Psyllid ID: psy3822

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------14
Protein Sequence
MAEKLHKPKRKETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPSTYLPSSVAFCI
Secondary Structure (PSIPRED)
cccccccccHHHHHHHHHHHHHHHHHHHccccEEEEEccccccccEEEEEEHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccEEEEEHHHHHccHHHHHcccccccEEEccccEEc
Secondary Structure Prediction (SSPRO)
cHHHccccHHHHHHHHHHHHHHHHHHHcccccEEEEEEccHcccccHHHccHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHccHHHHHHHHHHHHHHHHHHHHHHHcHHHHcccEEEcc
Coil and Loop (DISEMBL)
maeklhkpkrkETVTEILRLGVKQlevyrhpkilsvlhpieecpdalafatEPVYASLASILAfqespapnhstnpvtggsgsspppanqsasrpthareyHFLDIEIKYgvaqvdsseftylyvpstylpssvafci
Flexible Loop (DISEMBL)
maeklhkpkrketvtEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTylyvpstylpssvafci
Low Complexity Region (SEG)
MAEKLHKPKRKETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTggsgsspppANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPSTYLPSSVAFCI
Disordered region (IsUnstruct)
*************VTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAF***********************************EYHFLDIEIKYGVAQVDSSEFTYLYVPSTYLPSSVAFC*
Disordered Region (DISOPRED)
********KRKETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAF***********************************EYHFLDIEIKYGVAQVDSSEFTYLYVPSTYLPSSVAFCI
Disordered Region (DISEMBL)
**********KETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQESP****************************HAREYHFLDIEIKYGVAQVDSSEFTYLYVPSTYLPSSVAFCI
Disordered Region (DISPRO)
MA**LHKPKRKETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQES**************************RPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPSTYLPSSVAFCI
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
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Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAEKLHKPKRKETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPSTYLPSSVAFCI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	138	2.2.26 [Sep-21-2011]
Q8CFE4	930	SCY1-like protein 2 OS=Mu	yes	N/A	0.659	0.097	0.359	4e-11
Q6P3W7	929	SCY1-like protein 2 OS=Ho	yes	N/A	0.652	0.096	0.373	5e-11

>sp|Q8CFE4|SCYL2_MOUSE SCY1-like protein 2 OS=Mus musculus GN=Scyl2 PE=1 SV=1

 Score = 66.6 bits (161), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 41/114 (35%), Positives = 61/114 (53%), Gaps = 23/114 (20%)

Query: 11  KETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAP 70
           K+ + + L+ GV+QL   RHP++L+V HP+EE  D LAF TEPV+ASLA++L   E    
Sbjct: 79  KDQIIDSLKRGVQQLTRLRHPRLLTVQHPLEESRDCLAFCTEPVFASLANVLGNWE---- 134

Query: 71  NHSTNPVTGGSGSSPPPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLY 124
                             N  +S     ++Y   D+E KYG+ QV S   ++L+
Sbjct: 135 ------------------NLPSSISPDIKDYKLYDVETKYGLLQV-SEGLSFLH 169

Component of AP2-containing clathrin coated structures at the plasma membrane or of endocytic coated vesicles. May be a serine/threonine-protein kinase. May regulate clathrin-dependent trafficking between the TGN and/or the endosomal system.
Mus musculus (taxid: 10090)

>sp|Q6P3W7|SCYL2_HUMAN SCY1-like protein 2 OS=Homo sapiens GN=SCYL2 PE=1 SV=1

 Score = 66.2 bits (160), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 43/115 (37%), Positives = 64/115 (55%), Gaps = 25/115 (21%)

Query: 11  KETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQES-PA 69
           K+ + + L+ GV+QL   RHP++L+V HP+EE  D LAF TEPV+ASLA++L   E+ P+
Sbjct: 79  KDQIIDSLKRGVQQLTRLRHPRLLTVQHPLEESRDCLAFCTEPVFASLANVLGNWENLPS 138

Query: 70  PNHSTNPVTGGSGSSPPPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLY 124
           P             SP             ++Y   D+E KYG+ QV S   ++L+
Sbjct: 139 P------------ISP-----------DIKDYKLYDVETKYGLLQV-SEGLSFLH 169

Component of AP2-containing clathrin coated structures at the plasma membrane or of endocytic coated vesicles. According to PubMed:15809293, probable serine/threonine-protein kinase that phosphorylates, in vitro, the beta2-subunit of the plasma membrane adapter complex AP2 and other proteins in presence of poly-L-lysine. According to PubMed:16914521, has no detectable kinase activity in vitro. May regulate clathrin-dependent trafficking between the TGN and/or the endosomal system.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	138
189235463	905	PREDICTED: similar to AGAP005207-PA [Tri	0.768	0.117	0.684	1e-34
270003539	793	hypothetical protein TcasGA2_TC002787 [T	0.768	0.133	0.684	2e-34
158292776	838	AGAP005207-PA [Anopheles gambiae str. PE	0.818	0.134	0.576	7e-30
195428279	649	GK16785 [Drosophila willistoni] gi|19415	0.840	0.178	0.533	3e-29
195376675	1187	GJ13252 [Drosophila virilis] gi|19415427	0.891	0.103	0.507	2e-28
195012717	606	GH16051 [Drosophila grimshawi] gi|193897	0.891	0.202	0.476	5e-27
340715855	825	PREDICTED: SCY1-like protein 2-like [Bom	0.775	0.129	0.551	5e-26
350396901	825	PREDICTED: SCY1-like protein 2-like [Bom	0.775	0.129	0.551	6e-26
328722526	437	PREDICTED: SCY1-like protein 2-like, par	0.760	0.240	0.520	2e-25
442631494	834	CG34356, isoform D [Drosophila melanogas	0.891	0.147	0.480	2e-25

>gi|189235463|ref|XP_001813924.1| PREDICTED: similar to AGAP005207-PA [Tribolium castaneum]

 Score =  150 bits (379), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 78/114 (68%), Positives = 86/114 (75%), Gaps = 8/114 (7%)

Query: 2   AEKLHKPKRKETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASI 61
           AEKLHKPKRKETVTEILR  V+QLE +RHPKIL VLHPIEEC D LAFA+EPV+ASLA+I
Sbjct: 159 AEKLHKPKRKETVTEILRSSVRQLERFRHPKILHVLHPIEECADTLAFASEPVFASLANI 218

Query: 62  LAFQESPAPNHSTNPVTGGSGSSPPPANQSASRPTHAREYHFLDIEIKYGVAQV 115
           LA QE  A NH     TG S        Q A RPTHAREY+FLDIE KYG+ Q+
Sbjct: 219 LAHQEGSA-NHGGITATGAS-------QQPAVRPTHAREYNFLDIEYKYGILQI 264

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270003539|gb|EEZ99986.1| hypothetical protein TcasGA2_TC002787 [Tribolium castaneum]

 Score =  150 bits (378), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 78/114 (68%), Positives = 86/114 (75%), Gaps = 8/114 (7%)

Query: 2   AEKLHKPKRKETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASI 61
           AEKLHKPKRKETVTEILR  V+QLE +RHPKIL VLHPIEEC D LAFA+EPV+ASLA+I
Sbjct: 63  AEKLHKPKRKETVTEILRSSVRQLERFRHPKILHVLHPIEECADTLAFASEPVFASLANI 122

Query: 62  LAFQESPAPNHSTNPVTGGSGSSPPPANQSASRPTHAREYHFLDIEIKYGVAQV 115
           LA QE  A NH     TG S        Q A RPTHAREY+FLDIE KYG+ Q+
Sbjct: 123 LAHQEGSA-NHGGITATGAS-------QQPAVRPTHAREYNFLDIEYKYGILQI 168

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|158292776|ref|XP_314106.3| AGAP005207-PA [Anopheles gambiae str. PEST] gi|157017152|gb|EAA09496.3| AGAP005207-PA [Anopheles gambiae str. PEST]

 Score =  135 bits (339), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 68/118 (57%), Positives = 87/118 (73%), Gaps = 5/118 (4%)

Query: 2   AEKLHKPKRKETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASI 61
           AEKLHKPKRKETVTEILR  VKQLE +RHPKIL ++H +EE  + L+FATEPV ASLA+I
Sbjct: 66  AEKLHKPKRKETVTEILRASVKQLERFRHPKILQIMHTVEESSETLSFATEPVIASLANI 125

Query: 62  LAFQESPAPNHSTNPVTG----GSGSSPPPANQSASRPTHAREYHFLDIEIKYGVAQV 115
           LA+Q S   ++S   +TG    G+     P + + +RP HA+EY FLDIE+KYG+ Q+
Sbjct: 126 LAYQVSDL-SYSGGTITGPPSTGASGQHCPNSVATNRPAHAKEYTFLDIELKYGILQI 182

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195428279|ref|XP_002062201.1| GK16785 [Drosophila willistoni] gi|194158286|gb|EDW73187.1| GK16785 [Drosophila willistoni]

 Score =  133 bits (334), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 63/118 (53%), Positives = 84/118 (71%), Gaps = 2/118 (1%)

Query: 1   MAEKLHKPKRKETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLAS 60
           +AEKLHKP+RKET+TE+L+  VK LE +RHP+IL + H +EE  D LAFA EP++ASL++
Sbjct: 490 IAEKLHKPRRKETITELLKSSVKTLERFRHPRILQIYHTVEESADTLAFAAEPIFASLSN 549

Query: 61  ILAFQESPA-PNHSTNPVTGGSG-SSPPPANQSASRPTHAREYHFLDIEIKYGVAQVD 116
           +LAF ES    N +  P  GG    + P AN    RP HA+EY+FLD+E+KYG  Q+D
Sbjct: 550 VLAFHESKTYENANVAPAAGGGTPQAQPIANAQPQRPAHAKEYNFLDMELKYGFLQLD 607

Source: Drosophila willistoni

Species: Drosophila willistoni

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195376675|ref|XP_002047118.1| GJ13252 [Drosophila virilis] gi|194154276|gb|EDW69460.1| GJ13252 [Drosophila virilis]

 Score =  130 bits (326), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 64/126 (50%), Positives = 87/126 (69%), Gaps = 3/126 (2%)

Query: 1   MAEKLHKPKRKETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLAS 60
           +AEKLHKP+RKET+TE+L+  VK LE +RHP+IL + H +EE  D LAFA EP++ASL++
Sbjct: 394 VAEKLHKPRRKETITELLKSSVKTLERFRHPRILQIYHTVEESADTLAFAAEPIFASLSN 453

Query: 61  ILAFQESPA-PNHSTNPVTGGSG-SSPPPANQSASRPTHAREYHFLDIEIKYGVAQVDSS 118
           +LAF ES    N S  P  GG    + P A     RP HA+EY+FLD+E+KYG  Q+ + 
Sbjct: 454 VLAFHESKTYENASVAPAAGGGTPQTQPAAGAQPQRPAHAKEYNFLDMELKYGFLQL-TE 512

Query: 119 EFTYLY 124
             +YL+
Sbjct: 513 ALSYLH 518

Source: Drosophila virilis

Species: Drosophila virilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195012717|ref|XP_001983732.1| GH16051 [Drosophila grimshawi] gi|193897214|gb|EDV96080.1| GH16051 [Drosophila grimshawi]

 Score =  125 bits (315), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 62/130 (47%), Positives = 90/130 (69%), Gaps = 7/130 (5%)

Query: 1   MAEKLHKPKRKETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLAS 60
           +AEKLHKP+RKET+TE+L+  VK LE +RHP+IL + H +EE  D LAFA EP++ASL++
Sbjct: 322 VAEKLHKPRRKETITELLKSSVKTLERFRHPRILQIYHTVEESADTLAFAAEPIFASLSN 381

Query: 61  ILAFQESPAPNHSTN--PVTGGSGSSPPPANQSAS----RPTHAREYHFLDIEIKYGVAQ 114
           +LAF ES    +++   P +GG+  + P    S      RP HA+EY+FLD+E+KYG  Q
Sbjct: 382 VLAFHESKTYENASVVPPASGGAPQTQPTTATSGGAQPQRPAHAKEYNFLDMELKYGFLQ 441

Query: 115 VDSSEFTYLY 124
           + +   +YL+
Sbjct: 442 L-TEALSYLH 450

Source: Drosophila grimshawi

Species: Drosophila grimshawi

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340715855|ref|XP_003396423.1| PREDICTED: SCY1-like protein 2-like [Bombus terrestris]

 Score =  122 bits (306), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 64/116 (55%), Positives = 81/116 (69%), Gaps = 9/116 (7%)

Query: 2   AEKLHKPKRKETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASI 61
            +KLHKPKRKETVTEILR G +Q+E + HPKIL     +EECPD+LAFA+EPV ASLA++
Sbjct: 63  VDKLHKPKRKETVTEILRNGARQMERFSHPKILQAFK-VEECPDSLAFASEPVLASLANV 121

Query: 62  LAFQESPAPN--HSTNPVTGGSGSSPPPANQSASRPTHAREYHFLDIEIKYGVAQV 115
           LA+QE  A N   S++ VT  + S       +  R T A+EY  LDIEIKYG+ Q+
Sbjct: 122 LAYQEQQANNVGQSSSNVTKQTSSV------AGHRATFAKEYELLDIEIKYGLLQI 171

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350396901|ref|XP_003484705.1| PREDICTED: SCY1-like protein 2-like [Bombus impatiens]

 Score =  122 bits (305), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 64/116 (55%), Positives = 81/116 (69%), Gaps = 9/116 (7%)

Query: 2   AEKLHKPKRKETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASI 61
            +KLHKPKRKETVTEILR G +Q+E + HPKIL     +EEC D+LAFA+EPV ASLA++
Sbjct: 63  VDKLHKPKRKETVTEILRNGARQMERFSHPKILQAFK-VEECADSLAFASEPVLASLANV 121

Query: 62  LAFQESPAPN--HSTNPVTGGSGSSPPPANQSASRPTHAREYHFLDIEIKYGVAQV 115
           LA+QE  A N   ST+ VT  + S       +  R T+A+EY  LDIEIKYG+ Q+
Sbjct: 122 LAYQEQQANNVGQSTSNVTKQTSSV------AGHRATYAKEYELLDIEIKYGLLQI 171

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328722526|ref|XP_001943974.2| PREDICTED: SCY1-like protein 2-like, partial [Acyrthosiphon pisum]

 Score =  120 bits (300), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 64/123 (52%), Positives = 81/123 (65%), Gaps = 18/123 (14%)

Query: 1   MAEKLHKPKRKETVTEILRLGVKQLEVYRHPK-ILSVLHPIEECPDALAFATEPVYASLA 59
           +A+KLHKP+RKETVTEIL+  V  LE+ R PK IL V+H +E+C D LAFA EPV ASLA
Sbjct: 11  LADKLHKPRRKETVTEILKKSVHYLEMLRQPKLILKVVHSVEDCNDTLAFAAEPVIASLA 70

Query: 60  SILAFQESPAPNHSTNPVTGGSGSSPPPANQSAS-------RPTHAREYHFLDIEIKYGV 112
           +ILA+Q S           GG   + PP+  ++        RP HAREY+FLD EIKYG+
Sbjct: 71  NILAYQAS----------VGGRAVNGPPSTGASIITATAMPRPAHAREYNFLDFEIKYGI 120

Query: 113 AQV 115
            Q+
Sbjct: 121 RQI 123

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|442631494|ref|NP_001097570.2| CG34356, isoform D [Drosophila melanogaster] gi|442631496|ref|NP_001261669.1| CG34356, isoform E [Drosophila melanogaster] gi|440215589|gb|ABW08513.2| CG34356, isoform D [Drosophila melanogaster] gi|440215590|gb|AGB94363.1| CG34356, isoform E [Drosophila melanogaster]

 Score =  120 bits (300), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 61/127 (48%), Positives = 86/127 (67%), Gaps = 4/127 (3%)

Query: 1   MAEKLHKPKRKETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLAS 60
           +AEKLHKP+RKET+TE+L+  VK LE +RHP+IL + H +EE  D LAFA+EP++ASL++
Sbjct: 72  IAEKLHKPRRKETITELLKSSVKTLERFRHPRILQIYHTVEESADTLAFASEPIFASLSN 131

Query: 61  ILAFQESP---APNHSTNPVTGGSGSSPPPANQSASRPTHAREYHFLDIEIKYGVAQVDS 117
           +LAF ES    A N +       +  +   AN    RP HA+EY+FLD+E+KYG  Q+ +
Sbjct: 132 VLAFHESKTYEATNVAPAAGGAAASQAQAAANTLPQRPAHAKEYNFLDMELKYGFLQL-T 190

Query: 118 SEFTYLY 124
               YL+
Sbjct: 191 EALAYLH 197

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	138
FB|FBgn0085385	1099	CG34356 [Drosophila melanogast	0.884	0.111	0.484	3.5e-26
UNIPROTKB|I3LKK5	291	I3LKK5 "Uncharacterized protei	0.434	0.206	0.524	5.4e-15
ZFIN|ZDB-GENE-041210-205	929	si:ch211-244b2.1 "si:ch211-244	0.434	0.064	0.475	1e-13
UNIPROTKB|E2RHE6	905	SCYL2 "Uncharacterized protein	0.434	0.066	0.508	1.6e-13
UNIPROTKB|F8VSC5	681	SCYL2 "SCY1-like protein 2" [H	0.434	0.088	0.508	2.4e-13
UNIPROTKB|F1NWS5	932	SCYL2 "Uncharacterized protein	0.434	0.064	0.491	2.8e-13
UNIPROTKB|F1MID0	929	SCYL2 "Uncharacterized protein	0.434	0.064	0.508	5.5e-13
UNIPROTKB|Q6P3W7	929	SCYL2 "SCY1-like protein 2" [H	0.434	0.064	0.508	5.5e-13
MGI|MGI:1289172	930	Scyl2 "SCY1-like 2 (S. cerevis	0.413	0.061	0.508	1.9e-12
RGD|1305665	930	Scyl2 "SCY1-like 2 (S. cerevis	0.413	0.061	0.508	1.9e-12

FB|FBgn0085385 CG34356 [Drosophila melanogaster (taxid:7227)]

 Score = 308 (113.5 bits), Expect = 3.5e-26, P = 3.5e-26
 Identities = 62/128 (48%), Positives = 85/128 (66%)

Query:     1 MAEKLHKPKRKETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLAS 60
             +AEKLHKP+RKET+TE+L+  VK LE +RHP+IL + H +EE  D LAFA+EP++ASL++
Sbjct:   337 IAEKLHKPRRKETITELLKSSVKTLERFRHPRILQIYHTVEESADTLAFASEPIFASLSN 396

Query:    61 ILAFQESPAPNHSTN--PVT--XXXXXXXXXANQSASRPTHAREYHFLDIEIKYGVAQVD 116
             +LAF ES     +TN  P             AN    RP HA+EY+FLD+E+KYG  Q+ 
Sbjct:   397 VLAFHESKT-YEATNVAPAAGGAAASQAQAAANTLPQRPAHAKEYNFLDMELKYGFLQLT 455

Query:   117 SSEFTYLY 124
              +   YL+
Sbjct:   456 EA-LAYLH 462

GO:0004672 "protein kinase activity" evidence=IEA;NAS

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|I3LKK5 I3LKK5 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 158 (60.7 bits), Expect = 5.4e-15, Sum P(2) = 5.4e-15
 Identities = 32/61 (52%), Positives = 45/61 (73%)

Query:    11 KETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQES-PA 69
             K+ + + L+ GV+QL   RHP++L+V HP+EE  D LAF TEPV+ASLA+IL   E+ P+
Sbjct:    79 KDQIIDSLKRGVQQLTRLRHPRLLTVQHPLEESRDCLAFCTEPVFASLANILGNWENLPS 138

Query:    70 P 70
             P
Sbjct:   139 P 139

GO:0005524 "ATP binding" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

ZFIN|ZDB-GENE-041210-205 si:ch211-244b2.1 "si:ch211-244b2.1" [Danio rerio (taxid:7955)]

 Score = 154 (59.3 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
 Identities = 29/61 (47%), Positives = 44/61 (72%)

Query:    11 KETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILA-FQESPA 69
             K+ + + L+ G++QL   RHP++L+V HP+EE  D LAF TEPV+ASLA++L  +   P+
Sbjct:    79 KDQIIDSLKKGIQQLTRLRHPRLLTVQHPLEESRDCLAFCTEPVFASLANVLGQWDNLPS 138

Query:    70 P 70
             P
Sbjct:   139 P 139

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

UNIPROTKB|E2RHE6 SCYL2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 157 (60.3 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
 Identities = 31/61 (50%), Positives = 45/61 (73%)

Query:    11 KETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQES-PA 69
             K+ + + L+ GV+QL   RHP++L+V HP+EE  D LAF TEPV+ASLA++L   E+ P+
Sbjct:    55 KDQIIDSLKRGVQQLTRLRHPRLLTVQHPLEESRDCLAFCTEPVFASLANVLGNWENLPS 114

Query:    70 P 70
             P
Sbjct:   115 P 115

GO:0005524 "ATP binding" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

UNIPROTKB|F8VSC5 SCYL2 "SCY1-like protein 2" [Homo sapiens (taxid:9606)]

 Score = 157 (60.3 bits), Expect = 2.4e-13, Sum P(2) = 2.4e-13
 Identities = 31/61 (50%), Positives = 45/61 (73%)

Query:    11 KETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQES-PA 69
             K+ + + L+ GV+QL   RHP++L+V HP+EE  D LAF TEPV+ASLA++L   E+ P+
Sbjct:    79 KDQIIDSLKRGVQQLTRLRHPRLLTVQHPLEESRDCLAFCTEPVFASLANVLGNWENLPS 138

Query:    70 P 70
             P
Sbjct:   139 P 139

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|F1NWS5 SCYL2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 151 (58.2 bits), Expect = 2.8e-13, Sum P(2) = 2.8e-13
 Identities = 30/61 (49%), Positives = 44/61 (72%)

Query:    11 KETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASIL-AFQESPA 69
             K+ + + L+ GV+QL   RHP++L+V HP+EE  D LAF TEPV ASLA++L ++   P+
Sbjct:    79 KDQIIDSLKRGVQQLTRLRHPRLLTVQHPLEESRDCLAFCTEPVCASLANVLGSWDNLPS 138

Query:    70 P 70
             P
Sbjct:   139 P 139

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0002092 "positive regulation of receptor internalization" evidence=IEA

GO:0005102 "receptor binding" evidence=IEA

GO:0008333 "endosome to lysosome transport" evidence=IEA

GO:0090090 "negative regulation of canonical Wnt receptor signaling pathway" evidence=IEA

GO:2000286 "receptor internalization involved in canonical Wnt receptor signaling pathway" evidence=IEA

GO:2000370 "positive regulation of clathrin-mediated endocytosis" evidence=IEA

UNIPROTKB|F1MID0 SCYL2 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 157 (60.3 bits), Expect = 5.5e-13, Sum P(2) = 5.5e-13
 Identities = 31/61 (50%), Positives = 45/61 (73%)

Query:    11 KETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQES-PA 69
             K+ + + L+ GV+QL   RHP++L+V HP+EE  D LAF TEPV+ASLA++L   E+ P+
Sbjct:    79 KDQIIDSLKRGVQQLTRLRHPRLLTVQHPLEESRDCLAFCTEPVFASLANVLGNWENLPS 138

Query:    70 P 70
             P
Sbjct:   139 P 139

GO:2000370 "positive regulation of clathrin-mediated endocytosis" evidence=IEA

GO:2000286 "receptor internalization involved in canonical Wnt receptor signaling pathway" evidence=IEA

GO:0090090 "negative regulation of canonical Wnt receptor signaling pathway" evidence=IEA

GO:0008333 "endosome to lysosome transport" evidence=IEA

GO:0005102 "receptor binding" evidence=IEA

GO:0002092 "positive regulation of receptor internalization" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

UNIPROTKB|Q6P3W7 SCYL2 "SCY1-like protein 2" [Homo sapiens (taxid:9606)]

 Score = 157 (60.3 bits), Expect = 5.5e-13, Sum P(2) = 5.5e-13
 Identities = 31/61 (50%), Positives = 45/61 (73%)

Query:    11 KETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQES-PA 69
             K+ + + L+ GV+QL   RHP++L+V HP+EE  D LAF TEPV+ASLA++L   E+ P+
Sbjct:    79 KDQIIDSLKRGVQQLTRLRHPRLLTVQHPLEESRDCLAFCTEPVFASLANVLGNWENLPS 138

Query:    70 P 70
             P
Sbjct:   139 P 139

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0010008 "endosome membrane" evidence=IEA

GO:0030136 "clathrin-coated vesicle" evidence=IEA

GO:0048471 "perinuclear region of cytoplasm" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0005102 "receptor binding" evidence=IPI

GO:2000286 "receptor internalization involved in canonical Wnt receptor signaling pathway" evidence=IDA

GO:2000370 "positive regulation of clathrin-mediated endocytosis" evidence=IDA

GO:0002092 "positive regulation of receptor internalization" evidence=IDA

GO:0008333 "endosome to lysosome transport" evidence=IDA

GO:0090090 "negative regulation of canonical Wnt receptor signaling pathway" evidence=IDA

MGI|MGI:1289172 Scyl2 "SCY1-like 2 (S. cerevisiae)" [Mus musculus (taxid:10090)]

 Score = 151 (58.2 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
 Identities = 29/57 (50%), Positives = 42/57 (73%)

Query:    11 KETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQES 67
             K+ + + L+ GV+QL   RHP++L+V HP+EE  D LAF TEPV+ASLA++L   E+
Sbjct:    79 KDQIIDSLKRGVQQLTRLRHPRLLTVQHPLEESRDCLAFCTEPVFASLANVLGNWEN 135

GO:0002092 "positive regulation of receptor internalization" evidence=ISO

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005102 "receptor binding" evidence=ISO

GO:0005515 "protein binding" evidence=IPI

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005768 "endosome" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0008333 "endosome to lysosome transport" evidence=ISO

GO:0016020 "membrane" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0031410 "cytoplasmic vesicle" evidence=IEA

GO:0090090 "negative regulation of canonical Wnt receptor signaling pathway" evidence=ISO

GO:2000286 "receptor internalization involved in canonical Wnt receptor signaling pathway" evidence=ISO

GO:2000370 "positive regulation of clathrin-mediated endocytosis" evidence=ISO

RGD|1305665 Scyl2 "SCY1-like 2 (S. cerevisiae)" [Rattus norvegicus (taxid:10116)]

 Score = 151 (58.2 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
 Identities = 29/57 (50%), Positives = 42/57 (73%)

Query:    11 KETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQES 67
             K+ + + L+ GV+QL   RHP++L+V HP+EE  D LAF TEPV+ASLA++L   E+
Sbjct:    79 KDQIIDSLKRGVQQLTRLRHPRLLTVQHPLEESRDCLAFCTEPVFASLANVLGNWEN 135

GO:0002092 "positive regulation of receptor internalization" evidence=IEA;ISO

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005102 "receptor binding" evidence=IEA;ISO

GO:0005524 "ATP binding" evidence=IEA

GO:0008333 "endosome to lysosome transport" evidence=IEA;ISO

GO:0090090 "negative regulation of canonical Wnt receptor signaling pathway" evidence=IEA;ISO

GO:2000286 "receptor internalization involved in canonical Wnt receptor signaling pathway" evidence=IEA;ISO

GO:2000370 "positive regulation of clathrin-mediated endocytosis" evidence=IEA;ISO

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	138
KOG0595|consensus	429		99.64
KOG0583|consensus	370		99.52
KOG0611|consensus	668		99.5
KOG0615|consensus	475		99.47
KOG0597|consensus	808		99.45
KOG0192|consensus	362		99.45
KOG0600|consensus	560		99.45
KOG0663|consensus	419		99.43
KOG0575|consensus	592		99.43
KOG0661|consensus	538		99.42
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.36
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.36
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.35
KOG0588|consensus	786		99.34
KOG0589|consensus	426		99.34
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.33
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.33
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.33
KOG0198|consensus	313		99.33
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.33
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.33
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.32
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.32
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.32
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.32
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.31
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.31
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.31
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.31
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.31
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.3
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.3
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.3
KOG0585|consensus	576		99.3
KOG1243|consensus	690		99.3
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.3
KOG0586|consensus	596		99.3
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.29
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.29
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.29
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.29
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.28
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.28
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.28
PTZ00267	478	NIMA-related protein kinase; Provisional	99.28
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.28
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.28
KOG0659|consensus	318		99.28
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.28
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.28
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.28
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.27
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.27
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.27
PHA02988	283	hypothetical protein; Provisional	99.27
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.27
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.27
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.27
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.27
KOG0032|consensus	382		99.26
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.26
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.26
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.25
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.25
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.25
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.24
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.24
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.24
KOG0591|consensus	375		99.24
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.24
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.24
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.24
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.24
PLN00009	294	cyclin-dependent kinase A; Provisional	99.24
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.23
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.23
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.23
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.23
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.23
KOG0660|consensus	359		99.23
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.22
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.22
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.22
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.22
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.22
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.22
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.22
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.22
KOG0581|consensus	364		99.21
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.21
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.21
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.21
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.21
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.21
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.21
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.21
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.21
KOG0582|consensus	516		99.21
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.21
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.2
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.2
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.2
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.2
KOG4717|consensus	864		99.2
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.2
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.2
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.2
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.2
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.2
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.2
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.2
PHA03212	391	serine/threonine kinase US3; Provisional	99.19
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.19
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.19
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.19
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.19
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.19
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.19
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.19
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.19
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.19
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.19
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.18
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.18
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.18
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.18
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.18
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.18
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.18
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.18
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.18
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.18
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.18
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.17
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.17
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.17
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.17
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.17
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.17
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.17
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.17
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.17
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.17
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.17
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.17
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.17
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.17
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.17
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.17
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.17
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.17
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.17
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.17
KOG0197|consensus	468		99.17
KOG0598|consensus	357		99.16
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.16
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.16
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.16
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.16
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.16
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.16
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.16
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.16
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.16
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.16
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.15
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.15
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.15
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.15
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.15
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.15
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.15
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.15
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.15
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.15
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.15
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.15
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.14
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.14
KOG0592|consensus	604		99.14
KOG0593|consensus	396		99.14
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.14
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.14
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.14
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.14
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.13
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.13
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.13
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.13
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.13
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.13
KOG0594|consensus	323		99.13
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.13
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.13
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.13
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.13
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.13
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.13
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.13
KOG0584|consensus	632		99.13
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.13
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.13
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.13
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.12
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.12
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.12
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.12
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.12
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.12
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.12
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.12
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.12
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.12
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.12
PHA03207	392	serine/threonine kinase US3; Provisional	99.12
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.11
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.11
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.11
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.11
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.11
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.11
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.1
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.1
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.1
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.1
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.1
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.1
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.1
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.1
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.1
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.1
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.1
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.1
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.09
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.09
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.09
KOG0578|consensus	550		99.09
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.09
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.09
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.09
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.08
PHA03209	357	serine/threonine kinase US3; Provisional	99.08
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.08
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.08
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.08
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.08
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.07
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.07
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.07
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.07
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.07
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.07
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.07
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.07
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.07
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.07
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.07
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.06
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.06
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.06
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.06
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.06
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.06
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.06
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.06
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.05
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.05
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.05
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.05
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.05
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.05
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.05
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.04
PHA03210	501	serine/threonine kinase US3; Provisional	99.04
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.04
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.04
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.04
PHA03211	461	serine/threonine kinase US3; Provisional	99.04
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.04
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.04
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.04
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.03
KOG0610|consensus	459		99.03
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.03
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.03
KOG0658|consensus	364		99.03
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.02
KOG0033|consensus	355		99.02
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.02
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.02
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.02
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.02
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.02
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.02
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.02
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.02
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.01
KOG0580|consensus	281		99.01
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.01
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.01
KOG0194|consensus	474		99.0
KOG4250|consensus	732		99.0
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.0
PTZ00036	440	glycogen synthase kinase; Provisional	99.0
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.0
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.0
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.0
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.0
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	98.99
KOG0616|consensus	355		98.99
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	98.99
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	98.98
KOG1026|consensus	774		98.98
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	98.98
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	98.98
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	98.97
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	98.97
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	98.96
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	98.96
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	98.94
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	98.93
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	98.93
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	98.93
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	98.93
KOG4236|consensus	888		98.92
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	98.92
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	98.91
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	98.91
KOG1989|consensus	738		98.9
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	98.9
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	98.9
PTZ00283	496	serine/threonine protein kinase; Provisional	98.9
KOG0574|consensus	502		98.89
KOG0577|consensus	948		98.88
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	98.88
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	98.88
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	98.88
KOG0607|consensus	463		98.87
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	98.87
KOG0666|consensus	438		98.87
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	98.86
KOG0599|consensus	411		98.86
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	98.85
PRK10345	210	hypothetical protein; Provisional	98.85
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	98.84
KOG1187|consensus	361		98.83
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	98.82
PTZ00284	467	protein kinase; Provisional	98.82
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	98.82
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	98.8
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	98.79
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	98.75
KOG0662|consensus	292		98.74
KOG1094|consensus	807		98.73
KOG4645|consensus	1509		98.71
KOG4721|consensus	904		98.71
KOG4257|consensus	974		98.7
KOG0668|consensus	338		98.66
KOG1152|consensus	772		98.65
KOG0694|consensus	694		98.62
KOG0604|consensus	400		98.55
KOG0605|consensus	550		98.5
KOG4278|consensus	1157		98.47
KOG4279|consensus	1226		98.46
KOG1095|consensus	1025		98.43
KOG0669|consensus	376		98.42
KOG1027|consensus	903		98.41
KOG0576|consensus	829		98.37
KOG0667|consensus	586		98.36
KOG0199|consensus	1039		98.35
KOG1151|consensus	775		98.33
KOG0579|consensus	1187		98.31
KOG2345|consensus	302		98.3
KOG0596|consensus	677		98.29
KOG0690|consensus	516		98.28
KOG0201|consensus	467		98.27
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	98.25
PRK09188	365	serine/threonine protein kinase; Provisional	98.22
KOG0200|consensus	609		98.2
KOG1290|consensus	590		98.19
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	98.17
KOG0193|consensus	678		98.17
KOG0665|consensus	369		98.1
KOG0587|consensus	953		98.06
KOG1025|consensus	1177		98.04
KOG0608|consensus	1034		98.04
PLN00181	793	protein SPA1-RELATED; Provisional	98.01
PRK14879	211	serine/threonine protein kinase; Provisional	97.98
smart00090	237	RIO RIO-like kinase.	97.94
PHA02882	294	putative serine/threonine kinase; Provisional	97.91
KOG0196|consensus	996		97.89
PRK09605	535	bifunctional UGMP family protein/serine/threonine	97.87
COG0515	384	SPS1 Serine/threonine protein kinase [General func	97.86
KOG0603|consensus	612		97.81
KOG1035|consensus	1351		97.8
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	97.73
KOG0614|consensus	732		97.73
KOG3653|consensus	534		97.67
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	97.65
PRK12274	218	serine/threonine protein kinase; Provisional	97.58
KOG0664|consensus	449		97.56
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	97.53
KOG2052|consensus	513		97.5
KOG0671|consensus	415		97.38
KOG0195|consensus	448		97.36
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	97.32
KOG0590|consensus	601		97.25
KOG1345|consensus	378		97.24
KOG0986|consensus	591		97.21
PLN03224	507	probable serine/threonine protein kinase; Provisio	97.2
KOG0612|consensus	1317		96.94
KOG1167|consensus	418		96.91
KOG3741|consensus	655		96.82
KOG0984|consensus	282		96.77
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	96.77
KOG1164|consensus	322		96.64
KOG1266|consensus	458		96.6
KOG0695|consensus	593		96.51
KOG0696|consensus	683		96.49
KOG1023|consensus	484		96.43
KOG4158|consensus	598		96.16
KOG1024|consensus	563		96.15
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	96.08
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	96.05
KOG0983|consensus	391		95.49
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	95.43
KOG0670|consensus	752		95.37
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	94.69
KOG1240|consensus	1431		94.11
KOG1006|consensus	361		92.83
KOG0603|consensus	612		92.35
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	92.2
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	90.4
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	88.28
PLN02876	822	acyl-CoA dehydrogenase	85.86
KOG0590|consensus	601		85.79
KOG0601|consensus	524		85.58
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	83.77
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	83.04
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	80.33

>KOG0595|consensus

Probab=99.64  E-value=9.4e-16  Score=132.90  Aligned_cols=96  Identities=20%  Similarity=0.267  Sum_probs=81.4

Q ss_pred             ccCCCCcchHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCC
Q psy3822           4 KLHKPKRKETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSG   82 (138)
Q Consensus         4 k~~K~~~~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~   82 (138)
                      ++.|.+......+.|.+|+.+|+.|+|||||++++.+ ++++.+|||||||. |+|..+|..++                
T Consensus        42 ~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~-~~~~~i~lVMEyC~gGDLs~yi~~~~----------------  104 (429)
T KOG0595|consen   42 CIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCI-EDDDFIYLVMEYCNGGDLSDYIRRRG----------------  104 (429)
T ss_pred             eehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEE-ecCCeEEEEEEeCCCCCHHHHHHHcC----------------
Confidence            4455444566889999999999999999999999955 46889999999995 89999999654                


Q ss_pred             CCCCCCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          83 SSPPPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                         .++|.-+++++.||+.|| +|||++.    .+.|.++--
T Consensus       105 -------------------~l~e~t~r~Fm~QLA~al-q~L~~~~IiHRDLKPQNiLL  142 (429)
T KOG0595|consen  105 -------------------RLPEATARHFMQQLASAL-QFLHENNIIHRDLKPQNILL  142 (429)
T ss_pred             -------------------CCCHHHHHHHHHHHHHHH-HHHHHCCeeeccCCcceEEe
Confidence                               589999999999999999 9999866    566776643

>KOG0583|consensus

Probab=99.52  E-value=4.2e-14  Score=120.62  Aligned_cols=87  Identities=17%  Similarity=0.265  Sum_probs=74.3

Q ss_pred             hHHHHHHHHHHHHhhhCC-CCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYR-HPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPAN   89 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLr-HPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (138)
                      ..+.+.++||+.+|++++ ||||+++++.++ +.+.+|+|||||. |+|.+.+.+..                       
T Consensus        60 ~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~-t~~~~~ivmEy~~gGdL~~~i~~~g-----------------------  115 (370)
T KOG0583|consen   60 QKLDELIKREISILRRLRSHPNIIRLLEVFA-TPTKIYIVMEYCSGGDLFDYIVNKG-----------------------  115 (370)
T ss_pred             cccchhhHHHHHHHHHhccCCCEeEEEEEEe-cCCeEEEEEEecCCccHHHHHHHcC-----------------------
Confidence            467788999999999999 999999999776 6778999999996 59999998632                       


Q ss_pred             CCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcce
Q psy3822          90 QSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVA  135 (138)
Q Consensus        90 ~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~  135 (138)
                                  +|.|.+++.++.||+.|+ +|||+..    .+.|.++.
T Consensus       116 ------------~l~E~~ar~~F~Qlisav-~y~H~~gi~HRDLK~ENil  152 (370)
T KOG0583|consen  116 ------------RLKEDEARKYFRQLISAV-AYCHSRGIVHRDLKPENIL  152 (370)
T ss_pred             ------------CCChHHHHHHHHHHHHHH-HHHHhCCEeeCCCCHHHEE
Confidence                        689999999999999999 9999974    44455443

>KOG0611|consensus

Probab=99.50  E-value=5.2e-14  Score=123.80  Aligned_cols=79  Identities=16%  Similarity=0.179  Sum_probs=71.1

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      ++.+-.+||||.+|..|.||||+++||+|| .++.+.+||||.. |+|.+++.+.+                        
T Consensus        94 eqDlvhIRREIeIMSsLNHPhII~IyEVFE-NkdKIvivMEYaS~GeLYDYiSer~------------------------  148 (668)
T KOG0611|consen   94 EQDLVHIRREIEIMSSLNHPHIIQIYEVFE-NKDKIVIVMEYASGGELYDYISERG------------------------  148 (668)
T ss_pred             HHHHHHHHHHHHHHhhcCCCceeehhhhhc-CCceEEEEEEecCCccHHHHHHHhc------------------------
Confidence            455667799999999999999999999776 6899999999985 79999998654                        


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS  127 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a  127 (138)
                                 .|+|.|++++|.||+.|+ .|||.+.
T Consensus       149 -----------~LsErEaRhfFRQIvSAV-hYCHknr  173 (668)
T KOG0611|consen  149 -----------SLSEREARHFFRQIVSAV-HYCHKNR  173 (668)
T ss_pred             -----------cccHHHHHHHHHHHHHHH-HHHhhcc
Confidence                       599999999999999999 9999875

>KOG0615|consensus

Probab=99.47  E-value=1e-13  Score=120.89  Aligned_cols=82  Identities=18%  Similarity=0.166  Sum_probs=71.0

Q ss_pred             HHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          17 ILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASRP   95 (138)
Q Consensus        17 ~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   95 (138)
                      .+++|+.+|++|.|||||++++.+++ .++.|+|||||. |+|.+.+....                             
T Consensus       222 ~v~~EieILkkL~HP~IV~~~d~f~~-~ds~YmVlE~v~GGeLfd~vv~nk-----------------------------  271 (475)
T KOG0615|consen  222 DVQNEIEILKKLSHPNIVRIKDFFEV-PDSSYMVLEYVEGGELFDKVVANK-----------------------------  271 (475)
T ss_pred             hhHHHHHHHHhcCCCCEEEEeeeeec-CCceEEEEEEecCccHHHHHHhcc-----------------------------
Confidence            36899999999999999999997764 678999999995 79999997443                             


Q ss_pred             cccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcce
Q psy3822          96 THAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVA  135 (138)
Q Consensus        96 ~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~  135 (138)
                            .+.|.+-|.++.|++.|+ .|||+.+    .+.|.+|.
T Consensus       272 ------~l~ed~~K~~f~Qll~av-kYLH~~GI~HRDiKPeNIL  308 (475)
T KOG0615|consen  272 ------YLREDLGKLLFKQLLTAV-KYLHSQGIIHRDIKPENIL  308 (475)
T ss_pred             ------ccccchhHHHHHHHHHHH-HHHHHcCcccccCCcceEE
Confidence                  577888899999999999 9999866    56788774

>KOG0597|consensus

Probab=99.45  E-value=1.4e-13  Score=124.43  Aligned_cols=88  Identities=24%  Similarity=0.280  Sum_probs=78.5

Q ss_pred             cCCCCcchHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCC
Q psy3822           5 LHKPKRKETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSS   84 (138)
Q Consensus         5 ~~K~~~~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~   84 (138)
                      +.|..+.+..+..+++|+.+|++|+|||||++++.+| ++..+|.||||+.|+|+.+|.+.+                  
T Consensus        35 i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfE-t~~~~~vVte~a~g~L~~il~~d~------------------   95 (808)
T KOG0597|consen   35 IDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFE-TSAHLWVVTEYAVGDLFTILEQDG------------------   95 (808)
T ss_pred             ehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhc-ccceEEEEehhhhhhHHHHHHhcc------------------
Confidence            4555566778899999999999999999999999887 688999999999999999998654                  


Q ss_pred             CCCCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCCCc
Q psy3822          85 PPPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPSTY  129 (138)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a~~  129 (138)
                                       .|.|..++.+..|+..|| .|||++.-+
T Consensus        96 -----------------~lpEe~v~~~a~~LVsaL-~yLhs~ril  122 (808)
T KOG0597|consen   96 -----------------KLPEEQVRAIAYDLVSAL-YYLHSNRIL  122 (808)
T ss_pred             -----------------CCCHHHHHHHHHHHHHHH-HHHHhcCcc
Confidence                             699999999999999999 999998743

>KOG0192|consensus

Probab=99.45  E-value=3.6e-13  Score=115.00  Aligned_cols=80  Identities=19%  Similarity=0.178  Sum_probs=69.2

Q ss_pred             HHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSAS   93 (138)
Q Consensus        15 ~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (138)
                      .+.+++|+.+|.+|+|||||++++...+....+++||||+. |+|..+|....                           
T Consensus        83 ~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~GsL~~~l~~~~---------------------------  135 (362)
T KOG0192|consen   83 RKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPGGSLSVLLHKKR---------------------------  135 (362)
T ss_pred             HHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCCCcHHHHHhhcc---------------------------
Confidence            78999999999999999999999977654437999999994 89999998641                           


Q ss_pred             CCcccccCCccHHHHHHHHHHHHHHHHhhhcCCCC
Q psy3822          94 RPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPST  128 (138)
Q Consensus        94 ~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a~  128 (138)
                            ...|+...+-.+++||+.|+ +|||+.+.
T Consensus       136 ------~~~l~~~~~l~~aldiArGm-~YLH~~~~  163 (362)
T KOG0192|consen  136 ------KRKLPLKVRLRIALDIARGM-EYLHSEGP  163 (362)
T ss_pred             ------cCCCCHHHHHHHHHHHHHHH-HHHhcCCC
Confidence                  12577788889999999999 99999886

>KOG0600|consensus

Probab=99.45  E-value=2e-13  Score=121.20  Aligned_cols=89  Identities=18%  Similarity=0.175  Sum_probs=76.1

Q ss_pred             ccCCCCcchHHHHHHHHHHHHhhhCCCCCeeEEeceeeec-CCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCC
Q psy3822           4 KLHKPKRKETVTEILRLGVKQLEVYRHPKILSVLHPIEEC-PDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSG   82 (138)
Q Consensus         4 k~~K~~~~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~-~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~   82 (138)
                      ||.....++...-..-|||.+|++|.||||+.+.+-+.+. ..++|+|+||+..+|.-++....                
T Consensus       149 Kvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlVFeYMdhDL~GLl~~p~----------------  212 (560)
T KOG0600|consen  149 KVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLVFEYMDHDLSGLLSSPG----------------  212 (560)
T ss_pred             EeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEEEecccchhhhhhcCCC----------------
Confidence            4544445567778889999999999999999999977664 46999999999999999997432                


Q ss_pred             CCCCCCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC
Q psy3822          83 SSPPPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS  127 (138)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a  127 (138)
                                        ..|+|.+||+++.||++|| +|||...
T Consensus       213 ------------------vkft~~qIKc~mkQLl~Gl-~~cH~~g  238 (560)
T KOG0600|consen  213 ------------------VKFTEPQIKCYMKQLLEGL-EYCHSRG  238 (560)
T ss_pred             ------------------cccChHHHHHHHHHHHHHH-HHHhhcC
Confidence                              3799999999999999999 9999876

>KOG0663|consensus

Probab=99.43  E-value=2.4e-13  Score=116.64  Aligned_cols=84  Identities=21%  Similarity=0.125  Sum_probs=72.7

Q ss_pred             HHHHHHHHhhhCCCCCeeEEeceeeecC-CeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          17 ILRLGVKQLEVYRHPKILSVLHPIEECP-DALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASRP   95 (138)
Q Consensus        17 ~lrrEi~~L~rLrHPnIL~l~e~~ee~~-~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   95 (138)
                      .-.|||.+|.+.+|||||++.+.++.+. +.+|+|||||..+|.++|....                             
T Consensus       121 tsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~VMe~~EhDLksl~d~m~-----------------------------  171 (419)
T KOG0663|consen  121 TSLREINILLKARHPNIVEVKEVVVGSNMDKIYIVMEYVEHDLKSLMETMK-----------------------------  171 (419)
T ss_pred             hhHHHHHHHHhcCCCCeeeeEEEEeccccceeeeeHHHHHhhHHHHHHhcc-----------------------------
Confidence            3469999999999999999999888654 6899999999999999998654                             


Q ss_pred             cccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcce
Q psy3822          96 THAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVA  135 (138)
Q Consensus        96 ~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~  135 (138)
                           .+|.+-|+|..++|+++|| +|||.+-    .+.||++.
T Consensus       172 -----q~F~~~evK~L~~QlL~gl-k~lH~~wilHRDLK~SNLL  209 (419)
T KOG0663|consen  172 -----QPFLPGEVKTLMLQLLRGL-KHLHDNWILHRDLKTSNLL  209 (419)
T ss_pred             -----CCCchHHHHHHHHHHHHHH-HHHhhceeEecccchhhee
Confidence                 1689999999999999999 9999864    55677764

>KOG0575|consensus

Probab=99.43  E-value=4.2e-13  Score=120.52  Aligned_cols=79  Identities=19%  Similarity=0.204  Sum_probs=70.7

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      ....+.+.+||++.+.|.|||||++++-|| +++.+|||.|+|. +||..+++..                         
T Consensus        59 ~~~reKv~~EIeIHr~L~HpnIV~f~~~FE-Ds~nVYivLELC~~~sL~el~Krr-------------------------  112 (592)
T KOG0575|consen   59 PKQREKVLNEIEIHRSLKHPNIVQFYHFFE-DSNNVYIVLELCHRGSLMELLKRR-------------------------  112 (592)
T ss_pred             cchHHHHHHHHHHHHhcCCCcEEeeeeEee-cCCceEEEEEecCCccHHHHHHhc-------------------------
Confidence            456688899999999999999999999776 5789999999995 8999999832                         


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS  127 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a  127 (138)
                                ..|+|.|+++++.||+.|| .|||+..
T Consensus       113 ----------k~ltEpEary~l~QIv~Gl-kYLH~~~  138 (592)
T KOG0575|consen  113 ----------KPLTEPEARYFLRQIVEGL-KYLHSLG  138 (592)
T ss_pred             ----------CCCCcHHHHHHHHHHHHHH-HHHHhcC
Confidence                      2799999999999999999 9999976

>KOG0661|consensus

Probab=99.42  E-value=1.6e-13  Score=121.21  Aligned_cols=81  Identities=19%  Similarity=0.209  Sum_probs=71.5

Q ss_pred             HHHHHHhhhCC-CCCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcc
Q psy3822          19 RLGVKQLEVYR-HPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASRPTH   97 (138)
Q Consensus        19 rrEi~~L~rLr-HPnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   97 (138)
                      -|||+.|+||. |||||++.|.+.|....|||||||+.+.|..+++.+.                               
T Consensus        56 LREvksL~kln~hpniikL~Evi~d~~~~L~fVfE~Md~NLYqLmK~R~-------------------------------  104 (538)
T KOG0661|consen   56 LREVKSLRKLNPHPNIIKLKEVIRDNDRILYFVFEFMDCNLYQLMKDRN-------------------------------  104 (538)
T ss_pred             HHHHHHHHhcCCCCcchhhHHHhhccCceEeeeHHhhhhhHHHHHhhcC-------------------------------
Confidence            48999999999 9999999999987555999999999999999998553                               


Q ss_pred             cccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcc
Q psy3822          98 AREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSV  134 (138)
Q Consensus        98 ~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~  134 (138)
                         ..|+|.+|+.++.||++|| +|+|.++    .+.|.++
T Consensus       105 ---r~fse~~irnim~QilqGL-~hiHk~GfFHRDlKPENi  141 (538)
T KOG0661|consen  105 ---RLFSESDIRNIMYQILQGL-AHIHKHGFFHRDLKPENI  141 (538)
T ss_pred             ---CcCCHHHHHHHHHHHHHHH-HHHHhcCcccccCChhhe
Confidence               2799999999999999999 9999987    4456554

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.36  E-value=3.2e-12  Score=101.62  Aligned_cols=87  Identities=15%  Similarity=0.072  Sum_probs=72.6

Q ss_pred             HHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASR   94 (138)
Q Consensus        15 ~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (138)
                      .+.+.+|+.+|++|+||||+++++.+. +.+.+++||||+.++|.+.+....                            
T Consensus        47 ~~~~~~E~~~l~~l~h~niv~~~~~~~-~~~~~~lv~e~~~~~l~~~l~~~~----------------------------   97 (288)
T cd07871          47 PCTAIREVSLLKNLKHANIVTLHDIIH-TERCLTLVFEYLDSDLKQYLDNCG----------------------------   97 (288)
T ss_pred             chhHHHHHHHHHhCCCCCEeeEEEEEc-CCCeEEEEEeCCCcCHHHHHHhcC----------------------------
Confidence            456789999999999999999999776 467899999999999999887432                            


Q ss_pred             CcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcceee
Q psy3822          95 PTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAFC  137 (138)
Q Consensus        95 ~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~~  137 (138)
                            ..+++.+++.++.||++|| +|||+..    .+.|++|.++
T Consensus        98 ------~~~~~~~~~~~~~qi~~aL-~~LH~~~ivH~dlkp~Nil~~  137 (288)
T cd07871          98 ------NLMSMHNVKIFMFQLLRGL-SYCHKRKILHRDLKPQNLLIN  137 (288)
T ss_pred             ------CCCCHHHHHHHHHHHHHHH-HHHHhCCcccCCCCHHHEEEC
Confidence                  1477889999999999999 9999854    4558887663

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.36  E-value=3.7e-12  Score=102.25  Aligned_cols=86  Identities=14%  Similarity=0.212  Sum_probs=70.5

Q ss_pred             HHHHHHHHHHhhhCCCCCeeEEeceeeecC----CeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVYRHPKILSVLHPIEECP----DALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        15 ~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~----~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      ...+.+|+.+|++|+||||+++++.+....    ..+|+||||+.++|.+++....                        
T Consensus        43 ~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~------------------------   98 (338)
T cd07859          43 ATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYVVFELMESDLHQVIKAND------------------------   98 (338)
T ss_pred             HHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEEEEecCCCCHHHHHHhcc------------------------
Confidence            356789999999999999999998664322    3599999999999999887432                        


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                 .+++.+++.++.||++|| .|||+..    .+.|++|.+
T Consensus        99 -----------~~~~~~~~~i~~qi~~aL-~~LH~~~ivH~dlkp~NIll  136 (338)
T cd07859          99 -----------DLTPEHHQFFLYQLLRAL-KYIHTANVFHRDLKPKNILA  136 (338)
T ss_pred             -----------cCCHHHHHHHHHHHHHHH-HHHHHCCeecCCCCHHHeEE
Confidence                       588899999999999999 9999865    345777765

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.35  E-value=7.6e-12  Score=101.30  Aligned_cols=91  Identities=13%  Similarity=0.156  Sum_probs=75.2

Q ss_pred             chHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          11 KETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPAN   89 (138)
Q Consensus        11 ~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (138)
                      .+...+.+++|+.+|+.++||||+++++.+. +.+.+++||||+. ++|.+++.....                      
T Consensus        39 ~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~-~~~~~~lv~e~~~~~~l~~~~~~~~~----------------------   95 (327)
T cd08227          39 TNEMVTFLQGELHVSKLFNHPNIVPYRATFI-ADNELWVVTSFMAYGSAKDLICTHFM----------------------   95 (327)
T ss_pred             cHHHHHHHHHHHHHHHhcCCCCeeeEEEEEE-ECCEEEEEEeccCCCcHHHHHHhhcc----------------------
Confidence            3556788999999999999999999999776 4678999999995 799999974321                      


Q ss_pred             CCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          90 QSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        90 ~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                 ..+++.+++.++.||+.|| +|||+..    .+.|++|.+
T Consensus        96 -----------~~l~~~~~~~i~~qi~~~L-~~LH~~~iiH~dlkp~Nil~  134 (327)
T cd08227          96 -----------DGMSELAIAYILQGVLKAL-DYIHHMGYVHRSVKASHILI  134 (327)
T ss_pred             -----------CCCCHHHHHHHHHHHHHHH-HHHHHCCEecCCCChhhEEE
Confidence                       1488899999999999999 9999754    345887764

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>KOG0588|consensus

Probab=99.34  E-value=2.1e-12  Score=117.87  Aligned_cols=88  Identities=15%  Similarity=0.122  Sum_probs=75.2

Q ss_pred             cchHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccc-cccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          10 RKETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPV-YASLASILAFQESPAPNHSTNPVTGGSGSSPPPA   88 (138)
Q Consensus        10 ~~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V-~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (138)
                      ..+....-+.|||-+|+-|.|||||++|++.+ ++..||+|.||| .|.|+++|..++                      
T Consensus        51 ~s~s~~~~IerEIviMkLi~HpnVl~LydVwe-~~~~lylvlEyv~gGELFdylv~kG----------------------  107 (786)
T KOG0588|consen   51 LSSSQPAGIEREIVIMKLIEHPNVLRLYDVWE-NKQHLYLVLEYVPGGELFDYLVRKG----------------------  107 (786)
T ss_pred             cccccccchhhhhHHHHHhcCCCeeeeeeeec-cCceEEEEEEecCCchhHHHHHhhC----------------------
Confidence            44566778899999999999999999999665 688999999999 589999998765                      


Q ss_pred             CCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcc
Q psy3822          89 NQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSV  134 (138)
Q Consensus        89 ~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~  134 (138)
                                   +|.|.|+.++|.||+.|+ .|||...    .+.|.++
T Consensus       108 -------------~l~e~eaa~ff~QIi~gv-~yCH~~~icHRDLKpENl  143 (786)
T KOG0588|consen  108 -------------PLPEREAAHFFRQILDGV-SYCHAFNICHRDLKPENL  143 (786)
T ss_pred             -------------CCCCHHHHHHHHHHHHHH-HHHhhhcceeccCCchhh
Confidence                         689999999999999999 9999744    4555443

>KOG0589|consensus

Probab=99.34  E-value=2.7e-12  Score=112.17  Aligned_cols=78  Identities=21%  Similarity=0.145  Sum_probs=68.7

Q ss_pred             HHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          16 EILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASR   94 (138)
Q Consensus        16 e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (138)
                      +...+|+.++++|+|||||.+++.+++....+++|||||. |+|++.+.++.                            
T Consensus        48 ~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm~Y~eGg~l~~~i~~~k----------------------------   99 (426)
T KOG0589|consen   48 RSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVMEYCEGGDLAQLIKEQK----------------------------   99 (426)
T ss_pred             HHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEEeecCCCCHHHHHHHHh----------------------------
Confidence            4678999999999999999999999986656999999995 79999998653                            


Q ss_pred             CcccccCCccHHHHHHHHHHHHHHHHhhhcCCC
Q psy3822          95 PTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS  127 (138)
Q Consensus        95 ~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a  127 (138)
                           +..|+|..|..|+.|++.|+ +|||++.
T Consensus       100 -----~~~f~E~~i~~~~~Q~~~av-~ylH~~~  126 (426)
T KOG0589|consen  100 -----GVLFPEERILKWFVQILLAV-NYLHENR  126 (426)
T ss_pred             -----hccccHHHHHHHHHHHHHHH-HHHHhhh
Confidence                 23799999999999999999 9999543

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.33  E-value=8.6e-12  Score=97.65  Aligned_cols=88  Identities=16%  Similarity=0.111  Sum_probs=72.4

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      ...+.+.+|+..|.+++||||+++++.+. .++.+++||||+. ++|.+++....                         
T Consensus        48 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~-------------------------  101 (266)
T cd05064          48 KQRRGFLAEALTLGQFDHSNIVRLEGVIT-RGNTMMIVTEYMSNGALDSFLRKHE-------------------------  101 (266)
T ss_pred             HHHHHHHHHHHHHhcCCCCCcCeEEEEEe-cCCCcEEEEEeCCCCcHHHHHHhCC-------------------------
Confidence            44567889999999999999999999776 4678999999996 69999987432                         


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                               ..+++.++..++.||++|| +|||+..    .+.|+++..
T Consensus       102 ---------~~l~~~~~~~~~~~i~~al-~~lH~~~iiH~dikp~nili  140 (266)
T cd05064         102 ---------GQLVAGQLMGMLPGLASGM-KYLSEMGYVHKGLAAHKVLV  140 (266)
T ss_pred             ---------CCCCHHHHHHHHHHHHHHH-HHHHHCCEeeccccHhhEEE
Confidence                     1578899999999999999 9999865    344777654

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.33  E-value=6.1e-12  Score=103.03  Aligned_cols=87  Identities=11%  Similarity=0.137  Sum_probs=74.0

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      ...+.+++|+.+|.+++||||+++++.++ +.+.+|+||||+. ++|.+++....                         
T Consensus        43 ~~~~~~~~E~~il~~l~h~~iv~~~~~~~-~~~~~~lv~E~~~~g~L~~~l~~~~-------------------------   96 (364)
T cd05599          43 EQVAHVRAERDILAEADNPWVVKLYYSFQ-DENYLYLIMEYLPGGDMMTLLMKKD-------------------------   96 (364)
T ss_pred             hHHHHHHHHHHHHHhCCCCCCcceEEEEE-cCCeEEEEECCCCCcHHHHHHHHcC-------------------------
Confidence            44567899999999999999999999776 4789999999995 69999987432                         


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                .|+|.+++.++.||+.|| +|||+..    .+.|++|.+
T Consensus        97 ----------~l~~~~~~~~~~qi~~aL-~~lH~~~ivH~Dlkp~NIl~  134 (364)
T cd05599          97 ----------TFTEEETRFYIAETILAI-DSIHKLGYIHRDIKPDNLLL  134 (364)
T ss_pred             ----------CCCHHHHHHHHHHHHHHH-HHHHHCCeEeccCCHHHeEE
Confidence                      589999999999999999 9999865    445887765

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.33  E-value=5.7e-12  Score=100.62  Aligned_cols=85  Identities=14%  Similarity=0.092  Sum_probs=71.4

Q ss_pred             HHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          16 EILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASRP   95 (138)
Q Consensus        16 e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   95 (138)
                      ..+.+|+.+|++|+||||+++++.++ +.+.+++||||+.++|.+.+....                             
T Consensus        48 ~~~~~E~~~l~~l~h~niv~~~~~~~-~~~~~~lv~e~~~~~l~~~~~~~~-----------------------------   97 (303)
T cd07869          48 FTAIREASLLKGLKHANIVLLHDIIH-TKETLTLVFEYVHTDLCQYMDKHP-----------------------------   97 (303)
T ss_pred             hhHHHHHHHHhhCCCCCcCeEEEEEe-cCCeEEEEEECCCcCHHHHHHhCC-----------------------------
Confidence            45678999999999999999999776 467899999999999988886432                             


Q ss_pred             cccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          96 THAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        96 ~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                           ..+++.+++.++.||+.|| +|||+..    .+.|++|.+
T Consensus        98 -----~~~~~~~~~~~~~qi~~al-~~lH~~~ivH~dlkp~Nill  136 (303)
T cd07869          98 -----GGLHPENVKLFLFQLLRGL-SYIHQRYILHRDLKPQNLLI  136 (303)
T ss_pred             -----CCCCHHHHHHHHHHHHHHH-HHHHHCCeecCCCCHHHEEE
Confidence                 1578889999999999999 9999865    445777764

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>KOG0198|consensus

Probab=99.33  E-value=6.3e-12  Score=106.02  Aligned_cols=84  Identities=15%  Similarity=0.190  Sum_probs=69.6

Q ss_pred             HHHHHHHHHHhhhCCCCCeeEEeceeeecCC--eEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVYRHPKILSVLHPIEECPD--ALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        15 ~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~--~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      .+.|.+|+++|.+|+|||||++++... ++.  .+++.|||+. |||++++...+                         
T Consensus        58 ~~~l~~Ei~iL~~l~~p~IV~~~G~~~-~~~~~~~~i~mEy~~~GsL~~~~~~~g-------------------------  111 (313)
T KOG0198|consen   58 SESLEREIRILSRLNHPNIVQYYGSSS-SRENDEYNIFMEYAPGGSLSDLIKRYG-------------------------  111 (313)
T ss_pred             HHHHHHHHHHHHhCCCCCEEeeCCccc-cccCeeeEeeeeccCCCcHHHHHHHcC-------------------------
Confidence            788999999999999999999999422 233  6999999995 79999998543                         


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcc
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSV  134 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~  134 (138)
                              + .|+|..|+.+..||++|| .|||+..    .+.|++|
T Consensus       112 --------~-~l~E~~v~~ytr~iL~GL-~ylHs~g~vH~DiK~~Ni  148 (313)
T KOG0198|consen  112 --------G-KLPEPLVRRYTRQILEGL-AYLHSKGIVHCDIKPANI  148 (313)
T ss_pred             --------C-CCCHHHHHHHHHHHHHHH-HHHHhCCEeccCcccceE
Confidence                    1 599999999999999999 9999543    3446554

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.33  E-value=4.6e-12  Score=102.20  Aligned_cols=85  Identities=14%  Similarity=0.165  Sum_probs=71.2

Q ss_pred             HHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSAS   93 (138)
Q Consensus        15 ~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (138)
                      ...+.+|+.+|.+|+||||+++++.++ +.+.+|+||||+. ++|.+.+....                           
T Consensus        42 ~~~~~~E~~~l~~l~h~niv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~---------------------------   93 (318)
T cd05582          42 RVRTKMERDILAEVNHPFIVKLHYAFQ-TEGKLYLILDFLRGGDLFTRLSKEV---------------------------   93 (318)
T ss_pred             HHHHHHHHHHHHhCCCCCcccEEEEEE-cCCEEEEEEcCCCCCcHHHHHHHcC---------------------------
Confidence            345678999999999999999999776 4679999999995 79999886422                           


Q ss_pred             CCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          94 RPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        94 ~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                              .+++.+++.++.||++|| .|||+..    .+.|++|.+
T Consensus        94 --------~l~~~~~~~~~~qi~~~l-~~lH~~~i~H~dlkp~Nil~  131 (318)
T cd05582          94 --------MFTEEDVKFYLAELALAL-DHLHSLGIIYRDLKPENILL  131 (318)
T ss_pred             --------CCCHHHHHHHHHHHHHHH-HHHHHCCEecCCCCHHHeEE
Confidence                    588999999999999999 9999864    345777765

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.33  E-value=8.7e-12  Score=97.42  Aligned_cols=91  Identities=14%  Similarity=0.081  Sum_probs=74.1

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      +...+.+++|+.+|.+++||||+++++.+++ .+.+++||||+.++|.+.+.....                        
T Consensus        40 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~~v~e~~~~~l~~~~~~~~~------------------------   94 (285)
T cd07861          40 EGVPSTAIREISLLKELQHPNIVCLQDVLMQ-ESRLYLIFEFLSMDLKKYLDSLPK------------------------   94 (285)
T ss_pred             CCchHHHHHHHHHHHhcCCCCEeeeEEEEee-CCeEEEEEecCCCCHHHHHhcCCC------------------------
Confidence            3445778899999999999999999998774 678999999998899888864321                        


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                              ...+++.+++.++.||++|| .|||+..    .+-|++|.+
T Consensus        95 --------~~~~~~~~~~~~~~qi~~~L-~~lH~~~i~H~dl~p~nil~  134 (285)
T cd07861          95 --------GQYMDAELVKSYLYQILQGI-LFCHSRRVLHRDLKPQNLLI  134 (285)
T ss_pred             --------CCcCCHHHHHHHHHHHHHHH-HHHHhCCeeecCCCHHHEEE
Confidence                    12589999999999999999 9999864    334777654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.32  E-value=1.2e-11  Score=100.75  Aligned_cols=89  Identities=15%  Similarity=0.139  Sum_probs=74.6

Q ss_pred             chHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          11 KETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPAN   89 (138)
Q Consensus        11 ~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (138)
                      .+...+.+.+|+.+|++++||||+++++.+.+ .+.+++||||+. ++|.+++....                       
T Consensus        43 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~-----------------------   98 (331)
T cd06649          43 KPAIRNQIIRELQVLHECNSPYIVGFYGAFYS-DGEISICMEHMDGGSLDQVLKEAK-----------------------   98 (331)
T ss_pred             CHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEE-CCEEEEEeecCCCCcHHHHHHHcC-----------------------
Confidence            34566789999999999999999999997764 678999999996 69999997432                       


Q ss_pred             CCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC-----CcccCccee
Q psy3822          90 QSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS-----TYLPSSVAF  136 (138)
Q Consensus        90 ~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a-----~~~~~~~~~  136 (138)
                                  .+++..++.++.||+.|| .|||+..     .+.|++|.+
T Consensus        99 ------------~~~~~~~~~~~~~i~~~l-~~lH~~~~ivH~dlkp~Nil~  137 (331)
T cd06649          99 ------------RIPEEILGKVSIAVLRGL-AYLREKHQIMHRDVKPSNILV  137 (331)
T ss_pred             ------------CCCHHHHHHHHHHHHHHH-HHHhhcCCEEcCCCChhhEEE
Confidence                        478899999999999999 9999754     345888765

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.32  E-value=8.6e-12  Score=103.19  Aligned_cols=87  Identities=11%  Similarity=0.082  Sum_probs=73.8

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      ...+.+++|+.+|++++||||+++++.++ +.+.+|+||||+. ++|.+++....                         
T Consensus        43 ~~~~~~~~E~~il~~l~hp~iv~~~~~~~-~~~~~~lv~E~~~gg~L~~~l~~~~-------------------------   96 (377)
T cd05629          43 DQLAHVKAERDVLAESDSPWVVSLYYSFQ-DAQYLYLIMEFLPGGDLMTMLIKYD-------------------------   96 (377)
T ss_pred             HHHHHHHHHHHHHHhCCCCCcceEEEEEE-cCCeeEEEEeCCCCCcHHHHHHhcC-------------------------
Confidence            34677899999999999999999999876 4678999999995 79999987432                         


