhh
Confidence            999999999999999998 8999999999999999998876665543 45678999999999999999999999999999


Q ss_pred             HHHh-----------------------------------------------------------------hHHHHHh----
Q psy3652         192 AIAL-----------------------------------------------------------------VGVAVQS----  202 (394)
Q Consensus       192 ~~aL-----------------------------------------------------------------~g~~i~~----  202 (394)
                      +|||                                                                 +|+.|++    
T Consensus       180 aPALa~GNtvV~Kpae~tplsal~~~~l~~eaG~P~GVvNii~G~G~~aG~al~sH~dv~kiaFTGSt~~G~~I~~aaa~  259 (501)
T KOG2450|consen  180 APALAAGNTVVLKPAEQTPLTALYLASLCKEAGFPPGVVNIVPGSGTTAGAALASHPDVDKVAFTGSTPVGKEIMEAAAE  259 (501)
T ss_pred             hhHHhhCcEEEecCCCCCCchHHHHHHHhHHhcCCcceEEEccCCCchHHHHHhhCCCCceEEecCCCcchhHHhhhhhh
Confidence            9999                                                                 7888875    


Q ss_pred             -hhhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc--------------------------
Q psy3652         203 -RFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK--------------------------  255 (394)
Q Consensus       203 -~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~--------------------------  255 (394)
                       ++||++||||||+|.||++|||++.|++.++.+.|+|+||.|++.+|+|||++                          
T Consensus       260 ~n~K~vtLElGGKsp~Ivf~Dadld~av~~~~~~iF~nqGq~C~a~sR~~Vqe~iydefv~~~v~~a~~~~kvGdP~~~~  339 (501)
T KOG2450|consen  260 SNLKPVTLELGGKSPIIVFDDADLDLAVENAAFGIFFNQGQCCTAGSRVFVQESIYDEFVEKFVAAAKKKLKVGDPFDEG  339 (501)
T ss_pred             cCCceeccccCCCCcceEecccchHHHHHHHHHHhhcccccccccCceeEEechHHHHHHHHHHHHHhcccccCCCCCcc
Confidence             46899999999999999999999999999999999999999999999999999                          


Q ss_pred             ----------------------------------cCCCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHH
Q psy3652         256 ----------------------------------KIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAIT  301 (394)
Q Consensus       256 ----------------------------------~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~  301 (394)
                                                        .....|+|+.|||+.+++++|.+++||+||||++|++|++.||+|+
T Consensus       340 ~~qG~~i~~~q~ekI~~yi~~~k~eGa~l~~gG~~~g~~Gyfi~Ptv~~~v~~~m~i~~EEIFGPVv~v~~F~t~eE~i~  419 (501)
T KOG2450|consen  340 TEQGPQISKTQYEKILGYIESGKKEGATLLCGGVRLGDKGYFIKPTVFTNVTDDMRIAKEEIFGPVVVVLKFKTEEEVIE  419 (501)
T ss_pred             cccccccCHHHHHHHHHHHHHHHhcCCEEEecCcccCCCceEECCeeccCCChhhhhhHhhccCceEEEEecCcHHHHHH
Confidence                                              1234699999999999999999999999999999999999999999


Q ss_pred             HHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEEec
Q psy3652         302 WNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTINH  381 (394)
Q Consensus       302 ~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~~~  381 (394)
                      ++|++.|||+++|||+|.+++++++  ..+++|+||||+.. ..+..+||||+|+||+||+.|.+++++|++.|+++++.
T Consensus       420 ~AN~t~yGLAa~V~t~dl~~a~~va--~~l~aGtVwiN~y~-~~~~~~PfgG~K~SG~GRE~g~~~l~~ytevKtv~v~~  496 (501)
T KOG2450|consen  420 RANNTTYGLAAGVFTKDLDKAHRVA--NALQAGTVWINCYN-VFDAQVPFGGFKMSGIGRELGEYGLEAYTEVKTVTVKL  496 (501)
T ss_pred             HhcCCcccceeeEeccChHHHHHHH--HHhcCceEEEeccc-cccccCCccccccccCCccccHHHHhhcceeeEEEEeC
Confidence            9999999999999999999999999  88999999999864 45678999999999999999999999999999999997


Q ss_pred             CCc
Q psy3652         382 GKE  384 (394)
Q Consensus       382 ~~~  384 (394)
                      +..
T Consensus       497 ~~~  499 (501)
T KOG2450|consen  497 PQK  499 (501)
T ss_pred             CCC
Confidence            653

>KOG2451|consensus

Probab=100.00  E-value=1e-79  Score=573.20  Aligned_cols=343  Identities=30%  Similarity=0.508  Sum_probs=324.7

Q ss_pred             CCCceeCCeecc--CCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHH
Q psy3652          36 NPGVYDGTSWKA--NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVP  113 (394)
Q Consensus        36 ~~~~~i~G~~~~--~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~  113 (394)
                      ..+-||+|+|+.  ++++|+|.||++|++|+.|+..+.+|.++||++|.+||++|+.++..+|.++|+++.++|.+|+|+
T Consensus        23 ~~~~~igGkWv~s~~~~tF~V~nPa~geii~~V~~~~V~e~~kAI~aA~EaF~s~~~~takeRs~lLrkwy~Li~en~dd  102 (503)
T KOG2451|consen   23 RAQSYIGGKWVDSPDNKTFEVDNPANGEIIGKVADMTVEEAEKAIDAAYEAFKSYRNLTAKERSALLRKWYELIMENKDD  102 (503)
T ss_pred             chhccccceeeccCCCCeeeccCCCccchhhcccCCcHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhchHH
Confidence            567899999984  678999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHH
Q psy3652         114 LGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAI  193 (394)
Q Consensus       114 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~  193 (394)
                      |++++++|.|||+.||++|+.....+++||++.++++.|+..+...++...++.++|+||+++|+|||||.++..++..+
T Consensus       103 La~iiTlE~GKpL~eA~gEv~y~a~f~eWyAeEA~RvyGdii~s~~~~rr~i~ikQPvGV~alItPWNFP~AMItRK~gA  182 (503)
T KOG2451|consen  103 LATIITLENGKPLGEAKGEVAYSAAFFEWYAEEARRVYGDIIPSLNPNRRLIVIKQPVGVVALITPWNFPAAMITRKAGA  182 (503)
T ss_pred             HHHHHhhhcCCchhhccceeehhHHHHHHHHHHhhhhhccccCCCCCCceEEEEeccceeEEEecCcCChHHHHHhHHHH
Confidence            99999999999999999999999999999999999999999988888888899999999999999999999999999999


Q ss_pred             Hh--------------------------------------------------------------------hHHHHHh---
Q psy3652         194 AL--------------------------------------------------------------------VGVAVQS---  202 (394)
Q Consensus       194 aL--------------------------------------------------------------------~g~~i~~---  202 (394)
                      ||                                                                    +||.+++   
T Consensus       183 ALAaGCTvVvkPs~~TPlsaLala~lA~~AGiP~Gv~NVit~~~~~a~eig~~lctsp~VrkisFTGST~VGKiL~~qsa  262 (503)
T KOG2451|consen  183 ALAAGCTVVVKPSEDTPLSALALAKLAEEAGIPAGVLNVITADASNAAEIGKELCTSPDVRKISFTGSTNVGKILMAQSA  262 (503)
T ss_pred             HHhcCceEEEccCCCCchHHHHHHHHHHHcCCCCcceEEEecCCCChHHHHHHhhcCCceeeEEeeccchHHHHHHHhhh
Confidence            99                                                                    8888875   


Q ss_pred             -hhhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc--------------------------
Q psy3652         203 -RFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK--------------------------  255 (394)
Q Consensus       203 -~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~--------------------------  255 (394)
                       ..|++.|||||+.|.||++|||+|.|++..+..+|.++||+|.+.+|+|||++                          
T Consensus       263 stvKkvslELGGNAPfIVFddadld~Av~g~mA~KFr~~GQtCVcaNR~yVh~~iyD~Fv~~l~e~vkkl~vGdG~~~~t  342 (503)
T KOG2451|consen  263 STVKKVSLELGGNAPFIVFDDADLDQAVEGAMACKFRNSGQTCVCANRVYVHDSIYDKFVSKLAEAVKKLKVGDGLDPGT  342 (503)
T ss_pred             hhhhheehhhcCCCceEEecCcCHHHHHHHHHHhhhccCCceeEecceeEEehhhHHHHHHHHHHHHHheeccCCCCCCC
Confidence             46899999999999999999999999999999999999999999999999999                          


Q ss_pred             ---------------------------------cCCC-CCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHH
Q psy3652         256 ---------------------------------KIDR-PGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAIT  301 (394)
Q Consensus       256 ---------------------------------~~~~-~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~  301 (394)
                                                       ...+ .++|+.|||+.+++++|-+..||+|||+.+|++|+|+||+|+
T Consensus       343 t~GpLIne~av~Kve~~v~DAvsKga~ii~GGk~~~~lg~~fyePTvl~~V~~~m~~s~eEtFGPla~v~kFdteeEvi~  422 (503)
T KOG2451|consen  343 TQGPLINEKAVEKVEKHVEDAVSKGAKIILGGKERSELGPTFYEPTVLSNVTQNMLVSSEETFGPLASVFKFDTEEEVIE  422 (503)
T ss_pred             ccCCccCHHHHHHHHHHHHHHHhcCCeEEeCCeEccccCCccccceEeecCCccceeeccccccccceeeeeCCHHHHHH
Confidence                                             1122 348999999999999999999999999999999999999999


Q ss_pred             HHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEEec
Q psy3652         302 WNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTINH  381 (394)
Q Consensus       302 ~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~~~  381 (394)
                      ++|+++.||++|+||+|..+..+++  .++++|+|.+|... ..+...||||+|.||+||+++++|+++|+..|++.+-.
T Consensus       423 ~ANdt~vGLAgYvfs~~~s~~~rVa--e~LEvGmVGvNegl-is~~~~pFGGVKeSG~GREgskyGidey~~ik~icig~  499 (503)
T KOG2451|consen  423 WANDTRVGLAGYVFSNNLSRLFRVA--EALEVGMVGVNEGL-ISDAEAPFGGVKESGFGREGSKYGIDEYLVIKYICIGT  499 (503)
T ss_pred             HhccCccceeeEEeccCHHHHHHHH--HHHhcceeecccce-ecccccCcCCccccccCccccccchhhhhhhheeeecC
Confidence            9999999999999999999999999  88999999999853 45677999999999999999999999999999987753

>PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating]

Probab=100.00  E-value=1.7e-77  Score=615.23  Aligned_cols=353  Identities=24%  Similarity=0.385  Sum_probs=320.5

Q ss_pred             CCCCCCceeCCeecc--CCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhC
Q psy3652          33 GSVNPGVYDGTSWKA--NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHK  110 (394)
Q Consensus        33 ~~~~~~~~i~G~~~~--~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~  110 (394)
                      +++..++||||+|+.  ++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|++++++|+++
T Consensus       110 ~~~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eR~~iL~k~a~~L~~~  189 (604)
T PLN02419        110 MPPRVPNLIGGSFVESQSSSFIDVINPATQEVVSKVPLTTNEEFKAAVSAAKQAFPLWRNTPITTRQRVMLKFQELIRKN  189 (604)
T ss_pred             cccccceeECCEEecCCCCceEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHh
Confidence            456778999999973  457899999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHH
Q psy3652         111 LVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWN  190 (394)
Q Consensus       111 ~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~  190 (394)
                      +++|++++++|+|||+.+++.|+..+++.++|+++.++.+.++..+....+...++.++|+|||++|+|||||+.+.+++
T Consensus       190 ~~ela~~~~~E~GKp~~ea~~EV~~~i~~~~~~a~~a~~~~g~~~~~~~~~~~~~~~reP~GVV~~I~PwNfPl~l~~~~  269 (604)
T PLN02419        190 MDKLAMNITTEQGKTLKDSHGDIFRGLEVVEHACGMATLQMGEYLPNVSNGVDTYSIREPLGVCAGICPFNFPAMIPLWM  269 (604)
T ss_pred             HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccCCCccceEEecCccEEEEECCCccHHHHHHHH
Confidence            99999999999999999999999999999999999888776654443223444678899999999999999999999999


Q ss_pred             HHHHh----------------------------------------------------------------hHHHHHh----
Q psy3652         191 AAIAL----------------------------------------------------------------VGVAVQS----  202 (394)
Q Consensus       191 ~~~aL----------------------------------------------------------------~g~~i~~----  202 (394)
                      +++||                                                                +|+.|++    
T Consensus       270 iapALaAGNtVVlKPSe~tp~ta~~l~~l~~eAGlP~GvvnvV~G~~~~~~~L~~~~~Vd~V~FTGSt~vG~~I~~~Aa~  349 (604)
T PLN02419        270 FPVAVTCGNTFILKPSEKDPGASVILAELAMEAGLPDGVLNIVHGTNDTVNAICDDEDIRAVSFVGSNTAGMHIYARAAA  349 (604)
T ss_pred             HHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHhCcCcceEEEEeCChHHHHHHHhCCCCCEEEEeCChHHHHHHHHHHhc
Confidence            99998                                                                7777764    


Q ss_pred             hhhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc---------------------------
Q psy3652         203 RFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK---------------------------  255 (394)
Q Consensus       203 ~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~---------------------------  255 (394)
                      +++|++||||||||+||++|||++.|++.+++++|.|+||.|++++|||||++                           
T Consensus       350 ~lk~v~LELGGknp~IV~~DADld~Aa~~iv~g~f~naGQ~C~A~~Rv~V~~~~d~f~e~l~~~~~~l~vG~p~d~~t~~  429 (604)
T PLN02419        350 KGKRIQSNMGAKNHGLVLPDANIDATLNALLAAGFGAAGQRCMALSTVVFVGDAKSWEDKLVERAKALKVTCGSEPDADL  429 (604)
T ss_pred             cCCcEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhhCCCCcCCCCEEEEeCcHHHHHHHHHHHHHHhccCCCCCCCCCc
Confidence            57899999999999999999999999999999999999999999999999866                           


Q ss_pred             --------------------------c-----C--C--CCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHH
Q psy3652         256 --------------------------K-----I--D--RPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAI  300 (394)
Q Consensus       256 --------------------------~-----~--~--~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi  300 (394)
                                                .     .  +  ..|+|++|||+.+++++|.+++||+||||++|++|+|+||||
T Consensus       430 GPlis~~~~~~v~~~i~~A~~~GAkvl~GG~~~~~~~~~~G~f~~PTVL~~v~~d~~i~~eEiFGPVl~V~~~~~~dEAI  509 (604)
T PLN02419        430 GPVISKQAKERICRLIQSGVDDGAKLLLDGRDIVVPGYEKGNFIGPTILSGVTPDMECYKEEIFGPVLVCMQANSFDEAI  509 (604)
T ss_pred             cCCCCHHHHHHHHHHHHHHHhcCCEEEeCCccccCCCCCCCeEEeeEEEeCCCCCCHHHcCCCcCCEEEEEecCCHHHHH
Confidence                                      0     0  0  248999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCC--CCchHHHHHhhhheeEEE
Q psy3652         301 TWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGG--RESGSDSWKQYCRRSTVT  378 (394)
Q Consensus       301 ~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G--~~~g~~~l~~f~~~k~v~  378 (394)
                      +++|+++|||++||||+|..++.+++  .++++|.|+||.......+.+||||+|.||+|  +++|.+++++|++.|+|+
T Consensus       510 ~laN~s~yGLaasVfT~d~~~a~~~a--~~l~aG~V~IN~~~~~~~~~~PFGG~k~SG~G~~~~~G~~gl~~ft~~K~v~  587 (604)
T PLN02419        510 SIINKNKYGNGAAIFTSSGAAARKFQ--MDIEAGQIGINVPIPVPLPFFSFTGNKASFAGDLNFYGKAGVDFFTQIKLVT  587 (604)
T ss_pred             HHHhCCCCCcEEEEECCCHHHHHHHH--HhCCeeeEEEcCCCCCCCCCCCcCCcCcCCCCCCcccHHHHHHHhhCeEEEE
Confidence            99999999999999999999999999  88999999999865455567999999999999  799999999999999998


Q ss_pred             Eec-CCcccc
Q psy3652         379 INH-GKEITL  387 (394)
Q Consensus       379 ~~~-~~~~~~  387 (394)
                      ++. +-+.|+
T Consensus       588 ~~~~~~~~~~  597 (604)
T PLN02419        588 QKQKDIHSPF  597 (604)
T ss_pred             EccCCccCCC
Confidence            875 234454

>PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional

Probab=100.00  E-value=3.1e-77  Score=606.74  Aligned_cols=343  Identities=29%  Similarity=0.487  Sum_probs=314.2

Q ss_pred             CCCCceeCCeecc--CCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHH
Q psy3652          35 VNPGVYDGTSWKA--NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLV  112 (394)
Q Consensus        35 ~~~~~~i~G~~~~--~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~  112 (394)
                      ...++||||+|+.  ++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|++++++|+++++
T Consensus         9 ~~~~~~i~G~~~~~~~~~~~~v~nP~tg~~v~~~~~~~~~~v~~av~~A~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~   88 (482)
T PRK11241          9 FRQQALINGEWLDANNGEVIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERANILRRWFNLMMEHQD   88 (482)
T ss_pred             ccccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHH
Confidence            3456899999973  57889999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHH
Q psy3652         113 PLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAA  192 (394)
Q Consensus       113 ~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~  192 (394)
                      +|++++++|+|||..+++.|+..+++.++|++..++++.++..+...++...+++++|+|||++|+|||||+.+.+++++
T Consensus        89 ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~  168 (482)
T PRK11241         89 DLARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAG  168 (482)
T ss_pred             HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEeeceEEEEECCCcChHHHHHHHHH
Confidence            99999999999999999999999999999999988776665444323344567889999999999999999999999999


Q ss_pred             HHh-----------------------------------------------------------------hHHHHHh----h
Q psy3652         193 IAL-----------------------------------------------------------------VGVAVQS----R  203 (394)
Q Consensus       193 ~aL-----------------------------------------------------------------~g~~i~~----~  203 (394)
                      +||                                                                 +|+.|++    +
T Consensus       169 ~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~FTGS~~~G~~i~~~aa~~  248 (482)
T PRK11241        169 PALAAGCTMVLKPASQTPFSALALAELAIRAGIPAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTEIGRQLMEQCAKD  248 (482)
T ss_pred             HHHHhCCEEEEECCCCChHHHHHHHHHHHHcCCCcccEEEEecCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhc
Confidence            999                                                                 6777765    5


Q ss_pred             hhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc----------------------------
Q psy3652         204 FGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK----------------------------  255 (394)
Q Consensus       204 ~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~----------------------------  255 (394)
                      ++|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||++                            
T Consensus       249 l~~~~lElGGknp~IV~~dADld~aa~~i~~~~f~~aGQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~  328 (482)
T PRK11241        249 IKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAVSKLHIGDGLEKGVTI  328 (482)
T ss_pred             CCcEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEeHHHHHHHHHHHHHHHhhCCCCCCCCCCCCc
Confidence            7899999999999999999999999999999999999999999999999999                            


Q ss_pred             -------------------------c-----C-CCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHh
Q psy3652         256 -------------------------K-----I-DRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNN  304 (394)
Q Consensus       256 -------------------------~-----~-~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n  304 (394)
                                               .     . +.+|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|
T Consensus       329 Gpli~~~~~~~v~~~i~~a~~~Ga~vl~GG~~~~~~g~f~~Ptvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eai~~aN  408 (482)
T PRK11241        329 GPLIDEKAVAKVEEHIADALEKGARVVCGGKAHELGGNFFQPTILVDVPANAKVAKEETFGPLAPLFRFKDEADVIAQAN  408 (482)
T ss_pred             CCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCCCCCeEEeeEEEECCCCCChhhhCcCcCCEEEEEEeCCHHHHHHHhh
Confidence                                     0     0 12489999999999999999999999999999999999999999999


Q ss_pred             cCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEEe
Q psy3652         305 EVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTIN  380 (394)
Q Consensus       305 ~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~~  380 (394)
                      +++|||++||||+|.+++++++  .++++|+||||+... ..+.+||||+|.||+|+++|.+++++|++.|++++.
T Consensus       409 ~s~~GL~a~Vft~d~~~a~~~~--~~l~~G~v~iN~~~~-~~~~~PfGG~k~SG~G~~~g~~g~~~ft~~k~v~~~  481 (482)
T PRK11241        409 DTEFGLAAYFYARDLSRVFRVG--EALEYGIVGINTGII-SNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCIG  481 (482)
T ss_pred             CCCCCceEEEEcCCHHHHHHHH--HHcCccEEEECCCCC-CCCCCCcCCccccccCcccHHHHHHHhhcceEEEEe
Confidence            9999999999999999999999  889999999998643 345689999999999999999999999999998753

>COG1012 PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion]

Probab=100.00  E-value=5.9e-77  Score=600.73  Aligned_cols=342  Identities=37%  Similarity=0.624  Sum_probs=317.1

Q ss_pred             CceeCCeeccCCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHH
Q psy3652          38 GVYDGTSWKANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQL  117 (394)
Q Consensus        38 ~~~i~G~~~~~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~  117 (394)
                      ++||||+|+....+++++||+||+++++++.++.+|+++|+++|++||+.|+.+++.+|.++|++++++|++++++|+++
T Consensus         2 ~~~i~g~~~~~~~~~~~~nP~tg~~i~~~~~a~~~dv~~Av~aA~~a~~~W~~~~~~eR~~iL~~~a~~l~~~~~ela~~   81 (472)
T COG1012           2 KLLIDGEWVDGASTIEVINPATGEVIATVPAATAEDVDAAVAAARAAFEAWSRLSAEERAAILRRIADLLEARAEELAAL   81 (472)
T ss_pred             CccCCCeecCCCCceeeeCCCCCCEEeeecCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence            57999999854449999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh--
Q psy3652         118 VSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL--  195 (394)
Q Consensus       118 ~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL--  195 (394)
                      +++|+|||+.+++.|+..+++.++|+++.++++.+...+... +...+++++|+|||++|+|||||+++.+|+++|||  
T Consensus        82 ~~~e~Gk~i~ea~~ei~~~~~~~~~~a~~~~~~~~~~~~~~~-~~~~~~~~~P~GVv~~I~PwNfP~~~~~~k~apALaa  160 (472)
T COG1012          82 ITLETGKPISEARGEIARAADFIRYYAEEARRLEGETIPTDK-GSKALVRREPLGVVGAITPWNFPLALAAWKLAPALAA  160 (472)
T ss_pred             HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCCCC-CcceEEEeecceEEEEECCCCCHHHHHHhhHHHHHHc
Confidence            999999999999999999999999999999887776544332 56778899999999999999999999999999999  


Q ss_pred             ---------------------------------------------------------------hHHHHHh----hhhhhc
Q psy3652         196 ---------------------------------------------------------------VGVAVQS----RFGKLL  208 (394)
Q Consensus       196 ---------------------------------------------------------------~g~~i~~----~~~~~~  208 (394)
                                                                                     +|+.|++    ++||++
T Consensus       161 GntVV~KPse~tp~sa~~l~~~~~~aglP~Gv~nvv~g~~~~~g~~l~~~p~v~~i~FTGSt~~G~~i~~~Aa~~~k~~~  240 (472)
T COG1012         161 GNTVVLKPSEQTPLSALALAELAAEAGLPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGSTAVGRAIAAAAAANLKPVT  240 (472)
T ss_pred             CCEEEEECcccCcHHHHHHHHHHHHhCCCCCeEEEEeCCCchHHHHHhcCCCCCEEEEECChHHHHHHHHHHhhcCCcEE
Confidence                                                                           6787765    568999


Q ss_pred             cccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc---------------------------------
Q psy3652         209 LELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK---------------------------------  255 (394)
Q Consensus       209 lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~---------------------------------  255 (394)
                      +|||||||+||++|||++.|++.+++++|.|+||.|++.+|+|||++                                 
T Consensus       241 lELGGk~p~IV~~dAdl~~Av~~~~~g~f~n~GQ~C~a~~R~~V~~~v~d~f~~~l~~~~~~l~~Gd~~d~~t~~Gpli~  320 (472)
T COG1012         241 LELGGKSPAIVLEDADLDAAVDAAVFGAFFNAGQRCTAASRLIVHESVYDEFVERLVARAASLKVGDPLDPSTDLGPLIS  320 (472)
T ss_pred             EECCCCCCeEECCCCCHHHHHHHHHHHHHhCCCCCccCCeEEEEehhhHHHHHHHHHHHHhcCCCCCCCCCCCccCCCCC
Confidence            99999999999999999999999999999999999999999999998                                 


Q ss_pred             --------------------cC----CCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcCCCCcE
Q psy3652         256 --------------------KI----DRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLS  311 (394)
Q Consensus       256 --------------------~~----~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~~gLs  311 (394)
                                          ..    ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+
T Consensus       321 ~~~~~~v~~~i~~a~~~G~~~~~Gg~~~~g~~~~PTv~~~v~~~~~i~~eEiFGPVl~v~~~~~~dEAi~lAN~t~yGL~  400 (472)
T COG1012         321 EEQLDRVEGYIEDAVAEGARLLAGGKRPGGYFVEPTILEGVTPDMRIAREEIFGPVLPVIRFKDEEEAIELANDTEYGLA  400 (472)
T ss_pred             HHHHHHHHHHHHHHHHcCCEEEeCCcCCCCeEECCEEEecCCCCChhhhccccCCceEEEEeCCHHHHHHHHhCCCCCce
Confidence                                00    111899999999999999999999999999999999999999999999999999


Q ss_pred             EEEEcCCHHHHHHhhcccccceeEEEEcCCCC-CCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEEecC
Q psy3652         312 SSIFTKDVTNLFKWLGPQGSDCGLINVNIPTN-GAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTINHG  382 (394)
Q Consensus       312 a~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~-~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~~~~  382 (394)
                      ++|||+|..++.+++  .++++|+|+||.... .....+||||+|.||+|+++|.+++++|++.|++.++..
T Consensus       401 a~v~t~d~~~~~~~~--~~l~aG~v~iN~~~~~~~~~~~PFGG~k~SG~G~~~g~~~~~~~~~~k~v~~~~~  470 (472)
T COG1012         401 AAIFTRDLARAFRVA--RRLEAGMVGINDYTGGADIAYLPFGGVKQSGLGREGGKYGLEEFTEVKTVTIKLG  470 (472)
T ss_pred             EEEEcCCHHHHHHHH--hcCCeeEEEECCCCCCCCCCCCCCCCcccccCCccchHHHHHHHhcceEEEEecC
Confidence            999999999999999  899999999998643 455678999999999999999999999999999988753

>TIGR03374 ABALDH 1-pyrroline dehydrogenase

Probab=100.00  E-value=2e-75  Score=592.82  Aligned_cols=341  Identities=26%  Similarity=0.461  Sum_probs=311.9

Q ss_pred             CCceeCCeecc-CCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHH
Q psy3652          37 PGVYDGTSWKA-NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLG  115 (394)
Q Consensus        37 ~~~~i~G~~~~-~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~  115 (394)
                      .++||||+|+. ++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|++++++|++++++|+
T Consensus         2 ~~~~i~g~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela   81 (472)
T TIGR03374         2 HKLLINGELVSGEGEKQPVYNPATGEVILEIAEASAEQVDAAVRAADAAFAEWGQTTPKARAECLLKLADVIEENAQVFA   81 (472)
T ss_pred             CCceECCEEecCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence            35799999984 57889999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHcCCChHHhH-HHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHH
Q psy3652         116 QLVSLEMGKILAEGI-GEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIA  194 (394)
Q Consensus       116 ~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~a  194 (394)
                      +++++|+|||..++. .|+..+++.++|+++..+.+.+...+...++...++.++|+|||++|+|||||+.+.++++++|
T Consensus        82 ~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~A  161 (472)
T TIGR03374        82 ELESRNCGKPLHSVFNDEIPAIVDVFRFFAGAARCLSGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPA  161 (472)
T ss_pred             HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCccCCCceEEEEEecceEEEEECCCCchHHHHHHHHHHH
Confidence            999999999999996 5999999999999988776655432222234456789999999999999999999999999999


Q ss_pred             h----------------------------------------------------------------hHHHHHh----hhhh
Q psy3652         195 L----------------------------------------------------------------VGVAVQS----RFGK  206 (394)
Q Consensus       195 L----------------------------------------------------------------~g~~i~~----~~~~  206 (394)
                      |                                                                +|+.|++    ++||
T Consensus       162 LaaGN~VV~KPs~~tp~~~~~l~~l~~~~lP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~~~  241 (472)
T TIGR03374       162 LAAGNCVVLKPSEITPLTALKLAELAKDIFPAGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHILSHTAPSIKR  241 (472)
T ss_pred             HhcCCEEEecCCCCCCHHHHHHHHHHHHhCCcCeEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhhcccc
Confidence            9                                                                7777765    5689


Q ss_pred             hccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc-------------------------------
Q psy3652         207 LLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK-------------------------------  255 (394)
Q Consensus       207 ~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~-------------------------------  255 (394)
                      +++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++                               
T Consensus       242 ~~lElGGk~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p~~~~~~~Gpl  321 (472)
T TIGR03374       242 THMELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQDCTAACRIYAQRGIYDTLVEKLGAAVATLKSGAPDDESTELGPL  321 (472)
T ss_pred             eEEecCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCccccCCEEEEcHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCC
Confidence            9999999999999999999999999999999999999999999999999                               


Q ss_pred             -------------------c----------CCCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcC
Q psy3652         256 -------------------K----------IDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEV  306 (394)
Q Consensus       256 -------------------~----------~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~  306 (394)
                                         .          .+..|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|++
T Consensus       322 i~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~an~~  401 (472)
T TIGR03374       322 SSLAHLERVMKAVEEAKALGHIKVITGGEKRKGNGYYFAPTLLAGAKQDDAIVQKEVFGPVVSITSFDDEEQVVNWANDS  401 (472)
T ss_pred             CCHHHHHHHHHHHHHHHHcCCeEEEeCCccCCCCCeEEeeEEEeCCCCCChhhhCCccCceEEEEEECCHHHHHHHHhCC
Confidence                               0          01237899999999999999999999999999999999999999999999


Q ss_pred             CCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEEe
Q psy3652         307 KQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTIN  380 (394)
Q Consensus       307 ~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~~  380 (394)
                      +|||++||||+|..++.+++  .++++|.|+||... ...+.+||||+|.||+|+++|.+++++|++.|+++++
T Consensus       402 ~~gL~a~vft~d~~~~~~~~--~~l~~G~v~iN~~~-~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~i~~~  472 (472)
T TIGR03374       402 QYGLASSVWTKDVGRAHRLS--ARLQYGCTWVNTHF-MLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHIMVK  472 (472)
T ss_pred             CCCceEEEECCCHHHHHHHH--HhCCcceEEECCCC-CCCCCCCCCCCccCccCccchHHHHHHhhceEEEEEC
Confidence            99999999999999999999  88999999999864 3556799999999999999999999999999998753

Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family.

>PLN02278 succinic semialdehyde dehydrogenase

Probab=100.00  E-value=5.4e-75  Score=593.39  Aligned_cols=355  Identities=31%  Similarity=0.482  Sum_probs=321.6

Q ss_pred             chhhhhcCCCCCCCCCceeCCeecc--CCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHH
Q psy3652          23 YPFLKELGLSGSVNPGVYDGTSWKA--NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIV  100 (394)
Q Consensus        23 ~~~~~~~~~~~~~~~~~~i~G~~~~--~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L  100 (394)
                      .+.+..++...+...++||||+|+.  ++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|
T Consensus        11 ~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L   90 (498)
T PLN02278         11 QSALVKLRNAGLLRTQGLIGGKWTDAYDGKTFPVYNPATGEVIANVPCMGRAETNDAIASAHDAFPSWSKLTASERSKIL   90 (498)
T ss_pred             HHHHHHhhcCCCCcccceECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHH
Confidence            3444444444467788999999973  56889999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhCHHHHHHHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccC
Q psy3652         101 RQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAF  180 (394)
Q Consensus       101 ~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~  180 (394)
                      ++++++|++++++|++++++|+|||..++..|+..+++.++|+++.++.+.+...+...++...++.++|+|||++|+||
T Consensus        91 ~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~Ev~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~GvV~~I~Pw  170 (498)
T PLN02278         91 RRWYDLIIANKEDLAQLMTLEQGKPLKEAIGEVAYGASFLEYFAEEAKRVYGDIIPSPFPDRRLLVLKQPVGVVGAITPW  170 (498)
T ss_pred             HHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEeecccEEEEECCC
Confidence            99999999999999999999999999999999999999999999998877665444333344567789999999999999


Q ss_pred             CchhHhHHHHHHHHh-----------------------------------------------------------------
Q psy3652         181 NFPVAVYGWNAAIAL-----------------------------------------------------------------  195 (394)
Q Consensus       181 N~P~~~~~~~~~~aL-----------------------------------------------------------------  195 (394)
                      |||+.+.++++++||                                                                 
T Consensus       171 N~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~l~eaglP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~  250 (498)
T PLN02278        171 NFPLAMITRKVGPALAAGCTVVVKPSELTPLTALAAAELALQAGIPPGVLNVVMGDAPEIGDALLASPKVRKITFTGSTA  250 (498)
T ss_pred             ccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCCcccEEEEecCChhhHHHHhcCCCcCEEEEECcHH
Confidence            999999999999999                                                                 


Q ss_pred             hHHHHHh----hhhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc----------------
Q psy3652         196 VGVAVQS----RFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK----------------  255 (394)
Q Consensus       196 ~g~~i~~----~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~----------------  255 (394)
                      +|+.|++    .+||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++                
T Consensus       251 ~G~~i~~~aa~~~~~~~lElGGk~~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~~~l  330 (498)
T PLN02278        251 VGKKLMAGAAATVKRVSLELGGNAPFIVFDDADLDVAVKGALASKFRNSGQTCVCANRILVQEGIYDKFAEAFSKAVQKL  330 (498)
T ss_pred             HHHHHHHHHhhcCCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHhccCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhc
Confidence            7777765    45799999999999999999999999999999999999999999999999999                


Q ss_pred             -------------------------------------c-----C-CCCCceecCeEEEcCCCCCcccccccccceEEEEe
Q psy3652         256 -------------------------------------K-----I-DRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFP  292 (394)
Q Consensus       256 -------------------------------------~-----~-~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~  292 (394)
                                                           .     . +.+|+|+.|||+.+++++|++++||+||||++|++
T Consensus       331 ~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~~E~FGPVl~v~~  410 (498)
T PLN02278        331 VVGDGFEEGVTQGPLINEAAVQKVESHVQDAVSKGAKVLLGGKRHSLGGTFYEPTVLGDVTEDMLIFREEVFGPVAPLTR  410 (498)
T ss_pred             CCCCCCCCCCcCCCccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCceEeeEEEecCCCCChhhhCCCcCCEEEEEe
Confidence                                                 0     0 11478999999999999999999999999999999


Q ss_pred             eCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhh
Q psy3652         293 FDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYC  372 (394)
Q Consensus       293 ~~~~~eAi~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~  372 (394)
                      |+|+||||+++|+++|||+++|||+|.+++++++  .++++|.|+||.... ..+.+||||+|.||+|+++|++++++|+
T Consensus       411 ~~~~deai~~~N~~~~gL~a~vft~d~~~~~~~~--~~l~~G~v~iN~~~~-~~~~~PfGG~k~SG~G~~~G~~~l~~ft  487 (498)
T PLN02278        411 FKTEEEAIAIANDTEAGLAAYIFTRDLQRAWRVS--EALEYGIVGVNEGLI-STEVAPFGGVKQSGLGREGSKYGIDEYL  487 (498)
T ss_pred             eCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHH--HhCCcCeEEECCCCC-CCCCCCcCCcccCcCCccchHHHHHHhh
Confidence            9999999999999999999999999999999999  889999999998653 3456899999999999999999999999


Q ss_pred             heeEEEEe
Q psy3652         373 RRSTVTIN  380 (394)
Q Consensus       373 ~~k~v~~~  380 (394)
                      +.|++.+.
T Consensus       488 ~~k~i~~~  495 (498)
T PLN02278        488 EIKYVCLG  495 (498)
T ss_pred             eeEEEEEe
Confidence            99999764

>cd07130 ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B

Probab=100.00  E-value=3.1e-74  Score=585.53  Aligned_cols=341  Identities=67%  Similarity=1.137  Sum_probs=312.0

Q ss_pred             eeCCeeccCCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHH
Q psy3652          40 YDGTSWKANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVS  119 (394)
Q Consensus        40 ~i~G~~~~~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~  119 (394)
                      ||||+|+.++.+++++||+||+++++++.++.+|+++++++|++||+.|+.+|.++|.++|++++++|++++++|+++++
T Consensus         2 ~i~g~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~   81 (474)
T cd07130           2 VYDGEWGGGGGVVTSISPANGEPIARVRQATPEDYESTIKAAQEAFKEWRDVPAPKRGEIVRQIGDALRKKKEALGKLVS   81 (474)
T ss_pred             eECCEEecCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            79999986678899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh----
Q psy3652         120 LEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL----  195 (394)
Q Consensus       120 ~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL----  195 (394)
                      +|+|||..++..|+..+++.++|+++..+.+.+...+...++...++.++|+|||++|+|||||+.+.++++++||    
T Consensus        82 ~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN  161 (474)
T cd07130          82 LEMGKILPEGLGEVQEMIDICDFAVGLSRQLYGLTIPSERPGHRMMEQWNPLGVVGVITAFNFPVAVWGWNAAIALVCGN  161 (474)
T ss_pred             HHcCCCHHHHHHHHHHHHHHHHHHHHhHHHhcCccccCCCCCceEEEEEecceeEEEEccCCCHHHHHHHHhhHHHHcCC
Confidence            9999999999999999999999999887776665444333444557789999999999999999999999999998    


Q ss_pred             ----------------------------------------------------------------hHHHHHh----hhhhh
Q psy3652         196 ----------------------------------------------------------------VGVAVQS----RFGKL  207 (394)
Q Consensus       196 ----------------------------------------------------------------~g~~i~~----~~~~~  207 (394)
                                                                                      +|+.|++    +++|+
T Consensus       162 ~VvlKps~~~p~~~~~l~~l~~~~~~~aglP~gv~~~v~g~~~~~~~L~~~~~vd~V~fTGs~~~g~~i~~~aa~~~~~~  241 (474)
T cd07130         162 VVVWKPSPTTPLTAIAVTKIVARVLEKNGLPGAIASLVCGGADVGEALVKDPRVPLVSFTGSTAVGRQVGQAVAARFGRS  241 (474)
T ss_pred             eEEeeCCccCHHHHHHHHHHHHHHHHhcCCCCCcEEEEeCChhHHHHHhcCCCCCEEEEECchHHHHHHHHHHHhcCCCE
Confidence                                                                            6777765    46789


Q ss_pred             ccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc--------------------------------
Q psy3652         208 LLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK--------------------------------  255 (394)
Q Consensus       208 ~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~--------------------------------  255 (394)
                      ++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++                                
T Consensus       242 ~lElGGk~p~iV~~dadl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli  321 (474)
T cd07130         242 LLELGGNNAIIVMEDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESIYDEVLERLKKAYKQVRIGDPLDDGTLVGPLH  321 (474)
T ss_pred             EEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEcHhHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCc
Confidence            999999999999999999999999999999999999999999999999                                


Q ss_pred             ---------------------------cCCCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcCCC
Q psy3652         256 ---------------------------KIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQ  308 (394)
Q Consensus       256 ---------------------------~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~~  308 (394)
                                                 ..+..|+|+.|||+.++++ |++++||+||||++|++|+|+||||+++|+++|
T Consensus       322 ~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~~~~-~~i~~eE~FGPvl~v~~~~~~~eai~~aN~~~~  400 (474)
T cd07130         322 TKAAVDNYLAAIEEAKSQGGTVLFGGKVIDGPGNYVEPTIVEGLSD-APIVKEETFAPILYVLKFDTLEEAIAWNNEVPQ  400 (474)
T ss_pred             CHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCeEEccEEEecCCC-CHHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCC
Confidence                                       0012488999999988766 999999999999999999999999999999999


Q ss_pred             CcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEEec
Q psy3652         309 GLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTINH  381 (394)
Q Consensus       309 gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~~~  381 (394)
                      ||++||||+|.+++++++++.++++|+|+||.++....+.+||||+|.||+|+++|++++++|++.|++++++
T Consensus       401 gL~a~v~t~d~~~a~~~~~~~~~~~g~v~iN~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~f~~~k~~~~~~  473 (474)
T cd07130         401 GLSSSIFTTDLRNAFRWLGPKGSDCGIVNVNIGTSGAEIGGAFGGEKETGGGRESGSDAWKQYMRRSTCTINY  473 (474)
T ss_pred             CceEEEEcCCHHHHHHHHhhcCcceEEEEEcCCCCCCCCCCCcCccccccCCccchHHHHHHHhheEEEEEec
Confidence            9999999999999999984445999999999866566678999999999999999999999999999998875

Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer.

>PLN02466 aldehyde dehydrogenase family 2 member

Probab=100.00  E-value=3.7e-74  Score=590.00  Aligned_cols=342  Identities=28%  Similarity=0.511  Sum_probs=313.0

Q ss_pred             CCCceeCCeec--cCCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHH--hhcCChhhHHHHHHHHHHHHhhCH
Q psy3652          36 NPGVYDGTSWK--ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAA--WAALPAPRRGEIVRQIGDALRHKL  111 (394)
Q Consensus        36 ~~~~~i~G~~~--~~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~--w~~~~~~~R~~~L~~~a~~l~~~~  111 (394)
                      ..++||||+|+  .++.+++++||+||+++++++.++.+|+++|+++|++||+.  |+.++.++|.++|++++++|++++
T Consensus        57 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~Av~aA~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~  136 (538)
T PLN02466         57 YTQLLINGQFVDAASGKTFPTLDPRTGEVIAHVAEGDAEDVNRAVAAARKAFDEGPWPKMTAYERSRILLRFADLLEKHN  136 (538)
T ss_pred             cccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCcCccccCCHHHHHHHHHHHHHHHHHhH
Confidence            34789999997  36788999999999999999999999999999999999984  999999999999999999999999


Q ss_pred             HHHHHHHHHHcCCChHHhH-HHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHH
Q psy3652         112 VPLGQLVSLEMGKILAEGI-GEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWN  190 (394)
Q Consensus       112 ~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~  190 (394)
                      ++|++++++|+|||..+++ .|+..+++.++|++++.+++.+...+.. .+...++.++|+|||++|+|||||+.+.+++
T Consensus       137 ~ela~~~~~e~GK~~~~a~~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVV~~I~PwN~P~~l~~~~  215 (538)
T PLN02466        137 DELAALETWDNGKPYEQSAKAELPMFARLFRYYAGWADKIHGLTVPAD-GPHHVQTLHEPIGVAGQIIPWNFPLLMFAWK  215 (538)
T ss_pred             HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccC-CCceEEEEEecceEEEEECCCchHHHHHHHH
Confidence            9999999999999999996 5999999999999998887766554432 2234578899999999999999999999999


Q ss_pred             HHHHh-----------------------------------------------------------------hHHHHHh---
Q psy3652         191 AAIAL-----------------------------------------------------------------VGVAVQS---  202 (394)
Q Consensus       191 ~~~aL-----------------------------------------------------------------~g~~i~~---  202 (394)
                      +++||                                                                 +|+.|++   
T Consensus       216 i~pALaaGN~VVlKPs~~tp~~~~~l~~ll~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~FTGS~~~G~~v~~~aa  295 (538)
T PLN02466        216 VGPALACGNTIVLKTAEQTPLSALYAAKLLHEAGLPPGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDTGKIVLELAA  295 (538)
T ss_pred             HhHHHHcCCEEEeECCCCCcHHHHHHHHHHHhcCCCcccEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHH
Confidence            99999                                                                 7777754   


Q ss_pred             --hhhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc-------------------------
Q psy3652         203 --RFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK-------------------------  255 (394)
Q Consensus       203 --~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~-------------------------  255 (394)
                        ++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++                         
T Consensus       296 ~~~l~pv~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vG~p~~~~  375 (538)
T PLN02466        296 KSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFVEKAKARALKRVVGDPFKKG  375 (538)
T ss_pred             hcCCCcEEEEcCCCCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCcCcEEEEcHHHHHHHHHHHHHHHHhccCCCCccCC
Confidence              45789999999999999999999999999999999999999999999999999                         


Q ss_pred             ----------------------------------cCCCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHH
Q psy3652         256 ----------------------------------KIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAIT  301 (394)
Q Consensus       256 ----------------------------------~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~  301 (394)
                                                        ..+..|+|+.|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus       376 ~~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~g~~i~Ptvl~~v~~d~~i~~eE~FGPVl~v~~~~d~deAi~  455 (538)
T PLN02466        376 VEQGPQIDSEQFEKILRYIKSGVESGATLECGGDRFGSKGYYIQPTVFSNVQDDMLIAQDEIFGPVQSILKFKDLDEVIR  455 (538)
T ss_pred             CCCccCCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCceEEEEEEEecCCCCCchhcCCccCcEEEEEEeCCHHHHHH
Confidence                                              0012478999999999999999999999999999999999999999


Q ss_pred             HHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEEec
Q psy3652         302 WNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTINH  381 (394)
Q Consensus       302 ~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~~~  381 (394)
                      ++|+++|||+++|||+|.+++.+++  .++++|.|+||... ..++.+||||+|.||+|+++|.+++++|++.|++++.+
T Consensus       456 ~aN~~~~GL~a~VfT~d~~~a~~~~--~~l~aG~v~IN~~~-~~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~k~v~~~~  532 (538)
T PLN02466        456 RANNTRYGLAAGVFTQNLDTANTLS--RALRVGTVWVNCFD-VFDAAIPFGGYKMSGIGREKGIYSLNNYLQVKAVVTPL  532 (538)
T ss_pred             HHhCCCCCceEEEEcCCHHHHHHHH--HhCCeeeEEECCCC-CCCCCCCcCCCCcCccCcccHHHHHHHhcceEEEEEeC
Confidence            9999999999999999999999999  88999999999753 45567899999999999999999999999999998865

>cd07117 ALDH_StaphAldA1 Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like

Probab=100.00  E-value=6.3e-74  Score=582.74  Aligned_cols=339  Identities=29%  Similarity=0.508  Sum_probs=310.4

Q ss_pred             CceeCCeecc--CCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHH
Q psy3652          38 GVYDGTSWKA--NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLG  115 (394)
Q Consensus        38 ~~~i~G~~~~--~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~  115 (394)
                      ++||||+|+.  ++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|+++++.|++++++|+
T Consensus         2 ~~~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la   81 (475)
T cd07117           2 GLFINGEWVKGSSGETIDSYNPANGETLSEITDATDADVDRAVKAAQEAFKTWRKTTVAERANILNKIADIIDENKELLA   81 (475)
T ss_pred             CceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHH
Confidence            5799999973  56889999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHcCCChHHhHH-HHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHH
Q psy3652         116 QLVSLEMGKILAEGIG-EVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIA  194 (394)
Q Consensus       116 ~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~a  194 (394)
                      +++++|+|||+.+++. |+..+++.++++++.+....++..+.. .+...+.+++|+|||++|+|||||+.+.++++++|
T Consensus        82 ~~~~~e~Gk~~~~a~~~ev~~~i~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVV~~I~PwN~Pl~~~~~~i~~A  160 (475)
T cd07117          82 MVETLDNGKPIRETRAVDIPLAADHFRYFAGVIRAEEGSANMID-EDTLSIVLREPIGVVGQIIPWNFPFLMAAWKLAPA  160 (475)
T ss_pred             HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccC-CCceeEEEEeecceEEEECCCccHHHHHHHHHHHH
Confidence            9999999999999974 999999999999988776655443322 23345788999999999999999999999999999


Q ss_pred             h----------------------------------------------------------------hHHHHHh----hhhh
Q psy3652         195 L----------------------------------------------------------------VGVAVQS----RFGK  206 (394)
Q Consensus       195 L----------------------------------------------------------------~g~~i~~----~~~~  206 (394)
                      |                                                                +|+.|++    +++|
T Consensus       161 L~aGN~VvlKPs~~~p~~~~~l~~~~~~~lP~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~  240 (475)
T cd07117         161 LAAGNTVVIKPSSTTSLSLLELAKIIQDVLPKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTEVGRDVAIAAAKKLIP  240 (475)
T ss_pred             HHcCCEEEEECCccCcHHHHHHHHHHHHhCCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCCc
Confidence            9                                                                6666654    5679


Q ss_pred             hccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc-------------------------------
Q psy3652         207 LLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK-------------------------------  255 (394)
Q Consensus       207 ~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~-------------------------------  255 (394)
                      +++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++                               
T Consensus       241 ~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~gpl  320 (475)
T cd07117         241 ATLELGGKSANIIFDDANWDKALEGAQLGILFNQGQVCCAGSRIFVQEGIYDEFVAKLKEKFENVKVGNPLDPDTQMGAQ  320 (475)
T ss_pred             EEEeCCCCCeEEECCCCChHHHHHHHHHHHhhccCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCcccCc
Confidence            9999999999999999999999999999999999999999999999999                               


Q ss_pred             ----------------------------cCC----CCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHH
Q psy3652         256 ----------------------------KID----RPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWN  303 (394)
Q Consensus       256 ----------------------------~~~----~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~  303 (394)
                                                  ...    ..|+|++|||+.+++++|++++||+||||++|++|+|.||||+++
T Consensus       321 i~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~  400 (475)
T cd07117         321 VNKDQLDKILSYVDIAKEEGAKILTGGHRLTENGLDKGFFIEPTLIVNVTNDMRVAQEEIFGPVATVIKFKTEDEVIDMA  400 (475)
T ss_pred             CCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCeEEeeEEeecCCCCChhhhCCCcCCeEEEEEECCHHHHHHHH
Confidence                                        001    248899999999999999999999999999999999999999999


Q ss_pred             hcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEEe
Q psy3652         304 NEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTIN  380 (394)
Q Consensus       304 n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~~  380 (394)
                      |+++|||++||||+|.+++.+++  .++++|+|+||.++ ...+.+||||+|.||+|+++|.+++++|++.|+++++
T Consensus       401 n~~~~gL~~~v~t~d~~~~~~~~--~~l~~G~v~iN~~~-~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~~~  474 (475)
T cd07117         401 NDSEYGLGGGVFTKDINRALRVA--RAVETGRVWVNTYN-QIPAGAPFGGYKKSGIGRETHKSMLDAYTQMKNIYID  474 (475)
T ss_pred             hCCCcCceEEEECCCHHHHHHHH--HhCCcceEEECCCC-CCCCCCCCCCCccCcCCCCchHHHHHHHhCeEEEEEe
Confidence            99999999999999999999999  88999999999854 4556789999999999999999999999999999765

Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD.

>PLN02766 coniferyl-aldehyde dehydrogenase

Probab=100.00  E-value=5.5e-74  Score=585.91  Aligned_cols=343  Identities=26%  Similarity=0.467  Sum_probs=313.4

Q ss_pred             CCCceeCCeecc--CCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHH--HhhcCChhhHHHHHHHHHHHHhhCH
Q psy3652          36 NPGVYDGTSWKA--NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYA--AWAALPAPRRGEIVRQIGDALRHKL  111 (394)
Q Consensus        36 ~~~~~i~G~~~~--~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~  111 (394)
                      ..++||||+|+.  ++.+++++||+||+++++++.++.+|+++|+++|++||+  .|+.+|.++|.++|++++++|++++
T Consensus        20 ~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~   99 (501)
T PLN02766         20 FTKLFINGEFVDAASGKTFETRDPRTGEVIARIAEGDKEDVDLAVKAAREAFDHGPWPRMSGFERGRIMMKFADLIEEHI   99 (501)
T ss_pred             cccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhH
Confidence            456899999973  567899999999999999999999999999999999997  5999999999999999999999999


Q ss_pred             HHHHHHHHHHcCCChHHhH-HHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHH
Q psy3652         112 VPLGQLVSLEMGKILAEGI-GEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWN  190 (394)
Q Consensus       112 ~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~  190 (394)
                      ++|++++++|+|||..+++ .|+..+++.++|+++.++++.++..+.. .+...++.++|+|||++|+|||||+.+..++
T Consensus       100 ~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~  178 (501)
T PLN02766        100 EELAALDTIDAGKLFALGKAVDIPAAAGLLRYYAGAADKIHGETLKMS-RQLQGYTLKEPIGVVGHIIPWNFPSTMFFMK  178 (501)
T ss_pred             HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccC-CCceEEEEeccceEEEEECCCCChHHHHHHH
Confidence            9999999999999999997 5999999999999998877766543322 2344577899999999999999999999999


Q ss_pred             HHHHh-----------------------------------------------------------------hHHHHHh---
Q psy3652         191 AAIAL-----------------------------------------------------------------VGVAVQS---  202 (394)
Q Consensus       191 ~~~aL-----------------------------------------------------------------~g~~i~~---  202 (394)
                      +++||                                                                 +|+.|++   
T Consensus       179 ~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~p~v~~V~FTGS~~~G~~i~~~aa  258 (501)
T PLN02766        179 VAPALAAGCTMVVKPAEQTPLSALFYAHLAKLAGVPDGVINVVTGFGPTAGAAIASHMDVDKVSFTGSTEVGRKIMQAAA  258 (501)
T ss_pred             HHHHHHcCCEEEEeCCCCchHHHHHHHHHHHhcCCCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhh
Confidence            99999                                                                 6777765   


Q ss_pred             --hhhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc-------------------------
Q psy3652         203 --RFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK-------------------------  255 (394)
Q Consensus       203 --~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~-------------------------  255 (394)
                        +++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++                         
T Consensus       259 ~~~l~~~~lElGGknp~iV~~dADl~~Aa~~i~~g~f~n~GQ~C~a~~ri~V~~si~d~f~~~l~~~~~~l~~G~p~~~~  338 (501)
T PLN02766        259 TSNLKQVSLELGGKSPLLIFDDADVDMAVDLALLGIFYNKGEICVASSRVYVQEGIYDEFVKKLVEKAKDWVVGDPFDPR  338 (501)
T ss_pred             hcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCC
Confidence              45799999999999999999999999999999999999999999999999999                         


Q ss_pred             ----------------------------------cCCCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHH
Q psy3652         256 ----------------------------------KIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAIT  301 (394)
Q Consensus       256 ----------------------------------~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~  301 (394)
                                                        ..+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus       339 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~deai~  418 (501)
T PLN02766        339 ARQGPQVDKQQFEKILSYIEHGKREGATLLTGGKPCGDKGYYIEPTIFTDVTEDMKIAQDEIFGPVMSLMKFKTVEEAIK  418 (501)
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhCCccCceEEEEEeCCHHHHHH
Confidence                                              0012488999999999999999999999999999999999999999


Q ss_pred             HHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEEec
Q psy3652         302 WNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTINH  381 (394)
Q Consensus       302 ~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~~~  381 (394)
                      ++|+++|||++||||+|.+++.+++  .++++|.|+||+.. ...+.+||||+|.||+|+++|.+++++|++.|++++++
T Consensus       419 ~aN~~~~GL~a~Vft~d~~~a~~~~--~~l~~G~v~iN~~~-~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~~~~  495 (501)
T PLN02766        419 KANNTKYGLAAGIVTKDLDVANTVS--RSIRAGTIWVNCYF-AFDPDCPFGGYKMSGFGRDQGMDALDKYLQVKSVVTPL  495 (501)
T ss_pred             HHhCCCCCceEEEECCCHHHHHHHH--HhCCcceEEECCCC-CCCCCCCcCCcccCcCCccchHHHHHHHhceEEEEEec
Confidence            9999999999999999999999999  88999999999754 45567899999999999999999999999999998875


Q ss_pred             C
Q psy3652         382 G  382 (394)
Q Consensus       382 ~  382 (394)
                      -
T Consensus       496 ~  496 (501)
T PLN02766        496 Y  496 (501)
T ss_pred             c
Confidence            3

>cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins

Probab=100.00  E-value=8.4e-74  Score=583.18  Aligned_cols=341  Identities=66%  Similarity=1.080  Sum_probs=314.6

Q ss_pred             ceeCCeeccC-CCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHH
Q psy3652          39 VYDGTSWKAN-GEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQL  117 (394)
Q Consensus        39 ~~i~G~~~~~-~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~  117 (394)
                      +||||+|+.+ +.+++++||+||+++++++.++.+|+++++++|++||+.|+.+|.++|.++|++++++|++++++|+++
T Consensus         1 ~~i~g~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~   80 (478)
T cd07086           1 GVIGGEWVGSGGETFTSRNPANGEPIARVFPASPEDVEAAVAAAREAFKEWRKVPAPRRGEIVRQIGEALRKKKEALGRL   80 (478)
T ss_pred             CcCCCEEecCCCCEEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence            5899999743 578999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh--
Q psy3652         118 VSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL--  195 (394)
Q Consensus       118 ~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL--  195 (394)
                      +++|+|||..+++.|+..+++.++|+++..+.+.++..+...++...++.++|+|||++|+|||||+.+.++++++||  
T Consensus        81 ~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaa  160 (478)
T cd07086          81 VSLEMGKILPEGLGEVQEMIDICDYAVGLSRMLYGLTIPSERPGHRLMEQWNPLGVVGVITAFNFPVAVPGWNAAIALVC  160 (478)
T ss_pred             HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEecceeEEEECCCCcHHHHHHHHHHHHHHc
Confidence            999999999999999999999999999988887765544333344567889999999999999999999999999999  


Q ss_pred             ------------------------------------------------------------------hHHHHHh----hhh
Q psy3652         196 ------------------------------------------------------------------VGVAVQS----RFG  205 (394)
Q Consensus       196 ------------------------------------------------------------------~g~~i~~----~~~  205 (394)
                                                                                        +|+.|++    +++
T Consensus       161 GN~VIlKps~~~p~~~~~l~~~~~~al~~~glP~gvv~~v~g~~~~~~~L~~~~~vd~v~fTGs~~~g~~i~~~aa~~~~  240 (478)
T cd07086         161 GNTVVWKPSETTPLTAIAVTKILAEVLEKNGLPPGVVNLVTGGGDGGELLVHDPRVPLVSFTGSTEVGRRVGETVARRFG  240 (478)
T ss_pred             CCeEEEECCCcchHHHHHHHHHHHHhhhccCCCccceEEEecCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCC
Confidence                                                                              6676654    567


Q ss_pred             hhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc------------------------------
Q psy3652         206 KLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK------------------------------  255 (394)
Q Consensus       206 ~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~------------------------------  255 (394)
                      |+++|+|||||+||++|||++.|++.|++++|.|+||.|++++|||||++                              
T Consensus       241 ~~~lElGG~~p~iV~~dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gp  320 (478)
T cd07086         241 RVLLELGGNNAIIVMDDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESVYDEFLERLVKAYKQVRIGDPLDEGTLVGP  320 (478)
T ss_pred             cEEeecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCCCcCCeEEEEcHHHHHHHHHHHHHHHHhCCcCCCCCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999                              


Q ss_pred             -----------------------c-----CCC---CCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHh
Q psy3652         256 -----------------------K-----IDR---PGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNN  304 (394)
Q Consensus       256 -----------------------~-----~~~---~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n  304 (394)
                                             .     ...   .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|
T Consensus       321 li~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPVl~v~~~~~~deai~~~n  400 (478)
T cd07086         321 LINQAAVEKYLNAIEIAKSQGGTVLTGGKRIDGGEPGNYVEPTIVTGVTDDARIVQEETFAPILYVIKFDSLEEAIAINN  400 (478)
T ss_pred             CCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEEccEEecCCCCCChhhcCCCcCCEEEEEEeCCHHHHHHHHh
Confidence                                   0     001   478999999999999999999999999999999999999999999


Q ss_pred             cCCCCcEEEEEcCCHHHHHHhhcccc--cceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEEec
Q psy3652         305 EVKQGLSSSIFTKDVTNLFKWLGPQG--SDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTINH  381 (394)
Q Consensus       305 ~~~~gLsa~v~t~d~~~a~~~~~~~~--~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~~~  381 (394)
                      +++|||+++|||+|.+++++++  .+  +++|+|+||+++....+.+||||+|.||+|+++|.+++++|++.|+|++++
T Consensus       401 ~~~~gL~a~v~t~d~~~a~~~~--~~~~~~~G~v~iN~~~~~~~~~~PfgG~~~SG~G~~~g~~~~~~f~~~k~i~~~~  477 (478)
T cd07086         401 DVPQGLSSSIFTEDLREAFRWL--GPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGGRESGSDAWKQYMRRSTCTINY  477 (478)
T ss_pred             CCCCcceEEEEcCCHHHHHHHH--hcCcccceeEEECCCCCCCCCCCCCCCcccccCCccchHHHHHHhhceEEEEEeC
Confidence            9999999999999999999999  78  999999999876556678999999999999999999999999999998874

ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105).

>cd07140 ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L

Probab=100.00  E-value=1.5e-73  Score=580.67  Aligned_cols=341  Identities=27%  Similarity=0.556  Sum_probs=310.7

Q ss_pred             CCceeCCeec--cCCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHH--HhhcCChhhHHHHHHHHHHHHhhCHH
Q psy3652          37 PGVYDGTSWK--ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYA--AWAALPAPRRGEIVRQIGDALRHKLV  112 (394)
Q Consensus        37 ~~~~i~G~~~--~~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~  112 (394)
                      .++||||+|+  .++.+++++||+||+++++++.++.+|+++|+++|++||+  .|+.+|.++|.++|++++++|+++++
T Consensus         6 ~~~~I~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~   85 (486)
T cd07140           6 HQLFINGEFVDAEGGKTYNTINPTDGSVICKVSLATVEDVDRAVAAAKEAFENGEWGKMNARDRGRLMYRLADLMEEHQE   85 (486)
T ss_pred             cCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCchhcCCHHHHHHHHHHHHHHHHHhHH
Confidence            4689999997  3568899999999999999999999999999999999998  59999999999999999999999999


Q ss_pred             HHHHHHHHHcCCChHHhH-HHHHHHHHHHHHHHHhhhhccCcccCCCC--C-CceeEeeeccceeEEEEccCCchhHhHH
Q psy3652         113 PLGQLVSLEMGKILAEGI-GEVQEFIDICDYAVGLSRTYSGSILPSER--P-GHVLLENWNPLGVVGIISAFNFPVAVYG  188 (394)
Q Consensus       113 ~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~--~-~~~~~~~~~P~GVV~~I~p~N~P~~~~~  188 (394)
                      +|++++++|+|||..++. .|+..+++.++|++++.++..+...+...  + +...++.++|+|||++|+|||||+.+.+
T Consensus        86 ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~r~P~GVv~~I~PwN~P~~~~~  165 (486)
T cd07140          86 ELATIESLDSGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGKTIPINQARPNRNLTLTKREPIGVCGIVIPWNYPLMMLA  165 (486)
T ss_pred             HHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEeeccceEEEEcCCchHHHHHH
Confidence            999999999999999996 69999999999999988777655433221  1 2235678999999999999999999999


Q ss_pred             HHHHHHh-----------------------------------------------------------------hHHHHHh-
Q psy3652         189 WNAAIAL-----------------------------------------------------------------VGVAVQS-  202 (394)
Q Consensus       189 ~~~~~aL-----------------------------------------------------------------~g~~i~~-  202 (394)
                      +++++||                                                                 +|+.|++ 
T Consensus       166 ~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~  245 (486)
T cd07140         166 WKMAACLAAGNTVVLKPAQVTPLTALKFAELTVKAGFPKGVINILPGSGSLVGQRLSDHPDVRKLGFTGSTPIGKHIMKS  245 (486)
T ss_pred             HHHHHHHHhCCEEEEECCccCcHHHHHHHHHHHHcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHH
Confidence            9999999                                                                 6777754 


Q ss_pred             ----hhhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc-----------------------
Q psy3652         203 ----RFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK-----------------------  255 (394)
Q Consensus       203 ----~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~-----------------------  255 (394)
                          +++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++                       
T Consensus       246 aa~~~l~~v~lElGGk~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rl~V~~~i~~~f~~~l~~~~~~l~~g~p~~  325 (486)
T cd07140         246 CAVSNLKKVSLELGGKSPLIIFADCDMDKAVRMGMSSVFFNKGENCIAAGRLFVEESIHDEFVRRVVEEVKKMKIGDPLD  325 (486)
T ss_pred             HHhcCCCeEEEEcCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhCCccCCCC
Confidence                45789999999999999999999999999999999999999999999999999                       


Q ss_pred             ------------------------------------cCCCCCceecCeEEEcCCCCCcccccccccceEEEEeeC--CHH
Q psy3652         256 ------------------------------------KIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFD--SLD  297 (394)
Q Consensus       256 ------------------------------------~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~--~~~  297 (394)
                                                          ..+..|+|++|||+.+++++|++++||+||||++|++|+  |++
T Consensus       326 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~~~  405 (486)
T cd07140         326 RSTDHGPQNHKAHLDKLVEYCERGVKEGATLVYGGKQVDRPGFFFEPTVFTDVEDHMFIAKEESFGPIMIISKFDDGDVD  405 (486)
T ss_pred             CCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCeeECCEEEeCCCCCChhhhCCCCCCeEEEEEcCCCCHH
Confidence                                                011247899999999999999999999999999999999  699


Q ss_pred             HHHHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEE
Q psy3652         298 EAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTV  377 (394)
Q Consensus       298 eAi~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v  377 (394)
                      |||+++|+++|||++||||+|..++++++  .++++|.|+||+.+ ...+.+||||+|.||+|+++|.+++++|++.|++
T Consensus       406 eai~~aN~~~~gL~a~vft~d~~~a~~~~--~~l~~G~v~iN~~~-~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v  482 (486)
T cd07140         406 GVLQRANDTEYGLASGVFTKDINKALYVS--DKLEAGTVFVNTYN-KTDVAAPFGGFKQSGFGKDLGEEALNEYLKTKTV  482 (486)
T ss_pred             HHHHHHhCCCcCceEEEECCCHHHHHHHH--HhCCcceEEECCCC-CCCCCCCcCCcccCcCCCcchHHHHHHhhcEEEE
Confidence            99999999999999999999999999999  88999999999864 3456789999999999999999999999999999


Q ss_pred             EEe
Q psy3652         378 TIN  380 (394)
Q Consensus       378 ~~~  380 (394)
                      +++
T Consensus       483 ~~~  485 (486)
T cd07140         483 TIE  485 (486)
T ss_pred             EEe
Confidence            875

10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids.

>cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like

Probab=100.00  E-value=2.5e-73  Score=579.40  Aligned_cols=340  Identities=26%  Similarity=0.483  Sum_probs=311.9

Q ss_pred             CceeCCeec--cCCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHH
Q psy3652          38 GVYDGTSWK--ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLG  115 (394)
Q Consensus        38 ~~~i~G~~~--~~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~  115 (394)
                      ++||||+|+  .++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|++++++|++++++|+
T Consensus         2 ~~~I~g~~~~~~~~~~~~v~~P~t~~~~~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la   81 (480)
T cd07559           2 DNFINGEWVAPSKGEYFDNYNPVNGKVLCEIPRSTAEDVDLAVDAAHEAFKTWGKTSVAERANILNKIADRIEENLELLA   81 (480)
T ss_pred             CccCCCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence            579999997  356889999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHcCCChHHhH-HHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHH
Q psy3652         116 QLVSLEMGKILAEGI-GEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIA  194 (394)
Q Consensus       116 ~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~a  194 (394)
                      +++++|+|||+.++. .|+..+++.++++++.++...+...+.. .+...++.++|+|||++|+|||||+.+.++++++|
T Consensus        82 ~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~i~~A  160 (480)
T cd07559          82 VAETLDNGKPIRETLAADIPLAIDHFRYFAGVIRAQEGSLSEID-EDTLSYHFHEPLGVVGQIIPWNFPLLMAAWKLAPA  160 (480)
T ss_pred             HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCC-CCceeEEEEeccceEEEECCCchHHHHHHHHHHHH
Confidence            999999999999996 5999999999999998877655543322 24456778999999999999999999999999999


Q ss_pred             h----------------------------------------------------------------hHHHHHh----hhhh
Q psy3652         195 L----------------------------------------------------------------VGVAVQS----RFGK  206 (394)
Q Consensus       195 L----------------------------------------------------------------~g~~i~~----~~~~  206 (394)
                      |                                                                +|+.|++    +++|
T Consensus       161 LaaGN~VV~KPs~~tp~~~~~l~~l~~~~lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~p  240 (480)
T cd07559         161 LAAGNTVVLKPASQTPLSILVLMELIGDLLPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVGRLIMQYAAENLIP  240 (480)
T ss_pred             HHcCCEEEEECchhhhHHHHHHHHHHHHhCCcCeEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCCc
Confidence            9                                                                6777765    4679


Q ss_pred             hccccCCCCeEEEecCC-----CHHHHHHHHHHHhhCcCCCcccCCceEEEecc--------------------------
Q psy3652         207 LLLELGGNNAIIVNEDA-----DLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK--------------------------  255 (394)
Q Consensus       207 ~~lElgGk~p~iV~~dA-----Dl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~--------------------------  255 (394)
                      +++|||||||+||++||     |++.|++.+++++|.|+||.|++++|||||++                          
T Consensus       241 ~~lElGGk~p~iV~~dA~~~~~Dl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~  320 (480)
T cd07559         241 VTLELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRALVQESIYDEFIERAVERFEAIKVGNPLDPET  320 (480)
T ss_pred             EEeccCCCCeEEEcCCccccccCHHHHHHHHHHHHHhhCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCC
Confidence            99999999999999999     99999999999999999999999999999999                          


Q ss_pred             ---------------------------------cCC----CCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHH
Q psy3652         256 ---------------------------------KID----RPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDE  298 (394)
Q Consensus       256 ---------------------------------~~~----~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~e  298 (394)
                                                       ..+    ..|+|++|||+.+++++|++++||+||||++|++|+|+||
T Consensus       321 ~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~e  400 (480)
T cd07559         321 MMGAQVSKDQLEKILSYVDIGKEEGAEVLTGGERLTLGGLDKGYFYEPTLIKGGNNDMRIFQEEIFGPVLAVITFKDEEE  400 (480)
T ss_pred             cCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCcEECeEEEeCCCCCCcHHhcCCcCceEEEEeeCCHHH
Confidence                                             000    2488999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEE
Q psy3652         299 AITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVT  378 (394)
Q Consensus       299 Ai~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~  378 (394)
                      ||+++|+++|||+++|||+|.+++.+++  .++++|+|+||..+ ...+.+||||+|.||+|+++|.+++++|++.|+++
T Consensus       401 ai~~~n~~~~gL~~~v~t~d~~~a~~~a--~~l~~G~v~iN~~~-~~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~v~  477 (480)
T cd07559         401 AIAIANDTEYGLGGGVWTRDINRALRVA--RGIQTGRVWVNCYH-QYPAHAPFGGYKKSGIGRETHKMMLDHYQQTKNIL  477 (480)
T ss_pred             HHHHHhCCCCCCeEEEECCCHHHHHHHH--HhcCcceEEECCCC-CCCCCCCcCCCccCcCCccChHHHHHHhhceEEEE
Confidence            9999999999999999999999999999  88999999999754 34567999999999999999999999999999998


Q ss_pred             Eec
Q psy3652         379 INH  381 (394)
Q Consensus       379 ~~~  381 (394)
                      +++
T Consensus       478 ~~~  480 (480)
T cd07559         478 VSY  480 (480)
T ss_pred             EeC
Confidence            764

Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences.

>cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like

Probab=100.00  E-value=2.9e-73  Score=579.10  Aligned_cols=340  Identities=29%  Similarity=0.468  Sum_probs=308.9

Q ss_pred             CceeCCeecc--CCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHH-hhcCChhhHHHHHHHHHHHHhhCHHHH
Q psy3652          38 GVYDGTSWKA--NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAA-WAALPAPRRGEIVRQIGDALRHKLVPL  114 (394)
Q Consensus        38 ~~~i~G~~~~--~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~-w~~~~~~~R~~~L~~~a~~l~~~~~~l  114 (394)
                      ++||||+|..  ++.+++++||+||+++++++.++.+|+++++++|++||+. |+++|.++|.++|++++++|++++++|
T Consensus         1 ~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~el   80 (477)
T cd07113           1 GHFIDGRPVAGQSEKRLDITNPATEQVIASVASATEADVDAAVASAWRAFVSAWAKTTPAERGRILLRLADLIEQHGEEL   80 (477)
T ss_pred             CCeECCEEecCCCCCeEeeeCCCCCCEEEEEcCCCHHHHHHHHHHHHHHhHhhhccCCHHHHHHHHHHHHHHHHHCHHHH
Confidence            3699999973  4577999999999999999999999999999999999985 999999999999999999999999999


Q ss_pred             HHHHHHHcCCChHHhHH-HHHHHHHHHHHHHHhhhhccCcccCCCC-----CCceeEeeeccceeEEEEccCCchhHhHH
Q psy3652         115 GQLVSLEMGKILAEGIG-EVQEFIDICDYAVGLSRTYSGSILPSER-----PGHVLLENWNPLGVVGIISAFNFPVAVYG  188 (394)
Q Consensus       115 ~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~-----~~~~~~~~~~P~GVV~~I~p~N~P~~~~~  188 (394)
                      ++++++|+|||..+++. |+..+++.+++++++.+...+...+...     .+...++.++|+|||++|+|||||+.+.+
T Consensus        81 a~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~  160 (477)
T cd07113          81 AQLETLCSGKSIHLSRAFEVGQSANFLRYFAGWATKINGETLAPSIPSMQGERYTAFTRREPVGVVAGIVPWNFSVMIAV  160 (477)
T ss_pred             HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccCCCceEEEEEeecceEEEEcCCChHHHHHH
Confidence            99999999999999975 9999999999999887776554332111     12345678999999999999999999999


Q ss_pred             HHHHHHh----------------------------------------------------------------hHHHHHh--
Q psy3652         189 WNAAIAL----------------------------------------------------------------VGVAVQS--  202 (394)
Q Consensus       189 ~~~~~aL----------------------------------------------------------------~g~~i~~--  202 (394)
                      +++++||                                                                +|+.|++  
T Consensus       161 ~~i~~ALaaGN~VvlKPs~~tp~~~~~l~~~~~~aglP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~a  240 (477)
T cd07113         161 WKIGAALATGCTIVIKPSEFTPLTLLRVAELAKEAGIPDGVLNVVNGKGAVGAQLISHPDVAKVSFTGSVATGKKIGRQA  240 (477)
T ss_pred             HHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHcCcCCCcEEEEecCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHH
Confidence            9999999                                                                6666765  


Q ss_pred             --hhhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc-------------------------
Q psy3652         203 --RFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK-------------------------  255 (394)
Q Consensus       203 --~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~-------------------------  255 (394)
                        +++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++                         
T Consensus       241 a~~~~~~~lElGGkn~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~  320 (477)
T cd07113         241 ASDLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGFLHQGQVCAAPERFYVHRSKFDELVTKLKQALSSFQVGSPMDES  320 (477)
T ss_pred             HhhcCceEeecCCCCeeEECCCCCHHHHHHHHHHHHHhhCCCCCcCCcEEEECHHHHHHHHHHHHHHHHhCCCCCCCCCC
Confidence              56899999999999999999999999999999999999999999999999999                         


Q ss_pred             ----------------------------c------CCCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHH
Q psy3652         256 ----------------------------K------IDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAIT  301 (394)
Q Consensus       256 ----------------------------~------~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~  301 (394)
                                                  .      ....|+|+.|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus       321 ~~~gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~deai~  400 (477)
T cd07113         321 VMFGPLANQPHFDKVCSYLDDARAEGDEIVRGGEALAGEGYFVQPTLVLARSADSRLMREETFGPVVSFVPYEDEEELIQ  400 (477)
T ss_pred             CCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCeeEeCEEEecCCCCChHHhCCCCCCeEEEEEeCCHHHHHH
Confidence                                        0      012388999999999999999999999999999999999999999


Q ss_pred             HHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEEe
Q psy3652         302 WNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTIN  380 (394)
Q Consensus       302 ~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~~  380 (394)
                      ++|+++|||++||||+|.+++++++  .++++|+|+||.++ ...+.+||||+|.||+|+++|.+++++|++.|+++++
T Consensus       401 ~~n~~~~gL~a~v~t~d~~~~~~~~--~~l~~G~v~iN~~~-~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~  476 (477)
T cd07113         401 LINDTPFGLTASVWTNNLSKALRYI--PRIEAGTVWVNMHT-FLDPAVPFGGMKQSGIGREFGSAFIDDYTELKSVMIR  476 (477)
T ss_pred             HHhCCCCCceEEEECCCHHHHHHHH--HhCCcceEEECCCC-CCCCCCCCCCCccccCCccchHHHHHHhhceEEEEEe
Confidence            9999999999999999999999999  88999999999764 3456789999999999999999999999999999875

NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate.

>cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like

Probab=100.00  E-value=2.2e-73  Score=579.64  Aligned_cols=340  Identities=34%  Similarity=0.594  Sum_probs=311.3

Q ss_pred             CceeCCeeccCCCeeeeecCC-CCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHH
Q psy3652          38 GVYDGTSWKANGEIIPSINPS-TGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQ  116 (394)
Q Consensus        38 ~~~i~G~~~~~~~~~~v~nP~-tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~  116 (394)
                      ++||||+|+.++..++++||+ ||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|+++++.|++++++|++
T Consensus         2 ~~~i~g~~~~~~~~~~v~~P~~~~~~i~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~   81 (473)
T cd07097           2 RNYIDGEWVAGGDGEENRNPSDTSDVVGKYARASAEDADAAIAAAAAAFPAWRRTSPEARADILDKAGDELEARKEELAR   81 (473)
T ss_pred             CceECCEEecCCCCceeECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHH
Confidence            579999998554567999999 5999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh-
Q psy3652         117 LVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL-  195 (394)
Q Consensus       117 ~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL-  195 (394)
                      ++++|+|||..+++.|+..+++.++|+++..+++.+...+...++...++.++|+|||++|+|||||+.+.++++++|| 
T Consensus        82 ~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~Pl~~~~~~i~~ALa  161 (473)
T cd07097          82 LLTREEGKTLPEARGEVTRAGQIFRYYAGEALRLSGETLPSTRPGVEVETTREPLGVVGLITPWNFPIAIPAWKIAPALA  161 (473)
T ss_pred             HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEEeeeeEEEEcccChHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999988877665433322345567889999999999999999999999999999 


Q ss_pred             ----------------------------------------------------------------hHHHHHh----hhhhh
Q psy3652         196 ----------------------------------------------------------------VGVAVQS----RFGKL  207 (394)
Q Consensus       196 ----------------------------------------------------------------~g~~i~~----~~~~~  207 (394)
                                                                                      +|+.|++    +++|+
T Consensus       162 aGN~VIlKps~~~p~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~  241 (473)
T cd07097         162 YGNTVVFKPAELTPASAWALVEILEEAGLPAGVFNLVMGSGSEVGQALVEHPDVDAVSFTGSTAVGRRIAAAAAARGARV  241 (473)
T ss_pred             cCCEEEEeCCCCCcHHHHHHHHHHHHcCCCCcceEEeccCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCCcE
Confidence                                                                            6777765    46799


Q ss_pred             ccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc--------------------------------
Q psy3652         208 LLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK--------------------------------  255 (394)
Q Consensus       208 ~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~--------------------------------  255 (394)
                      ++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++                                
T Consensus       242 ~lElGGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli  321 (473)
T cd07097         242 QLEMGGKNPLVVLDDADLDLAVECAVQGAFFSTGQRCTASSRLIVTEGIHDRFVEALVERTKALKVGDALDEGVDIGPVV  321 (473)
T ss_pred             EEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCeeEEEehhHHHHHHHHHHHHHHhCCCCCCCCCCCcCCCCC
Confidence            999999999999999999999999999999999999999999999999                                


Q ss_pred             ---------------------------cCC--CCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcC
Q psy3652         256 ---------------------------KID--RPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEV  306 (394)
Q Consensus       256 ---------------------------~~~--~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~  306 (394)
                                                 ..+  ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|++
T Consensus       322 ~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~  401 (473)
T cd07097         322 SERQLEKDLRYIEIARSEGAKLVYGGERLKRPDEGYYLAPALFAGVTNDMRIAREEIFGPVAAVIRVRDYDEALAIANDT  401 (473)
T ss_pred             CHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCCeEEeeEEeccCCCCChhhhCCCcCceEEEeccCCHHHHHHHHhCC
Confidence                                       001  137899999999999999999999999999999999999999999999


Q ss_pred             CCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCC-CCchHHHHHhhhheeEEEE
Q psy3652         307 KQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGG-RESGSDSWKQYCRRSTVTI  379 (394)
Q Consensus       307 ~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G-~~~g~~~l~~f~~~k~v~~  379 (394)
                      +|||+++|||+|.+.+++++  .++++|+|+||.++....+.+||||+|.||+| +++|.+++++|++.|++.+
T Consensus       402 ~~gL~~~v~t~d~~~a~~~~--~~l~~g~v~iN~~~~~~~~~~PfGG~~~SG~G~~~~g~~~l~~f~~~k~v~~  473 (473)
T cd07097         402 EFGLSAGIVTTSLKHATHFK--RRVEAGVVMVNLPTAGVDYHVPFGGRKGSSYGPREQGEAALEFYTTIKTVYV  473 (473)
T ss_pred             CCCceEEEECCCHHHHHHHH--HhCCcCeEEECCCCCCCCCCCCCCCcccccCcccCCcHHHHHHhhceeEEeC
Confidence            99999999999999999999  88999999999876555567899999999999 8999999999999999853

Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group.

>PRK13252 betaine aldehyde dehydrogenase; Provisional

Probab=100.00  E-value=4e-73  Score=579.62  Aligned_cols=342  Identities=30%  Similarity=0.518  Sum_probs=313.6

Q ss_pred             CCCceeCCeecc--CCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHH
Q psy3652          36 NPGVYDGTSWKA--NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVP  113 (394)
Q Consensus        36 ~~~~~i~G~~~~--~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~  113 (394)
                      ..++||||+|+.  ++.+++++||+||+++++++.++.+|+++++++|++||+.|+.+|.++|.++|++++++|++++++
T Consensus         6 ~~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~e   85 (488)
T PRK13252          6 LQSLYIDGAYVEATSGETFEVINPATGEVLATVQAATPADVEAAVASAKQGQKIWAAMTAMERSRILRRAVDILRERNDE   85 (488)
T ss_pred             cccccCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHH
Confidence            567899999973  568899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHcCCChHHhH-HHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHH
Q psy3652         114 LGQLVSLEMGKILAEGI-GEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAA  192 (394)
Q Consensus       114 l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~  192 (394)
                      |++++++|+|||..+++ .|+..+++.++++++..+.+.++..+.. .+...+++++|+|||++|+|||||+.+.+++++
T Consensus        86 la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~g~~~~~~-~~~~~~~~~~PlGVv~~I~p~N~P~~~~~~~~~  164 (488)
T PRK13252         86 LAALETLDTGKPIQETSVVDIVTGADVLEYYAGLAPALEGEQIPLR-GGSFVYTRREPLGVCAGIGAWNYPIQIACWKSA  164 (488)
T ss_pred             HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccC-CCceEEEEEeeeeEEEEECCCchHHHHHHHHHH
Confidence            99999999999999997 5999999999999998877666543322 234567889999999999999999999999999


Q ss_pred             HHh----------------------------------------------------------------hHHHHHh----hh
Q psy3652         193 IAL----------------------------------------------------------------VGVAVQS----RF  204 (394)
Q Consensus       193 ~aL----------------------------------------------------------------~g~~i~~----~~  204 (394)
                      +||                                                                +|+.|++    .+
T Consensus       165 ~ALaaGN~Vv~Kps~~~p~t~~~l~~~~~~aglP~g~v~~v~g~~~~~~~L~~~~~vd~V~fTGS~~~g~~i~~~aa~~l  244 (488)
T PRK13252        165 PALAAGNAMIFKPSEVTPLTALKLAEIYTEAGLPDGVFNVVQGDGRVGAWLTEHPDIAKVSFTGGVPTGKKVMAAAAASL  244 (488)
T ss_pred             HHHhcCCeEEEeCCccCcHHHHHHHHHHHHcCcCcccEEEEecCcHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcC
Confidence            998                                                                6677765    46


Q ss_pred             hhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc-----------------------------
Q psy3652         205 GKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK-----------------------------  255 (394)
Q Consensus       205 ~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~-----------------------------  255 (394)
                      +|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++                             
T Consensus       245 ~~~~lElgG~~p~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~g  324 (488)
T PRK13252        245 KEVTMELGGKSPLIVFDDADLDRAADIAMLANFYSSGQVCTNGTRVFVQKSIKAAFEARLLERVERIRIGDPMDPATNFG  324 (488)
T ss_pred             CcEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCccc
Confidence            789999999999999999999999999999999999999999999999999                             


Q ss_pred             ------------------------c------CC----CCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHH
Q psy3652         256 ------------------------K------ID----RPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAIT  301 (394)
Q Consensus       256 ------------------------~------~~----~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~  301 (394)
                                              .      .+    ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus       325 pli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~  404 (488)
T PRK13252        325 PLVSFAHRDKVLGYIEKGKAEGARLLCGGERLTEGGFANGAFVAPTVFTDCTDDMTIVREEIFGPVMSVLTFDDEDEVIA  404 (488)
T ss_pred             ccCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCeEEccEEeccCCCCChHhhCCCCCceEEEEeeCCHHHHHH
Confidence                                    0      00    2488999999999999999999999999999999999999999


Q ss_pred             HHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEEec
Q psy3652         302 WNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTINH  381 (394)
Q Consensus       302 ~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~~~  381 (394)
                      ++|+++|||++||||+|.+++.+++  .++++|.|+||+.. ...+.+||||+|.||+|+++|.+++++|++.|+|++++
T Consensus       405 ~~n~~~~gL~a~I~t~d~~~~~~~~--~~l~~G~v~iN~~~-~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~i~~~~  481 (488)
T PRK13252        405 RANDTEYGLAAGVFTADLSRAHRVI--HQLEAGICWINTWG-ESPAEMPVGGYKQSGIGRENGIATLEHYTQIKSVQVEM  481 (488)
T ss_pred             HHhCCCCCCeEEEEeCCHHHHHHHH--HhcCccEEEECCCC-CCCCCCCCCCCccCcCCcCChHHHHHHhcceEEEEEeC
Confidence            9999999999999999999999999  88999999999753 34567899999999999999999999999999998875

>cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like

Probab=100.00  E-value=2.4e-73  Score=579.53  Aligned_cols=339  Identities=29%  Similarity=0.531  Sum_probs=310.1

Q ss_pred             CCCceeCCeecc--CCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHH--hhcCChhhHHHHHHHHHHHHhhCH
Q psy3652          36 NPGVYDGTSWKA--NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAA--WAALPAPRRGEIVRQIGDALRHKL  111 (394)
Q Consensus        36 ~~~~~i~G~~~~--~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~--w~~~~~~~R~~~L~~~a~~l~~~~  111 (394)
                      ..++||||+|+.  ++.+++++||+||+++++++.++.+|+++++++|++||+.  |+.+|.++|.++|++++++|++++
T Consensus         3 ~~~~~i~g~~~~~~~~~~~~v~~P~t~~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~   82 (476)
T cd07142           3 HTKLFINGQFVDAASGKTFPTIDPRNGEVIAHVAEGDAEDVDRAVKAARKAFDEGPWPRMTGYERSRILLRFADLLEKHA   82 (476)
T ss_pred             cccceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhcCCCchhhCCHHHHHHHHHHHHHHHHHhH
Confidence            456899999973  5678999999999999999999999999999999999975  999999999999999999999999


Q ss_pred             HHHHHHHHHHcCCChHHhH-HHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHH
Q psy3652         112 VPLGQLVSLEMGKILAEGI-GEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWN  190 (394)
Q Consensus       112 ~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~  190 (394)
                      ++|++++++|+|||..+++ .|+..+++.+++++++.++..+...+.. .....++.++|+|||++|+|||||+.+.+++
T Consensus        83 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~  161 (476)
T cd07142          83 DELAALETWDNGKPYEQARYAEVPLAARLFRYYAGWADKIHGMTLPAD-GPHHVYTLHEPIGVVGQIIPWNFPLLMFAWK  161 (476)
T ss_pred             HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccC-CCceEEEEEeceeeEEEECCCccHHHHHHHH
Confidence            9999999999999999996 5999999999999998877666544432 2234577899999999999999999999999


Q ss_pred             HHHHh-----------------------------------------------------------------hHHHHHh---
Q psy3652         191 AAIAL-----------------------------------------------------------------VGVAVQS---  202 (394)
Q Consensus       191 ~~~aL-----------------------------------------------------------------~g~~i~~---  202 (394)
                      +++||                                                                 +|+.|++   
T Consensus       162 i~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~G~~v~~~aa  241 (476)
T cd07142         162 VGPALACGNTIVLKPAEQTPLSALLAAKLAAEAGLPDGVLNIVTGFGPTAGAAIASHMDVDKVAFTGSTEVGKIIMQLAA  241 (476)
T ss_pred             HHHHHHcCCEEEEECCCcccHHHHHHHHHHHHcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHH
Confidence            99999                                                                 6777765   


Q ss_pred             --hhhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc-------------------------
Q psy3652         203 --RFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK-------------------------  255 (394)
Q Consensus       203 --~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~-------------------------  255 (394)
                        +++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++                         
T Consensus       242 ~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~  321 (476)
T cd07142         242 KSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHESIYDEFVEKAKARALKRVVGDPFRKG  321 (476)
T ss_pred             HcCCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHhcCCCCCCCCCeeEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCC
Confidence              45799999999999999999999999999999999999999999999999999                         


Q ss_pred             ----------------------------------cCCCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHH
Q psy3652         256 ----------------------------------KIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAIT  301 (394)
Q Consensus       256 ----------------------------------~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~  301 (394)
                                                        ..+..|+|+.|||+.+++++|++++||+||||++|++|+|++|||+
T Consensus       322 ~~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~  401 (476)
T cd07142         322 VEQGPQVDKEQFEKILSYIEHGKEEGATLITGGDRIGSKGYYIQPTIFSDVKDDMKIARDEIFGPVQSILKFKTVDEVIK  401 (476)
T ss_pred             CcCCcCcCHHHHHHHHHHHHHHHhCCCEEEecCCcCCCCCeeEccEEeecCCCCChhhhCCccCceEEEEeeCCHHHHHH
Confidence                                              0012478999999999999999999999999999999999999999


Q ss_pred             HHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEE
Q psy3652         302 WNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVT  378 (394)
Q Consensus       302 ~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~  378 (394)
                      ++|+++|||++||||+|.+++.+++  .++++|+|+||..+ ...+.+||||+|.||+|+++|.+++++|++.|+++
T Consensus       402 ~~n~~~~gL~a~vft~d~~~a~~~~--~~l~~G~v~iN~~~-~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~  475 (476)
T cd07142         402 RANNSKYGLAAGVFSKNIDTANTLS--RALKAGTVWVNCYD-VFDASIPFGGYKMSGIGREKGIYALNNYLQVKAVV  475 (476)
T ss_pred             HHhCCCCCceEEEECCCHHHHHHHH--HhCCcceEEECCCC-CCCCCCCCCCCccCcCCccchHHHHHHhhheeEEe
Confidence            9999999999999999999999999  88999999999754 45667999999999999999999999999999885

Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde.

>cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2

Probab=100.00  E-value=4.6e-73  Score=578.03  Aligned_cols=341  Identities=29%  Similarity=0.448  Sum_probs=311.8

Q ss_pred             CceeCCeecc--CCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHH
Q psy3652          38 GVYDGTSWKA--NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLG  115 (394)
Q Consensus        38 ~~~i~G~~~~--~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~  115 (394)
                      ++||||+|+.  ++.+++++||+||+++++++.++.+|+++++++|++||+.|+.+|.++|.++|++++++|++++++|+
T Consensus         2 ~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~   81 (478)
T cd07085           2 KLFINGEWVESKTTEWLDVYNPATGEVIARVPLATAEEVDAAVAAAKAAFPAWSATPVLKRQQVMFKFRQLLEENLDELA   81 (478)
T ss_pred             CceECCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4799999973  45789999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh
Q psy3652         116 QLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL  195 (394)
Q Consensus       116 ~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL  195 (394)
                      +++++|+|||..+++.|+..+++.+++++...+.+.++..+....+...+..++|+|||++|+|||||+.+.++++++||
T Consensus        82 ~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~AL  161 (478)
T cd07085          82 RLITLEHGKTLADARGDVLRGLEVVEFACSIPHLLKGEYLENVARGIDTYSYRQPLGVVAGITPFNFPAMIPLWMFPMAI  161 (478)
T ss_pred             HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeecccCCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHH
Confidence            99999999999999999999999999999887766665443322344567889999999999999999999999999999


Q ss_pred             ----------------------------------------------------------------hHHHHHh----hhhhh
Q psy3652         196 ----------------------------------------------------------------VGVAVQS----RFGKL  207 (394)
Q Consensus       196 ----------------------------------------------------------------~g~~i~~----~~~~~  207 (394)
                                                                                      +|+.|++    +++|+
T Consensus       162 aaGN~VvlKps~~tp~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~  241 (478)
T cd07085         162 ACGNTFVLKPSERVPGAAMRLAELLQEAGLPDGVLNVVHGGKEAVNALLDHPDIKAVSFVGSTPVGEYIYERAAANGKRV  241 (478)
T ss_pred             hcCCEEEEECCCcCcHHHHHHHHHHHHhCCCCCcEEEEecCHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhhcCCcE
Confidence                                                                            6777764    46799


Q ss_pred             ccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc--------------------------------
Q psy3652         208 LLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK--------------------------------  255 (394)
Q Consensus       208 ~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~--------------------------------  255 (394)
                      ++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++                                
T Consensus       242 ~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~~~l~~G~p~~~~~~~gpli  321 (478)
T cd07085         242 QALGGAKNHAVVMPDADLEQTANALVGAAFGAAGQRCMALSVAVAVGDEADEWIPKLVERAKKLKVGAGDDPGADMGPVI  321 (478)
T ss_pred             EecCCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCc
Confidence            999999999999999999999999999999999999999999999998                                


Q ss_pred             --------------------------cC-C----CCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHh
Q psy3652         256 --------------------------KI-D----RPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNN  304 (394)
Q Consensus       256 --------------------------~~-~----~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n  304 (394)
                                                .. .    .+|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|
T Consensus       322 ~~~~~~~v~~~i~~a~~~Ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~N  401 (478)
T cd07085         322 SPAAKERIEGLIESGVEEGAKLVLDGRGVKVPGYENGNFVGPTILDNVTPDMKIYKEEIFGPVLSIVRVDTLDEAIAIIN  401 (478)
T ss_pred             CHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCcCCCCeEEcCEEEecCCCCChhhhCcCcCCeEEEEEeCCHHHHHHHHh
Confidence                                      00 0    2488999999999999999999999999999999999999999999


Q ss_pred             cCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCC--CCchHHHHHhhhheeEEEEe
Q psy3652         305 EVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGG--RESGSDSWKQYCRRSTVTIN  380 (394)
Q Consensus       305 ~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G--~~~g~~~l~~f~~~k~v~~~  380 (394)
                      +++|||++||||+|.+++++++  .++++|.|+||+++....+.+||||+|.||+|  +++|.+++++|++.|+++++
T Consensus       402 ~~~~gL~a~v~t~d~~~~~~~~--~~l~~G~v~iN~~~~~~~~~~PfgG~k~SG~G~~~~~g~~~~~~~~~~k~v~~~  477 (478)
T cd07085         402 ANPYGNGAAIFTRSGAAARKFQ--REVDAGMVGINVPIPVPLAFFSFGGWKGSFFGDLHFYGKDGVRFYTQTKTVTSR  477 (478)
T ss_pred             CCCCCceEEEECCCHHHHHHHH--HhCCcceEEEcCCCCCCCCCCCCCCcccccCCCCcCChHHHHHHhcceEEEEEe
Confidence            9999999999999999999999  88999999999875555567899999999999  47899999999999999875

Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD.

>TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase

Probab=100.00  E-value=4.3e-73  Score=578.38  Aligned_cols=340  Identities=27%  Similarity=0.457  Sum_probs=310.2

Q ss_pred             CceeCCeeccCCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHH-hhcCChhhHHHHHHHHHHHHhhCHHHHHH
Q psy3652          38 GVYDGTSWKANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAA-WAALPAPRRGEIVRQIGDALRHKLVPLGQ  116 (394)
Q Consensus        38 ~~~i~G~~~~~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~-w~~~~~~~R~~~L~~~a~~l~~~~~~l~~  116 (394)
                      ++||||+|+.++.+++++||+||+++++++.++.+|+++++++|++||+. |+++|.++|.++|++++++|++++++|++
T Consensus         2 ~~~i~g~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~   81 (481)
T TIGR03216         2 RNFINGAFVESGKTFANINPVDGRVIARVHEAGAAEVDAAVAAARAALKGPWGKMTVAERADLLYAVADEIERRFDDFLA   81 (481)
T ss_pred             CceECCEEecCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhHhhHhhCCHHHHHHHHHHHHHHHHHhHHHHHH
Confidence            47999999877788999999999999999999999999999999999997 99999999999999999999999999999


Q ss_pred             HHHHHcCCChHHhH-HHHHHHHHHHHHHHHhhhhccCcccCCCC---CCceeEeeeccceeEEEEccCCchhHhHHHHHH
Q psy3652         117 LVSLEMGKILAEGI-GEVQEFIDICDYAVGLSRTYSGSILPSER---PGHVLLENWNPLGVVGIISAFNFPVAVYGWNAA  192 (394)
Q Consensus       117 ~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~---~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~  192 (394)
                      ++++|+|||..++. .|+..+++.++++++.++.+.+...+...   .+...+..++|+|||++|+|||||+.+.+++++
T Consensus        82 ~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~Pl~~~~~~~~  161 (481)
T TIGR03216        82 AEVADTGKPRSLASHLDIPRGAANFRVFADVVKNAPTECFEMATPDGKGALNYAVRKPLGVVGVISPWNLPLLLMTWKVG  161 (481)
T ss_pred             HHHHHcCCcHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEeccceEEEECCCCcHHHHHHHHHH
Confidence            99999999999996 49999999999999988766554332111   123456789999999999999999999999999


Q ss_pred             HHh------------------------------------------------------------------hHHHHHh----
Q psy3652         193 IAL------------------------------------------------------------------VGVAVQS----  202 (394)
Q Consensus       193 ~aL------------------------------------------------------------------~g~~i~~----  202 (394)
                      +||                                                                  +|+.|++    
T Consensus       162 ~ALaaGN~vvlKPs~~tp~t~~~l~~l~~~aglP~g~~~~v~g~~~~~~~~~l~~~~~vd~v~fTGS~~~G~~i~~~aa~  241 (481)
T TIGR03216       162 PALACGNTVVVKPSEETPGTATLLGEVMNAVGVPKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGETRTGSAIMKAAAD  241 (481)
T ss_pred             HHHHcCCEEEEECCccchHHHHHHHHHHHHcCCCcCceEEEecCChhHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhc
Confidence            999                                                                  5666654    


Q ss_pred             hhhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc---------------------------
Q psy3652         203 RFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK---------------------------  255 (394)
Q Consensus       203 ~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~---------------------------  255 (394)
                      +++|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||++                           
T Consensus       242 ~~~~~~lElgG~n~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~  321 (481)
T TIGR03216       242 GVKPVSFELGGKNAAIVFADCDFDAAVAGILRSAFLNTGQVCLGTERVYVERPIFDRFVAALKARAESLKIGVPDDPATN  321 (481)
T ss_pred             CCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCc
Confidence            46799999999999999999999999999999999999999999999999999                           


Q ss_pred             -------------------------------cCC------CCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHH
Q psy3652         256 -------------------------------KID------RPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDE  298 (394)
Q Consensus       256 -------------------------------~~~------~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~e  298 (394)
                                                     ...      .+|+|++|||+.+++++|++++||+||||++|++|+|+||
T Consensus       322 ~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FgPvl~V~~~~~~~e  401 (481)
T TIGR03216       322 MGPLISAEHRDKVLSYYALAVEEGATVVTGGGVPDFGDALAGGAWVQPTIWTGLPDSARVVTEEIFGPCCHIAPFDSEEE  401 (481)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcccccccCCCCceEccEEEeCCCCCCHHHhCCCCCceEEEEEeCCHHH
Confidence                                           000      2489999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEE
Q psy3652         299 AITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVT  378 (394)
Q Consensus       299 Ai~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~  378 (394)
                      ||+++|+++|||++||||+|.+.+++++  .++++|.|+||+... ..+.+||||+|.||+|+++|.+++++|++.|+++
T Consensus       402 ai~~~n~~~~gL~~~v~t~d~~~~~~~~--~~l~~G~v~iN~~~~-~~~~~PfGG~k~SG~G~~~g~~~l~~f~~~k~v~  478 (481)
T TIGR03216       402 VIALANDTPYGLAASVWTEDLSRAHRVA--RQMEVGIVWVNSWFL-RDLRTPFGGSKLSGIGREGGVHSLEFYTELTNVC  478 (481)
T ss_pred             HHHHHhCCCccceEEEECCCHHHHHHHH--HhcCccEEEECCCCC-CCCCCCcCCcccCcCCcCchHHHHHHhhceEEEE
Confidence            9999999999999999999999999999  889999999998643 3567899999999999999999999999999997


Q ss_pred             Ee
Q psy3652         379 IN  380 (394)
Q Consensus       379 ~~  380 (394)
                      ++
T Consensus       479 ~~  480 (481)
T TIGR03216       479 IK  480 (481)
T ss_pred             Ee
Confidence            75

Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation.

>PRK09457 astD succinylglutamic semialdehyde dehydrogenase; Reviewed

Probab=100.00  E-value=1.2e-72  Score=575.20  Aligned_cols=352  Identities=27%  Similarity=0.451  Sum_probs=314.9

Q ss_pred             CceeCCeec-cCCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHH
Q psy3652          38 GVYDGTSWK-ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQ  116 (394)
Q Consensus        38 ~~~i~G~~~-~~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~  116 (394)
                      .+||||+|+ +++.+++++||+||+++++++.++.+++++++++|++||+.|+++|.++|.++|++++++|++++++|++
T Consensus         2 ~~~i~g~~~~~~~~~~~~~~P~t~~~i~~~~~a~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~   81 (487)
T PRK09457          2 TLWINGDWIAGQGEAFESRNPVSGEVLWQGNDATAAQVDAAVRAARAAFPAWARLSFEERQAIVERFAALLEENKEELAE   81 (487)
T ss_pred             CceECCEEecCCCCEEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHhHHHHHHH
Confidence            379999997 4467899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh-
Q psy3652         117 LVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL-  195 (394)
Q Consensus       117 ~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL-  195 (394)
                      ++++|+|||..+++.|+..+++.+++++.......+..... .++...+++++|+|||++|+|||||+.+..+++++|| 
T Consensus        82 ~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALa  160 (487)
T PRK09457         82 VIARETGKPLWEAATEVTAMINKIAISIQAYHERTGEKRSE-MADGAAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALL  160 (487)
T ss_pred             HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCceecc-CCCceeEEEEeccEEEEEECCCchHHHHHHHHHHHHHH
Confidence            99999999999999999999999999988776655443321 2344567889999999999999999999999999999 


Q ss_pred             ---------------------------------------------------------------hHHHHHhh-----hhhh
Q psy3652         196 ---------------------------------------------------------------VGVAVQSR-----FGKL  207 (394)
Q Consensus       196 ---------------------------------------------------------------~g~~i~~~-----~~~~  207 (394)
                                                                                     +|+.|++.     .+++
T Consensus       161 aGN~VvlKPs~~tp~t~~~l~~l~~~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~~~~~  240 (487)
T PRK09457        161 AGNTVVFKPSELTPWVAELTVKLWQQAGLPAGVLNLVQGGRETGKALAAHPDIDGLLFTGSANTGYLLHRQFAGQPEKIL  240 (487)
T ss_pred             cCCEEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeCCHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhhcCCCcE
Confidence                                                                           77777763     3457


Q ss_pred             ccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc--------------------------------
Q psy3652         208 LLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK--------------------------------  255 (394)
Q Consensus       208 ~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~--------------------------------  255 (394)
                      ++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++                                
T Consensus       241 ~lElGGk~p~IV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~~~~vG~p~~~~~~~~Gp  320 (487)
T PRK09457        241 ALEMGGNNPLVIDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPQGAQGDAFLARLVAVAKRLTVGRWDAEPQPFMGA  320 (487)
T ss_pred             EEecCCCCeEEECCCCCHHHHHHHHHHHHhhccCCCCCCCceEEEeccccHHHHHHHHHHHHhcCcCCCCCcCCCCccCC
Confidence            999999999999999999999999999999999999999999999997                                


Q ss_pred             ------------------------c-----CCCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcC
Q psy3652         256 ------------------------K-----IDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEV  306 (394)
Q Consensus       256 ------------------------~-----~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~  306 (394)
                                              .     .+..|+|+.|||+ +++++|++++||+||||++|++|+|+||||+++|++
T Consensus       321 li~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl-~v~~~~~i~~eE~FGPVl~V~~~~~~deai~~~N~~  399 (487)
T PRK09457        321 VISEQAAQGLVAAQAQLLALGGKSLLEMTQLQAGTGLLTPGII-DVTGVAELPDEEYFGPLLQVVRYDDFDEAIRLANNT  399 (487)
T ss_pred             CcCHHHHHHHHHHHHHHHHCCCEEEeCCCccCCCCeeEecEEe-ccCCCChHHhCCCcCCeEEEEEeCCHHHHHHHHhCC
Confidence                                    0     0123689999999 799999999999999999999999999999999999


Q ss_pred             CCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEEecCC---
Q psy3652         307 KQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTINHGK---  383 (394)
Q Consensus       307 ~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~~~~~---  383 (394)
                      +|||+++|||+|.+.+++++  .++++|+|+||.......+.+||||+|.||+|+++|..+ .+|++.|++++++..   
T Consensus       400 ~~gL~a~v~t~d~~~~~~~~--~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~~~-~~~~~~k~~~~~~~~~~~  476 (487)
T PRK09457        400 RFGLSAGLLSDDREDYDQFL--LEIRAGIVNWNKPLTGASSAAPFGGVGASGNHRPSAYYA-ADYCAYPMASLESDSLTL  476 (487)
T ss_pred             CCCceEEEEcCCHHHHHHHH--HhCCcceEEEECCCCCCCCCCCCCCcccccCCCCCchhH-hhheeeeEEEEecccccC
Confidence            99999999999999999999  889999999998755556678999999999999999555 559999999998611   


Q ss_pred             cccccccccCC
Q psy3652         384 EITLAQGIKFE  394 (394)
Q Consensus       384 ~~~~~~~~~~~  394 (394)
                      ..|.+||++|.
T Consensus       477 ~~~~~~~~~~~  487 (487)
T PRK09457        477 PATLSPGLDFS  487 (487)
T ss_pred             CCCcccCCCCC
Confidence            22889999994

>PLN02467 betaine aldehyde dehydrogenase

Probab=100.00  E-value=1.9e-72  Score=574.51  Aligned_cols=343  Identities=29%  Similarity=0.499  Sum_probs=313.3

Q ss_pred             CCCceeCCeecc--CCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHH-----HHhhcCChhhHHHHHHHHHHHHh
Q psy3652          36 NPGVYDGTSWKA--NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAY-----AAWAALPAPRRGEIVRQIGDALR  108 (394)
Q Consensus        36 ~~~~~i~G~~~~--~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~-----~~w~~~~~~~R~~~L~~~a~~l~  108 (394)
                      ..++||||+|+.  ++.+++++||+||+++++++.++.+|+++|+++|++||     +.|+.+|.++|.++|++++++|+
T Consensus         7 ~~~~~I~g~~~~~~~~~~~~v~~P~t~~~i~~~~~~~~~dv~~av~~A~~a~~~~~~~~W~~~~~~~R~~~L~~~a~~l~   86 (503)
T PLN02467          7 RRQLFIGGEWREPVLGKRIPVVNPATEETIGDIPAATAEDVDAAVEAARKAFKRNKGKDWARTTGAVRAKYLRAIAAKIT   86 (503)
T ss_pred             ccCceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcccchhhcCCHHHHHHHHHHHHHHHH
Confidence            346899999973  56889999999999999999999999999999999999     89999999999999999999999


Q ss_pred             hCHHHHHHHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCcccC-CC--CCCceeEeeeccceeEEEEccCCchhH
Q psy3652         109 HKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILP-SE--RPGHVLLENWNPLGVVGIISAFNFPVA  185 (394)
Q Consensus       109 ~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~-~~--~~~~~~~~~~~P~GVV~~I~p~N~P~~  185 (394)
                      +++++|++++++|+|||..+++.|+..+++.++|+++.++++.++... ..  ..+...+++++|+|||++|+|||||+.
T Consensus        87 ~~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~  166 (503)
T PLN02467         87 ERKSELAKLETLDCGKPLDEAAWDMDDVAGCFEYYADLAEALDAKQKAPVSLPMETFKGYVLKEPLGVVGLITPWNYPLL  166 (503)
T ss_pred             HhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEecCceEEEECCCChHHH
Confidence            999999999999999999999999999999999999988887665321 11  113346788999999999999999999


Q ss_pred             hHHHHHHHHh-----------------------------------------------------------------hHHHH
Q psy3652         186 VYGWNAAIAL-----------------------------------------------------------------VGVAV  200 (394)
Q Consensus       186 ~~~~~~~~aL-----------------------------------------------------------------~g~~i  200 (394)
                      +.++++++||                                                                 +|+.|
T Consensus       167 ~~~~~i~~ALaaGN~Vv~Kps~~tp~~~~~l~~~~~eag~P~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v  246 (503)
T PLN02467        167 MATWKVAPALAAGCTAVLKPSELASVTCLELADICREVGLPPGVLNVVTGLGTEAGAPLASHPGVDKIAFTGSTATGRKI  246 (503)
T ss_pred             HHHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHHcCcCcCeEEEEeCCchhHHHHHhcCCCCCEEEEECCHHHHHHH
Confidence            9999999999                                                                 67777


Q ss_pred             Hh----hhhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc---------------------
Q psy3652         201 QS----RFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK---------------------  255 (394)
Q Consensus       201 ~~----~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~---------------------  255 (394)
                      ++    ++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++                     
T Consensus       247 ~~~aa~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p  326 (503)
T PLN02467        247 MTAAAQMVKPVSLELGGKSPIIVFDDVDLDKAVEWAMFGCFWTNGQICSATSRLLVHERIASEFLEKLVKWAKNIKISDP  326 (503)
T ss_pred             HHHHhccCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhhcCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCC
Confidence            65    46799999999999999999999999999999999999999999999999998                     


Q ss_pred             --------------------------------c-----CC---CCCceecCeEEEcCCCCCcccccccccceEEEEeeCC
Q psy3652         256 --------------------------------K-----ID---RPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDS  295 (394)
Q Consensus       256 --------------------------------~-----~~---~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~  295 (394)
                                                      .     ..   ..|+|+.|||+.+++++|++++||+||||++|++|+|
T Consensus       327 ~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~vl~gG~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~  406 (503)
T PLN02467        327 LEEGCRLGPVVSEGQYEKVLKFISTAKSEGATILCGGKRPEHLKKGFFIEPTIITDVTTSMQIWREEVFGPVLCVKTFST  406 (503)
T ss_pred             CCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCeEEeeEEEeCCCCCChHhhCCCCCceEEEEeeCC
Confidence                                            0     00   1478999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhhee
Q psy3652         296 LDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRS  375 (394)
Q Consensus       296 ~~eAi~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k  375 (394)
                      .||||+++|+++|||+++|||+|.+.+.+++  .++++|.|+||+.+. ....+||||+|.||+|+++|.+++++|++.|
T Consensus       407 ~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~--~~l~~G~v~iN~~~~-~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k  483 (503)
T PLN02467        407 EDEAIELANDSHYGLAGAVISNDLERCERVS--EAFQAGIVWINCSQP-CFCQAPWGGIKRSGFGRELGEWGLENYLSVK  483 (503)
T ss_pred             HHHHHHHHhCCCCCceEEEECCCHHHHHHHH--HhCCcceEEECCCCC-CCCCCCcCCcccCcCCCcchHHHHHHhhCeE
Confidence            9999999999999999999999999999999  889999999998643 4567899999999999999999999999999


Q ss_pred             EEEEec
Q psy3652         376 TVTINH  381 (394)
Q Consensus       376 ~v~~~~  381 (394)
                      ++.+.+
T Consensus       484 ~i~~~~  489 (503)
T PLN02467        484 QVTKYI  489 (503)
T ss_pred             EEEEec
Confidence            999864

>PLN00412 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-72  Score=573.95  Aligned_cols=346  Identities=27%  Similarity=0.413  Sum_probs=311.8

Q ss_pred             CCCCceeCCeecc--CCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHH
Q psy3652          35 VNPGVYDGTSWKA--NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLV  112 (394)
Q Consensus        35 ~~~~~~i~G~~~~--~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~  112 (394)
                      ...++||||+|+.  ++.+++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|+++++
T Consensus        14 ~~~~~~i~G~~~~~~~~~~~~~~~P~t~~~i~~~~~a~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~   93 (496)
T PLN00412         14 DVYKYYADGEWRTSSSGKSVAITNPSTRKTQYKVQACTQEEVNKAMESAKAAQKAWAKTPLWKRAELLHKAAAILKEHKA   93 (496)
T ss_pred             cccCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHH
Confidence            3567899999973  56789999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccC--cccC-----CCCCCceeEeeeccceeEEEEccCCchhH
Q psy3652         113 PLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSG--SILP-----SERPGHVLLENWNPLGVVGIISAFNFPVA  185 (394)
Q Consensus       113 ~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~--~~~~-----~~~~~~~~~~~~~P~GVV~~I~p~N~P~~  185 (394)
                      +|++++++|+|||..++..|+..+++.++|++..+.++.+  ....     ....+...+++++|+|||++|+|||||+.
T Consensus        94 el~~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~  173 (496)
T PLN00412         94 PIAECLVKEIAKPAKDAVTEVVRSGDLISYTAEEGVRILGEGKFLVSDSFPGNERNKYCLTSKIPLGVVLAIPPFNYPVN  173 (496)
T ss_pred             HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCccCCceeEEEEecceEEEEECCCCchHH
Confidence            9999999999999999999999999999999877655432  1211     11112345678999999999999999999


Q ss_pred             hHHHHHHHHh----------------------------------------------------------------hHHHHH
Q psy3652         186 VYGWNAAIAL----------------------------------------------------------------VGVAVQ  201 (394)
Q Consensus       186 ~~~~~~~~aL----------------------------------------------------------------~g~~i~  201 (394)
                      +.++++++||                                                                +|+.++
T Consensus       174 ~~~~~i~~ALaaGN~VIlKPs~~t~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~g~~v~  253 (496)
T PLN00412        174 LAVSKIAPALIAGNAVVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGGDTGIAIS  253 (496)
T ss_pred             HHHHHHHHHHHcCCEEEEECCccCcHHHHHHHHHHHHhCCCcccEEEEecCchHHHHHHhcCCCcCEEEEeChHHHHHHH
Confidence            9999999999                                                                555555


Q ss_pred             h--hhhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc------------------------
Q psy3652         202 S--RFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK------------------------  255 (394)
Q Consensus       202 ~--~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~------------------------  255 (394)
                      +  .++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++                        
T Consensus       254 ~~a~~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~  333 (496)
T PLN00412        254 KKAGMVPLQMELGGKDACIVLEDADLDLAAANIIKGGFSYSGQRCTAVKVVLVMESVADALVEKVNAKVAKLTVGPPEDD  333 (496)
T ss_pred             HHhCCCcEEEEcCCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEcHHHHHHHHHHHHHHHHhCccCCCccc
Confidence            4  45799999999999999999999999999999999999999999999999999                        


Q ss_pred             -------------------------------cCCCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHh
Q psy3652         256 -------------------------------KIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNN  304 (394)
Q Consensus       256 -------------------------------~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n  304 (394)
                                                     ..+..|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|
T Consensus       334 ~~~gp~i~~~~~~~v~~~i~~a~~~Ga~~l~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~deai~~an  413 (496)
T PLN00412        334 CDITPVVSESSANFIEGLVMDAKEKGATFCQEWKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCN  413 (496)
T ss_pred             CCcCCCcCHHHHHHHHHHHHHHHHCCCEEEecCCCCCeEEecEEEeCCCCCCHHHhCcCCCCeEEEEEeCCHHHHHHHHh
Confidence                                           0012588999999999999999999999999999999999999999999


Q ss_pred             cCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEEecC
Q psy3652         305 EVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTINHG  382 (394)
Q Consensus       305 ~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~~~~  382 (394)
                      +++|||++||||+|.+++.+++  .++++|.|+||++.....+.+||||+|.||+|+++|.+++++|++.|+++++++
T Consensus       414 ~~~~gL~a~v~t~d~~~a~~~~--~~l~~G~v~vN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~i~~~~~  489 (496)
T PLN00412        414 ASNFGLQGCVFTRDINKAILIS--DAMETGTVQINSAPARGPDHFPFQGLKDSGIGSQGITNSINMMTKVKSTVINLP  489 (496)
T ss_pred             CCCCCceEEEEcCCHHHHHHHH--HhCCcceEEEcCCCCCCCCCCCCCCccccccCCCChHHHHHHhcceEEEEEecC
Confidence            9999999999999999999999  889999999998754444578999999999999999999999999999998763

>TIGR02299 HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase

Probab=100.00  E-value=2.5e-72  Score=573.95  Aligned_cols=339  Identities=28%  Similarity=0.504  Sum_probs=310.9

Q ss_pred             CceeCCeecc--CCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHH
Q psy3652          38 GVYDGTSWKA--NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLG  115 (394)
Q Consensus        38 ~~~i~G~~~~--~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~  115 (394)
                      ++||||+|+.  ++.+++++||+||+++++++.++.+|+++++++|++||+.|+.+|.++|.++|++++++|++++++|+
T Consensus         2 ~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l~   81 (488)
T TIGR02299         2 GHFIDGEFVPSESGETFETLSPATNEVLGSVARGGAADVDRAAKAAKEAFKRWAELKAAERKRYLHKIADLIEQHADEIA   81 (488)
T ss_pred             CccCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence            4699999973  46789999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhh-hccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHH
Q psy3652         116 QLVSLEMGKILAEGIGEVQEFIDICDYAVGLSR-TYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIA  194 (394)
Q Consensus       116 ~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~-~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~a  194 (394)
                      +++++|+|||..+++.|+..+++.++++++.++ .+.+...+..  ....++.++|+|||++|+|||||+.+.++++++|
T Consensus        82 ~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~A  159 (488)
T TIGR02299        82 VLECLDCGQPLRQTRQQVIRAAENFRFFADKCEEAMDGRTYPVD--THLNYTVRVPVGPVGLITPWNAPFMLSTWKIAPA  159 (488)
T ss_pred             HHHHHHcCCcHHHHHHHHHHHHHHHHHHHHhHHHhcCCccccCC--CceEEEEEEecceEEEECCCccHHHHHHHHHHHH
Confidence            999999999999999999999999999998877 3444443322  3445778999999999999999999999999999


Q ss_pred             h-----------------------------------------------------------------hHHHHHh----hhh
Q psy3652         195 L-----------------------------------------------------------------VGVAVQS----RFG  205 (394)
Q Consensus       195 L-----------------------------------------------------------------~g~~i~~----~~~  205 (394)
                      |                                                                 +|+.|++    +++
T Consensus       160 LaaGN~VIlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~aa~~l~  239 (488)
T TIGR02299       160 LAFGNTVVLKPAEWSPLTAARLAEIAKEAGLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFTGETATGSIIMRNGADTLK  239 (488)
T ss_pred             HHcCCEEEEECchhchHHHHHHHHHHHHcCcChhheeEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHHHhcCC
Confidence            9                                                                 7777765    568


Q ss_pred             hhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc------------------------------
Q psy3652         206 KLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK------------------------------  255 (394)
Q Consensus       206 ~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~------------------------------  255 (394)
                      |+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++                              
T Consensus       240 ~~~lElGGknp~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~l~~g~p~~~~~~~Gp  319 (488)
T TIGR02299       240 RFSMELGGKSPVIVFDDADLERALDAVVFMIFSFNGERCTASSRLLVQESIAEDFVEKLVERVRAIRVGHPLDPETEVGP  319 (488)
T ss_pred             eEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHHHHHHHHHHHHHhhCCcCCCCCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999998                              


Q ss_pred             ------------------------c----C-C-------CCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHH
Q psy3652         256 ------------------------K----I-D-------RPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEA  299 (394)
Q Consensus       256 ------------------------~----~-~-------~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eA  299 (394)
                                              .    . +       ..|+|++|||+.+++++|++++||+||||++|++|+|+|||
T Consensus       320 li~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~ea  399 (488)
T TIGR02299       320 LIHPEHLAKVLGYVEAAEKEGATILVGGERAPTFRGEDLGRGNYVLPTVFTGADNHMRIAQEEIFGPVLTVIPFKDEEEA  399 (488)
T ss_pred             CcCHHHHHHHHHHHHHHHhCCCEEEeCCccCcccccccCCCCeEEccEEEecCCCCCchhhCCCcCCeEEEEeeCCHHHH
Confidence                                    0    0 0       13789999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEE
Q psy3652         300 ITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTI  379 (394)
Q Consensus       300 i~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~  379 (394)
                      |+++|+++|||++||||+|.+.+++++  .++++|.|+||.... ..+.+||||+|.||+|+++|.+++++|++.|++++
T Consensus       400 i~~~N~~~~gL~a~v~t~d~~~a~~~~--~~l~~G~v~iN~~~~-~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~i~~  476 (488)
T TIGR02299       400 IEKANDTRYGLAGYVWTNDVGRAHRVA--LALEAGMIWVNSQNV-RHLPTPFGGVKASGIGREGGTYSFDFYTETKNVAL  476 (488)
T ss_pred             HHHHhCCCCCceEEEEcCCHHHHHHHH--HhCCcCeEEECCCCC-CCCCCCCCCCccCcCCccchHHHHHHHhceEEEEE
Confidence            999999999999999999999999999  889999999997543 45678999999999999999999999999999999


Q ss_pred             ec
Q psy3652         380 NH  381 (394)
Q Consensus       380 ~~  381 (394)
                      ++
T Consensus       477 ~~  478 (488)
T TIGR02299       477 AL  478 (488)
T ss_pred             ec
Confidence            86

This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring.

>PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-72  Score=572.43  Aligned_cols=342  Identities=29%  Similarity=0.494  Sum_probs=311.8

Q ss_pred             CCceeCCeec-cCCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHH
Q psy3652          37 PGVYDGTSWK-ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLG  115 (394)
Q Consensus        37 ~~~~i~G~~~-~~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~  115 (394)
                      .++||||+|+ .++.+++++||+||+++++++.++.+|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|+
T Consensus         3 ~~~~i~g~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la   82 (475)
T PRK13473          3 TKLLINGELVAGEGEKQPVYNPATGEVLAEIAEASAAQVDAAVAAADAAFPEWSQTTPKERAEALLKLADAIEENADEFA   82 (475)
T ss_pred             ccceECCEEecCCCCEEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3579999997 466889999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHcCCChHHhH-HHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHH
Q psy3652         116 QLVSLEMGKILAEGI-GEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIA  194 (394)
Q Consensus       116 ~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~a  194 (394)
                      +++++|+|||..++. .|+..+++.++++++.++.+.+...+....+...+++++|+|||++|+|||||+.+.++++++|
T Consensus        83 ~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~i~~A  162 (475)
T PRK13473         83 RLESLNCGKPLHLALNDEIPAIVDVFRFFAGAARCLEGKAAGEYLEGHTSMIRRDPVGVVASIAPWNYPLMMAAWKLAPA  162 (475)
T ss_pred             HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceeEEEEccCChHHHHHHHHHHHH
Confidence            999999999999986 5999999999999988877766543322223445778999999999999999999999999999


Q ss_pred             h----------------------------------------------------------------hHHHHHh----hhhh
Q psy3652         195 L----------------------------------------------------------------VGVAVQS----RFGK  206 (394)
Q Consensus       195 L----------------------------------------------------------------~g~~i~~----~~~~  206 (394)
                      |                                                                +|+.|++    +++|
T Consensus       163 LaaGN~VIlKps~~~p~~~~~l~~~~~~alP~gv~~~v~g~~~~~~~~l~~~~~vd~V~fTGs~~~g~~i~~~aa~~~~~  242 (475)
T PRK13473        163 LAAGNTVVLKPSEITPLTALKLAELAADILPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGSIATGKHVLSAAADSVKR  242 (475)
T ss_pred             HhcCCEEEEECCCCChHHHHHHHHHHHHhCCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCc
Confidence            9                                                                6666664    4578


Q ss_pred             hccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc-------------------------------
Q psy3652         207 LLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK-------------------------------  255 (394)
Q Consensus       207 ~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~-------------------------------  255 (394)
                      +++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||++                               
T Consensus       243 ~~lElgG~~p~iV~~dADld~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~gpl  322 (475)
T PRK13473        243 THLELGGKAPVIVFDDADLDAVVEGIRTFGYYNAGQDCTAACRIYAQRGIYDDLVAKLAAAVATLKVGDPDDEDTELGPL  322 (475)
T ss_pred             EEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCC
Confidence            9999999999999999999999999999999999999999999999999                               


Q ss_pred             -------------------c----------CCCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcC
Q psy3652         256 -------------------K----------IDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEV  306 (394)
Q Consensus       256 -------------------~----------~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~  306 (394)
                                         .          .+..|+|+.|||+.++++++.+++||+||||++|++|+|+||||+++|++
T Consensus       323 i~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~N~~  402 (475)
T PRK13473        323 ISAAHRDRVAGFVERAKALGHIRVVTGGEAPDGKGYYYEPTLLAGARQDDEIVQREVFGPVVSVTPFDDEDQAVRWANDS  402 (475)
T ss_pred             CCHHHHHHHHHHHHHHHHcCCeEEEECCCcCCCCceeEcCEEEecCCCCChhhhCCccCCeEEEeccCCHHHHHHHHhCC
Confidence                               0          00137899999999999999999999999999999999999999999999


Q ss_pred             CCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEEec
Q psy3652         307 KQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTINH  381 (394)
Q Consensus       307 ~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~~~  381 (394)
                      +|||+++|||+|.+++.+++  .++++|.|+||++.. ..+.+||||+|.||+|+++|.+++++|++.|++++++
T Consensus       403 ~~gL~a~v~t~d~~~~~~~~--~~l~~G~v~iN~~~~-~~~~~PfGG~k~SG~G~~~g~~~~~~~t~~k~i~~~~  474 (475)
T PRK13473        403 DYGLASSVWTRDVGRAHRVS--ARLQYGCTWVNTHFM-LVSEMPHGGQKQSGYGKDMSLYGLEDYTVVRHVMVKH  474 (475)
T ss_pred             CCCceEEEECCCHHHHHHHH--HhCCcceEEECCCCC-CCCCCCCCCccccccCccchHHHHHHHhceEEEEEec
Confidence            99999999999999999999  889999999998653 4567899999999999999999999999999998875

>cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like

Probab=100.00  E-value=4.1e-72  Score=570.89  Aligned_cols=338  Identities=27%  Similarity=0.428  Sum_probs=306.0

Q ss_pred             CceeCCeec--cCCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHH
Q psy3652          38 GVYDGTSWK--ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLG  115 (394)
Q Consensus        38 ~~~i~G~~~--~~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~  115 (394)
                      ++||||+|+  .++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|++++++|++++++|+
T Consensus         2 ~~~i~g~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la   81 (479)
T cd07116           2 DNFIGGEWVAPVKGEYFDNITPVTGKVFCEVPRSTAEDIELALDAAHAAKEAWGKTSVAERANILNKIADRMEANLEMLA   81 (479)
T ss_pred             CceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence            579999997  356889999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHcCCChHHhH-HHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHH
Q psy3652         116 QLVSLEMGKILAEGI-GEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIA  194 (394)
Q Consensus       116 ~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~a  194 (394)
                      ++++.|+|||..++. .|+..+++.++++++.++...+...+. ..+...++.++|+|||++|+|||||+.+.++++++|
T Consensus        82 ~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~A  160 (479)
T cd07116          82 VAETWDNGKPVRETLAADIPLAIDHFRYFAGCIRAQEGSISEI-DENTVAYHFHEPLGVVGQIIPWNFPLLMATWKLAPA  160 (479)
T ss_pred             HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhHHHcCCeeecC-CCCceEEEEEeccceEEEECCCchHHHHHHHHHHHH
Confidence            999999999999997 599999999999999887765544332 233456788999999999999999999999999999


Q ss_pred             h----------------------------------------------------------------hHHHHHh----hhhh
Q psy3652         195 L----------------------------------------------------------------VGVAVQS----RFGK  206 (394)
Q Consensus       195 L----------------------------------------------------------------~g~~i~~----~~~~  206 (394)
                      |                                                                +|+.|++    +++|
T Consensus       161 LaaGN~VV~KPs~~tp~~~~~l~~l~~~alP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~~p  240 (479)
T cd07116         161 LAAGNCVVLKPAEQTPASILVLMELIGDLLPPGVVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTGRLIMQYASENIIP  240 (479)
T ss_pred             HHcCCEEEEECCCCChHHHHHHHHHHHHHCCcCcEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHcCCCe
Confidence            9                                                                6777665    4679


Q ss_pred             hccccCCCCeEEEecC------CCHHHHHHHHHHHhhCcCCCcccCCceEEEecc-------------------------
Q psy3652         207 LLLELGGNNAIIVNED------ADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK-------------------------  255 (394)
Q Consensus       207 ~~lElgGk~p~iV~~d------ADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~-------------------------  255 (394)
                      +++|||||||+||++|      ||++.|++.++++. +|+||.|++++|||||++                         
T Consensus       241 ~~lElGGk~p~iV~~da~~~~~adl~~A~~~i~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~  319 (479)
T cd07116         241 VTLELGGKSPNIFFADVMDADDAFFDKALEGFVMFA-LNQGEVCTCPSRALIQESIYDRFMERALERVKAIKQGNPLDTE  319 (479)
T ss_pred             EEEECCCCCeEEEecCcccccccCHHHHHHHHHHHH-hcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCC
Confidence            9999999999999998      79999999999865 589999999999999999                         


Q ss_pred             ----------------------------cC-----C-----CCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHH
Q psy3652         256 ----------------------------KI-----D-----RPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLD  297 (394)
Q Consensus       256 ----------------------------~~-----~-----~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~  297 (394)
                                                  .+     .     ..|+|+.|||+.+++ +|++++||+||||++|++|+|+|
T Consensus       320 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~-~~~~~~eE~FGPVl~v~~~~~~~  398 (479)
T cd07116         320 TMIGAQASLEQLEKILSYIDIGKEEGAEVLTGGERNELGGLLGGGYYVPTTFKGGN-KMRIFQEEIFGPVLAVTTFKDEE  398 (479)
T ss_pred             CcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeeecCeEEccCC-CChhhhcCCcCceEEEEEeCCHH
Confidence                                        00     0     147899999998875 99999999999999999999999


Q ss_pred             HHHHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEE
Q psy3652         298 EAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTV  377 (394)
Q Consensus       298 eAi~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v  377 (394)
                      |||+++|+++|||+++|||+|.+++++++  .++++|.|+||+++ ...+.+||||+|.||+|+++|.+++++|++.|++
T Consensus       399 eai~~aN~~~~gLsa~v~t~d~~~a~~~~--~~l~~G~v~iN~~~-~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~~  475 (479)
T cd07116         399 EALEIANDTLYGLGAGVWTRDGNTAYRMG--RGIQAGRVWTNCYH-LYPAHAAFGGYKQSGIGRENHKMMLDHYQQTKNL  475 (479)
T ss_pred             HHHHHHhCCcccceEEEEcCCHHHHHHHH--HhcCcCeEEECCCC-CCCCCCCcCCCccCcCCccChHHHHHHhhceEEE
Confidence            99999999999999999999999999999  88999999999764 3456789999999999999999999999999999


Q ss_pred             EEec
Q psy3652         378 TINH  381 (394)
Q Consensus       378 ~~~~  381 (394)
                      +++|
T Consensus       476 ~~~~  479 (479)
T cd07116         476 LVSY  479 (479)
T ss_pred             EEeC
Confidence            8754

Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression.

>cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA

Probab=100.00  E-value=4.9e-72  Score=574.07  Aligned_cols=345  Identities=30%  Similarity=0.494  Sum_probs=315.4

Q ss_pred             CCCCCceeCCeeccCCCeeeeecCCC-CCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHH
Q psy3652          34 SVNPGVYDGTSWKANGEIIPSINPST-GETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLV  112 (394)
Q Consensus        34 ~~~~~~~i~G~~~~~~~~~~v~nP~t-g~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~  112 (394)
                      ++..++||||+|+.++.+++++||+| |+++++++.++.+|+++++++|++||+.|+.+|.++|.++|++++++|+++++
T Consensus        30 ~~~~~~~i~g~~~~~~~~~~v~~P~t~~~~i~~~~~a~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~  109 (512)
T cd07124          30 GREYPLVIGGKEVRTEEKIESRNPADPSEVLGTVQKATKEEAEAAVQAARAAFPTWRRTPPEERARLLLRAAALLRRRRF  109 (512)
T ss_pred             ccccceeECCEEecCCCeEEeECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHH
Confidence            45678999999987678899999998 99999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHH
Q psy3652         113 PLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAA  192 (394)
Q Consensus       113 ~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~  192 (394)
                      +|++++++|+|||..+++.|+..+++.++|+++.++++.+...+. ..+...++.++|+|||++|+|||||+.+.+++++
T Consensus       110 ~la~~~~~e~Gk~~~ea~~ev~~~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~i~  188 (512)
T cd07124         110 ELAAWMVLEVGKNWAEADADVAEAIDFLEYYAREMLRLRGFPVEM-VPGEDNRYVYRPLGVGAVISPWNFPLAILAGMTT  188 (512)
T ss_pred             HHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccC-CCCceeEEEEecceEEEEECCCChHHHHHHHHHH
Confidence            999999999999999999999999999999999988875544332 2244567889999999999999999999999999


Q ss_pred             HHh-----------------------------------------------------------------hHHHHHh-----
Q psy3652         193 IAL-----------------------------------------------------------------VGVAVQS-----  202 (394)
Q Consensus       193 ~aL-----------------------------------------------------------------~g~~i~~-----  202 (394)
                      +||                                                                 +|+.|++     
T Consensus       189 ~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~~  268 (512)
T cd07124         189 AALVTGNTVVLKPAEDTPVIAAKLVEILEEAGLPPGVVNFLPGPGEEVGDYLVEHPDVRFIAFTGSREVGLRIYERAAKV  268 (512)
T ss_pred             HHHHcCCEEEEECCccccHHHHHHHHHHHHhCcCCCceEEeccCchHHHHHHhcCCCCCEEEEeCchHHHHHHHHHHhcc
Confidence            999                                                                 6777664     


Q ss_pred             -----hhhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc----------------------
Q psy3652         203 -----RFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK----------------------  255 (394)
Q Consensus       203 -----~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~----------------------  255 (394)
                           +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++                      
T Consensus       269 ~~~~~~l~~~~lElgGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~  348 (512)
T cd07124         269 QPGQKWLKRVIAEMGGKNAIIVDEDADLDEAAEGIVRSAFGFQGQKCSACSRVIVHESVYDEFLERLVERTKALKVGDPE  348 (512)
T ss_pred             cccccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCccccceEEEEcHHHHHHHHHHHHHHHHhCCCCCCC
Confidence                 36799999999999999999999999999999999999999999999999999                      


Q ss_pred             -----------------------------------cCCC---CCceecCeEEEcCCCCCcccccccccceEEEEeeCCHH
Q psy3652         256 -----------------------------------KIDR---PGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLD  297 (394)
Q Consensus       256 -----------------------------------~~~~---~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~  297 (394)
                                                         ....   .|+|+.|||+.+++++|++++||+||||++|++|+|+|
T Consensus       349 d~~~~~Gpli~~~~~~~v~~~i~~a~~g~~vl~gG~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~~  428 (512)
T cd07124         349 DPEVYMGPVIDKGARDRIRRYIEIGKSEGRLLLGGEVLELAAEGYFVQPTIFADVPPDHRLAQEEIFGPVLAVIKAKDFD  428 (512)
T ss_pred             CCCCcccCCcCHHHHHHHHHHHHHHHhCCEEEecCccCCCCCCCceEcCEEEecCCCCChHHhCCCcCCeEEEEecCCHH
Confidence                                               0001   58899999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCC-CCCCCccCCCCCCCC-CCchHHHHHhhhhee
Q psy3652         298 EAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGA-EIGGAFGGEKYTGGG-RESGSDSWKQYCRRS  375 (394)
Q Consensus       298 eAi~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~-~~~~pfGG~~~SG~G-~~~g~~~l~~f~~~k  375 (394)
                      |||+++|+++|||++||||+|.+.+.+++  .++++|+|+||...... .+.+||||+|.||+| +++|.+++++|++.|
T Consensus       429 eai~~~n~~~~gL~~~v~t~d~~~~~~~~--~~l~~G~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~~~~~t~~k  506 (512)
T cd07124         429 EALEIANDTEYGLTGGVFSRSPEHLERAR--REFEVGNLYANRKITGALVGRQPFGGFKMSGTGSKAGGPDYLLQFMQPK  506 (512)
T ss_pred             HHHHHHhCCCCCCeEEEEcCCHHHHHHHH--HhCCcceEEECCCCCCCCCCCCCCCccccccCCCccCcHHHHHHhccEE
Confidence            99999999999999999999999999999  88999999999865333 356899999999999 788999999999999


Q ss_pred             EEEEec
Q psy3652         376 TVTINH  381 (394)
Q Consensus       376 ~v~~~~  381 (394)
                      ++++++
T Consensus       507 ~v~~~~  512 (512)
T cd07124         507 TVTENF  512 (512)
T ss_pred             EEEEeC
Confidence            998764

Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis.

>TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative

Probab=100.00  E-value=6.3e-72  Score=572.82  Aligned_cols=345  Identities=27%  Similarity=0.465  Sum_probs=313.1

Q ss_pred             CCCCceeCCeeccCCCeeeeecCC-CCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHH
Q psy3652          35 VNPGVYDGTSWKANGEIIPSINPS-TGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVP  113 (394)
Q Consensus        35 ~~~~~~i~G~~~~~~~~~~v~nP~-tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~  113 (394)
                      ...++||||+|+.++.+++++||+ ||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|++++++|++++++
T Consensus        31 ~~~~~~i~g~~~~~~~~~~~~~P~~~~~~i~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~  110 (511)
T TIGR01237        31 KTYPLYINGEYVETENKIDSINPCDPSEVVGKVGKASVEQAEHALQIAKKAFEAWKKTPVRERAGILRKAAAIMERRRHE  110 (511)
T ss_pred             cccceeECCEEecCCCeEEeECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHH
Confidence            456789999998667789999999 4999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHH
Q psy3652         114 LGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAI  193 (394)
Q Consensus       114 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~  193 (394)
                      |++++++|+|||..++..|+..+++.++|+++.++++.+...+...++...+++++|+|||++|+|||||+.+.++++++
T Consensus       111 la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~i~~  190 (511)
T TIGR01237       111 LNALICLEVGKIIPEADAEVAEAIDFCEYYAREMERLAGQGVNLDIEGETNRYFYQPRGVAVVISPWNFPMAIAVGMTVA  190 (511)
T ss_pred             HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecceeEEEECCCCcHHHHHHHHHHH
Confidence            99999999999999999999999999999999888776543332223445677899999999999999999999999999


Q ss_pred             Hh-----------------------------------------------------------------hHHHHHh------
Q psy3652         194 AL-----------------------------------------------------------------VGVAVQS------  202 (394)
Q Consensus       194 aL-----------------------------------------------------------------~g~~i~~------  202 (394)
                      ||                                                                 +|+.|++      
T Consensus       191 ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa~~~  270 (511)
T TIGR01237       191 PIVTGNCVVLKPAETSTVIAAKIVEILIEAGLPPGVFQFVPGKGSEVGSYLVNHPKTHLITFTGSREVGCRIYEDAAKVQ  270 (511)
T ss_pred             HHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCCCcEEEccCCCchhHHHHhcCCCCCeEEEECchHHHHHHHHHHhccc
Confidence            99                                                                 6777754      


Q ss_pred             ----hhhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc-----------------------
Q psy3652         203 ----RFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK-----------------------  255 (394)
Q Consensus       203 ----~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~-----------------------  255 (394)
                          +++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++                       
T Consensus       271 ~~~~~~~~~~lElgG~~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~g~~~~  350 (511)
T TIGR01237       271 PGQKHLKRVIAEMGGKDAIIVDESADIEQAVAGAVYSAFGFTGQKCSACSRVVVLSPVYDAVVERFVEATRSLNVGPTDD  350 (511)
T ss_pred             ccccccceeEeccCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCcccceEEEEehhHHHHHHHHHHHHHHhCCCCCCCC
Confidence                35699999999999999999999999999999999999999999999999998                       


Q ss_pred             -----------------------------cC------CCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHH
Q psy3652         256 -----------------------------KI------DRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAI  300 (394)
Q Consensus       256 -----------------------------~~------~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi  300 (394)
                                                   .+      ...|+|++|||+.+++++|++++||+||||++|++|+|+||||
T Consensus       351 ~~~~~gpli~~~~~~~v~~~i~~a~~~g~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPVl~v~~~~~~deai  430 (511)
T TIGR01237       351 PSTQVGPVIDQKSQAKIQEYIEQGKAEGELAIGGCDAPSEGYFIGPTIFKDVDRHARLAQEEIFGPVVAIIRAADFDEAL  430 (511)
T ss_pred             CCCcCCCCCCHHHHHHHHHHHHHHHHCCcEEECCccCCCCCeEEcCEEEeCCCCCChHhhCCCcCCeEEEEeeCCHHHHH
Confidence                                         00      1147899999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCC-CCCCCccCCCCCCCCC-CchHHHHHhhhheeEEE
Q psy3652         301 TWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGA-EIGGAFGGEKYTGGGR-ESGSDSWKQYCRRSTVT  378 (394)
Q Consensus       301 ~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~-~~~~pfGG~~~SG~G~-~~g~~~l~~f~~~k~v~  378 (394)
                      +++|+++|||+++|||+|.+++.+++  .++++|+|+||+..... .+.+||||+|.||+|+ .+|.+++++|++.|+++
T Consensus       431 ~~~n~~~~gL~a~i~t~d~~~~~~~~--~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~~~~~k~v~  508 (511)
T TIGR01237       431 EIANGTEYGLTGGVYSNTRDHIERAA--AEFEVGNLYFNRTITGAIVGRQPFGGFKMSGTDSKAGGPDYLLQFMQPKTVT  508 (511)
T ss_pred             HHHhCCCCCCeEEEEcCCHHHHHHHH--HhCCcceEEECCCCCCCCCCCCCCCccccccCCCcCCCHHHHHHhcceEEEE
Confidence            99999999999999999999999999  88999999999865433 3458999999999995 78999999999999998


Q ss_pred             Eec
Q psy3652         379 INH  381 (394)
Q Consensus       379 ~~~  381 (394)
                      .++
T Consensus       509 ~~~  511 (511)
T TIGR01237       509 ENI  511 (511)
T ss_pred             EeC
Confidence            763

This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs.

>TIGR03240 arg_catab_astD succinylglutamic semialdehyde dehydrogenase

Probab=100.00  E-value=6.2e-72  Score=569.97  Aligned_cols=350  Identities=28%  Similarity=0.461  Sum_probs=314.4

Q ss_pred             ceeCCeec-cCCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHH
Q psy3652          39 VYDGTSWK-ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQL  117 (394)
Q Consensus        39 ~~i~G~~~-~~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~  117 (394)
                      +||+|+|+ .++.+++++||+||+++++++.++.+|+++++++|++||+.|+.+|.++|.++|++++++|++++++|+++
T Consensus         1 ~~i~g~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~   80 (484)
T TIGR03240         1 LFIDGKWRAGQGESFSSTNPATQEVLWQGAAASAAQVEAAVAAARAAFPAWARLSLEERIAVVQRFAALLEERKEALARV   80 (484)
T ss_pred             CeECCEEecCCCCEEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence            58999997 45678999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh--
Q psy3652         118 VSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL--  195 (394)
Q Consensus       118 ~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL--  195 (394)
                      +++|+|||..+++.|+..+++.+++++.......+...... ++...++.++|+|||++|+|||||+.+.++++++||  
T Consensus        81 ~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~ALaa  159 (484)
T TIGR03240        81 IARETGKPLWETRTEVASMIGKVAISIKAYHERTGESENPM-PDGRAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALLA  159 (484)
T ss_pred             HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCC-CCceeEEEEecccEEEEECCCchHHHHHHHHHHHHHHc
Confidence            99999999999999999999999998877766555433221 233457789999999999999999999999999999  


Q ss_pred             --------------------------------------------------------------hHHHHHhh-----hhhhc
Q psy3652         196 --------------------------------------------------------------VGVAVQSR-----FGKLL  208 (394)
Q Consensus       196 --------------------------------------------------------------~g~~i~~~-----~~~~~  208 (394)
                                                                                    +|+.|++.     .++++
T Consensus       160 GN~VVlKPs~~tp~t~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~L~~~~~vd~V~fTGS~~~G~~i~~~aa~~~~~~~~  239 (484)
T TIGR03240       160 GNTVVFKPSELTPWVAEETVKLWEKAGLPAGVLNLVQGARETGVALAAHPDIDGLLFTGSSNTGHLLHRQFAGRPEKILA  239 (484)
T ss_pred             CCEEEEECCccccHHHHHHHHHHHHhCcCcccEEEEeCCHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhhcCCCcEE
Confidence                                                                          77777653     34589


Q ss_pred             cccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc---------------------------------
Q psy3652         209 LELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK---------------------------------  255 (394)
Q Consensus       209 lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~---------------------------------  255 (394)
                      ||||||||+||++|||++.|++.+++++|.|+||.|++++|||||++                                 
T Consensus       240 lElGGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~~~gpl  319 (484)
T TIGR03240       240 LEMGGNNPLIVDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPDGAQGDAFLARLVEVAERLTVGAWDAEPQPFMGAV  319 (484)
T ss_pred             EECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeccccHHHHHHHHHHHHHhcccCCCCcCCCCccccc
Confidence            99999999999999999999999999999999999999999999987                                 


Q ss_pred             ----------------------------cCCCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcCC
Q psy3652         256 ----------------------------KIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVK  307 (394)
Q Consensus       256 ----------------------------~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~  307 (394)
                                                  ..+..|+|++|||+ +++++|.+++||+||||++|++|+|+||||+++|+++
T Consensus       320 i~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~i~PTvl-~v~~~~~i~~eE~FGPVl~v~~~~~~~eai~~~n~~~  398 (484)
T TIGR03240       320 ISLQAAQRLLAAQAKLLALGGKSLLAMRQLDPGAALLTPGII-DVTGVAELPDEEHFGPLLQVIRYDDFDEAIAIANNTR  398 (484)
T ss_pred             CCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCEEEcCEEE-ccCCCCHHHhCCCcCCeEEEEEeCCHHHHHHHHhCCC
Confidence                                        00123689999999 6999999999999999999999999999999999999


Q ss_pred             CCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEEecCC---c
Q psy3652         308 QGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTINHGK---E  384 (394)
Q Consensus       308 ~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~~~~~---~  384 (394)
                      |||++||||+|.+++++++  .++++|.|+||.......+.+||||+|.||+|+++|..+++ |++.|++++++..   .
T Consensus       399 ~gL~~~v~t~d~~~a~~~~--~~l~aG~v~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~-~~~~~~~~~~~~~~~~~  475 (484)
T TIGR03240       399 FGLSAGLLSDDRELYDRFL--LEIRAGIVNWNKPLTGASSAAPFGGIGASGNHRPSAYYAAD-YCAYPVASLEADSLTLP  475 (484)
T ss_pred             CCceEEEEcCCHHHHHHHH--HhCCcceEEEECCCCCCCCCCCcCCcccccCCCCCchHHHh-heeeeEEEEecccccCC
Confidence            9999999999999999999  88999999999875555667899999999999999977766 9999999999622   2


Q ss_pred             ccccccccC
Q psy3652         385 ITLAQGIKF  393 (394)
Q Consensus       385 ~~~~~~~~~  393 (394)
                      .|++++++|
T Consensus       476 ~~~~~~~~~  484 (484)
T TIGR03240       476 ATLSPGLKF  484 (484)
T ss_pred             CCcCCCCCC
Confidence            288999998

Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism.

>PRK13968 putative succinate semialdehyde dehydrogenase; Provisional

Probab=100.00  E-value=4.3e-72  Score=567.48  Aligned_cols=328  Identities=27%  Similarity=0.431  Sum_probs=301.3

Q ss_pred             CCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCChHH
Q psy3652          49 GEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAE  128 (394)
Q Consensus        49 ~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~  128 (394)
                      .++++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|++++++|++++++|++++++|+|||..+
T Consensus         6 ~~~~~~~nP~t~~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~   85 (462)
T PRK13968          6 ATHAISVNPATGEQLSVLPWAGADDIENALQLAAAGFRDWRETNIDYRAQKLRDIGKALRARSEEMAQMITREMGKPINQ   85 (462)
T ss_pred             CCceEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCCHHH
Confidence            45788999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh-------------
Q psy3652         129 GIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL-------------  195 (394)
Q Consensus       129 a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL-------------  195 (394)
                      ++.|+..+++.++|++..++.+.+..... ..+...++.++|+|||++|+|||||+.+.++++++||             
T Consensus        86 a~~ev~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~~~~ALaaGN~vv~KPs~~  164 (462)
T PRK13968         86 ARAEVAKSANLCDWYAEHGPAMLKAEPTL-VENQQAVIEYRPLGTILAIMPWNFPLWQVMRGAVPILLAGNGYLLKHAPN  164 (462)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhCCcccc-CCCceEEEEEeccceEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCc
Confidence            99999999999999998877654432221 2344567889999999999999999999999999999             


Q ss_pred             ---------------------------------------------------hHHHHHh----hhhhhccccCCCCeEEEe
Q psy3652         196 ---------------------------------------------------VGVAVQS----RFGKLLLELGGNNAIIVN  220 (394)
Q Consensus       196 ---------------------------------------------------~g~~i~~----~~~~~~lElgGk~p~iV~  220 (394)
                                                                         +|+.|++    +++|+++|||||||+||+
T Consensus       165 tp~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~l~~~~~v~~V~fTGs~~~G~~i~~~aa~~l~~~~lElGGk~p~iV~  244 (462)
T PRK13968        165 VMGCAQLIAQVFKDAGIPQGVYGWLNADNDGVSQMINDSRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIVL  244 (462)
T ss_pred             ChHHHHHHHHHHHHcCcCcCcEEEEecCchhhHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEecCCCCceEEC
Confidence                                                               6777765    578999999999999999


Q ss_pred             cCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc---------------------------------------------
Q psy3652         221 EDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK---------------------------------------------  255 (394)
Q Consensus       221 ~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~---------------------------------------------  255 (394)
                      +|||++.|++.+++++|.|+||.|++++|||||++                                             
T Consensus       245 ~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~~~~~i~  324 (462)
T PRK13968        245 NDADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAFTERFVAAAAALKMGDPRDEENALGPMARFDLRDELHHQVE  324 (462)
T ss_pred             CCCCHHHHHHHHHHHHHhccCCCCcCCcEEEECHhHHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCCCHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999                                             


Q ss_pred             --------------cCCCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcCCCCcEEEEEcCCHHH
Q psy3652         256 --------------KIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTN  321 (394)
Q Consensus       256 --------------~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~~gLsa~v~t~d~~~  321 (394)
                                    .....|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.
T Consensus       325 ~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~d~~eai~~~n~~~~gLs~~v~t~d~~~  404 (462)
T PRK13968        325 ATLAEGARLLLGGEKIAGAGNYYAPTVLANVTPEMTAFREELFGPVAAITVAKDAEHALELANDSEFGLSATIFTTDETQ  404 (462)
T ss_pred             HHHHCCCEEEeCCCcCCCCceEECCEEEeCCCCCChHHhCCCcCCEEEEEEECCHHHHHHHHhCCCCcceEEEEcCCHHH
Confidence                          001137899999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEEe
Q psy3652         322 LFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTIN  380 (394)
Q Consensus       322 a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~~  380 (394)
                      +++++  .++++|.|+||+.. ...+.+||||+|.||+|+++|.+++++|++.|+++++
T Consensus       405 a~~~~--~~l~~G~v~iN~~~-~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~~~  460 (462)
T PRK13968        405 ARQMA--ARLECGGVFINGYC-ASDARVAFGGVKKSGFGRELSHFGLHEFCNIQTVWKD  460 (462)
T ss_pred             HHHHH--HhCCcceEEECCCC-CCCCCCCCCCccccccCcCchHHHHHHhcceeEEEEe
Confidence            99999  88999999999864 3456789999999999999999999999999999875

>cd07151 ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like

Probab=100.00  E-value=7.6e-72  Score=567.25  Aligned_cols=336  Identities=29%  Similarity=0.473  Sum_probs=307.4

Q ss_pred             Ceecc--CCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHH
Q psy3652          43 TSWKA--NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSL  120 (394)
Q Consensus        43 G~~~~--~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~  120 (394)
                      |+|+.  ++.+++++||+||+++++++.++.+|+++++++|++||+.|+.+|.++|.++|++++++|++++++|++++++
T Consensus         1 g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~   80 (465)
T cd07151           1 GEWRDGTSERTIDVLNPYTGETLAEIPAASKEDVDEAYRAAAAAQKEWAATLPQERAEILEKAAQILEERRDEIVEWLIR   80 (465)
T ss_pred             CCceeCCCCCeEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence            56752  4567999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HcCCChHHhHHHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh-----
Q psy3652         121 EMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL-----  195 (394)
Q Consensus       121 e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL-----  195 (394)
                      |+|||..++..|+..+++.++++++..+++.+...+...++...++.++|+|||++|+|||||+.+.++++++||     
T Consensus        81 e~Gk~~~~a~~Ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~  160 (465)
T cd07151          81 ESGSTRIKANIEWGAAMAITREAATFPLRMEGRILPSDVPGKENRVYREPLGVVGVISPWNFPLHLSMRSVAPALALGNA  160 (465)
T ss_pred             HcCCCHHHHHHHHHHHHHHHHHHHHhHHHhcCccccCCCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCE
Confidence            999999999999999999999999888777665544333345567889999999999999999999999999998     


Q ss_pred             -------------------------------------------------------------hHHHHHh----hhhhhccc
Q psy3652         196 -------------------------------------------------------------VGVAVQS----RFGKLLLE  210 (394)
Q Consensus       196 -------------------------------------------------------------~g~~i~~----~~~~~~lE  210 (394)
                                                                                   +|+.|++    +++|+++|
T Consensus       161 Vi~Kps~~~p~~~~~~l~~~l~~aG~P~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lE  240 (465)
T cd07151         161 VVLKPASDTPITGGLLLAKIFEEAGLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHIGELAGRHLKKVALE  240 (465)
T ss_pred             EEEECCCCCcHhHHHHHHHHHHHcCcCccceEEEecCchhhHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCcEEEE
Confidence                                                                         6666654    57799999


Q ss_pred             cCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc-----------------------------------
Q psy3652         211 LGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK-----------------------------------  255 (394)
Q Consensus       211 lgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~-----------------------------------  255 (394)
                      ||||||+||++|||++.|++.+++++|.|+||.|++++|||||++                                   
T Consensus       241 lGGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~  320 (465)
T cd07151         241 LGGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMAINRIIVHEDVYDEFVEKFVERVKALPYGDPSDPDTVVGPLINES  320 (465)
T ss_pred             CCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHH
Confidence            999999999999999999999999999999999999999999999                                   


Q ss_pred             ------------------c-C--CCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcCCCCcEEEE
Q psy3652         256 ------------------K-I--DRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSI  314 (394)
Q Consensus       256 ------------------~-~--~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~~gLsa~v  314 (394)
                                        . .  ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|
T Consensus       321 ~~~~v~~~v~~a~~~ga~vl~gg~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v  400 (465)
T cd07151         321 QVDGLLDKIEQAVEEGATLLVGGEAEGNVLEPTVLSDVTNDMEIAREEIFGPVAPIIKADDEEEALELANDTEYGLSGAV  400 (465)
T ss_pred             HHHHHHHHHHHHHhCCCEEEecCCcCCEEEccEEEeCCCCCCchhhCcCcCCeEEEEeeCCHHHHHHHHhCCCccceEEE
Confidence                              0 0  124689999999999999999999999999999999999999999999999999999


Q ss_pred             EcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEEe
Q psy3652         315 FTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTIN  380 (394)
Q Consensus       315 ~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~~  380 (394)
                      ||+|.+++++++  .++++|.|+||..+....+.+||||+|.||+|+++|++++++|++.|+++++
T Consensus       401 ~t~d~~~a~~~~--~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~~~~~  464 (465)
T cd07151         401 FTSDLERGVQFA--RRIDAGMTHINDQPVNDEPHVPFGGEKNSGLGRFNGEWALEEFTTDKWISVQ  464 (465)
T ss_pred             ECCCHHHHHHHH--HhCCcCeEEECCCCCCCCCCCCCCCcccccCCcCChHHHHHHhhceEEEEec
Confidence            999999999999  8899999999987655456789999999999999999999999999999875

NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD.