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                .+++..++.++.||+.|| +|||+..    .+.|++|.+
T Consensus        97 ----------~~~~~~~~~~~~ql~~aL-~~LH~~givHrDlkp~NIll  134 (377)
T cd05629          97 ----------TFSEDVTRFYMAECVLAI-EAVHKLGFIHRDIKPDNILI  134 (377)
T ss_pred             ----------CCCHHHHHHHHHHHHHHH-HHHHhCCeeccCCCHHHEEE
Confidence                      588899999999999999 9999865    445888765

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.32  E-value=7.9e-12  Score=101.86  Aligned_cols=86  Identities=17%  Similarity=0.181  Sum_probs=72.3

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ..+.+.+|+.+|.+|+||||+++++.+++ .+.+|+||||+. ++|.+.+....                          
T Consensus        61 ~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~--------------------------  113 (329)
T PTZ00263         61 QVQHVAQEKSILMELSHPFIVNMMCSFQD-ENRVYFLLEFVVGGELFTHLRKAG--------------------------  113 (329)
T ss_pred             hHHHHHHHHHHHHhCCCCCCCcEEEEEEc-CCEEEEEEcCCCCChHHHHHHHcC--------------------------
Confidence            45678999999999999999999998774 679999999995 69999987432                          


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                               .+++..++.++.||+.|| +|||+..    .+.|++|.+
T Consensus       114 ---------~~~~~~~~~~~~qi~~aL-~~LH~~~ivH~dlkp~NIll  151 (329)
T PTZ00263        114 ---------RFPNDVAKFYHAELVLAF-EYLHSKDIIYRDLKPENLLL  151 (329)
T ss_pred             ---------CCCHHHHHHHHHHHHHHH-HHHHHCCeeecCCCHHHEEE
Confidence                     578889999999999999 9999864    445777654

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.32  E-value=8.7e-12  Score=96.38  Aligned_cols=88  Identities=20%  Similarity=0.221  Sum_probs=73.5

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      +...+.+++|++.|++|+||||+++++.+++ .+.+++|+||+. ++|.+++....                        
T Consensus        44 ~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~~v~e~~~~~~L~~~l~~~~------------------------   98 (268)
T cd06630          44 EEVVEALRKEIRLMARLNHPHIIRMLGATCE-DSHFNLFVEWMAGGSVSHLLSKYG------------------------   98 (268)
T ss_pred             HHHHHHHHHHHHHHHHcCCCceehhhceecc-CCeEEEEEeccCCCcHHHHHHHhC------------------------
Confidence            3467889999999999999999999997764 678999999996 69999997432                        


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                 .+++..+..++.||+.|| .|||+..    .+-|+++.+
T Consensus        99 -----------~~~~~~~~~~~~ql~~al-~~LH~~~i~H~~i~~~nil~  136 (268)
T cd06630          99 -----------AFKEAVIINYTEQLLRGL-SYLHENQIIHRDVKGANLLI  136 (268)
T ss_pred             -----------CCCHHHHHHHHHHHHHHH-HHHHhCCeecCCCCHHHEEE
Confidence                       578899999999999999 9999864    233666655

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.31  E-value=1.9e-11  Score=94.17  Aligned_cols=90  Identities=13%  Similarity=0.143  Sum_probs=74.2

Q ss_pred             chHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          11 KETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPAN   89 (138)
Q Consensus        11 ~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (138)
                      .+...+.+++|+.+|++|+||||+++++.+. ..+.+++||||+. ++|.+++....                       
T Consensus        33 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~-----------------------   88 (252)
T cd05084          33 PPDLKAKFLQEARILKQYSHPNIVRLIGVCT-QKQPIYIVMELVQGGDFLTFLRTEG-----------------------   88 (252)
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCCeEEEEeeccCCcHHHHHHhCC-----------------------
Confidence            3455677899999999999999999999776 4678999999995 69999986422                       


Q ss_pred             CCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          90 QSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        90 ~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                 ..+++.++..++.||++|| .|||+..    .+.|++|.+
T Consensus        89 -----------~~~~~~~~~~~~~qi~~~L-~~lH~~~i~H~dl~p~nil~  127 (252)
T cd05084          89 -----------PRLKVKELIQMVENAAAGM-EYLESKHCIHRDLAARNCLV  127 (252)
T ss_pred             -----------CCCCHHHHHHHHHHHHHHH-HHHHhCCccccccchheEEE
Confidence                       1478889999999999999 9999765    445888765

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.31  E-value=1.3e-11  Score=96.94  Aligned_cols=86  Identities=20%  Similarity=0.167  Sum_probs=68.9

Q ss_pred             CCCcchHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCC
Q psy3822           7 KPKRKETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSP   85 (138)
Q Consensus         7 K~~~~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~   85 (138)
                      ++...+...+.+.+|++.|.+++||||+++++... ..+.+++||||+. ++|.++|.....                  
T Consensus        37 ~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~-~~~~~~lv~e~~~~g~L~~~L~~~~~------------------   97 (259)
T PF07714_consen   37 KPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCI-ENEPLFLVMEYCPGGSLDDYLKSKNK------------------   97 (259)
T ss_dssp             STTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEE-SSSSEEEEEE--TTEBHHHHHHHTCT------------------
T ss_pred             ccccccccceeeeeccccccccccccccccccccc-cccccccccccccccccccccccccc------------------
Confidence            43444555788899999999999999999999776 3556999999995 799999986521                  


Q ss_pred             CCCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC
Q psy3822          86 PPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS  127 (138)
Q Consensus        86 ~~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a  127 (138)
                                     ..+++..+..++.||++|| .|||+..
T Consensus        98 ---------------~~~~~~~~~~i~~~i~~~l-~~Lh~~~  123 (259)
T PF07714_consen   98 ---------------EPLSEQQRLSIAIQIAEAL-SYLHSNN  123 (259)
T ss_dssp             ---------------TTSBHHHHHHHHHHHHHHH-HHHHHTT
T ss_pred             ---------------ccccccccccccccccccc-ccccccc
Confidence                           2588899999999999999 9999864

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.31  E-value=1.5e-11  Score=98.80  Aligned_cols=89  Identities=17%  Similarity=0.143  Sum_probs=73.7

Q ss_pred             chHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          11 KETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPAN   89 (138)
Q Consensus        11 ~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (138)
                      ++...+.+.+|+++|.+++||||+++++.+.+ .+.+++||||+. ++|.+++....                       
T Consensus        39 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~ey~~~~~L~~~l~~~~-----------------------   94 (308)
T cd06615          39 KPAIRNQIIRELKVLHECNSPYIVGFYGAFYS-DGEISICMEHMDGGSLDQVLKKAG-----------------------   94 (308)
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEee-CCEEEEEeeccCCCcHHHHHHhcC-----------------------
Confidence            44566778899999999999999999998764 679999999996 69999997432                       


Q ss_pred             CCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCCC-----cccCccee
Q psy3822          90 QSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPST-----YLPSSVAF  136 (138)
Q Consensus        90 ~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a~-----~~~~~~~~  136 (138)
                                  .+++..++.++.||++|| .|||+..+     +-|++|..
T Consensus        95 ------------~~~~~~~~~~~~~i~~~l-~~lH~~~~i~H~dl~p~nil~  133 (308)
T cd06615          95 ------------RIPENILGKISIAVLRGL-TYLREKHKIMHRDVKPSNILV  133 (308)
T ss_pred             ------------CCCHHHHHHHHHHHHHHH-HHHHhhCCEEECCCChHHEEE
Confidence                        578889999999999999 99997433     34666654

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.31  E-value=1.5e-11  Score=100.64  Aligned_cols=89  Identities=16%  Similarity=0.146  Sum_probs=74.1

Q ss_pred             chHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          11 KETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPAN   89 (138)
Q Consensus        11 ~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (138)
                      .+...+.+.+|+++|++|+||||+++++.+++ .+.+++||||+. ++|.+++....                       
T Consensus        43 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~-----------------------   98 (333)
T cd06650          43 KPAIRNQIIRELQVLHECNSPYIVGFYGAFYS-DGEISICMEHMDGGSLDQVLKKAG-----------------------   98 (333)
T ss_pred             CHHHHHHHHHHHHHHHHCCCCcccceeEEEEE-CCEEEEEEecCCCCcHHHHHHHcC-----------------------
Confidence            34556778999999999999999999998775 679999999995 69999997432                       


Q ss_pred             CCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC-----CcccCccee
Q psy3822          90 QSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS-----TYLPSSVAF  136 (138)
Q Consensus        90 ~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a-----~~~~~~~~~  136 (138)
                                  .+++..++.++.||++|| .|||+..     .+.|++|.+
T Consensus        99 ------------~~~~~~~~~~~~~l~~~l-~~lH~~~~ivH~dlkp~Nili  137 (333)
T cd06650          99 ------------RIPEQILGKVSIAVIKGL-TYLREKHKIMHRDVKPSNILV  137 (333)
T ss_pred             ------------CCCHHHHHHHHHHHHHHH-HHHHhcCCEEecCCChhhEEE
Confidence                        477889999999999999 9999754     345777765

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.31  E-value=1.1e-11  Score=102.26  Aligned_cols=86  Identities=10%  Similarity=0.127  Sum_probs=72.6

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ..+.+++|+.+|.+|+||||+++++.+++ .+.+++||||+. ++|.+++....                          
T Consensus        44 ~~~~~~~E~~il~~l~h~~iv~~~~~~~~-~~~~~lv~E~~~~g~L~~~i~~~~--------------------------   96 (376)
T cd05598          44 QAAHVKAERDILAEADNEWVVKLYYSFQD-KDNLYFVMDYIPGGDMMSLLIRLG--------------------------   96 (376)
T ss_pred             hHHHHHHHHHHHHhCCCCCcceEEEEEEc-CCEEEEEEeCCCCCcHHHHHHhcC--------------------------
Confidence            35678899999999999999999997764 679999999995 79999997432                          


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                               .+++..++.++.||+.|| +|||+..    .+.|++|.+
T Consensus        97 ---------~~~~~~~~~~~~qi~~al-~~lH~~~ivHrDlkp~Nill  134 (376)
T cd05598          97 ---------IFEEDLARFYIAELTCAI-ESVHKMGFIHRDIKPDNILI  134 (376)
T ss_pred             ---------CCCHHHHHHHHHHHHHHH-HHHHHCCeEeCCCCHHHEEE
Confidence                     578889999999999999 9999854    445777764

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.30  E-value=6.5e-12  Score=100.15  Aligned_cols=86  Identities=16%  Similarity=0.142  Sum_probs=72.4

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ..+.+++|+.+|++|+||||+++++.++ +.+.+++||||+. ++|.+++....                          
T Consensus        44 ~~~~~~~E~~~l~~l~hp~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~--------------------------   96 (291)
T cd05612          44 QEQHVHNEKRVLKEVSHPFIIRLFWTEH-DQRFLYMLMEYVPGGELFSYLRNSG--------------------------   96 (291)
T ss_pred             HHHHHHHHHHHHHhCCCCcHhhhHhhhc-cCCeEEEEEeCCCCCCHHHHHHHcC--------------------------
Confidence            4567899999999999999999999776 4679999999995 79999997432                          


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                               .+++.++..++.||+.|| +|||+..    .+.|++|.+
T Consensus        97 ---------~~~~~~~~~~~~qi~~~l-~~lH~~~i~H~dlkp~NIli  134 (291)
T cd05612          97 ---------RFSNSTGLFYASEIVCAL-EYLHSKEIVYRDLKPENILL  134 (291)
T ss_pred             ---------CCCHHHHHHHHHHHHHHH-HHHHHCCeeecCCCHHHeEE
Confidence                     578889999999999999 9999865    445777765

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.30  E-value=1.5e-11  Score=102.23  Aligned_cols=87  Identities=11%  Similarity=0.165  Sum_probs=73.8

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      ...+.+++|+.+|++++||||+++++.+++ .+.+|+||||+. ++|.+++....                         
T Consensus        43 ~~~~~~~~E~~il~~l~h~~iv~l~~~~~~-~~~~~lv~E~~~gg~L~~~l~~~~-------------------------   96 (381)
T cd05626          43 NQVAHVKAERDILAEADNEWVVKLYYSFQD-KDNLYFVMDYIPGGDMMSLLIRME-------------------------   96 (381)
T ss_pred             HHHHHHHHHHHHHHhcCCCCeeeeEEEEec-CCEEEEEEecCCCCcHHHHHHhcC-------------------------
Confidence            456778999999999999999999998874 679999999995 69999997432                         


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                .++|..++.++.||+.|| +|||+..    .+.|++|.+
T Consensus        97 ----------~~~e~~~~~~~~qi~~aL-~~LH~~givHrDlKp~Nili  134 (381)
T cd05626          97 ----------VFPEVLARFYIAELTLAI-ESVHKMGFIHRDIKPDNILI  134 (381)
T ss_pred             ----------CCCHHHHHHHHHHHHHHH-HHHHhCCeeecCCcHHHEEE
Confidence                      588899999999999999 9999865    345777764

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.30  E-value=1.3e-11  Score=100.10  Aligned_cols=86  Identities=17%  Similarity=0.141  Sum_probs=72.2

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ....+.+|+.+|++++||||+++++.++ +.+.+|+||||+. ++|.+.+....                          
T Consensus        38 ~~~~~~~e~~~l~~l~hp~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~--------------------------   90 (323)
T cd05571          38 EVAHTLTESRVLQNTRHPFLTALKYSFQ-THDRLCFVMEYANGGELFFHLSRER--------------------------   90 (323)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCEEEEEE-cCCEEEEEEeCCCCCcHHHHHHHcC--------------------------
Confidence            3456789999999999999999999776 4779999999995 69998887432                          


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                               .+++.+++.++.||+.|| +|||+..    .+.|++|.+
T Consensus        91 ---------~~~~~~~~~~~~qi~~~L-~~lH~~~ivHrDlkp~NIll  128 (323)
T cd05571          91 ---------VFSEDRARFYGAEIVSAL-GYLHSCDVVYRDLKLENLML  128 (323)
T ss_pred             ---------CCCHHHHHHHHHHHHHHH-HHHHhCCeEeCCCCHHHEEE
Confidence                     588999999999999999 9999865    445887765

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>KOG0585|consensus

Probab=99.30  E-value=3.7e-12  Score=113.00  Aligned_cols=85  Identities=15%  Similarity=0.197  Sum_probs=66.3

Q ss_pred             HHHHHHHHHHhhhCCCCCeeEEeceeeecC-CeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVYRHPKILSVLHPIEECP-DALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        15 ~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~-~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ++.+++||.+|+||+|||||+|+|.+.+-. +.+|+|+|||. |.+   .-..+.                         
T Consensus       152 ~ekv~~EIailKkl~H~nVV~LiEvLDDP~s~~~YlVley~s~G~v---~w~p~d-------------------------  203 (576)
T KOG0585|consen  152 IEKVRREIAILKKLHHPNVVKLIEVLDDPESDKLYLVLEYCSKGEV---KWCPPD-------------------------  203 (576)
T ss_pred             HHHHHHHHHHHHhcCCcCeeEEEEeecCcccCceEEEEEeccCCcc---ccCCCC-------------------------
Confidence            478999999999999999999999886532 58999999985 433   221110                         


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcce
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVA  135 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~  135 (138)
                             ...|+|.++++++.+++.|| +|||...    ...||++.
T Consensus       204 -------~~els~~~Ar~ylrDvv~GL-EYLH~QgiiHRDIKPsNLL  242 (576)
T KOG0585|consen  204 -------KPELSEQQARKYLRDVVLGL-EYLHYQGIIHRDIKPSNLL  242 (576)
T ss_pred             -------cccccHHHHHHHHHHHHHHH-HHHHhcCeeccccchhheE
Confidence                   01399999999999999999 9999865    44577653

>KOG1243|consensus

Probab=99.30  E-value=3.8e-12  Score=115.91  Aligned_cols=81  Identities=32%  Similarity=0.440  Sum_probs=72.4

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      +.++.+++-++.|+.||||||+++++..++ .+++|+|||+|. .|..+|+                             
T Consensus        51 ~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~-~~~~ylvTErV~-Pl~~~lk-----------------------------   99 (690)
T KOG1243|consen   51 EVTELAKRAVKRLKTLRHPNILSYLDTTEE-EGTLYLVTERVR-PLETVLK-----------------------------   99 (690)
T ss_pred             hhhHHHHHHHHHhhhccCchhhhhhhhhcc-cCceEEEeeccc-cHHHHHH-----------------------------
Confidence            678899999999999999999999998875 669999999997 5777787                             


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCCCcccCcc
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPSTYLPSSV  134 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a~~~~~~~  134 (138)
                               .+.+.++.+|+.||+.|| .|||+++++++.+|
T Consensus       100 ---------~l~~~~v~~Gl~qIl~AL-~FL~~d~~lvHgNv  131 (690)
T KOG1243|consen  100 ---------ELGKEEVCLGLFQILAAL-SFLNDDCNLVHGNV  131 (690)
T ss_pred             ---------HhHHHHHHHHHHHHHHHH-HHHhccCCeeeccE
Confidence                     355789999999999999 99999999998765

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.30  E-value=1.9e-11  Score=99.13  Aligned_cols=86  Identities=17%  Similarity=0.149  Sum_probs=71.6

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ....+.+|+.+|.+++||||+++++.++ +.+.+|+||||+. ++|.+.+....                          
T Consensus        38 ~~~~~~~e~~~l~~~~hp~i~~~~~~~~-~~~~~~lv~E~~~~~~L~~~l~~~~--------------------------   90 (325)
T cd05594          38 EVAHTLTENRVLQNSRHPFLTALKYSFQ-THDRLCFVMEYANGGELFFHLSRER--------------------------   90 (325)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCceEEEEE-cCCEEEEEEeCCCCCcHHHHHHhcC--------------------------
Confidence            3456688999999999999999999776 4679999999995 69988886432                          


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC-----CcccCccee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS-----TYLPSSVAF  136 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a-----~~~~~~~~~  136 (138)
                               .+++.+++.++.||+.|| +|||+..     .+.|++|.+
T Consensus        91 ---------~l~~~~~~~~~~qi~~aL-~~lH~~~~ivHrDikp~NIll  129 (325)
T cd05594          91 ---------VFSEDRARFYGAEIVSAL-DYLHSEKNVVYRDLKLENLML  129 (325)
T ss_pred             ---------CCCHHHHHHHHHHHHHHH-HHHHhcCCEEecCCCCCeEEE
Confidence                     588899999999999999 9999743     345888865

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>KOG0586|consensus

Probab=99.30  E-value=7.7e-12  Score=112.54  Aligned_cols=85  Identities=19%  Similarity=0.198  Sum_probs=72.0

Q ss_pred             CCCCcchHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccc-cccHHHHHhhcCCCCCCCCCCCCCCCCCCC
Q psy3822           6 HKPKRKETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPV-YASLASILAFQESPAPNHSTNPVTGGSGSS   84 (138)
Q Consensus         6 ~K~~~~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V-~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~   84 (138)
                      +|......-++-+.||+++|+.|.|||||++++.++ +.+.||+||||+ .+.++++|.+.+                  
T Consensus        90 dkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~-t~~~lylV~eya~~ge~~~yl~~~g------------------  150 (596)
T KOG0586|consen   90 DKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIE-TEATLYLVMEYASGGELFDYLVKHG------------------  150 (596)
T ss_pred             hhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeee-ecceeEEEEEeccCchhHHHHHhcc------------------
Confidence            444444445566899999999999999999999776 688999999999 479999999765                  


Q ss_pred             CCCCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC
Q psy3822          85 PPPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS  127 (138)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a  127 (138)
                                       ++.|.+++..+.|++.|+ +|||+..
T Consensus       151 -----------------r~~e~~ar~~F~q~vsav-eYcH~k~  175 (596)
T KOG0586|consen  151 -----------------RMKEKEARAKFRQIVSAV-EYCHSKN  175 (596)
T ss_pred             -----------------cchhhhhhhhhHHHHHHH-HHHhhcc
Confidence                             466789999999999999 9999865

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.29  E-value=1.6e-11  Score=99.89  Aligned_cols=86  Identities=17%  Similarity=0.158  Sum_probs=72.0

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ....+.+|+..|++++||||+++++.++ +.+.+|+||||+. ++|...+....                          
T Consensus        38 ~~~~~~~E~~~l~~l~hp~i~~~~~~~~-~~~~~~lv~E~~~~~~L~~~l~~~~--------------------------   90 (323)
T cd05595          38 EVAHTVTESRVLQNTRHPFLTALKYAFQ-THDRLCFVMEYANGGELFFHLSRER--------------------------   90 (323)
T ss_pred             HHHHHHHHHHHHHhCCCCCCcceeeEEe-cCCEEEEEEeCCCCCcHHHHHHHcC--------------------------
Confidence            4456678999999999999999999776 4679999999995 69988886432                          


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                               .+++.+++.++.||++|| +|||+..    .+.|++|.+
T Consensus        91 ---------~~~~~~~~~~~~qi~~aL-~~LH~~~ivH~Dlkp~NIll  128 (323)
T cd05595          91 ---------VFTEERARFYGAEIVSAL-EYLHSRDVVYRDIKLENLML  128 (323)
T ss_pred             ---------CCCHHHHHHHHHHHHHHH-HHHHHCCeEecCCCHHHEEE
Confidence                     588999999999999999 9999864    445887765

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.29  E-value=1.1e-11  Score=97.42  Aligned_cols=90  Identities=13%  Similarity=0.109  Sum_probs=71.8

Q ss_pred             chHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          11 KETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        11 ~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      .+...+.+++|+..|.+++||||+++++.+++ .+.+++||||+.+.+.+.+....                        
T Consensus        40 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~~~~~~l~~~~~~~------------------------   94 (287)
T cd07848          40 NEEVKETTLRELKMLRTLKQENIVELKEAFRR-RGKLYLVFEYVEKNMLELLEEMP------------------------   94 (287)
T ss_pred             cccchhhHHHHHHHHHhCCCccccchhhhEec-CCEEEEEEecCCCCHHHHHHhcC------------------------
Confidence            34556788999999999999999999998864 67999999999876655554321                        


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                ..+++..++.++.||+.|| .|||+..    .+.|++|.+
T Consensus        95 ----------~~~~~~~~~~~~~qi~~~L-~~lH~~~i~H~dlkp~Nill  133 (287)
T cd07848          95 ----------NGVPPEKVRSYIYQLIKAI-HWCHKNDIVHRDIKPENLLI  133 (287)
T ss_pred             ----------CCCCHHHHHHHHHHHHHHH-HHHHHCCeecCCCCHHHEEE
Confidence                      1588889999999999999 9999754    344777654

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.29  E-value=2.9e-11  Score=93.12  Aligned_cols=91  Identities=14%  Similarity=0.155  Sum_probs=75.0

Q ss_pred             chHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          11 KETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPAN   89 (138)
Q Consensus        11 ~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (138)
                      .+...+.+.+|+.+|++++||||+++++.+++ .+.++++|||+. ++|.+.+....                       
T Consensus        39 ~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~~~~~e~~~~~~L~~~~~~~~-----------------------   94 (256)
T cd08221          39 SEKERRDALNEIVILSLLQHPNIIAYYNHFMD-DNTLLIEMEYANGGTLYDKIVRQK-----------------------   94 (256)
T ss_pred             chhHHHHHHHHHHHHHhCCCCCeeEEEeEEec-CCeEEEEEEecCCCcHHHHHHhcc-----------------------
Confidence            34455677899999999999999999998875 678999999995 69999997432                       


Q ss_pred             CCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          90 QSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        90 ~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                ...+++.++..++.|+++|| .|||+..    .+-|++|.+
T Consensus        95 ----------~~~~~~~~~~~~~~~l~~~l-~~lh~~~i~h~dl~p~ni~~  134 (256)
T cd08221          95 ----------GQLFEEEMVLWYLFQIVSAV-SYIHKAGILHRDIKTLNIFL  134 (256)
T ss_pred             ----------ccCCCHHHHHHHHHHHHHHH-HHHHhCCccccCCChHhEEE
Confidence                      12588899999999999999 9999743    445888765

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.29  E-value=2.1e-11  Score=98.37  Aligned_cols=86  Identities=13%  Similarity=0.081  Sum_probs=72.3

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ..+.+.+|+.+|.+++||||+++++.++ +.+.+|+||||+. ++|.+.+....                          
T Consensus        36 ~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~~g~L~~~l~~~~--------------------------   88 (312)
T cd05585          36 EVTHTLAERTVLAQVNCPFIVPLKFSFQ-SPEKLYLVLAFINGGELFHHLQREG--------------------------   88 (312)
T ss_pred             HHHHHHHHHHHHHhCCCCcEeceeeEEe-cCCeEEEEEcCCCCCcHHHHHHhcC--------------------------
Confidence            4566789999999999999999999776 4679999999995 69999987432                          


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                               .+++.+++.++.||++|| +|||+..    .+.|++|.+
T Consensus        89 ---------~~~~~~~~~~~~qi~~~l-~~lH~~~i~HrDlkp~Nili  126 (312)
T cd05585          89 ---------RFDLSRARFYTAELLCAL-ENLHKFNVIYRDLKPENILL  126 (312)
T ss_pred             ---------CCCHHHHHHHHHHHHHHH-HHHHhCCeEeCCCCHHHeEE
Confidence                     588899999999999999 9999854    345877765

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.28  E-value=3e-11  Score=94.33  Aligned_cols=92  Identities=15%  Similarity=0.161  Sum_probs=74.6

Q ss_pred             CcchHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCC
Q psy3822           9 KRKETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPP   87 (138)
Q Consensus         9 ~~~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~   87 (138)
                      .......+.+.+|+.+|++|+||||+++++..+  .+.+++||||+. ++|.+++....                     
T Consensus        33 ~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~---------------------   89 (257)
T cd05115          33 ENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE--AEALMLVMEMASGGPLNKFLSGKK---------------------   89 (257)
T ss_pred             ccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc--CCCeEEEEEeCCCCCHHHHHHhCC---------------------
Confidence            334456678999999999999999999999664  357999999995 69999887422                     


Q ss_pred             CCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcceee
Q psy3822          88 ANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAFC  137 (138)
Q Consensus        88 ~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~~  137 (138)
                                   ..+++.++..++.||++|| .|||+..    .+.|++|.+.
T Consensus        90 -------------~~~~~~~~~~~~~~i~~~l-~~lH~~~i~H~dlkp~nil~~  129 (257)
T cd05115          90 -------------DEITVSNVVELMHQVSMGM-KYLEGKNFVHRDLAARNVLLV  129 (257)
T ss_pred             -------------CCCCHHHHHHHHHHHHHHH-HHHHhcCeeecccchheEEEc
Confidence                         1588899999999999999 9999865    4458887653

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.28  E-value=2e-11  Score=97.26  Aligned_cols=92  Identities=13%  Similarity=0.165  Sum_probs=75.6

Q ss_pred             chHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          11 KETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPAN   89 (138)
Q Consensus        11 ~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (138)
                      .....+.+++|+..|++|+||||+++++.+.+ .+.++++|||+. ++|.+++.....                      
T Consensus        39 ~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~-~~~~~~~~e~~~~~~l~~~l~~~~~----------------------   95 (314)
T cd08216          39 SKEDLKLLQQEIITSRQLQHPNILPYVTSFIV-DSELYVVSPLMAYGSCEDLLKTHFP----------------------   95 (314)
T ss_pred             chhHHHHHHHHHHHHHhcCCcchhhhhheeec-CCeEEEEEeccCCCCHHHHHHHhcc----------------------
Confidence            34566789999999999999999999997764 678999999995 799999975321                      


Q ss_pred             CCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcceee
Q psy3822          90 QSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAFC  137 (138)
Q Consensus        90 ~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~~  137 (138)
                                 ..+++..++.++.||++|| +|||+..    .+-|++|+++
T Consensus        96 -----------~~~~~~~~~~~~~~l~~~L-~~LH~~~ivH~dlk~~Nili~  135 (314)
T cd08216          96 -----------EGLPELAIAFILKDVLNAL-DYIHSKGFIHRSVKASHILLS  135 (314)
T ss_pred             -----------cCCCHHHHHHHHHHHHHHH-HHHHHCCeecCCCCcceEEEe
Confidence                       1588899999999999999 9999864    4457777653

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.28  E-value=1.6e-11  Score=96.67  Aligned_cols=85  Identities=12%  Similarity=0.043  Sum_probs=70.3

Q ss_pred             HHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          16 EILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASRP   95 (138)
Q Consensus        16 e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   95 (138)
                      ....+|+.+|++++||||+++++.++ +.+..++||||+.++|.+++....                             
T Consensus        48 ~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~L~~~~~~~~-----------------------------   97 (291)
T cd07844          48 FTAIREASLLKDLKHANIVTLHDIIH-TKKTLTLVFEYLDTDLKQYMDDCG-----------------------------   97 (291)
T ss_pred             hhHHHHHHHHhhCCCcceeeEEEEEe-cCCeEEEEEecCCCCHHHHHHhCC-----------------------------
Confidence            34568999999999999999999766 577999999999989999887432                             


Q ss_pred             cccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          96 THAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        96 ~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                           ..+++..++.++.||++|| .|||+..    .+-|++|++
T Consensus        98 -----~~~~~~~~~~~~~ql~~al-~~lH~~~i~H~dl~p~nil~  136 (291)
T cd07844          98 -----GGLSMHNVRLFLFQLLRGL-AYCHQRRVLHRDLKPQNLLI  136 (291)
T ss_pred             -----CCCCHHHHHHHHHHHHHHH-HHHHhCCeecccCCHHHEEE
Confidence                 1578899999999999999 9999764    334766654

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.28  E-value=2.7e-11  Score=104.70  Aligned_cols=92  Identities=13%  Similarity=0.082  Sum_probs=74.5

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      +.....+++|+..|++++||||+++++.+++ .+.+|+||||+. ++|.+.|.....                       
T Consensus       106 ~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~-~~~~~lv~E~~~gg~L~~~l~~~~~-----------------------  161 (478)
T PTZ00267        106 ERQAAYARSELHCLAACDHFGIVKHFDDFKS-DDKLLLIMEYGSGGDLNKQIKQRLK-----------------------  161 (478)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEE-CCEEEEEEECCCCCCHHHHHHHHHh-----------------------
Confidence            3445678999999999999999999998764 679999999995 799999874321                       


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                              ....|++.++..++.||+.|| .|||+..    .+.|++|..
T Consensus       162 --------~~~~l~~~~~~~i~~qi~~aL-~~lH~~~ivHrDlkp~NIll  202 (478)
T PTZ00267        162 --------EHLPFQEYEVGLLFYQIVLAL-DEVHSRKMMHRDLKSANIFL  202 (478)
T ss_pred             --------ccCCCCHHHHHHHHHHHHHHH-HHHHhCCEEECCcCHHhEEE
Confidence                    112689999999999999999 9999864    445777754

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.28  E-value=2.2e-11  Score=94.34  Aligned_cols=89  Identities=20%  Similarity=0.197  Sum_probs=73.6

Q ss_pred             chHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          11 KETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPAN   89 (138)
Q Consensus        11 ~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (138)
                      .....+.+++|+.+|++|+||||+++++.+++ .+.+++||||+. ++|.+++....                       
T Consensus        46 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~-----------------------  101 (267)
T cd06628          46 KRSMLDALAREIALLKELQHENIVQYLGSSLD-ADHLNIFLEYVPGGSVAALLNNYG-----------------------  101 (267)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEe-CCccEEEEEecCCCCHHHHHHhcc-----------------------
Confidence            34567889999999999999999999997765 678999999995 59999997432                       


Q ss_pred             CCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          90 QSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        90 ~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                  .+++.+++.++.||++|| +|||+..    .+-|++|.+
T Consensus       102 ------------~l~~~~~~~~~~~l~~~l-~~lH~~~ivH~di~p~nil~  139 (267)
T cd06628         102 ------------AFEETLVRNFVRQILKGL-NYLHNRGIIHRDIKGANILV  139 (267)
T ss_pred             ------------CccHHHHHHHHHHHHHHH-HHHHhcCcccccCCHHHEEE
Confidence                        478889999999999999 9999754    234777654

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.28  E-value=2.1e-11  Score=95.05  Aligned_cols=90  Identities=13%  Similarity=0.223  Sum_probs=75.4

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      +...+.+.+|+..+++++||||+++++.+.+ .+.+++||||+.++|.+++....                         
T Consensus        40 ~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~~~v~e~~~~~L~~~~~~~~-------------------------   93 (286)
T cd07832          40 GGIPNQALREIKALQACQHPYVVKLLDVFPH-GSGFVLVMEYMPSDLSEVLRDEE-------------------------   93 (286)
T ss_pred             chhhHHHHHHHHHHHhCCCCCCcceeeEEec-CCeeEEEecccCCCHHHHHHhcC-------------------------
Confidence            4556778999999999999999999997764 67899999999889999987432                         


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcceee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAFC  137 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~~  137 (138)
                               ..+++.++..++.||++|| .|||+..    .+-|++|+++
T Consensus        94 ---------~~~~~~~~~~~~~~i~~~l-~~lH~~~i~H~dl~p~ni~~~  133 (286)
T cd07832          94 ---------RPLPEAQVKSYMRMLLKGV-AYMHANGIMHRDLKPANLLIS  133 (286)
T ss_pred             ---------CCCCHHHHHHHHHHHHHHH-HHHHHCCeecCCcCHHHEEEc
Confidence                     1588999999999999999 9999764    3447777653

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>KOG0659|consensus

Probab=99.28  E-value=6.6e-12  Score=105.11  Aligned_cols=97  Identities=14%  Similarity=0.179  Sum_probs=81.7

Q ss_pred             ccCCCCcchHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCC
Q psy3822           4 KLHKPKRKETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGS   83 (138)
Q Consensus         4 k~~K~~~~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~   83 (138)
                      |+.....++.+--..-|||+.|+.|+||||+++.+.|- +++.+.+|+||+..+|.++++...                 
T Consensus        34 KIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~-~~~~l~lVfEfm~tdLe~vIkd~~-----------------   95 (318)
T KOG0659|consen   34 KIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFP-HKSNLSLVFEFMPTDLEVVIKDKN-----------------   95 (318)
T ss_pred             EeeccccccCccHHHHHHHHHHHHccCcchhhhhhhcc-CCCceEEEEEeccccHHHHhcccc-----------------
Confidence            45555566677777899999999999999999999887 578999999999999999998554                 


Q ss_pred             CCCCCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          84 SPPPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                       ..|+..+||.++.|+++|| +|||.+-    .+.|+++-+
T Consensus        96 -----------------i~l~pa~iK~y~~m~LkGl-~y~H~~~IlHRDlKPnNLLi  134 (318)
T KOG0659|consen   96 -----------------IILSPADIKSYMLMTLKGL-AYCHSKWILHRDLKPNNLLI  134 (318)
T ss_pred             -----------------cccCHHHHHHHHHHHHHHH-HHHHhhhhhcccCCccceEE
Confidence                             2688899999999999999 9999854    556777643

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.28  E-value=3.2e-11  Score=97.63  Aligned_cols=124  Identities=12%  Similarity=0.054  Sum_probs=76.9

Q ss_pred             hHHHHHHHHHHHHhhhC-CCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCC---CCC------------
Q psy3822          12 ETVTEILRLGVKQLEVY-RHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPN---HST------------   74 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rL-rHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~---~~~------------   74 (138)
                      ....+.+.+|+.+|.++ +||||+++++.+.+..+.++++|||+. ++|.++|.........   ...            
T Consensus        51 ~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (338)
T cd05102          51 ASEHKALMSELKILIHIGNHLNVVNLLGACTKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQ  130 (338)
T ss_pred             hHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhh
Confidence            34456789999999999 899999999977765567999999995 7999999754210000   000            


Q ss_pred             ------CCCCCCCCCCCC--CCCCC----CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          75 ------NPVTGGSGSSPP--PANQS----ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        75 ------~~~~~~~~~~~~--~~~~~----~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                            ...+......+.  +....    ...........+++.++..++.||++|| +|||+..    .+.|++|.+
T Consensus       131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL-~~LH~~~ivHrDiKp~Nil~  207 (338)
T cd05102         131 SRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDLWKSPLTMEDLICYSFQVARGM-EFLASRKCIHRDLAARNILL  207 (338)
T ss_pred             hccccccccccCCccccccccccCcccccchhccccccCCCCHHHHHHHHHHHHHHH-HHHHHCCEECCCCccceEEE
Confidence                  000000000000  00000    0000001122588899999999999999 9999864    445888765

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.28  E-value=2.4e-11  Score=100.76  Aligned_cols=87  Identities=10%  Similarity=0.131  Sum_probs=73.4

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      ...+.+++|+.+|+++.||||+++++.+.+ ++.+|+||||+. ++|.+++....                         
T Consensus        43 ~~~~~~~~E~~il~~~~h~~iv~~~~~~~~-~~~~~lv~E~~~gg~L~~~l~~~~-------------------------   96 (382)
T cd05625          43 NQVAHVKAERDILAEADNEWVVRLYYSFQD-KDNLYFVMDYIPGGDMMSLLIRMG-------------------------   96 (382)
T ss_pred             HHHHHHHHHHHHHHhCCCCcCCeEEEEEEe-CCEEEEEEeCCCCCcHHHHHHhcC-------------------------
Confidence            445778999999999999999999998874 679999999995 69999987432                         


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                .++|..++.++.||+.|| +|||+..    .+.|++|.+
T Consensus        97 ----------~~~e~~~~~~~~qi~~al-~~lH~~~ivHrDlKp~NILl  134 (382)
T cd05625          97 ----------IFPEDLARFYIAELTCAV-ESVHKMGFIHRDIKPDNILI  134 (382)
T ss_pred             ----------CCCHHHHHHHHHHHHHHH-HHHHhCCeecCCCCHHHEEE
Confidence                      478899999999999999 9999864    445777764

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.28  E-value=3.8e-11  Score=95.72  Aligned_cols=108  Identities=16%  Similarity=0.120  Sum_probs=76.3

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      +.....+.+|+.+|.+|+||||+++++.+.+ .+.+++||||+. ++|.+++..........     ....+..      
T Consensus        60 ~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~-----~~~~~~~------  127 (304)
T cd05096          60 KNARNDFLKEVKILSRLKDPNIIRLLGVCVD-EDPLCMITEYMENGDLNQFLSSHHLDDKEE-----NGNDAVP------  127 (304)
T ss_pred             HHHHHHHHHHHHHHhhcCCCCeeEEEEEEec-CCceEEEEecCCCCcHHHHHHhcccccccc-----ccccccc------
Confidence            4455678999999999999999999997764 568999999995 69999997543211000     0000000      


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcceee
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAFC  137 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~~  137 (138)
                           .......+++.++..++.||+.|| .|||+..    .+.|++|.++
T Consensus       128 -----~~~~~~~~~~~~~~~i~~~i~~al-~~lH~~~ivH~dlkp~Nill~  172 (304)
T cd05096         128 -----PAHCLPAISYSSLLHVALQIASGM-KYLSSLNFVHRDLATRNCLVG  172 (304)
T ss_pred             -----cccccccccHHHHHHHHHHHHHHH-HHHHHCCccccCcchhheEEc
Confidence                 001112578889999999999999 9999864    4458887653

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.27  E-value=3.3e-11  Score=92.63  Aligned_cols=87  Identities=20%  Similarity=0.230  Sum_probs=73.3

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ..+.+++|+.+|++++||||+++++.+++ .+.++++|||+. ++|.+++....                          
T Consensus        43 ~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~~l~~e~~~~~~l~~~~~~~~--------------------------   95 (262)
T cd06613          43 DFEIIQQEISMLKECRHPNIVAYFGSYLR-RDKLWIVMEYCGGGSLQDIYQVTR--------------------------   95 (262)
T ss_pred             hHHHHHHHHHHHHhCCCCChhceEEEEEe-CCEEEEEEeCCCCCcHHHHHHhhc--------------------------
Confidence            56788999999999999999999997764 678999999996 59999887431                          


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                              ..+++.+++.++.||++|| .|||+..    .+-|++|++
T Consensus        96 --------~~l~~~~~~~~~~ql~~~l-~~lh~~~i~h~dl~p~ni~i  134 (262)
T cd06613          96 --------GPLSELQIAYVCRETLKGL-AYLHETGKIHRDIKGANILL  134 (262)
T ss_pred             --------cCCCHHHHHHHHHHHHHHH-HHHHhCCceecCCChhhEEE
Confidence                    1588999999999999999 9999854    345888765

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.27  E-value=2.5e-11  Score=96.13  Aligned_cols=87  Identities=21%  Similarity=0.211  Sum_probs=73.1

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccc-cccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPV-YASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V-~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      ...+.+.+|+++|+++.||||+++++.+.+ .+.+++||||+ .++|.+++....                         
T Consensus        43 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~~v~e~~~~~~L~~~~~~~~-------------------------   96 (290)
T cd05580          43 KQVEHVLNEKRILQSIRHPFLVNLYGSFQD-DSNLYLVMEYVPGGELFSHLRKSG-------------------------   96 (290)
T ss_pred             hHHHHHHHHHHHHHhCCCCCccceeeEEEc-CCeEEEEEecCCCCCHHHHHHHcC-------------------------
Confidence            345778999999999999999999997764 67899999999 679999997432                         


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                .+++.+++.++.||++|| .|||+..    .+-|++|.+
T Consensus        97 ----------~l~~~~~~~~~~qil~~l-~~lH~~~i~H~dl~p~nili  134 (290)
T cd05580          97 ----------RFPEPVARFYAAQVVLAL-EYLHSLDIVYRDLKPENLLL  134 (290)
T ss_pred             ----------CCCHHHHHHHHHHHHHHH-HHHHHCCEecCCCCHHHEEE
Confidence                      588899999999999999 9999844    344777765

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.27  E-value=2.5e-11  Score=100.11  Aligned_cols=87  Identities=9%  Similarity=0.078  Sum_probs=74.0

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      ...+.+++|+.+|.++.||||+++++.+++ .+.+|+||||+. ++|.+++....                         
T Consensus        43 ~~~~~~~~E~~il~~~~~~~iv~~~~~~~~-~~~~~lv~E~~~gg~L~~~l~~~~-------------------------   96 (363)
T cd05628          43 EQVGHIRAERDILVEADSLWVVKMFYSFQD-KLNLYLIMEFLPGGDMMTLLMKKD-------------------------   96 (363)
T ss_pred             hHHHHHHHHHHHHHhCCCCCcceEEEEEec-CCeEEEEEcCCCCCcHHHHHHhcC-------------------------
Confidence            445788999999999999999999998774 678999999995 69999997432                         


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                .+++.+++.++.||+.|| +|||+..    .+.|++|.+
T Consensus        97 ----------~l~~~~~~~~~~qi~~aL-~~lH~~givHrDlKp~NILi  134 (363)
T cd05628          97 ----------TLTEEETQFYIAETVLAI-DSIHQLGFIHRDIKPDNLLL  134 (363)
T ss_pred             ----------CCCHHHHHHHHHHHHHHH-HHHHhCCeEecCCCHHHeEE
Confidence                      588999999999999999 9999864    445777765

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>PHA02988 hypothetical protein; Provisional

Probab=99.27  E-value=4.1e-11  Score=95.77  Aligned_cols=89  Identities=15%  Similarity=0.042  Sum_probs=71.6

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeee---cCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEE---CPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPP   87 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee---~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~   87 (138)
                      +.+.+.+++|+.+|.+|+||||+++++.+.+   +...+++||||+. ++|.+++.+..                     
T Consensus        59 ~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~---------------------  117 (283)
T PHA02988         59 KVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVLDKEK---------------------  117 (283)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeCCCCcHHHHHhhCC---------------------
Confidence            4457889999999999999999999997654   2357999999996 69999997432                     


Q ss_pred             CCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC-----CcccCccee
Q psy3822          88 ANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS-----TYLPSSVAF  136 (138)
Q Consensus        88 ~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a-----~~~~~~~~~  136 (138)
                                    .+++.....++.|++.|| .|||+..     .+.|+++.+
T Consensus       118 --------------~~~~~~~~~i~~~i~~~l-~~lH~~~~~~Hrdlkp~nill  156 (283)
T PHA02988        118 --------------DLSFKTKLDMAIDCCKGL-YNLYKYTNKPYKNLTSVSFLV  156 (283)
T ss_pred             --------------CCChhHHHHHHHHHHHHH-HHHHhcCCCCCCcCChhhEEE
Confidence                          466778888999999999 9999753     344776654

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.27  E-value=2.5e-11  Score=100.24  Aligned_cols=87  Identities=16%  Similarity=0.128  Sum_probs=72.9

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      ...+.+.+|+.+|++|+||||+++++.+++ .+.+++||||+. ++|.+++....                         
T Consensus        73 ~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~-~~~~~lv~Ey~~~g~L~~~i~~~~-------------------------  126 (340)
T PTZ00426         73 KQVDHVFSERKILNYINHPFCVNLYGSFKD-ESYLYLVLEFVIGGEFFTFLRRNK-------------------------  126 (340)
T ss_pred             hhHHHHHHHHHHHHhCCCCCCcceEEEEEe-CCEEEEEEeCCCCCcHHHHHHHcC-------------------------
Confidence            345678899999999999999999998764 678999999994 79999997432                         


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                .+++..++.++.||+.|| .|||+..    .+.|++|.+
T Consensus       127 ----------~~~~~~~~~~~~qi~~aL-~~LH~~~ivHrDLkp~NILl  164 (340)
T PTZ00426        127 ----------RFPNDVGCFYAAQIVLIF-EYLQSLNIVYRDLKPENLLL  164 (340)
T ss_pred             ----------CCCHHHHHHHHHHHHHHH-HHHHHCCeEccCCCHHHEEE
Confidence                      588899999999999999 9999854    445777654

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.27  E-value=2.5e-11  Score=95.80  Aligned_cols=90  Identities=21%  Similarity=0.162  Sum_probs=72.6

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeecC-CeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEECP-DALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~-~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      +.....+.+|+..|.+++||||+++++.+.... +.+++||||+.++|.+++....                        
T Consensus        45 ~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~------------------------  100 (293)
T cd07843          45 EGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMVMEYVEHDLKSLMETMK------------------------  100 (293)
T ss_pred             ccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEEehhcCcCHHHHHHhcc------------------------
Confidence            334456678999999999999999999776532 7899999999989999987432                        


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                ..+++.+++.++.||++|| +|||+..    .+-|++|+.
T Consensus       101 ----------~~l~~~~~~~i~~qi~~aL-~~LH~~~i~H~dl~p~nili  139 (293)
T cd07843         101 ----------QPFLQSEVKCLMLQLLSGV-AHLHDNWILHRDLKTSNLLL  139 (293)
T ss_pred             ----------CCCCHHHHHHHHHHHHHHH-HHHHHCCeeeccCCHHHEEE
Confidence                      1588999999999999999 9999764    334666654

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.27  E-value=4.1e-11  Score=91.17  Aligned_cols=96  Identities=11%  Similarity=0.073  Sum_probs=76.8

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccc-cccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPV-YASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V-~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ..+.+++|+..+.+++||||+++++.+.+ .+.++++|||+ .++|.+++.......                       
T Consensus        39 ~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~-----------------------   94 (262)
T cd00192          39 ERKDFLKEARVMKKLGHPNVVRLLGVCTE-EEPLYLVLEYMEGGDLLDYLRKSRPVF-----------------------   94 (262)
T ss_pred             HHHHHHHHHHHHhhcCCCChheeeeeecC-CCceEEEEEeccCCcHHHHHhhccccc-----------------------
Confidence            56888999999999999999999997764 77899999999 689999998642110                       


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcceee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAFC  137 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~~  137 (138)
                         .......+++.++..++.||+.|| .|||+..    .+-|++|+++
T Consensus        95 ---~~~~~~~~~~~~~~~~~~~l~~al-~~lH~~~i~H~di~p~nili~  139 (262)
T cd00192          95 ---PSPEKSTLSLKDLLSFAIQIAKGM-EYLASKKFVHRDLAARNCLVG  139 (262)
T ss_pred             ---cccccccCCHHHHHHHHHHHHHHH-HHHHcCCcccCccCcceEEEC
Confidence               000112689999999999999999 9999854    4458888764

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.27  E-value=1.5e-11  Score=96.32  Aligned_cols=89  Identities=16%  Similarity=0.105  Sum_probs=72.8

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ...+.+.+|++.|++|+||||+++++.++ +.+.+++||||+.++|.+++.....                         
T Consensus        41 ~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~~v~e~~~~~l~~~~~~~~~-------------------------   94 (284)
T cd07860          41 GVPSTAIREISLLKELNHPNIVKLLDVIH-TENKLYLVFEFLHQDLKKFMDASPL-------------------------   94 (284)
T ss_pred             ccchHHHHHHHHHHhcCCCCCcchhhhcc-cCCcEEEEeeccccCHHHHHHhCCC-------------------------
Confidence            34467889999999999999999999776 4678999999998899988864321                         


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                              ..+++..++.++.||++|| +|||+..    .+-|++++.
T Consensus        95 --------~~l~~~~~~~~~~~i~~~l-~~lh~~~i~H~~l~p~nill  133 (284)
T cd07860          95 --------SGIPLPLIKSYLFQLLQGL-AFCHSHRVLHRDLKPQNLLI  133 (284)
T ss_pred             --------CCCCHHHHHHHHHHHHHHH-HHHHHCCeecCCCCHHHEEE
Confidence                    2588899999999999999 9999864    334666654

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>KOG0032|consensus

Probab=99.26  E-value=2.4e-11  Score=104.49  Aligned_cols=86  Identities=20%  Similarity=0.252  Sum_probs=74.9

Q ss_pred             HHHHHHHHHHHhhhCC-CCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYR-HPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLr-HPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      -.+.+++|+++|++|. |||||++++.+| +++.+++|||+|. |+|++.+...                          
T Consensus        78 ~~~~v~~Ev~il~~l~~hpniv~l~~~~e-~~~~~~lvmEL~~GGeLfd~i~~~--------------------------  130 (382)
T KOG0032|consen   78 DREDVRREVAILQQLSGHPNIVQLKDAFE-DPDSVYLVMELCEGGELFDRIVKK--------------------------  130 (382)
T ss_pred             cHHHHHHHHHHHHhccCCCCEEEEEEEEE-cCCeEEEEEEecCCchHHHHHHHc--------------------------
Confidence            3578899999999999 999999999887 5789999999996 7999999732                          


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcceee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAFC  137 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~~  137 (138)
                                .++|.++...+.||++|+ .|||+..    .+.|.++.|+
T Consensus       131 ----------~~sE~da~~~~~~il~av-~~lH~~gvvHrDlKpEN~L~~  169 (382)
T KOG0032|consen  131 ----------HYSERDAAGIIRQILEAV-KYLHSLGVVHRDLKPENLLLA  169 (382)
T ss_pred             ----------cCCHHHHHHHHHHHHHHH-HHHHhCCceeccCCHHHeeec
Confidence                      289999999999999999 9999855    4468888775

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.26  E-value=3.2e-11  Score=94.19  Aligned_cols=89  Identities=10%  Similarity=0.052  Sum_probs=72.4

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSAS   93 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (138)
                      ..+.+.+|+.+|++|+||||+++++.+++ .+.+++||||+.++|.+++.....                          
T Consensus        41 ~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~~~l~~~~~~~~~--------------------------   93 (284)
T cd07836          41 TPSTAIREISLMKELKHENIVRLHDVIHT-ENKLMLVFEYMDKDLKKYMDTHGV--------------------------   93 (284)
T ss_pred             chHHHHHHHHHHHhhcCCCEeeeeeeEee-CCcEEEEEecCCccHHHHHHhcCC--------------------------
Confidence            34667889999999999999999998775 678999999999999988874331                          


Q ss_pred             CCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          94 RPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        94 ~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                            ...+++..+..++.||++|| +|||+..    .+-|++|++
T Consensus        94 ------~~~~~~~~~~~~~~qi~~~l-~~lH~~~i~h~dl~p~ni~~  133 (284)
T cd07836          94 ------RGALDPNTVKSFTYQLLKGI-AFCHENRVLHRDLKPQNLLI  133 (284)
T ss_pred             ------CCCcCHHHHHHHHHHHHHHH-HHHHHCCeeeCCCCHHHEEE
Confidence                  12589999999999999999 9999764    334666654

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.26  E-value=4.9e-11  Score=93.41  Aligned_cols=89  Identities=18%  Similarity=0.197  Sum_probs=73.7

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      ....+.+.+|+.+|++|+||||+++++.+. +.+.+++||||+. ++|.+++...+                        
T Consensus        43 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~------------------------   97 (280)
T cd06611          43 EEELEDFMVEIDILSECKHPNIVGLYEAYF-YENKLWILIEFCDGGALDSIMLELE------------------------   97 (280)
T ss_pred             HHHHHHHHHHHHHHHhCCCCceeEEEEEEe-cCCeEEEEeeccCCCcHHHHHHHhc------------------------
Confidence            344577889999999999999999999776 4778999999996 69999987432                        


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                ..+++.+++.++.||++|| .|||+..    .+-|+++++
T Consensus        98 ----------~~l~~~~~~~~~~ql~~~l-~~lh~~~i~h~dl~p~nili  136 (280)
T cd06611          98 ----------RGLTEPQIRYVCRQMLEAL-NFLHSHKVIHRDLKAGNILL  136 (280)
T ss_pred             ----------CCCCHHHHHHHHHHHHHHH-HHHHHCCcccCCCChhhEEE
Confidence                      1588999999999999999 9999754    345777665

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.25  E-value=3.5e-11  Score=98.22  Aligned_cols=86  Identities=20%  Similarity=0.167  Sum_probs=71.8

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ....+.+|+.+|++++||||+++++.++ +.+.+++||||+. ++|.+.+....                          
T Consensus        38 ~~~~~~~E~~~l~~l~hp~iv~~~~~~~-~~~~~~lv~Ey~~~g~L~~~l~~~~--------------------------   90 (328)
T cd05593          38 EVAHTLTESRVLKNTRHPFLTSLKYSFQ-TKDRLCFVMEYVNGGELFFHLSRER--------------------------   90 (328)
T ss_pred             HHHHHHHHHHHHHhCCCCCCcceEEEEE-cCCEEEEEEeCCCCCCHHHHHHhcC--------------------------
Confidence            4466788999999999999999999776 4779999999995 69988886422                          


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                               .+++.+++.++.||+.|| +|||+..    .+.|++|.+
T Consensus        91 ---------~l~~~~~~~~~~qi~~aL-~~LH~~~ivHrDikp~NIll  128 (328)
T cd05593          91 ---------VFSEDRTRFYGAEIVSAL-DYLHSGKIVYRDLKLENLML  128 (328)
T ss_pred             ---------CCCHHHHHHHHHHHHHHH-HHHHhCCeEecccCHHHeEE
Confidence                     588999999999999999 9999864    345777765

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.25  E-value=4.1e-11  Score=98.58  Aligned_cols=88  Identities=8%  Similarity=0.064  Sum_probs=74.3

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      ....+.+++|+.+|.+++||||+++++.++ +.+.+|+||||+. ++|.+++.+..                        
T Consensus        42 ~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~-~~~~~~lv~E~~~gg~L~~~l~~~~------------------------   96 (360)
T cd05627          42 KEQVAHIRAERDILVEADGAWVVKMFYSFQ-DKRNLYLIMEFLPGGDMMTLLMKKD------------------------   96 (360)
T ss_pred             hhhHHHHHHHHHHHHhCCCCCEeeEEEEEE-cCCEEEEEEeCCCCccHHHHHHhcC------------------------
Confidence            345678899999999999999999999876 4779999999995 69999997432                        


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                 .+++..++.++.||+.|| +|||+..    .+.|++|.+
T Consensus        97 -----------~l~~~~~~~~~~qi~~~L-~~lH~~givHrDLkp~NIli  134 (360)
T cd05627          97 -----------TLSEEATQFYIAETVLAI-DAIHQLGFIHRDIKPDNLLL  134 (360)
T ss_pred             -----------CCCHHHHHHHHHHHHHHH-HHHHHCCeEccCCCHHHEEE
Confidence                       588999999999999999 9999864    445777765

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.25  E-value=6.2e-11  Score=93.43  Aligned_cols=90  Identities=14%  Similarity=0.031  Sum_probs=73.8

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeec-CCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEEC-PDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPAN   89 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~-~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (138)
                      ....+.+++|++.|++++||||+++++.+++. ...+++||||+. ++|.+++....                       
T Consensus        47 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~-----------------------  103 (284)
T cd05079          47 GNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPRNK-----------------------  103 (284)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceEEEEEccCCCCHHHHHHhcc-----------------------
Confidence            44567889999999999999999999977654 357999999994 79999986432                       


Q ss_pred             CCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          90 QSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        90 ~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                 ..+++.++..++.||+.|| +|||+..    .+.|++|.+
T Consensus       104 -----------~~~~~~~~~~i~~~i~~aL-~~lH~~gi~H~dlkp~Nil~  142 (284)
T cd05079         104 -----------NKINLKQQLKYAVQICKGM-DYLGSRQYVHRDLAARNVLV  142 (284)
T ss_pred             -----------CCCCHHHHHHHHHHHHHHH-HHHHHCCeeecccchheEEE
Confidence                       1478889999999999999 9999865    445888765

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.24  E-value=3.6e-11  Score=97.57  Aligned_cols=86  Identities=15%  Similarity=0.167  Sum_probs=71.2

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ....+++|+.+|++|+||||+++++.+++ .+.+|+||||+. ++|.+.+....                          
T Consensus        43 ~~~~~~~E~~il~~l~hp~iv~~~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~--------------------------   95 (323)
T cd05584          43 DTAHTKAERNILEAVKHPFIVDLIYAFQT-GGKLYLILEYLSGGELFMHLEREG--------------------------   95 (323)
T ss_pred             hHHHHHHHHHHHHhCCCCchhceeeEEec-CCeEEEEEeCCCCchHHHHHHHcC--------------------------
Confidence            34567899999999999999999997764 678999999995 69999887432                          


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                               .+.+.+++.++.||+.|| +|||+..    .+.|++|.+
T Consensus        96 ---------~~~~~~~~~~~~qi~~~l-~~lH~~~ivH~dlkp~Nil~  133 (323)
T cd05584          96 ---------IFMEDTACFYLSEISLAL-EHLHQQGIIYRDLKPENILL  133 (323)
T ss_pred             ---------CCCHHHHHHHHHHHHHHH-HHHHHCCeecCCCCHHHeEE
Confidence                     477889999999999999 9999854    345777664

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.24  E-value=6.2e-11  Score=92.22  Aligned_cols=87  Identities=20%  Similarity=0.177  Sum_probs=72.5

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      ...+.+++|+..|++++||||+++++.++ +.+.+++||||+. ++|.+++....                         
T Consensus        50 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~-------------------------  103 (272)
T cd06629          50 DMVKALRSEIETLKDLDHLNIVQYLGFET-TEEYLSIFLEYVPGGSIGSCLRTYG-------------------------  103 (272)
T ss_pred             HHHHHHHHHHHHHHhcCCCCcceEEEEec-cCCceEEEEecCCCCcHHHHHhhcc-------------------------
Confidence            35678899999999999999999999665 5789999999995 69999997432                         


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                .+++..++.++.||+.|| .|||+..    .+-|++|.+
T Consensus       104 ----------~l~~~~~~~~~~qi~~~l-~~lH~~~i~H~dl~~~nil~  141 (272)
T cd06629         104 ----------RFEEQLVRFFTEQVLEGL-AYLHSKGILHRDLKADNLLV  141 (272)
T ss_pred             ----------CCCHHHHHHHHHHHHHHH-HHHhhCCeeecCCChhhEEE
Confidence                      588889999999999999 9999854    334777665

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.24  E-value=5.3e-11  Score=96.40  Aligned_cols=90  Identities=17%  Similarity=0.072  Sum_probs=74.3

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      +...+.+++|+.++++++||||+++++.++. .+.+++||||+. ++|.+++.+...                       
T Consensus        40 ~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~-~~~~~~v~e~~~~~~l~~~l~~~~~-----------------------   95 (328)
T cd08226          40 EEHLKALQNEVVLSHFFRHPNIMTSWTVFTT-GSWLWVISPFMAYGSANSLLKTYFP-----------------------   95 (328)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCcceEeeeEec-CCceEEEEecccCCCHHHHHHhhcc-----------------------
Confidence            4456899999999999999999999997764 678999999985 699999875421                       


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                ..+++..++.++.||++|| +|||+..    .+.|++|..
T Consensus        96 ----------~~~~~~~~~~~~~qi~~aL-~~lH~~~ivHrDlkp~Nill  134 (328)
T cd08226          96 ----------EGMSEALIGNILFGALRGL-NYLHQNGYIHRNIKASHILI  134 (328)
T ss_pred             ----------cCCCHHHHHHHHHHHHHHH-HHHHhCCeecCCCCHHHEEE
Confidence                      1488999999999999999 9999754    445777654

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>KOG0591|consensus

Probab=99.24  E-value=3.2e-12  Score=108.14  Aligned_cols=92  Identities=12%  Similarity=0.094  Sum_probs=75.2

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEec-eeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLH-PIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e-~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      ...+.+-.|+.+|+.|.|||||+++. .|.+.+..|++|||+|. |+|+++++......                     
T Consensus        60 k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivmE~c~~GDLsqmIk~~K~qk---------------------  118 (375)
T KOG0591|consen   60 KARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVMELCDAGDLSQMIKHFKKQK---------------------  118 (375)
T ss_pred             HHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHHHhhcccCHHHHHHHHHhcc---------------------
Confidence            34567789999999999999999998 78777778999999995 79999997543221                     


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcC--CC------CcccCccee
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYV--PS------TYLPSSVAF  136 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~--~a------~~~~~~~~~  136 (138)
                                -.++|..|++++.|++.|| .-||.  +.      ...|-+||.
T Consensus       119 ----------r~ipE~~Vwk~f~QL~~AL-~~cH~~~~r~~VmHRDIKPaNIFl  161 (375)
T KOG0591|consen  119 ----------RLIPEKTVWKYFVQLCRAL-YHCHSKIPRGTVMHRDIKPANIFL  161 (375)
T ss_pred             ----------ccCchHHHHHHHHHHHHHH-HHHhccccccceeeccCcchheEE
Confidence                      2699999999999999999 99999  33      223777653

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.24  E-value=3.8e-11  Score=95.59  Aligned_cols=85  Identities=15%  Similarity=0.071  Sum_probs=70.7

Q ss_pred             HHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          16 EILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASRP   95 (138)
Q Consensus        16 e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   95 (138)
                      ..+.+|+..|++|+||||+++++.++ +.+.+++||||+.++|.+++....                             
T Consensus        49 ~~~~~E~~~l~~l~h~nI~~~~~~~~-~~~~~~lv~e~~~~~l~~~l~~~~-----------------------------   98 (301)
T cd07873          49 CTAIREVSLLKDLKHANIVTLHDIIH-TEKSLTLVFEYLDKDLKQYLDDCG-----------------------------   98 (301)
T ss_pred             hHHHHHHHHHHhcCCCCcceEEEEEe-cCCeEEEEEeccccCHHHHHHhcC-----------------------------
Confidence            45678999999999999999999876 467899999999999998886432                             


Q ss_pred             cccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          96 THAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        96 ~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                           ..+++.+++.++.||++|| +|||+..    .+.|++|++
T Consensus        99 -----~~~~~~~~~~~~~qi~~aL-~~lH~~~i~H~dlkp~Nil~  137 (301)
T cd07873          99 -----NSINMHNVKLFLFQLLRGL-NYCHRRKVLHRDLKPQNLLI  137 (301)
T ss_pred             -----CCCCHHHHHHHHHHHHHHH-HHHHhCCeeCCCCCHHHEEE
Confidence                 1478889999999999999 9999864    344776654

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.24  E-value=1.6e-11  Score=96.10  Aligned_cols=88  Identities=11%  Similarity=0.040  Sum_probs=72.8

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ...+.+.+|+..|++++||||+++++.+.+ .+.++++|||+.++|.+.+....                          
T Consensus        41 ~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~~~l~~~~~~~~--------------------------   93 (284)
T cd07839          41 GVPSSALREICLLKELKHKNIVRLYDVLHS-DKKLTLVFEYCDQDLKKYFDSCN--------------------------   93 (284)
T ss_pred             cCccchhHHHHHHHhcCCCCeeeHHHHhcc-CCceEEEEecCCCCHHHHHHhcC--------------------------
Confidence            344567889999999999999999998874 67899999999989988876321                          


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                              ..+++..++.++.||++|| .|||+..    .+-|++|++
T Consensus        94 --------~~~~~~~~~~~~~qi~~al-~~LH~~~i~H~dl~~~nil~  132 (284)
T cd07839          94 --------GDIDPEIVKSFMFQLLKGL-AFCHSHNVLHRDLKPQNLLI  132 (284)
T ss_pred             --------CCCCHHHHHHHHHHHHHHH-HHHHHCCEecCCCCHHHEEE
Confidence                    1588999999999999999 9999864    445777765

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.24  E-value=8.9e-11  Score=92.27  Aligned_cols=87  Identities=17%  Similarity=0.094  Sum_probs=71.5

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecC-CeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECP-DALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~-~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      ...+.+++|+..|++|+||||+++++.+.+.. ..++++|||+. ++|.+++...                         
T Consensus        48 ~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-------------------------  102 (283)
T cd05080          48 QNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLIMEYVPLGSLRDYLPKH-------------------------  102 (283)
T ss_pred             HHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEEecCCCCCCHHHHHHHc-------------------------
Confidence            34567789999999999999999999765443 47999999995 6999988632                         


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                 .+++.++..++.||++|| +|||+..    .+.|++|.+
T Consensus       103 -----------~l~~~~~~~i~~~l~~~l-~~lH~~~i~H~dlkp~Nili  140 (283)
T cd05080         103 -----------KLNLAQLLLFAQQICEGM-AYLHSQHYIHRDLAARNVLL  140 (283)
T ss_pred             -----------CCCHHHHHHHHHHHHHHH-HHHHHCCeeccccChheEEE
Confidence                       488899999999999999 9999865    445888765

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.24  E-value=7.7e-11  Score=90.78  Aligned_cols=89  Identities=15%  Similarity=0.131  Sum_probs=74.4

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      ...+.+.+|+..|++++||||+++++.+++  +.+++||||+. ++|.+.+.....                        
T Consensus        38 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~~~v~e~~~~~~L~~~l~~~~~------------------------   91 (257)
T cd05040          38 DIMDDFLKEAAIMHSLDHENLIRLYGVVLT--HPLMMVTELAPLGSLLDRLRKDAL------------------------   91 (257)
T ss_pred             HHHHHHHHHHHHHhhcCCCCccceeEEEcC--CeEEEEEEecCCCcHHHHHHhccc------------------------
Confidence            567888999999999999999999997775  78999999995 799999975321                        


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcceee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAFC  137 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~~  137 (138)
                               ..+++..+..++.||++|| +|||+..    .+-|++|+++
T Consensus        92 ---------~~~~~~~~~~~~~qi~~~L-~~lH~~~i~H~di~p~nil~~  131 (257)
T cd05040          92 ---------GHFLISTLCDYAVQIANGM-RYLESKRFIHRDLAARNILLA  131 (257)
T ss_pred             ---------ccCcHHHHHHHHHHHHHHH-HHHHhCCccccccCcccEEEe
Confidence                     1578899999999999999 9999865    3458887653

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.24  E-value=7.5e-11  Score=93.16  Aligned_cols=91  Identities=14%  Similarity=0.081  Sum_probs=73.7

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      +...+.+.+|+.+|++++||||+++++.+. +.+..++||||+.++|.+.+....                         
T Consensus        42 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~l~~~~~~~~-------------------------   95 (294)
T PLN00009         42 EGVPSTAIREISLLKEMQHGNIVRLQDVVH-SEKRLYLVFEYLDLDLKKHMDSSP-------------------------   95 (294)
T ss_pred             ccchHHHHHHHHHHHhccCCCEeeEEEEEe-cCCeEEEEEecccccHHHHHHhCC-------------------------
Confidence            345577889999999999999999999776 467999999999888888876322                         


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcceee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAFC  137 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~~  137 (138)
                              ...+++..++.++.||+.|| +|||+..    .+-|++|++.
T Consensus        96 --------~~~~~~~~~~~~~~qi~~aL-~~LH~~~i~H~dl~p~nill~  136 (294)
T PLN00009         96 --------DFAKNPRLIKTYLYQILRGI-AYCHSHRVLHRDLKPQNLLID  136 (294)
T ss_pred             --------CCCcCHHHHHHHHHHHHHHH-HHHHhCCeeCCCCCcceEEEE
Confidence                    12467888999999999999 9999864    3458887763

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.23  E-value=5e-11  Score=96.73  Aligned_cols=86  Identities=12%  Similarity=0.060  Sum_probs=72.2

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ..+.+.+|+.+|.+++||||+++++.++ ..+.+|+||||+. ++|.+++....                          
T Consensus        44 ~~~~~~~e~~~l~~~~h~~iv~~~~~~~-~~~~~~lv~e~~~g~~L~~~l~~~~--------------------------   96 (333)
T cd05600          44 EVRHVLTERDILTTTKSEWLVKLLYAFQ-DDEYLYLAMEYVPGGDFRTLLNNLG--------------------------   96 (333)
T ss_pred             HHHHHHHHHHHHHhCCCCCCccEEEEEE-cCCEEEEEEeCCCCCCHHHHHHHcC--------------------------
Confidence            3466789999999999999999999776 4679999999995 69999997432                          


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                               .+++.+++.++.||+.|| .|||+..    .+.|++|.+
T Consensus        97 ---------~l~~~~~~~~~~qi~~~l-~~lH~~~ivH~dlkp~Nil~  134 (333)
T cd05600          97 ---------VLSEDHARFYMAEMFEAV-DALHELGYIHRDLKPENFLI  134 (333)
T ss_pred             ---------CCCHHHHHHHHHHHHHHH-HHHHHCCccccCCCHHHEEE
Confidence                     578899999999999999 9999754    445777765

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.23  E-value=6.2e-11  Score=91.74  Aligned_cols=87  Identities=18%  Similarity=0.162  Sum_probs=72.0

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      ...+.+.+|+++|++++||||+++++.++ +.+.++++|||+. ++|.+++.+..                         
T Consensus        35 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~-------------------------   88 (262)
T cd05572          35 GQQEHIFSEKEILEECNHPFIVKLYRTFK-DKKYIYMLMEYCLGGELWTILRDRG-------------------------   88 (262)
T ss_pred             hHHHHHHHHHHHHHhCCCCCEeeeeeeEE-cCCccEEEEecCCCCcHHHHHhhcC-------------------------
Confidence            34578899999999999999999999776 4678999999985 79999997432                         


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                .+++..++.++.||++|| .|||+..    .+-|++|++
T Consensus        89 ----------~l~~~~~~~~~~~i~~~l-~~lH~~~~~h~dl~~~nilv  126 (262)
T cd05572          89 ----------LFDEYTARFYIACVVLAF-EYLHNRGIIYRDLKPENLLL  126 (262)
T ss_pred             ----------CCCHHHHHHHHHHHHHHH-HHHhhCCcccCCCCHHHEEE
Confidence                      478889999999999999 9999844    334777654

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.23  E-value=2.4e-11  Score=93.84  Aligned_cols=87  Identities=11%  Similarity=0.204  Sum_probs=73.0

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      ...+.+.+|++.|++|+||||+++++.++ +.+.+++||||+. ++|.+.+....                         
T Consensus        42 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~-------------------------   95 (258)
T cd05578          42 GSVRNVLNERRILQELNHPFLVNLWYSFQ-DEENMYLVVDLLLGGDLRYHLSQKV-------------------------   95 (258)
T ss_pred             hHHHHHHHHHHHHHhCCCCChHHHHHhhc-CCCeEEEEEeCCCCCCHHHHHHhcC-------------------------
Confidence            45678899999999999999999999776 4678999999995 69999987431                         


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                .+++.+++.++.||++|| .|||+..    .+-|++|.+
T Consensus        96 ----------~l~~~~~~~~~~~i~~~l-~~lh~~~i~h~dl~~~nil~  133 (258)
T cd05578          96 ----------KFSEEQVKFWICEIVLAL-EYLHSKGIIHRDIKPDNILL  133 (258)
T ss_pred             ----------CcCHHHHHHHHHHHHHHH-HHHHhCCeeccCCCHHHeEE
Confidence                      578899999999999999 9999754    334777654

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.23  E-value=5.7e-11  Score=93.81  Aligned_cols=89  Identities=15%  Similarity=0.179  Sum_probs=74.2

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      +.....+.+|+.+|++++||||+++++.+.+ .+.+++||||+.++|.+++....                         
T Consensus        43 ~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~~lv~e~~~~~L~~~i~~~~-------------------------   96 (298)
T cd07841          43 DGINFTALREIKLLQELKHPNIIGLLDVFGH-KSNINLVFEFMETDLEKVIKDKS-------------------------   96 (298)
T ss_pred             chhhHHHHHHHHHHhhcCCCCChhhhheeec-CCEEEEEEcccCCCHHHHHhccC-------------------------
Confidence            4455677899999999999999999997775 67999999999889999997432                         


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                               ..+++.++..++.||++|| .|||+..    .+.|++|++
T Consensus        97 ---------~~~~~~~~~~~~~qi~~al-~~lH~~~i~H~dl~p~nill  135 (298)
T cd07841          97 ---------IVLTPADIKSYMLMTLRGL-EYLHSNWILHRDLKPNNLLI  135 (298)
T ss_pred             ---------CCCCHHHHHHHHHHHHHHH-HHHHhCCeeecCCChhhEEE
Confidence                     1588899999999999999 9999865    345777764

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.23  E-value=5.3e-11  Score=91.18  Aligned_cols=90  Identities=12%  Similarity=0.028  Sum_probs=73.8

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      +...+.+++|+..|++++||||+++++.++ .++.+++||||+. ++|.+++.....                       
T Consensus        40 ~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~-----------------------   95 (256)
T cd08220          40 KDERLAAQNECQVLKLLSHPNIIEYYENFL-EDKALMIVMEYAPGGTLAEYIQKRCN-----------------------   95 (256)
T ss_pred             cHHHHHHHHHHHHHhhCCCCchhheeeeEe-cCCEEEEEEecCCCCCHHHHHHHhcc-----------------------
Confidence            445678899999999999999999999776 4678999999995 699999975321                       


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                ..+++.++..++.|+++|| .|||+..    .+-|++|++
T Consensus        96 ----------~~~~~~~~~~~~~~i~~~l-~~lh~~~i~h~dl~~~nil~  134 (256)
T cd08220          96 ----------SLLDEDTILHFFVQILLAL-HHVHTKLILHRDLKTQNILL  134 (256)
T ss_pred             ----------cCCCHHHHHHHHHHHHHHH-HHHHhCCeecCCCCHHHEEE
Confidence                      1488999999999999999 9999754    334776665

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>KOG0660|consensus

Probab=99.23  E-value=2.2e-11  Score=104.25  Aligned_cols=96  Identities=19%  Similarity=0.210  Sum_probs=80.4

Q ss_pred             ccCCCCcchHHHHHHHHHHHHhhhCCCCCeeEEeceeee----cCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCC
Q psy3822           4 KLHKPKRKETVTEILRLGVKQLEVYRHPKILSVLHPIEE----CPDALAFATEPVYASLASILAFQESPAPNHSTNPVTG   79 (138)
Q Consensus         4 k~~K~~~~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee----~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~   79 (138)
                      |+..+.......++.-||++.|+++|||||+.+++.+--    .-+.+|+|+|++..+|.++++...             
T Consensus        54 Ki~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvYiV~elMetDL~~iik~~~-------------  120 (359)
T KOG0660|consen   54 KILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVYLVFELMETDLHQIIKSQQ-------------  120 (359)
T ss_pred             hhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeEEehhHHhhHHHHHHHcCc-------------
Confidence            555556667777889999999999999999999996643    124799999999999999998432             


Q ss_pred             CCCCCCCCCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcce
Q psy3822          80 GSGSSPPPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVA  135 (138)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~  135 (138)
                                            .|++..+|+.+.||+.|| .|+|+-.    .+.|++++
T Consensus       121 ----------------------~L~d~H~q~f~YQiLrgL-KyiHSAnViHRDLKPsNll  157 (359)
T KOG0660|consen  121 ----------------------DLTDDHAQYFLYQILRGL-KYIHSANVIHRDLKPSNLL  157 (359)
T ss_pred             ----------------------cccHHHHHHHHHHHHHhc-chhhcccccccccchhhee
Confidence                                  489999999999999999 9999844    66798875

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.22  E-value=4.7e-11  Score=95.55  Aligned_cols=85  Identities=13%  Similarity=0.063  Sum_probs=70.2

Q ss_pred             HHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          16 EILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASRP   95 (138)
Q Consensus        16 e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   95 (138)
                      ..+.+|+..|++|+||||+++++.++ +.+.+++||||+.++|.+.+....                             
T Consensus        49 ~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~~~l~~~~~~~~-----------------------------   98 (309)
T cd07872          49 CTAIREVSLLKDLKHANIVTLHDIVH-TDKSLTLVFEYLDKDLKQYMDDCG-----------------------------   98 (309)
T ss_pred             hhHHHHHHHHHhCCCCCcceEEEEEe-eCCeEEEEEeCCCCCHHHHHHhcC-----------------------------
Confidence            45678999999999999999999776 467899999999989988886432                             


Q ss_pred             cccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          96 THAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        96 ~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                           ..+++.+++.++.||+.|| +|||+..    .+.|++|.+
T Consensus        99 -----~~~~~~~~~~~~~qi~~aL-~~lH~~~ivH~dlkp~Nill  137 (309)
T cd07872          99 -----NIMSMHNVKIFLYQILRGL-AYCHRRKVLHRDLKPQNLLI  137 (309)
T ss_pred             -----CCCCHHHHHHHHHHHHHHH-HHHHHCCeecCCCCHHHEEE
Confidence                 1478889999999999999 9999864    344777654

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.22  E-value=7e-11  Score=91.07  Aligned_cols=85  Identities=13%  Similarity=0.116  Sum_probs=71.1

Q ss_pred             HHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSAS   93 (138)
Q Consensus        15 ~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (138)
                      .+.+++|+..|++|+||||+++++.+++ .+.++++|||+. ++|.+.+....                           
T Consensus        48 ~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~~v~e~~~~~~l~~~~~~~~---------------------------   99 (263)
T cd06625          48 VNALECEIQLLKNLQHERIVQYYGCLRD-DETLSIFMEYMPGGSVKDQLKAYG---------------------------   99 (263)
T ss_pred             HHHHHHHHHHHHhCCCCCeeeeEEEEcc-CCeEEEEEEECCCCcHHHHHHHhC---------------------------
Confidence            4678999999999999999999998774 679999999995 69999987432                           


Q ss_pred             CCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          94 RPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        94 ~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                              .+++..++.++.||+.|| .|||+..    .+-|+++++
T Consensus       100 --------~~~~~~~~~~~~~l~~~l-~~lH~~~i~H~dl~p~nilv  137 (263)
T cd06625         100 --------ALTETVTRKYTRQILEGV-EYLHSNMIVHRDIKGANILR  137 (263)
T ss_pred             --------CCCHHHHHHHHHHHHHHH-HHHHhCCeecCCCCHHHEEE
Confidence                    478889999999999999 9999754    344777654

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.22  E-value=8.7e-11  Score=91.16  Aligned_cols=85  Identities=13%  Similarity=0.160  Sum_probs=71.2

Q ss_pred             HHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSAS   93 (138)
Q Consensus        15 ~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (138)
                      .+.+++|+..|.+++||||++++..+++ .+.+++||||+. ++|.+++....                           
T Consensus        50 ~~~~~~e~~~l~~~~h~~ii~~~~~~~~-~~~~~iv~e~~~~~~L~~~~~~~~---------------------------  101 (267)
T cd06646          50 FSLIQQEIFMVKECKHCNIVAYFGSYLS-REKLWICMEYCGGGSLQDIYHVTG---------------------------  101 (267)
T ss_pred             HHHHHHHHHHHHhcCCCCeeeeeEEEEe-CCEEEEEEeCCCCCcHHHHHHhcC---------------------------
Confidence            4578999999999999999999998764 678999999996 69999886432                           


Q ss_pred             CCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          94 RPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        94 ~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                              .+++.++..++.|+++|| +|||+..    .+-|++|.+
T Consensus       102 --------~~~~~~~~~~~~qi~~~l-~~lH~~~i~H~dl~p~nill  139 (267)
T cd06646         102 --------PLSELQIAYVCRETLQGL-AYLHSKGKMHRDIKGANILL  139 (267)
T ss_pred             --------CCCHHHHHHHHHHHHHHH-HHHHHCCccccCCCHHHEEE
Confidence                    578899999999999999 9999864    344777654

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.22  E-value=1.1e-10  Score=91.13  Aligned_cols=89  Identities=16%  Similarity=0.166  Sum_probs=72.9

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      +...+.+.+|+..|++++||||+++++.+. +.+.+++||||+. ++|.+++....                        
T Consensus        46 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~------------------------  100 (267)
T cd05066          46 EKQRRDFLSEASIMGQFDHPNIIHLEGVVT-KSKPVMIVTEYMENGSLDAFLRKHD------------------------  100 (267)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCcceEEEEEe-cCCccEEEEEcCCCCCHHHHHHhcC------------------------
Confidence            445577899999999999999999999665 5678999999995 69999997432                        


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                ..+++.++..++.||+.|| .|||+..    .+.|+++.+
T Consensus       101 ----------~~~~~~~~~~i~~~i~~~l-~~lH~~~i~h~dlkp~nili  139 (267)
T cd05066         101 ----------GQFTVIQLVGMLRGIASGM-KYLSDMGYVHRDLAARNILV  139 (267)
T ss_pred             ----------CCCCHHHHHHHHHHHHHHH-HHHHHCCEeehhhchhcEEE
Confidence                      1478889999999999999 9999865    344777654

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.22  E-value=8.2e-11  Score=91.01  Aligned_cols=85  Identities=16%  Similarity=0.074  Sum_probs=70.6

Q ss_pred             HHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          16 EILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASR   94 (138)
Q Consensus        16 e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (138)
                      +.+.+|+..|++++||||+++++.++ .++.+++||||+. ++|.+++....                            
T Consensus        44 ~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~iv~e~~~~~~L~~~~~~~~----------------------------   94 (256)
T cd05114          44 EDFIEEAKVMMKLSHPKLVQLYGVCT-QQKPLYIVTEFMENGCLLNYLRQRQ----------------------------   94 (256)
T ss_pred             HHHHHHHHHHHHCCCCCceeEEEEEc-cCCCEEEEEEcCCCCcHHHHHHhCc----------------------------
Confidence            56788999999999999999999665 4678999999995 79999887421                            


Q ss_pred             CcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          95 PTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        95 ~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                            ..+++..++.++.||++|| .|||+..    .+-|+++++
T Consensus        95 ------~~~~~~~~~~~~~~i~~~l-~~lH~~~i~H~dl~p~ni~i  133 (256)
T cd05114          95 ------GKLSKDMLLSMCQDVCEGM-EYLERNSFIHRDLAARNCLV  133 (256)
T ss_pred             ------cCCCHHHHHHHHHHHHHHH-HHHHHCCccccccCcceEEE
Confidence                  1478889999999999999 9999765    344888765

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.22  E-value=1.3e-10  Score=90.63  Aligned_cols=97  Identities=10%  Similarity=0.034  Sum_probs=75.1

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      +...+.+++|+.+|++++||||++++..+. ..+..++||||+. ++|.+++.......                     
T Consensus        49 ~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~i~~~~~~~---------------------  106 (275)
T cd05046          49 ENLQSEFRRELDMFRKLSHKNVVRLLGLCR-EAEPHYMILEYTDLGDLKQFLRATKSKD---------------------  106 (275)
T ss_pred             hHHHHHHHHHHHHHHhcCCcceeeeEEEEC-CCCcceEEEEecCCCcHHHHHHhccccc---------------------
Confidence            346788999999999999999999999665 4678999999996 79999997543110                     


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                           ...+...+++.++..++.||++|| +|||+..    .+-|++|.+
T Consensus       107 -----~~~~~~~l~~~~~~~~~~~l~~~l-~~LH~~~i~H~dlkp~Nili  150 (275)
T cd05046         107 -----EKLKPPPLSTKQKVALCTQIALGM-DHLSNARFVHRDLAARNCLV  150 (275)
T ss_pred             -----ccccccCCCHHHHHHHHHHHHHHH-HHhhhcCcccCcCccceEEE
Confidence                 000112588999999999999999 9999764    334777664

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.22  E-value=7.2e-11  Score=94.42  Aligned_cols=94  Identities=13%  Similarity=0.129  Sum_probs=73.3

Q ss_pred             HHHHHHHHHhhhCCCCCeeEEeceeee-cCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          16 EILRLGVKQLEVYRHPKILSVLHPIEE-CPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASR   94 (138)
Q Consensus        16 e~lrrEi~~L~rLrHPnIL~l~e~~ee-~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (138)
                      ..+.+|+.+|++|+||||+++++.+.+ +...++++|||+.++|.+++.......                         
T Consensus        43 ~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~-------------------------   97 (317)
T cd07868          43 MSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASK-------------------------   97 (317)
T ss_pred             HHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccCCCHHHHHHhccccc-------------------------
Confidence            456889999999999999999997754 345799999999999999987543210                         


Q ss_pred             CcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          95 PTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        95 ~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                       ...+...+++.+++.++.||++|| +|||+..    .+.|++|.+
T Consensus        98 -~~~~~~~l~~~~~~~i~~qi~~al-~~LH~~~ivHrDlkp~Nil~  141 (317)
T cd07868          98 -ANKKPVQLPRGMVKSLLYQILDGI-HYLHANWVLHRDLKPANILV  141 (317)
T ss_pred             -ccCCcccCCHHHHHHHHHHHHHHH-HHHHhCCEEcCCCCHHHEEE
Confidence             001123589999999999999999 9999864    445887765

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.22  E-value=9.9e-11  Score=90.86  Aligned_cols=86  Identities=14%  Similarity=0.136  Sum_probs=71.5

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ..+.+++|+.+|++++||||+++++.+.+ .+.+++||||+. ++|.+++....                          
T Consensus        49 ~~~~~~~e~~~~~~l~h~~ii~~~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~--------------------------  101 (267)
T cd06645          49 DFAVVQQEIIMMKDCKHSNIVAYFGSYLR-RDKLWICMEFCGGGSLQDIYHVTG--------------------------  101 (267)
T ss_pred             HHHHHHHHHHHHHhCCCCCeeeEEEEEEe-CCEEEEEEeccCCCcHHHHHHhcC--------------------------
Confidence            34667899999999999999999997764 678999999996 69999986432                          


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                               .+++.+++..+.||+.|| .|||+..    .+-|+++.+
T Consensus       102 ---------~~~~~~~~~~~~~i~~~l-~~lH~~~i~H~dlkp~nili  139 (267)
T cd06645         102 ---------PLSESQIAYVSRETLQGL-YYLHSKGKMHRDIKGANILL  139 (267)
T ss_pred             ---------CCCHHHHHHHHHHHHHHH-HHHHHCCeecCCCCHHHEEE
Confidence                     588999999999999999 9999864    334666653

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>KOG0581|consensus

Probab=99.21  E-value=5.8e-11  Score=101.87  Aligned_cols=89  Identities=15%  Similarity=0.117  Sum_probs=76.1

Q ss_pred             cchHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          10 RKETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPA   88 (138)
Q Consensus        10 ~~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (138)
                      .++++.+++-||+++|.+..||+||.+|+.|....+.++|+|||+. |||.++++..+                      
T Consensus       116 ~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYMDgGSLd~~~k~~g----------------------  173 (364)
T KOG0581|consen  116 IDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYMDGGSLDDILKRVG----------------------  173 (364)
T ss_pred             CCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhcCCCCHHHHHhhcC----------------------
Confidence            4567889999999999999999999999998853336999999995 79999998542                      


Q ss_pred             CCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCCCc-----ccCcc
Q psy3822          89 NQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPSTY-----LPSSV  134 (138)
Q Consensus        89 ~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a~~-----~~~~~  134 (138)
                                   +++|..+.....||++|| .|||+.-+.     .|+++
T Consensus       174 -------------~i~E~~L~~ia~~VL~GL-~YLh~~~~IIHRDIKPsNl  210 (364)
T KOG0581|consen  174 -------------RIPEPVLGKIARAVLRGL-SYLHEERKIIHRDIKPSNL  210 (364)
T ss_pred             -------------CCCHHHHHHHHHHHHHHH-HHHhhccCeeeccCCHHHe
Confidence                         689999999999999999 999985544     37765

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.21  E-value=5e-11  Score=96.54  Aligned_cols=87  Identities=13%  Similarity=0.148  Sum_probs=73.3

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      ...+.+++|+.+|.+++||||+++++.+++ .+.+++||||+. ++|.+++....                         
T Consensus        43 ~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~-------------------------   96 (350)
T cd05573          43 NQIAHVRAERDILADADSPWIVKLYYSFQD-EEHLYLVMEYMPGGDLMNLLIRKD-------------------------   96 (350)
T ss_pred             cHHHHHHHHHHHHHhcCCCCccchhhheec-CCeEEEEEcCCCCCCHHHHHHHcC-------------------------
Confidence            345678999999999999999999997764 678999999995 69999997432                         


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                .+++.+++.++.||+.|| +|||+..    .+.|++|.+
T Consensus        97 ----------~l~~~~~~~i~~qi~~aL-~~LH~~giiH~Dlkp~NIll  134 (350)
T cd05573          97 ----------VFPEETARFYIAELVLAL-DSVHKLGFIHRDIKPDNILI  134 (350)
T ss_pred             ----------CCCHHHHHHHHHHHHHHH-HHHHHCCeeccCCCHHHeEE
Confidence                      588899999999999999 9999843    445777765

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.21  E-value=5.7e-11  Score=98.13  Aligned_cols=87  Identities=18%  Similarity=0.222  Sum_probs=71.9

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecCC-----eEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECPD-----ALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPP   87 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~-----~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~   87 (138)
                      ...+.+.+|+.+|++|+||||+++++.++. .+     .+|+||||+.++|.+.+...                      
T Consensus        41 ~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~~~~~~~~lv~e~~~~~l~~~~~~~----------------------   97 (372)
T cd07853          41 VSCKRVFRELKMLCFFKHDNVLSALDILQP-PHIDPFEEIYVVTELMQSDLHKIIVSP----------------------   97 (372)
T ss_pred             HHHHHHHHHHHHHHhCCCCCcCCHhheecC-CCccccceEEEEeeccccCHHHHHhcC----------------------
Confidence            345678899999999999999999997764 44     79999999998998888632                      


Q ss_pred             CCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          88 ANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        88 ~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                   ..+++.+++.++.||++|| +|||+..    .+.|++|.+
T Consensus        98 -------------~~l~~~~~~~~~~qi~~aL-~~LH~~~ivH~dlkp~Nili  136 (372)
T cd07853          98 -------------QPLSSDHVKVFLYQILRGL-KYLHSAGILHRDIKPGNLLV  136 (372)
T ss_pred             -------------CCCCHHHHHHHHHHHHHHH-HHHHhCCeeCCCCChHHEEE
Confidence                         1588999999999999999 9999864    445777764

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.21  E-value=1.1e-10  Score=90.52  Aligned_cols=88  Identities=20%  Similarity=0.141  Sum_probs=73.0

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      +...+.+++|+..|++++||||+++++.+.+ .+.+++||||+. ++|.+++.+..                        
T Consensus        43 ~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~------------------------   97 (265)
T cd06631          43 EKEYEKLQEEVDLLKSLKHVNIVQYLGTCLD-DNTISIFMEFVPGGSISSILNRFG------------------------   97 (265)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCEeeEeeEeec-CCeEEEEEecCCCCcHHHHHHhcC------------------------
Confidence            3445778999999999999999999997765 679999999995 69999997432                        


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                 .+++..++.++.||+.|| +|||+..    .+-|+++++
T Consensus        98 -----------~~~~~~~~~~~~qi~~~l-~~lH~~~i~H~dl~p~nil~  135 (265)
T cd06631          98 -----------PLPEPVFCKYTKQILDGV-AYLHNNCVVHRDIKGNNVML  135 (265)
T ss_pred             -----------CCCHHHHHHHHHHHHHHH-HHHHhCCcccCCcCHHhEEE
Confidence                       478889999999999999 9999855    344777664

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.21  E-value=1.2e-10  Score=90.75  Aligned_cols=90  Identities=14%  Similarity=0.158  Sum_probs=73.2

Q ss_pred             chHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          11 KETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPAN   89 (138)
Q Consensus        11 ~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (138)
                      .+...+.+++|+..|++++||||+++++.+. +.+.+++||||+. ++|.+++....                       
T Consensus        45 ~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~-----------------------  100 (269)
T cd05065          45 TEKQRRDFLSEASIMGQFDHPNIIHLEGVVT-KSRPVMIITEFMENGALDSFLRQND-----------------------  100 (269)
T ss_pred             CHHHHHHHHHHHHHHHhCCCcCcceEEEEEC-CCCceEEEEecCCCCcHHHHHhhCC-----------------------
Confidence            3455678899999999999999999999765 4678999999996 69999987432                       


Q ss_pred             CCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          90 QSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        90 ~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                 ..+++.++..++.|++.|| .|||+..    .+.|+++.+
T Consensus       101 -----------~~~~~~~~~~i~~~l~~al-~~lH~~g~~H~dl~p~nili  139 (269)
T cd05065         101 -----------GQFTVIQLVGMLRGIAAGM-KYLSEMNYVHRDLAARNILV  139 (269)
T ss_pred             -----------CCCCHHHHHHHHHHHHHHH-HHHHHCCEeecccChheEEE
Confidence                       1478889999999999999 9999865    334777653

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.21  E-value=1.4e-10  Score=91.70  Aligned_cols=87  Identities=11%  Similarity=-0.044  Sum_probs=69.9

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ....+.+|+.+|++++||||+++++...+ .+..++||||+. ++|.+++....                          
T Consensus        59 ~~~~~~~~~~~~~~l~h~niv~~~~~~~~-~~~~~lv~ey~~~g~L~~~l~~~~--------------------------  111 (274)
T cd05076          59 IALAFFETASLMSQVSHIHLAFVHGVCVR-GSENIMVEEFVEHGPLDVCLRKEK--------------------------  111 (274)
T ss_pred             HHHHHHHHHHHHhcCCCCCeeeEEEEEEe-CCceEEEEecCCCCcHHHHHHhcC--------------------------
Confidence            34567889999999999999999997664 668999999996 68988886422                          


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                              ..+++..+..++.||++|| +|||+..    .+.|++|.+
T Consensus       112 --------~~~~~~~~~~i~~qi~~~l-~~lH~~~iiH~dlkp~Nill  150 (274)
T cd05076         112 --------GRVPVAWKITVAQQLASAL-SYLEDKNLVHGNVCAKNILL  150 (274)
T ss_pred             --------CCCCHHHHHHHHHHHHHHH-HHHHcCCccCCCCCcccEEE
Confidence                    1477888899999999999 9999764    334777653

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.21  E-value=1.1e-10  Score=90.94  Aligned_cols=93  Identities=13%  Similarity=0.057  Sum_probs=72.1

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      +.....+.+|+..+++++||||+++++.+.+ .+.+++||||+. ++|.+++.......                     
T Consensus        36 ~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~---------------------   93 (269)
T cd05042          36 PDEQLLFLQEVQPYRELNHPNVLQCLGQCIE-SIPYLLVLEFCPLGDLKNYLRSNRGMV---------------------   93 (269)
T ss_pred             hHHHHHHHHHHHHHHhCCCCCcceEEEEECC-CCceEEEEEeCCCCcHHHHHHhccccc---------------------
Confidence            3445667889999999999999999997764 678999999995 69999997543110                     


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                               ...+++..+..++.||+.|| +|||+..    .+.|+++++
T Consensus        94 ---------~~~~~~~~~~~~~~qi~~~l-~~lH~~~ivH~dlkp~Nill  133 (269)
T cd05042          94 ---------AQMAQKDVLQRMACEVASGL-LWLHQADFIHSDLALRNCQL  133 (269)
T ss_pred             ---------cccccHHHHHHHHHHHHHHH-HHHHhcCEecccccHhheEe
Confidence                     11356677889999999999 9999865    344777654

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.21  E-value=1.4e-10  Score=91.08  Aligned_cols=89  Identities=10%  Similarity=-0.032  Sum_probs=72.3

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      +.....+.+|+..|.+++||||+++++.+. ++...+++|||+. ++|..++..+.                        
T Consensus        45 ~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~-~~~~~~lv~e~~~~~~l~~~~~~~~------------------------   99 (262)
T cd05077          45 RDISLAFFETASMMRQVSHKHIVLLYGVCV-RDVENIMVEEFVEFGPLDLFMHRKS------------------------   99 (262)
T ss_pred             hhHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCCCCEEEEecccCCCHHHHHHhcC------------------------
Confidence            345567889999999999999999999765 4667899999996 68888776432                        


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                ..+++..+..++.||++|| +|||+..    .+.|++|.+
T Consensus       100 ----------~~~~~~~~~~i~~qi~~~l-~~lH~~~ivH~dlkp~Nill  138 (262)
T cd05077         100 ----------DVLTTPWKFKVAKQLASAL-SYLEDKDLVHGNVCTKNILL  138 (262)
T ss_pred             ----------CCCCHHHHHHHHHHHHHHH-HHhhhCCeECCCCCcccEEE
Confidence                      1588889999999999999 9999754    345888776

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.21  E-value=6.9e-11  Score=92.25  Aligned_cols=89  Identities=18%  Similarity=0.147  Sum_probs=71.8

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      +...+.+++|++.|++++||||+++++.+.+ ++.+++||||+.+++.+.+..+.                         
T Consensus        41 ~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~iv~e~~~~~~l~~~~~~~-------------------------   94 (288)
T cd07833          41 EDVKKTALREVKVLRQLRHENIVNLKEAFRR-KGRLYLVFEYVERTLLELLEASP-------------------------   94 (288)
T ss_pred             ccchhHHHHHHHHHHhcCCCCeeehhheEEE-CCEEEEEEecCCCCHHHHHHhcC-------------------------
Confidence            4456788999999999999999999998875 77899999999876655554321                         


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                               ..+++.+++.++.||+.|| .|||+..    .+-|++|++
T Consensus        95 ---------~~~~~~~~~~~~~~i~~~l-~~LH~~~i~H~dl~~~ni~~  133 (288)
T cd07833          95 ---------GGLPPDAVRSYIWQLLQAI-AYCHSHNIIHRDIKPENILV  133 (288)
T ss_pred             ---------CCCCHHHHHHHHHHHHHHH-HHHHHCCeecCCCCHHHeEE
Confidence                     1578899999999999999 9999864    334776665

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>KOG0582|consensus

Probab=99.21  E-value=5.1e-11  Score=105.05  Aligned_cols=80  Identities=18%  Similarity=0.122  Sum_probs=70.9

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccc-cccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPV-YASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V-~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      -++.|++|++.|.-++|||||++++.|.- +..||.||-|+ .||+.++++..-.                         
T Consensus        67 ~ld~l~kE~~~msl~~HPNIv~~~~sFvv-~~~LWvVmpfMa~GS~ldIik~~~~-------------------------  120 (516)
T KOG0582|consen   67 DLDALRKEVQTMSLIDHPNIVTYHCSFVV-DSELWVVMPFMAGGSLLDIIKTYYP-------------------------  120 (516)
T ss_pred             hHHHHHHHHHHhhhcCCCCcceEEEEEEe-cceeEEeehhhcCCcHHHHHHHHcc-------------------------
Confidence            37899999999999999999999999985 67899999999 4899999985421                         


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCCC
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPST  128 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a~  128 (138)
                              -.|+|.-|+.++.++++|| .|||.+..
T Consensus       121 --------~Gl~E~~Ia~iLre~LkaL-~YLH~~G~  147 (516)
T KOG0582|consen  121 --------DGLEEASIATILREVLKAL-DYLHQNGH  147 (516)
T ss_pred             --------ccccHHHHHHHHHHHHHHH-HHHHhcCc
Confidence                    1499999999999999999 99999874

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.21  E-value=4.6e-11  Score=91.23  Aligned_cols=87  Identities=14%  Similarity=0.130  Sum_probs=72.5

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      ...+.+++|+.+|++++||||+++++.++ +.+.+|++|||+. ++|.+++....                         
T Consensus        35 ~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~-------------------------   88 (265)
T cd05579          35 NQVDQVLTERDILSQAQSPYVVKLYYSFQ-GKKNLYLVMEYLPGGDLASLLENVG-------------------------   88 (265)
T ss_pred             hHHHHHHHHHHHHHhCCCcchhHHHHhee-cCcEEEEEEecCCCCcHHHHHHHcC-------------------------
Confidence            45678899999999999999999999776 4778999999995 69999997432                         


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                .+++.++..++.||++|| +|||+..    .+-|++|++
T Consensus        89 ----------~~~~~~~~~i~~qi~~~L-~~lH~~~i~H~di~~~nil~  126 (265)
T cd05579          89 ----------SLDEDVARIYIAEIVLAL-EYLHSNGIIHRDLKPDNILI  126 (265)
T ss_pred             ----------CCCHHHHHHHHHHHHHHH-HHHHHcCeecCCCCHHHeEE
Confidence                      578899999999999999 9999754    233666553

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.20  E-value=1e-10  Score=92.47  Aligned_cols=93  Identities=15%  Similarity=0.119  Sum_probs=73.1

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeee-cCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEE-CPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee-~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      ...+.+.+|+++|++|+||||+.+++.+.+ ..+.+++||||+. ++|.+++.....                       
T Consensus        41 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-----------------------   97 (287)
T cd06621          41 DLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAMEYCEGGSLDSIYKKVKK-----------------------   97 (287)
T ss_pred             HHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEEecCCCCHHHHHHHHHh-----------------------
Confidence            455778999999999999999999987643 3458999999995 699998874321                       


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcceee
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAFC  137 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~~  137 (138)
                              +...+++..+..++.||+.|| .|||+..    .+-|++|.++
T Consensus        98 --------~~~~l~~~~~~~i~~~i~~~L-~~lH~~~i~H~dl~~~nil~~  139 (287)
T cd06621          98 --------RGGRIGEKVLGKIAESVLKGL-SYLHSRKIIHRDIKPSNILLT  139 (287)
T ss_pred             --------cCCCCCHHHHHHHHHHHHHHH-HHHHHCCcccCCCCHHHEEEe
Confidence                    112588899999999999999 9999754    3447776653

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.20  E-value=1e-10  Score=94.59  Aligned_cols=88  Identities=16%  Similarity=0.113  Sum_probs=74.0

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccc-cccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPV-YASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V-~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      ...+.+++|+.+|.+++||||+++++.+++ .+.+++||||+ .++|.+++....                         
T Consensus        43 ~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~-------------------------   96 (330)
T cd05601          43 ETVSFFEEERDILSISNSPWIPQLQYAFQD-KDNLYLVMEYQPGGDLLSLLNRYE-------------------------   96 (330)
T ss_pred             hHHHHHHHHHHHHHhCCCCCCcceeeEEec-CCeEEEEECCCCCCCHHHHHHHhc-------------------------
Confidence            356788999999999999999999997764 67899999999 479999997542                         


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                               ..+++..++.++.||++|| .|||+..    .+.|++|.+
T Consensus        97 ---------~~l~~~~~~~~~~qi~~aL-~~lH~~~i~H~Dlkp~NIll  135 (330)
T cd05601          97 ---------DQFDEDMAQFYLAELVLAI-HSVHQMGYVHRDIKPENVLI  135 (330)
T ss_pred             ---------CCCCHHHHHHHHHHHHHHH-HHHHHCCeEcccCchHheEE
Confidence                     1588999999999999999 9999854    445777765

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.20  E-value=7.1e-11  Score=92.54  Aligned_cols=88  Identities=15%  Similarity=0.043  Sum_probs=73.4

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      +...+.+.+|+.+|++++||||+++++.++ +.+.+++||||+. ++|.+++...                         
T Consensus        43 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~-------------------------   96 (277)
T cd06642          43 EDEIEDIQQEITVLSQCDSPYITRYYGSYL-KGTKLWIIMEYLGGGSALDLLKPG-------------------------   96 (277)
T ss_pred             hHHHHHHHHHHHHHHcCCCCccHhhhcccc-cCCceEEEEEccCCCcHHHHhhcC-------------------------
Confidence            445678899999999999999999999776 4678999999996 6998887521                         


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcceee
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAFC  137 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~~  137 (138)
                                 .+++..++..+.||++|| .|||+..    .+-|++|.+.
T Consensus        97 -----------~~~~~~~~~~~~~i~~~l-~~lH~~~ivH~dl~p~ni~i~  135 (277)
T cd06642          97 -----------PLEETYIATILREILKGL-DYLHSERKIHRDIKAANVLLS  135 (277)
T ss_pred             -----------CCCHHHHHHHHHHHHHHH-HHHhcCCeeccCCChheEEEe
Confidence                       478889999999999999 9999864    4458887763

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.20  E-value=1.8e-10  Score=88.46  Aligned_cols=89  Identities=16%  Similarity=0.139  Sum_probs=74.2

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ..+.+++|+..|++++||||+++++.+++ .+.+++|||++. ++|.+++.....                         
T Consensus        42 ~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~iv~e~~~~~~l~~~~~~~~~-------------------------   95 (267)
T cd06610          42 SVDELRKEVQAMSQCNHPNVVKYYTSFVV-GDELWLVMPYLSGGSLLDIMKSSYP-------------------------   95 (267)
T ss_pred             HHHHHHHHHHHHHhcCCCCEEEEEEEEee-CCEEEEEEeccCCCcHHHHHHHhcc-------------------------
Confidence            56788999999999999999999998875 678999999995 699999975321                         


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                             ...+++..++.++.||++|| .|||+..    .+-|++|++
T Consensus        96 -------~~~~~~~~~~~~~~ql~~al-~~lh~~~i~h~~l~p~ni~~  135 (267)
T cd06610          96 -------RGGLDEAIIATVLKEVLKGL-EYLHSNGQIHRDIKAGNILL  135 (267)
T ss_pred             -------cCCCCHHHHHHHHHHHHHHH-HHHHhCCeecCCCCHHhEEE
Confidence                   01588999999999999999 9999754    345777765

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>KOG4717|consensus

Probab=99.20  E-value=5.5e-11  Score=107.23  Aligned_cols=97  Identities=21%  Similarity=0.188  Sum_probs=84.2

Q ss_pred             cCCCCcchHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccc-cccHHHHHhhcCCCCCCCCCCCCCCCCCC
Q psy3822           5 LHKPKRKETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPV-YASLASILAFQESPAPNHSTNPVTGGSGS   83 (138)
Q Consensus         5 ~~K~~~~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V-~~sL~~~L~~~~~~~~~~~~~~~~~~~~~   83 (138)
                      +.|.+..+.-.-.|-+|+.-|+-..|||||++||++ +|...||+|.|.= +|+|++++-+++.                
T Consensus        51 iDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEVi-DTQTKlyLiLELGD~GDl~DyImKHe~----------------  113 (864)
T KOG4717|consen   51 IDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVI-DTQTKLYLILELGDGGDLFDYIMKHEE----------------  113 (864)
T ss_pred             ecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehh-cccceEEEEEEecCCchHHHHHHhhhc----------------
Confidence            456677777788899999999999999999999966 5788999999987 4699999987652                


Q ss_pred             CCCCCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcC----CCCcccCcceee
Q psy3822          84 SPPPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYV----PSTYLPSSVAFC  137 (138)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~----~a~~~~~~~~~~  137 (138)
                                        .|.|.-.|++|.||+.|+ .|||.    +..+.|.+|+|.
T Consensus       114 ------------------Gl~E~La~kYF~QI~~AI-~YCHqLHVVHRDLKPENVVFF  152 (864)
T KOG4717|consen  114 ------------------GLNEDLAKKYFAQIVHAI-SYCHQLHVVHRDLKPENVVFF  152 (864)
T ss_pred             ------------------cccHHHHHHHHHHHHHHH-HHHhhhhhhcccCCcceeEEe
Confidence                              589999999999999999 99996    557889999984

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.20  E-value=1.9e-10  Score=88.70  Aligned_cols=89  Identities=16%  Similarity=0.100  Sum_probs=73.3

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      ...+.+++|+.+|++++||||+++++.++ +.+.+|++|||+. ++|.+.+....                         
T Consensus        40 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~l~~~~~~~~-------------------------   93 (255)
T cd08219          40 SAVEDSRKEAVLLAKMKHPNIVAFKESFE-ADGHLYIVMEYCDGGDLMQKIKLQR-------------------------   93 (255)
T ss_pred             HHHHHHHHHHHHHHhCCCCCcceEEEEEE-ECCEEEEEEeeCCCCcHHHHHHhcc-------------------------
Confidence            45678899999999999999999999776 4779999999995 69999886432                         


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                              ...+++..+..++.||+.|| .|||+..    .+-|+++.+
T Consensus        94 --------~~~~~~~~~~~~~~~i~~al-~~lH~~~i~H~dl~p~nili  133 (255)
T cd08219          94 --------GKLFPEDTILQWFVQMCLGV-QHIHEKRVLHRDIKSKNIFL  133 (255)
T ss_pred             --------CCCCCHHHHHHHHHHHHHHH-HHHhhCCcccCCCCcceEEE
Confidence                    12578889999999999999 9999854    445777765

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.20  E-value=7.3e-11  Score=93.02  Aligned_cols=88  Identities=14%  Similarity=0.135  Sum_probs=69.7

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeec-------CCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEEC-------PDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPP   86 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~-------~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~   86 (138)
                      ....+.+|+.+|++++||||+++++.+...       .+..++||||+.++|.+.+....                    
T Consensus        54 ~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~--------------------  113 (310)
T cd07865          54 FPITALREIKILQLLKHENVVNLIEICRTKATPYNRYKGSFYLVFEFCEHDLAGLLSNKN--------------------  113 (310)
T ss_pred             chhHHHHHHHHHHhCCCCCccceEEEEecccccccCCCceEEEEEcCCCcCHHHHHHhcc--------------------
Confidence            334567899999999999999999865432       23579999999999988886432                    


Q ss_pred             CCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          87 PANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        87 ~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                    ..+++.+++.++.||++|| +|||++.    .+.|++|.+
T Consensus       114 --------------~~~~~~~~~~i~~qi~~al-~~lH~~~i~H~dl~p~nil~  152 (310)
T cd07865         114 --------------VKFTLSEIKKVMKMLLNGL-YYIHRNKILHRDMKAANILI  152 (310)
T ss_pred             --------------cCCCHHHHHHHHHHHHHHH-HHHHHCCeeccCCCHHHEEE
Confidence                          2588999999999999999 9999875    334666654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.20  E-value=1.1e-10  Score=92.84  Aligned_cols=94  Identities=12%  Similarity=0.136  Sum_probs=73.4

Q ss_pred             HHHHHHHHHhhhCCCCCeeEEeceeee-cCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          16 EILRLGVKQLEVYRHPKILSVLHPIEE-CPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASR   94 (138)
Q Consensus        16 e~lrrEi~~L~rLrHPnIL~l~e~~ee-~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (138)
                      ..+.+|+.+|++|+||||+++++.+.. +...+++||||+.++|.+++.......                         
T Consensus        43 ~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~-------------------------   97 (317)
T cd07867          43 MSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAEHDLWHIIKFHRASK-------------------------   97 (317)
T ss_pred             HHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeCCcHHHHHHhhhccc-------------------------
Confidence            456899999999999999999997753 346899999999999999987543110                         


Q ss_pred             CcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          95 PTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        95 ~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                       ...+...+++..++.++.||++|| +|||+..    .+.|++|.+
T Consensus        98 -~~~~~~~l~~~~~~~i~~qi~~aL-~~lH~~~ivH~Dlkp~Nil~  141 (317)
T cd07867          98 -ANKKPMQLPRSMVKSLLYQILDGI-HYLHANWVLHRDLKPANILV  141 (317)
T ss_pred             -cCCCCccCCHHHHHHHHHHHHHHH-HHHHhCCEEcCCCCHHHEEE
Confidence             001123588999999999999999 9999854    445888776

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.20  E-value=9.2e-11  Score=95.67  Aligned_cols=88  Identities=13%  Similarity=0.059  Sum_probs=73.5

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      ...+.+++|+.+|.+++||||+++++.+++ .+.+|+||||+. ++|.+++.+..                         
T Consensus        43 ~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~~lv~e~~~g~~L~~~l~~~~-------------------------   96 (331)
T cd05597          43 AETACFREERDVLVNGDRRWITNLHYAFQD-ENNLYLVMDYYVGGDLLTLLSKFE-------------------------   96 (331)
T ss_pred             hhHHHHHHHHHHHHhCCCCCCCceEEEEec-CCeEEEEEecCCCCcHHHHHHHhc-------------------------
Confidence            345678999999999999999999998774 679999999994 79999997432                         


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                               ..++|.+++.++.||+.|| +|||+..    .+.|++|.+
T Consensus        97 ---------~~~~~~~~~~~~~qi~~~l-~~lH~~~ivH~dlkp~Nill  135 (331)
T cd05597          97 ---------DRLPEDMARFYLAEMVLAI-DSVHQLGYVHRDIKPDNVLL  135 (331)
T ss_pred             ---------CCCCHHHHHHHHHHHHHHH-HHHHhCCeEECCCCHHHEEE
Confidence                     1588999999999999999 9999865    445777755

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.20  E-value=1.4e-10  Score=88.88  Aligned_cols=90  Identities=11%  Similarity=0.000  Sum_probs=73.7

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      +...+.+.+|+..|++++||||+++++.+.+ .+.+++||||+. ++|.+++.....                       
T Consensus        40 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~-----------------------   95 (256)
T cd08529          40 RREREEAIDEARVLAKLDSSYIIRYYESFLD-KGKLNIVMEYAENGDLHKLLKMQRG-----------------------   95 (256)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCeehheeeecc-CCEEEEEEEeCCCCcHHHHHHHhcC-----------------------
Confidence            3445678999999999999999999997774 678999999995 699999975321                       


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                ..+++..+..++.||++|| .|||+..    .+-|++|++
T Consensus        96 ----------~~~~~~~~~~i~~~l~~al-~~lH~~~i~h~dl~~~nili  134 (256)
T cd08529          96 ----------RPLPEDQVWRFFIQILLGL-AHLHSKKILHRDIKSLNLFL  134 (256)
T ss_pred             ----------CCCCHHHHHHHHHHHHHHH-HHHHHCCcccCCCCcceEEE
Confidence                      2578889999999999999 9999754    344888765

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.20  E-value=1e-10  Score=92.22  Aligned_cols=86  Identities=14%  Similarity=0.116  Sum_probs=69.8

Q ss_pred             HHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASR   94 (138)
Q Consensus        15 ~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (138)
                      ...+.+|+..|++|+||||+++++.++ +.+..++||||+.++|.+.+....                            
T Consensus        47 ~~~~~~e~~~l~~l~h~ni~~~~~~~~-~~~~~~lv~e~~~~~l~~~~~~~~----------------------------   97 (291)
T cd07870          47 PFTAIREASLLKGLKHANIVLLHDIIH-TKETLTFVFEYMHTDLAQYMIQHP----------------------------   97 (291)
T ss_pred             cHHHHHHHHHHHhcCCCCEeEEEEEEe-cCCeEEEEEecccCCHHHHHHhCC----------------------------
Confidence            345678999999999999999999776 467899999999888888775322                            


Q ss_pred             CcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          95 PTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        95 ~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                            ..+.+.+++.++.||++|| .|||+..    .+.|++|.+
T Consensus        98 ------~~~~~~~~~~~~~qi~~~L-~~lH~~~i~H~dlkp~Nil~  136 (291)
T cd07870          98 ------GGLHPYNVRLFMFQLLRGL-AYIHGQHILHRDLKPQNLLI  136 (291)
T ss_pred             ------CCCCHHHHHHHHHHHHHHH-HHHHhCCcccCCCChHHEEE
Confidence                  1467788999999999999 9999864    344777765

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.20  E-value=9.3e-11  Score=89.80  Aligned_cols=86  Identities=22%  Similarity=0.213  Sum_probs=72.8

Q ss_pred             HHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccccc-cHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYA-SLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSAS   93 (138)
Q Consensus        15 ~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~~-sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (138)
                      .....+|+..+++|+||||+++++...+ .+.++++||++.+ +|.++|....                           
T Consensus        42 ~~~~~~e~~~~~~l~~~~i~~~~~~~~~-~~~~~~v~~~~~~~~L~~~l~~~~---------------------------   93 (260)
T PF00069_consen   42 REENIREIKILRRLRHPNIVQILDVFQD-DNYLYIVMEYCPGGSLQDYLQKNK---------------------------   93 (260)
T ss_dssp             HHHHHHHHHHHHHHTBTTBCHEEEEEEE-SSEEEEEEEEETTEBHHHHHHHHS---------------------------
T ss_pred             cchhhhhhhccccccccccccccccccc-cccccccccccccccccccccccc---------------------------
Confidence            3445679999999999999999997765 7789999999976 9999998332                           


Q ss_pred             CCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcceee
Q psy3822          94 RPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAFC  137 (138)
Q Consensus        94 ~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~~  137 (138)
                              .+++.++...+.||++|| .|||+..    .+-|++|.++
T Consensus        94 --------~~~~~~~~~~~~qi~~~L-~~Lh~~~i~H~dikp~NIl~~  132 (260)
T PF00069_consen   94 --------PLSEEEILKIAYQILEAL-AYLHSKGIVHRDIKPENILLD  132 (260)
T ss_dssp             --------SBBHHHHHHHHHHHHHHH-HHHHHTTEEESSBSGGGEEES
T ss_pred             --------cccccccccccccccccc-ccccccccccccccccccccc
Confidence                    589999999999999999 9999864    3458888775

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.19  E-value=7.7e-11  Score=99.62  Aligned_cols=84  Identities=13%  Similarity=0.040  Sum_probs=70.8

Q ss_pred             HHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          16 EILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASRP   95 (138)
Q Consensus        16 e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   95 (138)
                      +.+.+|+.+|++|+||||+++++.+. ..+..++|||++.++|...+....                             
T Consensus       128 ~~~~~E~~il~~l~HpnIv~~~~~~~-~~~~~~lv~e~~~~~L~~~l~~~~-----------------------------  177 (391)
T PHA03212        128 GGTATEAHILRAINHPSIIQLKGTFT-YNKFTCLILPRYKTDLYCYLAAKR-----------------------------  177 (391)
T ss_pred             hhhHHHHHHHHhCCCCCCCCEeEEEE-ECCeeEEEEecCCCCHHHHHHhcC-----------------------------
Confidence            45679999999999999999999776 467899999999999988886432                             


Q ss_pred             cccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          96 THAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        96 ~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                            .+++.+++.++.||++|| +|||+..    .+.|++|.+
T Consensus       178 ------~l~~~~~~~i~~qi~~aL-~ylH~~~IvHrDiKP~NIll  215 (391)
T PHA03212        178 ------NIAICDILAIERSVLRAI-QYLHENRIIHRDIKAENIFI  215 (391)
T ss_pred             ------CCCHHHHHHHHHHHHHHH-HHHHhCCcccCCCChHhEEE
Confidence                  477889999999999999 9999864    345888764

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.19  E-value=1.8e-10  Score=91.46  Aligned_cols=101  Identities=17%  Similarity=0.150  Sum_probs=75.5

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      ....+.+.+|+++|.+|+||||+++++.+. ..+.+++||||+. ++|.+++........                    
T Consensus        58 ~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~--------------------  116 (295)
T cd05097          58 KTARNDFLKEIKIMSRLKNPNIIRLLGVCV-SDDPLCMITEYMENGDLNQFLSQREIEST--------------------  116 (295)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCcCeEEEEEc-CCCccEEEEecCCCCcHHHHHHhcccccc--------------------
Confidence            445577899999999999999999999765 4678999999995 699999975431100                    


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcceee
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAFC  137 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~~  137 (138)
                         -........+++.++..++.||+.|| +|||+..    .+.|++|++.
T Consensus       117 ---~~~~~~~~~~~~~~~~~i~~~i~~al-~~lH~~~i~H~dlkp~Nill~  163 (295)
T cd05097         117 ---FTHANNIPSVSIANLLYMAVQIASGM-KYLASLNFVHRDLATRNCLVG  163 (295)
T ss_pred             ---ccccccCCcccHHHHHHHHHHHHHHH-HHHHhcCeeccccChhhEEEc
Confidence               00000111477888999999999999 9999865    4458888763

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.19  E-value=1.9e-10  Score=90.32  Aligned_cols=88  Identities=15%  Similarity=0.103  Sum_probs=73.3

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      +...+.+.+|+..|++++||||+++++.+++ .+.+++||||+. ++|.+++...                         
T Consensus        43 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~i~~~-------------------------   96 (277)
T cd06640          43 EDEIEDIQQEITVLSQCDSPYVTKYYGSYLK-GTKLWIIMEYLGGGSALDLLRAG-------------------------   96 (277)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE-CCEEEEEEecCCCCcHHHHHhcC-------------------------
Confidence            3456788999999999999999999998775 679999999995 6999988621                         


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcceee
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAFC  137 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~~  137 (138)
                                 .+++.++..++.|+++|| +|||+..    .+-|++++++
T Consensus        97 -----------~l~~~~~~~~~~~l~~~l-~~lh~~~ivH~dl~p~Nil~~  135 (277)
T cd06640          97 -----------PFDEFQIATMLKEILKGL-DYLHSEKKIHRDIKAANVLLS  135 (277)
T ss_pred             -----------CCCHHHHHHHHHHHHHHH-HHHHhCCccCcCCChhhEEEc
Confidence                       477889999999999999 9999754    3458887654

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.19  E-value=1.7e-10  Score=89.66  Aligned_cols=88  Identities=13%  Similarity=0.076  Sum_probs=72.3

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeec-CCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEEC-PDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~-~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      ...+.+++|+.+|++|+||||+++++.+.+. .+.++++|||+. ++|.+++....                        
T Consensus        46 ~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~------------------------  101 (265)
T cd06652          46 KEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTLSIFMEHMPGGSIKDQLKSYG------------------------  101 (265)
T ss_pred             HHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceEEEEEEecCCCcHHHHHHHcC------------------------
Confidence            4567889999999999999999999977654 357999999995 69999987432                        


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                 .+++.++..++.||+.|| +|||+..    .+-|++|.+
T Consensus       102 -----------~~~~~~~~~~~~~l~~~l-~~lH~~~i~H~dl~p~nil~  139 (265)
T cd06652         102 -----------ALTENVTRKYTRQILEGV-SYLHSNMIVHRDIKGANILR  139 (265)
T ss_pred             -----------CCCHHHHHHHHHHHHHHH-HHHHhCCEecCCCCHHHEEe
Confidence                       477888999999999999 9999765    344777665

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.19  E-value=2.1e-10  Score=89.19  Aligned_cols=89  Identities=13%  Similarity=0.126  Sum_probs=72.7

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      +...+.+.+|+..|++++||||+++++.+++ .+.++++|||+. ++|.+++....                        
T Consensus        46 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~iv~e~~~~~~L~~~~~~~~------------------------  100 (266)
T cd05033          46 DKQRLDFLTEASIMGQFDHPNIIRLEGVVTK-SRPVMIITEYMENGSLDKFLREND------------------------  100 (266)
T ss_pred             hHHHHHHHHHHHHHHhCCCCCcceEeEEEec-CCceEEEEEcCCCCCHHHHHHhcc------------------------
Confidence            4445667889999999999999999997764 678999999995 69999997432                        


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                ..+++.++..++.|++.|| +|||+..    .+.|+++..
T Consensus       101 ----------~~~~~~~~~~~~~~l~~~l-~~Lh~~~i~H~di~p~nili  139 (266)
T cd05033         101 ----------GKFTVGQLVGMLRGIASGM-KYLSEMNYVHRDLAARNILV  139 (266)
T ss_pred             ----------CCCCHHHHHHHHHHHHHHH-HHHHhCCcccCCCCcceEEE
Confidence                      1578889999999999999 9999854    345777664

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.19  E-value=1.4e-10  Score=90.38  Aligned_cols=88  Identities=18%  Similarity=0.207  Sum_probs=71.9

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      ....+.+.+|+.+|++++||||+++++.+++  +..++||||+. ++|.+++....                        
T Consensus        48 ~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~------------------------  101 (270)
T cd05056          48 PSVREKFLQEAYIMRQFDHPHIVKLIGVITE--NPVWIVMELAPLGELRSYLQVNK------------------------  101 (270)
T ss_pred             HHHHHHHHHHHHHHHhCCCCchhceeEEEcC--CCcEEEEEcCCCCcHHHHHHhCC------------------------
Confidence            4456788999999999999999999996653  46889999995 79999997432                        


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                ..+++..+..++.||+.|| +|||+..    .+-|+++..
T Consensus       102 ----------~~~~~~~~~~~~~~l~~~l-~~lH~~~~~H~dl~p~nili  140 (270)
T cd05056         102 ----------YSLDLASLILYSYQLSTAL-AYLESKRFVHRDIAARNVLV  140 (270)
T ss_pred             ----------CCCCHHHHHHHHHHHHHHH-HHHHhCCeeccccChheEEE
Confidence                      1478889999999999999 9999864    344887765

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.19  E-value=2.2e-10  Score=89.57  Aligned_cols=105  Identities=11%  Similarity=0.083  Sum_probs=77.0

Q ss_pred             chHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          11 KETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPAN   89 (138)
Q Consensus        11 ~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (138)
                      .....+.+++|+..|.+++||||+++++.+. ..+..+++|||+. ++|.+++........              .....
T Consensus        48 ~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~-~~~~~~~~~e~~~~~~L~~~l~~~~~~~~--------------~~~~~  112 (283)
T cd05048          48 EPKVQQEFRQEAELMSDLQHPNIVCLLGVCT-KEQPTCMLFEYLAHGDLHEFLVRNSPHSD--------------VGAES  112 (283)
T ss_pred             CHHHHHHHHHHHHHHHhcCCcccceEEEEEc-CCCceEEEEecCCCCcHHHHHHhcCCCcc--------------ccccc
Confidence            3455677899999999999999999999765 4568999999995 799999975422100              00000


Q ss_pred             CCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          90 QSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        90 ~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                           ........+++.++..++.||++|| .|||+..    .+.|++|++
T Consensus       113 -----~~~~~~~~l~~~~~~~~~~~l~~al-~~lH~~~i~H~dlkp~Nil~  157 (283)
T cd05048         113 -----GDETVKSSLDCSDFLHIAIQIAAGM-EYLSSHHFVHRDLAARNCLV  157 (283)
T ss_pred             -----ccccccCCCCHHHHHHHHHHHHHHH-HHHHhCCeeccccccceEEE
Confidence                 0011123689999999999999999 9999865    455888765

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.19  E-value=1.3e-10  Score=89.24  Aligned_cols=86  Identities=12%  Similarity=0.003  Sum_probs=71.6

Q ss_pred             HHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSAS   93 (138)
Q Consensus        15 ~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (138)
                      ...+.+|+.+|++++||||+++++.+..  +..++||||+. ++|.+++.....                          
T Consensus        45 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~--------------------------   96 (259)
T cd05037          45 SLAFFETASLMSQLSHKHLVKLYGVCVR--DENIMVEEYVKFGPLDVFLHREKN--------------------------   96 (259)
T ss_pred             HHHHHHHHHHHHcCCCcchhheeeEEec--CCcEEEEEcCCCCcHHHHHHhhcc--------------------------
Confidence            5777899999999999999999997764  56899999995 799999975321                          


Q ss_pred             CCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcceee
Q psy3822          94 RPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAFC  137 (138)
Q Consensus        94 ~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~~  137 (138)
                              .+++..+..++.||+.|| +|||+..    .+.|++|.+.
T Consensus        97 --------~~~~~~~~~~~~~i~~~l-~~LH~~~i~H~dlkp~Nill~  135 (259)
T cd05037          97 --------NVSLHWKLDVAKQLASAL-HYLEDKKLVHGNVCGKNILVA  135 (259)
T ss_pred             --------CCCHHHHHHHHHHHHHHH-HHHhhCCeecccCccceEEEe
Confidence                    477888999999999999 9999754    4558888764

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.19  E-value=1.2e-10  Score=94.95  Aligned_cols=87  Identities=14%  Similarity=0.145  Sum_probs=72.2

Q ss_pred             HHHHHHHHHHHHhhhC-CCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVY-RHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rL-rHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      ...+.+++|+.+|.++ +||||+++++.++ +.+.+|+||||+. ++|.+.+....                        
T Consensus        37 ~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~-~~~~~~lv~e~~~~g~L~~~~~~~~------------------------   91 (329)
T cd05588          37 EDIDWVQTEKHVFETASNHPFLVGLHSCFQ-TESRLFFVIEFVSGGDLMFHMQRQR------------------------   91 (329)
T ss_pred             hHHHHHHHHHHHHHhccCCCCCCceEEEEE-cCCEEEEEEeCCCCCCHHHHHHHcC------------------------
Confidence            4557789999999998 6999999999776 4679999999995 69988886432                        


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                 .+++.+++.++.||+.|| +|||+..    .+.|++|.+
T Consensus        92 -----------~l~~~~~~~~~~qi~~~l-~~lH~~~ivH~dlkp~Nili  129 (329)
T cd05588          92 -----------KLPEEHARFYSAEISLAL-NFLHERGIIYRDLKLDNVLL  129 (329)
T ss_pred             -----------CCCHHHHHHHHHHHHHHH-HHHHHCCeEecCCCHHHeEE
Confidence                       589999999999999999 9999864    345777654

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.19  E-value=1.4e-10  Score=90.37  Aligned_cols=85  Identities=13%  Similarity=0.067  Sum_probs=70.6

Q ss_pred             HHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          16 EILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASR   94 (138)
Q Consensus        16 e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (138)
                      +.+.+|+.+|.+++||||+++++.+. ..+.++++|||+. ++|.+++....                            
T Consensus        44 ~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~l~~~i~~~~----------------------------   94 (256)
T cd05113          44 DEFIEEAKVMMKLSHEKLVQLYGVCT-KQRPIYIVTEYMSNGCLLNYLREHG----------------------------   94 (256)
T ss_pred             HHHHHHHHHHhcCCCCCeeeEEEEEc-cCCCcEEEEEcCCCCcHHHHHHhcC----------------------------
Confidence            56789999999999999999999665 4668999999995 69999987432                            


Q ss_pred             CcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          95 PTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        95 ~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                            ..+++.++..++.||+.|| .|||+..    .+-|+++++
T Consensus        95 ------~~~~~~~~~~~~~~i~~~l-~~lH~~~i~H~dl~p~nili  133 (256)
T cd05113          95 ------KRFQPSQLLEMCKDVCEGM-AYLESKQFIHRDLAARNCLV  133 (256)
T ss_pred             ------CCCCHHHHHHHHHHHHHHH-HHHHhCCeeccccCcceEEE
Confidence                  1478899999999999999 9999764    345887765

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.19  E-value=1.6e-10  Score=89.84  Aligned_cols=89  Identities=13%  Similarity=0.054  Sum_probs=72.8

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeee-cCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEE-CPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee-~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      ...+.+++|+++|++++||||+++++.++. .+..++++|||+. ++|.+++....                        
T Consensus        48 ~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~------------------------  103 (284)
T cd05038          48 QHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHR------------------------  103 (284)
T ss_pred             HHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceEEEEecCCCCCHHHHHHhCc------------------------
Confidence            356788999999999999999999986654 2457999999995 69999997432                        


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                ..+++..+..++.||++|| +|||+..    .+.|++|++
T Consensus       104 ----------~~~~~~~~~~~~~~l~~aL-~~lH~~~i~H~dl~p~nil~  142 (284)
T cd05038         104 ----------DQINLKRLLLFSSQICKGM-DYLGSQRYIHRDLAARNILV  142 (284)
T ss_pred             ----------cccCHHHHHHHHHHHHHHH-HHHHhCCeecCCCCHHhEEE
Confidence                      1478889999999999999 9999865    345777765

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.18  E-value=1.8e-10  Score=89.13  Aligned_cols=90  Identities=17%  Similarity=0.091  Sum_probs=73.9

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ..+.+.+|+..|++++||||+++++.+.+..+.++++|||+. ++|.+++.....                         
T Consensus        42 ~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~-------------------------   96 (256)
T cd05082          42 TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR-------------------------   96 (256)
T ss_pred             hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECCCCCcHHHHHHhcCC-------------------------
Confidence            346789999999999999999999876555678999999996 699999875321                         


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcceee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAFC  137 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~~  137 (138)
                              ..+++..+..++.||+.|| +|||+..    .+-|++++++
T Consensus        97 --------~~~~~~~~~~~~~~i~~~l-~~lH~~~i~H~dlkp~nil~~  136 (256)
T cd05082          97 --------SVLGGDCLLKFSLDVCEAM-EYLEANNFVHRDLAARNVLVS  136 (256)
T ss_pred             --------CCCCHHHHHHHHHHHHHHH-HHHHhCCEeccccchheEEEc
Confidence                    1478889999999999999 9999865    3458888764

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.18  E-value=1.4e-10  Score=90.41  Aligned_cols=88  Identities=13%  Similarity=0.132  Sum_probs=69.7

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccccc-cHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYA-SLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~~-sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      ...+.+.+|+++|++++||||+++++.+++ .+.+++||||+.+ .|..++...                          
T Consensus        42 ~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~~~v~e~~~~~~l~~~~~~~--------------------------   94 (286)
T cd07847          42 VIKKIALREIRMLKQLKHPNLVNLIEVFRR-KRKLHLVFEYCDHTVLNELEKNP--------------------------   94 (286)
T ss_pred             cccHHHHHHHHHHHhCCCCCEeeeeeEEee-CCEEEEEEeccCccHHHHHHhCC--------------------------
Confidence            344667899999999999999999998875 6789999999975 454444321                          


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcceee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAFC  137 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~~  137 (138)
                               ..+++.+++.++.||++|| .|||+..    .+-|+++.++
T Consensus        95 ---------~~~~~~~~~~~~~ql~~~l-~~LH~~~i~H~dl~p~nil~~  134 (286)
T cd07847          95 ---------RGVPEHLIKKIIWQTLQAV-NFCHKHNCIHRDVKPENILIT  134 (286)
T ss_pred             ---------CCCCHHHHHHHHHHHHHHH-HHHHHCCceecCCChhhEEEc
Confidence                     1588999999999999999 9999854    4457777653

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.18  E-value=9.3e-11  Score=92.87  Aligned_cols=94  Identities=13%  Similarity=0.142  Sum_probs=74.8

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeec-CCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEEC-PDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~-~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      ...+.+.+|+.+|.+++||||+++++.+.+. .+.+++||||+.++|.+++......                       
T Consensus        44 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~-----------------------  100 (316)
T cd07842          44 GISQSACREIALLRELKHENVVSLVEVFLEHADKSVYLLFDYAEHDLWQIIKFHRQA-----------------------  100 (316)
T ss_pred             CccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEEEEeCCCcCHHHHHHhhccC-----------------------
Confidence            3456778999999999999999999987753 1689999999998998888754321                       


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcceee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAFC  137 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~~  137 (138)
                             ....+++.+++.++.||+.|| .|||+..    .+-|++|.+.
T Consensus       101 -------~~~~~~~~~~~~i~~qi~~~l-~~lH~~~i~h~dlkp~Nil~~  142 (316)
T cd07842         101 -------KRVSIPPSMVKSLLWQILNGV-HYLHSNWVLHRDLKPANILVM  142 (316)
T ss_pred             -------CCcCcCHHHHHHHHHHHHHHH-HHHHhCCEeeCCCCHHHEEEc
Confidence                   112689999999999999999 9999765    3347777653

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.18  E-value=1.5e-10  Score=91.87  Aligned_cols=87  Identities=14%  Similarity=0.067  Sum_probs=70.6

Q ss_pred             HHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSAS   93 (138)
Q Consensus        15 ~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (138)
                      ...+.+|+.+|++|+||||+++++.++ +++.+++||||+. ++|.+.+.....                          
T Consensus        44 ~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~--------------------------   96 (285)
T cd05605          44 EAMALNEKQILEKVNSRFVVSLAYAYE-TKDALCLVLTLMNGGDLKFHIYNMGN--------------------------   96 (285)
T ss_pred             HHHHHHHHHHHHhcCCCCEeeeeeeec-CCCeEEEEEeccCCCcHHHHHHhcCc--------------------------
Confidence            345678999999999999999999776 4678999999995 699988864321                          


Q ss_pred             CCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          94 RPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        94 ~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                             ..+++.+++.++.||++|| +|||+..    .+.|+++.+
T Consensus        97 -------~~~~~~~~~~~~~qi~~~l-~~lH~~~ivH~dlkp~Nil~  135 (285)
T cd05605          97 -------PGFDEERAVFYAAEITCGL-EDLHRERIVYRDLKPENILL  135 (285)
T ss_pred             -------CCCCHHHHHHHHHHHHHHH-HHHHHCCcEecCCCHHHEEE
Confidence                   1588999999999999999 9999864    334777665

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.18  E-value=4.5e-11  Score=97.07  Aligned_cols=89  Identities=15%  Similarity=0.198  Sum_probs=71.8

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeee---cCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEE---CPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPA   88 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee---~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (138)
                      ....+.+.+|+.+|++|+||||+++++.++.   ....+++||||+.++|.+.+....                      
T Consensus        45 ~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~----------------------  102 (334)
T cd07855          45 PTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVYVVMDLMESDLHHIIHSDQ----------------------  102 (334)
T ss_pred             ccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEEEEEehhhhhHHHHhccCC----------------------
Confidence            3455777889999999999999999987653   234799999999888888875321                      


Q ss_pred             CCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          89 NQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        89 ~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                   .+++.+++.++.||++|| .|||+..    .+-|++|++
T Consensus       103 -------------~~~~~~~~~i~~qi~~aL-~~LH~~~ivH~dlkp~Nil~  140 (334)
T cd07855         103 -------------PLTEEHIRYFLYQLLRGL-KYIHSANVIHRDLKPSNLLV  140 (334)
T ss_pred             -------------CCCHHHHHHHHHHHHHHH-HHHHHCCeecCCCCHHHEEE
Confidence                         488999999999999999 9999865    334777765