>PRK03137 1-pyrroline-5-carboxylate dehydrogenase; Provisional

Probab=100.00  E-value=9.7e-72  Score=571.80  Aligned_cols=353  Identities=26%  Similarity=0.423  Sum_probs=315.7

Q ss_pred             hhhhcCCCCCCCCCceeCCeeccCCCeeeeecCC-CCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHH
Q psy3652          25 FLKELGLSGSVNPGVYDGTSWKANGEIIPSINPS-TGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQI  103 (394)
Q Consensus        25 ~~~~~~~~~~~~~~~~i~G~~~~~~~~~~v~nP~-tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~  103 (394)
                      .|+.+........++||||+|+.++.+++++||+ ||+++++++.++.+|+++++++|++||+.|+.+|.++|.++|+++
T Consensus        25 ~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~P~~t~~~i~~~~~a~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~  104 (514)
T PRK03137         25 ALKKVEKELGQDYPLIIGGERITTEDKIVSINPANKSEVVGRVSKATKELAEKAMQAALEAFETWKKWSPEDRARILLRA  104 (514)
T ss_pred             HHHHHHhhcccccceeECCEEecCCCeeEeECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence            4444333323456789999998777889999999 699999999999999999999999999999999999999999999


Q ss_pred             HHHHhhCHHHHHHHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhcc-CcccCCCCCCceeEeeeccceeEEEEccCCc
Q psy3652         104 GDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYS-GSILPSERPGHVLLENWNPLGVVGIISAFNF  182 (394)
Q Consensus       104 a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~-~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~  182 (394)
                      +++|++++++|++++++|+|||..+++.|+..+++.++++++.++++. +..... .++...+++++|+|||++|+||||
T Consensus       105 a~~l~~~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~-~~g~~~~~~~~P~GVv~~I~PwN~  183 (514)
T PRK03137        105 AAIIRRRKHEFSAWLVKEAGKPWAEADADTAEAIDFLEYYARQMLKLADGKPVES-RPGEHNRYFYIPLGVGVVISPWNF  183 (514)
T ss_pred             HHHHHHCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccC-CCCceEEEEEecCcEEEEECCCcc
Confidence            999999999999999999999999999999999999999999887764 322221 234456788999999999999999


Q ss_pred             hhHhHHHHHHHHh-----------------------------------------------------------------hH
Q psy3652         183 PVAVYGWNAAIAL-----------------------------------------------------------------VG  197 (394)
Q Consensus       183 P~~~~~~~~~~aL-----------------------------------------------------------------~g  197 (394)
                      |+.+.++++++||                                                                 +|
T Consensus       184 P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~a~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G  263 (514)
T PRK03137        184 PFAIMAGMTLAAIVAGNTVLLKPASDTPVIAAKFVEVLEEAGLPAGVVNFVPGSGSEVGDYLVDHPKTRFITFTGSREVG  263 (514)
T ss_pred             HHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCCCcEEEeecCchHHHHHHhcCCCcCEEEEECCcHHH
Confidence            9999999999999                                                                 67


Q ss_pred             HHHHh----------hhhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc------------
Q psy3652         198 VAVQS----------RFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK------------  255 (394)
Q Consensus       198 ~~i~~----------~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~------------  255 (394)
                      +.|++          ++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++            
T Consensus       264 ~~i~~~aa~~~~~~~~l~~v~lElgGk~~~iV~~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~  343 (514)
T PRK03137        264 LRIYERAAKVQPGQIWLKRVIAEMGGKDAIVVDEDADLDLAAESIVASAFGFSGQKCSACSRAIVHEDVYDEVLEKVVEL  343 (514)
T ss_pred             HHHHHHHhcccccccccceEEecCCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCccCeEEEEeHHHHHHHHHHHHHH
Confidence            77764          35799999999999999999999999999999999999999999999999999            


Q ss_pred             --------c-------------------------------------CCCCCceecCeEEEcCCCCCcccccccccceEEE
Q psy3652         256 --------K-------------------------------------IDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYV  290 (394)
Q Consensus       256 --------~-------------------------------------~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v  290 (394)
                              .                                     ....|+|+.|||+.+++++|++++||+||||++|
T Consensus       344 ~~~l~~g~p~~~~~~Gpli~~~~~~~v~~~v~~a~~~~~vl~Gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v  423 (514)
T PRK03137        344 TKELTVGNPEDNAYMGPVINQASFDKIMSYIEIGKEEGRLVLGGEGDDSKGYFIQPTIFADVDPKARIMQEEIFGPVVAF  423 (514)
T ss_pred             HHhCCCCCCCCccCcCCCCCHHHHHHHHHHHHHHHhCCEEEeCCCcCCCCceEEeeEEEeCCCCCCHHHhCCCCCceEEE
Confidence                    0                                     0114789999999999999999999999999999


Q ss_pred             EeeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCC-CCCCCccCCCCCCCC-CCchHHHH
Q psy3652         291 FPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGA-EIGGAFGGEKYTGGG-RESGSDSW  368 (394)
Q Consensus       291 ~~~~~~~eAi~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~-~~~~pfGG~~~SG~G-~~~g~~~l  368 (394)
                      ++|+|++|||+++|+++|||++||||+|.+.+++++  .++++|+|+||...... .+.+||||+|.||+| +++|.+++
T Consensus       424 ~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~--~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~gg~~~l  501 (514)
T PRK03137        424 IKAKDFDHALEIANNTEYGLTGAVISNNREHLEKAR--REFHVGNLYFNRGCTGAIVGYHPFGGFNMSGTDSKAGGPDYL  501 (514)
T ss_pred             EecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHH--HhCCcCeEEECCCCCCCCCCCCCCCCcccccCCcccCCHHHH
Confidence            999999999999999999999999999999999999  88999999999864333 345899999999999 68999999


Q ss_pred             HhhhheeEEEEe
Q psy3652         369 KQYCRRSTVTIN  380 (394)
Q Consensus       369 ~~f~~~k~v~~~  380 (394)
                      ++|++.|++...
T Consensus       502 ~~ft~~k~v~~~  513 (514)
T PRK03137        502 LLFLQAKTVSEM  513 (514)
T ss_pred             HHhceEEEEEEe
Confidence            999999998764

>cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like

Probab=100.00  E-value=1e-71  Score=567.28  Aligned_cols=341  Identities=29%  Similarity=0.507  Sum_probs=310.0

Q ss_pred             CCCceeCCeecc--CCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHH-Hhh-cCChhhHHHHHHHHHHHHhhCH
Q psy3652          36 NPGVYDGTSWKA--NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYA-AWA-ALPAPRRGEIVRQIGDALRHKL  111 (394)
Q Consensus        36 ~~~~~i~G~~~~--~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~-~w~-~~~~~~R~~~L~~~a~~l~~~~  111 (394)
                      ..++||||+|+.  ++..++++||+||+++++++.++.+|+++|+++|++||+ .|+ .+|.++|.++|+++++.|++++
T Consensus         6 ~~~~~I~G~~~~~~~~~~~~v~~P~t~~~i~~~~~~~~~~v~~av~~a~~a~~~~W~~~~~~~~R~~~L~~~a~~l~~~~   85 (481)
T cd07143           6 PTGLFINGEFVDSVHGGTVKVYNPSTGKLITKIAEATEADVDIAVEVAHAAFETDWGLKVSGSKRGRCLSKLADLMERNL   85 (481)
T ss_pred             ccCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhhcccCCHHHHHHHHHHHHHHHHHhH
Confidence            356899999973  467899999999999999999999999999999999998 599 9999999999999999999999


Q ss_pred             HHHHHHHHHHcCCChHHh-HHHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHH
Q psy3652         112 VPLGQLVSLEMGKILAEG-IGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWN  190 (394)
Q Consensus       112 ~~l~~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~  190 (394)
                      ++|++++++|+|||..++ ..|+..+++.++++++++++..+...+.. .+...++.++|+|||++|+|||||+.+.+++
T Consensus        86 ~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~a~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~  164 (481)
T cd07143          86 DYLASIEALDNGKTFGTAKRVDVQASADTFRYYGGWADKIHGQVIETD-IKKLTYTRHEPIGVCGQIIPWNFPLLMCAWK  164 (481)
T ss_pred             HHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCC-CCceEEEEEecceeEEEECCCcChHHHHHHH
Confidence            999999999999999765 56999999999999999887665543322 3345677899999999999999999999999


Q ss_pred             HHHHh-----------------------------------------------------------------hHHHHHh---
Q psy3652         191 AAIAL-----------------------------------------------------------------VGVAVQS---  202 (394)
Q Consensus       191 ~~~aL-----------------------------------------------------------------~g~~i~~---  202 (394)
                      +++||                                                                 +|+.|++   
T Consensus       165 ~~~ALaaGN~VvlKps~~~p~~~~~l~~~l~~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~G~~i~~~aa  244 (481)
T cd07143         165 IAPALAAGNTIVLKPSELTPLSALYMTKLIPEAGFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTGSTLVGRKVMEAAA  244 (481)
T ss_pred             HHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHhcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECchHHHHHHHHHHH
Confidence            99999                                                                 6777765   


Q ss_pred             --hhhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc-------------------------
Q psy3652         203 --RFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK-------------------------  255 (394)
Q Consensus       203 --~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~-------------------------  255 (394)
                        .++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++                         
T Consensus       245 ~~~~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~naGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~  324 (481)
T cd07143         245 KSNLKKVTLELGGKSPNIVFDDADLESAVVWTAYGIFFNHGQVCCAGSRIYVQEGIYDKFVKRFKEKAKKLKVGDPFAED  324 (481)
T ss_pred             HhcCCEEEeecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCC
Confidence              35689999999999999999999999999999999999999999999999999                         


Q ss_pred             ----------------------------------cCCCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHH
Q psy3652         256 ----------------------------------KIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAIT  301 (394)
Q Consensus       256 ----------------------------------~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~  301 (394)
                                                        .....|+|+.|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus       325 ~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~  404 (481)
T cd07143         325 TFQGPQVSQIQYERIMSYIESGKAEGATVETGGKRHGNEGYFIEPTIFTDVTEDMKIVKEEIFGPVVAVIKFKTEEEAIK  404 (481)
T ss_pred             CCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCCCCceEEeeEEEecCCCCChhhhcCCcCCeEEEEeeCCHHHHHH
Confidence                                              0012478999999999999999999999999999999999999999


Q ss_pred             HHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEEe
Q psy3652         302 WNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTIN  380 (394)
Q Consensus       302 ~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~~  380 (394)
                      ++|+++|||++||||+|.+.+.+++  .++++|.|+||+.+ ...+.+||||+|.||+|+++|.+++++|++.|++.++
T Consensus       405 ~~n~~~~gL~~~v~t~d~~~~~~~~--~~l~~G~v~iN~~~-~~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~i~~~  480 (481)
T cd07143         405 RANDSTYGLAAAVFTNNINNAIRVA--NALKAGTVWVNCYN-LLHHQVPFGGYKQSGIGRELGEYALENYTQIKAVHIN  480 (481)
T ss_pred             HHhCCCCCceEEEECCCHHHHHHHH--HhcCcCeEEECCCC-CCCCCCCCCCccccccCcccHHHHHHHHhCeEEEEEe
Confidence            9999999999999999999999999  88999999999864 4556789999999999999999999999999999765

NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD.

>cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like

Probab=100.00  E-value=1.1e-71  Score=568.13  Aligned_cols=342  Identities=30%  Similarity=0.566  Sum_probs=312.2

Q ss_pred             CCCCceeCCeecc--CCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHH---HhhcCChhhHHHHHHHHHHHHhh
Q psy3652          35 VNPGVYDGTSWKA--NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYA---AWAALPAPRRGEIVRQIGDALRH  109 (394)
Q Consensus        35 ~~~~~~i~G~~~~--~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~---~w~~~~~~~R~~~L~~~a~~l~~  109 (394)
                      ...++||||+|+.  ++.+++++||+||+++++++.++.+++++++++|++||+   .|+.+|.++|.++|+++++.|++
T Consensus         5 ~~~~~~I~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~W~~~~~~~R~~~L~~~a~~l~~   84 (481)
T cd07141           5 KYTKIFINNEWHDSVSGKTFPTINPATGEKICEVQEGDKADVDKAVKAARAAFKLGSPWRTMDASERGRLLNKLADLIER   84 (481)
T ss_pred             ccccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhccCccccCCHHHHHHHHHHHHHHHHH
Confidence            3567899999973  568899999999999999999999999999999999998   69999999999999999999999


Q ss_pred             CHHHHHHHHHHHcCCChHHh-HHHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHH
Q psy3652         110 KLVPLGQLVSLEMGKILAEG-IGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYG  188 (394)
Q Consensus       110 ~~~~l~~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~  188 (394)
                      ++++|++++++|+|||..++ ..|+..+++.++++++.++++.+...+.. .+...+..++|+|||++|+|||||+.+.+
T Consensus        85 ~~~~la~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~p~N~P~~~~~  163 (481)
T cd07141          85 DRAYLASLETLDNGKPFSKSYLVDLPGAIKVLRYYAGWADKIHGKTIPMD-GDFFTYTRHEPVGVCGQIIPWNFPLLMAA  163 (481)
T ss_pred             hHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhcCceecCC-CCceEEEEEeceeEEEEEccChhHHHHHH
Confidence            99999999999999999766 46999999999999998888766544322 23445778999999999999999999999


Q ss_pred             HHHHHHh-----------------------------------------------------------------hHHHHHh-
Q psy3652         189 WNAAIAL-----------------------------------------------------------------VGVAVQS-  202 (394)
Q Consensus       189 ~~~~~aL-----------------------------------------------------------------~g~~i~~-  202 (394)
                      +++++||                                                                 +|+.|++ 
T Consensus       164 ~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~  243 (481)
T cd07141         164 WKLAPALACGNTVVLKPAEQTPLTALYLASLIKEAGFPPGVVNVVPGYGPTAGAAISSHPDIDKVAFTGSTEVGKLIQQA  243 (481)
T ss_pred             HHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHH
Confidence            9999999                                                                 7777754 


Q ss_pred             ----hhhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc-----------------------
Q psy3652         203 ----RFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK-----------------------  255 (394)
Q Consensus       203 ----~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~-----------------------  255 (394)
                          ++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++                       
T Consensus       244 aa~~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~  323 (481)
T cd07141         244 AGKSNLKRVTLELGGKSPNIVFADADLDYAVEQAHEALFFNMGQCCCAGSRTFVQESIYDEFVKRSVERAKKRVVGNPFD  323 (481)
T ss_pred             hhhhcCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCC
Confidence                45789999999999999999999999999999999999999999999999999                       


Q ss_pred             ------------------------------------cCCCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHH
Q psy3652         256 ------------------------------------KIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEA  299 (394)
Q Consensus       256 ------------------------------------~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eA  299 (394)
                                                          ..+..|+|+.|||+.+++++|++++||+||||++|++|+|+|||
T Consensus       324 ~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~ea  403 (481)
T cd07141         324 PKTEQGPQIDEEQFKKILELIESGKKEGAKLECGGKRHGDKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIFKFKTIDEV  403 (481)
T ss_pred             CCCCCcCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhccccCCeEEEEeeCCHHHH
Confidence                                                01124889999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEE
Q psy3652         300 ITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTI  379 (394)
Q Consensus       300 i~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~  379 (394)
                      |+++|+++|||++||||+|.+++.+++  .++++|.|+||.+. ...+.+||||+|.||+|+++|.+++++|++.|++++
T Consensus       404 i~~~n~~~~gLs~~vft~d~~~a~~~~--~~l~~G~v~iN~~~-~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~~  480 (481)
T cd07141         404 IERANNTTYGLAAAVFTKDIDKAITFS--NALRAGTVWVNCYN-VVSPQAPFGGYKMSGNGRELGEYGLQEYTEVKTVTI  480 (481)
T ss_pred             HHHHhCCCccceEEEECCCHHHHHHHH--HhcCcCeEEECCCC-CCCCCCCCCCcccCcCCccchHHHHHHHhheEEEEE
Confidence            999999999999999999999999999  88999999999864 456678999999999999999999999999999876


Q ss_pred             e
Q psy3652         380 N  380 (394)
Q Consensus       380 ~  380 (394)
                      +
T Consensus       481 ~  481 (481)
T cd07141         481 K  481 (481)
T ss_pred             C
Confidence            3

NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism.

>cd07144 ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like

Probab=100.00  E-value=1.6e-71  Score=567.44  Aligned_cols=341  Identities=31%  Similarity=0.591  Sum_probs=311.5

Q ss_pred             CCCceeCCeecc--CCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHH-hhcCChhhHHHHHHHHHHHHhhCHH
Q psy3652          36 NPGVYDGTSWKA--NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAA-WAALPAPRRGEIVRQIGDALRHKLV  112 (394)
Q Consensus        36 ~~~~~i~G~~~~--~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~-w~~~~~~~R~~~L~~~a~~l~~~~~  112 (394)
                      ..++||||+|..  ++.+++++||+||+++++++.++.+|+++++++|++||+. |+.+|.++|.++|+++++.|+++++
T Consensus         7 ~~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~ai~~A~~A~~~~w~~~~~~~R~~iL~~~a~~l~~~~~   86 (484)
T cd07144           7 PTGLFINNEFVKSSDGETIKTVNPSTGEVIASVYAAGEEDVDKAVKAARKAFESWWSKVTGEERGELLDKLADLVEKNRD   86 (484)
T ss_pred             CcCcEECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHhhHhcCCHHHHHHHHHHHHHHHHHhHH
Confidence            456899999973  4678999999999999999999999999999999999996 8899999999999999999999999


Q ss_pred             HHHHHHHHHcCCChHHh-HHHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHH
Q psy3652         113 PLGQLVSLEMGKILAEG-IGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNA  191 (394)
Q Consensus       113 ~l~~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~  191 (394)
                      +|++++++|+|||..++ ..|+..+++.+++++++++++.++..+.. .+...+..++|+|||++|+|||||+.+.++++
T Consensus        87 ~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~g~~~~~~-~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~  165 (484)
T cd07144          87 LLAAIEALDSGKPYHSNALGDLDEIIAVIRYYAGWADKIQGKTIPTS-PNKLAYTLHEPYGVCGQIIPWNYPLAMAAWKL  165 (484)
T ss_pred             HHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCceecCC-CCceEEEEEecceEEEEECcCCCHHHHHHHHH
Confidence            99999999999998775 67999999999999998888766544332 34445788999999999999999999999999


Q ss_pred             HHHh-----------------------------------------------------------------hHHHHHh----
Q psy3652         192 AIAL-----------------------------------------------------------------VGVAVQS----  202 (394)
Q Consensus       192 ~~aL-----------------------------------------------------------------~g~~i~~----  202 (394)
                      ++||                                                                 +|+.|++    
T Consensus       166 ~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~vd~V~fTGS~~~g~~i~~~a~~  245 (484)
T cd07144         166 APALAAGNTVVIKPAENTPLSLLYFANLVKEAGFPPGVVNIIPGYGAVAGSALAEHPDVDKIAFTGSTATGRLVMKAAAQ  245 (484)
T ss_pred             HHHHHcCCEEEEECCccchHHHHHHHHHHHHhCcCCCcEEEEecCCchHHHHHhcCCCcCEEEEECcHHHHHHHHHHHHh
Confidence            9999                                                                 6777765    


Q ss_pred             hhhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc---------------------------
Q psy3652         203 RFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK---------------------------  255 (394)
Q Consensus       203 ~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~---------------------------  255 (394)
                      +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++                           
T Consensus       246 ~~~~~~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~G~p~~~~~  325 (484)
T cd07144         246 NLKAVTLECGGKSPALVFEDADLDQAVKWAAAGIMYNSGQNCTATSRIYVQESIYDKFVEKFVEHVKQNYKVGSPFDDDT  325 (484)
T ss_pred             cCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhhCCcCCCCCCCC
Confidence            56799999999999999999999999999999999999999999999999998                           


Q ss_pred             --------------------------------cCC----CCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHH
Q psy3652         256 --------------------------------KID----RPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEA  299 (394)
Q Consensus       256 --------------------------------~~~----~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eA  299 (394)
                                                      ...    ..|+|+.|||+.+++++|++++||+||||++|++|+|+|||
T Consensus       326 ~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~ea  405 (484)
T cd07144         326 VVGPQVSKTQYDRVLSYIEKGKKEGAKLVYGGEKAPEGLGKGYFIPPTIFTDVPQDMRIVKEEIFGPVVVISKFKTYEEA  405 (484)
T ss_pred             cCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCcccCCCCceECCEEEeCCCCCCchhhCCCCCceEEEeccCCHHHH
Confidence                                            000    14789999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEE
Q psy3652         300 ITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTI  379 (394)
Q Consensus       300 i~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~  379 (394)
                      |+++|+++|||++||||+|.+++.+++  .++++|+|+||..+ ...+.+||||+|.||+|+++|.+++++|++.|++++
T Consensus       406 i~~~n~~~~gLsa~i~t~d~~~a~~~~--~~l~~G~v~iN~~~-~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~  482 (484)
T cd07144         406 IKKANDTTYGLAAAVFTKDIRRAHRVA--RELEAGMVWINSSN-DSDVGVPFGGFKMSGIGRELGEYGLETYTQTKAVHI  482 (484)
T ss_pred             HHHHhCCCCCceEEEECCCHHHHHHHH--HhcCcCEEEECCCC-CCCCCCCcCCcccCcCCCCchHHHHHHhhceEEEEE
Confidence            999999999999999999999999999  88999999999864 455678999999999999999999999999999987


Q ss_pred             e
Q psy3652         380 N  380 (394)
Q Consensus       380 ~  380 (394)
                      +
T Consensus       483 ~  483 (484)
T cd07144         483 N  483 (484)
T ss_pred             e
Confidence            5

NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD.

>cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like

Probab=100.00  E-value=1.8e-71  Score=566.83  Aligned_cols=341  Identities=39%  Similarity=0.684  Sum_probs=312.2

Q ss_pred             ceeCCeec-c-CCCeeeeecCCC-CCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHH
Q psy3652          39 VYDGTSWK-A-NGEIIPSINPST-GETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLG  115 (394)
Q Consensus        39 ~~i~G~~~-~-~~~~~~v~nP~t-g~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~  115 (394)
                      +||||+|+ . ++.+++++||+| ++++++++.++.+|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|+
T Consensus         1 ~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~ela   80 (478)
T cd07131           1 NYIGGEWVDSASGETFDSRNPADLEEVVGTFPLSTASDVDAAVEAAREAFPEWRKVPAPRRAEYLFRAAELLKKRKEELA   80 (478)
T ss_pred             CcCCCEeecCCCCCeEEEECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            58999997 3 468899999999 68999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh
Q psy3652         116 QLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL  195 (394)
Q Consensus       116 ~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL  195 (394)
                      +++++|+|||..+++.|+..+++.++++++..+.+.++..+...++...+.+++|+|||++|+|||||+.+..+++++||
T Consensus        81 ~~~~~e~Gk~~~~~~~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~AL  160 (478)
T cd07131          81 RLVTREMGKPLAEGRGDVQEAIDMAQYAAGEGRRLFGETVPSELPNKDAMTRRQPIGVVALITPWNFPVAIPSWKIFPAL  160 (478)
T ss_pred             HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceEEEEeeceeEEEEECCcCcHHHHHHHHHHHHH
Confidence            99999999999999999999999999999988776665444332344567899999999999999999999999999998


Q ss_pred             -----------------------------------------------------------------hHHHHHh----hhhh
Q psy3652         196 -----------------------------------------------------------------VGVAVQS----RFGK  206 (394)
Q Consensus       196 -----------------------------------------------------------------~g~~i~~----~~~~  206 (394)
                                                                                       +|+.|++    .++|
T Consensus       161 aaGN~VvlKps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~  240 (478)
T cd07131         161 VCGNTVVFKPAEDTPACALKLVELFAEAGLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGSTEVGERIGETCARPNKR  240 (478)
T ss_pred             HcCCEEEEECCCcCcHHHHHHHHHHHhcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCc
Confidence                                                                             6666654    5679


Q ss_pred             hccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc-------------------------------
Q psy3652         207 LLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK-------------------------------  255 (394)
Q Consensus       207 ~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~-------------------------------  255 (394)
                      +++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++                               
T Consensus       241 ~~lelgG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl  320 (478)
T cd07131         241 VALEMGGKNPIIVMDDADLDLALEGALWSAFGTTGQRCTATSRLIVHESVYDEFLKRFVERAKRLRVGDGLDEETDMGPL  320 (478)
T ss_pred             EEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhhHHHHHHHHHHHHHhcCCCCCCCCCCcCCcC
Confidence            9999999999999999999999999999999999999999999999999                               


Q ss_pred             ----------------------------cCC----CCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHH
Q psy3652         256 ----------------------------KID----RPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWN  303 (394)
Q Consensus       256 ----------------------------~~~----~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~  303 (394)
                                                  ..+    ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++
T Consensus       321 i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~~eai~~~  400 (478)
T cd07131         321 INEAQLEKVLNYNEIGKEEGATLLLGGERLTGGGYEKGYFVEPTVFTDVTPDMRIAQEEIFGPVVALIEVSSLEEAIEIA  400 (478)
T ss_pred             CCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEeCCCCCChHhhCCCcCCeEEEEEeCCHHHHHHHH
Confidence                                        000    247899999999999999999999999999999999999999999


Q ss_pred             hcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCC-CCchHHHHHhhhheeEEEEec
Q psy3652         304 NEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGG-RESGSDSWKQYCRRSTVTINH  381 (394)
Q Consensus       304 n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G-~~~g~~~l~~f~~~k~v~~~~  381 (394)
                      |+++|||+++|||+|.+++++++  .++++|+|+||.++....+.+||||+|.||+| +++|.+++++|++.|+|++++
T Consensus       401 n~~~~gL~~~v~t~d~~~a~~~~--~~l~~G~v~iN~~~~~~~~~~pfgG~k~SG~G~~~~g~~~~~~f~~~k~i~~~~  477 (478)
T cd07131         401 NDTEYGLSSAIYTEDVNKAFRAR--RDLEAGITYVNAPTIGAEVHLPFGGVKKSGNGHREAGTTALDAFTEWKAVYVDY  477 (478)
T ss_pred             hCCCCcceEEEEcCCHHHHHHHH--HhcCccEEEECCCCCCCCCCCCCCCcccccCCCcCCcHHHHHHhhheEEEEEeC
Confidence            99999999999999999999999  88999999999876555678999999999999 788999999999999998864

Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD.

>PRK09847 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-71  Score=567.37  Aligned_cols=343  Identities=22%  Similarity=0.409  Sum_probs=311.8

Q ss_pred             CCCCceeCCeec--cCCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHH--HhhcCChhhHHHHHHHHHHHHhhC
Q psy3652          35 VNPGVYDGTSWK--ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYA--AWAALPAPRRGEIVRQIGDALRHK  110 (394)
Q Consensus        35 ~~~~~~i~G~~~--~~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~  110 (394)
                      -..++||||+|+  .++.+++++||+||+++++++.++.+|+++|+++|++||+  .|+.+|.++|.++|++++++|+++
T Consensus        18 ~~~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~v~~~~~~dv~~av~aA~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~   97 (494)
T PRK09847         18 IENRLFINGEYTAAAENETFETVDPVTQAPLAKIARGKSVDIDRAVSAARGVFERGDWSLSSPAKRKAVLNKLADLMEAH   97 (494)
T ss_pred             cccCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHh
Confidence            345689999996  3578899999999999999999999999999999999997  599999999999999999999999


Q ss_pred             HHHHHHHHHHHcCCChHHhH-HHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHH
Q psy3652         111 LVPLGQLVSLEMGKILAEGI-GEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGW  189 (394)
Q Consensus       111 ~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~  189 (394)
                      +++|++++++|+|||+.++. .|+..+++.++|+++.++++.++..+.. .+...++.++|+|||++|+|||||+.+.++
T Consensus        98 ~~ela~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~  176 (494)
T PRK09847         98 AEELALLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVYGEVATTS-SHELAMIVREPVGVIAAIVPWNFPLLLTCW  176 (494)
T ss_pred             HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCC-CCceeEEEecceeEEEEECCCccHHHHHHH
Confidence            99999999999999999885 5999999999999999888766654432 234457889999999999999999999999


Q ss_pred             HHHHHh-----------------------------------------------------------------hHHHHHh--
Q psy3652         190 NAAIAL-----------------------------------------------------------------VGVAVQS--  202 (394)
Q Consensus       190 ~~~~aL-----------------------------------------------------------------~g~~i~~--  202 (394)
                      ++++||                                                                 +|+.|++  
T Consensus       177 ~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~v~fTGs~~~g~~v~~~a  256 (494)
T PRK09847        177 KLGPALAAGNSVILKPSEKSPLSAIRLAGLAKEAGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLKDA  256 (494)
T ss_pred             HHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHcCcCcCcEEEEeCCChhHHHHHhcCCCCCEEEEECCHHHHHHHHHHh
Confidence            999999                                                                 6776665  


Q ss_pred             ---hhhhhccccCCCCeEEEecCC-CHHHHHHHHHHHhhCcCCCcccCCceEEEecc-----------------------
Q psy3652         203 ---RFGKLLLELGGNNAIIVNEDA-DLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK-----------------------  255 (394)
Q Consensus       203 ---~~~~~~lElgGk~p~iV~~dA-Dl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~-----------------------  255 (394)
                         .++|+++|+|||||+||++|+ |++.|++.+++++|.|+||.|++++|||||++                       
T Consensus       257 a~~~~~~~~lElGGk~~~iV~~daaDl~~Aa~~i~~~~~~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~  336 (494)
T PRK09847        257 GDSNMKRVWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESIADEFLALLKQQAQNWQPGHPLD  336 (494)
T ss_pred             hhhCCCeEEEecCCCCeeEEcCCccCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence               457899999999999999997 99999999999999999999999999999999                       


Q ss_pred             ------------------------------cC----CCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHH
Q psy3652         256 ------------------------------KI----DRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAIT  301 (394)
Q Consensus       256 ------------------------------~~----~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~  301 (394)
                                                    ..    ...|.|+.|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus       337 ~~~~~gpli~~~~~~~v~~~v~~a~~~G~i~~gg~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~  416 (494)
T PRK09847        337 PATTMGTLIDCAHADSVHSFIREGESKGQLLLDGRNAGLAAAIGPTIFVDVDPNASLSREEIFGPVLVVTRFTSEEQALQ  416 (494)
T ss_pred             CCCcCCCCcCHHHHHHHHHHHHHHHHCCeEEECCccCCCCceEeeEEEeCCCCCChHHhCcCcCceEEEEecCCHHHHHH
Confidence                                          00    12367999999999999999999999999999999999999999


Q ss_pred             HHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEEec
Q psy3652         302 WNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTINH  381 (394)
Q Consensus       302 ~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~~~  381 (394)
                      ++|+++|||+++|||+|.+++.+++  .++++|.|+||+.+ ...+.+||||+|.||+|+++|.+++++|++.|+|+++.
T Consensus       417 ~~n~~~~gLsa~v~t~d~~~a~~~~--~~l~~G~v~iN~~~-~~~~~~PfGG~k~SG~G~~~g~~~l~~ft~~k~v~~~~  493 (494)
T PRK09847        417 LANDSQYGLGAAVWTRDLSRAHRMS--RRLKAGSVFVNNYN-DGDMTVPFGGYKQSGNGRDKSLHALEKFTELKTIWISL  493 (494)
T ss_pred             HHhCCCCCceEEEEcCCHHHHHHHH--HhCCcceEEECCCC-CCCCCCCcCCCcccccCccchHHHHHHhhceEEEEEec
Confidence            9999999999999999999999999  88999999999864 34467899999999999999999999999999998753

>TIGR01722 MMSDH methylmalonic acid semialdehyde dehydrogenase

Probab=100.00  E-value=2.8e-71  Score=564.51  Aligned_cols=342  Identities=26%  Similarity=0.404  Sum_probs=312.5

Q ss_pred             CceeCCeecc--CCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHH
Q psy3652          38 GVYDGTSWKA--NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLG  115 (394)
Q Consensus        38 ~~~i~G~~~~--~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~  115 (394)
                      ++||||+|+.  +++.++++||+||+++++++.++.+|+++++++|++||+.|+++|.++|.++|+++++.|++++++|+
T Consensus         2 ~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~ai~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~   81 (477)
T TIGR01722         2 NHWIGGKFAEGASGTYIPVTNPATNEVTTKVAFASVDEVDAAVASARETFLTWGQTSLAQRTSVLLRYQALLKEHRDEIA   81 (477)
T ss_pred             ceeECCEEecCCCCCeEeeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5799999973  46789999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh
Q psy3652         116 QLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL  195 (394)
Q Consensus       116 ~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL  195 (394)
                      ++++.|+|||+.+++.|+..+++.+++++...+.+.++..+...++...+..++|+|||++|+|||||+.+.++++++||
T Consensus        82 ~~~~~e~Gk~~~~a~~ev~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL  161 (477)
T TIGR01722        82 ELITAEHGKTHSDALGDVARGLEVVEHACGVNSLLKGETSTQVATRVDVYSIRQPLGVCAGITPFNFPAMIPLWMFPIAI  161 (477)
T ss_pred             HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEcccceEEEEccCChHHHHHHHHHHHHH
Confidence            99999999999999999999999999999888777665543322344456789999999999999999999999999998


Q ss_pred             ----------------------------------------------------------------hHHHHHh----hhhhh
Q psy3652         196 ----------------------------------------------------------------VGVAVQS----RFGKL  207 (394)
Q Consensus       196 ----------------------------------------------------------------~g~~i~~----~~~~~  207 (394)
                                                                                      +|+.|.+    .+||+
T Consensus       162 aaGN~VilKps~~~p~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~L~~~~~v~~V~ftGS~~~g~~v~~~a~~~~~~v  241 (477)
T TIGR01722       162 ACGNTFVLKPSEKVPSAAVKLAELFSEAGAPDGVLNVVHGDKEAVDRLLEHPDVKAVSFVGSTPIGRYIHTTGSAHGKRV  241 (477)
T ss_pred             hcCCEEEeeCcccChHHHHHHHHHHHHhCcCCCeEEEEeCCHHHHHHHHcCCCcCEEEEECCHHHHHHHHHHHHhcCCeE
Confidence                                                                            6777764    56789


Q ss_pred             ccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc--------------------------------
Q psy3652         208 LLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK--------------------------------  255 (394)
Q Consensus       208 ~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~--------------------------------  255 (394)
                      ++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++                                
T Consensus       242 ~lElGG~n~~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~rl~v~~~~~~f~~~l~~~~~~~~~G~~~~~~~~~Gp~i~  321 (477)
T TIGR01722       242 QALGGAKNHMVVMPDADKDAAADALVGAAYGAAGQRCMAISAAVLVGAADEWVPEIRERAEKIRIGPGDDPGAEMGPLIT  321 (477)
T ss_pred             EEECCCCCceEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeCcHHHHHHHHHHHHhcCCCCCCCCCCCCcCCCcC
Confidence            999999999999999999999999999999999999999999999998                                


Q ss_pred             --------------------------cC--C--CCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhc
Q psy3652         256 --------------------------KI--D--RPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNE  305 (394)
Q Consensus       256 --------------------------~~--~--~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~  305 (394)
                                                ..  +  .+|+|+.|||+.+++++|.+++||+||||++|++|+|++|||+++|+
T Consensus       322 ~~~~~~~~~~i~~a~~~Ga~il~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~V~~~~~~~eai~~~n~  401 (477)
T TIGR01722       322 PQAKDRVASLIAGGAAEGAEVLLDGRGYKVDGYEEGNWVGPTLLERVPPTMKAYQEEIFGPVLCVLEADTLEEAIALINA  401 (477)
T ss_pred             HHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeEECCEEeeCCCCCChhhhCCCCCCeEEEEEeCCHHHHHHHHhC
Confidence                                      00  0  24789999999999999999999999999999999999999999999


Q ss_pred             CCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCC--CCchHHHHHhhhheeEEEEec
Q psy3652         306 VKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGG--RESGSDSWKQYCRRSTVTINH  381 (394)
Q Consensus       306 ~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G--~~~g~~~l~~f~~~k~v~~~~  381 (394)
                      ++|||+++|||+|.+.+++++  .++++|.|+||+++....+.+||||+|.||+|  +++|.+++++|++.|++++++
T Consensus       402 ~~~gl~~~v~t~d~~~~~~~~--~~l~~g~v~iN~~~~~~~~~~pfgG~k~SG~G~~~~~g~~~l~~~~~~k~i~~~~  477 (477)
T TIGR01722       402 SPYGNGTAIFTRDGAAARRFQ--HEIEVGQVGVNVPIPVPLPYFSFTGWKDSFFGDHHIYGKQGTHFYTRGKTVTTRW  477 (477)
T ss_pred             CCCCCeEEEEcCCHHHHHHHH--HhCCeeeEEECCCCCCCCCCCCCCccccccCCCCccChHHHHHHhcCeeEEEEeC
Confidence            999999999999999999999  88999999999865555567899999999999  578999999999999998763

In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus.

>cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like

Probab=100.00  E-value=2.8e-71  Score=565.71  Aligned_cols=338  Identities=31%  Similarity=0.524  Sum_probs=310.8

Q ss_pred             eeCCeecc--CCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHH--HhhcCChhhHHHHHHHHHHHHhhCHHHHH
Q psy3652          40 YDGTSWKA--NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYA--AWAALPAPRRGEIVRQIGDALRHKLVPLG  115 (394)
Q Consensus        40 ~i~G~~~~--~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~  115 (394)
                      ||||+|..  ++.+++++||+||+++++++.++.+|+++++++|++||+  .|+.+|.++|.++|+++++.|++++++|+
T Consensus         1 ~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la   80 (482)
T cd07119           1 YIDGEWVEAASGKTRDIINPANGEVIATVPEGTAEDAKRAIAAARRAFDSGEWPHLPAQERAALLFRIADKIREDAEELA   80 (482)
T ss_pred             CCCCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence            69999973  467899999999999999999999999999999999997  59999999999999999999999999999


Q ss_pred             HHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh
Q psy3652         116 QLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL  195 (394)
Q Consensus       116 ~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL  195 (394)
                      +++++|+|||..+++.|+..+++.++++++..++..+...+.. .+...++.++|+|||++|+|||||+.+.++++++||
T Consensus        81 ~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~AL  159 (482)
T cd07119          81 RLETLNTGKTLRESEIDIDDVANCFRYYAGLATKETGEVYDVP-PHVISRTVREPVGVCGLITPWNYPLLQAAWKLAPAL  159 (482)
T ss_pred             HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCC-CCceEEEEEeeeeeEEEEcCCchHHHHHHHHHHHHH
Confidence            9999999999999999999999999999998877655543322 344567899999999999999999999999999999


Q ss_pred             -----------------------------------------------------------------hHHHHHh----hhhh
Q psy3652         196 -----------------------------------------------------------------VGVAVQS----RFGK  206 (394)
Q Consensus       196 -----------------------------------------------------------------~g~~i~~----~~~~  206 (394)
                                                                                       +|+.|++    +++|
T Consensus       160 aaGN~VilKps~~~p~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~  239 (482)
T cd07119         160 AAGNTVVIKPSEVTPLTTIALFELIEEAGLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTATGRSIMRAAAGNVKK  239 (482)
T ss_pred             hcCCEEEEECCccccHHHHHHHHHHHHcCCCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCc
Confidence                                                                             6677765    4679


Q ss_pred             hccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc-------------------------------
Q psy3652         207 LLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK-------------------------------  255 (394)
Q Consensus       207 ~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~-------------------------------  255 (394)
                      +++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++                               
T Consensus       240 ~~lElGGkn~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~~~~~~~~~gpl  319 (482)
T cd07119         240 VALELGGKNPNIVFADADFETAVDQALNGVFFNAGQVCSAGSRLLVEESIHDKFVAALAERAKKIKLGNGLDADTEMGPL  319 (482)
T ss_pred             EEEECCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCC
Confidence            9999999999999999999999999999999999999999999999999                               


Q ss_pred             ----------------------c-----C-C----CCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHH
Q psy3652         256 ----------------------K-----I-D----RPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWN  303 (394)
Q Consensus       256 ----------------------~-----~-~----~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~  303 (394)
                                            .     . .    ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++
T Consensus       320 i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~deai~~~  399 (482)
T cd07119         320 VSAEHREKVLSYIQLGKEEGARLVCGGKRPTGDELAKGYFVEPTIFDDVDRTMRIVQEEIFGPVLTVERFDTEEEAIRLA  399 (482)
T ss_pred             CCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCceECCEEEecCCCCChHhhCCCCCceEEEeccCCHHHHHHHH
Confidence                                  0     0 0    148899999999999999999999999999999999999999999


Q ss_pred             hcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEEec
Q psy3652         304 NEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTINH  381 (394)
Q Consensus       304 n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~~~  381 (394)
                      |+++|||++||||+|.+.+.+++  .++++|.|+||... ...+.+||||+|.||+|+++|++++++|++.|++++++
T Consensus       400 n~~~~gL~~~v~t~d~~~~~~~~--~~l~~G~v~iN~~~-~~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~v~~~~  474 (482)
T cd07119         400 NDTPYGLAGAVWTKDIARANRVA--RRLRAGTVWINDYH-PYFAEAPWGGYKQSGIGRELGPTGLEEYQETKHININL  474 (482)
T ss_pred             hCCCCCceEEEECCCHHHHHHHH--HhcCcceEEECCCC-CCCCCCCcCCcccCcCCccchHHHHHHHhceEEEEEec
Confidence            99999999999999999999999  88999999999864 34567899999999999999999999999999999886

Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde.

>cd07123 ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17

Probab=100.00  E-value=5.4e-71  Score=566.51  Aligned_cols=355  Identities=22%  Similarity=0.310  Sum_probs=312.8

Q ss_pred             hhhhhcCCCCCCCCCceeCCeeccCCCeeeeecCCC-CCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHH
Q psy3652          24 PFLKELGLSGSVNPGVYDGTSWKANGEIIPSINPST-GETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQ  102 (394)
Q Consensus        24 ~~~~~~~~~~~~~~~~~i~G~~~~~~~~~~v~nP~t-g~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~  102 (394)
                      ..++++... .....+||||+|+.++.+++++||+| |+++++++.++.+|+++||++|++||+.|+.+|..+|.++|++
T Consensus        21 ~~~~~~~~~-~~~~~~~i~G~~~~~~~~~~v~~P~~tg~~l~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~   99 (522)
T cd07123          21 EALAELKSL-TVEIPLVIGGKEVRTGNTGKQVMPHDHAHVLATYHYADAALVEKAIEAALEARKEWARMPFEDRAAIFLK   99 (522)
T ss_pred             HHHHHHhhh-ccccCeeECCEEcCCCCeEEEECCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence            345554443 24677899999987778999999995 9999999999999999999999999999999999999999999


Q ss_pred             HHHHHhh-CHHHHHHHHHHHcCCChHHhH-HHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccc-eeEEEEcc
Q psy3652         103 IGDALRH-KLVPLGQLVSLEMGKILAEGI-GEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPL-GVVGIISA  179 (394)
Q Consensus       103 ~a~~l~~-~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~-GVV~~I~p  179 (394)
                      ++++|++ ++++|++++++|+|||..++. .|+...++.++|+++.+.++.+...+....+...++.++|+ |||++|+|
T Consensus       100 ~a~~l~~~~~~ela~~~~~e~Gk~~~~a~~~~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~P  179 (522)
T cd07123         100 AADLLSGKYRYELNAATMLGQGKNVWQAEIDAACELIDFLRFNVKYAEELYAQQPLSSPAGVWNRLEYRPLEGFVYAVSP  179 (522)
T ss_pred             HHHHHHhhCHHHHHHHHHHhcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecCCceEEEECC
Confidence            9999996 899999999999999999985 48999999999999988776554333222244567889999 99999999


Q ss_pred             CCchhHhHHHHHHHHh----------------------------------------------------------------
Q psy3652         180 FNFPVAVYGWNAAIAL----------------------------------------------------------------  195 (394)
Q Consensus       180 ~N~P~~~~~~~~~~aL----------------------------------------------------------------  195 (394)
                      ||||+.+..+++++||                                                                
T Consensus       180 wNfP~~~~~~~~~palaGN~VVlKPs~~tp~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~V~FTGS~~  259 (522)
T cd07123         180 FNFTAIGGNLAGAPALMGNVVLWKPSDTAVLSNYLVYKILEEAGLPPGVINFVPGDGPVVGDTVLASPHLAGLHFTGSTP  259 (522)
T ss_pred             cccHHHHHHHHHHHHHhCCEEEEECCCCCCHHHHHHHHHHHHcCcCCCcEEEEecCchHHHHHHhcCCCcCEEEEECCHH
Confidence            9999999999999998                                                                


Q ss_pred             hHHHHHh----hhh------hhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc----------
Q psy3652         196 VGVAVQS----RFG------KLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK----------  255 (394)
Q Consensus       196 ~g~~i~~----~~~------~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~----------  255 (394)
                      +|+.|++    +++      ++++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++          
T Consensus       260 ~G~~i~~~aa~~l~~~~~~~~v~lElGGkn~~IV~~dAdl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~  339 (522)
T cd07123         260 TFKSLWKQIGENLDRYRTYPRIVGETGGKNFHLVHPSADVDSLVTATVRGAFEYQGQKCSAASRAYVPESLWPEVKERLL  339 (522)
T ss_pred             HHHHHHHHHHhhcccccccCCEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHH
Confidence            6777665    344      79999999999999999999999999999999999999999999999999          


Q ss_pred             ---------------------------------------c-C----------CCCCceecCeEEEcCCCCCccccccccc
Q psy3652         256 ---------------------------------------K-I----------DRPGYFVEPTIVTGLPHNSRVVHRETFA  285 (394)
Q Consensus       256 ---------------------------------------~-~----------~~~g~~~~Ptvl~~v~~~~~i~~eE~FG  285 (394)
                                                             . -          ...|+|+.|||+.+++++|++++||+||
T Consensus       340 ~~~~~l~~G~p~d~~t~~Gpli~~~~~~~v~~~v~~a~~~~Ga~vl~gg~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFG  419 (522)
T cd07123         340 EELKEIKMGDPDDFSNFMGAVIDEKAFDRIKGYIDHAKSDPEAEIIAGGKCDDSVGYFVEPTVIETTDPKHKLMTEEIFG  419 (522)
T ss_pred             HHHhhCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEeCCCcCCCCCceEcCEEEeCCCCCChhhhcCCCC
Confidence                                                   1 0          0137899999999999999999999999


Q ss_pred             ceEEEEeeCC--HHHHHHHHhcCC-CCcEEEEEcCCHHHHHHhhccccc--ceeEEEEcCCCCCC-CCCCCccCCCCCCC
Q psy3652         286 PIVYVFPFDS--LDEAITWNNEVK-QGLSSSIFTKDVTNLFKWLGPQGS--DCGLINVNIPTNGA-EIGGAFGGEKYTGG  359 (394)
Q Consensus       286 Pvl~v~~~~~--~~eAi~~~n~~~-~gLsa~v~t~d~~~a~~~~~~~~~--~~g~V~iN~~~~~~-~~~~pfGG~~~SG~  359 (394)
                      ||++|++|+|  +||||+++|++. |||++||||+|.+.+.+++  .++  ++|.|+||...... .+.+||||+|.||+
T Consensus       420 PVl~V~~~~~~~~~eai~~aN~~~~~gL~a~Vft~d~~~~~~~~--~~l~~~~G~v~iN~~~~~~~~~~~PfGG~k~SG~  497 (522)
T cd07123         420 PVLTVYVYPDSDFEETLELVDTTSPYALTGAIFAQDRKAIREAT--DALRNAAGNFYINDKPTGAVVGQQPFGGARASGT  497 (522)
T ss_pred             CeEEEEEeCCCCHHHHHHHHhCCCCcCceEEEEeCCHHHHHHHH--HhhhhcCcEEEECCCCCCCCCCCCCCCcchhcCC
Confidence            9999999994  799999999985 9999999999999999999  664  69999999864333 35689999999999


Q ss_pred             C-CCchHHHHHhhhheeEEEEec
Q psy3652         360 G-RESGSDSWKQYCRRSTVTINH  381 (394)
Q Consensus       360 G-~~~g~~~l~~f~~~k~v~~~~  381 (394)
                      | +++|.+++++|++.|+++...
T Consensus       498 gg~~~g~~~l~~~~~~k~~~~~~  520 (522)
T cd07123         498 NDKAGSPLNLLRWVSPRTIKETF  520 (522)
T ss_pred             CcccCCHHHHHHhcceEEEEEec
Confidence            6 999999999999999998764

Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences.

>PRK09406 gabD1 succinic semialdehyde dehydrogenase; Reviewed

Probab=100.00  E-value=3.4e-71  Score=560.19  Aligned_cols=325  Identities=29%  Similarity=0.431  Sum_probs=298.7

Q ss_pred             eeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCChHHhHH
Q psy3652          52 IPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIG  131 (394)
Q Consensus        52 ~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~  131 (394)
                      ++++||+||+++++++.++.+|+++++++|++||+.|+.+|.++|.++|++++++|++++++|++++++|+|||..++..
T Consensus         3 ~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~   82 (457)
T PRK09406          3 IATINPATGETVKTFTALTDDEVDAAIARAHARFRDYRTTTFAQRARWANAAADLLEAEADQVAALMTLEMGKTLASAKA   82 (457)
T ss_pred             eeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHhcCCCHHHHHH
Confidence            68899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhhhhccCcccCCC--CCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh--------------
Q psy3652         132 EVQEFIDICDYAVGLSRTYSGSILPSE--RPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL--------------  195 (394)
Q Consensus       132 ev~~~~~~l~~~a~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL--------------  195 (394)
                      |+..+++.++|+++.++++.+......  ..+...+++++|+|||++|+|||||+.+.++++++||              
T Consensus        83 ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwN~Pl~~~~~~~~~ALaaGN~VV~Kps~~~  162 (457)
T PRK09406         83 EALKCAKGFRYYAEHAEALLADEPADAAAVGASRAYVRYQPLGVVLAVMPWNFPLWQVVRFAAPALMAGNVGLLKHASNV  162 (457)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCccccccCCCCceEEEEEecceeEEEECCccchHHHHHHHHHHHHHcCCEEEEECCCcC
Confidence            999999999999998877654322211  1223467789999999999999999999999999999              


Q ss_pred             --------------------------------------------------hHHHHHh----hhhhhccccCCCCeEEEec
Q psy3652         196 --------------------------------------------------VGVAVQS----RFGKLLLELGGNNAIIVNE  221 (394)
Q Consensus       196 --------------------------------------------------~g~~i~~----~~~~~~lElgGk~p~iV~~  221 (394)
                                                                        +|+.|++    ++||+++|||||||+||++
T Consensus       163 p~~~~~l~~l~~~aGlP~gvv~~v~~g~~~~~~l~~~~~i~~V~fTGs~~~G~~i~~~a~~~~~~~~lElGG~~~~iV~~  242 (457)
T PRK09406        163 PQTALYLADLFRRAGFPDGCFQTLLVGSGAVEAILRDPRVAAATLTGSEPAGRAVAAIAGDEIKKTVLELGGSDPFIVMP  242 (457)
T ss_pred             cHHHHHHHHHHHHhCCCcCcEEEEcCCchhHHHHhcCCCcCEEEEECcHHHHHHHHHHHHhcCCceeeecCCCCeeEECC
Confidence                                                              7777765    5679999999999999999


Q ss_pred             CCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc----------------------------------------------
Q psy3652         222 DADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK----------------------------------------------  255 (394)
Q Consensus       222 dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~----------------------------------------------  255 (394)
                      |||++.|++.+++++|.|+||.|++++|||||++                                              
T Consensus       243 dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~~~~~i~~  322 (457)
T PRK09406        243 SADLDRAAETAVTARVQNNGQSCIAAKRFIVHADVYDAFAEKFVARMAALRVGDPTDPDTDVGPLATEQGRDEVEKQVDD  322 (457)
T ss_pred             CCCHHHHHHHHHHHHhhCCCCcccCCeEEEEcHHHHHHHHHHHHHHHhhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999                                              


Q ss_pred             -------------cCCCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcCCCCcEEEEEcCCHHHH
Q psy3652         256 -------------KIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNL  322 (394)
Q Consensus       256 -------------~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~~gLsa~v~t~d~~~a  322 (394)
                                   ..+..|+|++|||+.+++++|.+++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.+
T Consensus       323 a~~~Ga~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~  402 (457)
T PRK09406        323 AVAAGATILCGGKRPDGPGWFYPPTVITDITPDMRLYTEEVFGPVASLYRVADIDEAIEIANATTFGLGSNAWTRDEAEQ  402 (457)
T ss_pred             HHHCCCEEEeCCCcCCCCCceEccEEeecCCCCCHHhhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHH
Confidence                         0012488999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEE
Q psy3652         323 FKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTI  379 (394)
Q Consensus       323 ~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~  379 (394)
                      .+++  .++++|+|+||..+. ..+.+||||+|.||+|+++|.+++++|++.|++.+
T Consensus       403 ~~~~--~~l~~G~v~iN~~~~-~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~  456 (457)
T PRK09406        403 ERFI--DDLEAGQVFINGMTV-SYPELPFGGVKRSGYGRELSAHGIREFCNIKTVWI  456 (457)
T ss_pred             HHHH--HhCCcceEEECCCCC-CCCCCCCCCccccccCccchHHHHHHhhceEEEEe
Confidence            9999  889999999998653 45679999999999999999999999999999864

>TIGR01804 BADH glycine betaine aldehyde dehydrogenase

Probab=100.00  E-value=4e-71  Score=562.43  Aligned_cols=332  Identities=31%  Similarity=0.552  Sum_probs=304.5

Q ss_pred             eeCCeecc--CCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHH
Q psy3652          40 YDGTSWKA--NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQL  117 (394)
Q Consensus        40 ~i~G~~~~--~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~  117 (394)
                      ||||+|+.  ++.+++++||+||+++++++.++.+|+++++++|++||+.|+.+|.++|.++|++++++|++++++|+++
T Consensus         1 ~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~   80 (467)
T TIGR01804         1 FIDGEWVEASAGETREIINPANQEVIATVAEATREDVERAIAAARRAQGEWASMTPEERGRILRRIAELIRERNEELAKL   80 (467)
T ss_pred             CCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence            69999973  5688999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHcCCChHHh-HHHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh-
Q psy3652         118 VSLEMGKILAEG-IGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL-  195 (394)
Q Consensus       118 ~~~e~Gk~~~~a-~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL-  195 (394)
                      +++|+|||..++ ..|+..+++.++++++.+++..+...+...+ ...+..++|+|||++|+|||||+.+.++++++|| 
T Consensus        81 ~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~-~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALa  159 (467)
T TIGR01804        81 ETLDTGKTLEETSVADMDDIADVFEFFAGLADKDGGEIIPLPIP-SFSYTIREPLGVCVGIGAWNYPLQIASWKIAPALA  159 (467)
T ss_pred             HHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCCccccCCCC-ceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHHh
Confidence            999999999999 6799999999999999888766654433222 3457889999999999999999999999999999 


Q ss_pred             ----------------------------------------------------------------hHHHHHh----hhhhh
Q psy3652         196 ----------------------------------------------------------------VGVAVQS----RFGKL  207 (394)
Q Consensus       196 ----------------------------------------------------------------~g~~i~~----~~~~~  207 (394)
                                                                                      +|+.|++    ++||+
T Consensus       160 aGN~VvlKps~~tp~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~~~l~~~  239 (467)
T TIGR01804       160 AGNAMVFKPSEITPLTALKVAELMEEAGLPDGVFNVVLGKGAEVGEPLVNHKDVAKVSFTGGVPTGKKIMAAAADHLKHV  239 (467)
T ss_pred             cCCEEEeeCCccCcHHHHHHHHHHHHcCcCcCcEEEEeCCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcE
Confidence                                                                            6677765    45799


Q ss_pred             ccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc--------------------------------
Q psy3652         208 LLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK--------------------------------  255 (394)
Q Consensus       208 ~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~--------------------------------  255 (394)
                      ++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++                                
T Consensus       240 ~lElGG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli  319 (467)
T TIGR01804       240 TMELGGKSPLIVFDDADLELAVDQAMNGNFFSAGQVCSNGTRVFVHNKIKEKFEARLVERTKRIKLGDGFDEATEMGPLI  319 (467)
T ss_pred             EEecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCCCCCCCEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCccCccC
Confidence            999999999999999999999999999999999999999999999999                                


Q ss_pred             --------------------------cCC-----CCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHh
Q psy3652         256 --------------------------KID-----RPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNN  304 (394)
Q Consensus       256 --------------------------~~~-----~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n  304 (394)
                                                ...     ..|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|
T Consensus       320 ~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n  399 (467)
T TIGR01804       320 SAEHRDKVESYIEKGKEEGATLACGGKRPEREGLQNGFFIEPTVFTDCTDDMTIVREEIFGPVMTVLTFSSEDEVIARAN  399 (467)
T ss_pred             CHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCeEEeeEEEeCCCCCChHHhCCCCCceEEEEecCCHHHHHHHHh
Confidence                                      001     1378999999999999999999999999999999999999999999


Q ss_pred             cCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhhee
Q psy3652         305 EVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRS  375 (394)
Q Consensus       305 ~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k  375 (394)
                      +++|||+++|||+|..++++++  .++++|+|+||..+ ...+.+||||+|.||+|+++|.+++++|++.|
T Consensus       400 ~~~~gLsa~i~t~d~~~~~~~~--~~l~~G~v~iN~~~-~~~~~~pfGG~k~SG~G~~~g~~~~~~~~~~~  467 (467)
T TIGR01804       400 DTIYGLAAGVFTADLGRAHRVA--NQLKAGTVWINDFH-PYPAEAPWGGYKQSGIGRENGKAGLAEYTEVK  467 (467)
T ss_pred             CCCCCceEEEECCCHHHHHHHH--HhCCcceEEECCCC-CCCCCCCcCCcccCccCCCChHHHHHHHhccC
Confidence            9999999999999999999999  88999999999864 34567899999999999999999999999875

Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171).

>TIGR03250 PhnAcAld_DH putative phosphonoacetaldehyde dehydrogenase

Probab=100.00  E-value=7.8e-71  Score=559.97  Aligned_cols=340  Identities=25%  Similarity=0.391  Sum_probs=306.7

Q ss_pred             CCceeCCeeccCCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHH
Q psy3652          37 PGVYDGTSWKANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQ  116 (394)
Q Consensus        37 ~~~~i~G~~~~~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~  116 (394)
                      ..+||||+|..++.+++++||+||+++++++.++.+|+++|+++|++|+   +.++..+|.++|++++++|++++++|++
T Consensus         4 ~~~~i~g~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~---~~~~~~~R~~~l~~~a~~l~~~~~ela~   80 (472)
T TIGR03250         4 EALRIAGEKVSRDRVIEVRYPYNGTVVGTVPKASVDDVRRAFAIAAAYR---PTLTRYERSAILDRAAALLAARKEEISD   80 (472)
T ss_pred             CCceECCEEecCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHH---hhCCHHHHHHHHHHHHHHHHHhHHHHHH
Confidence            4579999998667889999999999999999999999999999999876   5789999999999999999999999999


Q ss_pred             HHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCcccCC----CCCCceeEeeeccc-eeEEEEccCCchhHhHHHHH
Q psy3652         117 LVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPS----ERPGHVLLENWNPL-GVVGIISAFNFPVAVYGWNA  191 (394)
Q Consensus       117 ~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~----~~~~~~~~~~~~P~-GVV~~I~p~N~P~~~~~~~~  191 (394)
                      ++++|+|||..+++.|+..+++.++|++..+.+..+...+.    ...+...++.++|+ |||++|+|||||+.+..+++
T Consensus        81 ~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~Gvv~~I~P~N~P~~~~~~~~  160 (472)
T TIGR03250        81 LITLESGLSKKDSLYEVGRVADVLTFAAAEALRDDGQIFSCDLTPHGKARKVFTQREPLLGVISAITPFNHPMNQVAHKI  160 (472)
T ss_pred             HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccCCCCCCceEEEEEcCCCCEEEEEcCCcHHHHHHHHHH
Confidence            99999999999999999999999999999887765543321    11234567889998 99999999999999999999


Q ss_pred             HHHh-----------------------------------------------------------------hHHHHHh--hh
Q psy3652         192 AIAL-----------------------------------------------------------------VGVAVQS--RF  204 (394)
Q Consensus       192 ~~aL-----------------------------------------------------------------~g~~i~~--~~  204 (394)
                      ++||                                                                 +|+.+++  .+
T Consensus       161 ~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~~  240 (472)
T TIGR03250       161 APAIATNNRMVVKPSEKTPLSALYLADILYEAGLPPQMLQVVTGDPREIADELITNPHVDLVTFTGGVAIGKYIAARAGY  240 (472)
T ss_pred             HHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcccEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhcC
Confidence            9999                                                                 6777765  34


Q ss_pred             hhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc-----------------------------
Q psy3652         205 GKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK-----------------------------  255 (394)
Q Consensus       205 ~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~-----------------------------  255 (394)
                      +|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++                             
T Consensus       241 ~~~~lElGGk~p~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~g  320 (472)
T TIGR03250       241 RRQVLELGGNDPLIVMEDADLDRAADLAVKGSYKNSGQRCTAVKRMLVQESVADRFTELLVEKTRAWRYGDPMDPSVDMG  320 (472)
T ss_pred             CceEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhhCCCCCCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCCCcCC
Confidence            799999999999999999999999999999999999999999999999999                             


Q ss_pred             -------------------------c--CCCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcCCC
Q psy3652         256 -------------------------K--IDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQ  308 (394)
Q Consensus       256 -------------------------~--~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~~  308 (394)
                                               .  ....|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|
T Consensus       321 pli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~aN~~~~  400 (472)
T TIGR03250       321 TVIDEAAAILFEARVNEAIAQGARLLLGNVRDGALYAPTVLDRVDPSMTLVREETFGPVSPVIRFCDIDDAIRISNSTAY  400 (472)
T ss_pred             CCCCHHHHHHHHHHHHHHHHCCCEEEECCCcCCEEEcCEEEeCCCCCChHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCc
Confidence                                     0  0124789999999999999999999999999999999999999999999999


Q ss_pred             CcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCC-CCchHHHHHhhhheeEEEEec
Q psy3652         309 GLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGG-RESGSDSWKQYCRRSTVTINH  381 (394)
Q Consensus       309 gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G-~~~g~~~l~~f~~~k~v~~~~  381 (394)
                      ||++||||+|.+++.+++  .++++|+||||..+....+.+||||+|.||+| +.+|.+++++|++.|++++++
T Consensus       401 gL~a~v~t~d~~~~~~~~--~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~l~~ft~~k~i~~~~  472 (472)
T TIGR03250       401 GLSSGVCTNRLDYITRFI--AELQVGTVNVWEVPGYRLELTPFGGIKDSGLGYKEGVQEAMKSFTNLKTYSLPW  472 (472)
T ss_pred             cceEEEEcCCHHHHHHHH--HHCCcceEEEcCCCCCCCCCCCCCccccccCCCCCChHHHHHHhhceEEEEEeC
Confidence            999999999999999999  88999999999765444455899999999999 567789999999999998764

It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme.

>cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like

Probab=100.00  E-value=6.9e-71  Score=561.23  Aligned_cols=337  Identities=33%  Similarity=0.526  Sum_probs=308.5

Q ss_pred             eeCCeecc--CCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHH
Q psy3652          40 YDGTSWKA--NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQL  117 (394)
Q Consensus        40 ~i~G~~~~--~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~  117 (394)
                      ||||+|+.  ++.+++++||+||+++++++.++.+|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|+++
T Consensus         1 ~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~   80 (468)
T cd07088           1 YINGEFVPSSSGETIDVLNPATGEVVATVPAATAEDADRAVDAAEAAQKAWERLPAIERAAYLRKLADLIRENADELAKL   80 (468)
T ss_pred             CCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence            69999973  5788999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh--
Q psy3652         118 VSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL--  195 (394)
Q Consensus       118 ~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL--  195 (394)
                      +++|+|||..+++.|+..+++.++++++++.++.+...+...++...+..++|+|||++|+|||||+.+.++++++||  
T Consensus        81 ~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~a~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~a  160 (468)
T cd07088          81 IVEEQGKTLSLARVEVEFTADYIDYMAEWARRIEGEIIPSDRPNENIFIFKVPIGVVAGILPWNFPFFLIARKLAPALVT  160 (468)
T ss_pred             HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCccccceeEEEEecceeEEEEccCchHHHHHHHHHHHHHHc
Confidence            999999999999999999999999999988776665444322344567789999999999999999999999999999  


Q ss_pred             ---------------------------------------------------------------hHHHHHh----hhhhhc
Q psy3652         196 ---------------------------------------------------------------VGVAVQS----RFGKLL  208 (394)
Q Consensus       196 ---------------------------------------------------------------~g~~i~~----~~~~~~  208 (394)
                                                                                     +|+.|++    +++|++
T Consensus       161 GN~VVlKps~~~p~~~~~l~~~~~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~  240 (468)
T cd07088         161 GNTIVIKPSEETPLNALEFAELVDEAGLPAGVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQKIMEAAAENITKVS  240 (468)
T ss_pred             CCEEEEECCCcchHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEE
Confidence                                                                           5666654    567999


Q ss_pred             cccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc---------------------------------
Q psy3652         209 LELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK---------------------------------  255 (394)
Q Consensus       209 lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~---------------------------------  255 (394)
                      +|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++                                 
T Consensus       241 lelGG~~~~iV~~dadl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~  320 (468)
T cd07088         241 LELGGKAPAIVMKDADLDLAVKAIVDSRIINCGQVCTCAERVYVHEDIYDEFMEKLVEKMKAVKVGDPFDAATDMGPLVN  320 (468)
T ss_pred             EECCCCCeEEECCCCCHHHHHHHHHHHHhcccCcCCcCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCccCcccC
Confidence            99999999999999999999999999999999999999999999999                                 


Q ss_pred             -------------------------cCC--CCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcCCC
Q psy3652         256 -------------------------KID--RPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQ  308 (394)
Q Consensus       256 -------------------------~~~--~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~~  308 (394)
                                               ...  ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|
T Consensus       321 ~~~~~~~~~~i~~a~~~ga~vl~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~  400 (468)
T cd07088         321 EAALDKVEEMVERAVEAGATLLTGGKRPEGEKGYFYEPTVLTNVRQDMEIVQEEIFGPVLPVVKFSSLDEAIELANDSEY  400 (468)
T ss_pred             HHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceeEcCEEEecCCCCCchhhCCCcCCeEEEEecCCHHHHHHHHhCCCC
Confidence                                     000  24889999999999999999999999999999999999999999999999


Q ss_pred             CcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEE
Q psy3652         309 GLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTI  379 (394)
Q Consensus       309 gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~  379 (394)
                      ||+++|||+|.+++++++  .++++|.|+||++... ....||||+|.||+|+++|++++++|++.|++.+
T Consensus       401 gL~~~v~t~d~~~~~~~~--~~l~~g~v~iN~~~~~-~~~~p~gG~k~SG~G~~~g~~~l~~~t~~k~v~~  468 (468)
T cd07088         401 GLTSYIYTENLNTAMRAT--NELEFGETYINRENFE-AMQGFHAGWKKSGLGGADGKHGLEEYLQTKVVYL  468 (468)
T ss_pred             CceEEEECCCHHHHHHHH--HhCCcceEEECCCCCC-CCCCCcCCcccccCCcCchHHHHHHHhceeEEeC
Confidence            999999999999999999  8899999999986533 3456999999999999999999999999998853

Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD.

>cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins

Probab=100.00  E-value=5.8e-71  Score=562.53  Aligned_cols=339  Identities=30%  Similarity=0.534  Sum_probs=308.4

Q ss_pred             CCceeCCeecc--CCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhh--cCChhhHHHHHHHHHHHHhhCHH
Q psy3652          37 PGVYDGTSWKA--NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWA--ALPAPRRGEIVRQIGDALRHKLV  112 (394)
Q Consensus        37 ~~~~i~G~~~~--~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~--~~~~~~R~~~L~~~a~~l~~~~~  112 (394)
                      .++||||+|+.  ++.+++++||+||+++++++.++.+|++.++++|++||+.|+  .+|.++|.++|+++++.|+++++
T Consensus         4 ~~~~I~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~   83 (476)
T cd07091           4 TGLFINNEFVDSVSGKTFPTINPATEEVICQVAEADEEDVDAAVKAARAAFETGWWRKMDPRERGRLLNKLADLIERDRD   83 (476)
T ss_pred             ccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHH
Confidence            46899999973  567899999999999999999999999999999999999854  99999999999999999999999


Q ss_pred             HHHHHHHHHcCCChHHh-HHHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHH
Q psy3652         113 PLGQLVSLEMGKILAEG-IGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNA  191 (394)
Q Consensus       113 ~l~~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~  191 (394)
                      +|++++++|+|||..++ ..|+..+++.+++++++.++..+...+.. .+...++.++|+|||++|+|||||+.+.++++
T Consensus        84 ~la~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~  162 (476)
T cd07091          84 ELAALESLDNGKPLEESAKGDVALSIKCLRYYAGWADKIQGKTIPID-GNFLAYTRREPIGVCGQIIPWNFPLLMLAWKL  162 (476)
T ss_pred             HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCC-CCceEEEEEeceeEEEEECCCcCHHHHHHHHH
Confidence            99999999999998666 56999999999999988877666543322 34456789999999999999999999999999


Q ss_pred             HHHh-----------------------------------------------------------------hHHHHHh----
Q psy3652         192 AIAL-----------------------------------------------------------------VGVAVQS----  202 (394)
Q Consensus       192 ~~aL-----------------------------------------------------------------~g~~i~~----  202 (394)
                      ++||                                                                 +|+.|++    
T Consensus       163 ~~AL~aGN~VvlKps~~~p~~~~~l~~~~~~aglP~g~~~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~g~~v~~~aa~  242 (476)
T cd07091         163 APALAAGNTVVLKPAEQTPLSALYLAELIKEAGFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTGSTAVGRTIMEAAAK  242 (476)
T ss_pred             HHHHHcCCEEEEeCCCCChHHHHHHHHHHHHcCcCCCcEEEEeCCChhHHHHHhcCCCcCEEEEECcHHHHHHHHHHHHh
Confidence            9999                                                                 6677664    


Q ss_pred             -hhhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc--------------------------
Q psy3652         203 -RFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK--------------------------  255 (394)
Q Consensus       203 -~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~--------------------------  255 (394)
                       +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++                          
T Consensus       243 ~~~~~~~lElgG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~L~~~~~~~~~g~p~~~~~  322 (476)
T cd07091         243 SNLKKVTLELGGKSPNIVFDDADLDKAVEWAAFGIFFNQGQCCCAGSRIFVQESIYDEFVEKFKARAEKRVVGDPFDPDT  322 (476)
T ss_pred             cCCceEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHHHHHHHHHHHHHHHhhCCCCCCCCCCC
Confidence             45689999999999999999999999999999999999999999999999999                          


Q ss_pred             ---------------------------c------CCCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHH
Q psy3652         256 ---------------------------K------IDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITW  302 (394)
Q Consensus       256 ---------------------------~------~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~  302 (394)
                                                 .      ....|+|+.|||+.+++++|++++||+||||++|++|+|+||||++
T Consensus       323 ~~gpli~~~~~~~v~~~i~~a~~~ga~vl~gg~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~  402 (476)
T cd07091         323 FQGPQVSKAQFDKILSYIESGKKEGATLLTGGERHGSKGYFIQPTVFTDVKDDMKIAKEEIFGPVVTILKFKTEDEVIER  402 (476)
T ss_pred             cCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceECcEEecCCCCCChhhhCCCCCCeEEEeecCCHHHHHHH
Confidence                                       0      0124789999999999999999999999999999999999999999


Q ss_pred             HhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEE
Q psy3652         303 NNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTI  379 (394)
Q Consensus       303 ~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~  379 (394)
                      +|+++|||++||||+|.+++++++  .++++|+|+||+.+ ...+.+||||+|.||+|+++|.+++++|++.|++++
T Consensus       403 ~n~~~~gLsa~v~t~d~~~~~~~~--~~l~~g~v~iN~~~-~~~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~~~~  476 (476)
T cd07091         403 ANDTEYGLAAGVFTKDINKALRVS--RALKAGTVWVNTYN-VFDAAVPFGGFKQSGFGRELGEEGLEEYTQVKAVTI  476 (476)
T ss_pred             HhCCCCCceEEEECCCHHHHHHHH--HhcCcceEEECCCC-CCCCCCCcCCcccCcCCccchHHHHHHhhceeEEeC
Confidence            999999999999999999999999  88999999999864 456779999999999999999999999999998853

ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co

>TIGR01236 D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehydrogenase, group 1

Probab=100.00  E-value=7.1e-71  Score=565.62  Aligned_cols=355  Identities=23%  Similarity=0.348  Sum_probs=315.2

Q ss_pred             hhhhhcCCCCCCCCCceeCCeecc-CCCeeeeecCCC-CCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHH
Q psy3652          24 PFLKELGLSGSVNPGVYDGTSWKA-NGEIIPSINPST-GETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVR  101 (394)
Q Consensus        24 ~~~~~~~~~~~~~~~~~i~G~~~~-~~~~~~v~nP~t-g~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~  101 (394)
                      +.++++... .....+||||+|+. ++.+++++||.| |+++++++.++.+|+++|+++|++||+.|+.+|..+|.++|+
T Consensus        20 ~~~~~~~~~-~~~~~~~i~G~~~~~~~~~~~~~nP~t~g~~i~~~~~~~~~~v~~av~~A~~a~~~W~~~~~~~R~~~L~   98 (533)
T TIGR01236        20 AELKELKSH-PIEIPLVIGGEEVMGSGERIDQVQPHNHQAVLAKATNATEEDAAKAVEAALDAKKDWSALPFYDRAAIFL   98 (533)
T ss_pred             HHHHHHhhc-CeeeceeECCEEecCCCCEEEEECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHH
Confidence            566666666 56778999999984 567899999997 899999999999999999999999999999999999999999


Q ss_pred             HHHHHHh-hCHHHHHHHHHHHcCCChHHhHHH-HHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccc-eeEEEEc
Q psy3652         102 QIGDALR-HKLVPLGQLVSLEMGKILAEGIGE-VQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPL-GVVGIIS  178 (394)
Q Consensus       102 ~~a~~l~-~~~~~l~~~~~~e~Gk~~~~a~~e-v~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~-GVV~~I~  178 (394)
                      +++++|+ +++++|++++++|+|||+.+++.| +...++.++|++++++++.+.......++...++.++|+ |||++|+
T Consensus        99 k~a~~l~~~~~~~la~~~~~e~GK~~~~a~~e~v~~~i~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~  178 (533)
T TIGR01236        99 KAADLLSGPYREEILAATMLGQSKNVYQAEIDAVAELIDFFRFNVKYARELYEQQPSESAPGEWNRTDYRPLEGFVYAIS  178 (533)
T ss_pred             HHHHHHHhhcHHHHHHHHHHHcCCcHHHHhHhHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecCCCEEEEEe
Confidence            9999999 599999999999999999999875 999999999999988777554331112344567889999 9999999


Q ss_pred             cCCchhHhHHHHHHHHh---------------------------------------------------------------
Q psy3652         179 AFNFPVAVYGWNAAIAL---------------------------------------------------------------  195 (394)
Q Consensus       179 p~N~P~~~~~~~~~~aL---------------------------------------------------------------  195 (394)
                      |||||+.+..+++++||                                                               
T Consensus       179 PwN~P~~~~~~~~a~ALaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~g~~Lv~~p~v~~V~FTGS~  258 (533)
T TIGR01236       179 PFNFTAIAGNLPGAPALMGNTVIWKPSITATLSNYLTMRILEEAGLPPGVINFVPGDGFAVSDVVLADPRLAGIHFTGST  258 (533)
T ss_pred             CCchHHHHHHHHHHHHHhCCeEEEECCCcCCHHHHHHHHHHHhcCCCCCcEEEEecCcHHHHHHHhcCCCcCEEEEECCH
Confidence            99999999999999996                                                               


Q ss_pred             -hHHHHHh----hhh------hhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc---------
Q psy3652         196 -VGVAVQS----RFG------KLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK---------  255 (394)
Q Consensus       196 -~g~~i~~----~~~------~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~---------  255 (394)
                       +|+.|++    +++      ++++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++         
T Consensus       259 ~~G~~i~~~aa~~l~~~~~~~~v~lElGGknp~IV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l  338 (533)
T TIGR01236       259 ATFKHLWKWVASNLDRYHNFPRIVGETGGKDFHVVHPSADIDHAVTATIRGAFEYQGQKCSAASRLYVPHSVWPRFKDEL  338 (533)
T ss_pred             HHHHHHHHHHHhhccccccCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCCCcCCeeEEEchhHHHHHHHHH
Confidence             6777665    344      38999999999999999999999999999999999999999999999999         


Q ss_pred             -----------------------------------------c----------C-CCCCceecCeEEEcCCCCCccccccc
Q psy3652         256 -----------------------------------------K----------I-DRPGYFVEPTIVTGLPHNSRVVHRET  283 (394)
Q Consensus       256 -----------------------------------------~----------~-~~~g~~~~Ptvl~~v~~~~~i~~eE~  283 (394)
                                                               .          . ...|+|++|||+.+++++|++++||+
T Consensus       339 ~~~~~~l~~G~p~d~~t~~Gpli~~~~~~~v~~~i~~a~~~Ga~a~vl~GG~~~~~~G~~~~PTvl~~~~~d~~i~~eE~  418 (533)
T TIGR01236       339 LAELAEVKVGDPDDFSNFMGAVIDERSFVKNVKYIERAKGDPAELTILYGGKYDDSEGYFVEPTVILSKDPTDPLMVEEI  418 (533)
T ss_pred             HHHHhcCCcCCCCCCCCcccccCCHHHHHHHHHHHHHHHhcCCceEEEeCCCcCCCCCeEEeeEEEecCCCCChhhcccC
Confidence                                                     0          0 12389999999999999999999999


Q ss_pred             ccceEEEEeeCC--HHHHHHHH-hcCCCCcEEEEEcCCHHHHHHhhcccccc--eeEEEEcCCCCCC-CCCCCccCCCCC
Q psy3652         284 FAPIVYVFPFDS--LDEAITWN-NEVKQGLSSSIFTKDVTNLFKWLGPQGSD--CGLINVNIPTNGA-EIGGAFGGEKYT  357 (394)
Q Consensus       284 FGPvl~v~~~~~--~~eAi~~~-n~~~~gLsa~v~t~d~~~a~~~~~~~~~~--~g~V~iN~~~~~~-~~~~pfGG~~~S  357 (394)
                      ||||++|++|+|  ++|||+++ |+++|||+++|||+|.+.+.+++  .+++  +|+|+||...... .+.+||||+|.|
T Consensus       419 FGPVl~v~~~~~~~~~eai~~~~n~~~~gL~a~Vft~d~~~a~~~~--~~l~~~~G~v~IN~~~~~~~~~~~PfGG~k~S  496 (533)
T TIGR01236       419 FGPVLTVYVYPDDKYKEILDVVDSTSRYGLTGAVFAKDRQAILEAD--KRLRFAAGNFYINDKPTGAVVGQQPFGGARGS  496 (533)
T ss_pred             CCCeEEEEEeCCCCHHHHHHHHhcCCCcCceEEEEeCCHHHHHHHH--HHhhhcCcEEEECCCCCCCCCCCCCCCCcccc
Confidence            999999999998  59999999 89999999999999999999999  6665  9999999754433 356899999999


Q ss_pred             CCC-CCchHHHHHhhhheeEEEEec
Q psy3652         358 GGG-RESGSDSWKQYCRRSTVTINH  381 (394)
Q Consensus       358 G~G-~~~g~~~l~~f~~~k~v~~~~  381 (394)
                      |+| +++|.+++++|++.|+++...
T Consensus       497 G~G~~~~g~~~l~~f~~~k~v~~~~  521 (533)
T TIGR01236       497 GTNDKAGGPLNLLRWTSARSIKETF  521 (533)
T ss_pred             cCCcccCCHHHHHHhcceEEEEEEc
Confidence            998 999999999999999998875

This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate.

>cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like

Probab=100.00  E-value=2.6e-70  Score=559.87  Aligned_cols=345  Identities=26%  Similarity=0.440  Sum_probs=312.2

Q ss_pred             CCCCCceeCCeeccCCCeeeeecCC-CCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHH
Q psy3652          34 SVNPGVYDGTSWKANGEIIPSINPS-TGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLV  112 (394)
Q Consensus        34 ~~~~~~~i~G~~~~~~~~~~v~nP~-tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~  112 (394)
                      +...++||+|+|+.++.+++++||. ||+++++++.++.+|+++++++|++||+.|+.+|.++|.++|++++++|+++++
T Consensus        16 ~~~~~~~i~g~~~~~~~~~~~~~P~~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~   95 (500)
T cd07083          16 GRAYPLVIGGEWVDTKERMVSVSPFAPSEVVGTTAKADKAEAEAALEAAWAAFKTWKDWPQEDRARLLLKAADLLRRRRR   95 (500)
T ss_pred             cccccceECCEEecCCCceEeeCCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHH
Confidence            4567799999998777889999998 699999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCcccC-CCCCCceeEeeeccceeEEEEccCCchhHhHHHHH
Q psy3652         113 PLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILP-SERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNA  191 (394)
Q Consensus       113 ~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~-~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~  191 (394)
                      +|++++++|+|||..++..|+..+++.++++++.+.++.+.... ....+...++.++|+|||++|+|||||+.+.++++
T Consensus        96 ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~  175 (500)
T cd07083          96 ELIATLTYEVGKNWVEAIDDVAEAIDFIRYYARAALRLRYPAVEVVPYPGEDNESFYVGLGAGVVISPWNFPVAIFTGMI  175 (500)
T ss_pred             HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCCceEEEEEeccceEEEEcCCccHHHHHHHHH
Confidence            99999999999999999999999999999999988777554321 11234456778999999999999999999999999


Q ss_pred             HHHh-----------------------------------------------------------------hHHHHHh----
Q psy3652         192 AIAL-----------------------------------------------------------------VGVAVQS----  202 (394)
Q Consensus       192 ~~aL-----------------------------------------------------------------~g~~i~~----  202 (394)
                      ++||                                                                 +|+.|++    
T Consensus       176 ~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~eaGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~v~~~aa~  255 (500)
T cd07083         176 VAPVAVGNTVIAKPAEDAVVVGYKVFEIFHEAGFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTGSLETGKKIYEAAAR  255 (500)
T ss_pred             HHHHHcCCeEEEeCCCcchHHHHHHHHHHHHcCCCCCceEEEeCCCchhHHHHhcCCCcCEEEEECcHHHHHHHHHHHhh
Confidence            9999                                                                 6666664    


Q ss_pred             hh------hhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc---------------------
Q psy3652         203 RF------GKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK---------------------  255 (394)
Q Consensus       203 ~~------~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~---------------------  255 (394)
                      ++      +|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++                     
T Consensus       256 ~~~~~~~~~~v~lElgG~~~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p  335 (500)
T cd07083         256 LAPGQTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAFGFQGQKCSAASRLILTQGAYEPVLERLLKRAERLSVGPP  335 (500)
T ss_pred             ccccccccCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHcCCCCCC
Confidence            33      899999999999999999999999999999999999999999999999999                     


Q ss_pred             -------------------------------------cCCCCCceecCeEEEcCCCCCcccccccccceEEEEeeC--CH
Q psy3652         256 -------------------------------------KIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFD--SL  296 (394)
Q Consensus       256 -------------------------------------~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~--~~  296 (394)
                                                           ..+..|+|+.|||+.+++++|++++||+||||++|++|+  |+
T Consensus       336 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~g~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~d~~~  415 (500)
T cd07083         336 EENGTDLGPVIDAEQEAKVLSYIEHGKNEGQLVLGGKRLEGEGYFVAPTVVEEVPPKARIAQEEIFGPVLSVIRYKDDDF  415 (500)
T ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHHHhCCEEEeCCCcCCCCCeEEccEEEeCCCCCChHhhCCCCCceEEEEEeCCCCH
Confidence                                                 001137899999999999999999999999999999999  99


Q ss_pred             HHHHHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCC-CCCCccCCCCCCCC-CCchHHHHHhhhhe
Q psy3652         297 DEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAE-IGGAFGGEKYTGGG-RESGSDSWKQYCRR  374 (394)
Q Consensus       297 ~eAi~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~-~~~pfGG~~~SG~G-~~~g~~~l~~f~~~  374 (394)
                      ||||+++|+++|||+++|||+|.+.+.+++  .++++|+|+||....... +.+||||+|.||+| +.+|.+++++|++.
T Consensus       416 ~eai~~~n~~~~gL~~~v~t~d~~~~~~~~--~~l~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~~~~~  493 (500)
T cd07083         416 AEALEVANSTPYGLTGGVYSRKREHLEEAR--REFHVGNLYINRKITGALVGVQPFGGFKLSGTNAKTGGPHYLRRFLEM  493 (500)
T ss_pred             HHHHHHHhCCCCCceEEEEeCCHHHHHHHH--HhCCeeEEEECCCCCCCCCCCCCCCccccccCCCcccCHHHHHHhhhe
Confidence            999999999999999999999999999999  889999999998654333 45899999999999 68899999999999


Q ss_pred             eEEEEe
Q psy3652         375 STVTIN  380 (394)
Q Consensus       375 k~v~~~  380 (394)
                      |+++..
T Consensus       494 k~~~~~  499 (500)
T cd07083         494 KAVAER  499 (500)
T ss_pred             eEEEEc
Confidence            998754

ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH.

>cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like

Probab=100.00  E-value=1.3e-70  Score=559.49  Aligned_cols=335  Identities=29%  Similarity=0.492  Sum_probs=304.7

Q ss_pred             ceeCCeecc--CCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHH--hhcCChhhHHHHHHHHHHHHhhCHHHH
Q psy3652          39 VYDGTSWKA--NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAA--WAALPAPRRGEIVRQIGDALRHKLVPL  114 (394)
Q Consensus        39 ~~i~G~~~~--~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~--w~~~~~~~R~~~L~~~a~~l~~~~~~l  114 (394)
                      +||||+|+.  ++.+++++||+||+++++++.++.+|+++|+++|++||+.  |+.+|.++|.++|++++++|++++++|
T Consensus         1 ~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~el   80 (471)
T cd07139           1 LFIGGRWVAPSGSETIDVVSPATEEVVGRVPEATPADVDAAVAAARRAFDNGPWPRLSPAERAAVLRRLADALEARADEL   80 (471)
T ss_pred             CeECCEeecCCCCCeEEeECCCCCCEeEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence            589999973  4578999999999999999999999999999999999985  999999999999999999999999999


Q ss_pred             HHHHHHHcCCChHHhH-HHHHHHHHHHHHHHHhhhhccCc-ccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHH
Q psy3652         115 GQLVSLEMGKILAEGI-GEVQEFIDICDYAVGLSRTYSGS-ILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAA  192 (394)
Q Consensus       115 ~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~~~-~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~  192 (394)
                      ++++++|+|||..++. .|+..+++.++++++.++.+.+. ..+.. .+...++.++|+|||++|+|||||+.+.+++++
T Consensus        81 a~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~i~  159 (471)
T cd07139          81 ARLWTAENGMPISWSRRAQGPGPAALLRYYAALARDFPFEERRPGS-GGGHVLVRREPVGVVAAIVPWNAPLFLAALKIA  159 (471)
T ss_pred             HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCC-CCceEEEEEEeccEEEEEcCCchHHHHHHHHHH
Confidence            9999999999998875 59999999999999988765432 22221 234457889999999999999999999999999


Q ss_pred             HHh----------------------------------------------------------------hHHHHHh----hh
Q psy3652         193 IAL----------------------------------------------------------------VGVAVQS----RF  204 (394)
Q Consensus       193 ~aL----------------------------------------------------------------~g~~i~~----~~  204 (394)
                      +||                                                                +|+.|++    ++
T Consensus       160 ~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~~~~~~  239 (471)
T cd07139         160 PALAAGCTVVLKPSPETPLDAYLLAEAAEEAGLPPGVVNVVPADREVGEYLVRHPGVDKVSFTGSTAAGRRIAAVCGERL  239 (471)
T ss_pred             HHHhcCCEEEEECCCcCCHHHHHHHHHHHHcCCCCCcEEEEeCCHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcC
Confidence            999                                                                6666654    56


Q ss_pred             hhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc-----------------------------
Q psy3652         205 GKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK-----------------------------  255 (394)
Q Consensus       205 ~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~-----------------------------  255 (394)
                      +|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++                             
T Consensus       240 ~~~~lElGG~np~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~g  319 (471)
T cd07139         240 ARVTLELGGKSAAIVLDDADLDAAVPGLVPASLMNNGQVCVALTRILVPRSRYDEVVEALAAAVAALKVGDPLDPATQIG  319 (471)
T ss_pred             CEEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCC
Confidence            789999999999999999999999999999999999999999999999999                             


Q ss_pred             ------------------------c-----CC---CCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHH
Q psy3652         256 ------------------------K-----ID---RPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWN  303 (394)
Q Consensus       256 ------------------------~-----~~---~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~  303 (394)
                                              .     ..   ..|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++
T Consensus       320 pli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~  399 (471)
T cd07139         320 PLASARQRERVEGYIAKGRAEGARLVTGGGRPAGLDRGWFVEPTLFADVDNDMRIAQEEIFGPVLSVIPYDDEDDAVRIA  399 (471)
T ss_pred             CCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEEccEEEecCCCcchHHhCccCCCeEEEeecCCHHHHHHHH
Confidence                                    0     01   137899999999999999999999999999999999999999999


Q ss_pred             hcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEE
Q psy3652         304 NEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVT  378 (394)
Q Consensus       304 n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~  378 (394)
                      |+++|||+++|||+|.+.+.+++  .++++|.|+||++.  ..+.+||||+|.||+|+++|.+++++|++.|+++
T Consensus       400 n~~~~gL~a~i~s~d~~~~~~~~--~~l~~G~v~iN~~~--~~~~~PfgG~k~SG~G~~~g~~~~~~ft~~k~i~  470 (471)
T cd07139         400 NDSDYGLSGSVWTADVERGLAVA--RRIRTGTVGVNGFR--LDFGAPFGGFKQSGIGREGGPEGLDAYLETKSIY  470 (471)
T ss_pred             hCCCCCceEEEEcCCHHHHHHHH--HhCCcceEEECCCC--CCCCCCCCCcccccCCccchHHHHHHHhceeEEe
Confidence            99999999999999999999999  88999999999864  4567999999999999999999999999999985

The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD.

>PRK09407 gabD2 succinic semialdehyde dehydrogenase; Reviewed

Probab=100.00  E-value=2.4e-70  Score=562.32  Aligned_cols=343  Identities=29%  Similarity=0.423  Sum_probs=311.0

Q ss_pred             CCceeCCeeccCCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHH
Q psy3652          37 PGVYDGTSWKANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQ  116 (394)
Q Consensus        37 ~~~~i~G~~~~~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~  116 (394)
                      .+++|.|.|..++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|++++++|++++++|++
T Consensus        19 ~~~~~~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~   98 (524)
T PRK09407         19 LRRLTARVDGAAGPTREVTAPFTGEPLATVPVSTAADVEAAFARARAAQRAWAATPVRERAAVLLRFHDLVLENREELLD   98 (524)
T ss_pred             HHHHHhhcCCCCCCEEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHH
Confidence            44678888878889999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCccc-CCC-CCCceeEeeeccceeEEEEccCCchhHhHHHHHHHH
Q psy3652         117 LVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSIL-PSE-RPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIA  194 (394)
Q Consensus       117 ~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~-~~~-~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~a  194 (394)
                      ++++|+|||..++..|+..+++.++|++..++++.+... ... ......+..++|+|||++|+|||||+.+.++++++|
T Consensus        99 ~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~Pl~~~~~~~~~A  178 (524)
T PRK09407         99 LVQLETGKARRHAFEEVLDVALTARYYARRAPKLLAPRRRAGALPVLTKTTELRQPKGVVGVISPWNYPLTLAVSDAIPA  178 (524)
T ss_pred             HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccccCCCCceEEEEEecceEEEEEeCCCChHHHHHHHHHHH
Confidence            999999999999999999999999999988877544322 111 112356778999999999999999999999999999


Q ss_pred             h---------------------------------------------------------------hHHHHHh----hhhhh
Q psy3652         195 L---------------------------------------------------------------VGVAVQS----RFGKL  207 (394)
Q Consensus       195 L---------------------------------------------------------------~g~~i~~----~~~~~  207 (394)
                      |                                                               +|++|++    +++|+
T Consensus       179 LaaGN~VIlKPs~~tp~~~~~l~~ll~eaGlP~gvv~~v~g~~~~~~~~L~~~~d~V~fTGs~~~g~~v~~~aa~~~~~v  258 (524)
T PRK09407        179 LLAGNAVVLKPDSQTPLTALAAVELLYEAGLPRDLWQVVTGPGPVVGTALVDNADYLMFTGSTATGRVLAEQAGRRLIGF  258 (524)
T ss_pred             HHcCCEEEEECCCCCHHHHHHHHHHHHHcCCCcccEEEEecCCchHHHHHHhcCCEEEEECCHHHHHHHHHHHHhcCCcE
Confidence            9                                                               6777765    45789


Q ss_pred             ccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc--------------------------------
Q psy3652         208 LLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK--------------------------------  255 (394)
Q Consensus       208 ~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~--------------------------------  255 (394)
                      ++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++                                
T Consensus       259 ~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~sGQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli  338 (524)
T PRK09407        259 SLELGGKNPMIVLDDADLDKAAAGAVRACFSNAGQLCISIERIYVHESIYDEFVRAFVAAVRAMRLGAGYDYSADMGSLI  338 (524)
T ss_pred             EEECCCCceeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCcCCccCCCC
Confidence            999999999999999999999999999999999999999999999999                                


Q ss_pred             ---------------------cC-----C--CCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcCC
Q psy3652         256 ---------------------KI-----D--RPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVK  307 (394)
Q Consensus       256 ---------------------~~-----~--~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~  307 (394)
                                           .+     .  ..|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++
T Consensus       339 ~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~deai~~~N~~~  418 (524)
T PRK09407        339 SEAQLETVSAHVDDAVAKGATVLAGGKARPDLGPLFYEPTVLTGVTPDMELAREETFGPVVSVYPVADVDEAVERANDTP  418 (524)
T ss_pred             CHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCceEeCEEEeCCCCCChHHhCCCCCCeEEEEeeCCHHHHHHHHhCCC
Confidence                                 00     0  1368999999999999999999999999999999999999999999999


Q ss_pred             CCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCC--CCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEEec
Q psy3652         308 QGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNG--AEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTINH  381 (394)
Q Consensus       308 ~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~--~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~~~  381 (394)
                      |||++||||+|.+++++++  .++++|.|+||.+...  ..+.+||||+|.||+|+++|.+++++|++.|+|++++
T Consensus       419 ~gLsa~V~t~d~~~a~~~~--~~l~~G~v~IN~~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~ft~~k~v~~~~  492 (524)
T PRK09407        419 YGLNASVWTGDTARGRAIA--ARIRAGTVNVNEGYAAAWGSVDAPMGGMKDSGLGRRHGAEGLLKYTESQTIATQR  492 (524)
T ss_pred             CCceEEEECCCHHHHHHHH--HhCCcceEEECCCCCcCcCCCCCCCCCccccccCccchHHHHHHhCCeEEEEEcc
Confidence            9999999999999999999  8899999999986432  3456899999999999999999999999999998875

>cd07128 ALDH_MaoC-N N-terminal domain of the monoamine oxidase C dehydratase

Probab=100.00  E-value=1.6e-70  Score=559.70  Aligned_cols=337  Identities=26%  Similarity=0.309  Sum_probs=298.8

Q ss_pred             CceeCCeec-cCCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHH-HHHhhcCChhhHHHHHHHHHHHHhhCHHHHH
Q psy3652          38 GVYDGTSWK-ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAA-YAAWAALPAPRRGEIVRQIGDALRHKLVPLG  115 (394)
Q Consensus        38 ~~~i~G~~~-~~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A-~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~  115 (394)
                      ++||||+|+ .++.+++++||+||+++++++.++ +|+++||++|++| |+.|+.+|+++|+++|++++++|++++++|+
T Consensus         2 ~~~I~g~~~~~~~~~~~~~nP~tg~~~~~~~~~~-~dv~~Av~~A~~A~~~~W~~~~~~~Ra~~L~~~a~~l~~~~~~la   80 (513)
T cd07128           2 QSYVAGQWHAGTGDGRTLHDAVTGEVVARVSSEG-LDFAAAVAYAREKGGPALRALTFHERAAMLKALAKYLMERKEDLY   80 (513)
T ss_pred             ceeECCEEEcCCCCEEEeECCCCCCEEEEEcCCH-HHHHHHHHHHHHhhhchhhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            579999997 446789999999999999999876 8999999999998 7999999999999999999999999999999


Q ss_pred             HHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccC--------cccCCCCCC-ceeEeeecc-ceeEEEEccCCchhH
Q psy3652         116 QLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSG--------SILPSERPG-HVLLENWNP-LGVVGIISAFNFPVA  185 (394)
Q Consensus       116 ~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~--------~~~~~~~~~-~~~~~~~~P-~GVV~~I~p~N~P~~  185 (394)
                      ++ ++|+|||+.+++.|+..+++.++||++.++++.+        +..+...++ ...++.++| +|||++|+|||||+.
T Consensus        81 ~l-~~e~Gkp~~ea~~Ev~~~~~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~pwN~P~~  159 (513)
T cd07128          81 AL-SAATGATRRDSWIDIDGGIGTLFAYASLGRRELPNAHFLVEGDVEPLSKDGTFVGQHILTPRRGVAVHINAFNFPVW  159 (513)
T ss_pred             HH-HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCcccccCCCccccceEEEEecccEEEEECCcccHHH
Confidence            96 9999999999999999999999999998877542        222211112 134567999 599999999999999


Q ss_pred             hHHHHHHHHh---------------------------------------------------------------hHHHHHh
Q psy3652         186 VYGWNAAIAL---------------------------------------------------------------VGVAVQS  202 (394)
Q Consensus       186 ~~~~~~~~aL---------------------------------------------------------------~g~~i~~  202 (394)
                      +.++++++||                                                               +|+.|++
T Consensus       160 ~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~eaG~lP~gv~~~v~g~~~~~~~~l~~~d~v~fTGS~~~G~~i~~  239 (513)
T cd07128         160 GMLEKFAPALLAGVPVIVKPATATAYLTEAVVKDIVESGLLPEGALQLICGSVGDLLDHLGEQDVVAFTGSAATAAKLRA  239 (513)
T ss_pred             HHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHhCCCCCCcEEEecCChHHHhcccCCCCEEEEECCHHHHHHHHH
Confidence            9999999999                                                               7777765


Q ss_pred             ------hhhhhccccCCCCeEEEecCCC-----HHHHHHHHHHHhhCcCCCcccCCceEEEecc----------------
Q psy3652         203 ------RFGKLLLELGGNNAIIVNEDAD-----LNLAQQCLVFACCGTAGQRCTTTRRLFLHKK----------------  255 (394)
Q Consensus       203 ------~~~~~~lElgGk~p~iV~~dAD-----l~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~----------------  255 (394)
                            +++|+++|||||||+||++|||     ++.+++.+++++|.|+||.|++++|+|||++                
T Consensus       240 ~a~~a~~~~~~~lElGGknp~IV~~DAd~~~~dld~aa~~iv~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l  319 (513)
T cd07128         240 HPNIVARSIRFNAEADSLNAAILGPDATPGTPEFDLFVKEVAREMTVKAGQKCTAIRRAFVPEARVDAVIEALKARLAKV  319 (513)
T ss_pred             HhhhhccCceEEEeccCcCcEEECCCCCcchhhHHHHHHHHHHHHHHhcCCcccCCceEEEehHHHHHHHHHHHHHHHhc
Confidence                  3579999999999999999999     9999999999999999999999999999999                


Q ss_pred             -----------------------------------------cCC--------CCCceecCeEEEcCCCC--Ccccccccc
Q psy3652         256 -----------------------------------------KID--------RPGYFVEPTIVTGLPHN--SRVVHRETF  284 (394)
Q Consensus       256 -----------------------------------------~~~--------~~g~~~~Ptvl~~v~~~--~~i~~eE~F  284 (394)
                                                               ...        ..|+|++|||+.+++++  |.+++||+|
T Consensus       320 ~~G~p~~~~~~lGpli~~~~~~~i~~~i~~a~~~A~vl~GG~~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~~i~~eE~F  399 (513)
T cd07128         320 VVGDPRLEGVRMGPLVSREQREDVRAAVATLLAEAEVVFGGPDRFEVVGADAEKGAFFPPTLLLCDDPDAATAVHDVEAF  399 (513)
T ss_pred             ccCCCccCCCCcCCCCCHHHHHHHHHHHHHHHhCCEEEECCCccccccCCCCCCCEEECCEEEeccCCcccchHHhCCCc
Confidence                                                     000        14889999999988874  899999999


Q ss_pred             cceEEEEeeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHhhcccccc--eeEEEEcCCCC--------CCCCCCCccCC
Q psy3652         285 APIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSD--CGLINVNIPTN--------GAEIGGAFGGE  354 (394)
Q Consensus       285 GPvl~v~~~~~~~eAi~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~--~g~V~iN~~~~--------~~~~~~pfGG~  354 (394)
                      |||++|++|+|+||||+++|+++|||++||||+|.+++++++  .+++  +|+||||....        ...+.+||||+
T Consensus       400 GPVl~V~~~~~~deai~~aN~~~~gL~asvft~d~~~~~~~~--~~l~~~~G~v~IN~~~~~~~~~~~~~~~~~~pfGG~  477 (513)
T cd07128         400 GPVATLMPYDSLAEAIELAARGRGSLVASVVTNDPAFARELV--LGAAPYHGRLLVLNRDSAKESTGHGSPLPQLVHGGP  477 (513)
T ss_pred             CCeEEEEeeCCHHHHHHHHhcCCCCeeEEEEeCCHHHHHHHH--HHHHhhCCEEEEcCCccccccccccCCCCCCCCCCc
Confidence            999999999999999999999999999999999999999999  7786  99999997531        22456899999


Q ss_pred             CCCCCCCCc-hHHHHHhhhheeEEE
Q psy3652         355 KYTGGGRES-GSDSWKQYCRRSTVT  378 (394)
Q Consensus       355 ~~SG~G~~~-g~~~l~~f~~~k~v~  378 (394)
                      |.||+|++. |.+++++|++.|++.
T Consensus       478 k~SG~G~~~gg~~~l~~~~~~k~v~  502 (513)
T cd07128         478 GRAGGGEELGGLRGVKHYMQRTAVQ  502 (513)
T ss_pred             ccCCCCcccccHHHHHHhheeeeee
Confidence            999999995 799999999999873

The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH.

>cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like

Probab=100.00  E-value=2.9e-70  Score=555.96  Aligned_cols=331  Identities=29%  Similarity=0.474  Sum_probs=303.6

Q ss_pred             ceeCCeecc--CCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHH
Q psy3652          39 VYDGTSWKA--NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQ  116 (394)
Q Consensus        39 ~~i~G~~~~--~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~  116 (394)
                      +||||+|+.  ++.+++++||.||+++++++.++.+|+++++++|++||+.|+++|.++|.++|++++++|++++++|++
T Consensus         1 ~~i~g~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~   80 (466)
T cd07138           1 FYIDGAWVAPAGTETIDVINPATEEVIGTVPLGTAADVDRAVAAARRAFPAWSATSVEERAALLERIAEAYEARADELAQ   80 (466)
T ss_pred             CeECCEeecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHH
Confidence            589999973  457899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHcCCChHHhH-HHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh
Q psy3652         117 LVSLEMGKILAEGI-GEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL  195 (394)
Q Consensus       117 ~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL  195 (394)
                      ++++|+|||..+++ .|+..+++.++++++.++.+.+...     ....+..++|+|||++|+|||||+.++++++++||
T Consensus        81 ~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~AL  155 (466)
T cd07138          81 AITLEMGAPITLARAAQVGLGIGHLRAAADALKDFEFEER-----RGNSLVVREPIGVCGLITPWNWPLNQIVLKVAPAL  155 (466)
T ss_pred             HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccccc-----CceEEEEEeecceEEEECCCccHHHHHHHHHHHHH
Confidence            99999999999986 5999999999999988877644321     12356789999999999999999999999999999


Q ss_pred             -----------------------------------------------------------------hHHHHHh----hhhh
Q psy3652         196 -----------------------------------------------------------------VGVAVQS----RFGK  206 (394)
Q Consensus       196 -----------------------------------------------------------------~g~~i~~----~~~~  206 (394)
                                                                                       +|+.|++    +++|
T Consensus       156 aaGN~Vv~Kps~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~  235 (466)
T cd07138         156 AAGCTVVLKPSEVAPLSAIILAEILDEAGLPAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGSTRAGKRVAEAAADTVKR  235 (466)
T ss_pred             hcCCEEEEECCCcCcHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCCe
Confidence                                                                             6676665    4678


Q ss_pred             hccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc-------------------------------
Q psy3652         207 LLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK-------------------------------  255 (394)
Q Consensus       207 ~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~-------------------------------  255 (394)
                      +++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++                               
T Consensus       236 v~lElgG~~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpl  315 (466)
T cd07138         236 VALELGGKSANIILDDADLEKAVPRGVAACFANSGQSCNAPTRMLVPRSRYAEAEEIAAAAAEAYVVGDPRDPATTLGPL  315 (466)
T ss_pred             EEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCCCcCCcc
Confidence            9999999999999999999999999999999999999999999999999                               


Q ss_pred             ---------------------------cCC----CCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHh
Q psy3652         256 ---------------------------KID----RPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNN  304 (394)
Q Consensus       256 ---------------------------~~~----~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n  304 (394)
                                                 ...    ..|+|+.|||+.+++++|++++||+||||++|++|+|.||||+++|
T Consensus       316 i~~~~~~~~~~~v~~a~~~Ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n  395 (466)
T cd07138         316 ASAAQFDRVQGYIQKGIEEGARLVAGGPGRPEGLERGYFVKPTVFADVTPDMTIAREEIFGPVLSIIPYDDEDEAIAIAN  395 (466)
T ss_pred             CCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCcCCCCceECCEEecCCCCCChHHhCCCCCceEEEeccCCHHHHHHHHh
Confidence                                       001    1488999999999999999999999999999999999999999999


Q ss_pred             cCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEE
Q psy3652         305 EVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVT  378 (394)
Q Consensus       305 ~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~  378 (394)
                      +++|||+++|||+|.+.+++++  .++++|+|+||...  ..+.+||||+|.||+|+++|.+++++|++.|+++
T Consensus       396 ~~~~gL~a~i~t~d~~~a~~~~--~~l~~G~v~iN~~~--~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~v~  465 (466)
T cd07138         396 DTPYGLAGYVWSADPERARAVA--RRLRAGQVHINGAA--FNPGAPFGGYKQSGNGREWGRYGLEEFLEVKSIQ  465 (466)
T ss_pred             CCCCCceEEEEcCCHHHHHHHH--HhcCcceEEECCCC--CCCCCCcCCcccccCCccchHHHHHHhcceeEEe
Confidence            9999999999999999999999  88999999999852  4567899999999999999999999999999874

The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD.

>cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like

Probab=100.00  E-value=2.8e-70  Score=554.44  Aligned_cols=326  Identities=32%  Similarity=0.500  Sum_probs=300.5

Q ss_pred             eeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCChHHhHH
Q psy3652          52 IPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIG  131 (394)
Q Consensus        52 ~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~  131 (394)
                      ++++||+||+++++++.++.+++++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||+.++..
T Consensus         1 ~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~   80 (451)
T cd07150           1 FDDLNPADGSVYARVAVGSRQDAERAIAAAYDAFPAWAATTPSERERILLKAAEIMERRADDLIDLLIDEGGSTYGKAWF   80 (451)
T ss_pred             CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHH
Confidence            46789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh----------------
Q psy3652         132 EVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL----------------  195 (394)
Q Consensus       132 ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL----------------  195 (394)
                      |+..+++.+++++..++++.+...+...++...+.+++|+|||++|+|||||+.+.++++++||                
T Consensus        81 ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~  160 (451)
T cd07150          81 ETTFTPELLRAAAGECRRVRGETLPSDSPGTVSMSVRRPLGVVAGITPFNYPLILATKKVAFALAAGNTVVLKPSEETPV  160 (451)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecccEEEEECCCccHHHHHHHHHHHHHhcCCeEEEECCccCcH
Confidence            9999999999999988877665544333445567889999999999999999999999999998                


Q ss_pred             -------------------------------------------------hHHHHHh----hhhhhccccCCCCeEEEecC
Q psy3652         196 -------------------------------------------------VGVAVQS----RFGKLLLELGGNNAIIVNED  222 (394)
Q Consensus       196 -------------------------------------------------~g~~i~~----~~~~~~lElgGk~p~iV~~d  222 (394)
                                                                       +|+.|++    +++|+++|+|||||+||++|
T Consensus       161 t~~~l~~~~~~ag~P~g~v~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~lelGG~~~~iV~~d  240 (451)
T cd07150         161 IGLKIAEIMEEAGLPKGVFNVVTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAGRHLKKITLELGGKNPLIVLAD  240 (451)
T ss_pred             HHHHHHHHHHHhCCCcCcEEEeeCCCcHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCceEeecCCCCeeEECCC
Confidence                                                             6666654    56799999999999999999


Q ss_pred             CCHHHHHHHHHHHhhCcCCCcccCCceEEEecc-----------------------------------------------
Q psy3652         223 ADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK-----------------------------------------------  255 (394)
Q Consensus       223 ADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~-----------------------------------------------  255 (394)
                      ||++.|++.+++++|.|+||.|++++|||||++                                               
T Consensus       241 adl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a  320 (451)
T cd07150         241 ADLDYAVRAAAFGAFMHQGQICMSASRIIVEEPVYDEFVKKFVARASKLKVGDPRDPDTVIGPLISPRQVERIKRQVEDA  320 (451)
T ss_pred             CChHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999                                               


Q ss_pred             ------c---CCCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHhh
Q psy3652         256 ------K---IDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWL  326 (394)
Q Consensus       256 ------~---~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~~gLsa~v~t~d~~~a~~~~  326 (394)
                            .   ...+|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++++++
T Consensus       321 ~~~Ga~vl~gg~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~~~~~~~~  400 (451)
T cd07150         321 VAKGAKLLTGGKYDGNFYQPTVLTDVTPDMRIFREETFGPVTSVIPAKDAEEALELANDTEYGLSAAILTNDLQRAFKLA  400 (451)
T ss_pred             HhCCCEEEeCCccCCcEEcCEEEeCCCCCCHHHhCCCcCceEEEEEeCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHH
Confidence                  0   0124789999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEE
Q psy3652         327 GPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTI  379 (394)
Q Consensus       327 ~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~  379 (394)
                        .++++|.|+||+++....+.+||||+|.||+|+++|.+++++|++.|++++
T Consensus       401 --~~l~~G~v~iN~~~~~~~~~~pfgG~~~SG~G~~~g~~~l~~~~~~k~v~~  451 (451)
T cd07150         401 --ERLESGMVHINDPTILDEAHVPFGGVKASGFGREGGEWSMEEFTELKWITV  451 (451)
T ss_pred             --HhcCcCEEEECCCCCCCCCCCCcCCccccccCcCCcHHHHHHhheeeEEeC
Confidence              889999999998765555678999999999999999999999999998863

Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde.

>cd07107 ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like

Probab=100.00  E-value=5.2e-70  Score=552.75  Aligned_cols=323  Identities=29%  Similarity=0.496  Sum_probs=298.1

Q ss_pred             eecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCChHHhHHHH
Q psy3652          54 SINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEV  133 (394)
Q Consensus        54 v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev  133 (394)
                      ++||+||+++++++.++.+|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..++..|+
T Consensus         1 ~~~p~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ev   80 (456)
T cd07107           1 VINPATGQVLARVPAASAADVDRAVAAARAAFPEWRATTPLERARMLRELATRLREHAEELALIDALDCGNPVSAMLGDV   80 (456)
T ss_pred             CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHHHH
Confidence            47999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh------------------
Q psy3652         134 QEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL------------------  195 (394)
Q Consensus       134 ~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL------------------  195 (394)
                      ..+++.++++++....+.+...+.. .+...++.++|+|||++|+|||||+.+.++++++||                  
T Consensus        81 ~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~  159 (456)
T cd07107          81 MVAAALLDYFAGLVTELKGETIPVG-GRNLHYTLREPYGVVARIVAFNHPLMFAAAKIAAPLAAGNTVVVKPPEQAPLSA  159 (456)
T ss_pred             HHHHHHHHHHHHHHHHhCCccccCC-CCceEEEEEecceEEEEECCcccHHHHHHHHHhHHHHcCCEEEEeCCCCChHHH
Confidence            9999999999988877766544432 244567889999999999999999999999999999                  


Q ss_pred             ----------------------------------------------hHHHHHh----hhhhhccccCCCCeEEEecCCCH
Q psy3652         196 ----------------------------------------------VGVAVQS----RFGKLLLELGGNNAIIVNEDADL  225 (394)
Q Consensus       196 ----------------------------------------------~g~~i~~----~~~~~~lElgGk~p~iV~~dADl  225 (394)
                                                                    +|+.|++    +++|+++|||||||+||++|||+
T Consensus       160 ~~l~~~~~~~lP~gvv~~v~g~~~~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~~~~~~~lElgG~~p~iV~~dadl  239 (456)
T cd07107         160 LRLAELAREVLPPGVFNILPGDGATAGAALVRHPDVKRIALIGSVPTGRAIMRAAAEGIKHVTLELGGKNALIVFPDADP  239 (456)
T ss_pred             HHHHHHHHHhCCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhcCCCeEEEECCCCCeEEECCCCCH
Confidence                                                          6777765    45799999999999999999999


Q ss_pred             HHHHHHHHHHh-hCcCCCcccCCceEEEecc-------------------------------------------------
Q psy3652         226 NLAQQCLVFAC-CGTAGQRCTTTRRLFLHKK-------------------------------------------------  255 (394)
Q Consensus       226 ~~aa~~i~~~~-~~~~GQ~C~a~~rv~V~~~-------------------------------------------------  255 (394)
                      +.|++.+++++ |.|+||.|++++|||||++                                                 
T Consensus       240 ~~Aa~~i~~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~  319 (456)
T cd07107         240 EAAADAAVAGMNFTWCGQSCGSTSRLFVHESIYDEVLARVVERVAAIKVGDPTDPATTMGPLVSRQQYDRVMHYIDSAKR  319 (456)
T ss_pred             HHHHHHHHHhchhhcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCcccCHHHHHHHHHHHHHHHH
Confidence            99999999995 9999999999999999999                                                 


Q ss_pred             ----c-----C-----CCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcCCCCcEEEEEcCCHHH
Q psy3652         256 ----K-----I-----DRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTN  321 (394)
Q Consensus       256 ----~-----~-----~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~~gLsa~v~t~d~~~  321 (394)
                          .     .     ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++
T Consensus       320 ~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~  399 (456)
T cd07107         320 EGARLVTGGGRPEGPALEGGFYVEPTVFADVTPGMRIAREEIFGPVLSVLRWRDEAEMVAQANGVEYGLTAAIWTNDISQ  399 (456)
T ss_pred             CCCEEEeCCCccccccCCCCceECCEEEECCCCCChhhhCCCCCceEEEEeeCCHHHHHHHHhCCCCcceEEEECCCHHH
Confidence                0     0     0238899999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEEe
Q psy3652         322 LFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTIN  380 (394)
Q Consensus       322 a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~~  380 (394)
                      +++++  .++++|.|+||.++. ..+.+||||+|.||+|+++|++++++|++.|+++++
T Consensus       400 ~~~~~--~~l~~G~v~iN~~~~-~~~~~pfgG~k~SG~G~~~g~~~~~~~~~~k~v~~~  455 (456)
T cd07107         400 AHRTA--RRVEAGYVWINGSSR-HFLGAPFGGVKNSGIGREECLEELLSYTQEKNVNVR  455 (456)
T ss_pred             HHHHH--HhcCcCEEEECCCCC-CCCCCCcCCcccccCCcCchHHHHHHhhceEEEEEe
Confidence            99999  889999999998653 456799999999999999999999999999999875

Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD.

>cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA

Probab=100.00  E-value=1.2e-69  Score=556.79  Aligned_cols=343  Identities=30%  Similarity=0.433  Sum_probs=309.9

Q ss_pred             CCCceeCCeeccCCCeeeeecCCC-CCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHH
Q psy3652          36 NPGVYDGTSWKANGEIIPSINPST-GETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPL  114 (394)
Q Consensus        36 ~~~~~i~G~~~~~~~~~~v~nP~t-g~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l  114 (394)
                      ....||+|+|..++.+++++||+| |+++++++.++.+|+++|+++|++||+.|+.++.++|.++|++++++|++++++|
T Consensus        32 ~~~p~i~g~~~~~~~~~~v~~P~t~g~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l  111 (518)
T cd07125          32 EAIPIINGEETETGEGAPVIDPADHERTIGEVSLADAEDVDAALAIAAAAFAGWSATPVEERAEILEKAADLLEANRGEL  111 (518)
T ss_pred             ccCceECCEEeeCCCeEEEECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHH
Confidence            345689999986788999999999 9999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHH
Q psy3652         115 GQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIA  194 (394)
Q Consensus       115 ~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~a  194 (394)
                      ++++++|+|||+.+++.|+..+++.++++++.++++.+........+...+.+++|+|||++|+|||||+.+.++++++|
T Consensus       112 a~~~~~e~Gk~~~~a~~ev~~~i~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~P~GVV~~I~p~N~P~~~~~~~i~~A  191 (518)
T cd07125         112 IALAAAEAGKTLADADAEVREAIDFCRYYAAQARELFSDPELPGPTGELNGLELHGRGVFVCISPWNFPLAIFTGQIAAA  191 (518)
T ss_pred             HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCceeEEEEecccEEEEECCcchHHHHHHHHHHHH
Confidence            99999999999999999999999999999998877654321111123445778999999999999999999999999999


Q ss_pred             h-----------------------------------------------------------------hHHHHHhh------
Q psy3652         195 L-----------------------------------------------------------------VGVAVQSR------  203 (394)
Q Consensus       195 L-----------------------------------------------------------------~g~~i~~~------  203 (394)
                      |                                                                 +|+.|++.      
T Consensus       192 LaaGN~VVlKps~~tp~~~~~l~~ll~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~  271 (518)
T cd07125         192 LAAGNTVIAKPAEQTPLIAARAVELLHEAGVPRDVLQLVPGDGEEIGEALVAHPRIDGVIFTGSTETAKLINRALAERDG  271 (518)
T ss_pred             HHcCCEEEEeCCCcCcHHHHHHHHHHHHcCCCCCcEEEEecCchhhHHHHhcCCCcCEEEEECCHHHHHHHHHHhhhccC
Confidence            9                                                                 67777653      


Q ss_pred             -hhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc---------------------------
Q psy3652         204 -FGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK---------------------------  255 (394)
Q Consensus       204 -~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~---------------------------  255 (394)
                       ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++                           
T Consensus       272 ~~~~v~lElgGk~p~iV~~dADl~~Aa~~iv~g~f~nsGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~  351 (518)
T cd07125         272 PILPLIAETGGKNAMIVDSTALPEQAVKDVVQSAFGSAGQRCSALRLLYLQEEIAERFIEMLKGAMASLKVGDPWDLSTD  351 (518)
T ss_pred             CCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcchhHHHHHHHHHHHHhcCCccCCCCCCCC
Confidence             5689999999999999999999999999999999999999999999999999                           


Q ss_pred             -------------------------c-----CCC-CCceecCeEEEcCCCCCcccccccccceEEEEeeC--CHHHHHHH
Q psy3652         256 -------------------------K-----IDR-PGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFD--SLDEAITW  302 (394)
Q Consensus       256 -------------------------~-----~~~-~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~--~~~eAi~~  302 (394)
                                               .     .+. .|+|+.|||+.++  +|++++||+||||++|++|+  |+||||++
T Consensus       352 ~gpli~~~~~~~v~~~i~~a~~~~~vl~gg~~~~~~g~~~~Ptvl~~v--~~~i~~eE~FgPVl~v~~~~~~~~deAi~~  429 (518)
T cd07125         352 VGPLIDKPAGKLLRAHTELMRGEAWLIAPAPLDDGNGYFVAPGIIEIV--GIFDLTTEVFGPILHVIRFKAEDLDEAIED  429 (518)
T ss_pred             cCCCcCHHHHHHHHHHHHHHHhCCEEEeCCCcCCCCCeEEccEEEeec--CChHhhCcccCCeEEEEEeCCCCHHHHHHH
Confidence                                     0     001 4899999999887  89999999999999999999  99999999


Q ss_pred             HhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCC-CCCCCCccCCCCCCCCC-CchHHHHHhhhheeEEEEe
Q psy3652         303 NNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNG-AEIGGAFGGEKYTGGGR-ESGSDSWKQYCRRSTVTIN  380 (394)
Q Consensus       303 ~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~-~~~~~pfGG~~~SG~G~-~~g~~~l~~f~~~k~v~~~  380 (394)
                      +|+++|||++||||+|.+.+++++  .++++|.|+||.++.. ..+.+||||+|.||+|+ .+|.+++++|++.|+++++
T Consensus       430 ~n~~~~gLta~Vft~d~~~~~~~~--~~l~~G~V~IN~~~~~~~~~~~PfGG~~~SG~G~~~gg~~~~~~ft~~k~i~~~  507 (518)
T cd07125         430 INATGYGLTLGIHSRDEREIEYWR--ERVEAGNLYINRNITGAIVGRQPFGGWGLSGTGPKAGGPNYLLRFGNEKTVSLN  507 (518)
T ss_pred             HhCCCCCceEEEEeCCHHHHHHHH--HhCCcCeEEECCCCCCCCCCCCCCCCcccccCCcccccHHHHHHhcceEEEEEE
Confidence            999999999999999999999999  8899999999986543 33568999999999995 6789999999999999987


Q ss_pred             cC
Q psy3652         381 HG  382 (394)
Q Consensus       381 ~~  382 (394)
                      +.
T Consensus       508 ~~  509 (518)
T cd07125         508 TT  509 (518)
T ss_pred             cc
Confidence            63

The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes.

>cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like

Probab=100.00  E-value=4.8e-70  Score=553.16  Aligned_cols=326  Identities=28%  Similarity=0.432  Sum_probs=297.8

Q ss_pred             eeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCChHHhHH
Q psy3652          52 IPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIG  131 (394)
Q Consensus        52 ~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~  131 (394)
                      ++++||+||+++++++.++.+|+++++++|++||+.|+.+|.++|.++|++++++|++++++|++++++|+|||..+++.
T Consensus         1 ~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~   80 (456)
T cd07145           1 IEVRNPANGEVIDTVPSLSREEVREAIEVAEKAKDVMSNLPAYKRYKILMKVAELIERRKEELAKLLTIEVGKPIKQSRV   80 (456)
T ss_pred             CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHH
Confidence            46889999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhhhhccCcccCCCC----CCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh------------
Q psy3652         132 EVQEFIDICDYAVGLSRTYSGSILPSER----PGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL------------  195 (394)
Q Consensus       132 ev~~~~~~l~~~a~~~~~~~~~~~~~~~----~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL------------  195 (394)
                      |+..+++.++++++.++.+.+...+...    .+...++.++|+|||++|+|||||+.+.++++++||            
T Consensus        81 ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~  160 (456)
T cd07145          81 EVERTIRLFKLAAEEAKVLRGETIPVDAYEYNERRIAFTVREPIGVVGAITPFNFPANLFAHKIAPAIAVGNSVVVKPSS  160 (456)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCccccCccccccCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCc
Confidence            9999999999999887766655433211    134466789999999999999999999999999999            


Q ss_pred             -----------------------------------------------------hHHHHHh----hhhhhccccCCCCeEE
Q psy3652         196 -----------------------------------------------------VGVAVQS----RFGKLLLELGGNNAII  218 (394)
Q Consensus       196 -----------------------------------------------------~g~~i~~----~~~~~~lElgGk~p~i  218 (394)
                                                                           +|+.+++    +++|+++|+|||||+|
T Consensus       161 ~~p~~~~~l~~~~~~ag~p~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~v~lElgG~n~~i  240 (456)
T cd07145         161 NTPLTAIELAKILEEAGLPPGVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVGLLIASKAGGTGKKVALELGGSDPMI  240 (456)
T ss_pred             cchHHHHHHHHHHHHcCCCcccEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCceEEecCCCCeeE
Confidence                                                                 6676664    4679999999999999


Q ss_pred             EecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc-------------------------------------------
Q psy3652         219 VNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK-------------------------------------------  255 (394)
Q Consensus       219 V~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~-------------------------------------------  255 (394)
                      |++|||++.|++.+++++|.|+||.|++++|||||++                                           
T Consensus       241 V~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~  320 (456)
T cd07145         241 VLKDADLERAVSIAVRGRFENAGQVCNAVKRILVEEEVYDKFLKLLVEKVKKLKVGDPLDESTDLGPLISPEAVERMENL  320 (456)
T ss_pred             ECCCCCHHHHHHHHHHHHHhccCCCCccCeeEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCcCHHHHHHHHHH
Confidence            9999999999999999999999999999999999999                                           


Q ss_pred             ----------c-C---CCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcCCCCcEEEEEcCCHHH
Q psy3652         256 ----------K-I---DRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTN  321 (394)
Q Consensus       256 ----------~-~---~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~~gLsa~v~t~d~~~  321 (394)
                                . .   ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++
T Consensus       321 i~~a~~~ga~vl~gg~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~  400 (456)
T cd07145         321 VNDAVEKGGKILYGGKRDEGSFFPPTVLENDTPDMIVMKEEVFGPVLPIAKVKDDEEAVEIANSTEYGLQASVFTNDINR  400 (456)
T ss_pred             HHHHHHCCCEEEeCCCCCCCeEECCEeecCCCCCChHhhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHH
Confidence                      0 0   0127899999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEE
Q psy3652         322 LFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTI  379 (394)
Q Consensus       322 a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~  379 (394)
                      +.+++  .++++|+|+||+.+......+||||+|.||+|+++|++++++|++.|++.+
T Consensus       401 ~~~~~--~~~~~g~v~vN~~~~~~~~~~pfgG~~~SG~G~~~g~~~l~~f~~~k~v~~  456 (456)
T cd07145         401 ALKVA--RELEAGGVVINDSTRFRWDNLPFGGFKKSGIGREGVRYTMLEMTEEKTIVI  456 (456)
T ss_pred             HHHHH--HhCCcceEEECCCCCCCCCCCCCCCcccccCCcCchHHHHHHhhceeEEeC
Confidence            99999  889999999998654444578999999999999999999999999999853

NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD.

>cd07111 ALDH_F16 Aldehyde dehydrogenase family 16A1-like

Probab=100.00  E-value=5.2e-70  Score=553.96  Aligned_cols=329  Identities=30%  Similarity=0.509  Sum_probs=302.0

Q ss_pred             CCCCCceeCCeecc--CCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCH
Q psy3652          34 SVNPGVYDGTSWKA--NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKL  111 (394)
Q Consensus        34 ~~~~~~~i~G~~~~--~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~  111 (394)
                      .++.++||||+|+.  ++.+++++||+||+++++++.++.+|+++++++|++||+.|+.+|.++|.++|++++++|++++
T Consensus        19 ~~~~~~~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~a~~~~v~~ai~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~   98 (480)
T cd07111          19 DRSFGHFINGKWVKPENRKSFPTINPATGEVLASVLQAEEEDVDAAVAAARTAFESWSALPGHVRARHLYRIARHIQKHQ   98 (480)
T ss_pred             cccccceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhH
Confidence            55678899999973  4678999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHcCCChHHhH-HHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHH
Q psy3652         112 VPLGQLVSLEMGKILAEGI-GEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWN  190 (394)
Q Consensus       112 ~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~  190 (394)
                      ++|++++++|+|||..+++ .|+..+++.+++++++.+...+           .+..++|+|||++|+|||||+.+.+++
T Consensus        99 ~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~-----------~~~~~~P~GVV~~I~PwN~P~~~~~~~  167 (480)
T cd07111          99 RLFAVLESLDNGKPIRESRDCDIPLVARHFYHHAGWAQLLDT-----------ELAGWKPVGVVGQIVPWNFPLLMLAWK  167 (480)
T ss_pred             HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----------CcccceecceEEEECCCccHHHHHHHH
Confidence            9999999999999999997 4999999999998877765321           134579999999999999999999999


Q ss_pred             HHHHh----------------------------------------------------------------hHHHHHh----
Q psy3652         191 AAIAL----------------------------------------------------------------VGVAVQS----  202 (394)
Q Consensus       191 ~~~aL----------------------------------------------------------------~g~~i~~----  202 (394)
                      +++||                                                                +|+.|++    
T Consensus       168 i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~l~~~~~v~~v~ftGs~~~g~~v~~~aa~  247 (480)
T cd07111         168 ICPALAMGNTVVLKPAEYTPLTALLFAEICAEAGLPPGVLNIVTGNGSFGSALANHPGVDKVAFTGSTEVGRALRRATAG  247 (480)
T ss_pred             HHHHHHcCCEEEEECCCCChHHHHHHHHHHHhcCCCcccEEEEeCCchHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhc
Confidence            99999                                                                6777765    


Q ss_pred             hhhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc---------------------------
Q psy3652         203 RFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK---------------------------  255 (394)
Q Consensus       203 ~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~---------------------------  255 (394)
                      .++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++                           
T Consensus       248 ~~~~~~lElGGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~  327 (480)
T cd07111         248 TGKKLSLELGGKSPFIVFDDADLDSAVEGIVDAIWFNQGQVCCAGSRLLVQESVAEELIRKLKERMSHLRVGDPLDKAID  327 (480)
T ss_pred             cCCcEEEEcCCCceEEECCCCCHHHHHHHHHHHHHhcCCCcCcCCceEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCc
Confidence            45799999999999999999999999999999999999999999999999999                           


Q ss_pred             --------------------------c------CCCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHH
Q psy3652         256 --------------------------K------IDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWN  303 (394)
Q Consensus       256 --------------------------~------~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~  303 (394)
                                                .      .+..|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++
T Consensus       328 ~gpli~~~~~~~v~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~deai~~~  407 (480)
T cd07111         328 MGAIVDPAQLKRIRELVEEGRAEGADVFQPGADLPSKGPFYPPTLFTNVPPASRIAQEEIFGPVLVVLTFRTAKEAVALA  407 (480)
T ss_pred             cccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhcCCCCCCeeEeecCCCHHHHHHHH
Confidence                                      0      01247899999999999999999999999999999999999999999


Q ss_pred             hcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeE
Q psy3652         304 NEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRST  376 (394)
Q Consensus       304 n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~  376 (394)
                      |+++|||+++|||+|.+.+.+++  .++++|.|+||+... ..+.+||||+|.||+|+++|.+++++|++.|+
T Consensus       408 n~~~~gL~~~i~t~d~~~~~~~~--~~l~aG~v~iN~~~~-~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~  477 (480)
T cd07111         408 NNTPYGLAASVWSENLSLALEVA--LSLKAGVVWINGHNL-FDAAAGFGGYRESGFGREGGKEGLYEYLRPSW  477 (480)
T ss_pred             hCCCCCceEEEEcCCHHHHHHHH--HhCCEeeEEECCCCC-CCCCCCcCCcccccCCccchHHHHHHHhhccC
Confidence            99999999999999999999999  889999999998643 45678999999999999999999999999885

Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence.

>cd07082 ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11

Probab=100.00  E-value=1.2e-69  Score=552.64  Aligned_cols=342  Identities=29%  Similarity=0.450  Sum_probs=311.7

Q ss_pred             CCceeCCeecc-CCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcC-ChhhHHHHHHHHHHHHhhCHHHH
Q psy3652          37 PGVYDGTSWKA-NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAAL-PAPRRGEIVRQIGDALRHKLVPL  114 (394)
Q Consensus        37 ~~~~i~G~~~~-~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~-~~~~R~~~L~~~a~~l~~~~~~l  114 (394)
                      .++||||+|+. .+.+++++||+||+++++++.++.+|+++|+++|++||+.|+.+ |.++|.++|++++++|++++++|
T Consensus         2 ~~~~i~g~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~~R~~~L~~~a~~l~~~~~el   81 (473)
T cd07082           2 FKYLINGEWKESSGKTIEVYSPIDGEVIGSVPALSALEILEAAETAYDAGRGWWPTMPLEERIDCLHKFADLLKENKEEV   81 (473)
T ss_pred             CCceECCEEecCCCCeEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            35799999974 35889999999999999999999999999999999999999988 99999999999999999999999


Q ss_pred             HHHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCcccCCCC----CCceeEeeeccceeEEEEccCCchhHhHHHH
Q psy3652         115 GQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSER----PGHVLLENWNPLGVVGIISAFNFPVAVYGWN  190 (394)
Q Consensus       115 ~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~----~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~  190 (394)
                      ++++++|+|||..++..|+..+++.++++++.++.+.+...+...    .+...+..++|+|||++|+|||||+.+.+++
T Consensus        82 ~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~  161 (473)
T cd07082          82 ANLLMWEIGKTLKDALKEVDRTIDYIRDTIEELKRLDGDSLPGDWFPGTKGKIAQVRREPLGVVLAIGPFNYPLNLTVSK  161 (473)
T ss_pred             HHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccccCCCceeEEEEecceEEEEECCcCcHHHHHHHH
Confidence            999999999999999899999999999999988877655433211    2445678899999999999999999999999


Q ss_pred             HHHHh-----------------------------------------------------------------hHHHHHhh--
Q psy3652         191 AAIAL-----------------------------------------------------------------VGVAVQSR--  203 (394)
Q Consensus       191 ~~~aL-----------------------------------------------------------------~g~~i~~~--  203 (394)
                      +++||                                                                 +|+.|++.  
T Consensus       162 i~~AL~aGN~vilKps~~~~~~~~~l~~~l~~aglp~~~~~vv~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a~  241 (473)
T cd07082         162 LIPALIMGNTVVFKPATQGVLLGIPLAEAFHDAGFPKGVVNVVTGRGREIGDPLVTHGRIDVISFTGSTEVGNRLKKQHP  241 (473)
T ss_pred             HHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhC
Confidence            99998                                                                 67777765  


Q ss_pred             hhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc----------------------------
Q psy3652         204 FGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK----------------------------  255 (394)
Q Consensus       204 ~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~----------------------------  255 (394)
                      ++|+++|+|||||+||++|||++.|++.+++++|.++||.|++++|||||++                            
T Consensus       242 ~~~~~lelgg~n~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~  321 (473)
T cd07082         242 MKRLVLELGGKDPAIVLPDADLELAAKEIVKGALSYSGQRCTAIKRVLVHESVADELVELLKEEVAKLKVGMPWDNGVDI  321 (473)
T ss_pred             CCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHHhCCCcCCCCeEEEEcHHHHHHHHHHHHHHHhcCCCCCCCCCCCCc
Confidence            5799999999999999999999999999999999999999999999999999                            


Q ss_pred             -------------------------c-C---CCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcC
Q psy3652         256 -------------------------K-I---DRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEV  306 (394)
Q Consensus       256 -------------------------~-~---~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~  306 (394)
                                               . .   ...|+|+.|||+.+++++|++++||+||||++|++|+|++|||+++|++
T Consensus       322 gp~i~~~~~~~~~~~~~~a~~~ga~~~~gg~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~  401 (473)
T cd07082         322 TPLIDPKSADFVEGLIDDAVAKGATVLNGGGREGGNLIYPTLLDPVTPDMRLAWEEPFGPVLPIIRVNDIEEAIELANKS  401 (473)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCeEEeeEEEecCCCCCHHHhCcCcCceEEEEEeCCHHHHHHHHhCC
Confidence                                     0 0   0127899999999999999999999999999999999999999999999


Q ss_pred             CCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEEe
Q psy3652         307 KQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTIN  380 (394)
Q Consensus       307 ~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~~  380 (394)
                      +|||+++|||+|.+.+.+++  .++++|+|+||.++......+||||+|.||+|+++|.+++++|++.|+++++
T Consensus       402 ~~gL~~~v~t~d~~~~~~~~--~~l~~G~v~iN~~~~~~~~~~pfGG~k~SG~g~~~g~~~l~~~~~~k~i~~~  473 (473)
T cd07082         402 NYGLQASIFTKDINKARKLA--DALEVGTVNINSKCQRGPDHFPFLGRKDSGIGTQGIGDALRSMTRRKGIVIN  473 (473)
T ss_pred             CCCceEEEEeCCHHHHHHHH--HhCCcceEEECCCCCCCCCCCCCCcccccccCCCChHHHHHHhhceeEEEEC
Confidence            99999999999999999999  8899999999987544445689999999999999999999999999999763

NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants.

>TIGR01780 SSADH succinate-semialdehyde dehydrogenase

Probab=100.00  E-value=4.1e-70  Score=552.08  Aligned_cols=319  Identities=29%  Similarity=0.501  Sum_probs=293.9

Q ss_pred             eecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCChHHhHHHH
Q psy3652          54 SINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEV  133 (394)
Q Consensus        54 v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev  133 (394)
                      ++||+||+++++++.++.++++.++++|++||+.|+.+|.++|.++|++++++|++++++|++++++|+|||..+++.|+
T Consensus         1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev   80 (448)
T TIGR01780         1 VYNPATGEIIGTVPDQGVEEAEAAIRAAYEAFKTWKNTTAKERSSLLRKWYNLMMENKDDLARLITLENGKPLKEAKGEI   80 (448)
T ss_pred             CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHH
Confidence            46999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh------------------
Q psy3652         134 QEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL------------------  195 (394)
Q Consensus       134 ~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL------------------  195 (394)
                      ..+++.++|++...+++.+...+....+...+..++|+|||++|+|||||+.+.++++++||                  
T Consensus        81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~  160 (448)
T TIGR01780        81 LYAASFLEWFAEEAKRVYGDTIPSPQSDKRLLVIKQPVGVCAAITPWNFPAAMITRKAGAALAAGCTVVVKPAEQTPLSA  160 (448)
T ss_pred             HHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEeeeeEEEEEcCCChHHHHHHHHHHHHHHcCCeEeeECCccchHHH
Confidence            99999999999887777665444333344556789999999999999999999999999999                  


Q ss_pred             ------------------------------------------------hHHHHHh----hhhhhccccCCCCeEEEecCC
Q psy3652         196 ------------------------------------------------VGVAVQS----RFGKLLLELGGNNAIIVNEDA  223 (394)
Q Consensus       196 ------------------------------------------------~g~~i~~----~~~~~~lElgGk~p~iV~~dA  223 (394)
                                                                      +|+.|++    .++|+++|||||||+||++||
T Consensus       161 ~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~aa~~~~~~~lElGGk~~~iV~~da  240 (448)
T TIGR01780       161 LALARLAEQAGIPKGVLNVITGSRAKEVGKVLCTSPLVRKISFTGSTNVGKILMKQSASTVKKVSMELGGNAPFIVFDDA  240 (448)
T ss_pred             HHHHHHHHHcCCCccceEEEeCCCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCceEeecCCCCeeEECCCC
Confidence                                                            6677665    467999999999999999999


Q ss_pred             CHHHHHHHHHHHhhCcCCCcccCCceEEEecc------------------------------------------------
Q psy3652         224 DLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK------------------------------------------------  255 (394)
Q Consensus       224 Dl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~------------------------------------------------  255 (394)
                      |++.|++.+++++|.|+||.|++++|||||++                                                
T Consensus       241 dl~~aa~~iv~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~  320 (448)
T TIGR01780       241 DIDQAVEGAMASKFRNAGQTCVCANRLYVHDGIYDEFAKKLAEAVKKLKVGNGLDEGVTQGPLINEKAVEKVEKHIADAV  320 (448)
T ss_pred             CHHHHHHHHHHHHHHhcCCcccCCceeechHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999                                                


Q ss_pred             ------c----C-CCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHH
Q psy3652         256 ------K----I-DRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFK  324 (394)
Q Consensus       256 ------~----~-~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~~gLsa~v~t~d~~~a~~  324 (394)
                            .    . +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++
T Consensus       321 ~~Ga~il~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~~~vfs~d~~~~~~  400 (448)
T TIGR01780       321 EKGAKVVTGGKRHELGGNFFEPTVLSNVTQDMLVAKEETFGPLAPVFKFDDEEEVIAIANDTEVGLAAYFFSRDLATIWR  400 (448)
T ss_pred             HCCCEEEeCCCcCCCCCeeEcCEEEecCCCCChHhhCCCCCceEEEEEECCHHHHHHHHhCCCcCceEEEECCCHHHHHH
Confidence                  0    0 1248899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhhee
Q psy3652         325 WLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRS  375 (394)
Q Consensus       325 ~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k  375 (394)
                      ++  .++++|.|+||.... .++..||||+|.||+|+++|.+++++|++.|
T Consensus       401 ~~--~~l~~G~v~iN~~~~-~~~~~pfGG~k~SG~G~~~g~~~~~~~~~~k  448 (448)
T TIGR01780       401 VA--EALEYGMVGINTGLI-SNVVAPFGGVKQSGLGREGSKYGIEEYLETK  448 (448)
T ss_pred             HH--HhCCccEEEECCCCC-CCCCCCCCCcccccCCccchHHHHHHHhccC
Confidence            99  889999999998643 4567899999999999999999999999875

SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070).

>cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins

Probab=100.00  E-value=7.4e-70  Score=551.56  Aligned_cols=325  Identities=30%  Similarity=0.457  Sum_probs=299.5

Q ss_pred             eeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCChHHhHH
Q psy3652          52 IPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIG  131 (394)
Q Consensus        52 ~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~  131 (394)
                      ++++||+||+++++++.++.+|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++.
T Consensus         1 ~~~~~P~t~~~~~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~   80 (453)
T cd07094           1 LDVHNPYDGEVIGKVPADDRADAEEALATARAGAENRRALPPHERMAILERAADLLKKRAEEFAKIIACEGGKPIKDARV   80 (453)
T ss_pred             CCccCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH
Confidence            36789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhhhhccCcccCCCC----CCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh------------
Q psy3652         132 EVQEFIDICDYAVGLSRTYSGSILPSER----PGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL------------  195 (394)
Q Consensus       132 ev~~~~~~l~~~a~~~~~~~~~~~~~~~----~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL------------  195 (394)
                      |+..+++.++++++.++++.++..+...    .+...++.++|+|||++|+|||||+.+.++++++||            
T Consensus        81 ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~VI~Kps~  160 (453)
T cd07094          81 EVDRAIDTLRLAAEEAERIRGEEIPLDATQGSDNRLAWTIREPVGVVLAITPFNFPLNLVAHKLAPAIATGCPVVLKPAS  160 (453)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCccccccccccCCCceEEEEEeccceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCC
Confidence            9999999999999988877665433321    244567789999999999999999999999999999            


Q ss_pred             -----------------------------------------------------hHHHHHh--hhhhhccccCCCCeEEEe
Q psy3652         196 -----------------------------------------------------VGVAVQS--RFGKLLLELGGNNAIIVN  220 (394)
Q Consensus       196 -----------------------------------------------------~g~~i~~--~~~~~~lElgGk~p~iV~  220 (394)
                                                                           +|+.|++  .++|+++|+|||||+||+
T Consensus       161 ~~p~~~~~l~~~l~~ag~P~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a~~~~~~lelGGk~~~iV~  240 (453)
T cd07094         161 KTPLSALELAKILVEAGVPEGVLQVVTGEREVLGDAFAADERVAMLSFTGSAAVGEALRANAGGKRIALELGGNAPVIVD  240 (453)
T ss_pred             cchHHHHHHHHHHHHcCCCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHcCCCceEEecCCCCceEEC
Confidence                                                                 6666765  457899999999999999


Q ss_pred             cCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc---------------------------------------------
Q psy3652         221 EDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK---------------------------------------------  255 (394)
Q Consensus       221 ~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~---------------------------------------------  255 (394)
                      +|||++.|++.+++++|.|+||.|++++|||||++                                             
T Consensus       241 ~dadl~~aa~~i~~~~~~~~GQ~C~a~~~i~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~  320 (453)
T cd07094         241 RDADLDAAIEALAKGGFYHAGQVCISVQRIYVHEELYDEFIEAFVAAVKKLKVGDPLDEDTDVGPLISEEAAERVERWVE  320 (453)
T ss_pred             CCCCHHHHHHHHHHHHHHhcCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999                                             


Q ss_pred             --------c---CCCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHH
Q psy3652         256 --------K---IDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFK  324 (394)
Q Consensus       256 --------~---~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~~gLsa~v~t~d~~~a~~  324 (394)
                              .   ....|+|++|||+.+++++|+++++|+||||++|++|+|+||||+++|+++|||++||||+|..++++
T Consensus       321 ~a~~~Ga~v~~gg~~~g~~~~Ptvl~~~~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~a~~  400 (453)
T cd07094         321 EAVEAGARLLCGGERDGALFKPTVLEDVPRDTKLSTEETFGPVVPIIRYDDFEEAIRIANSTDYGLQAGIFTRDLNVAFK  400 (453)
T ss_pred             HHHHCCCEEEeCccCCCeEEeCEEEeCCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHhCCCCCCeeEEECCCHHHHHH
Confidence                    0   01357899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEE
Q psy3652         325 WLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVT  378 (394)
Q Consensus       325 ~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~  378 (394)
                      ++  .++++|+|+||+++....+.+||||+|.||+|+++|.+++++|++.|+++
T Consensus       401 ~~--~~l~~g~v~iN~~~~~~~~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~i~  452 (453)
T cd07094         401 AA--EKLEVGGVMVNDSSAFRTDWMPFGGVKESGVGREGVPYAMEEMTEEKTVV  452 (453)
T ss_pred             HH--HhcCcCeEEEcCCCCCCCCCCCCCCccccccCcCChHHHHHHHhceeEEe
Confidence            99  88999999999875554568999999999999999999999999999985

ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences.

>TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN

Probab=100.00  E-value=6.4e-70  Score=569.90  Aligned_cols=338  Identities=25%  Similarity=0.297  Sum_probs=300.8

Q ss_pred             CceeCCeecc-CCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHH-HHHhhcCChhhHHHHHHHHHHHHhhCHHHHH
Q psy3652          38 GVYDGTSWKA-NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAA-YAAWAALPAPRRGEIVRQIGDALRHKLVPLG  115 (394)
Q Consensus        38 ~~~i~G~~~~-~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A-~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~  115 (394)
                      ++||||+|+. ++.+++++||+||+++++++.++ +|+++||++|++| |+.|+.+|.++|+++|++++++|++++++|+
T Consensus         2 ~~~i~g~~~~~~~~~~~v~nP~tg~~i~~~~~~~-~dv~~Av~~A~~aa~~~W~~~~~~eR~~~L~~~a~~l~~~~~ela   80 (663)
T TIGR02278         2 QSYLSGEWRTGQGEGVPVRDASTGEVLARVTSEG-LDVAAAVAWAREVGGPALRALTFHERARMLKALAQYLSERKEALY   80 (663)
T ss_pred             ceeECCEEEcCCCCeEeccCCCCCCEEEEEcCCc-HHHHHHHHHHHHhcchhhhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5799999974 46789999999999999999999 6999999999996 9999999999999999999999999999999


Q ss_pred             HHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhcc--------CcccCCCCCC-ceeEeeeccc-eeEEEEccCCchhH
Q psy3652         116 QLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYS--------GSILPSERPG-HVLLENWNPL-GVVGIISAFNFPVA  185 (394)
Q Consensus       116 ~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~--------~~~~~~~~~~-~~~~~~~~P~-GVV~~I~p~N~P~~  185 (394)
                      + +++|+|||+.+++.|+..+++.++|+++.+++..        ++..+...++ ...++.++|+ |||++|+|||||+.
T Consensus        81 ~-~~~e~GK~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~Gvv~~I~pwN~P~~  159 (663)
T TIGR02278        81 A-LAATTGATRRDNWVDIDGGIGTLFTYSSLGRRELPDANLIPEDEFEPLSKDGSFQGRHILTPKGGVAVQINAFNFPVW  159 (663)
T ss_pred             H-HHHHcCCCHHHHHHHHHHHHHHHHHHHHhhhhhccccccccCCceeccCCCCccceEEEEEeCCceEEEEcCCchHHH
Confidence            9 5999999999999999999999999999877632        3333322122 2457889998 99999999999999


Q ss_pred             hHHHHHHHHh---------------------------------------------------------------hHHHHHh
Q psy3652         186 VYGWNAAIAL---------------------------------------------------------------VGVAVQS  202 (394)
Q Consensus       186 ~~~~~~~~aL---------------------------------------------------------------~g~~i~~  202 (394)
                      +.++++++||                                                               +|+.|++
T Consensus       160 ~~~~~~~~ALaaGN~Vv~KPs~~tp~~~~~l~~~~~~aG~lP~gv~~~v~g~~~~~~~~~~~~~~V~FTGS~~~G~~i~~  239 (663)
T TIGR02278       160 GLLEKFAPAFLAGVPTLAKPATPTAYVAEALVRTMVESGLLPEGSLQLICGSAGDLLDHLDHRDVVAFTGSAATADRLRA  239 (663)
T ss_pred             HHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCcEEEEeCChHHHHhcCCCCCEEEEECCHHHHHHHHH
Confidence            9999999999                                                               7777765


Q ss_pred             ------hhhhhccccCCCCeEEEecCCC-----HHHHHHHHHHHhhCcCCCcccCCceEEEecc----------------
Q psy3652         203 ------RFGKLLLELGGNNAIIVNEDAD-----LNLAQQCLVFACCGTAGQRCTTTRRLFLHKK----------------  255 (394)
Q Consensus       203 ------~~~~~~lElgGk~p~iV~~dAD-----l~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~----------------  255 (394)
                            +++|+++|||||||+||++|||     ++.|++.+++++|.|+||.|++++|||||++                
T Consensus       240 ~aaaa~~~~~~~lELGGk~p~IV~~dAd~~~~dl~~aa~~i~~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l  319 (663)
T TIGR02278       240 HPNVLERGIRFNAEADSLNAAILGEDATPDEPEFDLFAQEIVRELTIKAGQKCTAIRRVIVPKALLEAVLKALQARLAKV  319 (663)
T ss_pred             hHhHHhcCceEEEEcCCCCeEEEcCCCCccchhHHHHHHHHHHHHHhcCCCCccCCceEEEeHHHHHHHHHHHHHHHHhc
Confidence                  3579999999999999999999     9999999999999999999999999999999                


Q ss_pred             ------------------------------------------cCCCCCceecCeEEEcCCCCC-cccccccccceEEEEe
Q psy3652         256 ------------------------------------------KIDRPGYFVEPTIVTGLPHNS-RVVHRETFAPIVYVFP  292 (394)
Q Consensus       256 ------------------------------------------~~~~~g~~~~Ptvl~~v~~~~-~i~~eE~FGPvl~v~~  292 (394)
                                                                ..+..|+|++|||+.+++++| .+++||+||||++|++
T Consensus       320 ~vG~p~~~~t~~Gpli~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~g~~~~PTvl~~~~~~~~~i~~eE~FGPVl~V~~  399 (663)
T TIGR02278       320 VLGDPREEGVDMGPLVSLEQRADVEAAVAALLAAGAEVRLGGPGRLDGAFFPPTLLLAEDPWAGAVHATEAFGPVATFFP  399 (663)
T ss_pred             cCCCccccCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCeeEccEEEeeCCcchhhHHhccccCCeEEEEe
Confidence                                                      001248999999999998886 7999999999999999


Q ss_pred             eCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHhhccccc--ceeEEEE-cCC-------CCCCCCCCCccCCCCCCCCCC
Q psy3652         293 FDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGS--DCGLINV-NIP-------TNGAEIGGAFGGEKYTGGGRE  362 (394)
Q Consensus       293 ~~~~~eAi~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~--~~g~V~i-N~~-------~~~~~~~~pfGG~~~SG~G~~  362 (394)
                      |+|.||||+++|+++|||++||||+|.+.+++++  .++  ++|+||| |.+       .....+.+||||+|.||+|++
T Consensus       400 ~~~~~eai~~aN~~~~gL~a~vft~d~~~~~~~~--~~l~~~~G~v~InN~~~~~~~~~~~~~~~~~pfGG~k~SG~G~~  477 (663)
T TIGR02278       400 YGDRAEAARLAARGGGSLVATLATSDPEEARQFI--LGLAPYHGRLHILNRDDAAESTGHGSPLPRLLHGGPGRAGGGEE  477 (663)
T ss_pred             eCCHHHHHHHHHcCCCCceEEEEeCCHHHHHHHH--HHHHhhCCEEEECCCcccccccCCCCCCCCCCCCCCccCcCCCc
Confidence            9999999999999999999999999999999999  778  8999999 641       112235689999999999999


Q ss_pred             c-hHHHHHhhhheeEEEE
Q psy3652         363 S-GSDSWKQYCRRSTVTI  379 (394)
Q Consensus       363 ~-g~~~l~~f~~~k~v~~  379 (394)
                      + |.+++++|++.|++..
T Consensus       478 ~g~~~~l~~f~~~k~v~~  495 (663)
T TIGR02278       478 LGGLRSVKHYMQRTAIQG  495 (663)
T ss_pred             cchHHHHHHhceeEEEEc
Confidence            4 6899999999999865

This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species.