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.18  E-value=1.8e-10  Score=88.67  Aligned_cols=89  Identities=17%  Similarity=0.098  Sum_probs=72.0

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      ...+.+.+|+..|++++||||+++++.+++ ++.+++||||+. ++|.+.+.....                        
T Consensus        41 ~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~lv~e~~~~~~l~~~~~~~~~------------------------   95 (256)
T cd08218          41 KEREESRKEVAVLSNMKHPNIVQYQESFEE-NGNLYIVMDYCEGGDLYKKINAQRG------------------------   95 (256)
T ss_pred             HHHHHHHHHHHHHHhCCCCCeeeeEeeecC-CCeEEEEEecCCCCcHHHHHHhccC------------------------
Confidence            344678999999999999999999997764 679999999995 699998874321                        


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                               ..+++.++..++.||++|| .|||+..    .+-|++|.+
T Consensus        96 ---------~~~~~~~~~~~~~~l~~~l-~~lh~~~i~h~~l~~~nil~  134 (256)
T cd08218          96 ---------VLFPEDQILDWFVQICLAL-KHVHDRKILHRDIKSQNIFL  134 (256)
T ss_pred             ---------CCCCHHHHHHHHHHHHHHH-HHHHhCCEecCCCCHHHEEE
Confidence                     2578889999999999999 9999754    334777665

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.18  E-value=1.6e-10  Score=90.48  Aligned_cols=92  Identities=11%  Similarity=0.027  Sum_probs=72.9

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      ....+.+.+|+..+.+|+||||+++++.+. +...+++||||+. ++|.+++.+....                      
T Consensus        36 ~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~----------------------   92 (268)
T cd05086          36 SKEQNEFLQQGDPYRILQHPNILQCLGQCV-EAIPYLLVFEYCELGDLKSYLSQEQWH----------------------   92 (268)
T ss_pred             hHHHHHHHHHHHHHhccCCcchhheEEEec-CCCccEEEEecCCCCcHHHHHHhhhcc----------------------
Confidence            344578899999999999999999999776 4678999999996 6999999753211                      


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                               ...+++..++.++.||++|| +|||+..    .+.|+++.+
T Consensus        93 ---------~~~~~~~~~~~~~~~i~~al-~~lH~~~i~H~dikp~nil~  132 (268)
T cd05086          93 ---------RRNSQLLLLQRMACEIAAGV-THMHKHNFLHSDLALRNCFL  132 (268)
T ss_pred             ---------cccccHHHHHHHHHHHHHHH-HHHHHCCeeccCCccceEEE
Confidence                     01467778899999999999 9999754    334777654

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.18  E-value=1.6e-10  Score=88.47  Aligned_cols=87  Identities=22%  Similarity=0.178  Sum_probs=72.5

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      ...+.+.+|+++|++++||||+++++.++ +.+.++++|||+. ++|.+++....                         
T Consensus        44 ~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~-------------------------   97 (258)
T cd06632          44 EAVKQLEQEIALLSKLQHPNIVQYLGTER-EEDNLYIFLELVPGGSLAKLLKKYG-------------------------   97 (258)
T ss_pred             HHHHHHHHHHHHHHhcCCCCchheeeeEe-cCCeEEEEEEecCCCcHHHHHHhcC-------------------------
Confidence            45678899999999999999999999765 4678999999995 69999987432                         


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                .+++.++..++.||++|| .|||+..    .+-|++|++
T Consensus        98 ----------~~~~~~~~~~~~~i~~~l-~~lH~~~i~H~dl~~~ni~~  135 (258)
T cd06632          98 ----------SFPEPVIRLYTRQILLGL-EYLHDRNTVHRDIKGANILV  135 (258)
T ss_pred             ----------CCCHHHHHHHHHHHHHHH-HHHHHCCcccCCCCHHHEEE
Confidence                      477889999999999999 9999765    344777765

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.18  E-value=2.5e-10  Score=89.87  Aligned_cols=100  Identities=16%  Similarity=0.102  Sum_probs=76.3

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      ....+.+++|+.+|++|+||||+++++.+.. .+.++++||++. ++|.++|........               ..   
T Consensus        60 ~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~---------------~~---  120 (296)
T cd05051          60 DNAREDFLKEVKILSRLSDPNIARLLGVCTV-DPPLCMIMEYMENGDLNQFLQKHVAETS---------------GL---  120 (296)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCEeEEEEEEec-CCCcEEEEecCCCCCHHHHHHhcccccc---------------cc---
Confidence            3456788999999999999999999997664 578999999995 699999975431100               00   


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcceee
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAFC  137 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~~  137 (138)
                            ......+++..+..++.||++|| .|||+..    .+.|+++++.
T Consensus       121 ------~~~~~~~~~~~~~~~~~~i~~al-~~LH~~~i~H~dlkp~Nili~  164 (296)
T cd05051         121 ------ACNSKSLSFSTLLYMATQIASGM-RYLESLNFVHRDLATRNCLVG  164 (296)
T ss_pred             ------cccCCCCCHHHHHHHHHHHHHHH-HHHHHcCccccccchhceeec
Confidence                  00112589999999999999999 9999765    4458888763

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.18  E-value=2.9e-10  Score=91.70  Aligned_cols=89  Identities=13%  Similarity=0.088  Sum_probs=74.3

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      +...+.+.+|++.|++++||||+++++.+++ .+..++||||+.++|.+++....                         
T Consensus        66 ~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~~~g~l~~~~~~~~-------------------------  119 (317)
T cd06635          66 NEKWQDIIKEVKFLQRIKHPNSIEYKGCYLR-EHTAWLVMEYCLGSASDLLEVHK-------------------------  119 (317)
T ss_pred             hHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-CCeEEEEEeCCCCCHHHHHHHhc-------------------------
Confidence            3455678899999999999999999997764 67899999999999988886432                         


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                               ..+++.++..++.||+.|| .|||+..    .+-|++|++
T Consensus       120 ---------~~l~~~~~~~i~~~i~~~l-~~lH~~~i~H~dL~p~Nil~  158 (317)
T cd06635         120 ---------KPLQEVEIAAITHGALQGL-AYLHSHNMIHRDIKAGNILL  158 (317)
T ss_pred             ---------CCCCHHHHHHHHHHHHHHH-HHHHHCCcccCCCCcccEEE
Confidence                     1588899999999999999 9999864    445888776

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.18  E-value=1.4e-10  Score=93.82  Aligned_cols=88  Identities=14%  Similarity=0.135  Sum_probs=72.8

Q ss_pred             hHHHHHHHHHHHHhhhCC-CCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYR-HPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPAN   89 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLr-HPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (138)
                      +...+.+++|+.+|.+++ ||||+++++.+++ .+.+++||||+. ++|.+.+....                       
T Consensus        45 ~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~-----------------------  100 (332)
T cd05614          45 AKTVEHTRTERNVLEHVRQSPFLVTLHYAFQT-EAKLHLILDYVSGGEMFTHLYQRD-----------------------  100 (332)
T ss_pred             hhHHHHHHHHHHHHHhccCCCCcccEEEEEec-CCEEEEEEeCCCCCcHHHHHHHcC-----------------------
Confidence            345577899999999995 9999999997764 678999999995 69999987432                       


Q ss_pred             CCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          90 QSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        90 ~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                  .+++.+++.++.||++|| +|||+..    .+.|++|.+
T Consensus       101 ------------~~~~~~~~~~~~qi~~~l-~~lH~~~ivHrDlkp~Nili  138 (332)
T cd05614         101 ------------NFSEDEVRFYSGEIILAL-EHLHKLGIVYRDIKLENILL  138 (332)
T ss_pred             ------------CCCHHHHHHHHHHHHHHH-HHHHHCCcEecCCCHHHeEE
Confidence                        588899999999999999 9999754    345777765

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.17  E-value=1.5e-10  Score=93.57  Aligned_cols=84  Identities=20%  Similarity=0.272  Sum_probs=66.1

Q ss_pred             HHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          16 EILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASR   94 (138)
Q Consensus        16 e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (138)
                      +.++.+..+++.++||||+++++.++ +.+.+|+||||+. ++|.+.+....                            
T Consensus        41 ~~~~e~~~~l~~~~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~----------------------------   91 (321)
T cd05603          41 HIMAERNVLLKNLKHPFLVGLHYSFQ-TAEKLYFVLDYVNGGELFFHLQRER----------------------------   91 (321)
T ss_pred             HHHHHHHHHHHhCCCCCccceeeEEE-cCCEEEEEEcCCCCCCHHHHHHHcC----------------------------
Confidence            34444445678899999999999776 4679999999995 69988886422                            


Q ss_pred             CcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          95 PTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        95 ~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                             .+++.+++.++.||++|| +|||+..    .+.|++|.+
T Consensus        92 -------~~~~~~~~~~~~qi~~~L-~~lH~~~ivH~Dlkp~NIll  129 (321)
T cd05603          92 -------CFLEPRARFYAAEVASAI-GYLHSLNIIYRDLKPENILL  129 (321)
T ss_pred             -------CCCHHHHHHHHHHHHHHH-HHHHHCCeEeccCCHHHeEE
Confidence                   578899999999999999 9999754    344777654

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.17  E-value=4.2e-10  Score=88.45  Aligned_cols=105  Identities=10%  Similarity=0.082  Sum_probs=75.0

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      ...+.+.+|+.+|++++||||+++++.+. +.+..|+||||+. ++|.+++.......   ..+          .+    
T Consensus        49 ~~~~~~~~E~~~l~~l~h~niv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~---~~~----------~~----  110 (283)
T cd05090          49 QQWGEFQQEASLMAELHHPNIVCLLGVVT-QEQPVCMLFEYLNQGDLHEFLIMRSPHS---DVG----------CS----  110 (283)
T ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEe-cCCceEEEEEcCCCCcHHHHHHhcCCCC---ccc----------cc----
Confidence            34567889999999999999999999765 4678999999995 69999996432110   000          00    


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcceee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAFC  137 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~~  137 (138)
                       ..........+++.++..++.||++|| +|||+..    .+.|++|.+.
T Consensus       111 -~~~~~~~~~~~~~~~~~~i~~~i~~al-~~lH~~~i~H~dlkp~nili~  158 (283)
T cd05090         111 -SDEDGTVKSSLDHGDFLHIAIQIAAGM-EYLSSHFFVHKDLAARNILIG  158 (283)
T ss_pred             -cccccccccccCHHHHHHHHHHHHHHH-HHHHhcCeehhccccceEEEc
Confidence             000011122588889999999999999 9999865    3448887653

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.17  E-value=8.9e-11  Score=92.19  Aligned_cols=91  Identities=14%  Similarity=0.054  Sum_probs=73.1

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      +...+.+.+|+..|.+++||||+++++.++. .+.+++||||+. ++|..++.....                       
T Consensus        40 ~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~~lv~e~~~~~~l~~~~~~~~~-----------------------   95 (286)
T cd06622          40 ESKFNQIIMELDILHKAVSPYIVDFYGAFFI-EGAVYMCMEYMDAGSLDKLYAGGVA-----------------------   95 (286)
T ss_pred             HHHHHHHHHHHHHHHhcCCCcHHhhhhheec-CCeEEEEEeecCCCCHHHHHHhccc-----------------------
Confidence            4445778899999999999999999997764 679999999996 599888864211                       


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCCC-----cccCccee
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPST-----YLPSSVAF  136 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a~-----~~~~~~~~  136 (138)
                               ...+++.+++.++.||++|| .|||+..+     +-|+++.+
T Consensus        96 ---------~~~~~~~~~~~~~~~i~~~l-~~LH~~~~i~H~dl~p~nil~  136 (286)
T cd06622          96 ---------TEGIPEDVLRRITYAVVKGL-KFLKEEHNIIHRDVKPTNVLV  136 (286)
T ss_pred             ---------cCCCCHHHHHHHHHHHHHHH-HHHHhcCCEeeCCCCHHHEEE
Confidence                     12589999999999999999 99996433     34777665

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.17  E-value=2.2e-10  Score=92.02  Aligned_cols=91  Identities=15%  Similarity=0.121  Sum_probs=73.8

Q ss_pred             chHHHHHHHHHHHHhhhC-CCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          11 KETVTEILRLGVKQLEVY-RHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPA   88 (138)
Q Consensus        11 ~e~~~e~lrrEi~~L~rL-rHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (138)
                      .....+.+++|+..|+++ +||||++++..+. ..+.++++|||+. ++|.+++.....                     
T Consensus        78 ~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~i~~~~~---------------------  135 (302)
T cd05055          78 HSSEREALMSELKIMSHLGNHENIVNLLGACT-IGGPILVITEYCCYGDLLNFLRRKRE---------------------  135 (302)
T ss_pred             ChHHHHHHHHHHHHHHhccCCCCcceEEEEEe-cCCceEEEEEcCCCCcHHHHHHhCCC---------------------
Confidence            345567889999999999 7999999999765 4678999999995 799999974321                     


Q ss_pred             CCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          89 NQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        89 ~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                  ..+++.++..++.||+.|| +|||+..    .+.|+++.+
T Consensus       136 ------------~~l~~~~~~~i~~~i~~~l-~~lH~~~ivH~dlkp~Nil~  174 (302)
T cd05055         136 ------------SFLTLEDLLSFSYQVAKGM-AFLASKNCIHRDLAARNVLL  174 (302)
T ss_pred             ------------CCCCHHHHHHHHHHHHHHH-HHHHHCCeehhhhccceEEE
Confidence                        1378899999999999999 9999764    344777765

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.17  E-value=1.6e-10  Score=96.56  Aligned_cols=85  Identities=9%  Similarity=0.062  Sum_probs=71.4

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ..+.+++|+.+|+.++||||+++++.++ +.+.+|+||||+. ++|.+++...                           
T Consensus        86 ~~~~~~~e~~i~~~~~hp~iv~~~~~~~-~~~~~~lv~Ey~~gg~L~~~l~~~---------------------------  137 (370)
T cd05621          86 DSAFFWEERDIMAFANSPWVVQLFCAFQ-DDKYLYMVMEYMPGGDLVNLMSNY---------------------------  137 (370)
T ss_pred             hHHHHHHHHHHHHhCCCCCEeeEEEEEE-cCCEEEEEEcCCCCCcHHHHHHhc---------------------------
Confidence            3456889999999999999999999776 4679999999995 7999998632                           


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                               .+++.+++.++.||+.|| +|||+..    .+.|++|.+
T Consensus       138 ---------~~~~~~~~~~~~qil~aL-~~LH~~~IvHrDLKp~NILl  175 (370)
T cd05621         138 ---------DVPEKWAKFYTAEVVLAL-DAIHSMGLIHRDVKPDNMLL  175 (370)
T ss_pred             ---------CCCHHHHHHHHHHHHHHH-HHHHHCCeEecCCCHHHEEE
Confidence                     478889999999999999 9999854    445777765

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.17  E-value=1.6e-10  Score=88.83  Aligned_cols=88  Identities=15%  Similarity=0.155  Sum_probs=73.2

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      +...+.+.+|+.+|++++||||+++++... +.+.+++|+||+. ++|.+++....                        
T Consensus        40 ~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~------------------------   94 (264)
T cd06626          40 PKTIKEIADEMKVLELLKHPNLVKYYGVEV-HREKVYIFMEYCSGGTLEELLEHGR------------------------   94 (264)
T ss_pred             hHHHHHHHHHHHHHHhCCCCChhheeeeEe-cCCEEEEEEecCCCCcHHHHHhhcC------------------------
Confidence            346788999999999999999999999654 5789999999995 79999987431                        


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                 .+++.+++.++.||+.|| +|||+..    .+-|++|.+
T Consensus        95 -----------~~~~~~~~~i~~~i~~~l-~~lh~~~i~H~dl~~~nil~  132 (264)
T cd06626          95 -----------ILDEHVIRVYTLQLLEGL-AYLHSHGIVHRDIKPANIFL  132 (264)
T ss_pred             -----------CCChHHHHHHHHHHHHHH-HHHHHCCcccCCCCHHHEEE
Confidence                       467889999999999999 9999855    344777665

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.17  E-value=1.6e-10  Score=93.66  Aligned_cols=84  Identities=19%  Similarity=0.255  Sum_probs=66.6

Q ss_pred             HHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          16 EILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASR   94 (138)
Q Consensus        16 e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (138)
                      +.++.+..++++++||||+++++.+++ ++.+++||||+. ++|.+.+....                            
T Consensus        41 ~~~~e~~~~~~~l~hp~iv~~~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~----------------------------   91 (323)
T cd05575          41 HIMAERNVLLKNVKHPFLVGLHYSFQT-ADKLYFVLDYVNGGELFFHLQRER----------------------------   91 (323)
T ss_pred             HHHHHHHHHHhhCCCCCCCCeeEEEEe-CCEEEEEEcCCCCCCHHHHHHhcC----------------------------
Confidence            344444456688999999999997764 779999999995 69999887432                            


Q ss_pred             CcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          95 PTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        95 ~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                             .+++.+++.++.||++|| +|||+..    .+.|++|.+
T Consensus        92 -------~~~~~~~~~~~~qi~~~l-~~lH~~givH~dikp~NIll  129 (323)
T cd05575          92 -------SFPEPRARFYAAEIASAL-GYLHSLNIIYRDLKPENILL  129 (323)
T ss_pred             -------CCCHHHHHHHHHHHHHHH-HHHHHCCeEeCCCCHHHeEE
Confidence                   578899999999999999 9999864    344777654

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.17  E-value=1.5e-10  Score=94.43  Aligned_cols=88  Identities=19%  Similarity=0.199  Sum_probs=72.5

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      ....+.+.+|+.+|.+++||||+++++.+.+..+.++++|||+.++|.+++...                          
T Consensus        50 ~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~--------------------------  103 (328)
T cd07856          50 PVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYFVTELLGTDLHRLLTSR--------------------------  103 (328)
T ss_pred             cchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEEEeehhccCHHHHHhcC--------------------------
Confidence            345577889999999999999999999887656689999999988998888621                          


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                .+++..++.++.||++|| .|||+..    .+.|+++.+
T Consensus       104 ----------~~~~~~~~~~~~ql~~aL-~~LH~~~iiH~dl~p~Nili  141 (328)
T cd07856         104 ----------PLEKQFIQYFLYQILRGL-KYVHSAGVVHRDLKPSNILI  141 (328)
T ss_pred             ----------CCCHHHHHHHHHHHHHHH-HHHHhCCcccCCCCHHHEeE
Confidence                      467788899999999999 9999865    344777655

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.17  E-value=2.5e-10  Score=89.09  Aligned_cols=89  Identities=9%  Similarity=-0.020  Sum_probs=69.8

Q ss_pred             HHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          16 EILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASR   94 (138)
Q Consensus        16 e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (138)
                      ..+.+|+..|++++||||++++..+.+ .+.+++||||+. ++|.+++.......                         
T Consensus        40 ~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~-------------------------   93 (269)
T cd05087          40 MKFLEEAQPYRSLQHSNLLQCLGQCTE-VTPYLLVMEFCPLGDLKGYLRSCRKAE-------------------------   93 (269)
T ss_pred             HHHHHHHHHHHhCCCCCEeeEEEEEcC-CCCcEEEEECCCCCcHHHHHHHhhhcc-------------------------
Confidence            467889999999999999999997764 567999999996 79999997542110                         


Q ss_pred             CcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          95 PTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        95 ~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                           ...+++..++.++.||++|| +|||+..    .+.|+++.+
T Consensus        94 -----~~~~~~~~~~~~~~qi~~al-~~lH~~~i~H~dlkp~nil~  133 (269)
T cd05087          94 -----LMTPDPTTLQRMACEIALGL-LHLHKNNFIHSDLALRNCLL  133 (269)
T ss_pred             -----cccccHHHHHHHHHHHHHHH-HHHHHCCEeccccCcceEEE
Confidence                 12456778888999999999 9999765    334777654

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.17  E-value=2.6e-10  Score=91.17  Aligned_cols=89  Identities=15%  Similarity=0.099  Sum_probs=73.5

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ...+.+.+|+..|.+++||||+++++.+.+ .+..++||||+.++|.+++....                          
T Consensus        57 ~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~-~~~~~lv~e~~~g~l~~~~~~~~--------------------------  109 (307)
T cd06607          57 EKWQDIIKEVRFLQQLRHPNTIEYKGCYLR-EHTAWLVMEYCLGSASDILEVHK--------------------------  109 (307)
T ss_pred             HHHHHHHHHHHHHHhCCCCCEEEEEEEEEe-CCeEEEEHHhhCCCHHHHHHHcc--------------------------
Confidence            445678899999999999999999997764 67899999999999988886432                          


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcceee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAFC  137 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~~  137 (138)
                              ..+++.++..++.||+.|| .|||+..    .+-|++|.++
T Consensus       110 --------~~l~~~~~~~~~~ql~~~L-~~LH~~~i~H~dl~p~nIl~~  149 (307)
T cd06607         110 --------KPLQEVEIAAICHGALQGL-AYLHSHERIHRDIKAGNILLT  149 (307)
T ss_pred             --------cCCCHHHHHHHHHHHHHHH-HHHHHCCceecCCCcccEEEC
Confidence                    1478899999999999999 9999754    3458887763

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.17  E-value=2.6e-10  Score=88.38  Aligned_cols=94  Identities=13%  Similarity=0.016  Sum_probs=73.5

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ....+.+|+++|++++||||+++++.++ ..+..+++|||+. ++|.+++.......                       
T Consensus        42 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~~v~e~~~~~~L~~~l~~~~~~~-----------------------   97 (269)
T cd05044          42 EKKEFLKEAHLMSNFNHPNIVKLLGVCL-LNEPQYIIMELMEGGDLLSYLRDARVER-----------------------   97 (269)
T ss_pred             hHHHHHHHHHHHHhcCCCCeeeEeeeec-CCCCeEEEEeccCCCcHHHHHHHhhhcc-----------------------
Confidence            4566788999999999999999999665 4678999999995 79999997532110                       


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcceee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAFC  137 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~~  137 (138)
                           .....+++.++..++.||+.|| .|||+..    .+-|++|++.
T Consensus        98 -----~~~~~~~~~~~~~~~~~l~~~l-~~lH~~~i~H~dl~p~nil~~  140 (269)
T cd05044          98 -----FGPPLLTLKELLDICLDVAKGC-VYLEQMHFIHRDLAARNCLVS  140 (269)
T ss_pred             -----cCCccccHHHHHHHHHHHHHHH-HHHHhCCcccCCCChheEEEe
Confidence                 0122578889999999999999 9999754    4458887753

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.17  E-value=1.8e-10  Score=89.23  Aligned_cols=86  Identities=12%  Similarity=0.027  Sum_probs=71.0

Q ss_pred             HHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          16 EILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASR   94 (138)
Q Consensus        16 e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (138)
                      +.+.+|+.+|++++||||+++++.++ ..+.+++||||+. ++|.+++....                            
T Consensus        44 ~~~~~e~~~l~~l~~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~----------------------------   94 (256)
T cd05059          44 DDFIEEAKVMMKLSHPNLVQLYGVCT-KQRPIFIVTEYMANGCLLNYLRERK----------------------------   94 (256)
T ss_pred             HHHHHHHHHHHhCCCCCEEEEEEEEc-CCCceEEEEecCCCCCHHHHHHhcc----------------------------
Confidence            45678999999999999999999665 4678999999995 69999987432                            


Q ss_pred             CcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcceee
Q psy3822          95 PTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAFC  137 (138)
Q Consensus        95 ~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~~  137 (138)
                            ..+++..+..++.||++|| .|||+..    .+-|++|+++
T Consensus        95 ------~~~~~~~~~~i~~qi~~~l-~~lH~~~i~H~dl~p~ni~i~  134 (256)
T cd05059          95 ------GKLGTEWLLDMCSDVCEAM-EYLESNGFIHRDLAARNCLVG  134 (256)
T ss_pred             ------cCCCHHHHHHHHHHHHHHH-HHHHHCCcccccccHhhEEEC
Confidence                  1578889999999999999 9999865    3458887764

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.17  E-value=2.2e-10  Score=87.98  Aligned_cols=91  Identities=14%  Similarity=0.067  Sum_probs=73.3

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      +...+.+++|+..+++++||||+.+++.+.+....++++|||+. ++|.+.+....                        
T Consensus        40 ~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~------------------------   95 (257)
T cd08223          40 RRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMGFCEGGDLYHKLKEQK------------------------   95 (257)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEecccCCCcHHHHHHHhc------------------------
Confidence            34567789999999999999999999977654557999999995 69999887421                        


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                               ...+++.+++.++.||+.|| .|||+..    .+-|+++.+
T Consensus        96 ---------~~~l~~~~~~~~~~~l~~~l-~~lH~~~i~H~di~p~nil~  135 (257)
T cd08223          96 ---------GKLLPENQVVEWFVQIAMAL-QYLHEKHILHRDLKTQNVFL  135 (257)
T ss_pred             ---------CCCCCHHHHHHHHHHHHHHH-HHHHhCCeeccCCCchhEEE
Confidence                     11578899999999999999 9999764    334777764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.17  E-value=3.6e-10  Score=88.45  Aligned_cols=105  Identities=16%  Similarity=0.120  Sum_probs=75.9

Q ss_pred             hHHHHHHHHHHHHhhhC-CCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVY-RHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPAN   89 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rL-rHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (138)
                      ....+.+++|+..|.+| +||||+++++.+++ .+.+++||||+. ++|.+++.......             ..+....
T Consensus        36 ~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~-~~~~~lv~e~~~~~~L~~~i~~~~~~~-------------~~~~~~~  101 (270)
T cd05047          36 KDDHRDFAGELEVLCKLGHHPNIINLLGACEH-RGYLYLAIEYAPHGNLLDFLRKSRVLE-------------TDPAFAI  101 (270)
T ss_pred             HHHHHHHHHHHHHHHhhccCCCeeeEEEEEec-CCCceEEEEeCCCCcHHHHHHhccccc-------------ccccccc
Confidence            34556789999999999 79999999997764 668999999995 79999997543210             0000000


Q ss_pred             CCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcceee
Q psy3822          90 QSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAFC  137 (138)
Q Consensus        90 ~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~~  137 (138)
                            .......+++..+..++.||+.|| +|||+..    .+.|++|.+.
T Consensus       102 ------~~~~~~~l~~~~~~~~~~~i~~al-~~lH~~~i~H~dikp~nili~  146 (270)
T cd05047         102 ------ANSTASTLSSQQLLHFAADVARGM-DYLSQKQFIHRDLAARNILVG  146 (270)
T ss_pred             ------ccCCcCCCCHHHHHHHHHHHHHHH-HHHHHCCEeecccccceEEEc
Confidence                  001112588899999999999999 9999853    3458887763

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.17  E-value=2.9e-10  Score=89.15  Aligned_cols=87  Identities=10%  Similarity=0.065  Sum_probs=71.7

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      ...+.+.+|+..|++++||||+++++.+..  ..+++||||+. ++|.+.+....                         
T Consensus        51 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~v~e~~~~g~L~~~l~~~~-------------------------  103 (279)
T cd05057          51 KANKEILDEAYVMASVDHPHVVRLLGICLS--SQVQLITQLMPLGCLLDYVRNHK-------------------------  103 (279)
T ss_pred             HHHHHHHHHHHHHHhCCCCCcceEEEEEec--CceEEEEecCCCCcHHHHHHhcc-------------------------
Confidence            455678899999999999999999996654  68999999995 79999987432                         


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                               ..+++..+..++.||+.|| +|||+..    .+-|+++.+
T Consensus       104 ---------~~~~~~~~~~~~~qi~~~l-~~LH~~~i~H~di~p~nil~  142 (279)
T cd05057         104 ---------DNIGSQYLLNWCVQIAKGM-SYLEEKRLVHRDLAARNVLV  142 (279)
T ss_pred             ---------CCCCHHHHHHHHHHHHHHH-HHHHhCCEEecccCcceEEE
Confidence                     1478899999999999999 9999854    334777665

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.17  E-value=2.7e-10  Score=86.05  Aligned_cols=88  Identities=19%  Similarity=0.169  Sum_probs=72.8

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecC-CeEEEEeccc-cccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECP-DALAFATEPV-YASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~-~~L~fVtE~V-~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      ...+.+++|+..+++|.||||+++++..++.. +.++++||++ .++|.+++.+..                        
T Consensus        41 ~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~------------------------   96 (260)
T cd06606          41 EELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLEYVSGGSLSSLLKKFG------------------------   96 (260)
T ss_pred             HHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEEecCCCcHHHHHHHcC------------------------
Confidence            45688999999999999999999999776531 7899999999 579999987432                        


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                 .+++.++..++.|+++|| .|||+..    .+-|++|++
T Consensus        97 -----------~~~~~~~~~~~~~l~~~l-~~lh~~~~~h~dl~p~ni~i  134 (260)
T cd06606          97 -----------KLPEPVIRKYTRQILEGL-AYLHSNGIVHRDIKGANILV  134 (260)
T ss_pred             -----------CCCHHHHHHHHHHHHHHH-HHHHHCCccccCCCHHHEEE
Confidence                       578899999999999999 9999844    223777665

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.17  E-value=2.3e-10  Score=90.54  Aligned_cols=90  Identities=14%  Similarity=0.038  Sum_probs=72.1

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ..+.+.+|+.+|++|+||||+++.+.++ +++.+++||||+. ++|.+.+......                        
T Consensus        36 ~~~~~~~E~~il~~l~~~~i~~~~~~~~-~~~~~~lv~e~~~~g~L~~~~~~~~~~------------------------   90 (280)
T cd05608          36 GYEGAMVEKRILAKVHSRFIVSLAYAFQ-TKTDLCLVMTIMNGGDLRYHIYNVDEE------------------------   90 (280)
T ss_pred             HHHHHHHHHHHHHhCCCCcEeeeeEEEc-CCCeEEEEEeCCCCCCHHHHHHhcccc------------------------
Confidence            3466788999999999999999999776 4678999999995 7999888643211                        


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                             ...+++.++..++.||++|| +|||+..    .+.|++|.+
T Consensus        91 -------~~~l~~~~~~~~~~qi~~~l-~~lH~~~i~H~dlkp~Nili  130 (280)
T cd05608          91 -------NPGFPEPRACFYTAQIISGL-EHLHQRRIIYRDLKPENVLL  130 (280)
T ss_pred             -------CCCCCHHHHHHHHHHHHHHH-HHHHHCCcccCCCCHHHEEE
Confidence                   12689999999999999999 9999864    344777665

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.17  E-value=3.1e-10  Score=94.83  Aligned_cols=124  Identities=15%  Similarity=0.119  Sum_probs=78.2

Q ss_pred             hHHHHHHHHHHHHhhhC-CCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCC-CC-----------------
Q psy3822          12 ETVTEILRLGVKQLEVY-RHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPA-PN-----------------   71 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rL-rHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~-~~-----------------   71 (138)
                      ....+.+.+|+.+|++| +||||+++++.+.+ .+.+++||||+. ++|.+++....... ..                 
T Consensus        82 ~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~-~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (374)
T cd05106          82 TDEREALMSELKILSHLGQHKNIVNLLGACTH-GGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNI  160 (374)
T ss_pred             HHHHHHHHHHHHHHHhhccCCceeeEeeEecC-CCCeEEeHhhccCCcHHHHHHhhhhhhcccccccccccccccccccc
Confidence            34467789999999999 89999999997764 568999999995 79999997542110 00                 


Q ss_pred             --------CCCCCCCCCCCCCCC--CCCCC-------CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----Ccc
Q psy3822          72 --------HSTNPVTGGSGSSPP--PANQS-------ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYL  130 (138)
Q Consensus        72 --------~~~~~~~~~~~~~~~--~~~~~-------~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~  130 (138)
                              +.+|.++.....+..  +....       ...........+++.++..++.||++|| +|||+..    .+.
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL-~yLH~~giiHrDLk  239 (374)
T cd05106         161 TLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGM-DFLASKNCIHRDVA  239 (374)
T ss_pred             chhcccccccccccccccccccccCCccccccccccccchhccCCCCCcCHHHHHHHHHHHHHHH-HHHHHCCEEeccCc
Confidence                    000000000000000  00000       0000111223689999999999999999 9999754    445


Q ss_pred             cCcceee
Q psy3822         131 PSSVAFC  137 (138)
Q Consensus       131 ~~~~~~~  137 (138)
                      |++|.+.
T Consensus       240 p~Nil~~  246 (374)
T cd05106         240 ARNVLLT  246 (374)
T ss_pred             hheEEEe
Confidence            8887763

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.17  E-value=2.8e-10  Score=87.29  Aligned_cols=87  Identities=17%  Similarity=0.186  Sum_probs=73.2

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      ...+.+.+|+..+.+++||||+++++.+.+ .+.+++||||+. ++|.+++....                         
T Consensus        41 ~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~-------------------------   94 (264)
T cd06623          41 EFRKQLLRELKTLRSCESPYVVKCYGAFYK-EGEISIVLEYMDGGSLADLLKKVG-------------------------   94 (264)
T ss_pred             HHHHHHHHHHHHHHhcCCCCeeeEEEEEcc-CCeEEEEEEecCCCcHHHHHHHcC-------------------------
Confidence            456788999999999999999999997764 578999999996 79999997431                         


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCCC-----cccCccee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPST-----YLPSSVAF  136 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a~-----~~~~~~~~  136 (138)
                                .+++..+..++.||++|| +|||+..+     +-|+++++
T Consensus        95 ----------~l~~~~~~~~~~~l~~~l-~~lh~~~~~~H~~l~~~ni~~  133 (264)
T cd06623          95 ----------KIPEPVLAYIARQILKGL-DYLHTKRHIIHRDIKPSNLLI  133 (264)
T ss_pred             ----------CCCHHHHHHHHHHHHHHH-HHHhccCCCccCCCCHHHEEE
Confidence                      588899999999999999 99998333     34777655

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.17  E-value=2.8e-10  Score=88.34  Aligned_cols=89  Identities=11%  Similarity=0.076  Sum_probs=72.2

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      +...+.+.+|+..|.+++||||+++++.+. ..+.+++||||+. ++|.+++....                        
T Consensus        47 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~------------------------  101 (268)
T cd05063          47 EKQRQDFLSEASIMGQFSHHNIIRLEGVVT-KFKPAMIITEYMENGALDKYLRDHD------------------------  101 (268)
T ss_pred             HHHHHHHHHHHHHHhcCCCCCeeEEEEEEc-cCCCcEEEEEcCCCCCHHHHHHhcC------------------------
Confidence            344567889999999999999999999776 4678999999996 69999987432                        


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                ..+++.++..++.|++.|| +|||+..    .+.|+++..
T Consensus       102 ----------~~~~~~~~~~~~~~l~~al-~~lH~~~i~H~dlkp~Nili  140 (268)
T cd05063         102 ----------GEFSSYQLVGMLRGIAAGM-KYLSDMNYVHRDLAARNILV  140 (268)
T ss_pred             ----------CCCCHHHHHHHHHHHHHHH-HHHHHCCeeccccchhhEEE
Confidence                      1578889999999999999 9999765    334777653

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>KOG0197|consensus

Probab=99.17  E-value=1.1e-10  Score=103.10  Aligned_cols=77  Identities=18%  Similarity=0.144  Sum_probs=64.2

Q ss_pred             HHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          16 EILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASR   94 (138)
Q Consensus        16 e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (138)
                      +.+.+||++|++|+|||||+++....+ .+.+||||||+. |||-++|+..+.                           
T Consensus       246 ~~f~~Ea~iMk~L~H~~lV~l~gV~~~-~~piyIVtE~m~~GsLl~yLr~~~~---------------------------  297 (468)
T KOG0197|consen  246 EAFLREAQIMKKLRHEKLVKLYGVCTK-QEPIYIVTEYMPKGSLLDYLRTREG---------------------------  297 (468)
T ss_pred             hHHHHHHHHHHhCcccCeEEEEEEEec-CCceEEEEEecccCcHHHHhhhcCC---------------------------
Confidence            556699999999999999999997764 447999999995 899999986321                           


Q ss_pred             CcccccCCccHHHHHHHHHHHHHHHHhhhcCCC
Q psy3822          95 PTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS  127 (138)
Q Consensus        95 ~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a  127 (138)
                            ..+.-.+...+..||++|+ +||.+..
T Consensus       298 ------~~l~~~~Ll~~a~qIaeGM-~YLes~~  323 (468)
T KOG0197|consen  298 ------GLLNLPQLLDFAAQIAEGM-AYLESKN  323 (468)
T ss_pred             ------CccchHHHHHHHHHHHHHH-HHHHhCC
Confidence                  1466678889999999999 9998753

>KOG0598|consensus

Probab=99.16  E-value=9.2e-11  Score=100.49  Aligned_cols=84  Identities=14%  Similarity=0.199  Sum_probs=73.9

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      .++.++.|..+|.+++||.||.+...|+ |.+.||||+||+. |+|+-.|.+.+                          
T Consensus        68 e~~~~~~Er~IL~~v~hPFiv~l~ysFQ-t~~kLylVld~~~GGeLf~hL~~eg--------------------------  120 (357)
T KOG0598|consen   68 EVRHTKAERNILSKIKHPFIVKLIYSFQ-TEEKLYLVLDYLNGGELFYHLQREG--------------------------  120 (357)
T ss_pred             hHHHHHHHHHHHHhCCCCcEeeeEEecc-cCCeEEEEEeccCCccHHHHHHhcC--------------------------
Confidence            4678899999999999999999999997 6889999999995 69999998543                          


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcc
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSV  134 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~  134 (138)
                               .|+|..++.++..|+.|| .|||+..    .+.|+++
T Consensus       121 ---------~F~E~~arfYlaEi~lAL-~~LH~~gIiyRDlKPENI  156 (357)
T KOG0598|consen  121 ---------RFSEDRARFYLAEIVLAL-GYLHSKGIIYRDLKPENI  156 (357)
T ss_pred             ---------CcchhHHHHHHHHHHHHH-HHHHhCCeeeccCCHHHe
Confidence                     799999999999999999 9999865    4557665

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.16  E-value=1.2e-10  Score=88.89  Aligned_cols=87  Identities=17%  Similarity=0.149  Sum_probs=73.4

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccc-cccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPV-YASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V-~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ..+.+++|+.+|++++||||+++++.++ +++.++++|||+ .++|.+++....                          
T Consensus        36 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~~v~e~~~~~~L~~~l~~~~--------------------------   88 (250)
T cd05123          36 EVEHTLTERNILSRINHPFIVKLHYAFQ-TEEKLYLVLEYAPGGELFSHLSKEG--------------------------   88 (250)
T ss_pred             HHHHHHHHHHHHHHcCCCcHHHHHHHee-cCCeeEEEEecCCCCcHHHHHHhcC--------------------------
Confidence            4567899999999999999999999776 577999999999 689999997432                          


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcceee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAFC  137 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~~  137 (138)
                               .+++.++..++.||++|| .|||+..    .+-|++|+++
T Consensus        89 ---------~l~~~~~~~~~~qi~~~l-~~lh~~~~~H~~l~p~ni~~~  127 (250)
T cd05123          89 ---------RFSEERARFYAAEIVLAL-EYLHSLGIIYRDLKPENILLD  127 (250)
T ss_pred             ---------CCCHHHHHHHHHHHHHHH-HHHHHCCceecCCCcceEEEc
Confidence                     478899999999999999 9999843    3348887764

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.16  E-value=1.5e-10  Score=89.84  Aligned_cols=91  Identities=20%  Similarity=0.199  Sum_probs=73.6

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeec-CCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEEC-PDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~-~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      +...+.+.+|+.+|++++||||+++++.+.+. ++.+++||||+.++|.+++....                        
T Consensus        39 ~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~------------------------   94 (287)
T cd07840          39 EGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFEYMDHDLTGLLDSPE------------------------   94 (287)
T ss_pred             ccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEeccccccHHHHHhccC------------------------
Confidence            44456678999999999999999999977653 27899999999889988886431                        


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcceee
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAFC  137 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~~  137 (138)
                                ..+++.++..++.||++|| .|||+..    .+-|++|+++
T Consensus        95 ----------~~~~~~~~~~i~~~i~~al-~~LH~~~~~h~dl~p~nil~~  134 (287)
T cd07840          95 ----------VKFTESQIKCYMKQLLEGL-QYLHSNGILHRDIKGSNILIN  134 (287)
T ss_pred             ----------CCCCHHHHHHHHHHHHHHH-HHHHHCCceeccCcHHHeEEc
Confidence                      1588999999999999999 9999764    3347776653

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.16  E-value=1.7e-10  Score=96.16  Aligned_cols=85  Identities=8%  Similarity=0.008  Sum_probs=71.1

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ..+.+.+|+.+|++++||||+++++.++ +.+.+++||||+. ++|.+++...                           
T Consensus        86 ~~~~~~~e~~il~~~~h~~iv~~~~~~~-~~~~~~lv~Ey~~gg~L~~~l~~~---------------------------  137 (370)
T cd05596          86 DSAFFWEERDIMAHANSEWIVQLHYAFQ-DDKYLYMVMEYMPGGDLVNLMSNY---------------------------  137 (370)
T ss_pred             hHHHHHHHHHHHHhCCCCCcceEEEEEe-cCCEEEEEEcCCCCCcHHHHHHhc---------------------------
Confidence            3456789999999999999999999776 4778999999995 7999998632                           


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                               .+++..++.++.||+.|| +|||+..    .+.|++|.+
T Consensus       138 ---------~l~~~~~~~~~~qi~~aL-~~LH~~~ivHrDLkp~NILl  175 (370)
T cd05596         138 ---------DIPEKWARFYTAEVVLAL-DAIHSMGFIHRDVKPDNMLL  175 (370)
T ss_pred             ---------CCCHHHHHHHHHHHHHHH-HHHHHCCeeccCCCHHHEEE
Confidence                     477889999999999999 9999864    445777765

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.16  E-value=2e-10  Score=93.12  Aligned_cols=83  Identities=17%  Similarity=0.223  Sum_probs=65.7

Q ss_pred             HHHHHH-HHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          17 ILRLGV-KQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASR   94 (138)
Q Consensus        17 ~lrrEi-~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (138)
                      .+.+|. .+|+.++||||+++++.+++ .+.+|+||||+. ++|...+....                            
T Consensus        41 ~~~~e~~~~l~~~~hp~iv~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~----------------------------   91 (325)
T cd05604          41 HIMAERNVLLKNVKHPFLVGLHYSFQT-TEKLYFVLDFVNGGELFFHLQRER----------------------------   91 (325)
T ss_pred             HHHHHHHHHHHhCCCCCCccEEEEEec-CCEEEEEEcCCCCCCHHHHHHHcC----------------------------
Confidence            334444 45778999999999997764 679999999995 69988886322                            


Q ss_pred             CcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          95 PTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        95 ~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                             .+++.+++.++.||+.|| +|||+..    .+.|++|.+
T Consensus        92 -------~~~~~~~~~~~~qi~~al-~~lH~~givH~Dlkp~NIll  129 (325)
T cd05604          92 -------SFPEPRARFYAAEIASAL-GYLHSINIVYRDLKPENILL  129 (325)
T ss_pred             -------CCCHHHHHHHHHHHHHHH-HHHHHCCeeecCCCHHHeEE
Confidence                   588999999999999999 9999854    344777665

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.16  E-value=1.7e-10  Score=90.99  Aligned_cols=89  Identities=19%  Similarity=0.164  Sum_probs=73.2

Q ss_pred             chHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          11 KETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPAN   89 (138)
Q Consensus        11 ~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (138)
                      .+...+.+.+|+++|++++||||+++++.+.+ .+.+++||||+. ++|.+++.+..                       
T Consensus        43 ~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~-----------------------   98 (284)
T cd06620          43 KSSVRKQILRELQIMHECRSPYIVSFYGAFLN-ENNICMCMEFMDCGSLDRIYKKGG-----------------------   98 (284)
T ss_pred             cchHHHHHHHHHHHHHHcCCCCcceEeeeEec-CCEEEEEEecCCCCCHHHHHHhcc-----------------------
Confidence            35566788999999999999999999997764 679999999995 69998886432                       


Q ss_pred             CCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC-----CcccCccee
Q psy3822          90 QSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS-----TYLPSSVAF  136 (138)
Q Consensus        90 ~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a-----~~~~~~~~~  136 (138)
                                  .+++..++.++.|++.|| .|||+..     .+-|+++++
T Consensus        99 ------------~~~~~~~~~~~~~i~~~l-~~LH~~~~i~H~dl~p~nil~  137 (284)
T cd06620          99 ------------PIPVEILGKIAVAVVEGL-TYLYNVHRIMHRDIKPSNILV  137 (284)
T ss_pred             ------------CCCHHHHHHHHHHHHHHH-HHHHHhcCeeccCCCHHHEEE
Confidence                        478889999999999999 9999743     334777654

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.16  E-value=2.8e-10  Score=89.24  Aligned_cols=90  Identities=12%  Similarity=0.050  Sum_probs=71.7

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeee-cCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEE-CPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPAN   89 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee-~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (138)
                      +...+.+++|+++|++++||||+++++.+.. +...+++||||+. ++|.+++....                       
T Consensus        46 ~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-----------------------  102 (284)
T cd05081          46 AEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRLVMEYLPYGSLRDYLQKHR-----------------------  102 (284)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceEEEEEecCCCCHHHHHHhcC-----------------------
Confidence            3445778999999999999999999886532 3457999999995 79999997432                       


Q ss_pred             CCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          90 QSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        90 ~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                 ..+++..+..++.||++|| .|||+..    .+.|++|..
T Consensus       103 -----------~~l~~~~~~~~~~~l~~aL-~~LH~~~i~H~dlkp~nili  141 (284)
T cd05081         103 -----------ERLDHRKLLLYASQICKGM-EYLGSKRYVHRDLATRNILV  141 (284)
T ss_pred             -----------cCCCHHHHHHHHHHHHHHH-HHHHHCCceeccCCHhhEEE
Confidence                       1478889999999999999 9999865    345777754

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.16  E-value=3.1e-10  Score=89.38  Aligned_cols=104  Identities=15%  Similarity=0.168  Sum_probs=75.2

Q ss_pred             hHHHHHHHHHHHHhhhC-CCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVY-RHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPAN   89 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rL-rHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (138)
                      +.....+.+|+..|+++ +||||+++++.+++ .+.++++|||+. ++|.+++.........            .+.   
T Consensus        56 ~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~-~~~~~li~e~~~~~~L~~~l~~~~~~~~~------------~~~---  119 (293)
T cd05053          56 EKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQ-EGPLYVVVEYAAHGNLRDFLRARRPPGEY------------ASP---  119 (293)
T ss_pred             HHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcC-CCCeEEEEEeCCCCcHHHHHHhcCCCccc------------ccc---
Confidence            34456789999999999 89999999997764 668999999985 7999999754311000            000   


Q ss_pred             CCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          90 QSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        90 ~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                          .........+++.++..++.||+.|| .|||+..    .+.|+++++
T Consensus       120 ----~~~~~~~~~l~~~~~~~i~~qi~~al-~~LH~~~ivH~dlkp~Nil~  165 (293)
T cd05053         120 ----DDPRPPEETLTQKDLVSFAYQVARGM-EFLASKKCIHRDLAARNVLV  165 (293)
T ss_pred             ----ccccccccccCHHHHHHHHHHHHHHH-HHHHHCCccccccceeeEEE
Confidence                00001123689999999999999999 9999754    445887765

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.16  E-value=2.7e-10  Score=89.24  Aligned_cols=99  Identities=14%  Similarity=0.034  Sum_probs=76.8

Q ss_pred             chHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          11 KETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPAN   89 (138)
Q Consensus        11 ~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (138)
                      .....+.+.+|+.+|++|+||||+++++...+.....++++|++. ++|.+++.......                    
T Consensus        48 ~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~~--------------------  107 (280)
T cd05043          48 SEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGE--------------------  107 (280)
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCCEEEEEcCCCCcHHHHHHhccccc--------------------
Confidence            445568889999999999999999999976655678999999985 79999997543210                    


Q ss_pred             CCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcceee
Q psy3822          90 QSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAFC  137 (138)
Q Consensus        90 ~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~~  137 (138)
                             ......+++.++..++.||+.|| +|||+..    .+-|++|+++
T Consensus       108 -------~~~~~~l~~~~~~~i~~~i~~~l-~~LH~~~i~H~di~p~nil~~  151 (280)
T cd05043         108 -------ANNPQALSTQQLVHMAIQIACGM-SYLHKRGVIHKDIAARNCVID  151 (280)
T ss_pred             -------cccccCCCHHHHHHHHHHHHHHH-HHHHHCCEeecccCHhhEEEc
Confidence                   00112688999999999999999 9999765    2348887763

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.16  E-value=2e-10  Score=94.26  Aligned_cols=87  Identities=16%  Similarity=0.172  Sum_probs=70.1

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeecC-----CeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEECP-----DALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPP   86 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~-----~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~   86 (138)
                      ....+.+.+|+.+|++++||||+++++.+....     ..+|+||||+.++|.+.+..                      
T Consensus        61 ~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~----------------------  118 (359)
T cd07876          61 QTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIHM----------------------  118 (359)
T ss_pred             hhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccceeEEEEeCCCcCHHHHHhc----------------------
Confidence            445567789999999999999999999765322     35899999998888777641                      


Q ss_pred             CCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          87 PANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        87 ~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                     .+++.+++.++.||++|| +|||+..    .+.|++|.+
T Consensus       119 ---------------~~~~~~~~~~~~qi~~~L-~~LH~~~ivHrDlkp~NIl~  156 (359)
T cd07876         119 ---------------ELDHERMSYLLYQMLCGI-KHLHSAGIIHRDLKPSNIVV  156 (359)
T ss_pred             ---------------cCCHHHHHHHHHHHHHHH-HHHHhCCcccCCCCHHHEEE
Confidence                           477889999999999999 9999865    445777765

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.16  E-value=3.4e-10  Score=88.24  Aligned_cols=88  Identities=13%  Similarity=0.086  Sum_probs=71.2

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeec-CCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEEC-PDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~-~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      ...+.+++|+.+|++|+||||+++++.+++. .+.++++|||+. ++|.+.+....                        
T Consensus        46 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~~~------------------------  101 (266)
T cd06651          46 KEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLTIFMEYMPGGSVKDQLKAYG------------------------  101 (266)
T ss_pred             HHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEEEEEeCCCCCcHHHHHHHcC------------------------
Confidence            3457789999999999999999999977653 468999999995 69999997432                        


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                 .+++.+++.++.||+.|| +|||+..    .+-|++|++
T Consensus       102 -----------~l~~~~~~~~~~qi~~~l-~~LH~~~i~H~~l~p~nil~  139 (266)
T cd06651         102 -----------ALTESVTRKYTRQILEGM-SYLHSNMIVHRDIKGANILR  139 (266)
T ss_pred             -----------CCCHHHHHHHHHHHHHHH-HHHHhCCeeeCCCCHHHEEE
Confidence                       477888999999999999 9999654    234666653

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.15  E-value=3.3e-10  Score=86.43  Aligned_cols=89  Identities=15%  Similarity=0.115  Sum_probs=74.0

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ..+.+++|+..|.+++||||+++++.+.+ .+..+++|||+. ++|.+++.....                         
T Consensus        44 ~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~~i~e~~~~~~l~~~~~~~~~-------------------------   97 (258)
T smart00219       44 QIEEFLREARIMRKLDHPNIVKLLGVCTE-EEPLMIVMEYMEGGDLLDYLRKNRP-------------------------   97 (258)
T ss_pred             HHHHHHHHHHHHHhcCCCchheEEEEEcC-CCeeEEEEeccCCCCHHHHHHhhhh-------------------------
Confidence            56788999999999999999999997764 578999999995 699999975321                         


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcceee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAFC  137 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~~  137 (138)
                              ..+++..+..++.||++|| +|||+..    .+-|++|++.
T Consensus        98 --------~~~~~~~~~~~~~ql~~~l-~~lh~~~~~h~dl~~~nil~~  137 (258)
T smart00219       98 --------KELSLSDLLSFALQIARGM-EYLESKNFIHRDLAARNCLVG  137 (258)
T ss_pred             --------ccCCHHHHHHHHHHHHHHH-HHHhcCCeeecccccceEEEc
Confidence                    1288999999999999999 9999864    3458887653

Phosphotransferases. Tyrosine-specific kinase subfamily.

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.15  E-value=8.9e-11  Score=96.35  Aligned_cols=85  Identities=16%  Similarity=0.126  Sum_probs=67.2

Q ss_pred             chHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          11 KETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPAN   89 (138)
Q Consensus        11 ~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (138)
                      .+...+.+.+|+.+|++|+||||+++++.++ ..+.+++||||+. ++|.+.                            
T Consensus       112 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~----------------------------  162 (353)
T PLN00034        112 EDTVRRQICREIEILRDVNHPNVVKCHDMFD-HNGEIQVLLEFMDGGSLEGT----------------------------  162 (353)
T ss_pred             cHHHHHHHHHHHHHHHhCCCCCcceeeeEec-cCCeEEEEEecCCCCccccc----------------------------
Confidence            4556678899999999999999999999776 4678999999996 466321                            


Q ss_pred             CCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          90 QSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        90 ~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                 ..+++..++.++.||+.|| +|||+..    .+.|++|.+
T Consensus       163 -----------~~~~~~~~~~i~~qi~~aL-~~LH~~~ivHrDlkp~NIll  201 (353)
T PLN00034        163 -----------HIADEQFLADVARQILSGI-AYLHRRHIVHRDIKPSNLLI  201 (353)
T ss_pred             -----------ccCCHHHHHHHHHHHHHHH-HHHHHCCEeecCCCHHHEEE
Confidence                       1356778889999999999 9999854    344766654

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.15  E-value=5e-10  Score=88.60  Aligned_cols=89  Identities=17%  Similarity=0.122  Sum_probs=72.8

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      ....+.+.+|+.+|++++||||+++++.++. .+.+++||||+. ++|..++.+..                        
T Consensus        50 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~l~~~~~~~~------------------------  104 (292)
T cd06644          50 EEELEDYMVEIEILATCNHPYIVKLLGAFYW-DGKLWIMIEFCPGGAVDAIMLELD------------------------  104 (292)
T ss_pred             HHHHHHHHHHHHHHHhCCCCcEeeeEEEEEe-CCeEEEEEecCCCCcHHHHHHhhc------------------------
Confidence            3456778999999999999999999998764 568999999996 58888776432                        


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                ..+++.++..++.||+.|| +|||+..    .+-|+++.+
T Consensus       105 ----------~~l~~~~~~~~~~ql~~~l-~~lH~~~i~H~dlkp~Nili  143 (292)
T cd06644         105 ----------RGLTEPQIQVICRQMLEAL-QYLHSMKIIHRDLKAGNVLL  143 (292)
T ss_pred             ----------CCCCHHHHHHHHHHHHHHH-HHHhcCCeeecCCCcceEEE
Confidence                      1588899999999999999 9999854    334777765

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.15  E-value=3.4e-10  Score=86.69  Aligned_cols=86  Identities=14%  Similarity=0.083  Sum_probs=72.3

Q ss_pred             HHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSAS   93 (138)
Q Consensus        15 ~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (138)
                      .+.+++|+..+++++||||+++++.+.+ .+.+|++|||+. ++|.+++....                           
T Consensus        42 ~~~~~~e~~~~~~l~~~~i~~~~~~~~~-~~~~~l~~e~~~~~~L~~~l~~~~---------------------------   93 (256)
T cd06612          42 LQEIIKEISILKQCDSPYIVKYYGSYFK-NTDLWIVMEYCGAGSVSDIMKITN---------------------------   93 (256)
T ss_pred             HHHHHHHHHHHHhCCCCcEeeeeeeeec-CCcEEEEEecCCCCcHHHHHHhCc---------------------------
Confidence            6789999999999999999999997764 678999999996 69999997432                           


Q ss_pred             CCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          94 RPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        94 ~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                             ..+++.+++.++.||++|| .|||+..    .+-|+++++
T Consensus        94 -------~~l~~~~~~~~~~~l~~~l-~~lh~~~i~H~dl~~~ni~~  132 (256)
T cd06612          94 -------KTLTEEEIAAILYQTLKGL-EYLHSNKKIHRDIKAGNILL  132 (256)
T ss_pred             -------cCCCHHHHHHHHHHHHHHH-HHHHHCCcccCCCCcceEEE
Confidence                   1588999999999999999 9999754    334777654

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.15  E-value=2.3e-10  Score=88.26  Aligned_cols=88  Identities=17%  Similarity=0.155  Sum_probs=72.5

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ..+.+.+|+.+|++|+||||+++++.+. +.+.+++||||+. ++|.+++....                          
T Consensus        45 ~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~--------------------------   97 (261)
T cd05148          45 KQQDFQKEVQALKRLRHKHLISLFAVCS-VGEPVYIITELMEKGSLLAFLRSPE--------------------------   97 (261)
T ss_pred             hHHHHHHHHHHHhcCCCcchhheeeeEe-cCCCeEEEEeecccCCHHHHHhcCC--------------------------
Confidence            3567899999999999999999999665 4678999999995 69999997432                          


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                             ...+++..+..++.||+.|| +|||+..    .+-|++|++
T Consensus        98 -------~~~~~~~~~~~~~~~i~~al-~~lH~~~i~h~dl~~~nilv  137 (261)
T cd05148          98 -------GQVLPVASLIDMACQVAEGM-AYLEEQNSIHRDLAARNILV  137 (261)
T ss_pred             -------CCCCCHHHHHHHHHHHHHHH-HHHHHCCeeccccCcceEEE
Confidence                   12578889999999999999 9999865    334777765

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.15  E-value=3.3e-10  Score=90.49  Aligned_cols=86  Identities=15%  Similarity=0.092  Sum_probs=71.2

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ..+.+.+|+.+|++++||||++++..++ +++.+++||||+. ++|.+++....                          
T Consensus        44 ~~~~~~~e~~~l~~~~~~~i~~~~~~~~-~~~~~~lv~e~~~g~~L~~~l~~~~--------------------------   96 (305)
T cd05609          44 QIQQVFVERDILTFAENPFVVSMFCSFE-TKRHLCMVMEYVEGGDCATLLKNIG--------------------------   96 (305)
T ss_pred             HHHHHHHHHHHHHhCCCCCeeeeEEEEe-cCCEEEEEEecCCCCcHHHHHHHcC--------------------------
Confidence            3467789999999999999999999776 4678999999996 69999997432                          


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                               .+++..+..++.||+.|| +|||+..    .+-|+++.+
T Consensus        97 ---------~~~~~~~~~~~~~i~~~l-~~lH~~~i~H~dl~p~NIll  134 (305)
T cd05609          97 ---------ALPVDMARMYFAETVLAL-EYLHNYGIVHRDLKPDNLLI  134 (305)
T ss_pred             ---------CCCHHHHHHHHHHHHHHH-HHHHHCCccccCCchHHEEE
Confidence                     478889999999999999 9999764    334777654

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.15  E-value=2e-10  Score=95.90  Aligned_cols=52  Identities=23%  Similarity=0.178  Sum_probs=44.5

Q ss_pred             HHHHHHHHHHHHhhhC-CCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhc
Q psy3822          13 TVTEILRLGVKQLEVY-RHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQ   65 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rL-rHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~   65 (138)
                      ...+.+.+|+.+|..| +||||+++++.+.+ .+..++||||+. ++|.+.+...
T Consensus        80 ~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~-~~~~~lv~E~~~~g~L~~~l~~~  133 (375)
T cd05104          80 TEREALMSELKVLSYLGNHINIVNLLGACTV-GGPTLVITEYCCYGDLLNFLRRK  133 (375)
T ss_pred             HHHHHHHHHHHHHHHhcCCcceeeeeeeecc-CCcceeeehhccCCcHHHHHHhc
Confidence            3456788999999999 89999999997764 678999999995 7999999753

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.15  E-value=3.1e-10  Score=89.70  Aligned_cols=86  Identities=15%  Similarity=0.062  Sum_probs=69.9

Q ss_pred             HHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          16 EILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASR   94 (138)
Q Consensus        16 e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (138)
                      ..+.+|+.+|++|+||||+++++.++ +...+++||||+. ++|.+.+.....                           
T Consensus        38 ~~~~~E~~il~~l~hp~i~~~~~~~~-~~~~~~lv~e~~~g~~L~~~~~~~~~---------------------------   89 (277)
T cd05607          38 KMALLEKEILEKVNSPFIVNLAYAFE-SKTHLCLVMSLMNGGDLKYHIYNVGE---------------------------   89 (277)
T ss_pred             HHHHHHHHHHHhcCCCcEEEEEEEEe-cCCeEEEEEecCCCCCHHHHHHhccc---------------------------
Confidence            34567999999999999999999776 4778999999995 699888864321                           


Q ss_pred             CcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          95 PTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        95 ~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                            ..+++..+..++.||+.|| +|||+..    .+.|++|++
T Consensus        90 ------~~~~~~~~~~~~~qi~~al-~~lH~~~ivH~dikp~Nili  128 (277)
T cd05607          90 ------RGLEMERVIHYSAQITCGI-LHLHSMDIVYRDMKPENVLL  128 (277)
T ss_pred             ------cCCCHHHHHHHHHHHHHHH-HHHHHCCEEEccCChHhEEE
Confidence                  1477888899999999999 9999854    445887765

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.15  E-value=3.5e-10  Score=88.17  Aligned_cols=103  Identities=13%  Similarity=0.066  Sum_probs=76.2

Q ss_pred             chHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          11 KETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPAN   89 (138)
Q Consensus        11 ~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (138)
                      .....+.+++|+++|++++||||+++++.+++ .+.+++||||+. ++|.+++........            ...+   
T Consensus        48 ~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~i~~~~~~~~------------~~~~---  111 (280)
T cd05049          48 SNDARKDFEREAELLTNFQHENIVKFYGVCTE-GDPPIMVFEYMEHGDLNKFLRSHGPDAA------------FLKS---  111 (280)
T ss_pred             CHHHHHHHHHHHHHHHhcCCCCchheeeEEec-CCCeEEEEecCCCCCHHHHHHhcCCchh------------hhcc---
Confidence            34456788999999999999999999997764 578999999995 799999975431100            0000   


Q ss_pred             CCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          90 QSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        90 ~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                            .......+++.++..++.||+.|| .|||+..    .+-|+++.+
T Consensus       112 ------~~~~~~~l~~~~~~~~~~~i~~~l-~~lH~~~i~h~dlkp~nili  155 (280)
T cd05049         112 ------PDSPMGELTLSQLLQIAVQIASGM-VYLASQHFVHRDLATRNCLV  155 (280)
T ss_pred             ------cccccccccHHHHHHHHHHHHHHH-HHHhhCCeeccccccceEEE
Confidence                  001123588999999999999999 9999865    334777654

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.15  E-value=4.1e-10  Score=85.73  Aligned_cols=88  Identities=22%  Similarity=0.212  Sum_probs=73.0

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      +...+.+.+|+..|.+++||||+++++.+.+ .+.++++||++. ++|.+++....                        
T Consensus        40 ~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~~v~e~~~~~~L~~~~~~~~------------------------   94 (254)
T cd06627          40 EEALKSIMQEIDLLKNLKHPNIVKYIGSIET-SDSLYIILEYAENGSLRQIIKKFG------------------------   94 (254)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCccEEEEEEEe-CCEEEEEEecCCCCcHHHHHHhcc------------------------
Confidence            3566889999999999999999999997764 678999999996 59999987432                        


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                 .+++..+..++.|++.|| .|||+..    .+-|++|+.
T Consensus        95 -----------~l~~~~~~~~~~~i~~~l-~~lH~~~i~H~dl~p~ni~i  132 (254)
T cd06627          95 -----------PFPESLVAVYVYQVLQGL-AYLHEQGVIHRDIKAANILT  132 (254)
T ss_pred             -----------CCCHHHHHHHHHHHHHHH-HHHhhCCcccCCCCHHHEEE
Confidence                       588999999999999999 9999754    334666654

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.15  E-value=4.8e-10  Score=89.05  Aligned_cols=99  Identities=16%  Similarity=0.181  Sum_probs=75.8

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      +...+.+.+|+..|++|+||||+++++.+.+ .+.++++|||+. ++|.+++........                    
T Consensus        60 ~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~--------------------  118 (296)
T cd05095          60 KNARNDFLKEIKIMSRLKDPNIIRLLAVCIT-SDPLCMITEYMENGDLNQFLSRHEPQEA--------------------  118 (296)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CCccEEEEEeCCCCcHHHHHHhcCcccc--------------------
Confidence            4456788999999999999999999997764 678999999995 799999975432100                    


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                          ........+++..+..++.||+.|| +|||+..    .+.|++|.+
T Consensus       119 ----~~~~~~~~~~~~~~~~~~~~i~~al-~~lH~~~i~H~dlkp~Nili  163 (296)
T cd05095         119 ----AEKADVVTISYSTLIFMATQIASGM-KYLSSLNFVHRDLATRNCLV  163 (296)
T ss_pred             ----cccccccccCHHHHHHHHHHHHHHH-HHHHHCCeecccCChheEEE
Confidence                0001112588889999999999999 9999864    445888765

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.15  E-value=2.1e-10  Score=90.26  Aligned_cols=87  Identities=16%  Similarity=0.086  Sum_probs=68.3

Q ss_pred             HHHHHHHHHhhhC---CCCCeeEEeceeee----cCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          16 EILRLGVKQLEVY---RHPKILSVLHPIEE----CPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPA   88 (138)
Q Consensus        16 e~lrrEi~~L~rL---rHPnIL~l~e~~ee----~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (138)
                      ....+|+..|++|   +||||+++++.+..    ....+++|||++.++|.+++.....                     
T Consensus        46 ~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~---------------------  104 (290)
T cd07862          46 LSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPE---------------------  104 (290)
T ss_pred             HHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCCCcEEEEEccCCCCHHHHHHhCCC---------------------
Confidence            4456788877766   69999999986642    2357999999999999999874321                     


Q ss_pred             CCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          89 NQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        89 ~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                  ..+++.+++.++.||++|| .|||+..    .+.|++|.+
T Consensus       105 ------------~~~~~~~~~~i~~qi~~aL-~~lH~~~iiH~dlkp~Nil~  143 (290)
T cd07862         105 ------------PGVPTETIKDMMFQLLRGL-DFLHSHRVVHRDLKPQNILV  143 (290)
T ss_pred             ------------CCCCHHHHHHHHHHHHHHH-HHHHHCCeeeCCCCHHHEEE
Confidence                        1478899999999999999 9999854    445888765

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.14  E-value=4.7e-10  Score=86.07  Aligned_cols=88  Identities=13%  Similarity=0.126  Sum_probs=71.0

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      .....+.+|+.+|++++||||+++++... ..+..++||||+. ++|.+++....                         
T Consensus        34 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~-------------------------   87 (250)
T cd05085          34 ELKIKFLSEARILKQYDHPNIVKLIGVCT-QRQPIYIVMELVPGGDFLSFLRKKK-------------------------   87 (250)
T ss_pred             HHHHHHHHHHHHHHhCCCCCcCeEEEEEe-cCCccEEEEECCCCCcHHHHHHhcC-------------------------
Confidence            34456789999999999999999999665 4678999999995 79998886332                         


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                               ..+++.++..++.||++|| .|||+..    .+-|+++++
T Consensus        88 ---------~~~~~~~~~~~~~~i~~~l-~~lH~~~~~H~dl~p~nili  126 (250)
T cd05085          88 ---------DELKTKQLVKFALDAAAGM-AYLESKNCIHRDLAARNCLV  126 (250)
T ss_pred             ---------CCCCHHHHHHHHHHHHHHH-HHHHhCCeeecccChheEEE
Confidence                     1478889999999999999 9999764    445777764

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.14  E-value=7.1e-10  Score=87.63  Aligned_cols=111  Identities=16%  Similarity=0.118  Sum_probs=75.2

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      ...+.+.+|++.|++|+||||+++++.+.+ .+..+++|||+. ++|.+++........+    ..+.....     +  
T Consensus        45 ~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~----~~~~~~~~-----~--  112 (290)
T cd05045          45 SELRDLLSEFNLLKQVNHPHVIKLYGACSQ-DGPLLLIVEYAKYGSLRSFLRESRKVGPS----YLGSDGNR-----N--  112 (290)
T ss_pred             HHHHHHHHHHHHHhhCCCCCEeeEEEEEec-CCCcEEEEEecCCCCHHHHHHhcCCcccc----cccccccc-----c--
Confidence            345778999999999999999999997764 567999999995 7999999754321100    00000000     0  


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                      +..........+++..+..++.||++|| +|||+..    .+-|+++.+
T Consensus       113 ~~~~~~~~~~~l~~~~~~~i~~~i~~~l-~~LH~~~ivH~dikp~nill  160 (290)
T cd05045         113 SSYLDNPDERALTMGDLISFAWQISRGM-QYLAEMKLVHRDLAARNVLV  160 (290)
T ss_pred             cccccCccccccCHHHHHHHHHHHHHHH-HHHHHCCeehhhhhhheEEE
Confidence            0000001122688899999999999999 9999754    334888765

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>KOG0592|consensus

Probab=99.14  E-value=1.2e-10  Score=104.34  Aligned_cols=89  Identities=17%  Similarity=0.257  Sum_probs=77.2

Q ss_pred             chHHHHHHHHHHHHhhhC-CCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          11 KETVTEILRLGVKQLEVY-RHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPA   88 (138)
Q Consensus        11 ~e~~~e~lrrEi~~L~rL-rHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (138)
                      +|.-++.+.+|=..|.+| .||.|++||.-|.+ ..+||||+||+. |+|.++|++.+                      
T Consensus       113 ke~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD-~~sLYFvLe~A~nGdll~~i~K~G----------------------  169 (604)
T KOG0592|consen  113 KEKKVKYVTREKEALTQLSGHPGIVKLYFTFQD-EESLYFVLEYAPNGDLLDLIKKYG----------------------  169 (604)
T ss_pred             hhcccchhhHHHHHHHHhhCCCCeEEEEEEeec-ccceEEEEEecCCCcHHHHHHHhC----------------------
Confidence            455567788999999999 89999999999985 568999999994 89999999764                      


Q ss_pred             CCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          89 NQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        89 ~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                   .|+|..++++..||+.|| +|||+++    .+.|.+|.+
T Consensus       170 -------------sfde~caR~YAAeIldAl-eylH~~GIIHRDlKPENILL  207 (604)
T KOG0592|consen  170 -------------SFDETCARFYAAEILDAL-EYLHSNGIIHRDLKPENILL  207 (604)
T ss_pred             -------------cchHHHHHHHHHHHHHHH-HHHHhcCceeccCChhheeE
Confidence                         699999999999999999 9999976    566887754

>KOG0593|consensus

Probab=99.14  E-value=5.8e-11  Score=101.27  Aligned_cols=88  Identities=11%  Similarity=0.089  Sum_probs=73.9

Q ss_pred             ccCCCCcchHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCC
Q psy3822           4 KLHKPKRKETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGS   83 (138)
Q Consensus         4 k~~K~~~~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~   83 (138)
                      |+-...+...+-++..|||.+|+.|+|||+|.+.|+|-. +..+++|.|||..++-+-|...++                
T Consensus        34 kF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrr-krklhLVFE~~dhTvL~eLe~~p~----------------   96 (396)
T KOG0593|consen   34 KFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRR-KRKLHLVFEYCDHTVLHELERYPN----------------   96 (396)
T ss_pred             eeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHh-cceeEEEeeecchHHHHHHHhccC----------------
Confidence            333334556778899999999999999999999998874 678999999999877777765442                


Q ss_pred             CCCCCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC
Q psy3822          84 SPPPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS  127 (138)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a  127 (138)
                                        .+++.-++.++.|+++|+ .|||.+.
T Consensus        97 ------------------G~~~~~vk~~l~Q~l~ai-~~cHk~n  121 (396)
T KOG0593|consen   97 ------------------GVPSELVKKYLYQLLKAI-HFCHKNN  121 (396)
T ss_pred             ------------------CCCHHHHHHHHHHHHHHh-hhhhhcC
Confidence                              578899999999999999 9999876

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.14  E-value=4.5e-10  Score=86.72  Aligned_cols=90  Identities=12%  Similarity=0.021  Sum_probs=70.3

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      ....+.+.+|+.+|++++||||+++++...+..+..+++|||+. ++|.+++....                        
T Consensus        37 ~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~------------------------   92 (262)
T cd05058          37 LEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMKHGDLRNFIRSET------------------------   92 (262)
T ss_pred             HHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCCCCCHHHHHHhcC------------------------
Confidence            34567888999999999999999999965444556899999995 79999987432                        


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                ..+++.++..++.||++|| .|||+..    .+.|++|.+
T Consensus        93 ----------~~~~~~~~~~~~~~i~~~l-~~lH~~~i~H~dlk~~nili  131 (262)
T cd05058          93 ----------HNPTVKDLIGFGLQVAKGM-EYLASKKFVHRDLAARNCML  131 (262)
T ss_pred             ----------CCCCHHHHHHHHHHHHHHH-HHHHhCCccccccCcceEEE
Confidence                      1356667888899999999 9999854    344777654

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.14  E-value=2e-10  Score=90.68  Aligned_cols=89  Identities=17%  Similarity=0.106  Sum_probs=70.2

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecC---------CeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECP---------DALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGS   83 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~---------~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~   83 (138)
                      .....+++|+..+++++||||+++++.+.+..         ..+++||||+.++|.+.+....                 
T Consensus        48 ~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~-----------------  110 (302)
T cd07864          48 GFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDFKKDKGAFYLVFEYMDHDLMGLLESGL-----------------  110 (302)
T ss_pred             CchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhccccCCcEEEEEcccCccHHHHHhcCC-----------------
Confidence            34456789999999999999999998765432         3799999999888888776321                 


Q ss_pred             CCCCCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          84 SPPPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                       ..+++.++..++.||+.|| .|||+..    .+-|++|++
T Consensus       111 -----------------~~~~~~~~~~i~~qi~~aL-~~LH~~~i~H~dl~p~nili  149 (302)
T cd07864         111 -----------------VHFSEDHIKSFMKQLLEGL-NYCHKKNFLHRDIKCSNILL  149 (302)
T ss_pred             -----------------CCCCHHHHHHHHHHHHHHH-HHHHhCCeecCCCCHHHEEE
Confidence                             1588899999999999999 9999864    334666543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.14  E-value=3.6e-10  Score=92.05  Aligned_cols=88  Identities=11%  Similarity=0.107  Sum_probs=72.6

Q ss_pred             hHHHHHHHHHHHHhhhC-CCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVY-RHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPAN   89 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rL-rHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (138)
                      +...+.+++|+.++.++ +||||+++++.++ +.+.+|+||||+. ++|.+.+....                       
T Consensus        36 ~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~-----------------------   91 (327)
T cd05617          36 DEDIDWVQTEKHVFEQASSNPFLVGLHSCFQ-TTSRLFLVIEYVNGGDLMFHMQRQR-----------------------   91 (327)
T ss_pred             hhHHHHHHHHHHHHHhhcCCCCEeeEEEEEE-eCCEEEEEEeCCCCCcHHHHHHHcC-----------------------
Confidence            34567789999999998 6999999999776 4678999999995 69988886332                       


Q ss_pred             CCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          90 QSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        90 ~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                  .+++.+++.++.||+.|| +|||+..    .+.|++|.+
T Consensus        92 ------------~l~~~~~~~~~~qi~~al-~~lH~~~ivHrDlkp~Nili  129 (327)
T cd05617          92 ------------KLPEEHARFYAAEICIAL-NFLHERGIIYRDLKLDNVLL  129 (327)
T ss_pred             ------------CCCHHHHHHHHHHHHHHH-HHHHHCCeeccCCCHHHEEE
Confidence                        588999999999999999 9999854    445777765

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.14  E-value=1.6e-10  Score=92.33  Aligned_cols=86  Identities=20%  Similarity=0.138  Sum_probs=70.4

Q ss_pred             HHHHHHHHHhhhCCCCCeeEEeceeeecC-CeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          16 EILRLGVKQLEVYRHPKILSVLHPIEECP-DALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASR   94 (138)
Q Consensus        16 e~lrrEi~~L~rLrHPnIL~l~e~~ee~~-~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (138)
                      ..+.+|+.+|++++||||+++++.+++.. +.+++||||+.++|.+++....                            
T Consensus        51 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~----------------------------  102 (309)
T cd07845          51 ISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFLVMEYCEQDLASLLDNMP----------------------------  102 (309)
T ss_pred             chhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEEEEecCCCCHHHHHHhcc----------------------------
Confidence            34568999999999999999999876533 5799999999989999987431                            


Q ss_pred             CcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          95 PTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        95 ~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                            ..+++.++..++.||++|| .|||+..    .+-|+++++
T Consensus       103 ------~~l~~~~~~~~~~qi~~~l-~~lH~~~i~H~dl~p~nil~  141 (309)
T cd07845         103 ------TPFSESQVKCLMLQLLRGL-QYLHENFIIHRDLKVSNLLL  141 (309)
T ss_pred             ------cCCCHHHHHHHHHHHHHHH-HHHHhCCeecCCCCHHHEEE
Confidence                  1588999999999999999 9999865    334776654

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.13  E-value=3.6e-10  Score=87.95  Aligned_cols=88  Identities=14%  Similarity=0.098  Sum_probs=72.1

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeec-CCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEEC-PDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~-~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      ...+.+++|+..|++|+||||+++++.+.+. .+.++++|||+. ++|.+.+....                        
T Consensus        46 ~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~------------------------  101 (264)
T cd06653          46 KEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKLSIFVEYMPGGSIKDQLKAYG------------------------  101 (264)
T ss_pred             HHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEEEEEEEeCCCCcHHHHHHHcC------------------------
Confidence            4557889999999999999999999977643 357999999995 69999987432                        


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                 .+++..++.++.||++|| .|||+..    .+-|++|++
T Consensus       102 -----------~l~~~~~~~~~~~i~~al-~~LH~~~i~H~dl~p~ni~i  139 (264)
T cd06653         102 -----------ALTENVTRRYTRQILQGV-SYLHSNMIVHRDIKGANILR  139 (264)
T ss_pred             -----------CCCHHHHHHHHHHHHHHH-HHHHhCCEecCCCCHHHEEE
Confidence                       478889999999999999 9999765    344777764

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.13  E-value=2.9e-10  Score=94.88  Aligned_cols=85  Identities=8%  Similarity=0.076  Sum_probs=71.6

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ..+.+.+|+.+|+.++||||+++++.+++ .+.+++||||+. ++|.+++...                           
T Consensus        86 ~~~~~~~e~~i~~~~~hp~iv~~~~~~~~-~~~~~lv~Ey~~gg~L~~~~~~~---------------------------  137 (371)
T cd05622          86 DSAFFWEERDIMAFANSPWVVQLFYAFQD-DRYLYMVMEYMPGGDLVNLMSNY---------------------------  137 (371)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCeEEEEEEc-CCEEEEEEcCCCCCcHHHHHHhc---------------------------
Confidence            34567899999999999999999998764 678999999995 7999998632                           


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                               .+++.+++.++.||+.|| +|||+..    .+.|++|.+
T Consensus       138 ---------~~~~~~~~~~~~qi~~aL-~~LH~~~ivHrDLkp~NIll  175 (371)
T cd05622         138 ---------DVPEKWARFYTAEVVLAL-DAIHSMGFIHRDVKPDNMLL  175 (371)
T ss_pred             ---------CCCHHHHHHHHHHHHHHH-HHHHHCCEEeCCCCHHHEEE
Confidence                     478889999999999999 9999864    455877765

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.13  E-value=2.9e-10  Score=92.18  Aligned_cols=85  Identities=19%  Similarity=0.283  Sum_probs=67.4

Q ss_pred             HHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSAS   93 (138)
Q Consensus        15 ~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (138)
                      .+.++.+..+|+.++||||+++++.++ +.+.+|+||||+. ++|.+++....                           
T Consensus        40 ~~~~~e~~~~l~~~~h~~Iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~---------------------------   91 (325)
T cd05602          40 KHIMSERNVLLKNVKHPFLVGLHFSFQ-TADKLYFVLDYINGGELFYHLQRER---------------------------   91 (325)
T ss_pred             HHHHHHHHHHHHhCCCCCCCceeEEEE-cCCeEEEEEeCCCCCcHHHHHHhcC---------------------------
Confidence            344445555678899999999999776 4678999999995 69999887432                           


Q ss_pred             CCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          94 RPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        94 ~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                              .+++..++.++.||++|| +|||+..    .+.|++|.+
T Consensus        92 --------~~~~~~~~~~~~qi~~~L-~~lH~~giiHrDlkp~Nili  129 (325)
T cd05602          92 --------CFLEPRARFYAAEIASAL-GYLHSLNIVYRDLKPENILL  129 (325)
T ss_pred             --------CCCHHHHHHHHHHHHHHH-HHHHHCCeEecCCCHHHeEE
Confidence                    578889999999999999 9999865    445777765

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.13  E-value=5.8e-10  Score=87.58  Aligned_cols=92  Identities=12%  Similarity=0.082  Sum_probs=72.7

Q ss_pred             HHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSAS   93 (138)
Q Consensus        15 ~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (138)
                      ...+.+|+..|++++||||+++++...+ .+..++||||+. ++|.+++.......                        
T Consensus        53 ~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~lv~e~~~g~~L~~~i~~~~~~~------------------------  107 (277)
T cd05036          53 ESDFLMEALIMSKFNHQNIVRLIGVSFE-RLPRFILLELMAGGDLKSFLRENRPRP------------------------  107 (277)
T ss_pred             HHHHHHHHHHHHhCCCCCEeeEEEEEcc-CCCcEEEEecCCCCCHHHHHHHhCCCC------------------------
Confidence            3557889999999999999999996664 567899999995 79999997543110                        


Q ss_pred             CCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          94 RPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        94 ~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                          .....+++.++..++.||++|| +|||+..    .+-|++|++
T Consensus       108 ----~~~~~~~~~~~~~~~~qi~~~l-~~LH~~~ivH~dlkp~nil~  149 (277)
T cd05036         108 ----ERPSSLTMKDLLFCARDVAKGC-KYLEENHFIHRDIAARNCLL  149 (277)
T ss_pred             ----CCCCCCCHHHHHHHHHHHHHHH-HHHHHCCEeecccchheEEE
Confidence                0112588999999999999999 9999865    344888776

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.13  E-value=3e-10  Score=90.77  Aligned_cols=90  Identities=13%  Similarity=0.134  Sum_probs=74.1

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      ...+.+.+|+..|.+++||||+++++.+++ .+.+++||||+. ++|.+++....                         
T Consensus        43 ~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~-------------------------   96 (316)
T cd05574          43 NKVKRVLTEQEILATLDHPFLPTLYASFQT-ETYLCLVMDYCPGGELFRLLQRQP-------------------------   96 (316)
T ss_pred             HHHHHHHHHHHHHHhCCCCCchhheeeeec-CCEEEEEEEecCCCCHHHHHHhCC-------------------------
Confidence            355778999999999999999999997764 678999999995 69999987432                         


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcceee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAFC  137 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~~  137 (138)
                              ...+++..++.++.||++|| .|||+..    .+-|++|++.
T Consensus        97 --------~~~l~~~~~~~~~~qi~~~l-~~lH~~~i~H~dlkp~Nili~  137 (316)
T cd05574          97 --------GKCLSEEVARFYAAEVLLAL-EYLHLLGIVYRDLKPENILLH  137 (316)
T ss_pred             --------CCccCHHHHHHHHHHHHHHH-HHHHHCCeeccCCChHHeEEc
Confidence                    12589999999999999999 9999754    3458887753

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.13  E-value=1.7e-10  Score=88.38  Aligned_cols=88  Identities=16%  Similarity=0.127  Sum_probs=71.5

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ..+.+++|+.+|++++||||+++++.+++ .+.+++++||+. ++|.+++.....                         
T Consensus        42 ~~~~~~~E~~~l~~~~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~~-------------------------   95 (257)
T cd08225          42 EKEASKKEVILLAKMKHPNIVTFFASFQE-NGRLFIVMEYCDGGDLMKRINRQRG-------------------------   95 (257)
T ss_pred             hhHHHHHHHHHHHhCCCCChhhhhheecc-CCeEEEEEecCCCCcHHHHHHhccC-------------------------
Confidence            34678899999999999999999997764 678999999995 699999874321                         


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                              ..+++..+..++.||++|| .|||+..    .+-|++|..
T Consensus        96 --------~~~~~~~~~~~~~~l~~~l-~~lh~~~i~H~dl~~~nil~  134 (257)
T cd08225          96 --------VLFSEDQILSWFVQISLGL-KHIHDRKILHRDIKSQNIFL  134 (257)
T ss_pred             --------CCCCHHHHHHHHHHHHHHH-HHHHHCCcccccCCHHHEEE
Confidence                    2578899999999999999 9999754    334666553

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>KOG0594|consensus

Probab=99.13  E-value=1.7e-10  Score=97.85  Aligned_cols=93  Identities=15%  Similarity=0.091  Sum_probs=76.0

Q ss_pred             chHHHHHHHHHHHHhhhCCCCC-eeEEeceeeecCC-----eEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCC
Q psy3822          11 KETVTEILRLGVKQLEVYRHPK-ILSVLHPIEECPD-----ALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSS   84 (138)
Q Consensus        11 ~e~~~e~lrrEi~~L~rLrHPn-IL~l~e~~ee~~~-----~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~   84 (138)
                      .|.+.....||+.+|++|+|+| |+.+++.+.....     .+++|+||+.-+|..++.......               
T Consensus        50 ~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~l~lvfe~~d~DL~~ymd~~~~~~---------------  114 (323)
T KOG0594|consen   50 EEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGKLYLVFEFLDRDLKKYMDSLPKKP---------------  114 (323)
T ss_pred             ccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccceEEEEEEeecccHHHHHHhccccc---------------
Confidence            3567788899999999999999 9999998775432     899999999999999998654210               


Q ss_pred             CCCCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcce
Q psy3822          85 PPPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVA  135 (138)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~  135 (138)
                                      ..++...||.++.||+.|| +|||++.    .+.|.++.
T Consensus       115 ----------------~g~~~~~ik~~m~Qll~gl-~~~H~~~IlHRDLKPQNlL  152 (323)
T KOG0594|consen  115 ----------------QGLPPRLIKSFMRQLLRGL-AFLHSHGILHRDLKPQNLL  152 (323)
T ss_pred             ----------------cCCCHHHHHHHHHHHHHHH-HHHHhCCeecccCCcceEE
Confidence                            1456689999999999999 9999976    55676654

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.13  E-value=3.9e-10  Score=91.96  Aligned_cols=88  Identities=13%  Similarity=0.034  Sum_probs=73.0

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      ...+.+++|+.++.+++||||+++++.++ +.+.+|+||||+. ++|.+++....                         
T Consensus        43 ~~~~~~~~e~~~l~~~~~~~i~~l~~~~~-~~~~~~lv~Ey~~gg~L~~~l~~~~-------------------------   96 (331)
T cd05624          43 AETACFREERNVLVNGDCQWITTLHYAFQ-DENYLYLVMDYYVGGDLLTLLSKFE-------------------------   96 (331)
T ss_pred             HHHHHHHHHHHHHHhCCCCCEeeEEEEEE-cCCEEEEEEeCCCCCcHHHHHHHhc-------------------------
Confidence            34567899999999999999999999776 4679999999995 79999997532                         


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                               ..+++..++.++.||+.|| +|||+..    .+.|++|.+
T Consensus        97 ---------~~l~~~~~~~~~~qi~~~L-~~lH~~~iiHrDlkp~Nill  135 (331)
T cd05624          97 ---------DRLPEDMARFYIAEMVLAI-HSIHQLHYVHRDIKPDNVLL  135 (331)
T ss_pred             ---------CCCCHHHHHHHHHHHHHHH-HHHHHCCeeeccCchHHEEE
Confidence                     1578899999999999999 9999754    345777654

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.13  E-value=4.1e-10  Score=87.32  Aligned_cols=88  Identities=17%  Similarity=0.195  Sum_probs=71.8

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      ....+.+.+|+.+|+++.||||+++++..+  .+..++||||+. ++|.+++....                        
T Consensus        37 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~------------------------   90 (257)
T cd05116          37 PALKDELLREANVMQQLDNPYIVRMIGICE--AESWMLVMELAELGPLNKFLQKNK------------------------   90 (257)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCcceEEEEEc--CCCcEEEEecCCCCcHHHHHHhcC------------------------
Confidence            445678899999999999999999998553  357899999996 69999986422                        


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcceee
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAFC  137 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~~  137 (138)
                                 .+++..+..++.||+.|| +|||+..    .+.|++++++
T Consensus        91 -----------~~~~~~~~~i~~qi~~al-~~lH~~~i~H~dlkp~nill~  129 (257)
T cd05116          91 -----------HVTEKNITELVHQVSMGM-KYLEETNFVHRDLAARNVLLV  129 (257)
T ss_pred             -----------CCCHHHHHHHHHHHHHHH-HHHHHCCEeecccchhhEEEc
Confidence                       478889999999999999 9999765    3348887763

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.13  E-value=5.2e-10  Score=90.27  Aligned_cols=88  Identities=14%  Similarity=0.098  Sum_probs=72.5

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ...+.+.+|+.+|++++||||+++++.+++ .+..|+||||+.++|.+++....                          
T Consensus        63 ~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~~~~~l~~~l~~~~--------------------------  115 (313)
T cd06633          63 EKWQDIIKEVKFLQQLKHPNTIEYKGCYLK-EHTAWLVMEYCLGSASDLLEVHK--------------------------  115 (313)
T ss_pred             HHHHHHHHHHHHHHhCCCCCCccEEEEEEe-CCEEEEEEecCCCCHHHHHHhcC--------------------------
Confidence            344667889999999999999999997764 67899999999999988886432                          


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                              ..+++.++..++.||+.|| .|||+..    .+-|++|++
T Consensus       116 --------~~l~~~~~~~~~~qi~~al-~~LH~~gi~H~dl~p~nili  154 (313)
T cd06633         116 --------KPLQEVEIAAITHGALQGL-AYLHSHNMIHRDIKAGNILL  154 (313)
T ss_pred             --------CCCCHHHHHHHHHHHHHHH-HHHHHCCeecCCCChhhEEE
Confidence                    1578899999999999999 9999765    334777765

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.13  E-value=1.3e-10  Score=90.77  Aligned_cols=87  Identities=13%  Similarity=0.159  Sum_probs=69.8

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccccc-cHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYA-SLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~~-sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      ...+.+.+|+.+|++++||||+++++.++ +.+.+++||||+.+ +|.++....                          
T Consensus        42 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~l~~~~~~~--------------------------   94 (286)
T cd07846          42 MVKKIAMREIRMLKQLRHENLVNLIEVFR-RKKRLYLVFEFVDHTVLDDLEKYP--------------------------   94 (286)
T ss_pred             hhhHHHHHHHHHHHhcCCcchhhHHHhcc-cCCeEEEEEecCCccHHHHHHhcc--------------------------
Confidence            35567889999999999999999999876 47789999999974 665554421                          


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                               ..+++.+++.++.||++|| .|||+..    .+-|++|++
T Consensus        95 ---------~~~~~~~~~~~~~~i~~~l-~~LH~~~i~h~~l~p~ni~~  133 (286)
T cd07846          95 ---------NGLDESRVRKYLFQILRGI-EFCHSHNIIHRDIKPENILV  133 (286)
T ss_pred             ---------CCCCHHHHHHHHHHHHHHH-HHHHHCCccccCCCHHHEEE
Confidence                     1478899999999999999 9999865    334777765

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.13  E-value=3.5e-10  Score=88.00  Aligned_cols=88  Identities=13%  Similarity=-0.036  Sum_probs=72.1

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      ...+.+.+|+.+|+++.||||+.+++.+.. .+..++||||+. ++|.+++....                         
T Consensus        41 ~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~-------------------------   94 (258)
T cd05078          41 NYSESFFEAASMMSQLSHKHLVLNYGVCVC-GDESIMVQEYVKFGSLDTYLKKNK-------------------------   94 (258)
T ss_pred             HHHHHHHHHHHHHHhCCCCChhheeeEEEe-CCCcEEEEecCCCCcHHHHHhcCC-------------------------
Confidence            345677889999999999999999997764 568999999995 69999987432                         


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                               ..+++..+..++.||+.|| .|||+..    .+.|+++.+
T Consensus        95 ---------~~~~~~~~~~~~~qi~~~l-~~lH~~~iiH~dlkp~nili  133 (258)
T cd05078          95 ---------NLINISWKLEVAKQLAWAL-HFLEDKGLTHGNVCAKNVLL  133 (258)
T ss_pred             ---------CCCCHHHHHHHHHHHHHHH-HHHHHCCeecCCCccceEEE
Confidence                     1477888899999999999 9999865    345887765

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.13  E-value=1.8e-10  Score=90.06  Aligned_cols=91  Identities=16%  Similarity=0.108  Sum_probs=74.0

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      +...+.+.+|+..|++++||||+++++.+. +.+..+++|||+.++|.+++.....                        
T Consensus        39 ~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~-~~~~~~iv~e~~~~~l~~~~~~~~~------------------------   93 (283)
T cd07835          39 EGVPSTAIREISLLKELNHPNIVRLLDVVH-SENKLYLVFEFLDLDLKKYMDSSPL------------------------   93 (283)
T ss_pred             ccchhHHHHHHHHHHhcCCCCccCHhheec-cCCeEEEEEeccCcCHHHHHhhCCC------------------------
Confidence            344466788999999999999999999776 4689999999998899999874321                        


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcceee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAFC  137 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~~  137 (138)
                               ..+++..+..++.||++|| +|||+..    .+-|++|+++
T Consensus        94 ---------~~~~~~~~~~~~~~i~~~L-~~lH~~~~~H~dl~p~nil~~  133 (283)
T cd07835          94 ---------TGLDPPLIKSYLYQLLQGI-AYCHSHRVLHRDLKPQNLLID  133 (283)
T ss_pred             ---------CCCCHHHHHHHHHHHHHHH-HHHHHCCeeCCCCCHHHEEEc
Confidence                     2588999999999999999 9999864    3347777653

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.13  E-value=5.1e-10  Score=86.64  Aligned_cols=91  Identities=13%  Similarity=0.148  Sum_probs=72.9

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      .....+.+|+.+|++++||||+++++.+++ .+.+++||||+. ++|.+++......                       
T Consensus        44 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~~v~e~~~~~~L~~~~~~~~~~-----------------------   99 (267)
T cd08228          44 KARQDCVKEIDLLKQLNHPNVIKYLDSFIE-DNELNIVLELADAGDLSQMIKYFKKQ-----------------------   99 (267)
T ss_pred             HHHHHHHHHHHHHHhCCCcceeeeeeeEEE-CCeEEEEEEecCCCcHHHHHHHhhhc-----------------------
Confidence            445667889999999999999999997764 678999999996 6999998743211                       


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                              ...+++..+..++.||++|| .|||+..    .+-|++|.+
T Consensus       100 --------~~~~~~~~~~~~~~~i~~~l-~~LH~~~i~H~dl~~~nil~  139 (267)
T cd08228         100 --------KRLIPERTVWKYFVQLCSAV-EHMHSRRVMHRDIKPANVFI  139 (267)
T ss_pred             --------cCCCCHHHHHHHHHHHHHHH-HHHhhCCeeCCCCCHHHEEE
Confidence                    12578899999999999999 9999864    344777654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>KOG0584|consensus

Probab=99.13  E-value=1.5e-10  Score=104.71  Aligned_cols=81  Identities=20%  Similarity=0.160  Sum_probs=70.0

Q ss_pred             chHHHHHHHHHHHHhhhCCCCCeeEEeceeeecC-CeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          11 KETVTEILRLGVKQLEVYRHPKILSVLHPIEECP-DALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPA   88 (138)
Q Consensus        11 ~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~-~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (138)
                      .+..+++|..||.+|+.|.||||+++|..-+++. +.+-||||... |+|..++++..+                     
T Consensus        81 ~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL~TSGtLr~Y~kk~~~---------------------  139 (632)
T KOG0584|consen   81 SPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITELFTSGTLREYRKKHRR---------------------  139 (632)
T ss_pred             ChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeecccCCcHHHHHHHhcc---------------------
Confidence            3567899999999999999999999999877644 57999999995 899999997653                     


Q ss_pred             CCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC
Q psy3822          89 NQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS  127 (138)
Q Consensus        89 ~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a  127 (138)
                                    ++-.-+|.|..||++|| .|||+..
T Consensus       140 --------------vn~kaik~W~RQILkGL-~yLHs~~  163 (632)
T KOG0584|consen  140 --------------VNIKAIKSWCRQILKGL-VYLHSQD  163 (632)
T ss_pred             --------------CCHHHHHHHHHHHHHHh-hhhhcCC
Confidence                          34458999999999999 9999865

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.13  E-value=8.9e-10  Score=88.57  Aligned_cols=105  Identities=16%  Similarity=0.138  Sum_probs=75.9

Q ss_pred             hHHHHHHHHHHHHhhhC-CCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVY-RHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPAN   89 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rL-rHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (138)
                      ....+.+++|+.+|+++ +||||+++++.+. ..+.++++|||+. ++|.+++.......++.                 
T Consensus        58 ~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~-~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~-----------------  119 (314)
T cd05099          58 DKDLADLISEMELMKLIGKHKNIINLLGVCT-QEGPLYVIVEYAAKGNLREFLRARRPPGPDY-----------------  119 (314)
T ss_pred             hHHHHHHHHHHHHHHhccCCCCeeeEEEEEc-cCCceEEEEecCCCCcHHHHHHhcCCCcccc-----------------
Confidence            34466788999999999 6999999999765 4668999999995 79999997643210000                 


Q ss_pred             CCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcceee
Q psy3822          90 QSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAFC  137 (138)
Q Consensus        90 ~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~~  137 (138)
                        ........+..++..++..++.||+.|| .|||+..    .+.|++|.++
T Consensus       120 --~~~~~~~~~~~l~~~~~~~~~~qi~~aL-~~lH~~gi~H~dlkp~Nill~  168 (314)
T cd05099         120 --TFDITKVPEEQLSFKDLVSCAYQVARGM-EYLESRRCIHRDLAARNVLVT  168 (314)
T ss_pred             --cccccCCcccccCHHHHHHHHHHHHHHH-HHHHHCCeeeccccceeEEEc
Confidence              0000111223588889999999999999 9999854    4458887654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.13  E-value=5e-10  Score=87.15  Aligned_cols=88  Identities=16%  Similarity=0.091  Sum_probs=71.1

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      ...+.+.+|+.+|++++||||+++++.+. +.+.+++++||+. ++|.+.+.....                        
T Consensus        47 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~------------------------  101 (268)
T cd06624          47 RYVQPLHEEIALHSYLKHRNIVQYLGSDS-ENGFFKIFMEQVPGGSLSALLRSKWG------------------------  101 (268)
T ss_pred             HHHHHHHHHHHHHHhcCCCCeeeeeeeec-cCCEEEEEEecCCCCCHHHHHHHhcc------------------------
Confidence            34567899999999999999999999765 4678999999995 699999975321                        


Q ss_pred             CCCCcccccCCc--cHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          92 ASRPTHAREYHF--LDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        92 ~~~~~~~~~~~l--~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                .+  ++..+..++.||++|| .|||+..    .+-|++|.+
T Consensus       102 ----------~~~~~~~~~~~~~~qi~~al-~~lH~~~i~h~dl~p~nil~  141 (268)
T cd06624         102 ----------PLKDNEQTIIFYTKQILEGL-KYLHDNQIVHRDIKGDNVLV  141 (268)
T ss_pred             ----------cCCCcHHHHHHHHHHHHHHH-HHHHHCCEeecCCCHHHEEE
Confidence                      23  6778889999999999 9999754    334777665

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.13  E-value=7.3e-10  Score=87.03  Aligned_cols=89  Identities=17%  Similarity=0.173  Sum_probs=72.5

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      ....+.+.+|+.+|++++||||+++++.+.+ .+..++||||+. ++|..++....                        
T Consensus        43 ~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~-~~~~~~v~e~~~~~~l~~~~~~~~------------------------   97 (282)
T cd06643          43 EEELEDYMVEIDILASCDHPNIVKLLDAFYY-ENNLWILIEFCAGGAVDAVMLELE------------------------   97 (282)
T ss_pred             HHHHHHHHHHHHHHHHCCCCCeeeEEEEEee-CCEEEEEEEecCCCcHHHHHHhcC------------------------
Confidence            3445778899999999999999999997765 678999999995 68888776322                        


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                ..+++.++..++.||++|| .|||+..    .+.|+++.+
T Consensus        98 ----------~~l~~~~~~~~~~qi~~~L-~~LH~~~i~H~dlkp~nili  136 (282)
T cd06643          98 ----------RPLTEPQIRVVCKQTLEAL-NYLHENKIIHRDLKAGNILF  136 (282)
T ss_pred             ----------CCCCHHHHHHHHHHHHHHH-HHHHHCCeeecCCCcccEEE
Confidence                      1588899999999999999 9999854    445887754

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.12  E-value=2e-10  Score=89.25  Aligned_cols=89  Identities=15%  Similarity=0.142  Sum_probs=74.2

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ...+.+.+|++.|++++||||+++++.+. +.+.++++|||+.++|.+.+....                          
T Consensus        40 ~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~~~~~~~v~e~~~~~l~~~l~~~~--------------------------   92 (283)
T cd05118          40 GIPKTALREIKLLKELNHPNIIKLLDVFR-HKGDLYLVFEFMDTDLYKLIKDRQ--------------------------   92 (283)
T ss_pred             hhHHHHHHHHHHHHHhcCCCcchHHHhhc-cCCCEEEEEeccCCCHHHHHHhhc--------------------------
Confidence            45578889999999999999999999776 467899999999889988887532                          


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcceee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAFC  137 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~~  137 (138)
                              ..+++.++..++.||++|| .|||+..    .+-|++|.+.
T Consensus        93 --------~~~~~~~~~~~~~~i~~~l-~~LH~~~i~H~dl~p~nili~  132 (283)
T cd05118          93 --------RGLPESLIKSYLYQLLQGL-AFCHSHGILHRDLKPENLLIN  132 (283)
T ss_pred             --------ccCCHHHHHHHHHHHHHHH-HHHHHCCeeecCcCHHHEEEC
Confidence                    1588899999999999999 9999865    3447776653

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.12  E-value=4.9e-10  Score=89.59  Aligned_cols=105  Identities=17%  Similarity=0.154  Sum_probs=75.5

Q ss_pred             hHHHHHHHHHHHHhhhC-CCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVY-RHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPAN   89 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rL-rHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (138)
                      +.-.+.+.+|+.+|+++ +||||+++++.+.+ .+.+++||||+. ++|.+++........          ..-.     
T Consensus        64 ~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~i~~~~~~~~----------~~~~-----  127 (307)
T cd05098          64 EKDLSDLISEMEMMKMIGKHKNIINLLGACTQ-DGPLYVIVEYASKGNLREYLRARRPPGM----------EYCY-----  127 (307)
T ss_pred             hHHHHHHHHHHHHHHHhcCCCCEeeEEEEEec-CCceEEEEecCCCCcHHHHHHhcCCccc----------cccc-----
Confidence            44456788899999999 89999999997764 568999999995 799999975431100          0000     


Q ss_pred             CCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcceee
Q psy3822          90 QSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAFC  137 (138)
Q Consensus        90 ~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~~  137 (138)
                          ......+..++..++..++.||+.|| +|||+..    .+.|+++++.
T Consensus       128 ----~~~~~~~~~l~~~~~~~~~~qi~~aL-~~lH~~gi~H~dlkp~Nill~  174 (307)
T cd05098         128 ----NPTQVPEEQLSFKDLVSCAYQVARGM-EYLASKKCIHRDLAARNVLVT  174 (307)
T ss_pred             ----ccccCccccCCHHHHHHHHHHHHHHH-HHHHHCCcccccccHHheEEc
Confidence                00001122588889999999999999 9999754    3448887763

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.12  E-value=6e-10  Score=85.84  Aligned_cols=91  Identities=14%  Similarity=0.118  Sum_probs=74.1

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ..+.+.+|+.+|++++||||+++++.+++ .+.+++||||+. ++|.+++......                        
T Consensus        45 ~~~~~~~ei~~l~~~~~~~i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~------------------------   99 (267)
T cd08224          45 ARQDCLKEIDLLKQLDHPNVIKYLASFIE-NNELNIVLELADAGDLSRMIKHFKKQ------------------------   99 (267)
T ss_pred             hHHHHHHHHHHHHhCCCCCeeeeeeeeec-CCeEEEEEecCCCCCHHHHHHHhccc------------------------
Confidence            35778999999999999999999998875 678999999996 6999999753211                        


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcceee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAFC  137 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~~  137 (138)
                             ...+++..+..++.||++|| .|||+..    .+-|+++.++
T Consensus       100 -------~~~~~~~~~~~~~~~l~~~l-~~lh~~~i~h~dl~p~nil~~  140 (267)
T cd08224         100 -------KRLIPERTIWKYFVQLCSAL-EHMHSKRIMHRDIKPANVFIT  140 (267)
T ss_pred             -------CCCcCHHHHHHHHHHHHHHH-HHHHhCCEecCCcChhhEEEC
Confidence                   12578899999999999999 9999854    4457777653

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.12  E-value=5.6e-10  Score=88.32  Aligned_cols=101  Identities=14%  Similarity=0.104  Sum_probs=76.2

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      +...+.+.+|+.+|++++||||+++++.+.+ .+.+++||||+. ++|.+++.......             ..      
T Consensus        48 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~i~~~~~~~-------------~~------  107 (288)
T cd05093          48 DNARKDFHREAELLTNLQHEHIVKFYGVCVE-GDPLIMVFEYMKHGDLNKFLRAHGPDA-------------VL------  107 (288)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CCccEEEEEcCCCCCHHHHHHHcCCcc-------------cc------
Confidence            3456778999999999999999999997764 678999999995 79999997543100             00      


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                         .....+...+++..+..++.||+.|| +|||+..    .+.|++|.+
T Consensus       108 ---~~~~~~~~~l~~~~~~~~~~ql~~aL-~~lH~~~i~H~dlkp~Nili  153 (288)
T cd05093         108 ---MAEGNRPAELTQSQMLHIAQQIAAGM-VYLASQHFVHRDLATRNCLV  153 (288)
T ss_pred             ---ccccCCCCCCCHHHHHHHHHHHHHHH-HHHHhCCeeecccCcceEEE
Confidence               00001122589999999999999999 9999765    345888776

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.12  E-value=1.8e-10  Score=93.68  Aligned_cols=85  Identities=18%  Similarity=0.261  Sum_probs=69.5

Q ss_pred             HHHHHHHHHHhhhCCCCCeeEEeceeeecC-----CeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVYRHPKILSVLHPIEECP-----DALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPAN   89 (138)
Q Consensus        15 ~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~-----~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (138)
                      .+.+.+|+.+|++++||||+++++.+....     ..+|++||++.++|.+++...                        
T Consensus        58 ~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~------------------------  113 (343)
T cd07878          58 ARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFNEVYLVTNLMGADLNNIVKCQ------------------------  113 (343)
T ss_pred             HHHHHHHHHHHHhcCCCchhhhhhhhcccccccccCcEEEEeecCCCCHHHHHhcC------------------------
Confidence            456778999999999999999998765321     358999999989998887521                        


Q ss_pred             CCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          90 QSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        90 ~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                  .+++.+++.++.||++|| +|||+..    .+.|++|.+
T Consensus       114 ------------~l~~~~~~~i~~qi~~aL-~~LH~~~ivHrdikp~Nil~  151 (343)
T cd07878         114 ------------KLSDEHVQFLIYQLLRGL-KYIHSAGIIHRDLKPSNVAV  151 (343)
T ss_pred             ------------CCCHHHHHHHHHHHHHHH-HHHHHCCeecccCChhhEEE
Confidence                        588899999999999999 9999864    445877765

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.12  E-value=8e-10  Score=86.00  Aligned_cols=98  Identities=9%  Similarity=0.014  Sum_probs=74.0

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      .....+.+|+++|++++||||+++++.+++ .+.+++||||+. ++|.+++........                     
T Consensus        51 ~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~~~v~e~~~~~~L~~~l~~~~~~~~---------------------  108 (277)
T cd05032          51 RERIEFLNEASVMKEFNCHHVVRLLGVVST-GQPTLVVMELMAKGDLKSYLRSRRPEAE---------------------  108 (277)
T ss_pred             HHHHHHHHHHHHHHhCCCCceeEEEEEEcC-CCCcEEEEecCCCCCHHHHHHhcccchh---------------------
Confidence            334567899999999999999999997664 678999999995 799999975432100                     


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcceee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAFC  137 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~~  137 (138)
                          .......+++..+..++.||+.|| .|||+..    .+.|++|++.
T Consensus       109 ----~~~~~~~~~~~~~~~~~~~i~~~l-~~lH~~~i~H~di~p~nill~  153 (277)
T cd05032         109 ----NNPGLGPPTLQKFIQMAAEIADGM-AYLAAKKFVHRDLAARNCMVA  153 (277)
T ss_pred             ----hccCCCCCCHHHHHHHHHHHHHHH-HHHHhCCccccccChheEEEc
Confidence                000112578889999999999999 9999754    3458887653

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.12  E-value=8.3e-10  Score=86.97  Aligned_cols=110  Identities=14%  Similarity=0.139  Sum_probs=75.0

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      ....+.+++|+.+|++|+||||+++++.++ ..+.++++|||+. ++|.+++.........    .++.  ....     
T Consensus        49 ~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~----~~~~--~~~~-----  116 (288)
T cd05050          49 ADMQADFQREAALMAEFDHPNIVKLLGVCA-VGKPMCLLFEYMAYGDLNEFLRHRSPRAQC----SLSH--STSS-----  116 (288)
T ss_pred             HHHHHHHHHHHHHHHhcCCCchheEEEEEc-CCCccEEEEecCCCCCHHHHHHHcCccccc----cccc--cccc-----
Confidence            344577899999999999999999999665 4668999999996 6999999754321000    0000  0000     


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                        ..........+++.++..++.||++|| .|||+..    .+-|++|++
T Consensus       117 --~~~~~~~~~~l~~~~~~~~~~~i~~aL-~~lH~~~i~H~dl~p~nil~  163 (288)
T cd05050         117 --ARKCGLNPLPLSCTEQLCIAKQVAAGM-AYLSERKFVHRDLATRNCLV  163 (288)
T ss_pred             --cccccccccccCHHHHHHHHHHHHHHH-HHHHhCCeecccccHhheEe
Confidence              000001112588999999999999999 9999754    334777654

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.12  E-value=3.7e-10  Score=92.20  Aligned_cols=87  Identities=15%  Similarity=0.154  Sum_probs=71.4

Q ss_pred             HHHHHHHHHHHHhhhC-CCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVY-RHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rL-rHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      ...+.+++|+.+|.++ +||||+++++.++ +.+.+++||||+. ++|.+.+....                        
T Consensus        37 ~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~-~~~~~~lv~E~~~~~~L~~~~~~~~------------------------   91 (329)
T cd05618          37 EDIDWVQTEKHVFEQASNHPFLVGLHSCFQ-TESRLFFVIEYVNGGDLMFHMQRQR------------------------   91 (329)
T ss_pred             hHHHHHHHHHHHHHhcCCCCcCCceeeEEE-eCCEEEEEEeCCCCCCHHHHHHHcC------------------------
Confidence            4556788999999887 7999999999776 4679999999995 69988876432                        


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                 .+++.+++.++.||+.|| +|||+..    .+.|++|.+
T Consensus        92 -----------~l~~~~~~~i~~qi~~~l-~~lH~~~ivH~Dikp~Nili  129 (329)
T cd05618          92 -----------KLPEEHARFYSAEISLAL-NYLHERGIIYRDLKLDNVLL  129 (329)
T ss_pred             -----------CCCHHHHHHHHHHHHHHH-HHHHHCCeeeCCCCHHHEEE
Confidence                       588999999999999999 9999864    345777654

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.12  E-value=1.5e-10  Score=91.26  Aligned_cols=87  Identities=16%  Similarity=0.203  Sum_probs=69.8

Q ss_pred             HHHHHHHHHHhhhCCCCCeeEEeceeeecC-------CeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVYRHPKILSVLHPIEECP-------DALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPP   87 (138)
Q Consensus        15 ~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~-------~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~   87 (138)
                      ....++|+.+|++++||||+++++.+.+..       ..+++||||+..+|.+.+....                     
T Consensus        51 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~~l~~~~~~~~---------------------  109 (311)
T cd07866          51 PITALREIKILKKLKHPNVVPLIDMAVERPDKSKRKRGSVYMVTPYMDHDLSGLLENPS---------------------  109 (311)
T ss_pred             chhHHHHHHHHHhcCCCCccchhhheecccccccccCceEEEEEecCCcCHHHHHhccc---------------------
Confidence            345689999999999999999998765432       3589999999888888776321                     


Q ss_pred             CCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          88 ANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        88 ~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                   ..+++.+++.++.||++|| .|||+..    .+-|++|++
T Consensus       110 -------------~~~~~~~~~~i~~~l~~al-~~lH~~~i~H~dl~p~nil~  148 (311)
T cd07866         110 -------------VKLTESQIKCYMLQLLEGI-NYLHENHILHRDIKAANILI  148 (311)
T ss_pred             -------------cCCCHHHHHHHHHHHHHHH-HHHHhCCeecCCCCHHHEEE
Confidence                         2589999999999999999 9999854    445777765

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.12  E-value=3.4e-10  Score=91.97  Aligned_cols=87  Identities=18%  Similarity=0.198  Sum_probs=71.0

Q ss_pred             HHHHHHHHHHHHhhhC-CCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVY-RHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rL-rHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      ...+.+.+|+.+|.++ +||||+++++.++ +.+.+|+||||+. ++|.+.+....                        
T Consensus        37 ~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~-~~~~~~iv~Ey~~~g~L~~~i~~~~------------------------   91 (320)
T cd05590          37 DDVECTMTEKRILSLARNHPFLTQLYCCFQ-TPDRLFFVMEFVNGGDLMFHIQKSR------------------------   91 (320)
T ss_pred             cHHHHHHHHHHHHHhccCCCchhceeeEEE-cCCEEEEEEcCCCCchHHHHHHHcC------------------------
Confidence            3456677888888876 6999999999776 5779999999995 69998886432                        


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                 .+++.+++.++.||+.|| +|||+..    .+.|++|.+
T Consensus        92 -----------~l~~~~~~~~~~ql~~~L-~~lH~~~ivH~dlkp~NIli  129 (320)
T cd05590          92 -----------RFDEARARFYAAEITSAL-MFLHDKGIIYRDLKLDNVLL  129 (320)
T ss_pred             -----------CCCHHHHHHHHHHHHHHH-HHHHHCCeEeCCCCHHHeEE
Confidence                       588999999999999999 9999765    345777765

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.12  E-value=3.7e-10  Score=87.89  Aligned_cols=88  Identities=15%  Similarity=0.137  Sum_probs=71.9

Q ss_pred             HHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSAS   93 (138)
Q Consensus        15 ~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (138)
                      .+.+.+|+..|++++||||+++++.+. ..+.++++|||+. ++|.+++.....                          
T Consensus        46 ~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~--------------------------   98 (263)
T cd05052          46 VEEFLKEAAVMKEIKHPNLVQLLGVCT-REPPFYIITEFMTYGNLLDYLRECNR--------------------------   98 (263)
T ss_pred             HHHHHHHHHHHHhCCCCChhheEEEEc-CCCCcEEEEEeCCCCcHHHHHHhCCC--------------------------
Confidence            456789999999999999999999665 4678999999995 799999864321                          


Q ss_pred             CCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcceee
Q psy3822          94 RPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAFC  137 (138)
Q Consensus        94 ~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~~  137 (138)
                             ..+++..+..++.||++|| .|||+..    .+.|++|.++
T Consensus        99 -------~~l~~~~~~~~~~ql~~~l-~~lH~~~i~H~dlkp~nil~~  138 (263)
T cd05052          99 -------QEVNAVVLLYMATQISSAM-EYLEKKNFIHRDLAARNCLVG  138 (263)
T ss_pred             -------CCCCHHHHHHHHHHHHHHH-HHHHhCCEeecccCcceEEEc
Confidence                   2578888999999999999 9999754    3458887763

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.12  E-value=2.5e-10  Score=95.59  Aligned_cols=83  Identities=8%  Similarity=0.026  Sum_probs=69.1

Q ss_pred             HHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q psy3822          17 ILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASRPT   96 (138)
Q Consensus        17 ~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   96 (138)
                      ...+|+.+|++|+||||+++++.+.. .+.+++|||++.++|.+.+....                              
T Consensus       132 ~~~~E~~il~~l~h~~iv~~~~~~~~-~~~~~lv~e~~~~~l~~~l~~~~------------------------------  180 (392)
T PHA03207        132 TPGREIDILKTISHRAIINLIHAYRW-KSTVCMVMPKYKCDLFTYVDRSG------------------------------  180 (392)
T ss_pred             cHHHHHHHHHhcCCCCccceeeeEee-CCEEEEEehhcCCCHHHHHHhcC------------------------------
Confidence            45789999999999999999997764 67899999999999998884321                              


Q ss_pred             ccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          97 HAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        97 ~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                           .|++.++..++.||+.|| .|||+..    .+.|++|.+
T Consensus       181 -----~l~~~~~~~i~~ql~~aL-~~LH~~givHrDlkp~Nill  218 (392)
T PHA03207        181 -----PLPLEQAITIQRRLLEAL-AYLHGRGIIHRDVKTENIFL  218 (392)
T ss_pred             -----CCCHHHHHHHHHHHHHHH-HHHHHCCccccCCCHHHEEE
Confidence                 588899999999999999 9999864    334776654

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.11  E-value=4e-10  Score=91.22  Aligned_cols=87  Identities=15%  Similarity=0.147  Sum_probs=70.9

Q ss_pred             HHHHHHHHHHHHhhhC-CCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVY-RHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rL-rHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      ...+.+..|+.+|.++ +||||+++++.++ +.+.+|+||||+. ++|.+.+....                        
T Consensus        37 ~~~~~~~~e~~il~~~~~hp~i~~~~~~~~-~~~~~~lv~E~~~~~~L~~~l~~~~------------------------   91 (321)
T cd05591          37 DDVDCTMTEKRILALAAKHPFLTALHCCFQ-TKDRLFFVMEYVNGGDLMFQIQRSR------------------------   91 (321)
T ss_pred             hHHHHHHHHHHHHHhccCCCCccceeeEEE-cCCeEEEEEeCCCCCcHHHHHHHcC------------------------
Confidence            3446677899999876 7999999999776 4678999999995 69998886432                        


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                 .+++.+++.++.||++|| .|||+..    .+.|++|.+
T Consensus        92 -----------~~~~~~~~~~~~qi~~aL-~~LH~~~ivHrDikp~Nill  129 (321)
T cd05591          92 -----------KFDEPRSRFYAAEVTLAL-MFLHRHGVIYRDLKLDNILL  129 (321)
T ss_pred             -----------CCCHHHHHHHHHHHHHHH-HHHHHCCeeccCCCHHHeEE
Confidence                       578899999999999999 9999864    445777765

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.11  E-value=6.9e-10  Score=85.86  Aligned_cols=86  Identities=15%  Similarity=0.119  Sum_probs=70.2

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      ...+.+.+|+++|+++.||||+++++..+  .+..++||||+. ++|.+++....                         
T Consensus        38 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~--~~~~~~v~e~~~~~~L~~~l~~~~-------------------------   90 (257)
T cd05060          38 AGKKEFLREASVMAQLDHPCIVRLIGVCK--GEPLMLVMELAPLGPLLKYLKKRR-------------------------   90 (257)
T ss_pred             HHHHHHHHHHHHHHhcCCCCeeeEEEEEc--CCceEEEEEeCCCCcHHHHHHhCC-------------------------
Confidence            34567899999999999999999999554  456899999995 69999997432                         


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                .+++.++..++.|++.|| +|||+..    .+-|+++.+
T Consensus        91 ----------~~~~~~~~~~~~qi~~~l-~~lh~~~i~H~di~p~nili  128 (257)
T cd05060          91 ----------EIPVSDLKELAHQVAMGM-AYLESKHFVHRDLAARNVLL  128 (257)
T ss_pred             ----------CCCHHHHHHHHHHHHHHH-HHHhhcCeeccCcccceEEE
Confidence                      478889999999999999 9999754    334777654

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.11  E-value=3e-10  Score=92.97  Aligned_cols=89  Identities=15%  Similarity=0.162  Sum_probs=71.0

Q ss_pred             cchHHHHHHHHHHHHhhhCCCCCeeEEeceeeec-----CCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCC
Q psy3822          10 RKETVTEILRLGVKQLEVYRHPKILSVLHPIEEC-----PDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSS   84 (138)
Q Consensus        10 ~~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~-----~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~   84 (138)
                      ..+...+.+.+|+.+|+.++||||+++++.+...     ...+++||||+.++|.+.+..                    
T Consensus        55 ~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~--------------------  114 (355)
T cd07874          55 QNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIQM--------------------  114 (355)
T ss_pred             cChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccccceeEEEhhhhcccHHHHHhh--------------------
Confidence            3445567788999999999999999999976532     236899999999888877751                    


Q ss_pred             CCCCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          85 PPPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                       .+++.+++.++.||++|| +|||+..    .+.|++|.+
T Consensus       115 -----------------~l~~~~~~~~~~qi~~aL-~~LH~~givHrDikp~Nill  152 (355)
T cd07874         115 -----------------ELDHERMSYLLYQMLCGI-KHLHSAGIIHRDLKPSNIVV  152 (355)
T ss_pred             -----------------cCCHHHHHHHHHHHHHHH-HHHHhCCcccCCCChHHEEE
Confidence                             477889999999999999 9999864    445777764

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.11  E-value=1e-09  Score=86.07  Aligned_cols=105  Identities=12%  Similarity=0.165  Sum_probs=75.8

Q ss_pred             chHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          11 KETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPAN   89 (138)
Q Consensus        11 ~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (138)
                      .....+.+++|+.++.+++||||+++++.++ +.+.+++++||+. ++|.+++.......  ..     +          
T Consensus        48 ~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~-~~~~~~~~~e~~~~~~l~~~l~~~~~~~--~~-----~----------  109 (283)
T cd05091          48 EGPLREEFKHEAMMRSRLQHPNIVCLLGVVT-KEQPLSMIFSYCSHSDLHEFLVMRSPHS--DV-----G----------  109 (283)
T ss_pred             CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCCceEEEEEcCCCCcHHHHHHhcCCCc--cc-----c----------
Confidence            3456678899999999999999999999665 4678999999995 69999996432110  00     0          


Q ss_pred             CCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          90 QSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        90 ~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                        ...........+++.++..++.|+++|| +|||+..    .+.|+++.+
T Consensus       110 --~~~~~~~~~~~~~~~~~~~~~~ql~~aL-~~lH~~gi~H~dlkp~Nil~  157 (283)
T cd05091         110 --STDDDKTVKSTLEPADFVHIVTQIAAGM-EFLSSHHVVHKDLATRNVLV  157 (283)
T ss_pred             --ccccccccccccCHHHHHHHHHHHHHHH-HHHHHcCccccccchhheEe
Confidence              0000011123588889999999999999 9999754    345888765

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.11  E-value=8.6e-10  Score=86.62  Aligned_cols=86  Identities=13%  Similarity=0.061  Sum_probs=71.2

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      ...+.+++|+..|.+++||||+++++.+.+ .+.+++||||+. ++|.+++...                          
T Consensus        44 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~~~~~~l~~~i~~~--------------------------   96 (277)
T cd06641          44 DEIEDIQQEITVLSQCDSPYVTKYYGSYLK-DTKLWIIMEYLGGGSALDLLEPG--------------------------   96 (277)
T ss_pred             HHHHHHHHHHHHHHhcCCCCEeEEEEEEEe-CCeEEEEEEeCCCCcHHHHHhcC--------------------------
Confidence            345678999999999999999999998875 678999999996 6898888521                          


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                .+++.++..++.||+.|| .|||+..    .+-|++|++
T Consensus        97 ----------~~~~~~~~~~~~~l~~~l-~~lh~~~i~h~dl~p~Ni~i  134 (277)
T cd06641          97 ----------PLDETQIATILREILKGL-DYLHSEKKIHRDIKAANVLL  134 (277)
T ss_pred             ----------CCCHHHHHHHHHHHHHHH-HHHccCCeecCCCCHHhEEE
Confidence                      477889999999999999 9999854    344777654

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.11  E-value=4.9e-10  Score=90.74  Aligned_cols=86  Identities=16%  Similarity=0.142  Sum_probs=70.5

Q ss_pred             HHHHHHHHHHHhhhC-CCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVY-RHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        14 ~~e~lrrEi~~L~rL-rHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      ..+.+.+|+.+|+++ +||||+++++.++ +.+.+++||||+. ++|.+.+....                         
T Consensus        38 ~~~~~~~e~~il~~~~~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~-------------------------   91 (318)
T cd05570          38 DVECTMTEKRVLALAGKHPFLTQLHSCFQ-TKDRLFFVMEYVNGGDLMFHIQRSG-------------------------   91 (318)
T ss_pred             HHHHHHHHHHHHHhccCCCCccceeeEEE-cCCEEEEEEcCCCCCCHHHHHHHcC-------------------------
Confidence            456678899999988 6999999999776 5779999999995 69988886432                         


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                .+++.+++.++.||++|| .|||+..    .+.|+++.+
T Consensus        92 ----------~l~~~~~~~~~~qi~~~l-~~LH~~~ivH~dlkp~Nill  129 (318)
T cd05570          92 ----------RFDEPRARFYAAEIVLGL-QFLHERGIIYRDLKLDNVLL  129 (318)
T ss_pred             ----------CCCHHHHHHHHHHHHHHH-HHHHhCCeEccCCCHHHeEE
Confidence                      588999999999999999 9999754    334776654

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.10  E-value=3.7e-10  Score=107.26  Aligned_cols=95  Identities=14%  Similarity=0.049  Sum_probs=75.9

Q ss_pred             chHHHHHHHHHHHHhhhCCCCCeeEEeceeee-cCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          11 KETVTEILRLGVKQLEVYRHPKILSVLHPIEE-CPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPA   88 (138)
Q Consensus        11 ~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee-~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (138)
                      .+...+.+.+|+.+|++|+|||||++++.+.+ ....+||||||+. ++|.++|......                    
T Consensus        52 ~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~lyIVMEY~~gGSL~~lL~k~~~~--------------------  111 (1021)
T PTZ00266         52 KEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLYILMEFCDAGDLSRNIQKCYKM--------------------  111 (1021)
T ss_pred             CHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEEEEEeCCCCCcHHHHHHHHhhc--------------------
Confidence            34456788999999999999999999997754 3468999999996 6999999753210                    


Q ss_pred             CCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC-----------CcccCcceee
Q psy3822          89 NQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS-----------TYLPSSVAFC  137 (138)
Q Consensus        89 ~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a-----------~~~~~~~~~~  137 (138)
                                 ...|++..++.++.||+.|| .|||+..           .+.|++|+++
T Consensus       112 -----------~g~L~E~~Il~Ia~QIL~AL-aYLHs~g~~~~~k~IVHRDLKPeNILL~  159 (1021)
T PTZ00266        112 -----------FGKIEEHAIVDITRQLLHAL-AYCHNLKDGPNGERVLHRDLKPQNIFLS  159 (1021)
T ss_pred             -----------cCCCCHHHHHHHHHHHHHHH-HHHHhcccccccCCceeccCcHHHeEee
Confidence                       12589999999999999999 9999743           3448888764

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.10  E-value=6.1e-10  Score=87.45  Aligned_cols=88  Identities=17%  Similarity=0.072  Sum_probs=71.5

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ..+.+.+|+.+|.+++||||+.+++.++ ..+.+|+||||+. ++|.+.+.....                         
T Consensus        36 ~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~-------------------------   89 (277)
T cd05577          36 GEQMALNEKKILEKVSSRFIVSLAYAFE-TKDDLCLVMTLMNGGDLKYHIYNVGE-------------------------   89 (277)
T ss_pred             hhHHHHHHHHHHHhCCCCCEeeeeeEEe-cCCeEEEEEecCCCCcHHHHHHHcCc-------------------------
Confidence            3455678999999999999999999776 4678999999996 699999875331                         


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                              ..+++.++..++.||++|| .|||+..    .+-|++|.+
T Consensus        90 --------~~~~~~~~~~~~~ql~~~l-~~lH~~~i~H~di~p~Nil~  128 (277)
T cd05577          90 --------PGFPEARAIFYAAQIICGL-EHLHQRRIVYRDLKPENVLL  128 (277)
T ss_pred             --------CCCCHHHHHHHHHHHHHHH-HHHHhCCcccCCCCHHHEEE
Confidence                    1588999999999999999 9999864    233666655

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.10  E-value=6.2e-10  Score=85.89  Aligned_cols=88  Identities=16%  Similarity=0.118  Sum_probs=73.6

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ..+.+.+|+.+|.+++||||+++++.+++ .+..++||||+. ++|.+++.....                         
T Consensus        43 ~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~~v~e~~~~~~L~~~~~~~~~-------------------------   96 (256)
T cd05039          43 AAQAFLAEASVMTTLRHPNLVQLLGVVLQ-GNPLYIVTEYMAKGSLVDYLRSRGR-------------------------   96 (256)
T ss_pred             HHHHHHHHHHHHHhcCCcceeeeEEEEcC-CCCeEEEEEecCCCcHHHHHHhcCC-------------------------
Confidence            45778999999999999999999997664 678999999996 699999975431                         


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                              ..+++..++.++.|++.|| .|||+..    .+-|+++.+
T Consensus        97 --------~~~~~~~~~~~~~qi~~~l-~~lh~~~i~H~di~p~Nili  135 (256)
T cd05039          97 --------AVITLAQQLGFALDVCEGM-EYLEEKNFVHRDLAARNVLV  135 (256)
T ss_pred             --------CCCCHHHHHHHHHHHHHHH-HHHHhCCccchhcccceEEE
Confidence                    1478899999999999999 9999865    345888775

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.10  E-value=5.3e-10  Score=95.19  Aligned_cols=54  Identities=17%  Similarity=0.231  Sum_probs=45.5

Q ss_pred             chHHHHHHHHHHHHhhhCC-CCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhc
Q psy3822          11 KETVTEILRLGVKQLEVYR-HPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQ   65 (138)
Q Consensus        11 ~e~~~e~lrrEi~~L~rLr-HPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~   65 (138)
                      .....+.+.+|+.+|++|. ||||+++++.+.+ .+.+++||||+. ++|.++|...
T Consensus        80 ~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~-~~~~~lv~Ey~~~g~L~~~l~~~  135 (400)
T cd05105          80 RSSEKQALMSELKIMTHLGPHLNIVNLLGACTK-SGPIYIITEYCFYGDLVNYLHKN  135 (400)
T ss_pred             ChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEcc-CCceEEEEEecCCCcHHHHHHHh
Confidence            3444577899999999996 9999999997764 678999999995 7999999753

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.10  E-value=6.5e-10  Score=85.99  Aligned_cols=87  Identities=15%  Similarity=0.137  Sum_probs=70.9

Q ss_pred             HHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSAS   93 (138)
Q Consensus        15 ~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (138)
                      .+.+.+|+.+|++++||||+++++.+. +.+.++++|||+. ++|.+++.....                          
T Consensus        45 ~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~--------------------------   97 (261)
T cd05072          45 VQAFLEEANLMKTLQHDKLVRLYAVVT-KEEPIYIITEYMAKGSLLDFLKSDEG--------------------------   97 (261)
T ss_pred             HHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCCcEEEEecCCCCcHHHHHHHhcC--------------------------
Confidence            467899999999999999999998665 4678999999995 799999974321                          


Q ss_pred             CCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          94 RPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        94 ~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                             ..+++..+..++.||++|| +|||+..    .+-|+++.+
T Consensus        98 -------~~~~~~~~~~~~~~l~~~l-~~LH~~~i~H~dl~p~nili  136 (261)
T cd05072          98 -------GKVLLPKLIDFSAQIAEGM-AYIERKNYIHRDLRAANVLV  136 (261)
T ss_pred             -------CCCCHHHHHHHHHHHHHHH-HHHHHCCeeccccchhhEEe
Confidence                   1467788899999999999 9999854    334777654

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.10  E-value=6.9e-10  Score=86.61  Aligned_cols=86  Identities=12%  Similarity=0.063  Sum_probs=66.9

Q ss_pred             HHHHHHH-hhhCCCCCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q psy3822          18 LRLGVKQ-LEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASRPT   96 (138)
Q Consensus        18 lrrEi~~-L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   96 (138)
                      +.+|+.. ++.+.||||+++++.+++ .+.+|++|||+.++|.+++......                            
T Consensus        46 ~~~e~~~~~~~~~~~~iv~~~~~~~~-~~~~~lv~e~~~~~l~~~l~~~~~~----------------------------   96 (283)
T cd06617          46 LLMDLDISMRSVDCPYTVTFYGALFR-EGDVWICMEVMDTSLDKFYKKVYDK----------------------------   96 (283)
T ss_pred             HHHHHHHHHHHcCCCCeeeeeEEEec-CCcEEEEhhhhcccHHHHHHHhccC----------------------------
Confidence            3445554 566789999999998764 6689999999999999998753211                            


Q ss_pred             ccccCCccHHHHHHHHHHHHHHHHhhhcCCCC-----cccCccee
Q psy3822          97 HAREYHFLDIEIKYGVAQVDSSEFTYLYVPST-----YLPSSVAF  136 (138)
Q Consensus        97 ~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a~-----~~~~~~~~  136 (138)
                         ...++|..+..++.||+.|| +|||++.+     +-|+++.+
T Consensus        97 ---~~~~~~~~~~~~~~qi~~~l-~~lH~~~~i~h~dlkp~nil~  137 (283)
T cd06617          97 ---GLTIPEDILGKIAVSIVKAL-EYLHSKLSVIHRDVKPSNVLI  137 (283)
T ss_pred             ---CCCCCHHHHHHHHHHHHHHH-HHHhhcCCeecCCCCHHHEEE
Confidence               12689999999999999999 99998743     34777665

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.10  E-value=7.5e-10  Score=84.54  Aligned_cols=93  Identities=16%  Similarity=0.083  Sum_probs=72.4

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeee-cCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEE-CPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPAN   89 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee-~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (138)
                      +...+.+.+|++.|++++||||+++++.+.+ ....++++|||+. ++|.+++......                     
T Consensus        40 ~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~---------------------   98 (265)
T cd08217          40 EKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKE---------------------   98 (265)
T ss_pred             HHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEehhccCCCHHHHHHHHhhc---------------------
Confidence            4455778999999999999999999986653 3457999999995 6999999753211                     


Q ss_pred             CCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhc-----CCC----CcccCccee
Q psy3822          90 QSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLY-----VPS----TYLPSSVAF  136 (138)
Q Consensus        90 ~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH-----~~a----~~~~~~~~~  136 (138)
                                ...+++.++..++.||++|| .|||     +..    .+-|++|.+
T Consensus        99 ----------~~~l~~~~~~~~~~~i~~~l-~~lH~~~~~~~~i~h~dl~p~nili  143 (265)
T cd08217          99 ----------RKYIEEEFIWRILTQLLLAL-YECHNRSDPGNTVLHRDLKPANIFL  143 (265)
T ss_pred             ----------ccCCCHHHHHHHHHHHHHHH-HHHhcCccccCcceecCCCHHHEEE
Confidence                      12688999999999999999 9999     322    334777655

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.10  E-value=3.2e-10  Score=92.12  Aligned_cols=88  Identities=19%  Similarity=0.265  Sum_probs=70.9

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeec----CCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEEC----PDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPP   87 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~----~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~   87 (138)
                      ....+.+.+|+.+|++++||||+++++.+.+.    ...+++++||+.++|.+++...                      
T Consensus        44 ~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~----------------------  101 (336)
T cd07849          44 QTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDVYIVQELMETDLYKLIKTQ----------------------  101 (336)
T ss_pred             chhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceEEEEehhcccCHHHHHhcC----------------------
Confidence            44556678899999999999999999865432    2368999999998988887521                      


Q ss_pred             CCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          88 ANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        88 ~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                    .+++.+++.++.||++|| +|||+..    .+.|++|.+
T Consensus       102 --------------~l~~~~~~~i~~ql~~aL-~~LH~~~ivH~dlkp~Nill  139 (336)
T cd07849         102 --------------HLSNDHIQYFLYQILRGL-KYIHSANVLHRDLKPSNLLL  139 (336)
T ss_pred             --------------CCCHHHHHHHHHHHHHHH-HHHHhCCeeccCCCHHHEEE
Confidence                          588999999999999999 9999865    344777654

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.10  E-value=6.1e-10  Score=86.35  Aligned_cols=87  Identities=20%  Similarity=0.188  Sum_probs=71.5

Q ss_pred             HHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccc-cccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPV-YASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSAS   93 (138)
Q Consensus        15 ~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V-~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (138)
                      .+.+++|+..|++++||||+++++.+. ..+.++++|||+ .++|.+++....                           
T Consensus        45 ~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~---------------------------   96 (261)
T cd05068          45 PKDFLAEAQIMKKLRHPKLIQLYAVCT-LEEPIYIVTELMKYGSLLEYLQGGA---------------------------   96 (261)
T ss_pred             HHHHHHHHHHHHHCCCCCccceeEEEe-cCCCeeeeeecccCCcHHHHHhccC---------------------------
Confidence            356789999999999999999999665 467899999999 579999987432                           


Q ss_pred             CCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          94 RPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        94 ~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                            +..+++.++..++.|+++|| .|||+..    .+.|+++.+
T Consensus        97 ------~~~~~~~~~~~~~~~i~~~l-~~lH~~~i~H~dl~p~Nil~  136 (261)
T cd05068          97 ------GRALKLPQLIDMAAQVASGM-AYLEAQNYIHRDLAARNVLV  136 (261)
T ss_pred             ------CCCCCHHHHHHHHHHHHHHH-HHHHhCCeeeccCCcceEEE
Confidence                  12578889999999999999 9999864    345888765