>PRK11903 aldehyde dehydrogenase; Provisional

Probab=100.00  E-value=7.8e-70  Score=556.03  Aligned_cols=344  Identities=23%  Similarity=0.289  Sum_probs=301.1

Q ss_pred             CCCCCCceeCCeec-cCCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHH-HHhhcCChhhHHHHHHHHHHHHhhC
Q psy3652          33 GSVNPGVYDGTSWK-ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAY-AAWAALPAPRRGEIVRQIGDALRHK  110 (394)
Q Consensus        33 ~~~~~~~~i~G~~~-~~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~-~~w~~~~~~~R~~~L~~~a~~l~~~  110 (394)
                      |++..++||||+|+ .++.+++++||+||+++++++. +.+|+++|+++|++|| +.|+.+|+.+|+++|++++++|+++
T Consensus         1 ~~~~~~~~i~G~~~~~~~~~~~~~nP~tge~l~~v~~-~~~dv~~Av~aA~~A~~~~W~~~~~~eR~~~L~~~a~~l~~~   79 (521)
T PRK11903          1 MTELLANYVAGRWQAGSGAGTPLFDPVTGEELVRVSA-TGLDLAAAFAFAREQGGAALRALTYAQRAALLAAIVKVLQAN   79 (521)
T ss_pred             CcchhhhhCCCEEEcCCCCeeeeECCCCCCEEEEecC-ChHHHHHHHHHHHHhhhhhhhhCCHHHHHHHHHHHHHHHHHH
Confidence            45566789999998 4467899999999999999997 8899999999999995 9999999999999999999999999


Q ss_pred             HHHHHHHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCcccCCCC--------CCceeEeeecc-ceeEEEEccCC
Q psy3652         111 LVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSER--------PGHVLLENWNP-LGVVGIISAFN  181 (394)
Q Consensus       111 ~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~--------~~~~~~~~~~P-~GVV~~I~p~N  181 (394)
                      +++|++++++|+|||+.+++.|+..+++.++|++++++.+.+.......        .....++.++| +|||++|+|||
T Consensus        80 ~~ela~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~pwN  159 (521)
T PRK11903         80 RDAYYDIATANSGTTRNDSAVDIDGGIFTLGYYAKLGAALGDARLLRDGEAVQLGKDPAFQGQHVLVPTRGVALFINAFN  159 (521)
T ss_pred             HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCccccccccccccceEEEecCcceEEEECCcc
Confidence            9999999999999999999999999999999999988766443221110        12224567899 69999999999


Q ss_pred             chhHhHHHHHHHHh---------------------------------------------------------------hHH
Q psy3652         182 FPVAVYGWNAAIAL---------------------------------------------------------------VGV  198 (394)
Q Consensus       182 ~P~~~~~~~~~~aL---------------------------------------------------------------~g~  198 (394)
                      ||+.+..+++++||                                                               +|+
T Consensus       160 ~P~~~~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~ag~lP~gv~~~v~g~~~~~~~~l~~v~~v~fTGS~~~G~  239 (521)
T PRK11903        160 FPAWGLWEKAAPALLAGVPVIVKPATATAWLTQRMVKDVVAAGILPAGALSVVCGSSAGLLDHLQPFDVVSFTGSAETAA  239 (521)
T ss_pred             hHHHHHHHHHHHHHHcCCeEEEEcCCcChHHHHHHHHHHHHhCCCCcCceEEeeCCchHHHhcccCCCEEEEECCHHHHH
Confidence            99999999999999                                                               677


Q ss_pred             HHHh------hhhhhccccCCCCeEEEecCCC-----HHHHHHHHHHHhhCcCCCcccCCceEEEecc------------
Q psy3652         199 AVQS------RFGKLLLELGGNNAIIVNEDAD-----LNLAQQCLVFACCGTAGQRCTTTRRLFLHKK------------  255 (394)
Q Consensus       199 ~i~~------~~~~~~lElgGk~p~iV~~dAD-----l~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~------------  255 (394)
                      .+++      +++|+++|||||||+||++|||     ++.+++.+++++|.|+||.|++++|||||++            
T Consensus       240 ~v~~~aa~~~~~~~~~lElGGknp~IV~~dAd~~~~~~~~aa~~i~~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~L~~~  319 (521)
T PRK11903        240 VLRSHPAVVQRSVRVNVEADSLNSALLGPDAAPGSEAFDLFVKEVVREMTVKSGQKCTAIRRIFVPEALYDAVAEALAAR  319 (521)
T ss_pred             HHHhhhhhhccCceeEeeccccCceEEccCCcccchhHHHHHHHHHHHHHhccCCCccCCeEEEEehhHHHHHHHHHHHH
Confidence            7765      3578999999999999999999     5999999999999999999999999999999            


Q ss_pred             ---------------------------------------------cC-------CCCCceecCeEEEcCCC--CCccccc
Q psy3652         256 ---------------------------------------------KI-------DRPGYFVEPTIVTGLPH--NSRVVHR  281 (394)
Q Consensus       256 ---------------------------------------------~~-------~~~g~~~~Ptvl~~v~~--~~~i~~e  281 (394)
                                                                   ..       +..|+|++|||+.++++  ++.+++|
T Consensus       320 ~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~~~~ga~vl~gg~~~~~~~~~~~~g~~~~PTvl~~~~~~~~~~i~~e  399 (521)
T PRK11903        320 LAKTTVGNPRNDGVRMGPLVSRAQLAAVRAGLAALRAQAEVLFDGGGFALVDADPAVAACVGPTLLGASDPDAATAVHDV  399 (521)
T ss_pred             HHhccCCCCCCCcCccCCCCCHHHHHHHHHHHHHHhcCCEEEECCccCCCCCCCCCCCeEEcCEEEeccCCCccchHHhC
Confidence                                                         00       01378999999986554  4789999


Q ss_pred             ccccceEEEEeeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHhhccccc--ceeEEEEcCCCC--------CCCCCCCc
Q psy3652         282 ETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGS--DCGLINVNIPTN--------GAEIGGAF  351 (394)
Q Consensus       282 E~FGPvl~v~~~~~~~eAi~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~--~~g~V~iN~~~~--------~~~~~~pf  351 (394)
                      |+||||++|++|+|+||||+++|+++|||++||||+|...+.+++  .++  ++|+|+||..+.        ...+.+||
T Consensus       400 E~FGPvl~V~~~~~~~eai~~~N~~~~gL~asvft~d~~~~~~~~--~~l~~~~G~V~iN~~~~~~~~~~~~~~~~~~Pf  477 (521)
T PRK11903        400 EVFGPVATLLPYRDAAHALALARRGQGSLVASVYSDDAAFLAAAA--LELADSHGRVHVISPDVAALHTGHGNVMPQSLH  477 (521)
T ss_pred             cccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHH--HHHHHhCCEEEEcCcccccccccCCCCCCCCCC
Confidence            999999999999999999999999999999999999999999999  788  899999997532        23457899


Q ss_pred             cCCCCCCCCCCc-hHHHHHhhhheeEEEE
Q psy3652         352 GGEKYTGGGRES-GSDSWKQYCRRSTVTI  379 (394)
Q Consensus       352 GG~~~SG~G~~~-g~~~l~~f~~~k~v~~  379 (394)
                      ||+|.||+|+++ |.+++++|++.|++..
T Consensus       478 GG~k~SG~Gr~~g~~~~l~~~t~~~~~~~  506 (521)
T PRK11903        478 GGPGRAGGGEELGGLRALAFYHRRSAVQA  506 (521)
T ss_pred             CCCCcCcCCcccccHHHHHHHhccceeeC
Confidence            999999999995 4899999999877643

>PLN02174 aldehyde dehydrogenase family 3 member H1

Probab=100.00  E-value=8.6e-70  Score=549.07  Aligned_cols=309  Identities=20%  Similarity=0.256  Sum_probs=281.3

Q ss_pred             CHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCChHHhHH-HHHHHHHHHHHHHHhhh
Q psy3652          70 NVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIG-EVQEFIDICDYAVGLSR  148 (394)
Q Consensus        70 ~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~~~  148 (394)
                      ...|+++|+++|++||+.|+.+|.++|.++|++++++|++|+++|++++++|+|||..++.. |+..+++.++|+++.++
T Consensus         8 ~~~~v~~av~~a~~af~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~l~~e~GKp~~~a~~~Ev~~~~~~~~~~~~~~~   87 (484)
T PLN02174          8 GAADASILVTELRRSFDDGVTRGYEWRVTQLKKLMIICDNHEPEIVAALRDDLGKPELESSVYEVSLLRNSIKLALKQLK   87 (484)
T ss_pred             CHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999999999999999999999999999964 99999999999999888


Q ss_pred             hccC----cccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh-----------------------------
Q psy3652         149 TYSG----SILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL-----------------------------  195 (394)
Q Consensus       149 ~~~~----~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL-----------------------------  195 (394)
                      ++.+    ..... ..+...++.++|+|||++|+|||||+.+.++++++||                             
T Consensus        88 ~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPse~tp~~~~~l~~l~~~~l  166 (484)
T PLN02174         88 NWMAPEKAKTSLT-TFPASAEIVSEPLGVVLVISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPASSALLAKLLEQYL  166 (484)
T ss_pred             HHhcccccccccc-cCCcceEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhC
Confidence            7654    22111 1233467899999999999999999999999999999                             


Q ss_pred             ---------------------------------hHHHHHh----hhhhhccccCCCCeEEEecCCCHHHHHHHHHHHhh-
Q psy3652         196 ---------------------------------VGVAVQS----RFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACC-  237 (394)
Q Consensus       196 ---------------------------------~g~~i~~----~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~-  237 (394)
                                                       +|+.|++    +++|++||||||||+||++|||++.|++.+++++| 
T Consensus       167 p~gvv~vv~G~~~~~~~l~~~~vd~V~FTGS~~~G~~I~~~aa~~l~~v~LELGGk~p~iV~~dADl~~Aa~~i~~g~f~  246 (484)
T PLN02174        167 DSSAVRVVEGAVTETTALLEQKWDKIFYTGSSKIGRVIMAAAAKHLTPVVLELGGKSPVVVDSDTDLKVTVRRIIAGKWG  246 (484)
T ss_pred             CCCEEEEEECChHHHHHHhcccCCEEEEECChHHHHHHHHHHHhcCCcEEEecCCCCeEEEcCCCCHHHHHHHHHHHHhh
Confidence                                             7777765    57899999999999999999999999999999999 


Q ss_pred             CcCCCcccCCceEEEecc--------------------------------------------------------cCCCCC
Q psy3652         238 GTAGQRCTTTRRLFLHKK--------------------------------------------------------KIDRPG  261 (394)
Q Consensus       238 ~~~GQ~C~a~~rv~V~~~--------------------------------------------------------~~~~~g  261 (394)
                      .|+||.|++++|||||++                                                        ..+..|
T Consensus       247 ~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~Gpli~~~~~~~v~~~i~~a~~ga~~~~GG~~~~~g  326 (484)
T PLN02174        247 CNNGQACISPDYILTTKEYAPKVIDAMKKELETFYGKNPMESKDMSRIVNSTHFDRLSKLLDEKEVSDKIVYGGEKDREN  326 (484)
T ss_pred             CCCCCCCCcCcEEEEeHHHHHHHHHHHHHHHHhhcCCCCcccCCcCCCCCHHHHHHHHHHHHHHHcCCEEEECCCcCCCC
Confidence            699999999999999999                                                        001238


Q ss_pred             ceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCC
Q psy3652         262 YFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIP  341 (394)
Q Consensus       262 ~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~  341 (394)
                      +|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++  .++++|.|+||++
T Consensus       327 ~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eai~~aN~~~~gLaa~vft~d~~~a~~~~--~~l~aG~v~IN~~  404 (484)
T PLN02174        327 LKIAPTILLDVPLDSLIMSEEIFGPLLPILTLNNLEESFDVIRSRPKPLAAYLFTHNKKLKERFA--ATVSAGGIVVNDI  404 (484)
T ss_pred             CEEEEEEEecCCCCChhhcCCcCCCeEEEecCCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHH--HcCCcceEEECCC
Confidence            89999999999999999999999999999999999999999999999999999999999999999  8899999999986


Q ss_pred             CCCC-CCCCCccCCCCCCCCCCchHHHHHhhhheeEEEEec
Q psy3652         342 TNGA-EIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTINH  381 (394)
Q Consensus       342 ~~~~-~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~~~  381 (394)
                      .... .+.+||||+|.||+|+++|.+++++|++.|+|+++.
T Consensus       405 ~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~  445 (484)
T PLN02174        405 AVHLALHTLPFGGVGESGMGAYHGKFSFDAFSHKKAVLYRS  445 (484)
T ss_pred             cCCCCCCCCCCCCcCccccCccchHHHHHHhcceEEEEECC
Confidence            5332 367899999999999999999999999999998873

>cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like

Probab=100.00  E-value=1.4e-69  Score=549.37  Aligned_cols=326  Identities=32%  Similarity=0.501  Sum_probs=297.8

Q ss_pred             eeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCChHHhHH
Q psy3652          52 IPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIG  131 (394)
Q Consensus        52 ~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~  131 (394)
                      ++++||+||+++++++.++.+++++++++|++||+.|+.+|.++|.++|++++++|++++++|++++++|+|||..+++.
T Consensus         1 ~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~   80 (452)
T cd07147           1 LEVTNPYTGEVVARVALAGPDDIEEAIAAAVKAFRPMRALPAHRRAAILLHCVARLEERFEELAETIVLEAGKPIKDARG   80 (452)
T ss_pred             CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH
Confidence            46899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhhhhccCcccCCC----CCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh------------
Q psy3652         132 EVQEFIDICDYAVGLSRTYSGSILPSE----RPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL------------  195 (394)
Q Consensus       132 ev~~~~~~l~~~a~~~~~~~~~~~~~~----~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL------------  195 (394)
                      |+..+++.++++++.+.++.++..+..    ..+...++.++|+|||++|+|||||+.+.++++++||            
T Consensus        81 ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VIlKps~  160 (452)
T cd07147          81 EVARAIDTFRIAAEEATRIYGEVLPLDISARGEGRQGLVRRFPIGPVSAITPFNFPLNLVAHKVAPAIAAGCPFVLKPAS  160 (452)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCcccccccccCCCCceeEEEEeceeEEEEEcCCCcHHHHHHHHHHHHHHcCCEEEEECCC
Confidence            999999999999988776654432211    1234456789999999999999999999999999999            


Q ss_pred             ----------------------------------------------------hHHHHHhh--hhhhccccCCCCeEEEec
Q psy3652         196 ----------------------------------------------------VGVAVQSR--FGKLLLELGGNNAIIVNE  221 (394)
Q Consensus       196 ----------------------------------------------------~g~~i~~~--~~~~~lElgGk~p~iV~~  221 (394)
                                                                          +|+.|++.  .+|+++|+|||||+||++
T Consensus       161 ~~p~~~~~l~~~l~~ag~P~g~v~~v~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~v~~~a~~~~v~lelgG~~p~iV~~  240 (452)
T cd07147         161 RTPLSALILGEVLAETGLPKGAFSVLPCSRDDADLLVTDERIKLLSFTGSPAVGWDLKARAGKKKVVLELGGNAAVIVDS  240 (452)
T ss_pred             CCcHHHHHHHHHHHHcCCCcCcEEEEeCCccchhHHhcCCCCCEEEEECCHHHHHHHHHHhCcCceEeecCCCCcEEECC
Confidence                                                                67777763  358999999999999999


Q ss_pred             CCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc----------------------------------------------
Q psy3652         222 DADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK----------------------------------------------  255 (394)
Q Consensus       222 dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~----------------------------------------------  255 (394)
                      |||++.|++.+++++|.|+||.|++++|||||++                                              
T Consensus       241 dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~  320 (452)
T cd07147         241 DADLDFAAQRIIFGAFYQAGQSCISVQRVLVHRSVYDEFKSRLVARVKALKTGDPKDDATDVGPMISESEAERVEGWVNE  320 (452)
T ss_pred             CCCHHHHHHHHHHHHHhccCCCCcCCcEEEEchhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999                                              


Q ss_pred             -------cC---CCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHh
Q psy3652         256 -------KI---DRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKW  325 (394)
Q Consensus       256 -------~~---~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~~gLsa~v~t~d~~~a~~~  325 (394)
                             .+   ..+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++
T Consensus       321 a~~~Ga~~l~gg~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~a~~~  400 (452)
T cd07147         321 AVDAGAKLLTGGKRDGALLEPTILEDVPPDMEVNCEEVFGPVVTVEPYDDFDEALAAVNDSKFGLQAGVFTRDLEKALRA  400 (452)
T ss_pred             HHHCCCEEEecCCcCCEEEcCEEEeCCCCCChHHhCcCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHH
Confidence                   00   12478999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEE
Q psy3652         326 LGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTI  379 (394)
Q Consensus       326 ~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~  379 (394)
                      +  .++++|.|+||++++...+.+||||+|.||+|+++|.+++++|++.|+|++
T Consensus       401 ~--~~~~~G~v~vN~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~i~~  452 (452)
T cd07147         401 W--DELEVGGVVINDVPTFRVDHMPYGGVKDSGIGREGVRYAIEEMTEPRLLVI  452 (452)
T ss_pred             H--HHcCcceEEECCCCCCCCCCCCcCCccccccCCCChHHHHHHhcceeEEeC
Confidence            9  889999999998655445678999999999999999999999999999864

Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD.

>cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1

Probab=100.00  E-value=1.4e-69  Score=548.97  Aligned_cols=326  Identities=27%  Similarity=0.370  Sum_probs=296.8

Q ss_pred             eeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHH-hhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCChHHhH
Q psy3652          52 IPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAA-WAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGI  130 (394)
Q Consensus        52 ~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~-w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~  130 (394)
                      ++++||+||+++++++.++.+|+++|+++|++||+. |+.+|.++|.++|++++++|++++++|++++++|+|||..++.
T Consensus         1 ~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~~~~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~   80 (455)
T cd07148           1 LEVVNPFDLKPIGEVPTVDWAAIDKALDTAHALFLDRNNWLPAHERIAILERLADLMEERADELALLIAREGGKPLVDAK   80 (455)
T ss_pred             CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH
Confidence            367899999999999999999999999999999998 5679999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhhhhccCcccCCC----CCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh-----------
Q psy3652         131 GEVQEFIDICDYAVGLSRTYSGSILPSE----RPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL-----------  195 (394)
Q Consensus       131 ~ev~~~~~~l~~~a~~~~~~~~~~~~~~----~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL-----------  195 (394)
                      .|+...++.++++++.++.+.+...+..    .++...++.++|+|||++|+|||||+.+.++++++||           
T Consensus        81 ~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps  160 (455)
T cd07148          81 VEVTRAIDGVELAADELGQLGGREIPMGLTPASAGRIAFTTREPIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVKPA  160 (455)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCcccccccccCCCCceEEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEeeCC
Confidence            9999999999999998887766543321    1234567889999999999999999999999999999           


Q ss_pred             -----------------------------------------------------hHHHHHh---hhhhhccccCCCCeEEE
Q psy3652         196 -----------------------------------------------------VGVAVQS---RFGKLLLELGGNNAIIV  219 (394)
Q Consensus       196 -----------------------------------------------------~g~~i~~---~~~~~~lElgGk~p~iV  219 (394)
                                                                           +|+.|++   ..+|+++|+|||||+||
T Consensus       161 ~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~v~fTGs~~~G~~i~~~aa~~~~~~lElGG~~p~iV  240 (455)
T cd07148         161 LATPLSCLAFVDLLHEAGLPEGWCQAVPCENAVAEKLVTDPRVAFFSFIGSARVGWMLRSKLAPGTRCALEHGGAAPVIV  240 (455)
T ss_pred             CcccHHHHHHHHHHHHcCCCcCcEEEEeCChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhcCCcEEEecCCCCceEE
Confidence                                                                 6777765   24689999999999999


Q ss_pred             ecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc--------------------------------------------
Q psy3652         220 NEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK--------------------------------------------  255 (394)
Q Consensus       220 ~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~--------------------------------------------  255 (394)
                      ++|||++.|++.+++++|.|+||.|++++|||||++                                            
T Consensus       241 ~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i  320 (455)
T cd07148         241 DRSADLDAMIPPLVKGGFYHAGQVCVSVQRVFVPAEIADDFAQRLAAAAEKLVVGDPTDPDTEVGPLIRPREVDRVEEWV  320 (455)
T ss_pred             CCCCCHHHHHHHHHHHHHhcCCCCccCCeEEEEcHhHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCcCHHHHHHHHHHH
Confidence            999999999999999999999999999999999999                                            


Q ss_pred             ---------cC-C---CCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcCCCCcEEEEEcCCHHHH
Q psy3652         256 ---------KI-D---RPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNL  322 (394)
Q Consensus       256 ---------~~-~---~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~~gLsa~v~t~d~~~a  322 (394)
                               .+ .   ..|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.+
T Consensus       321 ~~a~~~Ga~vl~gg~~~~~~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~a~i~t~d~~~~  400 (455)
T cd07148         321 NEAVAAGARLLCGGKRLSDTTYAPTVLLDPPRDAKVSTQEIFGPVVCVYSYDDLDEAIAQANSLPVAFQAAVFTKDLDVA  400 (455)
T ss_pred             HHHHhCCCEEEeCCccCCCCeEcCEEEeCCCCCCHHHhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHH
Confidence                     00 0   1368899999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEE
Q psy3652         323 FKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTI  379 (394)
Q Consensus       323 ~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~  379 (394)
                      .+++  .++++|.|+||+++......+||||+|.||+|+++|.+++++|++.|++++
T Consensus       401 ~~~~--~~~~~g~v~iN~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~~~~  455 (455)
T cd07148         401 LKAV--RRLDATAVMVNDHTAFRVDWMPFAGRRQSGYGTGGIPYTMHDMTQEKMAVI  455 (455)
T ss_pred             HHHH--HHcCcCeEEECCCCCCCCCCCCCCcchhcccCCCchHHHHHHhhceeEEeC
Confidence            9999  889999999998754444568999999999999999999999999999863

Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.

>cd07101 ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like

Probab=100.00  E-value=2.2e-69  Score=547.82  Aligned_cols=323  Identities=32%  Similarity=0.470  Sum_probs=293.9

Q ss_pred             ecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCChHHhHHHHH
Q psy3652          55 INPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQ  134 (394)
Q Consensus        55 ~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~  134 (394)
                      .||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|++++++|++++++|++++++|+|||..++..|+.
T Consensus         1 ~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~a~~ev~   80 (454)
T cd07101           1 EAPFTGEPLGELPQSTPADVEAAFARARAAQRAWAARPFAERAAVFLRFHDLVLERRDELLDLIQLETGKARRHAFEEVL   80 (454)
T ss_pred             CcCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHHHHHH
Confidence            48999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhhhccCcc-cCCCCC-CceeEeeeccceeEEEEccCCchhHhHHHHHHHHh-----------------
Q psy3652         135 EFIDICDYAVGLSRTYSGSI-LPSERP-GHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL-----------------  195 (394)
Q Consensus       135 ~~~~~l~~~a~~~~~~~~~~-~~~~~~-~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL-----------------  195 (394)
                      .+++.++|++..+.++.+.. .+...+ ....+..++|+|||++|+|||||+.+.++++++||                 
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~  160 (454)
T cd07101          81 DVAIVARYYARRAERLLKPRRRRGAIPVLTRTTVNRRPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTALT  160 (454)
T ss_pred             HHHHHHHHHHHHHHHHhCCccccccCCCCceEEEEEEeccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCccchHH
Confidence            99999999998877654432 221111 23567889999999999999999999999999999                 


Q ss_pred             ----------------------------------------------hHHHHHh----hhhhhccccCCCCeEEEecCCCH
Q psy3652         196 ----------------------------------------------VGVAVQS----RFGKLLLELGGNNAIIVNEDADL  225 (394)
Q Consensus       196 ----------------------------------------------~g~~i~~----~~~~~~lElgGk~p~iV~~dADl  225 (394)
                                                                    +|+.|++    .++|+++|||||||+||++|||+
T Consensus       161 ~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~~~~V~fTGs~~~g~~i~~~aa~~~~~~~lElgG~~p~iV~~dAdl  240 (454)
T cd07101         161 ALWAVELLIEAGLPRDLWQVVTGPGSEVGGAIVDNADYVMFTGSTATGRVVAERAGRRLIGCSLELGGKNPMIVLEDADL  240 (454)
T ss_pred             HHHHHHHHHHcCcCCCcEEEEeCCcHHHHHHHHhCCCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCceEEECCCCCH
Confidence                                                          6777765    45799999999999999999999


Q ss_pred             HHHHHHHHHHhhCcCCCcccCCceEEEecc--------------------------------------------------
Q psy3652         226 NLAQQCLVFACCGTAGQRCTTTRRLFLHKK--------------------------------------------------  255 (394)
Q Consensus       226 ~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~--------------------------------------------------  255 (394)
                      +.|++.+++++|.|+||.|++++|||||++                                                  
T Consensus       241 ~~a~~~i~~~~~~~sGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~~~~~~~~~gpli~~~~~~~v~~~v~~a~~~  320 (454)
T cd07101         241 DKAAAGAVRACFSNAGQLCVSIERIYVHESVYDEFVRRFVARTRALRLGAALDYGPDMGSLISQAQLDRVTAHVDDAVAK  320 (454)
T ss_pred             HHHHHHHHHHHHhcCCCCcccCeEEEEcHHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHC
Confidence            999999999999999999999999999999                                                  


Q ss_pred             ---cC-------CCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHh
Q psy3652         256 ---KI-------DRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKW  325 (394)
Q Consensus       256 ---~~-------~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~~gLsa~v~t~d~~~a~~~  325 (394)
                         .+       +..|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++
T Consensus       321 Ga~vl~gg~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~a~~~  400 (454)
T cd07101         321 GATVLAGGRARPDLGPYFYEPTVLTGVTEDMELFAEETFGPVVSIYRVADDDEAIELANDTDYGLNASVWTRDGARGRRI  400 (454)
T ss_pred             CCEEEeCCCCCCCCCCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHH
Confidence               00       01368999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcccccceeEEEEcCCCCC--CCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEE
Q psy3652         326 LGPQGSDCGLINVNIPTNG--AEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTI  379 (394)
Q Consensus       326 ~~~~~~~~g~V~iN~~~~~--~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~  379 (394)
                      +  .++++|.|+||.+...  ..+.+||||+|.||+|+++|.+++++|++.|++++
T Consensus       401 ~--~~l~~G~v~iN~~~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~v~~  454 (454)
T cd07101         401 A--ARLRAGTVNVNEGYAAAWASIDAPMGGMKDSGLGRRHGAEGLLKYTETQTVAV  454 (454)
T ss_pred             H--HhcCcceEEECCCCCcCcCCCCCCCCcccccccCccchHHHHHHhcceEEEeC
Confidence            9  8899999999986432  45678999999999999999999999999998863

Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s).

>cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1

Probab=100.00  E-value=5.1e-69  Score=545.84  Aligned_cols=324  Identities=30%  Similarity=0.551  Sum_probs=298.7

Q ss_pred             eecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCChHHhHHHH
Q psy3652          54 SINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEV  133 (394)
Q Consensus        54 v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev  133 (394)
                      ++||+||+++++++.++.+|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++.|+
T Consensus         1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev   80 (457)
T cd07090           1 VIEPATGEVLATVHCAGAEDVDLAVKSAKAAQKEWSATSGMERGRILRKAADLLRERNDEIARLETIDNGKPIEEARVDI   80 (457)
T ss_pred             CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHH
Confidence            47999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh------------------
Q psy3652         134 QEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL------------------  195 (394)
Q Consensus       134 ~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL------------------  195 (394)
                      ..+++.++|+++..+.+.++..+.. .+...++.++|+|||++|+|||||+.+.++++++||                  
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~~~~~  159 (457)
T cd07090          81 DSSADCLEYYAGLAPTLSGEHVPLP-GGSFAYTRREPLGVCAGIGAWNYPIQIASWKSAPALACGNAMVYKPSPFTPLTA  159 (457)
T ss_pred             HHHHHHHHHHHHHHHHhCCeeeccC-CCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHhcCCeeeecCCCcCcHHH
Confidence            9999999999998877665543322 245567889999999999999999999999999999                  


Q ss_pred             ----------------------------------------------hHHHHHh----hhhhhccccCCCCeEEEecCCCH
Q psy3652         196 ----------------------------------------------VGVAVQS----RFGKLLLELGGNNAIIVNEDADL  225 (394)
Q Consensus       196 ----------------------------------------------~g~~i~~----~~~~~~lElgGk~p~iV~~dADl  225 (394)
                                                                    +|+.|++    +++|+++|||||||+||++|||+
T Consensus       160 ~~l~~~~~~aGlP~g~~~~v~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~dAdl  239 (457)
T cd07090         160 LLLAEILTEAGLPDGVFNVVQGGGETGQLLCEHPDVAKVSFTGSVPTGKKVMSAAAKGIKHVTLELGGKSPLIIFDDADL  239 (457)
T ss_pred             HHHHHHHHHcCCCcccEEEEeCChhhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCCceEEecCCCCceEECCCCCH
Confidence                                                          6676765    45799999999999999999999


Q ss_pred             HHHHHHHHHHhhCcCCCcccCCceEEEecc--------------------------------------------------
Q psy3652         226 NLAQQCLVFACCGTAGQRCTTTRRLFLHKK--------------------------------------------------  255 (394)
Q Consensus       226 ~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~--------------------------------------------------  255 (394)
                      +.|++.+++++|.|+||.|++++|||||++                                                  
T Consensus       240 ~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~  319 (457)
T cd07090         240 ENAVNGAMMANFLSQGQVCSNGTRVFVQRSIKDEFTERLVERTKKIRIGDPLDEDTQMGALISEEHLEKVLGYIESAKQE  319 (457)
T ss_pred             HHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcccccCHHHHHHHHHHHHHHHHC
Confidence            999999999999999999999999999999                                                  


Q ss_pred             ---------cC--C---CCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcCCCCcEEEEEcCCHHH
Q psy3652         256 ---------KI--D---RPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTN  321 (394)
Q Consensus       256 ---------~~--~---~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~~gLsa~v~t~d~~~  321 (394)
                               ..  .   ..|+|+.|||+.+++++|+++++|+||||++|++|+|+||||+++|+++|||++||||+|.+.
T Consensus       320 Ga~v~~gg~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~deai~~~n~~~~gLsa~i~t~d~~~  399 (457)
T cd07090         320 GAKVLCGGERVVPEDGLENGFYVSPCVLTDCTDDMTIVREEIFGPVMSILPFDTEEEVIRRANDTTYGLAAGVFTRDLQR  399 (457)
T ss_pred             CCEEEECCCcCcccccCCCCeeECCEEEecCCCCChHHhCCCCCCeEEEEEECCHHHHHHHHhCCCcCceEEEEcCCHHH
Confidence                     00  0   137899999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEEec
Q psy3652         322 LFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTINH  381 (394)
Q Consensus       322 a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~~~  381 (394)
                      +++++  .++++|.|+||+.+ ...+.+||||+|.||+|+++|.+++++|++.|++.+++
T Consensus       400 ~~~~~--~~l~~G~v~iN~~~-~~~~~~pfGG~k~SG~G~~~g~~~~~~f~~~k~~~~~~  456 (457)
T cd07090         400 AHRVI--AQLQAGTCWINTYN-ISPVEVPFGGYKQSGFGRENGTAALEHYTQLKTVYVEM  456 (457)
T ss_pred             HHHHH--HhCCcCeEEECCCC-CCCCCCCcCCCccCcCCccchHHHHHHHhCeEEEEEeC
Confidence            99999  88999999999864 34567899999999999999999999999999998765

NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis.

>cd07120 ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like

Probab=100.00  E-value=2.4e-69  Score=546.37  Aligned_cols=321  Identities=30%  Similarity=0.465  Sum_probs=295.0

Q ss_pred             eecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHH--hhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCChHHhHH
Q psy3652          54 SINPSTGETIASVQQGNVQDYHRCIESSRAAYAA--WAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIG  131 (394)
Q Consensus        54 v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~--w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~  131 (394)
                      ++||+||+++++++.++.+|+++|+++|++||+.  |+. ++++|.++|++++++|++++++|++++++|+|||..+++.
T Consensus         1 ~~nP~t~~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~-~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~   79 (455)
T cd07120           1 SIDPATGEVIGTYADGGVAEAEAAIAAARRAFDETDWAH-DPRLRARVLLELADAFEANAERLARLLALENGKILGEARF   79 (455)
T ss_pred             CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence            4699999999999999999999999999999985  998 8999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh----------------
Q psy3652         132 EVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL----------------  195 (394)
Q Consensus       132 ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL----------------  195 (394)
                      |+..+++.++|+++.+++..+...+. .++...++.++|+|||++|+|||||+.+.++++++||                
T Consensus        80 Ev~~~i~~l~~~~~~~~~~~g~~~~~-~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKps~~~~~  158 (455)
T cd07120          80 EISGAISELRYYAGLARTEAGRMIEP-EPGSFSLVLREPMGVAGIIVPWNSPVVLLVRSLAPALAAGCTVVVKPAGQTAQ  158 (455)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCccccc-CCCceEEEEEecceeEEEECCCchHHHHHHHHHHHHHHcCCEEEeECCCCChH
Confidence            99999999999999888776654332 2345567899999999999999999999999999999                


Q ss_pred             --------------------------------------------------hHHHHHh----hhhhhccccCCCCeEEEec
Q psy3652         196 --------------------------------------------------VGVAVQS----RFGKLLLELGGNNAIIVNE  221 (394)
Q Consensus       196 --------------------------------------------------~g~~i~~----~~~~~~lElgGk~p~iV~~  221 (394)
                                                                        +|+.|++    ++||+++|+|||||+||++
T Consensus       159 ~~~~l~~~~~~aag~P~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lElGG~~~~IV~~  238 (455)
T cd07120         159 INAAIIRILAEIPSLPAGVVNLFTESGSEGAAHLVASPDVDVISFTGSTATGRAIMAAAAPTLKRLGLELGGKTPCIVFD  238 (455)
T ss_pred             HHHHHHHHHHHhcCCCccceEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCeeEECC
Confidence                                                              6677654    4578999999999999999


Q ss_pred             CCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc----------------------------------------------
Q psy3652         222 DADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK----------------------------------------------  255 (394)
Q Consensus       222 dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~----------------------------------------------  255 (394)
                      |||+|.|++.+++++|.|+||.|++++|||||++                                              
T Consensus       239 daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~~~~~i~~  318 (455)
T cd07120         239 DADLDAALPKLERALTIFAGQFCMAGSRVLVQRSIADEVRDRLAARLAAVKVGPGLDPASDMGPLIDRANVDRVDRMVER  318 (455)
T ss_pred             CCCHHHHHHHHHHHHHHhCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCCcCCccCHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999                                              


Q ss_pred             --------c--C---C---CCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcCCCCcEEEEEcCCH
Q psy3652         256 --------K--I---D---RPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDV  319 (394)
Q Consensus       256 --------~--~---~---~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~~gLsa~v~t~d~  319 (394)
                              .  .   +   ..|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.
T Consensus       319 a~~~ga~~~~~g~~~~~~~~~g~~~~Ptvl~~~~~d~~i~~~E~FgPvl~v~~~~~~deai~~~n~~~~gLs~~ift~d~  398 (455)
T cd07120         319 AIAAGAEVVLRGGPVTEGLAKGAFLRPTLLEVDDPDADIVQEEIFGPVLTLETFDDEAEAVALANDTDYGLAASVWTRDL  398 (455)
T ss_pred             HHHCCCEEEeCCccCcccCCCCceECCEEEecCCCCChhhhCcCcCceEEEeecCCHHHHHHHHhCCCCCceEEEEcCCH
Confidence                    0  0   1   1478999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEE
Q psy3652         320 TNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTI  379 (394)
Q Consensus       320 ~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~  379 (394)
                      +.+++++  .++++|.|+||++.. ..+.+||||+|.||+|+++|++++++|++.|++++
T Consensus       399 ~~a~~~~--~~l~~G~v~iN~~~~-~~~~~pfGG~k~SG~G~~~g~~~l~~ft~~k~v~~  455 (455)
T cd07120         399 ARAMRVA--RAIRAGTVWINDWNK-LFAEAEEGGYRQSGLGRLHGVAALEDFIEYKHIYL  455 (455)
T ss_pred             HHHHHHH--HhcCcceEEECCCCC-CCCCCCcCCccccccCccchHHHHHHHhceeEEeC
Confidence            9999999  889999999998653 45678999999999999999999999999999863

Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural.

>cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like

Probab=100.00  E-value=5.2e-69  Score=544.16  Aligned_cols=319  Identities=31%  Similarity=0.541  Sum_probs=292.8

Q ss_pred             eecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCChHHhHHHH
Q psy3652          54 SINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEV  133 (394)
Q Consensus        54 v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev  133 (394)
                      ++||+||+++++++.++.+|+++++++|++||+.|+.+|.++|.++|++++++|++++++|++++++|+|||..++..|+
T Consensus         1 ~~~P~tg~~~~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ev   80 (446)
T cd07106           1 VINPATGEVFASAPVASEAQLDQAVAAAKAAFPGWSATPLEERRAALLAIADAIEANAEELARLLTLEQGKPLAEAQFEV   80 (446)
T ss_pred             CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHH
Confidence            47999999999999999999999999999999999999999999999999999999999999999999999999998899


Q ss_pred             HHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh------------------
Q psy3652         134 QEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL------------------  195 (394)
Q Consensus       134 ~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL------------------  195 (394)
                      ..+++.++++++...  .+..... .++...+..++|+|||++|+|||||+.+.++++++||                  
T Consensus        81 ~~~~~~l~~~~~~~~--~~~~~~~-~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~  157 (446)
T cd07106          81 GGAVAWLRYTASLDL--PDEVIED-DDTRRVELRRKPLGVVAAIVPWNFPLLLAAWKIAPALLAGNTVVLKPSPFTPLCT  157 (446)
T ss_pred             HHHHHHHHHHHhhhh--cCccccC-CCCceEEEEEEcceEEEEEcCCChHHHHHHHHHHHHHHcCCEEEEECCccchHHH
Confidence            999999999988763  2222221 2344567889999999999999999999999999999                  


Q ss_pred             ---------------------------------------------hHHHHHh----hhhhhccccCCCCeEEEecCCCHH
Q psy3652         196 ---------------------------------------------VGVAVQS----RFGKLLLELGGNNAIIVNEDADLN  226 (394)
Q Consensus       196 ---------------------------------------------~g~~i~~----~~~~~~lElgGk~p~iV~~dADl~  226 (394)
                                                                   +|+.|++    +++|+++|+|||||+||++|||++
T Consensus       158 ~~l~~~~~~~lP~g~~~~v~g~~~~~~~l~~~~~vd~V~fTGs~~~g~~v~~~aa~~~~~~~lElGG~~p~iV~~dADl~  237 (446)
T cd07106         158 LKLGELAQEVLPPGVLNVVSGGDELGPALTSHPDIRKISFTGSTATGKKVMASAAKTLKRVTLELGGNDAAIVLPDVDID  237 (446)
T ss_pred             HHHHHHHHHhCCcCeEEEeeCChhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeeEEecCCCCeeEECCCCCHH
Confidence                                                         6677665    457999999999999999999999


Q ss_pred             HHHHHHHHHhhCcCCCcccCCceEEEecc---------------------------------------------------
Q psy3652         227 LAQQCLVFACCGTAGQRCTTTRRLFLHKK---------------------------------------------------  255 (394)
Q Consensus       227 ~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~---------------------------------------------------  255 (394)
                      .|++.+++++|.|+||.|++++|||||++                                                   
T Consensus       238 ~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~i~~a~~~g  317 (446)
T cd07106         238 AVAPKLFWGAFINSGQVCAAIKRLYVHESIYDEFCEALVALAKAAVVGDGLDPGTTLGPVQNKMQYDKVKELVEDAKAKG  317 (446)
T ss_pred             HHHHHHHHHHHHhcCCCCCCCcEEEEccccHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
Confidence            99999999999999999999999999999                                                   


Q ss_pred             --c------CCCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHhhc
Q psy3652         256 --K------IDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLG  327 (394)
Q Consensus       256 --~------~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~~gLsa~v~t~d~~~a~~~~~  327 (394)
                        .      ....|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++ 
T Consensus       318 a~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~~~-  396 (446)
T cd07106         318 AKVLAGGEPLDGPGYFIPPTIVDDPPEGSRIVDEEQFGPVLPVLKYSDEDEVIARANDSEYGLGASVWSSDLERAEAVA-  396 (446)
T ss_pred             CEEEeCCCcCCCCCeeEcCEEEeCCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHH-
Confidence              0      0113789999999999999999999999999999999999999999999999999999999999999999 


Q ss_pred             ccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEE
Q psy3652         328 PQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVT  378 (394)
Q Consensus       328 ~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~  378 (394)
                       .++++|.|+||++. ...+.+||||+|.||+|+++|.+++++|++.|+++
T Consensus       397 -~~~~~G~v~iN~~~-~~~~~~pfGG~~~SG~G~~~g~~~~~~~t~~k~v~  445 (446)
T cd07106         397 -RRLEAGTVWINTHG-ALDPDAPFGGHKQSGIGVEFGIEGLKEYTQTQVIN  445 (446)
T ss_pred             -HhCCccEEEECCCC-CCCCCCCCCCccccccCccchHHHHHHhhceeEEe
Confidence             88999999999875 45678999999999999999999999999999885

Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD.

>cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like

Probab=100.00  E-value=4.7e-69  Score=545.68  Aligned_cols=322  Identities=33%  Similarity=0.541  Sum_probs=296.9

Q ss_pred             eecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhh-cCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCChHHhHHH
Q psy3652          54 SINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWA-ALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGE  132 (394)
Q Consensus        54 v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~-~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~e  132 (394)
                      ++||+||+++++++.++.+|+++++++|++||+.|. .+|.++|.++|+++++.|++++++|++++++|+|||..+++.|
T Consensus         1 ~~~P~tg~~i~~~~~~~~~dv~~av~~a~~A~~~~~~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~e   80 (454)
T cd07109           1 VFDPSTGEVFARIARGGAADVDRAVQAARRAFESGWLRLSPAERGRLLLRIARLIREHADELARLESLDTGKPLTQARAD   80 (454)
T ss_pred             CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHHHH
Confidence            479999999999999999999999999999999876 9999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh-----------------
Q psy3652         133 VQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL-----------------  195 (394)
Q Consensus       133 v~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL-----------------  195 (394)
                      +..+++.++|+++..+++.+...+.. ++...+..++|+|||++|+|||||+.+.++++++||                 
T Consensus        81 v~~~~~~l~~~~~~~~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~  159 (454)
T cd07109          81 VEAAARYFEYYGGAADKLHGETIPLG-PGYFVYTVREPHGVTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAEDAPLT  159 (454)
T ss_pred             HHHHHHHHHHHHHHHHHhcCcccccC-CCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHH
Confidence            99999999999998877766544432 345567889999999999999999999999999999                 


Q ss_pred             ------------------------------------------------hHHHHHh----hhhhhccccCCCCeEEEecCC
Q psy3652         196 ------------------------------------------------VGVAVQS----RFGKLLLELGGNNAIIVNEDA  223 (394)
Q Consensus       196 ------------------------------------------------~g~~i~~----~~~~~~lElgGk~p~iV~~dA  223 (394)
                                                                      +|+.|++    +++|+++|+|||||+||++||
T Consensus       160 ~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~p~~lElgG~~~~iV~~da  239 (454)
T cd07109         160 ALRLAELAEEAGLPAGALNVVTGLGAEAGAALVAHPGVDHISFTGSVETGIAVMRAAAENVVPVTLELGGKSPQIVFADA  239 (454)
T ss_pred             HHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEECCCCCceEECCCC
Confidence                                                            6666664    467999999999999999999


Q ss_pred             CHHHHHHHHHHHhhCcCCCcccCCceEEEecc------------------------------------------------
Q psy3652         224 DLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK------------------------------------------------  255 (394)
Q Consensus       224 Dl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~------------------------------------------------  255 (394)
                      |++.|++.+++++|.|+||.|++++|||||++                                                
T Consensus       240 Dl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~G~p~~~~~~gpli~~~~~~~~~~~i~~a~~  319 (454)
T cd07109         240 DLEAALPVVVNAIIQNAGQTCSAGSRLLVHRSIYDEVLERLVERFRALRVGPGLEDPDLGPLISAKQLDRVEGFVARARA  319 (454)
T ss_pred             CHHHHHHHHHHHHHhccCCCCccCcEEEEcHHHHHHHHHHHHHHHHhCCCCCCcccCcCCCccCHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999                                                


Q ss_pred             -----cCC--------CCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcCCCCcEEEEEcCCHHHH
Q psy3652         256 -----KID--------RPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNL  322 (394)
Q Consensus       256 -----~~~--------~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~~gLsa~v~t~d~~~a  322 (394)
                           ...        ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.+
T Consensus       320 ~ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deAi~~~n~~~~gL~~~i~t~d~~~~  399 (454)
T cd07109         320 RGARIVAGGRIAEGAPAGGYFVAPTLLDDVPPDSRLAQEEIFGPVLAVMPFDDEAEAIALANGTDYGLVAGVWTRDGDRA  399 (454)
T ss_pred             CCCEEEeCCCcCcccCCCCcEECcEEEecCCCCChhhhCCCCCceEEEEecCCHHHHHHHhhCCCCCceEEEECCCHHHH
Confidence                 000        1478999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEE
Q psy3652         323 FKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVT  378 (394)
Q Consensus       323 ~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~  378 (394)
                      .+++  .++++|.|+||.......+.+||||+|.||+|+++|.+++++|++.|+++
T Consensus       400 ~~~~--~~l~~g~v~iN~~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~i~  453 (454)
T cd07109         400 LRVA--RRLRAGQVFVNNYGAGGGIELPFGGVKKSGHGREKGLEALYNYTQTKTVA  453 (454)
T ss_pred             HHHH--HhcCcCeEEECCCCCCCCCCCCcCCcccCcCCccchHHHHHHHhceeEEe
Confidence            9999  88999999999865345567899999999999999999999999999885

Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD.

>cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like

Probab=100.00  E-value=5.3e-69  Score=544.61  Aligned_cols=321  Identities=31%  Similarity=0.537  Sum_probs=295.3

Q ss_pred             ecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHH--hhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCChHHhHHH
Q psy3652          55 INPSTGETIASVQQGNVQDYHRCIESSRAAYAA--WAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGE  132 (394)
Q Consensus        55 ~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~--w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~e  132 (394)
                      +||+||+++++++.++.+|+++|+++|++||+.  |+.+|.++|.++|++++++|++++++|++++++|+|||..+++.|
T Consensus         2 ~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~e   81 (454)
T cd07118           2 RSPAHGVVVARYAEGTVEDVDAAVAAARKAFDKGPWPRMSGAERAAVLLKVADLIRARRERLALIETLESGKPISQARGE   81 (454)
T ss_pred             CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHH
Confidence            599999999999999999999999999999985  999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh-----------------
Q psy3652         133 VQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL-----------------  195 (394)
Q Consensus       133 v~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL-----------------  195 (394)
                      +..+++.++|+++..+++.+...+....+...++.++|+|||++|+|||||+.+.++++++||                 
T Consensus        82 v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~i~~ALaaGN~Vi~Kps~~~p~~  161 (454)
T cd07118          82 IEGAADLWRYAASLARTLHGDSYNNLGDDMLGLVLREPIGVVGIITPWNFPFLILSQKLPFALAAGCTVVVKPSEFTSGT  161 (454)
T ss_pred             HHHHHHHHHHHHHHHHHhcCcccccCCCCceeeEEeecceEEEEECCCCcHHHHHHHHHHHHHhcCCEEEEECCCCCcHH
Confidence            999999999999887776654433222334557789999999999999999999999999999                 


Q ss_pred             ------------------------------------------------hHHHHHh----hhhhhccccCCCCeEEEecCC
Q psy3652         196 ------------------------------------------------VGVAVQS----RFGKLLLELGGNNAIIVNEDA  223 (394)
Q Consensus       196 ------------------------------------------------~g~~i~~----~~~~~~lElgGk~p~iV~~dA  223 (394)
                                                                      +|+.|++    +++|+++|+|||||+||++||
T Consensus       162 ~~~l~~~~~~aG~P~g~~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~n~~iV~~dA  241 (454)
T cd07118         162 TLMLAELLIEAGLPAGVVNIVTGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIAAAAARNLKKVSLELGGKNPQIVFADA  241 (454)
T ss_pred             HHHHHHHHHhcCCCccceEEEecCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEeccCCCCceEECCCC
Confidence                                                            6666665    568999999999999999999


Q ss_pred             CHHHHHHHHHHHhhCcCCCcccCCceEEEecc------------------------------------------------
Q psy3652         224 DLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK------------------------------------------------  255 (394)
Q Consensus       224 Dl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~------------------------------------------------  255 (394)
                      |++.|++.+++++|.|+||.|++++|||||++                                                
T Consensus       242 dl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~  321 (454)
T cd07118         242 DLDAAADAVVFGVYFNAGECCNSGSRLLVHESIADAFVAAVVARSRKVRVGDPLDPETKVGAIINEAQLAKITDYVDAGR  321 (454)
T ss_pred             CHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCcCCCCcCHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999                                                


Q ss_pred             -----------cCC-CCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHH
Q psy3652         256 -----------KID-RPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLF  323 (394)
Q Consensus       256 -----------~~~-~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~~gLsa~v~t~d~~~a~  323 (394)
                                 ..+ ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++
T Consensus       322 ~~ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~~~~  401 (454)
T cd07118         322 AEGATLLLGGERLASAAGLFYQPTIFTDVTPDMAIAREEIFGPVLSVLTFDTVDEAIALANDTVYGLSAGVWSKDIDTAL  401 (454)
T ss_pred             hCCCEEEeCCCCCCCCCCeEEeCEEEeCCCCCCHHHhCCCCCceEEEEEECCHHHHHHHHhCCCccceEEEECCCHHHHH
Confidence                       000 24789999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEE
Q psy3652         324 KWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVT  378 (394)
Q Consensus       324 ~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~  378 (394)
                      +++  .++++|.|+||+... ..+.+||||+|.||+|+++|++++++|++.|+++
T Consensus       402 ~~~--~~l~~g~v~iN~~~~-~~~~~PfgG~~~SG~G~~~g~~~l~~~t~~k~~~  453 (454)
T cd07118         402 TVA--RRIRAGTVWVNTFLD-GSPELPFGGFKQSGIGRELGRYGVEEYTELKTVH  453 (454)
T ss_pred             HHH--HhcCcCEEEECCCCC-CCCCCCcCCcccccCCcCchHHHHHHHhceeEEe
Confidence            999  889999999998654 5567899999999999999999999999999885

Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase.

>cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins

Probab=100.00  E-value=8.9e-69  Score=543.67  Aligned_cols=322  Identities=29%  Similarity=0.464  Sum_probs=295.1

Q ss_pred             eecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhh-cCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCChHHhH-H
Q psy3652          54 SINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWA-ALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGI-G  131 (394)
Q Consensus        54 v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~-~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~  131 (394)
                      ++||+||+++++++.++.+|+++++++|++||+.|+ ++|.++|.++|++++++|++++++|++++++|+|||..++. .
T Consensus         1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~w~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~   80 (459)
T cd07089           1 VINPATEEVIGTAPDAGAADVDAAIAAARRAFDTGDWSTDAEERARCLRQLHEALEARKEELRALLVAEVGAPVMTARAM   80 (459)
T ss_pred             CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHH
Confidence            479999999999999999999999999999999999 99999999999999999999999999999999999998775 5


Q ss_pred             HHHHHHHHHHHHHHhhhhccCccc-CCC---CCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh------------
Q psy3652         132 EVQEFIDICDYAVGLSRTYSGSIL-PSE---RPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL------------  195 (394)
Q Consensus       132 ev~~~~~~l~~~a~~~~~~~~~~~-~~~---~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL------------  195 (394)
                      |+..+++.++|+++.++++.+... +..   ..+...+++++|+|||++|+|||||+.+.++++++||            
T Consensus        81 ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKps~  160 (459)
T cd07089          81 QVDGPIGHLRYFADLADSFPWEFDLPVPALRGGPGRRVVRREPVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKPAP  160 (459)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCceecCcccccCCCceeEEEEeeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCC
Confidence            999999999999998887655432 221   1244567899999999999999999999999999998            


Q ss_pred             -----------------------------------------------------hHHHHHh----hhhhhccccCCCCeEE
Q psy3652         196 -----------------------------------------------------VGVAVQS----RFGKLLLELGGNNAII  218 (394)
Q Consensus       196 -----------------------------------------------------~g~~i~~----~~~~~~lElgGk~p~i  218 (394)
                                                                           +|+.|++    ++||+++|+|||||+|
T Consensus       161 ~~p~~~~~l~~~~~~aglP~g~~~~v~g~~~~~~~~l~~~~~~~~v~ftGs~~~g~~v~~~aa~~~~~~~lelgG~n~~i  240 (459)
T cd07089         161 DTPLSALLLGEIIAETDLPAGVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGRRIMAQAAATLKRVLLELGGKSANI  240 (459)
T ss_pred             CChHHHHHHHHHHHHcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEECCCCCeeE
Confidence                                                                 6777765    4579999999999999


Q ss_pred             EecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc-------------------------------------------
Q psy3652         219 VNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK-------------------------------------------  255 (394)
Q Consensus       219 V~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~-------------------------------------------  255 (394)
                      |++|||++.|++.+++++|.|+||.|++++|||||++                                           
T Consensus       241 V~~dadl~~aa~~i~~~~~~~sGQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~i~~~~~~~v~~~  320 (459)
T cd07089         241 VLDDADLAAAAPAAVGVCMHNAGQGCALTTRLLVPRSRYDEVVEALAAAFEALPVGDPADPGTVMGPLISAAQRDRVEGY  320 (459)
T ss_pred             ECCCCCHHHHHHHHHHHHHHhcCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHHHHH
Confidence            9999999999999999999999999999999999999                                           


Q ss_pred             ----------c-----CC---CCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcCCCCcEEEEEcC
Q psy3652         256 ----------K-----ID---RPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTK  317 (394)
Q Consensus       256 ----------~-----~~---~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~~gLsa~v~t~  317 (394)
                                .     ..   ..|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+
T Consensus       321 i~~a~~~Ga~~l~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~  400 (459)
T cd07089         321 IARGRDEGARLVTGGGRPAGLDKGFYVEPTLFADVDNDMRIAQEEIFGPVLVVIPYDDDDEAVRIANDSDYGLSGGVWSA  400 (459)
T ss_pred             HHHHHHCCCEEEeCCCcCCCCCCCeEECCEEEEcCCCCCHHHhCCCcCceEEEeccCCHHHHHHHHhCCCCCCeEEEEcC
Confidence                      0     01   15889999999999999999999999999999999999999999999999999999999


Q ss_pred             CHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEE
Q psy3652         318 DVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVT  378 (394)
Q Consensus       318 d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~  378 (394)
                      |.+.+++++  .++++|.|+||... ...+..||||+|.||+|+++|.+++++|++.|++.
T Consensus       401 d~~~~~~~~--~~~~~G~v~iN~~~-~~~~~~PfgG~k~SG~G~~~g~~~l~~ft~~k~v~  458 (459)
T cd07089         401 DVDRAYRVA--RRIRTGSVGINGGG-GYGPDAPFGGYKQSGLGRENGIEGLEEFLETKSIA  458 (459)
T ss_pred             CHHHHHHHH--HhcCcCeEEECCCC-CCCCCCCcCCcccccCCCCchHHHHHHhhceeEEe
Confidence            999999999  88999999999865 45667899999999999999999999999999885

The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD.

>cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like

Probab=100.00  E-value=1.6e-68  Score=542.06  Aligned_cols=322  Identities=29%  Similarity=0.521  Sum_probs=295.1

Q ss_pred             eecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCChHHhHHHH
Q psy3652          54 SINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEV  133 (394)
Q Consensus        54 v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev  133 (394)
                      ++||+||+++++++.++.+|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..++..|+
T Consensus         1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev   80 (456)
T cd07110           1 VINPATEATIGEIPAATAEDVDAAVRAARRAFPRWKKTTGAERAKYLRAIAEGVRERREELAELEARDNGKPLDEAAWDV   80 (456)
T ss_pred             CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHH
Confidence            47999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhhhccC---cccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh---------------
Q psy3652         134 QEFIDICDYAVGLSRTYSG---SILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL---------------  195 (394)
Q Consensus       134 ~~~~~~l~~~a~~~~~~~~---~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL---------------  195 (394)
                      ..+++.++|+++.++.+.+   ...+...++...++.++|+|||++|+|||||+.+.++++++||               
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p  160 (456)
T cd07110          81 DDVAGCFEYYADLAEQLDAKAERAVPLPSEDFKARVRREPVGVVGLITPWNFPLLMAAWKVAPALAAGCTVVLKPSELTS  160 (456)
T ss_pred             HHHHHHHHHHHHHHHHhhccCCccccCCCCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEECcccch
Confidence            9999999999998877632   2222222345567889999999999999999999999999999               


Q ss_pred             --------------------------------------------------hHHHHHh----hhhhhccccCCCCeEEEec
Q psy3652         196 --------------------------------------------------VGVAVQS----RFGKLLLELGGNNAIIVNE  221 (394)
Q Consensus       196 --------------------------------------------------~g~~i~~----~~~~~~lElgGk~p~iV~~  221 (394)
                                                                        +|+.|++    +++|+++|+|||||+||++
T Consensus       161 ~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~aa~~~~~~~lElgG~~~~iV~~  240 (456)
T cd07110         161 LTELELAEIAAEAGLPPGVLNVVTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVMQAAAQDIKPVSLELGGKSPIIVFD  240 (456)
T ss_pred             HHHHHHHHHHHHcCCCCCcEEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCeEEEEcCCCCeeEECC
Confidence                                                              6677764    4579999999999999999


Q ss_pred             CCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc----------------------------------------------
Q psy3652         222 DADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK----------------------------------------------  255 (394)
Q Consensus       222 dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~----------------------------------------------  255 (394)
                      |||++.|++.+++++|.|+||.|++++|||||++                                              
T Consensus       241 dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~~~~~v~~  320 (456)
T cd07110         241 DADLEKAVEWAMFGCFWNNGQICSATSRLLVHESIADAFLERLATAAEAIRVGDPLEEGVRLGPLVSQAQYEKVLSFIAR  320 (456)
T ss_pred             CCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999                                              


Q ss_pred             -------c-----CC---CCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcCCCCcEEEEEcCCHH
Q psy3652         256 -------K-----ID---RPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVT  320 (394)
Q Consensus       256 -------~-----~~---~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~~gLsa~v~t~d~~  320 (394)
                             .     ..   ..|+|+.|||+.+++++|+++++|+||||++|++|+|.||||+++|+++|||+++|||+|.+
T Consensus       321 a~~~Ga~~~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~  400 (456)
T cd07110         321 GKEEGARLLCGGRRPAHLEKGYFIAPTVFADVPTDSRIWREEIFGPVLCVRSFATEDEAIALANDSEYGLAAAVISRDAE  400 (456)
T ss_pred             HHhCCCEEEeCCCcccccCCCCcCCCEEEecCCCCChHhhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEECCCHH
Confidence                   0     00   24789999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEE
Q psy3652         321 NLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVT  378 (394)
Q Consensus       321 ~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~  378 (394)
                      .+.+++  .++++|+|+||.++ ...+.+||||+|.||+|+++|++++++|++.|+++
T Consensus       401 ~~~~~~--~~l~~G~v~iN~~~-~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~i~  455 (456)
T cd07110         401 RCDRVA--EALEAGIVWINCSQ-PCFPQAPWGGYKRSGIGRELGEWGLDNYLEVKQIT  455 (456)
T ss_pred             HHHHHH--HhCCcceEEECCCC-CCCCCCCCCCcccccCCccchHHHHHHhcceeEEe
Confidence            999999  88999999999864 34567899999999999999999999999999885

Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine.

>PF00171 Aldedh: Aldehyde dehydrogenase family; InterPro: IPR015590 Aldehyde dehydrogenases (1

Probab=100.00  E-value=7e-70  Score=552.83  Aligned_cols=330  Identities=36%  Similarity=0.650  Sum_probs=302.6

Q ss_pred             ec-cCCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcC
Q psy3652          45 WK-ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMG  123 (394)
Q Consensus        45 ~~-~~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~G  123 (394)
                      |+ +++++++++||.||+++++++.++.+|+++|+++|++||+.|+.+|..+|.++|+++++.|+++.++|++++++|+|
T Consensus         1 w~~~~~~~~~v~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~G   80 (462)
T PF00171_consen    1 WVSSESETFDVINPATGEVIGEVPSATAEDVDRAVEAARAAFKEWSKLPAAERARILERFADLLEERRDELAELIALETG   80 (462)
T ss_dssp             EEE-TSSEEEEEETTTECEEEEEEEBSHHHHHHHHHHHHHHHHHHTTSSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHT
T ss_pred             CcCCCCCEEcCCCCCCcCEEEEEcCCCHHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHhhcccccccccccccc
Confidence            65 44578999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CChHHhHHHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh--------
Q psy3652         124 KILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL--------  195 (394)
Q Consensus       124 k~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL--------  195 (394)
                      ||..+++.|+..+++.++|+++.++.+.++..+. ..+...++.++|+|||++|+|||||+.+.++++++||        
T Consensus        81 k~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VVl  159 (462)
T PF00171_consen   81 KPIAEARGEVDRAIDFLRYYADAARKLAGEVLPS-DPGSRNYTRREPLGVVLIITPWNFPLYLAVWKIAPALAAGNTVVL  159 (462)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHHHHHHTEEEEEE-STTEEEEEEEEE-SEEEEEE-SSSCTHHHHHHHHHHHHTT-EEEE
T ss_pred             cccccccchhhhhhhhhhhhhhcccceehhhccc-ccccccccccccccceeecccccccccccccchhhhhccccccee
Confidence            9999999999999999999999998877765554 3567788999999999999999999999999999999        


Q ss_pred             ---------------------------------------------------------hHHHHHh----hhhhhccccCCC
Q psy3652         196 ---------------------------------------------------------VGVAVQS----RFGKLLLELGGN  214 (394)
Q Consensus       196 ---------------------------------------------------------~g~~i~~----~~~~~~lElgGk  214 (394)
                                                                               +|++|++    +++|+++|+|||
T Consensus       160 kps~~~~~~~~~l~~~~~~AglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~v~lelgG~  239 (462)
T PF00171_consen  160 KPSEQAPLTALLLAELLEEAGLPPGVVNVVPGDGSEVGEALVSHPDVDLVSFTGSTATGRAIAKAAAKNLKPVVLELGGK  239 (462)
T ss_dssp             EEBTTSHHHHHHHHHHHHHHTSTTTSEEEECSSTHHHHHHHHHTTTEEEEEEESEHHHHHHHHHHHHTTTSEEEEEECEE
T ss_pred             eeccccccccccchhhccccccccccccccccccccccceeeeccccceeeecchhhhhhhhhhhccccccccccccccc
Confidence                                                                     6677765    457999999999


Q ss_pred             CeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc---------------------------------------
Q psy3652         215 NAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK---------------------------------------  255 (394)
Q Consensus       215 ~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~---------------------------------------  255 (394)
                      ||+||++|||+|.|++.+++++|.|+||.|+++++||||++                                       
T Consensus       240 ~p~iV~~daDld~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~~gpl~~~~~~~~  319 (462)
T PF00171_consen  240 NPVIVDPDADLDKAAEAIVRGAFFNSGQSCTAPSRVLVHESIYDEFVEALKERVAKLRVGDPLDESTDVGPLISKAQRER  319 (462)
T ss_dssp             EEEEE-TTSHHHHHHHHHHHHHHGGGGTSTTSEEEEEEEHHHHHHHHHHHHHHHHTSEBSSTTSTTCSBCHCSSHHHHHH
T ss_pred             ceeeEecccccccccccccchhcccccccccccccccccccccchhhhhhhhccccccccCCccccccccccccchhhhh
Confidence            99999999999999999999999999999999999999999                                       


Q ss_pred             ------------------c-----CCCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcCCCCcEE
Q psy3652         256 ------------------K-----IDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSS  312 (394)
Q Consensus       256 ------------------~-----~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~~gLsa  312 (394)
                                        .     ....|+|++|||+.+++++|+++++|+||||++|++|+|+||||+++|+++|||++
T Consensus       320 ~~~~i~~a~~~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a  399 (462)
T PF00171_consen  320 VKALIEDAVAEGAKVLCGGEPQEADPENGFFIPPTVLEDVPPDMPIMQEEIFGPVLPVVPYDDLDEAIALANDSEYGLTA  399 (462)
T ss_dssp             HHHHHHHHHHTTSEEEEETSSSSBCSSSSTEEEEEEEESEHTTSHHHHSC-SSSEEEEEEESSHHHHHHHHHHSSEESEE
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccceecccccchhhhhcccccCCCcee
Confidence                              1     13568999999999999999999999999999999999999999999999999999


Q ss_pred             EEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEE
Q psy3652         313 SIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTV  377 (394)
Q Consensus       313 ~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v  377 (394)
                      +|||+|...+++++  .++++|+|+||.++......+||||+|.||+|+++|.+++++|++.|+|
T Consensus       400 ~v~s~d~~~~~~~~--~~l~~g~v~iN~~~~~~~~~~pfgG~~~SG~G~~~g~~~l~~~~~~k~V  462 (462)
T PF00171_consen  400 SVFSRDESRAERLA--RRLEAGRVWINDPPTGDPDGLPFGGFKQSGIGREGGPEGLDEFTQIKTV  462 (462)
T ss_dssp             EEECSBHHHHHHHH--HHSTSSEEEESSSSTGGTTSSEBE-SGGGEESEBSHHHHHHGTEEEEEE
T ss_pred             EEeccccccccccc--ccccccceeecCCcccccccCCCCCcccccCCcchHHHHHHHhCCccCC
Confidence            99999999999999  8899999999998655544479999999999999999999999999986

2.1.3 from EC and 1.2.1.5 from EC) are enzymes that oxidize a wide variety of aliphatic and aromatic aldehydes using NADP as a cofactor. In mammals at least four different forms of the enzyme are known []: class-1 (or Ald C) a tetrameric cytosolic enzyme, class-2 (or Ald M) a tetrameric mitochondrial enzyme, class- 3 (or Ald D) a dimeric cytosolic enzyme, and class IV a microsomal enzyme. Aldehyde dehydrogenases have also been sequenced from fungal and bacterial species. A number of enzymes are known to be evolutionary related to aldehyde dehydrogenases. A glutamic acid and a cysteine residue have been implicated in the catalytic activity of mammalian aldehyde dehydrogenase. These residues are conserved in all the enzymes of this entry. Some of the proteins in this entry are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Alt a 10 and Cla h 3.; GO: 0016491 oxidoreductase activity, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 3R31_A 3HAZ_A 1UXQ_A 1UXP_A 1UXR_A 1UXU_A 1UXN_A 1KY8_A 1UXT_A 1UXV_A ....

>cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp

Probab=100.00  E-value=3.7e-68  Score=539.15  Aligned_cols=322  Identities=29%  Similarity=0.431  Sum_probs=295.5

Q ss_pred             ecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCChHHhHHHHH
Q psy3652          55 INPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQ  134 (394)
Q Consensus        55 ~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~  134 (394)
                      +||+||+++++++.++.+|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++.|+.
T Consensus         1 ~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~ev~   80 (452)
T cd07102           1 ISPIDGSVIAERPLASLEAVRAALERARAAQKGWRAVPLEERKAIVTRAVELLAANTDEIAEELTWQMGRPIAQAGGEIR   80 (452)
T ss_pred             CCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHHHHHHH
Confidence            48999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh-------------------
Q psy3652         135 EFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL-------------------  195 (394)
Q Consensus       135 ~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL-------------------  195 (394)
                      .+++.++++++.++++.+........+...+.+++|+|||++|+|||||+.+.++++++||                   
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~  160 (452)
T cd07102          81 GMLERARYMISIAEEALADIRVPEKDGFERYIRREPLGVVLIIAPWNYPYLTAVNAVIPALLAGNAVILKHSPQTPLCGE  160 (452)
T ss_pred             HHHHHHHHHHHHHHHhcCCcccCCCCCeeEEEEEEeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHH
Confidence            9999999999988776544322222344567789999999999999999999999999999                   


Q ss_pred             ---------------------------------------------hHHHHHh----hhhhhccccCCCCeEEEecCCCHH
Q psy3652         196 ---------------------------------------------VGVAVQS----RFGKLLLELGGNNAIIVNEDADLN  226 (394)
Q Consensus       196 ---------------------------------------------~g~~i~~----~~~~~~lElgGk~p~iV~~dADl~  226 (394)
                                                                   +|+.|++    .++|+++|||||||+||++|||++
T Consensus       161 ~l~~~l~~aGlP~g~~~~v~g~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~~~~~~v~lelgG~~~~iV~~dADl~  240 (452)
T cd07102         161 RFAAAFAEAGLPEGVFQVLHLSHETSAALIADPRIDHVSFTGSVAGGRAIQRAAAGRFIKVGLELGGKDPAYVRPDADLD  240 (452)
T ss_pred             HHHHHHHhcCCCcCcEEEEeCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEECCCCCceEEcCCCCHH
Confidence                                                         6677765    457899999999999999999999


Q ss_pred             HHHHHHHHHhhCcCCCcccCCceEEEecc---------------------------------------------------
Q psy3652         227 LAQQCLVFACCGTAGQRCTTTRRLFLHKK---------------------------------------------------  255 (394)
Q Consensus       227 ~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~---------------------------------------------------  255 (394)
                      .|++.+++++|.|+||.|++++|||||++                                                   
T Consensus       241 ~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~l~vg~p~~~~~~~gpli~~~~~~~i~~~i~~a~~~g  320 (452)
T cd07102         241 AAAESLVDGAFFNSGQSCCSIERIYVHESIYDAFVEAFVAVVKGYKLGDPLDPSTTLGPVVSARAADFVRAQIADAIAKG  320 (452)
T ss_pred             HHHHHHHHHHHHhCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCC
Confidence            99999999999999999999999999999                                                   


Q ss_pred             --------cC---CCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHH
Q psy3652         256 --------KI---DRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFK  324 (394)
Q Consensus       256 --------~~---~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~~gLsa~v~t~d~~~a~~  324 (394)
                              ..   +..|+|+.|||+.+++++|+++++|+||||++|++|+|+||||+++|+++|||+++|||+|.+++.+
T Consensus       321 a~vl~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~  400 (452)
T cd07102         321 ARALIDGALFPEDKAGGAYLAPTVLTNVDHSMRVMREETFGPVVGIMKVKSDAEAIALMNDSEYGLTASVWTKDIARAEA  400 (452)
T ss_pred             CEEEeCCCCCCCCCCCCceEcCEEEecCCCCChhhhcCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHH
Confidence                    00   1248899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEE
Q psy3652         325 WLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTI  379 (394)
Q Consensus       325 ~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~  379 (394)
                      ++  .++++|.|+||++. ...+..||||+|.||+|+++|.+++++|++.|++++
T Consensus       401 ~~--~~l~~G~v~iN~~~-~~~~~~pfgG~k~SG~G~~~g~~~~~~~~~~k~~~~  452 (452)
T cd07102         401 LG--EQLETGTVFMNRCD-YLDPALAWTGVKDSGRGVTLSRLGYDQLTRPKSYHL  452 (452)
T ss_pred             HH--HHcCcceEEECCCC-CCCCCCCCCCccccccCccchHHHHHHHhceeEEeC
Confidence            99  88999999999864 455678999999999999999999999999999853

PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD.

>TIGR01238 D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain)

Probab=100.00  E-value=2.9e-68  Score=542.93  Aligned_cols=325  Identities=28%  Similarity=0.422  Sum_probs=295.9

Q ss_pred             CCCceeCCeeccCCCeeeeecCCCC-CeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHH
Q psy3652          36 NPGVYDGTSWKANGEIIPSINPSTG-ETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPL  114 (394)
Q Consensus        36 ~~~~~i~G~~~~~~~~~~v~nP~tg-~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l  114 (394)
                      ...+||||+|+.++.+++++||+|+ +++++++.++.+|+++|+++|++||+.|+.+|..+|.++|+++++.|++++++|
T Consensus        37 ~~~~~i~g~~~~~~~~~~~~nP~t~~e~i~~~~~~~~~dv~~av~~A~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~el  116 (500)
T TIGR01238        37 QAAPIIGHSYKADGEAQPVTNPADRRDIVGQVFHANLAHVQAAIDSAQQAFPTWNATPAKERAAKLDRLADLLELHMPEL  116 (500)
T ss_pred             ecCceECCEEecCCCeEEeeCCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHH
Confidence            4578999999867788999999996 899999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHH
Q psy3652         115 GQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIA  194 (394)
Q Consensus       115 ~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~a  194 (394)
                      ++++++|+|||..++..|+..+++.++++++..+...+.            ..++|+|||++|+|||||+.+.++++++|
T Consensus       117 a~~~~~e~Gk~~~~a~~ev~~~i~~l~~~a~~~~~~~~~------------~~~~P~GVV~~I~pwN~P~~~~~~~i~~A  184 (500)
T TIGR01238       117 MALCVREAGKTIHNAIAEVREAVDFCRYYAKQVRDVLGE------------FSVESRGVFVCISPWNFPLAIFTGQISAA  184 (500)
T ss_pred             HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCc------------eeccCcceEEEECCCchHHHHHHHHHHHH
Confidence            999999999999999999999999999999887554221            25899999999999999999999999999


Q ss_pred             h-----------------------------------------------------------------hHHHHHh----hh-
Q psy3652         195 L-----------------------------------------------------------------VGVAVQS----RF-  204 (394)
Q Consensus       195 L-----------------------------------------------------------------~g~~i~~----~~-  204 (394)
                      |                                                                 +|+.|++    +. 
T Consensus       185 LaaGN~VVlKps~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~v~~~aa~~~~  264 (500)
T TIGR01238       185 LAAGNTVIAKPAEQTSLIAYRAVELMQEAGFPAGTIQLLPGRGADVGAALTSDPRIAGVAFTGSTEVAQLINQTLAQRED  264 (500)
T ss_pred             HHcCCEEEEeCCCCccHHHHHHHHHHHHcCCCCCceEEEecCcchHHHHHhcCCCcCeEEEECCHHHHHHHHHHHhhccc
Confidence            9                                                                 6677664    23 


Q ss_pred             --hhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc---------------------------
Q psy3652         205 --GKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK---------------------------  255 (394)
Q Consensus       205 --~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~---------------------------  255 (394)
                        +|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++                           
T Consensus       265 ~~~~v~lElGGknp~IV~~dAdld~Aa~~i~~~~f~nsGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~vG~p~~~~~~  344 (500)
T TIGR01238       265 APVPLIAETGGQNAMIVDSTALPEQVVRDVLRSAFDSAGQRCSALRVLCVQEDVADRVLTMIQGAMQELKVGVPHLLTTD  344 (500)
T ss_pred             CCceEEEecCCcCcEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceeEEcHhhHHHHHHHHHHHHHhCCCCCCCCCCCC
Confidence              589999999999999999999999999999999999999999999999999                           


Q ss_pred             --------------------------c----CC-----CCCceecCeEEEcCCCCCcccccccccceEEEEeeC--CHHH
Q psy3652         256 --------------------------K----ID-----RPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFD--SLDE  298 (394)
Q Consensus       256 --------------------------~----~~-----~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~--~~~e  298 (394)
                                                .    ..     ..|+|++|||+.+  ++|.+++||+||||++|++|+  ++||
T Consensus       345 ~Gpli~~~~~~~~~~~i~~a~~~Ga~l~~~~~~~~~~~~~g~f~~PTvl~~--~~~~~~~eE~FgPvl~v~~~~~~~~de  422 (500)
T TIGR01238       345 VGPVIDAEAKQNLLAHIEHMSQTQKKIAQLTLDDSRACQHGTFVAPTLFEL--DDIAELSEEVFGPVLHVVRYKARELDQ  422 (500)
T ss_pred             cCCCCCHHHHHHHHHHHHHHHHcCCEEEeeccCCCCCCCCCeeEcCEEEcc--CCchHhhCCCcCCEEEEEEeCCCCHHH
Confidence                                      0    01     1488999999963  688999999999999999998  7999


Q ss_pred             HHHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCC-CCCCCccCCCCCCCC-CCchHHHHHhhhheeE
Q psy3652         299 AITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGA-EIGGAFGGEKYTGGG-RESGSDSWKQYCRRST  376 (394)
Q Consensus       299 Ai~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~-~~~~pfGG~~~SG~G-~~~g~~~l~~f~~~k~  376 (394)
                      ||+++|+++|||+++|||+|.+.+.+++  .++++|.|+||...... .+.+||||+|.||+| +.+|.+++++|++.|+
T Consensus       423 ai~~~N~~~~gLs~~vfT~d~~~~~~~~--~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~gg~~~~~~~~~~k~  500 (500)
T TIGR01238       423 IVDQINQTGYGLTMGVHSRIETTYRWIE--KHARVGNCYVNRNQVGAVVGVQPFGGQGLSGTGPKAGGPHYLYRLTQVQY  500 (500)
T ss_pred             HHHHHhCCCCCCeEEEEeCCHHHHHHHH--HhCCcceEEECCCCCCCCCCCCCCCccccccCCCccCCHHHHHHHHhhcC
Confidence            9999999999999999999999999999  88999999999865333 245799999999999 8999999999999873

This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase.

>cd07115 ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like

Probab=100.00  E-value=4.6e-68  Score=538.29  Aligned_cols=322  Identities=32%  Similarity=0.544  Sum_probs=296.7

Q ss_pred             ecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCChHHhH-HHH
Q psy3652          55 INPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGI-GEV  133 (394)
Q Consensus        55 ~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev  133 (394)
                      +||+||+++++++.++.+++++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..++. .|+
T Consensus         2 ~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ev   81 (453)
T cd07115           2 LNPATGELIARVAQASAEDVDAAVAAARAAFEAWSAMDPAERGRILWRLAELILANADELARLESLDTGKPIRAARRLDV   81 (453)
T ss_pred             CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHH
Confidence            5999999999999999999999999999999999999999999999999999999999999999999999999997 599


Q ss_pred             HHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh------------------
Q psy3652         134 QEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL------------------  195 (394)
Q Consensus       134 ~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL------------------  195 (394)
                      ..+++.+++++++.++..+...+.. .+...++.++|+|||++|+|||||+.+.++++++||                  
T Consensus        82 ~~~i~~l~~~~~~~~~~~g~~~~~~-~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~  160 (453)
T cd07115          82 PRAADTFRYYAGWADKIEGEVIPVR-GPFLNYTVREPVGVVGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELTPLSA  160 (453)
T ss_pred             HHHHHHHHHHHHHHHHhcCceecCC-CCceEEEEecceeEEEEEcCCCCHHHHHHHHHHHHHhcCCEEEEECCCCCcHHH
Confidence            9999999999998877666543322 344567889999999999999999999999999999                  


Q ss_pred             -----------------------------------------------hHHHHHh----hhhhhccccCCCCeEEEecCCC
Q psy3652         196 -----------------------------------------------VGVAVQS----RFGKLLLELGGNNAIIVNEDAD  224 (394)
Q Consensus       196 -----------------------------------------------~g~~i~~----~~~~~~lElgGk~p~iV~~dAD  224 (394)
                                                                     +|+.|++    +++|+++|||||||+||++|||
T Consensus       161 ~~l~~~~~~aGlP~~~~~~v~g~~~~~~~~l~~~~~id~v~fTGs~~~g~~v~~~aa~~~~~~~lElgG~~p~iV~~dAd  240 (453)
T cd07115         161 LRIAELMAEAGFPAGVLNVVTGFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQGAAGNLKRVSLELGGKSANIVFADAD  240 (453)
T ss_pred             HHHHHHHHhcCcCchheEEEecCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCeEEEecCCCCceEECCCCC
Confidence                                                           6777764    4678999999999999999999


Q ss_pred             HHHHHHHHHHHhhCcCCCcccCCceEEEecc-------------------------------------------------
Q psy3652         225 LNLAQQCLVFACCGTAGQRCTTTRRLFLHKK-------------------------------------------------  255 (394)
Q Consensus       225 l~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~-------------------------------------------------  255 (394)
                      ++.|++.+++++|.|+||.|++++|||||++                                                 
T Consensus       241 l~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~  320 (453)
T cd07115         241 LDAAVRAAATGIFYNQGQMCTAGSRLLVHESIYDEFLERFTSLARSLRPGDPLDPKTQMGPLVSQAQFDRVLDYVDVGRE  320 (453)
T ss_pred             HHHHHHHHHHHHHhccCCCCCCCeEEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999                                                 


Q ss_pred             -----c----C-CCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHh
Q psy3652         256 -----K----I-DRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKW  325 (394)
Q Consensus       256 -----~----~-~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~~gLsa~v~t~d~~~a~~~  325 (394)
                           .    . ...|+|++|||+.+++++|++++||+||||++|++|+|.||||+++|+++|||++||||+|.+.++++
T Consensus       321 ~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~ifs~d~~~~~~~  400 (453)
T cd07115         321 EGARLLTGGKRPGARGFFVEPTIFAAVPPEMRIAQEEIFGPVVSVMRFRDEEEALRIANGTEYGLAAGVWTRDLGRAHRV  400 (453)
T ss_pred             CCCEEEeCCCCCCCCCceECCEEEecCCCCChHhhCCCcCceEEEEeeCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHH
Confidence                 0    0 11478999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEEe
Q psy3652         326 LGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTIN  380 (394)
Q Consensus       326 ~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~~  380 (394)
                      +  .++++|.|+||..+ ...+.+||||+|.||+|+++|.+++++|++.|+++++
T Consensus       401 ~--~~l~~G~v~iN~~~-~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~~~~~  452 (453)
T cd07115         401 A--AALKAGTVWINTYN-RFDPGSPFGGYKQSGFGREMGREALDEYTEVKSVWVN  452 (453)
T ss_pred             H--HhcCccEEEECCCC-CCCCCCCCCCcccccCCcCchHHHHHHhhceEEEEEe
Confidence            9  88999999999754 4567799999999999999999999999999999775

4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD.

>cd07108 ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like

Probab=100.00  E-value=3.2e-68  Score=540.01  Aligned_cols=321  Identities=33%  Similarity=0.571  Sum_probs=293.8

Q ss_pred             eecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCCh-HHhHHH
Q psy3652          54 SINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKIL-AEGIGE  132 (394)
Q Consensus        54 v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~-~~a~~e  132 (394)
                      ++||+||+++++++.++.+|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||. .+++.|
T Consensus         1 ~~~P~t~~~~~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~a~~e   80 (457)
T cd07108           1 VINPATGQVIGEVPRSRAADVDRAVAAAKAAFPEWAATPARERGKLLARIADALEARSEELARLLALETGNALRTQARPE   80 (457)
T ss_pred             CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCcHHHHHHH
Confidence            4799999999999999999999999999999999999999999999999999999999999999999999997 688899


Q ss_pred             HHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh-----------------
Q psy3652         133 VQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL-----------------  195 (394)
Q Consensus       133 v~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL-----------------  195 (394)
                      +..+++.++++++...++.+...+.. .+...+..++|+|||++|+|||||+.+.++++++||                 
T Consensus        81 v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~  159 (457)
T cd07108          81 AAVLADLFRYFGGLAGELKGETLPFG-PDVLTYTVREPLGVVGAILPWNAPLMLAALKIAPALVAGNTVVLKAAEDAPLA  159 (457)
T ss_pred             HHHHHHHHHHHHHHHHHhCCceeccC-CCeeEEEEeecceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcHH
Confidence            99999999999988877666554432 344567789999999999999999999999999999                 


Q ss_pred             -----------------------------------------------hHHHHHh----hhhhhccccCCCCeEEEecCCC
Q psy3652         196 -----------------------------------------------VGVAVQS----RFGKLLLELGGNNAIIVNEDAD  224 (394)
Q Consensus       196 -----------------------------------------------~g~~i~~----~~~~~~lElgGk~p~iV~~dAD  224 (394)
                                                                     +|+.|++    +++|+++|+|||||+||++|||
T Consensus       160 ~~~l~~~~~~~lP~~~~~~v~g~~~~~~~~L~~~~~vd~v~ftGs~~~g~~v~~~aa~~l~~~~lelgG~~~~iV~~dAd  239 (457)
T cd07108         160 VLLLAEILAQVLPAGVLNVITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAADRLIPVSLELGGKSPMIVFPDAD  239 (457)
T ss_pred             HHHHHHHHHHhCCcCcEEEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHHhccCCeEEEECCCCCeeEECCCCC
Confidence                                                           6677665    4578999999999999999999


Q ss_pred             HHHHHHHHHHHh-hCcCCCcccCCceEEEecc------------------------------------------------
Q psy3652         225 LNLAQQCLVFAC-CGTAGQRCTTTRRLFLHKK------------------------------------------------  255 (394)
Q Consensus       225 l~~aa~~i~~~~-~~~~GQ~C~a~~rv~V~~~------------------------------------------------  255 (394)
                      ++.|++.+++++ |.|+||.|++++|||||++                                                
T Consensus       240 l~~Aa~~iv~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~a~  319 (457)
T cd07108         240 LDDAVDGAIAGMRFTRQGQSCTAGSRLFVHEDIYDAFLEKLVAKLSKLKIGDPLDEATDIGAIISEKQFAKVCGYIDLGL  319 (457)
T ss_pred             HHHHHHHHHHhhHhhcCCCCCCCCeEEEEehHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHH
Confidence            999999999995 9999999999999999999                                                


Q ss_pred             c-C---------------CCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcCCCCcEEEEEcCCH
Q psy3652         256 K-I---------------DRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDV  319 (394)
Q Consensus       256 ~-~---------------~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~~gLsa~v~t~d~  319 (394)
                      . .               ...|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.
T Consensus       320 ~~~ga~vl~gG~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLs~~vft~d~  399 (457)
T cd07108         320 STSGATVLRGGPLPGEGPLADGFFVQPTIFSGVDNEWRLAREEIFGPVLCAIPWKDEDEVIAMANDSHYGLAAYVWTRDL  399 (457)
T ss_pred             hCCCCEEEeCCCcCccCCCCCceEECCEEEecCCCCChhhhcCCCCceEEeecCCCHHHHHHHHhCCCcCceeEEEcCCH
Confidence            0 0               02378999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHH-HHhhhheeEEE
Q psy3652         320 TNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDS-WKQYCRRSTVT  378 (394)
Q Consensus       320 ~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~-l~~f~~~k~v~  378 (394)
                      +++++++  .++++|.|+||++. ...+.+||||+|.||+|+++|.++ +++|++.|+++
T Consensus       400 ~~a~~~~--~~l~~g~v~iN~~~-~~~~~~pfGG~k~SG~G~~~g~~~~~~~f~~~k~i~  456 (457)
T cd07108         400 GRALRAA--HALEAGWVQVNQGG-GQQPGQSYGGFKQSGLGREASLEGMLEHFTQKKTVN  456 (457)
T ss_pred             HHHHHHH--HhcCcceEEECCCC-CCCCCCCcCCcccCcCCCCccchhHHHHhhceEEEe
Confidence            9999999  88999999999875 345678999999999999999976 79999999885

NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD.

>PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=2.1e-68  Score=561.62  Aligned_cols=340  Identities=26%  Similarity=0.302  Sum_probs=300.1

Q ss_pred             CCCceeCCeecc-CCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHH-HHHhhcCChhhHHHHHHHHHHHHhhCHHH
Q psy3652          36 NPGVYDGTSWKA-NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAA-YAAWAALPAPRRGEIVRQIGDALRHKLVP  113 (394)
Q Consensus        36 ~~~~~i~G~~~~-~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A-~~~w~~~~~~~R~~~L~~~a~~l~~~~~~  113 (394)
                      +.++||||+|+. ++.+++++||+||+++++++.++ +|+++||++|++| |+.|+++|+.+|+++|++++++|++++++
T Consensus         4 ~~~~~i~G~~~~~~~~~~~~~nP~tg~~i~~~~~~~-~dv~~Av~~A~~A~~~~W~~~~~~eR~~~L~~~a~~l~~~~~e   82 (675)
T PRK11563          4 KLQSYVAGRWQTGQGEGRPLHDAVTGEPVARVSSEG-LDFAAALAYAREVGGPALRALTFHERAAMLKALAKYLLERKEE   82 (675)
T ss_pred             cccceecCEEEcCCCCceeccCCCCCCEEEEEcCCc-HHHHHHHHHHHHhhhhhhhcCCHHHHHHHHHHHHHHHHHhHHH
Confidence            456899999974 56779999999999999999998 6999999999998 79999999999999999999999999999


Q ss_pred             HHHHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhcc--------CcccCCCCCC-ceeEeeeccc-eeEEEEccCCch
Q psy3652         114 LGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYS--------GSILPSERPG-HVLLENWNPL-GVVGIISAFNFP  183 (394)
Q Consensus       114 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~--------~~~~~~~~~~-~~~~~~~~P~-GVV~~I~p~N~P  183 (394)
                      |++ +++|+|||..+++.|+..+++.++|+++.+++..        ++..+...++ ...+..++|+ |||++|+|||||
T Consensus        83 la~-l~~e~GK~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~GVv~~I~PwNfP  161 (675)
T PRK11563         83 LYA-LSAQTGATRRDSWIDIEGGIGTLFTYASKGRRELPNDTVLVEGEVEPLSKGGTFAGRHILTPLEGVAVHINAFNFP  161 (675)
T ss_pred             HHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhhccccccccCCccccccCCCcccceEEEeecCceEEEECCCchH
Confidence            999 5999999999999999999999999998875532        3332221112 2246778997 999999999999


Q ss_pred             hHhHHHHHHHHh---------------------------------------------------------------hHHHH
Q psy3652         184 VAVYGWNAAIAL---------------------------------------------------------------VGVAV  200 (394)
Q Consensus       184 ~~~~~~~~~~aL---------------------------------------------------------------~g~~i  200 (394)
                      +.+.++++++||                                                               +|++|
T Consensus       162 ~~~~~~~i~pALaaGN~VV~KPse~tp~~a~~l~~~~~eaG~~P~gv~~vv~g~~~~~~~~~~~i~~v~FTGS~~~G~~i  241 (675)
T PRK11563        162 VWGMLEKLAPAFLAGVPAIVKPATATAYLTEAVVRLIVESGLLPEGALQLICGSAGDLLDHLDGQDVVTFTGSAATAQKL  241 (675)
T ss_pred             HHHHHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHHHHcCCCCCCcEEEeeCCHHHHhhcCCCCCEEEEECcHHHHHHH
Confidence            999999999999                                                               67777


Q ss_pred             Hh------hhhhhccccCCCCeEEEecCCC-----HHHHHHHHHHHhhCcCCCcccCCceEEEecc--------------
Q psy3652         201 QS------RFGKLLLELGGNNAIIVNEDAD-----LNLAQQCLVFACCGTAGQRCTTTRRLFLHKK--------------  255 (394)
Q Consensus       201 ~~------~~~~~~lElgGk~p~iV~~dAD-----l~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~--------------  255 (394)
                      ++      +++|+++|||||||+||++|||     +|.|++.+++++|.|+||.|++++|+|||++              
T Consensus       242 ~~~~~a~~~~~~~~lELGGknp~IV~~DAd~~~~dld~aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~  321 (675)
T PRK11563        242 RAHPNVVANSVPFTAEADSLNAAILGPDATPGTPEFDLFVKEVVREMTVKAGQKCTAIRRAIVPRALVDAVIEALRARLA  321 (675)
T ss_pred             HhhhhhhhCCceEEEecCCcCceEECCCCCcCchhHHHHHHHHHHHHHHhCCCccccceeEEeeHHHHHHHHHHHHHHHh
Confidence            64      3679999999999999999995     9999999999999999999999999999999              


Q ss_pred             ------------------------------------------c-CC--------CCCceecCeEEEcCCC--CCcccccc
Q psy3652         256 ------------------------------------------K-ID--------RPGYFVEPTIVTGLPH--NSRVVHRE  282 (394)
Q Consensus       256 ------------------------------------------~-~~--------~~g~~~~Ptvl~~v~~--~~~i~~eE  282 (394)
                                                                . ..        ..|+|++|||+.++++  ++++++||
T Consensus       322 ~l~vG~p~d~~t~~GPli~~~~~~~i~~~i~~a~~~a~vl~Gg~~~~~~~~~~~~~g~f~~PTvl~~v~~~~~~~i~~eE  401 (675)
T PRK11563        322 KVVVGDPRLEGVRMGALASLEQREDVREKVAALLAAAEIVFGGPDSFEVVGADAEKGAFFPPTLLYCDDPLEAPAVHDVE  401 (675)
T ss_pred             cCccCCCCCCCCcccCCcCHHHHHHHHHHHHHHHhCCEEEECCcccccccCCCCCCCeeECCEEEeccCchhhhhHhhcc
Confidence                                                      0 00        1488999999999998  57999999


Q ss_pred             cccceEEEEeeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHhhcccccc--eeEEEEcCCC--------CCCCCCCCcc
Q psy3652         283 TFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSD--CGLINVNIPT--------NGAEIGGAFG  352 (394)
Q Consensus       283 ~FGPvl~v~~~~~~~eAi~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~--~g~V~iN~~~--------~~~~~~~pfG  352 (394)
                      +||||++|++|+|+||||+++|+++|||++||||+|..++.+++  .+++  +|.||||..+        ....+.+|||
T Consensus       402 iFGPVl~V~~~~~~~eai~~aN~s~~gL~asvft~d~~~a~~~~--~~l~~~~G~v~iN~~~~~~~~~~~~~~~~~~pfG  479 (675)
T PRK11563        402 AFGPVSTLMPYDDLDEAIELAARGKGSLVASLVTADPEVARELV--LGAAPWHGRLLVLNRESAKESTGHGSPLPQLVHG  479 (675)
T ss_pred             ccCCceEEEecCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHH--HHHHhcCCEEEEcCccccccccCCCCCCcCCCcC
Confidence            99999999999999999999999999999999999999999999  7886  9999999642        1122568999


Q ss_pred             CCCCCCCCCCc-hHHHHHhhhheeEEEE
Q psy3652         353 GEKYTGGGRES-GSDSWKQYCRRSTVTI  379 (394)
Q Consensus       353 G~~~SG~G~~~-g~~~l~~f~~~k~v~~  379 (394)
                      |+|.||+|++. |.+++++|++.|++..
T Consensus       480 G~k~SG~G~~~~g~~~~~~f~~~k~~~~  507 (675)
T PRK11563        480 GPGRAGGGEELGGLRGVKHYMQRTAVQG  507 (675)
T ss_pred             CCCCCCCCccccchhHHHHhheeeeeec
Confidence            99999999994 6999999999998865

>cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like

Probab=100.00  E-value=6e-68  Score=538.01  Aligned_cols=325  Identities=29%  Similarity=0.521  Sum_probs=298.2

Q ss_pred             CeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHH--HhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCChH
Q psy3652          50 EIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYA--AWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILA  127 (394)
Q Consensus        50 ~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~  127 (394)
                      .+++++||+||+++++++.++.+|+++++++|++||+  .|+.+|.++|.++|+++++.|++++++|++++++|+|||..
T Consensus         2 ~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~   81 (462)
T cd07112           2 ETFATINPATGRVLAEVAACDAADVDRAVAAARRAFESGVWSRLSPAERKAVLLRLADLIEAHRDELALLETLDMGKPIS   81 (462)
T ss_pred             CeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHH
Confidence            4689999999999999999999999999999999998  49999999999999999999999999999999999999999


Q ss_pred             HhHH-HHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh-----------
Q psy3652         128 EGIG-EVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL-----------  195 (394)
Q Consensus       128 ~a~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL-----------  195 (394)
                      ++.. |+..+++.++|++..++++.+...+.. .+...++.++|+|||++|+|||||+.+.++++++||           
T Consensus        82 ~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GvV~~i~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps  160 (462)
T cd07112          82 DALAVDVPSAANTFRWYAEAIDKVYGEVAPTG-PDALALITREPLGVVGAVVPWNFPLLMAAWKIAPALAAGNSVVLKPA  160 (462)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCceecCC-CCeEEEEEEeeeeeEEEECCCchHHHHHHHHHHHHHHcCCeeeeeCC
Confidence            9964 999999999999998887766543332 344567789999999999999999999999999999           


Q ss_pred             ------------------------------------------------------hHHHHHh-----hhhhhccccCCCCe
Q psy3652         196 ------------------------------------------------------VGVAVQS-----RFGKLLLELGGNNA  216 (394)
Q Consensus       196 ------------------------------------------------------~g~~i~~-----~~~~~~lElgGk~p  216 (394)
                                                                            +|+.|++     ++||+++|+|||||
T Consensus       161 ~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~~lelgG~n~  240 (462)
T cd07112         161 EQSPLTALRLAELALEAGLPAGVLNVVPGFGHTAGEALGLHMDVDALAFTGSTEVGRRFLEYSGQSNLKRVWLECGGKSP  240 (462)
T ss_pred             CCCCHHHHHHHHHHHhcCCCCCcEEEEeCCCchHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHHhcCCEEEecCCCCCe
Confidence                                                                  6776654     46789999999999


Q ss_pred             EEEecCC-CHHHHHHHHHHHhhCcCCCcccCCceEEEecc----------------------------------------
Q psy3652         217 IIVNEDA-DLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK----------------------------------------  255 (394)
Q Consensus       217 ~iV~~dA-Dl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~----------------------------------------  255 (394)
                      +||++|| |++.|++.+++++|.|+||.|++++|||||++                                        
T Consensus       241 ~iV~~da~dl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v  320 (462)
T cd07112         241 NIVFADAPDLDAAAEAAAAGIFWNQGEVCSAGSRLLVHESIKDEFLEKVVAAAREWKPGDPLDPATRMGALVSEAHFDKV  320 (462)
T ss_pred             EEECCCCcCHHHHHHHHHHHHHhccCCCCCCCeeEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHH
Confidence            9999999 99999999999999999999999999999999                                        


Q ss_pred             -------------c-C---C----CCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcCCCCcEEEE
Q psy3652         256 -------------K-I---D----RPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSI  314 (394)
Q Consensus       256 -------------~-~---~----~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~~gLsa~v  314 (394)
                                   . .   .    ..|+|+.|||+.+++++|++++||+||||++|++|+|.||||+++|+++|||+++|
T Consensus       321 ~~~v~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~i  400 (462)
T cd07112         321 LGYIESGKAEGARLVAGGKRVLTETGGFFVEPTVFDGVTPDMRIAREEIFGPVLSVITFDSEEEAVALANDSVYGLAASV  400 (462)
T ss_pred             HHHHHHHHHCCCEEEeCCccCCCCCCCeEEeeEEecCCCCCChHHhCCCCCceEEEEEeCCHHHHHHHHhCCCccceEEE
Confidence                         0 0   0    13789999999999999999999999999999999999999999999999999999


Q ss_pred             EcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEE
Q psy3652         315 FTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVT  378 (394)
Q Consensus       315 ~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~  378 (394)
                      ||+|.+.+.+++  .++++|.|+||..+ ...+.+||||+|.||+|+++|.+++++|++.|+++
T Consensus       401 ~t~d~~~~~~~~--~~l~~g~v~iN~~~-~~~~~~PfgG~k~SG~G~~~g~~~~~~f~~~k~i~  461 (462)
T cd07112         401 WTSDLSRAHRVA--RRLRAGTVWVNCFD-EGDITTPFGGFKQSGNGRDKSLHALDKYTELKTTW  461 (462)
T ss_pred             EcCCHHHHHHHH--HhcCcceEEECCCC-CCCCCCCCCCcccccCCccchHHHHHHHhceeEEE
Confidence            999999999999  88999999999864 34567899999999999999999999999999885

NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD.

>cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like

Probab=100.00  E-value=9.4e-68  Score=535.89  Aligned_cols=322  Identities=33%  Similarity=0.542  Sum_probs=294.7

Q ss_pred             eecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCChHHhH-HH
Q psy3652          54 SINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGI-GE  132 (394)
Q Consensus        54 v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~e  132 (394)
                      ++||+||+++++++.++.+|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..++. .|
T Consensus         1 ~~~P~t~~~i~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~~~~l~~~~~~l~~~~~~e~Gk~~~~~~~~e   80 (450)
T cd07092           1 VVDPATGEEIATVPDASAADVDAAVAAAHAAFPSWRRTTPAERSKALLKLADAIEENAEELAALESRNTGKPLHLVRDDE   80 (450)
T ss_pred             CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHHHHH
Confidence            47999999999999999999999999999999999999999999999999999999999999999999999998874 69


Q ss_pred             HHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh-----------------
Q psy3652         133 VQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL-----------------  195 (394)
Q Consensus       133 v~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL-----------------  195 (394)
                      +..+++.++++++..+.+.+...+...++...+.+++|+|||++|+|||||+.+.++++++||                 
T Consensus        81 v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~~~  160 (450)
T cd07092          81 LPGAVDNFRFFAGAARTLEGPAAGEYLPGHTSMIRREPIGVVAQIAPWNYPLMMAAWKIAPALAAGNTVVLKPSETTPLT  160 (450)
T ss_pred             HHHHHHHHHHHHHHHHHhcCcccCccCCCceeEEEEeccceEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCccchHH
Confidence            999999999999887776554333222344567889999999999999999999999999999                 


Q ss_pred             -----------------------------------------------hHHHHHh----hhhhhccccCCCCeEEEecCCC
Q psy3652         196 -----------------------------------------------VGVAVQS----RFGKLLLELGGNNAIIVNEDAD  224 (394)
Q Consensus       196 -----------------------------------------------~g~~i~~----~~~~~~lElgGk~p~iV~~dAD  224 (394)
                                                                     +|+.|++    +++|+++|+|||||+||++|||
T Consensus       161 ~~~l~~~~~~glP~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a~~~~~~~~lelgG~~p~iV~~dAd  240 (450)
T cd07092         161 TLLLAELAAEVLPPGVVNVVCGGGASAGDALVAHPRVRMVSLTGSVRTGKKVARAAADTLKRVHLELGGKAPVIVFDDAD  240 (450)
T ss_pred             HHHHHHHHHhcCCcccEEEeecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCcEEEECCCCCeeEECCCCC
Confidence                                                           6676765    4679999999999999999999


Q ss_pred             HHHHHHHHHHHhhCcCCCcccCCceEEEecc---------------------------------------------c---
Q psy3652         225 LNLAQQCLVFACCGTAGQRCTTTRRLFLHKK---------------------------------------------K---  256 (394)
Q Consensus       225 l~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~---------------------------------------------~---  256 (394)
                      ++.|++.+++++|.|+||.|++++|||||++                                             .   
T Consensus       241 l~~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~i~~~i~~a~~  320 (450)
T cd07092         241 LDAAVAGIATAGYYNAGQDCTAACRVYVHESVYDEFVAALVEAVSAIRVGDPDDEDTEMGPLNSAAQRERVAGFVERAPA  320 (450)
T ss_pred             HHHHHHHHHHHHHhhCCCCCCCCcEEEEeHHHHHHHHHHHHHHHhhCCcCCCCCCCCccCcccCHHHHHHHHHHHHHHHc
Confidence            9999999999999999999999999999999                                             0   


Q ss_pred             ----------CCCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHhh
Q psy3652         257 ----------IDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWL  326 (394)
Q Consensus       257 ----------~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~~gLsa~v~t~d~~~a~~~~  326 (394)
                                .+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++
T Consensus       321 ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~vft~d~~~~~~~~  400 (450)
T cd07092         321 HARVLTGGRRAEGPGYFYEPTVVAGVAQDDEIVQEEIFGPVVTVQPFDDEDEAIELANDVEYGLASSVWTRDVGRAMRLS  400 (450)
T ss_pred             CCEEEeCCCCCCCCccEEeeEEEEcCCCCChHHhCCCcCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHHHHHHH
Confidence                      0124789999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEE
Q psy3652         327 GPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVT  378 (394)
Q Consensus       327 ~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~  378 (394)
                        .++++|.|+||+... ..+.+||||+|.||+|+++|.+++++|++.|++.
T Consensus       401 --~~l~~g~v~iN~~~~-~~~~~PfgG~~~SG~G~~~g~~~~~~~~~~k~~~  449 (450)
T cd07092         401 --ARLDFGTVWVNTHIP-LAAEMPHGGFKQSGYGKDLSIYALEDYTRIKHVM  449 (450)
T ss_pred             --HhcCccEEEECCCCC-CCCCCCcCCcccCcCCCCChHHHHHHHheeeEEe
Confidence              889999999998654 4567999999999999999999999999999885

NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency.

>cd07099 ALDH_DDALDH Methylomonas sp

Probab=100.00  E-value=1.3e-67  Score=535.34  Aligned_cols=322  Identities=31%  Similarity=0.502  Sum_probs=294.9

Q ss_pred             ecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCChHHhHHHHH
Q psy3652          55 INPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQ  134 (394)
Q Consensus        55 ~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~  134 (394)
                      +||+||+++++++.++.+|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..++..|+.
T Consensus         1 ~~P~t~~~~~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~ev~   80 (453)
T cd07099           1 RNPATGEVLGEVPVTDPAEVAAAVARARAAQRAWAALGVEGRAQRLLRWKRALADHADELAELLHAETGKPRADAGLEVL   80 (453)
T ss_pred             CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence            49999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhhhccCcc-cCCC--CCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh----------------
Q psy3652         135 EFIDICDYAVGLSRTYSGSI-LPSE--RPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL----------------  195 (394)
Q Consensus       135 ~~~~~l~~~a~~~~~~~~~~-~~~~--~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL----------------  195 (394)
                      .+++.++|+++.+.++.+.. .+..  .++...+++++|+|||++|+|||||+.+.++++++||                
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~l~~ALaaGN~vilKps~~~p~  160 (453)
T cd07099          81 LALEAIDWAARNAPRVLAPRKVPTGLLMPNKKATVEYRPYGVVGVISPWNYPLLTPMGDIIPALAAGNAVVLKPSEVTPL  160 (453)
T ss_pred             HHHHHHHHHHHHHHHhcCCccccCcccCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCccchH
Confidence            99999999999887764332 2211  1345567889999999999999999999999999999                


Q ss_pred             -----------------------------------------------hHHHHHh----hhhhhccccCCCCeEEEecCCC
Q psy3652         196 -----------------------------------------------VGVAVQS----RFGKLLLELGGNNAIIVNEDAD  224 (394)
Q Consensus       196 -----------------------------------------------~g~~i~~----~~~~~~lElgGk~p~iV~~dAD  224 (394)
                                                                     +|+.|++    +++|+++|+|||||+||++|||
T Consensus       161 ~~~~l~~~l~~ag~P~g~~~vv~g~~~~~~~l~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~dad  240 (453)
T cd07099         161 VGELLAEAWAAAGPPQGVLQVVTGDGATGAALIDAGVDKVAFTGSVATGRKVMAAAAERLIPVVLELGGKDPMIVLADAD  240 (453)
T ss_pred             HHHHHHHHHHHcCCCCCeEEEEeCCchHHHHHhcCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCeEEECCCCC
Confidence                                                           6666664    4679999999999999999999


Q ss_pred             HHHHHHHHHHHhhCcCCCcccCCceEEEecc-------------------------------------------------
Q psy3652         225 LNLAQQCLVFACCGTAGQRCTTTRRLFLHKK-------------------------------------------------  255 (394)
Q Consensus       225 l~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~-------------------------------------------------  255 (394)
                      ++.|++.+++++|.|+||.|++++|||||++                                                 
T Consensus       241 l~~a~~~i~~~~~~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~G~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~  320 (453)
T cd07099         241 LERAAAAAVWGAMVNAGQTCISVERVYVHESVYDEFVARLVAKARALRPGADDIGDADIGPMTTARQLDIVRRHVDDAVA  320 (453)
T ss_pred             HHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCcccCCcCHHHHHHHHHHHHHHHh
Confidence            9999999999999999999999999999998                                                 


Q ss_pred             ----c-----CC-CCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHh
Q psy3652         256 ----K-----ID-RPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKW  325 (394)
Q Consensus       256 ----~-----~~-~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~~gLsa~v~t~d~~~a~~~  325 (394)
                          .     .. ..|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++
T Consensus       321 ~ga~~~~gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~~  400 (453)
T cd07099         321 KGAKALTGGARSNGGGPFYEPTVLTDVPHDMDVMREETFGPVLPVMPVADEDEAIALANDSRYGLSASVFSRDLARAEAI  400 (453)
T ss_pred             CCCEEEeCCCcCCCCCeEEecEEEecCCCCCHHHhCCCcCCeeEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHH
Confidence                0     00 2478999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcccccceeEEEEcCCCC-CCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEE
Q psy3652         326 LGPQGSDCGLINVNIPTN-GAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVT  378 (394)
Q Consensus       326 ~~~~~~~~g~V~iN~~~~-~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~  378 (394)
                      +  .++++|.|+||+... ...+.+||||+|.||+|+++|.+++++|++.|+++
T Consensus       401 ~--~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~g~~~g~~~~~~~t~~k~v~  452 (453)
T cd07099         401 A--RRLEAGAVSINDVLLTAGIPALPFGGVKDSGGGRRHGAEGLREFCRPKAIA  452 (453)
T ss_pred             H--HhCCeeeEEECCCCCCCCCCCCCCCCcccccCCccChHHHHHHhcceEEEe
Confidence            9  889999999998643 34567999999999999999999999999999885

4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid.

>cd07146 ALDH_PhpJ Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like

Probab=100.00  E-value=1.1e-67  Score=534.29  Aligned_cols=322  Identities=29%  Similarity=0.456  Sum_probs=291.7

Q ss_pred             eeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCChHHhHH
Q psy3652          52 IPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIG  131 (394)
Q Consensus        52 ~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~  131 (394)
                      ++++||+||+++++++.++.+++++|+++|+++   |+.+|.++|.++|+++++.|++++++|++++++|+|||..+++.
T Consensus         1 ~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~~---~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~   77 (451)
T cd07146           1 LEVRNPYTGEVVGTVPAGTEEALREALALAASY---RSTLTRYQRSAILNKAAALLEARREEFARLITLESGLCLKDTRY   77 (451)
T ss_pred             CCccCCCCCCEEEEEcCCCHHHHHHHHHHHHHH---HhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH
Confidence            367899999999999999999999999998875   98899999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhhhhccCcccCCC----CCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh------------
Q psy3652         132 EVQEFIDICDYAVGLSRTYSGSILPSE----RPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL------------  195 (394)
Q Consensus       132 ev~~~~~~l~~~a~~~~~~~~~~~~~~----~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL------------  195 (394)
                      |+..+++.++|+++....+.++..+..    ..+...++.++|+|||++|+|||||+.+.++++++||            
T Consensus        78 ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKps~  157 (451)
T cd07146          78 EVGRAADVLRFAAAEALRDDGESFSCDLTANGKARKIFTLREPLGVVLAITPFNHPLNQVAHKIAPAIAANNRIVLKPSE  157 (451)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCcccccccccCCCCceEEEEEeccceEEEEccCChHHHHHHHHHHHHHHcCCEEEEECCC
Confidence            999999999999988776655433221    1234567789999999999999999999999999999            


Q ss_pred             -----------------------------------------------------hHHHHHh--hhhhhccccCCCCeEEEe
Q psy3652         196 -----------------------------------------------------VGVAVQS--RFGKLLLELGGNNAIIVN  220 (394)
Q Consensus       196 -----------------------------------------------------~g~~i~~--~~~~~~lElgGk~p~iV~  220 (394)
                                                                           +|+.|++  ..+|+++|+|||||+||+
T Consensus       158 ~~p~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~i~~V~fTGs~~~g~~i~~~a~~~~~~lElGG~~p~iV~  237 (451)
T cd07146         158 KTPLSAIYLADLLYEAGLPPDMLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGKAIAATAGYKRQLLELGGNDPLIVM  237 (451)
T ss_pred             CchHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhcCCceeeecCCCceEEEC
Confidence                                                                 6676665  346899999999999999


Q ss_pred             cCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc---------------------------------------------
Q psy3652         221 EDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK---------------------------------------------  255 (394)
Q Consensus       221 ~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~---------------------------------------------  255 (394)
                      +|||++.|++.+++++|.|+||.|++++|||||++                                             
T Consensus       238 ~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~gpli~~~~~~~v~~~v~  317 (451)
T cd07146         238 DDADLERAATLAVAGSYANSGQRCTAVKRILVHESVADEFVDLLVEKSAALVVGDPMDPATDMGTVIDEEAAIQIENRVE  317 (451)
T ss_pred             CCCCHHHHHHHHHHHHHhhCCCCCCCCceEEEchHHHHHHHHHHHHHHhcCCCCCCCCCCCCcCCCCCHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999                                             


Q ss_pred             ---------cC--CCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHH
Q psy3652         256 ---------KI--DRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFK  324 (394)
Q Consensus       256 ---------~~--~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~~gLsa~v~t~d~~~a~~  324 (394)
                               ..  ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++++
T Consensus       318 ~a~~~Ga~vl~gg~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~  397 (451)
T cd07146         318 EAIAQGARVLLGNQRQGALYAPTVLDHVPPDAELVTEETFGPVAPVIRVKDLDEAIAISNSTAYGLSSGVCTNDLDTIKR  397 (451)
T ss_pred             HHHhCCCEEEeCCCcCCEEEcCEEeecCCCCCHHHhCCCCCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHH
Confidence                     00  1147899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhcccccceeEEEEcCCCCCCCCCCCccCCCCCCC-CCCchHHHHHhhhheeEEE
Q psy3652         325 WLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGG-GRESGSDSWKQYCRRSTVT  378 (394)
Q Consensus       325 ~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~-G~~~g~~~l~~f~~~k~v~  378 (394)
                      ++  .++++|+|+||..+....+.+||||+|.||+ |+++|.+++++|++.|+++
T Consensus       398 ~~--~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~~g~~~g~~~~~~f~~~k~~~  450 (451)
T cd07146         398 LV--ERLDVGTVNVNEVPGFRSELSPFGGVKDSGLGGKEGVREAMKEMTNVKTYS  450 (451)
T ss_pred             HH--HHCCcceEEECCCCCCCCCCCCcCcccccCCCcccChHHHHHHHhceeEEe
Confidence            99  8899999999986544456789999999995 8999999999999999885

Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD.

>cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like

Probab=100.00  E-value=1.7e-67  Score=532.73  Aligned_cols=317  Identities=33%  Similarity=0.511  Sum_probs=289.8

Q ss_pred             CCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCChHHhHHHHHHHHHH
Q psy3652          60 GETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDI  139 (394)
Q Consensus        60 g~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~  139 (394)
                      |+++++++.++.+++++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..++..|+..+++.
T Consensus         1 ~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ev~~~i~~   80 (443)
T cd07152           1 GAVLGEVGVADAADVDRAAARAAAAQRAWAATPPRERAAVLRRAADLLEEHADEIADWIVRESGSIRPKAGFEVGAAIGE   80 (443)
T ss_pred             CCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Confidence            68999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh------------------------
Q psy3652         140 CDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL------------------------  195 (394)
Q Consensus       140 l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL------------------------  195 (394)
                      ++++++......+...+.. .+...+.+++|+|||++|+|||||+.+.++++++||                        
T Consensus        81 l~~~~~~~~~~~~~~~~~~-~g~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~~l~~  159 (443)
T cd07152          81 LHEAAGLPTQPQGEILPSA-PGRLSLARRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDPRTPVSGGVVIAR  159 (443)
T ss_pred             HHHHHHhHHHhCCcccccc-CCceeEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCcccchhHHHHHHH
Confidence            9999987765544433322 344567889999999999999999999999999999                        


Q ss_pred             -----------------------------------------hHHHHHh----hhhhhccccCCCCeEEEecCCCHHHHHH
Q psy3652         196 -----------------------------------------VGVAVQS----RFGKLLLELGGNNAIIVNEDADLNLAQQ  230 (394)
Q Consensus       196 -----------------------------------------~g~~i~~----~~~~~~lElgGk~p~iV~~dADl~~aa~  230 (394)
                                                               +|+.|++    +++|+++|||||||+||++|||++.|++
T Consensus       160 ~~~~ag~P~gvv~~v~g~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~dAdl~~aa~  239 (443)
T cd07152         160 LFEEAGLPAGVLHVLPGGADAGEALVEDPNVAMISFTGSTAVGRKVGEAAGRHLKKVSLELGGKNALIVLDDADLDLAAS  239 (443)
T ss_pred             HHHHhCcCcCcEEEecCChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCCeEEECCCCCHHHHHH
Confidence                                                     6777654    4589999999999999999999999999


Q ss_pred             HHHHHhhCcCCCcccCCceEEEecc-----------------------------------------------------c-
Q psy3652         231 CLVFACCGTAGQRCTTTRRLFLHKK-----------------------------------------------------K-  256 (394)
Q Consensus       231 ~i~~~~~~~~GQ~C~a~~rv~V~~~-----------------------------------------------------~-  256 (394)
                      .+++++|.|+||.|++++|||||++                                                     . 
T Consensus       240 ~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl  319 (443)
T cd07152         240 NGAWGAFLHQGQICMAAGRHLVHESVADAYTAKLAAKAKHLPVGDPATGQVALGPLINARQLDRVHAIVDDSVAAGARLE  319 (443)
T ss_pred             HHHHHHHhhcCCCCcCCeeEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHhCCCEEE
Confidence            9999999999999999999999999                                                     0 


Q ss_pred             --CCCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHhhccccccee
Q psy3652         257 --IDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCG  334 (394)
Q Consensus       257 --~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g  334 (394)
                        ...+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++++++  .++++|
T Consensus       320 ~gg~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~~~a~~~~--~~l~~G  397 (443)
T cd07152         320 AGGTYDGLFYRPTVLSGVKPGMPAFDEEIFGPVAPVTVFDSDEEAVALANDTEYGLSAGIISRDVGRAMALA--DRLRTG  397 (443)
T ss_pred             eccCcCCEEEcCEEEecCCCCChhhhccccCCeEEEEeeCCHHHHHHHHhCCCccceEEEECCCHHHHHHHH--HhCCcC
Confidence              0113679999999999999999999999999999999999999999999999999999999999999999  889999


Q ss_pred             EEEEcCCCCCCCCCCCccCCCCCCCC-CCchHHHHHhhhheeEEEE
Q psy3652         335 LINVNIPTNGAEIGGAFGGEKYTGGG-RESGSDSWKQYCRRSTVTI  379 (394)
Q Consensus       335 ~V~iN~~~~~~~~~~pfGG~~~SG~G-~~~g~~~l~~f~~~k~v~~  379 (394)
                      .|+||+++....+.+||||+|.||+| +++|++++++|++.|++++
T Consensus       398 ~v~iN~~~~~~~~~~pfGG~~~SG~G~~~~g~~~l~~~~~~k~~~~  443 (443)
T cd07152         398 MLHINDQTVNDEPHNPFGGMGASGNGSRFGGPANWEEFTQWQWVTV  443 (443)
T ss_pred             eEEECCCCCCCCCCCCCCCcccccCCCccCcHHHHHHhhceeEEeC
Confidence            99999876555567999999999999 8889999999999998853

NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids.

>cd07149 ALDH_y4uC Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1

Probab=100.00  E-value=2.6e-67  Score=533.32  Aligned_cols=325  Identities=31%  Similarity=0.499  Sum_probs=296.3

Q ss_pred             eeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCChHHhHH
Q psy3652          52 IPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIG  131 (394)
Q Consensus        52 ~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~  131 (394)
                      ++++||+||+++++++.++.+++++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..++..
T Consensus         1 ~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~   80 (453)
T cd07149           1 IEVISPYDGEVIGRVPVASEEDVEKAIAAAKEGAKEMKSLPAYERAEILERAAQLLEERREEFARTIALEAGKPIKDARK   80 (453)
T ss_pred             CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHH
Confidence            46789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhhhhccCcccCCC----CCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh------------
Q psy3652         132 EVQEFIDICDYAVGLSRTYSGSILPSE----RPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL------------  195 (394)
Q Consensus       132 ev~~~~~~l~~~a~~~~~~~~~~~~~~----~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL------------  195 (394)
                      |+..+++.++++++.+..+.++..+..    ..+...+..++|+|||++|+|||||+.+.++++++||            
T Consensus        81 ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VI~Kps~  160 (453)
T cd07149          81 EVDRAIETLRLSAEEAKRLAGETIPFDASPGGEGRIGFTIREPIGVVAAITPFNFPLNLVAHKVGPAIAAGNAVVLKPAS  160 (453)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCccccccccCCCCCeeEEEEeecceEEEEECCCCChHHHHHHHHHHHHHcCCEEEEECCC
Confidence            999999999999988776655433321    1123456789999999999999999999999999998            


Q ss_pred             -----------------------------------------------------hHHHHHhh--hhhhccccCCCCeEEEe
Q psy3652         196 -----------------------------------------------------VGVAVQSR--FGKLLLELGGNNAIIVN  220 (394)
Q Consensus       196 -----------------------------------------------------~g~~i~~~--~~~~~lElgGk~p~iV~  220 (394)
                                                                           +|+.|++.  ++|+++|+|||||+||+
T Consensus       161 ~~p~~~~~l~~~l~~ag~P~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~lelGGk~p~iV~  240 (453)
T cd07149         161 QTPLSALKLAELLLEAGLPKGALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEAIARKAGLKKVTLELGSNAAVIVD  240 (453)
T ss_pred             cchHHHHHHHHHHHHcCcCccceEEeecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHcCCCceeeecCCCceEEEC
Confidence                                                                 66777653  46899999999999999


Q ss_pred             cCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc---------------------------------------------
Q psy3652         221 EDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK---------------------------------------------  255 (394)
Q Consensus       221 ~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~---------------------------------------------  255 (394)
                      +|||++.|++.+++++|.++||.|+++++||||++                                             
T Consensus       241 ~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~  320 (453)
T cd07149         241 ADADLEKAVERCVSGAFANAGQVCISVQRIFVHEDIYDEFLERFVAATKKLVVGDPLDEDTDVGPMISEAEAERIEEWVE  320 (453)
T ss_pred             CCCCHHHHHHHHHHHHHHhcCCCCCCCceEEEcHhHHHHHHHHHHHHHHhCCcCCCCCCCCccccccCHHHHHHHHHHHH
Confidence            99999999999999999999999999999999998                                             


Q ss_pred             --------c-C--CCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHH
Q psy3652         256 --------K-I--DRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFK  324 (394)
Q Consensus       256 --------~-~--~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~~gLsa~v~t~d~~~a~~  324 (394)
                              . .  ...|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.+
T Consensus       321 ~a~~~ga~v~~gg~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gLt~~v~t~d~~~~~~  400 (453)
T cd07149         321 EAVEGGARLLTGGKRDGAILEPTVLTDVPPDMKVVCEEVFAPVVSLNPFDTLDEAIAMANDSPYGLQAGVFTNDLQKALK  400 (453)
T ss_pred             HHHHCCCEEEeCCCCCCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEEeCCHHHHHHHHhCCCcCceEEEEcCCHHHHHH
Confidence                    0 0  1247899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEE
Q psy3652         325 WLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVT  378 (394)
Q Consensus       325 ~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~  378 (394)
                      ++  .++++|.|+||++.+...+.+||||+|.||+|+++|.+++++|++.|++.
T Consensus       401 ~~--~~l~~g~v~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~~~  452 (453)
T cd07149         401 AA--RELEVGGVMINDSSTFRVDHMPYGGVKESGTGREGPRYAIEEMTEIKLVC  452 (453)
T ss_pred             HH--HHcCcCeEEECCCCCCCCCCCCcCCccccccCCCChHHHHHHhhceeEEe
Confidence            99  88999999999876555567899999999999999999999999999885

Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.

>cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like

Probab=100.00  E-value=2.1e-67  Score=534.01  Aligned_cols=323  Identities=32%  Similarity=0.564  Sum_probs=296.0

Q ss_pred             eecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHH--HhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCChHHhHH
Q psy3652          54 SINPSTGETIASVQQGNVQDYHRCIESSRAAYA--AWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIG  131 (394)
Q Consensus        54 v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~  131 (394)
                      ++||+||+++++++.++.+++++++++|++|++  .|+.+|.++|.++|++++++|.+++++|++++++|+|||..+++.
T Consensus         1 ~~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~   80 (457)
T cd07114           1 SINPATGEPWARVPEASAADVDRAVAAARAAFEGGAWRKLTPTERGKLLRRLADLIEANAEELAELETRDNGKLIRETRA   80 (457)
T ss_pred             CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH
Confidence            469999999999999999999999999999997  499999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh----------------
Q psy3652         132 EVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL----------------  195 (394)
Q Consensus       132 ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL----------------  195 (394)
                      |+..+++.+++++...+.+.+...+....+...++.++|+|||++|+|||||+.+.++++++||                
T Consensus        81 ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~Vilkps~~~p~  160 (457)
T cd07114          81 QVRYLAEWYRYYAGLADKIEGAVIPVDKGDYLNFTRREPLGVVAAITPWNSPLLLLAKKLAPALAAGNTVVLKPSEHTPA  160 (457)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEecceEEEEECCCccHHHHHHHHHHHHHhcCCeEEeECCccchH
Confidence            9999999999999887776554444322345567889999999999999999999999999999                


Q ss_pred             -------------------------------------------------hHHHHHh----hhhhhccccCCCCeEEEecC
Q psy3652         196 -------------------------------------------------VGVAVQS----RFGKLLLELGGNNAIIVNED  222 (394)
Q Consensus       196 -------------------------------------------------~g~~i~~----~~~~~~lElgGk~p~iV~~d  222 (394)
                                                                       +|+.+++    +++|+++|+|||||+||++|
T Consensus       161 ~~~~l~~~l~~aglP~~vv~~v~g~~~~~~~~l~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~d  240 (457)
T cd07114         161 STLELAKLAEEAGFPPGVVNVVTGFGPETGEALVEHPLVAKIAFTGGTETGRHIARAAAENLAPVTLELGGKSPNIVFDD  240 (457)
T ss_pred             HHHHHHHHHHHcCcCCCcEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEecCCCCeeEECCC
Confidence                                                             6677765    36799999999999999999


Q ss_pred             CCHHHHHHHHHHHhhCcCCCcccCCceEEEecc-----------------------------------------------
Q psy3652         223 ADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK-----------------------------------------------  255 (394)
Q Consensus       223 ADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~-----------------------------------------------  255 (394)
                      ||++.|++.|++++|.|+||.|+++++||||++                                               
T Consensus       241 Adl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a  320 (457)
T cd07114         241 ADLDAAVNGVVAGIFAAAGQTCVAGSRLLVQRSIYDEFVERLVARARAIRVGDPLDPETQMGPLATERQLEKVERYVARA  320 (457)
T ss_pred             CCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999998                                               


Q ss_pred             ------c-C-----C----CCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcCCCCcEEEEEcCCH
Q psy3652         256 ------K-I-----D----RPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDV  319 (394)
Q Consensus       256 ------~-~-----~----~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~~gLsa~v~t~d~  319 (394)
                            . .     .    ..|+|++|||+.++++++++++||+||||++|++|+|.||||+++|+++|||++||||+|.
T Consensus       321 ~~~ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~ift~d~  400 (457)
T cd07114         321 REEGARVLTGGERPSGADLGAGYFFEPTILADVTNDMRIAQEEVFGPVLSVIPFDDEEEAIALANDSEYGLAAGIWTRDL  400 (457)
T ss_pred             HHCCCEEEeCCCccccccCCCCCEECCEEEeCCCCCChhhhcCCcCceEEEeccCCHHHHHHHhhCCCcCceeEEECCCH
Confidence                  0 0     0    1378999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEE
Q psy3652         320 TNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTI  379 (394)
Q Consensus       320 ~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~  379 (394)
                      +.+++++  .++++|.|+||..+ ...+.+||||+|.||+|+++|.+++++|++.|++++
T Consensus       401 ~~~~~~~--~~l~~g~v~iN~~~-~~~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~~~~  457 (457)
T cd07114         401 ARAHRVA--RAIEAGTVWVNTYR-ALSPSSPFGGFKDSGIGRENGIEAIREYTQTKSVWI  457 (457)
T ss_pred             HHHHHHH--HhcCcceEEECCCC-CCCCCCCCCCCccCcCCccchHHHHHHHhceeEEeC
Confidence            9999999  88999999999864 355678999999999999999999999999998853

Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD.

>cd07126 ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12

Probab=100.00  E-value=5.4e-67  Score=529.90  Aligned_cols=324  Identities=22%  Similarity=0.312  Sum_probs=288.4

Q ss_pred             ceeCCeeccCCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHh--hcCChhhH----HHHHHHHHHHHhhC--
Q psy3652          39 VYDGTSWKANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAW--AALPAPRR----GEIVRQIGDALRHK--  110 (394)
Q Consensus        39 ~~i~G~~~~~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w--~~~~~~~R----~~~L~~~a~~l~~~--  110 (394)
                      +||||+|+.++++++++||+||+++++++.++.+|+++|+++|++||+.|  +.++..+|    .++|+++++.|+++  
T Consensus         1 ~~i~g~~~~~~~~~~~~nP~t~~~i~~~~~a~~~dv~~Av~aA~~A~~~W~~~~~~~~~R~l~~~~il~~~a~~l~~~~~   80 (489)
T cd07126           1 NLVAGKWKGASNYTTLLDPLNGDKFISVPDTDEDEINEFVDSLRQCPKSGLHNPLKNPERYLLYGDVSHRVAHELRKPEV   80 (489)
T ss_pred             CcCCCEEecCCCcEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHhccccCCCHHHHhhhHHHHHHHHHHHHHcCCC
Confidence            47999998667889999999999999999999999999999999999998  55778899    89999999999998  


Q ss_pred             HHHHHHHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCccc--CCCCCCceeEeeeccceeEEEEccCCchhHhHH
Q psy3652         111 LVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSIL--PSERPGHVLLENWNPLGVVGIISAFNFPVAVYG  188 (394)
Q Consensus       111 ~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~--~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~  188 (394)
                      .++|++++++|+|||+.+++.|+..+++.++|+++..++..+...  +...++...+++++|+|||++|+|||||+.+.+
T Consensus        81 ~~~la~~~~~e~GK~~~~a~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~v~r~P~GVV~~I~PwNfP~~l~~  160 (489)
T cd07126          81 EDFFARLIQRVAPKSDAQALGEVVVTRKFLENFAGDQVRFLARSFNVPGDHQGQQSSGYRWPYGPVAIITPFNFPLEIPA  160 (489)
T ss_pred             HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCCceeEEEEecceEEEEECCCchHHHHHH
Confidence            599999999999999999999999999999999988777655432  222234456889999999999999999999999


Q ss_pred             HHHHHHh----------------------------------------------------------------hHHHHHh-h
Q psy3652         189 WNAAIAL----------------------------------------------------------------VGVAVQS-R  203 (394)
Q Consensus       189 ~~~~~aL----------------------------------------------------------------~g~~i~~-~  203 (394)
                      +++++||                                                                +|+.|+. .
T Consensus       161 ~~ia~ALaaGN~VVlKPSe~tp~~~~~l~~~~~~aGlP~gv~~vv~G~~~~~~~l~~~~~v~~V~FTGS~~vGr~i~~~~  240 (489)
T cd07126         161 LQLMGALFMGNKPLLKVDSKVSVVMEQFLRLLHLCGMPATDVDLIHSDGPTMNKILLEANPRMTLFTGSSKVAERLALEL  240 (489)
T ss_pred             HHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHhCcCcCcEEEEeCCchhHHHHhcCCCCCEEEEECCHHHHHHHHHHh
Confidence            9999999                                                                7777765 3


Q ss_pred             hhhhccccCCCCeEEEecCC-CHHHHHHHHHHHhhCcCCCcccCCceEEEecc---------------------------
Q psy3652         204 FGKLLLELGGNNAIIVNEDA-DLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK---------------------------  255 (394)
Q Consensus       204 ~~~~~lElgGk~p~iV~~dA-Dl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~---------------------------  255 (394)
                      .+++++|+|||||+||++|| |++.|++.+++++|.|+||.|++++|+|||++                           
T Consensus       241 g~k~~lElgg~~~~IV~~Da~dld~a~~~~~~g~f~naGQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~~~~~g~~~~Gpl  320 (489)
T cd07126         241 HGKVKLEDAGFDWKILGPDVSDVDYVAWQCDQDAYACSGQKCSAQSILFAHENWVQAGILDKLKALAEQRKLEDLTIGPV  320 (489)
T ss_pred             CCCEEeecCCCCceEECCCcccHHHHHHHHHHHHHhcCCCcCCCCceEEEeCcchHHHHHHHHHHHHHhcccCCCcCCCC
Confidence            46899999999999999999 99999999999999999999999999999999                           


Q ss_pred             --------------cC--------------CC----CC-ceecCeEEEc------CCCCCcccccccccceEEEEeeCC-
Q psy3652         256 --------------KI--------------DR----PG-YFVEPTIVTG------LPHNSRVVHRETFAPIVYVFPFDS-  295 (394)
Q Consensus       256 --------------~~--------------~~----~g-~~~~Ptvl~~------v~~~~~i~~eE~FGPvl~v~~~~~-  295 (394)
                                    ..              +.    .| .|++|||+..      ++++|++++||+||||++|++|+| 
T Consensus       321 i~~~~~~v~~~i~~a~~~~Ga~~l~GG~~~~~~~~~~~~~~~~PTvl~~~~~~~~~~~~~~i~~eEiFGPVl~V~~~~~~  400 (489)
T cd07126         321 LTWTTERILDHVDKLLAIPGAKVLFGGKPLTNHSIPSIYGAYEPTAVFVPLEEIAIEENFELVTTEVFGPFQVVTEYKDE  400 (489)
T ss_pred             cCHHHHHHHHHHHHHHhCCCCEEEeCCcccccccccCCcceecCeEEEeccccccCCCCCHHHhCCCcCCEEEEEEECCC
Confidence                          00              01    12 3899999842      678999999999999999999999 


Q ss_pred             -HHHHHHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeE--EEEcCCCCCCCCC---CCccCCCCCCCCCCch
Q psy3652         296 -LDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGL--INVNIPTNGAEIG---GAFGGEKYTGGGRESG  364 (394)
Q Consensus       296 -~~eAi~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~--V~iN~~~~~~~~~---~pfGG~~~SG~G~~~g  364 (394)
                       +||||+++|+++|||++||||+|..++++++  .++++|+  |+||..+.+....   .||||+|.||+|+++.
T Consensus       401 ~~deai~~aN~~~~gL~~~vft~d~~~~~~~~--~~~~~G~~~v~~n~~~~~~~~~~~~~pfgg~k~sg~g~~~~  473 (489)
T cd07126         401 QLPLVLEALERMHAHLTAAVVSNDIRFLQEVL--ANTVNGTTYAGIRARTTGAPQNHWFGPAGDPRGAGIGTPEA  473 (489)
T ss_pred             CHHHHHHHHhCCCCCceEEEEeCCHHHHHHHH--HhCCcceEEEEecCCCCCCCcccCcCCCCCCcccCCCCHhH
Confidence             9999999999999999999999999999999  8899999  6689876666554   8999999999998764

Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences.

>cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like

Probab=100.00  E-value=5.5e-67  Score=530.56  Aligned_cols=322  Identities=33%  Similarity=0.571  Sum_probs=296.8

Q ss_pred             eecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCChHHhHHHH
Q psy3652          54 SINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEV  133 (394)
Q Consensus        54 v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev  133 (394)
                      ++||.||+++++++.++++++++++++|++|++.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++.|+
T Consensus         1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev   80 (451)
T cd07103           1 VINPATGEVIGEVPDAGAADADAAIDAAAAAFKTWRKTTARERAAILRRWADLIRERAEDLARLLTLEQGKPLAEARGEV   80 (451)
T ss_pred             CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence            47999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh------------------
Q psy3652         134 QEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL------------------  195 (394)
Q Consensus       134 ~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL------------------  195 (394)
                      ..+++.++|++...+++.+...+...++...+..++|+|||++|+|||||+.+.++++++||                  
T Consensus        81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~~~~  160 (451)
T cd07103          81 DYAASFLEWFAEEARRIYGRTIPSPAPGKRILVIKQPVGVVAAITPWNFPAAMITRKIAPALAAGCTVVLKPAEETPLSA  160 (451)
T ss_pred             HHHHHHHHHHHHHHHHhcCcccccCCCCcceEEEEeeceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCcHHH
Confidence            99999999999887776665444333455567889999999999999999999999999999                  


Q ss_pred             -----------------------------------------------hHHHHHh----hhhhhccccCCCCeEEEecCCC
Q psy3652         196 -----------------------------------------------VGVAVQS----RFGKLLLELGGNNAIIVNEDAD  224 (394)
Q Consensus       196 -----------------------------------------------~g~~i~~----~~~~~~lElgGk~p~iV~~dAD  224 (394)
                                                                     +|+.+.+    +++|+++|+|||||+||++|||
T Consensus       161 ~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~vd~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~dad  240 (451)
T cd07103         161 LALAELAEEAGLPAGVLNVVTGSPAEIGEALCASPRVRKISFTGSTAVGKLLMAQAADTVKRVSLELGGNAPFIVFDDAD  240 (451)
T ss_pred             HHHHHHHHHcCCCcccEEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCCeEEECCCCC
Confidence                                                           5666654    5678999999999999999999


Q ss_pred             HHHHHHHHHHHhhCcCCCcccCCceEEEecc-------------------------------------------------
Q psy3652         225 LNLAQQCLVFACCGTAGQRCTTTRRLFLHKK-------------------------------------------------  255 (394)
Q Consensus       225 l~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~-------------------------------------------------  255 (394)
                      ++.|++.+++++|.|+||.|+++++||||++                                                 
T Consensus       241 l~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~  320 (451)
T cd07103         241 LDKAVDGAIASKFRNAGQTCVCANRIYVHESIYDEFVEKLVERVKKLKVGNGLDEGTDMGPLINERAVEKVEALVEDAVA  320 (451)
T ss_pred             HHHHHHHHHHHHHHhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcCcCHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999                                                 


Q ss_pred             -----c----C-CCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHh
Q psy3652         256 -----K----I-DRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKW  325 (394)
Q Consensus       256 -----~----~-~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~~gLsa~v~t~d~~~a~~~  325 (394)
                           .    . ...|+|+.|||+.+++++++++++|+||||++|++|+|++|||+++|+++|||+++|||+|.+.++++
T Consensus       321 ~ga~~l~gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~  400 (451)
T cd07103         321 KGAKVLTGGKRLGLGGYFYEPTVLTDVTDDMLIMNEETFGPVAPIIPFDTEDEVIARANDTPYGLAAYVFTRDLARAWRV  400 (451)
T ss_pred             CCCEEEeCCCcCCCCCcEECCEEeeCCCCcCHHHhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHHHHHH
Confidence                 0    0 11578999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEE
Q psy3652         326 LGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVT  378 (394)
Q Consensus       326 ~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~  378 (394)
                      +  .++++|.|+||+++. ..+..||||+|.||+|+++|++++++|++.|++.
T Consensus       401 ~--~~l~~g~v~vN~~~~-~~~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~v~  450 (451)
T cd07103         401 A--EALEAGMVGINTGLI-SDAEAPFGGVKESGLGREGGKEGLEEYLETKYVS  450 (451)
T ss_pred             H--HhCCcceEEECCCCC-CCCCCCcCCCccCcCCccchHHHHHHHhceeEEe
Confidence            9  889999999998753 4567899999999999999999999999999885

Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species.

>PTZ00381 aldehyde dehydrogenase family protein; Provisional

Probab=100.00  E-value=6.7e-67  Score=531.60  Aligned_cols=312  Identities=21%  Similarity=0.286  Sum_probs=282.4

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCChHHhH-HHHHHHHHHHHHHHHh
Q psy3652          68 QGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGI-GEVQEFIDICDYAVGL  146 (394)
Q Consensus        68 ~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~  146 (394)
                      ..+.+|+++++++|++||+.|+.+|.++|.++|++++++|++++++|++++++|+|||..++. .|+..+++.++++++.
T Consensus         3 ~~~~~~i~~av~~a~~a~~~~~~~~~~~R~~~L~~l~~~l~~~~~~i~~a~~~d~Gk~~~ea~~~Ev~~~~~~i~~~~~~   82 (493)
T PTZ00381          3 PDNPEIIPPIVKKLKESFLTGKTRPLEFRKQQLRNLLRMLEENKQEFSEAVHKDLGRHPFETKMTEVLLTVAEIEHLLKH   82 (493)
T ss_pred             CCCHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            368999999999999999999999999999999999999999999999999999999999995 5999999999999988


Q ss_pred             hhhccCcc-cCCC--CCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh----------------------------
Q psy3652         147 SRTYSGSI-LPSE--RPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL----------------------------  195 (394)
Q Consensus       147 ~~~~~~~~-~~~~--~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL----------------------------  195 (394)
                      ++++.+.. ....  ......+++++|+|||++|+|||||+.+.++++++||                            
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~iI~PwN~Pl~l~~~~l~~ALaaGN~VIlKPse~tp~t~~~l~~ll~~~  162 (493)
T PTZ00381         83 LDEYLKPEKVDTVGVFGPGKSYIIPEPLGVVLVIGAWNYPLNLTLIPLAGAIAAGNTVVLKPSELSPHTSKLMAKLLTKY  162 (493)
T ss_pred             HHHHhCCcccCCccccCCCceEEEEecCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh
Confidence            77754322 1111  1123467899999999999999999999999999999                            


Q ss_pred             ----------------------------------hHHHHHh----hhhhhccccCCCCeEEEecCCCHHHHHHHHHHHhh
Q psy3652         196 ----------------------------------VGVAVQS----RFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACC  237 (394)
Q Consensus       196 ----------------------------------~g~~i~~----~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~  237 (394)
                                                        +|+.|++    +++|+++|||||||+||++|||++.|++.+++++|
T Consensus       163 lp~~~v~vv~g~~~~~~~l~~~~~d~i~FTGS~~vG~~V~~~aa~~l~pv~lElGGk~p~iV~~dAdl~~Aa~~i~~g~~  242 (493)
T PTZ00381        163 LDPSYVRVIEGGVEVTTELLKEPFDHIFFTGSPRVGKLVMQAAAENLTPCTLELGGKSPVIVDKSCNLKVAARRIAWGKF  242 (493)
T ss_pred             CCcCEEEEecCCHHHHHHHHhCCCCEEEEECCHHHHHHHHHHHHhcCCcEEEEcCCCCceEEcCCCCHHHHHHHHHHHHH
Confidence                                              7777765    46799999999999999999999999999999999


Q ss_pred             CcCCCcccCCceEEEecc-----------------------------------------c-------------CCCCCce
Q psy3652         238 GTAGQRCTTTRRLFLHKK-----------------------------------------K-------------IDRPGYF  263 (394)
Q Consensus       238 ~~~GQ~C~a~~rv~V~~~-----------------------------------------~-------------~~~~g~~  263 (394)
                      .|+||.|++++|||||++                                         .             .+..|+|
T Consensus       243 ~naGQ~C~A~~~vlV~~~i~d~f~~~l~~~~~~~~g~~~~~~~~~gpli~~~~~~ri~~~i~~~ga~~~~gG~~~~~~~~  322 (493)
T PTZ00381        243 LNAGQTCVAPDYVLVHRSIKDKFIEALKEAIKEFFGEDPKKSEDYSRIVNEFHTKRLAELIKDHGGKVVYGGEVDIENKY  322 (493)
T ss_pred             hhcCCcCCCCCEEEEeHHHHHHHHHHHHHHHHHHhCCCCccCCCcCCCCCHHHHHHHHHHHHhCCCcEEECCCcCCCCCe
Confidence            999999999999999999                                         0             0123789


Q ss_pred             ecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCC-
Q psy3652         264 VEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPT-  342 (394)
Q Consensus       264 ~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~-  342 (394)
                      +.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|...+++++  .++++|.|+||+.. 
T Consensus       323 i~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~~n~~~~gLa~~vft~d~~~~~~~~--~~~~sG~v~IN~~~~  400 (493)
T PTZ00381        323 VAPTIIVNPDLDSPLMQEEIFGPILPILTYENIDEVLEFINSRPKPLALYYFGEDKRHKELVL--ENTSSGAVVINDCVF  400 (493)
T ss_pred             EeeEEEecCCCCChHHhccccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHH--HhCCcceEEECCccc
Confidence            999999999999999999999999999999999999999999999999999999999999999  88999999999864 


Q ss_pred             CCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEEec
Q psy3652         343 NGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTINH  381 (394)
Q Consensus       343 ~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~~~  381 (394)
                      +...+.+||||+|.||+|+++|.+++++|++.|+|+.+.
T Consensus       401 ~~~~~~~PFGG~g~SG~G~~~G~~g~~~fs~~k~v~~~~  439 (493)
T PTZ00381        401 HLLNPNLPFGGVGNSGMGAYHGKYGFDTFSHPKPVLNKS  439 (493)
T ss_pred             cccCCCCCCCCcCcccccccchHHHHHhccceeEEEEcc
Confidence            334577999999999999999999999999999998874

>cd07098 ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and 22A1-like

Probab=100.00  E-value=3.8e-66  Score=525.91  Aligned_cols=324  Identities=25%  Similarity=0.400  Sum_probs=292.5

Q ss_pred             ecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCChHHhH-HHH
Q psy3652          55 INPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGI-GEV  133 (394)
Q Consensus        55 ~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev  133 (394)
                      +||.||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|++++++|.+++++|++++++|+|||+.+++ .|+
T Consensus         1 ~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~e~   80 (465)
T cd07098           1 YDPATGQHLGSVPADTPEDVDEAIAAARAAQREWAKTSFAERRKVLRSLLKYILENQEEICRVACRDTGKTMVDASLGEI   80 (465)
T ss_pred             CCCCCCCeeEEeeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHH
Confidence            4999999999999999999999999999999999999999999999999999999999999999999999999995 599


Q ss_pred             HHHHHHHHHHHHhhhhccC-cccCCC--CCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh---------------
Q psy3652         134 QEFIDICDYAVGLSRTYSG-SILPSE--RPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL---------------  195 (394)
Q Consensus       134 ~~~~~~l~~~a~~~~~~~~-~~~~~~--~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL---------------  195 (394)
                      ..+++.++++++..+.... ...+..  ..+...++.++|+|||++|+|||||+.++++++++||               
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p  160 (465)
T cd07098          81 LVTCEKIRWTLKHGEKALRPESRPGGLLMFYKRARVEYEPLGVVGAIVSWNYPFHNLLGPIIAALFAGNAIVVKVSEQVA  160 (465)
T ss_pred             HHHHHHHHHHHHHHHHHhCCcccCCccccCCceeEEEEecceeEEEEcccCcHHHHHHHHHHHHHHcCCEEEEECCCcCc
Confidence            9999999999887665322 222211  1123456789999999999999999999999999998               


Q ss_pred             -----------------------------------------------------hHHHHHh----hhhhhccccCCCCeEE
Q psy3652         196 -----------------------------------------------------VGVAVQS----RFGKLLLELGGNNAII  218 (394)
Q Consensus       196 -----------------------------------------------------~g~~i~~----~~~~~~lElgGk~p~i  218 (394)
                                                                           +|+.|++    .++|+++|+|||||+|
T Consensus       161 ~~~~~~~~~~~~~l~~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~v~~~a~~~~~~~~lelgG~~~~i  240 (465)
T cd07098         161 WSSGFFLSIIRECLAACGHDPDLVQLVTCLPETAEALTSHPVIDHITFIGSPPVGKKVMAAAAESLTPVVLELGGKDPAI  240 (465)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCCeEEEEECCHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCeEE
Confidence                                                                 6666655    4679999999999999


Q ss_pred             EecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc-------------------------------------------
Q psy3652         219 VNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK-------------------------------------------  255 (394)
Q Consensus       219 V~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~-------------------------------------------  255 (394)
                      |++|||++.|++.+++++|.|+||.|++++|||||++                                           
T Consensus       241 V~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~~~~~  320 (465)
T cd07098         241 VLDDADLDQIASIIMRGTFQSSGQNCIGIERVIVHEKIYDKLLEILTDRVQALRQGPPLDGDVDVGAMISPARFDRLEEL  320 (465)
T ss_pred             ECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHHH
Confidence            9999999999999999999999999999999999998                                           


Q ss_pred             -----------cC---C------CCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcCCCCcEEEEE
Q psy3652         256 -----------KI---D------RPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIF  315 (394)
Q Consensus       256 -----------~~---~------~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~~gLsa~v~  315 (394)
                                 ..   .      ..|+|+.|||+.+++++|+++++|+||||++|++|+|+||||+++|+++|||+++||
T Consensus       321 i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gLsa~i~  400 (465)
T cd07098         321 VADAVEKGARLLAGGKRYPHPEYPQGHYFPPTLLVDVTPDMKIAQEEVFGPVMVVMKASDDEEAVEIANSTEYGLGASVF  400 (465)
T ss_pred             HHHHHHCCCEEEeCCccCCcCcCCCCcEEcCEEEeCCCCCCHHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEE
Confidence                       00   0      147999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCHHHHHHhhcccccceeEEEEcCCC-CCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEEe
Q psy3652         316 TKDVTNLFKWLGPQGSDCGLINVNIPT-NGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTIN  380 (394)
Q Consensus       316 t~d~~~a~~~~~~~~~~~g~V~iN~~~-~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~~  380 (394)
                      |+|.+.+.+++  .++++|.|+||... ....+..||||+|.||+|+++|.+++++|++.|+++++
T Consensus       401 t~d~~~~~~~~--~~l~~g~v~iN~~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~~~~~  464 (465)
T cd07098         401 GKDIKRARRIA--SQLETGMVAINDFGVNYYVQQLPFGGVKGSGFGRFAGEEGLRGLCNPKSVTED  464 (465)
T ss_pred             cCCHHHHHHHH--HhCCcceEEECCCCCCCCCCCCCcCccccccCCccChHHHHHHhheeEEEEEe
Confidence            99999999999  88999999999854 44456789999999999999999999999999999775

Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation.

>PLN02203 aldehyde dehydrogenase

Probab=100.00  E-value=3.2e-66  Score=524.58  Aligned_cols=312  Identities=22%  Similarity=0.309  Sum_probs=281.3

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCChHHhH-HHHHHHHHHHHHHHHh
Q psy3652          68 QGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGI-GEVQEFIDICDYAVGL  146 (394)
Q Consensus        68 ~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~  146 (394)
                      .+..+||++|+++|++||+.|+.+|..+|.++|++++++|++++++|++++++|+|||+.++. .|+..+++.++|+++.
T Consensus         2 ~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~~~~   81 (484)
T PLN02203          2 EAPGETLEGSVAELRETYESGRTRSLEWRKSQLKGLLRLLKDNEEAIFKALHQDLGKHRVEAYRDEVGVLTKSANLALSN   81 (484)
T ss_pred             CCCHHHHHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999999999999999999999999999995 6999999999999988


Q ss_pred             hhhccCcc---cCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh----------------------------
Q psy3652         147 SRTYSGSI---LPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL----------------------------  195 (394)
Q Consensus       147 ~~~~~~~~---~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL----------------------------  195 (394)
                      ++++.+..   .+....+...++.++|+|||++|+|||||+.+.++++++||                            
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~reP~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~~  161 (484)
T PLN02203         82 LKKWMAPKKAKLPLVAFPATAEVVPEPLGVVLIFSSWNFPIGLSLEPLIGAIAAGNAVVLKPSELAPATSAFLAANIPKY  161 (484)
T ss_pred             HHHHhccccccCCcccCCceeEEEEecccEEEEEcCCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHh
Confidence            77764431   12111234567889999999999999999999999999999                            


Q ss_pred             ----------------------------------hHHHHHh----hhhhhccccCCCCeEEEec---CCCHHHHHHHHHH
Q psy3652         196 ----------------------------------VGVAVQS----RFGKLLLELGGNNAIIVNE---DADLNLAQQCLVF  234 (394)
Q Consensus       196 ----------------------------------~g~~i~~----~~~~~~lElgGk~p~iV~~---dADl~~aa~~i~~  234 (394)
                                                        +|+.|++    +++|+++|||||||+||++   |||++.|++.+++
T Consensus       162 lP~gvv~vv~g~~~~~~~l~~~~vd~v~fTGS~~~G~~v~~~aa~~l~~v~lElGGknp~iV~~d~~daDl~~aa~~i~~  241 (484)
T PLN02203        162 LDSKAVKVIEGGPAVGEQLLQHKWDKIFFTGSPRVGRIIMTAAAKHLTPVALELGGKCPCIVDSLSSSRDTKVAVNRIVG  241 (484)
T ss_pred             CCcCEEEEEeCCHHHHHHHHhCCCCEEEEECCHHHHHHHHHHHHhcCCCEEEEecCCCeEEEccCCCCCCHHHHHHHHHH
Confidence                                              6776655    4679999999999999997   6999999999999


Q ss_pred             HhhC-cCCCcccCCceEEEecc--------------------------------------------------------cC
Q psy3652         235 ACCG-TAGQRCTTTRRLFLHKK--------------------------------------------------------KI  257 (394)
Q Consensus       235 ~~~~-~~GQ~C~a~~rv~V~~~--------------------------------------------------------~~  257 (394)
                      ++|. |+||.|++++|+|||++                                                        ..
T Consensus       242 ~~f~~~aGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~Gpli~~~~~~~v~~~i~~a~~~~~~~~gg~~  321 (484)
T PLN02203        242 GKWGSCAGQACIAIDYVLVEERFAPILIELLKSTIKKFFGENPRESKSMARILNKKHFQRLSNLLKDPRVAASIVHGGSI  321 (484)
T ss_pred             HhcccCCCCccccCCeEEEcHHHHHHHHHHHHHHHHHhcCCCCCcCCCcCCCCCHHHHHHHHHHHHHHHhCCeEEeCCCc
Confidence            9995 89999999999999999                                                        00


Q ss_pred             CCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEE
Q psy3652         258 DRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLIN  337 (394)
Q Consensus       258 ~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~  337 (394)
                      +..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.+++++++  .++++|.|+
T Consensus       322 ~~~g~~i~PTvl~~v~~d~~i~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~vft~d~~~a~~~~--~~l~~G~V~  399 (484)
T PLN02203        322 DEKKLFIEPTILLNPPLDSDIMTEEIFGPLLPIITVKKIEDSIAFINSKPKPLAIYAFTNNEKLKRRIL--SETSSGSVT  399 (484)
T ss_pred             CCCCCEEeeEEEecCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHH--HhCCcceEE
Confidence            124889999999999999999999999999999999999999999999999999999999999999999  889999999


Q ss_pred             EcCCCCC-CCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEEec
Q psy3652         338 VNIPTNG-AEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTINH  381 (394)
Q Consensus       338 iN~~~~~-~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~~~  381 (394)
                      ||.+... ..+.+||||+|.||+|+++|.+++++|++.|+++++.
T Consensus       400 IN~~~~~~~~~~~PfGG~k~SG~Gr~~g~~~l~~ft~~k~v~~~~  444 (484)
T PLN02203        400 FNDAIIQYACDSLPFGGVGESGFGRYHGKYSFDTFSHEKAVLRRS  444 (484)
T ss_pred             ECCcccccCCCCCCCCCcCcccCCccccHHHHHHhcceeEEEEcC
Confidence            9986432 3467899999999999999999999999999998874

>cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like

Probab=100.00  E-value=1.7e-65  Score=520.14  Aligned_cols=321  Identities=30%  Similarity=0.524  Sum_probs=293.0

Q ss_pred             eecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCChHHhH-HH
Q psy3652          54 SINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGI-GE  132 (394)
Q Consensus        54 v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~e  132 (394)
                      ++||+||+++++++.++.+++++++++|++||+.|+.+|.++|.++|++++++|++++++|++++++|+|||..+++ .|
T Consensus         1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~~e   80 (455)
T cd07093           1 NFNPATGEVLAKVPEGGAAEVDAAVAAAKEAFPGWSRMSPAERARILHKVADLIEARADELALLESLDTGKPITLARTRD   80 (455)
T ss_pred             CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence            36999999999999999999999999999999999999999999999999999999999999999999999999885 59


Q ss_pred             HHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh-----------------
Q psy3652         133 VQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL-----------------  195 (394)
Q Consensus       133 v~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL-----------------  195 (394)
                      +..+++.++++++......+...+.. .+...+.+++|+|||++|+|||||+.+.++++++||                 
T Consensus        81 v~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlkps~~~p~~  159 (455)
T cd07093          81 IPRAAANFRFFADYILQLDGESYPQD-GGALNYVLRQPVGVAGLITPWNLPLMLLTWKIAPALAFGNTVVLKPSEWTPLT  159 (455)
T ss_pred             HHHHHHHHHHHHHhHHHhCCccccCC-CCceEEEEEEeeeEEEEECCCChHHHHHHHHHHHHHhcCCEEEeECCCcCcHH
Confidence            99999999999988766544333221 244567789999999999999999999999999999                 


Q ss_pred             ------------------------------------------------hHHHHHh----hhhhhccccCCCCeEEEecCC
Q psy3652         196 ------------------------------------------------VGVAVQS----RFGKLLLELGGNNAIIVNEDA  223 (394)
Q Consensus       196 ------------------------------------------------~g~~i~~----~~~~~~lElgGk~p~iV~~dA  223 (394)
                                                                      +|+.+++    +++|+++|+|||||+||++||
T Consensus       160 ~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~dA  239 (455)
T cd07093         160 AWLLAELANEAGLPPGVVNVVHGFGPEAGAALVAHPDVDLISFTGETATGRTIMRAAAPNLKPVSLELGGKNPNIVFADA  239 (455)
T ss_pred             HHHHHHHHHhcCCCccceEEEecCchHHHHHHhcCCCccEEEEECCHHHHHHHHHHHhhcccceEeecCCCCceEECCCC
Confidence                                                            6677765    468999999999999999999


Q ss_pred             CHHHHHHHHHHHhhCcCCCcccCCceEEEecc------------------------------------------------
Q psy3652         224 DLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK------------------------------------------------  255 (394)
Q Consensus       224 Dl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~------------------------------------------------  255 (394)
                      |++.|++.+++++|.|+||.|+++++||||++                                                
T Consensus       240 dl~~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~  319 (455)
T cd07093         240 DLDRAVDAAVRSSFSNNGEVCLAGSRILVQRSIYDEFLERFVERAKALKVGDPLDPDTEVGPLISKEHLEKVLGYVELAR  319 (455)
T ss_pred             CHHHHHHHHHHHHHhccCCCcCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999                                                


Q ss_pred             -----c-----CC-----CCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcCCCCcEEEEEcCCHH
Q psy3652         256 -----K-----ID-----RPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVT  320 (394)
Q Consensus       256 -----~-----~~-----~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~~gLsa~v~t~d~~  320 (394)
                           .     ..     ..|+|+.|||+.++++++++++||+||||++|++|+|.||||+++|+++|||+++|||+|.+
T Consensus       320 ~~ga~v~~gg~~~~~~~~~~~~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gls~~i~t~d~~  399 (455)
T cd07093         320 AEGATILTGGGRPELPDLEGGYFVEPTVITGLDNDSRVAQEEIFGPVVTVIPFDDEEEAIELANDTPYGLAAYVWTRDLG  399 (455)
T ss_pred             HCCCEEEeCCCccccccCCCCceECCEEEecCCCCChHHhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHH
Confidence                 0     00     13789999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEE
Q psy3652         321 NLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVT  378 (394)
Q Consensus       321 ~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~  378 (394)
                      .+++++  .++++|.|+||+.... .+..||||+|.||+|+++|.+++++|++.|+++
T Consensus       400 ~~~~~~--~~l~~g~v~iN~~~~~-~~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~~~  454 (455)
T cd07093         400 RAHRVA--RRLEAGTVWVNCWLVR-DLRTPFGGVKASGIGREGGDYSLEFYTELKNVC  454 (455)
T ss_pred             HHHHHH--HhCCcceEEECCCCCC-CCCCCcCCCccCcCCCCchHHHHHHHhceeEEe
Confidence            999999  8899999999986543 467899999999999999999999999999885

In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone.

>cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like

Probab=100.00  E-value=1.3e-65  Score=516.61  Aligned_cols=300  Identities=31%  Similarity=0.458  Sum_probs=275.3

Q ss_pred             HHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccC-
Q psy3652          74 YHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSG-  152 (394)
Q Consensus        74 v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~-  152 (394)
                      |++|+++|++||+.|+.+|.++|.++|++++++|++++++|++++++|+|||..+++.|+..+++.++|++..++++.+ 
T Consensus         1 v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~   80 (429)
T cd07100           1 IEAALDRAHAAFLAWRKTSFAERAALLRKLADLLRERKDELARLITLEMGKPIAEARAEVEKCAWICRYYAENAEAFLAD   80 (429)
T ss_pred             CHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            4789999999999999999999999999999999999999999999999999999999999999999999998887643 


Q ss_pred             cccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh-------------------------------------
Q psy3652         153 SILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL-------------------------------------  195 (394)
Q Consensus       153 ~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL-------------------------------------  195 (394)
                      ...+.  ++...+++++|+|||++|+|||||+.++++++++||                                     
T Consensus        81 ~~~~~--~~~~~~~~~~P~GvV~~I~P~N~Pl~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~l~~aglP~gvv~~  158 (429)
T cd07100          81 EPIET--DAGKAYVRYEPLGVVLGIMPWNFPFWQVFRFAAPNLMAGNTVLLKHASNVPGCALAIEELFREAGFPEGVFQN  158 (429)
T ss_pred             eeccC--CCceEEEEEEeeeEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcCcEEE
Confidence            32332  134467789999999999999999999999999999                                     


Q ss_pred             ---------------------------hHHHHHh----hhhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcc
Q psy3652         196 ---------------------------VGVAVQS----RFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRC  244 (394)
Q Consensus       196 ---------------------------~g~~i~~----~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C  244 (394)
                                                 +|+.|++    ++||+++|+|||||+||++|||++.|++.+++++|.|+||.|
T Consensus       159 v~g~~~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C  238 (429)
T cd07100         159 LLIDSDQVEAIIADPRVRGVTLTGSERAGRAVAAEAGKNLKKSVLELGGSDPFIVLDDADLDKAVKTAVKGRLQNAGQSC  238 (429)
T ss_pred             EeCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCcceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCC
Confidence                                       6777765    467999999999999999999999999999999999999999


Q ss_pred             cCCceEEEecc-----------------------------------------------------c------CCCCCceec
Q psy3652         245 TTTRRLFLHKK-----------------------------------------------------K------IDRPGYFVE  265 (394)
Q Consensus       245 ~a~~rv~V~~~-----------------------------------------------------~------~~~~g~~~~  265 (394)
                      ++++|||||++                                                     .      .+..|+|++
T Consensus       239 ~a~~rv~v~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~  318 (429)
T cd07100         239 IAAKRFIVHEDVYDEFLEKFVEAMAALKVGDPMDEDTDLGPLARKDLRDELHEQVEEAVAAGATLLLGGKRPDGPGAFYP  318 (429)
T ss_pred             CCCeEEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEc
Confidence            99999999999                                                     0      011378999


Q ss_pred             CeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCC
Q psy3652         266 PTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGA  345 (394)
Q Consensus       266 Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~  345 (394)
                      |||+.+++++|++++||+||||++|++|+|.||||+++|+++|||+++|||+|.+.+++++  .++++|.|+||.+. ..
T Consensus       319 Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~--~~l~~g~v~iN~~~-~~  395 (429)
T cd07100         319 PTVLTDVTPGMPAYDEELFGPVAAVIKVKDEEEAIALANDSPFGLGGSVFTTDLERAERVA--RRLEAGMVFINGMV-KS  395 (429)
T ss_pred             CEEeecCCCCCHHHhCCCCCCeEEEeeeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHH--HhCCcCeEEECCCC-CC
Confidence            9999999999999999999999999999999999999999999999999999999999999  88999999999875 34


Q ss_pred             CCCCCccCCCCCCCCCCchHHHHHhhhheeEEE
Q psy3652         346 EIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVT  378 (394)
Q Consensus       346 ~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~  378 (394)
                      .+.+||||+|.||+|+++|.+++++|++.|+++
T Consensus       396 ~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~  428 (429)
T cd07100         396 DPRLPFGGVKRSGYGRELGRFGIREFVNIKTVW  428 (429)
T ss_pred             CCCCCcCCccccccCCcchHHHHHHhcceeEEe
Confidence            567899999999999999999999999999885

Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate.

>cd07136 ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydrogenase ywdH-like

Probab=100.00  E-value=2.8e-65  Score=514.13  Aligned_cols=304  Identities=25%  Similarity=0.352  Sum_probs=274.8

Q ss_pred             HHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCChHHhH-HHHHHHHHHHHHHHHhhhhccCc-
Q psy3652          76 RCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGI-GEVQEFIDICDYAVGLSRTYSGS-  153 (394)
Q Consensus        76 ~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~~~-  153 (394)
                      +.+++|++||+.|+.+|+.+|+++|++++++|++++++|++++++|+|||+.+++ .|+..+++.++|+++.++.+.+. 
T Consensus         2 ~~v~~a~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~   81 (449)
T cd07136           2 SLVEKQRAFFKTGATKDVEFRIEQLKKLKQAIKKYENEILEALKKDLGKSEFEAYMTEIGFVLSEINYAIKHLKKWMKPK   81 (449)
T ss_pred             hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            5688999999999999999999999999999999999999999999999999996 59999999999999988776443 


Q ss_pred             ccCCC--CCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh------------------------------------
Q psy3652         154 ILPSE--RPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL------------------------------------  195 (394)
Q Consensus       154 ~~~~~--~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL------------------------------------  195 (394)
                      ..+..  ..+...++.++|+|||++|+|||||+.+.++++++||                                    
T Consensus        82 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vi~Kps~~tp~~~~~l~~~~~~alP~gv~~~  161 (449)
T cd07136          82 RVKTPLLNFPSKSYIYYEPYGVVLIIAPWNYPFQLALAPLIGAIAAGNTAVLKPSELTPNTSKVIAKIIEETFDEEYVAV  161 (449)
T ss_pred             ccCCccccCCceeEEEEecCeEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECcccchHHHHHHHHHHHHhCCCCEEEE
Confidence            22211  1234567889999999999999999999999999999                                    


Q ss_pred             --------------------------hHHHHHh----hhhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCccc
Q psy3652         196 --------------------------VGVAVQS----RFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCT  245 (394)
Q Consensus       196 --------------------------~g~~i~~----~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~  245 (394)
                                                +|+.|++    .++|+++|||||||+||++|||+|.|++.+++++|.|+||.|+
T Consensus       162 v~g~~~~~~~L~~~~v~~V~fTGS~~~g~~i~~~aa~~~~~v~lElgGknp~iV~~dADld~aa~~i~~~~~~~~GQ~C~  241 (449)
T cd07136         162 VEGGVEENQELLDQKFDYIFFTGSVRVGKIVMEAAAKHLTPVTLELGGKSPCIVDEDANLKLAAKRIVWGKFLNAGQTCV  241 (449)
T ss_pred             EeCChHHHHHHhcCCCCEEEEECCHHHHHHHHHHHHhcCCCEEEEecCCCeEEECCCCCHHHHHHHHHHHHHcccCCccc
Confidence                                      6777765    4579999999999999999999999999999999999999999


Q ss_pred             CCceEEEecc-------------------c---------------------------------CCCCCceecCeEEEcCC
Q psy3652         246 TTRRLFLHKK-------------------K---------------------------------IDRPGYFVEPTIVTGLP  273 (394)
Q Consensus       246 a~~rv~V~~~-------------------~---------------------------------~~~~g~~~~Ptvl~~v~  273 (394)
                      +++|||||++                   .                                 .+.+|+|+.|||+.+++
T Consensus       242 a~~rv~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~gpli~~~~~~~i~~~i~~a~~~~gG~~~~~g~~~~Ptvl~~v~  321 (449)
T cd07136         242 APDYVLVHESVKEKFIKELKEEIKKFYGEDPLESPDYGRIINEKHFDRLAGLLDNGKIVFGGNTDRETLYIEPTILDNVT  321 (449)
T ss_pred             CCCEEEEcHHHHHHHHHHHHHHHHHhcCCCCCCCCCccCcCCHHHHHHHHHHHhcceEEECCCcCCCCCEEeeEEEecCC
Confidence            9999999999                   0                                 01248899999999999


Q ss_pred             CCCcccccccccceEEEEeeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCC-CCCCCCcc
Q psy3652         274 HNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNG-AEIGGAFG  352 (394)
Q Consensus       274 ~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~-~~~~~pfG  352 (394)
                      ++|.+++||+||||++|++|+|+||||+++|+++|||+++|||+|...+.+++  .++++|.|+||..+.. ..+.+|||
T Consensus       322 ~~~~~~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~--~~l~~G~v~vN~~~~~~~~~~~PfG  399 (449)
T cd07136         322 WDDPVMQEEIFGPILPVLTYDTLDEAIEIIKSRPKPLALYLFSEDKKVEKKVL--ENLSFGGGCINDTIMHLANPYLPFG  399 (449)
T ss_pred             CcChHHhccccCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHH--HhCCcceEEECCccccccCCCCCcc
Confidence            99999999999999999999999999999999999999999999999999999  8899999999976432 33678999


Q ss_pred             CCCCCCCCCCchHHHHHhhhheeEEEEec
Q psy3652         353 GEKYTGGGRESGSDSWKQYCRRSTVTINH  381 (394)
Q Consensus       353 G~~~SG~G~~~g~~~l~~f~~~k~v~~~~  381 (394)
                      |+|.||+|+++|.+++++|++.|+++++.
T Consensus       400 G~k~SG~G~~~g~~~l~~~t~~k~v~~~~  428 (449)
T cd07136         400 GVGNSGMGSYHGKYSFDTFSHKKSILKKS  428 (449)
T ss_pred             CcCcccCCcccCHHHHHHhccceEEEEcC
Confidence            99999999999999999999999998873

Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD.

>cd07135 ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins

Probab=100.00  E-value=4e-65  Score=512.73  Aligned_cols=308  Identities=23%  Similarity=0.300  Sum_probs=277.9

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCChHHhH-HHHHHHHHHHHHHHHhh
Q psy3652          69 GNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGI-GEVQEFIDICDYAVGLS  147 (394)
Q Consensus        69 a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~  147 (394)
                      .+++|+++|+++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||+.+++ .|+..+++.++|+++.+
T Consensus         2 ~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~   81 (436)
T cd07135           2 TPLDEIDSIHSRLRATFRSGKTKDLEYRLWQLKQLYWAVKDNEEAIVEALKKDLGRPPFETLLTEVSGVKNDILHMLKNL   81 (436)
T ss_pred             CCHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999999999999999999999999999997 59999999999999988


Q ss_pred             hhccCcc-cCCC---CCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh----------------------------
Q psy3652         148 RTYSGSI-LPSE---RPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL----------------------------  195 (394)
Q Consensus       148 ~~~~~~~-~~~~---~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL----------------------------  195 (394)
                      +.+.+.. ....   ..+...++.++|+|||++|+|||||+.+.++++++||                            
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~l~~l~~~~  161 (436)
T cd07135          82 KKWAKDEKVKDGPLAFMFGKPRIRKEPLGVVLIIGPWNYPVLLALSPLVGAIAAGCTVVLKPSELTPHTAALLAELVPKY  161 (436)
T ss_pred             HHhhCCcccCCcccccCCCceEEEeccCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCccChHHHHHHHHHHHHh
Confidence            7653322 2111   1233457789999999999999999999999999999                            


Q ss_pred             ----------------------------------hHHHHHh----hhhhhccccCCCCeEEEecCCCHHHHHHHHHHHhh
Q psy3652         196 ----------------------------------VGVAVQS----RFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACC  237 (394)
Q Consensus       196 ----------------------------------~g~~i~~----~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~  237 (394)
                                                        +|+.|++    .++|+++|+|||||+||++|||++.|++.+++++|
T Consensus       162 lP~g~v~vv~g~~~~~~~l~~~~vd~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~~~iV~~dADl~~aa~~i~~~~~  241 (436)
T cd07135         162 LDPDAFQVVQGGVPETTALLEQKFDKIFYTGSGRVGRIIAEAAAKHLTPVTLELGGKSPVIVTKNADLELAAKRILWGKF  241 (436)
T ss_pred             CCcCEEEEEcCCchhHHHHHhCCCCEEEEECCcHHHHHHHHHHHhcCCCeEEEccCCCcEEECCCCCHHHHHHHHHHHHh
Confidence                                              5666654    45799999999999999999999999999999999


Q ss_pred             CcCCCcccCCceEEEecc-------------------c----------------------C-------------CCCCce
Q psy3652         238 GTAGQRCTTTRRLFLHKK-------------------K----------------------I-------------DRPGYF  263 (394)
Q Consensus       238 ~~~GQ~C~a~~rv~V~~~-------------------~----------------------~-------------~~~g~~  263 (394)
                      .|+||.|++++|||||++                   .                      +             ...|+|
T Consensus       242 ~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~gpli~~~~~~~i~~~v~~ag~~v~~gg~~~~~g~~  321 (436)
T cd07135         242 GNAGQICVAPDYVLVDPSVYDEFVEELKKVLDEFYPGGANASPDYTRIVNPRHFNRLKSLLDTTKGKVVIGGEMDEATRF  321 (436)
T ss_pred             ccCCceecCCCEEeccHHHHHHHHHHHHHHHHHhcCCCCCCCCCcCCCCCHHHHHHHHHHHHhcCCeEEECCCcCCCCCE
Confidence            999999999999999999                   0                      0             023789


Q ss_pred             ecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCC
Q psy3652         264 VEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTN  343 (394)
Q Consensus       264 ~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~  343 (394)
                      +.|||+.+++++|+++++|+||||++|++|+|+||||+++|+++|||++||||+|...+++++  .++++|.|+||..+.
T Consensus       322 ~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~deai~~an~~~~gL~~~v~t~d~~~a~~~~--~~l~~g~v~iN~~~~  399 (436)
T cd07135         322 IPPTIVSDVSWDDSLMSEELFGPVLPIIKVDDLDEAIKVINSRDTPLALYIFTDDKSEIDHIL--TRTRSGGVVINDTLI  399 (436)
T ss_pred             EccEEEecCCCccHHHhccccCCceEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHH--hcCCcCeEEECCccc
Confidence            999999999999999999999999999999999999999999999999999999999999999  889999999997643


Q ss_pred             C-CCCCCCccCCCCCCCCCCchHHHHHhhhheeEEE
Q psy3652         344 G-AEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVT  378 (394)
Q Consensus       344 ~-~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~  378 (394)
                      . ..+.+||||+|.||+|+++|.+++++|++.|++.
T Consensus       400 ~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~i~  435 (436)
T cd07135         400 HVGVDNAPFGGVGDSGYGAYHGKYGFDTFTHERTVV  435 (436)
T ss_pred             cccCCCCCcCCcCcccCCccccHhHHHHhccccccc
Confidence            3 3567899999999999999999999999999873

Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD.

>cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like

Probab=100.00  E-value=4.7e-65  Score=513.14  Aligned_cols=305  Identities=28%  Similarity=0.418  Sum_probs=278.2

Q ss_pred             HHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccC
Q psy3652          73 DYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSG  152 (394)
Q Consensus        73 ~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~  152 (394)
                      |+++++++|++||+.|+.+|.++|.++|++++++|+++.++|++++++|+|||..++..|+..+++.++++++..+.+.+
T Consensus         1 ~v~~ai~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~ei~~~~~~l~~~~~~~~~~~~   80 (432)
T cd07105           1 DADQAVEAAAAAFPAWSKTPPSERRDILLKAADLLESRRDEFIEAMMEETGATAAWAGFNVDLAAGMLREAASLITQIIG   80 (432)
T ss_pred             CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            57899999999999999999999999999999999999999999999999999988888999999999999998877644


Q ss_pred             cccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh-------------------------------------
Q psy3652         153 SILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL-------------------------------------  195 (394)
Q Consensus       153 ~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL-------------------------------------  195 (394)
                      ...+....+...++.++|+|||++|+|||||+.+.++++++||                                     
T Consensus        81 ~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~~~~aGlP~gv~~~  160 (432)
T cd07105          81 GSIPSDKPGTLAMVVKEPVGVVLGIAPWNAPVILGTRAIAYPLAAGNTVVLKASELSPRTHWLIGRVFHEAGLPKGVLNV  160 (432)
T ss_pred             eecccCCCCceeEEEEecceEEEEECCcCcHHHHHHHHHHHHHhcCCEEEEECCccChHHHHHHHHHHHHcCcCCCcEEE
Confidence            4444322344567889999999999999999999999999998                                     


Q ss_pred             -------------------------------hHHHHHh----hhhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcC
Q psy3652         196 -------------------------------VGVAVQS----RFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTA  240 (394)
Q Consensus       196 -------------------------------~g~~i~~----~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~  240 (394)
                                                     +|+.|++    +++|+++|+|||||+||++|||++.|++.+++++|.|+
T Consensus       161 v~g~~~~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElgGk~p~iV~~dadl~~aa~~i~~~~~~~~  240 (432)
T cd07105         161 VTHSPEDAPEVVEALIAHPAVRKVNFTGSTRVGRIIAETAAKHLKPVLLELGGKAPAIVLEDADLDAAANAALFGAFLNS  240 (432)
T ss_pred             EeCCCCchHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEeCCCCCceEECCCCCHHHHHHHHHHHHHhcC
Confidence                                           5666654    46799999999999999999999999999999999999


Q ss_pred             CCcccCCceEEEecc------------------------------------------------c-----CC--CCCceec
Q psy3652         241 GQRCTTTRRLFLHKK------------------------------------------------K-----ID--RPGYFVE  265 (394)
Q Consensus       241 GQ~C~a~~rv~V~~~------------------------------------------------~-----~~--~~g~~~~  265 (394)
                      ||.|+++++||||++                                                .     ..  ..|+|+.
T Consensus       241 GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~gp~i~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~~~~~~~  320 (432)
T cd07105         241 GQICMSTERIIVHESIADEFVEKLKAAAEKLFAGPVVLGSLVSAAAADRVKELVDDALSKGAKLVVGGLADESPSGTSMP  320 (432)
T ss_pred             CCCCcCCceEEEcHHHHHHHHHHHHHHHHhhcCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCeEEe
Confidence            999999999999998                                                0     00  2478999


Q ss_pred             CeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCC
Q psy3652         266 PTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGA  345 (394)
Q Consensus       266 Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~  345 (394)
                      |||+.+++++|++++||+||||++|++|+|.||||+++|+++|||++||||+|.+.+++++  .++++|.|+||.++...
T Consensus       321 Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~~~~~~--~~l~~g~v~vN~~~~~~  398 (432)
T cd07105         321 PTILDNVTPDMDIYSEESFGPVVSIIRVKDEEEAVRIANDSEYGLSAAVFTRDLARALAVA--KRIESGAVHINGMTVHD  398 (432)
T ss_pred             eEEEecCCCCCHHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHH--HhCCcCeEEECCCCCCC
Confidence            9999999999999999999999999999999999999999999999999999999999999  88999999999876555


Q ss_pred             CCCCCccCCCCCCCCCCchHHHHHhhhheeEEEE
Q psy3652         346 EIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTI  379 (394)
Q Consensus       346 ~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~  379 (394)
                      .+.+||||+|.||+|+++|.+++++|++.|++++
T Consensus       399 ~~~~PfgG~~~SG~G~~~g~~~l~~~~~~k~v~~  432 (432)
T cd07105         399 EPTLPHGGVKSSGYGRFNGKWGIDEFTETKWITI  432 (432)
T ss_pred             CCCCCCCCcccccccccChHHHHHHhhceEEEeC
Confidence            5779999999999999999999999999999863

Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD.

>cd07095 ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like

Probab=100.00  E-value=1.1e-64  Score=509.31  Aligned_cols=300  Identities=30%  Similarity=0.472  Sum_probs=271.4

Q ss_pred             HHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccC
Q psy3652          73 DYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSG  152 (394)
Q Consensus        73 ~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~  152 (394)
                      |++++|++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..++..|+..+++.+++++.....+.+
T Consensus         1 ~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~ev~~~~~~~~~~~~~~~~~~~   80 (431)
T cd07095           1 QVDAAVAAARAAFPGWAALSLEERAAILRRFAELLKANKEELARLISRETGKPLWEAQTEVAAMAGKIDISIKAYHERTG   80 (431)
T ss_pred             CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            57899999999999999999999999999999999999999999999999999999999999999999999988777655


Q ss_pred             cccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh-------------------------------------
Q psy3652         153 SILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL-------------------------------------  195 (394)
Q Consensus       153 ~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL-------------------------------------  195 (394)
                      ...... ++...++.++|+|||++|+|||||+.+.++++++||                                     
T Consensus        81 ~~~~~~-~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VI~Kps~~~~~~~~~l~~~~~~ag~P~g~~~~  159 (431)
T cd07095          81 ERATPM-AQGRAVLRHRPHGVMAVFGPFNFPGHLPNGHIVPALLAGNTVVFKPSELTPAVAELMVELWEEAGLPPGVLNL  159 (431)
T ss_pred             CcccCC-CCceEEEEEecceEEEEECCCchHHHHHHHHHHHHHhcCCEEEeeCCCCCcHHHHHHHHHHHHhCcChhHheE
Confidence            433222 345567889999999999999999999999999999                                     


Q ss_pred             ---------------------------hHHHHHhh-----hhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCc
Q psy3652         196 ---------------------------VGVAVQSR-----FGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQR  243 (394)
Q Consensus       196 ---------------------------~g~~i~~~-----~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~  243 (394)
                                                 +|+.|++.     .+++++|+|||||+||++|||++.|++.+++++|.|+||.
T Consensus       160 v~g~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~lElgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~  239 (431)
T cd07095         160 VQGGRETGEALAAHEGIDGLLFTGSAATGLLLHRQFAGRPGKILALEMGGNNPLVVWDVADIDAAAYLIVQSAFLTAGQR  239 (431)
T ss_pred             EeCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhhccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence                                       67777652     4678999999999999999999999999999999999999


Q ss_pred             ccCCceEEEecc------------------------------------------------------------cCCCCCce
Q psy3652         244 CTTTRRLFLHKK------------------------------------------------------------KIDRPGYF  263 (394)
Q Consensus       244 C~a~~rv~V~~~------------------------------------------------------------~~~~~g~~  263 (394)
                      |++++|||||++                                                            ..+.+|+|
T Consensus       240 C~a~~rv~V~~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~v~~a~~~ga~~l~gg~~~~~~g~~  319 (431)
T cd07095         240 CTCARRLIVPDGAVGDAFLERLVEAAKRLRIGAPDAEPPFMGPLIIAAAAARYLLAQQDLLALGGEPLLAMERLVAGTAF  319 (431)
T ss_pred             CCCCeEEEEcCcchHHHHHHHHHHHHHhCCCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCEEEeCCCcCCCCCeE
Confidence            999999999997                                                            01125889


Q ss_pred             ecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCC
Q psy3652         264 VEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTN  343 (394)
Q Consensus       264 ~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~  343 (394)
                      +.|||+ +++++|.+++||+||||++|++|+|++|||+++|+++|||++||||+|..++++++  .++++|.|+||.++.
T Consensus       320 ~~Ptv~-~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~a~~~~--~~l~~G~v~iN~~~~  396 (431)
T cd07095         320 LSPGII-DVTDAADVPDEEIFGPLLQVYRYDDFDEAIALANATRFGLSAGLLSDDEALFERFL--ARIRAGIVNWNRPTT  396 (431)
T ss_pred             EcCEEE-ecCCCChHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHH--HhCCcceEEECCCCC
Confidence            999999 69999999999999999999999999999999999999999999999999999999  889999999998765


Q ss_pred             CCCCCCCccCCCCCCCCCCchHHHHHhhhheeEE
Q psy3652         344 GAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTV  377 (394)
Q Consensus       344 ~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v  377 (394)
                      ...+.+||||+|.||+|+++|.++++ |++.|++
T Consensus       397 ~~~~~~PfGG~k~SG~G~~~g~~~~~-~~~~~~~  429 (431)
T cd07095         397 GASSTAPFGGVGLSGNHRPSAYYAAD-YCAYPVA  429 (431)
T ss_pred             CCCCCCCCCCcccccCCCCChHHHHH-HHhhhhc
Confidence            56667899999999999999999999 5555544

N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate.

>PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

Probab=100.00  E-value=5e-64  Score=543.20  Aligned_cols=335  Identities=28%  Similarity=0.434  Sum_probs=300.1

Q ss_pred             ceeCCeeccCCCeeeeecCCCCC-eEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHH
Q psy3652          39 VYDGTSWKANGEIIPSINPSTGE-TIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQL  117 (394)
Q Consensus        39 ~~i~G~~~~~~~~~~v~nP~tg~-~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~  117 (394)
                      .+|||    ++.+++++||+|++ ++++++.++.+++++||++|++||+.|+.+|.++|+++|++++++|++++++|+.+
T Consensus       555 ~~i~g----~~~~~~v~nP~~~~~~vg~v~~a~~~~v~~Ai~aA~~A~~~W~~~~~~~Ra~iL~kaAdll~~~~~eL~~l  630 (1038)
T PRK11904        555 PIING----EGEARPVVSPADRRRVVGEVAFADAEQVEQALAAARAAFPAWSRTPVEERAAILERAADLLEANRAELIAL  630 (1038)
T ss_pred             ceEcC----CCCeEEEECCCCCCeeEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence            45666    56789999999988 99999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCcccC-CCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh-
Q psy3652         118 VSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILP-SERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL-  195 (394)
Q Consensus       118 ~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~-~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL-  195 (394)
                      +++|+|||+.++..|+..++++++||+..++++.+...+ ....+......++|+|||++|+|||||+.+.++++++|| 
T Consensus       631 ~~~E~GK~~~~a~~EV~eaid~lr~ya~~a~~~~~~~~~l~g~~ge~n~~~~~P~GVv~~IsPwNfPlai~~~~i~aALa  710 (1038)
T PRK11904        631 CVREAGKTLQDAIAEVREAVDFCRYYAAQARRLFGAPEKLPGPTGESNELRLHGRGVFVCISPWNFPLAIFLGQVAAALA  710 (1038)
T ss_pred             HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccCCCCCceeEEEEecceEEEEECCCccHHHHHHHHHHHHHH
Confidence            999999999999999999999999999998876543211 112345567789999999999999999999999999998 


Q ss_pred             ----------------------------------------------------------------hHHHHHhh-------h
Q psy3652         196 ----------------------------------------------------------------VGVAVQSR-------F  204 (394)
Q Consensus       196 ----------------------------------------------------------------~g~~i~~~-------~  204 (394)
                                                                                      +|+.|.+.       .
T Consensus       711 aGNtVIlKPse~tpl~a~~l~~ll~eAGlP~gvl~lv~G~g~~vg~~Lv~~p~v~~V~FTGS~~~g~~I~~~~A~~~g~~  790 (1038)
T PRK11904        711 AGNTVIAKPAEQTPLIAAEAVKLLHEAGIPKDVLQLLPGDGATVGAALTADPRIAGVAFTGSTETARIINRTLAARDGPI  790 (1038)
T ss_pred             cCCEEEeeCCCcCHHHHHHHHHHHHHhCcCcceEEEeeCCchHHHHHHhcCCCcCeEEEECCHHHHHHHHHHHhhccCCC
Confidence                                                                            66666542       4


Q ss_pred             hhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc-----------------------------
Q psy3652         205 GKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK-----------------------------  255 (394)
Q Consensus       205 ~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~-----------------------------  255 (394)
                      +|+++|+|||||+||++|||+|.|++.+++|+|.++||.|+++++||||++                             
T Consensus       791 ~pvi~ElGGkNa~IV~~dAdld~Av~~iv~saF~~aGQ~CsA~~rl~V~~si~d~fl~~L~~~~~~l~vGdp~d~~t~~G  870 (1038)
T PRK11904        791 VPLIAETGGQNAMIVDSTALPEQVVDDVVTSAFRSAGQRCSALRVLFVQEDIADRVIEMLKGAMAELKVGDPRLLSTDVG  870 (1038)
T ss_pred             ceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEeHHHHHHHHHHHHHHHHhccCCCcccccCCcc
Confidence            589999999999999999999999999999999999999999999999999                             


Q ss_pred             ----------------------------cCC---CCCceecCeEEEcCCCCCcccccccccceEEEEeeC--CHHHHHHH
Q psy3652         256 ----------------------------KID---RPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFD--SLDEAITW  302 (394)
Q Consensus       256 ----------------------------~~~---~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~--~~~eAi~~  302 (394)
                                                  ..+   ..|+|+.|||+.  .+++.+++||+||||++|++|+  ++||||++
T Consensus       871 PvI~~~a~~~l~~~I~~a~~ga~vl~gg~~~~~~~~G~fv~PTvi~--~~~~~~~~eEiFGPVL~V~~~~~~~ldeaI~~  948 (1038)
T PRK11904        871 PVIDAEAKANLDAHIERMKREARLLAQLPLPAGTENGHFVAPTAFE--IDSISQLEREVFGPILHVIRYKASDLDKVIDA  948 (1038)
T ss_pred             CCCCHHHHHHHHHHHHHHHcCCEEEeCCCCCCCCCCceEEeeEEEc--cCCcHHhCCCCcCcEEEEEEeCCCCHHHHHHH
Confidence                                        001   148999999995  3578889999999999999998  69999999


Q ss_pred             HhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCC-CCccCCCCCCCC-CCchHHHHHhhhheeEEEEe
Q psy3652         303 NNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIG-GAFGGEKYTGGG-RESGSDSWKQYCRRSTVTIN  380 (394)
Q Consensus       303 ~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~-~pfGG~~~SG~G-~~~g~~~l~~f~~~k~v~~~  380 (394)
                      +|+++|||+++|||+|.+.+++++  .++++|+|+||..+.+...+ .||||+|.||+| +.+|++++.+|++.|+|+++
T Consensus       949 iN~t~yGLt~~IfS~d~~~~~~~~--~~l~aG~vyIN~~~~ga~vg~qPFGG~~~SG~G~kaGG~~~L~~f~~~ktv~~~ 1026 (1038)
T PRK11904        949 INATGYGLTLGIHSRIEETADRIA--DRVRVGNVYVNRNQIGAVVGVQPFGGQGLSGTGPKAGGPHYLLRFATEKTVTVN 1026 (1038)
T ss_pred             HhCCCCCCEEEEEcCCHHHHHHHH--HhCCEEEEEEeCCCccCCCCCCCCCCCCCCCCCCccchHHHHHHHhceEEEEEc
Confidence            999999999999999999999999  88999999999876555433 699999999999 67899999999999999887


Q ss_pred             c
Q psy3652         381 H  381 (394)
Q Consensus       381 ~  381 (394)
                      .
T Consensus      1027 ~ 1027 (1038)
T PRK11904       1027 T 1027 (1038)
T ss_pred             c
Confidence            5

>cd07132 ALDH_F3AB Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins

Probab=100.00  E-value=1.9e-64  Score=509.15  Aligned_cols=305  Identities=21%  Similarity=0.300  Sum_probs=274.9

Q ss_pred             HHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCChHHhH-HHHHHHHHHHHHHHHhhhhccCcc
Q psy3652          76 RCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGI-GEVQEFIDICDYAVGLSRTYSGSI  154 (394)
Q Consensus        76 ~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~~~~  154 (394)
                      +|+++|++||+.|+.+|..+|.++|++++++|++++++|++++++|+|||+.++. .|+..+++.++++++.++.+.+..
T Consensus         2 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~   81 (443)
T cd07132           2 EAVRRAREAFSSGKTRPLEFRIQQLEALLRMLEENEDEIVEALAKDLRKPKFEAVLSEILLVKNEIKYAISNLPEWMKPE   81 (443)
T ss_pred             hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence            5889999999999999999999999999999999999999999999999999996 699999999999998877764332


Q ss_pred             cCCC---CCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh------------------------------------
Q psy3652         155 LPSE---RPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL------------------------------------  195 (394)
Q Consensus       155 ~~~~---~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL------------------------------------  195 (394)
                      .+..   ......++.++|+|||++|+|||||+.+.++++++||                                    
T Consensus        82 ~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~~lp~gv~~v  161 (443)
T cd07132          82 PVKKNLATLLDDVYIYKEPLGVVLIIGAWNYPLQLTLVPLVGAIAAGNCVVIKPSEVSPATAKLLAELIPKYLDKECYPV  161 (443)
T ss_pred             cCCCccccCCCceEEEEecccEEEEEcCCchhHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHhCCcCeEEE
Confidence            2111   1123457789999999999999999999999999999                                    


Q ss_pred             --------------------------hHHHHHh----hhhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCccc
Q psy3652         196 --------------------------VGVAVQS----RFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCT  245 (394)
Q Consensus       196 --------------------------~g~~i~~----~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~  245 (394)
                                                +|+.|++    +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+
T Consensus       162 v~g~~~~~~~l~~~~vd~V~fTGs~~~g~~i~~~a~~~~~~~~lElgG~~p~iV~~dADl~~aa~~i~~~~f~~~GQ~C~  241 (443)
T cd07132         162 VLGGVEETTELLKQRFDYIFYTGSTSVGKIVMQAAAKHLTPVTLELGGKSPCYVDKSCDIDVAARRIAWGKFINAGQTCI  241 (443)
T ss_pred             EeCCHHHHHHHHhCCCCEEEEECChHHHHHHHHHHHhhCCceEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCcee
Confidence                                      6676654    4689999999999999999999999999999999999999999


Q ss_pred             CCceEEEecc-----------------c-----------------------------------CCCCCceecCeEEEcCC
Q psy3652         246 TTRRLFLHKK-----------------K-----------------------------------IDRPGYFVEPTIVTGLP  273 (394)
Q Consensus       246 a~~rv~V~~~-----------------~-----------------------------------~~~~g~~~~Ptvl~~v~  273 (394)
                      +++|||||++                 .                                   .+..|+|+.|||+.+++
T Consensus       242 a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~v~~~i~~a~~~~gg~~~~~~~~~~Ptvl~~v~  321 (443)
T cd07132         242 APDYVLCTPEVQEKFVEALKKTLKEFYGEDPKESPDYGRIINDRHFQRLKKLLSGGKVAIGGQTDEKERYIAPTVLTDVK  321 (443)
T ss_pred             CCcEEEEcHHHHHHHHHHHHHHHHHhcCCCCCcccccCCcCCHHHHHHHHHHHhCCEEEeCCccCCCCCEEeeEEEeCCC
Confidence            9999999999                 0                                   11248899999999999


Q ss_pred             CCCcccccccccceEEEEeeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCC-CCCCCcc
Q psy3652         274 HNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGA-EIGGAFG  352 (394)
Q Consensus       274 ~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~-~~~~pfG  352 (394)
                      ++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.+.+++  .++++|.|+||...... .+.+|||
T Consensus       322 ~~~~~~~eE~FgPvl~v~~~~~~~eai~~an~~~~gL~a~i~t~d~~~~~~~~--~~l~~G~v~IN~~~~~~~~~~~PfG  399 (443)
T cd07132         322 PSDPVMQEEIFGPILPIVTVNNLDEAIEFINSREKPLALYVFSNNKKVINKIL--SNTSSGGVCVNDTIMHYTLDSLPFG  399 (443)
T ss_pred             CCChHHhccccCceeEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHH--HhCCcceEEECCcccccCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999  88999999999865333 3568999


Q ss_pred             CCCCCCCCCCchHHHHHhhhheeEEEEecC
Q psy3652         353 GEKYTGGGRESGSDSWKQYCRRSTVTINHG  382 (394)
Q Consensus       353 G~~~SG~G~~~g~~~l~~f~~~k~v~~~~~  382 (394)
                      |+|.||+|+++|.+++++|++.|++++++.
T Consensus       400 G~k~SG~G~~~g~~~l~~~~~~k~v~~~~~  429 (443)
T cd07132         400 GVGNSGMGAYHGKYSFDTFSHKRSCLVKSL  429 (443)
T ss_pred             CCCcccCCCcccHHHHHHhccccEEEEccc
Confidence            999999999999999999999999988864

NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes.

>cd07104 ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins

Probab=100.00  E-value=2.9e-64  Score=507.89  Aligned_cols=304  Identities=34%  Similarity=0.560  Sum_probs=278.3

Q ss_pred             HHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccC
Q psy3652          73 DYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSG  152 (394)
Q Consensus        73 ~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~  152 (394)
                      |+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..++..|+..+++.+++++...++..+
T Consensus         1 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~ei~~~~~~l~~~~~~~~~~~~   80 (431)
T cd07104           1 DVDRAYAAAAAAQKAWAATPPQERAAILRKAAEILEERRDEIADWLIRESGSTRPKAAFEVGAAIAILREAAGLPRRPEG   80 (431)
T ss_pred             CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            58899999999999999999999999999999999999999999999999999999999999999999999988776655


Q ss_pred             cccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh-------------------------------------
Q psy3652         153 SILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL-------------------------------------  195 (394)
Q Consensus       153 ~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL-------------------------------------  195 (394)
                      ...+....+...+..++|+|||++|+|||||+.+.++++++||                                     
T Consensus        81 ~~~~~~~~g~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~l~~~l~~aGlP~gvv~  160 (431)
T cd07104          81 EILPSDVPGKESMVRRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDSRTPVTGGLLIAEIFEEAGLPKGVLN  160 (431)
T ss_pred             ccccCCCCCceeEEEEeeeeeEEEECCCCcHHHHHHHHHHHHHHcCCeEEeeCCCCChHHHHHHHHHHHHHcCCCcccEE
Confidence            4444322345567889999999999999999999999999999                                     


Q ss_pred             -----------------------------hHHHHHh----hhhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCC
Q psy3652         196 -----------------------------VGVAVQS----RFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQ  242 (394)
Q Consensus       196 -----------------------------~g~~i~~----~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ  242 (394)
                                                   +|+.|++    +++|+++|+|||||+||++|||++.|++.+++++|.|+||
T Consensus       161 ~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ  240 (431)
T cd07104         161 VVPGGGSEIGDALVEHPRVRMISFTGSTAVGRHIGELAGRHLKKVALELGGNNPLIVLDDADLDLAVSAAAFGAFLHQGQ  240 (431)
T ss_pred             EeeCCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence                                         6666654    5679999999999999999999999999999999999999


Q ss_pred             cccCCceEEEecc-----------------------------------------------------cC---CCCCceecC
Q psy3652         243 RCTTTRRLFLHKK-----------------------------------------------------KI---DRPGYFVEP  266 (394)
Q Consensus       243 ~C~a~~rv~V~~~-----------------------------------------------------~~---~~~g~~~~P  266 (394)
                      .|++++|||||++                                                     .+   ..+|+|+.|
T Consensus       241 ~C~a~~~v~v~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~G~~~~~gg~~~g~~~~P  320 (431)
T cd07104         241 ICMAAGRILVHESVYDEFVEKLVAKAKALPVGDPRDPDTVIGPLINERQVDRVHAIVEDAVAAGARLLTGGTYEGLFYQP  320 (431)
T ss_pred             CcccCcEEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCceECC
Confidence            9999999999999                                                     00   124789999


Q ss_pred             eEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCC
Q psy3652         267 TIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAE  346 (394)
Q Consensus       267 tvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~  346 (394)
                      ||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.+++  .++++|.|+||+++....
T Consensus       321 tvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~--~~l~~g~v~iN~~~~~~~  398 (431)
T cd07104         321 TVLSDVTPDMPIFREEIFGPVAPVIPFDDDEEAVELANDTEYGLSAAVFTRDLERAMAFA--ERLETGMVHINDQTVNDE  398 (431)
T ss_pred             EEeecCCCCChhhhCcCcCCeEEEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHH--HhcCcCeEEECCCCCCCC
Confidence            999999999999999999999999999999999999999999999999999999999999  889999999999765555


Q ss_pred             CCCCccCCCCCCCCCCchHHHHHhhhheeEEE
Q psy3652         347 IGGAFGGEKYTGGGRESGSDSWKQYCRRSTVT  378 (394)
Q Consensus       347 ~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~  378 (394)
                      +.+||||+|.||+|+++|++++++|++.|+++
T Consensus       399 ~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~~~  430 (431)
T cd07104         399 PHVPFGGVKASGGGRFGGPASLEEFTEWQWIT  430 (431)
T ss_pred             CCCCCCCcccccCCccchHHHHHHhhceeEEe
Confidence            77999999999999999999999999999985

ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences.

>cd07137 ALDH_F3FHI Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins

Probab=100.00  E-value=3.1e-64  Score=505.72  Aligned_cols=301  Identities=23%  Similarity=0.308  Sum_probs=270.0

Q ss_pred             HHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCChHHhH-HHHHHHHHHHHHHHHhhhhccCcc
Q psy3652          76 RCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGI-GEVQEFIDICDYAVGLSRTYSGSI  154 (394)
Q Consensus        76 ~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~~~~  154 (394)
                      +++++|++||+.|+.+|.++|.++|++++++|++++++|++++++|+|||+.++. .|+..+++.++|++..+..+.+..
T Consensus         3 ~a~~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~   82 (432)
T cd07137           3 RLVRELRETFRSGRTRSAEWRKSQLKGLLRLVDENEDDIFAALRQDLGKPSAESFRDEVSVLVSSCKLAIKELKKWMAPE   82 (432)
T ss_pred             HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence            5899999999999999999999999999999999999999999999999999986 599999999999998876644321


Q ss_pred             ---cCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh------------------------------------
Q psy3652         155 ---LPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL------------------------------------  195 (394)
Q Consensus       155 ---~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL------------------------------------  195 (394)
                         .+........++.++|+|||++|+|||||+.+.++++++||                                    
T Consensus        83 ~~~~~~~~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~~~~~~P~gvv~~  162 (432)
T cd07137          83 KVKTPLTTFPAKAEIVSEPLGVVLVISAWNFPFLLSLEPVIGAIAAGNAVVLKPSELAPATSALLAKLIPEYLDTKAIKV  162 (432)
T ss_pred             ccCCCcccCCceeEEEEecCcEEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCCcChHHHHHHHHHHHHhCCcCeEEE
Confidence               11111123456789999999999999999999999999999                                    


Q ss_pred             --------------------------hHHHHHh----hhhhhccccCCCCeEEEecCCCHHHHHHHHHHHhh-CcCCCcc
Q psy3652         196 --------------------------VGVAVQS----RFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACC-GTAGQRC  244 (394)
Q Consensus       196 --------------------------~g~~i~~----~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~-~~~GQ~C  244 (394)
                                                +|+.|++    +++|+++|+|||||+||++|||++.|++.+++++| .|+||.|
T Consensus       163 v~g~~~~~~~L~~~~i~~v~fTGs~~~g~~v~~~aa~~~~~~~lElgG~np~iV~~dAdl~~aa~~i~~~~f~~~~GQ~C  242 (432)
T cd07137         163 IEGGVPETTALLEQKWDKIFFTGSPRVGRIIMAAAAKHLTPVTLELGGKCPVIVDSTVDLKVAVRRIAGGKWGCNNGQAC  242 (432)
T ss_pred             EeCCHHHHHHHHhCCCCEEEEECChHHHHHHHHHHHhcCCcEEEEccCCCcEEEcCCCCHHHHHHHHHHHhhhccCCCcc
Confidence                                      6666654    46899999999999999999999999999999999 5999999


Q ss_pred             cCCceEEEecc----------------c----------------------------------------CCCCCceecCeE
Q psy3652         245 TTTRRLFLHKK----------------K----------------------------------------IDRPGYFVEPTI  268 (394)
Q Consensus       245 ~a~~rv~V~~~----------------~----------------------------------------~~~~g~~~~Ptv  268 (394)
                      ++++|+|||++                .                                        .+..|+|+.|||
T Consensus       243 ~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~gpli~~~~~~~v~~~i~~a~~ga~~l~gg~~~~~g~~~~Ptv  322 (432)
T cd07137         243 IAPDYVLVEESFAPTLIDALKNTLEKFFGENPKESKDLSRIVNSHHFQRLSRLLDDPSVADKIVHGGERDEKNLYIEPTI  322 (432)
T ss_pred             cCCCEEEEcHHHHHHHHHHHHHHHHHHhCCCCCccCCcCCcCCHHHHHHHHHHHHHHHhCCeEEeCCCcCCCCCEEeeEE
Confidence            99999999999                0                                        012488999999


Q ss_pred             EEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCC-CCC
Q psy3652         269 VTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNG-AEI  347 (394)
Q Consensus       269 l~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~-~~~  347 (394)
                      +.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.+++++  .++++|.|+||.++.. ..+
T Consensus       323 l~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~a~~~~--~~l~~G~v~iN~~~~~~~~~  400 (432)
T cd07137         323 LLDPPLDSSIMTEEIFGPLLPIITVKKIEESIEIINSRPKPLAAYVFTKNKELKRRIV--AETSSGGVTFNDTVVQYAID  400 (432)
T ss_pred             EecCCCcchhhhcccccCceEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHH--HhCCcCcEEECCccccccCC
Confidence            9999999999999999999999999999999999999999999999999999999999  8899999999986432 346


Q ss_pred             CCCccCCCCCCCCCCchHHHHHhhhheeEEE
Q psy3652         348 GGAFGGEKYTGGGRESGSDSWKQYCRRSTVT  378 (394)
Q Consensus       348 ~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~  378 (394)
                      .+||||+|.||+|+++|.+++++|++.|+++
T Consensus       401 ~~PfGG~k~SG~G~~~g~~~l~~f~~~k~v~  431 (432)
T cd07137         401 TLPFGGVGESGFGAYHGKFSFDAFSHKKAVL  431 (432)
T ss_pred             CCCCCCcCcCcCCccccHHHHHHhccCceee
Confidence            7899999999999999999999999999875

Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress.

>cd07133 ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-like

Probab=100.00  E-value=1.4e-63  Score=501.88  Aligned_cols=300  Identities=25%  Similarity=0.340  Sum_probs=268.2

Q ss_pred             HHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCC-hHHhH-HHHHHHHHHHHHHHHhhhhccCcc
Q psy3652          77 CIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKI-LAEGI-GEVQEFIDICDYAVGLSRTYSGSI  154 (394)
Q Consensus        77 av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~-~~~a~-~ev~~~~~~l~~~a~~~~~~~~~~  154 (394)
                      .+++|++||+.|+.+|+.+|.++|+++++.|++++++|++++++|+||+ ..++. .|+..+++.++|+++.+..+.+..
T Consensus         3 ~~~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~ea~~~ev~~~i~~~~~~~~~~~~~~~~~   82 (434)
T cd07133           3 LLERQKAAFLANPPPSLEERRDRLDRLKALLLDNQDALAEAISADFGHRSRHETLLAEILPSIAGIKHARKHLKKWMKPS   82 (434)
T ss_pred             HHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence            5788999999999999999999999999999999999999999999985 56774 699999999999998876644332


Q ss_pred             c-CCC--CCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh------------------------------------
Q psy3652         155 L-PSE--RPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL------------------------------------  195 (394)
Q Consensus       155 ~-~~~--~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL------------------------------------  195 (394)
                      . ...  ..+...++.++|+|||++|+|||||+.++++++++||                                    
T Consensus        83 ~~~~~~~~~~~~~~~~~~P~Gvv~~I~pwN~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~l~~~alP~g~~~~  162 (434)
T cd07133          83 RRHVGLLFLPAKAEVEYQPLGVVGIIVPWNYPLYLALGPLIAALAAGNRVMIKPSEFTPRTSALLAELLAEYFDEDEVAV  162 (434)
T ss_pred             ccCCccccCCCceEEEEecccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHhCCcCeEEE
Confidence            1 111  1233467889999999999999999999999999999                                    


Q ss_pred             --------------------------hHHHHHh----hhhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCccc
Q psy3652         196 --------------------------VGVAVQS----RFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCT  245 (394)
Q Consensus       196 --------------------------~g~~i~~----~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~  245 (394)
                                                +|+.+++    +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+
T Consensus       163 v~g~~~~~~~l~~~~v~~V~ftGs~~~g~~v~~~aa~~~~~~~lElgGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~  242 (434)
T cd07133         163 VTGGADVAAAFSSLPFDHLLFTGSTAVGRHVMRAAAENLTPVTLELGGKSPAIIAPDADLAKAAERIAFGKLLNAGQTCV  242 (434)
T ss_pred             EeCChHHHHHHHhCCCCEEEEeCchHHHHHHHHHHHhcCceEEEEccCCCcEEEeCCCCHHHHHHHHHHHHhccCCCccc
Confidence                                      6666655    4679999999999999999999999999999999999999999


Q ss_pred             CCceEEEecc---------------------------------------------------cC------C--CCCceecC
Q psy3652         246 TTRRLFLHKK---------------------------------------------------KI------D--RPGYFVEP  266 (394)
Q Consensus       246 a~~rv~V~~~---------------------------------------------------~~------~--~~g~~~~P  266 (394)
                      +++|||||++                                                   .+      +  ..|+|+.|
T Consensus       243 a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~P  322 (434)
T cd07133         243 APDYVLVPEDKLEEFVAAAKAAVAKMYPTLADNPDYTSIINERHYARLQGLLEDARAKGARVIELNPAGEDFAATRKLPP  322 (434)
T ss_pred             CCCEEEEcHHHHHHHHHHHHHHHHHhcCCCCCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCcCCCCCcEEee
Confidence            9999999998                                                   00      0  24789999


Q ss_pred             eEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCC-CCC
Q psy3652         267 TIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPT-NGA  345 (394)
Q Consensus       267 tvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~-~~~  345 (394)
                      ||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++  .++++|.|+||.+. ...
T Consensus       323 tvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~--~~l~~G~v~iN~~~~~~~  400 (434)
T cd07133         323 TLVLNVTDDMRVMQEEIFGPILPILTYDSLDEAIDYINARPRPLALYYFGEDKAEQDRVL--RRTHSGGVTINDTLLHVA  400 (434)
T ss_pred             EEEeCCCCCCcccccccCCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHH--HhCCcceEEECCcccccC
Confidence            999999999999999999999999999999999999999999999999999999999999  88999999999864 234


Q ss_pred             CCCCCccCCCCCCCCCCchHHHHHhhhheeEEE
Q psy3652         346 EIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVT  378 (394)
Q Consensus       346 ~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~  378 (394)
                      ++.+||||+|.||+|+++|.+++++|++.|+++
T Consensus       401 ~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~  433 (434)
T cd07133         401 QDDLPFGGVGASGMGAYHGKEGFLTFSHAKPVF  433 (434)
T ss_pred             CCCCCcCCCCcccCCCcCCHHHHHHhcccceec
Confidence            467899999999999999999999999999874

Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD.

>KOG2452|consensus

Probab=100.00  E-value=4.6e-65  Score=484.81  Aligned_cols=354  Identities=27%  Similarity=0.505  Sum_probs=320.8

Q ss_pred             hhhhcCCCCCCCCCceeCCeec--cCCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHH--hhcCChhhHHHHH
Q psy3652          25 FLKELGLSGSVNPGVYDGTSWK--ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAA--WAALPAPRRGEIV  100 (394)
Q Consensus        25 ~~~~~~~~~~~~~~~~i~G~~~--~~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~--w~~~~~~~R~~~L  100 (394)
                      +++-.+.....+...||+|+++  +++.++..+||.|+++|++++.++..||++|+++|+.||+.  |.+++..+|.+.|
T Consensus       410 ~~~vn~~~~~~ph~~fi~g~fv~~~~~~t~~tinp~~~~~ic~~~la~v~dvd~av~aak~afe~g~w~~~sar~rg~~~  489 (881)
T KOG2452|consen  410 EMAVNKRTVRMPHQLFIGGEFVDAEGAKTSETINPTDGSVICQVSLAQVTDVDKAVAAAKGAFENGRWGKISARDRGRLM  489 (881)
T ss_pred             eeeeccceecCcHhhccCcEeecccCCccccccCCCCCCeeEEeehhHhhhHHHHHHHHhhhhhcCcccccchhhhhhhh
Confidence            3443333323356789999998  46789999999999999999999999999999999999975  9999999999999


Q ss_pred             HHHHHHHhhCHHHHHHHHHHHcCCChHHh-HHHHHHHHHHHHHHHHhhhhccCcccCCC--CCC-ceeEeeeccceeEEE
Q psy3652         101 RQIGDALRHKLVPLGQLVSLEMGKILAEG-IGEVQEFIDICDYAVGLSRTYSGSILPSE--RPG-HVLLENWNPLGVVGI  176 (394)
Q Consensus       101 ~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~a~~~~~~~~~~~~~~--~~~-~~~~~~~~P~GVV~~  176 (394)
                      .++++++++|+++|+.+.+.|.|.-...| +..+...++.+||++++.+++.|.++|.+  +|+ ...++.++|+|||++
T Consensus       490 y~la~lme~h~eelat~e~ldagavytlalkthvgmsi~~~ryfagwcdkiqg~tipi~~arpn~nl~lt~~epigv~g~  569 (881)
T KOG2452|consen  490 YRLADLMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGSTIPINQARPNRNLTLTRKEPVGVCGI  569 (881)
T ss_pred             hhccchhhhccchhhhhhhccccceeeeeehhhcCceehHHHHhhhhhhhccCceeccccCCCCCcceeeecCcceeEEE
Confidence            99999999999999999999999888777 46788999999999999999999887754  343 346789999999999


Q ss_pred             EccCCchhHhHHHHHHHHh--------------------------------------------hHHHHHh-----hhhhh
Q psy3652         177 ISAFNFPVAVYGWNAAIAL--------------------------------------------VGVAVQS-----RFGKL  207 (394)
Q Consensus       177 I~p~N~P~~~~~~~~~~aL--------------------------------------------~g~~i~~-----~~~~~  207 (394)
                      |+|||||+.++.|+.+.+|                                            +|+.+++     +.|++
T Consensus       570 i~pwnyplmmlswk~aaclaa~~~k~~e~sgvini~~gsgslvg~rls~hpdvrkigftgsteig~~im~sca~snikkv  649 (881)
T KOG2452|consen  570 IIPWNYPLMMLSWKTAACLAAQVLKFAELTGVVNVLPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCAISNVKKV  649 (881)
T ss_pred             eccCCchHHHHHHHHHHHHHHHHhhhhhhcceEEEecCCcchhccccccCCccceeccccchHHHHHHHHHHhhcchhee
Confidence            9999999999999999998                                            6777775     56799


Q ss_pred             ccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc--------------------------------
Q psy3652         208 LLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK--------------------------------  255 (394)
Q Consensus       208 ~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~--------------------------------  255 (394)
                      .|||||++|+||+.|||+++|++....+.|++-|..|++..|+||.++                                
T Consensus       650 slelgg~sp~iifad~dl~kav~~~~~~vff~kgenciaagr~fi~~sihd~fv~~~vee~~~~~ig~pldr~t~hgpqn  729 (881)
T KOG2452|consen  650 SLELGGESPFIIFADCDLNKAVQMGMSSVFFSKGENCIAAGRLFVEDSIHDEFVRRVVEEVRKMKVGNPLDRDTDHGPQN  729 (881)
T ss_pred             eeeccCCCceEEEecCcHHHHHHhhccceeecCCcchhhhcceeehhhhhHHHHHHHHHHHHhhccCCcccccccCCchh
Confidence            999999999999999999999999999999999999999999999988                                


Q ss_pred             ---------------------------cCCCCCceecCeEEEcCCCCCcccccccccceEEEEeeC--CHHHHHHHHhcC
Q psy3652         256 ---------------------------KIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFD--SLDEAITWNNEV  306 (394)
Q Consensus       256 ---------------------------~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~--~~~eAi~~~n~~  306 (394)
                                                 .++..|+|++|||+.++..+|-+..||.||||+.|.+|+  |+|++++.+|++
T Consensus       730 h~ahl~kl~ey~~~~v~~ga~~~~gg~~~~r~g~~f~pti~s~i~d~~f~a~eesfgpim~is~f~d~d~~~vl~ran~t  809 (881)
T KOG2452|consen  730 HHAHLVKLMEYCQHGVKEGATLVCGGNQVPRPGFFFEPTVFTDVEDHMFIAKEESFGPVMIISRFADGDLDAVLSRANAT  809 (881)
T ss_pred             HHHHHHHHHHHHHHHhccCcEEEECCccCCCCCcccCCeeecccchhhhhhhccccCceEEEEecCCCCHHHHHhhcccc
Confidence                                       345789999999999999999999999999999999998  589999999999


Q ss_pred             CCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEEec
Q psy3652         307 KQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTINH  381 (394)
Q Consensus       307 ~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~~~  381 (394)
                      ++||+++|||+|...+.+++  ..+++|+|++|+.. -.+..+||||+|+||+|+..|.+++.+|.+.|+|++.+
T Consensus       810 efgla~gvftrd~~k~l~v~--~~l~agtvfvnty~-ktdvaapfggfkqsgfgkd~ge~alneyl~~ktit~ey  881 (881)
T KOG2452|consen  810 EFGLASGVFTRDINKALYVS--DKLQAGTVFVNTYN-KTDVAAPFGGFKQSGFGKDLGEAALNEYLRVKTVTFEY  881 (881)
T ss_pred             ccccccceeecccchhhhhh--hhhccceEEEeecc-ccccccCCCCccccccccchhHHHHhhheeeEEEEeeC
Confidence            99999999999999999999  78999999999864 34566899999999999999999999999999998864

>cd07134 ALDH_AlkH-like Pseudomonas putida Aldehyde dehydrogenase AlkH-like

Probab=100.00  E-value=1.9e-62  Score=493.54  Aligned_cols=301  Identities=24%  Similarity=0.344  Sum_probs=270.1

Q ss_pred             HHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCChHHhH-HHHHHHHHHHHHHHHhhhhccCc-
Q psy3652          76 RCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGI-GEVQEFIDICDYAVGLSRTYSGS-  153 (394)
Q Consensus        76 ~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~~~-  153 (394)
                      +++++|++||+.|+.+|..+|.++|++++++|++++++|++++++|+|||+.+++ .|+..+++.+++++.......+. 
T Consensus         2 ~~~~~a~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~~~~   81 (433)
T cd07134           2 RVFAAQQAHALALRASTAAERIAKLKRLKKAILARREEIIAALAADFRKPAAEVDLTEILPVLSEINHAIKHLKKWMKPK   81 (433)
T ss_pred             hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence            5789999999999999999999999999999999999999999999999999996 69999999999998876554322 


Q ss_pred             ccCC--CCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh------------------------------------
Q psy3652         154 ILPS--ERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL------------------------------------  195 (394)
Q Consensus       154 ~~~~--~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL------------------------------------  195 (394)
                      ..+.  ...+...++.++|+|||++|+|||||+.+.++++++||                                    
T Consensus        82 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~~~~~~~a~p~g~v~~  161 (433)
T cd07134          82 RVRTPLLLFGTKSKIRYEPKGVCLIISPWNYPFNLAFGPLVSAIAAGNTAILKPSELTPHTSAVIAKIIREAFDEDEVAV  161 (433)
T ss_pred             ccCCccccCCCceEEEEecCCEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHhCCcCEEEE
Confidence            1111  11234467899999999999999999999999999999                                    


Q ss_pred             --------------------------hHHHHHh----hhhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCccc
Q psy3652         196 --------------------------VGVAVQS----RFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCT  245 (394)
Q Consensus       196 --------------------------~g~~i~~----~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~  245 (394)
                                                +|+.|++    ..+|+++|+|||||+||++|||++.|++.+++++|.++||.|+
T Consensus       162 v~g~~~~~~~l~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~~~iV~~dAD~~~aa~~i~~~~~~~~GQ~C~  241 (433)
T cd07134         162 FEGDAEVAQALLELPFDHIFFTGSPAVGKIVMAAAAKHLASVTLELGGKSPTIVDETADLKKAAKKIAWGKFLNAGQTCI  241 (433)
T ss_pred             EeCChhHHHHHHhCCCCEEEEECChHHHHHHHHHHHhcCCcEEEEccCCCcEEECCCCCHHHHHHHHHHHhhcCcCCccc
Confidence                                      6676654    4568999999999999999999999999999999999999999


Q ss_pred             CCceEEEecc-------------------c----------------------------------------CCCCCceecC
Q psy3652         246 TTRRLFLHKK-------------------K----------------------------------------IDRPGYFVEP  266 (394)
Q Consensus       246 a~~rv~V~~~-------------------~----------------------------------------~~~~g~~~~P  266 (394)
                      ++++||||++                   .                                        .+..|+|++|
T Consensus       242 a~~rv~V~~~v~d~f~~~L~~~~~~~~~~~~~~~~~~~~gpli~~~~~~~i~~~i~~a~~~ga~~~~gg~~~~~g~~~~P  321 (433)
T cd07134         242 APDYVFVHESVKDAFVEHLKAEIEKFYGKDAARKASPDLARIVNDRHFDRLKGLLDDAVAKGAKVEFGGQFDAAQRYIAP  321 (433)
T ss_pred             CCcEEEECHHHHHHHHHHHHHHHHHHcCCCCCcCCCCccCCcCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCCCCCEEee
Confidence            9999999999                   0                                        0113789999


Q ss_pred             eEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCC-CC
Q psy3652         267 TIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTN-GA  345 (394)
Q Consensus       267 tvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~-~~  345 (394)
                      ||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.+++++  .++++|.|+||..+. ..
T Consensus       322 tvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~--~~l~~g~v~iN~~~~~~~  399 (433)
T cd07134         322 TVLTNVTPDMKIMQEEIFGPVLPIITYEDLDEVIEYINAKPKPLALYVFSKDKANVNKVL--ARTSSGGVVVNDVVLHFL  399 (433)
T ss_pred             EEEeCCCCccHHHhccccCceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHH--HhCCcceEEECCcccccC
Confidence            999999999999999999999999999999999999999999999999999999999999  889999999998653 34


Q ss_pred             CCCCCccCCCCCCCCCCchHHHHHhhhheeEEE
Q psy3652         346 EIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVT  378 (394)
Q Consensus       346 ~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~  378 (394)
                      .+.+||||+|.||+|+++|.+++++|++.|++.
T Consensus       400 ~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~i~  432 (433)
T cd07134         400 NPNLPFGGVNNSGIGSYHGVYGFKAFSHERAVL  432 (433)
T ss_pred             CCCCCCCCcCcccCCCcCcHHHHHHhcccceee
Confidence            567899999999999999999999999999874

Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD.

>cd07087 ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins

Probab=100.00  E-value=3.5e-62  Score=491.02  Aligned_cols=301  Identities=23%  Similarity=0.335  Sum_probs=269.4

Q ss_pred             HHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCChHHhH-HHHHHHHHHHHHHHHhhhhccCcc
Q psy3652          76 RCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGI-GEVQEFIDICDYAVGLSRTYSGSI  154 (394)
Q Consensus        76 ~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~~~~  154 (394)
                      +|+++|++||+.|+.+|+.+|.++|++++++|++++++|++++++|+|||..++. .|+..+++.++++++.++.+.+..
T Consensus         2 ~~v~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~~~~~Ev~~~~~~~~~~~~~~~~~~~~~   81 (426)
T cd07087           2 ELVARLRETFLTGKTRSLEWRKAQLKALKRMLTENEEEIAAALYADLGKPPAEAYLTEIAVVLGEIDHALKHLKKWMKPR   81 (426)
T ss_pred             hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence            4899999999999999999999999999999999999999999999999988775 599999999999998876653321


Q ss_pred             -cCC--CCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh------------------------------------
Q psy3652         155 -LPS--ERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL------------------------------------  195 (394)
Q Consensus       155 -~~~--~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL------------------------------------  195 (394)
                       ...  ...+...+..++|+|||++|+|||||+.+.++++++||                                    
T Consensus        82 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlKps~~~p~~~~~l~~~~~~~~P~gv~~v  161 (426)
T cd07087          82 RVSVPLLLQPAKAYVIPEPLGVVLIIGPWNYPLQLALAPLIGAIAAGNTVVLKPSELAPATSALLAKLIPKYFDPEAVAV  161 (426)
T ss_pred             ccCCccccCCCceEEEEecCcEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHhCCCCEEEE
Confidence             111  11233457789999999999999999999999999999                                    


Q ss_pred             --------------------------hHHHHHh----hhhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCccc
Q psy3652         196 --------------------------VGVAVQS----RFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCT  245 (394)
Q Consensus       196 --------------------------~g~~i~~----~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~  245 (394)
                                                +|+.|++    ++||+++|+|||||+||++|||++.|++.+++++|.|+||.|+
T Consensus       162 v~g~~~~~~~l~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~  241 (426)
T cd07087         162 VEGGVEVATALLAEPFDHIFFTGSPAVGKIVMEAAAKHLTPVTLELGGKSPCIVDKDANLEVAARRIAWGKFLNAGQTCI  241 (426)
T ss_pred             EeCCchHHHHHHhCCCCEEEEeCChHHHHHHHHHHHhhCCceEEeccCCCceEecCCCCHHHHHHHHHHHHHhccCCccc
Confidence                                      5666654    4679999999999999999999999999999999999999999


Q ss_pred             CCceEEEecc-------------------c---------------------------------CCCCCceecCeEEEcCC
Q psy3652         246 TTRRLFLHKK-------------------K---------------------------------IDRPGYFVEPTIVTGLP  273 (394)
Q Consensus       246 a~~rv~V~~~-------------------~---------------------------------~~~~g~~~~Ptvl~~v~  273 (394)
                      +++|||||++                   .                                 .+..|+|+.|||+.+++
T Consensus       242 a~~rv~V~~~i~d~f~~~L~~~~~~l~~~~~~~~~~~gpli~~~~~~~~~~~i~~a~v~~gg~~~~~g~~~~Ptvl~~~~  321 (426)
T cd07087         242 APDYVLVHESIKDELIEELKKAIKEFYGEDPKESPDYGRIINERHFDRLASLLDDGKVVIGGQVDKEERYIAPTILDDVS  321 (426)
T ss_pred             cCCEEEEcHHHHHHHHHHHHHHHHHHcCCCCccCCCcCCCCCHHHHHHHHHHHhcceEEeCCccCCCCCEEeeEEEecCC
Confidence            9999999998                   0                                 01137899999999999


Q ss_pred             CCCcccccccccceEEEEeeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCC-CCCCCCCcc
Q psy3652         274 HNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTN-GAEIGGAFG  352 (394)
Q Consensus       274 ~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~-~~~~~~pfG  352 (394)
                      ++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++++++  .++++|+|+||.+.. ...+.+|||
T Consensus       322 ~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~--~~l~~g~v~iN~~~~~~~~~~~PfG  399 (426)
T cd07087         322 PDSPLMQEEIFGPILPILTYDDLDEAIEFINSRPKPLALYLFSEDKAVQERVL--AETSSGGVCVNDVLLHAAIPNLPFG  399 (426)
T ss_pred             CCCHHHhcccccceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHH--hcCCcccEEECCcccccCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999  889999999998643 234678999


Q ss_pred             CCCCCCCCCCchHHHHHhhhheeEEE
Q psy3652         353 GEKYTGGGRESGSDSWKQYCRRSTVT  378 (394)
Q Consensus       353 G~~~SG~G~~~g~~~l~~f~~~k~v~  378 (394)
                      |+|.||+|+++|.+++++|++.|+++
T Consensus       400 G~k~SG~G~~~g~~~l~~~~~~k~~~  425 (426)
T cd07087         400 GVGNSGMGAYHGKAGFDTFSHLKSVL  425 (426)
T ss_pred             CCCcccCCCccCHHHHHHhccceeec
Confidence            99999999999999999999999874

ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate.

>KOG2453|consensus

Probab=100.00  E-value=1.8e-63  Score=456.64  Aligned_cols=375  Identities=69%  Similarity=1.152  Sum_probs=353.1

Q ss_pred             cccCCcchhhhhcCCCCCCCCCceeCCeeccCCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhH
Q psy3652          17 SDSVSKYPFLKELGLSGSVNPGVYDGTSWKANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRR   96 (394)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~~~~~~i~G~~~~~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R   96 (394)
                      ++..+.|.+|++|++. +.....|. |+|..++..+..++|++.++|+.|..++.+|.+.+++.|++|++.|...|...|
T Consensus         2 lin~~~y~flkelglt-e~n~gvy~-gkw~a~g~vv~t~~pann~pia~v~~asv~dye~~~k~a~ea~kiw~~vpapkr   79 (507)
T KOG2453|consen    2 LINDSKYGFLKELGLT-ENNAGVYH-GKWAASGQVVQTFAPANNSPIANVQNASVQDYEIAIKEAKEAYKIWCEVPAPKR   79 (507)
T ss_pred             CcccchhHHHHHhCCc-ccccceee-eeeccCCceeEeecCCCCChhHHHhhccHHHHHHHHHHHHHHHHHHhcCCCCcc
Confidence            3456778999999988 77777665 599999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhCHHHHHHHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEE
Q psy3652          97 GEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGI  176 (394)
Q Consensus        97 ~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~  176 (394)
                      .++.+.+.|.|....+-|-.+++.|+||-..|..+|++..++.++|+.++.+.+.+...|.+++++....+|.|+|+|++
T Consensus        80 geivrqigdalr~klq~lg~lvslemgkilaegvgevqeyvdicdyavglsr~l~g~i~pserpghalleqwnplg~vgv  159 (507)
T KOG2453|consen   80 GEIVRQIGDALRTKLQNLGKLVSLEMGKILAEGVGEVQEYVDICDYAVGLSRSLEGKIFPSERPGHALLEQWNPLGVVGV  159 (507)
T ss_pred             chHHHHHHHHHHHHHHHHhhhhhhhhhhHhhhcchhHHHHHHHHHHhhhhhhhhCCcccCCCCCchhHHHhcCCcceEEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999988889999999999


Q ss_pred             EccCCchhHhHHHHHHHHh-------------------------------------------------------------
Q psy3652         177 ISAFNFPVAVYGWNAAIAL-------------------------------------------------------------  195 (394)
Q Consensus       177 I~p~N~P~~~~~~~~~~aL-------------------------------------------------------------  195 (394)
                      |+.||||....-|+-+.+|                                                             
T Consensus       160 itafnfpcavygwnnaiaMv~gncVvWKpApttpLtTiAvtklIaevL~qnnl~~aicsltcG~aDigrAaakdgRvnlv  239 (507)
T KOG2453|consen  160 ITAFNFPCAVYGWNNAIAMVCGNCVVWKPAPTTPLTTIAVTKLIAEVLEQNNLPGAICSLTCGGADIGRAAAKDGRVNLV  239 (507)
T ss_pred             EEeccCCceeeccCchhhhhhcceeEecCCCCcceeHHHHHHHHHHHHhccCCCcceeeecccchhhhhhccccCceeec
Confidence            9999999998888777776                                                             


Q ss_pred             -----------hHHHHHhhhhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc---------
Q psy3652         196 -----------VGVAVQSRFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK---------  255 (394)
Q Consensus       196 -----------~g~~i~~~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~---------  255 (394)
                                 ++..+..++.+..|||||+|+.||.+|||+..++...++++...+||+|+...|++||++         
T Consensus       240 sftGssQvgKsvgq~vqarfgk~llelggnnaiiv~edadl~lvvps~lfaavgtagqrctt~rrl~~hesvyd~vlerl  319 (507)
T KOG2453|consen  240 SFTGSSQVGKSVGQQVQARFGKLLLELGGNNAIIVNEDADLNLVVPSTLFAAVGTAGQRCTTTRRLIVHESVYDQVLERL  319 (507)
T ss_pred             ccccchhhhhHHHHHHHHHhhhHHHhhcCCceEEEeccccceeeehHHHHHHhcccccchhhhhHHHhhHHHHHHHHHHH
Confidence                       344445577899999999999999999999999999999999999999999999999999         


Q ss_pred             --------------------------------------------------cCCCCCceecCeEEEcCCCCCccccccccc
Q psy3652         256 --------------------------------------------------KIDRPGYFVEPTIVTGLPHNSRVVHRETFA  285 (394)
Q Consensus       256 --------------------------------------------------~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FG  285 (394)
                                                                        .++.+|+|+.|||++ ...|.++..+|.|.
T Consensus       320 kkayaq~~ignpld~ntl~gplht~qav~~f~~~veeak~~ggki~yggkv~er~gnfveptivt-l~hda~vv~~etfa  398 (507)
T KOG2453|consen  320 KKAYAQFEIGNPLDSNTLIGPLHTQQAVGKFKASVEEAKASGGKIEYGGKVLERDGNFVEPTIVT-LKHDAPVVLRETFA  398 (507)
T ss_pred             HHHHHheecCCcCCCCceeccccCHHHHHHHHHHHHHHHhcCCeEEECCEeeccCCCcccceEEE-ecCCcchhhhhhcc
Confidence                                                              345789999999997 89999999999999


Q ss_pred             ceEEEEeeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchH
Q psy3652         286 PIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGS  365 (394)
Q Consensus       286 Pvl~v~~~~~~~eAi~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~  365 (394)
                      |||.|.+|++++||+++-|..+.||+++|||+|..++.+.......++|.|++|.++.+++.+-.|||-|.+|-||+.|.
T Consensus       399 pilyvlkf~~~eea~ainnev~qglsssift~n~~nifrw~gpkgsdcgivnvniptsgaeiggafggek~tgggresgs  478 (507)
T KOG2453|consen  399 PILYVLKFSTLEEAIAINNEVDQGLSSSIFTTNIQNIFRWMGPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGGRESGS  478 (507)
T ss_pred             ceeeEEeccchhhhheeccccccccchhhhhcCHHHHHhhhCCCCCccceEEecCCCCchhhcccccCccccCCCcccCc
Confidence            99999999999999999999999999999999999999998888999999999999988888899999999999999999


Q ss_pred             HHHHhhhheeEEEEecCCcccccccccCC
Q psy3652         366 DSWKQYCRRSTVTINHGKEITLAQGIKFE  394 (394)
Q Consensus       366 ~~l~~f~~~k~v~~~~~~~~~~~~~~~~~  394 (394)
                      +++++|+++.++++++.+++|+||||+|+
T Consensus       479 dswkqymrrstctinyskelplaqgikf~  507 (507)
T KOG2453|consen  479 DSWKQYMRRSTCTINYSKELPLAQGIKFE  507 (507)
T ss_pred             hHHHHHHhhceeeeeccccCchhhccCCC
Confidence            99999999999999999999999999996

>PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

Probab=100.00  E-value=2.1e-61  Score=528.24  Aligned_cols=325  Identities=29%  Similarity=0.440  Sum_probs=293.2

Q ss_pred             eeCCeeccCCCeeeeecCCC-CCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHH
Q psy3652          40 YDGTSWKANGEIIPSINPST-GETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLV  118 (394)
Q Consensus        40 ~i~G~~~~~~~~~~v~nP~t-g~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~  118 (394)
                      .|+|+.. .+..++++||+| ++++++++.++++++++||++|++||+.|+.+|.++|+++|++++++|++++++|++++
T Consensus       558 ~i~g~~~-~~~~~~v~nP~~~~~~vg~v~~a~~~~v~~Av~aA~~A~~~W~~~~~~~Ra~iL~raAdll~~~~~eL~~l~  636 (1208)
T PRK11905        558 LLAGGDV-DGGTRPVLNPADHDDVVGTVTEASAEDVERALAAAQAAFPEWSATPAAERAAILERAADLMEAHMPELFALA  636 (1208)
T ss_pred             eeccccc-cCCeeeEECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence            4555433 366789999999 99999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh---
Q psy3652         119 SLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL---  195 (394)
Q Consensus       119 ~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL---  195 (394)
                      ++|+||++.++..|+..++++++||+..++...+            ...++|+|||++|+|||||+.+.++++++||   
T Consensus       637 ~~E~GKt~~ea~~Ev~eaid~lr~ya~~a~~~~~------------~~~~~P~GVv~~IsPwNfPlai~~g~i~aALaaG  704 (1208)
T PRK11905        637 VREAGKTLANAIAEVREAVDFLRYYAAQARRLLN------------GPGHKPLGPVVCISPWNFPLAIFTGQIAAALVAG  704 (1208)
T ss_pred             HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcC------------CceecCccEEEEEcCCcCHHHHHHHHHHHHHHcC
Confidence            9999999999999999999999999988765421            1357899999999999999999999999998   


Q ss_pred             --------------------------------------------------------------hHHHHHhh-------hhh
Q psy3652         196 --------------------------------------------------------------VGVAVQSR-------FGK  206 (394)
Q Consensus       196 --------------------------------------------------------------~g~~i~~~-------~~~  206 (394)
                                                                                    +|+.|.+.       .+|
T Consensus       705 N~VV~KPse~tpl~a~~l~~ll~eAGlP~gvl~lV~G~g~~vg~~Lv~~p~v~~V~FTGSt~vg~~I~~~~A~~~~~~~p  784 (1208)
T PRK11905        705 NTVLAKPAEQTPLIAARAVRLLHEAGVPKDALQLLPGDGRTVGAALVADPRIAGVMFTGSTEVARLIQRTLAKRSGPPVP  784 (1208)
T ss_pred             CEEEEeCCcccHHHHHHHHHHHHHcCCCcccEEEeeCCchHHHHHHHcCCCcCEEEEeCCHHHHHHHHHHHHhhcCCCCe
Confidence                                                                          66666542       368


Q ss_pred             hccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc-------------------------------
Q psy3652         207 LLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK-------------------------------  255 (394)
Q Consensus       207 ~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~-------------------------------  255 (394)
                      +++|+|||||+||++|||+|.|++.+++++|.++||.|++.++||||++                               
T Consensus       785 li~ElGGkN~~IV~~dAdle~Av~~iv~saF~~aGQ~CsA~~rl~V~~si~d~f~e~L~~~~~~l~vGdP~d~~t~~GPv  864 (1208)
T PRK11905        785 LIAETGGQNAMIVDSSALPEQVVADVIASAFDSAGQRCSALRVLCLQEDVADRVLTMLKGAMDELRIGDPWRLSTDVGPV  864 (1208)
T ss_pred             EEEecCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEehhHHHHHHHHHHHHHHHhcCCCchhccCCccCc
Confidence            9999999999999999999999999999999999999999999999999                               


Q ss_pred             --------------------------cCC---CCCceecCeEEEcCCCCCcccccccccceEEEEeeC--CHHHHHHHHh
Q psy3652         256 --------------------------KID---RPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFD--SLDEAITWNN  304 (394)
Q Consensus       256 --------------------------~~~---~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~--~~~eAi~~~n  304 (394)
                                                ..+   ..|+|+.|||+. + +++.++++|+||||++|++|+  |+||+|+++|
T Consensus       865 Id~~a~~~i~~~I~~a~~~G~~l~~g~~~~~~~~G~fv~PTVl~-~-~~~~~~~eEiFGPVL~V~~y~~~dldeaI~~iN  942 (1208)
T PRK11905        865 IDAEAQANIEAHIEAMRAAGRLVHQLPLPAETEKGTFVAPTLIE-I-DSISDLEREVFGPVLHVVRFKADELDRVIDDIN  942 (1208)
T ss_pred             cCHHHHHHHHHHHHHHHHCCCEEEEccCCCCCCCCeEEeeEEEe-c-CChHHhcCCccCceEEEEEeCCCCHHHHHHHHh
Confidence                                      001   348999999996 3 578899999999999999997  6999999999


Q ss_pred             cCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCC-CCCccCCCCCCCC-CCchHHHHHhhhheeEEEEec
Q psy3652         305 EVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEI-GGAFGGEKYTGGG-RESGSDSWKQYCRRSTVTINH  381 (394)
Q Consensus       305 ~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~-~~pfGG~~~SG~G-~~~g~~~l~~f~~~k~v~~~~  381 (394)
                      +++|||+++|||+|.+.+.++.  .++++|+|+||....+... ..||||+|.||+| +.+|++++..|++.|+++++.
T Consensus       943 ~t~yGLt~~I~S~d~~~~~~~~--~~l~aGnvyIN~~~~ga~vg~qPFGG~~~SG~G~kaGGp~~L~~f~~~k~v~~~~ 1019 (1208)
T PRK11905        943 ATGYGLTFGLHSRIDETIAHVT--SRIRAGNIYVNRNIIGAVVGVQPFGGEGLSGTGPKAGGPLYLGRLVREAPTPIPP 1019 (1208)
T ss_pred             cCCCCceEEEEcCCHHHHHHHH--HhCCEeEEEECCCCCCCccCCCCCCCCCCCCCCCcCCCHHHHHHHhhcceeeccc
Confidence            9999999999999999999999  8899999999987655443 4699999999999 588999999999999998763

>PRK10090 aldehyde dehydrogenase A; Provisional

Probab=100.00  E-value=1e-61  Score=483.68  Aligned_cols=279  Identities=32%  Similarity=0.503  Sum_probs=253.1

Q ss_pred             HHHHHHHHhhCHHHHHHHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEcc
Q psy3652         100 VRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISA  179 (394)
Q Consensus       100 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p  179 (394)
                      |++++++|++++++|++++++|+|||+.+++.|+..+++.++|++++++...+...+...++...++.++|+|||++|+|
T Consensus         1 L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p   80 (409)
T PRK10090          1 LRKIAAGIRERASEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILP   80 (409)
T ss_pred             CHHHHHHHHHCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCCCceeEEEEecccEEEEECC
Confidence            57999999999999999999999999999999999999999999999887765543332234456788999999999999


Q ss_pred             CCchhHhHHHHHHHHh----------------------------------------------------------------
Q psy3652         180 FNFPVAVYGWNAAIAL----------------------------------------------------------------  195 (394)
Q Consensus       180 ~N~P~~~~~~~~~~aL----------------------------------------------------------------  195 (394)
                      ||||+.+.++++++||                                                                
T Consensus        81 ~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~  160 (409)
T PRK10090         81 WNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPKGVFNLVLGRGETVGQELAGNPKVAMVSMTGSV  160 (409)
T ss_pred             CchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHcCCCcccEEEEeCCChhHHHHHhcCCCcCEEEEECCH
Confidence            9999999999999999                                                                


Q ss_pred             -hHHHHHh----hhhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc---------------
Q psy3652         196 -VGVAVQS----RFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK---------------  255 (394)
Q Consensus       196 -~g~~i~~----~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~---------------  255 (394)
                       +|+.|++    ++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++               
T Consensus       161 ~~g~~v~~~aa~~~~~~~lElgGk~p~iV~~dADld~aa~~iv~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~  240 (409)
T PRK10090        161 SAGEKIMAAAAKNITKVCLELGGKAPAIVMDDADLDLAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQA  240 (409)
T ss_pred             HHHHHHHHHHHhcCCeEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHh
Confidence             6777764    56799999999999999999999999999999999999999999999999999               


Q ss_pred             -----cC----------------------------------------CCCCceecCeEEEcCCCCCcccccccccceEEE
Q psy3652         256 -----KI----------------------------------------DRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYV  290 (394)
Q Consensus       256 -----~~----------------------------------------~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v  290 (394)
                           ..                                        +..|+|++|||+.+++++|++++||+||||++|
T Consensus       241 ~~~G~p~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v  320 (409)
T PRK10090        241 VQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPV  320 (409)
T ss_pred             cCCCCCCCcccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEecEEEeCCCCCCHHHhCCCCCceEEE
Confidence                 00                                        013689999999999999999999999999999


Q ss_pred             EeeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHh
Q psy3652         291 FPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQ  370 (394)
Q Consensus       291 ~~~~~~~eAi~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~  370 (394)
                      ++|+|+||||+++|+++|||+++|||+|...+.+++  .++++|.|+||+..... +..||||+|.||+|+++|.+++++
T Consensus       321 ~~~~~~~eai~~~n~~~~gL~~~vft~d~~~~~~~~--~~l~~G~v~iN~~~~~~-~~~pfGG~k~SG~G~~~g~~gl~~  397 (409)
T PRK10090        321 VAFDTLEEAIAMANDSDYGLTSSIYTQNLNVAMKAI--KGLKFGETYINRENFEA-MQGFHAGWRKSGIGGADGKHGLHE  397 (409)
T ss_pred             EEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHH--HhCCcceEEECCCCCCC-CCCCcCCcccccCCccchHHHHHH
Confidence            999999999999999999999999999999999999  88999999999865433 457999999999999999999999


Q ss_pred             hhheeEEEEec
Q psy3652         371 YCRRSTVTINH  381 (394)
Q Consensus       371 f~~~k~v~~~~  381 (394)
                      |++.|++++++
T Consensus       398 f~~~k~v~~~~  408 (409)
T PRK10090        398 YLQTQVVYLQS  408 (409)
T ss_pred             hcceEEEEEec
Confidence            99999998764

>PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

Probab=100.00  E-value=2.6e-61  Score=526.58  Aligned_cols=320  Identities=29%  Similarity=0.423  Sum_probs=287.7

Q ss_pred             eeCCeeccCCCeeeeecCCC-CCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHH
Q psy3652          40 YDGTSWKANGEIIPSINPST-GETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLV  118 (394)
Q Consensus        40 ~i~G~~~~~~~~~~v~nP~t-g~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~  118 (394)
                      .|+|+ ..++..++++||+| ++++++++.++.+||++|+++|++||+.|+.+|..+|+++|++++++|++++++|+.++
T Consensus       650 ~~~~~-~~~~~~~~v~nPa~~~~~vg~v~~a~~~dv~~Av~aA~~A~~~W~~~p~~eRa~iL~r~Adlle~~~~eL~~l~  728 (1318)
T PRK11809        650 MLEDP-VAAGEMSPVINPADPRDIVGYVREATPAEVEQALESAVNAAPIWFATPPAERAAILERAADLMEAQMQTLMGLL  728 (1318)
T ss_pred             cccCc-CCCCCEEEeECCCCCCeeEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHH
Confidence            45663 34567899999998 78999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh---
Q psy3652         119 SLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL---  195 (394)
Q Consensus       119 ~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL---  195 (394)
                      ++|+|||+.++..|+..++++++||+..++....            ...++|+|||++|+|||||++++++++++||   
T Consensus       729 ~~EaGKt~~~A~~EV~eaidflryyA~~a~~~~~------------~~~~~PlGVV~~IsPWNFPlai~~g~iaaALaAG  796 (1318)
T PRK11809        729 VREAGKTFSNAIAEVREAVDFLRYYAGQVRDDFD------------NDTHRPLGPVVCISPWNFPLAIFTGQVAAALAAG  796 (1318)
T ss_pred             HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcC------------CceeecccEEEEECCCccHHHHHHHHHHHHHHcC
Confidence            9999999999999999999999999988754210            1358999999999999999999999999999   


Q ss_pred             --------------------------------------------------------------hHHHHHhh----h-----
Q psy3652         196 --------------------------------------------------------------VGVAVQSR----F-----  204 (394)
Q Consensus       196 --------------------------------------------------------------~g~~i~~~----~-----  204 (394)
                                                                                    +|+.|.+.    +     
T Consensus       797 N~VV~KPseqTpl~a~~lv~ll~eAGlP~gvlqlv~G~g~~vg~~Lv~~p~V~~V~FTGSt~tg~~I~~~aA~~l~~~g~  876 (1318)
T PRK11809        797 NSVLAKPAEQTPLIAAQAVRILLEAGVPAGVVQLLPGRGETVGAALVADARVRGVMFTGSTEVARLLQRNLAGRLDPQGR  876 (1318)
T ss_pred             CeEEEeCCCCcHHHHHHHHHHHHHhCcCcCeEEEeeCCcHHHHHHHhcCCCcCEEEEeCCHHHHHHHHHHHhhhcccccC
Confidence                                                                          66777652    2     


Q ss_pred             -hhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc----------------------------
Q psy3652         205 -GKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK----------------------------  255 (394)
Q Consensus       205 -~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~----------------------------  255 (394)
                       +|+++|+|||||+||++|||+|.|++.+++++|.++||.|++.+++|||++                            
T Consensus       877 ~~pliaElGGkNa~IVdsdAdle~Av~~iv~sAF~~aGQrCsA~~rl~V~e~Iad~fl~~L~~a~~~l~vGdP~~~~tdv  956 (1318)
T PRK11809        877 PIPLIAETGGQNAMIVDSSALTEQVVADVLASAFDSAGQRCSALRVLCLQDDVADRTLKMLRGAMAECRMGNPDRLSTDI  956 (1318)
T ss_pred             ceeEEEecCCccceEECCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEcHHHHHHHHHHHHHHHHhcCCCCcccccCCc
Confidence             589999999999999999999999999999999999999999999999999                            


Q ss_pred             -----------------------------cCC-----CCCceecCeEEEcCCCCCcccccccccceEEEEeeC--CHHHH
Q psy3652         256 -----------------------------KID-----RPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFD--SLDEA  299 (394)
Q Consensus       256 -----------------------------~~~-----~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~--~~~eA  299 (394)
                                                   ...     ..|+|++|||+..  +++.++++|+||||++|++|+  |+||+
T Consensus       957 GPvId~~a~~~i~~~I~~a~~~G~~v~~g~~~~~~~~~~G~fv~PTIi~~--~~~~~l~eEiFGPVL~V~~~~~~~ldea 1034 (1318)
T PRK11809        957 GPVIDAEAKANIERHIQAMRAKGRPVFQAARENSEDWQSGTFVPPTLIEL--DSFDELKREVFGPVLHVVRYNRNQLDEL 1034 (1318)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHcCCEEEecCCCCCCCCCCCeEEeeEEEec--cchhhhcCcccCceEEEEEeCCCCHHHH
Confidence                                         001     2489999999963  568889999999999999997  79999


Q ss_pred             HHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCC-CCCCccCCCCCCCC-CCchHHHHHhhhheeE
Q psy3652         300 ITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAE-IGGAFGGEKYTGGG-RESGSDSWKQYCRRST  376 (394)
Q Consensus       300 i~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~-~~~pfGG~~~SG~G-~~~g~~~l~~f~~~k~  376 (394)
                      |+++|+++|||+++|||+|.+.+.+++  .++++|+|+||....+.. ...||||+|.||+| +.+|++++..|++.+.
T Consensus      1035 I~~iN~t~yGLt~gV~Srd~~~~~~v~--~~l~aGnvyINr~~~gavvg~qPFGG~g~SG~G~kaGGp~yL~~f~~~~~ 1111 (1318)
T PRK11809       1035 IEQINASGYGLTLGVHTRIDETIAQVT--GSAHVGNLYVNRNMVGAVVGVQPFGGEGLSGTGPKAGGPLYLYRLLATRP 1111 (1318)
T ss_pred             HHHHhcCCCCceEEEEeCCHHHHHHHH--HhCCEeEEEECCCCcCCCcCCCCCCCcCcCCCCCCCCCHHHHHHHhccCC
Confidence            999999999999999999999999999  889999999998654443 33699999999999 5799999999998763

>KOG2454|consensus

Probab=100.00  E-value=1.5e-61  Score=451.23  Aligned_cols=331  Identities=21%  Similarity=0.347  Sum_probs=300.0

Q ss_pred             CCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCChH
Q psy3652          48 NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILA  127 (394)
Q Consensus        48 ~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~  127 (394)
                      +.+.++.+-|+||+.+++++.-++.|||+-|..|++|+++|+..+..+|.+.|+.+.+.+-+++|.+++..++|+||+..
T Consensus        62 ~~~~vqCycPatg~yLG~fp~~~~tdide~v~la~kAQktW~~ssF~~Rr~fL~~L~~yIi~nQdliaevacrDtGKTmv  141 (583)
T KOG2454|consen   62 SDKKVQCYCPATGKYLGYFPALSPTDIDERVTLARKAQKTWAQSSFKLRRQFLRILLKYIIENQDLIAEVACRDTGKTMV  141 (583)
T ss_pred             CCCceEEecCCCcceeeecccCChhhHHHHHHHHHHHHhhhhhccHHHHHHHHHHHHHHHhhchhheeeeeecccCchhh
Confidence            45679999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             Hh-HHHHHHHHHHHHHHHHhhhhcc-CcccCCCC--CCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh--------
Q psy3652         128 EG-IGEVQEFIDICDYAVGLSRTYS-GSILPSER--PGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL--------  195 (394)
Q Consensus       128 ~a-~~ev~~~~~~l~~~a~~~~~~~-~~~~~~~~--~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL--------  195 (394)
                      +| .+|+.-+++.+.|......++. .+..|+..  .-...+++++|+||+++|.|||||+..+++.+..||        
T Consensus       142 DAs~GEIlvTlEKI~Wtl~~Ger~L~P~~Rpn~~~~~yKg~~v~yePLGVI~aiVsWNYPfHN~lgPiiaAlFsGNaIVv  221 (583)
T KOG2454|consen  142 DASLGEILVTLEKITWTLSEGERWLKPESRPNGRAMLYKGSRVEYEPLGVIGAIVSWNYPFHNILGPIIAALFSGNAIVV  221 (583)
T ss_pred             hhhHhHHHHHHHHhhhhhhcchhhcCCcCCCchhheeeccceEEEeecceEEEeeecCCchhhhhhHHHHHHhcCCeEEE
Confidence            88 6899999999999887765543 22233211  113356789999999999999999999999999998        


Q ss_pred             ------------------------------------------------------------hHHHHHh----hhhhhcccc
Q psy3652         196 ------------------------------------------------------------VGVAVQS----RFGKLLLEL  211 (394)
Q Consensus       196 ------------------------------------------------------------~g~~i~~----~~~~~~lEl  211 (394)
                                                                                  +++.|++    .++|+++||
T Consensus       222 K~SE~~~WS~~fy~e~ir~~L~a~g~~p~LVq~itclpd~a~~ltSh~g~khitFiGSqpvak~i~~~AAk~LTPv~lEL  301 (583)
T KOG2454|consen  222 KVSEHASWSGCFYFEIIRAALAAVGAPPNLVQVITCLPDTAEALTSHSGVKHITFIGSQPVAKMIMRNAAKTLTPVTLEL  301 (583)
T ss_pred             EeecceeeehhhHHHHHHHHHHHcCCCcchhheeecCcchHhHhhcCCCcceEEEecCcHHHHHHHHhhhhhcCcEEEee
Confidence                                                                        6777765    567999999


Q ss_pred             CCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc------------------------------------
Q psy3652         212 GGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK------------------------------------  255 (394)
Q Consensus       212 gGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~------------------------------------  255 (394)
                      |||++.||++|+|++..+..++++.|..+||.|...+|++||++                                    
T Consensus       302 GGKDafIi~dda~l~~v~si~mRGtfQSsGQNCiGiER~iv~k~~Yd~~i~~l~~rv~s~r~G~~~~~~vDMGAm~s~nr  381 (583)
T KOG2454|consen  302 GGKDAFIICDDADLSHVASIAMRGTFQSSGQNCIGIERFIVHKDIYDAFIGQLTKRVKSVRAGPPLTGRVDMGAMCSQNR  381 (583)
T ss_pred             cCcccEEEeccccHHHHHHHHHhhhhhhcCCcccceeEEEEecchHHHHHHHHHHHHHHHHcCCCccCccchhhhhhccc
Confidence            99999999999999999999999999999999999999999999                                    


Q ss_pred             ---------------------------cCCCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcCCC
Q psy3652         256 ---------------------------KIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQ  308 (394)
Q Consensus       256 ---------------------------~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~~  308 (394)
                                                 .-.+.|.|++||++.|++++|.|++||.|||+++++++++.|++|+++|+++|
T Consensus       382 fdhLesLv~DAv~KGArl~~gGsrF~Hpkyp~g~YF~PTlLvdvt~eMKIaqeE~FgPI~~im~ak~~eh~i~lAN~s~f  461 (583)
T KOG2454|consen  382 FDHLESLVNDAVDKGARLAVGGSRFGHPKYPVGQYFPPTLLVDVTHEMKIAQEEAFGPIMPIMQAKTDEHVIKLANDSRF  461 (583)
T ss_pred             hHHHHHHHHHHHhhcchhhhcccccCCCCCCcccccCCeEEEecCchhhhHhhhccccchhhhhcCChHHHHhhccCCcc
Confidence                                       11246889999999999999999999999999999999999999999999999


Q ss_pred             CcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEEe
Q psy3652         309 GLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTIN  380 (394)
Q Consensus       309 gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~~  380 (394)
                      ||.++||+.|..++++++  .++++|+|.||+-...-.-.+||||+|.||+||+.|.+||+...+.|.|..+
T Consensus       462 gLG~sVFg~dk~~c~y~a--~~lqtG~vAiNDFasfY~cQlPFGG~k~SGyGrFaG~EGLrg~Cn~Ksv~yd  531 (583)
T KOG2454|consen  462 GLGCSVFGGDKHRCKYIA--SQLQTGVVAINDFASFYMCQLPFGGVKDSGYGRFAGIEGLRGCCNVKSVAYD  531 (583)
T ss_pred             cccceeccccHHHHHHHH--hhhhccceeehhhhhhheeccccCCccCCCccccccHHHHHHHhcccceecc
Confidence            999999999999999999  8999999999986544445699999999999999999999999999999665

>cd07121 ALDH_EutE Ethanolamine utilization protein EutE-like

Probab=100.00  E-value=4.9e-60  Score=473.98  Aligned_cols=296  Identities=23%  Similarity=0.273  Sum_probs=253.1

Q ss_pred             HHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhc
Q psy3652          71 VQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTY  150 (394)
Q Consensus        71 ~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~  150 (394)
                      -+|+++|+++|++||+.|+.+|.++|.++|++++++|+++.++|++++++|+|||..++.      ++.++++++.....
T Consensus         3 ~~~v~~av~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~------~~~~~~~~~~~~~~   76 (429)
T cd07121           3 FATVDDAVAAAKAAQKQYRKCTLADREKIIEAIREALLSNAEELAEMAVEETGMGRVEDK------IAKNHLAAEKTPGT   76 (429)
T ss_pred             hhhHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH------HHHHHHHHHhcCcc
Confidence            478999999999999999999999999999999999999999999999999999987764      34456665432111


Q ss_pred             cCcccCC--CCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh---------------------------------
Q psy3652         151 SGSILPS--ERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL---------------------------------  195 (394)
Q Consensus       151 ~~~~~~~--~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL---------------------------------  195 (394)
                      . ...+.  ..++...+++++|+|||++|+|||||+.+.++++++||                                 
T Consensus        77 ~-~~~~~~~~~~~~~~~~~~~PlGVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKpse~tp~t~~~l~~l~~~~~~~aG  155 (429)
T cd07121          77 E-DLTTTAWSGDNGLTLVEYAPFGVIGAITPSTNPTETIINNSISMLAAGNAVVFNPHPGAKKVSAYAVELINKAIAEAG  155 (429)
T ss_pred             c-ccccccccCCCcceEEEEcccceEEEEccCCCchhHHHHHHHHHHHcCCCEEEECCccchhHHHHHHHHHHHHHHHcC
Confidence            0 01010  11223457788999999999999999999999999998                                 


Q ss_pred             ------------------------------------hHHHHHhhhhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCc
Q psy3652         196 ------------------------------------VGVAVQSRFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGT  239 (394)
Q Consensus       196 ------------------------------------~g~~i~~~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~  239 (394)
                                                          +|+.+++.+||+++|+|||||+||++|||++.|++.+++++|.|
T Consensus       156 lP~gvv~~v~g~~~~~~~~L~~~~~v~~I~fTGs~~~g~~v~~~~k~~~lelGGk~p~iV~~dADld~Aa~~i~~~~~~n  235 (429)
T cd07121         156 GPDNLVVTVEEPTIETTNELMAHPDINLLVVTGGPAVVKAALSSGKKAIGAGAGNPPVVVDETADIEKAARDIVQGASFD  235 (429)
T ss_pred             CCcceEEEecCCChHHHHHHHcCCCccEEEeeCCHHHHHHHHhCCCceEeecCCCceEEEecCCCHHHHHHHHHhccccc
Confidence                                                78888888899999999999999999999999999999999999


Q ss_pred             CCCcccCCceEEEecc---------------------------cC----CC------------------CCceec---Ce
Q psy3652         240 AGQRCTTTRRLFLHKK---------------------------KI----DR------------------PGYFVE---PT  267 (394)
Q Consensus       240 ~GQ~C~a~~rv~V~~~---------------------------~~----~~------------------~g~~~~---Pt  267 (394)
                      +||.|++++|||||++                           .+    ..                  .|+|+.   ||
T Consensus       236 ~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~i~~~~~~~v~~~i~~a~~~~~ga~~~~gg~~~~~~~~~G~~~~~~~pt  315 (429)
T cd07121         236 NNLPCIAEKEVIAVDSVADYLIAAMQRNGAYVLNDEQAEQLLEVVLLTNKGATPNKKWVGKDASKILKAAGIEVPADIRL  315 (429)
T ss_pred             CCCCCCccceEEEeHHHHHHHHHHHHHCCCEEcCHHHHHHHHHhhcccCCCccccccccCcCHHHHHHHcCCCCCCCCeE
Confidence            9999999999999999                           00    10                  267777   49


Q ss_pred             EEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcCCCCc--EEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCC
Q psy3652         268 IVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGL--SSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGA  345 (394)
Q Consensus       268 vl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~~gL--sa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~  345 (394)
                      |+.+++++|++++||+||||++|++|+|+||||+++|+++|||  +++|||+|.+++++++  .++++|.||||.++.  
T Consensus       316 il~~v~~~~~i~~eE~FgPVl~v~~~~~~~eAi~~an~~~~GLghsa~I~t~d~~~a~~~a--~~l~aG~v~iN~~~~--  391 (429)
T cd07121         316 IIVETDKDHPFVVEEQMMPILPVVRVKNFDEAIELAVELEHGNRHTAIIHSKNVENLTKMA--RAMQTTIFVKNGPSY--  391 (429)
T ss_pred             EEEecCCCCCccccccccceEEEEEeCCHHHHHHHHHhhccCCCceEEEecCCHHHHHHHH--hhCCceEEEEcCCCc--
Confidence            9999999999999999999999999999999999999999999  9999999999999999  889999999998643  


Q ss_pred             CCCCCccCCCCCCC--CCCc--hHHHHHhhhheeEEE
Q psy3652         346 EIGGAFGGEKYTGG--GRES--GSDSWKQYCRRSTVT  378 (394)
Q Consensus       346 ~~~~pfGG~~~SG~--G~~~--g~~~l~~f~~~k~v~  378 (394)
                       ..+||||+|.|++  |..-  |.-+-+.|++.+.++
T Consensus       392 -~~~p~gG~k~s~~~~~~~~~~~~~~~~~~~~~~~~~  427 (429)
T cd07121         392 -AGLGVGGEGYTTFTIAGPTGEGLTSARTFTRRRRCV  427 (429)
T ss_pred             -CccccCCCccceEEecCCcCcCccChhhhheeeeec
Confidence             5689999999999  5443  334556777666554

Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source.

>KOG2456|consensus

Probab=100.00  E-value=2.6e-60  Score=446.85  Aligned_cols=306  Identities=23%  Similarity=0.335  Sum_probs=273.9

Q ss_pred             HHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCChHHh-HHHHHHHHHHHHHHHHhhhhccC
Q psy3652          74 YHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEG-IGEVQEFIDICDYAVGLSRTYSG  152 (394)
Q Consensus        74 v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~a~~~~~~~~  152 (394)
                      ++..++.+|.+|.+-++.|.+.|.++|+++.+.+++|.++|.+++..|.+|+..++ ..|+...++.++++...++.+..
T Consensus         4 ~~~~v~~~R~~F~sGrtr~~efR~~QL~~L~r~i~e~e~~i~~Al~~DL~k~~~es~~~Ev~~~~~~i~~~l~~L~~wv~   83 (477)
T KOG2456|consen    4 ISETVRRLRLAFSSGRTRPLEFRKQQLEALYRMIQENEKEIIEALAADLHKPELESYLNEVGYVLNEIRYALENLPEWVK   83 (477)
T ss_pred             HHHHHHHHHHHHhcCCcCChHHHHHHHHHHHHHHHhhHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhHHhcc
Confidence            45668999999999999999999999999999999999999999999999999999 47999999999999988777644


Q ss_pred             cc-cCCCC--CCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh----------------------------------
Q psy3652         153 SI-LPSER--PGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL----------------------------------  195 (394)
Q Consensus       153 ~~-~~~~~--~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL----------------------------------  195 (394)
                      .. .....  --...+...+|+|||++|+|||||+.+.+..+++|+                                  
T Consensus        84 ~~~v~~~~~t~~dk~~I~~~p~GvVLiI~~wNyP~~L~l~PligAiAAGN~VVlKPSEls~n~a~~lakllp~Yld~~~~  163 (477)
T KOG2456|consen   84 PEPVKKSFLTFLDKAYIEKEPLGVVLIIGPWNYPLNLTLVPLIGAIAAGNAVVLKPSELSPNTAKLLAKLLPQYLDQDLI  163 (477)
T ss_pred             ccccCcccccccCceeEEecCCceEEEEccCCCcceeehhhhhhhhhcCCEEEechhhcChhHHHHHHHHHHHhcCcceE
Confidence            32 22111  123457789999999999999999999988888887                                  


Q ss_pred             ----------------------------hHHHHHh----hhhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCc
Q psy3652         196 ----------------------------VGVAVQS----RFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQR  243 (394)
Q Consensus       196 ----------------------------~g~~i~~----~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~  243 (394)
                                                  +|+.++.    +++||+||||||||.+|++|+|++-+++.|+|+++.|+||+
T Consensus       164 ~VV~Ggv~ETt~LL~~rfD~IfyTGsp~VgkIim~aAaKhLTPvtLELGGKsP~~vd~~~d~~ia~~RI~~gk~~N~GQt  243 (477)
T KOG2456|consen  164 RVVNGGVPETTELLKQRFDHIFYTGSPRVGKIIMAAAAKHLTPVTLELGGKSPCYVDKNCDLKIAARRIAWGKWMNSGQT  243 (477)
T ss_pred             EEecCCCchHHHHHHhhccEEEecCCchHHHHHHHHHHhcCCcEEEEcCCCCCeeecCCcCHHHHHHHHHHHhhccCCCe
Confidence                                        7887764    67899999999999999999999999999999999999999


Q ss_pred             ccCCceEEEecc-----------------------------------------------------cCCCCCceecCeEEE
Q psy3652         244 CTTTRRLFLHKK-----------------------------------------------------KIDRPGYFVEPTIVT  270 (394)
Q Consensus       244 C~a~~rv~V~~~-----------------------------------------------------~~~~~g~~~~Ptvl~  270 (394)
                      |.++++|+++.+                                                     ..++...|++|||+.
T Consensus       244 CvapDYiL~~k~~~~kli~alk~~l~eFYG~n~~eS~d~sRiIn~~hf~Rl~~ll~~~~kv~~Gg~~d~~d~~I~PTIL~  323 (477)
T KOG2456|consen  244 CVAPDYILCSKSIQPKLIDALKSTLKEFYGENPKESKDLSRIINQRHFQRLSALLDETGKVAIGGESDESDRYIAPTILL  323 (477)
T ss_pred             eccCCeEEecHhhhHHHHHHHHHHHHHHhCCCccccccHHHHhhHHHHHHHHHHhcCCCceecCCccchhhcccCCeEEe
Confidence            999999999999                                                     112345799999999


Q ss_pred             cCCCCCcccccccccceEEEEeeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCC-CCCCCCC
Q psy3652         271 GLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPT-NGAEIGG  349 (394)
Q Consensus       271 ~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~-~~~~~~~  349 (394)
                      ||+.++++|+||+|||||||+.|.|++|+|+.+|+.+-.|++|+||+|.....|+.  .+..+|.|.+|+.. +..-..+
T Consensus       324 DV~~~~p~M~eEIFGPiLPIi~v~~l~Eai~~In~~eKPLa~Y~Fs~n~~~vkr~l--~~tsSGgvt~ND~i~H~~~~~l  401 (477)
T KOG2456|consen  324 DVPEDSPVMQEEIFGPILPIITVQSLDEAINFINEREKPLALYIFSNNEKLVKRFL--TETSSGGVTVNDVIMHVTLDSL  401 (477)
T ss_pred             cCCCCChhhhhhhccCccceeEhhhHHHHHHHHhcCCCceEEEEecCCHHHHHHHH--HhccCCCeeecceEEEEEeecc
Confidence            99999999999999999999999999999999999999999999999999999999  88999999999843 2334568


Q ss_pred             CccCCCCCCCCCCchHHHHHhhhheeEEEEec
Q psy3652         350 AFGGEKYTGGGRESGSDSWKQYCRRSTVTINH  381 (394)
Q Consensus       350 pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~~~  381 (394)
                      ||||++.||+|++||+++++.|++.|++..+.
T Consensus       402 PFGGVG~SGmG~YhGK~sFdTFSH~k~~l~rs  433 (477)
T KOG2456|consen  402 PFGGVGESGMGRYHGKFSFDTFSHEKSCLLRS  433 (477)
T ss_pred             CcCCcCccccccccccccccccccchhhhhcc
Confidence            99999999999999999999999999987653

>cd07129 ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydrogenase

Probab=100.00  E-value=4.4e-59  Score=471.69  Aligned_cols=300  Identities=23%  Similarity=0.228  Sum_probs=262.5

Q ss_pred             HHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhcc--
Q psy3652          74 YHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYS--  151 (394)
Q Consensus        74 v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~--  151 (394)
                      +++|+++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..++..|+..+++.+++++..++...  
T Consensus         1 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gkp~~~~~~ev~~~~~~l~~~a~~~~~~~~~   80 (454)
T cd07129           1 VDAAAAAAAAAFESYRALSPARRAAFLEAIADEIEALGDELVARAHAETGLPEARLQGELGRTTGQLRLFADLVREGSWL   80 (454)
T ss_pred             ChHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence            478999999999999999999999999999999999999999999999999999999999999999999998776421  


Q ss_pred             CcccCCC------CCCceeEeeeccceeEEEEccCCchhHh--HHHHHHHHh----------------------------
Q psy3652         152 GSILPSE------RPGHVLLENWNPLGVVGIISAFNFPVAV--YGWNAAIAL----------------------------  195 (394)
Q Consensus       152 ~~~~~~~------~~~~~~~~~~~P~GVV~~I~p~N~P~~~--~~~~~~~aL----------------------------  195 (394)
                      +......      .++...++.++|+|||++|+|||||+.+  .++++++||                            
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~a~ALaaGN~VVlKps~~~p~t~~~l~~~~~~~  160 (454)
T cd07129          81 DARIDPADPDRQPLPRPDLRRMLVPLGPVAVFGASNFPLAFSVAGGDTASALAAGCPVVVKAHPAHPGTSELVARAIRAA  160 (454)
T ss_pred             cccccccccccCCCCCccceEEeeccceEEEECCCCCchhhhhhhhhHHHHHHcCCeEEEEcCCCCchHHHHHHHHHHHH
Confidence            2221111      1122346789999999999999999987  458999998                            


Q ss_pred             -----------------------------------------hHHHHHh------hhhhhccccCCCCeEEEecCC---CH
Q psy3652         196 -----------------------------------------VGVAVQS------RFGKLLLELGGNNAIIVNEDA---DL  225 (394)
Q Consensus       196 -----------------------------------------~g~~i~~------~~~~~~lElgGk~p~iV~~dA---Dl  225 (394)
                                                               +|+.|++      +++|+++|+|||||+||++||   |+
T Consensus       161 l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa~~~~~~p~~lElGG~n~~iV~~da~~~dl  240 (454)
T cd07129         161 LRATGLPAGVFSLLQGGGREVGVALVKHPAIKAVGFTGSRRGGRALFDAAAARPEPIPFYAELGSVNPVFILPGALAERG  240 (454)
T ss_pred             HHHhCCChhheEEeeCCcHHHHHHHhcCCCccEEEEeCChHHHHHHHHHhhccCccceeEeecCCcCcEEEeCCcchHHH
Confidence                                                     5676654      377999999999999999999   89


Q ss_pred             HHHHHHHHHHhhCcCCCcccCCceEEEecc----------------------------------------c---------
Q psy3652         226 NLAQQCLVFACCGTAGQRCTTTRRLFLHKK----------------------------------------K---------  256 (394)
Q Consensus       226 ~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~----------------------------------------~---------  256 (394)
                      +.|++.+++++|.|+||.|++++|||||++                                        .         
T Consensus       241 ~~aa~~i~~~~~~~~GQ~C~a~~rv~v~~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~~~~~~i~~a~~~~ga~~l~gg  320 (454)
T cd07129         241 EAIAQGFVGSLTLGAGQFCTNPGLVLVPAGPAGDAFIAALAEALAAAPAQTMLTPGIAEAYRQGVEALAAAPGVRVLAGG  320 (454)
T ss_pred             HHHHHHHHHHHhcCCCCeecCCceEEEeCcccHHHHHHHHHHHHhccCCCCCcChHHHHHHHHHHHHHHhcCCcEEEeCC
Confidence            999999999999999999999999999987                                        0         


Q ss_pred             -CCCCCceecCeEEEcCC---CCCcccccccccceEEEEeeCCHHHHHHHHhcCCCCcEEEEEcCC--HHHHHHhhcccc
Q psy3652         257 -IDRPGYFVEPTIVTGLP---HNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKD--VTNLFKWLGPQG  330 (394)
Q Consensus       257 -~~~~g~~~~Ptvl~~v~---~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~~gLsa~v~t~d--~~~a~~~~~~~~  330 (394)
                       ....|+|++|||+....   ++|++++||+||||++|++|+|.||||+++|+++|||++||||+|  .+.+++++  .+
T Consensus       321 ~~~~~g~~~~Ptvl~~~~~~~~~~~i~~~E~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~a~~~~--~~  398 (454)
T cd07129         321 AAAEGGNQAAPTLFKVDAAAFLADPALQEEVFGPASLVVRYDDAAELLAVAEALEGQLTATIHGEEDDLALARELL--PV  398 (454)
T ss_pred             CcCCCCCccCCEEEEccCCccccchhhcccCCCCeEEEEEeCCHHHHHHHHhcCCCCcEEEEEccCchHHHHHHHH--HH
Confidence             01248899999997555   689999999999999999999999999999999999999999999  79999999  77


Q ss_pred             c--ceeEEEEcCCCCCCC--CCCCccC-CCCCCCCCC--chHHHHHhhhhee
Q psy3652         331 S--DCGLINVNIPTNGAE--IGGAFGG-EKYTGGGRE--SGSDSWKQYCRRS  375 (394)
Q Consensus       331 ~--~~g~V~iN~~~~~~~--~~~pfGG-~~~SG~G~~--~g~~~l~~f~~~k  375 (394)
                      +  ++|+|+||.++.+..  +.+|||| +|.||+|++  +|.+++++|+++-
T Consensus       399 l~~~~G~v~iN~~~~~~~~~~~~pfgG~~k~sg~g~~~~~g~~~~~~~~~~~  450 (454)
T cd07129         399 LERKAGRLLFNGWPTGVEVCPAMVHGGPYPATTDPRFTSVGTAAIERFLRPV  450 (454)
T ss_pred             HHhhCcEEEECCCCccccccCCCCCCCCcCCCCCCccccccHHHHHHhcccc
Confidence            8  699999997655544  3789999 999999999  7999999999863

Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids.

>cd07084 ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like

Probab=100.00  E-value=3.1e-58  Score=463.78  Aligned_cols=300  Identities=20%  Similarity=0.195  Sum_probs=265.1

Q ss_pred             HHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhc--cC
Q psy3652          75 HRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTY--SG  152 (394)
Q Consensus        75 ~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~--~~  152 (394)
                      ++|+++|++||+.|+++|.++|.++|+++++.|++++++|++++++|+|||. ++..|+..+++.+++++..+..+  .+
T Consensus         2 ~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-~~~~ev~~~i~~~~~~~~~~~~~~~~~   80 (442)
T cd07084           2 ERALLAADISTKAARRLALPKRADFLARIIQRLAAKSYDIAAGAVLVTGKGW-MFAENICGDQVQLRARAFVIYSYRIPH   80 (442)
T ss_pred             hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHcCCch-hhhhhhcchHHHHHHHHHHHHhccccc
Confidence            6899999999999999999999999999999999999999999999999999 77789999999999999887653  11


Q ss_pred             ccc--CCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh-----------------------------------
Q psy3652         153 SIL--PSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL-----------------------------------  195 (394)
Q Consensus       153 ~~~--~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL-----------------------------------  195 (394)
                      ...  .........+..++|+|||++|+|||||+...++++++||                                   
T Consensus        81 ~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~vvlKps~~~p~~~~~l~~~l~~ag~~P~g~  160 (442)
T cd07084          81 EPGNHLGQGLKQQSHGYRWPYGPVLVIGAFNFPLWIPLLQLAGALAMGNPVIVKPHTAVSIVMQIMVRLLHYAGLLPPED  160 (442)
T ss_pred             cccccCCCCccccceEEeecceeEEEEcCCccHhHHHHHHHHHHHHcCCeEEEECCCCchHHHHHHHHHHHHhCCCCccc
Confidence            111  1111123457789999999999999999999999999998                                   


Q ss_pred             ------------------------------hHHHHHhhh--hhhccccCCCCeEEEecCC-CHHHHHHHHHHHhhCcCCC
Q psy3652         196 ------------------------------VGVAVQSRF--GKLLLELGGNNAIIVNEDA-DLNLAQQCLVFACCGTAGQ  242 (394)
Q Consensus       196 ------------------------------~g~~i~~~~--~~~~lElgGk~p~iV~~dA-Dl~~aa~~i~~~~~~~~GQ  242 (394)
                                                    +|+.|++..  +|+++|+|||||+||++|| |++.|++.+++++|.|+||
T Consensus       161 ~~~v~g~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~a~~~~v~lElgG~~~~iV~~dadd~~~a~~~i~~~~~~~~GQ  240 (442)
T cd07084         161 VTLINGDGKTMQALLLHPNPKMVLFTGSSRVAEKLALDAKQARIYLELAGFNWKVLGPDAQAVDYVAWQCVQDMTACSGQ  240 (442)
T ss_pred             eEEeeCCcHHHHHHHcCCCCCEEEEECCHHHHHHHHHhccCCcEEEeccCcCcEEECCChhhHHHHHHHHHHHHhcccCC
Confidence                                          677777644  4899999999999999999 6999999999999999999


Q ss_pred             cccCCceEEEecc-----------------------------------------c----------C-C------CCCcee
Q psy3652         243 RCTTTRRLFLHKK-----------------------------------------K----------I-D------RPGYFV  264 (394)
Q Consensus       243 ~C~a~~rv~V~~~-----------------------------------------~----------~-~------~~g~~~  264 (394)
                      .|++++|||||++                                         .          . .      ..|+|+
T Consensus       241 ~C~a~~rl~V~~~~i~~~f~~~l~~~~~~~~~g~~~~gpl~~~~~~~~i~~a~~~gga~~~~gg~~~~~~~~~~~~g~~~  320 (442)
T cd07084         241 KCTAQSMLFVPENWSKTPLVEKLKALLARRKLEDLLLGPVQTFTTLAMIAHMENLLGSVLLFSGKELKNHSIPSIYGACV  320 (442)
T ss_pred             eecCCcEEEEeCCccHHHHHHHHHHHHHhcccCccccChhhhHHHHHHHHHHHhcCCcEEEeCCcccccCCCCCcCCccc
Confidence            9999999999998                                         0          0 0      037899


Q ss_pred             cCeEEEcCCCCC---cccccccccceEEEEeeCC--HHHHHHHHhcCCCCcEEEEEcCCHHHHHHhhccccc-ceeEEEE
Q psy3652         265 EPTIVTGLPHNS---RVVHRETFAPIVYVFPFDS--LDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGS-DCGLINV  338 (394)
Q Consensus       265 ~Ptvl~~v~~~~---~i~~eE~FGPvl~v~~~~~--~~eAi~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~-~~g~V~i  338 (394)
                      +|||+.+++++|   ++++||+||||++|++|+|  ++|||+++|+++|||++||||+|.+.+++++  .++ ++|+|||
T Consensus       321 ~Ptvl~~~~~~~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~--~~l~~~G~v~i  398 (442)
T cd07084         321 ASALFVPIDEILKTYELVTEEIFGPFAIVVEYKKDQLALVLELLERMHGSLTAAIYSNDPIFLQELI--GNLWVAGRTYA  398 (442)
T ss_pred             CCeEEEecCcccccchHHheeccCceEEEEEeCCccHHHHHHHHHhCCCCeeEEEEeCCHHHHHHHH--HHHHhcCeEEE
Confidence            999999999997   9999999999999999999  9999999999999999999999999999999  889 9999999


Q ss_pred             cCC-CCCCCCCCCccC-CCCCCCCCCc-hHHHHHhhhheeEE
Q psy3652         339 NIP-TNGAEIGGAFGG-EKYTGGGRES-GSDSWKQYCRRSTV  377 (394)
Q Consensus       339 N~~-~~~~~~~~pfGG-~~~SG~G~~~-g~~~l~~f~~~k~v  377 (394)
                      |.. +....+..|||| .|.||+|++. |.+++++|++...+
T Consensus       399 N~~~~~~~~~~~~~gG~~k~sG~g~~~~g~~~~~~~~~~~~~  440 (442)
T cd07084         399 ILRGRTGVAPNQNHGGGPAADPRGAGIGGPEAIKLVWRCHAE  440 (442)
T ss_pred             CCCCCCCccccccCCCCCCCCCCCccccchHHhhheeeeeee
Confidence            975 455666678877 8899999996 99999999987654

ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway.

>PLN02418 delta-1-pyrroline-5-carboxylate synthase

Probab=100.00  E-value=8.7e-58  Score=481.16  Aligned_cols=313  Identities=20%  Similarity=0.223  Sum_probs=264.0

Q ss_pred             HHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHH------HHHcC--CChHHh----HHHHHHHHHH
Q psy3652          72 QDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLV------SLEMG--KILAEG----IGEVQEFIDI  139 (394)
Q Consensus        72 ~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~------~~e~G--k~~~~a----~~ev~~~~~~  139 (394)
                      +++++++++|++||+.|+.+|..+|.++|++++++|++++++|++++      ++|+|  ||+.++    ..|+..+++.
T Consensus       294 ~~~~~~~~aA~~A~~~W~~~~~~eR~~~L~~~a~~l~~~~~ela~~~~~d~~~~~E~G~~k~~~~~~~~~~~ev~~~~~~  373 (718)
T PLN02418        294 VGAREMAVAARESSRKLQALSSEERKKILLDVADALEANEELIKAENELDVAAAQEAGYEKSLVSRLTLKPGKIASLAAS  373 (718)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhHHHHHHhCCchhHHHHHhccHHHHHHHHHH
Confidence            35999999999999999999999999999999999999999999996      77999  888776    4599999999


Q ss_pred             HHHHHHhhhhccCcccCC--CCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh----------------------
Q psy3652         140 CDYAVGLSRTYSGSILPS--ERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL----------------------  195 (394)
Q Consensus       140 l~~~a~~~~~~~~~~~~~--~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL----------------------  195 (394)
                      ++|+++.. +..+...+.  ...+...++.++|+|||++|+||| |+.+. ++++|||                      
T Consensus       374 ~~~~a~~~-~~~g~~~~~~~~~~~~~~~~~r~PlGVV~~I~Pwn-P~~~~-~kiapALaaGNtVVlKPse~tp~s~~~l~  450 (718)
T PLN02418        374 IRQLADME-DPIGRVLKRTEVADGLVLEKTSCPLGVLLIIFESR-PDALV-QIASLAIRSGNGLLLKGGKEAARSNAILH  450 (718)
T ss_pred             HHHHhcCc-cccCccccccccCCCceEEEEEEeeeEEEEEeCCC-cHHHH-HHHHHHHHhCCEEEEeCCccchHHHHHHH
Confidence            99999884 344444331  122344678899999999999999 99998 8999999                      


Q ss_pred             ---------------------------------------------hHHHHH-hhhhhhccccCCCCeEEEecCCCHHHHH
Q psy3652         196 ---------------------------------------------VGVAVQ-SRFGKLLLELGGNNAIIVNEDADLNLAQ  229 (394)
Q Consensus       196 ---------------------------------------------~g~~i~-~~~~~~~lElgGk~p~iV~~dADl~~aa  229 (394)
                                                                   .+..++ +++||+++|||||||+||++|||++.|+
T Consensus       451 ~l~~eAlP~gv~~~v~nvv~g~~~~g~~L~~~~~v~~V~FTGSt~~i~~~aa~~~k~v~lELGGk~p~iV~~DADld~A~  530 (718)
T PLN02418        451 KVITDAIPKTVGGKLIGLVTSRDEIPDLLKLDDVIDLVIPRGSNKLVSQIKASTKIPVLGHADGICHVYVDKSADMDMAK  530 (718)
T ss_pred             HHHHHHccccCCcceEEEeCCcHHHHHHHhhCCCCCEEEEeCCHHHHHHHHHhcCCCEEEeCCCcceEEEeCCCCHHHHH
Confidence                                                         112222 2578999999999999999999999999


Q ss_pred             HHHHHHhhCcCCCcccCCceEEEecccCCC------------CCceec-----CeEEEcCCCCCcccccccccceEEEEe
Q psy3652         230 QCLVFACCGTAGQRCTTTRRLFLHKKKIDR------------PGYFVE-----PTIVTGLPHNSRVVHRETFAPIVYVFP  292 (394)
Q Consensus       230 ~~i~~~~~~~~GQ~C~a~~rv~V~~~~~~~------------~g~~~~-----Ptvl~~v~~~~~i~~eE~FGPvl~v~~  292 (394)
                      +.+++++|.| ||.|++++|+|||++..+.            .|.-+.     +-++. + ++|++++||+||||++|.+
T Consensus       531 ~~i~~~~~~n-GQ~C~a~~RllVh~~i~d~G~~~~~i~~a~~~Ga~l~Gg~~~~g~l~-~-~~~~i~~eE~FgPv~~i~~  607 (718)
T PLN02418        531 RIVVDAKTDY-PAACNAMETLLVHKDLVQNGGLNDLLVALRSAGVTLYGGPRASKLLN-I-PEAQSFHHEYSSLACTVEI  607 (718)
T ss_pred             HHHHHHhCCC-CCccccCcEEEEeccccccccHHHHHHHHHHCCCEEECCccccCeeC-C-CCchhhhCCcCCeeEEEEE
Confidence            9999999999 9999999999999993221            111110     12343 4 7899999999999999999


Q ss_pred             eCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCC--CCCc--hHHHH
Q psy3652         293 FDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGG--GRES--GSDSW  368 (394)
Q Consensus       293 ~~~~~eAi~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~--G~~~--g~~~l  368 (394)
                      |+|+||||+++|+++|||+++|||+|.+++.+++  .++++|.||||.++.. .+..||||+|.||+  |+++  |++++
T Consensus       608 ~~~~dEAI~~aN~s~yGLsa~V~T~d~~~a~~~a--~~l~aG~V~IN~~~~~-~~~~PfGG~k~SG~stGr~~~~G~~gl  684 (718)
T PLN02418        608 VDDVHAAIDHIHRHGSAHTDCIVTEDSEVAEIFL--RQVDSAAVFHNASTRF-SDGARFGLGAEVGISTGRIHARGPVGV  684 (718)
T ss_pred             ECCHHHHHHHHhcCCCCCeeEEEcCCHHHHHHHH--HhCCeeEEEEeCCCCC-CCCCCCCCcccccccCCcCCCCCHHHH
Confidence            9999999999999999999999999999999999  8899999999987533 45689999999999  9885  99999


Q ss_pred             HhhhheeEEEEecCCcccccccccC
Q psy3652         369 KQYCRRSTVTINHGKEITLAQGIKF  393 (394)
Q Consensus       369 ~~f~~~k~v~~~~~~~~~~~~~~~~  393 (394)
                      ++|++.|++.+--+...+-+||.-|
T Consensus       685 ~~~t~~K~v~~g~g~~~~~~~~~~~  709 (718)
T PLN02418        685 EGLLTTRWILRGNGQVVDGDKGVVY  709 (718)
T ss_pred             HHHhcEEEEEECCCeecCCCCCccc
Confidence            9999999998876554454555443

>PRK00197 proA gamma-glutamyl phosphate reductase; Provisional

Probab=100.00  E-value=2.1e-58  Score=461.46  Aligned_cols=301  Identities=22%  Similarity=0.242  Sum_probs=261.1

Q ss_pred             HHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCChH----HhH--------HHHHHHHH
Q psy3652          71 VQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILA----EGI--------GEVQEFID  138 (394)
Q Consensus        71 ~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~----~a~--------~ev~~~~~  138 (394)
                      .+|+++++++|++||+.|+.+|..+|.++|+++++.|++++++|++++++|+||+..    ++.        .|+..+++
T Consensus         3 ~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~g~~~~~g~~~~~~~~~~~~~~ev~~~~~   82 (417)
T PRK00197          3 MEYLEELGRRAKAASRKLAQLSTAQKNRALLAIADALEANAAEILAANAKDLAAARANGLSAAMLDRLLLTEARIEGIAE   82 (417)
T ss_pred             hhHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHHHHhcCCHHHHHHHHH
Confidence            368999999999999999999999999999999999999999999999998887742    443        58899999


Q ss_pred             HHHHHHHhhhhccCcccCCC--CCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh---------------------
Q psy3652         139 ICDYAVGLSRTYSGSILPSE--RPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL---------------------  195 (394)
Q Consensus       139 ~l~~~a~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL---------------------  195 (394)
                      .+++++++.+.. +...+..  ..+...++.++|+|||++|+||| | .++++++++||                     
T Consensus        83 ~~~~~a~~~~~~-g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~p-~-~~~~~~~~~ALaaGN~vVlKPs~~tp~t~~~l  159 (417)
T PRK00197         83 GLRQVAALPDPV-GEVLDGWTLPNGLRIGRVRVPLGVIGVIYESR-P-NVTVDAAALCLKSGNAVILRGGSEAIHSNRAL  159 (417)
T ss_pred             HHHHHhhcCCCc-cccccceecCCCceEEEEecCceEEEEEcCCC-c-hHHHHHHHHHHHhCCeEEEecChhhhHHHHHH
Confidence            999999877653 3333221  12335678899999999999986 4 67788999998                     


Q ss_pred             -------------------------------------------------hHHHHHh-hhhhhccccCCCCeEEEecCCCH
Q psy3652         196 -------------------------------------------------VGVAVQS-RFGKLLLELGGNNAIIVNEDADL  225 (394)
Q Consensus       196 -------------------------------------------------~g~~i~~-~~~~~~lElgGk~p~iV~~dADl  225 (394)
                                                                       +|+.+++ .++|+++|||||||+||++|||+
T Consensus       160 ~~l~~~~l~~aGlP~gv~~~v~g~~~~~~~~~l~~~~~v~~V~fTGS~~~g~~i~~~a~~~~~lELGGk~p~IV~~dAdl  239 (417)
T PRK00197        160 VAVIQEALEEAGLPADAVQLVETTDRAAVGELLKLDGYVDVIIPRGGAGLIRRVVENATVPVIEHGDGICHIYVDESADL  239 (417)
T ss_pred             HHHHHHHHHHcCcChhhEEEecCCChHHHHHHhccCCCccEEEecCCHHHHHHHHHhcCCCEEeecCCcceEEEeCCCCH
Confidence                                                             7788875 67899999999999999999999


Q ss_pred             HHHHHHHHHHhhCcCCCcccCCceEEEecc--------------cC----CCCC--ceecCeEEEcCCCCCccccccccc
Q psy3652         226 NLAQQCLVFACCGTAGQRCTTTRRLFLHKK--------------KI----DRPG--YFVEPTIVTGLPHNSRVVHRETFA  285 (394)
Q Consensus       226 ~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~--------------~~----~~~g--~~~~Ptvl~~v~~~~~i~~eE~FG  285 (394)
                      +.|++.+++++|.|+| .|++++|+|||++              .+    ...+  ..+.|||+   +++|++++||+||
T Consensus       240 ~~Aa~~iv~~~~~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~~~~~~~~~~~~PTi~---~~~~~i~~eE~FG  315 (417)
T PRK00197        240 DKALKIVLNAKTQRPS-VCNALETLLVHEAIAEEFLPKLAEALAEAGVELRGDEAALALLPDVV---PATEEDWDTEYLD  315 (417)
T ss_pred             HHHHHHHHHhccCCCc-ccccceEEEEEHHHhHHHHHHHHHHHHHCCCeEecCHHHHHhhcccc---cCCcchhhhhhhC
Confidence            9999999999999999 9999999999999              00    0111  11339998   4689999999999


Q ss_pred             ceEEEEeeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCC----C
Q psy3652         286 PIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGG----R  361 (394)
Q Consensus       286 Pvl~v~~~~~~~eAi~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G----~  361 (394)
                      ||++|++|+|+||||+++|+++|||++||||+|.+++++++  .++++|+|+||.++.. .+..||||.|.||+|    +
T Consensus       316 PVl~v~~~~~~deAi~~aN~~~~GL~a~V~t~d~~~~~~~~--~~l~~G~v~VN~~~~~-~~~~p~G~~~~sG~g~~~~~  392 (417)
T PRK00197        316 LILAVKVVDSLDEAIAHINRYGSGHTEAIVTEDYAAAERFL--NEVDSAAVYVNASTRF-TDGGEFGLGAEIGISTQKLH  392 (417)
T ss_pred             ceEEEEEeCCHHHHHHHHHhcCCCCceEEEeCCHHHHHHHH--HhCCeeEEEEeCCCcc-CCCCccccchhheeecCCCc
Confidence            99999999999999999999999999999999999999999  8899999999987543 346899999999999    9


Q ss_pred             CchHHHHHhhhheeEEEEec
Q psy3652         362 ESGSDSWKQYCRRSTVTINH  381 (394)
Q Consensus       362 ~~g~~~l~~f~~~k~v~~~~  381 (394)
                      ++|.+++++|++.|++++..
T Consensus       393 ~~g~~~l~~~~~~k~v~~~~  412 (417)
T PRK00197        393 ARGPMGLEELTTYKYIVLGD  412 (417)
T ss_pred             CCCccchHhhcEEEEEEECC
Confidence            99999999999999998754

>PRK15398 aldehyde dehydrogenase EutE; Provisional

Probab=100.00  E-value=8.2e-58  Score=461.53  Aligned_cols=298  Identities=21%  Similarity=0.254  Sum_probs=252.7

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhh
Q psy3652          69 GNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSR  148 (394)
Q Consensus        69 a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~  148 (394)
                      ...+|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++.      +.++++++...
T Consensus        33 ~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~la~~l~~~~~ela~~~~~E~Gk~~~ea~~------~~~~~~~~~~~  106 (465)
T PRK15398         33 GVFASVDDAVAAAKVAQQRYQQKSLAMRQRIIDAIREALLPHAEELAELAVEETGMGRVEDKI------AKNVAAAEKTP  106 (465)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcHHHHH------HHHHHHHHHhc
Confidence            468999999999999999999999999999999999999999999999999999999988763      23455554432


Q ss_pred             h---ccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh------------------------------
Q psy3652         149 T---YSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL------------------------------  195 (394)
Q Consensus       149 ~---~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL------------------------------  195 (394)
                      .   +......  ..+...+++++|+|||++|+|||||+.+.++++++||                              
T Consensus       107 ~~~~~~~~~~~--~~~~~~~v~~~P~GVV~~I~PwN~P~~~~~~~ia~ALaaGN~VVlKps~~tp~t~~~l~~ll~~~l~  184 (465)
T PRK15398        107 GVEDLTTEALT--GDNGLTLIEYAPFGVIGAVTPSTNPTETIINNAISMLAAGNSVVFSPHPGAKKVSLRAIELLNEAIV  184 (465)
T ss_pred             cccccccCccc--CCCceeEEEecccEEEEEeeCCCCchHHHHHHHHHHHHhCCcEEEECCccchHHHHHHHHHHHHHHH
Confidence            1   1111111  1223457788999999999999999999999999998                              


Q ss_pred             ---------------------------------------hHHHHHhhhhhhccccCCCCeEEEecCCCHHHHHHHHHHHh
Q psy3652         196 ---------------------------------------VGVAVQSRFGKLLLELGGNNAIIVNEDADLNLAQQCLVFAC  236 (394)
Q Consensus       196 ---------------------------------------~g~~i~~~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~  236 (394)
                                                             +|+.+++..+|+++|+|||||+||++|||++.|++.+++++
T Consensus       185 eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGS~~~G~~v~~~~k~~~~elGGk~p~IV~~dADld~Aa~~i~~g~  264 (465)
T PRK15398        185 AAGGPENLVVTVAEPTIETAQRLMKHPGIALLVVTGGPAVVKAAMKSGKKAIGAGAGNPPVVVDETADIEKAARDIVKGA  264 (465)
T ss_pred             HcCCCCCeEEEecCCCHHHHHHHHcCCCccEEEeeCCHHHHHHHHHcCCceeeecCCCceEEEecCCCHHHHHHHHHHhc
Confidence                                                   78888888899999999999999999999999999999999


Q ss_pred             hCcCCCcccCCceEEEecc----------c-----------------CC--------------------CCCcee---cC
Q psy3652         237 CGTAGQRCTTTRRLFLHKK----------K-----------------ID--------------------RPGYFV---EP  266 (394)
Q Consensus       237 ~~~~GQ~C~a~~rv~V~~~----------~-----------------~~--------------------~~g~~~---~P  266 (394)
                      |.|+||.|++++|||||++          .                 +.                    ..|+++   +|
T Consensus       265 ~~n~GQ~C~A~~rvlV~~si~d~f~~~l~~~~~~li~~~~~~~v~~~l~~~~~~~~~~~~g~~~~~i~~~~G~~~~~~~~  344 (465)
T PRK15398        265 SFDNNLPCIAEKEVIVVDSVADELMRLMEKNGAVLLTAEQAEKLQKVVLKNGGTVNKKWVGKDAAKILEAAGINVPKDTR  344 (465)
T ss_pred             ccCCCCcCCCCceEEEeHHHHHHHHHHHHHcCCccCCHHHHHHHHHHHhhcccccchhhhCCCHHHHHHhCCCCCCCCCC
Confidence            9999999999999999999          0                 00                    025555   37


Q ss_pred             eEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcCCCCc--EEEEEcCCHHHHHHhhcccccceeEEEEcCCCCC
Q psy3652         267 TIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGL--SSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNG  344 (394)
Q Consensus       267 tvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~~gL--sa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~  344 (394)
                      ||+.+++++|++++||+||||++|++|+|+||||+++|+++|||  ++||||+|..++++++  .++++|+|+||.++. 
T Consensus       345 tvl~~v~~d~~i~~eE~FGPVl~V~~~~d~deAi~~aN~~~yGL~hs~~IfT~d~~~a~~~a--~~l~~G~V~iN~~~~-  421 (465)
T PRK15398        345 LLIVETDANHPFVVTELMMPVLPVVRVKDVDEAIALAVKLEHGNRHTAIMHSRNVDNLNKMA--RAIQTSIFVKNGPSY-  421 (465)
T ss_pred             EEEecCCCCCchhcccccCceEEEEEeCCHHHHHHHHHhcccCCcceEEEecCCHHHHHHHH--HhCCceEEEECCCCc-
Confidence            99999999999999999999999999999999999999999998  9999999999999999  889999999998642 


Q ss_pred             CCCCCCccCCCCCCC--C-CCc-hHHHHHhhhheeEEEE
Q psy3652         345 AEIGGAFGGEKYTGG--G-RES-GSDSWKQYCRRSTVTI  379 (394)
Q Consensus       345 ~~~~~pfGG~~~SG~--G-~~~-g~~~l~~f~~~k~v~~  379 (394)
                        +.+||||+|.|.+  | ..+ |..+-+.|+..+.+++
T Consensus       422 --~~~p~gg~~~s~~~~~~~~g~~~~~~~~~~~~~~~~~  458 (465)
T PRK15398        422 --AGLGLGGEGFTTFTIATPTGEGVTSARTFTRRRRCVL  458 (465)
T ss_pred             --cccCcCCCCCceeeecccCCCCccchhhhhhheeecc
Confidence              5689999999987  2 222 3344566666555544

>cd07081 ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins

Probab=100.00  E-value=3.7e-57  Score=453.35  Aligned_cols=300  Identities=18%  Similarity=0.212  Sum_probs=247.1

Q ss_pred             HHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCChHHhHHHHHHHHH--HHHHHHHhhhhcc
Q psy3652          74 YHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFID--ICDYAVGLSRTYS  151 (394)
Q Consensus        74 v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~--~l~~~a~~~~~~~  151 (394)
                      +++|+++|++||+.|+.+|+++|.++|++++++|++++++|++++++|+|||+.+++.++...+.  ..+++++.   ..
T Consensus         1 ~~~Ai~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~ea~~~~~~~~~~~~~~~~~~~---~~   77 (439)
T cd07081           1 LDDAVAAAKVAQQGLSCKSQEMVDLIFRAAAEAAEDARIDLAKLAVSETGMGRVEDKVIKNHFAAEYIYNVYKDE---KT   77 (439)
T ss_pred             CHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHhcc---cc
Confidence            47899999999999999999999999999999999999999999999999999999876655544  23333321   12


Q ss_pred             CcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh------------------------------------
Q psy3652         152 GSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL------------------------------------  195 (394)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL------------------------------------  195 (394)
                      +...+.. .+...++.++|+|||++|+|||||+.+..+++++||                                    
T Consensus        78 ~~~~~~~-~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~~l~~aG~P~  156 (439)
T cd07081          78 CGVLTGD-ENGGTLIIAEPIGVVASITPSTNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAATLLLQAAVAAGAPE  156 (439)
T ss_pred             CceecCC-CCCceEEEEecceEEEEECCCcchHHHHHHHHHHHHhcCCeEEEECCccchHHHHHHHHHHHHHHHHcCCCh
Confidence            2222221 133457889999999999999999999999999999                                    


Q ss_pred             ---------------------------------hHHHHHhhhhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCC
Q psy3652         196 ---------------------------------VGVAVQSRFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQ  242 (394)
Q Consensus       196 ---------------------------------~g~~i~~~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ  242 (394)
                                                       +.+..++++||+++|+|||||+||++|||+|.|++.+++++|.|+||
T Consensus       157 gvv~~v~g~~~~~g~~L~~~~~V~~V~FTGs~~v~~~aa~~~k~~~lElGGk~p~IV~~dADl~~Aa~~iv~~~~~~~GQ  236 (439)
T cd07081         157 NLIGWIDNPSIELAQRLMKFPGIGLLLATGGPAVVKAAYSSGKPAIGVGAGNTPVVIDETADIKRAVQSIVKSKTFDNGV  236 (439)
T ss_pred             hhEEEEcCCCHHHHHHHHcCCCCCEEEEECCHHHHHHHHhcCCCEEEEcCCCCeEEEcCCCCHHHHHHHHHHHHhcCCCC
Confidence                                             22333346789999999999999999999999999999999999999


Q ss_pred             cccCCceEEEecc--------------------------------------cCC--------CCCceecCe---EEEcCC
Q psy3652         243 RCTTTRRLFLHKK--------------------------------------KID--------RPGYFVEPT---IVTGLP  273 (394)
Q Consensus       243 ~C~a~~rv~V~~~--------------------------------------~~~--------~~g~~~~Pt---vl~~v~  273 (394)
                      .|++.+|+|||++                                      ...        ..|+|+.||   ++.+++
T Consensus       237 ~C~a~~rv~V~~~i~d~f~~~l~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~gg~~~~~~~~~G~~~~pt~~~i~~~~~  316 (439)
T cd07081         237 ICASEQSVIVVDSVYDEVMRLFEGQGAYKLTAEELQQVQPVILKNGDVNRDIVGQDAYKIAAAAGLKVPQETRILIGEVT  316 (439)
T ss_pred             CCCCCCEEEEcHHHHHHHHHHHHHcCCccCCHHHHHHHHHHHHhcCCcCCcccCCCHHHHHHHcCCccCCCceEEEEecC
Confidence            9999999999998                                      000        137889998   998888


Q ss_pred             --CCCcccccccccceEEEEeeCCHHHHHHHHhcC----CCCcEEEEEcCC---HHHHHHhhcccccceeEEEEcCCCCC
Q psy3652         274 --HNSRVVHRETFAPIVYVFPFDSLDEAITWNNEV----KQGLSSSIFTKD---VTNLFKWLGPQGSDCGLINVNIPTNG  344 (394)
Q Consensus       274 --~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~----~~gLsa~v~t~d---~~~a~~~~~~~~~~~g~V~iN~~~~~  344 (394)
                        ++|++++||+||||++|++|+|+||||+++|++    +|||+++|||+|   .+++++++  .++++|.|+||.++..
T Consensus       317 ~~~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~n~~~~GLsa~V~T~d~~~~~~a~~~a--~~l~~G~V~iN~~~~~  394 (439)
T cd07081         317 SLAEHEPFAHEKLSPVLAMYRAANFADADAKALALKLEGGCGHTSAMYSDNIKAIENMNQFA--NAMKTSRFVKNGPCSQ  394 (439)
T ss_pred             CCCCCchhhhCccCceEEEEEcCCHHHHHHHHHHHhhccCCCceEEEECCCcchHHHHHHHH--hhCCceEEEEeCCccc
Confidence              999999999999999999999999999999975    799999999999   99999999  8899999999976522


Q ss_pred             CCCC--CCccCCCCC--CCCCCchH-----HHHHhhhheeEEEE
Q psy3652         345 AEIG--GAFGGEKYT--GGGRESGS-----DSWKQYCRRSTVTI  379 (394)
Q Consensus       345 ~~~~--~pfGG~~~S--G~G~~~g~-----~~l~~f~~~k~v~~  379 (394)
                      ...+  -.|||++.+  |.|.++|.     .+..+|+++|+|.+
T Consensus       395 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  438 (439)
T cd07081         395 GGLGDLYNFRGWPSMTLGCGTWGGNSVSENVGPKHLVNLKTVAL  438 (439)
T ss_pred             cccccccCCCCCeeEeeecCCCCCCCcCCCCChHhhheeeeeec
Confidence            2222  356666655  33333222     35788999888865

Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway.

>TIGR02288 PaaN_2 phenylacetic acid degradation protein paaN

Probab=100.00  E-value=3.8e-56  Score=454.16  Aligned_cols=311  Identities=19%  Similarity=0.232  Sum_probs=262.0

Q ss_pred             eecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCChHHhHH--
Q psy3652          54 SINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIG--  131 (394)
Q Consensus        54 v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~--  131 (394)
                      =+||+|++++++++.++.   ++++++|++||+.|+.+++.+|.++|++++++|++++++|++++++|+|||+.+++.  
T Consensus        69 e~~P~t~~~~~~~~~~~~---~~av~aA~~A~~~W~~~~~~~R~~vL~~~a~~l~~~~~elA~~~~~etGk~~~~a~e~g  145 (551)
T TIGR02288        69 ERSPYGVELGVTYPQCDG---DALLDAAHAALPGWRDAGARARAGVCLEILQRLNARSFEIAHAVMHTTGQAFMMAFQAG  145 (551)
T ss_pred             ccCCCCCCEEEEEcCCCH---HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHHHhcc
Confidence            359999999999999996   899999999999999999999999999999999999999999999999999988853  


Q ss_pred             ---HHHHHHHHHHHHHHhhhhccCccc---CCCCCCc---eeEeeeccceeEEEEccCCchhHhHHHHHHHHh-------
Q psy3652         132 ---EVQEFIDICDYAVGLSRTYSGSIL---PSERPGH---VLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL-------  195 (394)
Q Consensus       132 ---ev~~~~~~l~~~a~~~~~~~~~~~---~~~~~~~---~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL-------  195 (394)
                         ++.+.++.++|+++...++.+...   +....+.   .....++|+|||++|+|||||+.+..+++++||       
T Consensus       146 kp~~~~r~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vI~PwNfP~~~~~~~l~~ALaaGN~VV  225 (551)
T TIGR02288       146 GPHAQDRGLEAVAYAYREMSRIPETAVWEKPQGKNDPLKLKKRFTIVPRGIALVIGCSTFPTWNTYPGLFASLATGNPVL  225 (551)
T ss_pred             ChHHHHHHHHHHHHHHHHHHhccCcccccccCCCCCcccccceEEEEecCeEEEEcCcccHHHHHHHHHHHHHHcCCeEE
Confidence               778889999999988877665432   2211111   112368999999999999999999999999998       


Q ss_pred             ---------------------------------------------------------------hHHHHHhh--hhhhccc
Q psy3652         196 ---------------------------------------------------------------VGVAVQSR--FGKLLLE  210 (394)
Q Consensus       196 ---------------------------------------------------------------~g~~i~~~--~~~~~lE  210 (394)
                                                                                     +|+.|++.  .+++++|
T Consensus       226 lKPs~~tpl~~~~~~~~l~e~l~eAGlP~gvv~lv~g~~g~~~~~~L~~~p~v~~I~FTGSt~~G~~I~~~aa~~~v~lE  305 (551)
T TIGR02288       226 VKPHPGAILPLALTVQVAREVLGEAGFDPNLVTLAAFDPGHEAAQRLATDPAVRIIDFTGSNAFGQWLEQNARQAQVYTE  305 (551)
T ss_pred             EECCcccchhHHHHHHHHHHHHHHcCcChhHEEEecCCCcHHHHHHHHhCCCccEEEEECCHHHHHHHHHhcccCcEEee
Confidence                                                                           67777763  3689999


Q ss_pred             cCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc-----------------------------------
Q psy3652         211 LGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK-----------------------------------  255 (394)
Q Consensus       211 lgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~-----------------------------------  255 (394)
                      ||||||+||++|||++.+++.+++++|.|+||.|++++|||||++                                   
T Consensus       306 lGGknp~IV~~dADld~aa~~i~~~~f~~sGQ~Cta~~ri~V~~~~i~~~~g~~i~def~~~L~~~~~~lvGdp~~~~~~  385 (551)
T TIGR02288       306 KAGVNTVIIESTDDYKAMLRNLAFSLSLYSGQMCTTTQAILVPRDGIRTDQGRKSYDEVAADLATAIDGLLGDPARATAV  385 (551)
T ss_pred             cCCcCeEEEcCCCCHHHHHHHHHHHHHhhCCCCCCCCCEEEEeccccccccchhHHHHHHHHHHHHHHHhcCCccccccc
Confidence            999999999999999999999999999999999999999999973                                   


Q ss_pred             ----------------------cC-----C---CCC-ceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHh
Q psy3652         256 ----------------------KI-----D---RPG-YFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNN  304 (394)
Q Consensus       256 ----------------------~~-----~---~~g-~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n  304 (394)
                                            ..     .   ..| +|++|||+....++|++++||+||||++|++|+|+||||+++|
T Consensus       386 ~Gplis~~~~~ri~~a~~~G~v~~gG~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPVl~V~~~~d~deAi~~aN  465 (551)
T TIGR02288       386 LGAIQSPDTLARIAEARALGEVLLASTKIEHPEFPGARVRTPLLLKCDAADEAAYMQERFGPIAFVVAVDDGAHAVELAR  465 (551)
T ss_pred             ccCcCCHHHHHHHHHHHhCCCEEEcCccCCCCCCCCCEEeccEEEEcCCCCCHHHhCCCcCCEEEEEEECCHHHHHHHHh
Confidence                                  00     0   024 5889999943334999999999999999999999999999999


Q ss_pred             cC--CCC-cEEEEEcCCHHHHHHhhccccc----------ceeEEEEcCCCCCCCCCCCccCCCCCCCCCCc-hHHHHHh
Q psy3652         305 EV--KQG-LSSSIFTKDVTNLFKWLGPQGS----------DCGLINVNIPTNGAEIGGAFGGEKYTGGGRES-GSDSWKQ  370 (394)
Q Consensus       305 ~~--~~g-Lsa~v~t~d~~~a~~~~~~~~~----------~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~-g~~~l~~  370 (394)
                      ++  +|| |+++|||+|.++++++.  .++          ++|.|+||.+       .+|++.+.||..... ....--.
T Consensus       466 ~~~~~~G~Lta~VfT~d~~~~~~~~--~~~~~~~~~l~iN~~G~v~vN~~-------~~~~~~~~sg~n~~a~~~~~~~~  536 (551)
T TIGR02288       466 RSVREKGAMTVGAYTTDPEVVDAVQ--EAAWDAAVALSLNLTGGVFVNQS-------AAFSDFHGTGGNPAANASLSDGA  536 (551)
T ss_pred             cCCCCCCCceEEEEeCCHHHHHHHH--HHHHHhccCeeecCCceEEEccC-------CCCCCCCCCCCCCccCCcccchh
Confidence            98  566 99999999999999999  666          6677777753       578899999876443 3344445


Q ss_pred             hhheeE
Q psy3652         371 YCRRST  376 (394)
Q Consensus       371 f~~~k~  376 (394)
                      |...+-
T Consensus       537 ~~~~r~  542 (551)
T TIGR02288       537 FVANRF  542 (551)
T ss_pred             hhhcce
Confidence            654443

This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278.

>cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family

Probab=100.00  E-value=7.8e-56  Score=446.80  Aligned_cols=302  Identities=38%  Similarity=0.666  Sum_probs=273.3

Q ss_pred             HHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCcc
Q psy3652          75 HRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSI  154 (394)
Q Consensus        75 ~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~  154 (394)
                      ++++++|++|++.|+.+|.++|.++|+++++.|.+++++|+++++.|+||+..++..|+..+++.+++++...+.+.+..
T Consensus         1 ~~av~~a~~a~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~etG~~~~~~~~ei~~~i~~l~~~~~~~~~~~~~~   80 (432)
T cd07078           1 DAAVAAARAAFKAWAALPPAERAAILRKLADLLEERREELAALETLETGKPIEEALGEVARAADTFRYYAGLARRLHGEV   80 (432)
T ss_pred             CHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence            36899999999999999999999999999999999999999999999999999999999999999999998887765543


Q ss_pred             cCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh---------------------------------------
Q psy3652         155 LPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL---------------------------------------  195 (394)
Q Consensus       155 ~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL---------------------------------------  195 (394)
                      ......+...+.+++|+|||++|+|||||+...++.+++||                                       
T Consensus        81 ~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~vilkps~~~~~~~~~l~~~l~~ag~p~~~~~~~~  160 (432)
T cd07078          81 IPSPDPGELAIVRREPLGVVGAITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALLLAELLAEAGLPPGVLNVVT  160 (432)
T ss_pred             ccccCCCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCCcCcEEEEe
Confidence            22222345567789999999999999999999999999998                                       


Q ss_pred             --------------------------hHHHHHh----hhhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCccc
Q psy3652         196 --------------------------VGVAVQS----RFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCT  245 (394)
Q Consensus       196 --------------------------~g~~i~~----~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~  245 (394)
                                                +|+.+.+    +++|+++|+|||||+||++|+|++.|++.+++++|.++||.|+
T Consensus       161 ~~~~~~~~~l~~~~~i~~v~ftGs~~~~~~v~~~a~~~~~~~~~e~gg~~~~iV~~~ad~~~aa~~i~~~~~~~~Gq~C~  240 (432)
T cd07078         161 GDGDEVGAALASHPRVDKISFTGSTAVGKAIMRAAAENLKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAFGNAGQVCT  240 (432)
T ss_pred             cCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhccCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCcc
Confidence                                      5555544    4578999999999999999999999999999999999999999


Q ss_pred             CCceEEEecc------------------------------------------------------cC----CC--CCceec
Q psy3652         246 TTRRLFLHKK------------------------------------------------------KI----DR--PGYFVE  265 (394)
Q Consensus       246 a~~rv~V~~~------------------------------------------------------~~----~~--~g~~~~  265 (394)
                      ++++||||++                                                      ..    ..  .|.|+.
T Consensus       241 a~~~i~v~~~~~~~~~~~L~~~l~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~gg~~~~~~~g~~~~  320 (432)
T cd07078         241 AASRLLVHESIYDEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLAYIEDAKAEGAKLLCGGKRLEGGKGYFVP  320 (432)
T ss_pred             CCceEEEcHHHHHHHHHHHHHHHHccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCcEEc
Confidence            9999999998                                                      00    11  378999


Q ss_pred             CeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCC
Q psy3652         266 PTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGA  345 (394)
Q Consensus       266 Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~  345 (394)
                      |||+.+++++++++++|+||||++|++|+|+||||+++|++++||+++|||+|.+.+++++  .++++|.|+||......
T Consensus       321 Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~~l~~~i~t~d~~~~~~~~--~~~~~g~v~iN~~~~~~  398 (432)
T cd07078         321 PTVLTDVDPDMPIAQEEIFGPVLPVIPFKDEEEAIELANDTEYGLAAGVFTRDLERALRVA--ERLEAGTVWINDYSVGA  398 (432)
T ss_pred             cEEEecCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHH--HhcCcceEEECCCCCCC
Confidence            9999999999999999999999999999999999999999999999999999999999999  78999999999876555


Q ss_pred             CCCCCccCCCCCCCCCCchHHHHHhhhheeEEE
Q psy3652         346 EIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVT  378 (394)
Q Consensus       346 ~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~  378 (394)
                      .+..||||+|.||+|+++|++++++|++.|++.
T Consensus       399 ~~~~pfgG~~~sg~g~~~g~~~~~~~~~~k~v~  431 (432)
T cd07078         399 EPSAPFGGVKQSGIGREGGPYGLEEYTEPKTVT  431 (432)
T ss_pred             CCCCCcCCcCcCcCCccchHHHHHHhhceEEEE
Confidence            678999999999999999999999999999885

The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer

>cd07079 ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19

Probab=100.00  E-value=5.7e-57  Score=449.69  Aligned_cols=293  Identities=23%  Similarity=0.232  Sum_probs=253.0

Q ss_pred             HHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCChH----HhH--------HHHHHHHHHHHHH
Q psy3652          76 RCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILA----EGI--------GEVQEFIDICDYA  143 (394)
Q Consensus        76 ~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~----~a~--------~ev~~~~~~l~~~  143 (394)
                      ..+++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+||+..    ++.        .|+..+++.++++
T Consensus         2 ~~~~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~gk~~e~G~~~a~~~~l~~~~~ev~~~~~~~~~~   81 (406)
T cd07079           2 ELAKRAKAASRALATLSTEQKNAALLAIADALEANRDEILEANAKDLAAAREAGLSEALLDRLLLTPERIEAMAEGLRQV   81 (406)
T ss_pred             hHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhchHHHHHHhhhhHHHHHHcCCCHHHHhHhcCCHHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999999999999877777643    332        5899999999999


Q ss_pred             HHhhhhccCcccCCC--CCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh--------------------------
Q psy3652         144 VGLSRTYSGSILPSE--RPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL--------------------------  195 (394)
Q Consensus       144 a~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL--------------------------  195 (394)
                      ++..+. .+...+..  ..+...++.++|+|||++|+|| +| .+.++++++||                          
T Consensus        82 a~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~  158 (406)
T cd07079          82 AALPDP-VGEVLRGWTLPNGLQIEKVRVPLGVIGIIYES-RP-NVTVDAAALCLKSGNAVILRGGSEALHSNRALVEIIQ  158 (406)
T ss_pred             HhcCCC-CcccccceeccCccceeEEecceEEEEEecCC-Cc-chHHHHHHHHHHhCCEEEEeCCchhhhHHHHHHHHHH
Confidence            877543 23332221  1123457789999999999996 56 67889999998                          


Q ss_pred             --------------------------------------------hHHHHHh-hhhhhccccCCCCeEEEecCCCHHHHHH
Q psy3652         196 --------------------------------------------VGVAVQS-RFGKLLLELGGNNAIIVNEDADLNLAQQ  230 (394)
Q Consensus       196 --------------------------------------------~g~~i~~-~~~~~~lElgGk~p~iV~~dADl~~aa~  230 (394)
                                                                  +|+.|++ .++|+++|||||||+||++|||++.|++
T Consensus       159 ~~l~~aG~P~gvv~~v~g~~~~~~~~~l~~~~~v~~i~fTGS~~~G~~i~~~a~~pv~lELGGk~p~IV~~dADl~~Aa~  238 (406)
T cd07079         159 EALEEAGLPEDAVQLIPDTDREAVQELLKLDDYIDLIIPRGGAGLIRFVVENATIPVIKHGDGNCHVYVDESADLEMAVR  238 (406)
T ss_pred             HHHHHcCCCcccEEEecCCChHHHHHHHcCCCCccEEEeCCCHHHHHHHHHhcCCCEEeecCCcceEEEeCCCCHHHHHH
Confidence                                                        7788874 5789999999999999999999999999


Q ss_pred             HHHHHhhCcCCCcccCCceEEEeccc------------------CCCC---CceecCeEEEcCCCCCcccccccccceEE
Q psy3652         231 CLVFACCGTAGQRCTTTRRLFLHKKK------------------IDRP---GYFVEPTIVTGLPHNSRVVHRETFAPIVY  289 (394)
Q Consensus       231 ~i~~~~~~~~GQ~C~a~~rv~V~~~~------------------~~~~---g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~  289 (394)
                      .+++++|.|+| .|++++|||||++.                  +...   ..|++||    ++++|++++||+||||++
T Consensus       239 ~i~~~~f~n~G-~C~a~~rv~V~~si~d~f~~~l~~~~~~~ga~~~~g~~~~~~~~pt----v~~d~~i~~eE~FGPVl~  313 (406)
T cd07079         239 IVVNAKTQRPS-VCNALETLLVHRDIAEEFLPKLAEALREAGVELRGDEETLAILPGA----KPATEEDWGTEYLDLILA  313 (406)
T ss_pred             HHHHcccCCCc-ccccceeEEEeHHHHHHHHHHHHHHHHHCCCEEecCHHHHHhcccc----cCCCcchhhhhhhCceeE
Confidence            99999999999 99999999999990                  0011   1367788    788999999999999999


Q ss_pred             EEeeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCC----CCCchH
Q psy3652         290 VFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGG----GRESGS  365 (394)
Q Consensus       290 v~~~~~~~eAi~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~----G~~~g~  365 (394)
                      |++|+|+||||+++|+++|||++||||+|.+.+++++  .++++|.|+||+++.. .+..||||.+.||+    |+++|.
T Consensus       314 v~~~~~~deAi~~aN~~~~GLsa~ift~d~~~a~~~~--~~~~~G~v~iN~~~~~-~~~~pfg~~~~sG~~~~~g~~~g~  390 (406)
T cd07079         314 VKVVDSLDEAIAHINRYGSGHTEAIVTENYETAERFL--REVDSAAVYVNASTRF-TDGGEFGLGAEIGISTQKLHARGP  390 (406)
T ss_pred             EEEeCCHHHHHHHHHHhCCccccEeeeCCHHHHHHHH--HhCCeeEEEEeCCCcc-cCCCccccceeeeeecCCCcCCCC
Confidence            9999999999999999999999999999999999999  8899999999986543 34679999999998    899999


Q ss_pred             HHHHhhhheeEEEE
Q psy3652         366 DSWKQYCRRSTVTI  379 (394)
Q Consensus       366 ~~l~~f~~~k~v~~  379 (394)
                      +++++|++.|+++.
T Consensus       391 ~~l~~~~~~k~i~~  404 (406)
T cd07079         391 MGLEELTTYKYIVR  404 (406)
T ss_pred             cChHHhcEEEEEEe
Confidence            99999999999864

Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1).

>cd07127 ALDH_PAD-PaaZ Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like

Probab=100.00  E-value=6.1e-55  Score=446.22  Aligned_cols=330  Identities=18%  Similarity=0.217  Sum_probs=274.8

Q ss_pred             cCCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCCh
Q psy3652          47 ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKIL  126 (394)
Q Consensus        47 ~~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~  126 (394)
                      .++...+++||+|++++++++.+   |++++|++|++||+.|+.+|+++|.++|++++++|++++++|++++++|+||++
T Consensus        62 ~~~~~~~~~~P~~~~l~~~~~~a---dv~~ai~aA~~A~~~W~~~~~~~R~~il~~~a~~l~~~~~ela~a~~~e~Gk~~  138 (549)
T cd07127          62 ASGWVGGEVSPYGVELGVTYPQC---DPDALLAAARAAMPGWRDAGARARAGVCLEILQRLNARSFEMAHAVMHTTGQAF  138 (549)
T ss_pred             CCCCeeeeECCCCCcEEEEEchH---HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHCCCH
Confidence            46788999999999999999988   899999999999999999999999999999999999999999999999999999


Q ss_pred             HHhHH-----HHHHHHHHHHHHHHhhhhccCccc---CCCC--C-CceeEeeeccceeEEEEccCCchhHhHHHHHHHHh
Q psy3652         127 AEGIG-----EVQEFIDICDYAVGLSRTYSGSIL---PSER--P-GHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL  195 (394)
Q Consensus       127 ~~a~~-----ev~~~~~~l~~~a~~~~~~~~~~~---~~~~--~-~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL  195 (394)
                      .++..     |++++++.++|+++....+.+...   +..+  + .......++|+|||++|+|||||+.....+++++|
T Consensus       139 ~~a~qa~~~~evd~a~e~~~~a~~~~~~~~~~~~w~~~~~~~~~l~~~k~~~~~P~GVv~vI~p~nfP~~~~~~~i~~AL  218 (549)
T cd07127         139 MMAFQAGGPHAQDRGLEAVAYAWREMSRIPPTAEWEKPQGKHDPLAMEKTFTVVPRGVALVIGCSTFPTWNGYPGLFASL  218 (549)
T ss_pred             HHHHhcccHHHHHHHHHHHHHHHHHHHhccccccccCCCCCcccccccceeEEecccEEEEEeCcCChHHHHHHHHHHHH
Confidence            88852     899999999999988877654322   1111  0 01112368999999999999999999888888888


Q ss_pred             ----------------------------------------------------------------------hHHHHHh--h
Q psy3652         196 ----------------------------------------------------------------------VGVAVQS--R  203 (394)
Q Consensus       196 ----------------------------------------------------------------------~g~~i~~--~  203 (394)
                                                                                            +|+.|.+  .
T Consensus       219 aaGN~VVvKPs~~a~ls~~~~~~~i~~~l~eAGlP~gvv~~v~g~~~~~~~~~L~~~p~v~~I~FTGS~~~G~~i~~~a~  298 (549)
T cd07127         219 ATGNPVIVKPHPAAILPLAITVQVAREVLAEAGFDPNLVTLAADTPEEPIAQTLATRPEVRIIDFTGSNAFGDWLEANAR  298 (549)
T ss_pred             hcCCeEEEECCcccchhHHHHHHHHHHHHHHcCcCcccEEEEeCCCcHHHHHHHHhCCCCCEEEEECCHHHHHHHHHHhc
Confidence                                                                                  6777765  3


Q ss_pred             hhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc----------------------------
Q psy3652         204 FGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK----------------------------  255 (394)
Q Consensus       204 ~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~----------------------------  255 (394)
                      .+++++|+|||||+||++|||++.+++.+++++|.|+||.|++++|||||++                            
T Consensus       299 ~~~v~~ElGGkn~~IV~~dADl~~aa~~i~~~~f~~sGQ~C~a~~ri~V~~s~i~~~~g~~i~d~f~~~L~~~~~~l~Gd  378 (549)
T cd07127         299 QAQVYTEKAGVNTVVVDSTDDLKAMLRNLAFSLSLYSGQMCTTPQNIYVPRDGIQTDDGRKSFDEVAADLAAAIDGLLAD  378 (549)
T ss_pred             cCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHccCCCCCCCCCEEEEECCccccccchhHHHHHHHHHHHHHHHhcCC
Confidence            4689999999999999999999999999999999999999999999999973                            


Q ss_pred             -----------------------------cCC--------CCC-ceecCeEEEcCCCCCcccccccccceEEEEeeCCHH
Q psy3652         256 -----------------------------KID--------RPG-YFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLD  297 (394)
Q Consensus       256 -----------------------------~~~--------~~g-~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~  297 (394)
                                                   ...        ..| +++.|||+.+++++|++++||+||||++|++|+|.|
T Consensus       379 p~~~~~~~Gpli~~~~~~ri~~a~~~g~vl~gg~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPVl~V~~~~d~~  458 (549)
T cd07127         379 PARAAALLGAIQSPDTLARIAEARQLGEVLLASEAVAHPEFPDARVRTPLLLKLDASDEAAYAEERFGPIAFVVATDSTD  458 (549)
T ss_pred             ccccccccCCcCCHHHHHHHHHHHhCCCEEEcCCcCCCcCCCCceEEeCEEEEeCCCCCHHHcCCCcCceEEEEEeCCHH
Confidence                                         000        024 456999998888999999999999999999999999


Q ss_pred             HHHHHHhcCC--C-CcEEEEEcCCHHHHHHhhcccccceeEEEEcCCC-CCCCCCCCccCCCCCCCCCCc-hHHHHHhhh
Q psy3652         298 EAITWNNEVK--Q-GLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPT-NGAEIGGAFGGEKYTGGGRES-GSDSWKQYC  372 (394)
Q Consensus       298 eAi~~~n~~~--~-gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~-~~~~~~~pfGG~~~SG~G~~~-g~~~l~~f~  372 (394)
                      |||+++|++.  + ||+++|||+|...++++.++..-..|+++||.-. .+....+||||++.||..... .......|.
T Consensus       459 eai~~an~~~~~~ggLt~sVfs~D~~~~~~~~~~~~~~~~~~~iN~tg~v~~~q~~~Fg~~~~sg~n~~a~~~~~~~~fv  538 (549)
T cd07127         459 HSIELARESVREHGAMTVGVYSTDPEVVERVQEAALDAGVALSINLTGGVFVNQSAAFSDFHGTGANPAANAALTDGAFV  538 (549)
T ss_pred             HHHHHHHhcccCCCCceEEEEcCCHHHHHHHHHHHHHhcCcEEEcCCceEEEecCcCCCCCCCCCCCcccccccchhhhh
Confidence            9999999984  4 6999999999999999995433344599999421 234444679999999987544 445556676


Q ss_pred             heeEEEE
Q psy3652         373 RRSTVTI  379 (394)
Q Consensus       373 ~~k~v~~  379 (394)
                      ..+-.++
T Consensus       539 ~~r~~~~  545 (549)
T cd07127         539 ANRFRVV  545 (549)
T ss_pred             hcceEEE
Confidence            5554333

Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes.

>PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-54  Score=469.15  Aligned_cols=310  Identities=20%  Similarity=0.218  Sum_probs=266.4

Q ss_pred             EEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCChHHhHH-HHHHHHHHHHHH
Q psy3652          65 SVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIG-EVQEFIDICDYA  143 (394)
Q Consensus        65 ~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~  143 (394)
                      +...++.+|++++|++|++||+.|+++|.++|.++|+++++.|++++++|++++++|+|||..+++. +...+++.++++
T Consensus         5 ~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~EtGk~~~e~~~~~~~~~~~~~~~~   84 (862)
T PRK13805          5 EMAVTNVAELDALVEKAKKAQEEFATFTQEQVDKIVRAAALAALDARIPLAKMAVEETGRGVVEDKVIKNHFASEYIYNS   84 (862)
T ss_pred             ccCCCCHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHH
Confidence            4566899999999999999999999999999999999999999999999999999999999998874 444444444444


Q ss_pred             HHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh----------------------------
Q psy3652         144 VGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL----------------------------  195 (394)
Q Consensus       144 a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL----------------------------  195 (394)
                      +. .++..+.. . ..++...++.++|+|||++|+|||||+.+..+++++||                            
T Consensus        85 ~~-~~~~~g~~-~-~~~~~~~~~~~~P~GVv~~I~pwn~P~~~~~~~~~~ALaaGN~vVlKps~~a~~t~~~~~~l~~~~  161 (862)
T PRK13805         85 YK-DEKTVGVI-E-EDDEFGIIEIAEPVGVIAGITPTTNPTSTAIFKALIALKTRNPIIFSFHPRAQKSSIAAAKIVLDA  161 (862)
T ss_pred             hc-CCCccccc-C-cCCCCCeEEEeecceEEEEEeCCCChhHHHHHHHHHHHHhCCcEEEECCcchHHHHHHHHHHHHHH
Confidence            32 12222221 1 11234467789999999999999999999999999999                            


Q ss_pred             -----------------------------------------hHHHHHhhhhhhccccCCCCeEEEecCCCHHHHHHHHHH
Q psy3652         196 -----------------------------------------VGVAVQSRFGKLLLELGGNNAIIVNEDADLNLAQQCLVF  234 (394)
Q Consensus       196 -----------------------------------------~g~~i~~~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~  234 (394)
                                                               +++..+++++|+++|+|||||+||++|||++.|++.|++
T Consensus       162 l~~aG~p~g~v~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v~~~a~~~~~pv~~e~gGk~p~iV~~dADl~~Aa~~i~~  241 (862)
T PRK13805        162 AVAAGAPKDIIQWIEEPSVELTNALMNHPGIALILATGGPGMVKAAYSSGKPALGVGAGNVPAYIDKTADIKRAVNDILL  241 (862)
T ss_pred             HHHcCcCcccEEEecCCCHHHHHHHHcCCCccEEEecCCHHHHHHHHhcCCCeEEECCCCCeEEEeCCCCHHHHHHHHHH
Confidence                                                     334445578899999999999999999999999999999


Q ss_pred             HhhCcCCCcccCCceEEEecc---------------------------cCC---------------------CCCceecC
Q psy3652         235 ACCGTAGQRCTTTRRLFLHKK---------------------------KID---------------------RPGYFVEP  266 (394)
Q Consensus       235 ~~~~~~GQ~C~a~~rv~V~~~---------------------------~~~---------------------~~g~~~~P  266 (394)
                      ++|.|+||.|++++|||||++                           .+.                     ..|++++|
T Consensus       242 ~k~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~g~~l~~~~~~~~v~~~i~~a~~~~~~~~~~g~~~~~~~~~~G~~~~p  321 (862)
T PRK13805        242 SKTFDNGMICASEQAVIVDDEIYDEVKEEFASHGAYFLNKKELKKLEKFIFGKENGALNADIVGQSAYKIAEMAGFKVPE  321 (862)
T ss_pred             hhhccCCCccCCCceEEEehhhHHHHHHHHHHhCCeeCCHHHHHHHHHHHhhccCCCcCccccCCCHHHHHHHcCCCCCC
Confidence            999999999999999999999                           000                     02778899


Q ss_pred             eE------EEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhc----CCCCcEEEEEcCCHHHHHHhhcccccceeEE
Q psy3652         267 TI------VTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNE----VKQGLSSSIFTKDVTNLFKWLGPQGSDCGLI  336 (394)
Q Consensus       267 tv------l~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~----~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V  336 (394)
                      |+      +.+++++|++++ |+||||++|++|+|+||||+++|+    ++|||+++|||+|.+++++++  .++++|+|
T Consensus       322 ~~~~~i~~l~~v~~~~~~~~-E~fgPVl~v~~~~~~deAi~~~n~~~~~~~~gl~~~i~t~d~~~~~~~~--~~l~~g~v  398 (862)
T PRK13805        322 DTKILIAEVKGVGESEPLSH-EKLSPVLAMYKAKDFEDAVEKAEKLVEFGGLGHTAVIYTNDDELIKEFG--LRMKACRI  398 (862)
T ss_pred             CCeEEEEecCCCCCCCcchh-cccCcEEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECCCHHHHHHHH--hhCCccEE
Confidence            97      668899999887 799999999999999999999988    589999999999999999999  89999999


Q ss_pred             EEcCCCC---------CCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEEec
Q psy3652         337 NVNIPTN---------GAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTINH  381 (394)
Q Consensus       337 ~iN~~~~---------~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~~~  381 (394)
                      +||.++.         ...+++|||| |.||+|+++|+.++++|++.|+|..+.
T Consensus       399 ~vN~~~~~~~~~~~~~~~~~~~~fG~-G~~g~~~~~g~~g~~~~~~~k~v~~~~  451 (862)
T PRK13805        399 LVNTPSSQGGIGDLYNKLAPSLTLGC-GSWGGNSVSENVGAKHLLNIKTVAKRR  451 (862)
T ss_pred             EEeCCccccccccccCCcCccccccc-cCCCCCcCCCCCCHHHhheeeeeeecc
Confidence            9998752         3567899998 999999999999999999999998653

>cd07122 ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like

Probab=100.00  E-value=2.5e-54  Score=432.13  Aligned_cols=299  Identities=19%  Similarity=0.239  Sum_probs=245.4

Q ss_pred             HHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCChHHhHH-HHHHHHH-HHHHHHHhhhhcc
Q psy3652          74 YHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIG-EVQEFID-ICDYAVGLSRTYS  151 (394)
Q Consensus        74 v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~-ev~~~~~-~l~~~a~~~~~~~  151 (394)
                      |++|+++|++||+.|+.+|.++|.++|++++++|++++++|++++++|+|||+.+++. |+...++ .++++++.  ...
T Consensus         1 ~~~av~~A~~A~~~W~~~~~~eR~~~L~~~a~~l~~~~eela~~~~~E~Gk~~~ea~~~e~~~~~~~~~~~~~~~--~~~   78 (436)
T cd07122           1 VDELVERARKAQREFATFSQEQVDKIVEAVAWAAADAAEELAKMAVEETGMGVVEDKVIKNHFASEYVYNDIKDM--KTV   78 (436)
T ss_pred             ChHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHhcC--cce
Confidence            4789999999999999999999999999999999999999999999999999999975 7888887 78888753  222


Q ss_pred             CcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh------------------------------------
Q psy3652         152 GSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL------------------------------------  195 (394)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL------------------------------------  195 (394)
                      +....  ..+...+++++|+|||++|+|||||+.+.++++++||                                    
T Consensus        79 g~~~~--~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~~l~eaG~P~  156 (436)
T cd07122          79 GVIEE--DEEKGIVEIAEPVGVIAALIPSTNPTSTAIFKALIALKTRNAIIFSPHPRAKKCSIEAAKIMREAAVAAGAPE  156 (436)
T ss_pred             eeecc--CCCCCeEEEeecccEEEEEeCCCCchHHHHHHHHHHHHcCCcEEEECCcchhhHHHHHHHHHHHHHHHcCCCc
Confidence            22211  1234467889999999999999999999999999999                                    


Q ss_pred             ---------------------------------hHHHHHhhhhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCC
Q psy3652         196 ---------------------------------VGVAVQSRFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQ  242 (394)
Q Consensus       196 ---------------------------------~g~~i~~~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ  242 (394)
                                                       +++..+++.+|+++|+|||||+||++|||++.|++.+++++|.|+||
T Consensus       157 g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~v~~~a~~~~~~~~~elgG~~p~iV~~dADl~~A~~~i~~~~f~~~GQ  236 (436)
T cd07122         157 GLIQWIEEPSIELTQELMKHPDVDLILATGGPGMVKAAYSSGKPAIGVGPGNVPAYIDETADIKRAVKDIILSKTFDNGT  236 (436)
T ss_pred             hhEEEecCCChHHHHHHHcCCCcCEEEEcCCHHHHHHHHhcCCCEEEecCCCCeEEEcCCCCHHHHHHHHHHHhhccCCC
Confidence                                             34444556789999999999999999999999999999999999999


Q ss_pred             cccCCceEEEecc---------------------------cC-C-------------------CCCceecCe--E----E
Q psy3652         243 RCTTTRRLFLHKK---------------------------KI-D-------------------RPGYFVEPT--I----V  269 (394)
Q Consensus       243 ~C~a~~rv~V~~~---------------------------~~-~-------------------~~g~~~~Pt--v----l  269 (394)
                      .|++++|||||++                           .+ +                   ..|.++.|+  +    +
T Consensus       237 ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~~~~~~~v~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~ga~vl~~~~  316 (436)
T cd07122         237 ICASEQSVIVDDEIYDEVRAELKRRGAYFLNEEEKEKLEKALFDDGGTLNPDIVGKSAQKIAELAGIEVPEDTKVLVAEE  316 (436)
T ss_pred             CCCCCCEEEEechhHHHHHHHHHHhcceecCHHHHHHHHHHhhcCCCCcCccccCcCHHHHHHHcCCCCCCCCeEEEEec
Confidence            9999999999999                           00 0                   014455654  2    3


Q ss_pred             EcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcC----CCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCC
Q psy3652         270 TGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEV----KQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGA  345 (394)
Q Consensus       270 ~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~----~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~  345 (394)
                      .+++++|+++ +|.||||++|++|+|+||||+++|++    +|||++||||+|..++++++  .++++|+||||.++.+.
T Consensus       317 ~~v~~~~~~~-~E~FGPVl~v~~~~~~~eAi~~aN~~~~~~~~GLsa~V~T~d~~~a~~~~--~~l~aG~V~IN~~~~~~  393 (436)
T cd07122         317 TGVGPEEPLS-REKLSPVLAFYRAEDFEEALEKARELLEYGGAGHTAVIHSNDEEVIEEFA--LRMPVSRILVNTPSSLG  393 (436)
T ss_pred             CCCCCCCcch-hcccCCeEEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCHHHHHHHH--hhCCceEEEEeCCcccc
Confidence            5788999987 56799999999999999999999997    89999999999999999999  88999999999876444


Q ss_pred             CCCCCccCCCCC--------CCCCCchHHHHHhhhheeEEEE
Q psy3652         346 EIGGAFGGEKYT--------GGGRESGSDSWKQYCRRSTVTI  379 (394)
Q Consensus       346 ~~~~pfGG~~~S--------G~G~~~g~~~l~~f~~~k~v~~  379 (394)
                      ..+..+.|+..|        |.+...+..+.++|++.++|..
T Consensus       394 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  435 (436)
T cd07122         394 GIGDTYNGLAPSLTLGCGSWGGNSTSDNVGPKHLLNIKRVAY  435 (436)
T ss_pred             ccCccCCCCCceeeeeccccCCCcCCCCCChHHhheeEeecc
Confidence            333333332222        1222234467788888887753

Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway.

>TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase

Probab=100.00  E-value=8.9e-54  Score=451.55  Aligned_cols=310  Identities=19%  Similarity=0.180  Sum_probs=254.5

Q ss_pred             HHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCChHHhHH----------------HHHHH
Q psy3652          73 DYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIG----------------EVQEF  136 (394)
Q Consensus        73 ~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~----------------ev~~~  136 (394)
                      +++..+++|++||+.|+.+|.++|.++|++++++|++++++|+    .++||++.+++.                |+..+
T Consensus       287 ~~~~~~~~A~~A~~~w~~~~~~~R~~~L~~la~~l~~~~eei~----~e~gkdl~~a~~~~~~~~~~~el~~~~~ei~~~  362 (715)
T TIGR01092       287 GERDMAVAARESSRMLQALSSEQRKEILHDIADALEDNEDEIL----AENKKDVAAAQGAGYAASLVARLSMSPSKISSL  362 (715)
T ss_pred             HHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHH----HHHhhhHHHHHhcCcchhHHHHHhCCHHHHHHH
Confidence            4788899999999999999999999999999999999999996    577888776654                47788


Q ss_pred             HHHHHHHHHhhhhccCcccCCC--CCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh-------------------
Q psy3652         137 IDICDYAVGLSRTYSGSILPSE--RPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL-------------------  195 (394)
Q Consensus       137 ~~~l~~~a~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL-------------------  195 (394)
                      ++.++++++. ....+...+..  ..+...+..++|+|||++|+||| |+.+ ++++++||                   
T Consensus       363 ~~~l~~~a~~-~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN-P~~~-~~~~~~ALaaGN~vvlKpse~tp~t~~  439 (715)
T TIGR01092       363 AISLRQLAAM-EDPIGRVLKRTRIADNLILEKTSVPIGVLLIVFESR-PDAL-VQIASLAIRSGNGLLLKGGKEAARSNA  439 (715)
T ss_pred             HHHHHHHhcC-CCcccccccccccCCCceeEEEEeeceEEEEEeCCC-hHHH-HHHHHHHHHhCCEEEEcCcccchHHHH
Confidence            8889998874 33333333211  11333567899999999999999 9998 58999998                   


Q ss_pred             ------------------------------------------------hHHHHHh-hhhhhccccCCCCeEEEecCCCHH
Q psy3652         196 ------------------------------------------------VGVAVQS-RFGKLLLELGGNNAIIVNEDADLN  226 (394)
Q Consensus       196 ------------------------------------------------~g~~i~~-~~~~~~lElgGk~p~iV~~dADl~  226 (394)
                                                                      +|+.|++ ..+|+++|||||||+||++|||++
T Consensus       440 ~l~~l~~~alp~g~~~~~~~~v~~~~~~~~~l~~~~~vd~I~fTGS~~vG~~i~~~A~~pv~lElgGk~p~iV~~dADl~  519 (715)
T TIGR01092       440 ILHKVITEAIPIHVGKKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKKSTKIPVLGHADGICHVYVDKSASVD  519 (715)
T ss_pred             HHHHHHHHHcCCCCCCcEEEEeCChHHHHHHHhcCCCccEEEEcCCHHHHHHHHHhCCCCEEEEcCCcceEEECCCCCHH
Confidence                                                            7888875 447999999999999999999999


Q ss_pred             HHHHHHHHHhhCcCCCcccCCceEEEecccCC------------CCCcee-c----CeEEEcCCCCCcccccccccceEE
Q psy3652         227 LAQQCLVFACCGTAGQRCTTTRRLFLHKKKID------------RPGYFV-E----PTIVTGLPHNSRVVHRETFAPIVY  289 (394)
Q Consensus       227 ~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~~~~------------~~g~~~-~----Ptvl~~v~~~~~i~~eE~FGPvl~  289 (394)
                      .|++.++.++|.+ ||.|++++|||||++..+            ..|.-+ .    ...+...+++|++++||+||||++
T Consensus       520 ~A~~~i~~~~~~~-GQ~C~a~~rvlV~~~i~d~~~~~~~v~~~~~~Ga~l~Gg~~~~~~~~~~~~~~~i~~eE~FGPvl~  598 (715)
T TIGR01092       520 MAKRIVRDAKCDY-PAACNAMETLLVHKDLLRNGLLDDLIDMLRTEGVTIHGGPRFAAYLTFNISETKSFRTEYSSLACT  598 (715)
T ss_pred             HHHHHHHHHhCCC-CCccccCcEEEEehhhccchhHHHHHHHHHHCCCEEECCcchhheeccCCCCchhhhccccCceEE
Confidence            9987777777655 999999999999999211            011100 0    001112367899999999999999


Q ss_pred             EEeeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCC----CchH
Q psy3652         290 VFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGR----ESGS  365 (394)
Q Consensus       290 v~~~~~~~eAi~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~----~~g~  365 (394)
                      |++|+|+||||+++|+++|||++||||+|.+.+++++  .++++|.|+||.++. ..+..||||+|.||+|+    ++|+
T Consensus       599 v~~~~~~deAi~~~N~~~~gLa~~ift~d~~~a~~~~--~~i~sG~V~vN~~~~-~~~~~pfGG~k~SG~g~~~~~~~g~  675 (715)
T TIGR01092       599 VEIVDDVYDAIDHIHKHGSAHTDCIVTEDENVAEFFL--QHVDSAAVFHNASTR-FSDGFRFGLGAEVGISTSRIHARGP  675 (715)
T ss_pred             EEEECCHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHH--HhCCeeEEEEeCCCC-CCCCCCCcCccccccccCCCCCCCh
Confidence            9999999999999999999999999999999999999  889999999998743 45578999999999995    4799


Q ss_pred             HHHHhhhheeEEEEecCCcccccccccC
Q psy3652         366 DSWKQYCRRSTVTINHGKEITLAQGIKF  393 (394)
Q Consensus       366 ~~l~~f~~~k~v~~~~~~~~~~~~~~~~  393 (394)
                      +++++|++.|++.+..+.-.+-+||.-|
T Consensus       676 ~~l~~~~~~k~v~~g~g~~~~~~~~~~~  703 (715)
T TIGR01092       676 VGVEGLLTTRWLLRGKGQVVSGDHGLVY  703 (715)
T ss_pred             hHHHHhceEEEEEECCCeecCCCCCcce
Confidence            9999999999998887665555566544

This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region.

>cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily

Probab=100.00  E-value=3e-53  Score=419.29  Aligned_cols=296  Identities=37%  Similarity=0.610  Sum_probs=264.2

Q ss_pred             HHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCcccCCCC
Q psy3652          80 SSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSER  159 (394)
Q Consensus        80 aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~  159 (394)
                      +|++||+.|+.++.++|.++|+++++.|.++.++|+++++.|+|||..++..|+..+++.++++++..+.+.+...+...
T Consensus         2 ~a~~a~~~w~~~~~~~R~~~l~~l~~~l~~~~~~l~~~~~~e~Gk~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~   81 (367)
T cd06534           2 AARAAFKAWAALPPAERAAILRKIADLLEERREELAALETLETGKPIEEALGEVARAIDTFRYAAGLADKLGGPELPSPD   81 (367)
T ss_pred             hHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccC
Confidence            68999999999999999999999999999999999999999999999999999999999999999988776653333333


Q ss_pred             CCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh--------------------------------------------
Q psy3652         160 PGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL--------------------------------------------  195 (394)
Q Consensus       160 ~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL--------------------------------------------  195 (394)
                      .+....++++|+|||++|.|||||+...++.+++||                                            
T Consensus        82 ~~~~~~~~~~p~Gvv~~i~p~n~p~~~~~~~~~~aL~~GN~vilk~s~~~~~~~~~l~~~l~~ag~p~~~v~~~~~~~~~  161 (367)
T cd06534          82 PGGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALALAELLQEAGLPPGVVNVVPGGGDE  161 (367)
T ss_pred             CCceeEEEEEeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHhcCCCcCeEEEEEcCchh
Confidence            445567889999999999999999998999999998                                            


Q ss_pred             ---------------------hHHHHHh----hhhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceE
Q psy3652         196 ---------------------VGVAVQS----RFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRL  250 (394)
Q Consensus       196 ---------------------~g~~i~~----~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv  250 (394)
                                           +++.+.+    +++|+++|+||+|++||++|+|++.|++.+++++|.++||.|+++++|
T Consensus       162 ~~~~l~~~~~vd~v~~tGs~~~~~~v~~~~~~~~~~~~~e~~g~~~~iV~~~ad~~~aa~~i~~~~~~~~gq~C~s~~~v  241 (367)
T cd06534         162 VGAALLSHPRVDKISFTGSTAVGKAIMKAAAENLKPVTLELGGKSPVIVDEDADLDAAVEGAVFGAFFNAGQICTAASRL  241 (367)
T ss_pred             HHHHHhcCCCcCEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEE
Confidence                                 4555554    347899999999999999999999999999999999999999999999


Q ss_pred             EEecccCCCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHhhcccc
Q psy3652         251 FLHKKKIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQG  330 (394)
Q Consensus       251 ~V~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~  330 (394)
                      |||++..+.--..+. ||+.+++++++++++|+||||++|++|+|++|||+++|++++||++||||+|...+++++  .+
T Consensus       242 ~v~~~~~~~f~~~l~-tl~~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~--~~  318 (367)
T cd06534         242 LVHESIYDEFVEKLV-TVLVDVDPDMPIAQEEIFGPVLPVIRFKDEEEAIALANDTEYGLTAGVFTRDLNRALRVA--ER  318 (367)
T ss_pred             EEcHHHHHHHHHhhc-eeeeCCCCCCccccCCccCceEEEEecCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHHH--Hh
Confidence            999982211000001 888889999999999999999999999999999999999999999999999999999999  88


Q ss_pred             cceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEE
Q psy3652         331 SDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVT  378 (394)
Q Consensus       331 ~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~  378 (394)
                      +++|.|+||+++....+..||||.+.||+|+++|++++++|++.|++.
T Consensus       319 ~~~g~v~iN~~~~~~~~~~pfgg~~~sG~g~~~g~~~~~~~~~~k~i~  366 (367)
T cd06534         319 LRAGTVYINDSSIGVGPEAPFGGVKNSGIGREGGPYGLEEYTRTKTVV  366 (367)
T ss_pred             CCcceEEECCCCCCCCCCCCCCCcccCccCCCChHHHHHHhceEEEEe
Confidence            999999999876544678999999999999999999999999999874

The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri

>cd07077 ALDH-like NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family

Probab=100.00  E-value=4.1e-54  Score=429.04  Aligned_cols=287  Identities=16%  Similarity=0.098  Sum_probs=251.0

Q ss_pred             HHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCChHHhH-----------HHHHHHHHHHHHHHHhh
Q psy3652          79 ESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGI-----------GEVQEFIDICDYAVGLS  147 (394)
Q Consensus        79 ~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-----------~ev~~~~~~l~~~a~~~  147 (394)
                      ++|++||+.|+++|.++|.++|+++++.|++++++|++++++|+|||+.++.           .|+...++.++++++..
T Consensus         1 ~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~~~~~~~~~~~~~~~ev~~~~~~~~~~a~~~   80 (397)
T cd07077           1 ESAKNAQRTLAVNHDEQRDLIINAIANALYDTRQRLASEAVSERGAYIRSLIANWIAMMGCSESKLYKNIDTERGITASV   80 (397)
T ss_pred             ChHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHhCCcHHHHHHHHHHHHHHHHhc
Confidence            3689999999999999999999999999999999999999999999965432           48999999999998776


Q ss_pred             hhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh--------------------------------
Q psy3652         148 RTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL--------------------------------  195 (394)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL--------------------------------  195 (394)
                      .+..+...+.   ....+++++|+|||++|+|||||+. .++++++||                                
T Consensus        81 ~~~~~~~~~~---~~~~~~~~~P~Gvv~~i~p~N~P~~-~~~~~~~aL~aGN~vilKps~~~p~~~~~l~~~~~~~~~~g  156 (397)
T cd07077          81 GHIQDVLLPD---NGETYVRAFPIGVTMHILPSTNPLS-GITSALRGIATRNQCIFRPHPSAPFTNRALALLFQAADAAH  156 (397)
T ss_pred             CcccceEecC---CCceEEEEecceEEEEEeCCCCchH-HHHHHHHHHHcCCcEEEEcCcchhhHHHHHHHHHHHHhhcC
Confidence            5554443332   2346789999999999999999999 999999998                                


Q ss_pred             ------------------------------------hHHHHHhhh--hhhccccCCCCeEEEecCCCHHHHHHHHHHHhh
Q psy3652         196 ------------------------------------VGVAVQSRF--GKLLLELGGNNAIIVNEDADLNLAQQCLVFACC  237 (394)
Q Consensus       196 ------------------------------------~g~~i~~~~--~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~  237 (394)
                                                          +++.+++..  +|+++|+|||+|+||++|||++.|++.+++++|
T Consensus       157 ~p~~~v~~v~~~~~~~~~~l~~~~~vd~v~ftGs~~~~~~v~~~~~~~~~~~~~gg~~~~iv~~dad~~~a~~~~~~~~~  236 (397)
T cd07077         157 GPKILVLYVPHPSDELAEELLSHPKIDLIVATGGRDAVDAAVKHSPHIPVIGFGAGNSPVVVDETADEERASGSVHDSKF  236 (397)
T ss_pred             CCCceEEEecCCCHHHHHHHHcCCCCCEEEecCCHHHHHHHHHcCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHhhc
Confidence                                                667777766  799999999999999999999999999999999


Q ss_pred             CcCCCcccCCceEEEeccc------------------C--CCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHH
Q psy3652         238 GTAGQRCTTTRRLFLHKKK------------------I--DRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLD  297 (394)
Q Consensus       238 ~~~GQ~C~a~~rv~V~~~~------------------~--~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~  297 (394)
                      .| ||.|+++++||||++.                  +  +..++|+.||      ++|++++||+||||++|++|+|+|
T Consensus       237 ~~-GQ~C~a~~~v~V~~~i~d~~~~~l~~~~~~~G~~~~~g~~~~~~~pt------~~~~~~~~E~FgPvl~v~~~~~~~  309 (397)
T cd07077         237 FD-QNACASEQNLYVVDDVLDPLYEEFKLKLVVEGLKVPQETKPLSKETT------PSFDDEALESMTPLECQFRVLDVI  309 (397)
T ss_pred             cC-CccCCCCeEEEEehhhhHHHHHHHHHHHHhcCcCcCCCceeeEEecc------CCCChhhhhhhCceeEEEEEcchH
Confidence            99 9999999999999991                  1  1224555555      789999999999999999999996


Q ss_pred             ----HHHHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCC-CCCCCccCCC--CCCCCCCch-HHHHH
Q psy3652         298 ----EAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGA-EIGGAFGGEK--YTGGGRESG-SDSWK  369 (394)
Q Consensus       298 ----eAi~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~-~~~~pfGG~~--~SG~G~~~g-~~~l~  369 (394)
                          +|++++|+++|||+++|||+|.+++.+++  .++++|.|+||.+.... ...+||||++  .||+|+++| .++++
T Consensus       310 eai~~ai~~~n~~~~gl~~~Ift~d~~~~~~~~--~~l~~G~v~vN~~~~~~~~~~~~~gg~~~~~SG~g~~~g~~~~~~  387 (397)
T cd07077         310 SAVENAWMIIESGGGPHTRCVYTHKINKVDDFV--QYIDTASFYPNESSKKGRGAFAGKGVERIVTSGMNNIFGAGVGHD  387 (397)
T ss_pred             HHHHHHHHHHHhcCCCCceEEEeCCHHHHHHHH--HhCCEEEEEEeCCccCCCccccCCCcceEEEccccCCCCCCCChH
Confidence                66668899999999999999999999999  88999999999875433 2567999999  899999999 99999


Q ss_pred             hhhheeEEE
Q psy3652         370 QYCRRSTVT  378 (394)
Q Consensus       370 ~f~~~k~v~  378 (394)
                      +|++.|+++
T Consensus       388 ~~~~~k~v~  396 (397)
T cd07077         388 ALRPLKRLV  396 (397)
T ss_pred             HhcceeEee
Confidence            999999885

The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group.

>COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion]

Probab=100.00  E-value=8.6e-52  Score=401.33  Aligned_cols=324  Identities=30%  Similarity=0.460  Sum_probs=285.7

Q ss_pred             ceeCCeeccCCCeeeeecCCC-CCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHH
Q psy3652          39 VYDGTSWKANGEIIPSINPST-GETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQL  117 (394)
Q Consensus        39 ~~i~G~~~~~~~~~~v~nP~t-g~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~  117 (394)
                      -.++|+.+..++..+++||++ .+++++|..++.+|+++|++.|.+|++.|+.+|+.+|+.+|++++|+|+.+..+|..+
T Consensus       116 p~~~~~~~~~g~~~pV~nPad~~dvVG~V~ea~~~~v~~A~~~A~~a~p~W~atp~~eRAaiL~raAdlme~~m~~L~~L  195 (769)
T COG4230         116 PIVNGAPVAGGEPRPVINPADPDDIVGTVTEATEADVEQALEAAVAAAPIWSATPPAERAAILERAADLMEAQMPQLMGL  195 (769)
T ss_pred             cccCCCcCCCCCcccccCCCCHhHCeeeeeecCHHHHHHHHHHHHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            357777777888999999998 4578999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh--
Q psy3652         118 VSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL--  195 (394)
Q Consensus       118 ~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL--  195 (394)
                      +++|.||+...+..||..++|+|+||+...+.-.+.            ..++|+|+|.+|+|||||++++.+.++.||  
T Consensus       196 ~~REAGKtl~naIAEVREAVDFlrYYA~~ar~~~g~------------~~~~~~G~vVcISPWNFPLAIFtGqiaAAL~a  263 (769)
T COG4230         196 LVREAGKTLSNAIAEVREAVDFLRYYAGQARDTFGN------------LTHRPLGPVVCISPWNFPLAIFTGQIAAALAA  263 (769)
T ss_pred             HHHHhccchhhHHHHHHHHHHHHHHHHHHHhcccCc------------cccCCCCcEEEECCCCchHHHHHhHHHHHHHc
Confidence            999999999999999999999999999988652111            347999999999999999999999999999  


Q ss_pred             ---------------------------------------------------------------hHHHHHhhh-------h
Q psy3652         196 ---------------------------------------------------------------VGVAVQSRF-------G  205 (394)
Q Consensus       196 ---------------------------------------------------------------~g~~i~~~~-------~  205 (394)
                                                                                     +.+.|.+.+       .
T Consensus       264 GN~VlAKPAEqTpLIAa~aV~ll~eAGvP~~~lqLLpG~G~tvGa~L~~darv~GV~FTGSTevA~li~~~LA~r~g~~~  343 (769)
T COG4230         264 GNSVLAKPAEQTPLIAAQAVRLLHEAGVPPGVLQLLPGRGETVGAALTADARVAGVMFTGSTEVARLIQRQLAKRQGRPI  343 (769)
T ss_pred             CCccccCccccccHHHHHHHHHHHHcCCChhhHHhcCCCCcccchhhhcCcccceEEEeCcHHHHHHHHHHHhhcCCCCC
Confidence                                                                           445444422       2


Q ss_pred             hhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc------------------------------
Q psy3652         206 KLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK------------------------------  255 (394)
Q Consensus       206 ~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~------------------------------  255 (394)
                      |++.|.||.|++||+.+|--+.++..++.|+|..+||+|.+...++++++                              
T Consensus       344 pLIAETGGqNAMIVDSsAL~EQVv~Dvl~SAFdSAGQRCSALRvLclQ~DvAd~~l~mLKGAm~el~~G~p~~l~tDVGP  423 (769)
T COG4230         344 PLIAETGGQNAMIVDSSALAEQVVADVLASAFDSAGQRCSALRVLCLQEDVADRILTMLKGAMAELRVGNPDRLTTDVGP  423 (769)
T ss_pred             ceEeccCCcceEEeechhhHHHHHHHHHHHHhhcccchhhhhhhhhhhhhHHHHHHHHHHHHHHHhccCCccceeccccc
Confidence            68999999999999999999999999999999999999999999999999                              


Q ss_pred             ---------------------------cCC---CCCceecCeEEEcCCCCCcccccccccceEEEEeeC--CHHHHHHHH
Q psy3652         256 ---------------------------KID---RPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFD--SLDEAITWN  303 (394)
Q Consensus       256 ---------------------------~~~---~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~--~~~eAi~~~  303 (394)
                                                 ...   ..|.|+.||++. ++ +..-++.|+|||||.|++|+  ++++.|+-+
T Consensus       424 VIdaEAk~~i~~Hi~~mr~~gr~v~q~~~~~~~q~GtFv~Ptl~E-l~-~~~eL~rEVFGPVLHVvRy~~~~l~~vi~~I  501 (769)
T COG4230         424 VIDAEAKANIEKHIQTMRSKGRLVHQAAAPNSLQKGTFVAPTLIE-LE-NLDELQREVFGPVLHVVRYKRDELDEVIDQI  501 (769)
T ss_pred             cccHHHHHHHHHHHHHHHhcccchhhccCCCccCCceeeCceeEE-cC-CHHHHHHHhccceeEEEEecHHHHHHHHHHH
Confidence                                       011   369999999994 33 33456889999999999998  689999999


Q ss_pred             hcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCC-CCccCCCCCCCC-CCchHHHHHhhhheeEEE
Q psy3652         304 NEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIG-GAFGGEKYTGGG-RESGSDSWKQYCRRSTVT  378 (394)
Q Consensus       304 n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~-~pfGG~~~SG~G-~~~g~~~l~~f~~~k~v~  378 (394)
                      |.++|||+.+|+|+-.+.+.++.  .++.+|++|||....++-.+ .||||.+-||.| +-+|+..|..|...+...
T Consensus       502 NatGyGLT~GvHtRideti~~v~--~~~~aGNlYVNRN~vGAVVGVQPFGG~GLSGTGPKAGGp~YL~Rl~~~~p~~  576 (769)
T COG4230         502 NATGYGLTLGVHTRIDETIAHVT--ERAHAGNLYVNRNIVGAVVGVQPFGGEGLSGTGPKAGGPLYLLRLVSERPWS  576 (769)
T ss_pred             hccCcceeeeeecchHHHHHHHH--hhccccceEeeccceeeEEeeccCCCCCCCCCCCCCCChHHHHHHHhcCCcC
Confidence            99999999999999999999999  88999999999865444444 599999999999 567999999998766543

>TIGR02518 EutH_ACDH acetaldehyde dehydrogenase (acetylating)

Probab=100.00  E-value=8.8e-51  Score=412.66  Aligned_cols=305  Identities=17%  Similarity=0.132  Sum_probs=248.6

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCChHHhHH-HHHHHHHHHHHHHHh
Q psy3652          68 QGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIG-EVQEFIDICDYAVGL  146 (394)
Q Consensus        68 ~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~  146 (394)
                      ..+.+++++++++|++||+.|+.+|.++|.++|++++++|++++++|++++++|+|||..+++. +.......+.+++..
T Consensus         4 ~~~~~~v~~av~~A~~A~~~w~~~s~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~~~~~~~~~~~~~~~~~~   83 (488)
T TIGR02518         4 LYSIQQVRNLIRSAKVAQKKLANMTQEQIDKIVKAIVDAAYENAVKLAKMANEETGFGKWEDKVIKNVFAATIVYDSIKD   83 (488)
T ss_pred             ccCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHhh
Confidence            4678999999999999999999999999999999999999999999999999999999888763 233344555555543


Q ss_pred             hhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh-------------------------------
Q psy3652         147 SRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL-------------------------------  195 (394)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL-------------------------------  195 (394)
                      .+.. +.. .. ..+...++.++|+|||++|+|||||+.+..+++++||                               
T Consensus        84 ~~~~-G~~-~~-~~~~~~~~~~~PlGVV~~I~P~n~P~~~~~~k~~~AL~aGNaVIlKps~~a~~s~~~~~~~l~~~l~e  160 (488)
T TIGR02518        84 MKTI-GIL-SE-DKEKKVIEIAVPVGVVAGLIPSTNPTSTAIYKTLISIKARNAIVFSPHPNAKKCIIETVKLMRKAAEE  160 (488)
T ss_pred             Cccc-cee-cC-CCCcceEEEEecceEEEEEcccCChHHHHHHHHHHHHHcCCcEEEECCccchHHHHHHHHHHHHHHHH
Confidence            3222 321 11 2244567789999999999999999999999999999                               


Q ss_pred             --------------------------------------hHHHHHhhhhhhccccCCCCeEEEecCCCHHHHHHHHHHHhh
Q psy3652         196 --------------------------------------VGVAVQSRFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACC  237 (394)
Q Consensus       196 --------------------------------------~g~~i~~~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~  237 (394)
                                                            +++.+.+..+|+++|+|||||+||++|||++.|++.+++++|
T Consensus       161 aGlP~gvv~~v~g~~~e~~~~L~~~~~vd~V~fTGs~~v~~~a~~~~~pv~~e~gGn~p~iV~~dADld~Aa~~iv~sk~  240 (488)
T TIGR02518       161 AGAPEGAIGCITVPTIEGTNELMKNKDTSLILATGGEAMVKAAYSSGTPAIGVGPGNGPAYIERTANVKKAVRDIIDSKT  240 (488)
T ss_pred             cCcCcccEEEEcCCCHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHcCCCEEEEcCCCCeEEEeCCCCHHHHHHHHHHHHh
Confidence                                                  445555577899999999999999999999999999999999


Q ss_pred             CcCCCcccCCceEEEecc------------------------c---CCCCCceecCeE----------------------
Q psy3652         238 GTAGQRCTTTRRLFLHKK------------------------K---IDRPGYFVEPTI----------------------  268 (394)
Q Consensus       238 ~~~GQ~C~a~~rv~V~~~------------------------~---~~~~g~~~~Ptv----------------------  268 (394)
                      +|+||.|++.+|||||++                        .   .......+.|.+                      
T Consensus       241 ~~~Gq~C~a~~rllV~~~i~d~f~~~L~~~g~~~~~~~~~~~vg~~~~~~~~~~gp~i~~~~~~~i~~~i~~av~~gakl  320 (488)
T TIGR02518       241 FDNGTICASEQSIIVEECNKDAVVEELKKQGGYFLTAEEAEKLGKFILRPNGTMNPQIVGKSPQVIANLAGLTVPEDAKV  320 (488)
T ss_pred             cCCCCCCCCCCEEEEeHHHHHHHHHHHHHhhhhhcCHHHHHhhcccccCCCCCcCcccccchHHHHHHHhccccCCCCEE
Confidence            999999999999999999                        0   111223344543                      


Q ss_pred             EE----cCCCCCcccccccccceEEEEeeCCHHHHHHHHhc----CCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcC
Q psy3652         269 VT----GLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNE----VKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNI  340 (394)
Q Consensus       269 l~----~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~----~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~  340 (394)
                      +.    ++.+++++ ++|+||||++|++|+|+||||+++|+    ++|||+++|||+|.+++++|+  .++++|+|+||.
T Consensus       321 l~gg~~~v~~~~~~-~~E~fgPVl~v~~~~~~dEAI~~an~~i~~~~~Glta~I~T~d~~~a~~f~--~~i~ag~V~VN~  397 (488)
T TIGR02518       321 LIGEQNGVGNKNPY-SREKLTTILAFYTEENWHEACELSIELLQNEGAGHTLIIHSENKDIVREFA--LKKPVSRMLVNT  397 (488)
T ss_pred             EEeCCCCCCCCCcc-ccCccCceEEEEEeCCHHHHHHHHHHhhhcCCCCCeEEEEeCCHHHHHHHH--HhCCeeEEEEcC
Confidence            11    36778886 79999999999999999999999988    699999999999999999999  889999999996


Q ss_pred             CCC--------CCCCC--CCccCCCCCCCCCCchHHHHHhhhheeEEEEec
Q psy3652         341 PTN--------GAEIG--GAFGGEKYTGGGRESGSDSWKQYCRRSTVTINH  381 (394)
Q Consensus       341 ~~~--------~~~~~--~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~~~  381 (394)
                      ++.        .+.++  +.||+++.++..   .+.+++++++.|++....
T Consensus       398 ~~~~~~~Ga~t~~~~~~~~G~G~~~g~st~---~~v~~~~l~~~k~v~~~~  445 (488)
T TIGR02518       398 GGSLGGIGATTNLVPAFTLGCGAVGGSSTS---DNITPENLINIRRVAYGV  445 (488)
T ss_pred             CCcccccccccCCCccccccccccCCCcCC---CCCCHHHhheeeEEEecc
Confidence            431        12222  235665555544   388999999999998876

>TIGR00407 proA gamma-glutamyl phosphate reductase

Probab=100.00  E-value=1.6e-51  Score=407.80  Aligned_cols=282  Identities=22%  Similarity=0.200  Sum_probs=237.1

Q ss_pred             HHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHH------HHHHcCCCh------HHhHHHHHHHHHHHHHHHHhhh
Q psy3652          81 SRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQL------VSLEMGKIL------AEGIGEVQEFIDICDYAVGLSR  148 (394)
Q Consensus        81 A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~------~~~e~Gk~~------~~a~~ev~~~~~~l~~~a~~~~  148 (394)
                      |++||+.|+.+|.++|.++|++++++|++++++|+++      +++|+|||.      .+++.|+..+++.++++++.++
T Consensus         1 a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~a~~~E~Gk~~~~~~~l~~a~~ev~~~~~~~~~~a~~a~   80 (398)
T TIGR00407         1 AKQAANILAQLSTAEKNDALSKIADGLEAQAPAILAANAKDIAVAKENGLADALLDRLLLTEGRLKGIADGVKDVIELAD   80 (398)
T ss_pred             ChhHHHHHHhCCHHHHHHHHHHHHHHHHhChHHHHHHhHHHHHHHHHcCCCHHHHHHHcCCHHHHHHHHHHHHHHhcCCC
Confidence            5789999999999999999999999999999999999      999999994      3467899999999999998887


Q ss_pred             hccCcccCC--CCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh-------------------------------
Q psy3652         149 TYSGSILPS--ERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL-------------------------------  195 (394)
Q Consensus       149 ~~~~~~~~~--~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL-------------------------------  195 (394)
                      .+ ++..+.  ..++...++.++|+|||++|+||| | ...++++++||                               
T Consensus        81 ~~-g~~~~~~~~~~~~~~~~~~~PlGVV~~I~pw~-p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~~al~e  157 (398)
T TIGR00407        81 PV-GKVIDGRELDSGLTLERVRVPLGVLGVIYEAR-P-NVTVDIASLCLKTGNAVILRGGKEAVRSNKALVEVIQDALAQ  157 (398)
T ss_pred             CC-cccccceecCCCceEEEEEeCcEEEEEEeCCC-c-hHHHHHHHHHHHhCCeEEECCChhhHHHHHHHHHHHHHHHHH
Confidence            64 444332  123556788999999999999997 6 66788999998                               


Q ss_pred             ---------------------------------------hHHHHHhh-hhhhccccCCCCeEEEecCCCHHHHHHHHHHH
Q psy3652         196 ---------------------------------------VGVAVQSR-FGKLLLELGGNNAIIVNEDADLNLAQQCLVFA  235 (394)
Q Consensus       196 ---------------------------------------~g~~i~~~-~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~  235 (394)
                                                             +|+.+++. .+|+++|+|||||+||++|||++.|++.++++
T Consensus       158 aGlP~gvv~~v~g~~~~~~~~~l~~~~~v~~v~fTGs~~vg~~~~~~~~~~~~~e~gGk~p~iV~~dADl~~Aa~~iv~~  237 (398)
T TIGR00407       158 TGLPVGAVQLIETPSRELVSELLDLDEYIDLLIPRGGNGLVRLIKQTSTIPVLGHGDGICHIYLDESADLIKAIKVIVNA  237 (398)
T ss_pred             cCCChhHEEEecCCCHHHHHHHHhCCCCeeEEEecCCHHHHHHHHHhCCCCEEEecCCcceEEEeCCCCHHHHHHHHHhh
Confidence                                                   56666653 55899999999999999999999999999999


Q ss_pred             hhCcCCCcccCCceEEEeccc------------------CC---------CCCceecCeEEEcCCCCCcccccccccceE
Q psy3652         236 CCGTAGQRCTTTRRLFLHKKK------------------ID---------RPGYFVEPTIVTGLPHNSRVVHRETFAPIV  288 (394)
Q Consensus       236 ~~~~~GQ~C~a~~rv~V~~~~------------------~~---------~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl  288 (394)
                      +|.+ ||.|++++|+|||++.                  +.         ..|   .||++ +  .+|++++||+||||+
T Consensus       238 ~~~~-GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~~~~~~~~i~~~v~~g---~~tv~-~--~~~~i~~eE~FgPvl  310 (398)
T TIGR00407       238 KTQR-PSTCNAIETLLVNKAIAREFLPVLENQLLEKGVTIHADAYALKLLELG---PATEA-I--VCKTDFDKEFLSLDL  310 (398)
T ss_pred             hcCC-CCcccccceEEEeHHHHHHHHHHHHHHHHhcCCEEecCHHHHHHHhcc---Ccccc-c--cccccccchhhCcee
Confidence            9965 9999999999999990                  00         111   24654 3  337899999999999


Q ss_pred             EEEeeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCC----CCCCch
Q psy3652         289 YVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTG----GGRESG  364 (394)
Q Consensus       289 ~v~~~~~~~eAi~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG----~G~~~g  364 (394)
                      +|++|+|+||||+++|+++|||++||||+|.+++++++  .++++|.|+||.++. ..+..|||=-..-|    -...+|
T Consensus       311 ~v~~~~~~~eAi~~aN~~~~GL~a~I~t~d~~~a~~~a--~~i~~G~v~iN~~~~-~~~~~pfG~~~~~~~~~~~~~~rg  387 (398)
T TIGR00407       311 SVKIVESLEAAIQHINQYGTQHSDAILTENKANAEQFQ--NGVDSAAVYHNASTR-FTDGFRFGFGAEVGISTQKLHARG  387 (398)
T ss_pred             EEEEECCHHHHHHHHHHhCCCCceEEEeCCHHHHHHHH--HhCCeeEEEEeCCCC-cCCCcccccceeeEEecCCCcCCC
Confidence            99999999999999999999999999999999999999  889999999998753 44557888222222    344569


Q ss_pred             HHHHHhhhhee
Q psy3652         365 SDSWKQYCRRS  375 (394)
Q Consensus       365 ~~~l~~f~~~k  375 (394)
                      +.+++.|+..|
T Consensus       388 ~~~~~~~~~~~  398 (398)
T TIGR00407       388 PMGLEALTSYK  398 (398)
T ss_pred             CcCHHHhcCCC
Confidence            99999998765

The prosite motif begins at residue 332 of the seed alignment although not all of the members of the family exactly obey the motif.

>KOG2455|consensus

Probab=100.00  E-value=1.2e-49  Score=376.95  Aligned_cols=353  Identities=24%  Similarity=0.352  Sum_probs=301.8

Q ss_pred             hhhhhcCCCCCCCCCceeCCeeccCCCeeeeecCCC-CCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHH
Q psy3652          24 PFLKELGLSGSVNPGVYDGTSWKANGEIIPSINPST-GETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQ  102 (394)
Q Consensus        24 ~~~~~~~~~~~~~~~~~i~G~~~~~~~~~~v~nP~t-g~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~  102 (394)
                      ++++++... +....+.|||+.+.+.......+|.+ ..+++.+..++..+|++||++|.+|++.|..+|..+|.+|+++
T Consensus        48 ~A~~~~~~~-~~evP~vIg~~~v~t~~~q~q~~P~~hq~~lA~~~yA~~k~ie~AIkaAl~a~~~W~~~PiadR~aI~lk  126 (561)
T KOG2455|consen   48 KALKELQKR-PLEVPLVIGDKEVYTNDEQYQVCPHNHQHVLAKVYYATKKQIEKAIKAALSAQKTWELVPIADRLAIFLK  126 (561)
T ss_pred             HHHHHHhcC-ceeccEEECCeeeecCCcccccCCchhhhhhhheeeccHHHHHHHHHHHHhhcCccccCcHHHHHHHHHH
Confidence            678888877 78888999999998777788899987 5678999999999999999999999999999999999999999


Q ss_pred             HHHHHh-hCHHHHHHHHHHHcCCChHHhH-HHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccc-eeEEEEcc
Q psy3652         103 IGDALR-HKLVPLGQLVSLEMGKILAEGI-GEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPL-GVVGIISA  179 (394)
Q Consensus       103 ~a~~l~-~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~-GVV~~I~p  179 (394)
                      .|++++ +++-+|....+.-.||...+|. +...+.++++|+.+..+..+.........++......++|+ |.|++|+|
T Consensus       127 AAdlistkyr~~l~aatMlgqgKt~~qAeiDa~~eLidf~R~na~ya~eL~~~qpi~~~~~t~ns~~yRpleGFVaAisP  206 (561)
T KOG2455|consen  127 AADLISTKYRYDLLAATMLGQGKTAIQAEIDAAAELIDFFRFNAKYASELYAQQPISQTKGTWNSMEYRPLEGFVAAISP  206 (561)
T ss_pred             HHHHhcchHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHhHHHHHHhhhcCCccccCCCCcceeeccccceeEEecc
Confidence            999999 6788888888899999999985 44789999999999988887665554434444444577888 99999999


Q ss_pred             CCchhHhHHHHHHHHh----------------------------------------------------------------
Q psy3652         180 FNFPVAVYGWNAAIAL----------------------------------------------------------------  195 (394)
Q Consensus       180 ~N~P~~~~~~~~~~aL----------------------------------------------------------------  195 (394)
                      |||-........+|||                                                                
T Consensus       207 FnftAI~gnLa~aPaLMGN~VLwkPS~ta~lssYii~~il~EAGlP~GvinFvPad~~~f~dtita~~hfaglnftgS~~  286 (561)
T KOG2455|consen  207 FNFTAIGGNLAGAPALMGNVVLWKPSDTAALSSYIIYRILREAGLPPGVINFVPADGPLFGDTITASPHFAGLNFTGSVP  286 (561)
T ss_pred             cceeeeccccccChhhhcceeeecccchhHHHHHHHHHHHHHcCCCccceeeccCCCCeecceeccCcccceeeeecccH
Confidence            9997654444556666                                                                


Q ss_pred             --------hHHHHHh--hhhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc----------
Q psy3652         196 --------VGVAVQS--RFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK----------  255 (394)
Q Consensus       196 --------~g~~i~~--~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~----------  255 (394)
                              ++..+.+  .+.+++.|.||||.-+|+++||++.++...++++|..+||.|.+.+|+||+++          
T Consensus       287 ~fk~lwk~V~~n~~~Y~~fPrlvgEcgGkNFHfVH~SA~VesvV~~TvrsAfey~GQkcsA~SRmYvp~s~wp~i~e~l~  366 (561)
T KOG2455|consen  287 TFKHLWKKVGENVDNYRTFPRLVGECGGKNFHFVHASADVESVVSSTVRSAFEYQGQKCSACSRMYVPESLWPQIREELV  366 (561)
T ss_pred             HHHHHHHHHHhhhhhhhcchhhhccCCCcceEEeccccchHHHHHHHHHHHHhhcccccchhhhcccchhhcHHHHHHHH
Confidence                    2222221  34579999999999999999999999999999999999999999999999999          


Q ss_pred             ---------------------------------------------------cCCCCCceecCeEEEcCCCCCcccccccc
Q psy3652         256 ---------------------------------------------------KIDRPGYFVEPTIVTGLPHNSRVVHRETF  284 (394)
Q Consensus       256 ---------------------------------------------------~~~~~g~~~~Ptvl~~v~~~~~i~~eE~F  284 (394)
                                                                         ..+..|+|+.|||+..-+|.+++|.||+|
T Consensus       367 ~~~~q~~igd~~~d~~~f~gavIh~~sF~rl~k~le~ak~~~~leiL~GGk~DdS~G~FV~PTiv~~kdP~~pim~ee~f  446 (561)
T KOG2455|consen  367 EEHSQLKIGDPVIDFSTFIGAVIHDKSFARLKKVLEHAKKDPELEILAGGKCDDSTGYFVEPTIVLSKDPKDPIMTEEIF  446 (561)
T ss_pred             HHHhhcccCCccccccchhhhhccHHHHHHHHHHHHhhccCccceeeecCcccCCCCeeecceEEEccCCCcchhhhhcc
Confidence                                                               11457999999999999999999999999


Q ss_pred             cceEEEEeeCC--HHHHHHHH-hcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCC-CCCccCCCCCCCC
Q psy3652         285 APIVYVFPFDS--LDEAITWN-NEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEI-GGAFGGEKYTGGG  360 (394)
Q Consensus       285 GPvl~v~~~~~--~~eAi~~~-n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~-~~pfGG~~~SG~G  360 (394)
                      ||||+|+.|+|  ++|+++++ |.++|||+++||++|.+.+.+..+..+..+|+.+||+-.+++.. ..||||-+.||..
T Consensus       447 GPvLsVyvY~Dd~~~E~l~lv~~tt~YaLTGaiFaqd~~vv~~a~~~Lr~aAgNfYiNdKcTGsvvgqqpFGGaR~SGTN  526 (561)
T KOG2455|consen  447 GPVLSVYVYEDDKFDEVLKLVDNTTPYALTGAIFAQDREVVLHALDVLRMAAGNFYINDKCTGSVVGQQPFGGARLSGTN  526 (561)
T ss_pred             CceeEEEEeccccHHHHHHHHhcCCcceeccccccccHHHHHHHHHHHHhhhcceEEccccccceeeccccCcccccCCC
Confidence            99999999986  79999997 77899999999999999999988777889999999986555443 4699999999987


Q ss_pred             -CCchHHHHHhhhheeEE
Q psy3652         361 -RESGSDSWKQYCRRSTV  377 (394)
Q Consensus       361 -~~~g~~~l~~f~~~k~v  377 (394)
                       +.+|+..+-.|+.++.|
T Consensus       527 DKaGgp~~l~RwtSp~~i  544 (561)
T KOG2455|consen  527 DKAGGPHYLLRWTSPLSI  544 (561)
T ss_pred             CCCCCceEEEeecCcchh
Confidence             56677777777776655

>COG0014 ProA Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism]

Probab=99.94  E-value=3.3e-26  Score=217.92  Aligned_cols=303  Identities=22%  Similarity=0.247  Sum_probs=222.4

Q ss_pred             HHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCCh----HHhH--------HHHHHHHHH
Q psy3652          72 QDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKIL----AEGI--------GEVQEFIDI  139 (394)
Q Consensus        72 ~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~----~~a~--------~ev~~~~~~  139 (394)
                      .++.+..+.||+|+...+.++.++|.+.|.++|+.|+++.++|.+++++|.-...    .++.        ..++..++.
T Consensus         3 ~~~~~~~~~Ak~A~~~La~~st~~Kn~aL~a~A~~L~~~~~~IL~AN~~Dl~~are~gl~~~m~DRL~L~~~Ri~~ma~g   82 (417)
T COG0014           3 SELEELGKRAKAASRKLATLSTEEKNRALLAMADALEAARAEILAANAKDLAAARENGLSEAMLDRLALTPSRIEAMADG   82 (417)
T ss_pred             hHHHHHHHHHHHHHHHHhhcChhhHHHHHHHHHHHHHHhHHHHHHhhHHHHHHHHHcCCcHHHHHHHcCCHHHHHHHHHH
Confidence            4567778899999999999999999999999999999999999999988763211    1211        246677777


Q ss_pred             HHHHHHhhhhccCcccCCC-CCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh-----------------------
Q psy3652         140 CDYAVGLSRTYSGSILPSE-RPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL-----------------------  195 (394)
Q Consensus       140 l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL-----------------------  195 (394)
                      ++..+.+.+++..-..... ..|...+..+.|+||+++|  |..--..+.-..+.+|                       
T Consensus        83 l~~Va~L~DPvGev~~~~~~~nGL~i~~~rvPLGVigvI--YEsRPnVtvdaaaLclKsGNAvILRGGsea~~Sn~ai~~  160 (417)
T COG0014          83 LRQVAALPDPVGEVIDGWTLPNGLQIYRVRVPLGVIGVI--YESRPNVTVDAAALCLKSGNAVILRGGSEAIHSNAAIVE  160 (417)
T ss_pred             HHHHhcCCCchHhhhccccCCCCCEEEEEEccceEEEEE--EecCCccHHHHHHHHHhcCCEEEEeCcHHHhhhHHHHHH
Confidence            8888777776532211111 1256677889999999999  2221122333333333                       


Q ss_pred             -------------------------------------------hHHH----HHhhhh-hhccccCCCCeEEEecCCCHHH
Q psy3652         196 -------------------------------------------VGVA----VQSRFG-KLLLELGGNNAIIVNEDADLNL  227 (394)
Q Consensus       196 -------------------------------------------~g~~----i~~~~~-~~~lElgGk~p~iV~~dADl~~  227 (394)
                                                                 .|..    +.++.+ ||+-..-|+|+++|+++||+|+
T Consensus       161 ~i~~aL~~~~lP~~aVqli~~~~R~~v~~ll~l~~yiD~iIPRGg~~Li~~v~~~a~vPVi~~~~G~CHiyvd~~ADld~  240 (417)
T COG0014         161 VIQEALEKAGLPADAVQLIEDTDREEVLELLRLDGYIDLVIPRGGAGLIRRVVENATVPVIEHGVGNCHIYVDESADLDK  240 (417)
T ss_pred             HHHHHHHHcCCCHHHhhhccCCCHHHHHHHHhhcCceeEEEcCCcHHHHHHHHhCCcCCEEecCcceEEEEecccCCHHH
Confidence                                                       2322    233444 4444445999999999999999


Q ss_pred             HHHHHHHHhhCcCCCcccCCceEEEecc-----------cCCCCCceec--C---eEEEc--CCCCCcccccccccceEE
Q psy3652         228 AQQCLVFACCGTAGQRCTTTRRLFLHKK-----------KIDRPGYFVE--P---TIVTG--LPHNSRVVHRETFAPIVY  289 (394)
Q Consensus       228 aa~~i~~~~~~~~GQ~C~a~~rv~V~~~-----------~~~~~g~~~~--P---tvl~~--v~~~~~i~~eE~FGPvl~  289 (394)
                      |.+.++.++....+ .|++.+.++||+.           .+...|.-+.  +   .++.+  .+....-+..|...+++.
T Consensus       241 A~~ii~nAKtqrPs-~CNA~EtLLVh~~ia~~fLp~l~~~l~~~gvelr~d~~~~~~~~~~~~~A~e~Dw~tEyLd~ila  319 (417)
T COG0014         241 ALKIIVNAKTQRPS-VCNAAETLLVHRAIAKSFLPKLANALQEAGVELRGDAEALALLPDAVKPATEEDWDTEYLDLILA  319 (417)
T ss_pred             HHHHHHcccCCCCc-ccchHHHHHcCHHHHHHhHHHHHHHHHhcCeEEEcCHHHHHhccccCCCCchhhHHHHhhhheeE
Confidence            99999999999988 9999999999998           1122233222  1   12222  444556688899999999


Q ss_pred             EEeeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCC----CCCchH
Q psy3652         290 VFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGG----GRESGS  365 (394)
Q Consensus       290 v~~~~~~~eAi~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~----G~~~g~  365 (394)
                      |..++++||||+++|.++.+||-+|.|+|...+++|.  .++++..|++|.++.+. .+.-||=-..-|+    ..-+|+
T Consensus       320 vkvVd~ld~AI~HIn~y~S~HsdaIiTe~~~~a~~F~--~~VDSAaVyvNASTRFt-DG~~fG~GaEiGISTqKlHARGP  396 (417)
T COG0014         320 VKVVDSLDEAIAHINTYGSGHSDAIITEDYANAERFV--NEVDSAAVYVNASTRFT-DGGQFGLGAEIGISTQKLHARGP  396 (417)
T ss_pred             EEEeCCHHHHHHHHHHhCCCCCcceeeCCHHHHHHHH--hhcchheEEEecccccc-cCccccCceEEEeecCcccCCCC
Confidence            9999999999999999999999999999999999999  89999999999987443 3333332112222    234699


Q ss_pred             HHHHhhhheeEEEEe
Q psy3652         366 DSWKQYCRRSTVTIN  380 (394)
Q Consensus       366 ~~l~~f~~~k~v~~~  380 (394)
                      .|++++|..|++..-
T Consensus       397 mGLe~LTs~Kyiv~G  411 (417)
T COG0014         397 MGLEALTSYKYIVRG  411 (417)
T ss_pred             CChhhhcceeEEEeC
Confidence            999999999998654

>KOG4165|consensus

Probab=99.85  E-value=4.8e-20  Score=170.34  Aligned_cols=299  Identities=20%  Similarity=0.197  Sum_probs=212.1

Q ss_pred             HHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHc------CCChHHh-H-----HHHHHHHHHHH
Q psy3652          74 YHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEM------GKILAEG-I-----GEVQEFIDICD  141 (394)
Q Consensus        74 v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~------Gk~~~~a-~-----~ev~~~~~~l~  141 (394)
                      +++..+.||.|++...+++.++|.++|..++++|..+..+|.++...|+      |.....- +     +.+.....-++
T Consensus         2 ~e~~a~~aR~a~r~LqaLs~e~R~~il~~iad~L~~~~~~I~~aN~~Dla~Ake~GL~~sll~RL~l~~~K~~sl~~g~~   81 (433)
T KOG4165|consen    2 VEEMAENAREAGRILQALSNEDRADILHHIADLLVDNEKEILAANKKDLAEAKEAGLAESLLKRLDLSPGKISSLAAGLR   81 (433)
T ss_pred             HHHHHHHHHHHhhHHHhcChhhHHHHHHHHHHHHHhhHHHHHhcchhhHHHHHhcCccHHHHHHhcCChHHHHHHHHHHH
Confidence            3456678999999999999999999999999999999888887766554      4321111 1     33455555566


Q ss_pred             HHHHhhhhccCcccCC--CCCCceeEeeeccceeEEEEccCCc-hhHhHHHHHHHHh-----------------------
Q psy3652         142 YAVGLSRTYSGSILPS--ERPGHVLLENWNPLGVVGIISAFNF-PVAVYGWNAAIAL-----------------------  195 (394)
Q Consensus       142 ~~a~~~~~~~~~~~~~--~~~~~~~~~~~~P~GVV~~I~p~N~-P~~~~~~~~~~aL-----------------------  195 (394)
                      ..++.-+. .|++...  -.++...+....|+||.++|  |.. |=. +....+.|+                       
T Consensus        82 ~ia~~edp-vGRVl~~~~ladgL~L~qvt~PiGvLLVI--FESRPd~-l~qiasLAi~SgN~llLKGGkEa~~Sn~~L~~  157 (433)
T KOG4165|consen   82 QIAELEDP-VGRVLKKTRLADGLELEQVTVPIGVLLVI--FESRPDC-LPQIASLAIASGNGLLLKGGKEAAHSNAALHK  157 (433)
T ss_pred             HHHhcccc-hhhheeeeeccCCceEEEeeccceEEEEE--eccCchH-HHHHHHHHHhcCCeEeecCchhhhhhHHHHHH
Confidence            66653222 2332221  12456667788999999999  222 211 111111121                       


Q ss_pred             ---------------------------------------------hHHHHHhhh-hhhccccCCCCeEEEecCCCHHHHH
Q psy3652         196 ---------------------------------------------VGVAVQSRF-GKLLLELGGNNAIIVNEDADLNLAQ  229 (394)
Q Consensus       196 ---------------------------------------------~g~~i~~~~-~~~~lElgGk~p~iV~~dADl~~aa  229 (394)
                                                                   .-+.|.... .||.....|.|.++|++|||+++|-
T Consensus       158 ~v~~al~~~~~~~~aV~LV~sREev~dLl~ld~~IDLvIPRGSs~LVr~Ik~~tkIPVLGHA~GichvYvd~dad~~kA~  237 (433)
T KOG4165|consen  158 LVQEALGTHGGPGKAVQLVTSREEVSDLLKLDDYIDLVIPRGSSDLVRSIKDTTKIPVLGHAEGICHVYVDKDADLDKAK  237 (433)
T ss_pred             HHHHHhhhccCchhhhhheecHHHHHHHhhhhhheeEEecCCcHHHHHHHhhcccCcccccccceeEEEeccccCHHHHH
Confidence                                                         112222222 3777888899999999999999999


Q ss_pred             HHHHHHhhCcCCCcccCCceEEEecc------------cCCCCCce--ecCe---EEEcCCCCCcccccccccceEEEEe
Q psy3652         230 QCLVFACCGTAGQRCTTTRRLFLHKK------------KIDRPGYF--VEPT---IVTGLPHNSRVVHRETFAPIVYVFP  292 (394)
Q Consensus       230 ~~i~~~~~~~~GQ~C~a~~rv~V~~~------------~~~~~g~~--~~Pt---vl~~v~~~~~i~~eE~FGPvl~v~~  292 (394)
                      +.+..+++.+.. .|++.+.+++|++            .+...|.-  ..|-   ++.--+++..-++.|.-.-.+++-.
T Consensus       238 riv~DaK~dYPA-aCNAmETLLIh~dl~~~~~~~~l~~~l~~~gVtl~agpkl~~~l~~~p~e~~s~~~Ey~~l~~~iev  316 (433)
T KOG4165|consen  238 RIVRDAKCDYPA-ACNAMETLLIHKDLEQSPFFDDLINMLKEEGVTLHAGPKLAALLKFSPPEAKSFNTEYGSLECTIEV  316 (433)
T ss_pred             HHHhcccCCCch-hhhhHHHHhccHhhhhcchHHHHHHHHHhcCeEEecChhHHhhcCcCCchhhhhhhhhcchheeeee
Confidence            999999998776 9999999999997            11122321  1121   1111245667788999889999999


Q ss_pred             eCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCC--CC--CchHHHH
Q psy3652         293 FDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGG--GR--ESGSDSW  368 (394)
Q Consensus       293 ~~~~~eAi~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~--G~--~~g~~~l  368 (394)
                      +++.++||+.+|.++.+|+.+|.|+|.+.|++|.  ..+++..|++|.++.+ ..+.-||=-..-|+  +|  -+|+.|+
T Consensus       317 V~~v~~Ai~HI~~hgS~HTD~IvTe~~~~Ae~Fl--~~VDSa~vf~NASTRF-aDGfRfGlGaEVGIST~rIHARGPvGv  393 (433)
T KOG4165|consen  317 VDSVQSAIDHIHTHGSSHTDCIVTENEATAEHFL--KHVDSACVFHNASTRF-ADGFRFGLGAEVGISTSRIHARGPVGV  393 (433)
T ss_pred             cccHHHHHHHHHhcCCcccceEEecCHHHHHHHH--hccchhheeecccccc-cccccccccceeeeeccceeccCCccc
Confidence            9999999999999999999999999999999999  8999999999998644 44566653333443  23  3599999


Q ss_pred             HhhhheeEEEEe
Q psy3652         369 KQYCRRSTVTIN  380 (394)
Q Consensus       369 ~~f~~~k~v~~~  380 (394)
                      +-++.+|++..-
T Consensus       394 eGLlttkw~lRG  405 (433)
T KOG4165|consen  394 EGLLTTKWLLRG  405 (433)
T ss_pred             cceeeeeeEEec
Confidence            999999988653

>cd07080 ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC

Probab=99.81  E-value=3.8e-18  Score=171.36  Aligned_cols=232  Identities=17%  Similarity=0.142  Sum_probs=145.5

Q ss_pred             HHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHH---HHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhcc
Q psy3652          75 HRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQL---VSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYS  151 (394)
Q Consensus        75 ~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~---~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~  151 (394)
                      ++.++..+++++.|..-+...|.+.++++...+..+.+.+.+.   +..+..|+.-+..-  ..   .+    +..+.+.
T Consensus        27 ~~iv~~l~~~~~~~~~~~~~~r~~~l~~l~~~~~~~~~~~~~a~~~l~~~~~r~~l~~~l--~~---el----~~~~~Ld   97 (422)
T cd07080          27 EEIVDFLDRAGKRLLDPDYPLRQQAERLLPTVTGYSEEMLREGLKRLMALFRRENLERIL--ER---EL----GSPGILD   97 (422)
T ss_pred             HHHHHHHHHHHHHhcCCCchHHHHHHHhhhhccCCCHHHHHHHHHHHHHHcCHHHHHHHH--HH---hc----CCccccc
Confidence            3444444455555555555555555555555555555555554   44444333222210  00   00    0011111


Q ss_pred             CcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh------------------------------------
Q psy3652         152 GSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL------------------------------------  195 (394)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL------------------------------------  195 (394)
                      ++..    .+...+++++|+|||+.|+|||||+ +.++.++.||                                    
T Consensus        98 ~w~~----~~~~~~~~~~P~Gvv~~I~p~N~P~-l~~~s~~~aLlaGN~~ilKpS~~~p~~~~~l~~~l~~~~p~~~~~~  172 (422)
T cd07080          98 EWVP----PGRGGYIRAQPRGLVVHIIAGNVPL-LPVWSIVRGLLVKNVNLLKMSSSDPLTATALLRSLADVDPNHPLTD  172 (422)
T ss_pred             CCcc----CCCCCeeEEcCCceEEEEccCCccc-cHHHHHHHHHHhcCceEEECCCccchHHHHHHHHHHhcCCCCcccc
Confidence            1111    1234567899999999999999999 7888888887                                    


Q ss_pred             --------------------------------hHHHHHhhhh--hhccccCCCCe-EEEecCC----CHHHHHHHHHHHh
Q psy3652         196 --------------------------------VGVAVQSRFG--KLLLELGGNNA-IIVNEDA----DLNLAQQCLVFAC  236 (394)
Q Consensus       196 --------------------------------~g~~i~~~~~--~~~lElgGk~p-~iV~~dA----Dl~~aa~~i~~~~  236 (394)
                                                      +|+.+++...  +.++|+|||++ +|+.+++    |++.+++.+++++
T Consensus       173 ~~~vv~~~g~~~~~~~~l~~~~D~i~~~Gs~~~~~~i~~~a~~~~~~Le~Ggk~s~~vi~~~a~~~~dl~~aa~~~a~~~  252 (422)
T cd07080         173 SISVVYWPGGDAELEERILASADAVVAWGGEEAVKAIRSLLPPGCRLIDFGPKYSFAVIDREALESEKLAEVADALAEDI  252 (422)
T ss_pred             eEEEEEecCCchHHHHHHHHhCCEEEEeCCHHHHHHHHHhCCCCCeeeecCCceeEEEecHHhhccccHHHHHHHHHHHH
Confidence                                            5555554332  46899999955 5555568    9999999999999


Q ss_pred             hCcCCCcccCCceEEEeccc---C------------------C-----------------------CCCceecC---eEE
Q psy3652         237 CGTAGQRCTTTRRLFLHKKK---I------------------D-----------------------RPGYFVEP---TIV  269 (394)
Q Consensus       237 ~~~~GQ~C~a~~rv~V~~~~---~------------------~-----------------------~~g~~~~P---tvl  269 (394)
                      |.++||.|+|+++||||++.   .                  +                       ..+.....   +|+
T Consensus       253 ~~~~gQ~C~sp~~v~V~~~~~~~~~~f~~~l~~~l~~~~~~~p~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~v~  332 (422)
T cd07080         253 CRYDQQACSSPQVVFVEKDDDEELREFAEALAAALERLPRRYPALSLSAAESAKIARARLEAEFYELKGGVSRDLGWTVI  332 (422)
T ss_pred             HHHhhhhccCCeEEEEECCCCchHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEE
Confidence            99999999999999999871   0                  0                       00110011   333


Q ss_pred             EcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHhh
Q psy3652         270 TGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWL  326 (394)
Q Consensus       270 ~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~~gLsa~v~t~d~~~a~~~~  326 (394)
                      .+..  ..+.. ...+=.+.|.++++++|++..++.  |=-|.++|..+.+. .+++
T Consensus       333 ~~~~--~~~~~-~~~~r~v~v~~v~~l~~~l~~~~~--~lQTvg~~~~~~~~-~~~~  383 (422)
T cd07080         333 ISDE--IGLEA-SPLNRTVNVKPVASLDDVLRPVTP--YLQTVGLAPSPAEL-AELA  383 (422)
T ss_pred             EeCC--CCccC-CCCcCEEEEEEcchHHHHHHhhhh--hcceeEeecChhhH-HHHH
Confidence            2222  22222 456678899999999999999985  66799999988776 4444

Acyl-CoA reductase, LuxC, (EC=1.2.1.50) is the fatty acid reductase enzyme responsible for synthesis of the aldehyde substrate for the luminescent reaction catalyzed by luciferase. The fatty acid reductase, a luminescence-specific, multienzyme complex (LuxCDE), reduces myristic acid to generate the long chain fatty aldehyde required for the luciferase-catalyzed reaction resulting in the emission of blue-green light. Mutational studies of conserved cysteines of LuxC revealed that the cysteine which aligns with the catalytic cysteine conserved throughout the ALDH superfamily is the LuxC acylation site. This CD is composed of mainly bacterial sequences but also includes a few archaeal sequences similar to the Methanospirillum hungateiacyl acyl-CoA reductase RfbN.

>KOG2449|consensus

Probab=99.46  E-value=1.1e-13  Score=112.98  Aligned_cols=124  Identities=24%  Similarity=0.301  Sum_probs=97.5

Q ss_pred             cCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecccCCCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHH
Q psy3652         221 EDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKKKIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAI  300 (394)
Q Consensus       221 ~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi  300 (394)
                      +++|+..+...|-...-+   ..-.....++|..   ..+|.|+.||+|. |+|+|.++.||+||||+..+.-.++||||
T Consensus        30 p~tD~~a~~~ri~~liqS---~~~~~~r~~yl~~---ya~~~f~~~tiLs-vtP~ms~ykeeI~gpVlv~l~~~tldd~I  102 (157)
T KOG2449|consen   30 PQTDKYAPKVRIDKLIQS---EDPLDGRFIYLPG---YAEGNFVGPTILS-VTPNMSCYKEEIFGPVLVRLETETLDDAI  102 (157)
T ss_pred             CCccchhHHHHHHHHhcC---cCccCCceEEeec---cccCCcccceEEE-ecCCcceeHhhhhcceEEEEeecCCCcee
Confidence            567886666666554322   1333334444432   4679999999997 99999999999999999999999999999


Q ss_pred             HHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccC
Q psy3652         301 TWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGG  353 (394)
Q Consensus       301 ~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG  353 (394)
                      .++|+++||-...|||.+.+.++++.  ...++|.|.+|.+....-+...|.|
T Consensus       103 ~Iin~nPygn~t~i~Tsn~atark~~--~e~~a~qig~~~~ip~ilk~~sfsg  153 (157)
T KOG2449|consen  103 FIINNNPYGNGTAIFTSNGATARKFC--HEPDAGQIGANVPIPVILKMFSFSG  153 (157)
T ss_pred             EEEecCCCCceeEEEecCcHHhhhhh--cCCCccceeccccccccccceeccc
Confidence            99999999999999999999999999  8999999999986432222334444

>PF05893 LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR008670 This family consists of several bacterial Acyl-CoA reductase (LuxC) proteins

Probab=98.30  E-value=0.00028  Score=70.57  Aligned_cols=115  Identities=19%  Similarity=0.294  Sum_probs=74.3

Q ss_pred             ccccCCC-CeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc-------------------------------
Q psy3652         208 LLELGGN-NAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK-------------------------------  255 (394)
Q Consensus       208 ~lElgGk-~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~-------------------------------  255 (394)
                      .+.-|-| +-.+|..+++++.+++.+..-.+....|.|.|++.|||..+                               
T Consensus       194 ~i~fg~k~S~avi~~~~~~~~~a~~~a~Di~~~dQ~aCsSp~~ifv~~g~~~~~~~f~~~L~~~L~~~~~~~p~~~~s~~  273 (399)
T PF05893_consen  194 LIEFGPKYSFAVIDAEAELEEAARRLANDIFLFDQQACSSPQVIFVETGDGDSVEEFAERLAEALERAAERYPRGELSID  273 (399)
T ss_pred             EeeeCCceEEEEEcCchhHHHHHHHHHHHHHHhhCcccCCCeEEEEECCCcccHHHHHHHHHHHHHHHHHhCCCcCCCHH
Confidence            3444444 45666777789999999999999999999999999999943                               


Q ss_pred             ----------------cCCCC-Ccee----cCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcCCCCcEEEE
Q psy3652         256 ----------------KIDRP-GYFV----EPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSI  314 (394)
Q Consensus       256 ----------------~~~~~-g~~~----~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~~gLsa~v  314 (394)
                                      .++.. ..+-    .=||+....  + ......++-++.|.++++.+|++..+|....=-|.++
T Consensus       274 ~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~--~-~~~~~pl~r~v~v~~v~~~~e~~~~l~~~~~lQTvgi  350 (399)
T PF05893_consen  274 EAAAISSLRAEAELRYALDGEYRVWSSDDNSWTVIVSPE--P-PLLPSPLNRTVYVVPVDSLEELVPYLRPKRGLQTVGI  350 (399)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCcceeecCCCCEEEEECCC--c-ccccCCCCCEEEEEEcCCHHHHHHHhhhcCCCeeEEE
Confidence                            00111 1110    013442222  1 2223445668999999999999999988743246677


Q ss_pred             EcCCHHHHHHhh
Q psy3652         315 FTKDVTNLFKWL  326 (394)
Q Consensus       315 ~t~d~~~a~~~~  326 (394)
                      +..+. ....++
T Consensus       351 ~~~~~-~~~~~~  361 (399)
T PF05893_consen  351 YPWSE-RLEELA  361 (399)
T ss_pred             ecChh-hHHHHH
Confidence            65443 333333

The channelling of fatty acids into the fatty aldehyde substrate for the bacterial bioluminescence reaction is catalysed by a fatty acid reductase multienzyme complex, which channels fatty acids through the thioesterase (LuxD), synthetase (LuxE) and reductase (LuxC) components [].; GO: 0003995 acyl-CoA dehydrogenase activity, 0008218 bioluminescence, 0055114 oxidation-reduction process

>PF07368 DUF1487: Protein of unknown function (DUF1487); InterPro: IPR009961 This family consists of several uncharacterised proteins from Drosophila melanogaster

Probab=98.27  E-value=8.9e-06  Score=73.11  Aligned_cols=120  Identities=18%  Similarity=0.220  Sum_probs=91.0

Q ss_pred             CeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc---------------------------------------
Q psy3652         215 NAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK---------------------------------------  255 (394)
Q Consensus       215 ~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~---------------------------------------  255 (394)
                      +-+||++|.|++.|+..++.+.-.--  ...+..-|+|||+                                       
T Consensus         6 ~lMIvfe~GDlnsA~~~L~~sl~~Pf--~~~~VatVlVqEsireefi~rvr~~m~pl~~~va~Hpny~rsl~~i~~l~~~   83 (215)
T PF07368_consen    6 QLMIVFEDGDLNSAMHYLLESLHNPF--APGAVATVLVQESIREEFIERVRSRMKPLSPQVANHPNYLRSLKKIKCLNAK   83 (215)
T ss_pred             eEEEEEeCCCHHHHHHHHHHHHhCcc--cCCcEEEEEEeHHHHHHHHHHHHHhCccCChhhccCcHHHHHHHHHHhcCCe
Confidence            34899999999999999999865433  3457888999999                                       


Q ss_pred             --cCCCCC--ceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcC--CCCcEEEEEcCCHHHHHHhhccc
Q psy3652         256 --KIDRPG--YFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEV--KQGLSSSIFTKDVTNLFKWLGPQ  329 (394)
Q Consensus       256 --~~~~~g--~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~--~~gLsa~v~t~d~~~a~~~~~~~  329 (394)
                        ..+..+  ..-.|.++.|.+..  .+.. --.+|+++..|++..||++++++.  .|+ +.+||++-.+.+-+++  .
T Consensus        84 ~I~~~~~~~~~~aSPilV~d~~h~--~fg~-~PTgViTlhtFRt~~Ea~~l~~kE~l~f~-SVsiW~ekla~~Yel~--~  157 (215)
T PF07368_consen   84 TIVADFENVPPPASPILVCDFTHS--YFGD-GPTGVITLHTFRTPKEAIELCAKETLPFD-SVSIWNEKLASAYELA--A  157 (215)
T ss_pred             EEEecccCCCCCCCCEEEcCCCHH--HcCC-CCCeEEEEEccCCHHHHHHHHhcCCCCcc-eEEEeCcHHHHHHHHH--H
Confidence              001111  12246777665543  1122 223799999999999999999875  455 9999999999999999  8


Q ss_pred             ccceeEEEEcCCC
Q psy3652         330 GSDCGLINVNIPT  342 (394)
Q Consensus       330 ~~~~g~V~iN~~~  342 (394)
                      ++++..++||+..
T Consensus       158 ~l~~~~f~iNC~~  170 (215)
T PF07368_consen  158 RLPCDTFYINCFN  170 (215)
T ss_pred             hCCCCEEEEEecc
Confidence            8999999999854

The function of this family is unknown.

>PF00815 Histidinol_dh: Histidinol dehydrogenase; InterPro: IPR012131 Histidinol dehydrogenase (HDH) catalyzes the terminal step in the biosynthesis of histidine in bacteria, fungi, and plants, the four-electron oxidation of L-histidinol to histidine

Probab=94.64  E-value=2.1  Score=42.85  Aligned_cols=82  Identities=24%  Similarity=0.184  Sum_probs=46.0

Q ss_pred             EEEEeeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCC--------CCCCCCCccCCCCCCC
Q psy3652         288 VYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTN--------GAEIGGAFGGEKYTGG  359 (394)
Q Consensus       288 l~v~~~~~~~eAi~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~--------~~~~~~pfGG~~~SG~  359 (394)
                      -.++-++|++||++++|..-- =-..|.++|+.....-    --.+|.|++...+.        +.+.-+|-     +|.
T Consensus       289 g~ii~~~~l~ea~~~~N~~AP-EHLel~~~~~~~~~~~----i~~AGaiFlG~~tp~a~GDY~aGpNHvLPT-----~G~  358 (412)
T PF00815_consen  289 GAIIVVDSLEEAIELANEYAP-EHLELQVEDPEELLEK----IRNAGAIFLGEYTPEALGDYAAGPNHVLPT-----GGT  358 (412)
T ss_dssp             -EEEE-SSHHHHHHHHHHH---SEEEEESTTHHHHGGG------S-SEEEESTT--HHHHHHTSSS-----------TTG
T ss_pred             CeEEEECCHHHHHHHHHHhhH-HHHHHHHcCHHHHHHH----hhccChhhcCCCCCHHHhhhccCCCccCCC-----Ccc
Confidence            357788999999999998632 2456788887654332    24789999987541        11222344     346


Q ss_pred             CCCchHHHHHhhhheeEEEE
Q psy3652         360 GRESGSDSWKQYCRRSTVTI  379 (394)
Q Consensus       360 G~~~g~~~l~~f~~~k~v~~  379 (394)
                      .|+.|..+...|+++.++..
T Consensus       359 AR~~sgLsv~~FlK~~s~~~  378 (412)
T PF00815_consen  359 ARFSSGLSVDDFLKRISVQR  378 (412)
T ss_dssp             GGT---S-GGGGEEEEEEEE
T ss_pred             ccccCCCcHHHccceeeEEE
Confidence            67778888888987766543

In 4-electron dehydrogenases, a single active site catalyses 2 separate oxidation steps: oxidation of the substrate alcohol to an intermediate aldehyde; and oxidation of the aldehyde to the product acid, in this case His []. The reaction proceeds via a tightly- or covalently-bound inter-mediate, and requires the presence of 2 NAD molecules []. By contrast with most dehydrogenases, the substrate is bound before the NAD coenzyme []. A Cys residue has been implicated in the catalytic mechanism of the second oxidative step []. In bacteria HDH is a single chain polypeptide; in fungi it is the C-terminal domain of a multifunctional enzyme which catalyzes three different steps of histidine biosynthesis; and in plants it is expressed as nuclear encoded protein precursor which is exported to the chloroplast [].; GO: 0004399 histidinol dehydrogenase activity, 0008270 zinc ion binding, 0051287 NAD binding, 0000105 histidine biosynthetic process, 0055114 oxidation-reduction process; PDB: 1KAE_B 1K75_A 1KAH_A 1KAR_B.

>PRK00877 hisD bifunctional histidinal dehydrogenase/ histidinol dehydrogenase; Reviewed

Probab=91.01  E-value=9.7  Score=38.32  Aligned_cols=80  Identities=26%  Similarity=0.293  Sum_probs=53.0

Q ss_pred             EEEeeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccC--------CCCCCCC
Q psy3652         289 YVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGG--------EKYTGGG  360 (394)
Q Consensus       289 ~v~~~~~~~eAi~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG--------~~~SG~G  360 (394)
                      .|+-++|+|||++++|..--= -.-|.++|+.....-.    -.+|.|++..++.     .++|.        ...+|..
T Consensus       304 ~iivv~~leeai~~~N~~APE-HLel~~~~p~~~l~~I----~nAGaiFlG~~tp-----~a~GDY~aGpNHvLPT~G~A  373 (425)
T PRK00877        304 AIILVDDLEEAIELSNAYAPE-HLEIQTEDPRALLDRI----RNAGAIFLGPYTP-----ESLGDYAAGPNHVLPTSGTA  373 (425)
T ss_pred             EEEEECCHHHHHHHHHhhChH-heeehhCCHHHHHhhc----CccceeccCCCCc-----hhhhhcccCCCcccCCCcce
Confidence            357789999999999986322 2347778876544322    4789999975432     12221        1244567


Q ss_pred             CCchHHHHHhhhheeEEE
Q psy3652         361 RESGSDSWKQYCRRSTVT  378 (394)
Q Consensus       361 ~~~g~~~l~~f~~~k~v~  378 (394)
                      |+.+..+...|+++.++.
T Consensus       374 R~~sgLsV~~F~K~~s~~  391 (425)
T PRK00877        374 RFSSGLSVYDFLKRSSVI  391 (425)
T ss_pred             eecCCccHHHhccceeEE
Confidence            888888899998776654

>PRK12447 histidinol dehydrogenase; Reviewed

Probab=89.73  E-value=24  Score=35.53  Aligned_cols=80  Identities=19%  Similarity=0.250  Sum_probs=52.6

Q ss_pred             EEEeeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccC--------CCCCCCC
Q psy3652         289 YVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGG--------EKYTGGG  360 (394)
Q Consensus       289 ~v~~~~~~~eAi~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG--------~~~SG~G  360 (394)
                      .|+-++|++||++++|..--= -.-|.++|+.....-.    -.+|.|++...+.     .++|.        ...+|..
T Consensus       299 ~ii~v~~l~ea~~~~N~~APE-HLel~~~~~~~~l~~i----~nAGaiFlG~~sp-----~a~GDY~aGpNHvLPT~G~A  368 (426)
T PRK12447        299 EVILCDDLEEMVAEADRYASE-HVQVMTEDPDWFLENM----TNYGALFLGERTN-----VAYGDKVIGTNHVLPTSGAA  368 (426)
T ss_pred             EEEEECCHHHHHHHHHhhChH-heeehhCCHHHHHhhc----CccceeccCCCCc-----hhhhhcccCCCcccCCCcce
Confidence            357789999999999986322 2347778876544322    4789999975432     12221        1234567


Q ss_pred             CCchHHHHHhhhheeEEE
Q psy3652         361 RESGSDSWKQYCRRSTVT  378 (394)
Q Consensus       361 ~~~g~~~l~~f~~~k~v~  378 (394)
                      |+.+..+...|++..++.
T Consensus       369 r~~sgLsv~~FlK~~s~~  386 (426)
T PRK12447        369 RYTGGLWVGKFLKTVTYQ  386 (426)
T ss_pred             eecCCCcHHHhccceeEE
Confidence            788888899998776554

>PLN02926 histidinol dehydrogenase

Probab=89.54  E-value=25  Score=35.46  Aligned_cols=80  Identities=19%  Similarity=0.231  Sum_probs=53.8

Q ss_pred             EEEEeeCCHHHHHHHHhcCC-CCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCC--------CCCC
Q psy3652         288 VYVFPFDSLDEAITWNNEVK-QGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGE--------KYTG  358 (394)
Q Consensus       288 l~v~~~~~~~eAi~~~n~~~-~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~--------~~SG  358 (394)
                      -.|+-++|++||++++|..- -.|  -|.++|+.....-.    -.+|.|++..++.     .++|.+        ..+|
T Consensus       306 g~iivv~~l~ea~~~~N~~APEHL--ei~~~~~~~~l~~i----~nAGaiFlG~~sp-----~a~GDY~aGpNHvLPT~G  374 (431)
T PLN02926        306 SFIVVARDMAEAISFSNLYAPEHL--IVNVEDAESWLDKI----DNAGSVFLGRWTP-----ESVGDYASGTNHVLPTYG  374 (431)
T ss_pred             CEEEEECCHHHHHHHHHhhChHhh--eehhcCHHHHHhhc----CccceeccCCCCc-----hhhhccccCcCcccCCCc
Confidence            45688999999999999863 333  47788876654322    4789999965432     122211        2345


Q ss_pred             CCCCchHHHHHhhhheeEEE
Q psy3652         359 GGRESGSDSWKQYCRRSTVT  378 (394)
Q Consensus       359 ~G~~~g~~~l~~f~~~k~v~  378 (394)
                      .+|+.|..+...|+++.++.
T Consensus       375 ~AR~~sgLsv~~FlK~~s~~  394 (431)
T PLN02926        375 YARMYGGVSLDSFLKYMTVQ  394 (431)
T ss_pred             ceeecCCCcHHHhcceeeEE
Confidence            67788888899998866553

>cd06572 Histidinol_dh Histidinol dehydrogenase, HisD, E

Probab=89.23  E-value=22  Score=35.52  Aligned_cols=80  Identities=24%  Similarity=0.197  Sum_probs=52.3

Q ss_pred             EEEeeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCC--------CCCCCCccCCCCCCCC
Q psy3652         289 YVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNG--------AEIGGAFGGEKYTGGG  360 (394)
Q Consensus       289 ~v~~~~~~~eAi~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~--------~~~~~pfGG~~~SG~G  360 (394)
                      .++-++|++|+++++|..-- --.-|.++|......-.    -.+|.|++..++.-        .+.-+|.     +|..
T Consensus       277 ~ii~~~~~~eai~~~N~~AP-EHLel~~~~~~~~l~~i----~nAGsiFlG~~tp~a~GDY~aGpNHvLPT-----~G~A  346 (390)
T cd06572         277 AIILVDDLEEAIELANEYAP-EHLELQTEDPEELLEKI----RNAGSIFLGPYTPEALGDYAAGPNHVLPT-----GGTA  346 (390)
T ss_pred             EEEEECCHHHHHHHHHhhch-hhheeHhcCHHHHHhhC----ccceEEeecCCCchhhhccccCCCCccCC-----Ccce
Confidence            56778999999999998632 23456778876644322    47899999765321        1112344     4566


Q ss_pred             CCchHHHHHhhhheeEEE
Q psy3652         361 RESGSDSWKQYCRRSTVT  378 (394)
Q Consensus       361 ~~~g~~~l~~f~~~k~v~  378 (394)
                      |+.+..+...|+++.++.
T Consensus       347 r~~sgL~v~~F~K~~s~~  364 (390)
T cd06572         347 RFYSGLSVDDFLKRITVQ  364 (390)
T ss_pred             eecCCCCHHHheecceeE
Confidence            777777888888776553

C 1.1.1.23. Histidinol dehydrogenase catalyzes the last two steps in the L-histidine biosynthesis pathway, which is conserved in bacteria, archaea, fungi, and plants. These last two steps are (i) the NAD-dependent oxidation of L-histidinol to L-histidinaldehyde, and (ii) the NAD-dependent oxidation of L-histidinaldehyde to L-histidine. In most fungi and in the unicellular choanoflagellate Monosiga bevicollis, the HisD domain is fused with units that catalyze the second and third biosynthesis steps in this same pathway.

>TIGR00069 hisD histidinol dehydrogenase

Probab=88.53  E-value=28  Score=34.70  Aligned_cols=80  Identities=26%  Similarity=0.253  Sum_probs=53.1

Q ss_pred             EEEeeCCHHHHHHHHhcCC-CCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCC--------CCCCC
Q psy3652         289 YVFPFDSLDEAITWNNEVK-QGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGE--------KYTGG  359 (394)
Q Consensus       289 ~v~~~~~~~eAi~~~n~~~-~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~--------~~SG~  359 (394)
                      .++-++|++||++++|..- -.|  -|.++|+.....-.    -.+|.|++..++.     .++|.+        ..+|.
T Consensus       273 ~ii~v~~l~ea~~~~N~~APEHL--el~~~~p~~~l~~I----~nAGaiFlG~~tp-----~a~GDY~aG~NHvLPT~G~  341 (393)
T TIGR00069       273 AIILVDDLEEAIEISNDYAPEHL--ELQTKNPEELLPKI----RNAGSIFLGPYTP-----EAAGDYAAGPNHVLPTGGT  341 (393)
T ss_pred             EEEEECCHHHHHHHHHhhChHhh--eehhCCHHHHHhhc----CccceeccCCCCc-----hhhhhccCCCCcccCCCcc
Confidence            3577899999999999863 234  47778876544322    4789999976542     122211        23456


Q ss_pred             CCCchHHHHHhhhheeEEEE
Q psy3652         360 GRESGSDSWKQYCRRSTVTI  379 (394)
Q Consensus       360 G~~~g~~~l~~f~~~k~v~~  379 (394)
                      .|+.+..+...|+++.++..
T Consensus       342 Ar~~sgL~v~~F~K~~s~~~  361 (393)
T TIGR00069       342 ARFYSGLSVLDFLKRITVQR  361 (393)
T ss_pred             eeecCCccHHHhccceeEEE
Confidence            77778888999987766543

This model describes a polypeptide sequence catalyzing the final step in histidine biosynthesis, found sometimes as an independent protein and sometimes as a part of a multifunctional protein.

>COG0141 HisD Histidinol dehydrogenase [Amino acid transport and metabolism]

Probab=87.15  E-value=30  Score=34.65  Aligned_cols=79  Identities=25%  Similarity=0.279  Sum_probs=51.6

Q ss_pred             EEEeeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCC--------CCCCCC
Q psy3652         289 YVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGE--------KYTGGG  360 (394)
Q Consensus       289 ~v~~~~~~~eAi~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~--------~~SG~G  360 (394)
                      .|+-++|++|+++++|..-- --.-|.++|+.....-.    -.+|.|++...+.-     |+|.+        ..+|+-
T Consensus       300 ~iilv~~l~ea~~~~N~~AP-EHLei~~~~p~~~l~~I----~nAGsIFlG~~sPe-----~~GDY~aG~NHVLPT~g~A  369 (425)
T COG0141         300 AIILVDDLDEAVEISNEYAP-EHLELQTENPRELLGKI----RNAGSIFLGHYSPE-----SLGDYAAGPNHVLPTSGTA  369 (425)
T ss_pred             eEEEECCHHHHHHHHHhhCh-HhhhhhhcCHHHHHHHh----cccceeeecCCCCc-----cccccccCCCccCCCCccc
Confidence            46778999999999998632 23457778876644332    37899999975421     22221        234556


Q ss_pred             CCchHHHHHhhhheeEE
Q psy3652         361 RESGSDSWKQYCRRSTV  377 (394)
Q Consensus       361 ~~~g~~~l~~f~~~k~v  377 (394)
                      |+.+..+...|++..++
T Consensus       370 R~~s~L~v~dF~K~~tv  386 (425)
T COG0141         370 RFSSGLSVYDFLKRSTV  386 (425)
T ss_pred             hhcCCccHHHhhhHHHH
Confidence            66777778888766543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	394
2jg7_A	510	Crystal Structure Of Seabream Antiquitin And Elucid		8e-72
2j6l_A	500	Structure Of Aminoadipate-Semialdehyde Dehydrogenas		3e-62
1bi9_A	499	Retinal Dehydrogenase Type Two With Nad Bound Lengt		5e-15
1nzw_A	500	Cys302ser Mutant Of Human Mitochondrial Aldehyde De		2e-13
2wme_A	490	Crystallographic Structure Of Betaine Aldehyde Dehy		2e-13
2wme_A	490	Crystallographic Structure Of Betaine Aldehyde Dehy		3e-08
2wox_A	489	Betaine Aldehyde Dehydrogenase From Pseudomonas Aer		2e-13
2wox_A	489	Betaine Aldehyde Dehydrogenase From Pseudomonas Aer		3e-08
2xdr_A	489	Crystallographic Structure Of Betaine Aldehyde Dehy		2e-13
2xdr_A	489	Crystallographic Structure Of Betaine Aldehyde Dehy		3e-08
2wme_C	490	Crystallographic Structure Of Betaine Aldehyde Dehy		2e-13
2wme_C	490	Crystallographic Structure Of Betaine Aldehyde Dehy		3e-08
3n80_A	500	Human Mitochondrial Aldehyde Dehydrogenase, Apo For		3e-13
3zqa_A	490	Crystallographic Structure Of Betaine Aldehyde Dehy		3e-13
3zqa_A	490	Crystallographic Structure Of Betaine Aldehyde Dehy		3e-08
3n81_A	500	T244a Mutant Of Human Mitochondrial Aldehyde Dehydr		4e-13
1o05_A	500	Apo Form Of Human Mitochondrial Aldehyde Dehydrogen		4e-13
4dal_A	498	Crystal Structure Of Putative Aldehyde Dehydrogenas		6e-13
2onn_A	500	Arg475gln Mutant Of Human Mitochondrial Aldehyde De		1e-12
3inl_A	500	Human Mitochondrial Aldehyde Dehydrogenase Asian Va		7e-12
1zum_A	500	Human Mitochondrial Aldehyde Dehydrogenase Asian Va		1e-11
3efv_A	462	Crystal Structure Of A Putative Succinate-Semialdeh		5e-11
3efv_A	462	Crystal Structure Of A Putative Succinate-Semialdeh		7e-06
1wnb_A	495	Escherichia Coli Ydcw Gene Product Is A Medium-Chai		5e-11
2o2p_A	517	Crystal Structure Of The C-Terminal Domain Of Rat 1		6e-11
1ag8_A	499	Aldehyde Dehydrogenase From Bovine Mitochondria Len		6e-11
4dng_A	485	Crystal Structure Of Putative Aldehyde Dehydrogenas		7e-11
3rhm_A	517	Crystal Structure Of The E673q Mutant Of C-Terminal		7e-11
3rhj_A	517	Crystal Structure Of The E673a Mutant Of The C-Term		7e-11
3rhr_A	517	Crystal Structure Of The C707a Mutant Of The C-Term		8e-11
3rhl_A	517	Crystal Structure Of The E673aC707A DOUBLE MUTANT O		8e-11
4gnz_A	517	Crystal Structure Of The C707s Mutant Of C-terminal		8e-11
1bxs_A	501	Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad		1e-10
3rjl_A	538	Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy		1e-10
2opx_A	479	Crystal Structure Of Lactaldehyde Dehydrogenase Fro		2e-10
1o9j_A	501	The X-Ray Crystal Structure Of Eta-Crystallin Lengt		2e-10
1uzb_A	516	1-pyrroline-5-carboxylate Dehydrogenase Length = 51		3e-10
1a4s_A	503	Betaine Aldehyde Dehydrogenase From Cod Liver Lengt		3e-10
2hg2_A	479	Structure Of Lactaldehyde Dehydrogenase Length = 47		3e-10
2hg2_A	479	Structure Of Lactaldehyde Dehydrogenase Length = 47		2e-09
3r31_A	517	Crystal Structure Of Betaine Aldehyde Dehydrogenase		4e-10
2imp_A	479	Crystal Structure Of Lactaldehyde Dehydrogenase Fro		4e-10
2imp_A	479	Crystal Structure Of Lactaldehyde Dehydrogenase Fro		2e-09
3ed6_A	520	1.7 Angstrom Resolution Crystal Structure Of Betain		4e-10
3ed6_A	520	1.7 Angstrom Resolution Crystal Structure Of Betain		4e-09
3k2w_A	497	Crystal Structure Of Betaine-Aldehyde Dehydrogenase		4e-10
3i44_A	497	Crystal Structure Of Aldehyde Dehydrogenase From Ba		6e-10
2bja_A	516	Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd		8e-10
2bhp_A	516	Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd		8e-10
3ty7_A	478	Crystal Structure Of Aldehyde Dehydrogenase Family		1e-09
3b4w_A	495	Crystal Structure Of Mycobacterium Tuberculosis Ald		1e-09
3jz4_C	481	Crystal Structure Of E. Coli Nadp Dependent Enzyme		1e-09
3jz4_A	481	Crystal Structure Of E. Coli Nadp Dependent Enzyme		1e-09
4a0m_A	496	Crystal Structure Of Betaine Aldehyde Dehydrogenase		2e-09
4fr8_A	500	Crystal Structure Of Human Aldehyde Dehydrogenase-2		2e-09
1cw3_A	494	Human Mitochondrial Aldehyde Dehydrogenase Complexe		2e-09
3iwk_A	503	Crystal Structure Of Aminoaldehyde Dehydrogenase 1		4e-09
1t90_A	486	Crystal Structure Of Methylmalonate Semialdehyde De		4e-09
1t90_A	486	Crystal Structure Of Methylmalonate Semialdehyde De		2e-05
3ifg_A	484	Crystal Structure Of Succinate-Semialdehyde Dehydro		7e-09
4i8q_A	514	Structure Of The Aminoaldehyde Dehydrogenase 1 E260		2e-08
4i8q_A	514	Structure Of The Aminoaldehyde Dehydrogenase 1 E260		3e-08
4i9b_A	517	Structure Of Aminoaldehyde Dehydrogenase 1 From Sol		2e-08
4i8p_A	520	Crystal Structure Of Aminoaldehyde Dehydrogenase 1a		5e-08
3ek1_A	504	Crystal Structure Of Aldehyde Dehydrogenase From Br		5e-08
3iwj_A	503	Crystal Structure Of Aminoaldehyde Dehydrogenase 2		9e-08
3rh9_A	506	The Crystal Structure Of Oxidoreductase From Marino		9e-08
3rh9_A	506	The Crystal Structure Of Oxidoreductase From Marino		2e-06
3pqa_A	486	Crystal Structure Of Glyceraldehyde-3-Phosphate Deh		1e-07
2d4e_A	515	Crystal Structure Of The Hpcc From Thermus Thermoph		2e-07
3ros_A	484	Crystal Structure Of Nad-Dependent Aldehyde Dehydro		2e-07
4h7n_A	474	The Structure Of Putative Aldehyde Dehydrogenase Pu		3e-07
3qan_A	538	Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy		3e-07
3qan_A	538	Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy		2e-04
4f9i_A	1026	Crystal Structure Of Proline Utilization A (Puta) F		4e-07
3u4j_A	528	Crystal Structure Of Nad-Dependent Aldehyde Dehydro		2e-06
2id2_A	475	Gapn T244s Mutant X-Ray Structure At 2.5 A Length =		2e-06
2id2_A	475	Gapn T244s Mutant X-Ray Structure At 2.5 A Length =		6e-05
1euh_A	475	Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase		2e-06
1euh_A	475	Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase		6e-05
3prl_A	505	Crystal Structure Of Nadp-Dependent Glyceraldehyde-		2e-06
2esd_A	475	Crystal Structure Of Thioacylenzyme Intermediate Of		1e-05
2esd_A	475	Crystal Structure Of Thioacylenzyme Intermediate Of		6e-05
3ju8_A	490	Crystal Structure Of Succinylglutamic Semialdehyde		2e-05
1qi1_A	475	Ternary Complex Of An Nadp Dependent Aldehyde Dehyd		2e-05
1qi1_A	475	Ternary Complex Of An Nadp Dependent Aldehyde Dehyd		6e-05
3r64_A	508	Crystal Structure Of A Nad-Dependent Benzaldehyde D		3e-05
3lv1_A	457	Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy		6e-05
3v9h_A	566	Crystal Structure Of Human 1-Pyrroline-5-Carboxylat		1e-04
3v9g_A	566	Crystal Structure Of Human 1-Pyrroline-5-Carboxylat		1e-04
3v9i_A	566	Crystal Structure Of Human 1-Pyrroline-5-Carboxylat		1e-04
1uxv_A	501	Structural Basis For Allosteric Regulation And Subs		1e-04
1ad3_A	452	Class 3 Aldehyde Dehydrogenase Complex With Nicotin		1e-04
1ky8_A	501	Crystal Structure Of The Non-Phosphorylating Glycer		1e-04
2w8n_A	487	The Crytal Structure Of The Oxidized Form Of Human		2e-04
4e4g_A	521	Crystal Structure Of Putative Methylmalonate-Semial		2e-04
2w8p_A	487	The Crystal Structure Of Human C340a Ssadh Length =		2e-04
1uxn_A	501	Structural Basis For Allosteric Regulation And Subs		2e-04
3sza_A	469	Crystal Structure Of Human Aldh3a1 - Apo Form Lengt		2e-04
3v9j_A	563	Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylat		9e-04

>pdb|2JG7|A Chain A, Crystal Structure Of Seabream Antiquitin And Elucidation Of Its Substrate Specificity Length = 510

Iteration: 1
 Score =  267 bits (682), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 141/259 (54%), Positives = 167/259 (64%), Gaps = 59/259 (22%)
Query: 195 LVGVAVQSRFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRC-TTTRRLF-- 251
           +V + VQ RFG+ LLELGGNNAIIV EDADLNL     VFA  GTAGQRC TT R +   
Sbjct: 252 MVAMMVQERFGRKLLELGGNNAIIVFEDADLNLVVPSAVFASVGTAGQRCTTTRRLMLHE 311
Query: 252 -------------------------------LHKKK------------------------ 256
                                          LH K+                        
Sbjct: 312 SVHDAVVERIAKAYKQVRIGDPWDPSTLYGPLHTKQAVDQYLAAIEQAKQQGGTLVCGGK 371
Query: 257 -IDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIF 315
            +DRPG +VEPTI+TGL H++ +VH ETF PI+YV  F + +EA  WNNEV+QGLSSSIF
Sbjct: 372 VMDRPGNYVEPTIITGLAHDAPIVHTETFVPILYVLKFKTEEEAFAWNNEVQQGLSSSIF 431
Query: 316 TKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRS 375
           TKD+  +F+WLGP+GSDCG++NVNIPT+GAEIGGAFGGEK+TGGGRESGSDSWKQY RRS
Sbjct: 432 TKDLGRVFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDSWKQYMRRS 491
Query: 376 TVTINHGKEITLAQGIKFE 394
           T TIN+ K++ LAQGIKFE
Sbjct: 492 TCTINYSKDLPLAQGIKFE 510

>pdb|2J6L|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase Length = 500

Iteration: 1
 Score =  235 bits (600), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 125/245 (51%), Positives = 150/245 (61%), Gaps = 59/245 (24%)
Query: 196 VGVAVQSRFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK 255
           VG+ VQ RFG+ LLELGGNNAII  EDADL+L     +FA  GTAGQRCTT RRLF+H+ 
Sbjct: 255 VGLMVQERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHES 314
Query: 256 KID-------------RPGYFVEPTIVTG------------------------------- 271
             D             R G   +P ++ G                               
Sbjct: 315 IHDEVVNRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKV 374
Query: 272 ---------------LPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFT 316
                          L H++ + H ETFAPI+YVF F + +E   WNNEVKQGLSSSIFT
Sbjct: 375 MDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSIFT 434
Query: 317 KDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRST 376
           KD+  +F+WLGP+GSDCG++NVNIPT+GAEIGGAFGGEK+TGGGRESGSD+WKQY RRST
Sbjct: 435 KDLGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDAWKQYMRRST 494
Query: 377 VTINH 381
            TIN+
Sbjct: 495 CTINY 499

>pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound Length = 499

Iteration: 1
 Score = 79.0 bits (193), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 104/479 (21%), Positives = 169/479 (35%), Gaps = 143/479 (29%)
Query: 39  VYDGTSWK--ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRXXXXXXXX---XXX 93
           ++    W+   +G + P  NP+TGE +  VQ+ +  D  + ++++R              
Sbjct: 21  IFINNEWQNSESGRVFPVCNPATGEQVCEVQEADKVDIDKAVQAARLAFSLGSVWRRMDA 80
Query: 94  PRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIG-EVQEFIDICDYAVGLSR---- 148
             RG ++ ++ D +      L  + SL  GK   +    ++Q  I    Y  G +     
Sbjct: 81  SERGRLLDKLADLVERDRATLATMESLNGGKPFLQAFYIDLQGVIKTLRYYAGWADKIHG 140
Query: 149 ----------TYS--------GSILPSERPGHVLLENWN-------------------PL 171
                     T++        G I+P   P  +L+  W                    PL
Sbjct: 141 MTIPVDGDYFTFTRHEPIGVCGQIIPWNFP--LLMFTWKIAPALCCGNTVVIKPAEQTPL 198
Query: 172 GVV---GIISAFNFPVAV------YGWNAAIAL----------------VGVAVQ----- 201
             +    +I    FP  V      YG  A  A+                VG  +Q     
Sbjct: 199 SALYMGALIKEAGFPPGVVNILPGYGPTAGAAIASHIGIDKIAFTGSTEVGKLIQEAAGR 258
Query: 202 SRFGKLLLELGGNNAIIVNEDADLNLA----QQCLVF---ACCGTAGQRC---------- 244
           S   ++ LELGG +  I+  DADL+ A     Q + F    CC TAG R           
Sbjct: 259 SNLKRVTLELGGKSPNIIFADADLDYAVEQAHQGVFFNQGQCC-TAGSRIFVEESIYEEF 317
Query: 245 -------------------TTTRRLFLHKKKID------------------------RPG 261
                              TT +   + KK+ +                        R G
Sbjct: 318 VKRSVERAKRRIVGSPFDPTTEQGPQIDKKQYNKILELIQSGVAEGAKLECGGKGLGRKG 377
Query: 262 YFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTN 321
           +F+EPT+ + +  + R+   E F P+  +  F ++DE I   N    GL +++FT D+  
Sbjct: 378 FFIEPTVFSNVTDDMRIAKEEIFGPVQEILRFKTMDEVIERANNSDFGLVAAVFTNDINK 437
Query: 322 LFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTIN 380
               +       G + +N   N       FGG K +G GRE G    ++Y    TVT+ 
Sbjct: 438 AL--MVSSAMQAGTVWINC-YNALNAQSPFGGFKMSGNGREMGEFGLREYSEVKTVTVK 493

>pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nadh And Mg2+ Length = 500

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 99/467 (21%), Positives = 164/467 (35%), Gaps = 143/467 (30%)
Query: 50  EIIPSINPSTGETIASVQQGNVQDYHRCIESSRXXXXXXX---XXXXPRRGEIVRQIGDA 106
           +  P++NPSTGE I  V +G+ +D  + ++++R                RG ++ ++ D 
Sbjct: 35  KTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADL 94
Query: 107 LRHKLVPLGQLVSLEMGK-ILAEGIGEVQEFIDICDYAVGLSRTYSGS------------ 153
           +      L  L +L+ GK  +   + ++   +    Y  G +  Y G             
Sbjct: 95  IERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYT 154
Query: 154 ----------ILPSERPGHVLLENWN----------------------PLGVVGIISAFN 181
                     I+P   P  +L++ W                        L V  +I    
Sbjct: 155 RHEPVGVCGQIIPWNFP--LLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAG 212
Query: 182 FPVAV------YGWNAAIAL----------------VGVAVQ-----SRFGKLLLELGGN 214
           FP  V      +G  A  A+                +G  +Q     S   ++ LELGG 
Sbjct: 213 FPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGK 272
Query: 215 NAIIVNEDADLNLAQQCLVFAC------CGTAGQRCTTTRRLF----------------- 251
           +  I+  DAD++ A +   FA       C  AG R      ++                 
Sbjct: 273 SPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVG 332
Query: 252 ---------------LHKKKI----------------------DRPGYFVEPTIVTGLPH 274
                             KKI                      DR GYF++PT+   +  
Sbjct: 333 NPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADR-GYFIQPTVFGDVQD 391
Query: 275 NSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCG 334
              +   E F P++ +  F +++E +   N    GL++++FTKD+     +L  Q    G
Sbjct: 392 GMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKA-NYLS-QALQAG 449
Query: 335 LINVN-IPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTIN 380
            + VN     GA+    FGG K +G GRE G    + Y    TVT+ 
Sbjct: 450 TVWVNCYDVFGAQ--SPFGGYKMSGSGRELGEYGLQAYTEVKTVTVK 494

>pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 73/152 (48%), Gaps = 2/152 (1%)
Query: 47  ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRXXXXXXXXXXXPRRGEIVRQIGDA 106
           ++G    +INP+ GE +A VQ+ + +D  R ++S+             +R  I+R+  D 
Sbjct: 19  SSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDI 78
Query: 107 LRHKLVPLGQLVSLEMGKILAEGIG-EVQEFIDICDYAVGLSRTYSGSILPSERPGHVLL 165
           LR +   L  L +L+ GK LAE    ++    D+ +Y  GL     G  +P      V  
Sbjct: 79  LRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYT 138
Query: 166 ENWNPLGVVGIISAFNFPVAVYGWNAAIALVG 197
               PLGVV  I A+N+PV +  W +A AL  
Sbjct: 139 RR-EPLGVVAGIGAWNYPVQIALWKSAPALAA 169

>pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 62/123 (50%), Gaps = 5/123 (4%)
Query: 261 GYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVT 320
           G +V PT+ T    +  +V  E F P++ +  +D  DEAI   N+ + GL++ + T+D+ 
Sbjct: 366 GAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLA 425
Query: 321 NLFKWLGPQGSDCGLINVNI-PTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTI 379
              + +     + G+  +N    + AE+    GG K +G GRE+G  +   Y R  +V +
Sbjct: 426 RAHRAI--HRLEAGICWINTWGESPAEM--PVGGYKQSGVGRENGLTTLAHYTRIKSVQV 481
Query: 380 NHG 382
             G
Sbjct: 482 ELG 484

>pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa With Nad(P)h-Catalytic Thiol Adduct. Length = 489

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 73/152 (48%), Gaps = 2/152 (1%)
Query: 47  ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRXXXXXXXXXXXPRRGEIVRQIGDA 106
           ++G    +INP+ GE +A VQ+ + +D  R ++S+             +R  I+R+  D 
Sbjct: 18  SSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDI 77
Query: 107 LRHKLVPLGQLVSLEMGKILAEGIG-EVQEFIDICDYAVGLSRTYSGSILPSERPGHVLL 165
           LR +   L  L +L+ GK LAE    ++    D+ +Y  GL     G  +P      V  
Sbjct: 78  LRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYT 137
Query: 166 ENWNPLGVVGIISAFNFPVAVYGWNAAIALVG 197
               PLGVV  I A+N+PV +  W +A AL  
Sbjct: 138 RR-EPLGVVAGIGAWNYPVQIALWKSAPALAA 168

>pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa With Nad(P)h-Catalytic Thiol Adduct. Length = 489

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 62/123 (50%), Gaps = 5/123 (4%)
Query: 261 GYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVT 320
           G +V PT+ T    +  +V  E F P++ +  +D  DEAI   N+ + GL++ + T+D+ 
Sbjct: 365 GAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLA 424
Query: 321 NLFKWLGPQGSDCGLINVNI-PTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTI 379
              + +     + G+  +N    + AE+    GG K +G GRE+G  +   Y R  +V +
Sbjct: 425 RAHRAI--HRLEAGICWINTWGESPAEM--PVGGYKQSGVGRENGLTTLAHYTRIKSVQV 480
Query: 380 NHG 382
             G
Sbjct: 481 ELG 483

>pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa Length = 489

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 73/152 (48%), Gaps = 2/152 (1%)
Query: 47  ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRXXXXXXXXXXXPRRGEIVRQIGDA 106
           ++G    +INP+ GE +A VQ+ + +D  R ++S+             +R  I+R+  D 
Sbjct: 18  SSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDI 77
Query: 107 LRHKLVPLGQLVSLEMGKILAEGIG-EVQEFIDICDYAVGLSRTYSGSILPSERPGHVLL 165
           LR +   L  L +L+ GK LAE    ++    D+ +Y  GL     G  +P      V  
Sbjct: 78  LRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYT 137
Query: 166 ENWNPLGVVGIISAFNFPVAVYGWNAAIALVG 197
               PLGVV  I A+N+PV +  W +A AL  
Sbjct: 138 RR-EPLGVVAGIGAWNYPVQIALWKSAPALAA 168

>pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa Length = 489

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 62/123 (50%), Gaps = 5/123 (4%)
Query: 261 GYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVT 320
           G +V PT+ T    +  +V  E F P++ +  +D  DEAI   N+ + GL++ + T+D+ 
Sbjct: 365 GAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLA 424
Query: 321 NLFKWLGPQGSDCGLINVNI-PTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTI 379
              + +     + G+  +N    + AE+    GG K +G GRE+G  +   Y R  +V +
Sbjct: 425 RAHRAI--HRLEAGICWINTWGESPAEM--PVGGYKQSGVGRENGLTTLAHYTRIKSVQV 480
Query: 380 NHG 382
             G
Sbjct: 481 ELG 483

>pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 73/152 (48%), Gaps = 2/152 (1%)
Query: 47  ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRXXXXXXXXXXXPRRGEIVRQIGDA 106
           ++G    +INP+ GE +A VQ+ + +D  R ++S+             +R  I+R+  D 
Sbjct: 19  SSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDI 78
Query: 107 LRHKLVPLGQLVSLEMGKILAEGIG-EVQEFIDICDYAVGLSRTYSGSILPSERPGHVLL 165
           LR +   L  L +L+ GK LAE    ++    D+ +Y  GL     G  +P      V  
Sbjct: 79  LRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYT 138
Query: 166 ENWNPLGVVGIISAFNFPVAVYGWNAAIALVG 197
               PLGVV  I A+N+PV +  W +A AL  
Sbjct: 139 RR-EPLGVVAGIGAWNYPVQIALWKSAPALAA 169

>pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 62/123 (50%), Gaps = 5/123 (4%)
Query: 261 GYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVT 320
           G +V PT+ T    +  +V  E F P++ +  +D  DEAI   N+ + GL++ + T+D+ 
Sbjct: 366 GAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLA 425
Query: 321 NLFKWLGPQGSDCGLINVNI-PTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTI 379
              + +     + G+  +N    + AE+    GG K +G GRE+G  +   Y R  +V +
Sbjct: 426 RAHRAI--HRLEAGICWINTWGESPAEM--PVGGYKQSGVGRENGLTTLAHYTRIKSVQV 481
Query: 380 NHG 382
             G
Sbjct: 482 ELG 484

>pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 99/467 (21%), Positives = 164/467 (35%), Gaps = 143/467 (30%)
Query: 50  EIIPSINPSTGETIASVQQGNVQDYHRCIESSRXXXXXXX---XXXXPRRGEIVRQIGDA 106
           +  P++NPSTGE I  V +G+ +D  + ++++R                RG ++ ++ D 
Sbjct: 35  KTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADL 94
Query: 107 LRHKLVPLGQLVSLEMGK-ILAEGIGEVQEFIDICDYAVGLSRTYSGS------------ 153
           +      L  L +L+ GK  +   + ++   +    Y  G +  Y G             
Sbjct: 95  IERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYT 154
Query: 154 ----------ILPSERPGHVLLENWN----------------------PLGVVGIISAFN 181
                     I+P   P  +L++ W                        L V  +I    
Sbjct: 155 RHEPVGVCGQIIPWNFP--LLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAG 212
Query: 182 FPVAV------YGWNAAIAL----------------VGVAVQ-----SRFGKLLLELGGN 214
           FP  V      +G  A  A+                +G  +Q     S   ++ LELGG 
Sbjct: 213 FPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGK 272
Query: 215 NAIIVNEDADLNLAQQCLVFAC------CGTAGQRCTTTRRLF----------------- 251
           +  I+  DAD++ A +   FA       C  AG R      ++                 
Sbjct: 273 SPNIIMSDADMDWAVEQAHFALFFNQGQCXCAGSRTFVQEDIYDEFVERSVARAKSRVVG 332
Query: 252 ---------------LHKKKI----------------------DRPGYFVEPTIVTGLPH 274
                             KKI                      DR GYF++PT+   +  
Sbjct: 333 NPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADR-GYFIQPTVFGDVQD 391
Query: 275 NSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCG 334
              +   E F P++ +  F +++E +   N    GL++++FTKD+     +L  Q    G
Sbjct: 392 GMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKA-NYLS-QALQAG 449
Query: 335 LINVN-IPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTIN 380
            + VN     GA+    FGG K +G GRE G    + Y    TVT+ 
Sbjct: 450 TVWVNCYDVFGAQ--SPFGGYKMSGSGRELGEYGLQAYTEVKTVTVK 494

>pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa In Complex With Nadph Length = 490

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 73/152 (48%), Gaps = 2/152 (1%)
Query: 47  ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRXXXXXXXXXXXPRRGEIVRQIGDA 106
           ++G    +INP+ GE +A VQ+ + +D  R ++S+             +R  I+R+  D 
Sbjct: 19  SSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDI 78
Query: 107 LRHKLVPLGQLVSLEMGKILAEGIG-EVQEFIDICDYAVGLSRTYSGSILPSERPGHVLL 165
           LR +   L  L +L+ GK LAE    ++    D+ +Y  GL     G  +P      V  
Sbjct: 79  LRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYT 138
Query: 166 ENWNPLGVVGIISAFNFPVAVYGWNAAIALVG 197
               PLGVV  I A+N+PV +  W +A AL  
Sbjct: 139 RR-EPLGVVAGIGAWNYPVQIALWKSAPALAA 169

>pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa In Complex With Nadph Length = 490

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 62/123 (50%), Gaps = 5/123 (4%)
Query: 261 GYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVT 320
           G +V PT+ T    +  +V  E F P++ +  +D  DEAI   N+ + GL++ + T+D+ 
Sbjct: 366 GAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLA 425
Query: 321 NLFKWLGPQGSDCGLINVNI-PTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTI 379
              + +     + G+  +N    + AE+    GG K +G GRE+G  +   Y R  +V +
Sbjct: 426 RAHRAI--HRLEAGICWINTWGESPAEM--PVGGYKQSGVGRENGLTTLAHYTRIKSVQV 481
Query: 380 NHG 382
             G
Sbjct: 482 ELG 484

>pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500

Iteration: 1
 Score = 72.4 bits (176), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 99/467 (21%), Positives = 164/467 (35%), Gaps = 143/467 (30%)
Query: 50  EIIPSINPSTGETIASVQQGNVQDYHRCIESSRXXXXXXX---XXXXPRRGEIVRQIGDA 106
           +  P++NPSTGE I  V +G+ +D  + ++++R                RG ++ ++ D 
Sbjct: 35  KTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADL 94
Query: 107 LRHKLVPLGQLVSLEMGK-ILAEGIGEVQEFIDICDYAVGLSRTYSGS------------ 153
           +      L  L +L+ GK  +   + ++   +    Y  G +  Y G             
Sbjct: 95  IERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYT 154
Query: 154 ----------ILPSERPGHVLLENWN----------------------PLGVVGIISAFN 181
                     I+P   P  +L++ W                        L V  +I    
Sbjct: 155 RHEPVGVCGQIIPWNFP--LLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAG 212
Query: 182 FPVAV------YGWNAAIAL----------------VGVAVQ-----SRFGKLLLELGGN 214
           FP  V      +G  A  A+                +G  +Q     S   ++ LELGG 
Sbjct: 213 FPPGVVNIVPGFGPTAGAAIASHEDVDKVAFAGSTEIGRVIQVAAGSSNLKRVTLELGGK 272
Query: 215 NAIIVNEDADLNLAQQCLVFAC------CGTAGQRCTTTRRLF----------------- 251
           +  I+  DAD++ A +   FA       C  AG R      ++                 
Sbjct: 273 SPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVG 332
Query: 252 ---------------LHKKKI----------------------DRPGYFVEPTIVTGLPH 274
                             KKI                      DR GYF++PT+   +  
Sbjct: 333 NPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADR-GYFIQPTVFGDVQD 391
Query: 275 NSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCG 334
              +   E F P++ +  F +++E +   N    GL++++FTKD+     +L  Q    G
Sbjct: 392 GMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKA-NYLS-QALQAG 449
Query: 335 LINVN-IPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTIN 380
            + VN     GA+    FGG K +G GRE G    + Y    TVT+ 
Sbjct: 450 TVWVNCYDVFGAQ--SPFGGYKMSGSGRELGEYGLQAYTEVKTVTVK 494

>pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase Length = 500

Iteration: 1
 Score = 72.4 bits (176), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 99/467 (21%), Positives = 164/467 (35%), Gaps = 143/467 (30%)
Query: 50  EIIPSINPSTGETIASVQQGNVQDYHRCIESSRXXXXXXX---XXXXPRRGEIVRQIGDA 106
           +  P++NPSTGE I  V +G+ +D  + ++++R                RG ++ ++ D 
Sbjct: 35  KTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADL 94
Query: 107 LRHKLVPLGQLVSLEMGK-ILAEGIGEVQEFIDICDYAVGLSRTYSGS------------ 153
           +      L  L +L+ GK  +   + ++   +    Y  G +  Y G             
Sbjct: 95  IERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYT 154
Query: 154 ----------ILPSERPGHVLLENWN----------------------PLGVVGIISAFN 181
                     I+P   P  +L++ W                        L V  +I    
Sbjct: 155 RHEPVGVCGQIIPWNFP--LLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAG 212
Query: 182 FPVAV------YGWNAAIAL----------------VGVAVQ-----SRFGKLLLELGGN 214
           FP  V      +G  A  A+                +G  +Q     S   ++ LELGG 
Sbjct: 213 FPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGK 272
Query: 215 NAIIVNEDADLNLAQQCLVFAC------CGTAGQRCTTTRRLF----------------- 251
           +  I+  DAD++ A +   FA       C  AG R      ++                 
Sbjct: 273 SPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVG 332
Query: 252 ---------------LHKKKI----------------------DRPGYFVEPTIVTGLPH 274
                             KKI                      DR GYF++PT+   +  
Sbjct: 333 NPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADR-GYFIQPTVFGDVQD 391
Query: 275 NSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCG 334
              +   E F P++ +  F +++E +   N    GL++++FTKD+     +L  Q    G
Sbjct: 392 GMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKA-NYLS-QALQAG 449
Query: 335 LINVN-IPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTIN 380
            + VN     GA+    FGG K +G GRE G    + Y    TVT+ 
Sbjct: 450 TVWVNCYDVFGAQ--SPFGGYKMSGSGRELGEYGLQAYTEVKTVTVK 494

>pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 498

Iteration: 1
 Score = 71.6 bits (174), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 59/122 (48%), Gaps = 3/122 (2%)
Query: 261 GYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVT 320
           G+F +PT+V G      +V RE F P+V V  F   D+A+ W N+   GL+SS++TKD++
Sbjct: 380 GFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAWANDSDYGLASSVWTKDIS 439
Query: 321 NLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTIN 380
              +        C  IN +            GG K +G G++    + + Y     + IN
Sbjct: 440 KAXRAASRLQYGCTWINTHFXLTNEX---PHGGIKQSGYGKDXSVYALEDYTAVRHIXIN 496
Query: 381 HG 382
           HG
Sbjct: 497 HG 498

>pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 98/467 (20%), Positives = 164/467 (35%), Gaps = 143/467 (30%)
Query: 50  EIIPSINPSTGETIASVQQGNVQDYHRCIESSRXXXXXXX---XXXXPRRGEIVRQIGDA 106
           +  P++NPSTGE I  V +G+ +D  + ++++R                RG ++ ++ D 
Sbjct: 35  KTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADL 94
Query: 107 LRHKLVPLGQLVSLEMGK-ILAEGIGEVQEFIDICDYAVGLSRTYSGS------------ 153
           +      L  L +L+ GK  +   + ++   +    Y  G +  Y G             
Sbjct: 95  IERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYT 154
Query: 154 ----------ILPSERPGHVLLENWN----------------------PLGVVGIISAFN 181
                     I+P   P  +L++ W                        L V  +I    
Sbjct: 155 RHEPVGVCGQIIPWNFP--LLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAG 212
Query: 182 FPVAV------YGWNAAIAL----------------VGVAVQ-----SRFGKLLLELGGN 214
           FP  V      +G  A  A+                +G  +Q     S   ++ LELGG 
Sbjct: 213 FPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGK 272
Query: 215 NAIIVNEDADLNLAQQCLVFAC------CGTAGQRCTTTRRLF----------------- 251
           +  I+  DAD++ A +   FA       C  AG R      ++                 
Sbjct: 273 SPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVG 332
Query: 252 ---------------LHKKKI----------------------DRPGYFVEPTIVTGLPH 274
                             KKI                      DR GYF++PT+   +  
Sbjct: 333 NPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADR-GYFIQPTVFGDVQD 391
Query: 275 NSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCG 334
              +   E F P++ +  F +++E +   N    GL++++FTKD+     +L  Q    G
Sbjct: 392 GMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKA-NYLS-QALQAG 449
Query: 335 LINVN-IPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTIN 380
            + VN     GA+    FGG K +G G+E G    + Y    TVT+ 
Sbjct: 450 TVWVNCYDVFGAQ--SPFGGYKMSGSGQELGEYGLQAYTEVKTVTVK 494

>pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Complexed With Agonist Alda-1 Length = 500

Iteration: 1
 Score = 68.2 bits (165), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 96/458 (20%), Positives = 160/458 (34%), Gaps = 143/458 (31%)
Query: 50  EIIPSINPSTGETIASVQQGNVQDYHRCIESSRXXXXXXX---XXXXPRRGEIVRQIGDA 106
           +  P++NPSTGE I  V +G+ +D  + ++++R                RG ++ ++ D 
Sbjct: 35  KTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADL 94
Query: 107 LRHKLVPLGQLVSLEMGK-ILAEGIGEVQEFIDICDYAVGLSRTYSGS------------ 153
           +      L  L +L+ GK  +   + ++   +    Y  G +  Y G             
Sbjct: 95  IERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYT 154
Query: 154 ----------ILPSERPGHVLLENWN----------------------PLGVVGIISAFN 181
                     I+P   P  +L++ W                        L V  +I    
Sbjct: 155 RHEPVGVCGQIIPWNFP--LLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAG 212
Query: 182 FPVAV------YGWNAAIAL----------------VGVAVQ-----SRFGKLLLELGGN 214
           FP  V      +G  A  A+                +G  +Q     S   ++ LELGG 
Sbjct: 213 FPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGK 272
Query: 215 NAIIVNEDADLNLAQQCLVFAC------CGTAGQRCTTTRRLF----------------- 251
           +  I+  DAD++ A +   FA       C  AG R      ++                 
Sbjct: 273 SPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVG 332
Query: 252 ---------------LHKKKI----------------------DRPGYFVEPTIVTGLPH 274
                             KKI                      DR GYF++PT+   +  
Sbjct: 333 NPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADR-GYFIQPTVFGDVQD 391
Query: 275 NSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCG 334
              +   E F P++ +  F +++E +   N    GL++++FTKD+     +L  Q    G
Sbjct: 392 GMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKA-NYLS-QALQAG 449
Query: 335 LINVN-IPTNGAEIGGAFGGEKYTGGGRESGSDSWKQY 371
            + VN     GA+    FGG K +G GRE G    + Y
Sbjct: 450 TVWVNCYDVFGAQ--SPFGGYKMSGSGRELGEYGLQAY 485

>pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Apo Form Length = 500

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 96/458 (20%), Positives = 160/458 (34%), Gaps = 143/458 (31%)
Query: 50  EIIPSINPSTGETIASVQQGNVQDYHRCIESSRXXXXXXX---XXXXPRRGEIVRQIGDA 106
           +  P++NPSTGE I  V +G+ +D  + ++++R                RG ++ ++ D 
Sbjct: 35  KTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADL 94
Query: 107 LRHKLVPLGQLVSLEMGK-ILAEGIGEVQEFIDICDYAVGLSRTYSGS------------ 153
           +      L  L +L+ GK  +   + ++   +    Y  G +  Y G             
Sbjct: 95  IERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYT 154
Query: 154 ----------ILPSERPGHVLLENWN----------------------PLGVVGIISAFN 181
                     I+P   P  +L++ W                        L V  +I    
Sbjct: 155 RHEPVGVCGQIIPWNFP--LLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAG 212
Query: 182 FPVAV------YGWNAAIAL----------------VGVAVQ-----SRFGKLLLELGGN 214
           FP  V      +G  A  A+                +G  +Q     S   ++ LELGG 
Sbjct: 213 FPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGK 272
Query: 215 NAIIVNEDADLNLAQQCLVFAC------CGTAGQRCTTTRRLF----------------- 251
           +  I+  DAD++ A +   FA       C  AG R      ++                 
Sbjct: 273 SPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVG 332
Query: 252 ---------------LHKKKI----------------------DRPGYFVEPTIVTGLPH 274
                             KKI                      DR GYF++PT+   +  
Sbjct: 333 NPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADR-GYFIQPTVFGDVQD 391
Query: 275 NSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCG 334
              +   E F P++ +  F +++E +   N    GL++++FTKD+     +L  Q    G
Sbjct: 392 GMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKA-NYLS-QALQAG 449
Query: 335 LINVN-IPTNGAEIGGAFGGEKYTGGGRESGSDSWKQY 371
            + VN     GA+    FGG K +G GRE G    + Y
Sbjct: 450 TVWVNCYDVFGAQ--SPFGGYKMSGSGRELGEYGLQAY 485

>pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde Dehydrogenase From Salmonella Typhimurium Lt2 With Bound Nad Length = 462

Iteration: 1
 Score = 65.5 bits (158), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 67/275 (24%), Positives = 97/275 (35%), Gaps = 81/275 (29%)
Query: 54  SINPSTGETIASVQQGNVQDYHRCIESSRXXXXXXXXXXXPRRGEIVRQIGDALRHKLVP 113
           S+NP+TG+T+A+    N Q+    +  +             +R + +R IG ALR     
Sbjct: 11  SVNPATGQTLAAXPWANAQEIEHALSLAASGFKKWKXTSVAQRAQTLRDIGQALRAHAEE 70
Query: 114 LGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLEN------ 167
             Q ++ E GK + +   EV +   +CD+       Y+        P   L+EN      
Sbjct: 71  XAQCITREXGKPIKQARAEVTKSAALCDW-------YAEHGPAXLNPEPTLVENQQAVIE 123
Query: 168 WNPLGVVGIISAFNF-------------------------------------------PV 184
           + PLGV+  I  +NF                                           P 
Sbjct: 124 YRPLGVILAIXPWNFPLWQVLRGAVPILLAGNSYLLKHAPNVTGCAQXIARILAEAGTPA 183
Query: 185 AVYGWNAA-------------IALVGVAVQSR------------FGKLLLELGGNNAIIV 219
            VYGW  A             IA V V    R              K +LELGG++  IV
Sbjct: 184 GVYGWVNANNEGVSQXINDPRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIV 243
Query: 220 NEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHK 254
             DADL LA +  V       GQ C   +R  + +
Sbjct: 244 LNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEE 278

>pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde Dehydrogenase From Salmonella Typhimurium Lt2 With Bound Nad Length = 462

Iteration: 1
 Score = 48.5 bits (114), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 62/136 (45%), Gaps = 9/136 (6%)
Query: 249 RLFLHKKKIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQ 308
           RL L  +KI   G +   T++  +  +     +E F P+  +        A+   N+ + 
Sbjct: 332 RLLLGGEKIAGEGNYYAATVLADVTPDXTAFRQELFGPVAAITVAKDAAHALALANDSEF 391
Query: 309 GLSSSIFTKDVTNLFKWLGPQGS---DCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGS 365
           GLS++IFT D T     L  + +   +CG + +N   + ++   AFGG K +G GRE   
Sbjct: 392 GLSATIFTADDT-----LAAEXAARLECGGVFIN-GYSASDARVAFGGVKKSGFGRELSH 445
Query: 366 DSWKQYCRRSTVTINH 381
               ++C   TV  N 
Sbjct: 446 FGLHEFCNVQTVWKNR 461

>pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain Aldehyde Dehydrogenase (Complexed With Nadh And Betaine Aldehyde) Length = 495

Iteration: 1
 Score = 65.5 bits (158), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 62/121 (51%), Gaps = 3/121 (2%)
Query: 261 GYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVT 320
           GY+  PT++ G   +  +V +E F P+V V PFD+ ++ + W N+ + GL+SS++TKDV 
Sbjct: 378 GYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVG 437
Query: 321 NLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTIN 380
              +        C  +N +     +E+    GG+K +G G++      + Y     V + 
Sbjct: 438 RAHRVSARLQYGCTWVNTHFMLV-SEM--PHGGQKLSGYGKDMSLYGLEDYTVVRHVMVK 494
Query: 381 H 381
           H
Sbjct: 495 H 495

>pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase Length = 517

Iteration: 1
 Score = 65.1 bits (157), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 56/241 (23%), Positives = 90/241 (37%), Gaps = 64/241 (26%)
Query: 202 SRFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLF---------- 251
           S   K+ LELGG + +I+  D DLN A Q  + +     G+ C    RLF          
Sbjct: 280 SNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFV 339
Query: 252 ------LHKKKIDRP-------------------------------------------GY 262
                 + K KI  P                                           G+
Sbjct: 340 QKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGF 399
Query: 263 FVEPTIVTGLPHNSRVVHRETFAPIVYV--FPFDSLDEAITWNNEVKQGLSSSIFTKDVT 320
           F +PT+ T +  +  +   E+F PI+ +  F    +D  ++  N  + GL+S +FT+D+ 
Sbjct: 400 FFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDIN 459
Query: 321 NLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTIN 380
                     +    IN     N  ++   FGG K +G G++ G  +  +Y R  TVT  
Sbjct: 460 KALYVSDKLQAGTVFINT---YNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTVTFE 516
Query: 381 H 381
           +
Sbjct: 517 Y 517

>pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Length = 499

Iteration: 1
 Score = 65.1 bits (157), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 42/123 (34%), Positives = 63/123 (51%), Gaps = 6/123 (4%)
Query: 258 DRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTK 317
           DR GYF++PT+   L     +   E F P++ +  F S++E +   N  K GL++++FTK
Sbjct: 375 DR-GYFIQPTVFGDLQDGMTIAKEEIFGPVMQILKFKSMEEVVGRANNSKYGLAAAVFTK 433
Query: 318 DVTNLFKWLGPQGSDCGLINVN-IPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRST 376
           D+     +L  Q    G + VN     GA+    FGG K +G GRE G    + Y    T
Sbjct: 434 DLDKA-NYLS-QALQAGTVWVNCYDVFGAQ--SPFGGYKLSGSGRELGEYGLQAYTEVKT 489
Query: 377 VTI 379
           VT+
Sbjct: 490 VTV 492

>pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Bacillus Subtilis Subsp. Subtilis Str. 168 Length = 485

Iteration: 1
 Score = 65.1 bits (157), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 55/214 (25%), Positives = 83/214 (38%), Gaps = 58/214 (27%)
Query: 204 FGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRL------------- 250
           F ++ LELGGNN   V  DAD++ A    +F      GQ C    R+             
Sbjct: 247 FKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEK 306
Query: 251 ----------------------FLHKKKID---------------------RPGYFVEPT 267
                                  +++++I+                     R G  + P 
Sbjct: 307 FTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKRVGNVLTPY 366
Query: 268 IVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLG 327
           +  G  +NS++   E FAPI  +    S  EAI   N+ + GLSS++FT D+    K+  
Sbjct: 367 VFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFTSDLEKGEKF-- 424
Query: 328 PQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGR 361
               D G+ +VN  +       AFGG K +G GR
Sbjct: 425 ALQIDSGMTHVNDQSVNDSPNIAFGGNKASGVGR 458

>pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase Length = 517

Iteration: 1
 Score = 65.1 bits (157), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 63/128 (49%), Gaps = 5/128 (3%)
Query: 256 KIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYV--FPFDSLDEAITWNNEVKQGLSSS 313
           ++ RPG+F +PT+ T +  +  +   E+F PI+ +  F    +D  ++  N  + GL+S 
Sbjct: 393 QVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASG 452
Query: 314 IFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCR 373
           +FT+D+           +    IN     N  ++   FGG K +G G++ G  +  +Y R
Sbjct: 453 VFTRDINKALYVSDKLQAGTVFINT---YNKTDVAAPFGGFKQSGFGKDLGEAALNEYLR 509
Query: 374 RSTVTINH 381
             TVT  +
Sbjct: 510 IKTVTFEY 517

>pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517

Iteration: 1
 Score = 64.7 bits (156), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 63/128 (49%), Gaps = 5/128 (3%)
Query: 256 KIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYV--FPFDSLDEAITWNNEVKQGLSSS 313
           ++ RPG+F +PT+ T +  +  +   E+F PI+ +  F    +D  ++  N  + GL+S 
Sbjct: 393 QVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASG 452
Query: 314 IFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCR 373
           +FT+D+           +    IN     N  ++   FGG K +G G++ G  +  +Y R
Sbjct: 453 VFTRDINKALYVSDKLQAGTVFINT---YNKTDVAAPFGGFKQSGFGKDLGEAALNEYLR 509
Query: 374 RSTVTINH 381
             TVT  +
Sbjct: 510 IKTVTFEY 517

>pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadph Length = 517

Iteration: 1
 Score = 64.7 bits (156), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 63/128 (49%), Gaps = 5/128 (3%)
Query: 256 KIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYV--FPFDSLDEAITWNNEVKQGLSSS 313
           ++ RPG+F +PT+ T +  +  +   E+F PI+ +  F    +D  ++  N  + GL+S 
Sbjct: 393 QVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASG 452
Query: 314 IFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCR 373
           +FT+D+           +    IN     N  ++   FGG K +G G++ G  +  +Y R
Sbjct: 453 VFTRDINKALYVSDKLQAGTVFINT---YNKTDVAAPFGGFKQSGFGKDLGEAALNEYLR 509
Query: 374 RSTVTINH 381
             TVT  +
Sbjct: 510 IKTVTFEY 517

>pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517

Iteration: 1
 Score = 64.7 bits (156), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 63/128 (49%), Gaps = 5/128 (3%)
Query: 256 KIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYV--FPFDSLDEAITWNNEVKQGLSSS 313
           ++ RPG+F +PT+ T +  +  +   E+F PI+ +  F    +D  ++  N  + GL+S 
Sbjct: 393 QVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASG 452
Query: 314 IFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCR 373
           +FT+D+           +    IN     N  ++   FGG K +G G++ G  +  +Y R
Sbjct: 453 VFTRDINKALYVSDKLQAGTVFINT---YNKTDVAAPFGGFKQSGFGKDLGEAALNEYLR 509
Query: 374 RSTVTINH 381
             TVT  +
Sbjct: 510 IKTVTFEY 517

>pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadp Length = 517

Iteration: 1
 Score = 64.7 bits (156), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 63/128 (49%), Gaps = 5/128 (3%)
Query: 256 KIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYV--FPFDSLDEAITWNNEVKQGLSSS 313
           ++ RPG+F +PT+ T +  +  +   E+F PI+ +  F    +D  ++  N  + GL+S 
Sbjct: 393 QVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASG 452
Query: 314 IFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCR 373
           +FT+D+           +    IN     N  ++   FGG K +G G++ G  +  +Y R
Sbjct: 453 VFTRDINKALYVSDKLQAGTVFINT---YNKTDVAAPFGGFKQSGFGKDLGEAALNEYLR 509
Query: 374 RSTVTINH 381
             TVT  +
Sbjct: 510 IKTVTFEY 517

>pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound Length = 501

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 55/120 (45%), Gaps = 3/120 (2%)
Query: 261 GYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVT 320
           GYF++PT+ + +  + R+   E F P+  +  F SLD+ I   N    GLS+ IFT D+ 
Sbjct: 379 GYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDID 438
Query: 321 NLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTIN 380
                     S    +N     +       FGG K +G GRE G   + +Y    TVTI 
Sbjct: 439 KAITVSSALQSGTVWVNCYSVVSAQ---CPFGGFKMSGNGRELGEYGFHEYTEVKTVTIK 495

>pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Licheniformis (Target Nysgrc-000337) Length = 538

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/227 (22%), Positives = 89/227 (39%), Gaps = 61/227 (26%)
Query: 201 QSRFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCG------TAGQRCTTTRRLF--- 251
           Q+   +++ E+GG + ++V+ED D+ LA Q +  +  G      +AG R     +++   
Sbjct: 278 QTHLKQVIAEMGGKDTVVVDEDCDIELAAQSIFTSAFGFAGQKCSAGSRAVVHEKVYDEV 337
Query: 252 -------LHKKKIDRP------------------------------------------GY 262
                     KK+  P                                          GY
Sbjct: 338 LKRVIEITESKKVGEPDSADVYMGPVIDQASFNKIMDYIEIGKEEGRLVSGGKGDDSKGY 397
Query: 263 FVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNL 322
           F+EPTI   L   +R++  E F P+V      S DEA+   N  + GL+ ++ TK+  ++
Sbjct: 398 FIEPTIFADLDPKARLMQEEIFGPVVAFSKVSSFDEALEVANNTEYGLTGAVITKNRDHI 457
Query: 323 FKWLGPQGSDCGLINVNIPTNGAEIG-GAFGGEKYTGGGRESGSDSW 368
            +    Q    G +  N    GA +G   FGG K +G   ++G   +
Sbjct: 458 NR--AKQEFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAGGPDY 502

>pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From Escherichia Coli Length = 479

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 67/132 (50%), Gaps = 3/132 (2%)
Query: 249 RLFLHKKKIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQ 308
           R+ L  K ++  GY+  PT++  +     ++H ETF P++ V  FD+L+EAI+  N+   
Sbjct: 350 RVALGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEEAISMANDSDY 409
Query: 309 GLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSW 368
           GL+SSI+T+++    K +  +G   G   +N   N   + G   G + +G G   G    
Sbjct: 410 GLTSSIYTQNLNVAMKAI--KGLKFGETYIN-RENFEAMQGFHAGWRKSGIGGADGKHGL 466
Query: 369 KQYCRRSTVTIN 380
            +Y +   V + 
Sbjct: 467 HEYLQTQVVYLQ 478

>pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin Length = 501

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 54/120 (45%), Gaps = 3/120 (2%)
Query: 261 GYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVT 320
           GYF++PT+ + +  + R+   E F P+  +  F SLDE I   N    GL + +FTKD+ 
Sbjct: 379 GYFIQPTVFSNVTDDMRIAKEEIFGPVQQIMKFKSLDEVIKRANNTYYGLVAGVFTKDLD 438
Query: 321 NLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTIN 380
                     +    +N  +  +     G F   K +G GRE G     +Y    TVT+ 
Sbjct: 439 KAVTVSSALQAGTVWVNCYLAASAQSPAGGF---KMSGHGREMGEYGIHEYTEVKTVTMK 495

>pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase Length = 516

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 53/223 (23%), Positives = 90/223 (40%), Gaps = 60/223 (26%)
Query: 201 QSRFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCG------TAGQRCTTTR------ 248
           Q+ F +  +E GG NAIIV+E AD +LA + +V +  G      +A  R   T+      
Sbjct: 279 QTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPV 338
Query: 249 ---------------------------------------------RLFLHKKKIDRPGYF 263
                                                        +L L  K+++  GYF
Sbjct: 339 LERVLKRAERLSVGPAEENPDLGPVVSAEQERKVLSYIEIGKNEGQLVLGGKRLEGEGYF 398
Query: 264 VEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLF 323
           + PT+ T +P  +R+   E F P++ V       EA+   N+   GL+  ++++   +L 
Sbjct: 399 IAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHL- 457
Query: 324 KWLGPQGSDCGLINVNIPTNGAEIG-GAFGGEKYTGGGRESGS 365
           +W   +    G +  N    GA +G   FGG K +G   ++G+
Sbjct: 458 EW-ARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGA 499

>pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver Length = 503

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 59/128 (46%), Gaps = 15/128 (11%)
Query: 261 GYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVT 320
           GYF+ P ++     +   V  E F P++ V PFD+ +E +   N    GL+S +FT+D++
Sbjct: 379 GYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDIS 438
Query: 321 NLFKWLGPQGSDCGLIN------VNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRR 374
              +      +    IN      V +P         FGG K +G GRE+G  +   Y + 
Sbjct: 439 RAHRVAANLEAGTCYINTYSISPVEVP---------FGGYKMSGFGRENGQATVDYYSQL 489
Query: 375 STVTINHG 382
            TV +  G
Sbjct: 490 KTVIVEMG 497

>pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase Length = 479

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 71/163 (43%), Gaps = 3/163 (1%)
Query: 36  NPGVYDG--TSWKANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRXXXXXXXXXXX 93
           +P   DG   +W+ +   I  +NP+T   I+ +  G  +D  + I+++            
Sbjct: 7   HPMYIDGQFVTWRGDA-WIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPEWEALPA 65
Query: 94  PRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGS 153
             R   +R+I   +R +   +  L+  E GKI      EV    D  DY    +R Y G 
Sbjct: 66  IERASWLRKISAGIRERASEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEGE 125
Query: 154 ILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALV 196
           I+ S+RPG  +L     LGV   I  +NFP  +     A AL+
Sbjct: 126 IIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALL 168

>pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase Length = 479

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 66/132 (50%), Gaps = 3/132 (2%)
Query: 249 RLFLHKKKIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQ 308
           R+    K ++  GY+  PT++  +     ++H ETF P++ V  FD+L++AI+  N+   
Sbjct: 350 RVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDY 409
Query: 309 GLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSW 368
           GL+SSI+T+++    K +  +G   G   +N   N   + G   G + +G G   G    
Sbjct: 410 GLTSSIYTQNLNVAMKAI--KGLKFGETYIN-RENFEAMQGFHAGWRKSGIGGADGKHGL 466
Query: 369 KQYCRRSTVTIN 380
            +Y +   V + 
Sbjct: 467 HEYLQTQVVYLQ 478

>pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Agrobacterium Tumefaciens Length = 517

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 67/135 (49%), Gaps = 4/135 (2%)
Query: 261 GYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVT 320
           G +V+PT+   +  +  +   E F P++ V  FD  DE +   N  + GL+  +FT D+ 
Sbjct: 371 GAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGVFTADLA 430
Query: 321 NLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTIN 380
              + +   G + G + +N   N   +   FGG K +G GRE+ + + + Y    TV ++
Sbjct: 431 RAHRVV--DGLEAGTLWINT-YNLCPVEIPFGGSKQSGFGRENSAAALEHYSELKTVYVS 487
Query: 381 HGK-EITLAQGIKFE 394
            GK +   A+ + F+
Sbjct: 488 TGKVDAPYAENLYFQ 502

>pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E. Coli: The Ternary Complex With Product Bound (L)-Lactate And Nadh. Length = 479

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 71/163 (43%), Gaps = 3/163 (1%)
Query: 36  NPGVYDG--TSWKANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRXXXXXXXXXXX 93
           +P   DG   +W+ +   I  +NP+T   I+ +  G  +D  + I+++            
Sbjct: 7   HPMYIDGQFVTWRGDA-WIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPEWEALPA 65
Query: 94  PRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGS 153
             R   +R+I   +R +   +  L+  E GKI      EV    D  DY    +R Y G 
Sbjct: 66  IERASWLRKISAGIRERASEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEGE 125
Query: 154 ILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALV 196
           I+ S+RPG  +L     LGV   I  +NFP  +     A AL+
Sbjct: 126 IIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALL 168

>pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E. Coli: The Ternary Complex With Product Bound (L)-Lactate And Nadh. Length = 479

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 66/132 (50%), Gaps = 3/132 (2%)
Query: 249 RLFLHKKKIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQ 308
           R+    K ++  GY+  PT++  +     ++H ETF P++ V  FD+L++AI+  N+   
Sbjct: 350 RVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDY 409
Query: 309 GLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSW 368
           GL+SSI+T+++    K +  +G   G   +N   N   + G   G + +G G   G    
Sbjct: 410 GLTSSIYTQNLNVAMKAI--KGLKFGETYIN-RENFEAMQGFHAGWRKSGIGGADGKHGL 466
Query: 369 KQYCRRSTVTIN 380
            +Y +   V + 
Sbjct: 467 HEYLQTQVVYLQ 478

>pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus Length = 520

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 67/151 (44%), Gaps = 2/151 (1%)
Query: 47  ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRXXXXXX--XXXXXPRRGEIVRQIG 104
           AN      INP   E I +V +G  +D  R I ++R               RG+ VR I 
Sbjct: 45  ANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFESGEWSQETAETRGKKVRAIA 104
Query: 105 DALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVL 164
           D ++     L +L +L+ GK L E   ++ +  ++  Y  GL+    G ++ S  P    
Sbjct: 105 DKIKEHREALARLETLDTGKTLEESYADMDDIHNVFMYFAGLADKDGGEMIDSPIPDTES 164
Query: 165 LENWNPLGVVGIISAFNFPVAVYGWNAAIAL 195
                P+GVV  I+ +N+P+    W  A AL
Sbjct: 165 KIVKEPVGVVTQITPWNYPLLQASWKIAPAL 195

>pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus Length = 520

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 58/237 (24%), Positives = 87/237 (36%), Gaps = 66/237 (27%)
Query: 207 LLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFL-------------- 252
           + LELGG N  I+ +DAD  LA    +      AGQ C+   R+ +              
Sbjct: 276 IALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKFEQALID 335
Query: 253 ------------------------HKKKID------------------RP-------GYF 263
                                   H+ KI+                  RP       G F
Sbjct: 336 RVKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLF 395
Query: 264 VEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLF 323
            EPT++T    + R+V  E F P+V V  F++  EAI   N+   GL+ ++F+KD+    
Sbjct: 396 FEPTVITNCDTSMRIVQEEVFGPVVTVEGFETEQEAIQLANDSIYGLAGAVFSKDIGKAQ 455
Query: 324 KWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTIN 380
           +           IN   P         +GG K +G GRE G +  ++Y     +  N
Sbjct: 456 RVANKLKLGTVWINDFHPYFAQ---APWGGYKQSGIGRELGKEGLEEYLVSKHILTN 509

>pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From Pseudoalteromonas Atlantica T6c Length = 497

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 59/241 (24%), Positives = 97/241 (40%), Gaps = 68/241 (28%)
Query: 207 LLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLH------------- 253
           ++LELGG   ++V +DADL+ A +  ++      GQ CT   RL++H             
Sbjct: 254 VMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFLP 313
Query: 254 ----------------------KKKIDRPGYFVE------PTIVTG-------------- 271
                                 +++ID   + V        T+ TG              
Sbjct: 314 LVKGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCW 373
Query: 272 --------LPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLF 323
                   +  ++ VVH ETF PI+ +    S+++AI + N+   GLS+ + T+   N+ 
Sbjct: 374 YEPTVLVDVKQDNIVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGLSAYVHTQSFANIN 433
Query: 324 KWLGPQGSDCGLINVNIPTN-GAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTINHG 382
           + +    SD  +  V I    G +  G   G K +G G E G    +QY  + TV IN  
Sbjct: 434 QAI----SDLEVGEVYINRGMGEQHQGFHNGWKQSGFGGEDGKFGLEQYLEKKTVYINEA 489
Query: 383 K 383
           +
Sbjct: 490 E 490

>pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Bartonella Henselae At 2.0a Resolution Length = 497

Iteration: 1
 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 64/120 (53%), Gaps = 8/120 (6%)
Query: 261 GYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVT 320
           GY+V PT+   +  + R+   E F P++ + PF++ DEA+T  N+ + GL++ I ++D +
Sbjct: 382 GYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDEAVTLANDTEYGLTNYIQSQDRS 441
Query: 321 NLFKWLGPQGSDCGLINVNIPTNGAEI--GGAFGGEKYTGGGRESGSDSWKQYCRRSTVT 378
              +      S  G++ V    NG E+  G  FGG K++G  RE G    K++     ++
Sbjct: 442 KCRRIAAQVRS--GMVEV----NGHELPGGSYFGGVKFSGRAREGGLWGIKEFLDTKAIS 495

>pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nadh Length = 516

Iteration: 1
 Score = 61.6 bits (148), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 52/223 (23%), Positives = 90/223 (40%), Gaps = 60/223 (26%)
Query: 201 QSRFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCG------TAGQRCTTTR------ 248
           Q+ F +  +E GG +AIIV+E AD +LA + +V +  G      +A  R   T+      
Sbjct: 279 QTWFKRAYVETGGKDAIIVDETADFDLAAEGVVVSAYGFQGQKXSAASRLILTQGAYEPV 338
Query: 249 ---------------------------------------------RLFLHKKKIDRPGYF 263
                                                        +L L  K+++  GYF
Sbjct: 339 LERVLKRAERLSVGPAEENPDLGPVVSAEQERKVLSYIEIGKNEGQLVLGGKRLEGEGYF 398
Query: 264 VEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLF 323
           + PT+ T +P  +R+   E F P++ V       EA+   N+   GL+  ++++   +L 
Sbjct: 399 IAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHL- 457
Query: 324 KWLGPQGSDCGLINVNIPTNGAEIG-GAFGGEKYTGGGRESGS 365
           +W   +    G +  N    GA +G   FGG K +G   ++G+
Sbjct: 458 EW-ARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGA 499

>pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nad. Length = 516

Iteration: 1
 Score = 61.6 bits (148), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 52/223 (23%), Positives = 90/223 (40%), Gaps = 60/223 (26%)
Query: 201 QSRFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCG------TAGQRCTTTR------ 248
           Q+ F +  +E GG +AIIV+E AD +LA + +V +  G      +A  R   T+      
Sbjct: 279 QTWFKRAYVETGGKDAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPV 338
Query: 249 ---------------------------------------------RLFLHKKKIDRPGYF 263
                                                        +L L  K+++  GYF
Sbjct: 339 LERVLKRAERLSVGPAEENPDLGPVVSAEQERKVLSYIEIGKNEGQLVLGGKRLEGEGYF 398
Query: 264 VEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLF 323
           + PT+ T +P  +R+   E F P++ V       EA+   N+   GL+  ++++   +L 
Sbjct: 399 IAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHL- 457
Query: 324 KWLGPQGSDCGLINVNIPTNGAEIG-GAFGGEKYTGGGRESGS 365
           +W   +    G +  N    GA +G   FGG K +G   ++G+
Sbjct: 458 EW-ARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGA 499

>pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein From Staphylococcus Aureus Length = 478

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/237 (23%), Positives = 85/237 (35%), Gaps = 66/237 (27%)
Query: 204 FGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTT-TRRL------------ 250
           F K+ LELGG +  IV +D D+  A +          GQ CT  TR L            
Sbjct: 242 FKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAE 301
Query: 251 ----------------------FLHKKKIDR---------------------------PG 261
                                  + KK+ D+                            G
Sbjct: 302 LKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKG 361
Query: 262 YFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTN 321
           YF  PTI   + +   +   E F P+  V  ++ LDEAI   N+ K GL+  +  KD   
Sbjct: 362 YFARPTIFINVDNQXTIAQEEIFGPVXSVITYNDLDEAIQIANDTKYGLAGYVIGKDKET 421
Query: 322 LFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVT 378
           L K    +  + G + +N      ++   FGG K +G GRE G    +++    ++ 
Sbjct: 422 LHKVA--RSIEAGTVEINEAGRKPDL--PFGGYKQSGLGREWGDYGIEEFLEVKSIA 474

>pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde Dehydrogenase Complexed With Nad+ Length = 495

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 64/125 (51%), Gaps = 4/125 (3%)
Query: 261 GYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVT 320
           G+F++PT+   + +   +   E F P++ + P+D+ ++AI   N+   GL+ S++T DV 
Sbjct: 366 GFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVWTTDVP 425
Query: 321 NLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTIN 380
              K    Q    G   +N      + G  FGG K +G GRE+G +  + + ++ +V + 
Sbjct: 426 KGIKI--SQQIRTGTYGINW--YAFDPGSPFGGYKNSGIGRENGPEGVEHFTQQKSVLLP 481
Query: 381 HGKEI 385
            G  +
Sbjct: 482 MGYTV 486

>pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Query: 249 RLFLHKKKIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQ 308
           R+    K  +R G F +PTI+  +P N++V   ETF P+  +F F    + I   N+ + 
Sbjct: 352 RVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEF 411
Query: 309 GLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSW 368
           GL++  + +D++ +F+ +G +  + G++ +N      E+   FGG K +G GRE      
Sbjct: 412 GLAAYFYARDLSRVFR-VG-EALEYGIVGINTGIISNEV-APFGGIKASGLGREGSKYGI 468
Query: 369 KQY 371
           + Y
Sbjct: 469 EDY 471

>pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Query: 249 RLFLHKKKIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQ 308
           R+    K  +R G F +PTI+  +P N++V   ETF P+  +F F    + I   N+ + 
Sbjct: 352 RVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEF 411
Query: 309 GLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSW 368
           GL++  + +D++ +F+ +G +  + G++ +N      E+   FGG K +G GRE      
Sbjct: 412 GLAAYFYARDLSRVFR-VG-EALEYGIVGINTGIISNEV-APFGGIKASGLGREGSKYGI 468
Query: 369 KQY 371
           + Y
Sbjct: 469 EDY 471

>pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Spinach In Complex With Nad Length = 496

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 65/126 (51%), Gaps = 3/126 (2%)
Query: 259 RPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKD 318
           + GY++EPTIVT +  + ++   E F P++ V  F S DEAI   N+ + GL++++F+ D
Sbjct: 367 KKGYYIEPTIVTDISTSMQIWKEEVFGPVLCVKTFSSEDEAIALANDTEYGLAAAVFSND 426
Query: 319 VTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVT 378
           +    +    +  + G + VN  +    +   +GG K +G GRE G    + Y     VT
Sbjct: 427 LERCERIT--KALEVGAVWVNC-SQPCFVQAPWGGIKRSGFGRELGEWGIQNYLNIKQVT 483
Query: 379 INHGKE 384
            +   E
Sbjct: 484 QDISDE 489

>pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In Complex With Nitroglycerin Length = 500

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 62/124 (50%), Gaps = 6/124 (4%)
Query: 258 DRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTK 317
           DR GYF++PT+   +     +   E F P++ +  F +++E +   N    GL++++FTK
Sbjct: 376 DR-GYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTK 434
Query: 318 DVTNLFKWLGPQGSDCGLINVN-IPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRST 376
           D+     +L  Q    G + VN     GA+    FGG K +G GRE G    + Y    T
Sbjct: 435 DLDKA-NYLS-QALQAGTVWVNCYDVFGAQ--SPFGGYKMSGSGRELGEYGLQAYTEVKT 490
Query: 377 VTIN 380
           VT+ 
Sbjct: 491 VTVK 494

>pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nad+ And Mn2+ Length = 494

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 62/124 (50%), Gaps = 6/124 (4%)
Query: 258 DRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTK 317
           DR GYF++PT+   +     +   E F P++ +  F +++E +   N    GL++++FTK
Sbjct: 370 DR-GYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTK 428
Query: 318 DVTNLFKWLGPQGSDCGLINVN-IPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRST 376
           D+     +L  Q    G + VN     GA+    FGG K +G GRE G    + Y    T
Sbjct: 429 DLDKA-NYLS-QALQAGTVWVNCYDVFGAQ--SPFGGYKMSGSGRELGEYGLQAYTEVKT 484
Query: 377 VTIN 380
           VT+ 
Sbjct: 485 VTVK 488

>pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From Pisum Sativum (Psamadh1) Length = 503

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 71/154 (46%), Gaps = 10/154 (6%)
Query: 228 AQQCLVFACCGTA---GQRCTTTRRLFLHKKKIDRPGYFVEPTIVTGLPHNSRVVHRETF 284
           AQ   V  C  +A   G    T  R   H KK    GYFVEPTI+T +  + ++   E F
Sbjct: 340 AQYKKVLNCISSAKSEGATILTGGRRPEHLKK----GYFVEPTIITDVTTSMQIWREEVF 395
Query: 285 APIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNG 344
            P++ V  F + +EAI   N+   GL S++ + D+    +    +    G++ +N     
Sbjct: 396 GPVLAVKTFSTEEEAINLANDTHYGLGSAVMSNDLERCERL--SKALQAGIVWINC-AQP 452
Query: 345 AEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVT 378
           + I   +GG K +G GRE G    + Y     VT
Sbjct: 453 SFIQAPWGGIKRSGFGRELGEWGLENYLSVKQVT 486

>pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde Dehydrogenase From Bacillus Subtilis Length = 486

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 59/141 (41%)
Query: 55  INPSTGETIASVQQGNVQDYHRCIESSRXXXXXXXXXXXPRRGEIVRQIGDALRHKLVPL 114
           +NP+T E +  V     +D     +++            PRR  I+      L      L
Sbjct: 26  VNPATKEVLCQVPISTKEDIDYAAQTAAEAFKTWSKVAVPRRARILFNFQQLLSQHKEEL 85
Query: 115 GQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVV 174
             L+++E GK   E +GEV   I+  ++A G      G  L S            P+GVV
Sbjct: 86  AHLITIENGKNTKEALGEVGRGIENVEFAAGAPSLMMGDSLASIATDVEAANYRYPIGVV 145
Query: 175 GIISAFNFPVAVYGWNAAIAL 195
           G I+ FNFP+ V  W   +A+
Sbjct: 146 GGIAPFNFPMMVPCWMFPMAI 166

>pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde Dehydrogenase From Bacillus Subtilis Length = 486

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 4/130 (3%)
Query: 254 KKKIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSS 313
           ++ +   GYFV PTI   +     +   E FAP++ V    +L EAI   N+ +    + 
Sbjct: 353 RENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGAC 412
Query: 314 IFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEK--YTGGGRESGSDSWKQY 371
           +FT + +N  ++   +  D G++ +N+          F G K  + G    +G DS   Y
Sbjct: 413 LFTSN-SNAIRYFR-ENIDAGMLGINLGVPAPMAFFPFSGWKSSFFGTLHANGKDSVDFY 470
Query: 372 CRRSTVTINH 381
            R+  VT  +
Sbjct: 471 TRKKVVTARY 480

>pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase From Burkholderia Pseudomallei, Part 1 Of 2 Length = 484

Iteration: 1
 Score = 58.2 bits (139), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
Query: 263 FVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNL 322
           F EPT++TG+  +  V   ETF P+  +F F S +E +   N+ + GL++ ++++D+  +
Sbjct: 369 FFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLAAYLYSRDIGRV 428
Query: 323 FKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRE 362
             W   +  + G++ +N      E+   FGG K +G GRE
Sbjct: 429 --WRVAEALEYGMVGINTGLISNEV-APFGGVKQSGLGRE 465

>pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a Mutant From Solanum Lycopersicum (slamadh1-e260a) Length = 514

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 13/162 (8%)
Query: 39  VYDGTSWK--ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRXXXXXXX--XXXXP 94
           +Y G  W+       IP INP+T E I  +     +D    +E++R              
Sbjct: 26  LYIGGEWREPVKKNRIPIINPATEEIIGDIPAATAEDVDIAVEAARKAIARDDWGSTTGA 85
Query: 95  RRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGL-----SRT 149
           +R + +R I   +  K   L  L SL+ GK L E   ++ +     +Y  GL     SR 
Sbjct: 86  QRAKYLRAIAAKVLEKKSVLATLESLDSGKTLYESAADMDDVAGCFEYYAGLAEALDSRR 145
Query: 150 YSGSILPSER-PGHVLLENWNPLGVVGIISAFNFPVAVYGWN 190
            +   L S+    +VL E   PLGVVG+I+ +N+P+ +  W 
Sbjct: 146 MTPVNLNSDSYKSYVLRE---PLGVVGLITPWNYPLLMAIWK 184

>pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a Mutant From Solanum Lycopersicum (slamadh1-e260a) Length = 514

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 68/135 (50%), Gaps = 8/135 (5%)
Query: 259 RPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKD 318
           + GY+V+PTI+T +  +  +   E F P++ V  F + ++AI   N+ K GL +++ +KD
Sbjct: 384 KKGYYVQPTIITDVNTSMEIWKEEVFGPVLCVKTFKTEEQAIELANDTKYGLGAAVMSKD 443
Query: 319 VTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVT 378
           V    ++     +    IN + PT        +GG+K +G GR+ G     ++   + + 
Sbjct: 444 VKRCERFTKAFQTGIIWINCSQPTFNEL---PWGGKKRSGFGRDLG-----KWGLENFLN 495
Query: 379 INHGKEITLAQGIKF 393
           I    E T A+ + F
Sbjct: 496 IKQVTEYTSAEPLAF 510

>pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum Lycopersium (slamadh1) With A Thiohemiacetal Intermediate Length = 517

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 60/247 (24%), Positives = 100/247 (40%), Gaps = 70/247 (28%)
Query: 209 LELGGNNAIIVNEDAD-LNLAQQCLVFACCGTAGQRCT-TTR-------------RLFLH 253
           LELGG + I+V +D D L++A +  +F      GQ C+ T+R             RL   
Sbjct: 272 LELGGKSPIVVFDDIDNLDIAAEWTLFGIFANTGQVCSATSRLIVQENIASAFMDRLLKW 331
Query: 254 KKKI------------------------------------------DRP-----GYFVEP 266
            K I                                          +RP     GY+V+P
Sbjct: 332 TKNIKISDPLEEDCKLGPVVSAGQYEKVLKFISNAKSEGATILCGGERPQHLKKGYYVQP 391
Query: 267 TIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWL 326
           TI+T +  +  +   E F P++ V  F + ++AI   N+ K GL +++ +KDV    ++ 
Sbjct: 392 TIITDVNTSMEIWKEEVFGPVLCVKTFKTEEQAIELANDTKYGLGAAVMSKDVKRCERFT 451
Query: 327 GPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTINHGKEIT 386
               +    IN + PT        +GG+K +G GR+ G     ++   + + I    E T
Sbjct: 452 KAFQTGIIWINCSQPTFNEL---PWGGKKRSGFGRDLG-----KWGLENFLNIKQVTEYT 503
Query: 387 LAQGIKF 393
            A+ + F
Sbjct: 504 SAEPLAF 510

>pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From Zea Mays (zmamadh1a) Length = 520

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 55/118 (46%), Gaps = 3/118 (2%)
Query: 261 GYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVT 320
           G+F+EPTI+T +  +  +   E F P++ V  F + DEAI   N+ + GL+ ++ + D  
Sbjct: 389 GFFIEPTIITDITTSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRE 448
Query: 321 NLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVT 378
              +      + C  +N + P         +GG K +G GRE G      Y     VT
Sbjct: 449 RCQRLSEEIDAGCIWVNCSQPCF---CQAPWGGNKRSGFGRELGEGGIDNYLSVKQVT 503

>pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella Melitensis Biovar Abortus 2308 Length = 504

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 56/116 (48%), Gaps = 13/116 (11%)
Query: 261 GYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVT 320
           G F EP I+TG+  +  V   ETF P+  +F FD+ +E I   N+   GL++  +T++ +
Sbjct: 385 GLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGLAAYFYTENFS 444
Query: 321 NLFKW-----LGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQY 371
              +       G  G + GLI+  +          FGG K +G GRE      ++Y
Sbjct: 445 RAIRVSEALEYGMVGHNTGLISNEV--------APFGGVKQSGLGREGSKYGIEEY 492

>pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From Pisum Sativum (Psamadh2) Length = 503

Iteration: 1
 Score = 54.7 bits (130), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 15/126 (11%)
Query: 259 RPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKD 318
           + G+F+EPTI+T +  N ++   E F P++ V  F + +EAI   N+   GL +++ + D
Sbjct: 370 KKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLANDTVYGLGAAVISND 429
Query: 319 ------VTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYC 372
                 VT  FK         G++ VN  +        +GG K +G GRE G      Y 
Sbjct: 430 LERCERVTKAFK--------AGIVWVNC-SQPCFTQAPWGGVKRSGFGRELGEWGLDNYL 480
Query: 373 RRSTVT 378
               VT
Sbjct: 481 SVKQVT 486

>pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter Aquaeolei Length = 506

Iteration: 1
 Score = 54.7 bits (130), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 38/147 (25%), Positives = 58/147 (39%), Gaps = 2/147 (1%)
Query: 40  YDGTSWK--ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRXXXXXXXXXXXPRRG 97
           Y G  WK  A G      NP+TG  IA V     +D    +E+ +             R 
Sbjct: 15  YIGGRWKDSAGGATFDVYNPATGSVIAKVPSXPEEDVVAAVEAGQSALRLTNPWPIETRR 74
Query: 98  EIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPS 157
           + +  I D L+     +G+++  E GK   E  GEV       DY            +P 
Sbjct: 75  KWLEDIRDGLKENREEIGRILCXEHGKPWKEAQGEVDYAAGFFDYCAKHISALDSHTIPE 134
Query: 158 ERPGHVLLENWNPLGVVGIISAFNFPV 184
           +        ++ P+GV G+I  +NFP+
Sbjct: 135 KPKDCTWTVHYRPVGVTGLIVPWNFPI 161

>pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter Aquaeolei Length = 506

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 52/117 (44%), Gaps = 3/117 (2%)
Query: 261 GYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVT 320
           G F  PT+V G+         ETF P+V    F + +E I   N+ + GL+S +FT D  
Sbjct: 367 GLFFPPTVVQGVDREXCCYQEETFGPLVPXALFRTEEEVIDAGNDTEFGLASYVFTADAE 426
Query: 321 NLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTV 377
              +     G   G +  N  T G      FGG K +G GRE G +   ++    TV
Sbjct: 427 RAQRVAA--GLRFGHVGWNTGT-GPTPEAPFGGXKASGIGREGGLEGLFEFVEAQTV 480

>pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase Gapn From Methanocaldococcus Jannaschii Dsm 2661 Length = 486

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 89/463 (19%), Positives = 165/463 (35%), Gaps = 129/463 (27%)
Query: 48  NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRXXXXXXXXXXXPRRGEIVRQIGDAL 107
           N E +  INP + E I  +   + ++    I+++             +R  I+  I   +
Sbjct: 10  NREDMDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKEVMKNLPITKRYNILMNIAKQI 69
Query: 108 RHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYS---------------- 151
           + K   L ++++++ GK + +   EV+  I     A    + +                 
Sbjct: 70  KEKKEELAKILAIDAGKPIKQARVEVERSIGTFKLAAFYVKEHRDEVIPSDDRLIFTRRE 129
Query: 152 -----GSILPSERP--------------GHVLLENWN---PLGVVGI-------ISAFNF 182
                G+I P   P              G+V++ + +   PL  + +       +  +N 
Sbjct: 130 PVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCIELAKIIENALKKYNV 189
Query: 183 PVAVYGW--------------NAAIALVGVAVQSRFGKLL----------LELGGNNAII 218
           P+ VY                N  + ++     S+ G+L+          LELGG N  I
Sbjct: 190 PLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAGFKKIALELGGVNPNI 249
Query: 219 VNEDADLNLAQQCLVFACCGTAGQRCTTT-------------RRLFLHKKKI-------- 257
           V +DADLN A   L+      AGQ C +                +F++K K+        
Sbjct: 250 VLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNPLD 309
Query: 258 -----------------------------------DRPGYFVEPTIVTGLPHNSRVVHRE 282
                                               R      PTI+  +  ++ +   E
Sbjct: 310 EKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKRDKALFYPTILE-VDRDNILCKTE 368
Query: 283 TFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPT 342
           TFAP++ +   +  +E I   N  + GL S+IFT D+    K+   +  + G + +N  +
Sbjct: 369 TFAPVIPIIRTNE-EEMIDIANSTEYGLHSAIFTNDINKSLKF--AENLEFGGVVINDSS 425
Query: 343 NGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTINHGKEI 385
              +    FGG K +G GRE    + ++     T+ I+  + +
Sbjct: 426 LFRQDNMPFGGVKKSGLGREGVKYAMEEMSNIKTIIISKAENL 468

>pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus Hb8 Length = 515

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 66/139 (47%), Gaps = 9/139 (6%)
Query: 241 GQRCTTTRRLFLHKKKIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAI 300
           G+R  T+ R     + + R  Y + PT+  G  H  ++   E F P++   PF   +EA+
Sbjct: 374 GERAKTSFR----GEDLSRGNYLL-PTVFVGENH-MKIAQEEIFGPVLVAIPFKDEEEAL 427
Query: 301 TWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGG 360
              N+ K GL++ +FT+D+    +       + G++ +N   N   +   FGG K +G  
Sbjct: 428 RKANDTKYGLAAYVFTRDLERAHRLA--LELEAGMVYLN-SHNVRHLPTPFGGVKGSGDR 484
Query: 361 RESGSDSWKQYCRRSTVTI 379
           RE G+ +   Y    T+ +
Sbjct: 485 REGGTYALDFYTDLKTIAL 503

>pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Lactobacillus Acidophilus Length = 484

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/114 (33%), Positives = 56/114 (49%), Gaps = 3/114 (2%)
Query: 249 RLFLHKKKIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQ 308
           ++F    +ID  G F  PTI+T +  ++ V  +E F PI  VF  +  + AI   N+   
Sbjct: 329 KVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSY 388
Query: 309 GLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRE 362
           GL SS+   D+    K      +   +IN    T+G E+   FGG K +G GRE
Sbjct: 389 GLGSSVIGSDIDRAKKVSAQIETGXTVINGRWITSG-EL--PFGGIKKSGYGRE 439

>pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From Anabaena Variabilis. Length = 474

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 10/125 (8%)
Query: 261 GYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVT 320
           G++  PT+ T + H+ +V   ETF PI  V PF  ++EA+   N+   GLS+++F     
Sbjct: 343 GWWCRPTVXTNVNHSXKVXTEETFGPIXPVXPFPDVEEAVYLANDTIYGLSAAVFAGSED 402
Query: 321 NLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEK----YTG-GGRESGSDSWKQYCRRS 375
              K    +  + G I++N   + A       GEK    ++G GG   G+   K++ R+ 
Sbjct: 403 EALK--VARQLNAGAISIN---DAALTAXXHEGEKNAFNFSGLGGSRVGAAGLKRFLRKQ 457
Query: 376 TVTIN 380
              I 
Sbjct: 458 AFLIK 462

>pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Halodurans Length = 538

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 19/59 (32%), Positives = 38/59 (64%)
Query: 201 QSRFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKKKIDR 259
           Q+   ++++E+GG + ++V+ DADL+LA + ++ +  G +GQ+C+   R  +HK   D 
Sbjct: 278 QNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDE 336

>pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Halodurans Length = 538

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/109 (24%), Positives = 53/109 (48%), Gaps = 3/109 (2%)
Query: 261 GYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVT 320
           G+F++PTI+  L   + ++  E F P+V     +  D A+   N  + GL+ ++ T++  
Sbjct: 396 GFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKANDFDHALEIANNTEYGLTGAVITRNRA 455
Query: 321 NLFKWLGPQGSDCGLINVNIPTNGAEIG-GAFGGEKYTGGGRESGSDSW 368
           ++ +    +    G +  N    GA +G   FGG K +G   ++G   +
Sbjct: 456 HIEQ--AKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAGGPDY 502

>pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From Geobacter Sulfurreducens Pca Length = 1026

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 55/122 (45%), Gaps = 4/122 (3%)
Query: 261  GYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVT 320
            GYFV  TI+ G+    R+   E F P++ V      D+AI W N  +  L+  IF++   
Sbjct: 890  GYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFALTGGIFSRSPE 949
Query: 321  NLFKWLGPQGSDCGLINVNIPTNGAEIG-GAFGGEKYTG-GGRESGSDSWKQYCRRSTVT 378
            +L K    +    G + +N    GA +    FGG + +G G +  G D    +     VT
Sbjct: 950  HLAK--ARREFRVGNLYINRNNTGALVERQPFGGARMSGVGTKAGGPDYLLHFMDPRVVT 1007
Query: 379  IN 380
             N
Sbjct: 1008 EN 1009

>pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Sinorhizobium Meliloti Length = 528

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 70/147 (47%), Gaps = 8/147 (5%)
Query: 239 TAGQRCTTTRRLFLHKKKIDR-PGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLD 297
           TAG   T+   L L  ++I R  G +  PT+  G+  +  +   E F P++    F + D
Sbjct: 360 TAG--ITSGAELLLGGERIGREAGLYYAPTVFAGVTPDXSIAREEIFGPVLSTLTFKTAD 417
Query: 298 EAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGA-EIGGAFGGEKY 356
           EA+   N  + GLS+S+++ ++    + +  +    G   +N   +G  E+    GG K 
Sbjct: 418 EAVALANATEFGLSASVWSTNLETALQTI--RRIRAGRCWINSVIDGTPEL--PIGGYKK 473
Query: 357 TGGGRESGSDSWKQYCRRSTVTINHGK 383
           +G GRE G   + +Y +   V +  G+
Sbjct: 474 SGLGRELGRYGFDEYSQFKGVHVTLGR 500

>pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A Length = 475

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 200 VQSRFGKL------LLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLH 253
           +  R GK+      +LELGG ++ IV EDADL L  + ++    G +GQRCT  +R+ + 
Sbjct: 234 IGERIGKMAGMRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVM 293
Query: 254 KKKIDR 259
           +   D 
Sbjct: 294 ESVADE 299

>pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A Length = 475

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 2/105 (1%)
Query: 256 KIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIF 315
           +I R G  + P +   +  + R+   E F P++ +    S++EAI  +N+ + GL +SIF
Sbjct: 351 EIKREGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIF 410
Query: 316 TKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGG 360
           T D    F     +  + G +++N  T        F G K +G G
Sbjct: 411 TNDFPRAFGI--AEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAG 453

>pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From Streptococcus Mutans Length = 475

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 200 VQSRFGKL------LLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLH 253
           +  R GK+      +LELGG ++ IV EDADL L  + ++    G +GQRCT  +R+ + 
Sbjct: 234 IGERIGKMAGMRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVM 293
Query: 254 KKKIDR 259
           +   D 
Sbjct: 294 ESVADE 299

>pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From Streptococcus Mutans Length = 475

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 2/105 (1%)
Query: 256 KIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIF 315
           +I R G  + P +   +  + R+   E F P++ +    S++EAI  +N+ + GL +SIF
Sbjct: 351 EIKREGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIF 410
Query: 316 TKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGG 360
           T D    F     +  + G +++N  T        F G K +G G
Sbjct: 411 TNDFPRAFGI--AEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAG 453

>pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus Halodurans C-125 Length = 505

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 60/255 (23%), Positives = 96/255 (37%), Gaps = 69/255 (27%)
Query: 198 VAVQSRFGKLLLELGGNNAIIVNEDADLNLA-------------QQCL----VFACCGTA 240
           ++ +++   ++LELGG +  IV +DADL L              Q+C     VF     A
Sbjct: 247 ISEKAKMIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVA 306
Query: 241 GQRCTTTRRLF-----------------LHKKK-------ID--------------RPGY 262
            Q     + L                  + +K        ID              R G 
Sbjct: 307 DQLVANIKELVEQLTVGSPEDDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKRQGN 366
Query: 263 FVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKD---V 319
            + PT++  +    RV   E F P++ +      +EAI+ +N+   GL +SIFTKD    
Sbjct: 367 LLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIFTKDTDRA 426
Query: 320 TNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTI 379
            N+ K L     + G +++N  T        F G K +G G +    S     R     +
Sbjct: 427 INIGKHL-----EVGTVHINAKTERGPDHFPFLGVKKSGLGVQGIKPSLLSMTRERVTVL 481
Query: 380 NHGKEITLAQGIKFE 394
           N      LA+ + F+
Sbjct: 482 N------LAENLYFQ 490

>pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 6/66 (9%)
Query: 200 VQSRFGKL------LLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLH 253
           +  R GK+      +L LGG ++ IV EDADL L  + ++    G +GQRCT  +R+ + 
Sbjct: 234 IGERIGKMAGMRPIMLALGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVM 293
Query: 254 KKKIDR 259
           +   D 
Sbjct: 294 ESVADE 299

>pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 2/105 (1%)
Query: 256 KIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIF 315
           +I R G  + P +   +  + R+   E F P++ +    S++EAI  +N+ + GL +SIF
Sbjct: 351 EIKREGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIF 410
Query: 316 TKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGG 360
           T D    F     +  + G +++N  T        F G K +G G
Sbjct: 411 TNDFPRAFGI--AEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAG 453

>pdb|3JU8|A Chain A, Crystal Structure Of Succinylglutamic Semialdehyde Dehydrogenase From Pseudomonas Aeruginosa. Length = 490

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 35/58 (60%), Gaps = 5/58 (8%)
Query: 200 VQSRFGK-----LLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFL 252
           + S+FG      L LE GGNN ++V E ADL+ A   ++ +   +AGQRCT  RRL +
Sbjct: 233 LHSQFGGQPQKILALEXGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLV 290

>pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 6/66 (9%)
Query: 200 VQSRFGKL------LLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLH 253
           +  R GK+      +LELGG ++ IV EDADL L  + ++    G +GQR T  +R+ + 
Sbjct: 234 IGERIGKMAGMRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRSTAVKRVLVM 293
Query: 254 KKKIDR 259
           +   D 
Sbjct: 294 ESVADE 299

>pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 2/105 (1%)
Query: 256 KIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIF 315
           +I R G  + P +   +  + R+   E F P++ +    S++EAI  +N+ + GL +SIF
Sbjct: 351 EIKREGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIF 410
Query: 316 TKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGG 360
           T D    F     +  + G +++N  T        F G K +G G
Sbjct: 411 TNDFPRAFGI--AEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAG 453

>pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde Dehydrogenase From Corynebacterium Glutamicum Length = 508

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/124 (24%), Positives = 56/124 (45%), Gaps = 2/124 (1%)
Query: 261 GYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVT 320
           G  V P + + +  +  +   E F P++ V   D    A    N    GLS+++++KD+ 
Sbjct: 367 GRLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAELANASDFGLSAAVWSKDID 426
Query: 321 NLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTIN 380
              ++      D G++++N  T   E    FGG K +G GR +G  + +++     + I 
Sbjct: 427 RAAQFA--LQIDSGMVHINDLTVNDEPHVMFGGSKNSGLGRFNGDWAIEEFTTDRWIGIK 484
Query: 381 HGKE 384
              E
Sbjct: 485 RSAE 488

>pdb|3LV1|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ Length = 457

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 56/242 (23%), Positives = 90/242 (37%), Gaps = 72/242 (29%)
Query: 199 AVQSRFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLH----- 253
           A       ++LELGG   +IV  DADL+     L+F     +GQ C     L++H     
Sbjct: 225 AAAKHLTPVVLELGGKCPLIVLPDADLDQTVNQLMFGKFINSGQTCIAPDYLYVHYSVKD 284
Query: 254 -------------------------KKKIDRPGYFVEPT--------------------I 268
                                    ++++ R    +E T                    +
Sbjct: 285 ALLERLVERVKTELPEINSTGKLVTERQVQRLVSLLEATQGQVLVGSQADVSKRALSATV 344
Query: 269 VTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITW-NNEVKQGLSSSIFTKDVTNLFKWLG 327
           V G+  N  ++  E F PI+ V  FDS+  AI   N    + L+  +F KD+ ++ K   
Sbjct: 345 VDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDM-DVAK--- 400
Query: 328 PQGSDCGLINVNIPTNGAEIGGA----------FGGEKYTGGGRESGSDSWKQYCRRSTV 377
                 G+IN  I +  A++ G           FGG   +G G   G  S+  +  + +V
Sbjct: 401 ------GIIN-QIQSGDAQVNGVMLHAFSPYLPFGGIGASGMGEYHGHFSYLTFTHKKSV 453
Query: 378 TI 379
            I
Sbjct: 454 RI 455

>pdb|3V9H|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352a Length = 566

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 4/111 (3%)
Query: 258 DRPGYFVEPTIVTGLPHNSRVVHRETFAPI--VYVFPFDSLDEAITW-NNEVKQGLSSSI 314
           D  GYFVEP IV        ++  E F P+  VYV+P D   E +   ++    GL+ ++
Sbjct: 426 DSVGYFVEPCIVESKDPQEPIMKEEIFGPVLSVYVYPDDKYKETLQLVDSTTSYGLTGAV 485
Query: 315 FTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIG-GAFGGEKYTGGGRESG 364
           F++D   + +      +  G   +N  + G+ +G   FGG + +G   + G
Sbjct: 486 FSQDKDVVQEATKVLRNAAGNFYINDKSTGSIVGQQPFGGARASGTNDKPG 536

>pdb|3V9G|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Length = 566

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 4/111 (3%)
Query: 258 DRPGYFVEPTIVTGLPHNSRVVHRETFAPI--VYVFPFDSLDEAITW-NNEVKQGLSSSI 314
           D  GYFVEP IV        ++  E F P+  VYV+P D   E +   ++    GL+ ++
Sbjct: 426 DSVGYFVEPCIVESKDPQEPIMKEEIFGPVLSVYVYPDDKYKETLQLVDSTTSYGLTGAV 485
Query: 315 FTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIG-GAFGGEKYTGGGRESG 364
           F++D   + +      +  G   +N  + G+ +G   FGG + +G   + G
Sbjct: 486 FSQDKDVVQEATKVLRNAAGNFYINDKSTGSIVGQQPFGGARASGTNDKPG 536

>pdb|3V9I|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352l Length = 566

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 4/111 (3%)
Query: 258 DRPGYFVEPTIVTGLPHNSRVVHRETFAPI--VYVFPFDSLDEAITW-NNEVKQGLSSSI 314
           D  GYFVEP IV        ++  E F P+  VYV+P D   E +   ++    GL+ ++
Sbjct: 426 DSVGYFVEPCIVESKDPQEPIMKEEIFGPVLSVYVYPDDKYKETLQLVDSTTSYGLTGAV 485
Query: 315 FTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIG-GAFGGEKYTGGGRESG 364
           F++D   + +      +  G   +N  + G+ +G   FGG + +G   + G
Sbjct: 486 FSQDKDVVQEATKVLRNAAGNFYINDKSTGSIVGQQPFGGARASGTNDKPG 536

>pdb|1UXV|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 59/124 (47%), Gaps = 9/124 (7%)
Query: 263 FVEPTIVTGLPHNSR---VVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDV 319
           +V+PT+V       +   +  RE FAP+        LD+AI   N    GL +++F +DV
Sbjct: 373 YVQPTLVEAPADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDV 432
Query: 320 TNLFKWLGPQGSDCGLINVN-IPTNGAEIG-GAFGGEKYTGGGRESGSDSWKQYCRRSTV 377
             + + +  +  + G I +N +P +G  IG   FGG K +G  RE    + +      T+
Sbjct: 433 VKIRRAV--RLLEVGAIYINDMPRHG--IGYYPFGGRKKSGVFREGIGYAVEAVTAYKTI 488
Query: 378 TINH 381
             N+
Sbjct: 489 VFNY 492

>pdb|1AD3|A Chain A, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide- Adenine-Dinucleotide Length = 452

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/128 (22%), Positives = 61/128 (47%), Gaps = 11/128 (8%)
Query: 258 DRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTK 317
           D+   ++ PTI+  +   S V+  E F P++ +    SL+EAI + N+ ++ L+  +F+ 
Sbjct: 309 DQSSRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQFINQREKPLALYVFSN 368
Query: 318 DVTNLFKWLGPQGS-----DCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYC 372
           +   + K +    S     +  ++++ +PT        FGG   +G G   G  S++ + 
Sbjct: 369 NEKVIKKMIAETSSGGVTANDVIVHITVPT------LPFGGVGNSGMGAYHGKKSFETFS 422
Query: 373 RRSTVTIN 380
            R +  + 
Sbjct: 423 HRRSCLVK 430

>pdb|1KY8|A Chain A, Crystal Structure Of The Non-Phosphorylating Glyceraldehyde-3- Phosphate Dehydrogenase Length = 501

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 59/124 (47%), Gaps = 9/124 (7%)
Query: 263 FVEPTIVTGLPHNSR---VVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDV 319
           +V+PT+V       +   +  RE FAP+        LD+AI   N    GL +++F +DV
Sbjct: 373 YVQPTLVEAPADRVKDMVLYKREVFAPVASAVEVKDLDQAIELANGRPYGLDAAVFGRDV 432
Query: 320 TNLFKWLGPQGSDCGLINVN-IPTNGAEIG-GAFGGEKYTGGGRESGSDSWKQYCRRSTV 377
             + + +  +  + G I +N +P +G  IG   FGG K +G  RE    + +      T+
Sbjct: 433 VKIRRAV--RLLEVGAIYINDMPRHG--IGYYPFGGRKKSGVFREGIGYAVEAVTAYKTI 488
Query: 378 TINH 381
             N+
Sbjct: 489 VFNY 492

>pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh Length = 487

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 53/111 (47%), Gaps = 7/111 (6%)
Query: 263 FVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNL 322
           F EPT++  +  +    H ETF P+  V  FD+ +EAI   N    GL+   +++D   +
Sbjct: 371 FFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQI 430
Query: 323 FKWLGPQGSDCGLINVNIPTNG--AEIGGAFGGEKYTGGGRESGSDSWKQY 371
             W   +  + G++ VN    G  + +   FGG K +G GRE       +Y
Sbjct: 431 --WRVAEQLEVGMVGVN---EGLISSVECPFGGVKQSGLGREGSKYGIDEY 476

>pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 521

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/149 (22%), Positives = 61/149 (40%)
Query: 48  NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRXXXXXXXXXXXPRRGEIVRQIGDAL 107
           +G +    NP+TGE   +V   +  D    +ES++            RR  +  +    L
Sbjct: 40  SGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAAQPKWAATNPQRRARVFXKFVQLL 99
Query: 108 RHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLEN 167
                 L + +S E GK + +  G++   +++C++ +G+             PG      
Sbjct: 100 NDNXNELAEXLSREHGKTIDDAKGDIVRGLEVCEFVIGIPHLQKSEFTEGAGPGIDXYSI 159
Query: 168 WNPLGVVGIISAFNFPVAVYGWNAAIALV 196
             P+G+   I+ FNFP  +  W  A A+ 
Sbjct: 160 RQPVGIGAGITPFNFPGXIPXWXFAPAIA 188

>pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh Length = 487

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 53/111 (47%), Gaps = 7/111 (6%)
Query: 263 FVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNL 322
           F EPT++  +  +    H ETF P+  V  FD+ +EAI   N    GL+   +++D   +
Sbjct: 371 FFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQI 430
Query: 323 FKWLGPQGSDCGLINVNIPTNG--AEIGGAFGGEKYTGGGRESGSDSWKQY 371
             W   +  + G++ VN    G  + +   FGG K +G GRE       +Y
Sbjct: 431 --WRVAEQLEVGMVGVN---EGLISSVECPFGGVKQSGLGREGSKYGIDEY 476

>pdb|1UXN|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 58/124 (46%), Gaps = 9/124 (7%)
Query: 263 FVEPTIVTGLPHNSR---VVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDV 319
           +V+PT V       +   +  RE FAP+        LD+AI   N    GL +++F +DV
Sbjct: 373 YVQPTFVEAPADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDV 432
Query: 320 TNLFKWLGPQGSDCGLINVN-IPTNGAEIG-GAFGGEKYTGGGRESGSDSWKQYCRRSTV 377
             + + +  +  + G I +N +P +G  IG   FGG K +G  RE    + +      T+
Sbjct: 433 VKIRRAV--RLLEVGAIYINDMPRHG--IGYYPFGGRKKSGVFREGIGYAVEAVTAYKTI 488
Query: 378 TINH 381
             N+
Sbjct: 489 VFNY 492

>pdb|3SZA|A Chain A, Crystal Structure Of Human Aldh3a1 - Apo Form Length = 469

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/122 (23%), Positives = 59/122 (48%), Gaps = 1/122 (0%)
Query: 258 DRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTK 317
           D    ++ PTI+T +   S V+  E F P++ +    SL+EAI + N+ ++ L+  +F+ 
Sbjct: 326 DAATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSS 385
Query: 318 DVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTV 377
           +   + K +  + S  G+   ++  +       FGG   +G G   G  S++ +  R + 
Sbjct: 386 N-DKVIKKMIAETSSGGVAANDVIVHITLHSLPFGGVGNSGMGSYHGKKSFETFSHRRSC 444
Query: 378 TI 379
            +
Sbjct: 445 LV 446

>pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate Dehydrogenase Complexed With Sulfate Ion Length = 563

Iteration: 1
 Score = 41.2 bits (95), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 28/108 (25%), Positives = 51/108 (47%), Gaps = 4/108 (3%)
Query: 261 GYFVEPTIVTGLPHNSRVVHRETFAPI--VYVFPFDSLDEAITW-NNEVKQGLSSSIFTK 317
           GY+VEP I+        ++  E F P+  VYV+P D   E +   ++    GL+ ++F +
Sbjct: 426 GYYVEPCIIESKDPQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAVFAQ 485
Query: 318 DVTNLFKWLGPQGSDCGLINVNIPTNGAEIG-GAFGGEKYTGGGRESG 364
           D   + +      +  G   +N  + G+ +G   FGG + +G   + G
Sbjct: 486 DKAIVQEATRMLRNAAGNFYINDKSTGSVVGQQPFGGARASGTNDKPG 533

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	394
2j6l_A	500	Aldehyde dehydrogenase family 7 member A1; NAD, re	7e-87
2j6l_A	500	Aldehyde dehydrogenase family 7 member A1; NAD, re	1e-69
2j6l_A	500	Aldehyde dehydrogenase family 7 member A1; NAD, re	6e-25
4f9i_A	1026	Proline dehydrogenase/delta-1-pyrroline-5-carboxy	3e-35
4f9i_A	1026	Proline dehydrogenase/delta-1-pyrroline-5-carboxy	8e-25
1uzb_A	516	1-pyrroline-5-carboxylate dehydrogenase; oxidoredu	4e-35
1uzb_A	516	1-pyrroline-5-carboxylate dehydrogenase; oxidoredu	1e-23
1uzb_A	516	1-pyrroline-5-carboxylate dehydrogenase; oxidoredu	2e-12
3r64_A	508	NAD dependent benzaldehyde dehydrogenase; structur	1e-34
3r64_A	508	NAD dependent benzaldehyde dehydrogenase; structur	2e-25
3r64_A	508	NAD dependent benzaldehyde dehydrogenase; structur	9e-11
3qan_A	538	1-pyrroline-5-carboxylate dehydrogenase 1; proline	3e-34
3qan_A	538	1-pyrroline-5-carboxylate dehydrogenase 1; proline	6e-28
1euh_A	475	NADP dependent non phosphorylating glyceraldehyde-	6e-33
1euh_A	475	NADP dependent non phosphorylating glyceraldehyde-	8e-32
3prl_A	505	NADP-dependent glyceraldehyde-3-phosphate dehydro;	3e-32
3prl_A	505	NADP-dependent glyceraldehyde-3-phosphate dehydro;	8e-31
3ju8_A	490	Succinylglutamic semialdehyde dehydrogenase; alpha	4e-32
3ju8_A	490	Succinylglutamic semialdehyde dehydrogenase; alpha	2e-21
3ju8_A	490	Succinylglutamic semialdehyde dehydrogenase; alpha	3e-11
3haz_A	1001	Proline dehydrogenase; proline utilization A, PUTA	2e-29
3haz_A	1001	Proline dehydrogenase; proline utilization A, PUTA	3e-25
3pqa_A	486	Lactaldehyde dehydrogenase; structural genomics, p	8e-28
3pqa_A	486	Lactaldehyde dehydrogenase; structural genomics, p	6e-23
2imp_A	479	Lactaldehyde dehydrogenase; protein-lactate-NADH t	4e-27
2imp_A	479	Lactaldehyde dehydrogenase; protein-lactate-NADH t	3e-18
2imp_A	479	Lactaldehyde dehydrogenase; protein-lactate-NADH t	1e-05
4dng_A	485	Uncharacterized aldehyde dehydrogenase ALDY; struc	9e-27
4dng_A	485	Uncharacterized aldehyde dehydrogenase ALDY; struc	4e-21
4dng_A	485	Uncharacterized aldehyde dehydrogenase ALDY; struc	2e-08
1ez0_A	510	ALDH, aldehyde dehydrogenase; nucleotide binding d	2e-26
1ez0_A	510	ALDH, aldehyde dehydrogenase; nucleotide binding d	5e-17
1uxt_A	501	Glyceraldehyde-3-phosphate dehydrogenase (NADP+);	4e-26
1uxt_A	501	Glyceraldehyde-3-phosphate dehydrogenase (NADP+);	2e-17
1uxt_A	501	Glyceraldehyde-3-phosphate dehydrogenase (NADP+);	6e-10
2y53_A	534	Aldehyde dehydrogenase (BOX pathway); oxidoreducta	4e-26
2y53_A	534	Aldehyde dehydrogenase (BOX pathway); oxidoreducta	1e-14
2y53_A	534	Aldehyde dehydrogenase (BOX pathway); oxidoreducta	3e-09
3k2w_A	497	Betaine-aldehyde dehydrogenase; structural genomic	9e-25
3k2w_A	497	Betaine-aldehyde dehydrogenase; structural genomic	2e-16
3k2w_A	497	Betaine-aldehyde dehydrogenase; structural genomic	2e-05
1t90_A	486	MMSDH, probable methylmalonate-semialdehyde dehydr	2e-24
1t90_A	486	MMSDH, probable methylmalonate-semialdehyde dehydr	7e-07
2w8n_A	487	Succinate-semialdehyde dehydrogenase, mitochondria	2e-24
2w8n_A	487	Succinate-semialdehyde dehydrogenase, mitochondria	2e-16
2w8n_A	487	Succinate-semialdehyde dehydrogenase, mitochondria	2e-05
3ed6_A	520	Betaine aldehyde dehydrogenase; structural genomic	3e-24
3ed6_A	520	Betaine aldehyde dehydrogenase; structural genomic	9e-17
3ed6_A	520	Betaine aldehyde dehydrogenase; structural genomic	5e-08
1a4s_A	503	ALDH, betaine aldehyde dehydrogenase; oxidoreducta	4e-24
1a4s_A	503	ALDH, betaine aldehyde dehydrogenase; oxidoreducta	2e-16
1a4s_A	503	ALDH, betaine aldehyde dehydrogenase; oxidoreducta	4e-07
2ve5_A	490	BADH, betaine aldehyde dehydrogenase; aldehyde oxi	8e-24
2ve5_A	490	BADH, betaine aldehyde dehydrogenase; aldehyde oxi	1e-15
2ve5_A	490	BADH, betaine aldehyde dehydrogenase; aldehyde oxi	7e-07
3ros_A	484	NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-	8e-24
3ros_A	484	NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-	1e-16
3ros_A	484	NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-	9e-08
3ek1_A	504	Aldehyde dehydrogenase; ssgcid, oxidoreductase, st	1e-23
3ek1_A	504	Aldehyde dehydrogenase; ssgcid, oxidoreductase, st	1e-19
3jz4_A	481	Succinate-semialdehyde dehydrogenase [NADP+]; tetr	1e-23
3jz4_A	481	Succinate-semialdehyde dehydrogenase [NADP+]; tetr	1e-16
3jz4_A	481	Succinate-semialdehyde dehydrogenase [NADP+]; tetr	2e-05
3rh9_A	506	Succinate-semialdehyde dehydrogenase (NAD(P)(+));	1e-23
3rh9_A	506	Succinate-semialdehyde dehydrogenase (NAD(P)(+));	1e-15
3rh9_A	506	Succinate-semialdehyde dehydrogenase (NAD(P)(+));	2e-05
3ifg_A	484	Succinate-semialdehyde dehydrogenase (NADP+); niai	2e-23
3ifg_A	484	Succinate-semialdehyde dehydrogenase (NADP+); niai	1e-16
3ifg_A	484	Succinate-semialdehyde dehydrogenase (NADP+); niai	2e-05
1wnd_A	495	Putative betaine aldehyde dehydrogenase; NADH, flu	2e-23
1wnd_A	495	Putative betaine aldehyde dehydrogenase; NADH, flu	1e-21
3etf_A	462	Putative succinate-semialdehyde dehydrogenase; cen	3e-23
3etf_A	462	Putative succinate-semialdehyde dehydrogenase; cen	4e-17
3etf_A	462	Putative succinate-semialdehyde dehydrogenase; cen	2e-07
3b4w_A	495	Aldehyde dehydrogenase; RV0223C-NAD complex, struc	3e-23
3b4w_A	495	Aldehyde dehydrogenase; RV0223C-NAD complex, struc	7e-14
3b4w_A	495	Aldehyde dehydrogenase; RV0223C-NAD complex, struc	7e-08
4e4g_A	521	Methylmalonate-semialdehyde dehydrogenase; structu	5e-23
4e4g_A	521	Methylmalonate-semialdehyde dehydrogenase; structu	3e-06
3r31_A	517	BADH, betaine aldehyde dehydrogenase; structural g	1e-22
3r31_A	517	BADH, betaine aldehyde dehydrogenase; structural g	1e-16
3r31_A	517	BADH, betaine aldehyde dehydrogenase; structural g	5e-07
3i44_A	497	Aldehyde dehydrogenase; oxidoreductase, structural	2e-22
3i44_A	497	Aldehyde dehydrogenase; oxidoreductase, structural	8e-13
3i44_A	497	Aldehyde dehydrogenase; oxidoreductase, structural	5e-06
3v4c_A	528	Aldehyde dehydrogenase (NADP+); structural genomic	3e-22
3v4c_A	528	Aldehyde dehydrogenase (NADP+); structural genomic	2e-15
2d4e_A	515	5-carboxymethyl-2-hydroxymuconate semialdehyde deh	4e-22
2d4e_A	515	5-carboxymethyl-2-hydroxymuconate semialdehyde deh	2e-17
2d4e_A	515	5-carboxymethyl-2-hydroxymuconate semialdehyde deh	3e-07
4f3x_A	498	Putative aldehyde dehydrogenase; structural genomi	4e-22
4f3x_A	498	Putative aldehyde dehydrogenase; structural genomi	1e-21
4f3x_A	498	Putative aldehyde dehydrogenase; structural genomi	6e-07
3iwj_A	503	Putative aminoaldehyde dehydrogenase; rossmann fol	4e-22
3iwj_A	503	Putative aminoaldehyde dehydrogenase; rossmann fol	8e-17
3iwj_A	503	Putative aminoaldehyde dehydrogenase; rossmann fol	4e-08
3u4j_A	528	NAD-dependent aldehyde dehydrogenase; PSI-biology,	5e-22
3u4j_A	528	NAD-dependent aldehyde dehydrogenase; PSI-biology,	1e-16
3u4j_A	528	NAD-dependent aldehyde dehydrogenase; PSI-biology,	7e-07
3ty7_A	478	Putative aldehyde dehydrogenase SAV2122; structura	2e-21
3ty7_A	478	Putative aldehyde dehydrogenase SAV2122; structura	1e-12
3ty7_A	478	Putative aldehyde dehydrogenase SAV2122; structura	5e-07
1bxs_A	501	Aldehyde dehydrogenase; retinal, class 1, tetramer	3e-21
1bxs_A	501	Aldehyde dehydrogenase; retinal, class 1, tetramer	4e-18
1o04_A	500	Aldehyde dehydrogenase, mitochondrial precursor; A	6e-21
1o04_A	500	Aldehyde dehydrogenase, mitochondrial precursor; A	1e-17
3k9d_A	464	LMO1179 protein, aldehyde dehydrogenase; structura	2e-20
3k9d_A	464	LMO1179 protein, aldehyde dehydrogenase; structura	2e-15
3my7_A	452	Alcohol dehydrogenase/acetaldehyde dehydrogenase;	6e-20
3my7_A	452	Alcohol dehydrogenase/acetaldehyde dehydrogenase;	5e-16
2o2p_A	517	Formyltetrahydrofolate dehydrogenase; aldehyde deh	8e-20
2o2p_A	517	Formyltetrahydrofolate dehydrogenase; aldehyde deh	9e-17
2o2p_A	517	Formyltetrahydrofolate dehydrogenase; aldehyde deh	9e-07
4e3x_A	563	Delta-1-pyrroline-5-carboxylate dehydrogenase, mit	7e-16
4e3x_A	563	Delta-1-pyrroline-5-carboxylate dehydrogenase, mit	5e-10
3sza_A	469	Aldehyde dehydrogenase, dimeric NADP-preferring; A	7e-10
3lns_A	457	Benzaldehyde dehydrogenase; oxidoreductase, NADP+,	4e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-06

>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* Length = 500

 Score =  271 bits (695), Expect = 7e-87
 Identities = 111/182 (60%), Positives = 137/182 (75%), Gaps = 2/182 (1%)

Query: 15  SYSDSVSKYPFLKELGLSGSVNPGVYDGTSWKANGEIIPSINPSTGETIASVQQGNVQDY 74
           +   +  +Y +LKELGL    N GVY+G SW   GE+I +  P+  E IA V+Q +V DY
Sbjct: 4   TLLINQPQYAWLKELGLR-EENEGVYNG-SWGGRGEVITTYCPANNEPIARVRQASVADY 61

Query: 75  HRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQ 134
              ++ +R A+  WA +PAP+RGEIVRQIGDALR K+  LG LVSLEMGKIL EG+GEVQ
Sbjct: 62  EETVKKAREAWKIWADIPAPKRGEIVRQIGDALREKIQVLGSLVSLEMGKILVEGVGEVQ 121

Query: 135 EFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIA 194
           E++DICDYAVGLSR   G ILPSER GH L+E WNP+G+VGII+AFNFPVAVYGWN AIA
Sbjct: 122 EYVDICDYAVGLSRMIGGPILPSERSGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIA 181

Query: 195 LV 196
           ++
Sbjct: 182 MI 183

>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* Length = 500

 Score =  226 bits (579), Expect = 1e-69
 Identities = 93/127 (73%), Positives = 111/127 (87%)

Query: 255 KKIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSI 314
           K +DRPG +VEPTIVTGL H++ + H ETFAPI+YVF F + +E   WNNEVKQGLSSSI
Sbjct: 373 KVMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSI 432

Query: 315 FTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRR 374
           FTKD+  +F+WLGP+GSDCG++NVNIPT+GAEIGGAFGGEK+TGGGRESGSD+WKQY RR
Sbjct: 433 FTKDLGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDAWKQYMRR 492

Query: 375 STVTINH 381
           ST TIN+
Sbjct: 493 STCTINY 499

>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* Length = 500

 Score =  105 bits (264), Expect = 6e-25
 Identities = 42/71 (59%), Positives = 48/71 (67%), Gaps = 3/71 (4%)

Query: 195 LVGVAVQSRFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHK 254
            VG+ VQ RFG+ LLELGGNNAII  EDADL+L     +FA  GTAGQRCTT RRLF+H+
Sbjct: 254 QVGLMVQERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHE 313

Query: 255 KKIDRPGYFVE 265
              D     V 
Sbjct: 314 SIHDE---VVN 321

>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} Length = 1026

 Score =  137 bits (346), Expect = 3e-35
 Identities = 39/156 (25%), Positives = 67/156 (42%), Gaps = 1/156 (0%)

Query: 42  GTSWKANGEIIPSINPS-TGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIV 100
                   ++IP++NP+   E +  + Q    +    I +++AA+ AW       R E +
Sbjct: 537 NGKEVRTNDLIPTVNPNKPSEVLGQICQAGTTEVGDAIAAAKAAFPAWRDTDPRTRAEYL 596

Query: 101 RQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERP 160
            +   A R +L  L     LE+GK   +   +V E ID  +Y                 P
Sbjct: 597 LKAAQAARKRLFELSAWQVLEIGKQWDQAYADVTEAIDFLEYYAREMIRLGQPQRVGHAP 656

Query: 161 GHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALV 196
           G +    + P GV  +I+ +NFP+A+    A+ A+V
Sbjct: 657 GELNHYFYEPKGVAAVIAPWNFPLAISMGMASAAIV 692

>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} Length = 1026

 Score =  105 bits (265), Expect = 8e-25
 Identities = 49/250 (19%), Positives = 88/250 (35%), Gaps = 67/250 (26%)

Query: 201  QSRFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKKKIDR- 259
            Q+   K++ E+GG NAII+++DADL+ A   ++++  G  GQ+C+   R+ +     D+ 
Sbjct: 772  QANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYDKF 831

Query: 260  ------------------PGYFVEPTI-----------VTGLPHNSRVVHRET------- 283
                              P  ++                        V++          
Sbjct: 832  IERLVSMAKATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKREGHVLYESPVPAGEGY 891

Query: 284  -FAP--------------------IVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNL 322
                                    ++ V      D+AI W N  +  L+  IF++   +L
Sbjct: 892  FVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFALTGGIFSRSPEHL 951

Query: 323  FKWLGPQGSDCGLINVNIPTNGAEIGGA-FGGEKYTGGG-RESGSDSWKQYCRRSTVTIN 380
             K    +    G + +N    GA +    FGG + +G G +  G D    +     VT N
Sbjct: 952  AKAR--REFRVGNLYINRNNTGALVERQPFGGARMSGVGTKAGGPDYLLHFMDPRVVTEN 1009

Query: 381  HGKEITLAQG 390
                 T+ +G
Sbjct: 1010 -----TMRRG 1014

>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* Length = 516

 Score =  134 bits (339), Expect = 4e-35
 Identities = 35/154 (22%), Positives = 63/154 (40%), Gaps = 2/154 (1%)

Query: 45  WKANGEIIPSINPS-TGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQI 103
           W    E + S+NPS   E + +  +    +    +E++  A+  W   P   R  ++ + 
Sbjct: 46  WVDTKERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDRSRLLLKA 105

Query: 104 GDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPS-ERPGH 162
              +R +   L   +  E+GK   E   +V E ID  +Y    +  Y    +     PG 
Sbjct: 106 AALMRRRKRELEATLVYEVGKNWVEASADVAEAIDFIEYYARAALRYRYPAVEVVPYPGE 165

Query: 163 VLLENWNPLGVVGIISAFNFPVAVYGWNAAIALV 196
                + PLG   +I+ +NFPVA++       + 
Sbjct: 166 DNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVA 199

>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* Length = 516

 Score =  101 bits (254), Expect = 1e-23
 Identities = 32/128 (25%), Positives = 59/128 (46%), Gaps = 4/128 (3%)

Query: 255 KKIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSI 314
           K+++  GYF+ PT+ T +P  +R+   E F P++ V       EA+   N+   GL+  +
Sbjct: 390 KRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGV 449

Query: 315 FTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGA-FGGEKYTGGGRESGS-DSWKQYC 372
           +++   +L      +    G +  N    GA +G   FGG K +G   ++G+ D  + + 
Sbjct: 450 YSRKREHLEWAR--REFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFL 507

Query: 373 RRSTVTIN 380
               V   
Sbjct: 508 EMKAVAER 515

>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* Length = 516

 Score = 67.2 bits (165), Expect = 2e-12
 Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 3/65 (4%)

Query: 201 QSRFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKKKIDRP 260
           Q+ F +  +E GG NAIIV+E AD +LA + +V +  G  GQ+C+   RL L +   +  
Sbjct: 279 QTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEP- 337

Query: 261 GYFVE 265
              +E
Sbjct: 338 --VLE 340

>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} Length = 508

 Score =  132 bits (335), Expect = 1e-34
 Identities = 41/149 (27%), Positives = 65/149 (43%)

Query: 47  ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDA 106
            +  I  +INP     IA  +Q ++ D     E+++ A A WAA PA  R  I+ +  + 
Sbjct: 25  NSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQAEWAATPAAERSAIIYRAAEL 84

Query: 107 LRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLE 166
           L      + + +  E G   ++   E+    +I   +        G I PS  PG     
Sbjct: 85  LEEHREEIVEWLIKESGSTRSKANLEITLAGNITKESASFPGRVHGRISPSNTPGKENRV 144

Query: 167 NWNPLGVVGIISAFNFPVAVYGWNAAIAL 195
                GVVG+IS +NFP+ +   + A AL
Sbjct: 145 YRVAKGVVGVISPWNFPLNLSIRSVAPAL 173

>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} Length = 508

 Score =  106 bits (267), Expect = 2e-25
 Identities = 29/125 (23%), Positives = 55/125 (44%), Gaps = 2/125 (1%)

Query: 258 DRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTK 317
              G  V P + + +  +  +   E F P++ V   D    A    N    GLS+++++K
Sbjct: 364 PIEGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAELANASDFGLSAAVWSK 423

Query: 318 DVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTV 377
           D+    ++      D G++++N  T   E    FGG K +G GR +G  + +++     +
Sbjct: 424 DIDRAAQF--ALQIDSGMVHINDLTVNDEPHVMFGGSKNSGLGRFNGDWAIEEFTTDRWI 481

Query: 378 TINHG 382
            I   
Sbjct: 482 GIKRS 486

>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} Length = 508

 Score = 62.2 bits (152), Expect = 9e-11
 Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 3/60 (5%)

Query: 206 KLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKKKIDRPGYFVE 265
            + LELGGN   +V  DAD++ A Q          GQ C +  R+ +     D    F+E
Sbjct: 256 TVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDE---FLE 312

>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A Length = 538

 Score =  132 bits (334), Expect = 3e-34
 Identities = 35/153 (22%), Positives = 59/153 (38%), Gaps = 1/153 (0%)

Query: 45  WKANGEIIPSINPS-TGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQI 103
                + I S NP+   + + SV + N     + I+S+  A+  W  +    R  I+ + 
Sbjct: 46  RVTTEDKIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAFQTWRNVNPEERANILVKA 105

Query: 104 GDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHV 163
              +R +       +  E GK   E   +  E ID  +Y        +       RPG  
Sbjct: 106 AAIIRRRKHEFSAWLVHEAGKPWKEADADTAEAIDFLEYYARQMIELNRGKEILSRPGEQ 165

Query: 164 LLENWNPLGVVGIISAFNFPVAVYGWNAAIALV 196
               + P+GV   IS +NF +A+    A   +V
Sbjct: 166 NRYFYTPMGVTVTISPWNFALAIMVGTAVAPIV 198

>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A Length = 538

 Score =  114 bits (287), Expect = 6e-28
 Identities = 49/254 (19%), Positives = 98/254 (38%), Gaps = 62/254 (24%)

Query: 194 ALVGVAVQSRFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLH 253
           A V    Q+   ++++E+GG + ++V+ DADL+LA + ++ +  G +GQ+C+   R  +H
Sbjct: 271 AAVVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIH 330

Query: 254 KKKIDR-------------------PGYFV---------------------EPTIVTG-- 271
           K   D                       ++                     E  ++TG  
Sbjct: 331 KDVYDEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEGRLMTGGE 390

Query: 272 ----------------LPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIF 315
                           L   + ++  E F P+V     +  D A+   N  + GL+ ++ 
Sbjct: 391 GDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKANDFDHALEIANNTEYGLTGAVI 450

Query: 316 TKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGA-FGGEKYTG-GGRESGSDSWKQYCR 373
           T++  ++ +    +    G +  N    GA +G   FGG K +G   +  G D    + +
Sbjct: 451 TRNRAHIEQAK--REFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAGGPDYLALHMQ 508

Query: 374 RSTVTINHGKEITL 387
             TV+  + + +  
Sbjct: 509 AKTVSEMYAENLYF 522

>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* Length = 475

 Score =  127 bits (322), Expect = 6e-33
 Identities = 51/230 (22%), Positives = 88/230 (38%), Gaps = 57/230 (24%)

Query: 206 KLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRL---------FLHK-- 254
            ++LELGG ++ IV EDADL L  + ++    G +GQRCT  +R+          + K  
Sbjct: 246 PIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIR 305

Query: 255 --------------------------KKID------------------RPGYFVEPTIVT 270
                                       ++                  R G  + P +  
Sbjct: 306 EKVLALTIGNPEDDADITPLIDTKSADYVEGLINDANDKGATALTEIKREGNLICPILFD 365

Query: 271 GLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQG 330
            +  + R+   E F P++ +    S++EAI  +N+ + GL +SIFT D    F     + 
Sbjct: 366 KVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFG--IAEQ 423

Query: 331 SDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTIN 380
            + G +++N  T        F G K +G G +    S +      +V  +
Sbjct: 424 LEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVFD 473

>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* Length = 475

 Score =  124 bits (314), Expect = 8e-32
 Identities = 40/157 (25%), Positives = 68/157 (43%), Gaps = 5/157 (3%)

Query: 45  WKANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIG 104
           WK +   I    P++G  + SV   + ++      S++ A  AW AL    R   + ++ 
Sbjct: 13  WKLSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVA 72

Query: 105 DALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILP-----SER 159
           D L      +G ++S E+ K     + EV    +I +YA        G +L      +  
Sbjct: 73  DILMRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAAS 132

Query: 160 PGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALV 196
              + +    P+G+V  IS FN+PV + G   A AL+
Sbjct: 133 KKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALI 169

>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* Length = 505

 Score =  126 bits (318), Expect = 3e-32
 Identities = 52/240 (21%), Positives = 86/240 (35%), Gaps = 57/240 (23%)

Query: 201 QSRFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRL---------F 251
           +++   ++LELGG +  IV +DADL L    +V      +GQRCT  +R+          
Sbjct: 250 KAKMIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQL 309

Query: 252 LHK----------------------------KKID------------------RPGYFVE 265
           +                                I                   R G  + 
Sbjct: 310 VANIKELVEQLTVGSPEDDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKRQGNLLS 369

Query: 266 PTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKW 325
           PT++  +    RV   E F P++ +      +EAI+ +N+   GL +SIFTKD       
Sbjct: 370 PTLLDDVTPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIFTKDTDRAIN- 428

Query: 326 LGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTINHGKEI 385
              +  + G +++N  T        F G K +G G +    S     R     +N  + +
Sbjct: 429 -IGKHLEVGTVHINAKTERGPDHFPFLGVKKSGLGVQGIKPSLLSMTRERVTVLNLAENL 487

>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* Length = 505

 Score =  122 bits (308), Expect = 8e-31
 Identities = 41/158 (25%), Positives = 68/158 (43%), Gaps = 7/158 (4%)

Query: 45  WK--ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQ 102
           W     GE I    P++G  + S+   + ++ +  I+ ++ A   W   P   R +++  
Sbjct: 20  WVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQKIWKIRPIHERVDLLYA 79

Query: 103 IGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSER--- 159
             D L  +   +G+L+  E+ K     IGEV    DI  +    +   +G  L  ++   
Sbjct: 80  WADLLEERKEIIGELIMHEVAKPKKSAIGEVSRTADIIRHTADEALRLNGETLKGDQFKG 139

Query: 160 --PGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL 195
                + L    PLGVV  IS FN+PV +     A AL
Sbjct: 140 GSSKKIALVEREPLGVVLAISPFNYPVNLAAAKIAPAL 177

>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} Length = 490

 Score =  125 bits (317), Expect = 4e-32
 Identities = 35/149 (23%), Positives = 64/149 (42%), Gaps = 1/149 (0%)

Query: 47  ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDA 106
             GE + S++P     + S +  +       + ++R A+ AWA  P  +R E++ +    
Sbjct: 17  GQGETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFPAWARRPLEQRIELLERFAAT 76

Query: 107 LRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLE 166
           L+ +   L +++  E GK L E   EV   ++    +V   R  +G           +L 
Sbjct: 77  LKSRADELARVIGEETGKPLWESATEVTSMVNKVAISVQAFRERTGEKSGPLADATAVLR 136

Query: 167 NWNPLGVVGIISAFNFPVAVYGWNAAIAL 195
           +  P GVV +   +NFP  +   +   AL
Sbjct: 137 H-KPHGVVAVFGPYNFPGHLPNGHIVPAL 164

>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} Length = 490

 Score = 94.5 bits (236), Expect = 2e-21
 Identities = 25/116 (21%), Positives = 44/116 (37%), Gaps = 3/116 (2%)

Query: 249 RLFLHKKKIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQ 308
           +  L   +       + P I+  +   +     E F P++ V  +     AI   N  + 
Sbjct: 348 QPLLAMTQPIDGAALLTPGILD-VSAVAERPDEEFFGPLLQVIRYSDFAAAIREANATQY 406

Query: 309 GLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESG 364
           GL++ + +       ++L    S  G++N N    GA     FGG   +G  R S 
Sbjct: 407 GLAAGLLSDSRERFEQFL--VESRAGIVNWNKQLTGAASSAPFGGIGASGNHRPSA 460

>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} Length = 490

 Score = 63.7 bits (156), Expect = 3e-11
 Identities = 22/49 (44%), Positives = 32/49 (65%)

Query: 206 KLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHK 254
            L LE+GGNN ++V E ADL+ A   ++ +   +AGQRCT  RRL + +
Sbjct: 244 ILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQ 292

>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} Length = 1001

 Score =  119 bits (300), Expect = 2e-29
 Identities = 53/245 (21%), Positives = 84/245 (34%), Gaps = 69/245 (28%)

Query: 206 KLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLH------------ 253
            L+ E GG NA+I +  A        +V +   +AGQRC+  R LF+             
Sbjct: 756 PLIAETGGINAMIADATALPEQVADDVVTSAFRSAGQRCSALRLLFVQEDVADRMIEMVA 815

Query: 254 --------------------------KKKIDR------------------PGYFVEPTIV 269
                                     K+++D                    G FV P I 
Sbjct: 816 GAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEARLHFAGPAPEGCFVAPHIF 875

Query: 270 TGLPHNSRVVHRETFAPIVYV--FPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLG 327
                    +  E F PI++V  +  ++L+  +        GL+  + ++   ++   + 
Sbjct: 876 ELTEA--GQLTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAII- 932

Query: 328 PQGSDCGLINVNIPTNGAEIGGA-FGGEKYTG-GGRESGSDSWKQYCRRSTVTINHGKEI 385
                 G I VN    GA +G   FGG   +G G +  G     ++    TVTIN     
Sbjct: 933 -DRVQVGNIYVNRNMIGAVVGVQPFGGNGLSGTGPKAGGPHYLARFATEQTVTIN----- 986

Query: 386 TLAQG 390
           T A G
Sbjct: 987 TAAAG 991

>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} Length = 1001

 Score =  107 bits (268), Expect = 3e-25
 Identities = 35/154 (22%), Positives = 59/154 (38%), Gaps = 1/154 (0%)

Query: 44  SWKANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQI 103
             +   + + +   +    +  +        H  + ++RA +A W+  PA  R   + Q 
Sbjct: 522 GARTALDQLLTDVKAETGDLKPIADATPDQAHAAVAAARAGFAGWSRTPAGIRAAALEQA 581

Query: 104 GDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERP-GH 162
              L  +      L+  E GK L + + E++E  D C Y     R   GS      P G 
Sbjct: 582 AHLLESRSAHFIALLQREGGKTLDDALSELREAADFCRYYAAQGRKLFGSETAMPGPTGE 641

Query: 163 VLLENWNPLGVVGIISAFNFPVAVYGWNAAIALV 196
                    GV   IS +NFP+A++      AL+
Sbjct: 642 SNALTMRGRGVFVAISPWNFPLAIFLGQVTAALM 675

>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* Length = 486

 Score =  113 bits (285), Expect = 8e-28
 Identities = 34/148 (22%), Positives = 68/148 (45%), Gaps = 2/148 (1%)

Query: 48  NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDAL 107
           N E +  INP + E I  +   + ++    I+++         LP  +R  I+  I   +
Sbjct: 10  NREDMDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKEVMKNLPITKRYNILMNIAKQI 69

Query: 108 RHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLEN 167
           + K   L ++++++ GK + +   EV+  I     A    + +   ++PS     ++   
Sbjct: 70  KEKKEELAKILAIDAGKPIKQARVEVERSIGTFKLAAFYVKEHRDEVIPS--DDRLIFTR 127

Query: 168 WNPLGVVGIISAFNFPVAVYGWNAAIAL 195
             P+G+VG I+ FNFP+ +     A A+
Sbjct: 128 REPVGIVGAITPFNFPLNLSAHKIAPAI 155

>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* Length = 486

 Score = 99.2 bits (248), Expect = 6e-23
 Identities = 53/236 (22%), Positives = 90/236 (38%), Gaps = 60/236 (25%)

Query: 206 KLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRL---------FLHK-- 254
           K+ LELGG N  IV +DADLN A   L+      AGQ C +   +         F+    
Sbjct: 237 KIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFV 296

Query: 255 ---------------------------KKID------------------RPGYFVEPTIV 269
                                      + ++                  R      PTI+
Sbjct: 297 NKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKRDKALFYPTIL 356

Query: 270 TGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQ 329
             +  ++ +   ETFAP++ +   +  +E I   N  + GL S+IFT D+    K+   +
Sbjct: 357 E-VDRDNILCKTETFAPVIPIIRTNE-EEMIDIANSTEYGLHSAIFTNDINKSLKF--AE 412

Query: 330 GSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTINHGKEI 385
             + G + +N  +   +    FGG K +G GRE    + ++     T+ I+  + +
Sbjct: 413 NLEFGGVVINDSSLFRQDNMPFGGVKKSGLGREGVKYAMEEMSNIKTIIISKAENL 468

>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* Length = 479

 Score =  111 bits (280), Expect = 4e-27
 Identities = 46/152 (30%), Positives = 68/152 (44%), Gaps = 6/152 (3%)

Query: 47  ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDA 106
                I  +NP+T   I+ +  G  +D  + I+++  A   W ALPA  R   +R+I   
Sbjct: 19  RGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPEWEALPAIERASWLRKISAG 78

Query: 107 LRHKLVPLGQLVSLEMGKILAEGIGEVQ---EFIDICDYAVGLSRTYSGSILPSERPGHV 163
           +R +   +  L+  E GKI      EV    ++ID    A    R   G I+ S+RPG  
Sbjct: 79  IRERASEISALIVEEGGKIQQLAEVEVAFTADYIDY--MAEWARRYE-GEIIQSDRPGEN 135

Query: 164 LLENWNPLGVVGIISAFNFPVAVYGWNAAIAL 195
           +L     LGV   I  +NFP  +     A AL
Sbjct: 136 ILLFKRALGVTTGILPWNFPFFLIARKMAPAL 167

>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* Length = 479

 Score = 85.3 bits (212), Expect = 3e-18
 Identities = 32/112 (28%), Positives = 57/112 (50%), Gaps = 7/112 (6%)

Query: 255 KKIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSI 314
           K ++  GY+  PT++  +     ++H ETF P++ V  FD+L++AI+  N+   GL+SSI
Sbjct: 356 KAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSI 415

Query: 315 FTKDVTNLFKWLGPQGSDCGLINVN--IPTNGAEIGGAFGGEKYTGGGRESG 364
           +T+++    K +  +G   G   +N           G   G + +G G   G
Sbjct: 416 YTQNLNVAMKAI--KGLKFGETYINRENFEAMQ---GFHAGWRKSGIGGADG 462

>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* Length = 479

 Score = 46.0 bits (110), Expect = 1e-05
 Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 3/60 (5%)

Query: 206 KLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKKKIDRPGYFVE 265
           K+ LELGG    IV +DADL LA + +V +    +GQ C    R+++ K   D+   FV 
Sbjct: 247 KVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQ---FVN 303

>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} Length = 485

 Score =  110 bits (277), Expect = 9e-27
 Identities = 31/150 (20%), Positives = 59/150 (39%), Gaps = 1/150 (0%)

Query: 47  ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDA 106
            +G     +NP     I +      +      + ++ A   WA      R  ++++    
Sbjct: 19  ESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQKEWAKSTTEDRKAVLQKARGY 78

Query: 107 LRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGL-SRTYSGSILPSERPGHVLL 165
           L      +  +++ E G  + +   E+++ I I D A+           +PS+  G    
Sbjct: 79  LHENRDDIIMMIARETGGTIIKSTIELEQTIAILDEAMTYTGELGGVKEVPSDIEGKTNK 138

Query: 166 ENWNPLGVVGIISAFNFPVAVYGWNAAIAL 195
               PLGV+  IS FNFP+ +   + A A+
Sbjct: 139 IYRLPLGVISSISPFNFPMNLSMRSIAPAI 168

>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} Length = 485

 Score = 93.8 bits (234), Expect = 4e-21
 Identities = 37/125 (29%), Positives = 58/125 (46%), Gaps = 2/125 (1%)

Query: 259 RPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKD 318
           R G  + P +  G  +NS++   E FAPI  +    S  EAI   N+ + GLSS++FT D
Sbjct: 358 RVGNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFTSD 417

Query: 319 VTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVT 378
           +    K+      D G+ +VN  +       AFGG K +G GR       +++     ++
Sbjct: 418 LEKGEKF--ALQIDSGMTHVNDQSVNDSPNIAFGGNKASGVGRFGNPWVVEEFTVTKWIS 475

Query: 379 INHGK 383
           I    
Sbjct: 476 IQKQY 480

>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} Length = 485

 Score = 54.9 bits (133), Expect = 2e-08
 Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 3/60 (5%)

Query: 206 KLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKKKIDRPGYFVE 265
           ++ LELGGNN   V  DAD++ A    +F      GQ C    R+ +H+   D    FVE
Sbjct: 249 RMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDE---FVE 305

>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* Length = 510

 Score =  109 bits (274), Expect = 2e-26
 Identities = 27/160 (16%), Positives = 51/160 (31%), Gaps = 11/160 (6%)

Query: 47  ANGEIIPSINPSTGETIA-SVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGD 105
               +  + N  TGE +  +       + ++   ++      +  L   +R  ++R I  
Sbjct: 4   QTDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIAS 63

Query: 106 ALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGS--------ILPS 157
            L  +   +     LE         GE+    +       +  + S             +
Sbjct: 64  ELEARSDDIIARAHLETALPEVRLTGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRA 123

Query: 158 ERPGHVLLENWNPLGVVGIISAFNFPVA--VYGWNAAIAL 195
             P   +      LG V +  A NFP+A    G + A AL
Sbjct: 124 PLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASAL 163

>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* Length = 510

 Score = 81.6 bits (202), Expect = 5e-17
 Identities = 31/233 (13%), Positives = 58/233 (24%), Gaps = 67/233 (28%)

Query: 209 LELGGNNAIIVNEDADLNLAQ--QCLVFACCGTAGQRCTTTRRLFLHKKKID-------- 258
            ELG  N   +   A    A      V +     GQ CT    +F               
Sbjct: 252 GELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQ 311

Query: 259 ---------------------------------------------RPGYFVEPTIVTGLP 273
                                                            FV  +      
Sbjct: 312 SLIRQQSPSTLLTPGIRDSYQSQVVSRGSDDGIDVTFSQAESPCVASALFVTSSENW--- 368

Query: 274 HNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFT--KDVTNLFKWLGPQGS 331
                   E F P   +   +++ + ++ +  +   L+++I    +D   + + +     
Sbjct: 369 RKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEE 428

Query: 332 DCGLINVNIPTNGAEIGGA--FGGEK---YTGGGRESGSDSWKQYCRRSTVTI 379
             G +  N    G E+G A   GG             G+++  ++ R   V  
Sbjct: 429 IAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTSVGAEAIHRWLR--PVAY 479

>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* Length = 501

 Score =  108 bits (273), Expect = 4e-26
 Identities = 33/156 (21%), Positives = 63/156 (40%), Gaps = 5/156 (3%)

Query: 45  WKANGEIIPSINPSTGETIASVQQGNVQDYHRCIES-SRAAYAAWAALPAPRRGEIVRQI 103
           W  +G+ I   +P    TIA V   + ++  R ++   +    +   +P   R  ++R+ 
Sbjct: 27  WGGSGQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRKA 86

Query: 104 GDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERP--- 160
            D +   L    +++ +  GK  +  +GEV+  +D    A    +   G  +P +     
Sbjct: 87  ADIIERNLDVFAEVLVMNAGKPKSAAVGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDT 146

Query: 161 -GHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL 195
                L    PLGVV  I+ FN+P+         + 
Sbjct: 147 LETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSF 182

>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* Length = 501

 Score = 83.0 bits (206), Expect = 2e-17
 Identities = 31/127 (24%), Positives = 52/127 (40%), Gaps = 5/127 (3%)

Query: 261 GYFVEPTIVTGL---PHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTK 317
             +V+PT V        +  +  RE FAP+        LD+AI   N    GL +++F +
Sbjct: 371 PTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGR 430

Query: 318 DVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTV 377
           DV  + +    +  + G I +N           FGG K +G  RE    + +      T+
Sbjct: 431 DVVKIRR--AVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTI 488

Query: 378 TINHGKE 384
             N+  +
Sbjct: 489 VFNYKGK 495

>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* Length = 501

 Score = 59.5 bits (145), Expect = 6e-10
 Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 3/60 (5%)

Query: 206 KLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKKKIDRPGYFVE 265
           + ++ELGG +  IV EDADL+LA   +       AGQRC   + +   +    +    VE
Sbjct: 259 QYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGK---LVE 315

>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* Length = 534

 Score =  108 bits (273), Expect = 4e-26
 Identities = 35/170 (20%), Positives = 54/170 (31%), Gaps = 10/170 (5%)

Query: 41  DGTSWKANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIV 100
            G      G  I   +P TG  +  V    +        +     AA  AL   +R   +
Sbjct: 13  AGQWIAGTGAGITLTDPVTGVALVRVSSEGLDLARAFSFAREDGGAALRALTYAQRAARL 72

Query: 101 RQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERP 160
             I   L+ K      + +   G    +   ++   I    Y   L  +        +  
Sbjct: 73  ADIVKLLQAKRGDYYAIATANSGTTRNDSAVDIDGGIFTLSYYAKLGASLGEVHALRDGS 132

Query: 161 GHVLLENWN---------PLGVVGIISAFNFPVAVYGWNAAIALV-GVAV 200
              L ++ +           GV   I+AFNFP       AA AL+ GV V
Sbjct: 133 AESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVPV 182

>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* Length = 534

 Score = 74.3 bits (183), Expect = 1e-14
 Identities = 28/139 (20%), Positives = 46/139 (33%), Gaps = 19/139 (13%)

Query: 261 GYFVEPTI--VTGLPHNSRVVHRETFAPIVYVFPFDSLD--------EAITWNNEVKQGL 310
              V P +  V    + + +   E F P+  V P+             A+      +  L
Sbjct: 380 AACVAPHLFVVNDPDNATLLHDVEVFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSL 439

Query: 311 SSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGA--------FGGEKYTGGGRE 362
            +SI++ D  +L +         G ++   P+      G          GG    GGG E
Sbjct: 440 VASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQTGHGNVMPMSLHGGPGRAGGGEE 499

Query: 363 -SGSDSWKQYCRRSTVTIN 380
             G  +   Y RRS +   
Sbjct: 500 LGGLRALAFYHRRSAIQAA 518

>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* Length = 534

 Score = 57.7 bits (140), Expect = 3e-09
 Identities = 17/72 (23%), Positives = 32/72 (44%), Gaps = 8/72 (11%)

Query: 199 AVQSRFGKLLLELGGNNAIIVNEDAD-----LNLAQQCLVFACCGTAGQRCTTTRRLFLH 253
           A   R  +L ++    N+ I+  DA       +L  + +V      +GQ+CT  RR F+ 
Sbjct: 249 AFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVP 308

Query: 254 KKKIDRPGYFVE 265
           +  ++     +E
Sbjct: 309 EAALEP---VLE 317

>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} Length = 497

 Score =  104 bits (262), Expect = 9e-25
 Identities = 44/142 (30%), Positives = 66/142 (46%), Gaps = 6/142 (4%)

Query: 47  ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDA 106
              + I  ++PSTG+ I  +  G   D    +E ++AA  AWA L A  R  ++R   + 
Sbjct: 25  NESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQKAWAKLTARTRQNMLRTFANK 84

Query: 107 LRHKLVPLGQLVSLEMGKILAEGIGEVQ---EFIDICDYAVGLSRTYSGSILPSERPGHV 163
           +R     L  ++  E GK+L+    EV     FID             G ILPS+     
Sbjct: 85  IRENKHILAPMLVAEQGKLLSVAEMEVDVTATFIDY--GCDNALTIE-GDILPSDNQDEK 141

Query: 164 LLENWNPLGVVGIISAFNFPVA 185
           +  +  P GVV  I+A+NFP+A
Sbjct: 142 IYIHKVPRGVVVGITAWNFPLA 163

>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} Length = 497

 Score = 79.5 bits (197), Expect = 2e-16
 Identities = 29/115 (25%), Positives = 53/115 (46%), Gaps = 8/115 (6%)

Query: 253 HKKKIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSS 312
              +    G + EPT++  +  ++ VVH ETF PI+ +    S+++AI + N+   GLS+
Sbjct: 363 ATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGLSA 422

Query: 313 SIFTKDVTNLFKWLGPQGSDCGLINVN--IPTNGAEIGGAFGGEKYTGGGRESGS 365
            + T+   N+ +       + G + +N  +        G   G K +G G E   
Sbjct: 423 YVHTQSFANINQA--ISDLEVGEVYINRGMGEQHQ---GFHNGWKQSGFGGE-DG 471

>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} Length = 497

 Score = 45.2 bits (108), Expect = 2e-05
 Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 3/60 (5%)

Query: 206 KLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKKKIDRPGYFVE 265
            ++LELGG   ++V +DADL+ A +  ++      GQ CT   RL++H    D    F+ 
Sbjct: 253 PVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDE---FMA 309

>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} Length = 486

 Score =  103 bits (260), Expect = 2e-24
 Identities = 66/269 (24%), Positives = 96/269 (35%), Gaps = 74/269 (27%)

Query: 47  ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDA 106
              +    +NP+T E +  V     +D     +++  A+  W+ +  PRR  I+      
Sbjct: 18  KTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFKTWSKVAVPRRARILFNFQQL 77

Query: 107 LRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLE 166
           L      L  L+++E GK   E +GEV   I+  ++A G      G  L S       +E
Sbjct: 78  LSQHKEELAHLITIENGKNTKEALGEVGRGIENVEFAAGAPSLMMGDSLASIATD---VE 134

Query: 167 NWN---PLGVVGIISAFN---------FPVA----------------------------- 185
             N   P+GVVG I+ FN         FP+A                             
Sbjct: 135 AANYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSERTPLLTEKLVELFEKA 194

Query: 186 ---------VYGWN------------AAIALVG---VAVQ-----SRFGKLLLELGG-NN 215
                    VYG +             AI+ VG   V        S   K +  L G  N
Sbjct: 195 GLPKGVFNVVYGAHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSENLKRVQSLTGAKN 254

Query: 216 AIIVNEDADLNLAQQCLVFACCGTAGQRC 244
             IV  DA+L      +V A  G+AG+RC
Sbjct: 255 HTIVLNDANLEDTVTNIVGAAFGSAGERC 283

>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} Length = 486

 Score = 49.9 bits (120), Expect = 7e-07
 Identities = 37/124 (29%), Positives = 55/124 (44%), Gaps = 12/124 (9%)

Query: 261 GYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKD-- 318
           GYFV PTI   +     +   E FAP++ V    +L EAI   N+ +    + +FT +  
Sbjct: 360 GYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNSN 419

Query: 319 VTNLFKWLGPQGSDCGL--INVNIPTNGAEIGGAFGGEK--YTGGGRESGSDSWKQYCRR 374
               F+    +  D G+  IN+ +P   A     F G K  + G    +G DS   Y R+
Sbjct: 420 AIRYFR----ENIDAGMLGINLGVPAPMAFFP--FSGWKSSFFGTLHANGKDSVDFYTRK 473

Query: 375 STVT 378
             VT
Sbjct: 474 KVVT 477

>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* Length = 487

 Score =  103 bits (259), Expect = 2e-24
 Identities = 33/144 (22%), Positives = 64/144 (44%), Gaps = 6/144 (4%)

Query: 45  WKANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIG 104
           W       P  +P++G  +  V    V++    + ++  A+  W  + A  R  ++R+  
Sbjct: 21  WLPAAATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCRWREVSAKERSSLLRKWY 80

Query: 105 DALRHKLVPLGQLVSLEMGKILAEGIGEVQ---EFIDICDYAVGLSRTYSGSILPSERPG 161
           + +      L ++++ E GK L E  GE+     F++   ++    R Y G I+ +    
Sbjct: 81  NLMIQNKDDLARIITAESGKPLKEAHGEILYSAFFLEW--FSEEARRVY-GDIIHTPAKD 137

Query: 162 HVLLENWNPLGVVGIISAFNFPVA 185
              L    P+GV  +I+ +NFP A
Sbjct: 138 RRALVLKQPIGVAAVITPWNFPSA 161

>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* Length = 487

 Score = 79.9 bits (198), Expect = 2e-16
 Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 8/113 (7%)

Query: 255 KKIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSI 314
           K+      F EPT++  +  +    H ETF P+  V  FD+ +EAI   N    GL+   
Sbjct: 363 KRHQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYF 422

Query: 315 FTKDVTNLFKWLGPQGSDCGLINVN--IPTNGAEIGGAFGGEKYTGGGRESGS 365
           +++D   +++    +  + G++ VN  + ++       FGG K +G GRE GS
Sbjct: 423 YSQDPAQIWRV--AEQLEVGMVGVNEGLISSVE---CPFGGVKQSGLGRE-GS 469

>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* Length = 487

 Score = 45.6 bits (109), Expect = 2e-05
 Identities = 14/60 (23%), Positives = 28/60 (46%), Gaps = 3/60 (5%)

Query: 206 KLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKKKIDRPGYFVE 265
           ++ +ELGG    IV + A+++ A    + +     GQ C  + +  + +   D    FV+
Sbjct: 254 RVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDA---FVK 310

>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* Length = 520

 Score =  103 bits (259), Expect = 3e-24
 Identities = 47/154 (30%), Positives = 75/154 (48%), Gaps = 8/154 (5%)

Query: 47  ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAY--AAWAALPAPRRGEIVRQIG 104
           AN      INP   E I +V +G  +D  R I ++R A+    W+   A  RG+ VR I 
Sbjct: 45  ANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFESGEWSQETAETRGKKVRAIA 104

Query: 105 DALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGH-- 162
           D ++     L +L +L+ GK L E   ++ +  ++  Y  GL+    G ++ S  P    
Sbjct: 105 DKIKEHREALARLETLDTGKTLEESYADMDDIHNVFMYFAGLADKDGGEMIDSPIPDTES 164

Query: 163 -VLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL 195
            ++ E   P+GVV  I+ +N+P+    W  A AL
Sbjct: 165 KIVKE---PVGVVTQITPWNYPLLQASWKIAPAL 195

>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* Length = 520

 Score = 81.1 bits (201), Expect = 9e-17
 Identities = 37/136 (27%), Positives = 60/136 (44%), Gaps = 25/136 (18%)

Query: 261 GYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVT 320
           G F EPT++T    + R+V  E F P+V V  F++  EAI   N+   GL+ ++F+KD+ 
Sbjct: 393 GLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFETEQEAIQLANDSIYGLAGAVFSKDIG 452

Query: 321 NLFK----------WLGPQGSDCGLINV-NIPTNGAEIGGAFGGEKYTGGGRESGSDSWK 369
              +          W          IN  +     A     +GG K +G GRE G +  +
Sbjct: 453 KAQRVANKLKLGTVW----------INDFHPYFAQAP----WGGYKQSGIGRELGKEGLE 498

Query: 370 QYCRRSTVTINHGKEI 385
           +Y     +  N   ++
Sbjct: 499 EYLVSKHILTNTNPQL 514

>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* Length = 520

 Score = 53.7 bits (130), Expect = 5e-08
 Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 3/57 (5%)

Query: 209 LELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKKKIDRPGYFVE 265
           LELGG N  I+ +DAD  LA    +      AGQ C+   R+ +     D+   F +
Sbjct: 278 LELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDK---FEQ 331

>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* Length = 503

 Score =  103 bits (258), Expect = 4e-24
 Identities = 34/147 (23%), Positives = 63/147 (42%), Gaps = 5/147 (3%)

Query: 51  IIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHK 110
             P   P+TG  +  +     ++  + ++S++AAY  W+ +    R  ++ +    +R +
Sbjct: 37  TEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIERSRVMLEAARIIRER 96

Query: 111 LVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGH--VLLENW 168
              + +L  +  GK + E   ++       +Y  GL+ T SG  +            E  
Sbjct: 97  RDNIAKLEVINNGKTITEAEYDIDAAWQCIEYYAGLAPTLSGQHIQLPGGAFAYTRRE-- 154

Query: 169 NPLGVVGIISAFNFPVAVYGWNAAIAL 195
            PLGV   I A+N+P  +  W  A AL
Sbjct: 155 -PLGVCAGILAWNYPFMIAAWKCAPAL 180

>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* Length = 503

 Score = 79.5 bits (197), Expect = 2e-16
 Identities = 35/122 (28%), Positives = 60/122 (49%), Gaps = 3/122 (2%)

Query: 261 GYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVT 320
           GYF+ P ++     +   V  E F P++ V PFD+ +E +   N    GL+S +FT+D++
Sbjct: 379 GYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDIS 438

Query: 321 NLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTIN 380
              +       + G   +N   + + +   FGG K +G GRE+G  +   Y +  TV + 
Sbjct: 439 RAHRV--AANLEAGTCYINTY-SISPVEVPFGGYKMSGFGRENGQATVDYYSQLKTVIVE 495

Query: 381 HG 382
            G
Sbjct: 496 MG 497

>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* Length = 503

 Score = 50.6 bits (122), Expect = 4e-07
 Identities = 18/57 (31%), Positives = 33/57 (57%), Gaps = 3/57 (5%)

Query: 209 LELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKKKIDRPGYFVE 265
           LELGG + +++ +D +L  A +  + A   T GQ CT   R+F+ ++ + +   F+E
Sbjct: 262 LELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQ---FLE 315

>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} Length = 484

 Score =  101 bits (255), Expect = 8e-24
 Identities = 39/135 (28%), Positives = 60/135 (44%), Gaps = 3/135 (2%)

Query: 52  IPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKL 111
             S+NP T E  AS      +     I  + A Y  W       R EI+  I +AL+   
Sbjct: 6   YQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYKKWRHEEPASRAEILHDIANALKEHE 65

Query: 112 VPLGQLVSLEMGKILAEGIGEVQEFIDICD-YAVGLSRTYSGSILPSERPGHVLLENWNP 170
             L ++++LEMGK+L+E   EV+  + IC+ YA         + L S+  G+        
Sbjct: 66  DELAKMMTLEMGKLLSESKEEVELCVSICNYYADHGPEMLKPTKLNSD-LGNAYYL-KQS 123

Query: 171 LGVVGIISAFNFPVA 185
            GV+     +NFP+ 
Sbjct: 124 TGVIMACEPWNFPLY 138

>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} Length = 484

 Score = 80.3 bits (199), Expect = 1e-16
 Identities = 35/108 (32%), Positives = 52/108 (48%), Gaps = 3/108 (2%)

Query: 255 KKIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSI 314
            +ID  G F  PTI+T +  ++ V  +E F PI  VF  +  + AI   N+   GL SS+
Sbjct: 335 PEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSV 394

Query: 315 FTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRE 362
              D+    K +  Q  + G+  +N     +     FGG K +G GRE
Sbjct: 395 IGSDIDRAKK-VSAQ-IETGMTVINGRWITSG-ELPFGGIKKSGYGRE 439

>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} Length = 484

 Score = 52.9 bits (128), Expect = 9e-08
 Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 7/74 (9%)

Query: 196 VGVAVQSRFG----KLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLF 251
            G AV    G    K  +ELGGN+A IV +DAD  + +  L  A     GQ CT+++R+ 
Sbjct: 213 GGSAVAEAAGKNLKKSTMELGGNDAFIVLDDADPQVLRNVLNDARTYNDGQVCTSSKRII 272

Query: 252 LHKKKIDRPGYFVE 265
           + K + D     + 
Sbjct: 273 VEKSRYDE---VLH 283

>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} Length = 504

 Score =  101 bits (254), Expect = 1e-23
 Identities = 46/142 (32%), Positives = 68/142 (47%), Gaps = 6/142 (4%)

Query: 47  ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDA 106
           A+G  I   NP+ G  I +V   +V      I++S  A + WAA  A  R  I+R+  D 
Sbjct: 45  ADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALSGWAAKTAKERAGILRKWFDL 104

Query: 107 LRHKLVPLGQLVSLEMGKILAEGIGEVQ---EFIDICDYAVGLSRTYSGSILPSERPGHV 163
           +      +  +++ E GK LAE  GEV     FI+   +A    R Y G  +P+ + G  
Sbjct: 105 IIANADDIALIMTSEQGKPLAEARGEVLYAASFIEW--FAEEAKRVY-GDTIPAPQNGQR 161

Query: 164 LLENWNPLGVVGIISAFNFPVA 185
           L     P+GV   I+ +NFP A
Sbjct: 162 LTVIRQPVGVTAAITPWNFPAA 183

>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} Length = 504

 Score = 89.6 bits (223), Expect = 1e-19
 Identities = 55/219 (25%), Positives = 85/219 (38%), Gaps = 65/219 (29%)

Query: 206 KLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRL---------FLHK-- 254
           ++ LELGGN   IV +DADL+ A    + +    AGQ C    R+         F  K  
Sbjct: 273 RISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLA 332

Query: 255 ---------------------------KKIDR-------------------PGYFVEPTI 268
                                       K+                      G F EP I
Sbjct: 333 AKVKELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKELGGLFFEPGI 392

Query: 269 VTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGP 328
           +TG+  +  V   ETF P+  +F FD+ +E I   N+   GL++  +T++ +   +    
Sbjct: 393 LTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGLAAYFYTENFSRAIRV--S 450

Query: 329 QGSDCGLINVN--IPTNGAEIGGAFGGEKYTGGGRESGS 365
           +  + G++  N  + +N       FGG K +G GRE GS
Sbjct: 451 EALEYGMVGHNTGLISNEV---APFGGVKQSGLGRE-GS 485

>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} Length = 481

 Score =  101 bits (254), Expect = 1e-23
 Identities = 46/142 (32%), Positives = 69/142 (48%), Gaps = 6/142 (4%)

Query: 47  ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDA 106
            NGE I   NP+ G+ + SV +    +    I+++  A  AW AL A  R  I+R   + 
Sbjct: 22  NNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERATILRNWFNL 81

Query: 107 LRHKLVPLGQLVSLEMGKILAEGIGEVQ---EFIDICDYAVGLSRTYSGSILPSERPGHV 163
           +      L +L++LE GK LAE  GE+     FI+   +A    R Y G  +P  +    
Sbjct: 82  MMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEW--FAEEGKRIY-GDTIPGHQADKR 138

Query: 164 LLENWNPLGVVGIISAFNFPVA 185
           L+    P+GV   I+ +NFP A
Sbjct: 139 LIVIKQPIGVTAAITPWNFPAA 160

>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} Length = 481

 Score = 79.9 bits (198), Expect = 1e-16
 Identities = 36/113 (31%), Positives = 62/113 (54%), Gaps = 8/113 (7%)

Query: 255 KKIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSI 314
           K  +R G F +PTI+  +P N++V   ETF P+  +F F    + I   N+ + GL++  
Sbjct: 358 KAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYF 417

Query: 315 FTKDVTNLFKWLGPQGSDCGLINVN--IPTNGAEIGGAFGGEKYTGGGRESGS 365
           + +D++ +F+    +  + G++ +N  I +N       FGG K +G GRE GS
Sbjct: 418 YARDLSRVFRV--GEALEYGIVGINTGIISNEV---APFGGIKASGLGRE-GS 464

>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} Length = 481

 Score = 45.2 bits (108), Expect = 2e-05
 Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 3/60 (5%)

Query: 206 KLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKKKIDRPGYFVE 265
           K+ LELGGN   IV +DADL+ A +  + +    AGQ C    RL++     DR   F E
Sbjct: 250 KVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDR---FAE 306

>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} Length = 506

 Score =  101 bits (254), Expect = 1e-23
 Identities = 38/142 (26%), Positives = 61/142 (42%), Gaps = 6/142 (4%)

Query: 47  ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDA 106
           A G      NP+TG  IA V     +D    +E+ ++A       P   R + +  I D 
Sbjct: 24  AGGATFDVYNPATGSVIAKVPSMPEEDVVAAVEAGQSALRLTNPWPIETRRKWLEDIRDG 83

Query: 107 LRHKLVPLGQLVSLEMGKILAEGIGEVQ---EFIDICDYAVGLSRTYSGSILPSERPGHV 163
           L+     +G+++ +E GK   E  GEV     F D    A  +S       +P +     
Sbjct: 84  LKENREEIGRILCMEHGKPWKEAQGEVDYAAGFFDY--CAKHISALD-SHTIPEKPKDCT 140

Query: 164 LLENWNPLGVVGIISAFNFPVA 185
              ++ P+GV G+I  +NFP+ 
Sbjct: 141 WTVHYRPVGVTGLIVPWNFPIG 162

>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} Length = 506

 Score = 77.6 bits (192), Expect = 1e-15
 Identities = 33/108 (30%), Positives = 46/108 (42%), Gaps = 8/108 (7%)

Query: 260 PGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDV 319
            G F  PT+V G+         ETF P+V +  F + +E I   N+ + GL+S +FT D 
Sbjct: 366 DGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTEEEVIDAGNDTEFGLASYVFTADA 425

Query: 320 TNLFKWLGPQGSDCGLINVN--IPTNGAEIGGAFGGEKYTGGGRESGS 365
               +     G   G +  N             FGG K +G GRE G 
Sbjct: 426 ERAQRV--AAGLRFGHVGWNTGTGPTPE---APFGGMKASGIGRE-GG 467

>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} Length = 506

 Score = 45.6 bits (109), Expect = 2e-05
 Identities = 25/60 (41%), Positives = 31/60 (51%), Gaps = 3/60 (5%)

Query: 206 KLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKKKIDRPGYFVE 265
           KL LELGGN   IV +DADL  A   L+       GQ C    R+F+H+K  D    F +
Sbjct: 252 KLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADA---FGQ 308

>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q Length = 484

 Score =  100 bits (252), Expect = 2e-23
 Identities = 41/142 (28%), Positives = 68/142 (47%), Gaps = 6/142 (4%)

Query: 47  ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDA 106
            +       +P+TGE++ +V +    +  R IE+++AA+A W    A  R  I+R+  D 
Sbjct: 25  DSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWAGWRMKTAKERAAILRRWFDL 84

Query: 107 LRHKLVPLGQLVSLEMGKILAEGIGEVQ---EFIDICDYAVGLSRTYSGSILPSERPGHV 163
           +      L  +++ E GK LAE  GE+     FI+   +A    R   G  LP+      
Sbjct: 85  VIANSDDLALILTTEQGKPLAEAKGEIAYAASFIEW--FAEEGKRVA-GDTLPTPDANKR 141

Query: 164 LLENWNPLGVVGIISAFNFPVA 185
           ++    P+GV   I+ +NFP A
Sbjct: 142 IVVVKEPIGVCAAITPWNFPAA 163

>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q Length = 484

 Score = 80.3 bits (199), Expect = 1e-16
 Identities = 33/113 (29%), Positives = 62/113 (54%), Gaps = 8/113 (7%)

Query: 255 KKIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSI 314
           K+      F EPT++TG+  +  V   ETF P+  +F F S +E +   N+ + GL++ +
Sbjct: 361 KRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLAAYL 420

Query: 315 FTKDVTNLFKWLGPQGSDCGLINVN--IPTNGAEIGGAFGGEKYTGGGRESGS 365
           +++D+  +++    +  + G++ +N  + +N       FGG K +G GRE GS
Sbjct: 421 YSRDIGRVWRV--AEALEYGMVGINTGLISNEV---APFGGVKQSGLGRE-GS 467

>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q Length = 484

 Score = 45.2 bits (108), Expect = 2e-05
 Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 3/60 (5%)

Query: 206 KLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKKKIDRPGYFVE 265
           KL LELGGN   IV +DADL+ A +  + +     GQ C  T R F+H++  D    F +
Sbjct: 253 KLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDA---FAD 309

>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A Length = 495

 Score =  100 bits (252), Expect = 2e-23
 Identities = 39/159 (24%), Positives = 69/159 (43%), Gaps = 7/159 (4%)

Query: 41  DGTSWKANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIV 100
           +G      GE  P  NP+TG+ +  + + + +     + ++ AA+A W       R E +
Sbjct: 29  NGELVSGEGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVRAECL 88

Query: 101 RQIGDALRHKLVPLGQLVSLEMGKILAEGIG-EVQEFIDICDYAVGLSRTYSGSILPSER 159
            ++ D +        +L S   GK L      E+   +D+  +  G +R  +G       
Sbjct: 89  LKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYL 148

Query: 160 PGH---VLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL 195
            GH   +  +   PLGVV  I+ +N+P+ +  W  A AL
Sbjct: 149 EGHTSMIRRD---PLGVVASIAPWNYPLMMAAWKLAPAL 184

>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A Length = 495

 Score = 95.7 bits (239), Expect = 1e-21
 Identities = 36/137 (26%), Positives = 64/137 (46%), Gaps = 23/137 (16%)

Query: 255 KKIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSI 314
           +K    GY+  PT++ G   +  +V +E F P+V V PFD+ ++ + W N+ + GL+SS+
Sbjct: 372 EKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSV 431

Query: 315 FTKDVTNLFK----------WLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESG 364
           +TKDV    +          W          +N +     +E+    GG+K +G G++  
Sbjct: 432 WTKDVGRAHRVSARLQYGCTW----------VNTHFMLV-SEM--PHGGQKLSGYGKDMS 478

Query: 365 SDSWKQYCRRSTVTINH 381
               + Y     V + H
Sbjct: 479 LYGLEDYTVVRHVMVKH 495

>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A Length = 462

 Score =   99 bits (250), Expect = 3e-23
 Identities = 35/138 (25%), Positives = 63/138 (45%), Gaps = 1/138 (0%)

Query: 48  NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDAL 107
                 S+NP+TG+T+A++   N Q+    +  + + +  W      +R + +R IG AL
Sbjct: 5   TATQALSVNPATGQTLAAMPWANAQEIEHALSLAASGFKKWKMTSVAQRAQTLRDIGQAL 64

Query: 108 RHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLEN 167
           R     + Q ++ EMGK + +   EV +   +CD+             P+       +  
Sbjct: 65  RAHAEEMAQCITREMGKPIKQARAEVTKSAALCDWYAEHGPAMLNPE-PTLVENQQAVIE 123

Query: 168 WNPLGVVGIISAFNFPVA 185
           + PLGV+  I  +NFP+ 
Sbjct: 124 YRPLGVILAIMPWNFPLW 141

>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A Length = 462

 Score = 81.8 bits (203), Expect = 4e-17
 Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 3/126 (2%)

Query: 255 KKIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSI 314
           +KI   G +   T++  +  +     +E F P+  +        A+   N+ + GLS++I
Sbjct: 338 EKIAGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATI 397

Query: 315 FTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRR 374
           FT D T   + +  +  +CG + +N  +       AFGG K +G GRE       ++C  
Sbjct: 398 FTADDTLAAE-MAAR-LECGGVFINGYSASDA-RVAFGGVKKSGFGRELSHFGLHEFCNV 454

Query: 375 STVTIN 380
            TV  N
Sbjct: 455 QTVWKN 460

>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A Length = 462

 Score = 52.1 bits (126), Expect = 2e-07
 Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 7/74 (9%)

Query: 196 VGVAVQSRFG----KLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLF 251
            G A+ ++ G    K +LELGG++  IV  DADL LA +  V       GQ C   +R  
Sbjct: 216 AGAAIGAQAGAALKKCVLELGGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFI 275

Query: 252 LHKKKIDRPGYFVE 265
           + +        F +
Sbjct: 276 VEEGIAQA---FTD 286

>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} Length = 495

 Score =  100 bits (251), Expect = 3e-23
 Identities = 34/154 (22%), Positives = 61/154 (39%), Gaps = 8/154 (5%)

Query: 47  ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYA--AWAALPAPRRGEIVRQIG 104
           +  ++I    P+TGE +  V      D    + ++RAA+    W + P   R  ++    
Sbjct: 21  STSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPHERAAVIAAAV 80

Query: 105 DALRHKLVPLGQLVSLEMGKILAE-GIGEVQEFIDICDYAVGLSRTYSGSILPSERPGH- 162
             L  +     +L++ E G+             +   +Y  G +   + +   +   G  
Sbjct: 81  KMLAERKDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTETRTGSYGQS 140

Query: 163 -VLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL 195
            V  E   P+GVVG I A+N P+ +     A AL
Sbjct: 141 IVSRE---PVGVVGAIVAWNVPLFLAVNKIAPAL 171

>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} Length = 495

 Score = 71.8 bits (177), Expect = 7e-14
 Identities = 34/125 (27%), Positives = 65/125 (52%), Gaps = 4/125 (3%)

Query: 261 GYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVT 320
           G+F++PT+   + +   +   E F P++ + P+D+ ++AI   N+   GL+ S++T DV 
Sbjct: 366 GFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVWTTDVP 425

Query: 321 NLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTIN 380
              K +  Q    G   +N      + G  FGG K +G GRE+G +  + + ++ +V + 
Sbjct: 426 KGIK-ISQQ-IRTGTYGIN--WYAFDPGSPFGGYKNSGIGRENGPEGVEHFTQQKSVLLP 481

Query: 381 HGKEI 385
            G  +
Sbjct: 482 MGYTV 486

>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} Length = 495

 Score = 53.3 bits (129), Expect = 7e-08
 Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 7/74 (9%)

Query: 196 VGVAVQSRFGKLL----LELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLF 251
           VG  V  R  ++L    LELGG +A I+ ED DL  A   +VF+    AGQ C    R+ 
Sbjct: 236 VGREVGRRAAEMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRIL 295

Query: 252 LHKKKIDRPGYFVE 265
             + + D     V 
Sbjct: 296 APRSRYDE---IVA 306

>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} Length = 521

 Score = 99.6 bits (249), Expect = 5e-23
 Identities = 38/153 (24%), Positives = 72/153 (47%), Gaps = 6/153 (3%)

Query: 47  ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDA 106
            +G +    NP+TGE   +V   +  D    +ES++AA   WAA    RR  +  +    
Sbjct: 39  TSGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAAQPKWAATNPQRRARVFMKFVQL 98

Query: 107 LRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLE 166
           L   +  L +++S E GK + +  G++   +++C++ +G+             PG   ++
Sbjct: 99  LNDNMNELAEMLSREHGKTIDDAKGDIVRGLEVCEFVIGIPHLQKSEFTEGAGPG---ID 155

Query: 167 NWN---PLGVVGIISAFNFPVAVYGWNAAIALV 196
            ++   P+G+   I+ FNFP  +  W  A A+ 
Sbjct: 156 MYSIRQPVGIGAGITPFNFPGMIPMWMFAPAIA 188

>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} Length = 521

 Score = 48.0 bits (115), Expect = 3e-06
 Identities = 31/124 (25%), Positives = 55/124 (44%), Gaps = 12/124 (9%)

Query: 261 GYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKD-- 318
           G+F+   +   +  +  +   E F P++ V    + +EA++   + + G   +I+T+D  
Sbjct: 385 GHFIGGCLFDDVTPDMDIYKTEIFGPVLSVVRARNYEEALSLPMKHEYGNGVAIYTRDGD 444

Query: 319 VTNLFKWLGPQGSDCGL--INVNIPTNGAEIGGAFGGEK--YTGGGRESGSDSWKQYCRR 374
               F        + G+  +NV IP   A     FGG K    G   + G+DS K + R 
Sbjct: 445 AARDFA----SRINIGMVGVNVPIPVPLAYHS--FGGWKSSSFGDLNQHGTDSIKFWTRT 498

Query: 375 STVT 378
            T+T
Sbjct: 499 KTIT 502

>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} Length = 517

 Score = 98.4 bits (246), Expect = 1e-22
 Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 6/152 (3%)

Query: 47  ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDA 106
             G    SI P+TGE IA +         R I S++ A   WAA+    RG I+++  D 
Sbjct: 27  NTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQKEWAAMSPMARGRILKRAADI 86

Query: 107 LRHKLVPLGQLVSLEMGKILAEG-IGEVQEFIDICDYAVGLSRT-YSGSILPSERP-GHV 163
           +R +   L  L +L+ GK + E  + +     D  ++  G++ +  +G  +P      + 
Sbjct: 87  MRERNDALSTLETLDTGKPIQETIVADPTSGADAFEFFGGIAPSALNGDYIPLGGDFAYT 146

Query: 164 LLENWNPLGVVGIISAFNFPVAVYGWNAAIAL 195
                 PLGV   I A+N+P  +  W AA AL
Sbjct: 147 KRV---PLGVCVGIGAWNYPQQIACWKAAPAL 175

>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} Length = 517

 Score = 80.3 bits (199), Expect = 1e-16
 Identities = 35/123 (28%), Positives = 60/123 (48%), Gaps = 3/123 (2%)

Query: 261 GYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVT 320
           G +V+PT+   +  +  +   E F P++ V  FD  DE +   N  + GL+  +FT D+ 
Sbjct: 371 GAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGVFTADLA 430

Query: 321 NLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTIN 380
              +     G + G + +N   N   +   FGG K +G GRE+ + + + Y    TV ++
Sbjct: 431 RAHRV--VDGLEAGTLWINTY-NLCPVEIPFGGSKQSGFGRENSAAALEHYSELKTVYVS 487

Query: 381 HGK 383
            GK
Sbjct: 488 TGK 490

>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} Length = 517

 Score = 50.6 bits (122), Expect = 5e-07
 Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 3/57 (5%)

Query: 209 LELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKKKIDRPGYFVE 265
           +ELGG + +IV +DAD+  A    +     ++GQ C+   R+F+ KK   R   F+E
Sbjct: 257 MELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKAR---FLE 310

>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} Length = 497

 Score = 97.6 bits (244), Expect = 2e-22
 Identities = 29/152 (19%), Positives = 60/152 (39%), Gaps = 6/152 (3%)

Query: 47  ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDA 106
           +    +  I+PST E  A +  G+ +D  + I +++ A+  W       R   V +I + 
Sbjct: 38  STPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQTWKTTSPHERLGFVEKILEI 97

Query: 107 LRHKLVPLGQLVSLEMGKILAE-GIGEVQEFIDICDYAVGLSRTYSGSILPSERPGH--V 163
              +   + + +S+EMG  +      +           +   + +S      E      +
Sbjct: 98  YEKRSSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEALIEGNEQAIL 157

Query: 164 LLENWNPLGVVGIISAFNFPVAVYGWNAAIAL 195
             +    +GVVG+I+ +N+P+         AL
Sbjct: 158 HYD---AIGVVGLITPWNWPMNQVTLKVIPAL 186

>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} Length = 497

 Score = 68.7 bits (169), Expect = 8e-13
 Identities = 33/118 (27%), Positives = 61/118 (51%), Gaps = 4/118 (3%)

Query: 261 GYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVT 320
           GY+V PT+   +  + R+   E F P++ + PF++ DEA+T  N+ + GL++ I ++D +
Sbjct: 382 GYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDEAVTLANDTEYGLTNYIQSQDRS 441

Query: 321 NLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVT 378
              +         G++ VN   +    G  FGG K++G  RE G    K++     ++
Sbjct: 442 KCRRI--AAQVRSGMVEVN--GHELPGGSYFGGVKFSGRAREGGLWGIKEFLDTKAIS 495

>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} Length = 497

 Score = 47.6 bits (114), Expect = 5e-06
 Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 8/74 (10%)

Query: 196 VGVAVQSRFGKLL----LELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLF 251
            G  +       L    LELGG  A I+  DAD++  Q+  V  C   +GQ C    R+ 
Sbjct: 252 AGKDISKNASNTLKRVCLELGGKGANIIFADADIDALQRG-VRHCFYNSGQSCNAPTRML 310

Query: 252 LHKKKIDRPGYFVE 265
           + +   D+    ++
Sbjct: 311 VEQAIYDK---AIK 321

>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} Length = 528

 Score = 97.5 bits (243), Expect = 3e-22
 Identities = 34/160 (21%), Positives = 59/160 (36%), Gaps = 17/160 (10%)

Query: 47  ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDA 106
                 P+  P+    + +V+       +R  E++  A+  +       R   +R I D 
Sbjct: 43  GTFASAPAHGPAHDFAVGTVE-----LVNRACEAAEEAFWTYGYSSRKERAAFLRAIADE 97

Query: 107 LRHKLVPLGQLVSLEMGKILAEGIGEVQE-------FIDICDYAVGLSRTYSGSILPSER 159
           +  +   + ++ S E G   A   GE          F D  +    L R    + +P  +
Sbjct: 98  IEARAEAITEIGSQETGLPEARLNGERGRTTGQLRLFADHIEKGDYLDRRV-DAAMPERQ 156

Query: 160 P--GHVLLENWNPLGVVGIISAFNFPVA--VYGWNAAIAL 195
           P     +     P+G V +  A NFP+A    G + A AL
Sbjct: 157 PAPRQEIRLVQRPVGPVAVFGASNFPLAFSTAGGDTAAAL 196

>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} Length = 528

 Score = 76.7 bits (189), Expect = 2e-15
 Identities = 28/213 (13%), Positives = 49/213 (23%), Gaps = 59/213 (27%)

Query: 209 LELGGNNAIIVNEDADLNLAQQC---LVFACCGTAGQRCTTTRRLFLHKKKI-------- 257
            ELG  N + +  +A    A+        +    AGQ CT      + +           
Sbjct: 285 GELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPGIAVVIEGADADRFTTAA 344

Query: 258 ----------------------------------------DRPGYFVEPTI---VTGLPH 274
                                                   +  G    P +         
Sbjct: 345 VEALAKVAPQTMLTDGIAKAYRDGQARFATRNAVKPLLATESSGRDASPNLFETTGAQFL 404

Query: 275 NSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFT--KDVTNLFKWLGPQGSD 332
               +  E F P+  V    S  E        +  L+++I     D+    +        
Sbjct: 405 ADHALGEEVFGPLGLVVRVGSPAEMEELARGFQGQLTATIHMDAGDLETARRLRPVLERK 464

Query: 333 CGLINVNIPTNGAEIGGA---FGGEKYTGGGRE 362
            G + VN    G E+  +    G    +     
Sbjct: 465 AGRVLVNGFPTGVEVVDSMVHGGPYPASTNFGA 497

>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} Length = 515

 Score = 96.9 bits (242), Expect = 4e-22
 Identities = 33/152 (21%), Positives = 64/152 (42%), Gaps = 6/152 (3%)

Query: 47  ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDA 106
            +GE  PS++P+T E +    +G  ++  R  +++  A+  W+   A  R   + +I + 
Sbjct: 39  ESGETFPSLDPATNEVLGVAARGGEREVDRAAKAAHEAFQRWSRTKAKERKRYLLRIAEL 98

Query: 107 LRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLS-RTYSGSILPSERPGH--V 163
           +      L  +  L+ G++L     +V    +   +    +         P +R      
Sbjct: 99  IEKHADELAVMECLDAGQVLRIVRAQVARAAENFAFYAEYAEHAMEDRTFPVDRDWLYYT 158

Query: 164 LLENWNPLGVVGIISAFNFPVAVYGWNAAIAL 195
           +     P G VGII+ +N P+ +  W  A AL
Sbjct: 159 VRV---PAGPVGIITPWNAPLMLSTWRIAPAL 187

>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} Length = 515

 Score = 83.0 bits (206), Expect = 2e-17
 Identities = 37/148 (25%), Positives = 66/148 (44%), Gaps = 9/148 (6%)

Query: 235 ACCGTAGQRCTTTRRLFLHKKKIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFD 294
           A     G+R  T+ R     +     G ++ PT+  G  H  ++   E F P++   PF 
Sbjct: 368 ARLLVGGERAKTSFRGEDLSR-----GNYLLPTVFVGENH-MKIAQEEIFGPVLVAIPFK 421

Query: 295 SLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGE 354
             +EA+   N+ K GL++ +FT+D+    +       + G++ +N   N   +   FGG 
Sbjct: 422 DEEEALRKANDTKYGLAAYVFTRDLERAHRL--ALELEAGMVYLNSH-NVRHLPTPFGGV 478

Query: 355 KYTGGGRESGSDSWKQYCRRSTVTINHG 382
           K +G  RE G+ +   Y    T+ +   
Sbjct: 479 KGSGDRREGGTYALDFYTDLKTIALPLR 506

>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} Length = 515

 Score = 51.4 bits (124), Expect = 3e-07
 Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 3/57 (5%)

Query: 209 LELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKKKIDRPGYFVE 265
            ELGG +  +V  DADL  A   +VF      G+RCT + RL + +K  +    FV 
Sbjct: 270 PELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFED---FVG 323

>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* Length = 498

 Score = 96.8 bits (242), Expect = 4e-22
 Identities = 39/138 (28%), Positives = 62/138 (44%), Gaps = 23/138 (16%)

Query: 255 KKIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSI 314
           +     G+F +PT+V G      +V RE F P+V V  F   D+A+ W N+   GL+SS+
Sbjct: 374 RTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAWANDSDYGLASSV 433

Query: 315 FTKDVTNLFK----------WLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESG 364
           +TKD++   +          W          IN +      E+    GG K +G G++  
Sbjct: 434 WTKDISKAMRAASRLQYGCTW----------INTHFMLT-NEM--PHGGIKQSGYGKDMS 480

Query: 365 SDSWKQYCRRSTVTINHG 382
             + + Y     + INHG
Sbjct: 481 VYALEDYTAVRHIMINHG 498

>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* Length = 498

 Score = 95.3 bits (238), Expect = 1e-21
 Identities = 34/163 (20%), Positives = 65/163 (39%), Gaps = 8/163 (4%)

Query: 38  GVYDGTSW-KANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRR 96
            +  G+ +          +NP TG  I  + + +       ++++  A+  W+      R
Sbjct: 27  QLLIGSRFEAGTEAEEHILNPRTGAGIIDLAEASHAQIDAAVDAAERAFVGWSQTTPAER 86

Query: 97  GEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIG-EVQEFIDICDYAVGLSRTYSGSIL 155
              + +I DA+  +      L +L  GK +      E+   ID   +  G  R       
Sbjct: 87  SNALLKIADAIEKEADEFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLHAPAA 146

Query: 156 PSERPGH---VLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL 195
               PGH   +  +   P+G+VG I+ +N+P+ +  W  A A+
Sbjct: 147 GEYLPGHTSMIRRD---PIGIVGSIAPWNYPLMMMAWKLAPAI 186

>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* Length = 498

 Score = 50.2 bits (121), Expect = 6e-07
 Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 3/57 (5%)

Query: 209 LELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKKKIDRPGYFVE 265
           LELGG   +IV  DADL      +       AGQ CT   R++      ++    V 
Sbjct: 268 LELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEK---LVA 321

>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} PDB: 3iwk_A* 4a0m_A* Length = 503

 Score = 96.8 bits (242), Expect = 4e-22
 Identities = 42/160 (26%), Positives = 67/160 (41%), Gaps = 14/160 (8%)

Query: 47  ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAA-----WAALPAPRRGEIVR 101
              + IP INP+T   I  +     +D    + +++ A        WA      R   +R
Sbjct: 20  VLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWATASGAVRARYLR 79

Query: 102 QIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGS-ILPSERP 160
            I   +  K   L +L S++ GK L E   ++ +     +Y   L+         P   P
Sbjct: 80  AIAAKVTEKKPELAKLESIDCGKPLDEAAWDIDDVAGCFEYYADLAEKLDARQKAPVSLP 139

Query: 161 G-----HVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL 195
                 HVL E   P+GVVG+I+ +N+P+ +  W  A AL
Sbjct: 140 MDTFKSHVLRE---PIGVVGLITPWNYPMLMATWKVAPAL 176

>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} PDB: 3iwk_A* 4a0m_A* Length = 503

 Score = 81.0 bits (201), Expect = 8e-17
 Identities = 39/130 (30%), Positives = 59/130 (45%), Gaps = 15/130 (11%)

Query: 261 GYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKD-- 318
           G+F+EPTI+T +  N ++   E F P++ V  F + +EAI   N+   GL +++ + D  
Sbjct: 372 GFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLANDTVYGLGAAVISNDLE 431

Query: 319 ----VTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRR 374
               VT  FK         G++ VN           +GG K +G GRE G      Y   
Sbjct: 432 RCERVTKAFK--------AGIVWVNCS-QPCFTQAPWGGVKRSGFGRELGEWGLDNYLSV 482

Query: 375 STVTINHGKE 384
             VT    +E
Sbjct: 483 KQVTQYISEE 492

>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} PDB: 3iwk_A* 4a0m_A* Length = 503

 Score = 54.1 bits (131), Expect = 4e-08
 Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 3/57 (5%)

Query: 209 LELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKKKIDRPGYFVE 265
           LELGG + ++V ED DL+ A +  +F C  T GQ C+ T RL LH+        F+ 
Sbjct: 259 LELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATE---FLN 312

>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} Length = 528

 Score = 96.9 bits (242), Expect = 5e-22
 Identities = 40/152 (26%), Positives = 73/152 (48%), Gaps = 3/152 (1%)

Query: 47  ANGEIIPSINPS-TGETIASVQQGNVQDYHRCIESSRAAYAA--WAALPAPRRGEIVRQI 103
           A+G  I  ++P   GE + +  + +  D  + + ++R A+ A  W  +    R  ++ ++
Sbjct: 35  ASGSTIDRVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAGPWPRMSGAERSRLMFKV 94

Query: 104 GDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHV 163
            D +  +   L  + SLE+GK +A+  GE+    D+  YA G +R   G    +     +
Sbjct: 95  ADLILARQEELALIESLEVGKPIAQARGEIGFCADLWSYAAGQARALEGQTHNNIGDDRL 154

Query: 164 LLENWNPLGVVGIISAFNFPVAVYGWNAAIAL 195
            L    P+GVVGII+ +NFP  +       A+
Sbjct: 155 GLVLREPVGVVGIITPWNFPFIIASERVPWAI 186

>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} Length = 528

 Score = 80.3 bits (199), Expect = 1e-16
 Identities = 29/125 (23%), Positives = 54/125 (43%), Gaps = 3/125 (2%)

Query: 261 GYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVT 320
           G +  PT+  G+  +  +   E F P++    F + DEA+   N  + GLS+S+++ ++ 
Sbjct: 381 GLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKTADEAVALANATEFGLSASVWSTNLE 440

Query: 321 NLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTIN 380
              +    +    G   +N            GG K +G GRE G   + +Y +   V + 
Sbjct: 441 TALQ--TIRRIRAGRCWINS-VIDGTPELPIGGYKKSGLGRELGRYGFDEYSQFKGVHVT 497

Query: 381 HGKEI 385
            G+  
Sbjct: 498 LGRPA 502

>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} Length = 528

 Score = 50.3 bits (121), Expect = 7e-07
 Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 3/57 (5%)

Query: 209 LELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKKKIDRPGYFVE 265
           LELGG    IV  DADL+ A   + +     AGQ C +  RL + +   D     +E
Sbjct: 269 LELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDA---LME 322

>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} Length = 478

 Score = 94.9 bits (237), Expect = 2e-21
 Identities = 34/150 (22%), Positives = 60/150 (40%), Gaps = 6/150 (4%)

Query: 47  ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDA 106
            + E I  INP+T E I  V +GN  D  + +E++   Y  +       R  ++ +I   
Sbjct: 20  NSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYLEFRHTSVKERQALLDKIVKE 79

Query: 107 LRHKLVPLGQLVSLEMGKILAE-GIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLL 165
             ++   + Q ++ E+G  L+       Q  ++    A      Y       +    V+ 
Sbjct: 80  YENRKDDIVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFEERRGD--DLVVK 137

Query: 166 ENWNPLGVVGIISAFNFPVAVYGWNAAIAL 195
           E    +GV G+I+ +NFP        A A 
Sbjct: 138 E---AIGVSGLITPWNFPTNQTSLKLAAAF 164

>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} Length = 478

 Score = 67.5 bits (166), Expect = 1e-12
 Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 4/118 (3%)

Query: 261 GYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVT 320
           GYF  PTI   + +   +   E F P++ V  ++ LDEAI   N+ K GL+  +  KD  
Sbjct: 361 GYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDLDEAIQIANDTKYGLAGYVIGKDKE 420

Query: 321 NLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVT 378
            L K    +  + G + +N    G +    FGG K +G GRE G    +++    ++ 
Sbjct: 421 TLHKV--ARSIEAGTVEIN--EAGRKPDLPFGGYKQSGLGREWGDYGIEEFLEVKSIA 474

>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} Length = 478

 Score = 50.2 bits (121), Expect = 5e-07
 Identities = 20/73 (27%), Positives = 28/73 (38%), Gaps = 9/73 (12%)

Query: 209 LELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKKKIDRPGYFVE--- 265
           LELGG +  IV +D D+  A +          GQ CT   R+ +  K  D    F+    
Sbjct: 247 LELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDA---FLAELK 303

Query: 266 ---PTIVTGLPHN 275
                +  G P  
Sbjct: 304 EQFSQVRVGNPRE 316

>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* Length = 501

 Score = 94.2 bits (235), Expect = 3e-21
 Identities = 63/297 (21%), Positives = 108/297 (36%), Gaps = 86/297 (28%)

Query: 47  ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAY---AAWAALPAPRRGEIVRQI 103
            +G+  P  NP+T E +  V++G+ +D  + ++++R A+   + W  + A  RG ++ ++
Sbjct: 33  VSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKL 92

Query: 104 GDALRHKLVPLGQLVSLEMGKILAEG-IGEVQEFIDICDYAVGLSRTYSGSILPSERPGH 162
            D +    + L  + ++  GK+ +   + ++   I    Y  G +    G  +P +    
Sbjct: 93  ADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMDGNFF 152

Query: 163 VLLEN-----------WN----------------------------PL------------ 171
               +           WN                            PL            
Sbjct: 153 TYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEA 212

Query: 172 ----GVVGIISAFNFPVAVYGWNAAIAL--------------VG-----VAVQSRFGKLL 208
               GVV I+  +  P A  G  AAI+               VG      A +S   ++ 
Sbjct: 213 GFPPGVVNIVPGYG-PTA--G--AAISSHMDVDKVAFTGSTEVGKLIKEAAGKSNLKRVS 267

Query: 209 LELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKKKIDRPGYFVE 265
           LELGG +  IV  DADL+ A +          GQ C    RLF+ +   D    FV 
Sbjct: 268 LELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDE---FVR 321

>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* Length = 501

 Score = 84.9 bits (211), Expect = 4e-18
 Identities = 39/130 (30%), Positives = 58/130 (44%), Gaps = 3/130 (2%)

Query: 255 KKIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSI 314
                 GYF++PT+ + +  + R+   E F P+  +  F SLD+ I   N    GLS+ I
Sbjct: 373 GPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGI 432

Query: 315 FTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRR 374
           FT D+              G + VN   +       FGG K +G GRE G   + +Y   
Sbjct: 433 FTNDIDKAITV--SSALQSGTVWVNC-YSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEV 489

Query: 375 STVTINHGKE 384
            TVTI   ++
Sbjct: 490 KTVTIKISQK 499

>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... Length = 500

 Score = 93.4 bits (233), Expect = 6e-21
 Identities = 68/297 (22%), Positives = 109/297 (36%), Gaps = 86/297 (28%)

Query: 47  ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAY---AAWAALPAPRRGEIVRQI 103
            + +  P++NPSTGE I  V +G+ +D  + ++++RAA+   + W  + A  RG ++ ++
Sbjct: 32  VSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRL 91

Query: 104 GDALRHKLVPLGQLVSLEMGKILAEG-IGEVQEFIDICDYAVGLSRTYSGSILPSERPGH 162
            D +      L  L +L+ GK      + ++   +    Y  G +  Y G  +P +    
Sbjct: 92  ADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFF 151

Query: 163 VLLEN-----------WN----------------------------PL------------ 171
               +           WN                            PL            
Sbjct: 152 SYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEA 211

Query: 172 ----GVVGIISAFNFPVAVYGWNAAIAL--------------VG-----VAVQSRFGKLL 208
               GVV I+  F  P A  G  AAIA               +G      A  S   ++ 
Sbjct: 212 GFPPGVVNIVPGFG-PTA--G--AAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVT 266

Query: 209 LELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKKKIDRPGYFVE 265
           LELGG +  I+  DAD++ A +   FA     GQ      R F+ +   D    FVE
Sbjct: 267 LELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDE---FVE 320

>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... Length = 500

 Score = 83.8 bits (208), Expect = 1e-17
 Identities = 34/126 (26%), Positives = 56/126 (44%), Gaps = 3/126 (2%)

Query: 255 KKIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSI 314
                 GYF++PT+   +     +   E F P++ +  F +++E +   N    GL++++
Sbjct: 372 GIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAV 431

Query: 315 FTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRR 374
           FTKD+         Q    G + VN   +       FGG K +G GRE G    + Y   
Sbjct: 432 FTKDLDKANYL--SQALQAGTVWVNC-YDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEV 488

Query: 375 STVTIN 380
            TVT+ 
Sbjct: 489 KTVTVK 494

>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} Length = 464

 Score = 91.3 bits (227), Expect = 2e-20
 Identities = 25/136 (18%), Positives = 51/136 (37%), Gaps = 2/136 (1%)

Query: 62  TIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLE 121
           ++      ++Q+    IES+  A    AA+   +   IV+ I DA       L ++   E
Sbjct: 2   SLEDKDLRSIQEVRNLIESANKAQKELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEE 61

Query: 122 MGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFN 181
            G  + +   +V + +    +     +      +  E     ++E   PLGVV  +    
Sbjct: 62  TGFGIWQ--DKVIKNVFASKHVYNYIKDMKTIGMLKEDNEKKVMEVAVPLGVVAGLIPST 119

Query: 182 FPVAVYGWNAAIALVG 197
            P +   +   I++  
Sbjct: 120 NPTSTVIYKTLISIKA 135

>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} Length = 464

 Score = 76.6 bits (189), Expect = 2e-15
 Identities = 35/245 (14%), Positives = 71/245 (28%), Gaps = 65/245 (26%)

Query: 196 VGVAVQSRFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK 255
           +  A  S     +    GN    +   A++  A + ++ +     G  C + + + + + 
Sbjct: 203 MVKAAYSSGTPAIGVGPGNGPAFIERSANIPRAVKHILDSKTFDNGTICASEQSVVVERV 262

Query: 256 KID--------RPGYFVE-------------------PTIV------------TGLPHNS 276
             +        +  +F+                    P IV              +P ++
Sbjct: 263 NKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANLAGLTVPADA 322

Query: 277 RV-------------VHRETFAPIVYVFPFDSLDEAITWNNEVKQ----GLSSSIFTKDV 319
           RV               RE  API+  +  ++  EA   + ++      G +  I ++D 
Sbjct: 323 RVLIAEETKVGAKIPYSREKLAPILAFYTAETWQEACELSMDILYHEGAGHTLIIHSEDK 382

Query: 320 TNLFKWLGPQGSDCGLINVNIPTN----GAEIGGAFGGEKYTG-GGRESGSD--SWKQYC 372
             + +           + VN P      GA            G  G  S SD    +   
Sbjct: 383 EIIRE-FA-LKKPVSRLLVNTPGALGGIGATTNLVPALTLGCGAVGGSSSSDNIGPENLF 440

Query: 373 RRSTV 377
               +
Sbjct: 441 NIRRI 445

>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} Length = 452

 Score = 90.0 bits (224), Expect = 6e-20
 Identities = 23/132 (17%), Positives = 41/132 (31%), Gaps = 2/132 (1%)

Query: 66  VQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKI 125
           +   N+ +    I   + A   +A     +  +I R    A     +PL Q    E G  
Sbjct: 1   MPVTNMAELDAMIARVKKAQEEFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMG 60

Query: 126 LAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVA 185
           + E       F     Y         G +   E      +    P+G++  I     P +
Sbjct: 61  IVEDKVIKNHFASEFIYNKYKDEQTCGIL--EEDDNLGTMTIAEPVGIICGIVPTTNPTS 118

Query: 186 VYGWNAAIALVG 197
              + + I+L  
Sbjct: 119 TAIFKSLISLKT 130

>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} Length = 452

 Score = 78.5 bits (194), Expect = 5e-16
 Identities = 28/214 (13%), Positives = 62/214 (28%), Gaps = 59/214 (27%)

Query: 196 VGVAVQSRFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK 255
           +  A  S     +    GN  ++++E AD+  A   ++ +     G  C + + + +  +
Sbjct: 198 MVKAAYSSGKPAIGVGAGNVPVVIDETADIKRAVASVLMSKTFDNGVVCASEQAVIVVDE 257

Query: 256 -----------------------------------------------------KIDRPGY 262
                                                                K+     
Sbjct: 258 VYDEVKERFASHKAHVLSKTDADKVRKVLLIDGALNAKIVGQPATAIAEMAGVKVPADTK 317

Query: 263 FVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITW----NNEVKQGLSSSIFTKD 318
            +    +  + ++    H E  +P + +F  D+ ++A+            G +S ++T  
Sbjct: 318 VLIGEGLGKVSYDDAFAH-EKLSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSGLYTNQ 376

Query: 319 VTNLFK-WLGPQGSDCGLINVNIPTNGAEIGGAF 351
             N  +            I +NIPT    IG  +
Sbjct: 377 DVNADRIRYFGDKMKTARILINIPTTHGGIGDLY 410

>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* Length = 517

 Score = 89.9 bits (224), Expect = 8e-20
 Identities = 33/155 (21%), Positives = 61/155 (39%), Gaps = 6/155 (3%)

Query: 47  ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAY--AAWAALPAPRRGEIVRQIG 104
              +   +INP+ G  I  V    V D  + + +++ A+    W  + A  RG ++ ++ 
Sbjct: 49  EGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLA 108

Query: 105 DALRHKLVPLGQLVSLEMGKILAEG-IGEVQEFIDICDYAVGLSRTYSGSILPSERPGHV 163
           D +      L  + +L+ G +        V   I    Y  G      G+ +P  +    
Sbjct: 109 DVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPN 168

Query: 164 LLENWN---PLGVVGIISAFNFPVAVYGWNAAIAL 195
                    P+GV GI+  +N+P+ +  W  A  L
Sbjct: 169 RNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACL 203

>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* Length = 517

 Score = 80.7 bits (200), Expect = 9e-17
 Identities = 35/129 (27%), Positives = 64/129 (49%), Gaps = 5/129 (3%)

Query: 255 KKIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPF--DSLDEAITWNNEVKQGLSS 312
            ++ RPG+F +PT+ T +  +  +   E+F PI+ +  F    +D  ++  N  + GL+S
Sbjct: 392 NQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLAS 451

Query: 313 SIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYC 372
            +FT+D+              G + +N   N  ++   FGG K +G G++ G  +  +Y 
Sbjct: 452 GVFTRDINKALYV--SDKLQAGTVFINTY-NKTDVAAPFGGFKQSGFGKDLGEAALNEYL 508

Query: 373 RRSTVTINH 381
           R  TVT  +
Sbjct: 509 RIKTVTFEY 517

>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* Length = 517

 Score = 49.9 bits (120), Expect = 9e-07
 Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 3/67 (4%)

Query: 199 AVQSRFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKKKID 258
              S   K+ LELGG + +I+  D DLN A Q  + +     G+ C    RLF+ +   +
Sbjct: 277 CALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHN 336

Query: 259 RPGYFVE 265
           +   FV+
Sbjct: 337 Q---FVQ 340

>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A Length = 563

 Score = 78.1 bits (193), Expect = 7e-16
 Identities = 34/158 (21%), Positives = 55/158 (34%), Gaps = 9/158 (5%)

Query: 49  GEIIPSINPS-TGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDAL 107
            +I   ++P      +A     +    +R I+++ AA   W   P   R ++  +  D L
Sbjct: 76  SDIQYQLSPFNHAHKVAKFCYADKALLNRAIDAALAARKEWDLKPMADRAQVFLKAADML 135

Query: 108 ----RHKLVPLGQLVSLEMGKILAE-GIGEVQEFIDICDYAVGLSRTYSGSILPSERPGH 162
               R +++       +  GK + +  I    E ID   +    +    G    S  P  
Sbjct: 136 SGPRRAEVLA---KTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPISVPPST 192

Query: 163 VLLENWNPLGVVGIISAFNFPVAVYGWNAAIALVGVAV 200
                    G V  IS FNF         A AL+G  V
Sbjct: 193 NHTVYRGLEGFVAAISPFNFTAIGGNLAGAPALMGNVV 230

>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A Length = 563

 Score = 60.0 bits (146), Expect = 5e-10
 Identities = 28/112 (25%), Positives = 52/112 (46%), Gaps = 4/112 (3%)