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.10  E-value=9e-10  Score=88.30  Aligned_cols=104  Identities=16%  Similarity=0.123  Sum_probs=75.5

Q ss_pred             hHHHHHHHHHHHHhhhC-CCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVY-RHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPAN   89 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rL-rHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (138)
                      +...+.+++|+.+|.++ +||||+++++.++ +.+.+|+||||+. ++|.+++.......             ..+....
T Consensus        48 ~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~-------------~~~~~~~  113 (303)
T cd05088          48 KDDHRDFAGELEVLCKLGHHPNIINLLGACE-HRGYLYLAIEYAPHGNLLDFLRKSRVLE-------------TDPAFAI  113 (303)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCcceEEEEEC-CCCCceEEEEeCCCCcHHHHHHhccccc-------------ccccccc
Confidence            34556788999999999 8999999999776 4678999999995 79999997543210             0000000


Q ss_pred             CCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          90 QSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        90 ~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                            .......+++.++..++.||++|| +|||+..    .+.|++|.+
T Consensus       114 ------~~~~~~~l~~~~~~~~~~qi~~al-~~LH~~gi~H~dlkp~Nili  157 (303)
T cd05088         114 ------ANSTASTLSSQQLLHFAADVARGM-DYLSQKQFIHRDLAARNILV  157 (303)
T ss_pred             ------cccccCcCCHHHHHHHHHHHHHHH-HHHHhCCccccccchheEEe
Confidence                  000112589999999999999999 9999754    344887765

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.10  E-value=1e-09  Score=84.81  Aligned_cols=95  Identities=9%  Similarity=0.048  Sum_probs=73.5

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeecC-----CeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEECP-----DALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSP   85 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~-----~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~   85 (138)
                      ....+.+++|+..|+++.||||+++++...+..     ...+++|||+. ++|..++.......                
T Consensus        42 ~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~----------------  105 (273)
T cd05035          42 YSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGG----------------  105 (273)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCcccEEEEeccCCCCHHHHHHHhhccC----------------
Confidence            445678899999999999999999998654422     24899999995 79999986432110                


Q ss_pred             CCCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          86 PPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        86 ~~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                   ....+++..+..++.||+.|| +|||+..    .+.|++|++
T Consensus       106 -------------~~~~~~~~~~~~~~~~i~~aL-~~lH~~~i~H~dlkp~Nil~  146 (273)
T cd05035         106 -------------LPEKLPLQTLLKFMVDIALGM-EYLSNRNFIHRDLAARNCML  146 (273)
T ss_pred             -------------CcccCCHHHHHHHHHHHHHHH-HHHHhCCeeccccchheEEE
Confidence                         012588899999999999999 9999865    345888775

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.10  E-value=4.3e-10  Score=91.13  Aligned_cols=85  Identities=16%  Similarity=0.134  Sum_probs=67.0

Q ss_pred             HHHHHHHHHHHh---hhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQL---EVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPAN   89 (138)
Q Consensus        14 ~~e~lrrEi~~L---~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (138)
                      ..+.+++|+..+   .+++||||+++++.++ +++.+|+||||+. ++|...+..                         
T Consensus        42 ~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~-~~~~~~lv~E~~~~~~L~~~~~~-------------------------   95 (324)
T cd05589          42 EVESLMCEKRIFETANSERHPFLVNLFACFQ-TEDHVCFVMEYAAGGDLMMHIHT-------------------------   95 (324)
T ss_pred             HHHHHHHHHHHHHhccccCCCChhceeeEEE-cCCEEEEEEcCCCCCcHHHHhhc-------------------------
Confidence            346677776655   5678999999999776 5789999999995 688877652                         


Q ss_pred             CCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          90 QSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        90 ~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                 ..|++.+++.++.||+.|| +|||+..    .+.|+++.+
T Consensus        96 -----------~~l~~~~~~~~~~qi~~al-~~lH~~~ivHrdlkp~Nill  134 (324)
T cd05589          96 -----------DVFSEPRAVFYAACVVLGL-QYLHENKIVYRDLKLDNLLL  134 (324)
T ss_pred             -----------CCCCHHHHHHHHHHHHHHH-HHHHhCCeEecCCCHHHeEE
Confidence                       1588999999999999999 9999864    344776654

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.09  E-value=5e-10  Score=91.76  Aligned_cols=88  Identities=13%  Similarity=0.188  Sum_probs=71.1

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeecC-----CeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEECP-----DALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPP   86 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~-----~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~   86 (138)
                      +...+.+.+|+.+|++++||||+++++.++...     ...++|||++.++|.+++...                     
T Consensus        55 ~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~---------------------  113 (343)
T cd07880          55 ELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFHDFYLVMPFMGTDLGKLMKHE---------------------  113 (343)
T ss_pred             hHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccceEEEEEecCCCCHHHHHhcC---------------------
Confidence            445567889999999999999999999776432     246999999988998887621                     


Q ss_pred             CCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          87 PANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        87 ~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                     .+++..++.++.||++|| +|||+..    .+.|++|++
T Consensus       114 ---------------~l~~~~~~~i~~qi~~al-~~LH~~gi~H~dlkp~Nill  151 (343)
T cd07880         114 ---------------KLSEDRIQFLVYQMLKGL-KYIHAAGIIHRDLKPGNLAV  151 (343)
T ss_pred             ---------------CCCHHHHHHHHHHHHHHH-HHHHhCCeecCCCCHHHEEE
Confidence                           478899999999999999 9999855    445777765

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.09  E-value=9.1e-10  Score=87.24  Aligned_cols=102  Identities=13%  Similarity=0.036  Sum_probs=74.9

Q ss_pred             HHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSAS   93 (138)
Q Consensus        15 ~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (138)
                      .+.+++|+..|++++||||+++++.++ +.+.+++||||+. ++|.+++.......               ....+    
T Consensus        51 ~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~i~~~~~~~---------------~~~~~----  110 (291)
T cd05094          51 RKDFQREAELLTNLQHEHIVKFYGVCG-DGDPLIMVFEYMKHGDLNKFLRAHGPDA---------------MILVD----  110 (291)
T ss_pred             HHHHHHHHHHHhcCCCCCcceEEEEEc-cCCceEEEEecCCCCcHHHHHHhcCccc---------------ccccc----
Confidence            467899999999999999999999766 4678999999995 79999997543100               00000    


Q ss_pred             CCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcceee
Q psy3822          94 RPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAFC  137 (138)
Q Consensus        94 ~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~~  137 (138)
                      ...+.....+++..+..++.||+.|| +|||+..    .+.|++++++
T Consensus       111 ~~~~~~~~~~~~~~~~~i~~~i~~al-~~lH~~~i~H~dlkp~Nil~~  157 (291)
T cd05094         111 GQPRQAKGELGLSQMLHIASQIASGM-VYLASQHFVHRDLATRNCLVG  157 (291)
T ss_pred             cccccCcCCCCHHHHHHHHHHHHHHH-HHHHhCCeeecccCcceEEEc
Confidence            00011112588899999999999999 9999765    4458888764

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.09  E-value=7e-10  Score=90.35  Aligned_cols=87  Identities=11%  Similarity=0.038  Sum_probs=72.3

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ..+.+++|+.+|.+++||||+++++.++ +.+.+++||||+. ++|.+++.+..                          
T Consensus        44 ~~~~~~~e~~~l~~~~~~~i~~~~~~~~-~~~~~~lv~ey~~~g~L~~~l~~~~--------------------------   96 (332)
T cd05623          44 ETACFREERDVLVNGDNQWITTLHYAFQ-DENNLYLVMDYYVGGDLLTLLSKFE--------------------------   96 (332)
T ss_pred             HHHHHHHHHHHHhhCCCCCEeeEEEEEe-cCCEEEEEEeccCCCcHHHHHHHhc--------------------------
Confidence            3456889999999999999999999776 4679999999994 79999997532                          


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                              ..+++..++.++.||+.|| +|||+..    .+.|++|.+
T Consensus        97 --------~~l~~~~~~~~~~qi~~al-~~lH~~~iiHrDlkp~Nili  135 (332)
T cd05623          97 --------DRLPEDMARFYLAEMVIAI-DSVHQLHYVHRDIKPDNILM  135 (332)
T ss_pred             --------CCCCHHHHHHHHHHHHHHH-HHHHHCCeEecCCCHHHEEE
Confidence                    1578889999999999999 9999855    345777765

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>KOG0578|consensus

Probab=99.09  E-value=7.5e-11  Score=105.45  Aligned_cols=74  Identities=18%  Similarity=0.174  Sum_probs=66.9

Q ss_pred             HHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          16 EILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASR   94 (138)
Q Consensus        16 e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (138)
                      +.+-.|+.+|+.++|||||.+++.+-. ++.||.||||+. ++|-+++..                              
T Consensus       315 eLilnEi~Vm~~~~H~NiVnfl~Sylv-~deLWVVMEym~ggsLTDvVt~------------------------------  363 (550)
T KOG0578|consen  315 ELLLNEILVMRDLHHPNIVNFLDSYLV-GDELWVVMEYMEGGSLTDVVTK------------------------------  363 (550)
T ss_pred             hhhHHHHHHHHhccchHHHHHHHHhcc-cceeEEEEeecCCCchhhhhhc------------------------------
Confidence            677899999999999999999999876 478999999995 699999873                              


Q ss_pred             CcccccCCccHHHHHHHHHHHHHHHHhhhcCCC
Q psy3822          95 PTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS  127 (138)
Q Consensus        95 ~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a  127 (138)
                            +.|+|..|+.+..+++.|| +|||+.+
T Consensus       364 ------~~~~E~qIA~Icre~l~aL-~fLH~~g  389 (550)
T KOG0578|consen  364 ------TRMTEGQIAAICREILQGL-KFLHARG  389 (550)
T ss_pred             ------ccccHHHHHHHHHHHHHHH-HHHHhcc
Confidence                  3699999999999999999 9999876

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.09  E-value=8.4e-10  Score=85.16  Aligned_cols=87  Identities=16%  Similarity=0.145  Sum_probs=71.7

Q ss_pred             HHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSAS   93 (138)
Q Consensus        15 ~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (138)
                      .+.+.+|+..|++++||||+++++.++ +.+.++++||++. ++|.+++....                           
T Consensus        45 ~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~~v~e~~~~~~L~~~i~~~~---------------------------   96 (261)
T cd05034          45 PEAFLQEAQIMKKLRHDKLVQLYAVCS-EEEPIYIVTEYMSKGSLLDFLKSGE---------------------------   96 (261)
T ss_pred             HHHHHHHHHHHhhCCCCCEeeeeeeee-cCCceEEEEeccCCCCHHHHHhccc---------------------------
Confidence            356789999999999999999999765 4678999999995 69999997432                           


Q ss_pred             CCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          94 RPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        94 ~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                            ...+++.++..++.||+.|| .|||++.    .+-|++|.+
T Consensus        97 ------~~~~~~~~~~~~~~~i~~al-~~lh~~~i~h~di~p~nili  136 (261)
T cd05034          97 ------GKKLRLPQLVDMAAQIAEGM-AYLESRNYIHRDLAARNILV  136 (261)
T ss_pred             ------cCCCCHHHHHHHHHHHHHHH-HHHHhCCcccCCcchheEEE
Confidence                  12578889999999999999 9999865    234888765

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.09  E-value=7.6e-10  Score=88.22  Aligned_cols=104  Identities=14%  Similarity=0.115  Sum_probs=75.4

Q ss_pred             hHHHHHHHHHHHHhhhC-CCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVY-RHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPAN   89 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rL-rHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (138)
                      ....+.+.+|+..|+++ +||||+++++.+.+ .+.+|++|||+. ++|.+++.......            ...+-.  
T Consensus        61 ~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~------------~~~~~~--  125 (304)
T cd05101          61 EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ-DGPLYVIVEYASKGNLREYLRARRPPG------------MEYSYD--  125 (304)
T ss_pred             hHHHHHHHHHHHHHHhhccCCCchheeEEEec-CCceEEEEecCCCCcHHHHHHhcCCcc------------cccccc--
Confidence            34457789999999999 89999999997764 678999999995 69999998543110            000000  


Q ss_pred             CCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          90 QSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        90 ~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                           -.......++...+..++.||++|| +|||++.    .+.|+++.+
T Consensus       126 -----~~~~~~~~~~~~~~~~~~~qi~~al-~~LH~~givH~dlkp~Nili  170 (304)
T cd05101         126 -----IARVPDEQMTFKDLVSCTYQVARGM-EYLASQKCIHRDLAARNVLV  170 (304)
T ss_pred             -----cccCCcccccHHHHHHHHHHHHHHH-HHHHHCCeeecccccceEEE
Confidence                 0001112578888999999999999 9999875    345888765

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.09  E-value=8.3e-10  Score=86.18  Aligned_cols=86  Identities=15%  Similarity=0.086  Sum_probs=71.2

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      ...+.+.+|++.+++++||||+++++.+.+ ...+|+|+||+. ++|.+++...                          
T Consensus        41 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~~v~e~~~~~~L~~~~~~~--------------------------   93 (274)
T cd06609          41 DEIEDIQQEIQFLSQCRSPYITKYYGSFLK-GSKLWIIMEYCGGGSCLDLLKPG--------------------------   93 (274)
T ss_pred             hHHHHHHHHHHHHHHcCCCCeeeeeEEEEE-CCeEEEEEEeeCCCcHHHHHhhc--------------------------
Confidence            345667899999999999999999998775 578999999995 6999888621                          


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                .+++.+++..+.||+.|| .|||+..    .+-|++|+.
T Consensus        94 ----------~~~~~~~~~~~~ql~~~l-~~lh~~~i~h~dl~p~ni~i  131 (274)
T cd06609          94 ----------KLDETYIAFILREVLLGL-EYLHEEGKIHRDIKAANILL  131 (274)
T ss_pred             ----------CCCHHHHHHHHHHHHHHH-HHHHhCCcccCCCCHHHEEE
Confidence                      578899999999999999 9999864    334666654

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.08  E-value=1.1e-09  Score=86.08  Aligned_cols=88  Identities=17%  Similarity=0.186  Sum_probs=73.7

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ..+.+.+|+..|++++||||+++++.+.+ .+.++++|||+. ++|.+++....                          
T Consensus        58 ~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~--------------------------  110 (286)
T cd06614          58 NKELIINEILIMKDCKHPNIVDYYDSYLV-GDELWVVMEYMDGGSLTDIITQNF--------------------------  110 (286)
T ss_pred             hHHHHHHHHHHHHHCCCCCeeEEEEEEEE-CCEEEEEEeccCCCcHHHHHHHhc--------------------------
Confidence            35678899999999999999999998775 578999999997 79999998532                          


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcceee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAFC  137 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~~  137 (138)
                              ..+++.++..++.||++|| .|||+..    .+-|++|++.
T Consensus       111 --------~~l~~~~~~~i~~~i~~~L-~~lH~~gi~H~dl~p~ni~i~  150 (286)
T cd06614         111 --------VRMNEPQIAYVCREVLQGL-EYLHSQNVIHRDIKSDNILLS  150 (286)
T ss_pred             --------cCCCHHHHHHHHHHHHHHH-HHHHhCCeeeCCCChhhEEEc
Confidence                    1578889999999999999 9999854    3458887653

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.08  E-value=3.6e-10  Score=93.39  Aligned_cols=83  Identities=10%  Similarity=0.032  Sum_probs=69.5

Q ss_pred             HHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcc
Q psy3822          18 LRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASRPTH   97 (138)
Q Consensus        18 lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   97 (138)
                      ..+|+.+|++|+||||+++++.+.+ .+..++|||++.++|.+++....                               
T Consensus       104 ~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~~~~~l~~~l~~~~-------------------------------  151 (357)
T PHA03209        104 TLIEAMLLQNVNHPSVIRMKDTLVS-GAITCMVLPHYSSDLYTYLTKRS-------------------------------  151 (357)
T ss_pred             cHHHHHHHHhCCCCCCcChhheEEe-CCeeEEEEEccCCcHHHHHHhcc-------------------------------
Confidence            3579999999999999999997775 67899999999999999887432                               


Q ss_pred             cccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          98 AREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        98 ~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                         ..+++.++..++.||+.|| .|||+..    .+.|++|.+
T Consensus       152 ---~~~~~~~~~~i~~qi~~aL-~~LH~~~ivHrDlkp~Nill  190 (357)
T PHA03209        152 ---RPLPIDQALIIEKQILEGL-RYLHAQRIIHRDVKTENIFI  190 (357)
T ss_pred             ---CCCCHHHHHHHHHHHHHHH-HHHHHCCeecCCCCHHHEEE
Confidence               2588899999999999999 9999864    345777654

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.08  E-value=5.5e-10  Score=91.84  Aligned_cols=87  Identities=14%  Similarity=0.146  Sum_probs=69.4

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeec-----CCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEEC-----PDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPP   86 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~-----~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~   86 (138)
                      +...+.+.+|+.+|++++||||+++++.+...     ...+|+||||+.++|.+.+..                      
T Consensus        64 ~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~----------------------  121 (364)
T cd07875          64 QTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM----------------------  121 (364)
T ss_pred             chhHHHHHHHHHHHHhcCCCCccccceeecccccccccCeEEEEEeCCCCCHHHHHHh----------------------
Confidence            44556778999999999999999999865421     236899999999888887751                      


Q ss_pred             CCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          87 PANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        87 ~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                     .+++.+++.++.||++|| +|||+..    .+.|++|.+
T Consensus       122 ---------------~~~~~~~~~~~~qi~~aL-~~LH~~~ivH~Dlkp~NIll  159 (364)
T cd07875         122 ---------------ELDHERMSYLLYQMLCGI-KHLHSAGIIHRDLKPSNIVV  159 (364)
T ss_pred             ---------------cCCHHHHHHHHHHHHHHH-HHHhhCCeecCCCCHHHEEE
Confidence                           367788999999999999 9999854    445777654

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.08  E-value=7.7e-10  Score=88.08  Aligned_cols=104  Identities=16%  Similarity=0.129  Sum_probs=75.3

Q ss_pred             hHHHHHHHHHHHHhhhC-CCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVY-RHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPAN   89 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rL-rHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (138)
                      ....+.+.+|+.++.++ +||||+++++.+++ .+.+++||||+. ++|.+++........            ..+...+
T Consensus        43 ~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~------------~~~~~~~  109 (297)
T cd05089          43 ENDHRDFAGELEVLCKLGHHPNIINLLGACEN-RGYLYIAIEYAPYGNLLDFLRKSRVLET------------DPAFAKE  109 (297)
T ss_pred             HHHHHHHHHHHHHHHhhcCCCchhheEEEEcc-CCcceEEEEecCCCcHHHHHHhcccccc------------ccccccc
Confidence            34457789999999999 79999999997764 668999999995 799999975332100            0000000


Q ss_pred             CCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          90 QSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        90 ~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                             ......+++..+..++.||+.|| +|||+..    .+.|++|.+
T Consensus       110 -------~~~~~~l~~~~~~~i~~qi~~al-~~lH~~~ivH~dlkp~Nill  152 (297)
T cd05089         110 -------HGTASTLTSQQLLQFASDVATGM-QYLSEKQFIHRDLAARNVLV  152 (297)
T ss_pred             -------cCccCCCCHHHHHHHHHHHHHHH-HHHHHCCcccCcCCcceEEE
Confidence                   00112588999999999999999 9999854    345888876

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.08  E-value=9.9e-10  Score=86.59  Aligned_cols=103  Identities=14%  Similarity=0.050  Sum_probs=75.3

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      +...+.+++|+..|++++||||+++++.+. ..+..+++|||+. ++|.+++..........              .   
T Consensus        48 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~--------------~---  109 (280)
T cd05092          48 ESARQDFQREAELLTVLQHQHIVRFYGVCT-EGRPLLMVFEYMRHGDLNRFLRSHGPDAKIL--------------A---  109 (280)
T ss_pred             HHHHHHHHHHHHHHhcCCCCCCceEEEEEe-cCCceEEEEecCCCCCHHHHHHhcCcchhhh--------------c---
Confidence            445678899999999999999999999766 4678999999995 79999997543100000              0   


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                         .........+++..+..++.||++|| +|||+..    .+-|++|++
T Consensus       110 ---~~~~~~~~~l~~~~~~~~~~qi~~al-~~LH~~~i~H~dlkp~nil~  155 (280)
T cd05092         110 ---GGEDVAPGQLTLGQMLAIASQIASGM-VYLASLHFVHRDLATRNCLV  155 (280)
T ss_pred             ---ccccCCccccCHHHHHHHHHHHHHHH-HHHHHCCeecccccHhhEEE
Confidence               00000112588899999999999999 9999754    445888765

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.08  E-value=6.1e-10  Score=87.32  Aligned_cols=87  Identities=16%  Similarity=0.107  Sum_probs=67.9

Q ss_pred             HHHHHHHHHhhhC---CCCCeeEEeceeeec----CCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          16 EILRLGVKQLEVY---RHPKILSVLHPIEEC----PDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPA   88 (138)
Q Consensus        16 e~lrrEi~~L~rL---rHPnIL~l~e~~ee~----~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (138)
                      ....+|+..+++|   +||||+++++.+.+.    ...++++||++.++|.+++.....                     
T Consensus        44 ~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~---------------------  102 (288)
T cd07863          44 LSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETKVTLVFEHVDQDLRTYLDKVPP---------------------  102 (288)
T ss_pred             hHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCceEEEEEcccccCHHHHHHhcCC---------------------
Confidence            3456788877776   699999999976532    246999999999999998874321                     


Q ss_pred             CCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          89 NQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        89 ~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                  ..+++.+++.++.||+.|| .|||+..    .+.|++|.+
T Consensus       103 ------------~~~~~~~~~~~~~qi~~al-~~lH~~~ivH~dikp~Nili  141 (288)
T cd07863         103 ------------PGLPAETIKDLMRQFLRGL-DFLHANCIVHRDLKPENILV  141 (288)
T ss_pred             ------------CCCCHHHHHHHHHHHHHHH-HHHHhCCeecCCCCHHHEEE
Confidence                        1488999999999999999 9999764    345777765

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.07  E-value=6.1e-10  Score=90.10  Aligned_cols=82  Identities=11%  Similarity=0.111  Sum_probs=68.9

Q ss_pred             HHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q psy3822          17 ILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASRPT   96 (138)
Q Consensus        17 ~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   96 (138)
                      .+.+|+..|.+|+||||+++++.+. +.+.+++||||+.++|.+++....                              
T Consensus        66 ~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~~~l~~~l~~~~------------------------------  114 (335)
T PTZ00024         66 TTLRELKIMNEIKHENIMGLVDVYV-EGDFINLVMDIMASDLKKVVDRKI------------------------------  114 (335)
T ss_pred             hHHHHHHHHHhCCCcceeeeeEEEe-cCCcEEEEEeccccCHHHHHHhcC------------------------------
Confidence            4679999999999999999999776 467999999999999999986322                              


Q ss_pred             ccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcce
Q psy3822          97 HAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVA  135 (138)
Q Consensus        97 ~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~  135 (138)
                           .+++..+..++.||++|| +|||+..    .+-|++|+
T Consensus       115 -----~~~~~~~~~~~~ql~~aL-~~LH~~~i~H~dl~~~nil  151 (335)
T PTZ00024        115 -----RLTESQVKCILLQILNGL-NVLHKWYFMHRDLSPANIF  151 (335)
T ss_pred             -----CCCHHHHHHHHHHHHHHH-HHHHhCCeecccccHHHeE
Confidence                 578889999999999999 9999754    33466654

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.07  E-value=4.4e-10  Score=91.55  Aligned_cols=86  Identities=14%  Similarity=0.161  Sum_probs=70.2

Q ss_pred             HHHHHHHHHHhhhCCCCCeeEEeceeeecC----CeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVYRHPKILSVLHPIEECP----DALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        15 ~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~----~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      ...+.+|+.+|++++||||+++++.+....    ..+|+||||+.++|.+++....                        
T Consensus        48 ~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~------------------------  103 (337)
T cd07858          48 AKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDVYIVYELMDTDLHQIIRSSQ------------------------  103 (337)
T ss_pred             hHHHHHHHHHHHhcCCCCccchHHheecccccccCcEEEEEeCCCCCHHHHHhcCC------------------------
Confidence            355678999999999999999998765432    3589999999989988886321                        


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                 .+++.+++.++.||++|| .|||+..    .+.|++|++
T Consensus       104 -----------~l~~~~~~~i~~qi~~aL-~~LH~~~i~H~dlkp~Nil~  141 (337)
T cd07858         104 -----------TLSDDHCQYFLYQLLRGL-KYIHSANVLHRDLKPSNLLL  141 (337)
T ss_pred             -----------CCCHHHHHHHHHHHHHHH-HHHHhCCEecCCCCHHHEEE
Confidence                       588999999999999999 9999865    345777765

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.07  E-value=1e-09  Score=87.27  Aligned_cols=87  Identities=14%  Similarity=0.069  Sum_probs=70.8

Q ss_pred             HHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSAS   93 (138)
Q Consensus        15 ~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (138)
                      .+.+.+|+.+|++|+||||+.+++.+++ ++.+++||||+. ++|.+.+.....                          
T Consensus        44 ~~~~~~E~~il~~l~~~~i~~~~~~~~~-~~~~~lv~e~~~g~~L~~~l~~~~~--------------------------   96 (285)
T cd05630          44 ESMALNEKQILEKVNSRFVVSLAYAYET-KDALCLVLTLMNGGDLKFHIYHMGE--------------------------   96 (285)
T ss_pred             HHHHHHHHHHHHhCCCCCeeeeeEEEec-CCEEEEEEEecCCCcHHHHHHHhcc--------------------------
Confidence            3556789999999999999999997764 678999999995 699998864321                          


Q ss_pred             CCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          94 RPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        94 ~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                             ..+++.++..++.|++.|| .|||+..    .+.|+++++
T Consensus        97 -------~~l~~~~~~~~~~qi~~~l-~~lH~~~iiH~dikp~Nil~  135 (285)
T cd05630          97 -------AGFEEGRAVFYAAEICCGL-EDLHQERIVYRDLKPENILL  135 (285)
T ss_pred             -------cCCCHHHHHHHHHHHHHHH-HHHHhCCEEeCCCCHHHEEE
Confidence                   2588899999999999999 9999754    344777654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.07  E-value=9.6e-10  Score=84.61  Aligned_cols=90  Identities=16%  Similarity=0.136  Sum_probs=71.3

Q ss_pred             HHHHHHHHHHhhhC-CCCCeeEEeceeeec-----CCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVY-RHPKILSVLHPIEEC-----PDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPP   87 (138)
Q Consensus        15 ~e~lrrEi~~L~rL-rHPnIL~l~e~~ee~-----~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~   87 (138)
                      .+.+++|+.+++++ .||||+++++.+.+.     .+.+++||||+. ++|.+++......                   
T Consensus        46 ~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~-------------------  106 (275)
T cd06608          46 EEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKK-------------------  106 (275)
T ss_pred             HHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEEEEEEEcCCCCcHHHHHHHHhhc-------------------
Confidence            46789999999999 699999999977642     236999999996 5999998743210                   


Q ss_pred             CCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          88 ANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        88 ~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                  ...+++.+++.++.||++|| .|||+..    .+-|++|.+
T Consensus       107 ------------~~~~~~~~~~~~~~ql~~al-~~lH~~~i~H~~l~p~ni~~  146 (275)
T cd06608         107 ------------GKRLKEEWIAYILRETLRGL-AYLHENKVIHRDIKGQNILL  146 (275)
T ss_pred             ------------CCCCCHHHHHHHHHHHHHHH-HHHhcCCcccCCCCHHHEEE
Confidence                        12688999999999999999 9999754    334777765

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.07  E-value=7.1e-10  Score=90.87  Aligned_cols=88  Identities=14%  Similarity=0.145  Sum_probs=70.1

Q ss_pred             chHHHHHHHHHHHHhhhCCCCCeeEEeceeeec-----CCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCC
Q psy3822          11 KETVTEILRLGVKQLEVYRHPKILSVLHPIEEC-----PDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSP   85 (138)
Q Consensus        11 ~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~-----~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~   85 (138)
                      .....+.+.+|+.+|++++||||+++++.+...     ...+|+||||+.++|.+.+..                     
T Consensus        55 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~---------------------  113 (353)
T cd07850          55 NVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIQM---------------------  113 (353)
T ss_pred             ChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccCcEEEEEeccCCCHHHHHhh---------------------
Confidence            344556778999999999999999999876532     235899999999899888752                     


Q ss_pred             CCCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          86 PPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        86 ~~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                      .+++.+++.++.||+.|| +|||+..    .+.|++|.+
T Consensus       114 ----------------~l~~~~~~~~~~ql~~aL-~~LH~~gi~H~dlkp~Nil~  151 (353)
T cd07850         114 ----------------DLDHERMSYLLYQMLCGI-KHLHSAGIIHRDLKPSNIVV  151 (353)
T ss_pred             ----------------cCCHHHHHHHHHHHHHHH-HHHHhCCeeeCCCCHHHEEE
Confidence                            377889999999999999 9999864    344777654

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.07  E-value=8.9e-10  Score=85.01  Aligned_cols=89  Identities=17%  Similarity=0.150  Sum_probs=72.6

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      +...+.+.+|++.|++++||||+++++.+.. .+.++++|||+. .+|.+++....                        
T Consensus        40 ~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~------------------------   94 (265)
T cd06605          40 EAIQKQILRELDILHKCNSPYIVGFYGAFYN-NGDISICMEYMDGGSLDKILKEVQ------------------------   94 (265)
T ss_pred             hHHHHHHHHHHHHHHHCCCCchhhhheeeec-CCEEEEEEEecCCCcHHHHHHHcc------------------------
Confidence            3455677899999999999999999997764 679999999997 79999997432                        


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCCCcc-----cCccee
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPSTYL-----PSSVAF  136 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a~~~-----~~~~~~  136 (138)
                                ..+++..++.++.||++|| .|||+..+++     |++|++
T Consensus        95 ----------~~~~~~~~~~~~~~l~~~l-~~lH~~~~i~H~dl~~~ni~~  134 (265)
T cd06605          95 ----------GRIPERILGKIAVAVLKGL-TYLHEKHKIIHRDVKPSNILV  134 (265)
T ss_pred             ----------CCCCHHHHHHHHHHHHHHH-HHHcCCCCeecCCCCHHHEEE
Confidence                      1578899999999999999 9999944443     666543

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.07  E-value=8.7e-10  Score=85.35  Aligned_cols=90  Identities=12%  Similarity=0.099  Sum_probs=72.9

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ..+.+.+|+..|++++||||+++++.+.+ .+.++++|||+. ++|.+++......                        
T Consensus        45 ~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~~~v~e~~~~~~L~~~~~~~~~~------------------------   99 (267)
T cd08229          45 ARADCIKEIDLLKQLNHPNVIKYYASFIE-DNELNIVLELADAGDLSRMIKHFKKQ------------------------   99 (267)
T ss_pred             HHHHHHHHHHHHHHccCCchhhhhheeEe-CCeEEEEEEecCCCCHHHHHHHhhcc------------------------
Confidence            44677899999999999999999998775 678999999996 6999998743211                        


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                             ...+++..+..++.||++|| .|||+..    .+-|++|++
T Consensus       100 -------~~~~~~~~~~~~~~~i~~~l-~~LH~~~i~H~dl~p~nili  139 (267)
T cd08229         100 -------KRLIPEKTVWKYFVQLCSAL-EHMHSRRVMHRDIKPANVFI  139 (267)
T ss_pred             -------CCCCCHHHHHHHHHHHHHHH-HHHHHCCeecCCCCHHHEEE
Confidence                   12588999999999999999 9999754    345777665

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.07  E-value=9.2e-10  Score=85.32  Aligned_cols=85  Identities=18%  Similarity=0.162  Sum_probs=69.9

Q ss_pred             HHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          16 EILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASR   94 (138)
Q Consensus        16 e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (138)
                      +.+++|+.+|++|+||||++++..+.+  +..+++|||+. ++|.+++....                            
T Consensus        46 ~~~~~E~~~l~~l~~~~i~~~~~~~~~--~~~~lv~e~~~~~~L~~~~~~~~----------------------------   95 (260)
T cd05070          46 ESFLEEAQIMKKLRHDKLVQLYAVVSE--EPIYIVTEYMSKGSLLDFLKDGE----------------------------   95 (260)
T ss_pred             HHHHHHHHHHHhcCCCceEEEEeEECC--CCcEEEEEecCCCcHHHHHHhcC----------------------------
Confidence            567999999999999999999996643  46899999995 69999997432                            


Q ss_pred             CcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          95 PTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        95 ~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                           ...+++..++.++.||+.|| .|||+..    .+-|+++.+
T Consensus        96 -----~~~~~~~~~~~~~~~l~~al-~~lH~~~i~H~di~p~Nili  135 (260)
T cd05070          96 -----GRALKLPNLVDMAAQVAAGM-AYIERMNYIHRDLRSANILV  135 (260)
T ss_pred             -----CCCCCHHHHHHHHHHHHHHH-HHHHHCCcccCCCccceEEE
Confidence                 12578889999999999999 9999865    334888766

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.07  E-value=1.9e-09  Score=85.35  Aligned_cols=94  Identities=12%  Similarity=0.051  Sum_probs=70.6

Q ss_pred             HHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          16 EILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASR   94 (138)
Q Consensus        16 e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (138)
                      ..+.+|+..|++++||||+++++.+.+ .+..++||||+. ++|.+++.......+.                       
T Consensus        54 ~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~~-----------------------  109 (288)
T cd05061          54 IEFLNEASVMKGFTCHHVVRLLGVVSK-GQPTLVVMELMAHGDLKSYLRSLRPEAEN-----------------------  109 (288)
T ss_pred             HHHHHHHHHHHhCCCCCeeeEEEEEcC-CCCcEEEEeCCCCCCHHHHHHHhcccccc-----------------------
Confidence            456789999999999999999997764 568999999995 7999999754321000                       


Q ss_pred             CcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          95 PTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        95 ~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                        ......++..++..++.||++|| .|||+..    .+.|++|.+
T Consensus       110 --~~~~~~~~~~~~~~~~~~l~~~l-~~lH~~~i~H~dikp~nili  152 (288)
T cd05061         110 --NPGRPPPTLQEMIQMAAEIADGM-AYLNAKKFVHRDLAARNCMV  152 (288)
T ss_pred             --CCCCCCCCHHHHHHHHHHHHHHH-HHHHhCCCcCCCCChheEEE
Confidence              00011456678889999999999 9999865    345877764

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.07  E-value=7.5e-10  Score=87.09  Aligned_cols=92  Identities=11%  Similarity=0.001  Sum_probs=70.8

Q ss_pred             HHHHHHHHHHHhhhCC-CCCeeEEeceeeecCC----eEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYR-HPKILSVLHPIEECPD----ALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPA   88 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLr-HPnIL~l~e~~ee~~~----~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (138)
                      ..+.+.+|+.+|++++ ||||+++++.+.....    .+|++|||+.++|.+++......                    
T Consensus        43 ~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~--------------------  102 (295)
T cd07837          43 IPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSLYLVFEYLDSDLKKFMDSNGRG--------------------  102 (295)
T ss_pred             CchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceEEEEeeccCcCHHHHHHHhccc--------------------
Confidence            4456788999999996 5999999997654222    38999999998999988743211                    


Q ss_pred             CCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          89 NQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        89 ~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                ....+++..++.++.||++|| +|||+..    .+-|++|++
T Consensus       103 ----------~~~~~~~~~~~~~~~qi~~~L-~~LH~~~i~H~dl~~~nil~  143 (295)
T cd07837         103 ----------PGRPLPAKTIKSFMYQLLKGV-AHCHKHGVMHRDLKPQNLLV  143 (295)
T ss_pred             ----------CCCCCCHHHHHHHHHHHHHHH-HHHHHCCeeecCCChHHEEE
Confidence                      012589999999999999999 9999864    334777654

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.07  E-value=1.8e-09  Score=82.93  Aligned_cols=87  Identities=14%  Similarity=0.137  Sum_probs=71.2

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ..+.+++|+.+++++.||||+++++.++ +.+..++||||+. ++|.+++....                          
T Consensus        35 ~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~~~~~~~v~e~~~~~~l~~~l~~~~--------------------------   87 (251)
T cd05041          35 LKRKFLQEAEILKQYDHPNIVKLIGVCV-QKQPIYIVMELVPGGSLLTFLRKKK--------------------------   87 (251)
T ss_pred             HHHHHHHHHHHHHhCCCCCeEEEEEEEe-cCCCeEEEEEcCCCCcHHHHHHhcC--------------------------
Confidence            4567899999999999999999999665 4678999999995 69999987432                          


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                              ..+++..+...+.|+++|| +|||++.    .+-|+++++
T Consensus        88 --------~~~~~~~~~~~~~~~~~~l-~~lH~~~i~h~di~p~nili  126 (251)
T cd05041          88 --------NRLTVKKLLQMSLDAAAGM-EYLESKNCIHRDLAARNCLV  126 (251)
T ss_pred             --------CCCCHHHHHHHHHHHHHHH-HHHHhCCEehhhcCcceEEE
Confidence                    1467788889999999999 9999765    334888765

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.06  E-value=3.3e-10  Score=87.63  Aligned_cols=89  Identities=16%  Similarity=0.086  Sum_probs=70.9

Q ss_pred             HHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSAS   93 (138)
Q Consensus        15 ~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (138)
                      .....+|+..|++++||||+++++.+.+ .+..++||||+. ++|.+++......                         
T Consensus        46 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~l~~~~~~~~~~-------------------------   99 (260)
T cd08222          46 TVQANQEAQLLSKLDHPAIVKFHASFLE-RDAFCIITEYCEGRDLDCKLEELKHT-------------------------   99 (260)
T ss_pred             HHHHHHHHHHHHhCCCCcHHHHHHHHhc-CCceEEEEEeCCCCCHHHHHHHHhhc-------------------------
Confidence            3456789999999999999999997764 567999999995 6999998753211                         


Q ss_pred             CCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          94 RPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        94 ~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                            ...+++.+++.++.||++|| .|||+..    .+-|+++..
T Consensus       100 ------~~~~~~~~~~~~~~~l~~~l-~~lH~~~i~h~~l~~~nili  139 (260)
T cd08222         100 ------GKTLSENQVCEWFIQLLLGV-HYMHQRRILHRDLKAKNIFL  139 (260)
T ss_pred             ------ccccCHHHHHHHHHHHHHHH-HHHHHcCccccCCChhheEe
Confidence                  12689999999999999999 9999854    344776643

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.06  E-value=1.2e-09  Score=84.86  Aligned_cols=86  Identities=13%  Similarity=0.124  Sum_probs=70.0

Q ss_pred             HHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSAS   93 (138)
Q Consensus        15 ~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (138)
                      .+.+++|+.+|++++||||+++++.+.+  +..+++|||+. ++|.+++.....                          
T Consensus        45 ~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~v~e~~~~~~L~~~~~~~~~--------------------------   96 (260)
T cd05073          45 VEAFLAEANVMKTLQHDKLVKLHAVVTK--EPIYIITEFMAKGSLLDFLKSDEG--------------------------   96 (260)
T ss_pred             HHHHHHHHHHHHhcCCCCcceEEEEEcC--CCeEEEEEeCCCCcHHHHHHhCCc--------------------------
Confidence            4678899999999999999999997764  67899999995 699999974321                          


Q ss_pred             CCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          94 RPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        94 ~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                             ..+++.++..++.||+.|| .|||+..    .+-|++|++
T Consensus        97 -------~~~~~~~~~~~~~~l~~aL-~~lH~~~i~H~dl~p~ni~i  135 (260)
T cd05073          97 -------SKQPLPKLIDFSAQIAEGM-AFIEQRNYIHRDLRAANILV  135 (260)
T ss_pred             -------cccCHHHHHHHHHHHHHHH-HHHHhCCccccccCcceEEE
Confidence                   2467788999999999999 9999754    233777765

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.06  E-value=8.2e-10  Score=90.56  Aligned_cols=86  Identities=16%  Similarity=0.233  Sum_probs=69.3

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeec-----CCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEEC-----PDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPA   88 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~-----~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (138)
                      ..+.+.+|+.+|.+++||||+++++.+...     .+.+++++|++.++|.+++...                       
T Consensus        59 ~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~~~~~~~L~~~~~~~-----------------------  115 (345)
T cd07877          59 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ-----------------------  115 (345)
T ss_pred             HHHHHHHHHHHHHHcCCCcccceeeeeeecccccccccEEEEehhcccCHHHHHhcC-----------------------
Confidence            346778999999999999999999866532     2358999999988998887621                       


Q ss_pred             CCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          89 NQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        89 ~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                   .+++..++.++.||++|| +|||+..    .+-|++|++
T Consensus       116 -------------~l~~~~~~~i~~qi~~aL-~~LH~~~ivH~dlkp~NIll  153 (345)
T cd07877         116 -------------KLTDDHVQFLIYQILRGL-KYIHSADIIHRDLKPSNLAV  153 (345)
T ss_pred             -------------CCCHHHHHHHHHHHHHHH-HHHHHCCeeecCCChHHEEE
Confidence                         478889999999999999 9999865    344777664

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.06  E-value=9.6e-10  Score=88.45  Aligned_cols=89  Identities=9%  Similarity=0.057  Sum_probs=71.3

Q ss_pred             chHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccc-cccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          11 KETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPV-YASLASILAFQESPAPNHSTNPVTGGSGSSPPPAN   89 (138)
Q Consensus        11 ~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V-~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (138)
                      .....+.+.+|+.+|++++||||+++++.+..  +..++++||+ .++|.+++....                       
T Consensus        49 ~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~--~~~~~v~e~~~~g~l~~~l~~~~-----------------------  103 (316)
T cd05108          49 SPKANKEILDEAYVMASVDNPHVCRLLGICLT--STVQLITQLMPFGCLLDYVREHK-----------------------  103 (316)
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcC--CCceeeeecCCCCCHHHHHHhcc-----------------------
Confidence            34456778899999999999999999996653  4578999998 479999997532                       


Q ss_pred             CCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          90 QSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        90 ~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                 ..+++..+..++.||+.|| +|||+..    .+.|++|.+
T Consensus       104 -----------~~~~~~~~~~~~~qi~~~L-~~LH~~~iiH~dlkp~Nill  142 (316)
T cd05108         104 -----------DNIGSQYLLNWCVQIAKGM-NYLEERRLVHRDLAARNVLV  142 (316)
T ss_pred             -----------ccCCHHHHHHHHHHHHHHH-HHHHhcCeeccccchhheEe
Confidence                       1477788889999999999 9999854    445777654

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.06  E-value=9.2e-10  Score=89.25  Aligned_cols=85  Identities=14%  Similarity=0.204  Sum_probs=67.7

Q ss_pred             HHHHHHHHHHhhh-CCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEV-YRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        15 ~e~lrrEi~~L~r-LrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      .+.+.+|..+|.. +.||||+++++.++ +.+.+|+||||+. ++|.+.+....                          
T Consensus        39 ~~~~~~e~~~l~~~~~hp~i~~~~~~~~-~~~~~~lv~e~~~gg~L~~~~~~~~--------------------------   91 (316)
T cd05592          39 VECTMVERRVLALAWEHPFLTHLFCTFQ-TKEHLFFVMEYLNGGDLMFHIQSSG--------------------------   91 (316)
T ss_pred             HHHHHHHHHHHHhccCCCCccceeeEEE-cCCEEEEEEcCCCCCcHHHHHHHcC--------------------------
Confidence            4455667777765 58999999999776 5779999999995 79998887432                          


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                               .+++.+++.++.||+.|| .|||+..    .+.|++|.+
T Consensus        92 ---------~~~~~~~~~~~~qi~~al-~~LH~~~ivH~dlkp~Nill  129 (316)
T cd05592          92 ---------RFDEARARFYAAEIICGL-QFLHKKGIIYRDLKLDNVLL  129 (316)
T ss_pred             ---------CCCHHHHHHHHHHHHHHH-HHHHHCCEEeCCCCHHHeEE
Confidence                     588899999999999999 9999865    345777654

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.06  E-value=2e-09  Score=84.29  Aligned_cols=95  Identities=7%  Similarity=0.018  Sum_probs=70.7

Q ss_pred             HHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSAS   93 (138)
Q Consensus        15 ~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (138)
                      ...+.+|+.+|++++||||+++++.+.+ .+..++||||+. ++|.+++.......                        
T Consensus        53 ~~~~~~e~~~l~~l~~~~iv~~~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~~~~------------------------  107 (277)
T cd05062          53 RIEFLNEASVMKEFNCHHVVRLLGVVSQ-GQPTLVIMELMTRGDLKSYLRSLRPEM------------------------  107 (277)
T ss_pred             HHHHHHHHHHHHhCCCCCeeeEEEEEcC-CCCeEEEEecCCCCCHHHHHHHcCccc------------------------
Confidence            3457899999999999999999997764 568999999995 69999997532110                        


Q ss_pred             CCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          94 RPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        94 ~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                       ........++...+..++.|+++|| .|||+..    .+.|++|.+
T Consensus       108 -~~~~~~~~~~~~~~~~~~~~l~~~l-~~lH~~~~vH~dlkp~Nil~  152 (277)
T cd05062         108 -ENNPVQAPPSLKKMIQMAGEIADGM-AYLNANKFVHRDLAARNCMV  152 (277)
T ss_pred             -cccccccCCCHHHHHHHHHHHHHHH-HHHHHCCcccCCcchheEEE
Confidence             0000012467778889999999999 9999854    334777765

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.06  E-value=3.9e-10  Score=90.65  Aligned_cols=89  Identities=19%  Similarity=0.233  Sum_probs=72.8

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeecC----CeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEECP----DALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPP   87 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~----~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~   87 (138)
                      ....+.+.+|+..|++++||||+++++.+.+..    ..+|++|||+.++|.+++....                     
T Consensus        40 ~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~---------------------   98 (330)
T cd07834          40 LIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVYIVTELMETDLHKVIKSPQ---------------------   98 (330)
T ss_pred             chhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceEEEecchhhhHHHHHhCCC---------------------
Confidence            445578899999999999999999999776533    3799999999889998886321                     


Q ss_pred             CCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          88 ANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        88 ~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                    .+++..++.++.||++|| .|||+..    .+-|++|.+
T Consensus        99 --------------~l~~~~~~~i~~~l~~~l-~~LH~~gi~H~dlkp~nili  136 (330)
T cd07834          99 --------------PLTDDHIQYFLYQILRGL-KYLHSANVIHRDLKPSNILV  136 (330)
T ss_pred             --------------CCCHHHHHHHHHHHHHHH-HHHHhCCeecCCCCHHHEEE
Confidence                          588999999999999999 9999864    334666654

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.06  E-value=8.1e-10  Score=89.62  Aligned_cols=86  Identities=16%  Similarity=0.215  Sum_probs=69.7

Q ss_pred             HHHHHHHHHHHhhhC-CCCCeeEEeceeeec-CCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVY-RHPKILSVLHPIEEC-PDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        14 ~~e~lrrEi~~L~rL-rHPnIL~l~e~~ee~-~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      ....+.+|+.+|++| +||||+++++.+... ...+++||||+.++|.+.+...                          
T Consensus        49 ~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~--------------------------  102 (337)
T cd07852          49 DAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIYLVFEYMETDLHAVIRAN--------------------------  102 (337)
T ss_pred             hhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEEEEecccccCHHHHHhcC--------------------------
Confidence            345677899999999 999999999976543 3479999999998999888632                          


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                .+++..++.++.||+.|| .|||+..    .+-|++|++
T Consensus       103 ----------~~~~~~~~~i~~qi~~~L-~~LH~~~i~H~dl~p~nill  140 (337)
T cd07852         103 ----------ILEDVHKRYIMYQLLKAL-KYIHSGNVIHRDLKPSNILL  140 (337)
T ss_pred             ----------CCCHHHHHHHHHHHHHHH-HHHHHCCeecCCCCHHHEEE
Confidence                      467788899999999999 9999753    344777664

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.05  E-value=1.3e-09  Score=86.48  Aligned_cols=88  Identities=13%  Similarity=0.044  Sum_probs=70.7

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ..+.+.+|+.+|.+|+||||+.+.+.+. +++.++++|||+. ++|.+.+.....                         
T Consensus        43 ~~~~~~~E~~il~~l~~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~-------------------------   96 (285)
T cd05632          43 GESMALNEKQILEKVNSQFVVNLAYAYE-TKDALCLVLTIMNGGDLKFHIYNMGN-------------------------   96 (285)
T ss_pred             HHHHHHHHHHHHHHcCCcCceeEEEEEe-cCCEEEEEEEeccCccHHHHHHHhcC-------------------------
Confidence            3455788999999999999999999776 4679999999996 689888864321                         


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                              ..+++..+..++.|++.|| +|||+..    .+.|++|.+
T Consensus        97 --------~~~~~~~~~~~~~ql~~~l-~~lH~~~iiH~dikp~Nili  135 (285)
T cd05632          97 --------PGFEEERALFYAAEILCGL-EDLHRENTVYRDLKPENILL  135 (285)
T ss_pred             --------CCCCHHHHHHHHHHHHHHH-HHHHhCCeeecCCCHHHEEE
Confidence                    1588999999999999999 9999754    334666654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.05  E-value=5.3e-10  Score=86.47  Aligned_cols=88  Identities=15%  Similarity=0.202  Sum_probs=73.2

Q ss_pred             hHHHHHHHHHHHHhhhCC-CCCeeEEeceeeecCCeEEEEeccc-cccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYR-HPKILSVLHPIEECPDALAFATEPV-YASLASILAFQESPAPNHSTNPVTGGSGSSPPPAN   89 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLr-HPnIL~l~e~~ee~~~~L~fVtE~V-~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (138)
                      +...+.+.+|+.++.+++ ||||+++++.++ +.+.+++|||++ .++|.+++....                       
T Consensus        42 ~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~-----------------------   97 (280)
T cd05581          42 EKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQ-DEENLYFVLEYAPNGELLQYIRKYG-----------------------   97 (280)
T ss_pred             hHHHHHHHHHHHHHHhcccCCCchhHHHHhc-CCceEEEEEcCCCCCcHHHHHHHcC-----------------------
Confidence            344577899999999999 999999999776 467899999999 679999997432                       


Q ss_pred             CCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          90 QSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        90 ~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                  .+++.++..++.||+.|| .|||+..    .+-|++|++
T Consensus        98 ------------~l~~~~~~~i~~ql~~~l-~~Lh~~~~~H~dl~~~ni~i  135 (280)
T cd05581          98 ------------SLDEKCTRFYAAEILLAL-EYLHSKGIIHRDLKPENILL  135 (280)
T ss_pred             ------------CCCHHHHHHHHHHHHHHH-HHHHHCCeeecCCCHHHeEE
Confidence                        588899999999999999 9999765    344777665

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.05  E-value=1.6e-09  Score=84.57  Aligned_cols=88  Identities=13%  Similarity=0.066  Sum_probs=71.9

Q ss_pred             hHHHHHHHHHHHHhhhCC---CCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYR---HPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPP   87 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLr---HPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~   87 (138)
                      +...+.+.+|+.++++|+   ||||+++++.+++ .+..++||||+. ++|.+++...                      
T Consensus        40 ~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~----------------------   96 (277)
T cd06917          40 DDDVSDIQREVALLSQLRQSQPPNITKYYGSYLK-GPRLWIIMEYAEGGSVRTLMKAG----------------------   96 (277)
T ss_pred             chhHHHHHHHHHHHHHhccCCCCCeeeEeeeeee-CCEEEEEEecCCCCcHHHHHHcc----------------------
Confidence            344567889999999997   9999999997764 678999999995 6999888621                      


Q ss_pred             CCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcceee
Q psy3822          88 ANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAFC  137 (138)
Q Consensus        88 ~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~~  137 (138)
                                    .+++..+..++.||++|| .|||+..    .+-|++|++.
T Consensus        97 --------------~l~~~~~~~i~~~i~~~l-~~lh~~~i~H~dl~p~ni~i~  135 (277)
T cd06917          97 --------------PIAEKYISVIIREVLVAL-KYIHKVGVIHRDIKAANILVT  135 (277)
T ss_pred             --------------CCCHHHHHHHHHHHHHHH-HHHHhCCcccCCcCHHHEEEc
Confidence                          478889999999999999 9999854    3447777653

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.05  E-value=1.4e-09  Score=86.37  Aligned_cols=86  Identities=14%  Similarity=0.060  Sum_probs=70.3

Q ss_pred             HHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          16 EILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASR   94 (138)
Q Consensus        16 e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (138)
                      +.+.+|+.+|.+|+||||+.++..+++ .+.+++||||+. ++|.+.+.....                           
T Consensus        45 ~~~~~E~~il~~l~~~~iv~~~~~~~~-~~~~~lv~e~~~~g~L~~~~~~~~~---------------------------   96 (285)
T cd05631          45 AMALNEKRILEKVNSRFVVSLAYAYET-KDALCLVLTIMNGGDLKFHIYNMGN---------------------------   96 (285)
T ss_pred             HHHHHHHHHHHhcCCCcEEEEEEEEcc-CCeEEEEEEecCCCcHHHHHHhhCC---------------------------
Confidence            456789999999999999999997764 678999999995 699888864321                           


Q ss_pred             CcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          95 PTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        95 ~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                            ..+++..+..++.||+.|| +|||+..    .+.|+++.+
T Consensus        97 ------~~~~~~~~~~~~~qi~~~l-~~lH~~~iiH~dikp~Nill  135 (285)
T cd05631          97 ------PGFDEQRAIFYAAELCCGL-EDLQRERIVYRDLKPENILL  135 (285)
T ss_pred             ------CCCCHHHHHHHHHHHHHHH-HHHHhCCEEeCCCCHHHEEE
Confidence                  1588899999999999999 9999854    445777665

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.05  E-value=8.2e-10  Score=84.38  Aligned_cols=93  Identities=14%  Similarity=0.088  Sum_probs=74.3

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      +...+.+.+|++.|++++||||+++++.+.+ .+..++||||+. ++|.+++......                      
T Consensus        40 ~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~~v~e~~~~~~L~~~~~~~~~~----------------------   96 (256)
T cd08530          40 QKEREDAVNEIRILASVNHPNIISYKEAFLD-GNKLCIVMEYAPFGDLSKAISKRKKK----------------------   96 (256)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCchhhhhhhcc-CCEEEEEehhcCCCCHHHHHHHHHhh----------------------
Confidence            3445667889999999999999999998875 679999999995 6999998753211                      


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcceee
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAFC  137 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~~  137 (138)
                               ...+++..+..++.||+.|| .|||+..    .+-|++++++
T Consensus        97 ---------~~~~~~~~~~~~~~~l~~al-~~lh~~~i~h~~l~~~ni~~~  137 (256)
T cd08530          97 ---------RKLIPEQEIWRIFIQLLRGL-QALHEQKILHRDLKSANILLV  137 (256)
T ss_pred             ---------cCCCCHHHHHHHHHHHHHHH-HHHhhCCcccCCCCcceEEEe
Confidence                     12588899999999999999 9999764    3448887764

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.05  E-value=1.1e-09  Score=87.78  Aligned_cols=86  Identities=14%  Similarity=0.150  Sum_probs=72.1

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ..+.+.+|+.+|++++||||+.+++.+.+ .+.+++||||+. ++|.+++...                           
T Consensus        59 ~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~---------------------------  110 (296)
T cd06655          59 KKELIINEILVMKELKNPNIVNFLDSFLV-GDELFVVMEYLAGGSLTDVVTET---------------------------  110 (296)
T ss_pred             hHHHHHHHHHHHHhcCCCceeeeeeeEec-CceEEEEEEecCCCcHHHHHHhc---------------------------
Confidence            35678999999999999999999997764 678999999995 6999888621                           


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcceee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAFC  137 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~~  137 (138)
                               .+++.++..++.||+.|| .|||+..    .+-|+++++.
T Consensus       111 ---------~l~~~~~~~i~~~l~~al-~~LH~~~i~H~dL~p~Nili~  149 (296)
T cd06655         111 ---------CMDEAQIAAVCRECLQAL-EFLHANQVIHRDIKSDNVLLG  149 (296)
T ss_pred             ---------CCCHHHHHHHHHHHHHHH-HHHHHCCcccCCCCHHHEEEC
Confidence                     478899999999999999 9999765    4458887763

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.05  E-value=1.3e-09  Score=84.24  Aligned_cols=86  Identities=13%  Similarity=0.109  Sum_probs=70.4

Q ss_pred             HHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSAS   93 (138)
Q Consensus        15 ~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (138)
                      .+.+.+|+.+|++++||||+++++.+.+  +.++++|||+. ++|.+++.....                          
T Consensus        43 ~~~~~~e~~~l~~~~~~~i~~~~~~~~~--~~~~~v~e~~~~~~L~~~l~~~~~--------------------------   94 (254)
T cd05083          43 AQAFLEETAVMTKLHHKNLVRLLGVILH--NGLYIVMELMSKGNLVNFLRTRGR--------------------------   94 (254)
T ss_pred             HHHHHHHHHHHHhCCCCCcCeEEEEEcC--CCcEEEEECCCCCCHHHHHHhcCc--------------------------
Confidence            4678899999999999999999997754  45899999996 699999975321                          


Q ss_pred             CCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          94 RPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        94 ~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                             ..+++..+..++.||++|| .|||+..    .+.|++|.+
T Consensus        95 -------~~~~~~~~~~~~~qi~~al-~~lH~~~~~H~dl~p~nili  133 (254)
T cd05083          95 -------ALVSVIQLLQFSLDVAEGM-EYLESKKLVHRDLAARNILV  133 (254)
T ss_pred             -------CCCCHHHHHHHHHHHHHHH-HHHHhCCeeccccCcceEEE
Confidence                   1477888999999999999 9999754    345888765

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.04  E-value=1.5e-09  Score=85.74  Aligned_cols=87  Identities=11%  Similarity=0.046  Sum_probs=70.4

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      ...+.+.+|+..|.+++||||+++++...  ...++++|||+. ++|.+++....                         
T Consensus        51 ~~~~~~~~~~~~l~~l~h~~iv~~~~~~~--~~~~~~i~e~~~~gsL~~~l~~~~-------------------------  103 (279)
T cd05111          51 QTFQEITDHMLAMGSLDHAYIVRLLGICP--GASLQLVTQLSPLGSLLDHVRQHR-------------------------  103 (279)
T ss_pred             HHHHHHHHHHHHHhcCCCCCcceEEEEEC--CCccEEEEEeCCCCcHHHHHHhcc-------------------------
Confidence            34567788999999999999999999543  356889999985 79999997432                         


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                               ..+++..+..++.||+.|| .|||+..    .+.|++|.+
T Consensus       104 ---------~~~~~~~~~~i~~qi~~~l-~~lH~~~iiH~dlkp~nili  142 (279)
T cd05111         104 ---------DSLDPQRLLNWCVQIAKGM-YYLEEHRMVHRNLAARNILL  142 (279)
T ss_pred             ---------cCCCHHHHHHHHHHHHHHH-HHHHHCCEeccccCcceEEE
Confidence                     1578889999999999999 9999855    345887764

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.04  E-value=1.1e-09  Score=95.69  Aligned_cols=92  Identities=12%  Similarity=0.000  Sum_probs=71.1

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ...+.+++|+.+|++|+||||+++++.+++ .+..|++||++..+|.+++.......                       
T Consensus       205 ~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~-~~~~~lv~e~~~~~l~~~l~~~~~~~-----------------------  260 (501)
T PHA03210        205 RAAIQLENEILALGRLNHENILKIEEILRS-EANTYMITQKYDFDLYSFMYDEAFDW-----------------------  260 (501)
T ss_pred             HHHHHHHHHHHHHHhCCCCCcCcEeEEEEE-CCeeEEEEeccccCHHHHHhhccccc-----------------------
Confidence            345678999999999999999999997764 67899999999888988886432110                       


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                             .......+++.++.||++|| +|||+..    .+.|++|.+
T Consensus       261 -------~~~~~~~~~~~i~~ql~~aL-~yLH~~gIiHrDLKP~NILl  300 (501)
T PHA03210        261 -------KDRPLLKQTRAIMKQLLCAV-EYIHDKKLIHRDIKLENIFL  300 (501)
T ss_pred             -------cccccHHHHHHHHHHHHHHH-HHHHhCCeecCCCCHHHEEE
Confidence                   01234567889999999999 9999864    344777765

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.04  E-value=1.2e-09  Score=88.66  Aligned_cols=86  Identities=13%  Similarity=0.111  Sum_probs=69.5

Q ss_pred             HHHHHHHHHHHhhhC-CCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVY-RHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        14 ~~e~lrrEi~~L~rL-rHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      ..+.+.+|..+|.++ +||||+++++.+++ ++.+|+||||+. ++|.+.+....                         
T Consensus        38 ~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~-~~~~~lv~E~~~~g~L~~~i~~~~-------------------------   91 (316)
T cd05620          38 DVECTMVEKRVLALAWENPFLTHLYCTFQT-KEHLFFVMEFLNGGDLMFHIQDKG-------------------------   91 (316)
T ss_pred             hHHHHHHHHHHHHhccCCCCccCeeEEEEe-CCEEEEEECCCCCCcHHHHHHHcC-------------------------
Confidence            345677888888765 89999999997764 779999999995 69998886432                         


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                .+++.+++.++.||++|| +|||+..    .+.|++|.+
T Consensus        92 ----------~~~~~~~~~~~~qi~~~l-~~lH~~~ivHrDlkp~Nil~  129 (316)
T cd05620          92 ----------RFDLYRATFYAAEIVCGL-QFLHSKGIIYRDLKLDNVML  129 (316)
T ss_pred             ----------CCCHHHHHHHHHHHHHHH-HHHHHCCeEecCCCHHHeEE
Confidence                      578889999999999999 9999864    344777654

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.04  E-value=1.5e-09  Score=86.78  Aligned_cols=84  Identities=13%  Similarity=0.122  Sum_probs=70.8

Q ss_pred             HHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSAS   93 (138)
Q Consensus        15 ~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (138)
                      .+.+++|+.+|++++||||+++++.+.. .+.+++||||+. ++|.+++...                            
T Consensus        61 ~~~~~~e~~~l~~~~h~~v~~~~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~----------------------------  111 (296)
T cd06654          61 KELIINEILVMRENKNPNIVNYLDSYLV-GDELWVVMEYLAGGSLTDVVTET----------------------------  111 (296)
T ss_pred             HHHHHHHHHHHHhCCCCCEeeEEEEEEe-CCEEEEeecccCCCCHHHHHHhc----------------------------
Confidence            4778999999999999999999997764 678999999995 6999988632                            


Q ss_pred             CCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          94 RPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        94 ~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                              .+++.++..++.||+.|| .|||+..    .+-|+++.+
T Consensus       112 --------~~~~~~~~~i~~ql~~aL-~~LH~~gi~H~dLkp~Nill  149 (296)
T cd06654         112 --------CMDEGQIAAVCRECLQAL-EFLHSNQVIHRDIKSDNILL  149 (296)
T ss_pred             --------CCCHHHHHHHHHHHHHHH-HHHHHCCcccCCCCHHHEEE
Confidence                    467789999999999999 9999765    445777765

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.04  E-value=1.3e-09  Score=88.61  Aligned_cols=85  Identities=13%  Similarity=0.153  Sum_probs=68.6

Q ss_pred             HHHHHHHHHHhhh-CCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEV-YRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        15 ~e~lrrEi~~L~r-LrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      .+...+|..+|.+ ++||||+++++.++ +++.+++||||+. ++|.+.+....                          
T Consensus        39 ~~~~~~e~~~l~~~~~hp~iv~~~~~~~-~~~~~~lv~ey~~~g~L~~~l~~~~--------------------------   91 (316)
T cd05619          39 VECTMVEKRVLSLAWEHPFLTHLYCTFQ-TKENLFFVMEYLNGGDLMFHIQSCH--------------------------   91 (316)
T ss_pred             HHHHHHHHHHHHhccCCCcCcceEEEEE-eCCEEEEEEeCCCCCcHHHHHHHcC--------------------------
Confidence            3556778888876 59999999999776 4779999999995 79999987432                          


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                               .+++.+++.++.||+.|| .|||+..    .+.|++|.+
T Consensus        92 ---------~~~~~~~~~~~~qi~~al-~~LH~~~ivHrdikp~Nil~  129 (316)
T cd05619          92 ---------KFDLPRATFYAAEIICGL-QFLHSKGIVYRDLKLDNILL  129 (316)
T ss_pred             ---------CCCHHHHHHHHHHHHHHH-HHHHhCCeEeCCCCHHHEEE
Confidence                     578889999999999999 9999864    344777654

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.04  E-value=8.9e-10  Score=96.18  Aligned_cols=85  Identities=13%  Similarity=0.043  Sum_probs=70.3

Q ss_pred             HHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          16 EILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASRP   95 (138)
Q Consensus        16 e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   95 (138)
                      ..+.+|+.+|++|+||||+++++... ..+..++|||++.++|.+.+....                             
T Consensus       205 ~~~~~E~~iL~~L~HpnIv~l~~~~~-~~~~~~lv~e~~~~~L~~~l~~~~-----------------------------  254 (461)
T PHA03211        205 ASSVHEARLLRRLSHPAVLALLDVRV-VGGLTCLVLPKYRSDLYTYLGARL-----------------------------  254 (461)
T ss_pred             cCHHHHHHHHHHCCCCCCCcEEEEEE-ECCEEEEEEEccCCCHHHHHHhcC-----------------------------
Confidence            34578999999999999999999665 467899999999899999886432                             


Q ss_pred             cccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          96 THAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        96 ~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                           ..|++.+++.++.||+.|| .|||+..    .+.|++|.+
T Consensus       255 -----~~l~~~~~~~i~~qi~~aL-~yLH~~gIvHrDLKP~NILl  293 (461)
T PHA03211        255 -----RPLGLAQVTAVARQLLSAI-DYIHGEGIIHRDIKTENVLV  293 (461)
T ss_pred             -----CCCCHHHHHHHHHHHHHHH-HHHHHCCEEECcCCHHHEEE
Confidence                 1588999999999999999 9999864    344777665

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.04  E-value=1.9e-09  Score=82.95  Aligned_cols=85  Identities=14%  Similarity=0.090  Sum_probs=69.6

Q ss_pred             HHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          16 EILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASR   94 (138)
Q Consensus        16 e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (138)
                      +.+.+|+++|+++.||||+++++.++ .....+++|||+. ++|.+++....                            
T Consensus        44 ~~~~~e~~~l~~l~~~~i~~~~~~~~-~~~~~~~v~e~~~~~~L~~~~~~~~----------------------------   94 (256)
T cd05112          44 EDFIEEAQVMMKLSHPKLVQLYGVCT-ERSPICLVFEFMEHGCLSDYLRAQR----------------------------   94 (256)
T ss_pred             HHHHHHHHHHHhCCCCCeeeEEEEEc-cCCceEEEEEcCCCCcHHHHHHhCc----------------------------
Confidence            45788999999999999999999665 4678999999995 69999987432                            


Q ss_pred             CcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          95 PTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        95 ~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                            ..+++..++.++.|+++|| .|||+..    .+-|+++++
T Consensus        95 ------~~~~~~~~~~~~~~l~~~l-~~lH~~~i~h~dl~p~ni~i  133 (256)
T cd05112          95 ------GKFSQETLLGMCLDVCEGM-AYLESSNVIHRDLAARNCLV  133 (256)
T ss_pred             ------cCCCHHHHHHHHHHHHHHH-HHHHHCCccccccccceEEE
Confidence                  1477888999999999999 9999754    334887765

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.04  E-value=5.6e-10  Score=86.64  Aligned_cols=90  Identities=18%  Similarity=0.141  Sum_probs=74.3

Q ss_pred             chHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          11 KETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        11 ~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      .+...+.+.+|+..|++++||||+++++.+++ .+.+++||||+.++|.+++....                        
T Consensus        38 ~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~~~v~e~~~~~l~~~i~~~~------------------------   92 (282)
T cd07829          38 EEGIPSTALREISLLKELKHPNIVKLLDVIHT-ERKLYLVFEYCDMDLKKYLDKRP------------------------   92 (282)
T ss_pred             cccccHHHHHHHHHHHhcCCCCHHHHHhhhhc-CCceEEEecCcCcCHHHHHHhhc------------------------
Confidence            34456778899999999999999999997764 67899999999989999998532                        


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                ..+++.++..++.||+.|| .|||+..    .+-|++|++
T Consensus        93 ----------~~~~~~~~~~~~~~i~~~l-~~LH~~~i~H~~l~~~ni~~  131 (282)
T cd07829          93 ----------GPLSPNLIKSIMYQLLRGL-AYCHSHRILHRDLKPQNILI  131 (282)
T ss_pred             ----------cCCCHHHHHHHHHHHHHHH-HHHHHCCcccCCCChheEEE
Confidence                      1588999999999999999 9999864    334776654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.04  E-value=1.2e-09  Score=98.78  Aligned_cols=88  Identities=13%  Similarity=0.167  Sum_probs=73.0

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccc-cccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPV-YASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V-~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      ....+.+.+|+..|..++||||++++..+. +.+.+|+||||+ .++|.+++....                        
T Consensus        45 ~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~-~~~~~~lVmEy~~g~~L~~li~~~~------------------------   99 (669)
T cd05610          45 KNMVHQVQAERDALALSKSPFIVHLYYSLQ-SANNVYLVMEYLIGGDVKSLLHIYG------------------------   99 (669)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCcCeEEEEEE-ECCEEEEEEeCCCCCCHHHHHHhcC------------------------
Confidence            345678899999999999999999998776 467999999999 479999997432                        


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                 .+++..++.++.||+.|| +|||...    .+.|++|.+
T Consensus       100 -----------~l~~~~~~~i~~qil~aL-~yLH~~gIiHrDLKP~NILl  137 (669)
T cd05610         100 -----------YFDEEMAVKYISEVALAL-DYLHRHGIIHRDLKPDNMLI  137 (669)
T ss_pred             -----------CCCHHHHHHHHHHHHHHH-HHHHhCCEEeCCccHHHEEE
Confidence                       478889999999999999 9999863    334777765

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.03  E-value=1.9e-09  Score=86.60  Aligned_cols=88  Identities=14%  Similarity=0.102  Sum_probs=71.8

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ...+.+.+|+.+|++++||||+++++.+++ .+..++||||+.++|.+++....                          
T Consensus        57 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~~~l~~~~~~~~--------------------------  109 (308)
T cd06634          57 EKWQDIIKEVRFLQKLRHPNTIQYRGCYLR-EHTAWLVMEYCLGSASDLLEVHK--------------------------  109 (308)
T ss_pred             HHHHHHHHHHHHHHhCCCCCcccEEEEEEc-CCeeEEEEEccCCCHHHHHHHcC--------------------------
Confidence            345567789999999999999999997764 67899999999989988876322                          


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                              ..+++.++..++.||+.|| .|||+..    .+-|+++.+
T Consensus       110 --------~~l~~~~~~~~~~~l~~~l-~~LH~~~i~H~dl~p~nil~  148 (308)
T cd06634         110 --------KPLQEVEIAAVTHGALQGL-AYLHSHNMIHRDVKAGNILL  148 (308)
T ss_pred             --------CCCCHHHHHHHHHHHHHHH-HHHHhCCcccCCCCHHhEEE
Confidence                    1478899999999999999 9999754    344777665

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>KOG0610|consensus

Probab=99.03  E-value=9.3e-10  Score=96.29  Aligned_cols=88  Identities=16%  Similarity=0.156  Sum_probs=75.3

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      ..+.++.-|-.+|+.|.||.+.+||..|+ +.+.+|+|||||. |+|..+++++..                        
T Consensus       119 kKl~Ra~tE~eIL~~lDHPFlPTLYa~fe-t~~~~cl~meyCpGGdL~~LrqkQp~------------------------  173 (459)
T KOG0610|consen  119 KKLKRAQTEREILSLLDHPFLPTLYASFE-TDKYSCLVMEYCPGGDLHSLRQKQPG------------------------  173 (459)
T ss_pred             hHHHHHHHHHHHHHhcCCCccchhhheee-ccceeEEEEecCCCccHHHHHhhCCC------------------------
Confidence            44577788999999999999999999887 6789999999994 799999886542                        


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcce
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVA  135 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~  135 (138)
                               ..|+|..++.++..|+-|| +|||--.    .+.|.+|-
T Consensus       174 ---------~~fse~~aRFYaAEvl~AL-EYLHmlGivYRDLKPENIL  211 (459)
T KOG0610|consen  174 ---------KRFSESAARFYAAEVLLAL-EYLHMLGIVYRDLKPENIL  211 (459)
T ss_pred             ---------CccchhhHHHHHHHHHHHH-HHHHhhceeeccCCcceeE
Confidence                     3799999999999999999 9999765    55687763

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.03  E-value=1.3e-09  Score=84.88  Aligned_cols=83  Identities=16%  Similarity=0.157  Sum_probs=67.8

Q ss_pred             HHHHHHhhhCC-CCCeeEEeceeeecC-CeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q psy3822          19 RLGVKQLEVYR-HPKILSVLHPIEECP-DALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASRPT   96 (138)
Q Consensus        19 rrEi~~L~rLr-HPnIL~l~e~~ee~~-~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   96 (138)
                      .+|+..|.++. ||||+++++.+++.. +.+++||||+.++|.+.+....                              
T Consensus        45 ~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~------------------------------   94 (282)
T cd07831          45 LREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFELMDMNLYELIKGRK------------------------------   94 (282)
T ss_pred             HHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEecCCccHHHHHHhcc------------------------------
Confidence            47999999996 999999999777531 6899999999888888886432                              


Q ss_pred             ccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          97 HAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        97 ~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                          ..+++.++..++.||+.|| +|||+..    .+-|++|++
T Consensus        95 ----~~~~~~~~~~~~~qi~~~L-~~LH~~~i~H~dl~p~ni~l  133 (282)
T cd07831          95 ----RPLPEKRVKSYMYQLLKSL-DHMHRNGIFHRDIKPENILI  133 (282)
T ss_pred             ----CCCCHHHHHHHHHHHHHHH-HHHHHCCceecccCHHHEEE
Confidence                1588999999999999999 9999865    334777765

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.03  E-value=2.6e-09  Score=91.14  Aligned_cols=53  Identities=17%  Similarity=0.138  Sum_probs=44.8

Q ss_pred             hHHHHHHHHHHHHhhhCC-CCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhc
Q psy3822          12 ETVTEILRLGVKQLEVYR-HPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQ   65 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLr-HPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~   65 (138)
                      +...+.+.+|+.+|.+|. ||||+++++.+. +.+.+++||||+. ++|.++|...
T Consensus        81 ~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~-~~~~~~iv~E~~~~g~L~~~l~~~  135 (401)
T cd05107          81 SSEKQALMSELKIMSHLGPHLNIVNLLGACT-KGGPIYIITEYCRYGDLVDYLHRN  135 (401)
T ss_pred             hhHHHHHHHHHHHHHhcCCCCCeEEEEEEEc-cCCCcEEEEeccCCCcHHHHHHhc
Confidence            344567889999999997 999999999765 4678999999995 7999999754

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>KOG0658|consensus

Probab=99.03  E-value=1.4e-10  Score=99.58  Aligned_cols=84  Identities=17%  Similarity=0.192  Sum_probs=68.1

Q ss_pred             HHHHHHhhhCCCCCeeEEeceeeecCC----eEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          19 RLGVKQLEVYRHPKILSVLHPIEECPD----ALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASR   94 (138)
Q Consensus        19 rrEi~~L~rLrHPnIL~l~e~~ee~~~----~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (138)
                      .||.++|++|.|||||++...+..+.+    .+.+|||||..+|.++++...+.                          
T Consensus        65 nrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVleymP~tL~~~~r~~~~~--------------------------  118 (364)
T KOG0658|consen   65 NRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEYMPETLYRVIRHYTRA--------------------------  118 (364)
T ss_pred             cHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHhchHHHHHHHHHHhhc--------------------------
Confidence            589999999999999999998876432    68899999999999999854321                          


Q ss_pred             CcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcc
Q psy3822          95 PTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSV  134 (138)
Q Consensus        95 ~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~  134 (138)
                           ...++.++||.+..||..|| .|||+..    ...|.++
T Consensus       119 -----~~~mp~~~iKLYt~Qlfrgl-~yLh~~~IcHRDIKPqNl  156 (364)
T KOG0658|consen  119 -----NQRMPLLEIKLYTYQLFRGL-AYLHSHGICHRDIKPQNL  156 (364)
T ss_pred             -----CCCCceeeeHHHHHHHHHHH-HHHHhcCcccCCCChheE
Confidence                 12688899999999999999 9999833    3346665

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.02  E-value=1.8e-09  Score=84.64  Aligned_cols=90  Identities=14%  Similarity=0.087  Sum_probs=70.2

Q ss_pred             HHHHHHHHHHhhhC-CCCCeeEEeceeee----cCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVY-RHPKILSVLHPIEE----CPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPA   88 (138)
Q Consensus        15 ~e~lrrEi~~L~rL-rHPnIL~l~e~~ee----~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (138)
                      .+.+.+|+.++.+| +||||+++++...+    +.+.+++||||+. ++|.+++.....                     
T Consensus        58 ~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---------------------  116 (286)
T cd06638          58 DEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLK---------------------  116 (286)
T ss_pred             HHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCeEEEEEeecCCCCHHHHHHHhhc---------------------
Confidence            46678999999999 69999999986532    3457999999995 699998864211                     


Q ss_pred             CCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          89 NQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        89 ~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                ....+++..++..+.||++|| .|||+..    .+-|++|..
T Consensus       117 ----------~~~~~~~~~~~~~~~~i~~~l-~~lH~~~i~H~dlkp~nili  157 (286)
T cd06638         117 ----------RGERMEEPIIAYILHEALMGL-QHLHVNKTIHRDVKGNNILL  157 (286)
T ss_pred             ----------cCccccHHHHHHHHHHHHHHH-HHHHhCCccccCCCHHhEEE
Confidence                      012588999999999999999 9999754    345777654

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>KOG0033|consensus

Probab=99.02  E-value=6e-10  Score=93.35  Aligned_cols=85  Identities=13%  Similarity=0.140  Sum_probs=70.7

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      -++.|.||+.+-..|+||||+++.+.+.+ ....|+|.|+|. ++|..=+...                           
T Consensus        53 ~~e~l~rEarIC~~LqHP~IvrL~~ti~~-~~~~ylvFe~m~G~dl~~eIV~R---------------------------  104 (355)
T KOG0033|consen   53 DFQKLEREARICRKLQHPNIVRLHDSIQE-ESFHYLVFDLVTGGELFEDIVAR---------------------------  104 (355)
T ss_pred             cHHHHHHHHHHHHhcCCCcEeehhhhhcc-cceeEEEEecccchHHHHHHHHH---------------------------
Confidence            56889999999999999999999998875 568999999996 5776555432                           


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcce
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVA  135 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~  135 (138)
                              +.++|..+.+.+.||++|| .|||.+.    .+.|-++.
T Consensus       105 --------~~ySEa~aSH~~rQiLeal-~yCH~n~IvHRDvkP~nll  142 (355)
T KOG0033|consen  105 --------EFYSEADASHCIQQILEAL-AYCHSNGIVHRDLKPENLL  142 (355)
T ss_pred             --------HHHHHHHHHHHHHHHHHHH-HHHHhcCceeccCChhhee
Confidence                    2589999999999999999 9999876    44566553

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.02  E-value=9.2e-10  Score=88.18  Aligned_cols=85  Identities=16%  Similarity=0.167  Sum_probs=70.4

Q ss_pred             HHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSAS   93 (138)
Q Consensus        15 ~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (138)
                      .+.+.+|+..|.+++||||+++++.++. .+..+++|||+. ++|.+++...                            
T Consensus        62 ~~~~~~e~~~l~~l~hp~i~~~~~~~~~-~~~~~iv~e~~~~~~L~~~~~~~----------------------------  112 (297)
T cd06659          62 RELLFNEVVIMRDYQHQNVVEMYKSYLV-GEELWVLMEFLQGGALTDIVSQT----------------------------  112 (297)
T ss_pred             HHHHHHHHHHHHhCCCCchhhhhhheee-CCeEEEEEecCCCCCHHHHHhhc----------------------------
Confidence            4668899999999999999999997764 678999999995 6898877521                            


Q ss_pred             CCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcceee
Q psy3822          94 RPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAFC  137 (138)
Q Consensus        94 ~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~~  137 (138)
                              .+++..++.++.||++|| .|||+..    .+-|++|++.
T Consensus       113 --------~~~~~~~~~~~~qi~~~L-~~LH~~~ivH~dl~p~Nill~  151 (297)
T cd06659         113 --------RLNEEQIATVCESVLQAL-CYLHSQGVIHRDIKSDSILLT  151 (297)
T ss_pred             --------CCCHHHHHHHHHHHHHHH-HHHHhCCeecCCCCHHHeEEc
Confidence                    478899999999999999 9999764    3347777653

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.02  E-value=1.9e-09  Score=81.82  Aligned_cols=91  Identities=21%  Similarity=0.184  Sum_probs=74.5

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      ...+.+.+|+..+++++|||++++++.+.+ .+.++++||++. ++|.+.+.....                        
T Consensus        41 ~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~------------------------   95 (258)
T cd08215          41 KEREDALNEVKILKKLNHPNIIKYYESFEE-KGKLCIVMEYADGGDLSQKIKKQKK------------------------   95 (258)
T ss_pred             HHHHHHHHHHHHHHhcCCCChhheEEEEec-CCEEEEEEEecCCCcHHHHHHHhhc------------------------
Confidence            456778999999999999999999998775 579999999996 599999985421                        


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                             +...+++.++..++.||++|| .|||+..    .+-|++|.+
T Consensus        96 -------~~~~~~~~~~~~i~~~i~~~l-~~lh~~~~~H~dl~~~nil~  136 (258)
T cd08215          96 -------EGKPFPEEQILDWFVQLCLAL-KYLHSRKILHRDIKPQNIFL  136 (258)
T ss_pred             -------cCCCcCHHHHHHHHHHHHHHH-HHHHhCCEecccCChHHeEE
Confidence                   112689999999999999999 9999863    334777765

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.02  E-value=3.6e-09  Score=79.60  Aligned_cols=87  Identities=17%  Similarity=0.203  Sum_probs=72.3

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ..+.+.+|+.+|++++||||+++++.+.. .+..++++||+. ++|.+++....                          
T Consensus        40 ~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~l~~e~~~~~~L~~~~~~~~--------------------------   92 (253)
T cd05122          40 KKEKIINEIQILKKCKHPNIVKYYGSYLK-KDELWIVMEFCSGGSLKDLLKSTN--------------------------   92 (253)
T ss_pred             HHHHHHHHHHHHHhCCCCCEeEEEEEEec-CCeEEEEEecCCCCcHHHHHhhcC--------------------------
Confidence            55788999999999999999999997764 678999999997 79999987432                          


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                              ..+++.++..++.|+++|| .|||+..    .+-|++|++
T Consensus        93 --------~~~~~~~~~~i~~~i~~~l-~~lh~~~i~h~dl~p~ni~i  131 (253)
T cd05122          93 --------QTLTESQIAYVCKELLKGL-EYLHSNGIIHRDIKAANILL  131 (253)
T ss_pred             --------CCCCHHHHHHHHHHHHHHH-HHhhcCCEecCCCCHHHEEE
Confidence                    1588899999999999999 9999833    233777654

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.02  E-value=1.8e-09  Score=85.02  Aligned_cols=83  Identities=16%  Similarity=0.125  Sum_probs=67.2

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      ...+.+.+|+.+|++|+||||+++++.++. .+..++||||+. ++|....                             
T Consensus        41 ~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~~~~~~l~~~~-----------------------------   90 (279)
T cd06619          41 ELQKQIMSELEILYKCDSPYIIGFYGAFFV-ENRISICTEFMDGGSLDVYR-----------------------------   90 (279)
T ss_pred             HHHHHHHHHHHHHHhCCCCCeeeEEEEEEE-CCEEEEEEecCCCCChHHhh-----------------------------
Confidence            344678899999999999999999997764 678999999996 4664321                             


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                .+++..+..++.||+.|| +|||+..    .+-|++|.+
T Consensus        91 ----------~~~~~~~~~~~~qi~~~l-~~lH~~~i~H~dlkp~Nill  128 (279)
T cd06619          91 ----------KIPEHVLGRIAVAVVKGL-TYLWSLKILHRDVKPSNMLV  128 (279)
T ss_pred             ----------cCCHHHHHHHHHHHHHHH-HHHHHCCEeeCCCCHHHEEE
Confidence                      367788999999999999 9999865    445777765

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.02  E-value=1.4e-09  Score=84.98  Aligned_cols=85  Identities=16%  Similarity=0.154  Sum_probs=69.1

Q ss_pred             HHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          16 EILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASR   94 (138)
Q Consensus        16 e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (138)
                      +.+++|+++|++++||||++++..+++  +..++||||+. ++|.+++....                            
T Consensus        46 ~~~~~E~~~l~~l~~~~i~~~~~~~~~--~~~~lv~e~~~~~~L~~~~~~~~----------------------------   95 (262)
T cd05071          46 EAFLQEAQVMKKLRHEKLVQLYAVVSE--EPIYIVTEYMSKGSLLDFLKGEM----------------------------   95 (262)
T ss_pred             HHHHHHHHHHHhCCCCCcceEEEEECC--CCcEEEEEcCCCCcHHHHHhhcc----------------------------
Confidence            567999999999999999999986643  56899999996 69999997432                            


Q ss_pred             CcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          95 PTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        95 ~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                           ...+++..+..++.||++|| .|||+..    .+-|++|+.
T Consensus        96 -----~~~~~~~~~~~~~~~l~~aL-~~lH~~~i~H~dl~p~Nill  135 (262)
T cd05071          96 -----GKYLRLPQLVDMAAQIASGM-AYVERMNYVHRDLRAANILV  135 (262)
T ss_pred             -----ccCCCHHHHHHHHHHHHHHH-HHHHHCCccccccCcccEEE
Confidence                 11477888999999999999 9999855    344877764

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.02  E-value=1.7e-09  Score=87.74  Aligned_cols=83  Identities=14%  Similarity=0.071  Sum_probs=66.7

Q ss_pred             HHHHHHHHhhhC---CCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          17 ILRLGVKQLEVY---RHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        17 ~lrrEi~~L~rL---rHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ...+|..++.++   +||||+.+++.+++ .+.+|+||||+. ++|.+.+....                          
T Consensus        39 ~~~~e~~~l~~~~~~~~p~i~~~~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~--------------------------   91 (330)
T cd05586          39 HTIGERNILVRTLLDESPFIVGLKFSFQT-DSDLYLVTDYMSGGELFWHLQKEG--------------------------   91 (330)
T ss_pred             HHHHHHHHHHHhccCCCCcCcceEEEEec-CCeEEEEEcCCCCChHHHHHHhcC--------------------------
Confidence            344566777665   69999999997764 678999999995 69988887432                          


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                               .+++.+++.++.||++|| +|||+..    .+.|++|.+
T Consensus        92 ---------~~~~~~~~~~~~qil~al-~~LH~~~ivHrDlkp~Nili  129 (330)
T cd05586          92 ---------RFSEDRAKFYIAELVLAL-EHLHKYDIVYRDLKPENILL  129 (330)
T ss_pred             ---------CCCHHHHHHHHHHHHHHH-HHHHHCCeEeccCCHHHeEE
Confidence                     588999999999999999 9999865    345777765

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.02  E-value=1.8e-09  Score=83.87  Aligned_cols=86  Identities=14%  Similarity=0.139  Sum_probs=69.2

Q ss_pred             HHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSAS   93 (138)
Q Consensus        15 ~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (138)
                      .+.+++|+.+|++++||||+.++..+.  .+..+++|||+. ++|.+++.....                          
T Consensus        45 ~~~~~~E~~~l~~l~h~~i~~~~~~~~--~~~~~~v~e~~~~~~L~~~~~~~~~--------------------------   96 (260)
T cd05069          45 PEAFLQEAQIMKKLRHDKLVPLYAVVS--EEPIYIVTEFMGKGSLLDFLKEGDG--------------------------   96 (260)
T ss_pred             HHHHHHHHHHHHhCCCCCeeeEEEEEc--CCCcEEEEEcCCCCCHHHHHhhCCC--------------------------
Confidence            466789999999999999999998664  356899999996 599999974321                          


Q ss_pred             CCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          94 RPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        94 ~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                             ..+++..+..++.||++|| .|||+..    .+-|++|++
T Consensus        97 -------~~~~~~~~~~~~~~l~~al-~~lH~~~i~H~dl~~~Nill  135 (260)
T cd05069          97 -------KYLKLPQLVDMAAQIADGM-AYIERMNYIHRDLRAANILV  135 (260)
T ss_pred             -------CCCCHHHHHHHHHHHHHHH-HHHHhCCEeecccCcceEEE
Confidence                   1467788999999999999 9999765    334777764

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.02  E-value=2.7e-09  Score=86.59  Aligned_cols=104  Identities=14%  Similarity=0.119  Sum_probs=74.5

Q ss_pred             hHHHHHHHHHHHHhhhC-CCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVY-RHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPAN   89 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rL-rHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (138)
                      +...+.+.+|+.+|+++ +||||+++++.+.+ .+.++++|||+. ++|.++|.......            -.+.    
T Consensus        58 ~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~------------~~~~----  120 (334)
T cd05100          58 DKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ-DGPLYVLVEYASKGNLREYLRARRPPG------------MDYS----  120 (334)
T ss_pred             HHHHHHHHHHHHHHHhhcCCCCeeeeeEEEcc-CCceEEEEecCCCCcHHHHHHhcCCcc------------cccc----
Confidence            44567889999999999 89999999997764 568999999995 69999997532100            0000    


Q ss_pred             CCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          90 QSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        90 ~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                         .......+..++..++..++.||++|| .|||+..    .+.|+++.+
T Consensus       121 ---~~~~~~~~~~l~~~~~~~~~~qi~~al-~~LH~~givH~dlkp~Nill  167 (334)
T cd05100         121 ---FDTCKLPEEQLTFKDLVSCAYQVARGM-EYLASQKCIHRDLAARNVLV  167 (334)
T ss_pred             ---cccccCccccCCHHHHHHHHHHHHHHH-HHHHHCCeeccccccceEEE
Confidence               000001122477788889999999999 9999864    344887765

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.01  E-value=2.3e-09  Score=83.21  Aligned_cols=87  Identities=15%  Similarity=0.125  Sum_probs=69.5

Q ss_pred             HHHHHHHHHhhhC-CCCCeeEEeceeeec-----CCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          16 EILRLGVKQLEVY-RHPKILSVLHPIEEC-----PDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPA   88 (138)
Q Consensus        16 e~lrrEi~~L~rL-rHPnIL~l~e~~ee~-----~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (138)
                      +.+.+|+..|.++ +||||+++++.+.+.     .+.+|++|||+. ++|.+++.....                     
T Consensus        47 ~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~---------------------  105 (272)
T cd06637          47 EEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKG---------------------  105 (272)
T ss_pred             HHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEEEEEEcCCCCcHHHHHHhccC---------------------
Confidence            5678999999998 799999999977642     246999999996 699999975321                     


Q ss_pred             CCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          89 NQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        89 ~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                  ..+++..++.++.||+.|| .|||+..    .+-|+++..
T Consensus       106 ------------~~l~~~~~~~~~~qi~~~l-~~LH~~~ivh~dl~~~nili  144 (272)
T cd06637         106 ------------NTLKEEWIAYICREILRGL-SHLHQHKVIHRDIKGQNVLL  144 (272)
T ss_pred             ------------CCCCHHHHHHHHHHHHHHH-HHHHHCCCccCCCCHHHEEE
Confidence                        2588899999999999999 9999864    334666543

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>KOG0580|consensus

Probab=99.01  E-value=1.6e-10  Score=95.56  Aligned_cols=81  Identities=17%  Similarity=0.152  Sum_probs=70.5

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccc-cccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPV-YASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V-~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      ..+-.+||||+.+-..|||||||++|.-|.+ ...+|+++||. .|+|.+.|.....                       
T Consensus        63 ~~v~~qlrREiEIqs~L~hpnilrlY~~fhd-~~riyLilEya~~gel~k~L~~~~~-----------------------  118 (281)
T KOG0580|consen   63 TQVEHQLRREIEIQSHLRHPNILRLYGYFHD-SKRIYLILEYAPRGELYKDLQEGRM-----------------------  118 (281)
T ss_pred             hcchhhhhheeEeecccCCccHHhhhhheec-cceeEEEEEecCCchHHHHHHhccc-----------------------
Confidence            4556889999999999999999999998875 67999999998 4899999985431                       


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS  127 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a  127 (138)
                                ..|+|.....++.|++.|| .|||...
T Consensus       119 ----------~~f~e~~~a~Yi~q~A~Al-~y~h~k~  144 (281)
T KOG0580|consen  119 ----------KRFDEQRAATYIKQLANAL-LYCHLKR  144 (281)
T ss_pred             ----------ccccccchhHHHHHHHHHH-HHhccCC
Confidence                      2699999999999999999 9999854

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.01  E-value=8.4e-10  Score=90.24  Aligned_cols=87  Identities=14%  Similarity=0.128  Sum_probs=69.7

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeecC-------------CeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEECP-------------DALAFATEPVYASLASILAFQESPAPNHSTNPVTGG   80 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~-------------~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~   80 (138)
                      ..+.+.+|+.+|++++||||+++++.+.+..             ..+++||||+.++|.+.+..                
T Consensus        45 ~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~----------------  108 (342)
T cd07854          45 SVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGSLTELNSVYIVQEYMETDLANVLEQ----------------  108 (342)
T ss_pred             hHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccccccccceEEEEeecccccHHHHHHc----------------
Confidence            4467889999999999999999998665422             35899999998888887752                


Q ss_pred             CCCCCCCCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcceee
Q psy3822          81 SGSSPPPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAFC  137 (138)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~~  137 (138)
                                          ..+++..++.++.||++|| +|||+..    .+.|++|+++
T Consensus       109 --------------------~~l~~~~~~~~~~qi~~aL-~~LH~~givH~dikp~Nili~  148 (342)
T cd07854         109 --------------------GPLSEEHARLFMYQLLRGL-KYIHSANVLHRDLKPANVFIN  148 (342)
T ss_pred             --------------------CCCCHHHHHHHHHHHHHHH-HHHHhCCcccCCCCHHHEEEc
Confidence                                1478899999999999999 9999764    3347776653

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.01  E-value=9.1e-10  Score=88.03  Aligned_cols=86  Identities=17%  Similarity=0.170  Sum_probs=71.3

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      ...+.+.+|+..|.+++||||+++++.+++ .+..++||||+. ++|.+++...                          
T Consensus        61 ~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~--------------------------  113 (292)
T cd06658          61 QRRELLFNEVVIMRDYHHENVVDMYNSYLV-GDELWVVMEFLEGGALTDIVTHT--------------------------  113 (292)
T ss_pred             HHHHHHHHHHHHHHhCCCCcHHHHHHheec-CCeEEEEEeCCCCCcHHHHHhcC--------------------------
Confidence            445678999999999999999999997764 678999999995 5898887521                          


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                .+++.++..++.||+.|| .|||+..    .+-|+++++
T Consensus       114 ----------~l~~~~~~~~~~qi~~~l-~~LH~~~ivH~dlkp~Nill  151 (292)
T cd06658         114 ----------RMNEEQIATVCLSVLRAL-SYLHNQGVIHRDIKSDSILL  151 (292)
T ss_pred             ----------CCCHHHHHHHHHHHHHHH-HHHHHCCEeecCCCHHHEEE
Confidence                      478889999999999999 9999764    334777765

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>KOG0194|consensus

Probab=99.00  E-value=1.9e-09  Score=95.50  Aligned_cols=80  Identities=13%  Similarity=0.107  Sum_probs=67.4

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      ......+-+|+++|+.|+|||||++|+... ...-+++|||+|. |+|.++|++...                       
T Consensus       202 ~~~~~e~m~EArvMr~l~H~NVVr~yGVa~-~~~Pl~ivmEl~~gGsL~~~L~k~~~-----------------------  257 (474)
T KOG0194|consen  202 KEQIKEFMKEARVMRQLNHPNVVRFYGVAV-LEEPLMLVMELCNGGSLDDYLKKNKK-----------------------  257 (474)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-CCCccEEEEEecCCCcHHHHHHhCCC-----------------------
Confidence            344566689999999999999999999554 4568999999995 699999996541                       


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS  127 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a  127 (138)
                                 .++..|.-.++.|.+.|| +|||...
T Consensus       258 -----------~v~~~ek~~~~~~AA~Gl-~YLh~k~  282 (474)
T KOG0194|consen  258 -----------SLPTLEKLRFCYDAARGL-EYLHSKN  282 (474)
T ss_pred             -----------CCCHHHHHHHHHHHHhHH-HHHHHCC
Confidence                       477788899999999999 9999864

>KOG4250|consensus

Probab=99.00  E-value=7.4e-10  Score=101.49  Aligned_cols=87  Identities=21%  Similarity=0.214  Sum_probs=72.7

Q ss_pred             HHHHHHHHHHhhhCCCCCeeEEeceeeecCC------eEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVYRHPKILSVLHPIEECPD------ALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPP   87 (138)
Q Consensus        15 ~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~------~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~   87 (138)
                      .+.--+|+++|+||.|||||++++ ++|+..      .=.+|||||. |||.++|...++                    
T Consensus        55 ~e~~~~EieilkKLnh~NIVk~f~-iee~~~~~~~~~~~vlvmEyC~gGsL~~~L~~PEN--------------------  113 (732)
T KOG4250|consen   55 RERWCREIEILKKLNHPNIVKLFD-IEETKFLGLVTRLPVLVMEYCSGGSLRKVLNSPEN--------------------  113 (732)
T ss_pred             HHHHHHHHHHHHHcCchhhhhhcc-cCCccccCcccccceEEEeecCCCcHHHHhcCccc--------------------
Confidence            355678999999999999999999 666543      3578999995 799999987664                    


Q ss_pred             CCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcce
Q psy3822          88 ANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVA  135 (138)
Q Consensus        88 ~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~  135 (138)
                                  .+.|+|.|+...+..+..|| .|||++.    .+.|.++.
T Consensus       114 ------------~~GLpE~e~l~lL~d~~~al-~~LrEn~IvHRDlKP~NIv  152 (732)
T KOG4250|consen  114 ------------AYGLPESEFLDLLSDLVSAL-RHLRENGIVHRDLKPGNIV  152 (732)
T ss_pred             ------------ccCCCHHHHHHHHHHHHHHH-HHHHHcCceeccCCCCcEE
Confidence                        24799999999999999999 9999876    55677765

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.00  E-value=2.4e-09  Score=85.65  Aligned_cols=84  Identities=13%  Similarity=0.123  Sum_probs=70.5

Q ss_pred             HHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSAS   93 (138)
Q Consensus        15 ~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (138)
                      .+.+.+|+.+|++++||||+++++.+++ .+.+++||||+. ++|.+++.+.                            
T Consensus        60 ~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~----------------------------  110 (297)
T cd06656          60 KELIINEILVMRENKNPNIVNYLDSYLV-GDELWVVMEYLAGGSLTDVVTET----------------------------  110 (297)
T ss_pred             HHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEeecccCCCCHHHHHHhC----------------------------
Confidence            4678999999999999999999997764 678999999995 6999988632                            


Q ss_pred             CCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          94 RPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        94 ~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                              .+++.++..++.|++.|| .|||+..    .+-|++|.+
T Consensus       111 --------~~~~~~~~~~~~~l~~~L-~~LH~~~i~H~dL~p~Nili  148 (297)
T cd06656         111 --------CMDEGQIAAVCRECLQAL-DFLHSNQVIHRDIKSDNILL  148 (297)
T ss_pred             --------CCCHHHHHHHHHHHHHHH-HHHHHCCcccCCCCHHHEEE
Confidence                    467789999999999999 9999753    445777765

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.00  E-value=1.4e-09  Score=93.32  Aligned_cols=88  Identities=9%  Similarity=-0.021  Sum_probs=68.1

Q ss_pred             HHHHHHHHhhhCCCCCeeEEeceeee-------cCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          17 ILRLGVKQLEVYRHPKILSVLHPIEE-------CPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPAN   89 (138)
Q Consensus        17 ~lrrEi~~L~rLrHPnIL~l~e~~ee-------~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (138)
                      ...+|+.+|++|+||||+++++.+..       ....+++||||+.++|.+++....+.                     
T Consensus       105 ~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l~lvmE~~~~~l~~~~~~~~~~---------------------  163 (440)
T PTZ00036        105 YKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFLNVVMEFIPQTVHKYMKHYARN---------------------  163 (440)
T ss_pred             hHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceEEEEEEecCCccHHHHHHHHhhc---------------------
Confidence            34689999999999999999775431       12358899999999998888643211                     


Q ss_pred             CCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          90 QSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        90 ~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                ...+++..++.++.||+.|| +|||+..    .+.|++|.+
T Consensus       164 ----------~~~l~~~~~~~~~~qi~~gL-~yLH~~~IiHrDLKp~NILl  203 (440)
T PTZ00036        164 ----------NHALPLFLVKLYSYQLCRAL-AYIHSKFICHRDLKPQNLLI  203 (440)
T ss_pred             ----------CCCCCHHHHHHHHHHHHHHH-HHHHHCCEecCCcCHHHEEE
Confidence                      12588999999999999999 9999865    445777654

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.00  E-value=2.5e-09  Score=82.84  Aligned_cols=85  Identities=13%  Similarity=0.191  Sum_probs=69.0

Q ss_pred             HHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          16 EILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASR   94 (138)
Q Consensus        16 e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (138)
                      +.+.+|+.+|++++||||+++++.+.  .+.++++|||+. ++|.+++.....                           
T Consensus        46 ~~~~~E~~~l~~l~h~~i~~~~~~~~--~~~~~~v~e~~~~~~L~~~~~~~~~---------------------------   96 (260)
T cd05067          46 EAFLAEANLMKQLQHPRLVRLYAVVT--QEPIYIITEYMENGSLVDFLKTPEG---------------------------   96 (260)
T ss_pred             HHHHHHHHHHHhcCCcCeeeEEEEEc--cCCcEEEEEcCCCCCHHHHHHhcCC---------------------------
Confidence            56788999999999999999998653  467999999995 699999864321                           


Q ss_pred             CcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          95 PTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        95 ~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                            ..+++.++..++.||+.|| +|||+..    .+-|++|++
T Consensus        97 ------~~~~~~~~~~i~~~i~~al-~~LH~~~i~H~dl~p~ni~i  135 (260)
T cd05067          97 ------IKLTINKLIDMAAQIAEGM-AFIERKNYIHRDLRAANILV  135 (260)
T ss_pred             ------CCCCHHHHHHHHHHHHHHH-HHHhcCCeecccccHHhEEE
Confidence                  2577888999999999999 9999754    334777765

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.00  E-value=2.2e-09  Score=84.60  Aligned_cols=86  Identities=16%  Similarity=0.155  Sum_probs=70.5

Q ss_pred             HHHHHHHHHHHhhhCC-CCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYR-HPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLr-HPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      ..+.+++|+.+|.+++ ||||+.++..++. .+.+|+||||+. ++|.+.+....                         
T Consensus        47 ~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~-------------------------  100 (290)
T cd05613          47 TTEHTRTERQVLEHIRQSPFLVTLHYAFQT-DTKLHLILDYINGGELFTHLSQRE-------------------------  100 (290)
T ss_pred             HHHHHHHHHHHHHhcccCCChhceeeEeec-CCeEEEEEecCCCCcHHHHHHHcC-------------------------
Confidence            4467789999999995 9999999997764 678999999996 69999987432                         


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                .+++.+++.++.||++|| .|||+..    .+-|++|.+
T Consensus       101 ----------~l~~~~~~~~~~qi~~al-~~lH~~~i~H~dl~p~nil~  138 (290)
T cd05613         101 ----------RFKEQEVQIYSGEIVLAL-EHLHKLGIIYRDIKLENILL  138 (290)
T ss_pred             ----------CCCHHHHHHHHHHHHHHH-HHHHhCCeeccCCCHHHeEE
Confidence                      477889999999999999 9999754    334777665

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.00  E-value=2e-09  Score=85.86  Aligned_cols=84  Identities=14%  Similarity=0.141  Sum_probs=70.1

Q ss_pred             HHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSAS   93 (138)
Q Consensus        15 ~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (138)
                      .+.+.+|+.+|++++||||+++++.+.. .+..|+|+||+. ++|.+++.+.                            
T Consensus        60 ~~~~~~e~~~l~~l~hp~i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~----------------------------  110 (293)
T cd06647          60 KELIINEILVMRENKHPNIVNYLDSYLV-GDELWVVMEYLAGGSLTDVVTET----------------------------  110 (293)
T ss_pred             HHHHHHHHHHHhhcCCCCeeehhheeee-CCcEEEEEecCCCCcHHHHHhhc----------------------------
Confidence            4678899999999999999999998875 568999999995 6999988632                            


Q ss_pred             CCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          94 RPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        94 ~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                              .+++.++..++.||+.|| .|||+..    .+-|++|++
T Consensus       111 --------~l~~~~~~~i~~~l~~al-~~LH~~gi~H~dL~p~Nili  148 (293)
T cd06647         111 --------CMDEGQIAAVCRECLQAL-EFLHSNQVIHRDIKSDNILL  148 (293)
T ss_pred             --------CCCHHHHHHHHHHHHHHH-HHHHhCCEeeccCCHHHEEE
Confidence                    467789999999999999 9999764    344776654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.00  E-value=3e-09  Score=82.25  Aligned_cols=82  Identities=13%  Similarity=0.052  Sum_probs=64.4

Q ss_pred             HHHHHHHh-hhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          18 LRLGVKQL-EVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASRP   95 (138)
Q Consensus        18 lrrEi~~L-~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   95 (138)
                      +..|...+ ..+.||||+++++.+++ ++.+|+||||+. ++|.+++....                             
T Consensus        43 ~~~e~~~~~~~~~~~~i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~-----------------------------   92 (260)
T cd05611          43 VKAERAIMMIQGESPYVAKLYYSFQS-KDYLYLVMEYLNGGDCASLIKTLG-----------------------------   92 (260)
T ss_pred             HHHHHHHHhhcCCCCCeeeeeeeEEc-CCeEEEEEeccCCCCHHHHHHHcC-----------------------------
Confidence            34554444 45689999999998764 679999999995 69999997432                             


Q ss_pred             cccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          96 THAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        96 ~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                            .+++.+++.++.||++|| .|||+..    .+-|+++++
T Consensus        93 ------~~~~~~~~~i~~qi~~aL-~~lH~~~i~H~dl~p~nil~  130 (260)
T cd05611          93 ------GLPEDWAKQYIAEVVLGV-EDLHQRGIIHRDIKPENLLI  130 (260)
T ss_pred             ------CCCHHHHHHHHHHHHHHH-HHHHHCCeecCCCCHHHeEE
Confidence                  478899999999999999 9999854    334777654

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=98.99  E-value=2.9e-09  Score=84.47  Aligned_cols=85  Identities=19%  Similarity=0.215  Sum_probs=71.8

Q ss_pred             HHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSAS   93 (138)
Q Consensus        15 ~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (138)
                      .+.+.+|+.+|.+++||||+++++.+. ..+..++++||+. ++|.+++...                            
T Consensus        60 ~~~~~~e~~~l~~~~h~~vv~~~~~~~-~~~~~~~v~e~~~~~~L~~~~~~~----------------------------  110 (285)
T cd06648          60 RELLFNEVVIMRDYQHPNIVEMYSSYL-VGDELWVVMEFLEGGALTDIVTHT----------------------------  110 (285)
T ss_pred             HHHHHHHHHHHHHcCCCChheEEEEEE-cCCeEEEEEeccCCCCHHHHHHhC----------------------------
Confidence            356789999999999999999999776 4678999999995 6999988741                            


Q ss_pred             CCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcceee
Q psy3822          94 RPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAFC  137 (138)
Q Consensus        94 ~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~~  137 (138)
                              .+++.++..++.||+.|| .|||+..    .+-|++|.++
T Consensus       111 --------~~~~~~~~~~~~ql~~~l-~~lH~~~i~H~dl~p~Nil~~  149 (285)
T cd06648         111 --------RMNEEQIATVCLAVLKAL-SFLHAQGVIHRDIKSDSILLT  149 (285)
T ss_pred             --------CCCHHHHHHHHHHHHHHH-HHHHhCCeecCCCChhhEEEc
Confidence                    478889999999999999 9999854    4458888764

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>KOG0616|consensus

Probab=98.99  E-value=1.8e-09  Score=91.63  Aligned_cols=84  Identities=18%  Similarity=0.202  Sum_probs=72.4

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      .++.+.+|..+|+.+.||+++.++..+.+ .+.+|+|||||. |.|+++|++.+                          
T Consensus        87 QveH~~nEk~vL~~v~~PFlv~l~~t~~d-~~~lymvmeyv~GGElFS~Lrk~~--------------------------  139 (355)
T KOG0616|consen   87 QVEHTHNEKRVLKAVSHPFLVKLYGTFKD-NSNLYMVMEYVPGGELFSYLRKSG--------------------------  139 (355)
T ss_pred             HHHHHhhHHHHHhhccCceeEEEEEeecc-CCeEEEEEeccCCccHHHHHHhcC--------------------------
Confidence            45778899999999999999999998874 679999999995 79999998643                          


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcc
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSV  134 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~  134 (138)
                               +|+|..++.+..||+.|| +|||...    .+.|.++
T Consensus       140 ---------rF~e~~arFYAAeivlAl-eylH~~~iiYRDLKPENi  175 (355)
T KOG0616|consen  140 ---------RFSEPHARFYAAEIVLAL-EYLHSLDIIYRDLKPENL  175 (355)
T ss_pred             ---------CCCchhHHHHHHHHHHHH-HHHHhcCeeeccCChHHe
Confidence                     699999999999999999 9999875    3445544

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=98.99  E-value=3.2e-09  Score=83.17  Aligned_cols=88  Identities=16%  Similarity=0.143  Sum_probs=69.7

Q ss_pred             HHHHHHHHHHhhhC-CCCCeeEEeceeee-----cCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVY-RHPKILSVLHPIEE-----CPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPP   87 (138)
Q Consensus        15 ~e~lrrEi~~L~rL-rHPnIL~l~e~~ee-----~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~   87 (138)
                      ...+++|+.+++++ +||||+++++.+..     ..+.++++|||+. ++|.+++.....                    
T Consensus        56 ~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~--------------------  115 (282)
T cd06636          56 EEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKG--------------------  115 (282)
T ss_pred             HHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEEEEEEEeCCCCcHHHHHHHccC--------------------
Confidence            35678999999999 69999999987642     2468999999996 599999974321                    


Q ss_pred             CCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          88 ANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        88 ~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                   ..+++..++.++.||++|| .|||+..    .+-|+++.+
T Consensus       116 -------------~~~~~~~~~~~~~qi~~al-~~LH~~~ivH~dl~~~nili  154 (282)
T cd06636         116 -------------NALKEDWIAYICREILRGL-AHLHAHKVIHRDIKGQNVLL  154 (282)
T ss_pred             -------------CCCCHHHHHHHHHHHHHHH-HHHHHCCcccCCCCHHHEEE
Confidence                         2478888999999999999 9999864    334666654

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=98.98  E-value=4e-09  Score=82.07  Aligned_cols=90  Identities=20%  Similarity=0.185  Sum_probs=70.3

Q ss_pred             hHHHHHHHHHHHHhhhC---CCCCeeEEeceeeecCCe-----EEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVY---RHPKILSVLHPIEECPDA-----LAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGS   83 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rL---rHPnIL~l~e~~ee~~~~-----L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~   83 (138)
                      +.+...+.+|+.++.++   .||||+++++.+.+ .+.     ++++||++.++|.+++.....                
T Consensus        39 ~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~-~~~~~~~~~~l~~e~~~~~l~~~l~~~~~----------------  101 (287)
T cd07838          39 EGIPLSTLREIALLKQLESFEHPNIVRLLDVCHG-PRTDRELKLTLVFEHVDQDLATYLSKCPK----------------  101 (287)
T ss_pred             chhhhhHHHHHHHHHHhhccCCCCcceEEEEEee-ccCCCCceeEEEehhcccCHHHHHHHccC----------------
Confidence            34445667888888776   59999999998775 344     999999998899998874321                


Q ss_pred             CCCCCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          84 SPPPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                       ..+++.++..++.||++|| +|||+..    .+-|++|.+
T Consensus       102 -----------------~~l~~~~~~~~~~~i~~al-~~LH~~~i~h~~l~~~nili  140 (287)
T cd07838         102 -----------------PGLPPETIKDLMRQLLRGV-DFLHSHRIVHRDLKPQNILV  140 (287)
T ss_pred             -----------------CCCCHHHHHHHHHHHHHHH-HHHHHCCeeeccCChhhEEE
Confidence                             1588899999999999999 9999864    334777654

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>KOG1026|consensus

Probab=98.98  E-value=3.2e-09  Score=98.35  Aligned_cols=95  Identities=19%  Similarity=0.187  Sum_probs=72.3

Q ss_pred             CcchHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCC
Q psy3822           9 KRKETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPP   87 (138)
Q Consensus         9 ~~~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~   87 (138)
                      ...+..-+.++||+.+|+.|.|||||++++..-+ ++.+++|.||+. |||..+|.......        .       ..
T Consensus       527 ~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~-~~P~~MvFEYm~~GDL~eFLra~sP~a--------~-------~~  590 (774)
T KOG1026|consen  527 KAENQARQDFRREAELLAELQHPNIVRLLGVCRE-GDPLCMVFEYMDHGDLHEFLRARSPKA--------D-------KL  590 (774)
T ss_pred             cccHHHHHHHHHHHHHHHhccCCCeEEEEEEEcc-CCeeEEEEEecccccHHHHHHhhCCcc--------c-------cc
Confidence            4445577888999999999999999999998776 678999999995 89999998543110        0       01


Q ss_pred             CCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCC
Q psy3822          88 ANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVP  126 (138)
Q Consensus        88 ~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~  126 (138)
                      +.++.     . ..+|+..+.-++..||+.|+ +||-++
T Consensus       591 ~~g~~-----~-~~~L~~~q~L~iA~QIAaGM-~YLs~~  622 (774)
T KOG1026|consen  591 ASGQD-----T-PPPLSTSQFLHIATQIAAGM-EYLSSH  622 (774)
T ss_pred             cCCCC-----C-CCCCCHHHHHHHHHHHHHHH-HHHHhC
Confidence            01100     0 23699999999999999999 998653

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=98.98  E-value=4.9e-09  Score=81.37  Aligned_cols=95  Identities=11%  Similarity=0.069  Sum_probs=71.3

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeec-----CCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEEC-----PDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSP   85 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~-----~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~   85 (138)
                      +...+.+.+|+.+|++++||||++++....+.     ....+++|||+. ++|.+.+.......                
T Consensus        41 ~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~----------------  104 (272)
T cd05075          41 RSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGD----------------  104 (272)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCcEEEEEeCCCCcHHHHHHHhcccC----------------
Confidence            44467889999999999999999999754321     135899999995 79999886432110                


Q ss_pred             CCCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          86 PPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        86 ~~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                   +...+++..+..++.||++|| +|||+..    .+.|+++.+
T Consensus       105 -------------~~~~~~~~~~~~~~~~i~~~l-~~lH~~~i~H~dlkp~Nil~  145 (272)
T cd05075         105 -------------CPQYLPTQMLVKFMTDIASGM-EYLSSKSFIHRDLAARNCML  145 (272)
T ss_pred             -------------CcccCCHHHHHHHHHHHHHHH-HHHHHCCeeccccchhheEE
Confidence                         012588899999999999999 9999854    344777764

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=98.98  E-value=5.9e-09  Score=80.96  Aligned_cols=94  Identities=17%  Similarity=0.207  Sum_probs=72.6

Q ss_pred             cchHHHHHHHHHHHHhhh-CCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          10 RKETVTEILRLGVKQLEV-YRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPP   87 (138)
Q Consensus        10 ~~e~~~e~lrrEi~~L~r-LrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~   87 (138)
                      .++..+..+.+|+..+.+ ++||||+++++.+++ .+.++++|||+. ++|.+++.....                    
T Consensus        47 ~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~l~~~l~~~~~--------------------  105 (269)
T cd08528          47 ERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE-NDRLYIVMDLIEGAPLGEHFNSLKE--------------------  105 (269)
T ss_pred             cchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc-CCeEEEEEecCCCCcHHHHHHHHHh--------------------
Confidence            345566677889998875 799999999997765 678999999996 699999864221                    


Q ss_pred             CCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCCCc-----ccCccee
Q psy3822          88 ANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPSTY-----LPSSVAF  136 (138)
Q Consensus        88 ~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a~~-----~~~~~~~  136 (138)
                                 ....+++..++..+.||+.|| .|||+..++     -|++|.+
T Consensus       106 -----------~~~~~~~~~~~~~~~~l~~~l-~~lh~~~~i~H~dl~~~nil~  147 (269)
T cd08528         106 -----------KKQRFTEERIWNIFVQMVLAL-RYLHKEKRIVHRDLTPNNIML  147 (269)
T ss_pred             -----------ccCCCCHHHHHHHHHHHHHHH-HHhccCCceeecCCCHHHEEE
Confidence                       112588899999999999999 999974443     3666654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=98.97  E-value=2e-09  Score=84.74  Aligned_cols=88  Identities=18%  Similarity=0.172  Sum_probs=71.3

Q ss_pred             HHHHHHHHHHHHhhhCC-CCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYR-HPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLr-HPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      ...+.+.+|+..|.+++ ||||+.+.+.++ +.+.+++||||+. ++|.+.+....                        
T Consensus        46 ~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~------------------------  100 (288)
T cd05583          46 KTAEHTRTERQVLEAVRRCPFLVTLHYAFQ-TDTKLHLILDYVNGGELFTHLYQRE------------------------  100 (288)
T ss_pred             hHHHHHHHHHHHHHhccCCcchhhhheeee-cCCEEEEEEecCCCCcHHHHHhhcC------------------------
Confidence            34567789999999995 999999999776 4678999999995 69988886321                        


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcceee
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAFC  137 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~~  137 (138)
                                 .+++.+++.++.|+++|| .|||+..    .+-|++|+++
T Consensus       101 -----------~~~~~~~~~~~~ql~~~l-~~lH~~~~~H~dl~p~nil~~  139 (288)
T cd05583         101 -----------HFTESEVRVYIAEIVLAL-DHLHQLGIIYRDIKLENILLD  139 (288)
T ss_pred             -----------CcCHHHHHHHHHHHHHHH-HHHHHCCeeccCCCHHHeEEC
Confidence                       578899999999999999 9999743    3347777653

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=98.97  E-value=4.7e-09  Score=85.05  Aligned_cols=87  Identities=15%  Similarity=0.117  Sum_probs=69.3

Q ss_pred             HHHHHHHHHHHHhhhCCCCC-eeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPK-ILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPn-IL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      ...+.+.+|+.+|.+++||+ |+.+++.++ +.+.+|+||||+. ++|.+.+....                        
T Consensus        42 ~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~-~~~~~~lv~E~~~~g~L~~~~~~~~------------------------   96 (324)
T cd05587          42 DDVECTMVEKRVLALPGKPPFLTQLHSCFQ-TMDRLYFVMEYVNGGDLMYHIQQVG------------------------   96 (324)
T ss_pred             hHHHHHHHHHHHHHhcCCCCceeeeEEEEE-cCCEEEEEEcCCCCCcHHHHHHHcC------------------------
Confidence            34567789999999998765 777877665 4779999999995 79998886432                        


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                 .+++.++..++.||++|| +|||+..    .+.|++|.+
T Consensus        97 -----------~~~~~~~~~~~~qi~~al-~~lH~~~ivH~dlkp~Nill  134 (324)
T cd05587          97 -----------KFKEPHAVFYAAEIAIGL-FFLHSKGIIYRDLKLDNVML  134 (324)
T ss_pred             -----------CCCHHHHHHHHHHHHHHH-HHHHHCCeEecCCCHHHeEE
Confidence                       578889999999999999 9999864    344777654

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=98.96  E-value=3.5e-09  Score=86.76  Aligned_cols=53  Identities=17%  Similarity=0.130  Sum_probs=44.4

Q ss_pred             HHHHHHHHHHHHhhhC-CCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhc
Q psy3822          13 TVTEILRLGVKQLEVY-RHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQ   65 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rL-rHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~   65 (138)
                      ...+.+.+|+.+|.+| +||||+++++.+.+....++++|||+. ++|.+++...
T Consensus        52 ~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv~ey~~~g~L~~~i~~~  106 (343)
T cd05103          52 SEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSNYLRSK  106 (343)
T ss_pred             HHHHHHHHHHHHHHhccCCccHhhhcceeecCCCceEEEEeccCCCcHHHHHHhc
Confidence            3456788999999999 689999999977655567999999995 7999999753

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=98.96  E-value=4.9e-09  Score=82.66  Aligned_cols=91  Identities=12%  Similarity=0.043  Sum_probs=71.5

Q ss_pred             HHHHHHHHHHHhhhC-CCCCeeEEeceeeecC----CeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVY-RHPKILSVLHPIEECP----DALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPP   87 (138)
Q Consensus        14 ~~e~lrrEi~~L~rL-rHPnIL~l~e~~ee~~----~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~   87 (138)
                      ..+.+.+|+.++.+| +||||+++++.+.+..    +.+++||||+. ++|.+++.....                    
T Consensus        61 ~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~--------------------  120 (291)
T cd06639          61 VDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLI--------------------  120 (291)
T ss_pred             HHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCeeEEEEEECCCCcHHHHHHHhhh--------------------
Confidence            346778999999999 7999999999776432    36999999995 699999874321                    


Q ss_pred             CCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          88 ANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        88 ~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                 ....+++..++.++.||+.|| +|||+..    .+-|++|++
T Consensus       121 -----------~~~~~~~~~~~~~~~qi~~al-~~lH~~~ivH~dlkp~nili  161 (291)
T cd06639         121 -----------CGQRLDEAMISYILYGALLGL-QHLHNNRIIHRDVKGNNILL  161 (291)
T ss_pred             -----------cCCCCCHHHHHHHHHHHHHHH-HHHHhCCeeccCCCHHHEEE
Confidence                       012588899999999999999 9999854    345777765

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=98.94  E-value=4.4e-09  Score=84.24  Aligned_cols=87  Identities=16%  Similarity=0.141  Sum_probs=71.3

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      ...+.+.+|+..|.+++||||+++++.+++ .+..+++|||+. ++|.+++...                          
T Consensus        59 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~--------------------------  111 (292)
T cd06657          59 QRRELLFNEVVIMRDYQHENVVEMYNSYLV-GDELWVVMEFLEGGALTDIVTHT--------------------------  111 (292)
T ss_pred             hHHHHHHHHHHHHHhcCCcchhheeeEEEe-CCEEEEEEecCCCCcHHHHHhcC--------------------------
Confidence            345678999999999999999999997764 679999999995 5898877521                          


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcceee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAFC  137 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~~  137 (138)
                                .+++..+..++.||+.|| +|||+..    .+-|++++++
T Consensus       112 ----------~~~~~~~~~~~~ql~~~l-~~lH~~givH~dl~p~Nilv~  150 (292)
T cd06657         112 ----------RMNEEQIAAVCLAVLKAL-SVLHAQGVIHRDIKSDSILLT  150 (292)
T ss_pred             ----------CCCHHHHHHHHHHHHHHH-HHHHHCCeecCCCCHHHEEEC
Confidence                      478889999999999999 9999854    3447777653

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=98.93  E-value=1.9e-09  Score=88.12  Aligned_cols=87  Identities=18%  Similarity=0.234  Sum_probs=69.8

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecC-----CeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECP-----DALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPP   87 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~-----~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~   87 (138)
                      ...+.+.+|+.+|++++||||+++.+.+....     ..+++||||+.++|.+++...                      
T Consensus        56 ~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~----------------------  113 (343)
T cd07851          56 IHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQDVYLVTHLMGADLNNIVKCQ----------------------  113 (343)
T ss_pred             hHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccccccEEEEEecCCCCHHHHHhcC----------------------
Confidence            34566788999999999999999988665322     249999999988999988631                      


Q ss_pred             CCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          88 ANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        88 ~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                    .+++.+++.++.||++|| +|||+..    .+.|++|.+
T Consensus       114 --------------~l~~~~~~~~~~ql~~aL-~~LH~~gi~H~dlkp~Nill  151 (343)
T cd07851         114 --------------KLSDDHIQFLVYQILRGL-KYIHSAGIIHRDLKPSNIAV  151 (343)
T ss_pred             --------------CCCHHHHHHHHHHHHHHH-HHHHHCCeecCCCCHHHeEE
Confidence                          588999999999999999 9999854    334776654

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=98.93  E-value=7.7e-09  Score=81.11  Aligned_cols=90  Identities=9%  Similarity=0.019  Sum_probs=71.5

Q ss_pred             cchHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          10 RKETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPA   88 (138)
Q Consensus        10 ~~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (138)
                      ......+.+.+|+.+|.++.||||+.+++...  ....+++||++. ++|.+.+....                      
T Consensus        48 ~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~--~~~~~l~~~~~~~g~l~~~l~~~~----------------------  103 (279)
T cd05109          48 TSPKANKEILDEAYVMAGVGSPYVCRLLGICL--TSTVQLVTQLMPYGCLLDYVRENK----------------------  103 (279)
T ss_pred             CCHHHHHHHHHHHHHHHhcCCCCCceEEEEEc--CCCcEEEEEcCCCCCHHHHHhhcc----------------------
Confidence            33445577899999999999999999998654  346889999984 79999987432                      


Q ss_pred             CCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          89 NQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        89 ~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                  ..+++.++..++.||+.|| +|||+..    .+.|+++.+
T Consensus       104 ------------~~~~~~~~~~~~~qi~~~L-~~lH~~~iiH~dlkp~Nil~  142 (279)
T cd05109         104 ------------DRIGSQDLLNWCVQIAKGM-SYLEEVRLVHRDLAARNVLV  142 (279)
T ss_pred             ------------CCCCHHHHHHHHHHHHHHH-HHHHHCCeeccccccceEEE
Confidence                        1578889999999999999 9999865    344777654

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=98.93  E-value=6.5e-09  Score=83.15  Aligned_cols=85  Identities=11%  Similarity=0.049  Sum_probs=68.4

Q ss_pred             HHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSAS   93 (138)
Q Consensus        15 ~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (138)
                      ...+++|+.++++++||||+++++.+.+  ...++++||+. ++|.+++....                           
T Consensus        53 ~~~~~~e~~~~~~l~h~niv~~~~~~~~--~~~~~v~e~~~~g~l~~~~~~~~---------------------------  103 (303)
T cd05110          53 NVEFMDEALIMASMDHPHLVRLLGVCLS--PTIQLVTQLMPHGCLLDYVHEHK---------------------------  103 (303)
T ss_pred             HHHHHHHHHHHHhCCCCCcccEEEEEcC--CCceeeehhcCCCCHHHHHHhcc---------------------------
Confidence            3467899999999999999999996653  35789999995 79999987432                           


Q ss_pred             CCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          94 RPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        94 ~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                             ..+++..+..++.||+.|| .|||+..    .+.|+++..
T Consensus       104 -------~~~~~~~~~~~~~qi~~~L-~~LH~~~ivH~dikp~Nill  142 (303)
T cd05110         104 -------DNIGSQLLLNWCVQIAKGM-MYLEERRLVHRDLAARNVLV  142 (303)
T ss_pred             -------cCCCHHHHHHHHHHHHHHH-HHHhhcCeeccccccceeee
Confidence                   1477888999999999999 9999865    345777654

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=98.93  E-value=5.9e-09  Score=81.91  Aligned_cols=92  Identities=11%  Similarity=0.023  Sum_probs=70.8

Q ss_pred             HHHHHHHHHHHHhhhCC-CCCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYR-HPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLr-HPnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      .....+.+|+..|.++. ||||+++++.+.. .+..+++||++..+|.++.......                       
T Consensus        44 ~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~-~~~~~~~~e~~~~~l~~l~~~~~~~-----------------------   99 (288)
T cd06616          44 KEQKRLLMDLDVVMRSSDCPYIVKFYGALFR-EGDCWICMELMDISLDKFYKYVYEV-----------------------   99 (288)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCEeeeeeEEec-CCcEEEEEecccCCHHHHHHHHHHh-----------------------
Confidence            34466789999999997 9999999997764 6689999999988877765421100                       


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCCC-----cccCccee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPST-----YLPSSVAF  136 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a~-----~~~~~~~~  136 (138)
                             ....+++..++.++.|+++|| +|||+..+     +-|++|++
T Consensus       100 -------~~~~l~~~~~~~i~~~i~~~l-~~lh~~~~i~H~dlkp~Nil~  141 (288)
T cd06616         100 -------LKSVIPEEILGKIAVATVKAL-NYLKEELKIIHRDVKPSNILL  141 (288)
T ss_pred             -------hcCCCCHHHHHHHHHHHHHHH-HHHhhcCCeeccCCCHHHEEE
Confidence                   012589999999999999999 99997543     44777765

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>KOG4236|consensus

Probab=98.92  E-value=4.9e-09  Score=95.03  Aligned_cols=96  Identities=23%  Similarity=0.300  Sum_probs=75.7

Q ss_pred             ccccCCCCcchHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCC
Q psy3822           2 AEKLHKPKRKETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGS   81 (138)
Q Consensus         2 ~~k~~K~~~~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~   81 (138)
                      .||+.=+..+|   +.||.|+.+|++|+||.||.+..-+ ||++.++.|||-.-|+.-..+-..+.              
T Consensus       597 IdKlrFp~kqe---sqlR~EVaILq~l~HPGiV~le~M~-ET~ervFVVMEKl~GDMLEMILSsEk--------------  658 (888)
T KOG4236|consen  597 IDKLRFPTKQE---SQLRNEVAILQNLHHPGIVNLECMF-ETPERVFVVMEKLHGDMLEMILSSEK--------------  658 (888)
T ss_pred             eecccCCCchH---HHHHHHHHHHHhcCCCCeeEEEEee-cCCceEEEEehhhcchHHHHHHHhhc--------------
Confidence            34554433333   8899999999999999999999955 58999999999998766666543331              


Q ss_pred             CCCCCCCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcC----CCCcccCcce
Q psy3822          82 GSSPPPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYV----PSTYLPSSVA  135 (138)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~----~a~~~~~~~~  135 (138)
                                         .+|+|.-.|..+.||+.|| .|||-    +..+.|.+|.
T Consensus       659 -------------------gRL~er~TkFlvtQIL~AL-r~LH~knIvHCDLKPENVL  696 (888)
T KOG4236|consen  659 -------------------GRLPERITKFLVTQILVAL-RYLHFKNIVHCDLKPENVL  696 (888)
T ss_pred             -------------------ccchHHHHHHHHHHHHHHH-HHhhhcceeeccCCchhee
Confidence                               2799999999999999999 99996    3477787764

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=98.92  E-value=3.6e-09  Score=82.58  Aligned_cols=84  Identities=19%  Similarity=0.186  Sum_probs=69.6

Q ss_pred             HHHHHHHhhhCC-CCCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q psy3822          18 LRLGVKQLEVYR-HPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASRPT   96 (138)
Q Consensus        18 lrrEi~~L~rLr-HPnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   96 (138)
                      ..+|+..|.+++ ||||+++++.+++ .+.+++||||+.++|.+.+....                              
T Consensus        44 ~~~e~~~l~~~~~h~~i~~~~~~~~~-~~~~~lv~e~~~~~l~~~~~~~~------------------------------   92 (283)
T cd07830          44 NLREVKSLRKLNEHPNIVKLKEVFRE-NDELYFVFEYMEGNLYQLMKDRK------------------------------   92 (283)
T ss_pred             HHHHHHHHHhccCCCCchhHHHHhhc-CCcEEEEEecCCCCHHHHHHhcc------------------------------
Confidence            357999999999 9999999998775 77899999999889999887432                              


Q ss_pred             ccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          97 HAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        97 ~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                         ...+++.++..++.||++|| .|||++.    .+-|++|++
T Consensus        93 ---~~~~~~~~~~~~~~~l~~~l-~~Lh~~~i~H~dl~~~ni~i  132 (283)
T cd07830          93 ---GKPFSESVIRSIIYQILQGL-AHIHKHGFFHRDLKPENLLV  132 (283)
T ss_pred             ---cccCCHHHHHHHHHHHHHHH-HHHHHCCcccCCCChhhEEE
Confidence               12578899999999999999 9999864    334777665

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=98.91  E-value=9.2e-09  Score=83.32  Aligned_cols=86  Identities=15%  Similarity=0.121  Sum_probs=68.5

Q ss_pred             HHHHHHHHHHHhhhC-CCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVY-RHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        14 ~~e~lrrEi~~L~rL-rHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      ..+...+|..+|.++ +||+|++++..++ +.+.+|+||||+. ++|.+.+....                         
T Consensus        43 ~~~~~~~e~~~l~~~~~~~~i~~~~~~~~-~~~~~~lv~E~~~~g~L~~~~~~~~-------------------------   96 (323)
T cd05616          43 DVECTMVEKRVLALSGKPPFLTQLHSCFQ-TMDRLYFVMEYVNGGDLMYQIQQVG-------------------------   96 (323)
T ss_pred             HHHHHHHHHHHHHhccCCCeEeeEEEEEe-cCCEEEEEEcCCCCCCHHHHHHHcC-------------------------
Confidence            345667788888887 5889999998776 4679999999995 79998886432                         


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                .+++.++..++.||+.|| +|||+..    .+.|++|.+
T Consensus        97 ----------~~~~~~~~~~~~qi~~aL-~~LH~~~ivHrDlkp~Nill  134 (323)
T cd05616          97 ----------RFKEPHAVFYAAEIAIGL-FFLHSKGIIYRDLKLDNVML  134 (323)
T ss_pred             ----------CCCHHHHHHHHHHHHHHH-HHHHHCCEEecCCCHHHeEE
Confidence                      578899999999999999 9999754    345777654

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=98.91  E-value=4.7e-09  Score=85.84  Aligned_cols=88  Identities=14%  Similarity=0.198  Sum_probs=68.9

Q ss_pred             chHHHHHHHHHHHHhhhCCCCCeeEEeceeeecC-----CeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCC
Q psy3822          11 KETVTEILRLGVKQLEVYRHPKILSVLHPIEECP-----DALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSP   85 (138)
Q Consensus        11 ~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~-----~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~   85 (138)
                      .+...+.+.+|+..|++++||||+++++.+++..     ...++||||+..+|.+++.                      
T Consensus        54 ~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~----------------------  111 (342)
T cd07879          54 SEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQDFYLVMPYMQTDLQKIMG----------------------  111 (342)
T ss_pred             cccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCceEEEEecccccCHHHHHc----------------------
Confidence            3445567889999999999999999999776432     2479999999877766542                      


Q ss_pred             CCCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          86 PPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        86 ~~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                     ..+++.+++.++.||++|| .|||+..    .+.|++|++
T Consensus       112 ---------------~~~~~~~~~~~~~qi~~aL-~~LH~~~i~H~dlkp~NIll  150 (342)
T cd07879         112 ---------------HPLSEDKVQYLVYQMLCGL-KYIHSAGIIHRDLKPGNLAV  150 (342)
T ss_pred             ---------------CCCCHHHHHHHHHHHHHHH-HHHHHCCcccCCCCHHHEEE
Confidence                           1478889999999999999 9999865    334777654

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>KOG1989|consensus

Probab=98.90  E-value=3.6e-09  Score=97.78  Aligned_cols=83  Identities=11%  Similarity=0.051  Sum_probs=69.5

Q ss_pred             chHHHHHHHHHHHHhhhCC-CCCeeEEeceeeec------CCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCC
Q psy3822          11 KETVTEILRLGVKQLEVYR-HPKILSVLHPIEEC------PDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSG   82 (138)
Q Consensus        11 ~e~~~e~lrrEi~~L~rLr-HPnIL~l~e~~ee~------~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~   82 (138)
                      .+.-++.+++||.+|++|+ |||||+++++-...      ...+.+.||||. ++|-|+|..+..               
T Consensus        74 de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq---------------  138 (738)
T KOG1989|consen   74 DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQ---------------  138 (738)
T ss_pred             CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEEEeehhhccCCcHHHHHHHHHh---------------
Confidence            4678899999999999999 99999999932211      125899999997 799999985432               


Q ss_pred             CCCCCCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC
Q psy3822          83 SSPPPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS  127 (138)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a  127 (138)
                                        .+|+|.||-+++.|+++|+ .+||.-.
T Consensus       139 ------------------~~lte~eVLkIf~dv~~AV-a~mH~~~  164 (738)
T KOG1989|consen  139 ------------------TRLTEDEVLKIFYDVCEAV-AAMHYLK  164 (738)
T ss_pred             ------------------ccCChHHHHHHHHHHHHHH-HHHhcCC
Confidence                              2599999999999999999 9999754

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=98.90  E-value=6.6e-09  Score=84.30  Aligned_cols=87  Identities=16%  Similarity=0.138  Sum_probs=69.2

Q ss_pred             HHHHHHHHHHHhhhCC-CCCeeEEeceeee---cCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYR-HPKILSVLHPIEE---CPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPAN   89 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLr-HPnIL~l~e~~ee---~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (138)
                      ..+.+.+|+.+|.+++ ||||+++++....   ..+.++++||++.++|.+.+....                       
T Consensus        44 ~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~e~~~~~L~~~l~~~~-----------------------  100 (332)
T cd07857          44 LAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNELYLYEELMEADLHQIIRSGQ-----------------------  100 (332)
T ss_pred             hHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcEEEEEecccCCHHHHHhcCC-----------------------
Confidence            4566788999999995 9999999985332   224689999999889998886321                       