Query: 258 DRPGYFVEPTIVTGLPHNSRVVHRETFAPI--VYVFPFDSLDEAITW-NNEVKQGLSSSI 314
           +  GY+VEP I+        ++  E F P+  VYV+P D   E +   ++    GL+ ++
Sbjct: 423 ESVGYYVEPCIIESKDPQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAV 482

Query: 315 FTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGG-AFGGEKYTGGGRESGS 365
           F +D   + +      +  G   +N  + G+ +G   FGG + +G   + G 
Sbjct: 483 FAQDKAIVQEATRMLRNAAGNFYINDKSTGSVVGQQPFGGARASGTNDKPGG 534

>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} PDB: 3szb_A* 1ad3_A* Length = 469

 Score = 59.5 bits (145), Expect = 7e-10
 Identities = 33/162 (20%), Positives = 64/162 (39%), Gaps = 52/162 (32%)

Query: 209 LELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTT---------------------- 246
           LELGG +   V+++ DL++A + + +     +GQ C                        
Sbjct: 225 LELGGKSPCYVDKNCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSL 284

Query: 247 --------------TR--------RL--FLHKKKI------DRPGYFVEPTIVTGLPHNS 276
                          R        R+   +  +K+      D    ++ PTI+T +   S
Sbjct: 285 KEFYGEDAKKSRDYGRIISARHFQRVMGLIEGQKVAYGGTGDAATRYIAPTILTDVDPQS 344

Query: 277 RVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKD 318
            V+  E F P++ +    SL+EAI + N+ ++ L+  +F+ +
Sbjct: 345 PVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSN 386

>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* Length = 457

 Score = 53.9 bits (130), Expect = 4e-08
 Identities = 37/161 (22%), Positives = 55/161 (34%), Gaps = 51/161 (31%)

Query: 209 LELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK------------- 255
           LELGG   +IV  DADL+     L+F     +GQ       L++H               
Sbjct: 235 LELGGKCPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERV 294

Query: 256 -------------------------------------KIDRPGYFVEPTIVTGLPHNSRV 278
                                                + D     +  T+V G+  N  +
Sbjct: 295 KTELPEINSTGKLVTERQVQRLVSLLEATQGQVLVGSQADVSKRALSATVVDGVEWNDPL 354

Query: 279 VHRETFAPIVYVFPFDSLDEAITWNNEVK-QGLSSSIFTKD 318
           +  E F PI+ V  FDS+  AI   N+   + L+  +F KD
Sbjct: 355 MSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKD 395

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 47.5 bits (112), Expect = 7e-06
 Identities = 52/377 (13%), Positives = 103/377 (27%), Gaps = 135/377 (35%)

Query: 23  YPFLKELGLSGSVNPGVYDGTSWKANGEIIPSINPSTGETIASVQQGNVQ---DYHRCIE 79
           Y FL                   K   +  PS+              + Q    Y+    
Sbjct: 91  YKFLMS---------------PIKTE-QRQPSMMTRMYIEQRDRLYNDNQVFAKYNVS-- 132

Query: 80  SSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLE-M---GK-ILAEGIGEV- 133
                           R +   ++  AL  +L P  + V ++ +   GK  +A    +V 
Sbjct: 133 ----------------RLQPYLKLRQALL-ELRP-AKNVLIDGVLGSGKTWVA---LDVC 171

Query: 134 --QEFIDICDYAV-----GLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAV 186
              +     D+ +         +    +   ++  + +  NW          + N  + +
Sbjct: 172 LSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSD----HSSNIKLRI 227

Query: 187 YGWNAAIALVGVAVQSRFGKLLLELGGNNAIIVNED-ADLNLAQ----QC--LVFACCGT 239
                       ++Q+   +LL      N ++V  +  +          C  L+      
Sbjct: 228 -----------HSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILL------ 270

Query: 240 AGQRCTTTRRLFLHKKKIDRPGYFVEPTIVTGLPHNSRVVHRET---FAPIVYVFPFD-- 294
                 TTR     K+  D        T ++   H+  +   E        +   P D  
Sbjct: 271 ------TTR----FKQVTDFLS-AATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLP 319

Query: 295 -----------SL------DEAITWNN-------EVKQGLSSSI---FTKDVTNLFKWLG 327
                      S+      D   TW+N       ++   + SS+      +   +F  L 
Sbjct: 320 REVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLS 379

Query: 328 --PQGSDCGLINVNIPT 342
             P        + +IPT
Sbjct: 380 VFPP-------SAHIPT 389

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	394
2wme_A	490	BADH, betaine aldehyde dehydrogenase; aldehyde oxi	100.0
2j6l_A	500	Aldehyde dehydrogenase family 7 member A1; NAD, re	100.0
3ifg_A	484	Succinate-semialdehyde dehydrogenase (NADP+); niai	100.0
4f3x_A	498	Putative aldehyde dehydrogenase; structural genomi	100.0
3ek1_A	504	Aldehyde dehydrogenase; ssgcid, oxidoreductase, st	100.0
3prl_A	505	NADP-dependent glyceraldehyde-3-phosphate dehydro;	100.0
3ed6_A	520	Betaine aldehyde dehydrogenase; structural genomic	100.0
3k2w_A	497	Betaine-aldehyde dehydrogenase; structural genomic	100.0
3rh9_A	506	Succinate-semialdehyde dehydrogenase (NAD(P)(+));	100.0
3u4j_A	528	NAD-dependent aldehyde dehydrogenase; PSI-biology,	100.0
3iwj_A	503	Putative aminoaldehyde dehydrogenase; rossmann fol	100.0
3jz4_A	481	Succinate-semialdehyde dehydrogenase [NADP+]; tetr	100.0
4e4g_A	521	Methylmalonate-semialdehyde dehydrogenase; structu	100.0
3pqa_A	486	Lactaldehyde dehydrogenase; structural genomics, p	100.0
2d4e_A	515	5-carboxymethyl-2-hydroxymuconate semialdehyde deh	100.0
3qan_A	538	1-pyrroline-5-carboxylate dehydrogenase 1; proline	100.0
2imp_A	479	Lactaldehyde dehydrogenase; protein-lactate-NADH t	100.0
3r31_A	517	BADH, betaine aldehyde dehydrogenase; structural g	100.0
2o2p_A	517	Formyltetrahydrofolate dehydrogenase; aldehyde deh	100.0
1wnd_A	495	Putative betaine aldehyde dehydrogenase; NADH, flu	100.0
3r64_A	508	NAD dependent benzaldehyde dehydrogenase; structur	100.0
1a4s_A	503	ALDH, betaine aldehyde dehydrogenase; oxidoreducta	100.0
4dng_A	485	Uncharacterized aldehyde dehydrogenase ALDY; struc	100.0
1euh_A	475	NADP dependent non phosphorylating glyceraldehyde-	100.0
3i44_A	497	Aldehyde dehydrogenase; oxidoreductase, structural	100.0
1bxs_A	501	Aldehyde dehydrogenase; retinal, class 1, tetramer	100.0
3b4w_A	495	Aldehyde dehydrogenase; RV0223C-NAD complex, struc	100.0
2ve5_A	490	BADH, betaine aldehyde dehydrogenase; aldehyde oxi	100.0
2w8n_A	487	Succinate-semialdehyde dehydrogenase, mitochondria	100.0
1o04_A	500	Aldehyde dehydrogenase, mitochondrial precursor; A	100.0
1uxt_A	501	Glyceraldehyde-3-phosphate dehydrogenase (NADP+);	100.0
1uzb_A	516	1-pyrroline-5-carboxylate dehydrogenase; oxidoredu	100.0
1t90_A	486	MMSDH, probable methylmalonate-semialdehyde dehydr	100.0
3ros_A	484	NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-	100.0
3ty7_A	478	Putative aldehyde dehydrogenase SAV2122; structura	100.0
4h7n_A	474	Aldehyde dehydrogenase; structural genomics, PSI-b	100.0
3etf_A	462	Putative succinate-semialdehyde dehydrogenase; cen	100.0
4e3x_A	563	Delta-1-pyrroline-5-carboxylate dehydrogenase, mit	100.0
3lns_A	457	Benzaldehyde dehydrogenase; oxidoreductase, NADP+,	100.0
3ju8_A	490	Succinylglutamic semialdehyde dehydrogenase; alpha	100.0
4f9i_A	1026	Proline dehydrogenase/delta-1-pyrroline-5-carboxy	100.0
2y53_A	534	Aldehyde dehydrogenase (BOX pathway); oxidoreducta	100.0
3v4c_A	528	Aldehyde dehydrogenase (NADP+); structural genomic	100.0
3sza_A	469	Aldehyde dehydrogenase, dimeric NADP-preferring; A	100.0
1ez0_A	510	ALDH, aldehyde dehydrogenase; nucleotide binding d	100.0
2h5g_A	463	Delta 1-pyrroline-5-carboxylate synthetase; dehydr	100.0
3haz_A	1001	Proline dehydrogenase; proline utilization A, PUTA	100.0
1o20_A	427	Gamma-glutamyl phosphate reductase; TM0293, struct	100.0
1vlu_A	468	Gamma-glutamyl phosphate reductase; YOR323C, struc	100.0
4ghk_A	444	Gamma-glutamyl phosphate reductase; structural gen	100.0
3k9d_A	464	LMO1179 protein, aldehyde dehydrogenase; structura	100.0
3my7_A	452	Alcohol dehydrogenase/acetaldehyde dehydrogenase;	100.0
4gic_A	423	HDH, histidinol dehydrogenase; protein structure i	94.44
1kae_A	434	HDH, histidinol dehydrogenase; L-histidinol dehydr	90.17

>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*

Probab=100.00  E-value=1.1e-82  Score=646.51  Aligned_cols=344  Identities=31%  Similarity=0.525  Sum_probs=319.7

Q ss_pred             CCCceeCCeec--cCCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHH
Q psy3652          36 NPGVYDGTSWK--ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVP  113 (394)
Q Consensus        36 ~~~~~i~G~~~--~~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~  113 (394)
                      ..++||||+|+  .++++++++||+||+++++++.++.+|+++||++|++||+.|+.+|+++|.++|++++++|++++++
T Consensus         6 ~~kl~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~e   85 (490)
T 2wme_A            6 EQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERNDE   85 (490)
T ss_dssp             CBCEECSSSEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred             CCcEEECCeeeCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHH
Confidence            45799999998  4678999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHcCCChHHhHH-HHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHH
Q psy3652         114 LGQLVSLEMGKILAEGIG-EVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAA  192 (394)
Q Consensus       114 l~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~  192 (394)
                      |++++++|+|||+.+++. |+..+++.++|++++++++.++..+.. ++...+++++|+|||++|+|||||+.+.+++++
T Consensus        86 la~~~~~e~Gk~~~ea~~~~v~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~a  164 (490)
T 2wme_A           86 LAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLR-ETSFVYTRREPLGVVAGIGAWNYPVQIALWKSA  164 (490)
T ss_dssp             HHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEEEE-TTEEEEEEEEECSEEEEECCSSSHHHHHHHHHH
T ss_pred             HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhccccccCcccccc-CCcceeEEecceeEEEEeccccCcchhhhhhHH
Confidence            999999999999999975 799999999999999998877665543 456678899999999999999999999999999


Q ss_pred             HHh-----------------------------------------------------------------hHHHHHh-----
Q psy3652         193 IAL-----------------------------------------------------------------VGVAVQS-----  202 (394)
Q Consensus       193 ~aL-----------------------------------------------------------------~g~~i~~-----  202 (394)
                      +||                                                                 +|+.+.+     
T Consensus       165 ~ALaaGNtVVlKPse~tp~ta~~l~~l~~eaGlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~~a~~  244 (490)
T 2wme_A          165 PALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSS  244 (490)
T ss_dssp             HHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHH
T ss_pred             HHHHcCCeEEEECCcCCHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHhCCCCCEEEEECChHHHHHHHHhhhcc
Confidence            999                                                                 7766643     


Q ss_pred             hhhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc---------------------------
Q psy3652         203 RFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK---------------------------  255 (394)
Q Consensus       203 ~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~---------------------------  255 (394)
                      ++||++||||||||+||++|||++.|++.+++++|.|+||.|++++|||||++                           
T Consensus       245 ~lk~v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vGdp~~~~~~  324 (490)
T 2wme_A          245 SLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTN  324 (490)
T ss_dssp             HCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCC
T ss_pred             CCceEEEEcCCcCeEEEccCccHHHHHHHHHHHHhccCCCcCCCceeeccchhHHHHHHHHHHHHHHhCcCCCCccccCc
Confidence            56899999999999999999999999999999999999999999999999999                           


Q ss_pred             --------------------------------cC----CCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHH
Q psy3652         256 --------------------------------KI----DRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEA  299 (394)
Q Consensus       256 --------------------------------~~----~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eA  299 (394)
                                                      ..    ...|+|++|||+.+++++|++++||+||||++|++|+|+|||
T Consensus       325 ~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deA  404 (490)
T 2wme_A          325 FGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEA  404 (490)
T ss_dssp             BCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHH
T ss_pred             cCCcCCHHHHHHHHHHHHHHHhcCCEEEECCcccCcccccCCCccCCEEEEcCCCCChhhhccccCCEEEEEEeCCHHHH
Confidence                                            00    125899999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEE
Q psy3652         300 ITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTI  379 (394)
Q Consensus       300 i~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~  379 (394)
                      |+++|+++|||++||||+|.+++++++  .++++|+|+||+.. ...+.+||||+|.||+|+++|.+++++|++.|+|++
T Consensus       405 i~~aN~~~yGL~a~v~t~d~~~a~~~~--~~l~aG~v~iN~~~-~~~~~~PFGG~k~SG~Gre~G~~gl~~ft~~K~v~i  481 (490)
T 2wme_A          405 IRRANDTEYGLAAGVVTQDLARAHRAI--HRLEAGICWINTWG-ESPAEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQV  481 (490)
T ss_dssp             HHHHHCSSCCSEEEEECSBHHHHHHHH--HHSCCSEEEESCCS-CCCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEE
T ss_pred             HHHHhcCCCCCeEEEEcCCHHHHHHHH--HHCCeeEEEEeCCC-CCCCCCCcccccccccCchhHHHHHHHhhceeEEEE
Confidence            999999999999999999999999999  88999999999754 455779999999999999999999999999999999


Q ss_pred             ecCC
Q psy3652         380 NHGK  383 (394)
Q Consensus       380 ~~~~  383 (394)
                      +++.
T Consensus       482 ~~g~  485 (490)
T 2wme_A          482 ELGD  485 (490)
T ss_dssp             ECSC
T ss_pred             ECCC
Confidence            9743

>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*

Probab=100.00  E-value=1.2e-78  Score=619.93  Aligned_cols=366  Identities=65%  Similarity=1.103  Sum_probs=333.1

Q ss_pred             ccccccCCcchhhhhcCCCCCCCCCceeCCeeccCCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCCh
Q psy3652          14 RSYSDSVSKYPFLKELGLSGSVNPGVYDGTSWKANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPA   93 (394)
Q Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~G~~~~~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~   93 (394)
                      ++.+++..++..|++|+.+  ...+.||||+|+.++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.
T Consensus         3 ~~~~~~~~~~~~~~~~~~~--~~~~~~i~g~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~   80 (500)
T 2j6l_A            3 STLLINQPQYAWLKELGLR--EENEGVYNGSWGGRGEVITTYCPANNEPIARVRQASVADYEETVKKAREAWKIWADIPA   80 (500)
T ss_dssp             -CCGGGSGGGGGGGGGTCC--SEEECEESSSEECCSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCH
T ss_pred             cccccccchhHHHHhcCCC--CCCCceECCEEecCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCH
Confidence            3456677778899998855  56778999999977788999999999999999999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeecccee
Q psy3652          94 PRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGV  173 (394)
Q Consensus        94 ~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GV  173 (394)
                      ++|.++|+++++.|++++++|++++++|+|||..++..|+..+++.++|+++.++++.+...+...++...++.++|+||
T Consensus        81 ~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GV  160 (500)
T 2j6l_A           81 PKRGEIVRQIGDALREKIQVLGSLVSLEMGKILVEGVGEVQEYVDICDYAVGLSRMIGGPILPSERSGHALIEQWNPVGL  160 (500)
T ss_dssp             HHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHTTTCCCBEECCSSTTEEEEEEEEECSE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccCCCceeEEEEecccE
Confidence            99999999999999999999999999999999999999999999999999999887776654443344556778999999


Q ss_pred             EEEEccCCchhHhHHHHHHHHh----------------------------------------------------------
Q psy3652         174 VGIISAFNFPVAVYGWNAAIAL----------------------------------------------------------  195 (394)
Q Consensus       174 V~~I~p~N~P~~~~~~~~~~aL----------------------------------------------------------  195 (394)
                      |++|+|||||+.+.++++++||                                                          
T Consensus       161 v~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~g~~L~~~~~v  240 (500)
T 2j6l_A          161 VGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCGGADIGTAMAKDERV  240 (500)
T ss_dssp             EEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEEECCSHHHHHHHHHCTTC
T ss_pred             EEEECCCcchhhHHHHHHHHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHhhcCCcCeEEEEeCCHHHHHHHhcCCCc
Confidence            9999999999999999999999                                                          


Q ss_pred             ----------hHHHHHh----hhhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc------
Q psy3652         196 ----------VGVAVQS----RFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK------  255 (394)
Q Consensus       196 ----------~g~~i~~----~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~------  255 (394)
                                +|+.|++    ++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++      
T Consensus       241 d~I~FTGS~~~g~~i~~~aa~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~  320 (500)
T 2j6l_A          241 NLLSFTGSTQVGKQVGLMVQERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVV  320 (500)
T ss_dssp             SEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEETTTHHHHH
T ss_pred             CEEEEECCHHHHHHHHHHhccCCCceEEEcCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCcCCCcEEEEcHHHHHHHH
Confidence                      7777765    46899999999999999999999999999999999999999999999999999      


Q ss_pred             -----------------------------------------------------cCCCCCceecCeEEEcCCCCCcccccc
Q psy3652         256 -----------------------------------------------------KIDRPGYFVEPTIVTGLPHNSRVVHRE  282 (394)
Q Consensus       256 -----------------------------------------------------~~~~~g~~~~Ptvl~~v~~~~~i~~eE  282 (394)
                                                                           ..+..|+|++|||+.+++++|++++||
T Consensus       321 ~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~eE  400 (500)
T 2j6l_A          321 NRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHDASIAHTE  400 (500)
T ss_dssp             HHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSSCBCCEEEESCCTTCHHHHSC
T ss_pred             HHHHHHhhhcccCCcccCCCccccCCCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCCEEcCEEEECCCCcChhhcCc
Confidence                                                                 001248899999999999999999999


Q ss_pred             cccceEEEEeeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCC
Q psy3652         283 TFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRE  362 (394)
Q Consensus       283 ~FGPvl~v~~~~~~~eAi~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~  362 (394)
                      +||||++|++|+|+||||+++|+++|||++||||+|.+++++++.+.++++|+|+||++.....+.+||||+|.||+|++
T Consensus       401 iFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~V~vN~~~~~~~~~~PfGG~k~SG~G~~  480 (500)
T 2j6l_A          401 TFAPILYVFKFQNEEEVFAWNNEVKQGLSSSIFTKDLGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRE  480 (500)
T ss_dssp             CSSSEEEEEEECCHHHHHHHHHTSSCCSEEEEECCCHHHHHHHHSTTSCCSSEEEESSCTTCCCTTSEECCSGGGCSCCE
T ss_pred             ccCceEEEEeeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHhhccCCeeEEEECCCCccCCCCCCcCCcCCCCCCCc
Confidence            99999999999999999999999999999999999999999999444599999999986555567899999999999999


Q ss_pred             chHHHHHhhhheeEEEEec
Q psy3652         363 SGSDSWKQYCRRSTVTINH  381 (394)
Q Consensus       363 ~g~~~l~~f~~~k~v~~~~  381 (394)
                      +|.+++++|++.|+|++++
T Consensus       481 ~g~~~~~~f~~~k~v~~~~  499 (500)
T 2j6l_A          481 SGSDAWKQYMRRSTCTINY  499 (500)
T ss_dssp             ESTTGGGGGEEEEEEEEEC
T ss_pred             chHHHHHHhhceEEEEEeC
Confidence            9999999999999998864

>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q

Probab=100.00  E-value=7.5e-79  Score=618.68  Aligned_cols=342  Identities=28%  Similarity=0.479  Sum_probs=318.6

Q ss_pred             CCCceeCCeec--cCCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHH
Q psy3652          36 NPGVYDGTSWK--ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVP  113 (394)
Q Consensus        36 ~~~~~i~G~~~--~~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~  113 (394)
                      ..++||||+|+  .++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|++++++|++++++
T Consensus        12 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e   91 (484)
T 3ifg_A           12 RHQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWAGWRMKTAKERAAILRRWFDLVIANSDD   91 (484)
T ss_dssp             CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred             ccceeECCEEeeCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence            45689999997  3678999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHH
Q psy3652         114 LGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAI  193 (394)
Q Consensus       114 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~  193 (394)
                      |++++++|+|||..+++.|+..+++.++|+++..+++.+...+...++...++.++|+|||++|+|||||+.+.++++++
T Consensus        92 la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~  171 (484)
T 3ifg_A           92 LALILTTEQGKPLAEAKGEIAYAASFIEWFAEEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGP  171 (484)
T ss_dssp             HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECSSEEEECCSSSTTHHHHHHHHH
T ss_pred             HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccCCCceeEEEecCCcEEEEECCCcChHHHHHHHHHH
Confidence            99999999999999999999999999999999988877665554434667788999999999999999999999999999


Q ss_pred             Hh-----------------------------------------------------------------hHHHHHh----hh
Q psy3652         194 AL-----------------------------------------------------------------VGVAVQS----RF  204 (394)
Q Consensus       194 aL-----------------------------------------------------------------~g~~i~~----~~  204 (394)
                      ||                                                                 +|+.|++    ++
T Consensus       172 ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS~~~G~~i~~~aa~~~  251 (484)
T 3ifg_A          172 ALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSAPTV  251 (484)
T ss_dssp             HHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTGGGT
T ss_pred             HHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhccC
Confidence            99                                                                 7788765    46


Q ss_pred             hhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc-----------------------------
Q psy3652         205 GKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK-----------------------------  255 (394)
Q Consensus       205 ~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~-----------------------------  255 (394)
                      ||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++                             
T Consensus       252 k~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~G  331 (484)
T 3ifg_A          252 KKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRGTESGATLG  331 (484)
T ss_dssp             CEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBC
T ss_pred             CceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCC
Confidence            899999999999999999999999999999999999999999999999999                             


Q ss_pred             ------------------------------cCCCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhc
Q psy3652         256 ------------------------------KIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNE  305 (394)
Q Consensus       256 ------------------------------~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~  305 (394)
                                                    ..+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+
T Consensus       332 pli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~  411 (484)
T 3ifg_A          332 PLINEAAVKKVESHIADALAKGASLMTGGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLAND  411 (484)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHC
T ss_pred             CCcCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCceEcCEEEecCCCCChhhCCeeeCcEEEEEEeCCHHHHHHHHhC
Confidence                                          00126899999999999999999999999999999999999999999999


Q ss_pred             CCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEEe
Q psy3652         306 VKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTIN  380 (394)
Q Consensus       306 ~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~~  380 (394)
                      ++|||+++|||+|.+++++++  .++++|+|+||++. ...+.+||||+|.||+|+++|.+++++|++.|+|++.
T Consensus       412 ~~~GL~a~v~t~d~~~a~~~~--~~l~aG~v~iN~~~-~~~~~~PfGG~k~SG~Gr~~g~~gl~~~~~~k~v~~~  483 (484)
T 3ifg_A          412 TEFGLAAYLYSRDIGRVWRVA--EALEYGMVGINTGL-ISNEVAPFGGVKQSGLGREGSHYGIDDYVVIKYLCVA  483 (484)
T ss_dssp             SSEESEEEEECCBHHHHHHHH--HHCCCSEEEESCSC-CCCSSSCBCCEETTEECCBSTTTTTGGGEEEEEEEEE
T ss_pred             CCCCceEEEECCCHHHHHHHH--HhCCcceEEEcCCC-CCCCCCCcCCcCcCcCCCCchHHHHHHhhceEEEEEe
Confidence            999999999999999999999  88999999999854 4567899999999999999999999999999999864

>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*

Probab=100.00  E-value=1.1e-78  Score=619.20  Aligned_cols=343  Identities=27%  Similarity=0.463  Sum_probs=317.7

Q ss_pred             CCCceeCCeeccCCC-eeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHH
Q psy3652          36 NPGVYDGTSWKANGE-IIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPL  114 (394)
Q Consensus        36 ~~~~~i~G~~~~~~~-~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l  114 (394)
                      ..++||||+|+.+.. +++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|++++++|++++++|
T Consensus        25 ~~~~~I~G~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el  104 (498)
T 4f3x_A           25 DTQLLIGSRFEAGTEAEEHILNPRTGAGIIDLAEASHAQIDAAVDAAERAFVGWSQTTPAERSNALLKIADAIEKEADEF  104 (498)
T ss_dssp             CCCEEETTEEECCCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred             ccCeeECCEEeeCCCCeEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHH
Confidence            467899999984322 8999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHcCCChHHh-HHHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHH
Q psy3652         115 GQLVSLEMGKILAEG-IGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAI  193 (394)
Q Consensus       115 ~~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~  193 (394)
                      ++++++|+|||..++ +.|+..+++.++|+++.++++.+...+...++...++.++|+|||++|+|||||+.+.++++++
T Consensus       105 a~~~~~e~Gk~~~ea~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~  184 (498)
T 4f3x_A          105 AALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLHAPAAGEYLPGHTSMIRRDPIGIVGSIAPWNYPLMMMAWKLAP  184 (498)
T ss_dssp             HHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHH
T ss_pred             HHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCcccccceEEEcCcceEEEECCCchHHHHHHHHHHH
Confidence            999999999999999 8899999999999999998876665443334566788999999999999999999999999999


Q ss_pred             Hh----------------------------------------------------------------hHHHHHh----hhh
Q psy3652         194 AL----------------------------------------------------------------VGVAVQS----RFG  205 (394)
Q Consensus       194 aL----------------------------------------------------------------~g~~i~~----~~~  205 (394)
                      ||                                                                +|+.|++    ++|
T Consensus       185 ALaaGNtVVlKPs~~tp~t~~~l~~l~~ealP~gv~nvv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~~k  264 (498)
T 4f3x_A          185 AIGGGNTVVFKPSEQTPLTALKLARLIADILPEGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKKVLAAAAKTVK  264 (498)
T ss_dssp             HHHTTCEEEEECCTTCCHHHHHHHHHHHTTSCTTSEEECCCCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHTTTC
T ss_pred             HHHcCCeEEEECCcccHHHHHHHHHHHHHhCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHHhhCC
Confidence            99                                                                6787765    568


Q ss_pred             hhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc------------------------------
Q psy3652         206 KLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK------------------------------  255 (394)
Q Consensus       206 ~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~------------------------------  255 (394)
                      |+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++                              
T Consensus       265 ~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~d~~~~~Gp  344 (498)
T 4f3x_A          265 RTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIRYNLDDDTENEIGP  344 (498)
T ss_dssp             EEEEECCCCEEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHTTCCCSCSSGGGCSSCC
T ss_pred             ceeecCCCCCcEEECCCCCHHHHHHHHHHHHHhcCCCCccCCceEEecHHHHHHHHHHHHHHHHhcccCCCccccCcccc
Confidence            99999999999999999999999999999999999999999999999999                              


Q ss_pred             ---------------------c---------CCCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhc
Q psy3652         256 ---------------------K---------IDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNE  305 (394)
Q Consensus       256 ---------------------~---------~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~  305 (394)
                                           .         .+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+
T Consensus       345 li~~~~~~~v~~~i~~a~~~Ga~~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~  424 (498)
T 4f3x_A          345 LISRRQRDRVASFVERAADQKHIEITTGGRTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAWAND  424 (498)
T ss_dssp             CSCHHHHHHHHHHHHHHHHSTTCEEEECCSBCCSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECTTSCHHHHHHS
T ss_pred             CcCHHHHHHHHHHHHHHHHCCCCEEEECCccCCCCCcEECCEEeecCCCCChhhCCceeCcEEEEEEeCCHHHHHHHHhc
Confidence                                 0         0125899999999999999999999999999999999999999999999


Q ss_pred             CCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEEec
Q psy3652         306 VKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTINH  381 (394)
Q Consensus       306 ~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~~~  381 (394)
                      ++|||++||||+|.+++++++  .++++|+|+||++... .+.+||||+|.||+|+++|.+++++|++.|+|++++
T Consensus       425 ~~~GL~a~v~t~d~~~a~~~a--~~l~aG~V~vN~~~~~-~~~~PfGG~k~SG~Gr~~G~~~l~~~t~~k~v~~~~  497 (498)
T 4f3x_A          425 SDYGLASSVWTKDISKAMRAA--SRLQYGCTWINTHFML-TNEMPHGGIKQSGYGKDMSVYALEDYTAVRHIMINH  497 (498)
T ss_dssp             SSCCSEEEEECSBHHHHHHHH--HHCCSSEEEESCCSCC-CTTSCBCCSGGGEECCBSHHHHHHHTEEEEEEEEEC
T ss_pred             CCCCceEEEECCCHHHHHHHH--HhCCcceEEEcCCCCC-CCCCCcCCcCcCCcCccchHHHHHHhhceEEEEEeC
Confidence            999999999999999999999  8899999999987544 478999999999999999999999999999998875

>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}

Probab=100.00  E-value=1.3e-78  Score=618.91  Aligned_cols=344  Identities=28%  Similarity=0.444  Sum_probs=319.7

Q ss_pred             CCCceeCCeecc--CCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHH
Q psy3652          36 NPGVYDGTSWKA--NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVP  113 (394)
Q Consensus        36 ~~~~~i~G~~~~--~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~  113 (394)
                      ..++||||+|+.  ++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|++++++|++++++
T Consensus        32 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e  111 (504)
T 3ek1_A           32 KSQCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALSGWAAKTAKERAGILRKWFDLIIANADD  111 (504)
T ss_dssp             CSSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred             ccCeEECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence            356899999973  678999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHH
Q psy3652         114 LGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAI  193 (394)
Q Consensus       114 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~  193 (394)
                      |++++++|+|||..+++.|+..+++.++|++++.+++.+...+...++...++.++|+|||++|+|||||+.+.++++++
T Consensus       112 la~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~  191 (504)
T 3ek1_A          112 IALIMTSEQGKPLAEARGEVLYAASFIEWFAEEAKRVYGDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAP  191 (504)
T ss_dssp             HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHH
T ss_pred             HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccceeeccCceEEEEECCCcchHHHHHHHHHH
Confidence            99999999999999999999999999999999988877665554445667788999999999999999999999999999


Q ss_pred             Hh-----------------------------------------------------------------hHHHHHh----hh
Q psy3652         194 AL-----------------------------------------------------------------VGVAVQS----RF  204 (394)
Q Consensus       194 aL-----------------------------------------------------------------~g~~i~~----~~  204 (394)
                      ||                                                                 +|+.|++    ++
T Consensus       192 ALaaGN~VVlKPs~~tp~t~~~l~~l~~eaGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~l  271 (504)
T 3ek1_A          192 ALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCAPTI  271 (504)
T ss_dssp             HHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTTEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGGGT
T ss_pred             HHHcCCEEEEECCCcChHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhhhc
Confidence            99                                                                 7777765    45


Q ss_pred             hhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc-----------------------------
Q psy3652         205 GKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK-----------------------------  255 (394)
Q Consensus       205 ~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~-----------------------------  255 (394)
                      ||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++                             
T Consensus       272 k~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~G  351 (504)
T 3ek1_A          272 KRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNGTEPGVVIG  351 (504)
T ss_dssp             CEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCCBC
T ss_pred             CCeEecCCCCCeeEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEehhHHHHHHHHHHHHHhhcccCCCccccCccc
Confidence            899999999999999999999999999999999999999999999999999                             


Q ss_pred             -------------------------cCC---CCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcCC
Q psy3652         256 -------------------------KID---RPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVK  307 (394)
Q Consensus       256 -------------------------~~~---~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~  307 (394)
                                               ...   ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++
T Consensus       352 pli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~  431 (504)
T 3ek1_A          352 PMIEEKAITKVKAHIEDAVSKGAKLITGGKELGGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQANDTI  431 (504)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHTTCEEEECCCEEETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSS
T ss_pred             cccCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCceECCeEEecCCCcChhhcccccCcEEEEEEeCCHHHHHHHHhCCC
Confidence                                     001   1479999999999999999999999999999999999999999999999


Q ss_pred             CCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEEecC
Q psy3652         308 QGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTINHG  382 (394)
Q Consensus       308 ~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~~~~  382 (394)
                      |||++||||+|.+++++++  .++++|+|+||++. ...+.+||||+|.||+|+++|.+++++|++.|+|+++++
T Consensus       432 ~GL~a~v~t~d~~~a~~~a--~~l~aG~V~vN~~~-~~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v~~~~g  503 (504)
T 3ek1_A          432 FGLAAYFYTENFSRAIRVS--EALEYGMVGHNTGL-ISNEVAPFGGVKQSGLGREGSKYGIEEYLETKYICSAYK  503 (504)
T ss_dssp             CCSEEEEECCBHHHHHHHH--HHSCCSEEEESCSC-CCCSSSCBCCSGGGEESCBSTTTSGGGGEEEEEEEEECC
T ss_pred             CCeEEEEEcCCHHHHHHHH--HhCCcCeEEECCCC-CCCCCCCcCCcCcCcCCCCCcHHHHHHhhceEEEEEecC
Confidence            9999999999999999999  88999999999864 456789999999999999999999999999999998753

>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*

Probab=100.00  E-value=2.5e-78  Score=617.39  Aligned_cols=349  Identities=27%  Similarity=0.432  Sum_probs=318.6

Q ss_pred             CCCceeCCeecc--CCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHH
Q psy3652          36 NPGVYDGTSWKA--NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVP  113 (394)
Q Consensus        36 ~~~~~i~G~~~~--~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~  113 (394)
                      ..++||||+|+.  ++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|++++++|++++++
T Consensus        11 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e   90 (505)
T 3prl_A           11 NANILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQKIWKIRPIHERVDLLYAWADLLEERKEI   90 (505)
T ss_dssp             ECCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred             ccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence            356899999973  468999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCcccCCCC-C----CceeEeeeccceeEEEEccCCchhHhHH
Q psy3652         114 LGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSER-P----GHVLLENWNPLGVVGIISAFNFPVAVYG  188 (394)
Q Consensus       114 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~-~----~~~~~~~~~P~GVV~~I~p~N~P~~~~~  188 (394)
                      |++++++|+|||..+++.|+..+++.++|+++.++++.+...+... +    +...++.++|+|||++|+|||||+.+.+
T Consensus        91 la~~~~~e~Gk~~~ea~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~  170 (505)
T 3prl_A           91 IGELIMHEVAKPKKSAIGEVSRTADIIRHTADEALRLNGETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLAA  170 (505)
T ss_dssp             HHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEGGGSTTTCSSEEEEEEEEECSEEEEEECSSSTTHHHH
T ss_pred             HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccccccCCceeEEEEcCCcEEEEECCCccHHHHHH
Confidence            9999999999999999999999999999999998887665443221 2    3456788999999999999999999999


Q ss_pred             HHHHHHh-----------------------------------------------------------------hHHHHHhh
Q psy3652         189 WNAAIAL-----------------------------------------------------------------VGVAVQSR  203 (394)
Q Consensus       189 ~~~~~aL-----------------------------------------------------------------~g~~i~~~  203 (394)
                      +++++||                                                                 +|+.|++.
T Consensus       171 ~~~a~ALaaGN~VVlKpse~tp~ta~~l~~ll~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~  250 (505)
T 3prl_A          171 AKIAPALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERISEK  250 (505)
T ss_dssp             HHHHHHHHTTCEEEEEECSTTHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHTCTTCCEEEEESCHHHHHHHHHH
T ss_pred             HHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHH
Confidence            9999999                                                                 77888764


Q ss_pred             --hhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc----------------c---------
Q psy3652         204 --FGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK----------------K---------  256 (394)
Q Consensus       204 --~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~----------------~---------  256 (394)
                        +||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++                .         
T Consensus       251 aal~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~  330 (505)
T 3prl_A          251 AKMIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVGSPEDDAD  330 (505)
T ss_dssp             CCSSCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTTTCS
T ss_pred             ccCCcEEEECCCCCCCccCCCCCHHHHHHHHHHHHHhcCCCccccCceEEEeHHHHHHHHHHHHHHHHhcccCCCCCcCc
Confidence              4899999999999999999999999999999999999999999999999998                0         


Q ss_pred             ----------------------------C--CCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcC
Q psy3652         257 ----------------------------I--DRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEV  306 (394)
Q Consensus       257 ----------------------------~--~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~  306 (394)
                                                  .  ...|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|++
T Consensus       331 ~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~  410 (505)
T 3prl_A          331 ITPVIDEKSAAFIQGLIDDALENGATLLSGNKRQGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQS  410 (505)
T ss_dssp             BCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCEETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHTS
T ss_pred             CCcccCHHHHHHHHHHHHHHHHCCCEEEecCCCCCceeCCeEeecCCCCChhhcCCccCcEEEEEEeCCHHHHHHHHhCC
Confidence                                        0  1247899999999999999999999999999999999999999999999


Q ss_pred             CCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEEecCCccc
Q psy3652         307 KQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTINHGKEIT  386 (394)
Q Consensus       307 ~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~~~~~~~~  386 (394)
                      +|||++||||+|.+++++++  .++++|+|+||+++....+.+||||+|.||+|+++|.+++++|++.|+|+++++...+
T Consensus       411 ~~gL~a~v~t~d~~~a~~~~--~~l~aG~V~iN~~~~~~~~~~PFGG~k~SG~Gr~~g~~~~~~f~~~k~v~~~~~~~~~  488 (505)
T 3prl_A          411 DYGLQASIFTKDTDRAINIG--KHLEVGTVHINAKTERGPDHFPFLGVKKSGLGVQGIKPSLLSMTRERVTVLNLAENLY  488 (505)
T ss_dssp             SEESEEEEECSCHHHHHHHH--HTSCSSEEEESSCCCSCSTTSCBCCEETTEESCBSHHHHHHHTEEEEEEEEEC-----
T ss_pred             CCCeEEEEEcCCHHHHHHHH--HHCCeeEEEEcCCCCCCCCCCCcCCcCcCCCCcCccHHHHHHhhceEEEEEeCCCccc
Confidence            99999999999999999999  8899999999997655667899999999999999999999999999999998765433

>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*

Probab=100.00  E-value=3.3e-78  Score=618.10  Aligned_cols=344  Identities=29%  Similarity=0.470  Sum_probs=320.5

Q ss_pred             CCCceeCCeecc--CCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHH--HHhhcCChhhHHHHHHHHHHHHhhCH
Q psy3652          36 NPGVYDGTSWKA--NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAY--AAWAALPAPRRGEIVRQIGDALRHKL  111 (394)
Q Consensus        36 ~~~~~i~G~~~~--~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~--~~w~~~~~~~R~~~L~~~a~~l~~~~  111 (394)
                      ..++||||+|+.  ++.+++++||+||+++++++.++.+|+++|+++|++||  +.|+.+|.++|.++|++++++|++++
T Consensus        32 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~  111 (520)
T 3ed6_A           32 SQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFESGEWSQETAETRGKKVRAIADKIKEHR  111 (520)
T ss_dssp             CCSEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHTTTTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred             CCceEECCEEecCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHHhH
Confidence            566899999973  67899999999999999999999999999999999999  88999999999999999999999999


Q ss_pred             HHHHHHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHH
Q psy3652         112 VPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNA  191 (394)
Q Consensus       112 ~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~  191 (394)
                      ++|++++++|+|||..+++.|+..+++.++|+++.++++.+...+...++...++.++|+|||++|+|||||+.+.++++
T Consensus       112 ~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~  191 (520)
T 3ed6_A          112 EALARLETLDTGKTLEESYADMDDIHNVFMYFAGLADKDGGEMIDSPIPDTESKIVKEPVGVVTQITPWNYPLLQASWKI  191 (520)
T ss_dssp             HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHTTSCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCeecccCCCCCcccccccCccEEEEECCCccHHHHHHHHH
Confidence            99999999999999999999999999999999999988777655543345667889999999999999999999999999


Q ss_pred             HHHh-----------------------------------------------------------------hHHHHHh----
Q psy3652         192 AIAL-----------------------------------------------------------------VGVAVQS----  202 (394)
Q Consensus       192 ~~aL-----------------------------------------------------------------~g~~i~~----  202 (394)
                      ++||                                                                 +|+.|++    
T Consensus       192 apALaaGNtVVlKPs~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~~p~vd~V~FTGS~~vG~~i~~~aa~  271 (520)
T 3ed6_A          192 APALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKNAAN  271 (520)
T ss_dssp             HHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHCCCTTSEEECCSCCTTHHHHHHHCTTCSEEEEESCHHHHHHHHHHHHT
T ss_pred             HHHHHcCCEEEEEcCCcchHHHHHHHHHHHHhCCCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhh
Confidence            9999                                                                 7777765    


Q ss_pred             hhhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc---------------------------
Q psy3652         203 RFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK---------------------------  255 (394)
Q Consensus       203 ~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~---------------------------  255 (394)
                      ++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++                           
T Consensus       272 ~l~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~l~vG~p~d~~~~  351 (520)
T 3ed6_A          272 NVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNGFDADTE  351 (520)
T ss_dssp             TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGTSTTCCCEEEEEHHHHHHHHHHHHHHHTTCCBCCTTSTTCS
T ss_pred             cCCCEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCcccCceEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCc
Confidence            56899999999999999999999999999999999999999999999999999                           


Q ss_pred             -------------------------------cCC-----CCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHH
Q psy3652         256 -------------------------------KID-----RPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEA  299 (394)
Q Consensus       256 -------------------------------~~~-----~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eA  299 (394)
                                                     ...     ..|+|++|||+.+++++|++++||+||||++|++|+|+|||
T Consensus       352 ~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deA  431 (520)
T 3ed6_A          352 MGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFETEQEA  431 (520)
T ss_dssp             BCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCCCGGGTTTTCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHH
T ss_pred             ccccCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCccccCCCCceECCeEEecCCCCCccccCceeCcEEEEEEeCCHHHH
Confidence                                           000     35899999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEE
Q psy3652         300 ITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTI  379 (394)
Q Consensus       300 i~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~  379 (394)
                      |+++|+++|||+++|||+|.+++++++  .++++|+|+||+.... .+.+||||+|.||+|+++|.+++++|++.|+|++
T Consensus       432 i~~aN~~~~GL~a~v~t~d~~~a~~~a--~~l~aG~V~iN~~~~~-~~~~PfGG~k~SG~Gre~G~~gl~~~t~~k~v~~  508 (520)
T 3ed6_A          432 IQLANDSIYGLAGAVFSKDIGKAQRVA--NKLKLGTVWINDFHPY-FAQAPWGGYKQSGIGRELGKEGLEEYLVSKHILT  508 (520)
T ss_dssp             HHHHTCSSCCSEEEEECSCHHHHHHHH--HHSCCSEEEESCSCCC-CTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEE
T ss_pred             HHHHhCCCCCcEEEEECCCHHHHHHHH--HHCCcceEEECCCCCC-CCCCCcCCcCcCcCCccchHHHHHHhhceEEEEE
Confidence            999999999999999999999999999  8899999999986544 5789999999999999999999999999999999


Q ss_pred             ecC
Q psy3652         380 NHG  382 (394)
Q Consensus       380 ~~~  382 (394)
                      +++
T Consensus       509 ~~~  511 (520)
T 3ed6_A          509 NTN  511 (520)
T ss_dssp             ESS
T ss_pred             cCC
Confidence            875

>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}

Probab=100.00  E-value=4.3e-78  Score=615.32  Aligned_cols=347  Identities=30%  Similarity=0.471  Sum_probs=321.1

Q ss_pred             CCCCCceeCCeecc--CCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCH
Q psy3652          34 SVNPGVYDGTSWKA--NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKL  111 (394)
Q Consensus        34 ~~~~~~~i~G~~~~--~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~  111 (394)
                      ....++||||+|+.  ++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|++++++|++++
T Consensus        10 ~~~~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~   89 (497)
T 3k2w_A           10 FKNKVNFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQKAWAKLTARTRQNMLRTFANKIRENK   89 (497)
T ss_dssp             CCTTCEEETTEEECCSSCCEEEEECSSSCSEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHTTH
T ss_pred             ccccceeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHH
Confidence            44678999999973  5689999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHH
Q psy3652         112 VPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNA  191 (394)
Q Consensus       112 ~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~  191 (394)
                      ++|++++++|+|||..+++.|+..+++.++|+++.++++.+...+....+...++.++|+|||++|+|||||+.+.++++
T Consensus        90 ~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~  169 (497)
T 3k2w_A           90 HILAPMLVAEQGKLLSVAEMEVDVTATFIDYGCDNALTIEGDILPSDNQDEKIYIHKVPRGVVVGITAWNFPLALAGRKI  169 (497)
T ss_dssp             HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHTTTTCCEEEEECSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCceEEEECCCccHHHHHHHHH
Confidence            99999999999999999999999999999999999988876655443345667889999999999999999999999999


Q ss_pred             HHHh-----------------------------------------------------------------hHHHHHh----
Q psy3652         192 AIAL-----------------------------------------------------------------VGVAVQS----  202 (394)
Q Consensus       192 ~~aL-----------------------------------------------------------------~g~~i~~----  202 (394)
                      ++||                                                                 +|+.|++    
T Consensus       170 ~~ALaaGN~VVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~G~~i~~~aa~  249 (497)
T 3k2w_A          170 GPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSAE  249 (497)
T ss_dssp             HHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCSCTTTHHHHHHHCSSEEEEEEESCHHHHHHHHHHHTT
T ss_pred             HHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhh
Confidence            9999                                                                 6788775    


Q ss_pred             hhhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc---------------------------
Q psy3652         203 RFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK---------------------------  255 (394)
Q Consensus       203 ~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~---------------------------  255 (394)
                      ++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++                           
T Consensus       250 ~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~  329 (497)
T 3k2w_A          250 YMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDPMDADSQ  329 (497)
T ss_dssp             TTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTSEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCS
T ss_pred             cCCCeEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhCCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCc
Confidence            45899999999999999999999999999999999999999999999999999                           


Q ss_pred             -------------------------------c--C-CC--CCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHH
Q psy3652         256 -------------------------------K--I-DR--PGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEA  299 (394)
Q Consensus       256 -------------------------------~--~-~~--~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eA  299 (394)
                                                     .  . +.  .|+|+.|||+.+++++|++++||+||||++|++|+|+|||
T Consensus       330 ~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deA  409 (497)
T 3k2w_A          330 MGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVSSMEQA  409 (497)
T ss_dssp             BCCCSCHHHHHHHHHHHHHHHHHHCEEEECCC---------CCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHH
T ss_pred             cccCcCHHHHHHHHHHHHHHHHCCCEEEecCccCCccccCCCceeCCEEEecCCCCcHhhcCCccCcEEEEEEeCCHHHH
Confidence                                           0  0 01  5899999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEE
Q psy3652         300 ITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTI  379 (394)
Q Consensus       300 i~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~  379 (394)
                      |+++|+++|||++||||+|.+++++++  .++++|+|+||+++.. .+.+||||+|.||+|+++|.+++++|++.|+|++
T Consensus       410 i~~aN~~~~gL~a~v~t~d~~~a~~~~--~~l~aG~v~vN~~~~~-~~~~PfGG~k~SG~G~~~G~~gl~~ft~~k~v~~  486 (497)
T 3k2w_A          410 IEFCNDSIYGLSAYVHTQSFANINQAI--SDLEVGEVYINRGMGE-QHQGFHNGWKQSGFGGEDGKFGLEQYLEKKTVYI  486 (497)
T ss_dssp             HHHHTCSSEESEEEEECSBHHHHHHHH--HHCCSSEEEESCCSCC-CTTSCBCCEETSEESCBSHHHHHHTTEEEEEEEE
T ss_pred             HHHHhcCCCCcEEEEEcCCHHHHHHHH--HhCCeeEEEEcCCCCC-CCCCCcCCcCCCcCCccchHHHHHHhcceEEEEE
Confidence            999999999999999999999999999  8899999999987544 4789999999999999999999999999999999


Q ss_pred             ecCC
Q psy3652         380 NHGK  383 (394)
Q Consensus       380 ~~~~  383 (394)
                      +++.
T Consensus       487 ~~~~  490 (497)
T 3k2w_A          487 NEAE  490 (497)
T ss_dssp             ECCC
T ss_pred             Eccc
Confidence            8754

>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}

Probab=100.00  E-value=5.1e-78  Score=614.82  Aligned_cols=343  Identities=30%  Similarity=0.473  Sum_probs=318.5

Q ss_pred             CCCceeCCeecc--CCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHH
Q psy3652          36 NPGVYDGTSWKA--NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVP  113 (394)
Q Consensus        36 ~~~~~i~G~~~~--~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~  113 (394)
                      ..++||||+|+.  ++++++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|++++++|++++++
T Consensus        11 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e   90 (506)
T 3rh9_A           11 NLTGYIGGRWKDSAGGATFDVYNPATGSVIAKVPSMPEEDVVAAVEAGQSALRLTNPWPIETRRKWLEDIRDGLKENREE   90 (506)
T ss_dssp             CCSEEETTEEECCCTTCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHCCSSSCCCHHHHHHHHHHHHHHHHHTHHH
T ss_pred             ccCeeECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHH
Confidence            457899999983  678999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeee-ccceeEEEEccCCchhHhHHHHHH
Q psy3652         114 LGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENW-NPLGVVGIISAFNFPVAVYGWNAA  192 (394)
Q Consensus       114 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~-~P~GVV~~I~p~N~P~~~~~~~~~  192 (394)
                      |++++++|+|||..+++.|+..+++.++|+++.++++.+...+.. .+...++.+ +|+|||++|+|||||+.+.+++++
T Consensus        91 la~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a  169 (506)
T 3rh9_A           91 IGRILCMEHGKPWKEAQGEVDYAAGFFDYCAKHISALDSHTIPEK-PKDCTWTVHYRPVGVTGLIVPWNFPIGMIAKKLS  169 (506)
T ss_dssp             HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGGCCEECSCC-GGGCEEEEEEEECCSEEEECCSSSTTHHHHHHHH
T ss_pred             HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccC-CCceeeEeecccceEEEEECCCchHHHHHHHHHH
Confidence            999999999999999999999999999999999998877655433 345667788 999999999999999999999999


Q ss_pred             HHh-----------------------------------------------------------------hHHHHHh----h
Q psy3652         193 IAL-----------------------------------------------------------------VGVAVQS----R  203 (394)
Q Consensus       193 ~aL-----------------------------------------------------------------~g~~i~~----~  203 (394)
                      +||                                                                 +|+.|++    +
T Consensus       170 ~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~vG~~i~~~aa~~  249 (506)
T 3rh9_A          170 AALAAGCPSVIKPASETPLTMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVDTAEQ  249 (506)
T ss_dssp             HHHHHTCCEEEECCTTSCHHHHHHHHHHTTTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTTTT
T ss_pred             HHHHcCCEEEEEcCCccHHHHHHHHHHHHHhCcChhhEEEEeCCChHHHHHHHhCCCCCEEEEECCHHHHHHHHHHhhhc
Confidence            999                                                                 7788775    4


Q ss_pred             hhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc----------------------------
Q psy3652         204 FGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK----------------------------  255 (394)
Q Consensus       204 ~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~----------------------------  255 (394)
                      +||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++                            
T Consensus       250 l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~  329 (506)
T 3rh9_A          250 VKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKLAERVNKMTVGDGMNDGIDI  329 (506)
T ss_dssp             TCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSSSSCCEEEEETTTHHHHHHHHHHHHHHCCBSCTTSTTCSB
T ss_pred             CCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhccCCCCcccCCcc
Confidence            6899999999999999999999999999999999999999999999999999                            


Q ss_pred             -------------------------------cCCC-CCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHH
Q psy3652         256 -------------------------------KIDR-PGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWN  303 (394)
Q Consensus       256 -------------------------------~~~~-~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~  303 (394)
                                                     ..+. .|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++
T Consensus       330 Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~a  409 (506)
T 3rh9_A          330 GPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTEEEVIDAG  409 (506)
T ss_dssp             CCCSCHHHHHHHHHHHHHHHHTTCEEEESCCGGGCCSSSCCCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHH
T ss_pred             cccCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCCCcEECCeEEccCCCCChhhcccccCcEEEEEEeCCHHHHHHHH
Confidence                                           0011 68999999999999999999999999999999999999999999


Q ss_pred             hcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEEecC
Q psy3652         304 NEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTINHG  382 (394)
Q Consensus       304 n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~~~~  382 (394)
                      |+++|||++||||+|.+++++++  .++++|+|+||+++. ..+.+||||+|.||+|+++|++++++|++.|+|+++..
T Consensus       410 N~~~~gLaa~v~t~d~~~a~~~~--~~l~aG~V~vN~~~~-~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~K~v~~~~~  485 (506)
T 3rh9_A          410 NDTEFGLASYVFTADAERAQRVA--AGLRFGHVGWNTGTG-PTPEAPFGGMKASGIGREGGLEGLFEFVEAQTVPRGFA  485 (506)
T ss_dssp             TCSSCCSEEEEECSCHHHHHHHH--HHCCCSEEEESCCCC-CCTTSCBCCSGGGEESCBSHHHHHTTTEEEEEEEEC--
T ss_pred             hCCCCCceEEEEcCCHHHHHHHH--HhCCcceEEEcCCCC-CCCCCCccCcCcCcCCcCccHHHHHHhcceEEEEEcCc
Confidence            99999999999999999999999  889999999998754 45679999999999999999999999999999988753

>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}

Probab=100.00  E-value=1e-77  Score=615.51  Aligned_cols=345  Identities=26%  Similarity=0.460  Sum_probs=320.7

Q ss_pred             CCCceeCCeecc--CCCeeeeecCCC-CCeEEEEeCCCHHHHHHHHHHHHHHH--HHhhcCChhhHHHHHHHHHHHHhhC
Q psy3652          36 NPGVYDGTSWKA--NGEIIPSINPST-GETIASVQQGNVQDYHRCIESSRAAY--AAWAALPAPRRGEIVRQIGDALRHK  110 (394)
Q Consensus        36 ~~~~~i~G~~~~--~~~~~~v~nP~t-g~~i~~v~~a~~~~v~~av~aA~~A~--~~w~~~~~~~R~~~L~~~a~~l~~~  110 (394)
                      ..++||||+|+.  ++.+++++||+| |+++++++.++.+|+++|+++|++||  +.|+.++.++|.++|++++++|+++
T Consensus        22 ~~~~~I~G~~~~~~~~~~~~v~nP~t~g~~i~~~~~~~~~dv~~av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~  101 (528)
T 3u4j_A           22 RYQMLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAGPWPRMSGAERSRLMFKVADLILAR  101 (528)
T ss_dssp             BCCEEETTEEECCTTCCEEEEECTTSTTCEEEEEECCCHHHHHHHHHHHHHHHHTSSGGGSCHHHHHHHHHHHHHHHHHT
T ss_pred             ccceeECCEEecCCCCCEEEEeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHHH
Confidence            467999999983  578999999999 99999999999999999999999999  7899999999999999999999999


Q ss_pred             HHHHHHHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHH
Q psy3652         111 LVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWN  190 (394)
Q Consensus       111 ~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~  190 (394)
                      +++|++++++|+|||..++..|+..+++.++|+++.++++.+...+....+...++.++|+|||++|+|||||+.+.+++
T Consensus       102 ~~ela~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~  181 (528)
T 3u4j_A          102 QEELALIESLEVGKPIAQARGEIGFCADLWSYAAGQARALEGQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFIIASER  181 (528)
T ss_dssp             HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCSCTTEEEEEEEEECCEEEEECCSSSHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCeeeccCCCCceeEEEeccceEEEEECCCccHHHHHHHH
Confidence            99999999999999999999999999999999999998877665554334566788999999999999999999999999


Q ss_pred             HHHHh-----------------------------------------------------------------hHHHHHh---
Q psy3652         191 AAIAL-----------------------------------------------------------------VGVAVQS---  202 (394)
Q Consensus       191 ~~~aL-----------------------------------------------------------------~g~~i~~---  202 (394)
                      +++||                                                                 +|+.|++   
T Consensus       182 ~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa  261 (528)
T 3u4j_A          182 VPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKLGEIAA  261 (528)
T ss_dssp             HHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCSSTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHH
T ss_pred             HHHHHHcCCeEEEEcCCccHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHH
Confidence            99999                                                                 6777764   


Q ss_pred             -hhhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc--------------------------
Q psy3652         203 -RFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK--------------------------  255 (394)
Q Consensus       203 -~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~--------------------------  255 (394)
                       ++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++                          
T Consensus       262 ~~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~  341 (528)
T 3u4j_A          262 RTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALMERLLDISRKVAFGDPLNERT  341 (528)
T ss_dssp             TTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHCCEECTTSTTC
T ss_pred             hcCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHhhcCCCCCcCCCEEEEechHHHHHHHHHHHHHHhhcCCCCCCcCC
Confidence             56899999999999999999999999999999999999999999999999999                          


Q ss_pred             ----------------------------cC-----CC-CCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHH
Q psy3652         256 ----------------------------KI-----DR-PGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAIT  301 (394)
Q Consensus       256 ----------------------------~~-----~~-~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~  301 (394)
                                                  ..     .. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus       342 ~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~  421 (528)
T 3u4j_A          342 KIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKTADEAVA  421 (528)
T ss_dssp             SBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSEECTTTSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHH
T ss_pred             ccCCccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCcEecceEEecCCCCCccccceeeccEEEEEEeCCHHHHHH
Confidence                                        00     01 689999999999999999999999999999999999999999


Q ss_pred             HHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEEec
Q psy3652         302 WNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTINH  381 (394)
Q Consensus       302 ~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~~~  381 (394)
                      ++|+++|||++||||+|.+++++++  .++++|+|+||+++ ...+.+||||+|.||+|+++|.+++++|++.|+|+++.
T Consensus       422 ~aN~~~~GL~a~v~t~d~~~a~~~~--~~l~aG~V~vN~~~-~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~  498 (528)
T 3u4j_A          422 LANATEFGLSASVWSTNLETALQTI--RRIRAGRCWINSVI-DGTPELPIGGYKKSGLGRELGRYGFDEYSQFKGVHVTL  498 (528)
T ss_dssp             HHHCSSCCSEEEEECSBHHHHHHHH--HHSCCSEEEESCCS-CCCTTSCBCCSGGGEESCBSTTHHHHHTEEEEEEEEES
T ss_pred             HHhcCCCCcEEEEEcCCHHHHHHHH--HhCCeeEEEECCCC-CCCCCCCcCCcCcCCCCcCchHHHHHHhhceEEEEEeC
Confidence            9999999999999999999999999  88999999999875 34678999999999999999999999999999999987


Q ss_pred             CC
Q psy3652         382 GK  383 (394)
Q Consensus       382 ~~  383 (394)
                      +.
T Consensus       499 ~~  500 (528)
T 3u4j_A          499 GR  500 (528)
T ss_dssp             SC
T ss_pred             CC
Confidence            63

>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*

Probab=100.00  E-value=3.1e-77  Score=609.83  Aligned_cols=345  Identities=28%  Similarity=0.482  Sum_probs=317.9

Q ss_pred             CCCCceeCCeec--cCCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHH-----HhhcCChhhHHHHHHHHHHHH
Q psy3652          35 VNPGVYDGTSWK--ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYA-----AWAALPAPRRGEIVRQIGDAL  107 (394)
Q Consensus        35 ~~~~~~i~G~~~--~~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~-----~w~~~~~~~R~~~L~~~a~~l  107 (394)
                      ...++||||+|+  .++.+++++||+||+++++++.++.+|+++|+++|++||+     .|+.+|.++|.++|++++++|
T Consensus         6 ~~~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~~~w~~~~~~~R~~~L~~~a~~l   85 (503)
T 3iwj_A            6 PTRQLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWATASGAVRARYLRAIAAKV   85 (503)
T ss_dssp             CCCCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHGGGGTTTTSSCHHHHHHHHHHHHHHH
T ss_pred             CCCceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcCCcchhhCCHHHHHHHHHHHHHHH
Confidence            356799999997  3578999999999999999999999999999999999999     999999999999999999999


Q ss_pred             hhCHHHHHHHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCccc-C--CCCCCceeEeeeccceeEEEEccCCchh
Q psy3652         108 RHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSIL-P--SERPGHVLLENWNPLGVVGIISAFNFPV  184 (394)
Q Consensus       108 ~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~-~--~~~~~~~~~~~~~P~GVV~~I~p~N~P~  184 (394)
                      ++++++|++++++|+|||..+++.|+..+++.++|++++++++.+... +  ....+...++.++|+|||++|+|||||+
T Consensus        86 ~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~  165 (503)
T 3iwj_A           86 TEKKPELAKLESIDCGKPLDEAAWDIDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYPM  165 (503)
T ss_dssp             HHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEECCSCTTEEEEEEEEECCEEEEECCSSSHH
T ss_pred             HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccCCCccceEEEcCCceEEEECCCchHH
Confidence            999999999999999999999999999999999999999887655431 1  1123456788999999999999999999


Q ss_pred             HhHHHHHHHHh-----------------------------------------------------------------hHHH
Q psy3652         185 AVYGWNAAIAL-----------------------------------------------------------------VGVA  199 (394)
Q Consensus       185 ~~~~~~~~~aL-----------------------------------------------------------------~g~~  199 (394)
                      .+.++++++||                                                                 +|+.
T Consensus       166 ~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~  245 (503)
T 3iwj_A          166 LMATWKVAPALAAGCAAILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATGSK  245 (503)
T ss_dssp             HHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCHHHHTHHHHTCTTCCEEEEESCHHHHHH
T ss_pred             HHHHHHHHHHHhcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCcHHHHHHHhhCCCccEEEEECcHHHHHH
Confidence            99999999999                                                                 6777


Q ss_pred             HHh----hhhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc--------------------
Q psy3652         200 VQS----RFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK--------------------  255 (394)
Q Consensus       200 i~~----~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~--------------------  255 (394)
                      |++    ++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++                    
T Consensus       246 i~~~aa~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~  325 (503)
T 3iwj_A          246 IMTAAAQLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEFLNRIVKWIKNIKISD  325 (503)
T ss_dssp             HHHHHGGGTCCEEEECCCCEEEEECSSSCHHHHHHHHHHHHTGGGGCCTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSC
T ss_pred             HHHHHhcCCCCEEEECCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCCcccCCeeEEcHHHHHHHHHHHHHHHHhccCCC
Confidence            765    56799999999999999999999999999999999999999999999999999                    


Q ss_pred             ---------------------------------------cCC--CCCceecCeEEEcCCCCCcccccccccceEEEEeeC
Q psy3652         256 ---------------------------------------KID--RPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFD  294 (394)
Q Consensus       256 ---------------------------------------~~~--~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~  294 (394)
                                                             ..+  ..|+|++|||+.+++++|++++||+||||++|++|+
T Consensus       326 p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~  405 (503)
T 3iwj_A          326 PLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFS  405 (503)
T ss_dssp             TTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCCSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEES
T ss_pred             CCCCCCcccCccCHHHHHHHHHHHHHHHHCCCEEEecCCCCccCCCCceeCCeeeecCCCCchhhCceeeCceEEEEEeC
Confidence                                                   001  368999999999999999999999999999999999


Q ss_pred             CHHHHHHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhhe
Q psy3652         295 SLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRR  374 (394)
Q Consensus       295 ~~~eAi~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~  374 (394)
                      |+||||+++|+++|||++||||+|.+++++++  .++++|+|+||+++ ...+.+||||+|.||+|+++|.+++++|++.
T Consensus       406 ~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~--~~l~aG~v~iN~~~-~~~~~~PfGG~k~SG~G~~~G~~g~~~f~~~  482 (503)
T 3iwj_A          406 TEEEAIDLANDTVYGLGAAVISNDLERCERVT--KAFKAGIVWVNCSQ-PCFTQAPWGGVKRSGFGRELGEWGLDNYLSV  482 (503)
T ss_dssp             SHHHHHHHHTCSSCCSEEEEECSCHHHHHHHH--HHCCSSEEEESSSC-CCCTTSCBCCSGGGEECCBSHHHHHHTTEEE
T ss_pred             CHHHHHHHHhCCCCCcEEEEECCCHHHHHHHH--HhCCcceEEEcCCC-CCCCCCCcCCcCcccCCCcchHHHHHHhhCe
Confidence            99999999999999999999999999999999  88999999999864 4567899999999999999999999999999


Q ss_pred             eEEEEecC
Q psy3652         375 STVTINHG  382 (394)
Q Consensus       375 k~v~~~~~  382 (394)
                      |+|+++..
T Consensus       483 k~v~~~~~  490 (503)
T 3iwj_A          483 KQVTQYIS  490 (503)
T ss_dssp             EEEEEECC
T ss_pred             EEEEEeCC
Confidence            99999864

>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}

Probab=100.00  E-value=5.4e-77  Score=605.59  Aligned_cols=342  Identities=29%  Similarity=0.489  Sum_probs=317.7

Q ss_pred             CCCceeCCeecc--CCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHH
Q psy3652          36 NPGVYDGTSWKA--NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVP  113 (394)
Q Consensus        36 ~~~~~i~G~~~~--~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~  113 (394)
                      ..++||||+|+.  ++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|+++++.|++++++
T Consensus         9 ~~~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~   88 (481)
T 3jz4_A            9 RQQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERATILRNWFNLMMEHQDD   88 (481)
T ss_dssp             CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred             ccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHH
Confidence            356899999973  678999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHH
Q psy3652         114 LGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAI  193 (394)
Q Consensus       114 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~  193 (394)
                      |++++++|+|||..+++.|+..+++.++|+++...+..+...+...++...++.++|+|||++|+|||||+.+.++++++
T Consensus        89 la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~  168 (481)
T 3jz4_A           89 LARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGP  168 (481)
T ss_dssp             HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHH
T ss_pred             HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccCCCceEEEEEcCccEEEEECCCcchHHHHHHHHHH
Confidence            99999999999999999999999999999999887776655554344567788999999999999999999999999999


Q ss_pred             Hh-----------------------------------------------------------------hHHHHHh----hh
Q psy3652         194 AL-----------------------------------------------------------------VGVAVQS----RF  204 (394)
Q Consensus       194 aL-----------------------------------------------------------------~g~~i~~----~~  204 (394)
                      ||                                                                 +|+.|++    ++
T Consensus       169 ALaaGN~VVlKps~~tp~~~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS~~~g~~i~~~aa~~~  248 (481)
T 3jz4_A          169 ALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAKDI  248 (481)
T ss_dssp             HHHHTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCBCTHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHTTTT
T ss_pred             HHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHhhcC
Confidence            99                                                                 6777765    45


Q ss_pred             hhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc-----------------------------
Q psy3652         205 GKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK-----------------------------  255 (394)
Q Consensus       205 ~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~-----------------------------  255 (394)
                      +|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++                             
T Consensus       249 ~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~g  328 (481)
T 3jz4_A          249 KKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGLDNGVTIG  328 (481)
T ss_dssp             CEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBSCTTSTTCCBC
T ss_pred             CceEEecCCCCeEEEcCCCCHHHHHHHHHHHHHHhCCCcccCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCccCcCccc
Confidence            899999999999999999999999999999999999999999999999999                             


Q ss_pred             ------------------------------cCCCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhc
Q psy3652         256 ------------------------------KIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNE  305 (394)
Q Consensus       256 ------------------------------~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~  305 (394)
                                                    ..+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+
T Consensus       329 pli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~  408 (481)
T 3jz4_A          329 PLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQAND  408 (481)
T ss_dssp             CCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHC
T ss_pred             cccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeccEEEecCCCCcccccccccCceEEEEEECCHHHHHHHHhc
Confidence                                          00234799999999999999999999999999999999999999999999


Q ss_pred             CCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEEe
Q psy3652         306 VKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTIN  380 (394)
Q Consensus       306 ~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~~  380 (394)
                      ++|||++||||+|.+++++++  .++++|+|+||++.. ..+.+||||+|.||+|+++|++++++|++.|+|++.
T Consensus       409 ~~~gL~a~v~t~d~~~a~~~~--~~l~~G~v~iN~~~~-~~~~~PfGG~k~SG~G~~~g~~g~~~~t~~k~v~~~  480 (481)
T 3jz4_A          409 TEFGLAAYFYARDLSRVFRVG--EALEYGIVGINTGII-SNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCIG  480 (481)
T ss_dssp             SSCCSEEEEECCBHHHHHHHH--HHCCCSEEEESCSCC-CCSSSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEE
T ss_pred             CCCCceEEEECCCHHHHHHHH--HhCCeeeEEECCCCC-CCCCCCcCCcccCcCCCCchHHHHHHhhceeEEEEe
Confidence            999999999999999999999  889999999998653 567899999999999999999999999999999875

>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}

Probab=100.00  E-value=6.7e-78  Score=616.00  Aligned_cols=348  Identities=24%  Similarity=0.381  Sum_probs=320.1

Q ss_pred             CCCCceeCCeecc--CCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHH
Q psy3652          35 VNPGVYDGTSWKA--NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLV  112 (394)
Q Consensus        35 ~~~~~~i~G~~~~--~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~  112 (394)
                      ...++||||+|+.  ++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|++++++|+++++
T Consensus        25 ~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~  104 (521)
T 4e4g_A           25 YELGHFIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAAQPKWAATNPQRRARVFMKFVQLLNDNMN  104 (521)
T ss_dssp             EEECEEETTEEECCSSSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             hccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHH
Confidence            3467999999973  56899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHH
Q psy3652         113 PLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAA  192 (394)
Q Consensus       113 ~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~  192 (394)
                      +|++++++|+|||..+++.|+..+++.++|+++..+++.+...+...++...++.++|+|||++|+|||||+.+.+++++
T Consensus       105 ela~~~~~e~Gk~~~ea~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a  184 (521)
T 4e4g_A          105 ELAEMLSREHGKTIDDAKGDIVRGLEVCEFVIGIPHLQKSEFTEGAGPGIDMYSIRQPVGIGAGITPFNFPGMIPMWMFA  184 (521)
T ss_dssp             HHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHHTHHHHTCEEEEEEEETTEEEEEEEEECCEEEEECCSSCTTHHHHHHHH
T ss_pred             HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCcEEEEECCCcchHHHHHHHHH
Confidence            99999999999999999999999999999999988777665433222345678899999999999999999999999999


Q ss_pred             HHh----------------------------------------------------------------hHHHHHh----hh
Q psy3652         193 IAL----------------------------------------------------------------VGVAVQS----RF  204 (394)
Q Consensus       193 ~aL----------------------------------------------------------------~g~~i~~----~~  204 (394)
                      +||                                                                +|+.|++    ++
T Consensus       185 ~ALaaGN~VVlKpse~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~~~L~~~p~vd~I~FTGS~~vG~~i~~~aa~~l  264 (521)
T 4e4g_A          185 PAIACGNAFILKPSERDPSVPIRLAELMIEAGLPAGILNVVNGDKGAVDAILTHPDIAAVSFVGSTPIARYVYGTAAMNG  264 (521)
T ss_dssp             HHHHTTCEEEEECCTTSTHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHHTT
T ss_pred             HHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCcCeEEEEeCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHhhcC
Confidence            999                                                                7777765    46


Q ss_pred             hhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc-----------------------------
Q psy3652         205 GKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK-----------------------------  255 (394)
Q Consensus       205 ~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~-----------------------------  255 (394)
                      ||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++                             
T Consensus       265 kpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~vG~~~~~~~~~  344 (521)
T 4e4g_A          265 KRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEETANRLIDKLVPMVESLRIGPYTDEKADM  344 (521)
T ss_dssp             CEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSEEEEEEBSHHHHHHHHHHHHHHHHTCCBCCTTCTTCSB
T ss_pred             CCeeecCCCCCeEEEcCCCCHHHHHHHHHHHHHhCCCCCcccCeEEEEeCchHHHHHHHHHHHHHHhccCCCCCCccCcc
Confidence            899999999999999999999999999999999999999999999999997                             


Q ss_pred             -------------------------------cC----CCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHH
Q psy3652         256 -------------------------------KI----DRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAI  300 (394)
Q Consensus       256 -------------------------------~~----~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi  300 (394)
                                                     ..    +..|+|+.|||+.+++++|++++||+||||++|++|+|+||||
T Consensus       345 gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi  424 (521)
T 4e4g_A          345 GPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTEIFGPVLSVVRARNYEEAL  424 (521)
T ss_dssp             CCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEECCBSSHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHCCCEEEecCcccCCCcCCCCcEECCEEEEcCCCCCHhhcCcccCcEEEEEEeCCHHHHH
Confidence                                           00    1358999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCC--CCchHHHHHhhhheeEEE
Q psy3652         301 TWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGG--RESGSDSWKQYCRRSTVT  378 (394)
Q Consensus       301 ~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G--~~~g~~~l~~f~~~k~v~  378 (394)
                      +++|+++|||++||||+|.+++++++  .++++|+|+||+++....+.+||||+|.||+|  +++|++++++|++.|+|+
T Consensus       425 ~~aN~~~~gLaa~v~t~d~~~a~~~~--~~l~aG~V~vN~~~~~~~~~~PfGG~k~SG~G~~~~~G~~gl~~ft~~K~v~  502 (521)
T 4e4g_A          425 SLPMKHEYGNGVAIYTRDGDAARDFA--SRINIGMVGVNVPIPVPLAYHSFGGWKSSSFGDLNQHGTDSIKFWTRTKTIT  502 (521)
T ss_dssp             HHHHHSSEESEEEEECSBHHHHHHHH--HHCCCSEEEESCSSCCCCTTSCBCCEETTEESSCCBSHHHHHHHTEEEEEEE
T ss_pred             HHHhcCCCCeEEEEECCCHHHHHHHH--HhCCeeeEEECCCCCCCCCCCCcCCcccCCCCCCccchHHHHHHhheEEEEE
Confidence            99999999999999999999999999  88999999999876555577999999999999  799999999999999999


Q ss_pred             EecCCc
Q psy3652         379 INHGKE  384 (394)
Q Consensus       379 ~~~~~~  384 (394)
                      ++++..
T Consensus       503 ~~~~~~  508 (521)
T 4e4g_A          503 SRWPSG  508 (521)
T ss_dssp             ECCCCC
T ss_pred             EecCcc
Confidence            987543

>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A*

Probab=100.00  E-value=2.1e-77  Score=607.89  Aligned_cols=338  Identities=26%  Similarity=0.427  Sum_probs=307.3

Q ss_pred             ceeCCeeccCCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHH
Q psy3652          39 VYDGTSWKANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLV  118 (394)
Q Consensus        39 ~~i~G~~~~~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~  118 (394)
                      +||||+|+.+++ ++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|++++++|++++++|++++
T Consensus         2 ~~I~G~~~~~~~-~~~~nP~tg~~i~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~   80 (486)
T 3pqa_A            2 MFIDGKWINRED-MDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKEVMKNLPITKRYNILMNIAKQIKEKKEELAKIL   80 (486)
T ss_dssp             -------CCCCC-EEEECTTTCCEEEEECCCCHHHHHHHHHHHHHTHHHHHTCCHHHHHHHHHHHHHHHHHTHHHHHHHH
T ss_pred             eeECCEEecCCC-eEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            689999986667 9999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh---
Q psy3652         119 SLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL---  195 (394)
Q Consensus       119 ~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL---  195 (394)
                      ++|+|||..+++.|+..+++.++|+++.++++.+...+..  +...++.++|+|||++|+|||||+.+.++++++||   
T Consensus        81 ~~e~Gk~~~ea~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~--~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaG  158 (486)
T 3pqa_A           81 AIDAGKPIKQARVEVERSIGTFKLAAFYVKEHRDEVIPSD--DRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPAIATG  158 (486)
T ss_dssp             HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCT--TEEEEEEEEECSEEEEEECSSSHHHHHHHHHHHHHHTT
T ss_pred             HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCceecCC--CceeEEEEccccEEEEECCCchHHHHHHHHHHHHHHcC
Confidence            9999999999999999999999999999988776655432  56678899999999999999999999999999999   


Q ss_pred             ------------------------------------------------------------------hHHHHHhh--hhhh
Q psy3652         196 ------------------------------------------------------------------VGVAVQSR--FGKL  207 (394)
Q Consensus       196 ------------------------------------------------------------------~g~~i~~~--~~~~  207 (394)
                                                                                        +|+.|++.  +||+
T Consensus       159 N~VVlKps~~tp~t~~~l~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~fTGS~~~g~~i~~~aa~~~v  238 (486)
T 3pqa_A          159 NVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAGFKKI  238 (486)
T ss_dssp             CEEEEEECTTSCHHHHHHHHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHCCSSEE
T ss_pred             CEEEEECCCCchHHHHHHHHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEEEECChHHHHHHHHHcCCCce
Confidence                                                                              77888763  6899


Q ss_pred             ccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc--------------------------------
Q psy3652         208 LLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK--------------------------------  255 (394)
Q Consensus       208 ~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~--------------------------------  255 (394)
                      ++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++                                
T Consensus       239 ~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli  318 (486)
T 3pqa_A          239 ALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNPLDEKTDVGPLI  318 (486)
T ss_dssp             EEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCS
T ss_pred             eeccCCcCcEEEcCCCCHHHHHHHHHHHHHhcCCCCccCCcEEEEeHHHHHHHHHHHHHHHHhcccCCCCcCCCCcCCCC
Confidence            999999999999999999999999999999999999999999999999                                


Q ss_pred             ----------------------cC--CCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcCCCCcE
Q psy3652         256 ----------------------KI--DRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLS  311 (394)
Q Consensus       256 ----------------------~~--~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~~gLs  311 (394)
                                            ..  ...|+|++|||+ +++++|++++||+||||++|++|+| ||||+++|+++|||+
T Consensus       319 ~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~g~~~~Ptvl-~v~~~~~i~~eEiFGPVl~v~~~~~-deAi~~aN~~~~gL~  396 (486)
T 3pqa_A          319 SVEHAEWVEKVVEKAIDEGGKLLLGGKRDKALFYPTIL-EVDRDNILCKTETFAPVIPIIRTNE-EEMIDIANSTEYGLH  396 (486)
T ss_dssp             CHHHHHHHHHHHHHHHHTTCEEEECCCEETTEECCEEE-ECCTTSGGGTCCCCSSEEEEEEECH-HHHHHHHTCSSCCSE
T ss_pred             CHHHHHHHHHHHHHHHHCCCEEEecCCCCCcEeccEEE-eCCCCChhhcccccccEEEEEEEcH-HHHHHHHhcCCCCcE
Confidence                                  00  124789999999 9999999999999999999999999 999999999999999


Q ss_pred             EEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEEecCC
Q psy3652         312 SSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTINHGK  383 (394)
Q Consensus       312 a~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~~~~~  383 (394)
                      +||||+|.+++++++  .++++|+|+||+++....+.+||||+|.||+|+++|.+++++|++.|+|+++...
T Consensus       397 a~v~t~d~~~a~~~~--~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~Gr~~g~~gl~~f~~~k~v~~~~~~  466 (486)
T 3pqa_A          397 SAIFTNDINKSLKFA--ENLEFGGVVINDSSLFRQDNMPFGGVKKSGLGREGVKYAMEEMSNIKTIIISKAE  466 (486)
T ss_dssp             EEEECSBHHHHHHHH--HHSCSSEEEESSCTTCCCTTSCBCCSGGGEESCBSHHHHHHHTEEEEEEEEEC--
T ss_pred             EEEECCCHHHHHHHH--HhCCcceEEEeCCCCcCCCCCCCCCcCcCcCCCCCcHHHHHHhhceEEEEEcCCc
Confidence            999999999999999  8899999999987543345899999999999999999999999999999998654

>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}

Probab=100.00  E-value=1.1e-76  Score=607.17  Aligned_cols=347  Identities=24%  Similarity=0.422  Sum_probs=319.4

Q ss_pred             CCCceeCCeecc--CCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHH
Q psy3652          36 NPGVYDGTSWKA--NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVP  113 (394)
Q Consensus        36 ~~~~~i~G~~~~--~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~  113 (394)
                      ..++||||+|+.  ++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|++++++|++++++
T Consensus        26 ~~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e  105 (515)
T 2d4e_A           26 PALHFIAGEFVPSESGETFPSLDPATNEVLGVAARGGEREVDRAAKAAHEAFQRWSRTKAKERKRYLLRIAELIEKHADE  105 (515)
T ss_dssp             CBCEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred             ccCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence            356899999983  567899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHH
Q psy3652         114 LGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAI  193 (394)
Q Consensus       114 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~  193 (394)
                      |++++++|+|||..+++.|+..+++.++|++++++++.+...+...++...++.++|+|||++|+|||||+.+.++++++
T Consensus       106 la~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~  185 (515)
T 2d4e_A          106 LAVMECLDAGQVLRIVRAQVARAAENFAFYAEYAEHAMEDRTFPVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRIAP  185 (515)
T ss_dssp             HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHTTGGGTTCEEECCBTTTEEEEEEEEECCCEEEECCSSSHHHHHHHHHHH
T ss_pred             HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecCCceEEECCCCchhhhhhhhhhH
Confidence            99999999999999999999999999999999988877765443234556688999999999999999999999999999


Q ss_pred             Hh-----------------------------------------------------------------hHHHHHh----hh
Q psy3652         194 AL-----------------------------------------------------------------VGVAVQS----RF  204 (394)
Q Consensus       194 aL-----------------------------------------------------------------~g~~i~~----~~  204 (394)
                      ||                                                                 +|+.|++    ++
T Consensus       186 ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~I~~~aa~~l  265 (515)
T 2d4e_A          186 ALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAADHL  265 (515)
T ss_dssp             HHHTTCCEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGGGT
T ss_pred             HHHcCCeeeecCCCCcHHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHhhcC
Confidence            99                                                                 7777765    56


Q ss_pred             hhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc-----------------------------
Q psy3652         205 GKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK-----------------------------  255 (394)
Q Consensus       205 ~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~-----------------------------  255 (394)
                      ||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++                             
T Consensus       266 ~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~g  345 (515)
T 2d4e_A          266 KRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLDPETEVG  345 (515)
T ss_dssp             CEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTCSBC
T ss_pred             CceEecCCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhHHHHHHHHHHHHHhhcccCCcccccCccC
Confidence            899999999999999999999999999999999999999999999999998                             


Q ss_pred             -----------------------------cCCC---------CCceecCeEEEcCCCCCcccccccccceEEEEeeCCHH
Q psy3652         256 -----------------------------KIDR---------PGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLD  297 (394)
Q Consensus       256 -----------------------------~~~~---------~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~  297 (394)
                                                   ....         .|+|++|||+.+ +++|++++||+||||++|++|+|+|
T Consensus       346 pli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~~~g~~~~PTvl~~-~~~~~i~~eEiFGPVl~v~~~~~~d  424 (515)
T 2d4e_A          346 PLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIPFKDEE  424 (515)
T ss_dssp             CCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCBCTTSCBCTTTTCBCCEEEEC-CTTSHHHHSCCCSSEEEEEEESSHH
T ss_pred             CCcCHHHHHHHHHHHHHHHHCCCEEEeCCccccccccccccCCCceeCCEEEeC-CCCChhhhccccCCceEEEeeCCHH
Confidence                                         0011         489999999999 9999999999999999999999999


Q ss_pred             HHHHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEE
Q psy3652         298 EAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTV  377 (394)
Q Consensus       298 eAi~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v  377 (394)
                      |||+++|+++|||++||||+|.+++++++  .++++|+|+||+++. ..+.+||||+|.||+|+++|.+++++|++.|+|
T Consensus       425 eAi~~aN~~~~gL~a~v~t~d~~~a~~~~--~~l~aG~V~vN~~~~-~~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~K~v  501 (515)
T 2d4e_A          425 EALRKANDTKYGLAAYVFTRDLERAHRLA--LELEAGMVYLNSHNV-RHLPTPFGGVKGSGDRREGGTYALDFYTDLKTI  501 (515)
T ss_dssp             HHHHHHHCSSCCSEEEEECSBHHHHHHHH--HHSCSSEEEESSSCC-CCTTSCBCCSGGGBCSCBSHHHHHHHHEEEEEE
T ss_pred             HHHHHHhcCCCCceEEEECCCHHHHHHHH--HhCCeeEEEECCCCC-CCCCCCCCCcCCCCCCccchHHHHHHhCceeEE
Confidence            99999999999999999999999999999  889999999998643 557899999999999999999999999999999


Q ss_pred             EEecCCccc
Q psy3652         378 TINHGKEIT  386 (394)
Q Consensus       378 ~~~~~~~~~  386 (394)
                      +++++...|
T Consensus       502 ~~~~~~~~~  510 (515)
T 2d4e_A          502 ALPLRPPHV  510 (515)
T ss_dssp             EEESSCCCC
T ss_pred             EEcCCCCCC
Confidence            998755444

>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A

Probab=100.00  E-value=4.5e-77  Score=612.04  Aligned_cols=346  Identities=24%  Similarity=0.394  Sum_probs=319.3

Q ss_pred             CCCCceeCCeeccCCCeeeeecCCC-CCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHH
Q psy3652          35 VNPGVYDGTSWKANGEIIPSINPST-GETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVP  113 (394)
Q Consensus        35 ~~~~~~i~G~~~~~~~~~~v~nP~t-g~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~  113 (394)
                      ...++||||+|+.++.+++++||+| |+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|++++++|++++++
T Consensus        36 ~~~~~~I~G~~~~~~~~~~~~nP~t~~~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e  115 (538)
T 3qan_A           36 KEYPLIINGERVTTEDKIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAFQTWRNVNPEERANILVKAAAIIRRRKHE  115 (538)
T ss_dssp             EEECEEETTEEECCSSEEEEECSSSTTCEEEEEECBCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred             cccceeECCEEecCCCeEEEECCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence            3567899999988888999999999 999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHcCCChHHhHHHHHHHHHHHHHHHHh-hhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHH
Q psy3652         114 LGQLVSLEMGKILAEGIGEVQEFIDICDYAVGL-SRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAA  192 (394)
Q Consensus       114 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~-~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~  192 (394)
                      |++++++|+|||..+++.|+..+++.++|+++. .+.+.+...+.. .+...++.++|+|||++|+|||||+.+.+++++
T Consensus       116 la~~~~~e~Gk~~~ea~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a  194 (538)
T 3qan_A          116 FSAWLVHEAGKPWKEADADTAEAIDFLEYYARQMIELNRGKEILSR-PGEQNRYFYTPMGVTVTISPWNFALAIMVGTAV  194 (538)
T ss_dssp             HHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCBCCCCC-TTEEEEEEEEECCEEEEECCSTTTTHHHHHHHH
T ss_pred             HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccc-CCcceeeecCCCcEEEEECCCchHHHHHHHHHH
Confidence            999999999999999999999999999999998 566666655432 356678899999999999999999999999999


Q ss_pred             HHh-----------------------------------------------------------------hHHHHHh----h
Q psy3652         193 IAL-----------------------------------------------------------------VGVAVQS----R  203 (394)
Q Consensus       193 ~aL-----------------------------------------------------------------~g~~i~~----~  203 (394)
                      +||                                                                 +|+.|++    +
T Consensus       195 ~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~  274 (538)
T 3qan_A          195 APIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERAAVV  274 (538)
T ss_dssp             HHHHTTCEEEEECCTTSHHHHHHHHHHHHHTTCCTTSEEECCBCTTTTHHHHHHCTTEEEEEEESCHHHHHHHHHHHTSC
T ss_pred             HHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCCCeEEEEecCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhhc
Confidence            999                                                                 7787765    3


Q ss_pred             ------hhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc--------------------c-
Q psy3652         204 ------FGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK--------------------K-  256 (394)
Q Consensus       204 ------~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~--------------------~-  256 (394)
                            +||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++                    . 
T Consensus       275 ~~~~~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~  354 (538)
T 3qan_A          275 RPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLTVGDPT  354 (538)
T ss_dssp             CTTCCSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHTTCCBSCTT
T ss_pred             cccccccccEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCccCceeEEehHHHHHHHHHHHHHHHhccCCCCC
Confidence                  7899999999999999999999999999999999999999999999999999                    0 


Q ss_pred             -------------------------------------CCCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHH
Q psy3652         257 -------------------------------------IDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEA  299 (394)
Q Consensus       257 -------------------------------------~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eA  299 (394)
                                                           .+..|+|++|||+.+++++|++++||+||||++|++|+|+|||
T Consensus       355 ~~~~~~Gpli~~~~~~rv~~~i~~a~~~G~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~deA  434 (538)
T 3qan_A          355 NRDNYMGPVIDEKAFEKIMSYIEIGKKEGRLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKANDFDHA  434 (538)
T ss_dssp             STTCSBCCCSCHHHHHHHHHHHHHHHHHSEEEECCCEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHH
T ss_pred             CCCCCCcCccCHHHHHHHHHHHHHHHHCCeEEeCCCcCCCCCceeCCeeeecCCCCChhhCCCcCCcEEEEEEeCCHHHH
Confidence                                                 0015899999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEc-CCCCCCCCCCCccCCCCCCCC-CCchHHHHHhhhheeEE
Q psy3652         300 ITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVN-IPTNGAEIGGAFGGEKYTGGG-RESGSDSWKQYCRRSTV  377 (394)
Q Consensus       300 i~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN-~~~~~~~~~~pfGG~~~SG~G-~~~g~~~l~~f~~~k~v  377 (394)
                      |+++|+++|||++||||+|.+++++++  .++++|+|+|| .++....+.+||||+|.||+| +++|.+++++|++.|+|
T Consensus       435 i~~aN~~~~gLaa~v~t~d~~~a~~~~--~~l~aG~V~iN~~~~~~~~~~~PfGG~k~SG~G~~~~G~~gl~~ft~~k~v  512 (538)
T 3qan_A          435 LEIANNTEYGLTGAVITRNRAHIEQAK--REFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAGGPDYLALHMQAKTV  512 (538)
T ss_dssp             HHHHHCSSEESEEEEECSCHHHHHHHH--HHCCCSEEEESSCSCCCCTTTSCBCCEETTBSCCCBTSTTTGGGGEEEEEE
T ss_pred             HHHHhcCCCCcEEEEECCCHHHHHHHH--HhCCeeEEEEeCCCCCCCCCCCCcCCcCcCCCCcccccHHHHHHhhCeEEE
Confidence            999999999999999999999999999  88999999999 554444778999999999999 99999999999999999


Q ss_pred             EEecCC
Q psy3652         378 TINHGK  383 (394)
Q Consensus       378 ~~~~~~  383 (394)
                      +++...
T Consensus       513 ~~~~~~  518 (538)
T 3qan_A          513 SEMYAE  518 (538)
T ss_dssp             EEEC--
T ss_pred             EEecCC
Confidence            998754

>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*

Probab=100.00  E-value=1.3e-76  Score=602.50  Aligned_cols=344  Identities=30%  Similarity=0.498  Sum_probs=317.4

Q ss_pred             CCCCCceeCCeecc--CCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCH
Q psy3652          34 SVNPGVYDGTSWKA--NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKL  111 (394)
Q Consensus        34 ~~~~~~~i~G~~~~--~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~  111 (394)
                      +...++||||+|+.  ++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|+++++.|++++
T Consensus         4 ~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~   83 (479)
T 2imp_A            4 PVQHPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPEWEALPAIERASWLRKISAGIRERA   83 (479)
T ss_dssp             CEECCEEETTEEECCCCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred             CcccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHH
Confidence            44567899999983  5678999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHH
Q psy3652         112 VPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNA  191 (394)
Q Consensus       112 ~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~  191 (394)
                      ++|++++++|+|||..+++.|+..+++.++|+++.++++.+...+...++...++.++|+|||++|+|||||+.+.++++
T Consensus        84 ~ela~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~  163 (479)
T 2imp_A           84 SEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKM  163 (479)
T ss_dssp             HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHTTTTTCCCEEECCSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccCCCCceeEEEEeccceEEEECCCchHHHHHHHHH
Confidence            99999999999999999999999999999999999888776654433345566889999999999999999999999999


Q ss_pred             HHHh-----------------------------------------------------------------hHHHHHh----
Q psy3652         192 AIAL-----------------------------------------------------------------VGVAVQS----  202 (394)
Q Consensus       192 ~~aL-----------------------------------------------------------------~g~~i~~----  202 (394)
                      ++||                                                                 +|+.|++    
T Consensus       164 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~  243 (479)
T 2imp_A          164 APALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAK  243 (479)
T ss_dssp             HHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTEEEEEEESCHHHHHHHHHHHHT
T ss_pred             HHHHHcCCEEEEECCccchHHHHHHHHHHHHhCCCcCeEEEEECCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHhc
Confidence            9999                                                                 7777764    


Q ss_pred             hhhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc----------------------c----
Q psy3652         203 RFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK----------------------K----  256 (394)
Q Consensus       203 ~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~----------------------~----  256 (394)
                      ++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++                      .    
T Consensus       244 ~~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~  323 (479)
T 2imp_A          244 NITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERNDI  323 (479)
T ss_dssp             TTCEEEEECCCCCEEEECTTSCHHHHHHHHHTTSSTTTTCCSSSCSEEEEEGGGHHHHHHHHHHHHHTCCBSCTTTCSSC
T ss_pred             cCCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCcCCcEEEEehhhHHHHHHHHHHHHHhcccCCccccCCC
Confidence            56899999999999999999999999999999999999999999999999998                      0    


Q ss_pred             -----------------------------C-----CCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHH
Q psy3652         257 -----------------------------I-----DRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITW  302 (394)
Q Consensus       257 -----------------------------~-----~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~  302 (394)
                                                   .     +..|+|++|||+.+++++|++++||+||||++|++|+|+||||++
T Consensus       324 ~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPVl~v~~~~~~~eAi~~  403 (479)
T 2imp_A          324 AMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISM  403 (479)
T ss_dssp             SBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCCCSSSCCCCCEEEESCCTTSGGGGSCCCSSEEEEEEESSHHHHHHH
T ss_pred             ccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCceECCEEEeCCCCCCHHHhCccCCceEEEEeeCCHHHHHHH
Confidence                                         0     013889999999999999999999999999999999999999999


Q ss_pred             HhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEEe
Q psy3652         303 NNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTIN  380 (394)
Q Consensus       303 ~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~~  380 (394)
                      +|+++|||++||||+|.+++++++  .++++|+|+||++... .+.+||||+|.||+|+++|.+++++|++.|+|+++
T Consensus       404 aN~~~~gL~a~v~t~d~~~~~~~~--~~l~~G~v~iN~~~~~-~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~v~~~  478 (479)
T 2imp_A          404 ANDSDYGLTSSIYTQNLNVAMKAI--KGLKFGETYINRENFE-AMQGFHAGWRKSGIGGADGKHGLHEYLQTQVVYLQ  478 (479)
T ss_dssp             HHCSSEESEEEEECCCHHHHHHHH--HHCCSSEEEESSCCCC-CTTSCBCCEETTEESCBSHHHHHHTTEEEEEEEEE
T ss_pred             HhcCCCCeeEEEECCCHHHHHHHH--HhCCEeEEEECCCCCC-CCCCCCCCCCCCCCCCCchHHHHHHhcCeeEEEec
Confidence            999999999999999999999999  8899999999986544 57899999999999999999999999999999875

>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}

Probab=100.00  E-value=3e-77  Score=610.63  Aligned_cols=343  Identities=28%  Similarity=0.461  Sum_probs=318.6

Q ss_pred             CCCCCCceeCCeec--cCCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhC
Q psy3652          33 GSVNPGVYDGTSWK--ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHK  110 (394)
Q Consensus        33 ~~~~~~~~i~G~~~--~~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~  110 (394)
                      |....++||||+|+  .++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|++++++|+++
T Consensus        11 ~~~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~   90 (517)
T 3r31_A           11 AQPKASHFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQKEWAAMSPMARGRILKRAADIMRER   90 (517)
T ss_dssp             TCCSSSEEETTEEECCTTSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred             cccccCeeECCEEecCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHH
Confidence            45567899999997  4678999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhh----ccCcccCCCCCCceeEeeeccceeEEEEccCCchhHh
Q psy3652         111 LVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRT----YSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAV  186 (394)
Q Consensus       111 ~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~----~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~  186 (394)
                      +++|++++++|+|||..++  |+..+++.++|+++++++    +.++..+. .++. .++.++|+|||++|+|||||+.+
T Consensus        91 ~~ela~~~~~e~Gk~~~ea--ev~~~~~~~~~~a~~~~~~~~~~~g~~~~~-~~~~-~~~~~~P~GVV~~I~PwN~P~~~  166 (517)
T 3r31_A           91 NDALSTLETLDTGKPIQET--IVADPTSGADAFEFFGGIAPSALNGDYIPL-GGDF-AYTKRVPLGVCVGIGAWNYPQQI  166 (517)
T ss_dssp             HHHHHHHHHHHHCCCHHHH--HHHSHHHHHHHHHHHHHHHHHHTCCCEEEC-SSSE-EEEEEEECSEEEEECCSSSHHHH
T ss_pred             HHHHHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHhhhccccccCccccc-CCCc-ceEEEcCccEEEEECCCcchHHH
Confidence            9999999999999999998  999999999999999887    66665543 2345 78899999999999999999999


Q ss_pred             HHHHHHHHh----------------------------------------------------------------hHHHHHh
Q psy3652         187 YGWNAAIAL----------------------------------------------------------------VGVAVQS  202 (394)
Q Consensus       187 ~~~~~~~aL----------------------------------------------------------------~g~~i~~  202 (394)
                      .++++++||                                                                +|+.|++
T Consensus       167 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~ll~eaGlP~gvv~vv~g~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~  246 (517)
T 3r31_A          167 ACWKAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQGDRDTGPLLVNHPDVAKVSLTGSVPTGRKVAA  246 (517)
T ss_dssp             HHHHHHHHHHTTCEEEEECCTTSCSHHHHHHHHHHHTTCCTTSEEECCCCTTHHHHHHTCTTEEEEEEESCHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCEEEEEcCcccHHHHHHHHHHHHHhCcCcccEEEEECCHHHHHHHHhCCCcCEEeccCCHHHHHHHHH
Confidence            999999999                                                                6777765


Q ss_pred             ----hhhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc-----------------------
Q psy3652         203 ----RFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK-----------------------  255 (394)
Q Consensus       203 ----~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~-----------------------  255 (394)
                          ++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++                       
T Consensus       247 ~aa~~lk~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~  326 (517)
T 3r31_A          247 AAAGHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILGDPLD  326 (517)
T ss_dssp             HHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHTSCCHHHHTTCEEEEEEGGGHHHHHHHHHHHHHHCCBCCTTS
T ss_pred             HhhcCCCcEEEEcCCcCeEEEecCCCHHHHHHHHHHHHhcCCCceeccCceEEEeHHHHHHHHHHHHHHHHhccCCCCCC
Confidence                56899999999999999999999999999999999999999999999999999                       


Q ss_pred             ----------------------------------c--CC---CCCceecCeEEEcCCCCCcccccccccceEEEEeeCCH
Q psy3652         256 ----------------------------------K--ID---RPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSL  296 (394)
Q Consensus       256 ----------------------------------~--~~---~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~  296 (394)
                                                        .  .+   ..|+|+.|||+.+++++|++++||+||||++|++|+|+
T Consensus       327 ~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~  406 (517)
T 3r31_A          327 YATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDE  406 (517)
T ss_dssp             TTCSBCCBSCHHHHHHHHHHHHHHHHHTCEEEECCSCCSSCCSSSBCCCCEEEEEECTTSHHHHSCCSSSEEEEEEECCH
T ss_pred             cCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEECCccCcccCCCCceECCEEEecCCCCCccccceeeccEEEEEEeCCH
Confidence                                              0  00   25899999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeE
Q psy3652         297 DEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRST  376 (394)
Q Consensus       297 ~eAi~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~  376 (394)
                      ||||+++|+++|||++||||+|.+++++++  .++++|+|+||+.+ ...+.+||||+|.||+|+++|++++++|++.|+
T Consensus       407 deAi~~aN~~~~gLaa~v~t~d~~~a~~~~--~~l~aG~V~iN~~~-~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~  483 (517)
T 3r31_A          407 DEVLARANATEFGLAGGVFTADLARAHRVV--DGLEAGTLWINTYN-LCPVEIPFGGSKQSGFGRENSAAALEHYSELKT  483 (517)
T ss_dssp             HHHHHHHHCSSEESEEEEECSCHHHHHHHH--HHSCCSEEEESSCC-CCCTTSCBCCEETTEECCBSTGGGGGGSEEEEE
T ss_pred             HHHHHHHhCCCCCeeEEEEeCCHHHHHHHH--HHCCcceEEECCCC-CCCCCCCcCCcCcCCCCcCchHHHHHHhhceEE
Confidence            999999999999999999999999999999  88999999999864 456789999999999999999999999999999


Q ss_pred             EEEecC
Q psy3652         377 VTINHG  382 (394)
Q Consensus       377 v~~~~~  382 (394)
                      |+++..
T Consensus       484 v~~~~~  489 (517)
T 3r31_A          484 VYVSTG  489 (517)
T ss_dssp             EEECCC
T ss_pred             EEEcCC
Confidence            999864

>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*

Probab=100.00  E-value=6.4e-77  Score=608.20  Aligned_cols=343  Identities=26%  Similarity=0.516  Sum_probs=315.3

Q ss_pred             CCCceeCCeecc--CCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHH--HhhcCChhhHHHHHHHHHHHHhhCH
Q psy3652          36 NPGVYDGTSWKA--NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYA--AWAALPAPRRGEIVRQIGDALRHKL  111 (394)
Q Consensus        36 ~~~~~i~G~~~~--~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~  111 (394)
                      +.++||||+|+.  ++.+++++||+||+++++++.++.+|+++|+++|++||+  .|+.+|.++|.++|++++++|++++
T Consensus        36 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~av~aA~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~  115 (517)
T 2o2p_A           36 PYQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQ  115 (517)
T ss_dssp             CCSEEETTEEECCGGGCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHTSGGGTSCHHHHHHHHHHHHHHHHHTH
T ss_pred             CCCeEECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhH
Confidence            356899999983  467899999999999999999999999999999999999  9999999999999999999999999


Q ss_pred             HHHHHHHHHHcCCChHHhH-HHHHHHHHHHHHHHHhhhhccCcccCCC---CCCceeEeeeccceeEEEEccCCchhHhH
Q psy3652         112 VPLGQLVSLEMGKILAEGI-GEVQEFIDICDYAVGLSRTYSGSILPSE---RPGHVLLENWNPLGVVGIISAFNFPVAVY  187 (394)
Q Consensus       112 ~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVV~~I~p~N~P~~~~  187 (394)
                      ++|++++++|+|||+.+++ .|+..+++.++|++++++++.+...+..   .++...++.++|+|||++|+|||||+.+.
T Consensus       116 ~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~  195 (517)
T 2o2p_A          116 EELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMML  195 (517)
T ss_dssp             HHHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHHHGGGCCEEEECCCCCTTSCEEEEEEEEECCEEEEECCSSSHHHHH
T ss_pred             HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEecCCccEEEECCCcchHHHH
Confidence            9999999999999999997 8999999999999999988776554432   22335678999999999999999999999


Q ss_pred             HHHHHHHh-----------------------------------------------------------------hHHHHHh
Q psy3652         188 GWNAAIAL-----------------------------------------------------------------VGVAVQS  202 (394)
Q Consensus       188 ~~~~~~aL-----------------------------------------------------------------~g~~i~~  202 (394)
                      ++++++||                                                                 +|+.|++
T Consensus       196 ~~~~a~ALaaGNtVVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~FTGS~~~G~~I~~  275 (517)
T 2o2p_A          196 SWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMK  275 (517)
T ss_dssp             HHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHH
T ss_pred             HHHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECCHHHHHHHHH
Confidence            99999999                                                                 6777754


Q ss_pred             -----hhhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc----------------------
Q psy3652         203 -----RFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK----------------------  255 (394)
Q Consensus       203 -----~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~----------------------  255 (394)
                           ++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++                      
T Consensus       276 ~aa~~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vGdp~  355 (517)
T 2o2p_A          276 SCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPL  355 (517)
T ss_dssp             HHHHHTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCTT
T ss_pred             HhHHhcCCeEEEECCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhcCCCCCC
Confidence                 46899999999999999999999999999999999999999999999999999                      


Q ss_pred             -------------------------------------cCCCCCceecCeEEEcCCCCCcccccccccceEEEEeeCC--H
Q psy3652         256 -------------------------------------KIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDS--L  296 (394)
Q Consensus       256 -------------------------------------~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~--~  296 (394)
                                                           ..+..|+|++|||+.+++++|++++||+||||++|++|+|  +
T Consensus       356 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~~  435 (517)
T 2o2p_A          356 ERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDV  435 (517)
T ss_dssp             STTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECTTCS
T ss_pred             CCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeccccCCCCCCeECCEEEeCCCCCChhhhccccccEEEEEEcCCCCH
Confidence                                                 0012489999999999999999999999999999999999  9


Q ss_pred             HHHHHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeE
Q psy3652         297 DEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRST  376 (394)
Q Consensus       297 ~eAi~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~  376 (394)
                      ||||+++|+++|||+++|||+|.+++++++  .++++|+|+||+++ ...+.+||||+|.||+|+++|.+++++|++.|+
T Consensus       436 deAi~~aN~~~~GL~a~v~t~d~~~a~~~~--~~l~aG~V~iN~~~-~~~~~~PfGG~k~SG~Gr~~G~~~l~~~~~~k~  512 (517)
T 2o2p_A          436 DAVLSRANATEFGLASGVFTRDINKALYVS--DKLQAGTVFINTYN-KTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKT  512 (517)
T ss_dssp             HHHHHHHTCSSCCSCCEEECSBHHHHHHHH--HHCCSSEEEESCSS-CCCTTSCBCCCGGGEECCBSHHHHHHTTEEEEE
T ss_pred             HHHHHHHhcCCCCceEEEeCCCHHHHHHHH--HhcCEeEEEECCCC-CCCCCCCcCCcCcCCcCccChHHHHHHhCCceE
Confidence            999999999999999999999999999999  88999999999864 345689999999999999999999999999999


Q ss_pred             EEEec
Q psy3652         377 VTINH  381 (394)
Q Consensus       377 v~~~~  381 (394)
                      |++++
T Consensus       513 v~~~~  517 (517)
T 2o2p_A          513 VTFEY  517 (517)
T ss_dssp             EEEEC
T ss_pred             EEeeC
Confidence            98763

>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A

Probab=100.00  E-value=1.2e-76  Score=603.72  Aligned_cols=341  Identities=27%  Similarity=0.468  Sum_probs=314.3

Q ss_pred             CCceeCCeecc-CCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHH
Q psy3652          37 PGVYDGTSWKA-NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLG  115 (394)
Q Consensus        37 ~~~~i~G~~~~-~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~  115 (394)
                      .++||||+|+. ++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|+++++.|++++++|+
T Consensus        24 ~~~~i~G~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela  103 (495)
T 1wnd_A           24 HKLLINGELVSGEGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVRAECLLKLADVIEENGQVFA  103 (495)
T ss_dssp             CCEEETTEEECCCSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHH
T ss_pred             cCeEECCEEecCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            46899999983 33789999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHcCCChHHhHH-HHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHH
Q psy3652         116 QLVSLEMGKILAEGIG-EVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIA  194 (394)
Q Consensus       116 ~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~a  194 (394)
                      +++++|+|||..+++. |+..+++.++|+++.++++.++..+...++...++.++|+|||++|+|||||+.+.++++++|
T Consensus       104 ~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~A  183 (495)
T 1wnd_A          104 ELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPA  183 (495)
T ss_dssp             HHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHH
T ss_pred             HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEeeecCCeEEEECCCcchHHHHHHHHHHH
Confidence            9999999999999987 999999999999999888766544432234456788999999999999999999999999999


Q ss_pred             h----------------------------------------------------------------hHHHHHh----hhhh
Q psy3652         195 L----------------------------------------------------------------VGVAVQS----RFGK  206 (394)
Q Consensus       195 L----------------------------------------------------------------~g~~i~~----~~~~  206 (394)
                      |                                                                +|+.|++    ++||
T Consensus       184 LaaGN~VVlKps~~tp~t~~~l~~l~~ealP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa~~l~~  263 (495)
T 1wnd_A          184 LAAGNCVVLKPSEITPLTALKLAELAKDIFPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASSIKR  263 (495)
T ss_dssp             HHTTCEEEEECCTTCCHHHHHHHHHHTTTSCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHHHHHGGGTCE
T ss_pred             HHcCCeeEeeCCCCChHHHHHHHHHHHHhCCcCeEEEEeCCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHHhcCCc
Confidence            9                                                                7777765    4689


Q ss_pred             hccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc-------------------------------
Q psy3652         207 LLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK-------------------------------  255 (394)
Q Consensus       207 ~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~-------------------------------  255 (394)
                      +++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++                               
T Consensus       264 v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpl  343 (495)
T 1wnd_A          264 THMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPL  343 (495)
T ss_dssp             EEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTTSTTCCBCCC
T ss_pred             cccccCCCCeEEECCcCCHHHHHHHHHHHHHhcCCCCCCCCcEEEecchhHHHHHHHHHHHHHhccCCCCccCCCCccCC
Confidence            9999999999999999999999999999999999999999999999999                               


Q ss_pred             -------------------c-C----C-C----CCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcC
Q psy3652         256 -------------------K-I----D-R----PGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEV  306 (394)
Q Consensus       256 -------------------~-~----~-~----~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~  306 (394)
                                         . .    . .    .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|++
T Consensus       344 i~~~~~~rv~~~i~~a~~~G~a~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~  423 (495)
T 1wnd_A          344 SSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDS  423 (495)
T ss_dssp             SCHHHHHHHHHHHHHHHHTSSCEEEECCSBCSSSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHSS
T ss_pred             CCHHHHHHHHHHHHHHHhCCCeEEEECCcccCCCCCeeCCEEEeCCCCCChhhhccccCceEEEEEeCCHHHHHHHHhcC
Confidence                               0 0    0 1    37899999999999999999999999999999999999999999999


Q ss_pred             CCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEEe
Q psy3652         307 KQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTIN  380 (394)
Q Consensus       307 ~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~~  380 (394)
                      +|||+++|||+|.+++++++  .++++|+|+||+... ..+.+||||+|.||+|+++|.+++++|++.|+|+++
T Consensus       424 ~~gL~a~v~t~d~~~a~~~~--~~l~aG~V~iN~~~~-~~~~~PfGG~k~SG~Gr~~G~~gl~~f~~~k~v~~~  494 (495)
T 1wnd_A          424 QYGLASSVWTKDVGRAHRVS--ARLQYGCTWVNTHFM-LVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVMVK  494 (495)
T ss_dssp             SCCSEEEEECSBHHHHHHHH--HHCCSSEEEESCCCC-CCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEEE
T ss_pred             CCCeeEEEECCCHHHHHHHH--HhCCcceEEECCCCC-CCCCCCCCCCCcCcCCccchHHHHHHhhCeEEEEec
Confidence            99999999999999999999  889999999998643 457899999999999999999999999999999875

>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}

Probab=100.00  E-value=1.7e-76  Score=605.11  Aligned_cols=351  Identities=26%  Similarity=0.382  Sum_probs=306.4

Q ss_pred             CCCceeCCeec--cCCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHH
Q psy3652          36 NPGVYDGTSWK--ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVP  113 (394)
Q Consensus        36 ~~~~~i~G~~~--~~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~  113 (394)
                      ..++||||+|+  .++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|++++++|++++++
T Consensus        12 ~~~~~I~G~~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e   91 (508)
T 3r64_A           12 ATKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQAEWAATPAAERSAIIYRAAELLEEHREE   91 (508)
T ss_dssp             TTSEEETTEEECCCSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred             ccceeECCEEecCCCCCEEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhHHH
Confidence            56799999998  4678999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCcccCCC-CCCceeEeeeccceeEEEEccCCchhHhHHHHHH
Q psy3652         114 LGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSE-RPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAA  192 (394)
Q Consensus       114 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~  192 (394)
                      |++++++|+|||..+++.|+..+++.++|+++..+++.+ ..+.. .++...++.++|+|||++|+|||||+.+.+++++
T Consensus        92 la~~~~~e~Gk~~~~a~~Ev~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~  170 (508)
T 3r64_A           92 IVEWLIKESGSTRSKANLEITLAGNITKESASFPGRVHG-RISPSNTPGKENRVYRVAKGVVGVISPWNFPLNLSIRSVA  170 (508)
T ss_dssp             HHHHHHHTSCCCHHHHHHHHHHHHHHHHHHTTSTTTCCE-EEECCSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHH
T ss_pred             HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcC-cccccCCCCceeEEEEecceEEEEECCCcchHHHHHHHHH
Confidence            999999999999999999999999999999998887666 43322 3456678899999999999999999999999999


Q ss_pred             HHh------------------------------------------------------------------hHHHHHh----
Q psy3652         193 IAL------------------------------------------------------------------VGVAVQS----  202 (394)
Q Consensus       193 ~aL------------------------------------------------------------------~g~~i~~----  202 (394)
                      +||                                                                  +|+.|++    
T Consensus       171 ~ALaaGN~VVlKps~~tp~t~~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~aa~  250 (508)
T 3r64_A          171 PALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVGELAIN  250 (508)
T ss_dssp             HHHHTTCEEEEECCTTCHHHHTHHHHHHHHTTTCCTTTEEECCCCTTTTHHHHHHCSSCSEEEEESCHHHHHHHHHHHHS
T ss_pred             HHHhcCCEEEEECCCCChHHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHhhCCCccEEEEECCHHHHHHHHHHhhc
Confidence            999                                                                  7777765    


Q ss_pred             --hhhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc-------------------------
Q psy3652         203 --RFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK-------------------------  255 (394)
Q Consensus       203 --~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~-------------------------  255 (394)
                        ++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++                         
T Consensus       251 ~~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~  330 (508)
T 3r64_A          251 GGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPTGDPSAEG  330 (508)
T ss_dssp             SSSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTSTTCTTTCCSEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSSS
T ss_pred             ccCCCceEeecCCcCceEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEehhHHHHHHHHHHHHHHhccCCCCccCC
Confidence              56899999999999999999999999999999999999999999999999998                         


Q ss_pred             -----------------------------cC--CCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHh
Q psy3652         256 -----------------------------KI--DRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNN  304 (394)
Q Consensus       256 -----------------------------~~--~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n  304 (394)
                                                   ..  ...|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|
T Consensus       331 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN  410 (508)
T 3r64_A          331 TLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPIEGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAELAN  410 (508)
T ss_dssp             CCBCCCSCHHHHHHHHHHHHHHHTTTCEEEECCCEETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEESSHHHHHHHHT
T ss_pred             CcccCCCCHHHHHHHHHHHHHHHHcCCEEEecCCCCCcEEecEEEecCCCCChhhcccccCceEEEEEeCCHHHHHHHHh
Confidence                                         00  11488999999999999999999999999999999999999999999


Q ss_pred             cCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEEecCCc
Q psy3652         305 EVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTINHGKE  384 (394)
Q Consensus       305 ~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~~~~~~  384 (394)
                      +++|||++||||+|.+++++++  .++++|+|+||+++....+.+||||+|.||+|+++|.+++++|++.|+|++++...
T Consensus       411 ~~~~gL~a~v~t~d~~~a~~~~--~~l~aG~V~vN~~~~~~~~~~PfGG~~~SG~Gr~~G~~~l~~ft~~k~v~~~~~~~  488 (508)
T 3r64_A          411 ASDFGLSAAVWSKDIDRAAQFA--LQIDSGMVHINDLTVNDEPHVMFGGSKNSGLGRFNGDWAIEEFTTDRWIGIKRSAE  488 (508)
T ss_dssp             SSSCCSCEEEECSCHHHHHHHH--TTSCSSEEEECC--------------------CCCHHHHHHHTEEEEEEEEECCST
T ss_pred             CCCCCcEEEEEcCCHHHHHHHH--HhCCcceEEEcCCCCCCCCCCCcCCcCCCCCCcCccHHHHHHhhceEEEEEecccc
Confidence            9999999999999999999999  88999999999976445678999999999999999999999999999999998765


Q ss_pred             ccccc
Q psy3652         385 ITLAQ  389 (394)
Q Consensus       385 ~~~~~  389 (394)
                      .+..+
T Consensus       489 ~~~~~  493 (508)
T 3r64_A          489 NLYFQ  493 (508)
T ss_dssp             TCCCC
T ss_pred             hhcch
Confidence            55433

>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*

Probab=100.00  E-value=1.2e-76  Score=605.19  Aligned_cols=342  Identities=26%  Similarity=0.473  Sum_probs=316.2

Q ss_pred             CCCceeCCeecc--CCCe-eeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHH
Q psy3652          36 NPGVYDGTSWKA--NGEI-IPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLV  112 (394)
Q Consensus        36 ~~~~~i~G~~~~--~~~~-~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~  112 (394)
                      ..++||||+|+.  ++.+ ++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|++++++|+++++
T Consensus        19 ~~~~~i~g~~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~   98 (503)
T 1a4s_A           19 DDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIERSRVMLEAARIIRERRD   98 (503)
T ss_dssp             SCCEEETTEEECCCTTCCCEEEECTTTCCEEEEECCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred             ccceeECCEEecCCCCCceEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHH
Confidence            456899999973  4567 9999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHH
Q psy3652         113 PLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAA  192 (394)
Q Consensus       113 ~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~  192 (394)
                      +|++++++|+|||..+++.|+..+++.++|+++.++++.++..+.. ++...++.++|+|||++|+|||||+.+.+++++
T Consensus        99 ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a  177 (503)
T 1a4s_A           99 NIAKLEVINNGKTITEAEYDIDAAWQCIEYYAGLAPTLSGQHIQLP-GGAFAYTRREPLGVCAGILAWNYPFMIAAWKCA  177 (503)
T ss_dssp             HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCEEEEECG-GGCEEEEEEEECSEEEEECCSSSHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCC-CCceeEEEEecCceEEEECCCcchHHHHHHHHH
Confidence            9999999999999999999999999999999999988766544332 334567889999999999999999999999999


Q ss_pred             HHh----------------------------------------------------------------hHHHHHh----hh
Q psy3652         193 IAL----------------------------------------------------------------VGVAVQS----RF  204 (394)
Q Consensus       193 ~aL----------------------------------------------------------------~g~~i~~----~~  204 (394)
                      +||                                                                +|+.|++    ++
T Consensus       178 ~ALaaGN~VVlKps~~tp~ta~~l~~l~~~aGlP~gvv~vv~g~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~~  257 (503)
T 1a4s_A          178 PALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTV  257 (503)
T ss_dssp             HHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCSHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHTTT
T ss_pred             HHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEecCchHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhhhcC
Confidence            999                                                                6777764    47


Q ss_pred             hhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc-----------------------------
Q psy3652         205 GKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK-----------------------------  255 (394)
Q Consensus       205 ~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~-----------------------------  255 (394)
                      ||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++                             
T Consensus       258 ~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~g  337 (503)
T 1a4s_A          258 KHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTETRMG  337 (503)
T ss_dssp             CEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBC
T ss_pred             CceEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEehHHHHHHHHHHHHHHHhcCCCCCcccCCccC
Confidence            899999999999999999999999999999999999999999999999999                             


Q ss_pred             -----------------------------cCC-------CCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHH
Q psy3652         256 -----------------------------KID-------RPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEA  299 (394)
Q Consensus       256 -----------------------------~~~-------~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eA  299 (394)
                                                   ...       ..|+|++|||+.+++++|++++||+||||++|++|+|+|||
T Consensus       338 pli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deA  417 (503)
T 1a4s_A          338 GLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEV  417 (503)
T ss_dssp             CCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHH
T ss_pred             CCcCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccccccCCceeCCEEEecCCCCCHHHhccccCceEEEEecCCHHHH
Confidence                                         001       24899999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEE
Q psy3652         300 ITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTI  379 (394)
Q Consensus       300 i~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~  379 (394)
                      |+++|+++|||+++|||+|.+++++++  .++++|+|+||++.. ..+.+||||+|.||+|+++|.+++++|++.|+|++
T Consensus       418 i~~aN~~~~gL~a~v~t~d~~~a~~~~--~~l~aG~V~vN~~~~-~~~~~PfGG~k~SG~G~~~G~~~l~~f~~~k~v~~  494 (503)
T 1a4s_A          418 LQRANNTTFGLASGVFTRDISRAHRVA--ANLEAGTCYINTYSI-SPVEVPFGGYKMSGFGRENGQATVDYYSQLKTVIV  494 (503)
T ss_dssp             HHHHHCSSCCSEEEEECSBHHHHHHHH--HHSCSSEEEESCCCC-CCTTSCBCCSGGGEECCBSTTGGGGGSEEEEEEEE
T ss_pred             HHHHhcCCCCceEEEECCCHHHHHHHH--HHCceeEEEECCCCC-CCCCCCCCCcCCCCCCccchHHHHHHhcCceEEEE
Confidence            999999999999999999999999999  889999999998654 45679999999999999999999999999999998


Q ss_pred             ec
Q psy3652         380 NH  381 (394)
Q Consensus       380 ~~  381 (394)
                      ++
T Consensus       495 ~~  496 (503)
T 1a4s_A          495 EM  496 (503)
T ss_dssp             CC
T ss_pred             cc
Confidence            75

>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}

Probab=100.00  E-value=2.6e-76  Score=601.45  Aligned_cols=345  Identities=26%  Similarity=0.377  Sum_probs=296.6

Q ss_pred             CCCceeCCeec--cCCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHH
Q psy3652          36 NPGVYDGTSWK--ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVP  113 (394)
Q Consensus        36 ~~~~~i~G~~~--~~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~  113 (394)
                      ..++||||+|+  .++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|+++++.|++++++
T Consensus         6 ~~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e   85 (485)
T 4dng_A            6 LNKSFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQKEWAKSTTEDRKAVLQKARGYLHENRDD   85 (485)
T ss_dssp             CCSEEETTEEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHH
T ss_pred             ccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHH
Confidence            46789999998  4678999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCcccCCC-CCCceeEeeeccceeEEEEccCCchhHhHHHHHH
Q psy3652         114 LGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSE-RPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAA  192 (394)
Q Consensus       114 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~  192 (394)
                      |++++++|+|||..+++.|+..+++.++|+++..+++.+...+.. .++...++.++|+|||++|+|||||+.+.+++++
T Consensus        86 la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~  165 (485)
T 4dng_A           86 IIMMIARETGGTIIKSTIELEQTIAILDEAMTYTGELGGVKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIA  165 (485)
T ss_dssp             HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCSCEECCCCSSTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHH
T ss_pred             HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeeccccCCCCceEEEEEecceEEEEECCCccHHHHHHHHHH
Confidence            999999999999999999999999999999999988777655432 3456678899999999999999999999999999


Q ss_pred             HHh------------------------------------------------------------------hHHHHHh----
Q psy3652         193 IAL------------------------------------------------------------------VGVAVQS----  202 (394)
Q Consensus       193 ~aL------------------------------------------------------------------~g~~i~~----  202 (394)
                      +||                                                                  +|+.|++    
T Consensus       166 ~ALaaGN~VVlKps~~tp~~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fTGS~~~g~~i~~~aa~  245 (485)
T 4dng_A          166 PAIALGNSVVHKPDIQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGEIAGR  245 (485)
T ss_dssp             HHHHTTCEEEEECCGGGHHHHTHHHHHHHHHTTCCTTSEEECCCCHHHHTTHHHHCSSCSEEEEEECHHHHHHHHHHHHH
T ss_pred             HHHHcCCEEEEECCCcChHHHHHHHHHHHHHhCcCCCeEEEEeCCChhHHHHHHhCCCCCEEEEECCcHHHHHHHHHHhh
Confidence            999                                                                  6777765    


Q ss_pred             hhhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc---------------------------
Q psy3652         203 RFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK---------------------------  255 (394)
Q Consensus       203 ~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~---------------------------  255 (394)
                      ++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++                           
T Consensus       246 ~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~  325 (485)
T 4dng_A          246 AFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQTDPKTV  325 (485)
T ss_dssp             HTCEEEEEECCCEEEEECTTSCHHHHHHHHHHHHTTCC----CCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCS
T ss_pred             hccchhhhcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCccccCCEEEEeHHHHHHHHHHHHHHHHhccCCCCCcCCCc
Confidence            56899999999999999999999999999999999999999999999999998                           


Q ss_pred             ---------------------------cC--CCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcC
Q psy3652         256 ---------------------------KI--DRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEV  306 (394)
Q Consensus       256 ---------------------------~~--~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~  306 (394)
                                                 ..  ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|++
T Consensus       326 ~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~an~~  405 (485)
T 4dng_A          326 VGPLINERQIEKALEIIEQAKTDGIELAVEGKRVGNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDT  405 (485)
T ss_dssp             BCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCEETTEECCEEEESCCTTSHHHHCCCCSSEEEEEEESSHHHHHHHHHCS
T ss_pred             cCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCcEECCEEEecCCCCChhhcCccccceEEEEEeCCHHHHHHHHhCC
Confidence                                       00  1147899999999999999999999999999999999999999999999


Q ss_pred             CCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEEecC
Q psy3652         307 KQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTINHG  382 (394)
Q Consensus       307 ~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~~~~  382 (394)
                      +|||+++|||+|.+++++++  .++++|+|+||+++....+.+||||+|.||+|+++|.+++++|++.|+|++++.
T Consensus       406 ~~gL~a~v~t~d~~~a~~~~--~~l~~G~v~vN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~~~~  479 (485)
T 4dng_A          406 EYGLSSAVFTSDLEKGEKFA--LQIDSGMTHVNDQSVNDSPNIAFGGNKASGVGRFGNPWVVEEFTVTKWISIQKQ  479 (485)
T ss_dssp             SCCSEEEEECSCHHHHHHHH--TTSCSSEEEESCC----------------------CHHHHHHHEEEEEEEEEC-
T ss_pred             CCCceEEEECCCHHHHHHHH--HhcCcceEEECCCCCCCCCCCCcCCcCCCCCCccchHHHHHHhhceEEEEEecC
Confidence            99999999999999999999  889999999998764456789999999999999999999999999999999864

>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*

Probab=100.00  E-value=2.3e-76  Score=600.15  Aligned_cols=346  Identities=26%  Similarity=0.418  Sum_probs=316.9

Q ss_pred             CCCCCCceeCCeeccCCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHH
Q psy3652          33 GSVNPGVYDGTSWKANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLV  112 (394)
Q Consensus        33 ~~~~~~~~i~G~~~~~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~  112 (394)
                      |++..++||||+|+.+..+++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|++++++|+++++
T Consensus         1 ~~~~~~~~i~g~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~   80 (475)
T 1euh_A            1 MTKQYKNYVNGEWKLSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADILMRDKE   80 (475)
T ss_dssp             -CCBCCEEETTEEECCSSEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred             CCcccceeECCEEecCCCceEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHH
Confidence            45566799999998433399999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCcccCCCCCC----cee-EeeeccceeEEEEccCCchhHhH
Q psy3652         113 PLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPG----HVL-LENWNPLGVVGIISAFNFPVAVY  187 (394)
Q Consensus       113 ~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~----~~~-~~~~~P~GVV~~I~p~N~P~~~~  187 (394)
                      +|++++++|+|||..+++.|+..+++.++|+++.++++.++..+...++    ... ++.++|+|||++|+|||||+.+.
T Consensus        81 ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~  160 (475)
T 1euh_A           81 KIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLA  160 (475)
T ss_dssp             HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTSTTHHH
T ss_pred             HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCccccceeeEEEEeccceEEEECCCCchHHHH
Confidence            9999999999999999999999999999999999887766543322233    345 78999999999999999999999


Q ss_pred             HHHHHHHh-----------------------------------------------------------------hHHHHHh
Q psy3652         188 GWNAAIAL-----------------------------------------------------------------VGVAVQS  202 (394)
Q Consensus       188 ~~~~~~aL-----------------------------------------------------------------~g~~i~~  202 (394)
                      ++++++||                                                                 +|+.|++
T Consensus       161 ~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~  240 (475)
T 1euh_A          161 GSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGK  240 (475)
T ss_dssp             HHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHH
T ss_pred             HHHHHHHHHcCCEEEEeCCCcChHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHHhCCCcCEEEEECchHHHHHHHH
Confidence            99999999                                                                 7788876


Q ss_pred             h--hhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc-------------------------
Q psy3652         203 R--FGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK-------------------------  255 (394)
Q Consensus       203 ~--~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~-------------------------  255 (394)
                      .  +||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++                         
T Consensus       241 ~aa~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~  320 (475)
T 1euh_A          241 MAGMRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPEDDA  320 (475)
T ss_dssp             HTTTSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBSCGGGTC
T ss_pred             hcCCCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCCCCcEEEEehhHHHHHHHHHHHHHHhccCCCccccC
Confidence            4  6899999999999999999999999999999999999999999999999998                         


Q ss_pred             ----------------------------cCCC--CCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhc
Q psy3652         256 ----------------------------KIDR--PGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNE  305 (394)
Q Consensus       256 ----------------------------~~~~--~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~  305 (394)
                                                  ....  .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+
T Consensus       321 ~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~eai~~an~  400 (475)
T 1euh_A          321 DITPLIDTKSADYVEGLINDANDKGATALTEIKREGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNK  400 (475)
T ss_dssp             SBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCEETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESCHHHHHHHHHH
T ss_pred             ccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCceeCCEEEeCCCCcCHHHcCccccceEEEEecCCHHHHHHHHhC
Confidence                                        0001  3899999999999999999999999999999999999999999999


Q ss_pred             CCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcC-CCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEEec
Q psy3652         306 VKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNI-PTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTINH  381 (394)
Q Consensus       306 ~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~-~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~~~  381 (394)
                      ++|||+++|||+|.+++++++  .++++|.|+||+ ++. ..+.+||||+|.||+|+++|.+++++|++.|+|++++
T Consensus       401 ~~~gL~a~v~t~d~~~~~~~~--~~l~~G~v~vN~~~~~-~~~~~pfGG~k~SG~G~~~g~~~~~~~~~~k~v~~~~  474 (475)
T 1euh_A          401 SEYGLQASIFTNDFPRAFGIA--EQLEVGTVHINNKTQR-GTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVFDI  474 (475)
T ss_dssp             SSEESEEEEECSCHHHHHHHH--HHSCSSEEEESSCCCC-CSTTSCBCCEETTEESCBSHHHHHHHTEEEEEEEEEC
T ss_pred             CCCCeeEEEEeCCHHHHHHHH--HhCCEeeEEECCCCCC-CCCCCCcCCCCCCCcCCCccHHHHHHhCCeeEEEEec
Confidence            999999999999999999999  889999999998 543 3678999999999999999999999999999998763

>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}

Probab=100.00  E-value=3e-76  Score=601.00  Aligned_cols=340  Identities=25%  Similarity=0.411  Sum_probs=309.1

Q ss_pred             CCCCCCCceeCCeecc--CCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhh
Q psy3652          32 SGSVNPGVYDGTSWKA--NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRH  109 (394)
Q Consensus        32 ~~~~~~~~~i~G~~~~--~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~  109 (394)
                      .|....++||||+|+.  ++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|++++++|++
T Consensus        21 ~m~~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~  100 (497)
T 3i44_A           21 SMLNKRKFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQTWKTTSPHERLGFVEKILEIYEK  100 (497)
T ss_dssp             -CEEECCEEETTEEECCSSCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHH
T ss_pred             ccccccCeeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHH
Confidence            3344678999999973  56789999999999999999999999999999999999999999999999999999999999


Q ss_pred             CHHHHHHHHHHHcCCChHHhH-HHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEee-eccceeEEEEccCCchhHhH
Q psy3652         110 KLVPLGQLVSLEMGKILAEGI-GEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLEN-WNPLGVVGIISAFNFPVAVY  187 (394)
Q Consensus       110 ~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~-~~P~GVV~~I~p~N~P~~~~  187 (394)
                      ++++|++++++|+|||..+++ .|+..+++.++++++.+..........  .+...++. ++|+|||++|+|||||+.+.
T Consensus       101 ~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~  178 (497)
T 3i44_A          101 RSSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEALI--EGNEQAILHYDAIGVVGLITPWNWPMNQV  178 (497)
T ss_dssp             THHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEESS--TTCSSCEEEEEECCEEEEECCSSSHHHHH
T ss_pred             HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhccccccccc--CCceeEEEeecCceEEEEECCCcchHHHH
Confidence            999999999999999999998 899999999999998876643322211  13335667 99999999999999999999


Q ss_pred             HHHHHHHh-----------------------------------------------------------------hHHHHHh
Q psy3652         188 GWNAAIAL-----------------------------------------------------------------VGVAVQS  202 (394)
Q Consensus       188 ~~~~~~aL-----------------------------------------------------------------~g~~i~~  202 (394)
                      ++++++||                                                                 +|+.|++
T Consensus       179 ~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I~FTGS~~~G~~i~~  258 (497)
T 3i44_A          179 TLKVIPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDISK  258 (497)
T ss_dssp             HHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHH
T ss_pred             HHHHHHHHHcCCEEEEECCcccHHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEeCcHHHHHHHHH
Confidence            99999999                                                                 6777765


Q ss_pred             ----hhhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc-----------------------
Q psy3652         203 ----RFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK-----------------------  255 (394)
Q Consensus       203 ----~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~-----------------------  255 (394)
                          ++||+++|||||||+||++||| +.|++.+++++|.|+||.|++++|||||++                       
T Consensus       259 ~aa~~~k~v~lElGGk~p~IV~~dAD-~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~  337 (497)
T 3i44_A          259 NASNTLKRVCLELGGKGANIIFADAD-IDALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGPGHQ  337 (497)
T ss_dssp             HHHTTTCEEEEECCCCCEEEECTTSC-TTHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHHCCBCCTTS
T ss_pred             HHhhcCCceeeccCCCCceEECCChh-HHHHHHHHHHHHhcCCCCcccCCEEEEcHHHHHHHHHHHHHHHHhccCCCCCC
Confidence                5689999999999999999999 999999999999999999999999999999                       


Q ss_pred             -------------------------------cCC--------CCCceecCeEEEcCCCCCcccccccccceEEEEeeCCH
Q psy3652         256 -------------------------------KID--------RPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSL  296 (394)
Q Consensus       256 -------------------------------~~~--------~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~  296 (394)
                                                     ...        ..|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus       338 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~  417 (497)
T 3i44_A          338 TGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTE  417 (497)
T ss_dssp             CSSCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSH
T ss_pred             CCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCcCCCCcEECCEEEEeCCCCCHHHcCcccCceEEEEecCCH
Confidence                                           000        15899999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeE
Q psy3652         297 DEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRST  376 (394)
Q Consensus       297 ~eAi~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~  376 (394)
                      ||||+++|+++|||++||||+|.+++++++  .++++|+|+||.  ....+.+||||+|.||+|+++|.+++++|++.|+
T Consensus       418 deAi~~aN~~~~GL~a~v~t~d~~~a~~~a--~~l~aG~V~iN~--~~~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~  493 (497)
T 3i44_A          418 DEAVTLANDTEYGLTNYIQSQDRSKCRRIA--AQVRSGMVEVNG--HELPGGSYFGGVKFSGRAREGGLWGIKEFLDTKA  493 (497)
T ss_dssp             HHHHHHHHCSSCCSEEEEECSCHHHHHHHH--HHSCCSEEEETT--CCCCTTCCBCCSGGGCCCCBSHHHHHHTTEEEEE
T ss_pred             HHHHHHHhCCCCCcEEEEECCCHHHHHHHH--HhCCcCeEEECC--CCCCCCCCcCCcCcCcCCccchHHHHHHhcceeE
Confidence            999999999999999999999999999999  889999999994  3455789999999999999999999999999998


Q ss_pred             EE
Q psy3652         377 VT  378 (394)
Q Consensus       377 v~  378 (394)
                      |+
T Consensus       494 v~  495 (497)
T 3i44_A          494 IS  495 (497)
T ss_dssp             ES
T ss_pred             EE
Confidence            74

>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*

Probab=100.00  E-value=7.3e-76  Score=598.71  Aligned_cols=342  Identities=28%  Similarity=0.535  Sum_probs=315.3

Q ss_pred             CCCceeCCeecc--CCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHH---HhhcCChhhHHHHHHHHHHHHhhC
Q psy3652          36 NPGVYDGTSWKA--NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYA---AWAALPAPRRGEIVRQIGDALRHK  110 (394)
Q Consensus        36 ~~~~~i~G~~~~--~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~---~w~~~~~~~R~~~L~~~a~~l~~~  110 (394)
                      ..++||||+|+.  ++.+++++||+||+++++++.++.+|+++|+++|++||+   .|+.+|.++|.++|++++++|+++
T Consensus        20 ~~~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~   99 (501)
T 1bxs_A           20 YTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERD   99 (501)
T ss_dssp             CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred             ccCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccchhhCCHHHHHHHHHHHHHHHHHH
Confidence            446899999983  467899999999999999999999999999999999999   899999999999999999999999


Q ss_pred             HHHHHHHHHHHcCCChHHhH-HHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHH
Q psy3652         111 LVPLGQLVSLEMGKILAEGI-GEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGW  189 (394)
Q Consensus       111 ~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~  189 (394)
                      +++|++++++|+|||..++. .|+..+++.++|+++.++++.+...+. ..+...++.++|+|||++|+|||||+.+.++
T Consensus       100 ~~ela~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~g~~~~~-~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~  178 (501)
T 1bxs_A          100 RLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPM-DGNFFTYTRSEPVGVCGQIIPWNFPLLMFLW  178 (501)
T ss_dssp             HHHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECC-SSSEEEEEEEEECCEEEEECCSSSHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeeec-cCCcceeEEecCCceEEEECCCcchHHHHHH
Confidence            99999999999999999874 799999999999999998887665443 2345567899999999999999999999999


Q ss_pred             HHHHHh-----------------------------------------------------------------hHHHHHh--
Q psy3652         190 NAAIAL-----------------------------------------------------------------VGVAVQS--  202 (394)
Q Consensus       190 ~~~~aL-----------------------------------------------------------------~g~~i~~--  202 (394)
                      ++++||                                                                 +|+.|++  
T Consensus       179 ~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~a  258 (501)
T 1bxs_A          179 KIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAA  258 (501)
T ss_dssp             HHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHHHHHH
T ss_pred             HHHHHHHcCCeeeccCCCccHHHHHHHHHHHHHhCCCcceEEEEecCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHh
Confidence            999999                                                                 7777764  


Q ss_pred             ---hhhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc------------------------
Q psy3652         203 ---RFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK------------------------  255 (394)
Q Consensus       203 ---~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~------------------------  255 (394)
                         ++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++                        
T Consensus       259 a~~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~  338 (501)
T 1bxs_A          259 GKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTP  338 (501)
T ss_dssp             HHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBSCTTST
T ss_pred             hhccCCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEchhHHHHHHHHHHHHHHhcCCCCCccc
Confidence               46899999999999999999999999999999999999999999999999998                        


Q ss_pred             -----------------------------cC------CCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHH
Q psy3652         256 -----------------------------KI------DRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAI  300 (394)
Q Consensus       256 -----------------------------~~------~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi  300 (394)
                                                   .+      +..|+|+.|||+.+++++|++++||+||||++|++|+|+||||
T Consensus       339 ~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi  418 (501)
T 1bxs_A          339 GVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVI  418 (501)
T ss_dssp             TCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHH
T ss_pred             CCccCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEecCCCCCHHHhcccccceEEEEEeCCHHHHH
Confidence                                         00      1248999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEEe
Q psy3652         301 TWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTIN  380 (394)
Q Consensus       301 ~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~~  380 (394)
                      +++|+++|||++||||+|.+++++++  .++++|+|+||+++. ..+.+||||+|.||+|+++|.+++++|++.|+|+++
T Consensus       419 ~~aN~~~~gL~a~v~t~d~~~a~~~~--~~l~aG~V~iN~~~~-~~~~~pfGG~k~SG~G~~~G~~~l~~f~~~K~v~~~  495 (501)
T 1bxs_A          419 KRANNTFYGLSAGIFTNDIDKAITVS--SALQSGTVWVNCYSV-VSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTIK  495 (501)
T ss_dssp             HHHHCSSCCSEEEEECSBHHHHHHHH--HHSCCSEEEESCCCC-CCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEE
T ss_pred             HHHhcCCCCeeEEEEcCCHHHHHHHH--HhcCeeEEEECCCCC-CCCCCCCCCcCcCCcCccchHHHHHHhhCeeEEEEc
Confidence            99999999999999999999999999  889999999998643 456799999999999999999999999999999987


Q ss_pred             c
Q psy3652         381 H  381 (394)
Q Consensus       381 ~  381 (394)
                      +
T Consensus       496 ~  496 (501)
T 1bxs_A          496 I  496 (501)
T ss_dssp             C
T ss_pred             c
Confidence            5

>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}

Probab=100.00  E-value=1.5e-76  Score=603.39  Aligned_cols=344  Identities=26%  Similarity=0.423  Sum_probs=317.2

Q ss_pred             CCCceeCCeecc--CCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHH--HhhcCChhhHHHHHHHHHHHHhhCH
Q psy3652          36 NPGVYDGTSWKA--NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYA--AWAALPAPRRGEIVRQIGDALRHKL  111 (394)
Q Consensus        36 ~~~~~i~G~~~~--~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~  111 (394)
                      ..++||||+|+.  ++.+++++||+||+++++++.++.+|+++|+++|++||+  .|+.+|.++|.++|++++++|++++
T Consensus         8 ~~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~   87 (495)
T 3b4w_A            8 YDKLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPHERAAVIAAAVKMLAERK   87 (495)
T ss_dssp             CSSEEETTEEECCSSCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHSSTTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred             ccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHHH
Confidence            346899999983  467899999999999999999999999999999999999  8999999999999999999999999


Q ss_pred             HHHHHHHHHHcCCChHHhH-HHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHH
Q psy3652         112 VPLGQLVSLEMGKILAEGI-GEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWN  190 (394)
Q Consensus       112 ~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~  190 (394)
                      ++|++++++|+|||..+++ .|+..+++.++|+++.++++.+...+.. .+...++.++|+|||++|+|||||+.+.+++
T Consensus        88 ~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~  166 (495)
T 3b4w_A           88 DLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTETRTG-SYGQSIVSREPVGVVGAIVAWNVPLFLAVNK  166 (495)
T ss_dssp             HHHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHTCGGGSCSEEEEEE-TTEEEEEEEEECCEEEEECCSSSHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCC-CCceEEEEEccCceEEEECCCcchHHHHHHH
Confidence            9999999999999999997 8999999999999999988877654322 2345678999999999999999999999999


Q ss_pred             HHHHh----------------------------------------------------------------hHHHHHh----
Q psy3652         191 AAIAL----------------------------------------------------------------VGVAVQS----  202 (394)
Q Consensus       191 ~~~aL----------------------------------------------------------------~g~~i~~----  202 (394)
                      +++||                                                                +|+.|++    
T Consensus       167 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~  246 (495)
T 3b4w_A          167 IAPALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPGGIETGQALTSNPDIDMFTFTGSSAVGREVGRRAAE  246 (495)
T ss_dssp             HHHHHHTTCEEEEECBTTSCHHHHHHHHHHHHTTCCTTSEEECCBSHHHHHHHTTCTTCCEEEEESCHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCEEEEecCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhhh
Confidence            99999                                                                6777765    


Q ss_pred             hhhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc---------------------------
Q psy3652         203 RFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK---------------------------  255 (394)
Q Consensus       203 ~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~---------------------------  255 (394)
                      ++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++                           
T Consensus       247 ~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~  326 (495)
T 3b4w_A          247 MLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPSDPAAQ  326 (495)
T ss_dssp             TTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHSCBCCTTCTTCC
T ss_pred             cCCceeecCCCcceEEECCCCCHHHHHHHHHHHHhhcCCCCCCCCeEEEEcccHHHHHHHHHHHHHHhcCCCCCccCCCc
Confidence            46899999999999999999999999999999999999999999999999999                           


Q ss_pred             --------------------------c-----CC---CCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHH
Q psy3652         256 --------------------------K-----ID---RPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAIT  301 (394)
Q Consensus       256 --------------------------~-----~~---~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~  301 (394)
                                                .     ..   ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus       327 ~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~  406 (495)
T 3b4w_A          327 IGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIA  406 (495)
T ss_dssp             BCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHH
T ss_pred             cCCCcCHHHHHHHHHHHHHHHhCCCEEEecCcccccccCCceeCCEEecCCCCCChhhhcccccceEEEEecCCHHHHHH
Confidence                                      0     01   1489999999999999999999999999999999999999999


Q ss_pred             HHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEEec
Q psy3652         302 WNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTINH  381 (394)
Q Consensus       302 ~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~~~  381 (394)
                      ++|+++|||++||||+|.+++++++  .++++|+|+||+++  ..+.+||||+|.||+|+++|.+++++|++.|+|++++
T Consensus       407 ~aN~~~~gL~a~v~t~d~~~a~~~~--~~l~aG~V~iN~~~--~~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~k~v~~~~  482 (495)
T 3b4w_A          407 IANDSVYGLAGSVWTTDVPKGIKIS--QQIRTGTYGINWYA--FDPGSPFGGYKNSGIGRENGPEGVEHFTQQKSVLLPM  482 (495)
T ss_dssp             HHHCSSCCSCCEEECSCHHHHHHHH--HHSCCSCCEESSCC--CCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEECCT
T ss_pred             HHhcCCCCeEEEEECCCHHHHHHHH--HhCCEeEEEECCCC--CCCCCCCCCCCCCCcCccchHHHHHHhcceeEEEEcc
Confidence            9999999999999999999999999  88999999999864  5678999999999999999999999999999999876


Q ss_pred             CCc
Q psy3652         382 GKE  384 (394)
Q Consensus       382 ~~~  384 (394)
                      +.+
T Consensus       483 ~~~  485 (495)
T 3b4w_A          483 GYT  485 (495)
T ss_dssp             TCC
T ss_pred             Ccc
Confidence            443

>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*

Probab=100.00  E-value=7.8e-76  Score=597.30  Aligned_cols=351  Identities=23%  Similarity=0.406  Sum_probs=316.8

Q ss_pred             hhcCCCCCCCCCceeCCeeccCCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHH
Q psy3652          27 KELGLSGSVNPGVYDGTSWKANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDA  106 (394)
Q Consensus        27 ~~~~~~~~~~~~~~i~G~~~~~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~  106 (394)
                      ..|+...++ .++||||+|+.+..+++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|+++++.
T Consensus         4 ~~~~~~~~~-~~~~i~g~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~   82 (487)
T 2w8n_A            4 AGLSAALLR-TDSFVGGRWLPAAATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCRWREVSAKERSSLLRKWYNL   82 (487)
T ss_dssp             ----CCCCC-CSEEETTEEECCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHH
T ss_pred             cccCccccc-cCeeECCEEecCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHH
Confidence            334444333 6789999998443889999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhCHHHHHHHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHh
Q psy3652         107 LRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAV  186 (394)
Q Consensus       107 l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~  186 (394)
                      |++++++|++++++|+|||..+++.|+..+++.++|+++.++++.++..+...++...++.++|+|||++|+|||||+.+
T Consensus        83 l~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~  162 (487)
T 2w8n_A           83 MIQNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAM  162 (487)
T ss_dssp             HHHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCCEEECCSCTTCEEEEEEEECCEEEEECCSSSTTHH
T ss_pred             HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceEEEEECCCcchHHH
Confidence            99999999999999999999999999999999999999998887776544323455678899999999999999999999


Q ss_pred             HHHHHHHHh--------------------------------------------------------------------hHH
Q psy3652         187 YGWNAAIAL--------------------------------------------------------------------VGV  198 (394)
Q Consensus       187 ~~~~~~~aL--------------------------------------------------------------------~g~  198 (394)
                      .++++++||                                                                    +|+
T Consensus       163 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~  242 (487)
T 2w8n_A          163 ITRKVGAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGK  242 (487)
T ss_dssp             HHHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCCHHHHHHHHHHHTTCTTEEEEEEEECHHHHH
T ss_pred             HHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCeEEEEecCCCCcHHHHHHHHhCCCcCEEEEeCCHHHHH
Confidence            999999999                                                                    566


Q ss_pred             HHHh----hhhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc--------------c-C--
Q psy3652         199 AVQS----RFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK--------------K-I--  257 (394)
Q Consensus       199 ~i~~----~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~--------------~-~--  257 (394)
                      .|++    ++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++              . +  
T Consensus       243 ~i~~~aa~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~  322 (487)
T 2w8n_A          243 ILLHHAANSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRV  322 (487)
T ss_dssp             HHHHHHHTTTCEEEEEECEEEEEEECTTSCHHHHHHHHHHHHTCCCSCCCSEEEEEEEEHHHHHHHHHHHHHHHHHHCCB
T ss_pred             HHHHHHhccCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCCEEEEcccHHHHHHHHHHHHHHhhccc
Confidence            6654    46899999999999999999999999999999999999999999999999998              1 0  


Q ss_pred             ------------------------------------------CCCCc-eecCeEEEcCCCCCcccccccccceEEEEeeC
Q psy3652         258 ------------------------------------------DRPGY-FVEPTIVTGLPHNSRVVHRETFAPIVYVFPFD  294 (394)
Q Consensus       258 ------------------------------------------~~~g~-~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~  294 (394)
                                                                ...|+ |++|||+.+++++|++++||+||||++|++|+
T Consensus       323 G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gg~~~~~g~~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~  402 (487)
T 2w8n_A          323 GNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRHQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFD  402 (487)
T ss_dssp             SCTTSTTCCBCCCSSHHHHHHHHHHHHHHHTTTCEEEECCSBCTTCTTCBCCEEEEEECGGGGTTCTTCCSSEEEEEEES
T ss_pred             CCcccccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCceECCEEEecCCCcchhhhcccccceEEEEEeC
Confidence                                                      01378 99999999999999999999999999999999


Q ss_pred             CHHHHHHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhhe
Q psy3652         295 SLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRR  374 (394)
Q Consensus       295 ~~~eAi~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~  374 (394)
                      |+||||+++|+++|||++||||+|.+++++++  .++++|+|+||++... .+.+||||+|.||+|+++|.+++++|++.
T Consensus       403 ~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~--~~l~aG~v~vN~~~~~-~~~~PfGG~~~SG~G~~~G~~~l~~f~~~  479 (487)
T 2w8n_A          403 TEEEAIAIANAADVGLAGYFYSQDPAQIWRVA--EQLEVGMVGVNEGLIS-SVECPFGGVKQSGLGREGSKYGIDEYLEL  479 (487)
T ss_dssp             CHHHHHHHHTCTTCCSEEEEECCCHHHHHHHH--HHSCSSEEEESCSCCC-CTTSCBCCSGGGEESCBSTTTGGGGGEEE
T ss_pred             CHHHHHHHHhCCCCCceEEEeCCCHHHHHHHH--HhCCeeeEEEcCCCCC-CCCCCCCCCCCCCcCCCchHHHHHHhcCc
Confidence            99999999999999999999999999999999  8899999999986543 46799999999999999999999999999


Q ss_pred             eEEEEec
Q psy3652         375 STVTINH  381 (394)
Q Consensus       375 k~v~~~~  381 (394)
                      |+|+++.
T Consensus       480 k~v~~~~  486 (487)
T 2w8n_A          480 KYVCYGG  486 (487)
T ss_dssp             EEEEECC
T ss_pred             cEEEEec
Confidence            9998763

>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...

Probab=100.00  E-value=4.9e-76  Score=599.87  Aligned_cols=342  Identities=27%  Similarity=0.516  Sum_probs=315.1

Q ss_pred             CCCceeCCeecc--CCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHH---HhhcCChhhHHHHHHHHHHHHhhC
Q psy3652          36 NPGVYDGTSWKA--NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYA---AWAALPAPRRGEIVRQIGDALRHK  110 (394)
Q Consensus        36 ~~~~~i~G~~~~--~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~---~w~~~~~~~R~~~L~~~a~~l~~~  110 (394)
                      ..++||||+|+.  ++.+++++||+||+++++++.++.+|+++|+++|++||+   .|+.+|.++|.++|++++++|+++
T Consensus        19 ~~~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~   98 (500)
T 1o04_A           19 CNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERD   98 (500)
T ss_dssp             CCSEEETTEEECCTTCCEEEEEETTTTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred             ccCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHHH
Confidence            345899999983  467899999999999999999999999999999999999   899999999999999999999999


Q ss_pred             HHHHHHHHHHHcCCChHHhH-HHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHH
Q psy3652         111 LVPLGQLVSLEMGKILAEGI-GEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGW  189 (394)
Q Consensus       111 ~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~  189 (394)
                      +++|++++++|+|||..++. .|+..+++.++|+++.++++.+...+. .++...++.++|+|||++|+|||||+.+.++
T Consensus        99 ~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~g~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~  177 (500)
T 1o04_A           99 RTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPI-DGDFFSYTRHEPVGVCGQIIPWNFPLLMQAW  177 (500)
T ss_dssp             HHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEECC-SSSEEEEEEEEECCEEEEECCSSSHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCcceec-CCCceEEEEEecCCcEEEECCCCchHHHHHH
Confidence            99999999999999999884 699999999999999988877654443 2345567899999999999999999999999


Q ss_pred             HHHHHh-----------------------------------------------------------------hHHHHHh--
Q psy3652         190 NAAIAL-----------------------------------------------------------------VGVAVQS--  202 (394)
Q Consensus       190 ~~~~aL-----------------------------------------------------------------~g~~i~~--  202 (394)
                      ++++||                                                                 +|+.|++  
T Consensus       178 ~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~a  257 (500)
T 1o04_A          178 KLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAA  257 (500)
T ss_dssp             HHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHH
T ss_pred             HHHHHHHcCCEEEEECCccChHHHHHHHHHHHHhCCCcCeEEEEecCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhh
Confidence            999999                                                                 7777764  


Q ss_pred             ---hhhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc------------------------
Q psy3652         203 ---RFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK------------------------  255 (394)
Q Consensus       203 ---~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~------------------------  255 (394)
                         ++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++                        
T Consensus       258 a~~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~  337 (500)
T 1o04_A          258 GSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDS  337 (500)
T ss_dssp             HHTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCTTST
T ss_pred             hhhcCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhccCCCCCCCCCEEEEehhHHHHHHHHHHHHHHhCcCCCcccc
Confidence               46899999999999999999999999999999999999999999999999998                        


Q ss_pred             ------------------------------c----C-CCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHH
Q psy3652         256 ------------------------------K----I-DRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAI  300 (394)
Q Consensus       256 ------------------------------~----~-~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi  300 (394)
                                                    .    . +..|+|+.|||+.+++++|++++||+||||++|++|+|+||||
T Consensus       338 ~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi  417 (500)
T 1o04_A          338 KTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVV  417 (500)
T ss_dssp             TCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHH
T ss_pred             cCccCcccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEeCCCCCChhhhCcccceEEEEEeeCCHHHHH
Confidence                                          0    0 1248999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEEe
Q psy3652         301 TWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTIN  380 (394)
Q Consensus       301 ~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~~  380 (394)
                      +++|+++|||++||||+|.+++++++  .++++|+|+||++.. ..+.+||||+|.||+|+++|.+++++|++.|+|+++
T Consensus       418 ~~aN~~~~gL~a~v~t~d~~~a~~~~--~~l~aG~V~iN~~~~-~~~~~PfGG~k~SG~G~~~G~~gl~~f~~~K~v~~~  494 (500)
T 1o04_A          418 GRANNSTYGLAAAVFTKDLDKANYLS--QALQAGTVWVNCYDV-FGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTVK  494 (500)
T ss_dssp             HHHHCSSCCSEEEEECSBHHHHHHHH--HHCCSSEEEESCSSC-CCTTSCBCCSGGGEESCBSTGGGGGGGEEEEEEEEE
T ss_pred             HHHhcCCCCceEEEECCCHHHHHHHH--HhCCeeEEEECCCCC-CCCCCCCCCcCCCCCCccchHHHHHHhcceEEEEEe
Confidence            99999999999999999999999999  889999999998643 456899999999999999999999999999999987


Q ss_pred             c
Q psy3652         381 H  381 (394)
Q Consensus       381 ~  381 (394)
                      +
T Consensus       495 ~  495 (500)
T 1o04_A          495 V  495 (500)
T ss_dssp             C
T ss_pred             c
Confidence            5

>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*

Probab=100.00  E-value=2.9e-76  Score=602.08  Aligned_cols=357  Identities=25%  Similarity=0.339  Sum_probs=323.8

Q ss_pred             hhhhhcCCCCCCCCCceeCCeeccCCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHH-HhhcCChhhHHHHHHH
Q psy3652          24 PFLKELGLSGSVNPGVYDGTSWKANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYA-AWAALPAPRRGEIVRQ  102 (394)
Q Consensus        24 ~~~~~~~~~~~~~~~~~i~G~~~~~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~-~w~~~~~~~R~~~L~~  102 (394)
                      -.+++.... + ..++||||+|+.+..+++++||+||+++++++.++.+|+++|+++|++||+ .|+.+|.++|.++|++
T Consensus         8 ~~~~~~~~~-~-~~~~~i~g~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~   85 (501)
T 1uxt_A            8 GVIKEKGGV-P-VYPSYLAGEWGGSGQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRK   85 (501)
T ss_dssp             TTSEEETTE-E-EECEECSSSEECCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHTHHHHHHTSCHHHHHHHHHH
T ss_pred             HHHHHhcCC-c-ccceeECCEEecCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhhhhccCCHHHHHHHHHH
Confidence            367775544 3 557899999985447899999999999999999999999999999999999 9999999999999999


Q ss_pred             HHHHHhhCHHHHHHHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCcccCCC--CC--CceeEeeeccceeEEEEc
Q psy3652         103 IGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSE--RP--GHVLLENWNPLGVVGIIS  178 (394)
Q Consensus       103 ~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~--~~--~~~~~~~~~P~GVV~~I~  178 (394)
                      ++++|++++++|++++++|+|||..+++.|+..+++.++|+++.++++.++..+..  ..  +...++.++|+|||++|+
T Consensus        86 ~a~~l~~~~~ela~~~~~e~Gk~~~ea~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~  165 (501)
T 1uxt_A           86 AADIIERNLDVFAEVLVMNAGKPKSAAVGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAIT  165 (501)
T ss_dssp             HHHHHHHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHTGGGGGGGTCCEEEESTTSSTTTTEEEEEEEEECSEEEEEC
T ss_pred             HHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCcCceEEEEEeeccEEEEEC
Confidence            99999999999999999999999999999999999999999999888766654432  12  335678999999999999


Q ss_pred             cCCchhHhHHHHHHHHh---------------------------------------------------------------
Q psy3652         179 AFNFPVAVYGWNAAIAL---------------------------------------------------------------  195 (394)
Q Consensus       179 p~N~P~~~~~~~~~~aL---------------------------------------------------------------  195 (394)
                      |||||+.+.++++++||                                                               
T Consensus       166 PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~g~~L~~~~~vd~I~FTGS~  245 (501)
T 1uxt_A          166 PFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGST  245 (501)
T ss_dssp             CTTSTTHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTCTTCCEEEEESCH
T ss_pred             CCccHHHHHHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHhCCCcCEEEEeCcH
Confidence            99999999999999999                                                               


Q ss_pred             -hHHHHHhh--hhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc-----------------
Q psy3652         196 -VGVAVQSR--FGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK-----------------  255 (394)
Q Consensus       196 -~g~~i~~~--~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~-----------------  255 (394)
                       +|+.|++.  +||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++                 
T Consensus       246 ~~G~~i~~~aal~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~  325 (501)
T 1uxt_A          246 EVGERVVKVGGVKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLR  325 (501)
T ss_dssp             HHHHHHHHHHCSSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCC
T ss_pred             HHHHHHHHhcCCCeEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhcCCCCCCcCCcEEEeccchHHHHHHHHHHHHHhcc
Confidence             77888764  5899999999999999999999999999999999999999999999999999                 


Q ss_pred             ------------------------------------c-CCC--CC-ceecCeEEEcCC---CCCcccccccccceEEEEe
Q psy3652         256 ------------------------------------K-IDR--PG-YFVEPTIVTGLP---HNSRVVHRETFAPIVYVFP  292 (394)
Q Consensus       256 ------------------------------------~-~~~--~g-~~~~Ptvl~~v~---~~~~i~~eE~FGPvl~v~~  292 (394)
                                                          . ...  .| +|++|||+.+++   ++|++++||+||||++|++
T Consensus       326 ~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~g~~~~~Ptvl~~v~~~~~~~~i~~eEiFGPVl~v~~  405 (501)
T 1uxt_A          326 VGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGPTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVE  405 (501)
T ss_dssp             BSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCBCSSSCBCCEEEECCHHHHTTSHHHHSCCCSSEEEEEE
T ss_pred             CCCccccCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCceECCEEEeCCCCCCCcCHHHhCcccCceEEEEe
Confidence                                                0 001  37 999999999999   9999999999999999999


Q ss_pred             eCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhh
Q psy3652         293 FDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYC  372 (394)
Q Consensus       293 ~~~~~eAi~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~  372 (394)
                      |+|+||||+++|+++|||++||||+|.+++++++  .++++|+|+||++.+...+.+||||+|.||+|+++|.+++++|+
T Consensus       406 ~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~--~~l~~G~V~iN~~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~f~  483 (501)
T 1uxt_A          406 VKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAV--RLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGYAVEAVT  483 (501)
T ss_dssp             ESSHHHHHHHHHTSSEESEEEEECCCHHHHHHHH--HHCCSSEEEETSCCCCTTSSSCBCCEETTEESCBSTTTTHHHHE
T ss_pred             eCCHHHHHHHHhcCCCCcEEEEeCCCHHHHHHHH--HhCCEeeEEEeCCCCCCCCCCCCCCcCCCCCCccChHHHHHHhC
Confidence            9999999999999999999999999999999999  88999999999862345678999999999999999999999999


Q ss_pred             heeEEEEecCCc
Q psy3652         373 RRSTVTINHGKE  384 (394)
Q Consensus       373 ~~k~v~~~~~~~  384 (394)
                      +.|+|++++..+
T Consensus       484 ~~k~v~~~~~~~  495 (501)
T 1uxt_A          484 AYKTIVFNYKGK  495 (501)
T ss_dssp             EEEEEEEECTTS
T ss_pred             ceeEEEEecCCC
Confidence            999999986443

>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*

Probab=100.00  E-value=6.7e-75  Score=594.32  Aligned_cols=343  Identities=26%  Similarity=0.446  Sum_probs=314.6

Q ss_pred             CCCceeCCeeccCCCeeeeecCC-CCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHH
Q psy3652          36 NPGVYDGTSWKANGEIIPSINPS-TGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPL  114 (394)
Q Consensus        36 ~~~~~i~G~~~~~~~~~~v~nP~-tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l  114 (394)
                      ..++||||+|+.++.+++++||+ ||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|++++++|++++++|
T Consensus        37 ~~~~~i~G~~~~~~~~~~~~nP~~t~~~i~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el  116 (516)
T 1uzb_A           37 HYPLYIGGEWVDTKERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDRSRLLLKAAALMRRRKREL  116 (516)
T ss_dssp             EECEEETTEEECCSSEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred             ccceeECCEEecCCCeEEEECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            35689999998667889999999 69999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCcccC-CCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHH
Q psy3652         115 GQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILP-SERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAI  193 (394)
Q Consensus       115 ~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~-~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~  193 (394)
                      ++++++|+|||..+++.|+..+++.++|+++.++++.+...+ ...++...++.++|+|||++|+|||||+.+.++++++
T Consensus       117 a~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~  196 (516)
T 1uzb_A          117 EATLVYEVGKNWVEASADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVG  196 (516)
T ss_dssp             HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHGGGCSSCCCCCCCTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHH
T ss_pred             HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCCCCceEEEEEeccceEEEECCCccHHHHHHHHHHH
Confidence            999999999999999999999999999999998887765432 2234456678999999999999999999999999999


Q ss_pred             Hh-----------------------------------------------------------------hHHHHHh------
Q psy3652         194 AL-----------------------------------------------------------------VGVAVQS------  202 (394)
Q Consensus       194 aL-----------------------------------------------------------------~g~~i~~------  202 (394)
                      ||                                                                 +|+.|++      
T Consensus       197 ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~~  276 (516)
T 1uzb_A          197 PVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRLA  276 (516)
T ss_dssp             HHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHTSCC
T ss_pred             HHHcCCeEEEeCCCCCHHHHHHHHHHHHHhCCCcCeEEEEeCCCchhhhhhhcCCCcCEEEecCCHHHHHHHHHHhhhcc
Confidence            99                                                                 7787764      


Q ss_pred             ----hhhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc----------------c------
Q psy3652         203 ----RFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK----------------K------  256 (394)
Q Consensus       203 ----~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~----------------~------  256 (394)
                          ++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++                .      
T Consensus       277 ~~~~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~  356 (516)
T 1uzb_A          277 PGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVGPAEE  356 (516)
T ss_dssp             TTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCGGG
T ss_pred             ccccccceeEEecCCccceeECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEchHHHHHHHHHHHHHHHhccCCCCcc
Confidence                36789999999999999999999999999999999999999999999999998                0      


Q ss_pred             ------------------------------C-----CCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHH
Q psy3652         257 ------------------------------I-----DRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAIT  301 (394)
Q Consensus       257 ------------------------------~-----~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~  301 (394)
                                                    .     +..|+|+.|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus       357 ~~~~Gpli~~~~~~~v~~~i~~a~~~G~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~  436 (516)
T 1uzb_A          357 NPDLGPVVSAEQERKVLSYIEIGKNEGQLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALE  436 (516)
T ss_dssp             CCSBCCCSCHHHHHHHHHHHHHHTTTSEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHH
T ss_pred             ccccCCCCCHHHHHHHHHHHHHHHHCCCEEECCccCCCCCcEECCEEEECCCCCCHhhhccccCceEEEEEeCCHHHHHH
Confidence                                          0     12489999999999999999999999999999999999999999


Q ss_pred             HHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCC-CCCCCCCccCCCCCCCCC-CchHHHHHhhhheeEEEE
Q psy3652         302 WNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTN-GAEIGGAFGGEKYTGGGR-ESGSDSWKQYCRRSTVTI  379 (394)
Q Consensus       302 ~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~-~~~~~~pfGG~~~SG~G~-~~g~~~l~~f~~~k~v~~  379 (394)
                      ++|+++|||++||||+|.+++++++  .++++|+|+||+++. ...+.+||||+|.||+|+ ++|.+++++|++.|+|++
T Consensus       437 ~aN~~~~gL~a~v~t~d~~~a~~~~--~~l~aG~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~f~~~k~v~~  514 (516)
T 1uzb_A          437 VANDTPYGLTGGVYSRKREHLEWAR--REFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVAE  514 (516)
T ss_dssp             HHHCSSCCSEEEEECSCHHHHHHHH--HHSCCSEEEESSCSCCCCTTTSCBCCSGGGBSCCCBTSHHHHHTTEEEEEEEE
T ss_pred             HHhcCCCCceEEEECCCHHHHHHHH--HhCCEeEEEEeCCCCCCCCCCCCCCCcCcCCCCCccchHHHHHHcCCeeEEEe
Confidence            9999999999999999999999999  889999999998543 345678999999999995 789999999999999987


Q ss_pred             e
Q psy3652         380 N  380 (394)
Q Consensus       380 ~  380 (394)
                      +
T Consensus       515 ~  515 (516)
T 1uzb_A          515 R  515 (516)
T ss_dssp             E
T ss_pred             c
Confidence            5

>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}

Probab=100.00  E-value=2.6e-75  Score=593.65  Aligned_cols=343  Identities=27%  Similarity=0.400  Sum_probs=314.3

Q ss_pred             CCceeCCeecc--CCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHH
Q psy3652          37 PGVYDGTSWKA--NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPL  114 (394)
Q Consensus        37 ~~~~i~G~~~~--~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l  114 (394)
                      .++||||+|+.  ++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|++++++|++++++|
T Consensus         6 ~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el   85 (486)
T 1t90_A            6 LKNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFKTWSKVAVPRRARILFNFQQLLSQHKEEL   85 (486)
T ss_dssp             CCEEETTEEECCSCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTTHHHH
T ss_pred             cceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            46899999973  5678999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHH
Q psy3652         115 GQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIA  194 (394)
Q Consensus       115 ~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~a  194 (394)
                      ++++++|+|||..+++.|+..+++.++|+++..+.+.++..+...++...++.++|+|||++|+|||||+.+.++++++|
T Consensus        86 a~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~A  165 (486)
T 1t90_A           86 AHLITIENGKNTKEALGEVGRGIENVEFAAGAPSLMMGDSLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMFPMA  165 (486)
T ss_dssp             HHHHHHHHCCCHHHHHHHHHHHHHHHHHHTTHHHHHCEEEEEEEETTEEEEEEEEECSEEEEECCSSCTTHHHHHHHHHH
T ss_pred             HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEecccCEEEEECCCchhHHHHHHHHHHH
Confidence            99999999999999999999999999999987777665543321234456788999999999999999999999999999


Q ss_pred             h----------------------------------------------------------------hHHHHHh----hhhh
Q psy3652         195 L----------------------------------------------------------------VGVAVQS----RFGK  206 (394)
Q Consensus       195 L----------------------------------------------------------------~g~~i~~----~~~~  206 (394)
                      |                                                                +|+.|++    ++||
T Consensus       166 LaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~I~fTGS~~~g~~i~~~aa~~~~p  245 (486)
T 1t90_A          166 IALGNTFILKPSERTPLLTEKLVELFEKAGLPKGVFNVVYGAHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSENLKR  245 (486)
T ss_dssp             HHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCCSHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHHHTTCE
T ss_pred             HHcCCEEEEECCCCChHHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHhccCCc
Confidence            9                                                                7777765    4789


Q ss_pred             hccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCce-EEEecc------------------------------
Q psy3652         207 LLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRR-LFLHKK------------------------------  255 (394)
Q Consensus       207 ~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~r-v~V~~~------------------------------  255 (394)
                      +++|||||||+||++|||++.|++.+++++|.|+||.|++++| ||||++                              
T Consensus       246 v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvv~v~~~~d~f~~~l~~~~~~~~vG~~~~~~~~~gpl  325 (486)
T 1t90_A          246 VQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGIADEFMAKLQEKVADIKIGNGLDDGVFLGPV  325 (486)
T ss_dssp             EEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCTTSTTCCBCCC
T ss_pred             EEeccCCCCcEEECCCCCHHHHHHHHHHHHHhCCCCCcccCCeeEEecCCHHHHHHHHHHHHHhcccCCCCccCCccCCC
Confidence            9999999999999999999999999999999999999999999 999986                              


Q ss_pred             -----------------------c-C-----CCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcC
Q psy3652         256 -----------------------K-I-----DRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEV  306 (394)
Q Consensus       256 -----------------------~-~-----~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~  306 (394)
                                             . .     ...|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|++
T Consensus       326 i~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPvl~v~~~~~~~eai~~aN~~  405 (486)
T 1t90_A          326 IREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKS  405 (486)
T ss_dssp             SCHHHHHHHHHHHHHHHHHTCEEEECSSSSCCSSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHHS
T ss_pred             CCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCCEECCEEEeCCCCCCHhhcCcccCceEEEEEeCCHHHHHHHHhCC
Confidence                                   0 0     0248999999999999999999999999999999999999999999999


Q ss_pred             CCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCC--CCchHHHHHhhhheeEEEEec
Q psy3652         307 KQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGG--RESGSDSWKQYCRRSTVTINH  381 (394)
Q Consensus       307 ~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G--~~~g~~~l~~f~~~k~v~~~~  381 (394)
                      +|||++||||+|.+++++++  .++++|+|+||++.....+.+||||+|.||+|  +++|.+++++|++.|+|++++
T Consensus       406 ~~gL~a~v~t~d~~~a~~~~--~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~G~~~~~g~~g~~~~~~~k~v~~~~  480 (486)
T 1t90_A          406 EFANGACLFTSNSNAIRYFR--ENIDAGMLGINLGVPAPMAFFPFSGWKSSFFGTLHANGKDSVDFYTRKKVVTARY  480 (486)
T ss_dssp             SEESEEEEECCBHHHHHHHH--HHCCCSEEEESCSCCCCCTTSCCCCEETTEESSSCSSHHHHHHHTEEEEEEEEEC
T ss_pred             CCCeEEEEEcCCHHHHHHHH--HhCCcCeEEECCCCCCCCCCCCcCCCCcCCCCCCccchHHHHHHhhceEEEEEec
Confidence            99999999999999999999  88999999999865444567999999999999  899999999999999999876

>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}

Probab=100.00  E-value=3.4e-75  Score=591.49  Aligned_cols=328  Identities=29%  Similarity=0.376  Sum_probs=306.9

Q ss_pred             eeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCChHHhH
Q psy3652          51 IIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGI  130 (394)
Q Consensus        51 ~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~  130 (394)
                      +++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|++++++|++++++|++++++|+|||..+++
T Consensus         5 ~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~   84 (484)
T 3ros_A            5 KYQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYKKWRHEEPASRAEILHDIANALKEHEDELAKMMTLEMGKLLSESK   84 (484)
T ss_dssp             CCEEEETTTTEEEEECCCCCHHHHHHHHHHHHHHHHHHTTSCTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH
T ss_pred             ccceeCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH
Confidence            58999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh---------------
Q psy3652         131 GEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL---------------  195 (394)
Q Consensus       131 ~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL---------------  195 (394)
                      .|+..+++.++|+++.++++.+...+.. .+...++.++|+|||++|+|||||+.+.++++++||               
T Consensus        85 ~ev~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp  163 (484)
T 3ros_A           85 EEVELCVSICNYYADHGPEMLKPTKLNS-DLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVP  163 (484)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTSCEEECC-TTSEEEEEEECCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTCH
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCeeccC-CCceeEEEecCCceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCh
Confidence            9999999999999999988776654432 355678899999999999999999999999999999               


Q ss_pred             -------------------------------------------------hHHHHHh----hhhhhccccCCCCeEEEecC
Q psy3652         196 -------------------------------------------------VGVAVQS----RFGKLLLELGGNNAIIVNED  222 (394)
Q Consensus       196 -------------------------------------------------~g~~i~~----~~~~~~lElgGk~p~iV~~d  222 (394)
                                                                       +|+.|++    ++||+++|||||||+||++|
T Consensus       164 ~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~L~~~p~vd~I~fTGS~~~G~~i~~~aa~~lk~v~lELGGk~p~iV~~d  243 (484)
T 3ros_A          164 GSAALTAKIIKRAGAPEGSLINLYPSYDQLADIIADPRIQGVALTGSERGGSAVAEAAGKNLKKSTMELGGNDAFIVLDD  243 (484)
T ss_dssp             HHHHHHHHHHHHHTCCTTSEEEECCCHHHHHHHHTSTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCCEEEECTT
T ss_pred             HHHHHHHHHHHHhCcCcCeEEEEeCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHhccCCceEeecCCCCcceeCCC
Confidence                                                             6777764    56899999999999999999


Q ss_pred             CCHHHHHHHHHHHhhCcCCCcccCCceEEEecc-----------------------------------------------
Q psy3652         223 ADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK-----------------------------------------------  255 (394)
Q Consensus       223 ADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~-----------------------------------------------  255 (394)
                      ||++.|++.+++++|.|+||.|++++|||||++                                               
T Consensus       244 ADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a  323 (484)
T 3ros_A          244 ADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKLEAQVKEA  323 (484)
T ss_dssp             CCHHHHHHHHTTTTTGGGGCCTTSCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHhcCCCCCccCCceEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999                                               


Q ss_pred             ------------cCCCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHH
Q psy3652         256 ------------KIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLF  323 (394)
Q Consensus       256 ------------~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~~gLsa~v~t~d~~~a~  323 (394)
                                  ..+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++
T Consensus       324 ~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~  403 (484)
T 3ros_A          324 IDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDIDRAK  403 (484)
T ss_dssp             HHTTCEEEEECCCCCCSSCCCCCEEEECCCTTSTTTTSCCCSSEEEEEEESSHHHHHHHHHSSSCCSCEEEECSCHHHHH
T ss_pred             HHcCCeEEecCCcCCCCCceeCCeEeecCCCCCcccccccccceEEEEEcCCHHHHHHHHhCCCCCcEEEEECCCHHHHH
Confidence                        01246899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEEecC
Q psy3652         324 KWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTINHG  382 (394)
Q Consensus       324 ~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~~~~  382 (394)
                      +++  .++++|+|+||+++ ...+.+||||+|.||+|+++|++++++|++.|+|+++..
T Consensus       404 ~~~--~~l~aG~V~vN~~~-~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~~  459 (484)
T 3ros_A          404 KVS--AQIETGMTVINGRW-ITSGELPFGGIKKSGYGRELSGLGLMAFVNEHLVIDVTK  459 (484)
T ss_dssp             HHH--HHSCSSCCEETSCC-CCCTTSCBCCSGGGEESCBSHHHHHTTTCEEEEEEECGG
T ss_pred             HHH--HhCccceEEECCCC-CCCCCCCcCCcCcccCCcCchHHHHHHhheeEEEEECCC
Confidence            999  88999999999864 456789999999999999999999999999999998754

>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}

Probab=100.00  E-value=4.3e-75  Score=591.45  Aligned_cols=338  Identities=26%  Similarity=0.386  Sum_probs=289.8

Q ss_pred             CCCCCCceeCCeecc--CCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhC
Q psy3652          33 GSVNPGVYDGTSWKA--NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHK  110 (394)
Q Consensus        33 ~~~~~~~~i~G~~~~--~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~  110 (394)
                      |....++||||+|+.  ++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|+++++.|+++
T Consensus         4 m~~~~~~~i~G~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~   83 (478)
T 3ty7_A            4 MRDYTKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYLEFRHTSVKERQALLDKIVKEYENR   83 (478)
T ss_dssp             CEECCEEEETTEEEECSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHT
T ss_pred             hhhhhhheECCEEecCCCCCeEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHh
Confidence            344567999999973  678999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHcCCChHHh-HHHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHH
Q psy3652         111 LVPLGQLVSLEMGKILAEG-IGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGW  189 (394)
Q Consensus       111 ~~~l~~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~  189 (394)
                      +++|++++++|+|||..++ ..|+..+++.++++++.++++.+...     ....++.++|+|||++|+|||||+.+.++
T Consensus        84 ~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~-----~~~~~~~~~P~GVv~~I~PwN~P~~~~~~  158 (478)
T 3ty7_A           84 KDDIVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFEER-----RGDDLVVKEAIGVSGLITPWNFPTNQTSL  158 (478)
T ss_dssp             HHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEE-----ETTEEEEEEECCCEEEECCSSSTTHHHHH
T ss_pred             HHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhcccC-----CccceEEecCceEEEEECCCcchHHHHHH
Confidence            9999999999999999999 78999999999999999888765432     12457789999999999999999999999


Q ss_pred             HHHHHh-----------------------------------------------------------------hHHHHHh--
Q psy3652         190 NAAIAL-----------------------------------------------------------------VGVAVQS--  202 (394)
Q Consensus       190 ~~~~aL-----------------------------------------------------------------~g~~i~~--  202 (394)
                      ++++||                                                                 +|+.|++  
T Consensus       159 ~~~~ALaaGN~VVlKps~~tp~t~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~fTGS~~~G~~i~~~a  238 (478)
T 3ty7_A          159 KLAAAFAAGSPVVLKPSEETPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEKA  238 (478)
T ss_dssp             HHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCCCTTTTHHHHHHCTTCCEEEECSCHHHHCC--CST
T ss_pred             HHHHHHHcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEECCChHHHHHHHhCCCcCEEEEECcHHHHHHHHHHH
Confidence            999999                                                                 4555554  


Q ss_pred             --hhhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc-------------------------
Q psy3652         203 --RFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK-------------------------  255 (394)
Q Consensus       203 --~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~-------------------------  255 (394)
                        +++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++                         
T Consensus       239 a~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~  318 (478)
T 3ty7_A          239 AKDFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPREDG  318 (478)
T ss_dssp             TTTTCEEECCCCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred             HhcCCceEEecCCCCCcccCCCCCHHHHHHHHHHHHHHhCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCC
Confidence              46899999999999999999999999999999999999999999999999999                         


Q ss_pred             -----------------------------cC-C-------CCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHH
Q psy3652         256 -----------------------------KI-D-------RPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDE  298 (394)
Q Consensus       256 -----------------------------~~-~-------~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~e  298 (394)
                                                   .. .       ..|+|++|||+.+++++|++++||+||||++|++|+|+||
T Consensus       319 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~e  398 (478)
T 3ty7_A          319 TQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDLDE  398 (478)
T ss_dssp             CCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHH
T ss_pred             CccCCCcCHHHHHHHHHHHHHHHHCCCEEEecCccCccccCCCceeCCEEEecCCCCCcccCceeECceeEEEecCCHHH
Confidence                                         00 0       2589999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEE
Q psy3652         299 AITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVT  378 (394)
Q Consensus       299 Ai~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~  378 (394)
                      ||+++|+++|||++||||+|.+++++++  .++++|+|+||+  ....+.+||||+|.||+|+++|.+++++|++.|+|+
T Consensus       399 Ai~~an~~~~gL~a~v~t~d~~~a~~~~--~~l~~G~v~vN~--~~~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~v~  474 (478)
T 3ty7_A          399 AIQIANDTKYGLAGYVIGKDKETLHKVA--RSIEAGTVEINE--AGRKPDLPFGGYKQSGLGREWGDYGIEEFLEVKSIA  474 (478)
T ss_dssp             HHHHHTCSSCCSEEEEECSCHHHHHHHH--HHSCSSEEEETT--CC----------------------CCGGGEEEEEEE
T ss_pred             HHHHHhCCCCCceEEEECCCHHHHHHHH--HhCCcCeEEECC--CCCCCCCCcCCcCcCcCCccchHHHHHHhcCeEEEE
Confidence            9999999999999999999999999999  889999999998  344567899999999999999999999999999986


Q ss_pred             E
Q psy3652         379 I  379 (394)
Q Consensus       379 ~  379 (394)
                      .
T Consensus       475 ~  475 (478)
T 3ty7_A          475 G  475 (478)
T ss_dssp             T
T ss_pred             E
Confidence            3

>4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis}

Probab=100.00  E-value=1.7e-74  Score=586.25  Aligned_cols=336  Identities=25%  Similarity=0.384  Sum_probs=304.0

Q ss_pred             CCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCChH
Q psy3652          48 NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILA  127 (394)
Q Consensus        48 ~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~  127 (394)
                      ++++++++||+||+++++++.++++|+++||++|++||+.|+.+|.++|.++|++++++|++++++|++++++|+||+. 
T Consensus         4 ~~~t~~v~nP~tg~~~~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-   82 (474)
T 4h7n_A            4 MTKTIEVRNPRTGKFDYVIIPPPPRLLAQQCNRARRAQSRWQELGVEGRITTLQQWKQAILSRREQLTEALVNDTGRLS-   82 (474)
T ss_dssp             CCCCEEEECTTTCSEEEEECCCCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHSCSH-
T ss_pred             CCCEEeeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcH-
Confidence            5678999999999999999999999999999999999999999999999999999999999999999999999999985 


Q ss_pred             HhHHHHHHHHHHHHHHHHhhhhccC-cccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh-----------
Q psy3652         128 EGIGEVQEFIDICDYAVGLSRTYSG-SILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL-----------  195 (394)
Q Consensus       128 ~a~~ev~~~~~~l~~~a~~~~~~~~-~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL-----------  195 (394)
                      ++..|+..+++.++++++...++.+ .......++......++|+|||++|+|||||+.+.++++++||           
T Consensus        83 ~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~VVlKps  162 (474)
T 4h7n_A           83 ITVLEIDSFLASIDRWCGLAPELLQTSAKNTSIPFIALQQSLVPYPLVGVISPWNFPLTLSMIDTIPALLAGCAVVVKPS  162 (474)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHCCEEEECSSTTEEEEEEEEECSEEEEEECSSSHHHHHHTTHHHHHHHTCEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHHhhhhhcccccccCCCCCCccceEEEEeccEEEEECCCCcHHHHHhcccCcchhcCCceeeccc
Confidence            5567999999999999988766543 3333333455566788999999999999999999999999999           


Q ss_pred             ---------------------------------------------------hHHHHHh----hhhhhccccCCCCeEEEe
Q psy3652         196 ---------------------------------------------------VGVAVQS----RFGKLLLELGGNNAIIVN  220 (394)
Q Consensus       196 ---------------------------------------------------~g~~i~~----~~~~~~lElgGk~p~iV~  220 (394)
                                                                         +|+.|++    ++||+++|||||||+||+
T Consensus       163 ~~tp~~~~~l~~~~~~ag~p~gv~~~v~g~~~~~~~l~~~v~~v~FTGS~~~G~~i~~~aa~~~~~v~lElGGk~p~iV~  242 (474)
T 4h7n_A          163 EIAPRFVAPLLMALNTVPELRDVLIFVEGGGETGANLINYVDFVCFTGSVATGREVAETAARRFIPAYLELGGKDPAIVL  242 (474)
T ss_dssp             TTSCTTHHHHHHHHTTCTTTTTTEEECCCCHHHHHHHHTTCSEEEEESCHHHHHHHHHHHHHHTCCEEEECCCCEEEEEC
T ss_pred             ccCchHHHHHHhhhhhhcccccceeeccccchhhhhhhhccceEEeccccchhhhhhhhhhcccccccccCCCcCccccC
Confidence                                                               7777764    678999999999999999


Q ss_pred             cCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc---------------------------------------------
Q psy3652         221 EDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK---------------------------------------------  255 (394)
Q Consensus       221 ~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~---------------------------------------------  255 (394)
                      +|||++.|++.+++++|.|+||.|++++|||||++                                             
T Consensus       243 ~dAdl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~  322 (474)
T 4h7n_A          243 ESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQAGIINDHIL  322 (474)
T ss_dssp             TTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCSSGGGCSBCCCSSHHHHHHHHHHHH
T ss_pred             chhhHHHHHHHHHhhhccCCCCceeecccccchHHHHHHHHHHHHHHhhccccCCCcccccccCccccHHHHHHHHHHHH
Confidence            99999999999999999999999999999999998                                             


Q ss_pred             -------------c--CCCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcCCCCcEEEEEcCCHH
Q psy3652         256 -------------K--IDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVT  320 (394)
Q Consensus       256 -------------~--~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~~gLsa~v~t~d~~  320 (394)
                                   .  ....|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+
T Consensus       323 ~a~~~ga~v~~Gg~~~~~~~g~~~~Ptv~~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~  402 (474)
T 4h7n_A          323 DAVEKGAVIHCGGKVEELGGGWWCRPTVMTNVNHSMKVMTEETFGPIMPVMPFPDVEEAVYLANDTIYGLSAAVFAGSED  402 (474)
T ss_dssp             HHHHTTCEEEECCCCEEETTEEECCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSSHH
T ss_pred             HHHhhCceeccCCcccccCCCcccCceeEEeeccccccccccccCcEEEEEEECCHHHHHHHHHcCCCCCeEEEEeCCHH
Confidence                         0  0135899999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhcccccceeEEEEcCCCC-CCCCCCCccCCCCCCCC-CCchHHHHHhhhheeEEEEecCC-ccc
Q psy3652         321 NLFKWLGPQGSDCGLINVNIPTN-GAEIGGAFGGEKYTGGG-RESGSDSWKQYCRRSTVTINHGK-EIT  386 (394)
Q Consensus       321 ~a~~~~~~~~~~~g~V~iN~~~~-~~~~~~pfGG~~~SG~G-~~~g~~~l~~f~~~k~v~~~~~~-~~~  386 (394)
                      ++++++  .++++|+|+||+... ...+..||||+|.||+| +++|.+++++|++.|+|+++... ..|
T Consensus       403 ~a~~~a--~~l~aG~v~iN~~~~~~~~~~~pfgG~~~SG~G~~~~G~~g~~~f~~~k~v~~~~~~~~~p  469 (474)
T 4h7n_A          403 EALKVA--RQLNAGAISINDAALTAMMHEGEKNAFNFSGLGGSRVGAAGLKRFLRKQAFLIKTNSTSDP  469 (474)
T ss_dssp             HHHHHH--TTSCCSEEEESSSCGGGTCCCSCCCCCGGGEESCCSSTTHHHHTTEEEEEEEEECSSSCCT
T ss_pred             HHHHHH--HhCCeeEEEECCCCccCCcCCCCCCCcCCCCCCCCcchHHHHHHhCeEEEEEECCCCCCCC
Confidence            999999  889999999998653 33467899999999998 78999999999999999998643 444

>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A

Probab=100.00  E-value=1.2e-73  Score=578.66  Aligned_cols=330  Identities=28%  Similarity=0.439  Sum_probs=306.0

Q ss_pred             CCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCChH
Q psy3652          48 NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILA  127 (394)
Q Consensus        48 ~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~  127 (394)
                      +...++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..
T Consensus         5 s~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~   84 (462)
T 3etf_A            5 TATQALSVNPATGQTLAAMPWANAQEIEHALSLAASGFKKWKMTSVAQRAQTLRDIGQALRAHAEEMAQCITREMGKPIK   84 (462)
T ss_dssp             -CCCSEEECTTTCCEEEECCCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHH
T ss_pred             ccCccceECCCCCCEEEEecCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH
Confidence            45678999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhHHHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh------------
Q psy3652         128 EGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL------------  195 (394)
Q Consensus       128 ~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL------------  195 (394)
                      +++.|+..+++.++|+++..+++.+.. +...++...++.++|+|||++|+|||||+.+.++++++||            
T Consensus        85 ~a~~ev~~~~~~~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKps~  163 (462)
T 3etf_A           85 QARAEVTKSAALCDWYAEHGPAMLNPE-PTLVENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKHAP  163 (462)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTSCE-ECSSGGGCEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCT
T ss_pred             HHHHHHHHHHHHHHHHHHhHHHhcCCc-ccCCCCceeEEEeecCcEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECCC
Confidence            999999999999999999988776654 2223345678899999999999999999999999999999            


Q ss_pred             ----------------------------------------------------hHHHHHh----hhhhhccccCCCCeEEE
Q psy3652         196 ----------------------------------------------------VGVAVQS----RFGKLLLELGGNNAIIV  219 (394)
Q Consensus       196 ----------------------------------------------------~g~~i~~----~~~~~~lElgGk~p~iV  219 (394)
                                                                          +|+.|++    +++|+++|||||||+||
T Consensus       164 ~tp~~~~~l~~~l~~aglP~gv~~vv~g~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p~iV  243 (462)
T 3etf_A          164 NVTGCAQMIARILAEAGTPAGVYGWVNANNEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIV  243 (462)
T ss_dssp             TCHHHHHHHHHHHHHTTCCBTTEEECCCCHHHHHHHHTSTTEEEEEEESCHHHHHHHHHHHHHTTCCEEEECCCCEEEEE
T ss_pred             CCcHHHHHHHHHHHHhCCCcCeEEEEECCHHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHhccCCceEEEcCCCCccEE
Confidence                                                                6777764    56899999999999999


Q ss_pred             ecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc--------------------------------------------
Q psy3652         220 NEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK--------------------------------------------  255 (394)
Q Consensus       220 ~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~--------------------------------------------  255 (394)
                      ++|||++.|++.+++++|.|+||.|++++|||||++                                            
T Consensus       244 ~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i  323 (462)
T 3etf_A          244 LNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFDLRDELHQQV  323 (462)
T ss_dssp             CTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHhcCCCcccCCcEEEEehhHHHHHHHHHHHHHHhhcCCCCccccCcccCCCCHHHHHHHHHHH
Confidence            999999999999999999999999999999999998                                            


Q ss_pred             ---------------cCCCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcCCCCcEEEEEcCCHH
Q psy3652         256 ---------------KIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVT  320 (394)
Q Consensus       256 ---------------~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~~gLsa~v~t~d~~  320 (394)
                                     ..+..|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+
T Consensus       324 ~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~deAi~~an~~~~gL~a~v~t~d~~  403 (462)
T 3etf_A          324 QASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFTADDT  403 (462)
T ss_dssp             HHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCEEEECSCHH
T ss_pred             HHHHHCCCEEEeCCcccCCCCcEEeeEEEECCCCCChhhcCceeCcEEEEEEcCCHHHHHHHHhCCCCCceEEEECCCHH
Confidence                           01136899999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEEec
Q psy3652         321 NLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTINH  381 (394)
Q Consensus       321 ~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~~~  381 (394)
                      ++++++  .++++|+|+||++. ...+.+||||+|.||+|+++|.+++++|++.|+|+++.
T Consensus       404 ~a~~~~--~~l~aG~v~vN~~~-~~~~~~PfGG~k~SG~G~~~g~~g~~~~~~~k~v~~~r  461 (462)
T 3etf_A          404 LAAEMA--ARLECGGVFINGYS-ASDARVAFGGVKKSGFGRELSHFGLHEFCNVQTVWKNR  461 (462)
T ss_dssp             HHHHHH--HHCCSSEEEESSCC-CCCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEECC
T ss_pred             HHHHHH--HhCCcceEEECCCC-CCCCCCCcCCcCCCCCCccchHHHHHHHhceeEEEEec
Confidence            999999  88999999999864 45678999999999999999999999999999998763

>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A

Probab=100.00  E-value=6.2e-72  Score=575.40  Aligned_cols=355  Identities=20%  Similarity=0.280  Sum_probs=313.8

Q ss_pred             hhhcCCCCCCCCCceeCCeeccCCCeeeeecCCC-CCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHH
Q psy3652          26 LKELGLSGSVNPGVYDGTSWKANGEIIPSINPST-GETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIG  104 (394)
Q Consensus        26 ~~~~~~~~~~~~~~~i~G~~~~~~~~~~v~nP~t-g~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a  104 (394)
                      +.++... ....++||||+|+.++..+.++||+| |+++++++.++.+|+++||++|++||+.|+.+|.++|.++|++++
T Consensus        54 ~~~~~~~-~~~~~~~I~G~~~~~~~~~~~~~P~~~~~~i~~~~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~a  132 (563)
T 4e3x_A           54 LKDLKGQ-TEAIPCVVGDEEVWTSDIQYQLSPFNHAHKVAKFCYADKALLNRAIDAALAARKEWDLKPMADRAQVFLKAA  132 (563)
T ss_dssp             HHTTTTC-CEECCEEETTEEECCSCEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHH
T ss_pred             HHHHHhC-CccCCeEECCEEeecCCceeeeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Confidence            4444433 34577999999997666788999998 799999999999999999999999999999999999999999999


Q ss_pred             HHHhhC-HHHHHHHHHHHcCCChHHhHHH-HHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCc
Q psy3652         105 DALRHK-LVPLGQLVSLEMGKILAEGIGE-VQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNF  182 (394)
Q Consensus       105 ~~l~~~-~~~l~~~~~~e~Gk~~~~a~~e-v~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~  182 (394)
                      ++|+++ +++|++++++|+|||..++..| +..+++.++|+++.++++.+.......++...+..+.|+|||++|+||||
T Consensus       133 ~~l~~~~~~el~~~~~~e~Gk~~~ea~~e~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~p~GVV~~I~PwNf  212 (563)
T 4e3x_A          133 DMLSGPRRAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPISVPPSTNHTVYRGLEGFVAAISPFNF  212 (563)
T ss_dssp             HHHHTTTHHHHHHHHHHHHCCCHHHHHHHTTHHHHHHHHHHHHHHHHHTTCCCCCCTTEEEEEECCBCSSEEEEECCSSC
T ss_pred             HHHHhccHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCcceEEEecCceEEEEECCchH
Confidence            999998 9999999999999999999876 99999999999999988776543322223445667888899999999999


Q ss_pred             hhHhHHHHHHHHh----------------------------------------------------------------hHH
Q psy3652         183 PVAVYGWNAAIAL----------------------------------------------------------------VGV  198 (394)
Q Consensus       183 P~~~~~~~~~~aL----------------------------------------------------------------~g~  198 (394)
                      |+.+..+++++||                                                                +|+
T Consensus       213 P~~~~~~~~apALaGNtVVlKPs~~tp~sa~~l~~ll~eAGlP~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTGSt~vG~  292 (563)
T 4e3x_A          213 TAIGGNLAGAPALMGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFK  292 (563)
T ss_dssp             HHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTTCTTEEEEEEESCHHHHH
T ss_pred             HHHHHHHHHHHhhcCCEEEEECCCCChHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEECCHHHHH
Confidence            9999999999997                                                                677


Q ss_pred             HHHh----hhh------hhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc-------------
Q psy3652         199 AVQS----RFG------KLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK-------------  255 (394)
Q Consensus       199 ~i~~----~~~------~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~-------------  255 (394)
                      .|++    ++|      |+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++             
T Consensus       293 ~i~~~aa~~lk~~~~~prv~lElGGk~p~IV~~dADld~Aa~~iv~~~f~~~GQ~C~A~~rv~V~~si~d~f~~~l~~~~  372 (563)
T 4e3x_A          293 HLWRQVAQNLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKGRLLEEH  372 (563)
T ss_dssp             HHHHHHHHTTTTCSSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHH
T ss_pred             HHHHHHHhhCCccccCCceeccCCCCCceeeCCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEecchHHHHHHHHHHHH
Confidence            7764    455      49999999999999999999999999999999999999999999999999             


Q ss_pred             -------c-C----------------------------------------CCCCceecCeEEEcCCCCCcccccccccce
Q psy3652         256 -------K-I----------------------------------------DRPGYFVEPTIVTGLPHNSRVVHRETFAPI  287 (394)
Q Consensus       256 -------~-~----------------------------------------~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPv  287 (394)
                             . .                                        +..|+|++|||+.+++++|++++||+||||
T Consensus       373 ~~l~vGdp~~d~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~v~~GG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPV  452 (563)
T 4e3x_A          373 SRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVGYYVEPCIIESKDPQEPIMKEEIFGPV  452 (563)
T ss_dssp             HTCCBSCTTTCTTCSBCCCSCHHHHHHHHHHHHHHHHCTTEEEEECCCEECSSSCEECCEEEEESCTTCGGGTSCCCSSE
T ss_pred             HhccCCCcccCcCCccCCCcCHHHHHHHHHHHHHHhhcCCCEEEeCCccCCCCCcEecCEEEecCCCCChhhcCCCcCeE
Confidence                   1 0                                        014799999999999999999999999999


Q ss_pred             EEEEeeCC--HHHHHHHH-hcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCC-CCCCCCCccCCCCCCCC-CC
Q psy3652         288 VYVFPFDS--LDEAITWN-NEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTN-GAEIGGAFGGEKYTGGG-RE  362 (394)
Q Consensus       288 l~v~~~~~--~~eAi~~~-n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~-~~~~~~pfGG~~~SG~G-~~  362 (394)
                      ++|++|+|  +||||+++ |+++|||+++|||+|.+++++++++.++++|+|+||+.++ ...+.+||||+|.||+| ++
T Consensus       453 l~V~~~~d~~~deAi~~ann~s~yGLta~V~t~d~~~~~~~~~~l~~~aG~v~IN~~~~~~~~~~~PFGG~k~SG~g~~~  532 (563)
T 4e3x_A          453 LTVYVYPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQEATRMLRNAAGNFYINDKSTGSVVGQQPFGGARASGTNDKP  532 (563)
T ss_dssp             EEEEEECGGGHHHHHHHHHHSSSEESEEEEECSCHHHHHHHHHHTTTTCSEEEESSCSCCCCTTTSCCCCEETTBCCCCT
T ss_pred             EEEEEECCCCHHHHHHHHHcCCCCCCEEEEEeCCHHHHHHHHHhhhcCeeEEEEcCCCCCCCcCCCCCCCccccCCCCcc
Confidence            99999997  79999999 7999999999999999999999932224599999998643 33567899999999998 89


Q ss_pred             chHHHHHhhhheeEEEEec
Q psy3652         363 SGSDSWKQYCRRSTVTINH  381 (394)
Q Consensus       363 ~g~~~l~~f~~~k~v~~~~  381 (394)
                      +|.+++++|++.|+|..+.
T Consensus       533 ~G~~~l~~~~~~k~v~~~~  551 (563)
T 4e3x_A          533 GGPHYILRWTSPQVIKETH  551 (563)
T ss_dssp             TSTTGGGGGBCCEEEEEEC
T ss_pred             CCHHHHHHhCceEEEEEeC
Confidence            9999999999999999885

>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A*

Probab=100.00  E-value=4.9e-72  Score=565.77  Aligned_cols=329  Identities=23%  Similarity=0.265  Sum_probs=285.8

Q ss_pred             CeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCChHHh
Q psy3652          50 EIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEG  129 (394)
Q Consensus        50 ~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a  129 (394)
                      ..+++.||.||+++++++.++.+|+++++++|++||+.|+.+|.++|.++|++++++|++++++|++++++|+|||..++
T Consensus         6 ~~~~~~~~~~~~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea   85 (457)
T 3lns_A            6 HHHHHSSGHIDDDDKHMNYLSPAKIDSLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKDVV   85 (457)
T ss_dssp             -----------------CCCCHHHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHH
T ss_pred             ccccccCCCCCCeeeecCCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHH
Confidence            45788999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             H-HHHHHHHHHHHHHHHhhhhccCc-ccCCC--CCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh----------
Q psy3652         130 I-GEVQEFIDICDYAVGLSRTYSGS-ILPSE--RPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL----------  195 (394)
Q Consensus       130 ~-~ev~~~~~~l~~~a~~~~~~~~~-~~~~~--~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL----------  195 (394)
                      + .|+..+++.++|+++.++++.+. ..+..  ..+...++.++|+|||++|+|||||+.+.++++++||          
T Consensus        86 ~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKp  165 (457)
T 3lns_A           86 DLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKP  165 (457)
T ss_dssp             HHHTHHHHHHHHHHHHHHHHHHTSCEEECCCGGGCSCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccccccccccCCCcceEEEeecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEEC
Confidence            8 69999999999999888776432 11111  1235577899999999999999999999999999999          


Q ss_pred             ----------------------------------------------------hHHHHHh----hhhhhccccCCCCeEEE
Q psy3652         196 ----------------------------------------------------VGVAVQS----RFGKLLLELGGNNAIIV  219 (394)
Q Consensus       196 ----------------------------------------------------~g~~i~~----~~~~~~lElgGk~p~iV  219 (394)
                                                                          +|+.|++    ++||+++|||||||+||
T Consensus       166 s~~tp~t~~~l~~l~~~alP~gvv~vv~g~~~~~~~L~~~~vd~V~fTGS~~~G~~i~~~aa~~l~pv~lElGGk~p~iV  245 (457)
T 3lns_A          166 SETTPETSAVIEKIIAEAFAPEYVAVIQGGRDENSHLLSLPFDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCPLIV  245 (457)
T ss_dssp             CTTCHHHHHHHHHHHHHHCCTTTEEECCCCHHHHHHHTTSCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCEEEEE
T ss_pred             CCCChHHHHHHHHHHHHhCCHhhEEEecCCHHHHHHHhcCCCCEEEEECCHHHHHHHHHHHhhccCceEEECCCCCCCeE
Confidence                                                                6777764    56899999999999999


Q ss_pred             ecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc--------------cC----------------------------
Q psy3652         220 NEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK--------------KI----------------------------  257 (394)
Q Consensus       220 ~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~--------------~~----------------------------  257 (394)
                      ++|||++.|++.+++++|.|+||.|++++|||||++              .+                            
T Consensus       246 ~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~p~~~~~gpli~~~~~~rv~~~i~~a~~  325 (457)
T 3lns_A          246 LPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTELPEINSTGKLVTERQVQRLVSLLEATQG  325 (457)
T ss_dssp             CTTCCHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHHHHCCSTTTTCCCSSHHHHHHHHHHHHHCCS
T ss_pred             CCCCCHHHHHHHHHHHHHHhCCCCccCCceEEEcHHHHHHHHHHHHHHHHhcCCCcccccCCCCHHHHHHHHHHHHhcCC
Confidence            999999999999999999999999999999999999              11                            


Q ss_pred             --------CCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhc-CCCCcEEEEEcCCHHHHHHhhcc
Q psy3652         258 --------DRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNE-VKQGLSSSIFTKDVTNLFKWLGP  328 (394)
Q Consensus       258 --------~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~-~~~gLsa~v~t~d~~~a~~~~~~  328 (394)
                              +..|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+ ++|||++||||+|.+++++++  
T Consensus       326 ~~~~gg~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~~gL~a~v~t~d~~~a~~~~--  403 (457)
T 3lns_A          326 QVLVGSQADVSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGII--  403 (457)
T ss_dssp             EEEECCCEEGGGTEECCEEEESCCTTSGGGSSCCCSSEEEEEEESCHHHHHHHHHHHSCSCSEEEEECSCHHHHHHHH--
T ss_pred             eEEeCCccCCCCceeCCEEEecCCCCChhhcCcccCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEEECCCHHHHHHHH--
Confidence                    025789999999999999999999999999999999999999999999 999999999999999999999  


Q ss_pred             cccceeEEEEcCCC-CCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEEe
Q psy3652         329 QGSDCGLINVNIPT-NGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTIN  380 (394)
Q Consensus       329 ~~~~~g~V~iN~~~-~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~~  380 (394)
                      .++++|+|+||++. ....+.+||||+|.||+|+++|.+++++|++.|+|++.
T Consensus       404 ~~l~aG~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~v~~~  456 (457)
T 3lns_A          404 NQIQSGDAQVNGVMLHAFSPYLPFGGIGASGMGEYHGHFSYLTFTHKKSVRIV  456 (457)
T ss_dssp             HTSCCSEEEESCCSGGGGCTTSCBCCCGGGEECCBSHHHHHHHTEEEEEEEEC
T ss_pred             HhCCcceEEEcCCCCCCCCCCCCcCCcCcCCCCCCchHHHHHHhhCeeEEEeC
Confidence            88999999999864 23467899999999999999999999999999999764

>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}

Probab=100.00  E-value=9e-72  Score=568.14  Aligned_cols=335  Identities=25%  Similarity=0.389  Sum_probs=305.6

Q ss_pred             CCceeCCeecc-CCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHH
Q psy3652          37 PGVYDGTSWKA-NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLG  115 (394)
Q Consensus        37 ~~~~i~G~~~~-~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~  115 (394)
                      .++||||+|+. ++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|++++++|++++++|+
T Consensus         6 ~~~~I~G~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela   85 (490)
T 3ju8_A            6 STHYIAGQWLAGQGETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFPAWARRPLEQRIELLERFAATLKSRADELA   85 (490)
T ss_dssp             CCEEETTEEECCCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHH
T ss_pred             cCceECCEEecCCCCeEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            46899999984 45789999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh
Q psy3652         116 QLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL  195 (394)
Q Consensus       116 ~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL  195 (394)
                      +++++|+|||..+++.|+..+++.++|+++..+.+.+...+.. .+...+++++|+|||++|+|||||+.+.++++++||
T Consensus        86 ~~~~~e~Gk~~~ea~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~AL  164 (490)
T 3ju8_A           86 RVIGEETGKPLWESATEVTSMVNKVAISVQAFRERTGEKSGPL-ADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPAL  164 (490)
T ss_dssp             HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHSCCEEEEE-TTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHH
T ss_pred             HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccC-CCCeeeEEECCCCEEEEECCCcchHHHHHHHHHHHH
Confidence            9999999999999999999999999999998887766544321 234456679999999999999999999999999999


Q ss_pred             ----------------------------------------------------------------hHHHHHh----hhhhh
Q psy3652         196 ----------------------------------------------------------------VGVAVQS----RFGKL  207 (394)
Q Consensus       196 ----------------------------------------------------------------~g~~i~~----~~~~~  207 (394)
                                                                                      +|+.|++    +++|+
T Consensus       165 aaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~~~~v  244 (490)
T 3ju8_A          165 LAGNCVVFKPSELTPKVAELTLKAWIQAGLPAGVLNLVQGGRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQPQKI  244 (490)
T ss_dssp             HHTCEEEEECCTTCHHHHHHHHHHHHHTTCCTTTEEECCCSHHHHHHHHTCTTCSEEEEESCHHHHHHHHHHTTTCTTSE
T ss_pred             HcCCeEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhccCCCc
Confidence                                                                            7788775    45787


Q ss_pred             -ccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc-------------------------------
Q psy3652         208 -LLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK-------------------------------  255 (394)
Q Consensus       208 -~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~-------------------------------  255 (394)
                       ++|||||||+||++|||++.|++.+++++|.|+||.|++++|+|||++                               
T Consensus       245 ~~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~G~~~~~~~~~~G  324 (490)
T 3ju8_A          245 LALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVGRFDEQPAPFMG  324 (490)
T ss_dssp             EEEECCCCEEEEECCCSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEESSHHHHHHHHHHHHHHHHCCBCCTTCSSCCSBC
T ss_pred             EEeecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCCEEEEECCccHHHHHHHHHHHHHhccCCCCCCCCcCccc
Confidence             799999999999999999999999999999999999999999999987                               


Q ss_pred             ------------------------------cCCCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhc
Q psy3652         256 ------------------------------KIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNE  305 (394)
Q Consensus       256 ------------------------------~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~  305 (394)
                                                    ..+..|+|++|||+. ++++|++++||+||||++|++|+|+||||+++|+
T Consensus       325 pli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl~-v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~  403 (490)
T 3ju8_A          325 AVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPIDGAALLTPGILD-VSAVAERPDEEFFGPLLQVIRYSDFAAAIREANA  403 (490)
T ss_dssp             CCSCHHHHHHHHHHHHHHHHTTCEEEECCCCCSTTSCCCCCEEEE-CTTCSSCCCCCCCSSEEEEEEESSHHHHHHHHHC
T ss_pred             cccCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCCEEccEEEE-eCCCCccccccccccEEEEEEeCCHHHHHHHHhc
Confidence                                          001258999999998 9999999999999999999999999999999999


Q ss_pred             CCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEEec
Q psy3652         306 VKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTINH  381 (394)
Q Consensus       306 ~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~~~  381 (394)
                      ++|||++||||+|.+++++++  .++++|+|+||+++....+.+||||+|.||++      ++++|++.|+|++..
T Consensus       404 ~~~gL~a~v~t~d~~~a~~~~--~~l~aG~v~vN~~~~~~~~~~PfGG~~~SG~~------~~~~~~~~k~v~~~~  471 (490)
T 3ju8_A          404 TQYGLAAGLLSDSRERFEQFL--VESRAGIVNWNKQLTGAASSAPFGGIGASGNH------RPSAYYAADYCAYPV  471 (490)
T ss_dssp             SSCCSEEEEECSCHHHHHHHH--HHCCSSEEEESSCSSCCCTTSEECCCGGGBSS------CCEETTHHHHHEEEE
T ss_pred             CCCCceEEEEcCCHHHHHHHH--HhcCcceEEECCCcCCCCCCCCcCCccccchh------HHHhhheeEEEEEec
Confidence            999999999999999999999  88999999999876555678999999999985      478999999988775

>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}

Probab=100.00  E-value=4.9e-71  Score=598.09  Aligned_cols=346  Identities=27%  Similarity=0.469  Sum_probs=317.5

Q ss_pred             CCCCceeCCeeccCCCeeeeecCCC-CCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHH
Q psy3652          35 VNPGVYDGTSWKANGEIIPSINPST-GETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVP  113 (394)
Q Consensus        35 ~~~~~~i~G~~~~~~~~~~v~nP~t-g~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~  113 (394)
                      ...++||||+|+.++.+++++||+| ++++++++.++.+|+++|+++|++||+.|+.+|+++|+++|++++++|++++++
T Consensus       530 ~~~~~~I~G~~~~~~~~~~v~nPa~~~~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eRa~iL~~~Adll~~~~~e  609 (1026)
T 4f9i_A          530 KTYPLFINGKEVRTNDLIPTVNPNKPSEVLGQICQAGTTEVGDAIAAAKAAFPAWRDTDPRTRAEYLLKAAQAARKRLFE  609 (1026)
T ss_dssp             EEECEEETTEEECCSCEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred             cccCceECCEEecCCCcEEEeCCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHH
Confidence            3567899999997788999999998 999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHH
Q psy3652         114 LGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAI  193 (394)
Q Consensus       114 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~  193 (394)
                      |++++++|+|||..++..|+..+++.++|+++.++++.+...+...++...++.++|+|||++|+|||||+.+.++++++
T Consensus       610 La~~~~~E~GK~~~ea~~Ev~~aid~lr~~a~~~~~~~~~~~~~~~~g~~~~~~~~PlGVV~~I~PwNfPl~i~~~~~a~  689 (1026)
T 4f9i_A          610 LSAWQVLEIGKQWDQAYADVTEAIDFLEYYAREMIRLGQPQRVGHAPGELNHYFYEPKGVAAVIAPWNFPLAISMGMASA  689 (1026)
T ss_dssp             HHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHTSCEEECCCTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHH
T ss_pred             HHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCccceeEeecCceEEEeCCCccHHHHHHHHHHH
Confidence            99999999999999999999999999999999988876654433234556678899999999999999999999999999


Q ss_pred             Hh-----------------------------------------------------------------hHHHHHhh-----
Q psy3652         194 AL-----------------------------------------------------------------VGVAVQSR-----  203 (394)
Q Consensus       194 aL-----------------------------------------------------------------~g~~i~~~-----  203 (394)
                      ||                                                                 +|+.|++.     
T Consensus       690 ALaaGNtVVlKPse~tplsa~~l~ell~eAGlP~gvvnvV~G~g~~vg~~L~~hp~v~~V~FTGSt~vg~~I~~~aa~~~  769 (1026)
T 4f9i_A          690 AIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERAAKVH  769 (1026)
T ss_dssp             HHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHTSCC
T ss_pred             HHHcCCEEEEEcCccchHHHHHHHHHHHHhCcCCCeEEEEecCcHHHHHHHHhCCCCCEEEeCCCHHHHHHHHHHhhccc
Confidence            99                                                                 67777642     


Q ss_pred             -----hhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc-----------------------
Q psy3652         204 -----FGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK-----------------------  255 (394)
Q Consensus       204 -----~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~-----------------------  255 (394)
                           ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++                       
T Consensus       770 ~~~~~lkpv~lElGGknp~IV~~dADld~Aa~~iv~saf~~aGQ~C~A~~rl~V~~~i~d~f~~~L~~~~~~l~vG~p~d  849 (1026)
T 4f9i_A          770 PGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKVGPSED  849 (1026)
T ss_dssp             TTCCSCCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCTTS
T ss_pred             ccccCccceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCCCCceEEecHHHHHHHHHHHHHHHHhcccCCccc
Confidence                 4689999999999999999999999999999999999999999999999999                       


Q ss_pred             ----------------------------------cCCC-CCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHH
Q psy3652         256 ----------------------------------KIDR-PGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAI  300 (394)
Q Consensus       256 ----------------------------------~~~~-~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi  300 (394)
                                                        ..+. .|+|+.|||+.+++++|++++||+||||++|++|+|+||||
T Consensus       850 ~~t~~Gpvi~~~~~~~v~~~i~~a~~~G~~v~gG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~d~deAI  929 (1026)
T 4f9i_A          850 PANYMGAVADDKAMKSIKEYAEIGKREGHVLYESPVPAGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQAI  929 (1026)
T ss_dssp             TTCSBCCCSSHHHHHHHHHHHHHHHHHSEEEEECCCCSSSSCCCCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHH
T ss_pred             ccCccccccCHHHHHHHHHHHHHHHhCCeEEecCCcCCCCCceecceeeecCCCCccccCceecCcEEEEEEeCCHHHHH
Confidence                                              0112 39999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCC-CCCCCCccCCCCCCCCC-CchHHHHHhhhheeEEE
Q psy3652         301 TWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNG-AEIGGAFGGEKYTGGGR-ESGSDSWKQYCRRSTVT  378 (394)
Q Consensus       301 ~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~-~~~~~pfGG~~~SG~G~-~~g~~~l~~f~~~k~v~  378 (394)
                      +++|+++|||+++|||+|.+.+++++  .++++|+|+||..+.+ ....+||||+|.||+|+ .+|++++++|++.|+|+
T Consensus       930 ~~aN~t~yGLt~~V~t~d~~~a~~~~--~~l~aG~v~IN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~~l~~f~~~k~v~ 1007 (1026)
T 4f9i_A          930 EWANSTQFALTGGIFSRSPEHLAKAR--REFRVGNLYINRNNTGALVERQPFGGARMSGVGTKAGGPDYLLHFMDPRVVT 1007 (1026)
T ss_dssp             HHHTCSSCCSEEEEECCCHHHHHHHH--HHSCCSEEEESSCSCCCCTTTSCBCCCGGGBSSCCBTSTTTGGGGEEEEEEE
T ss_pred             HHHHcCCCCCeEEEECCCHHHHHHHH--HhCCEeeEEEcCCCCCCCCCCCCCCCcCcCCCCCCcCCHHHHHHhceEEEEE
Confidence            99999999999999999999999999  8899999999986543 34568999999999995 68999999999999999


Q ss_pred             EecC
Q psy3652         379 INHG  382 (394)
Q Consensus       379 ~~~~  382 (394)
                      ++..
T Consensus      1008 ~~~~ 1011 (1026)
T 4f9i_A         1008 ENTM 1011 (1026)
T ss_dssp             EECC
T ss_pred             Eecc
Confidence            9864

>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A*

Probab=100.00  E-value=2.7e-71  Score=570.17  Aligned_cols=341  Identities=23%  Similarity=0.265  Sum_probs=304.4

Q ss_pred             CCceeCCeec-cCCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHH-HHHhhcCChhhHHHHHHHHHHHHhhCHHHH
Q psy3652          37 PGVYDGTSWK-ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAA-YAAWAALPAPRRGEIVRQIGDALRHKLVPL  114 (394)
Q Consensus        37 ~~~~i~G~~~-~~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A-~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l  114 (394)
                      .++||||+|+ .++.+++++||+||+++++++.++ +|+++|+++|++| |+.|+.+|.++|.++|++++++|++++++|
T Consensus         8 ~~~~i~G~~~~~~~~~~~v~nP~tg~~i~~~~~~~-~dv~~Av~aA~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~el   86 (534)
T 2y53_A            8 LKNHVAGQWIAGTGAGITLTDPVTGVALVRVSSEG-LDLARAFSFAREDGGAALRALTYAQRAARLADIVKLLQAKRGDY   86 (534)
T ss_dssp             CCEEETTEEECCSSSCEEEECTTTCCEEEEECCTT-CCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred             hhhEECCEEecCCCCeEEEECCCCCCEEEEEeCCH-HHHHHHHHHHHHHhhhhhhhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence            5689999998 344679999999999999999998 9999999999999 599999999999999999999999999999


Q ss_pred             HHHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccC-------cccCCCCCC-ceeEeeeccc-eeEEEEccCCchhH
Q psy3652         115 GQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSG-------SILPSERPG-HVLLENWNPL-GVVGIISAFNFPVA  185 (394)
Q Consensus       115 ~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~-------~~~~~~~~~-~~~~~~~~P~-GVV~~I~p~N~P~~  185 (394)
                      ++++++|+|||..+++.|+..+++.++|+++.++++.+       +..+...++ ...++.++|+ |||++|+|||||+.
T Consensus        87 a~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwN~P~~  166 (534)
T 2y53_A           87 YAIATANSGTTRNDSAVDIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSW  166 (534)
T ss_dssp             HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHTTCSCSEEEEEEEEECSTTSSEEEEEEEEECSSCEEEECCTTCTTH
T ss_pred             HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhccccccccCCccccCCCCCcccceEEEecCCCEEEEECCCchHHH
Confidence            99999999999999988999999999999998776543       211221122 2356789997 99999999999999


Q ss_pred             hHHHHHHHHh---------------------------------------------------------------hHHHHHh
Q psy3652         186 VYGWNAAIAL---------------------------------------------------------------VGVAVQS  202 (394)
Q Consensus       186 ~~~~~~~~aL---------------------------------------------------------------~g~~i~~  202 (394)
                      +.++++++||                                                               +|+.|++
T Consensus       167 ~~~~~~a~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~aG~lP~gvv~vv~g~~~~l~~~l~~vd~V~FTGS~~~G~~i~~  246 (534)
T 2y53_A          167 GLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICGSSAGLLDQIRSFDVVSFTGSADTAATLRA  246 (534)
T ss_dssp             HHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHTCSCTTSEEECCSCCTTSGGGCCTTCEEEEESCHHHHHHHHT
T ss_pred             HHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCeEEEEeCChHHHHhcccccCEEEEECCHHHHHHHHH
Confidence            9999999999                                                               7888874


Q ss_pred             ------hhhhhccccCCCCeEEEecCC-----CHHHHHHHHHHHhhCcCCCcccCCceEEEecc----------------
Q psy3652         203 ------RFGKLLLELGGNNAIIVNEDA-----DLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK----------------  255 (394)
Q Consensus       203 ------~~~~~~lElgGk~p~iV~~dA-----Dl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~----------------  255 (394)
                            ++||+++|||||||+||++||     |++.|++.+++++|.|+||.|++++|||||++                
T Consensus       247 ~aa~a~~~k~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~  326 (534)
T 2y53_A          247 HPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEALKAKLAKI  326 (534)
T ss_dssp             SHHHHTTCCEEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHTTC
T ss_pred             hhhhhcCCCcEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHHhCCCCcccCCCEEEEeccHHHHHHHHHHHHHHhc
Confidence                  368999999999999999999     99999999999999999999999999999999                


Q ss_pred             ------------------------------------c-C--C---------CCCceecCeEEEcCCCC--Cccccccccc
Q psy3652         256 ------------------------------------K-I--D---------RPGYFVEPTIVTGLPHN--SRVVHRETFA  285 (394)
Q Consensus       256 ------------------------------------~-~--~---------~~g~~~~Ptvl~~v~~~--~~i~~eE~FG  285 (394)
                                                          . .  .         ..|+|++|||+.+++++  |++++||+||
T Consensus       327 ~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~ga~~~~GG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~~i~~eEiFG  406 (534)
T 2y53_A          327 TVGNPRNDAVRMGSLVSREQYENVLAGIAALREEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHDVEVFG  406 (534)
T ss_dssp             CBBCTTSTTCSBCCCSCHHHHHHHHHHHHHHHTSSEEEEECTTSCCBSCCTTTSCCCCCEEEECSCGGGCSSTTTCCCSS
T ss_pred             cCCCCCcCCCCccCCCCHHHHHHHHHHHHHHHcCCEEEECCcccccccccCCCCceecCEEEEecCccccCHHHhCCCcC
Confidence                                                0 0  0         24899999999999987  6999999999


Q ss_pred             ceEEEEeeC---CH-----HHHHHHHhcCCCCcEEEEEcCCHHHHHHhhccccc--ceeEEEEcCCCC--------CCCC
Q psy3652         286 PIVYVFPFD---SL-----DEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGS--DCGLINVNIPTN--------GAEI  347 (394)
Q Consensus       286 Pvl~v~~~~---~~-----~eAi~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~--~~g~V~iN~~~~--------~~~~  347 (394)
                      ||++|++|+   |+     ||||+++|+++|||++||||+|.+++++++  .++  ++|+|+||+++.        ...+
T Consensus       407 PVl~v~~~~~~~~~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~--~~l~~~aG~V~vN~~~~~~~~~~~~~~~~  484 (534)
T 2y53_A          407 PVASVAPYRVTTDTNALPEAHAVALARRGQGSLVASIYSNDDAHLGRLA--LELADSHGRVHAISPSVQHSQTGHGNVMP  484 (534)
T ss_dssp             SEEEEEEECCCCC---CTTHHHHHHHHTTSSEEEEEEECSCHHHHHHHH--HHHTTTEEEEEEECGGGTTTCCCSSCCCT
T ss_pred             CEEEEEEECCCCCcccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHH--HHHHhhCCEEEEcCCcccccccccCCCCC
Confidence            999999999   99     999999999999999999999999999999  788  899999997532        1346


Q ss_pred             CCCccCCCCCCCCCC-chHHHHHhhhheeEEEEe
Q psy3652         348 GGAFGGEKYTGGGRE-SGSDSWKQYCRRSTVTIN  380 (394)
Q Consensus       348 ~~pfGG~~~SG~G~~-~g~~~l~~f~~~k~v~~~  380 (394)
                      .+||||+|.||+|++ +|.+++++|++.|++...
T Consensus       485 ~~pfGG~k~SG~Gr~~~g~~~l~~~~~~k~v~~~  518 (534)
T 2y53_A          485 MSLHGGPGRAGGGEELGGLRALAFYHRRSAIQAA  518 (534)
T ss_dssp             TSEECCSGGGCSCCEESGGGGGGGGEEEEEEEEE
T ss_pred             CCCCCCcccCCCCCCcchHHHHHHHhhhheeecC
Confidence            789999999999999 699999999999998764

>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti}

Probab=100.00  E-value=8.6e-71  Score=565.68  Aligned_cols=359  Identities=19%  Similarity=0.190  Sum_probs=305.9

Q ss_pred             ccCCcchhhhhcCCCCCCCCCceeCCeeccCCCeeeeecCCCCCeEE-EEeCCCHHHHHHHHHHHHHHHHHhhcCChhhH
Q psy3652          18 DSVSKYPFLKELGLSGSVNPGVYDGTSWKANGEIIPSINPSTGETIA-SVQQGNVQDYHRCIESSRAAYAAWAALPAPRR   96 (394)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~~~~~~i~G~~~~~~~~~~v~nP~tg~~i~-~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R   96 (394)
                      .-+.+...|+.... |....++||||+|+.+..   ++||+||++++ +++.++.+|+++|+++|++||+.|+.+|.++|
T Consensus        12 ~~~~~~~~~~~~~~-~~~~~~~~I~G~~~~~~~---v~nP~tg~~i~~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R   87 (528)
T 3v4c_A           12 DLGTENLYFQSMMI-FTPKGKHLVAGEWLDGAG---TFASAPAHGPAHDFAVGTVELVNRACEAAEEAFWTYGYSSRKER   87 (528)
T ss_dssp             -----------CCS-CCCCCCEEETTEEECCSS---EEECCCSSSCCCEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHH
T ss_pred             ccCcccHHHHHhhh-cccccCceECCEEecCCC---ccCCCCCCEeeeEeCCCCHHHHHHHHHHHHHHHHHHhhCCHHHH
Confidence            34455666776553 467788999999985443   99999999998 99999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhCHHHHHHHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhh--ccCccc----CCC--CCCceeEeee
Q psy3652          97 GEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRT--YSGSIL----PSE--RPGHVLLENW  168 (394)
Q Consensus        97 ~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~--~~~~~~----~~~--~~~~~~~~~~  168 (394)
                      .++|++++++|++++++|++++++|+|||..+++.|+..+++.++|+++.+++  +.+...    +..  .++...++.+
T Consensus        88 ~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (528)
T 3v4c_A           88 AAFLRAIADEIEARAEAITEIGSQETGLPEARLNGERGRTTGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEIRLVQ  167 (528)
T ss_dssp             HHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCEEECCBTTCSSSCBCCEEEEE
T ss_pred             HHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccccCCCCCcceeEe
Confidence            99999999999999999999999999999999999999999999999998876  223221    110  1223457789


Q ss_pred             ccceeEEEEccCCchhHhHH--HHHHHHh---------------------------------------------------
Q psy3652         169 NPLGVVGIISAFNFPVAVYG--WNAAIAL---------------------------------------------------  195 (394)
Q Consensus       169 ~P~GVV~~I~p~N~P~~~~~--~~~~~aL---------------------------------------------------  195 (394)
                      +|+|||++|+|||||+.+.+  +++++||                                                   
T Consensus       168 ~P~GVv~~I~PwN~P~~~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~g~  247 (528)
T 3v4c_A          168 RPVGPVAVFGASNFPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGH  247 (528)
T ss_dssp             EECSCEEEECCSSSTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCHHHHH
T ss_pred             eCCcEEEEECCCcchHHHhhhhhhhHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeCCCHHHHH
Confidence            99999999999999999754  8999998                                                   


Q ss_pred             ------------------hHHHHHh----hh--hhhccccCCCCeEEEecCC---CHHHHHHHHHHHhhCcCCCcccCCc
Q psy3652         196 ------------------VGVAVQS----RF--GKLLLELGGNNAIIVNEDA---DLNLAQQCLVFACCGTAGQRCTTTR  248 (394)
Q Consensus       196 ------------------~g~~i~~----~~--~~~~lElgGk~p~iV~~dA---Dl~~aa~~i~~~~~~~~GQ~C~a~~  248 (394)
                                        +|+.|++    ++  +|+++|||||||+||++||   |++.|++.+++++|.|+||.|++++
T Consensus       248 ~L~~~p~v~~V~fTGS~~~G~~i~~~aa~~~~~~pv~lElGGk~p~iV~~dAd~~dl~~Aa~~i~~~~~~n~GQ~C~a~~  327 (528)
T 3v4c_A          248 ALVQHPHIKAVGFTGSLAGGRALFDLCAARPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPG  327 (528)
T ss_dssp             HHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHGGGGCCTTCCC
T ss_pred             HHHhCCCCCEEEEECChHHHHHHHHHHhhccCCCceEEecCCCCeEEECCCCChhhHHHHHHHHHHHHHhcCCCccccCc
Confidence                              6777765    34  7999999999999999999   8999999999999999999999999


Q ss_pred             eEEEecc---------------------------------------c-C--------CCCCceecCeEEEcCCCC---Cc
Q psy3652         249 RLFLHKK---------------------------------------K-I--------DRPGYFVEPTIVTGLPHN---SR  277 (394)
Q Consensus       249 rv~V~~~---------------------------------------~-~--------~~~g~~~~Ptvl~~v~~~---~~  277 (394)
                      |||||++                                       . -        ...|+|+.|||+.+++++   |+
T Consensus       328 rvlV~~~~i~d~f~~~l~~~~~~~~~~~~~gp~~~~~~~~~v~~~~~~~Ga~v~~gG~~~g~~~~PTvl~~~~~~~~~~~  407 (528)
T 3v4c_A          328 IAVVIEGADADRFTTAAVEALAKVAPQTMLTDGIAKAYRDGQARFATRNAVKPLLATESSGRDASPNLFETTGAQFLADH  407 (528)
T ss_dssp             EEEEESSHHHHHHHHHHHHHHHTCCCEECSCHHHHHHHHHHHHHHHTCTTCEEEECCCCCTTEECCEEEEEEHHHHHHCG
T ss_pred             EEEEecccHHHHHHHHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHhCCCEEEeCCCcCCceeccEEEEecCcccccCh
Confidence            9999984                                       0 0        125899999999988887   89


Q ss_pred             ccccccccceEEEEeeCCHHHHHHHHhcCCCCcEEEEEcC--CHHHHHHhhcccccc--eeEEEEcCCCCC--CCCCCCc
Q psy3652         278 VVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTK--DVTNLFKWLGPQGSD--CGLINVNIPTNG--AEIGGAF  351 (394)
Q Consensus       278 i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~~gLsa~v~t~--d~~~a~~~~~~~~~~--~g~V~iN~~~~~--~~~~~pf  351 (394)
                      +++||+||||++|++|+|+||||+++|+++|||+++|||+  |.+++++++  .+++  +|+|+||+++..  ..+.+||
T Consensus       408 i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~GL~a~v~t~d~d~~~a~~~a--~~l~~~aG~V~vN~~~~~~~~~~~~pf  485 (528)
T 3v4c_A          408 ALGEEVFGPLGLVVRVGSPAEMEELARGFQGQLTATIHMDAGDLETARRLR--PVLERKAGRVLVNGFPTGVEVVDSMVH  485 (528)
T ss_dssp             GGGCCCSSSEEEEEEESSHHHHHHHHHHCCCEEEEEEECCGGGHHHHHHHH--HHHHHHEEEEEESSCTTCCCCSTTCCC
T ss_pred             hhcccccCCeEEEEecCCHHHHHHHHhcCCCCceEEEEcCCCCHHHHHHHH--HHHhhcCcEEEEcCCCCCCccCCCCCC
Confidence            9999999999999999999999999999999999999999  899999999  7787  999999986432  3577999


Q ss_pred             cC-CCCCCCCCCc--hHHHHHhhhheeEEEEecCC
Q psy3652         352 GG-EKYTGGGRES--GSDSWKQYCRRSTVTINHGK  383 (394)
Q Consensus       352 GG-~~~SG~G~~~--g~~~l~~f~~~k~v~~~~~~  383 (394)
                      || +|.||+|+++  |++++++|++.|++ .++|.
T Consensus       486 GG~~~~Sg~gr~~~~G~~gl~~~~~~k~~-q~~p~  519 (528)
T 3v4c_A          486 GGPYPASTNFGATSVGTMSIRRFLRPVAY-QNMPE  519 (528)
T ss_dssp             CCTTTTBSCTTCCSSSGGGGGGGEEEEEE-ESCCG
T ss_pred             CCCCCCCCCCCCCCCcHHHHHHhchhHHh-hcCCc
Confidence            99 9999999986  99999999999864 34443

>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*

Probab=100.00  E-value=1.1e-69  Score=549.43  Aligned_cols=313  Identities=20%  Similarity=0.303  Sum_probs=279.4

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCChHHhH-HHHHHHHHHHHHHHHh
Q psy3652          68 QGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGI-GEVQEFIDICDYAVGL  146 (394)
Q Consensus        68 ~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~  146 (394)
                      ..+.+|+++|+++|++||+.|+.+|.++|.++|++++++|++++++|++++++|+|||..+++ .|+..+++.++++++.
T Consensus        14 ~~s~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~   93 (469)
T 3sza_A           14 GSHMSKISEAVKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMIQK   93 (469)
T ss_dssp             ----CHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            356779999999999999999999999999999999999999999999999999999999997 5999999999988876


Q ss_pred             hhhccCcccCC---CCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh----------------------------
Q psy3652         147 SRTYSGSILPS---ERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL----------------------------  195 (394)
Q Consensus       147 ~~~~~~~~~~~---~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL----------------------------  195 (394)
                      ...+.......   ...+...++.++|+|||++|+|||||+.+.++++++||                            
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~a  173 (469)
T 3sza_A           94 LPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQY  173 (469)
T ss_dssp             HHHHHSCEECCCCGGGTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             HHhhhcccccCccccCCCccceeeccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHh
Confidence            65543211110   11234577899999999999999999999999999999                            


Q ss_pred             ----------------------------------hHHHHHh----hhhhhccccCCCCeEEEecCCCHHHHHHHHHHHhh
Q psy3652         196 ----------------------------------VGVAVQS----RFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACC  237 (394)
Q Consensus       196 ----------------------------------~g~~i~~----~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~  237 (394)
                                                        +|+.|++    ++||+++|||||||+||++|||++.|++.+++++|
T Consensus       174 lP~gvv~vv~g~~~~~~~ll~~~vd~I~FTGS~~vG~~i~~~aa~~lkpv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~  253 (469)
T 3sza_A          174 LDKDLYPVINGGVPETTELLKERFDHILYTGSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACRRIAWGKF  253 (469)
T ss_dssp             SCTTTSCBCCCSHHHHHHHTTSCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCCEEEECTTSCHHHHHHHHHHHHH
T ss_pred             CCcceEEEEECCHHHHHHHHhcCCCEEEEECCHHHHHHHHHHHhhccCceEEecCCCCceEECCCCCHHHHHHHHHHHHH
Confidence                                              7777765    56899999999999999999999999999999999


Q ss_pred             CcCCCcccCCceEEEecc----------------------------------------------------cCCCCCceec
Q psy3652         238 GTAGQRCTTTRRLFLHKK----------------------------------------------------KIDRPGYFVE  265 (394)
Q Consensus       238 ~~~GQ~C~a~~rv~V~~~----------------------------------------------------~~~~~g~~~~  265 (394)
                      .|+||.|++++|||||++                                                    ..+..|+|++
T Consensus       254 ~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~g~~~~~~~~~gpli~~~~~~rv~~~i~ga~v~~GG~~~~~g~~~~  333 (469)
T 3sza_A          254 MNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEFYGEDAKKSRDYGRIISARHFQRVMGLIEGQKVAYGGTGDAATRYIA  333 (469)
T ss_dssp             GGGGCCTTSCCEEEECGGGHHHHHHHHHHHHHHHHCSCGGGCTTCCCCSCHHHHHHHHHHHTTSEEEECCCEETTTTEEC
T ss_pred             hcCCCCCCCCcEEEEehhHHHHHHHHHHHHHHHhcCCCCcccCcccccCCHHHHHHHHHHHcCCEEEeCCccCCCCceeC
Confidence            999999999999999999                                                    0012589999


Q ss_pred             CeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCC-C
Q psy3652         266 PTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTN-G  344 (394)
Q Consensus       266 Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~-~  344 (394)
                      |||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++  .++++|+|+||+... .
T Consensus       334 PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~--~~l~~G~V~vN~~~~~~  411 (469)
T 3sza_A          334 PTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMI--AETSSGGVAANDVIVHI  411 (469)
T ss_dssp             CEEEESCCTTSGGGTSCCCSSEEEEEECSSHHHHHHHHHHSCCCSEEEEECSCHHHHHHHH--HHCCCSEEEESCSSGGG
T ss_pred             CeeecCCCCcchhhhccccCCeEEEEecCCHHHHHHHHHcCCCCceEEEECCCHHHHHHHH--HhCCcceEEEeCCCCCC
Confidence            9999999999999999999999999999999999999999999999999999999999999  889999999998642 3


Q ss_pred             CCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEEecC
Q psy3652         345 AEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTINHG  382 (394)
Q Consensus       345 ~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~~~~  382 (394)
                      ..+.+||||+|.||+|+++|.+++++|++.|+|+++..
T Consensus       412 ~~~~~PfGG~k~SG~Gr~~G~~g~~~ft~~K~v~~~~~  449 (469)
T 3sza_A          412 TLHSLPFGGVGNSGMGSYHGKKSFETFSHRRSCLVRPL  449 (469)
T ss_dssp             SCTTSCBCCCGGGEECCBSTHHHHHHTEEEEEEEECCS
T ss_pred             CCCCCCcCCccccccCccchHHHHHHhhCeeEEEECCc
Confidence            46789999999999999999999999999999998753

>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A*

Probab=100.00  E-value=2.2e-67  Score=538.26  Aligned_cols=329  Identities=18%  Similarity=0.214  Sum_probs=290.5

Q ss_pred             CCCeeeeecCCCCCeE-EEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCCh
Q psy3652          48 NGEIIPSINPSTGETI-ASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKIL  126 (394)
Q Consensus        48 ~~~~~~v~nP~tg~~i-~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~  126 (394)
                      ++.+++++||+||+++ ++++.++.+|+++|+++|++||+.|+.+|.++|.++|++++++|++++++|++++++|+|||.
T Consensus         5 ~~~~~~~~nP~tg~~i~~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~   84 (510)
T 1ez0_A            5 TDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETALPE   84 (510)
T ss_dssp             CCCEEEEECTTTSSEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCH
T ss_pred             CCCeEEeECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCH
Confidence            5678999999999999 799999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhHHHHHHHHHHHHHHHHhhhh--ccCccc----CCCCC-C-ceeEeeeccceeEEEEccCCchhHhH--HHHHHHHh-
Q psy3652         127 AEGIGEVQEFIDICDYAVGLSRT--YSGSIL----PSERP-G-HVLLENWNPLGVVGIISAFNFPVAVY--GWNAAIAL-  195 (394)
Q Consensus       127 ~~a~~ev~~~~~~l~~~a~~~~~--~~~~~~----~~~~~-~-~~~~~~~~P~GVV~~I~p~N~P~~~~--~~~~~~aL-  195 (394)
                      .+++.|+..+++.++|+++.+++  +.+...    +...+ + ...++.++|+|||++|+|||||+.+.  ++++++|| 
T Consensus        85 ~~a~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~~~ALa  164 (510)
T 1ez0_A           85 VRLTGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALA  164 (510)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCccccccccccccccCCCCCCCceEEEecCcEEEEECCccchhhhhhhHHHHHHHHH
Confidence            99999999999999999998875  433322    11111 1 13567899999999999999999984  49999998 


Q ss_pred             --------------------------------------------------------------------hHHHHHh----h
Q psy3652         196 --------------------------------------------------------------------VGVAVQS----R  203 (394)
Q Consensus       196 --------------------------------------------------------------------~g~~i~~----~  203 (394)
                                                                                          +|+.|++    +
T Consensus       165 aGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~  244 (510)
T 1ez0_A          165 AGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHER  244 (510)
T ss_dssp             HTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHS
T ss_pred             cCCEEEEECCCCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHcCCCCCEEEEeCcHHHHHHHHHHhhcc
Confidence                                                                                7787765    3


Q ss_pred             h--hhhccccCCCCeEEEecCCCHH--HHHHHHHHHhhCcCCCcccCCceEEEecc-c----------------------
Q psy3652         204 F--GKLLLELGGNNAIIVNEDADLN--LAQQCLVFACCGTAGQRCTTTRRLFLHKK-K----------------------  256 (394)
Q Consensus       204 ~--~~~~lElgGk~p~iV~~dADl~--~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~-~----------------------  256 (394)
                      +  ||+++|||||||+||++|||++  .|++.+++++|.|+||.|++++|||||++ .                      
T Consensus       245 l~~~pv~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~gp~~~  324 (510)
T 1ez0_A          245 PEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQSPSTLLT  324 (510)
T ss_dssp             SSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHCCCBCCSS
T ss_pred             CCCccEEEECCCCCeEEEeCCCCccHHHHHHHHHHHHHcCCCCCcCCCCEEEEeCCccHHHHHHHHHHHHHhcCCCCCCC
Confidence            3  8999999999999999999999  99999999999999999999999999996 0                      


Q ss_pred             --------------C-C---------CCCceecCeEEEcCCCC---CcccccccccceEEEEeeCCHHHHHHHHhcCCCC
Q psy3652         257 --------------I-D---------RPGYFVEPTIVTGLPHN---SRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQG  309 (394)
Q Consensus       257 --------------~-~---------~~g~~~~Ptvl~~v~~~---~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~~g  309 (394)
                                    . .         .+|+|+.|||+.+++++   |++++||+||||++|++|+|+||||+++|+++||
T Consensus       325 ~~~~~~~~~~v~~~~~~~Ga~~~~gg~~g~~~~Ptvl~~~~~~~~~~~i~~eEiFGPVl~v~~~~~~deai~~aN~~~~g  404 (510)
T 1ez0_A          325 PGIRDSYQSQVVSRGSDDGIDVTFSQAESPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGS  404 (510)
T ss_dssp             HHHHHHHHHHHHHHHTSTTEEEEECCCCTTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEEESSHHHHHHHHHTCCCE
T ss_pred             HHHHHHHHHHHHHHHhcCCCEEEecCCCCCEecCEEEEecCCccccCHHHcCCccCCeEEEEEeCCHHHHHHHHhcCCCC
Confidence                          0 0         02799999999888777   9999999999999999999999999999999999


Q ss_pred             cEEEEEcCCH--HHHHHhhccccc--ceeEEEEcCCCCC--CCCCCCccC-CCCCCCCCC--chHHHHHhhhheeEEE
Q psy3652         310 LSSSIFTKDV--TNLFKWLGPQGS--DCGLINVNIPTNG--AEIGGAFGG-EKYTGGGRE--SGSDSWKQYCRRSTVT  378 (394)
Q Consensus       310 Lsa~v~t~d~--~~a~~~~~~~~~--~~g~V~iN~~~~~--~~~~~pfGG-~~~SG~G~~--~g~~~l~~f~~~k~v~  378 (394)
                      |++||||+|.  +++++++  .++  ++|+|+||+++..  ..+.+|||| +|.||+|+.  +|.+++++|++.|++.
T Consensus       405 Laa~v~t~d~~~~~a~~~~--~~l~~~aG~V~iN~~~~~~~~~~~~pfGG~~~~sG~g~~~~~G~~gl~~~~~~k~~~  480 (510)
T 1ez0_A          405 LTATIHATEEDYPQVSQLI--PRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTSVGAEAIHRWLRPVAYQ  480 (510)
T ss_dssp             EEEEEECCGGGHHHHHHHH--HHHHTTEEEEEESSCSSCCCCSSSCCCCCSTTSCSCSSCCSSSGGGGGGGEEEEEEE
T ss_pred             eEEEEEccCcCHHHHHHHH--HHHhhcccEEEECCCCccCccCCCCCCCCCCCCcCCCCCCCccHHHHHHhheEEEEc
Confidence            9999999987  7899999  777  7999999986432  346799999 799999854  7999999999888664

>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens}

Probab=100.00  E-value=2.1e-64  Score=509.59  Aligned_cols=328  Identities=16%  Similarity=0.109  Sum_probs=262.3

Q ss_pred             eeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHc-------CCC
Q psy3652          53 PSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEM-------GKI  125 (394)
Q Consensus        53 ~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~-------Gk~  125 (394)
                      -++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|++++++|++++++|++++++|+       |||
T Consensus        10 ~~~~P~tg~~~~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~g~~~~~~Gk~   89 (463)
T 2h5g_A           10 GVDLGTENLYFQSMVKPAGPTVEQQGEMARSGGRMLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRLAAP   89 (463)
T ss_dssp             -------------------CCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTSCHH
T ss_pred             CCcCCCCCCEEEEecCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccCCCc
Confidence            4679999999999999999999999999999999999999999999999999999999999999999999       799


Q ss_pred             hH----HhHHHHHHHHHHHHHHHHhhhhccCcccCCC--CCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh----
Q psy3652         126 LA----EGIGEVQEFIDICDYAVGLSRTYSGSILPSE--RPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL----  195 (394)
Q Consensus       126 ~~----~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL----  195 (394)
                      ..    ++..|+..+++.++|+++.++++.+...+..  .++...++.++|+|||++|+||| |+... +++++||    
T Consensus        90 ~~~rl~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n-P~n~p-~~~a~ALaaGN  167 (463)
T 2h5g_A           90 LLKRLSLSTSKLNSLAIGLRQIAASSQDSVGRVLRRTRIAKNLELEQVTVPIGVLLVIFESR-PDCLP-QVAALAIASGN  167 (463)
T ss_dssp             HHHTTCCCHHHHHHHHHHHHHHHHHCTTSTTCEEEEEEEETTEEEEEEEEECCEEEEEESSC-TTHHH-HHHHHHHHHTC
T ss_pred             hhhhhhhhHHHHHHHHHHHHHHHHhhHhhcCcccccccCCCCceeEEEEEcCceEEEEecCC-cHHHH-HHHHHHHHcCC
Confidence            97    4678999999999999988877766553321  12445678899999999999776 66655 6777777    


Q ss_pred             ---------------------------------------------------------------hHHHHHhh--hhhhccc
Q psy3652         196 ---------------------------------------------------------------VGVAVQSR--FGKLLLE  210 (394)
Q Consensus       196 ---------------------------------------------------------------~g~~i~~~--~~~~~lE  210 (394)
                                                                                     +|+.|++.  +||+++|
T Consensus       168 ~VVlKps~~tp~t~~~l~~l~~~al~~~GP~gvv~vv~g~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aal~pv~lE  247 (463)
T 2h5g_A          168 GLLLKGGKEAAHSNRILHLLTQEALSIHGVKEAVQLVNTREEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAKGIPVMGH  247 (463)
T ss_dssp             EEEEECCGGGHHHHHHHHHHHHHHHHTTTCGGGEEECCTTCCC-------CCCSEEEEESCHHHHHHHHHHCSSSCBCSC
T ss_pred             EEEEECCCCcHHHHHHHHHHHHHHHHhcCCCCeEEEEcCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhcCCCCEEEe
Confidence                                                                           77888764  4899999


Q ss_pred             cCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecccCC------------CCCceec-----CeEEEcCC
Q psy3652         211 LGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKKKID------------RPGYFVE-----PTIVTGLP  273 (394)
Q Consensus       211 lgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~~~~------------~~g~~~~-----Ptvl~~v~  273 (394)
                      ||||||+||++|||++.|++.+++++|.| ||.|++++|||||++..+            ..|..+.     +.....++
T Consensus       248 lGGk~p~iV~~dADl~~Aa~~i~~~~f~n-GQ~C~a~~rvlV~~~i~d~p~~~~~i~~~~~~Ga~v~~G~~~~~~g~~~~  326 (463)
T 2h5g_A          248 SEGICHMYVDSEASVDKVTRLVRDSKCEY-PAACNALETLLIHRDLLRTPLFDQIIDMLRVEQVKIHAGPKFASYLTFSP  326 (463)
T ss_dssp             SCCCEEEEECTTCCTTTHHHHHHHHHHSC-TTSTTSEEEEEEEGGGTTSHHHHHHHHHHHHTTCEEEECHHHHC------
T ss_pred             cCCcceEEEcCCCCHHHHHHHHHHHhccC-CCccccCcEEEEeccccchHHHHHHHHHHHhCCCEEEeCCcccccCccCC
Confidence            99999999999999999999999999999 999999999999998433            1121110     00111246


Q ss_pred             CCCcccccccccceEEEEeeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccC
Q psy3652         274 HNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGG  353 (394)
Q Consensus       274 ~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG  353 (394)
                      ++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++  .++++|+|+||+++. ..+.+||||
T Consensus       327 ~~~~i~~eE~FgPvl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~--~~l~aG~V~iN~~~~-~~~~~PfGG  403 (463)
T 2h5g_A          327 SEVKSLRTEYGDLELCIEVVDNVQDAIDHIHKYGSSHTDVIVTEDENTAEFFL--QHVDSACVFWNASTR-FSDGYRFGL  403 (463)
T ss_dssp             ---CCSSCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHH--HHCCSSEEEESSCGG-GCSTTTTTS
T ss_pred             CCchHHhccccCceEEEEEeCCHHHHHHHHHcCCCCceEEEEeCCHHHHHHHH--HhCCeeEEEEeCCcc-CCCCCCCCC
Confidence            89999999999999999999999999999999999999999999999999999  889999999998653 456799999


Q ss_pred             CCCCCCC--CC--chHHHHHhhhheeEEEEecCCccc
Q psy3652         354 EKYTGGG--RE--SGSDSWKQYCRRSTVTINHGKEIT  386 (394)
Q Consensus       354 ~~~SG~G--~~--~g~~~l~~f~~~k~v~~~~~~~~~  386 (394)
                      +|.||+|  ++  +|.+++++|++.|+|+++.....|
T Consensus       404 ~k~SG~G~~r~~~~G~~gl~~ft~~K~v~~~~~~~r~  440 (463)
T 2h5g_A          404 GAEVGISTSRIHARGPVGLEGLLTTKWLLRGKDHVVS  440 (463)
T ss_dssp             SCCSCEECCSSSCCEECCGGGGEEEEEEEECSSCCGG
T ss_pred             CccCcCCCCcccCCCHHHHHHhceeEEEEECCCcccC
Confidence            9999999  76  899999999999999998654333

>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}

Probab=100.00  E-value=4.8e-63  Score=534.64  Aligned_cols=312  Identities=26%  Similarity=0.396  Sum_probs=284.0

Q ss_pred             EeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCChHHhHHHHHHHHHHHHHHHH
Q psy3652          66 VQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVG  145 (394)
Q Consensus        66 v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~  145 (394)
                      ++.++.+|+++|+++|++||+.|+.+|.++|.++|++++++|++++++|++++++|+|||..++..|+..+++.++|+++
T Consensus       544 v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eR~~iL~~~ad~l~~~~~eLa~~~~~E~GK~~~ea~~Ev~~ai~~lr~~a~  623 (1001)
T 3haz_A          544 IADATPDQAHAAVAAARAGFAGWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDALSELREAADFCRYYAA  623 (1001)
T ss_dssp             CCCCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHH
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhccCcccC-CCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh-----------------------------
Q psy3652         146 LSRTYSGSILP-SERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL-----------------------------  195 (394)
Q Consensus       146 ~~~~~~~~~~~-~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL-----------------------------  195 (394)
                      .++++.+.... ....+...++.++|+|||++|+|||||+.+.++++++||                             
T Consensus       624 ~a~~~~g~~~~~~~~~g~~~~~~~~P~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell~eAG  703 (1001)
T 3haz_A          624 QGRKLFGSETAMPGPTGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLHEAG  703 (1001)
T ss_dssp             HHHHHHSSCEECCCCTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             HHHhhcCccccccCCCCCceEEEEeCCcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHHHHhC
Confidence            98886654311 122356677899999999999999999999999999999                             


Q ss_pred             -----------------------------------hHHHHHhh-------hhhhccccCCCCeEEEecCCCHHHHHHHHH
Q psy3652         196 -----------------------------------VGVAVQSR-------FGKLLLELGGNNAIIVNEDADLNLAQQCLV  233 (394)
Q Consensus       196 -----------------------------------~g~~i~~~-------~~~~~lElgGk~p~iV~~dADl~~aa~~i~  233 (394)
                                                         +|+.|++.       ++|+++|+|||||+||++|||++.|++.++
T Consensus       704 lP~gvv~vV~G~g~~g~~L~~~p~Vd~V~FTGSt~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~dADld~Aa~~iv  783 (1001)
T 3haz_A          704 IPKSALYLVTGDGRIGAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVADDVV  783 (1001)
T ss_dssp             CCTTTEEECCCCHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTTSCHHHHHHHHH
T ss_pred             cCcCcEEEEecCchHHHHHHhCCCcCEEEecCCHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcCCCCHHHHHHHHH
Confidence                                               77777652       578999999999999999999999999999


Q ss_pred             HHhhCcCCCcccCCceEEEecc--------------------------------------------------------cC
Q psy3652         234 FACCGTAGQRCTTTRRLFLHKK--------------------------------------------------------KI  257 (394)
Q Consensus       234 ~~~~~~~GQ~C~a~~rv~V~~~--------------------------------------------------------~~  257 (394)
                      +++|.|+||.|++++|||||++                                                        ..
T Consensus       784 ~s~f~naGQ~C~A~~rllV~e~i~d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~g~v~gg~~  863 (1001)
T 3haz_A          784 TSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEARLHFAGP  863 (1001)
T ss_dssp             HHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHSEEEEECC
T ss_pred             HHHHhCCCCCCCCCceeeccHHHHHHHHHHHHHHHHhcCCCCcccccCccCCCCCHHHHHHHHHHHHHHHhcCeEecccc
Confidence            9999999999999999999999                                                        01


Q ss_pred             CCCCceecCeEEEcCCCCCcccccccccceEEEEeeCC--HHHHHHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeE
Q psy3652         258 DRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDS--LDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGL  335 (394)
Q Consensus       258 ~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~--~~eAi~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~  335 (394)
                      +..|+|+.|||+.+  +++.+++||+||||++|++|++  +||||+++|+++|||+++|||+|.+++++++  .++++|+
T Consensus       864 ~~~G~fv~PTvl~~--~~~~~~~eEiFGPVL~V~~~~~~~ldeAI~~aN~t~yGLta~V~T~d~~~a~~~a--~~l~aG~  939 (1001)
T 3haz_A          864 APEGCFVAPHIFEL--TEAGQLTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAII--DRVQVGN  939 (1001)
T ss_dssp             CCSSSCCCCEEEEC--SSGGGCCSCCCSSEEEEEEECGGGHHHHHHHHHHTCCCSEEEEECSCHHHHHHHH--HHCCCSE
T ss_pred             CCCCcEEeeEEecC--CCHHHHhccccCcEEEEEEeCCCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHH--HhCCeee
Confidence            12489999999974  6889999999999999999996  7999999999999999999999999999999  8899999


Q ss_pred             EEEcCCCCCC-CCCCCccCCCCCCCC-CCchHHHHHhhhheeEEEEec
Q psy3652         336 INVNIPTNGA-EIGGAFGGEKYTGGG-RESGSDSWKQYCRRSTVTINH  381 (394)
Q Consensus       336 V~iN~~~~~~-~~~~pfGG~~~SG~G-~~~g~~~l~~f~~~k~v~~~~  381 (394)
                      |+||.++.+. ...+||||+|.||+| +.+|++++++|++.|+|+++.
T Consensus       940 V~VN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~gl~~ft~~K~v~~~~  987 (1001)
T 3haz_A          940 IYVNRNMIGAVVGVQPFGGNGLSGTGPKAGGPHYLARFATEQTVTINT  987 (1001)
T ss_dssp             EEESSCSCCCCTTTSCBCCCGGGBCCCCBTSTTSGGGGEEEEEEEEEC
T ss_pred             EEEeCCCcCCCCCCCCCCCcccCcCCCCCCCHHHHHHhceeeEEEECC
Confidence            9999875433 346799999999999 568899999999999999985

>1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1

Probab=100.00  E-value=4.1e-59  Score=467.31  Aligned_cols=301  Identities=23%  Similarity=0.316  Sum_probs=261.4

Q ss_pred             CHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCCh----HHhH--------HHHHHHH
Q psy3652          70 NVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKIL----AEGI--------GEVQEFI  137 (394)
Q Consensus        70 ~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~----~~a~--------~ev~~~~  137 (394)
                      ..+++++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+||+.    .++.        .|+..++
T Consensus        12 ~~~~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~~~~   91 (427)
T 1o20_A           12 HMDELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEMI   91 (427)
T ss_dssp             --CHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHHHHH
Confidence            346899999999999999999999999999999999999999999999999999986    4553        6899999


Q ss_pred             HHHHHHHHhhhhccCcccCCC--CCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh--------------------
Q psy3652         138 DICDYAVGLSRTYSGSILPSE--RPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL--------------------  195 (394)
Q Consensus       138 ~~l~~~a~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL--------------------  195 (394)
                      +.+++++++.++ .+...+..  ..+...++.++|+|||++|+||| | .+.++++++||                    
T Consensus        92 ~~l~~~a~~~~~-~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~p-~-~~~~~~~~~ALaaGNtVVlKps~~tp~t~~~  168 (427)
T 1o20_A           92 KACETVIGLKDP-VGEVIDSWVREDGLRIARVRVPIGPIGIIYESR-P-NVTVETTILALKSGNTILLRGGSDALNSNKA  168 (427)
T ss_dssp             HHHHHHHHSCCC-TTCEEEEEECTTSCEEEEEEEECCCEEEECCSC-T-HHHHHHHHHHHHTTCCEEEECCGGGHHHHHH
T ss_pred             HHHHHHHhcccc-cCccccccccCCCceeEEEeecceeEEEEecCC-h-HHHHHHHHHHHHcCCEEEEECCHhHHHHHHH
Confidence            999999988765 34332211  12344678899999999999986 3 68889999998                    


Q ss_pred             --------------------------------------------------hHHHHHh-hhhhhccccCCCCeEEEecCCC
Q psy3652         196 --------------------------------------------------VGVAVQS-RFGKLLLELGGNNAIIVNEDAD  224 (394)
Q Consensus       196 --------------------------------------------------~g~~i~~-~~~~~~lElgGk~p~iV~~dAD  224 (394)
                                                                        +|+.|++ .+||+++|||||||+||++|||
T Consensus       169 l~~l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a~~~v~lELGGk~p~iV~~dAD  248 (427)
T 1o20_A          169 IVSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNATVPVLETGVGNCHIFVDESAD  248 (427)
T ss_dssp             HHHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHCSSCBCCCCCCCEEEEECTTSC
T ss_pred             HHHHHHHHHHHcCCCcccEEEecCCChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhcCCCEEEecCCCceEEEeCCCC
Confidence                                                              7777775 4689999999999999999999


Q ss_pred             HHHHHHHHHHHhhCcCCCcccCCceEEEecc--------------cCC-----C---CCceecCeEEEcCCCCCcccccc
Q psy3652         225 LNLAQQCLVFACCGTAGQRCTTTRRLFLHKK--------------KID-----R---PGYFVEPTIVTGLPHNSRVVHRE  282 (394)
Q Consensus       225 l~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~--------------~~~-----~---~g~~~~Ptvl~~v~~~~~i~~eE  282 (394)
                      ++.|++.+++++|.|+| .|++++|||||++              .+.     .   .| |+ |||   ++++|++++||
T Consensus       249 l~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~~~gg~~~~~-~~-Ptl---~~~~~~i~~eE  322 (427)
T 1o20_A          249 LKKAVPVIINAKTQRPG-TCNAAEKLLVHEKIAKEFLPVIVEELRKHGVEVRGCEKTRE-IV-PDV---VPATEDDWPTE  322 (427)
T ss_dssp             HHHHHHHHHHHHHSCTT-STTSEEEEEEEHHHHHHHHHHHHHHHHHTTCEEEECHHHHH-HS-TTS---EECCGGGTTCC
T ss_pred             HHHHHHHHHHHhccCCC-CCCCccEEEEehhhHHHHHHHHHHHHHHcCCeeecChhhhh-hC-Ccc---cCCCcchhhcc
Confidence            99999999999999999 9999999999999              011     0   13 44 896   24578999999


Q ss_pred             cccceEEEEeeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCC--
Q psy3652         283 TFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGG--  360 (394)
Q Consensus       283 ~FGPvl~v~~~~~~~eAi~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G--  360 (394)
                      +||||++|++|+|+||||+++|+++|||++||||+|.+++++++  .++++|+|+||++.. ..+..||||.|.||+|  
T Consensus       323 iFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~--~~l~~G~V~iN~~~~-~~~~~pfGg~~~SG~g~~  399 (427)
T 1o20_A          323 YLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFV--SEIDAAAVYVNASTR-FTDGGQFGFGAEIGISTQ  399 (427)
T ss_dssp             CCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHH--HHCCSSEEEESSCGG-GCSTTTTTCSCCSCEECS
T ss_pred             cccceEEEEEECCHHHHHHHHHhCCCCCeEEEEeCCHHHHHHHH--HhCCccEEEECCCCc-cCCCCCCCCcccccccCC
Confidence            99999999999999999999999999999999999999999999  889999999998643 4567899999999997  


Q ss_pred             --CCchHHHHHhhhheeEEEEecC
Q psy3652         361 --RESGSDSWKQYCRRSTVTINHG  382 (394)
Q Consensus       361 --~~~g~~~l~~f~~~k~v~~~~~  382 (394)
                        +++|++++++|++.|+|++..+
T Consensus       400 ~~~~~g~~gl~~~~~~k~v~~~~~  423 (427)
T 1o20_A          400 RFHARGPVGLRELTTYKFVVLGEY  423 (427)
T ss_dssp             SSSCCEECCTGGGEEEEEEEECSS
T ss_pred             cccCCChHHHHHHhceEEEEECCC
Confidence              4679999999999999998753

>1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1

Probab=100.00  E-value=6.1e-59  Score=470.38  Aligned_cols=301  Identities=17%  Similarity=0.171  Sum_probs=233.2

Q ss_pred             HHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCCh----HHhH-HHHHH-HHHHHHHHHHh
Q psy3652          73 DYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKIL----AEGI-GEVQE-FIDICDYAVGL  146 (394)
Q Consensus        73 ~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~----~~a~-~ev~~-~~~~l~~~a~~  146 (394)
                      .+++|+++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||.    .++. .|+.. +++.++++++.
T Consensus        15 ~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~a~~   94 (468)
T 1vlu_A           15 SSQQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVMLQG   94 (468)
T ss_dssp             HHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHHHHH
Confidence            478999999999999999999999999999999999999999999999999998    8885 79988 88999999988


Q ss_pred             hhhcc------CcccCCC-C-CCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh-----------------------
Q psy3652         147 SRTYS------GSILPSE-R-PGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL-----------------------  195 (394)
Q Consensus       147 ~~~~~------~~~~~~~-~-~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL-----------------------  195 (394)
                      ++.+.      +...+.. . .+...++.++|+|||++|+||| | .+.++++++||                       
T Consensus        95 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~  172 (468)
T 1vlu_A           95 IKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGKESVNTFREMAK  172 (468)
T ss_dssp             HHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHHHH
T ss_pred             HHHHhhcCCCCCeecccccCCCCceeEEEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHHH
Confidence            77764      3332211 1 2345678999999999999999 9 88889999988                       


Q ss_pred             -------------------------------------------------hHHHHHh-hhhhhccccCCCCeEEEecCCCH
Q psy3652         196 -------------------------------------------------VGVAVQS-RFGKLLLELGGNNAIIVNEDADL  225 (394)
Q Consensus       196 -------------------------------------------------~g~~i~~-~~~~~~lElgGk~p~iV~~dADl  225 (394)
                                                                       +|+.|++ .+||+++|||||||+||++|||+
T Consensus       173 l~~~aL~e~~~~aGlP~gvv~vv~~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a~kpv~lElGGk~p~iV~~dADl  252 (468)
T 1vlu_A          173 IVNDTIAQFQSETGVPVGSVQLIETRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTTKIPVLGHADGICSIYLDEDADL  252 (468)
T ss_dssp             HHHHHHHHHHHHHCCCTTSEEECCCC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTCCSCBTTBCSCCEEEEECTTCCH
T ss_pred             HHHHHHHhhchhcCCCCCcEEEECCHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhcCCCEEeecCCccceEECCCCCH
Confidence                                                             6666664 46789999999999999999999


Q ss_pred             HHHHHHHHHHhhCcCCCcccCCceEEEecccCCC-------------C---C-----ce--------------ecCeEEE
Q psy3652         226 NLAQQCLVFACCGTAGQRCTTTRRLFLHKKKIDR-------------P---G-----YF--------------VEPTIVT  270 (394)
Q Consensus       226 ~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~~~~~-------------~---g-----~~--------------~~Ptvl~  270 (394)
                      +.|++.+++++|.|+| .|++++|||||++. ++             -   |     .+              +.||++ 
T Consensus       253 ~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i-d~f~~~l~~~~~~~~v~~~Gdp~~~~~~i~~a~~~~~gG~g~~Ptvl-  329 (468)
T 1vlu_A          253 IKAKRISLDAKTNYPA-GCNAMETLLINPKF-SKWWEVLENLTLEGGVTIHATKDLKTAYFDKLNELGKLTEAIQCKTV-  329 (468)
T ss_dssp             HHHHHHHHHTTCC-----CCCCEEEEECTTS-TTHHHHHHHHHHHHCCCBEECHHHHHHHHHHHHHHTCCCHHHHTTBC-
T ss_pred             HHHHHHHHHHhcCCCC-cCCcCcEEEEECCH-HHHHHHHHHHHHhcCCeecCCHHHhcccccccceeeccCCCCCCcee-
Confidence            9999999999999999 99999999999972 10             0   1     01              468887 


Q ss_pred             cCCCCCcccccccccceEEEEeeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCC
Q psy3652         271 GLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGA  350 (394)
Q Consensus       271 ~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~p  350 (394)
                       ++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++++++  .++++|+|+||+++. ..+..|
T Consensus       330 -v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~--~~l~aG~V~vN~~~~-~~~~~p  405 (468)
T 1vlu_A          330 -DADEEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKANAEKFM--KGVDSSGVYWNASTR-FADGFR  405 (468)
T ss_dssp             --------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECSCHHHHHHHH--HHCCCSEEEESSCGG-GCC---
T ss_pred             -eCCCchhhhcCccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHHHHHHHH--HhCCeeEEEEcCCCC-CCCCCC
Confidence             7889999999999999999999999999999999999999999999999999999  889999999998653 456789


Q ss_pred             cc-----CCCCCCCCCCchHHHHHhhhheeEEEEecCC
Q psy3652         351 FG-----GEKYTGGGRESGSDSWKQYCRRSTVTINHGK  383 (394)
Q Consensus       351 fG-----G~~~SG~G~~~g~~~l~~f~~~k~v~~~~~~  383 (394)
                      ||     |+|.||+|++ |.+++++|++.|+|+++.+.
T Consensus       406 fG~Gg~~G~~~SG~g~~-G~~gl~~f~~~K~v~~~~~~  442 (468)
T 1vlu_A          406 YGFGAEVGISTSKIHAR-GPVGLDGLVSYQYQIRGDGQ  442 (468)
T ss_dssp             --------------------CCSGGGEEEEEEEECSSC
T ss_pred             CCCCCCcceecCCCCCC-cchHHHHhcceEEEEECCCC
Confidence            99     9999999999 99999999999999988644

>4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis}

Probab=100.00  E-value=4.4e-58  Score=461.98  Aligned_cols=302  Identities=19%  Similarity=0.185  Sum_probs=246.8

Q ss_pred             HHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCChH----HhH--------HHHHHHHH
Q psy3652          71 VQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILA----EGI--------GEVQEFID  138 (394)
Q Consensus        71 ~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~----~a~--------~ev~~~~~  138 (394)
                      .+|+++|+++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+||+..    ++.        .|+..+++
T Consensus        25 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~gk~~~~g~~ea~~~~~~~~~~~v~~~~~  104 (444)
T 4ghk_A           25 DQYMTDVGRRARRASRSIARASTAAKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTMVE  104 (444)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCC------CCSHHHHHCCCTTHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhccchHHHHHHhhccHHHHHHHHH
Confidence            588999999999999999999999999999999999999999999999999999853    554        37899999


Q ss_pred             HHHHHHHhhhhccCcccCC--CCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh---------------------
Q psy3652         139 ICDYAVGLSRTYSGSILPS--ERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL---------------------  195 (394)
Q Consensus       139 ~l~~~a~~~~~~~~~~~~~--~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL---------------------  195 (394)
                      .+++++++.+.. +...+.  ...+...++.++|+|||++|+||| | .+.++++++||                     
T Consensus       105 ~l~~~a~~~~~~-g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l  181 (444)
T 4ghk_A          105 GLRQVATLPDPI-GEMSNLKYRPSGIQVGQMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESNTAL  181 (444)
T ss_dssp             HHHHHHHSCCCT-TCEEEEEECTTSCEEEEEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHHHHH
T ss_pred             HHHHHHhhcccc-CccCCcccCCCCccceEEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHHHHH
Confidence            999999887643 333322  113456778999999999999998 9 58889999998                     


Q ss_pred             -------------------------------------------------hHHHHHhh-hhhhccccCCCCeEEEecCCCH
Q psy3652         196 -------------------------------------------------VGVAVQSR-FGKLLLELGGNNAIIVNEDADL  225 (394)
Q Consensus       196 -------------------------------------------------~g~~i~~~-~~~~~lElgGk~p~iV~~dADl  225 (394)
                                                                       +|+.+++. +||+++|||||||+||++|||+
T Consensus       182 ~~l~~~~l~~aGlP~gvv~vv~g~~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a~~pv~lELGGk~p~IV~~dADl  261 (444)
T 4ghk_A          182 AKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEARVPMIKHLDGICHVYVDDRASV  261 (444)
T ss_dssp             HHHHHHHHHHTTCCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHCCSCBCCCCCCCCEEEECTTCCH
T ss_pred             HHHHHHHHHHcCCCcccEEEEeCCCHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhCCCCEEEEcCCcCeEEECCCCCH
Confidence                                                             67777754 6899999999999999999999


Q ss_pred             HHHHHHHHHHhhCcCCCcccCCceEEEecccC-----------C--CC---C-----ceecCe---EEEcCCCCCccccc
Q psy3652         226 NLAQQCLVFACCGTAGQRCTTTRRLFLHKKKI-----------D--RP---G-----YFVEPT---IVTGLPHNSRVVHR  281 (394)
Q Consensus       226 ~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~~~-----------~--~~---g-----~~~~Pt---vl~~v~~~~~i~~e  281 (394)
                      +.|++.+++++|.|+| .|++++|||||++..           .  ..   |     .++.-.   ++  ++++|++++|
T Consensus       262 ~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~g~p~~~~~i~~a~~G~~--~~~~~~~~~e  338 (444)
T 4ghk_A          262 TKALTVCDNAKTHRYG-TCNTMETLLVARGIAPAVLSPLGRLYREKGVELRVDADARAVLEAAGVGPL--VDATDEDWRT  338 (444)
T ss_dssp             HHHHHHCC----------CCCCCEEEEEGGGHHHHHHHHHHHHHHTTCEEEECHHHHHHHHHTTCCCC--EECCSGGGTC
T ss_pred             HHHHHHHHHHhcCCCc-ccCcCceEEEeHHHHHHHHHHHHHHHHHcCCeecCCHHHHHHHHhcccCcc--cCCCchhhhc
Confidence            9999999999999999 999999999999910           0  00   0     000000   11  3568999999


Q ss_pred             ccccceEEEEeeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCC-
Q psy3652         282 ETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGG-  360 (394)
Q Consensus       282 E~FGPvl~v~~~~~~~eAi~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G-  360 (394)
                      |+||||++|++|+|+||||+++|+++|||++||||+|.+++++++  .++++|+|+||+++. ..+..||||.+.||+| 
T Consensus       339 EiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~a--~~l~aG~V~vN~~~~-~~~~~pfGg~~~sG~g~  415 (444)
T 4ghk_A          339 EYLAPVLAIKIVDGIDAAIEHINEYGSHHTDAIVTEDHDRAMRFL--REVDSASVMVNASTR-FADGFEFGLGAEIGISN  415 (444)
T ss_dssp             C---CEEEEEEESSHHHHHHHHHHHSCSSEEEEECSBHHHHHHHH--HHCCSSEEEEEECGG-GCSTTTTTCSCCSEEEC
T ss_pred             cccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHHHHHHHH--HhCCcceEEEcCCCc-cCCCCCcCCcccccccC
Confidence            999999999999999999999999999999999999999999999  889999999998753 4567899999999998 


Q ss_pred             ---CCchHHHHHhhhheeEEEEec
Q psy3652         361 ---RESGSDSWKQYCRRSTVTINH  381 (394)
Q Consensus       361 ---~~~g~~~l~~f~~~k~v~~~~  381 (394)
                         +++|++++++|++.|+|++..
T Consensus       416 ~~~~~~G~~gl~~~t~~K~v~~~~  439 (444)
T 4ghk_A          416 DKLHARGPVGLEGLTSLKYVVLGH  439 (444)
T ss_dssp             CSSSCCEEECGGGGEEEEEEEEEE
T ss_pred             CcccCCChhHHHhhceEEEEEECC
Confidence               688999999999999998875

>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}

Probab=100.00  E-value=5.4e-57  Score=456.64  Aligned_cols=316  Identities=17%  Similarity=0.153  Sum_probs=260.0

Q ss_pred             EEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCChHHhHH-HHHHHHHHHHH
Q psy3652          64 ASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIG-EVQEFIDICDY  142 (394)
Q Consensus        64 ~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~  142 (394)
                      .+++.++.+|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++. +....++.+.+
T Consensus         4 ~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~~~~~~~~~~~~   83 (464)
T 3k9d_A            4 EDKDLRSIQEVRNLIESANKAQKELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASKHVYN   83 (464)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHH
T ss_pred             cccCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHH
Confidence            44566789999999999999999999999999999999999999999999999999999999988763 44444444443


Q ss_pred             HHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh---------------------------
Q psy3652         143 AVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL---------------------------  195 (394)
Q Consensus       143 ~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL---------------------------  195 (394)
                      ++...+ ..+.. . ...+...++.++|+|||++|+|||||+.+.++++++||                           
T Consensus        84 ~~~~~~-~~g~~-~-~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~ll~~  160 (464)
T 3k9d_A           84 YIKDMK-TIGML-K-EDNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISE  160 (464)
T ss_dssp             HHTTCC-CSEEE-E-EETTTTEEEEEEECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHH
T ss_pred             hhhccc-cccee-c-cCCCceeEEEEecceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHHHHHHH
Confidence            332221 11211 1 11345567889999999999999999999999999999                           


Q ss_pred             ------------------------------------------hHHHHHhhhhhhccccC-CCCeEEEecCCCHHHHHHHH
Q psy3652         196 ------------------------------------------VGVAVQSRFGKLLLELG-GNNAIIVNEDADLNLAQQCL  232 (394)
Q Consensus       196 ------------------------------------------~g~~i~~~~~~~~lElg-Gk~p~iV~~dADl~~aa~~i  232 (394)
                                                                +.+..++++||+ +|+| ||||+||++|||++.|++.+
T Consensus       161 ~~~~aG~P~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v~~~a~~~~kpv-lelG~G~~p~iV~~dADl~~Aa~~i  239 (464)
T 3k9d_A          161 AAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAMVKAAYSSGTPA-IGVGPGNGPAFIERSANIPRAVKHI  239 (464)
T ss_dssp             HHHHTTCCTTSEEECSSCCHHHHHHHHHCTTEEEEEECSCHHHHHHHTTSSSCE-EEBCCCCCEEEECTTSCHHHHHHHH
T ss_pred             HHHHhCCCCCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCChHHHHHHHhcCCcE-EeeCCCCCeEEECCCCCHHHHHHHH
Confidence                                                      223333456787 8998 99999999999999999999


Q ss_pred             HHHhhCcCCCcccCCceEEEecc-----------cC----------------CCCCceecC-------------------
Q psy3652         233 VFACCGTAGQRCTTTRRLFLHKK-----------KI----------------DRPGYFVEP-------------------  266 (394)
Q Consensus       233 ~~~~~~~~GQ~C~a~~rv~V~~~-----------~~----------------~~~g~~~~P-------------------  266 (394)
                      ++++|+|+||.|++++|||||++           ..                ...+..+.|                   
T Consensus       240 ~~~~~~n~Gq~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~i~~~~~~a~~  319 (464)
T 3k9d_A          240 LDSKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANLAGLTVP  319 (464)
T ss_dssp             HHHHTGGGGCSTTSCCEEEEEHHHHHHHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHHHHHHHTTCCCC
T ss_pred             HHHHhcCCCCCCCCCcEEEEeHHHHHHHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHHHHHHHhhhhhc
Confidence            99999999999999999999999           00                000111111                   


Q ss_pred             ---eEEE----cCCCCCcccccccccceEEEEeeCCHHHHH----HHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeE
Q psy3652         267 ---TIVT----GLPHNSRVVHRETFAPIVYVFPFDSLDEAI----TWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGL  335 (394)
Q Consensus       267 ---tvl~----~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi----~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~  335 (394)
                         .++.    ++++++++. +|+||||++|++|+|+||||    +++|+++|||+++|||+|.+++++++  .++++|+
T Consensus       320 ~ga~vl~gg~~~v~~~~~~~-~E~fgPVl~v~~~~~~~eAi~~ai~~~n~~~~gl~a~i~t~d~~~a~~~~--~~l~~G~  396 (464)
T 3k9d_A          320 ADARVLIAEETKVGAKIPYS-REKLAPILAFYTAETWQEACELSMDILYHEGAGHTLIIHSEDKEIIREFA--LKKPVSR  396 (464)
T ss_dssp             TTCCEEEEECCCCSTTCGGG-SCCCSSEEEEEEESSHHHHHHHHHHHHHHTTTEEEEEEECSCHHHHHHHH--HHSSEEE
T ss_pred             CCCEEEEcCCCCCCCCCccc-ccccCceEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEeCCHHHHHHHH--HhCCEeE
Confidence               2332    477888865 89999999999999999997    79999999999999999999999999  8899999


Q ss_pred             EEEcCCCC--------CCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEEecCCcccc
Q psy3652         336 INVNIPTN--------GAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTINHGKEITL  387 (394)
Q Consensus       336 V~iN~~~~--------~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~~~~~~~~~  387 (394)
                      |+||+++.        ...+.+|||| +.+|.|.++|..++++|++.|+|....+...++
T Consensus       397 v~vN~~~~~~~~g~~~~~~~~~~~G~-G~~G~g~~~~~~~~~~~~~~k~v~~~~~~~~~~  455 (464)
T 3k9d_A          397 LLVNTPGALGGIGATTNLVPALTLGC-GAVGGSSSSDNIGPENLFNIRRIATGVLELEDI  455 (464)
T ss_dssp             EEESSCHHHHHTTSSSSSCCCSCBBC-TGGGTCSCCSBCCGGGSEEEEEEEECCCCHHHH
T ss_pred             EEEECCccccccccCCCCCccccccC-cCCCCCcCCCCCCHHHheEEEEEEecCCchhhh
Confidence            99999753        2567899999 789999999999999999999999887665444

>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus}

Probab=100.00  E-value=4.1e-55  Score=441.56  Aligned_cols=302  Identities=18%  Similarity=0.204  Sum_probs=242.1

Q ss_pred             EeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCChHHhHH-HHHHHHHHH-HHH
Q psy3652          66 VQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIG-EVQEFIDIC-DYA  143 (394)
Q Consensus        66 v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~-ev~~~~~~l-~~~  143 (394)
                      ++.++.+|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++. |+..+.+.+ +++
T Consensus         1 ~~~a~~~~v~~av~~A~~A~~~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~e~Gk~~~e~~~~~~~~a~~~~~~~~   80 (452)
T 3my7_A            1 MPVTNMAELDAMIARVKKAQEEFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIYNKY   80 (452)
T ss_dssp             -CCSSHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHh
Confidence            467899999999999999999999999999999999999999999999999999999999999975 777667666 344


Q ss_pred             HHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh----------------------------
Q psy3652         144 VGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL----------------------------  195 (394)
Q Consensus       144 a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL----------------------------  195 (394)
                      +..  +..+.. +. .++...++.++|+|||++|+|||||+.+.++++++||                            
T Consensus        81 ~~~--~~~g~~-~~-~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~a  156 (452)
T 3my7_A           81 KDE--QTCGIL-EE-DDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDA  156 (452)
T ss_dssp             TTC--CCSEEC---------CEEEEEECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHH
T ss_pred             hhc--cccccc-cC-CCCCceEEEecCceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHHHHH
Confidence            321  122221 11 1234457789999999999999999999999999999                            


Q ss_pred             -----------------------------------------hHHHHHhhhhhhccccCCCCeEEEecCCCHHHHHHHHHH
Q psy3652         196 -----------------------------------------VGVAVQSRFGKLLLELGGNNAIIVNEDADLNLAQQCLVF  234 (394)
Q Consensus       196 -----------------------------------------~g~~i~~~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~  234 (394)
                                                               +++..+++.||+++|+|||||+||++|||++.|++.+++
T Consensus       157 ~~~aG~P~gvv~~v~g~~~~~~~~L~~~p~v~~V~fTGs~~~~~~a~~~~kp~~~e~gG~~p~iV~~dADl~~Aa~~iv~  236 (452)
T 3my7_A          157 AVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGMVKAAYSSGKPAIGVGAGNVPVVIDETADIKRAVASVLM  236 (452)
T ss_dssp             HHHTTCCTTSEEECSSCCHHHHHHHHHCTTCCEEEECSCHHHHHHHHTSSSCEEECC--CEEEEECTTSCHHHHHHHHHH
T ss_pred             HHHcCCCcCcEEEEcCCCHHHHHHHHhCCCccEEEEECcHHHHHHHHhcCCCEEecCCCCCeEEEeCCCCHHHHHHHHHH
Confidence                                                     334444567899999999999999999999999999999


Q ss_pred             HhhCcCCCcccCCceEEEecc--------------------------------------cCC--------CCCceecCeE
Q psy3652         235 ACCGTAGQRCTTTRRLFLHKK--------------------------------------KID--------RPGYFVEPTI  268 (394)
Q Consensus       235 ~~~~~~GQ~C~a~~rv~V~~~--------------------------------------~~~--------~~g~~~~Ptv  268 (394)
                      ++|+|+||.|++++|||||++                                      ...        ..|+|++||+
T Consensus       237 s~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~gpli~~~~~~~v~~~i~~~~~~~a~v~G~~~~~~~~~~G~~v~pt~  316 (452)
T 3my7_A          237 SKTFDNGVVCASEQAVIVVDEVYDEVKERFASHKAHVLSKTDADKVRKVLLIDGALNAKIVGQPATAIAEMAGVKVPADT  316 (452)
T ss_dssp             GGGGGGGCCTTCEEEEEEEGGGHHHHHHHHHTTTEEECCHHHHHHHHHHHEETTEECGGGTTCCHHHHHHHHTCCCCTTC
T ss_pred             HHhCCCCCccCCCcEEEEcHHHHHHHHHHHHHhCCCcCCHHHHHHHHHHHHhhcccCCeEecCccchhHHhCCceeCCCe
Confidence            999999999999999999999                                      000        1388999997


Q ss_pred             -------EEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcCC----CCcEEEEEcCCHHHHHH---hhccccccee
Q psy3652         269 -------VTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVK----QGLSSSIFTKDVTNLFK---WLGPQGSDCG  334 (394)
Q Consensus       269 -------l~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~----~gLsa~v~t~d~~~a~~---~~~~~~~~~g  334 (394)
                             +.++++++++++ |+||||++|++|+|+||||+++|++.    |||+++|||+|.+.+++   ++  .++++|
T Consensus       317 ~vl~~~~~~~v~~~~~~~~-E~FgPVl~v~~~~~~~eAi~~an~~~~~~g~Glta~i~t~d~~~a~~i~~~a--~~l~~G  393 (452)
T 3my7_A          317 KVLIGEGLGKVSYDDAFAH-EKLSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSGLYTNQDVNADRIRYFG--DKMKTA  393 (452)
T ss_dssp             CEEEEECSSSCCTTCGGGS-CCSSSEEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEESCTTTCHHHHHHHH--HHCCCS
T ss_pred             eEEeeccccCCCCcchhhc-CccCcEEEEEEeCCHHHHHHHHHhcccccCCCCEEEEEcCCHHHHHHHHHHH--HhCCEE
Confidence                   567889999886 89999999999999999999999985    99999999999888877   98  889999


Q ss_pred             EEEEcCCCCCCCCCCCccCCCCC-----------CCCCCc-----hHHHHHhhhheeEEEEec
Q psy3652         335 LINVNIPTNGAEIGGAFGGEKYT-----------GGGRES-----GSDSWKQYCRRSTVTINH  381 (394)
Q Consensus       335 ~V~iN~~~~~~~~~~pfGG~~~S-----------G~G~~~-----g~~~l~~f~~~k~v~~~~  381 (394)
                      +|+||+++       +|||.+..           |.|.++     +..+.++|.+.|+|..+.
T Consensus       394 ~V~VN~~~-------~~Gg~G~~~~f~~~~~~t~g~g~~Gg~~~~~nv~~~~l~n~~~v~~~~  449 (452)
T 3my7_A          394 RILINIPT-------THGGIGDLYNFNVAPSLTLGCGSWGGNSISENVGPKHLINKKTVAKRA  449 (452)
T ss_dssp             EEEESCCC-------C----------------------------CCCCCGGGGEEEEEEECCC
T ss_pred             EEEECCCC-------CCcccccccccCcCceEeeeccccCCCccCCCCChhHeeeeeEEEeec
Confidence            99999864       45544422           334443     345778888888887653

>4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus}

Probab=94.44  E-value=3.8  Score=39.73  Aligned_cols=79  Identities=16%  Similarity=0.117  Sum_probs=48.5

Q ss_pred             EEEeeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCC--------CCCCCCccCCCCCCCC
Q psy3652         289 YVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNG--------AEIGGAFGGEKYTGGG  360 (394)
Q Consensus       289 ~v~~~~~~~eAi~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~--------~~~~~pfGG~~~SG~G  360 (394)
                      .++.++|++|+++++|..--= -.-|.++|+.....    .--.+|.|++...+.-        .+.-+|-     +|..
T Consensus       313 ~ii~v~~~~ea~~~~N~~APE-HLel~~~~~~~~l~----~i~nAGaIFlG~~tp~~~GDY~aG~NHvLPT-----~G~A  382 (423)
T 4gic_A          313 GMILVDDLEQAAAVANRIAPE-HLELSVESPEVLVE----SIRNAGAIFMGRYTAEALGDYCAGPNHVLPT-----SGTA  382 (423)
T ss_dssp             EEEECSSHHHHHHHHHHHCCS-EEEEESSCHHHHGG----GCCCCSEEEEC----------------CCCC-----TTGG
T ss_pred             eEEEEeehHHHHHHHHhhChH-HhhhhhCCHHHHHh----hCcEeceeecCCCCchhhhhcCcCCCccCCC-----CCcc
Confidence            456789999999999986322 35677888765432    2246899999764321        1111333     4556


Q ss_pred             CCchHHHHHhhhheeEE
Q psy3652         361 RESGSDSWKQYCRRSTV  377 (394)
Q Consensus       361 ~~~g~~~l~~f~~~k~v  377 (394)
                      |+.+..+...|+++.++
T Consensus       383 r~~sgLsv~~F~K~~s~  399 (423)
T 4gic_A          383 RFSSPLGVYDFQKRSSL  399 (423)
T ss_dssp             GTCCCCCGGGGEEEEEE
T ss_pred             cccCCCCHHHeeeeeeE
Confidence            66666778888876554

>1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A

Probab=90.17  E-value=12  Score=36.46  Aligned_cols=83  Identities=14%  Similarity=0.068  Sum_probs=55.5

Q ss_pred             cceEEEEeeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCC--------CCCCCCCccCCCC
Q psy3652         285 APIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTN--------GAEIGGAFGGEKY  356 (394)
Q Consensus       285 GPvl~v~~~~~~~eAi~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~--------~~~~~~pfGG~~~  356 (394)
                      ..- .|+-++|++||++++|..--= -.-|.++|+.....-    --.+|.|++...+.        +.+.-+|-+|   
T Consensus       303 ~~~-~ii~v~~l~ea~~~~N~~APE-HLel~~~dp~~~l~~----I~nAGaIFlG~~tpe~~GDY~aG~NHvLPT~G---  373 (434)
T 1kae_A          303 NAS-RLIVTKDLAQCVEISNQYGPE-HLIIQTRNARELVDS----ITSAGSVFLGDWSPESAGDYASGTNHVLPTYG---  373 (434)
T ss_dssp             TTC-EEEECSSHHHHHHHHHHHCCS-EEEEESTTHHHHGGG----CCSCSEEEESTTCCHHHHHHTSSSCCCCCCTT---
T ss_pred             HcC-eEEEECCHHHHHHHHHHhhhH-hhhhhhcCHHHHHhh----cCcccchhcCCCCchhhcccccCCCcccCCCC---
Confidence            444 788899999999999986332 456788888654332    24789999986541        2233345544   


Q ss_pred             CCCCCCchHHHHHhhhheeEEE
Q psy3652         357 TGGGRESGSDSWKQYCRRSTVT  378 (394)
Q Consensus       357 SG~G~~~g~~~l~~f~~~k~v~  378 (394)
                        ..|+.+..+.+.|++..++.
T Consensus       374 --~AR~~sgLsV~~F~K~~s~~  393 (434)
T 1kae_A          374 --YTATCSSLGLADFQKRMTVQ  393 (434)
T ss_dssp             --GGGTCCCSCGGGGEEEEEEE
T ss_pred             --ceeccCCCcHHhccceeeEE
Confidence              55666666788888766553

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	394
d1ad3a_	446	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	9e-33
d1ad3a_	446	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	1e-13
d1bxsa_	494	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	1e-32
d1bxsa_	494	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	3e-24
d1bxsa_	494	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	8e-07
d1o04a_	494	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	4e-32
d1o04a_	494	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	1e-24
d1a4sa_	503	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	1e-31
d1a4sa_	503	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	5e-19
d1a4sa_	503	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	2e-07
d1uzba_	516	c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogen	1e-30
d1uzba_	516	c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogen	2e-15
d1euha_	474	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	2e-28
d1euha_	474	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	2e-22
d1wnda_	474	c.82.1.1 (A:) Putative betaine aldehyde dehydrogen	6e-25
d1wnda_	474	c.82.1.1 (A:) Putative betaine aldehyde dehydrogen	1e-22
d1wnda_	474	c.82.1.1 (A:) Putative betaine aldehyde dehydrogen	2e-04
d1ky8a_	499	c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3	3e-24
d1ky8a_	499	c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3	6e-18
d1ky8a_	499	c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3	1e-04
d1ez0a_	504	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	5e-23
d1ez0a_	504	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	1e-17
d1o20a_	414	c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {	2e-18
d1o20a_	414	c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {	1e-08
d1vlua_	436	c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {	6e-09

>d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 446

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  125 bits (315), Expect = 9e-33
 Identities = 43/239 (17%), Positives = 84/239 (35%), Gaps = 55/239 (23%)

Query: 195 LVGVAVQSRFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHK 254
           +V  A       + LELGG +   V++D DL++A + + +     +GQ C     +    
Sbjct: 193 IVMAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKFMNSGQTCVAPDYILCDP 252

Query: 255 ----------------------------------------------------KKIDRPGY 262
                                                                  D+   
Sbjct: 253 SIQNQIVEKLKKSLKDFYGEDAKQSRDYGRIINDRHFQRVKGLIDNQKVAHGGTWDQSSR 312

Query: 263 FVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNL 322
           ++ PTI+  +   S V+  E F P++ +    SL+EAI + N+ ++ L+  +F+ +   +
Sbjct: 313 YIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQFINQREKPLALYVFSNNEKVI 372

Query: 323 FKWLGPQGSDCGLINVNIPTNGAEIGGA-FGGEKYTGGGRESGSDSWKQYCRRSTVTIN 380
            K +    +  G +  N       +    FGG   +G G   G  S++ +  R +  + 
Sbjct: 373 KKMI--AETSSGGVTANDVIVHITVPTLPFGGVGNSGMGAYHGKKSFETFSHRRSCLVK 429

>d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 446

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 69.6 bits (169), Expect = 1e-13
 Identities = 20/121 (16%), Positives = 45/121 (37%), Gaps = 4/121 (3%)

Query: 78  IESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEG-IGEVQEF 136
           ++ +R A+ +        R + +  +   +   L  +   ++ ++GK        EV   
Sbjct: 6   VKRAREAFNSGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYEEVAHV 65

Query: 137 IDICDYAVGLSRTYSGSI---LPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAI 193
           ++  D  +     ++         +     L  +  PLGVV +I A+N+P  +       
Sbjct: 66  LEELDTTIKELPDWAEDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQPMVG 125

Query: 194 A 194
           A
Sbjct: 126 A 126

>d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} Length = 494

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Sheep (Ovis aries) [TaxId: 9940]

 Score =  125 bits (316), Expect = 1e-32
 Identities = 40/136 (29%), Positives = 60/136 (44%), Gaps = 3/136 (2%)

Query: 249 RLFLHKKKIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQ 308
           +L          GYF++PT+ + +  + R+   E F P+  +  F SLD+ I   N    
Sbjct: 360 KLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFY 419

Query: 309 GLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSW 368
           GLS+ IFT D+              G + VN   +       FGG K +G GRE G   +
Sbjct: 420 GLSAGIFTNDIDKAITVS--SALQSGTVWVNC-YSVVSAQCPFGGFKMSGNGRELGEYGF 476

Query: 369 KQYCRRSTVTINHGKE 384
            +Y    TVTI   ++
Sbjct: 477 HEYTEVKTVTIKISQK 492

>d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} Length = 494

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Sheep (Ovis aries) [TaxId: 9940]

 Score =  102 bits (254), Expect = 3e-24
 Identities = 37/159 (23%), Positives = 75/159 (47%), Gaps = 6/159 (3%)

Query: 47  ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAY---AAWAALPAPRRGEIVRQI 103
            +G+  P  NP+T E +  V++G+ +D  + ++++R A+   + W  + A  RG ++ ++
Sbjct: 26  VSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKL 85

Query: 104 GDALRHKLVPLGQLVSLEMGKILAEG-IGEVQEFIDICDYAVGLSRTYSGSILPSERPGH 162
            D +    + L  + ++  GK+ +   + ++   I    Y  G +    G  +P +    
Sbjct: 86  ADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMD-GNF 144

Query: 163 VLLENWNPLGVVGIISAFNFPVAVYGWNAAIALV-GVAV 200
                  P+GV G I  +NFP+ ++ W    AL  G  V
Sbjct: 145 FTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTV 183

>d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} Length = 494

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Sheep (Ovis aries) [TaxId: 9940]

 Score = 48.5 bits (115), Expect = 8e-07
 Identities = 21/70 (30%), Positives = 30/70 (42%)

Query: 191 AAIALVGVAVQSRFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRL 250
               +   A +S   ++ LELGG +  IV  DADL+ A +          GQ C    RL
Sbjct: 243 VGKLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRL 302

Query: 251 FLHKKKIDRP 260
           F+ +   D  
Sbjct: 303 FVEESIYDEF 312

>d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Length = 494

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

 Score =  124 bits (312), Expect = 4e-32
 Identities = 52/254 (20%), Positives = 84/254 (33%), Gaps = 62/254 (24%)

Query: 190 NAAIALVGVAVQSRFGKLLLELGGNNAIIVNEDADLNLAQQCLVF------ACCGTAGQR 243
                +   A  S   ++ LELGG +  I+  DAD++ A +   F        C  AG R
Sbjct: 242 EIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSR 301

Query: 244 CTTTR-----------------------------------------------------RL 250
                                                                     +L
Sbjct: 302 TFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKL 361

Query: 251 FLHKKKIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGL 310
                     GYF++PT+   +     +   E F P++ +  F +++E +   N    GL
Sbjct: 362 LCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGL 421

Query: 311 SSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQ 370
           ++++FTKD+         Q    G + VN           FGG K +G GRE G    + 
Sbjct: 422 AAAVFTKDLDKANYLS--QALQAGTVWVNCYDVFGA-QSPFGGYKMSGSGRELGEYGLQA 478

Query: 371 YCRRSTVTINHGKE 384
           Y    TVT+   ++
Sbjct: 479 YTEVKTVTVKVPQK 492

>d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Length = 494

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

 Score =  102 bits (256), Expect = 1e-24
 Identities = 40/154 (25%), Positives = 73/154 (47%), Gaps = 5/154 (3%)

Query: 47  ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAY---AAWAALPAPRRGEIVRQI 103
            + +  P++NPSTGE I  V +G+ +D  + ++++RAA+   + W  + A  RG ++ ++
Sbjct: 26  VSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRL 85

Query: 104 GDALRHKLVPLGQLVSLEMGKILA-EGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGH 162
            D +      L  L +L+ GK      + ++   +    Y  G +  Y G  +P +    
Sbjct: 86  ADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPID-GDF 144

Query: 163 VLLENWNPLGVVGIISAFNFPVAVYGWNAAIALV 196
                  P+GV G I  +NFP+ +  W    AL 
Sbjct: 145 FSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALA 178

>d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} Length = 503

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Baltic cod (Gadus callarias) [TaxId: 8053]

 Score =  123 bits (310), Expect = 1e-31
 Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 3/125 (2%)

Query: 258 DRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTK 317
            + GYF+ P ++     +   V  E F P++ V PFD+ +E +   N    GL+S +FT+
Sbjct: 376 LKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTR 435

Query: 318 DVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTV 377
           D++   +       + G   +N  +    +   FGG K +G GRE+G  +   Y +  TV
Sbjct: 436 DISRAHRVA--ANLEAGTCYINTYSISP-VEVPFGGYKMSGFGRENGQATVDYYSQLKTV 492

Query: 378 TINHG 382
            +  G
Sbjct: 493 IVEMG 497

>d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} Length = 503

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Baltic cod (Gadus callarias) [TaxId: 8053]

 Score = 86.3 bits (213), Expect = 5e-19
 Identities = 35/151 (23%), Positives = 63/151 (41%), Gaps = 1/151 (0%)

Query: 46  KANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGD 105
           K      P   P+TG  +  +     ++  + ++S++AAY  W+ +    R  ++ +   
Sbjct: 32  KDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIERSRVMLEAAR 91

Query: 106 ALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLL 165
            +R +   + +L  +  GK + E   ++       +Y  GL+ T SG        G    
Sbjct: 92  IIRERRDNIAKLEVINNGKTITEAEYDIDAAWQCIEYYAGLAPTLSGQH-IQLPGGAFAY 150

Query: 166 ENWNPLGVVGIISAFNFPVAVYGWNAAIALV 196
               PLGV   I A+N+P  +  W  A AL 
Sbjct: 151 TRREPLGVCAGILAWNYPFMIAAWKCAPALA 181

>d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} Length = 503

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Baltic cod (Gadus callarias) [TaxId: 8053]

 Score = 50.5 bits (120), Expect = 2e-07
 Identities = 17/59 (28%), Positives = 28/59 (47%)

Query: 195 LVGVAVQSRFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLH 253
            V          + LELGG + +++ +D +L  A +  + A   T GQ CT   R+F+ 
Sbjct: 248 KVMEMSAKTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQ 306

>d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 516

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: 1-pyrroline-5-carboxylate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score =  120 bits (302), Expect = 1e-30
 Identities = 34/134 (25%), Positives = 62/134 (46%), Gaps = 4/134 (2%)

Query: 249 RLFLHKKKIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQ 308
           +L L  K+++  GYF+ PT+ T +P  +R+   E F P++ V       EA+   N+   
Sbjct: 384 QLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPY 443

Query: 309 GLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGA-FGGEKYTGGGRESGS-D 366
           GL+  ++++   +L      +    G +  N    GA +G   FGG K +G   ++G+ D
Sbjct: 444 GLTGGVYSRKREHLEWAR--REFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALD 501

Query: 367 SWKQYCRRSTVTIN 380
             + +     V   
Sbjct: 502 YLRLFLEMKAVAER 515

>d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 516

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: 1-pyrroline-5-carboxylate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score = 75.3 bits (184), Expect = 2e-15
 Identities = 24/107 (22%), Positives = 44/107 (41%), Gaps = 1/107 (0%)

Query: 45  WKANGEIIPSINPS-TGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQI 103
           W    E + S+NPS   E + +  +    +    +E++  A+  W   P   R  ++ + 
Sbjct: 46  WVDTKERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDRSRLLLKA 105

Query: 104 GDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTY 150
              +R +   L   +  E+GK   E   +V E ID  +Y    +  Y
Sbjct: 106 AALMRRRKRELEATLVYEVGKNWVEASADVAEAIDFIEYYARAALRY 152

>d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} Length = 474

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Streptococcus mutans [TaxId: 1309]

 Score =  113 bits (284), Expect = 2e-28
 Identities = 46/229 (20%), Positives = 75/229 (32%), Gaps = 57/229 (24%)

Query: 207 LLLELGGNNAIIVNEDADL-------------NLAQQCLVFACCGTAGQRCTTTRRLFLH 253
           ++LELGG ++ IV EDADL                Q+C                      
Sbjct: 246 IMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIRE 305

Query: 254 KKK------------------------------------------IDRPGYFVEPTIVTG 271
           K                                            I R G  + P +   
Sbjct: 306 KVLALTIGNPEDDADITPLIDTKSADYVEGLINDANDKGATALTEIKREGNLICPILFDK 365

Query: 272 LPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGS 331
           +  + R+   E F P++ +    S++EAI  +N+ + GL +SIFT D    F     +  
Sbjct: 366 VTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIA--EQL 423

Query: 332 DCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTIN 380
           + G +++N  T        F G K +G G +    S +      +V  +
Sbjct: 424 EVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVFD 472

>d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} Length = 474

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Streptococcus mutans [TaxId: 1309]

 Score = 96.1 bits (238), Expect = 2e-22
 Identities = 38/155 (24%), Positives = 64/155 (41%), Gaps = 5/155 (3%)

Query: 45  WKANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIG 104
           WK +   I    P++G  + SV   + ++      S++ A  AW AL    R   + ++ 
Sbjct: 12  WKLSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVA 71

Query: 105 DALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSR-----TYSGSILPSER 159
           D L      +G ++S E+ K     + EV    +I +YA             G    +  
Sbjct: 72  DILMRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAAS 131

Query: 160 PGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIA 194
              + +    P+G+V  IS FN+PV + G   A A
Sbjct: 132 KKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPA 166

>d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} Length = 474

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Putative betaine aldehyde dehydrogenase YdcW
species: Escherichia coli [TaxId: 562]

 Score =  103 bits (258), Expect = 6e-25
 Identities = 35/134 (26%), Positives = 63/134 (47%), Gaps = 3/134 (2%)

Query: 248 RRLFLHKKKIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVK 307
            ++    +K    GY+  PT++ G   +  +V +E F P+V V PFD+ ++ + W N+ +
Sbjct: 344 IKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQ 403

Query: 308 QGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDS 367
            GL+SS++TKDV    +        C  +N +            GG+K +G G++     
Sbjct: 404 YGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFMLVSE---MPHGGQKLSGYGKDMSLYG 460

Query: 368 WKQYCRRSTVTINH 381
            + Y     V + H
Sbjct: 461 LEDYTVVRHVMVKH 474

>d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} Length = 474

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Putative betaine aldehyde dehydrogenase YdcW
species: Escherichia coli [TaxId: 562]

 Score = 96.8 bits (240), Expect = 1e-22
 Identities = 35/157 (22%), Positives = 61/157 (38%), Gaps = 1/157 (0%)

Query: 41  DGTSWKANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIV 100
           +G      GE  P  NP+TG+ +  + + + +     + ++ AA+A W       R E +
Sbjct: 8   NGELVSGEGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVRAECL 67

Query: 101 RQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGS-ILPSER 159
            ++ D +        +L S   GK L     +    I         +             
Sbjct: 68  LKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYL 127

Query: 160 PGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALV 196
            GH  +   +PLGVV  I+ +N+P+ +  W  A AL 
Sbjct: 128 EGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALA 164

>d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} Length = 474

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Putative betaine aldehyde dehydrogenase YdcW
species: Escherichia coli [TaxId: 562]

 Score = 41.3 bits (96), Expect = 2e-04
 Identities = 21/80 (26%), Positives = 33/80 (41%)

Query: 184 VAVYGWNAAIALVGVAVQSRFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQR 243
           V++ G  A    +     S   +  +ELGG   +IV +DAD+    + +       AGQ 
Sbjct: 220 VSLTGSIATGEHIISHTASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQD 279

Query: 244 CTTTRRLFLHKKKIDRPGYF 263
           CT   R++  K   D     
Sbjct: 280 CTAACRIYAQKGIYDTLVEK 299

>d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} Length = 499

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN
species: Archaeon Thermoproteus tenax [TaxId: 2271]

 Score =  101 bits (253), Expect = 3e-24
 Identities = 27/112 (24%), Positives = 47/112 (41%), Gaps = 2/112 (1%)

Query: 273 PHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSD 332
             +  +  RE FAP+        LD+AI   N    GL +++F +DV  + + +  +  +
Sbjct: 384 VKDMVLYKREVFAPVASAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAV--RLLE 441

Query: 333 CGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTINHGKE 384
            G I +N           FGG K +G  RE    + +      T+  N+  +
Sbjct: 442 VGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIVFNYKGK 493

>d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} Length = 499

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN
species: Archaeon Thermoproteus tenax [TaxId: 2271]

 Score = 83.1 bits (204), Expect = 6e-18
 Identities = 20/99 (20%), Positives = 42/99 (42%), Gaps = 1/99 (1%)

Query: 45  WKANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYA-AWAALPAPRRGEIVRQI 103
           W  +G+ I   +P    TIA V   + ++  R ++        +   +P   R  ++R+ 
Sbjct: 25  WGGSGQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRKA 84

Query: 104 GDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDY 142
            D +   L    +++ +  GK  +  +GEV+  +D    
Sbjct: 85  ADIIERNLDVFAEVLVMNAGKPKSAAVGEVKAAVDRLRL 123

>d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} Length = 499

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN
species: Archaeon Thermoproteus tenax [TaxId: 2271]

 Score = 41.9 bits (97), Expect = 1e-04
 Identities = 18/53 (33%), Positives = 27/53 (50%)

Query: 207 LLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKKKIDR 259
            ++ELGG +  IV EDADL+LA   +       AGQRC   + +   +    +
Sbjct: 258 YVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGK 310

>d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} Length = 504

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Vibrio harveyi [TaxId: 669]

 Score = 98.3 bits (243), Expect = 5e-23
 Identities = 24/155 (15%), Positives = 47/155 (30%), Gaps = 9/155 (5%)

Query: 49  GEIIPSINPSTGETIA-SVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDAL 107
             +  + N  TGE +  +       + ++   ++      +  L   +R  ++R I   L
Sbjct: 2   DNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASEL 61

Query: 108 RHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILP--------SER 159
             +   +     LE         GE+    +       +  + S             +  
Sbjct: 62  EARSDDIIARAHLETALPEVRLTGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPL 121

Query: 160 PGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIA 194
           P   +      LG V +  A NFP+A        A
Sbjct: 122 PKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTA 156

>d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} Length = 504

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Vibrio harveyi [TaxId: 669]

 Score = 81.7 bits (200), Expect = 1e-17
 Identities = 14/120 (11%), Positives = 40/120 (33%), Gaps = 9/120 (7%)

Query: 266 PTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFT--KDVTNLF 323
               +           E F P   +   +++ + ++ +  +   L+++I    +D   + 
Sbjct: 357 FVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIHATEEDYPQVS 416

Query: 324 KWLGPQGSDCGLINVNIPTNGAEI------GGAFGGEKYTGGGRESGSDSWKQYCRRSTV 377
           + +       G +  N    G E+      GG +    +       G+++  ++ R    
Sbjct: 417 QLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTH-SASTSVGAEAIHRWLRPVAY 475

>d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} Length = 414

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Gamma-glutamyl phosphate reductase
species: Thermotoga maritima [TaxId: 2336]

 Score = 83.9 bits (206), Expect = 2e-18
 Identities = 42/204 (20%), Positives = 66/204 (32%), Gaps = 26/204 (12%)

Query: 187 YGWNAAIALVGVAVQSRFGKLLLELGGNNA-IIVNEDADLNLAQQCLVFACCGTAGQRCT 245
                    +   V+      +LE G  N  I V+E ADL  A   ++ A     G    
Sbjct: 197 LVIPRGGYGLISFVRDNATVPVLETGVGNCHIFVDESADLKKAVPVIINAKTQRPGTCNA 256

Query: 246 TTRRLFLH----------------KKKIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVY 289
             + L                        R        +   +P        E    I+ 
Sbjct: 257 AEKLLVHEKIAKEFLPVIVEELRKHGVEVRGCEKTREIVPDVVPATEDDWPTEYLDLIIA 316

Query: 290 VFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGG 349
           +    ++DEAI    +   G S SI T++ +N  K++     D   + VN  T   + GG
Sbjct: 317 IKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFV--SEIDAAAVYVNASTRFTD-GG 373

Query: 350 AFGGEKYTGGGRESGSDSWKQYCR 373
            F      G G E G  + + + R
Sbjct: 374 QF------GFGAEIGISTQRFHAR 391

>d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} Length = 414

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Gamma-glutamyl phosphate reductase
species: Thermotoga maritima [TaxId: 2336]

 Score = 53.9 bits (128), Expect = 1e-08
 Identities = 18/139 (12%), Positives = 40/139 (28%), Gaps = 12/139 (8%)

Query: 78  IESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGE----- 132
            +  R A+          + + +++I + L  +   + +   +++ K    G+ E     
Sbjct: 7   AKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDR 66

Query: 133 -------VQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVA 185
                  + E I  C+  +GL       I    R   + +           I   + P  
Sbjct: 67  LALNDKRIDEMIKACETVIGLKDPVGEVIDSWVREDGLRIARVRVPIGPIGIIYESRPNV 126

Query: 186 VYGWNAAIALVGVAVQSRF 204
                      G  +  R 
Sbjct: 127 TVETTILALKSGNTILLRG 145

>d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 436

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Gamma-glutamyl phosphate reductase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 55.2 bits (132), Expect = 6e-09
 Identities = 32/193 (16%), Positives = 55/193 (28%), Gaps = 38/193 (19%)

Query: 196 VGVAVQSRFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLF---- 251
           V     +    +L    G  +I ++EDADL  A++  + A              L     
Sbjct: 212 VRKIKDTTKIPVLGHADGICSIYLDEDADLIKAKRISLDAKTNYPAGCNAMETLLINPKF 271

Query: 252 ---------------------------LHKKKIDRPGYFVEPTIVTGLPHNSRVVHRETF 284
                                         K  +           T      +   +E  
Sbjct: 272 SKWWEVLENLTLEGGVTIHATKDLKTAYFDKLNELGKLTEAIQCKTVDADEEQDFDKEFL 331

Query: 285 APIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPT-- 342
           +  +      S + AI   N      + +I T++  N  K++  +G D   +  N  T  
Sbjct: 332 SLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKANAEKFM--KGVDSSGVYWNASTRF 389

Query: 343 -NGAEIGGAFGGE 354
            +G   G  FG E
Sbjct: 390 ADGFRYG--FGAE 400