Q ss_pred             CCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          90 QSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        90 ~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                  .+++.+++.++.||++|| +|||+..    .+.|++|++
T Consensus       101 ------------~~~~~~~~~~~~qi~~aL-~~LH~~givH~dlkp~Nili  138 (332)
T cd07857         101 ------------PLTDAHFQSFIYQILCGL-KYIHSANVLHRDLKPGNLLV  138 (332)
T ss_pred             ------------CCCHHHHHHHHHHHHHHH-HHHHhCCcccCCCCHHHeEE
Confidence                        588999999999999999 9999765    334777764

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=98.90  E-value=1.8e-08  Score=78.27  Aligned_cols=95  Identities=8%  Similarity=0.081  Sum_probs=70.5

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeecC--C---eEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEECP--D---ALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSP   85 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~--~---~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~   85 (138)
                      +...+.+.+|++.|++|+||||+++++......  +   ..++++||.. ++|.+++......                 
T Consensus        42 ~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-----------------  104 (273)
T cd05074          42 SSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIG-----------------  104 (273)
T ss_pred             hHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcccceEEEEecCCCCcHHHHHHHhccc-----------------
Confidence            445677899999999999999999999665322  1   2478889884 7998887632110                 


Q ss_pred             CCCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          86 PPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        86 ~~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                  .+...+++..+..++.||+.|| +|||+..    .+.|+++.+
T Consensus       105 ------------~~~~~l~~~~~~~~~~~i~~~l-~~lH~~~i~H~dikp~nili  146 (273)
T cd05074         105 ------------EEPFTLPLQTLVRFMIDIASGM-EYLSSKNFIHRDLAARNCML  146 (273)
T ss_pred             ------------CCCCCCCHHHHHHHHHHHHHHH-HHHHhCCEeecccchhhEEE
Confidence                        0112578889999999999999 9999765    344777765

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=98.90  E-value=1e-08  Score=89.72  Aligned_cols=94  Identities=12%  Similarity=0.024  Sum_probs=74.2

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeecC-------CeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEECP-------DALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGS   83 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~-------~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~   83 (138)
                      +.....+.+|+..|..++||||+++.+.+....       ..+++||||+. ++|.+.|......               
T Consensus        72 ~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~---------------  136 (496)
T PTZ00283         72 EADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPENVLMIALVLDYANAGDLRQEIKSRAKT---------------  136 (496)
T ss_pred             HHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcccceEEEEEEeCCCCCcHHHHHHHhhcc---------------
Confidence            455677899999999999999999988664321       14899999995 7999999754321               


Q ss_pred             CCCCCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcceee
Q psy3822          84 SPPPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAFC  137 (138)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~~  137 (138)
                                      ...+++.++..++.||++|| +|||+..    .+.|++|.++
T Consensus       137 ----------------~~~l~e~~~~~i~~qll~aL-~~lH~~~IiHrDLKP~NILl~  177 (496)
T PTZ00283        137 ----------------NRTFREHEAGLLFIQVLLAV-HHVHSKHMIHRDIKSANILLC  177 (496)
T ss_pred             ----------------CCCCCHHHHHHHHHHHHHHH-HHHHhCCEecCCCCHHHEEEe
Confidence                            12689999999999999999 9999854    5568888764

>KOG0574|consensus

Probab=98.89  E-value=2.6e-09  Score=91.82  Aligned_cols=82  Identities=11%  Similarity=0.034  Sum_probs=71.4

Q ss_pred             CcchHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCC
Q psy3822           9 KRKETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPP   87 (138)
Q Consensus         9 ~~~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~   87 (138)
                      -..+..++.+.+||++|+...-|.||.+|++... ...||+|||||. ||..++++-...                    
T Consensus        66 VPV~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK-~sDLWIVMEYCGAGSiSDI~R~R~K--------------------  124 (502)
T KOG0574|consen   66 VPVDTDLQEIIKEISIMQQCKSKYVVKYYGSYFK-HSDLWIVMEYCGAGSISDIMRARRK--------------------  124 (502)
T ss_pred             cCccchHHHHHHHHHHHHHcCCchhhhhhhhhcc-CCceEeehhhcCCCcHHHHHHHhcC--------------------
Confidence            4456778888999999999999999999998774 456999999996 799999984432                    


Q ss_pred             CCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCC
Q psy3822          88 ANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVP  126 (138)
Q Consensus        88 ~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~  126 (138)
                                    .|+|.||...+..-++|| +|||.-
T Consensus       125 --------------~L~E~EIs~iL~~TLKGL-~YLH~~  148 (502)
T KOG0574|consen  125 --------------PLSEQEISAVLRDTLKGL-QYLHDL  148 (502)
T ss_pred             --------------CccHHHHHHHHHHHHhHH-HHHHHH
Confidence                          699999999999999999 999963

>KOG0577|consensus

Probab=98.88  E-value=1.2e-09  Score=99.90  Aligned_cols=81  Identities=15%  Similarity=0.105  Sum_probs=68.8

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      .+--+-+.+||..|.+|+|||++++...+-. ....|+|||||.||-+|+|.-...                        
T Consensus        67 ~EKWqDIlKEVrFL~~l~HPntieYkgCyLr-e~TaWLVMEYClGSAsDlleVhkK------------------------  121 (948)
T KOG0577|consen   67 NEKWQDILKEVRFLRQLRHPNTIEYKGCYLR-EHTAWLVMEYCLGSASDLLEVHKK------------------------  121 (948)
T ss_pred             HHHHHHHHHHHHHHHhccCCCcccccceeec-cchHHHHHHHHhccHHHHHHHHhc------------------------
Confidence            3445677899999999999999999986643 357999999999999999974432                        


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCCC
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPST  128 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a~  128 (138)
                                +|-|.||..+..+.+.|| .|||+.+.
T Consensus       122 ----------plqEvEIAAi~~gaL~gL-aYLHS~~~  147 (948)
T KOG0577|consen  122 ----------PLQEVEIAAITHGALQGL-AYLHSHNR  147 (948)
T ss_pred             ----------cchHHHHHHHHHHHHHHH-HHHHHhhH
Confidence                      689999999999999999 99999763

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=98.88  E-value=6.6e-09  Score=80.38  Aligned_cols=82  Identities=11%  Similarity=-0.001  Sum_probs=66.1

Q ss_pred             HHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcc
Q psy3822          19 RLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASRPTH   97 (138)
Q Consensus        19 rrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   97 (138)
                      .+|...+....||||+++++.+.+ .+..++||||+. ++|.+.+....                               
T Consensus        33 ~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~-------------------------------   80 (237)
T cd05576          33 SRERLTIIPHCVPNMVCLHKYIVS-EDSVFLVLQHAEGGKLWSHISKFL-------------------------------   80 (237)
T ss_pred             hhHHHHHHhcCCCceeehhhheec-CCeEEEEEecCCCCCHHHHHHHhc-------------------------------
Confidence            456666667789999999997764 678999999996 69999987432                               


Q ss_pred             cccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcceee
Q psy3822          98 AREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAFC  137 (138)
Q Consensus        98 ~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~~  137 (138)
                          .+++.+++.++.||++|| +|||+..    .+.|++|.+.
T Consensus        81 ----~l~~~~~~~~~~ql~~~l-~~lH~~~i~H~dlkp~Nil~~  119 (237)
T cd05576          81 ----NIPEECVKRWAAEMVVAL-DALHREGIVCRDLNPNNILLD  119 (237)
T ss_pred             ----CCCHHHHHHHHHHHHHHH-HHHHhCCeeccCCCHHHEEEc
Confidence                478899999999999999 9999854    3348777653

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=98.88  E-value=6.6e-09  Score=82.50  Aligned_cols=86  Identities=10%  Similarity=0.053  Sum_probs=67.1

Q ss_pred             HHHHHHHHHHhhhCC-CCCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVYR-HPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSAS   93 (138)
Q Consensus        15 ~e~lrrEi~~L~rLr-HPnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (138)
                      ...+.+|+..+.+++ ||||+++++.+.+ ...+|+||||+.++|.+++....                           
T Consensus        57 ~~~~~~e~~~~~~~~~~~~i~~~~~~~~~-~~~~~~v~e~~~~~l~~l~~~~~---------------------------  108 (296)
T cd06618          57 NKRILMDLDVVLKSHDCPYIVKCYGYFIT-DSDVFICMELMSTCLDKLLKRIQ---------------------------  108 (296)
T ss_pred             HHHHHHHHHHHHhccCCCchHhhheeeec-CCeEEEEeeccCcCHHHHHHHhc---------------------------
Confidence            344455777777775 9999999997764 67899999999888888876432                           


Q ss_pred             CCcccccCCccHHHHHHHHHHHHHHHHhhhcCCCC-----cccCccee
Q psy3822          94 RPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPST-----YLPSSVAF  136 (138)
Q Consensus        94 ~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a~-----~~~~~~~~  136 (138)
                             ..+++.++...+.||++|| .|||+..+     +-|+++++
T Consensus       109 -------~~l~~~~~~~i~~~i~~~l-~~lH~~~~i~H~dl~p~nill  148 (296)
T cd06618         109 -------GPIPEDILGKMTVAIVKAL-HYLKEKHGVIHRDVKPSNILL  148 (296)
T ss_pred             -------CCCCHHHHHHHHHHHHHHH-HHHHhhCCEecCCCcHHHEEE
Confidence                   1588889999999999999 99997433     34777665

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=98.88  E-value=5.6e-09  Score=96.24  Aligned_cols=68  Identities=10%  Similarity=0.133  Sum_probs=58.8

Q ss_pred             HHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcc
Q psy3822          19 RLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASRPTH   97 (138)
Q Consensus        19 rrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   97 (138)
                      .+|++.|++++||||+++++.+.+ .+..++||||+. ++|.+++.                                  
T Consensus       731 ~~~~~~l~~l~HpnIv~~~~~~~~-~~~~~lv~Ey~~~g~L~~~l~----------------------------------  775 (968)
T PLN00113        731 SSEIADMGKLQHPNIVKLIGLCRS-EKGAYLIHEYIEGKNLSEVLR----------------------------------  775 (968)
T ss_pred             HHHHHHHhhCCCCCcceEEEEEEc-CCCCEEEEeCCCCCcHHHHHh----------------------------------
Confidence            467999999999999999997764 668999999995 79999996                                  


Q ss_pred             cccCCccHHHHHHHHHHHHHHHHhhhcCC
Q psy3822          98 AREYHFLDIEIKYGVAQVDSSEFTYLYVP  126 (138)
Q Consensus        98 ~~~~~l~E~eik~gl~QI~~aL~~fLH~~  126 (138)
                          .+++.+...++.||++|| +|||..
T Consensus       776 ----~l~~~~~~~i~~~ia~~L-~yLH~~  799 (968)
T PLN00113        776 ----NLSWERRRKIAIGIAKAL-RFLHCR  799 (968)
T ss_pred             ----cCCHHHHHHHHHHHHHHH-HHhccC
Confidence                356678889999999999 999954

>KOG0607|consensus

Probab=98.87  E-value=3.2e-09  Score=91.56  Aligned_cols=85  Identities=18%  Similarity=0.224  Sum_probs=70.1

Q ss_pred             HHHHHHHHHHHHhhhCC-CCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYR-HPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLr-HPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      -.-.++-||+.++.... |||||++++-||+ .+.+|+|||-+. |+|-+-+.++.                        
T Consensus       117 HsR~RvfREVe~f~~Cqgh~nilqLiefFEd-d~~FYLVfEKm~GGplLshI~~~~------------------------  171 (463)
T KOG0607|consen  117 HSRSRVFREVETFYQCQGHKNILQLIEFFED-DTRFYLVFEKMRGGPLLSHIQKRK------------------------  171 (463)
T ss_pred             hHHHHHHHHHHHHHHhcCCccHHHHHHHhcc-cceEEEEEecccCchHHHHHHHhh------------------------
Confidence            34467789999999986 9999999997764 678999999994 68877776442                        


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcc
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSV  134 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~  134 (138)
                                 .|.|.|+...+.+|+.|| +|||...    .+.|.+|
T Consensus       172 -----------~F~E~EAs~vvkdia~aL-dFlH~kgIAHRDlKPENi  207 (463)
T KOG0607|consen  172 -----------HFNEREASRVVKDIASAL-DFLHTKGIAHRDLKPENI  207 (463)
T ss_pred             -----------hccHHHHHHHHHHHHHHH-HHHhhcCcccccCCccce
Confidence                       699999999999999999 9999754    5556654

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=98.87  E-value=1.6e-08  Score=83.15  Aligned_cols=123  Identities=12%  Similarity=0.015  Sum_probs=75.8

Q ss_pred             HHHHHHHHHHHhhhC-CCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCC-------------CCCCC
Q psy3822          14 VTEILRLGVKQLEVY-RHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHS-------------TNPVT   78 (138)
Q Consensus        14 ~~e~lrrEi~~L~rL-rHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~-------------~~~~~   78 (138)
                      -.+.+.+|+.++.++ +||||+++++.+.+....++++|||+. ++|.++|...........             +-...
T Consensus        53 ~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  132 (337)
T cd05054          53 EYKALMTELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQR  132 (337)
T ss_pred             HHHHHHHHHHHHHhhccCcchhheeeeEecCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccc
Confidence            346678899999999 899999999977655678999999995 699999965322100000             00000


Q ss_pred             CCCCCCCCCCCC-------------CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcceee
Q psy3822          79 GGSGSSPPPANQ-------------SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAFC  137 (138)
Q Consensus        79 ~~~~~~~~~~~~-------------~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~~  137 (138)
                      ....+...+...             ............+++..+..++.||++|| +|||+..    .+.|++|.+.
T Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL-~~lH~~~ivHrDikp~Nill~  207 (337)
T cd05054         133 LDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELYKEPLTLEDLISYSFQVARGM-EFLASRKCIHRDLAARNILLS  207 (337)
T ss_pred             cccCCccccccccccccCcchhhcccchhhhHHhhcCCCHHHHHHHHHHHHHHH-HHHHhCCeecCCCCcceEEEe
Confidence            000000000000             00000011123688899999999999999 9999754    4558887653

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>KOG0666|consensus

Probab=98.87  E-value=2.8e-09  Score=91.58  Aligned_cols=94  Identities=13%  Similarity=0.132  Sum_probs=77.6

Q ss_pred             chHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          11 KETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        11 ~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      ...+-...-||+.+++.|+||||+.++.++-+.+..++++.||...+|-.+++......                     
T Consensus        67 ~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v~l~fdYAEhDL~~II~fHr~~~---------------------  125 (438)
T KOG0666|consen   67 GTGISMSACREIALLRELKHPNVISLVKVFLSHDKKVWLLFDYAEHDLWHIIKFHRASK---------------------  125 (438)
T ss_pred             CCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceEEEEehhhhhhHHHHHHHhccch---------------------
Confidence            34566677899999999999999999999887677999999999999999999765311                     


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcce
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVA  135 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~  135 (138)
                               ..-+.---+|.++.||+.|+ .|||++=    .+.|.++.
T Consensus       126 ---------~~~lp~~mvKsilwQil~Gv-~YLH~NWvlHRDLKPaNIl  164 (438)
T KOG0666|consen  126 ---------AKQLPRSMVKSILWQILDGV-HYLHSNWVLHRDLKPANIL  164 (438)
T ss_pred             ---------hccCCHHHHHHHHHHHHhhh-HHHhhhheeeccCCcceEE
Confidence                     12477788999999999999 9999864    55677764

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=98.86  E-value=3.8e-08  Score=70.79  Aligned_cols=88  Identities=22%  Similarity=0.200  Sum_probs=72.7

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ..+.+.+|++.|++++||+|++++.... ..+..+++||++. .+|.+++....                          
T Consensus        34 ~~~~~~~e~~~~~~l~~~~i~~~~~~~~-~~~~~~~~~e~~~~~~l~~~~~~~~--------------------------   86 (215)
T cd00180          34 LLEELLREIEILKKLNHPNIVKLYGVFE-DENHLYLVMEYCEGGSLKDLLKENE--------------------------   86 (215)
T ss_pred             HHHHHHHHHHHHHhcCCCCeeeEeeeee-cCCeEEEEEecCCCCcHHHHHHhcc--------------------------
Confidence            3578899999999999999999999665 4578999999997 79999987431                          


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcceee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAFC  137 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~~  137 (138)
                              ..+++.++..++.|++++| +|||+..    .+-|++|++.
T Consensus        87 --------~~~~~~~~~~~~~~l~~~l-~~lh~~~~~H~dl~~~ni~~~  126 (215)
T cd00180          87 --------GKLSEDEILRILLQILEGL-EYLHSNGIIHRDLKPENILLD  126 (215)
T ss_pred             --------CCCCHHHHHHHHHHHHHHH-HHHHhCCeeccCCCHhhEEEe
Confidence                    1477889999999999999 9999864    3347777653

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG0599|consensus

Probab=98.86  E-value=4.1e-09  Score=89.51  Aligned_cols=87  Identities=16%  Similarity=0.167  Sum_probs=74.0

Q ss_pred             chHHHHHHHHHHHHhhhC-CCCCeeEEeceeeecCCeEEEEeccc-cccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          11 KETVTEILRLGVKQLEVY-RHPKILSVLHPIEECPDALAFATEPV-YASLASILAFQESPAPNHSTNPVTGGSGSSPPPA   88 (138)
Q Consensus        11 ~e~~~e~lrrEi~~L~rL-rHPnIL~l~e~~ee~~~~L~fVtE~V-~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (138)
                      ...+.+.-++|+.+|+++ -||+|+++.+..| ++.-+++|.|.+ .|.|+|+|..+-                      
T Consensus        62 ~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~ye-s~sF~FlVFdl~prGELFDyLts~V----------------------  118 (411)
T KOG0599|consen   62 PYEMREATRQEISILRQVMGHPYIIDLQDVYE-SDAFVFLVFDLMPRGELFDYLTSKV----------------------  118 (411)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCcEEEeeeecc-CcchhhhhhhhcccchHHHHhhhhe----------------------
Confidence            457888889999999997 5999999999665 677899999999 499999998542                      


Q ss_pred             CCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcc
Q psy3822          89 NQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSV  134 (138)
Q Consensus        89 ~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~  134 (138)
                                   .|+|.+.+.++.|+.+|+ +|||...    .+.|.++
T Consensus       119 -------------tlSEK~tR~iMrqlfegV-eylHa~~IVHRDLKpENI  154 (411)
T KOG0599|consen  119 -------------TLSEKETRRIMRQLFEGV-EYLHARNIVHRDLKPENI  154 (411)
T ss_pred             -------------eecHHHHHHHHHHHHHHH-HHHHHhhhhhcccChhhe
Confidence                         699999999999999999 9999754    4556554

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=98.85  E-value=1.5e-08  Score=82.44  Aligned_cols=86  Identities=15%  Similarity=0.118  Sum_probs=68.2

Q ss_pred             HHHHHHHHHHHhhhCC-CCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYR-HPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLr-HPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      ..+.+.+|+.+|.++. ||+|+++++.++ +.+.+|+||||+. ++|.+.+....                         
T Consensus        43 ~~~~~~~e~~~l~~~~~~~~i~~~~~~~~-~~~~~~lv~Ey~~~g~L~~~i~~~~-------------------------   96 (323)
T cd05615          43 DVECTMVEKRVLALQDKPPFLTQLHSCFQ-TVDRLYFVMEYVNGGDLMYHIQQVG-------------------------   96 (323)
T ss_pred             HHHHHHHHHHHHHhccCCCchhheeeEEe-cCCEEEEEEcCCCCCcHHHHHHHcC-------------------------
Confidence            4466788999999886 467778888665 4678999999995 79999886432                         


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                .+++.++..++.||+.|| .|||+..    .+.|++|.+
T Consensus        97 ----------~l~~~~~~~i~~qi~~al-~~lH~~~ivHrDikp~Nill  134 (323)
T cd05615          97 ----------KFKEPQAVFYAAEISVGL-FFLHRRGIIYRDLKLDNVML  134 (323)
T ss_pred             ----------CCCHHHHHHHHHHHHHHH-HHHHHCCeeccCCCHHHeEE
Confidence                      588999999999999999 9999754    344777654

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>PRK10345 hypothetical protein; Provisional

Probab=98.85  E-value=1.3e-08  Score=80.96  Aligned_cols=85  Identities=11%  Similarity=-0.012  Sum_probs=63.6

Q ss_pred             HHHHHHHHHHHhhhC-----CCCCeeEEeceeeecC--CeEE-EEecccc---ccHHHHHhhcCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVY-----RHPKILSVLHPIEECP--DALA-FATEPVY---ASLASILAFQESPAPNHSTNPVTGGSG   82 (138)
Q Consensus        14 ~~e~lrrEi~~L~rL-----rHPnIL~l~e~~ee~~--~~L~-fVtE~V~---~sL~~~L~~~~~~~~~~~~~~~~~~~~   82 (138)
                      ..+.+++|+..|++|     .||||+++++.++++.  ..++ +||||..   ++|.+++++.                 
T Consensus        39 ~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I~e~~G~~~~tL~~~l~~~-----------------  101 (210)
T PRK10345         39 GDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVIADFDGKPSITLTEFAEQC-----------------  101 (210)
T ss_pred             hHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEEecCCCCcchhHHHHHHcc-----------------
Confidence            346789999999999     5799999999887543  2434 7899943   6999999632                 


Q ss_pred             CCCCCCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          83 SSPPPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                         .++|.  ...+.|++.++++|||++.    .+.|+++.+
T Consensus       102 -------------------~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl  138 (210)
T PRK10345        102 -------------------RYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILC  138 (210)
T ss_pred             -------------------cccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEE
Confidence                               24444  3568888888779999876    556877765

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=98.84  E-value=2.5e-08  Score=78.87  Aligned_cols=80  Identities=15%  Similarity=0.202  Sum_probs=62.8

Q ss_pred             HHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccc
Q psy3822          20 LGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASRPTHA   98 (138)
Q Consensus        20 rEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   98 (138)
                      +..+.+..+.||||+.+++.+++ .+.+++||||+. ++|.+++....                                
T Consensus        46 ~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~v~e~~~g~~L~~~l~~~~--------------------------------   92 (278)
T cd05606          46 IMLSLVSTGDCPFIVCMSYAFHT-PDKLSFILDLMNGGDLHYHLSQHG--------------------------------   92 (278)
T ss_pred             HHHHHHHhCCCCcEeeeeeeeec-CCEEEEEEecCCCCcHHHHHHhcC--------------------------------
Confidence            33455566789999999998774 678999999995 69988886322                                


Q ss_pred             ccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          99 REYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        99 ~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                         .+++.+++.++.|+++|| .|||+..    .+.|+++.+
T Consensus        93 ---~l~~~~~~~~~~ql~~~l-~~lH~~~i~H~di~p~nili  130 (278)
T cd05606          93 ---VFSEAEMRFYAAEIILGL-EHMHNRFVVYRDLKPANILL  130 (278)
T ss_pred             ---CCCHHHHHHHHHHHHHHH-HHHHHCCEEcCCCCHHHEEE
Confidence               588999999999999999 9999754    334666554

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>KOG1187|consensus

Probab=98.83  E-value=1.5e-08  Score=86.28  Aligned_cols=79  Identities=18%  Similarity=0.032  Sum_probs=63.9

Q ss_pred             HHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          16 EILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASR   94 (138)
Q Consensus        16 e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (138)
                      ..+.+|+.+|.+++|||+|+|++-..|..+...+|.||+. |||.+.|.....                           
T Consensus       116 ~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~~~~LVYEym~nGsL~d~L~~~~~---------------------------  168 (361)
T KOG1187|consen  116 REFLNEVEILSRLRHPNLVKLLGYCLEGGEHRLLVYEYMPNGSLEDHLHGKKG---------------------------  168 (361)
T ss_pred             hHHHHHHHHHhcCCCcCcccEEEEEecCCceEEEEEEccCCCCHHHHhCCCCC---------------------------
Confidence            3389999999999999999999977764336999999996 899999984321                           


Q ss_pred             CcccccCCccHHHHHHHHHHHHHHHHhhhcCCCC
Q psy3822          95 PTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPST  128 (138)
Q Consensus        95 ~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a~  128 (138)
                           . .|+-..--++..++++|| +|||+...
T Consensus       169 -----~-~L~W~~R~kIa~g~A~gL-~yLH~~~~  195 (361)
T KOG1187|consen  169 -----E-PLDWETRLKIALGAARGL-AYLHEGCP  195 (361)
T ss_pred             -----C-CCCHHHHHHHHHHHHHHH-HHHccCCC
Confidence                 0 355545557899999999 99999874

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=98.82  E-value=2.2e-08  Score=78.95  Aligned_cols=72  Identities=11%  Similarity=0.129  Sum_probs=60.2

Q ss_pred             CCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCccHHH
Q psy3822          29 RHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASRPTHAREYHFLDIE  107 (138)
Q Consensus        29 rHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~E~e  107 (138)
                      +||||+++++.+.+ .+.+++||||+. ++|.+++....                                   .+++.+
T Consensus        67 ~h~~iv~~~~~~~~-~~~~~iv~e~~~~~~L~~~l~~~~-----------------------------------~l~~~~  110 (267)
T PHA03390         67 DNPNFIKLYYSVTT-LKGHVLIMDYIKDGDLFDLLKKEG-----------------------------------KLSEAE  110 (267)
T ss_pred             cCCCEEEEEEEEec-CCeeEEEEEcCCCCcHHHHHHhcC-----------------------------------CCCHHH
Confidence            69999999998875 678999999995 79999997432                                   588999


Q ss_pred             HHHHHHHHHHHHHhhhcCCC----CcccCcceee
Q psy3822         108 IKYGVAQVDSSEFTYLYVPS----TYLPSSVAFC  137 (138)
Q Consensus       108 ik~gl~QI~~aL~~fLH~~a----~~~~~~~~~~  137 (138)
                      ++.++.||++|| .|||+..    .+.|++++++
T Consensus       111 ~~~~~~qi~~~l-~~lH~~~i~H~dl~p~nil~~  143 (267)
T PHA03390        111 VKKIIRQLVEAL-NDLHKHNIIHNDIKLENVLYD  143 (267)
T ss_pred             HHHHHHHHHHHH-HHHHhCCeeeCCCCHHHEEEe
Confidence            999999999999 9999876    3347777654

>PTZ00284 protein kinase; Provisional

Probab=98.82  E-value=1.6e-08  Score=86.72  Aligned_cols=86  Identities=9%  Similarity=0.128  Sum_probs=69.1

Q ss_pred             HHHHHHHHHHhhhCCCCC------eeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVYRHPK------ILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPA   88 (138)
Q Consensus        15 ~e~lrrEi~~L~rLrHPn------IL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (138)
                      .+..++|+++|++++|++      |+.+++.+....+.+++|||++.++|.+++.+..                      
T Consensus       169 ~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~~iv~~~~g~~l~~~l~~~~----------------------  226 (467)
T PTZ00284        169 TRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHMCIVMPKYGPCLLDWIMKHG----------------------  226 (467)
T ss_pred             HHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceEEEEEeccCCCHHHHHHHcC----------------------
Confidence            445678999999887765      8888887776567899999999889999887432                      


Q ss_pred             CCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCCCc-----ccCccee
Q psy3822          89 NQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPSTY-----LPSSVAF  136 (138)
Q Consensus        89 ~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a~~-----~~~~~~~  136 (138)
                                   .|++.+++.++.||+.|| +|||...+.     .|++|.+
T Consensus       227 -------------~l~~~~~~~i~~qi~~aL-~yLH~~~gIiHrDlKP~NILl  265 (467)
T PTZ00284        227 -------------PFSHRHLAQIIFQTGVAL-DYFHTELHLMHTDLKPENILM  265 (467)
T ss_pred             -------------CCCHHHHHHHHHHHHHHH-HHHHhcCCeecCCCCHHHEEE
Confidence                         588899999999999999 999975444     4777765

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=98.82  E-value=1.8e-08  Score=75.00  Aligned_cols=85  Identities=20%  Similarity=0.283  Sum_probs=70.3

Q ss_pred             HHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccccc-cHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYA-SLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSAS   93 (138)
Q Consensus        15 ~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~~-sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (138)
                      .+.+++|++.+++++||||+++++.+.. ....+++||++.+ +|.+++....                           
T Consensus        31 ~~~~~~e~~~~~~l~~~~i~~~~~~~~~-~~~~~l~~e~~~~~~L~~~~~~~~---------------------------   82 (244)
T smart00220       31 RERILREISILKKLKHPNIVRLYDVFED-EDKLYLVMEYCDGGDLFDLLKKRG---------------------------   82 (244)
T ss_pred             HHHHHHHHHHHHhCCCCcHHHHHhheee-CCEEEEEEeCCCCCCHHHHHHhcc---------------------------
Confidence            6888999999999999999999997764 5789999999975 9999987432                           


Q ss_pred             CCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          94 RPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        94 ~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                              .+++..+..++.|++.++ .|||+..    .+-|++|.+
T Consensus        83 --------~~~~~~~~~~~~~l~~~l-~~lh~~~i~h~~i~~~ni~~  120 (244)
T smart00220       83 --------RLSEDEARFYARQILSAL-EYLHSNGIIHRDLKPENILL  120 (244)
T ss_pred             --------CCCHHHHHHHHHHHHHHH-HHHHHcCeecCCcCHHHeEE
Confidence                    277788999999999999 9999863    223666554

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=98.80  E-value=4.6e-08  Score=77.58  Aligned_cols=76  Identities=14%  Similarity=0.195  Sum_probs=60.9

Q ss_pred             HhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCC
Q psy3822          24 QLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASRPTHAREYH  102 (138)
Q Consensus        24 ~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  102 (138)
                      .+..++||||+.+++.+.+ .+.+++||||+. ++|.+++....                                   .
T Consensus        50 ~~~~~~~~~i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~i~~~~-----------------------------------~   93 (279)
T cd05633          50 LVSTGDCPFIVCMTYAFHT-PDKLCFILDLMNGGDLHYHLSQHG-----------------------------------V   93 (279)
T ss_pred             HHhhCCCCcEeEEEEEEec-CCeEEEEEecCCCCCHHHHHHhcC-----------------------------------C
Confidence            3344589999999997764 678999999995 69998887432                                   5


Q ss_pred             ccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822         103 FLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus       103 l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                      +++..++.++.||+.|| +|||+..    .+.|+++.+
T Consensus        94 l~~~~~~~i~~qi~~al-~~lH~~~ivH~dikp~Nil~  130 (279)
T cd05633          94 FSEKEMRFYATEIILGL-EHMHNRFVVYRDLKPANILL  130 (279)
T ss_pred             CCHHHHHHHHHHHHHHH-HHHHHCCcCCCCCCHHHEEE
Confidence            88999999999999999 9999765    334777655

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=98.79  E-value=3.7e-08  Score=93.25  Aligned_cols=99  Identities=11%  Similarity=0.049  Sum_probs=73.7

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      +...+.+.+|+.+|++|+||||+++++.+++ .+.+++||||+. ++|.+++....... .                   
T Consensus        43 e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d-~~~lyLVMEY~eGGSL~~lL~s~~~~~-~-------------------  101 (932)
T PRK13184         43 PLLKKRFLREAKIAADLIHPGIVPVYSICSD-GDPVYYTMPYIEGYTLKSLLKSVWQKE-S-------------------  101 (932)
T ss_pred             HHHHHHHHHHHHHHHhCCCcCcCeEEEEEee-CCEEEEEEEcCCCCCHHHHHHHhhhcc-c-------------------
Confidence            4456778999999999999999999997764 678999999995 69999997532110 0                   


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                         . .......++...+...+.||++|| +|||+..    .+.|++|.+
T Consensus       102 ---l-~e~~~~~lsv~~iL~I~~QIa~AL-~yLHs~GIIHRDLKPeNILL  146 (932)
T PRK13184        102 ---L-SKELAEKTSVGAFLSIFHKICATI-EYVHSKGVLHRDLKPDNILL  146 (932)
T ss_pred             ---c-chhhhcccCHHHHHHHHHHHHHHH-HHHHHCCccccCCchheEEE
Confidence               0 000112456677888999999999 9999864    445888764

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=98.75  E-value=5.4e-08  Score=72.35  Aligned_cols=87  Identities=18%  Similarity=0.260  Sum_probs=70.6

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccccc-cHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYA-SLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~~-sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ..+.+++|+..+.+++||||+++++... ..+..++++|++.+ +|.+++.....                         
T Consensus        40 ~~~~~~~e~~~~~~~~~~~i~~~~~~~~-~~~~~~~v~e~~~~~~L~~~~~~~~~-------------------------   93 (225)
T smart00221       40 QREEFLREIRILKKLKHPNIVKLYGVFE-DPEPLYLVMEYCEGGDLFDYLRKKGG-------------------------   93 (225)
T ss_pred             HHHHHHHHHHHHHhCCCCChhhheeeee-cCCceEEEEeccCCCCHHHHHHhccc-------------------------
Confidence            5688999999999999999999999665 46789999999975 99999874320                         


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                               .+++..+..++.|++.+| .|||+..    .+-|++|.+
T Consensus        94 ---------~~~~~~~~~~~~~l~~~l-~~lh~~~i~h~di~~~ni~v  131 (225)
T smart00221       94 ---------KLSEEEARFYLRQILEAL-EYLHSLGIVHRDLKPENILL  131 (225)
T ss_pred             ---------CCCHHHHHHHHHHHHHHH-HHHHhCCeecCCCCHHHEEE
Confidence                     167889999999999999 9999873    223555544

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG0662|consensus

Probab=98.74  E-value=1.3e-08  Score=82.64  Aligned_cols=84  Identities=11%  Similarity=0.015  Sum_probs=71.7

Q ss_pred             CCcchHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCC
Q psy3822           8 PKRKETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPP   87 (138)
Q Consensus         8 ~~~~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~   87 (138)
                      ..+.|.+-....|||-+|+.|+|-|||++++.+. +.+.+.+|.|+|..+|..+...-.                     
T Consensus        38 ddddegvpssalreicllkelkhknivrl~dvlh-sdkkltlvfe~cdqdlkkyfdsln---------------------   95 (292)
T KOG0662|consen   38 DDDDEGVPSSALREICLLKELKHKNIVRLHDVLH-SDKKLTLVFEFCDQDLKKYFDSLN---------------------   95 (292)
T ss_pred             cCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhc-cCceeEEeHHHhhHHHHHHHHhcC---------------------
Confidence            3455677788899999999999999999999876 467899999999999988876321                     


Q ss_pred             CCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC
Q psy3822          88 ANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS  127 (138)
Q Consensus        88 ~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a  127 (138)
                                   ..++...++..++|++.|| .|||++.
T Consensus        96 -------------g~~d~~~~rsfmlqllrgl-~fchshn  121 (292)
T KOG0662|consen   96 -------------GDLDPEIVRSFMLQLLRGL-GFCHSHN  121 (292)
T ss_pred             -------------CcCCHHHHHHHHHHHHhhh-hhhhhhh
Confidence                         2588888999999999999 9999876

>KOG1094|consensus

Probab=98.73  E-value=1.8e-08  Score=91.96  Aligned_cols=59  Identities=24%  Similarity=0.328  Sum_probs=49.5

Q ss_pred             CCCcchHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcC
Q psy3822           7 KPKRKETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQE   66 (138)
Q Consensus         7 K~~~~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~   66 (138)
                      ++.........+++||++|.+|+||||++|+.+.. ..+.++++|||+. |+|.++|....
T Consensus       571 r~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~-~DePicmI~EYmEnGDLnqFl~ahe  630 (807)
T KOG1094|consen  571 RPDATKNARNDFLKEIKILSRLKHPNIVELLGVCV-QDDPLCMITEYMENGDLNQFLSAHE  630 (807)
T ss_pred             CcccchhHHHHHHHHHHHHhccCCCCeeEEEeeee-cCCchHHHHHHHhcCcHHHHHHhcc
Confidence            44455555678899999999999999999999765 3578999999995 89999998664

>KOG4645|consensus

Probab=98.71  E-value=3.7e-09  Score=102.10  Aligned_cols=78  Identities=19%  Similarity=0.156  Sum_probs=69.2

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      ..+..+.+|.++|..|.|||||++|. +|-.++.+++.||||. |+|++++.-.                          
T Consensus      1276 k~~~~i~eEm~vlE~lnHpNlV~YyG-VEvHRekv~IFMEyC~~GsLa~ll~~g-------------------------- 1328 (1509)
T KOG4645|consen 1276 KTFKLIAEEMKVLEGLNHPNLVRYYG-VEVHREKVYIFMEYCEGGSLASLLEHG-------------------------- 1328 (1509)
T ss_pred             ccCcchHHHHHHHHhccCccccccCc-eeecHHHHHHHHHHhccCcHHHHHHhc--------------------------
Confidence            45677899999999999999999999 7767889999999995 8999999732                          


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS  127 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a  127 (138)
                               .-++|..++.+..|+++|| .|||++.
T Consensus      1329 ---------ri~dE~vt~vyt~qll~gl-a~LH~~g 1354 (1509)
T KOG4645|consen 1329 ---------RIEDEMVTRVYTKQLLEGL-AYLHEHG 1354 (1509)
T ss_pred             ---------chhhhhHHHHHHHHHHHHH-HHHHhcC
Confidence                     1578999999999999999 9999976

>KOG4721|consensus

Probab=98.71  E-value=4.1e-08  Score=89.71  Aligned_cols=77  Identities=16%  Similarity=0.176  Sum_probs=62.5

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccc-cccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPV-YASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V-~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      +-+.=..||+-|++|+||||+.+.++.-. ....+|+|||| .|-|.++|+...                          
T Consensus       155 V~elkETdIKHLRkLkH~NII~FkGVCtq-sPcyCIiMEfCa~GqL~~VLka~~--------------------------  207 (904)
T KOG4721|consen  155 VRELKETDIKHLRKLKHPNIITFKGVCTQ-SPCYCIIMEFCAQGQLYEVLKAGR--------------------------  207 (904)
T ss_pred             HhhhhhhhHHHHHhccCcceeeEeeeecC-CceeEEeeeccccccHHHHHhccC--------------------------
Confidence            34444678999999999999999996653 45899999999 589999998432                          


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS  127 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a  127 (138)
                               .+...-.-.|..+|+.|+ +|||.+.
T Consensus       208 ---------~itp~llv~Wsk~IA~GM-~YLH~hK  232 (904)
T KOG4721|consen  208 ---------PITPSLLVDWSKGIAGGM-NYLHLHK  232 (904)
T ss_pred             ---------ccCHHHHHHHHHHhhhhh-HHHHHhh
Confidence                     344456667899999999 9999875

>KOG4257|consensus

Probab=98.70  E-value=4.4e-08  Score=90.15  Aligned_cols=87  Identities=16%  Similarity=0.131  Sum_probs=70.7

Q ss_pred             ccCCCCcchHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccc-cccHHHHHhhcCCCCCCCCCCCCCCCCC
Q psy3822           4 KLHKPKRKETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPV-YASLASILAFQESPAPNHSTNPVTGGSG   82 (138)
Q Consensus         4 k~~K~~~~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V-~~sL~~~L~~~~~~~~~~~~~~~~~~~~   82 (138)
                      |..|....-.-.+.+..|+.+|++++||||+++.+.++|  ..+|+|||.+ .|.|+.+|+...                
T Consensus       424 KtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e--~P~WivmEL~~~GELr~yLq~nk----------------  485 (974)
T KOG4257|consen  424 KTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE--QPMWIVMELAPLGELREYLQQNK----------------  485 (974)
T ss_pred             ehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec--cceeEEEecccchhHHHHHHhcc----------------
Confidence            444543334447889999999999999999999998876  5699999999 599999998543                


Q ss_pred             CCCCCCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC
Q psy3822          83 SSPPPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS  127 (138)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a  127 (138)
                                        +.|+-.-.-.+..||+.|| .|||+..
T Consensus       486 ------------------~sL~l~tL~ly~~Qi~tal-aYLeSkr  511 (974)
T KOG4257|consen  486 ------------------DSLPLRTLTLYCYQICTAL-AYLESKR  511 (974)
T ss_pred             ------------------ccchHHHHHHHHHHHHHHH-HHHHhhc
Confidence                              2466677778999999999 9999753

>KOG0668|consensus

Probab=98.66  E-value=2.7e-08  Score=82.96  Aligned_cols=83  Identities=18%  Similarity=0.218  Sum_probs=65.1

Q ss_pred             HHHHHHHHHHhhhCC-CCCeeEEeceeeec-CCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVYR-HPKILSVLHPIEEC-PDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        15 ~e~lrrEi~~L~rLr-HPnIL~l~e~~ee~-~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ..-++||+++|+.|+ ||||+.+++.+.+. ...-+++.|+|...=+..|-.                            
T Consensus        76 kkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiFE~v~n~Dfk~ly~----------------------------  127 (338)
T KOG0668|consen   76 KKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIFEYVNNTDFKQLYP----------------------------  127 (338)
T ss_pred             HHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHhhhhccccHHHHhh----------------------------
Confidence            456799999999999 99999999977653 246899999997533333331                            


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcce
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVA  135 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~  135 (138)
                               .|++.+|++++.||++|| +|||+.+    ...|-+|.
T Consensus       128 ---------tl~d~dIryY~~elLkAL-dyCHS~GImHRDVKPhNvm  164 (338)
T KOG0668|consen  128 ---------TLTDYDIRYYIYELLKAL-DYCHSMGIMHRDVKPHNVM  164 (338)
T ss_pred             ---------hhchhhHHHHHHHHHHHH-hHHHhcCcccccCCcceee
Confidence                     588899999999999999 9999966    33466553

>KOG1152|consensus

Probab=98.65  E-value=2.7e-08  Score=90.56  Aligned_cols=74  Identities=22%  Similarity=0.164  Sum_probs=65.1

Q ss_pred             HHHHHHHHhhhCC---CCCeeEEeceeeecCCeEEEEecccc-c-cHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          17 ILRLGVKQLEVYR---HPKILSVLHPIEECPDALAFATEPVY-A-SLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        17 ~lrrEi~~L~rLr---HPnIL~l~e~~ee~~~~L~fVtE~V~-~-sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      .+.-||++|.+|.   |||||++++.|| +.+..|++||.-. + +|++++..+.                         
T Consensus       612 tVp~EIqIla~l~~~sH~NIlKlLdfFE-ddd~yyl~te~hg~gIDLFd~IE~kp-------------------------  665 (772)
T KOG1152|consen  612 TVPSEIQILATLNKHSHENILKLLDFFE-DDDYYYLETEVHGEGIDLFDFIEFKP-------------------------  665 (772)
T ss_pred             ccchhHHHHHHhhhcCccchhhhhheee-cCCeeEEEecCCCCCcchhhhhhccC-------------------------
Confidence            3467999999998   999999999665 5789999999874 4 9999998765                         


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS  127 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a  127 (138)
                                .++|.|+|.++.||.-|. +.||+..
T Consensus       666 ----------~m~E~eAk~IFkQV~agi-~hlh~~~  690 (772)
T KOG1152|consen  666 ----------RMDEPEAKLIFKQVVAGI-KHLHDQG  690 (772)
T ss_pred             ----------ccchHHHHHHHHHHHhcc-ccccccC
Confidence                      589999999999999999 9999865

>KOG0694|consensus

Probab=98.62  E-value=2.8e-08  Score=90.95  Aligned_cols=77  Identities=19%  Similarity=0.228  Sum_probs=62.7

Q ss_pred             HHHHHHHHHHHHhhhC-CCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVY-RHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rL-rHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      ..++.++.|..++.-. +||.+++++..|. |++++||||||+. |++   ..-+.                        
T Consensus       410 d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQ-T~~~l~fvmey~~Ggdm---~~~~~------------------------  461 (694)
T KOG0694|consen  410 DEVESLMCEKRIFELANRHPFLVNLFSCFQ-TKEHLFFVMEYVAGGDL---MHHIH------------------------  461 (694)
T ss_pred             ccHHHHHHHHHHHHHhccCCeEeecccccc-cCCeEEEEEEecCCCcE---EEEEe------------------------
Confidence            3467888888888765 5999999999886 7999999999996 462   22111                        


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS  127 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a  127 (138)
                               ...|+|..++.+...|+.|| +|||++.
T Consensus       462 ---------~~~F~e~rarfyaAev~l~L-~fLH~~~  488 (694)
T KOG0694|consen  462 ---------TDVFSEPRARFYAAEVVLGL-QFLHENG  488 (694)
T ss_pred             ---------cccccHHHHHHHHHHHHHHH-HHHHhcC
Confidence                     12699999999999999999 9999987

>KOG0604|consensus

Probab=98.55  E-value=2e-07  Score=79.86  Aligned_cols=86  Identities=20%  Similarity=0.198  Sum_probs=69.0

Q ss_pred             HHHHHHHHhhhC-CCCCeeEEeceeee---cCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          17 ILRLGVKQLEVY-RHPKILSVLHPIEE---CPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        17 ~lrrEi~~L~rL-rHPnIL~l~e~~ee---~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      ..|||+.+--+- -|||||++++.+|-   .++.|-+|||.+. |+|++.+..++..                       
T Consensus       100 KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVmE~meGGeLfsriq~~g~~-----------------------  156 (400)
T KOG0604|consen  100 KARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVMECMEGGELFSRIQDRGDQ-----------------------  156 (400)
T ss_pred             HHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEeeeecccchHHHHHHHHcccc-----------------------
Confidence            357888876543 59999999997764   3468999999995 7999999876532                       


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                .|+|.|+..++.||..|+ +|||+..    .+.|.++.|
T Consensus       157 ----------afTErea~eI~~qI~~Av-~~lH~~nIAHRDlKpENLLy  194 (400)
T KOG0604|consen  157 ----------AFTEREASEIMKQIGLAV-RYLHSMNIAHRDLKPENLLY  194 (400)
T ss_pred             ----------cchHHHHHHHHHHHHHHH-HHHHhcchhhccCChhheee
Confidence                      699999999999999999 9999743    556776655

>KOG0605|consensus

Probab=98.50  E-value=4.8e-07  Score=81.19  Aligned_cols=85  Identities=11%  Similarity=0.122  Sum_probs=74.2

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccc-cccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPV-YASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V-~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      ..++.++-|=.+|..-..|.||.+|.+|.+ +++||+||||+ +|++..+|...+                         
T Consensus       183 ~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD-~~~LYLiMEylPGGD~mTLL~~~~-------------------------  236 (550)
T KOG0605|consen  183 NQVEHVRAERDILAEVDSPWVVKLYYSFQD-KEYLYLIMEYLPGGDMMTLLMRKD-------------------------  236 (550)
T ss_pred             hhHHHHHHHHHHhhhcCCCcEEEEEEEecC-CCeeEEEEEecCCccHHHHHHhcC-------------------------
Confidence            345778999999999999999999999984 78999999999 579999998664                         


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcc
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSV  134 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~  134 (138)
                                .|+|.+++.++.+.+-|+ +-||..+    .+.|+++
T Consensus       237 ----------~L~e~~arfYiaE~vlAI-~~iH~~gyIHRDIKPdNl  272 (550)
T KOG0605|consen  237 ----------TLTEDWARFYIAETVLAI-ESIHQLGYIHRDIKPDNL  272 (550)
T ss_pred             ----------cCchHHHHHHHHHHHHHH-HHHHHcCcccccCChhhe
Confidence                      699999999999999999 9999876    4457664

>KOG4278|consensus

Probab=98.47  E-value=2.3e-07  Score=85.81  Aligned_cols=75  Identities=19%  Similarity=0.241  Sum_probs=62.7

Q ss_pred             HHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccc-cccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPV-YASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSAS   93 (138)
Q Consensus        15 ~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V-~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (138)
                      ++.+.+|+.+|+.++|||+||++++.- ...-+||+|||+ +|.|-++|++..+.                         
T Consensus       307 veEFLkEAAvMKeikHpNLVqLLGVCT-~EpPFYIiTEfM~yGNLLdYLRecnr~-------------------------  360 (1157)
T KOG4278|consen  307 VEEFLKEAAVMKEIKHPNLVQLLGVCT-HEPPFYIITEFMCYGNLLDYLRECNRS-------------------------  360 (1157)
T ss_pred             HHHHHHHHHHHHhhcCccHHHHhhhhc-cCCCeEEEEecccCccHHHHHHHhchh-------------------------
Confidence            577789999999999999999999654 235799999997 79999999987653                         


Q ss_pred             CCcccccCCccHHHHHHHHHHHHHHHHhhhc
Q psy3822          94 RPTHAREYHFLDIEIKYGVAQVDSSEFTYLY  124 (138)
Q Consensus        94 ~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH  124 (138)
                              .+.-...-++.-||..|+ +||-
T Consensus       361 --------ev~avvLlyMAtQIsSaM-eYLE  382 (1157)
T KOG4278|consen  361 --------EVPAVVLLYMATQISSAM-EYLE  382 (1157)
T ss_pred             --------hcchhHHHHHHHHHHHHH-HHHH
Confidence                    355567778999999999 9874

>KOG4279|consensus

Probab=98.46  E-value=1.6e-07  Score=87.56  Aligned_cols=80  Identities=19%  Similarity=0.161  Sum_probs=68.1

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccc-cccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPV-YASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V-~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      ....+-|..||.+-++|||-|||++++.+-| +..+-+.||-| .|||.++|..+=                        
T Consensus       613 sr~~QPLhEEIaLH~~LrHkNIVrYLGs~se-nGf~kIFMEqVPGGSLSsLLrskW------------------------  667 (1226)
T KOG4279|consen  613 SREVQPLHEEIALHSTLRHKNIVRYLGSVSE-NGFFKIFMEQVPGGSLSSLLRSKW------------------------  667 (1226)
T ss_pred             chhhccHHHHHHHHHHHhhHhHHHHhhccCC-CCeEEEEeecCCCCcHHHHHHhcc------------------------
Confidence            3456889999999999999999999999876 56899999999 579999998542                        


Q ss_pred             CCCCCcccccCCc--cHHHHHHHHHHHHHHHHhhhcCCC
Q psy3822          91 SASRPTHAREYHF--LDIEIKYGVAQVDSSEFTYLYVPS  127 (138)
Q Consensus        91 ~~~~~~~~~~~~l--~E~eik~gl~QI~~aL~~fLH~~a  127 (138)
                                ++|  .|.-+.++-.||++|| .|||++.
T Consensus       668 ----------GPlKDNEstm~fYtkQILeGL-kYLHen~  695 (1226)
T KOG4279|consen  668 ----------GPLKDNESTMNFYTKQILEGL-KYLHENK  695 (1226)
T ss_pred             ----------CCCccchhHHHHHHHHHHHHh-hhhhhcc
Confidence                      134  5677889999999999 9999875

>KOG1095|consensus

Probab=98.43  E-value=8.7e-07  Score=84.59  Aligned_cols=88  Identities=14%  Similarity=0.078  Sum_probs=70.0

Q ss_pred             cchHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          10 RKETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPA   88 (138)
Q Consensus        10 ~~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (138)
                      .+++-...+-+|+.+|.++.|||||.+++..-+ ....++++||+. |+|.++|++...                     
T Consensus       734 ~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~-~~~~~i~leyM~gGDL~sflr~~r~---------------------  791 (1025)
T KOG1095|consen  734 SSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLD-SGPPLILLEYMEGGDLLSFLRESRP---------------------  791 (1025)
T ss_pred             CCHHHHHHHHHHHHHHhcCCCcceeeEEEeecC-CCCcEEEehhcccCcHHHHHHhccc---------------------
Confidence            335556777899999999999999999997665 678999999995 799999986421                     


Q ss_pred             CCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC
Q psy3822          89 NQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS  127 (138)
Q Consensus        89 ~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a  127 (138)
                             .......|+-.+.-.+..||++|. +||++..
T Consensus       792 -------~~~~~~~L~~~dLl~~a~dvA~G~-~YLe~~~  822 (1025)
T KOG1095|consen  792 -------APFQPSNLSMRDLLAFALDVAKGM-NYLESKH  822 (1025)
T ss_pred             -------ccCCCCCCCHHHHHHHHHHHhhhh-HHHHhCC
Confidence                   111123577788999999999999 9998753

>KOG0669|consensus

Probab=98.42  E-value=1.4e-07  Score=79.56  Aligned_cols=77  Identities=14%  Similarity=0.131  Sum_probs=64.2

Q ss_pred             HHHHHHHHHhhhCCCCCeeEEeceeee-------cCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          16 EILRLGVKQLEVYRHPKILSVLHPIEE-------CPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPA   88 (138)
Q Consensus        16 e~lrrEi~~L~rLrHPnIL~l~e~~ee-------~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (138)
                      ....||+.+|+.|+||||+.++|.+-.       ++.++|+|+.+|..+|+.+|.+..                      
T Consensus        61 italreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t~ylVf~~cehDLaGlLsn~~----------------------  118 (376)
T KOG0669|consen   61 ITALREIKILQLLKHENVVNLIEICRTKATPTNRDRATFYLVFDFCEHDLAGLLSNRK----------------------  118 (376)
T ss_pred             HHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccceeeeeHHHhhhhHHHHhcCcc----------------------
Confidence            345699999999999999999885431       123599999999999999998542                      


Q ss_pred             CCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC
Q psy3822          89 NQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS  127 (138)
Q Consensus        89 ~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a  127 (138)
                                  .+|+-.+||+.+.++.+|| .|+|.+.
T Consensus       119 ------------vr~sls~Ikk~Mk~Lm~GL-~~iHr~k  144 (376)
T KOG0669|consen  119 ------------VRFSLSEIKKVMKGLMNGL-YYIHRNK  144 (376)
T ss_pred             ------------ccccHHHHHHHHHHHHHHH-HHHHHhh
Confidence                        2688899999999999999 9999865

>KOG1027|consensus

Probab=98.41  E-value=5.8e-07  Score=84.12  Aligned_cols=92  Identities=17%  Similarity=0.167  Sum_probs=70.4

Q ss_pred             CcchHHHHHHHHHHHHhhhC-CCCCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCC
Q psy3822           9 KRKETVTEILRLGVKQLEVY-RHPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPP   87 (138)
Q Consensus         9 ~~~e~~~e~lrrEi~~L~rL-rHPnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~   87 (138)
                      +.-.+-.++..|||+.|+.- .|||||++|+ .|.++..+|++.|+|.++|.+++.....                    
T Consensus       540 rll~e~~~~A~rEi~lL~eSD~H~NviRyyc-~E~d~qF~YIalELC~~sL~dlie~~~~--------------------  598 (903)
T KOG1027|consen  540 RLLEEFFDFAQREIQLLQESDEHPNVIRYYC-SEQDRQFLYIALELCACSLQDLIESSGL--------------------  598 (903)
T ss_pred             HHhhHhHHHHHHHHHHHHhccCCCceEEEEe-eccCCceEEEEehHhhhhHHHHHhcccc--------------------
Confidence            33455678899999999886 5999999999 7777889999999999999999986310                    


Q ss_pred             CCCCCCCCcccccCC-ccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcc
Q psy3822          88 ANQSASRPTHAREYH-FLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSV  134 (138)
Q Consensus        88 ~~~~~~~~~~~~~~~-l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~  134 (138)
                                  +.. ....+....+.|+++|| +.||+-.    .+.|-+|
T Consensus       599 ------------d~~~~~~i~~~~~l~q~~~Gl-aHLHsl~iVHRDLkPQNI  637 (903)
T KOG1027|consen  599 ------------DVEMQSDIDPISVLSQIASGL-AHLHSLKIVHRDLKPQNI  637 (903)
T ss_pred             ------------chhhcccccHHHHHHHHHHHH-HHHHhcccccccCCCceE
Confidence                        001 11156777899999999 9999822    3346554

>KOG0576|consensus

Probab=98.37  E-value=3.8e-08  Score=90.58  Aligned_cols=80  Identities=19%  Similarity=0.166  Sum_probs=69.5

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      ..+..+.+||-+|+..|||||+.++...- .++.+|++||||. +||.++-.-.                          
T Consensus        54 dd~~~iqqei~~~~dc~h~nivay~gsyl-r~dklwicMEycgggslQdiy~~T--------------------------  106 (829)
T KOG0576|consen   54 DDFSGIQQEIGMLRDCRHPNIVAYFGSYL-RRDKLWICMEYCGGGSLQDIYHVT--------------------------  106 (829)
T ss_pred             ccccccccceeeeecCCCcChHHHHhhhh-hhcCcEEEEEecCCCcccceeeec--------------------------
Confidence            45678899999999999999999999886 4789999999996 6998876522                          


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCCCc
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPSTY  129 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a~~  129 (138)
                               ..|+|++|.+.....+.|| .|||+..+.
T Consensus       107 ---------gplselqiayvcRetl~gl-~ylhs~gk~  134 (829)
T KOG0576|consen  107 ---------GPLSELQIAYVCRETLQGL-KYLHSQGKI  134 (829)
T ss_pred             ---------ccchhHHHHHHHhhhhccc-hhhhcCCcc
Confidence                     2799999999999999999 999997743

>KOG0667|consensus

Probab=98.36  E-value=1.6e-06  Score=78.75  Aligned_cols=90  Identities=13%  Similarity=0.123  Sum_probs=76.2

Q ss_pred             HHHHHHHHHHHHhhhCC-CC-----CeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYR-HP-----KILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPP   86 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLr-HP-----nIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~   86 (138)
                      ...++-.-||.+|.+|+ |-     |||++++.|. -++++|+|+|.....|.++|++..-                   
T Consensus       224 ~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~-fr~HlciVfELL~~NLYellK~n~f-------------------  283 (586)
T KOG0667|consen  224 RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFY-FRNHLCIVFELLSTNLYELLKNNKF-------------------  283 (586)
T ss_pred             HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccc-cccceeeeehhhhhhHHHHHHhcCC-------------------
Confidence            45677788999999998 43     8999999887 5899999999999999999996532                   


Q ss_pred             CCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCC----CCcccCcceee
Q psy3822          87 PANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVP----STYLPSSVAFC  137 (138)
Q Consensus        87 ~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~----a~~~~~~~~~~  137 (138)
                                    ..|+-..|+.++.||+.|| .|||+.    +.|.|.+|.-|
T Consensus       284 --------------~Glsl~~ir~~~~Qil~~L-~~L~~l~IIHcDLKPENILL~  323 (586)
T KOG0667|consen  284 --------------RGLSLPLVRKFAQQILTAL-LFLHELGIIHCDLKPENILLK  323 (586)
T ss_pred             --------------CCCCHHHHHHHHHHHHHHH-HHHHhCCeeeccCChhheeec
Confidence                          1577889999999999999 999974    47778888765

>KOG0199|consensus

Probab=98.35  E-value=8.3e-07  Score=82.67  Aligned_cols=76  Identities=13%  Similarity=0.113  Sum_probs=62.8

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      +.+.+.+|+..|.+|+|||+|+||+.+-+  ..+.+|||.+. |||-+.|.+..+                         
T Consensus       154 ~mddflrEas~M~~L~H~hliRLyGvVl~--qp~mMV~ELaplGSLldrLrka~~-------------------------  206 (1039)
T KOG0199|consen  154 IMDDFLREASHMLKLQHPHLIRLYGVVLD--QPAMMVFELAPLGSLLDRLRKAKK-------------------------  206 (1039)
T ss_pred             hHHHHHHHHHHHHhccCcceeEEeeeecc--chhhHHhhhcccchHHHHHhhccc-------------------------
Confidence            77889999999999999999999997763  57999999985 799999986211                         


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcC
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYV  125 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~  125 (138)
                              ..|.-.....++.||++|+ +||-.
T Consensus       207 --------~~llv~~Lcdya~QiA~aM-~YLes  230 (1039)
T KOG0199|consen  207 --------AILLVSRLCDYAMQIAKAM-QYLES  230 (1039)
T ss_pred             --------cceeHHHHHHHHHHHHHHH-HHHhh
Confidence                    1355567778999999999 99854

>KOG1151|consensus

Probab=98.33  E-value=1.6e-06  Score=77.80  Aligned_cols=83  Identities=16%  Similarity=0.122  Sum_probs=72.0

Q ss_pred             cchHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccccc-cHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          10 RKETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYA-SLASILAFQESPAPNHSTNPVTGGSGSSPPPA   88 (138)
Q Consensus        10 ~~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~~-sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (138)
                      .++...+..-||-.+-+.|.||.||.+|+-|--+.+++|-|+|||.| +|-=+|+...                      
T Consensus       506 KKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtdsFCTVLEYceGNDLDFYLKQhk----------------------  563 (775)
T KOG1151|consen  506 KKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSFCTVLEYCEGNDLDFYLKQHK----------------------  563 (775)
T ss_pred             hhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccccceeeeeecCCCchhHHHHhhh----------------------
Confidence            44666778889999999999999999999887667899999999975 8888887543                      


Q ss_pred             CCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCCC
Q psy3822          89 NQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPST  128 (138)
Q Consensus        89 ~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a~  128 (138)
                                   -++|.|++.++.||+.|| .||.+...
T Consensus       564 -------------lmSEKEARSIiMQiVnAL-~YLNEikp  589 (775)
T KOG1151|consen  564 -------------LMSEKEARSIIMQIVNAL-KYLNEIKP  589 (775)
T ss_pred             -------------hhhHHHHHHHHHHHHHHH-HHHhccCC
Confidence                         489999999999999999 99998763

>KOG0579|consensus

Probab=98.31  E-value=6.3e-07  Score=83.10  Aligned_cols=80  Identities=18%  Similarity=0.103  Sum_probs=68.2

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      ++-++-+.=||.+|..+.||+||.++..+.- .+.||+..|||. |-.-+++-+-++                       
T Consensus        70 eEELEDylVEIeILa~CdHP~ivkLl~ayy~-enkLwiliEFC~GGAVDaimlEL~r-----------------------  125 (1187)
T KOG0579|consen   70 EEELEDYLVEIEILAECDHPVIVKLLSAYYF-ENKLWILIEFCGGGAVDAIMLELGR-----------------------  125 (1187)
T ss_pred             hhHHhhhhhhhhhhhcCCChHHHHHHHHHhc-cCceEEEEeecCCchHhHHHHHhcc-----------------------
Confidence            4566777889999999999999999997653 467999999996 577777775542                       


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS  127 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a  127 (138)
                                 .|.|..|+....|+++|| .|||++.
T Consensus       126 -----------~LtE~QIqvvc~q~ldAL-n~LHs~~  150 (1187)
T KOG0579|consen  126 -----------VLTEDQIQVVCYQVLDAL-NWLHSQN  150 (1187)
T ss_pred             -----------ccchHHHHHHHHHHHHHH-HHHhhcc
Confidence                       699999999999999999 9999865

>KOG2345|consensus

Probab=98.30  E-value=2e-06  Score=72.03  Aligned_cols=92  Identities=10%  Similarity=0.053  Sum_probs=73.9

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEece--ee--ecCCeEEEEeccc-cccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHP--IE--ECPDALAFATEPV-YASLASILAFQESPAPNHSTNPVTGGSGSSPPP   87 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~--~e--e~~~~L~fVtE~V-~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~   87 (138)
                      +-.+..+|||..-+++.||||+++++-  .+  +++...|++..|- .|||.+.+.....                    
T Consensus        60 ~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~yll~Pyy~~Gsl~d~i~~~k~--------------------  119 (302)
T KOG2345|consen   60 EDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAYLLLPYYKRGSLLDEIERLKI--------------------  119 (302)
T ss_pred             HHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEEEEeehhccccHHHHHHHHhh--------------------
Confidence            456888999999999999999999763  22  2345799999987 4899999986542                    


Q ss_pred             CCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC------CcccCccee
Q psy3822          88 ANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS------TYLPSSVAF  136 (138)
Q Consensus        88 ~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a------~~~~~~~~~  136 (138)
                                 ++..++|.++-+++++|++|| ++||+..      ...|+++-+
T Consensus       120 -----------kg~~~sE~~iL~if~gic~gL-~~lH~~~~~yAH~DiKP~NILl  162 (302)
T KOG2345|consen  120 -----------KGNFVSEAQILWIFLGICRGL-EALHEKEPPYAHRDIKPANILL  162 (302)
T ss_pred             -----------cCCccCHHHHHHHHHHHHHHH-HHHhccCCcccccCCCcceeEe
Confidence                       234799999999999999999 9999877      456887754

>KOG0596|consensus

Probab=98.29  E-value=3.9e-06  Score=76.29  Aligned_cols=92  Identities=17%  Similarity=0.106  Sum_probs=75.8

Q ss_pred             CcchHHHHHHHHHHHHhhhCC-CCCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCC
Q psy3822           9 KRKETVTEILRLGVKQLEVYR-HPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPP   87 (138)
Q Consensus         9 ~~~e~~~e~lrrEi~~L~rLr-HPnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~   87 (138)
                      ...+..++-++.||..|.||+ |-+|+++++ .|-+.+.||+|||+=..+|..+|.++..                    
T Consensus       397 ~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~D-YEv~d~~lYmvmE~Gd~DL~kiL~k~~~--------------------  455 (677)
T KOG0596|consen  397 EADNQTLDGYRNEIALLNKLKGHDKIIQLYD-YEVTDGYLYMVMECGDIDLNKILKKKKS--------------------  455 (677)
T ss_pred             hcCHHHHHHHHHHHHHHHHhcCCceEEEEee-eeccCceEEEEeecccccHHHHHHhccC--------------------
Confidence            456788999999999999996 999999999 6657789999999888899999997642                    


Q ss_pred             CCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          88 ANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        88 ~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                    .+..-.++.+..|++.|+ .++|+..    .+.|-+..|
T Consensus       456 --------------~~~~~~lk~ywkqML~aV-~~IH~~gIVHSDLKPANFLl  493 (677)
T KOG0596|consen  456 --------------IDPDWFLKFYWKQMLLAV-KTIHQHGIVHSDLKPANFLL  493 (677)
T ss_pred             --------------CCchHHHHHHHHHHHHHH-HHHHHhceeecCCCcccEEE
Confidence                          233348999999999999 9999854    566665543

>KOG0690|consensus

Probab=98.28  E-value=3.3e-07  Score=79.62  Aligned_cols=71  Identities=23%  Similarity=0.207  Sum_probs=59.9

Q ss_pred             HHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccc-cccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccc
Q psy3822          20 LGVKQLEVYRHPKILSVLHPIEECPDALAFATEPV-YASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASRPTHA   98 (138)
Q Consensus        20 rEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V-~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   98 (138)
                      .|-..|+..|||.+..+.-+|. +.++|||||||+ .|.|+--|...                                 
T Consensus       217 TE~RVL~~~~HPFLt~LKYsFQ-t~drlCFVMeyanGGeLf~HLsre---------------------------------  262 (516)
T KOG0690|consen  217 TENRVLQNCRHPFLTSLKYSFQ-TQDRLCFVMEYANGGELFFHLSRE---------------------------------  262 (516)
T ss_pred             hHHHHHHhccCcHHHHhhhhhc-cCceEEEEEEEccCceEeeehhhh---------------------------------
Confidence            3456788899999999999887 789999999999 57887666532                                 


Q ss_pred             ccCCccHHHHHHHHHHHHHHHHhhhcCCC
Q psy3822          99 REYHFLDIEIKYGVAQVDSSEFTYLYVPS  127 (138)
Q Consensus        99 ~~~~l~E~eik~gl~QI~~aL~~fLH~~a  127 (138)
                        ..|+|...+.+-..|..|| .|||+..
T Consensus       263 --r~FsE~RtRFYGaEIvsAL-~YLHs~~  288 (516)
T KOG0690|consen  263 --RVFSEDRTRFYGAEIVSAL-GYLHSRN  288 (516)
T ss_pred             --hcccchhhhhhhHHHHHHh-hhhhhCC
Confidence              2699999999999999999 9999864

>KOG0201|consensus

Probab=98.27  E-value=9.5e-08  Score=84.15  Aligned_cols=81  Identities=17%  Similarity=0.090  Sum_probs=69.4

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      +..++.+.+|+..|..+++|||.++|..+-. +..||++|||+. |++.++|+-.                         
T Consensus        52 ~deIediqqei~~Ls~~~~~~it~yygsyl~-g~~LwiiMey~~gGsv~~lL~~~-------------------------  105 (467)
T KOG0201|consen   52 EDEIEDIQQEISVLSQCDSPNITEYYGSYLK-GTKLWIIMEYCGGGSVLDLLKSG-------------------------  105 (467)
T ss_pred             chhhHHHHHHHHHHHhcCcchHHhhhhheee-cccHHHHHHHhcCcchhhhhccC-------------------------
Confidence            3445677999999999999999999998874 678999999995 7999999732                         


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCCCc
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPSTY  129 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a~~  129 (138)
                                ..++|.+|...+.+++.|| .|||...+.
T Consensus       106 ----------~~~~E~~i~~ilre~l~~l-~ylH~~~ki  133 (467)
T KOG0201|consen  106 ----------NILDEFEIAVILREVLKGL-DYLHSEKKI  133 (467)
T ss_pred             ----------CCCccceeeeehHHHHHHh-hhhhhccee
Confidence                      2468999999999999999 999987744

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=98.25  E-value=2.1e-06  Score=66.46  Aligned_cols=83  Identities=12%  Similarity=0.005  Sum_probs=55.8

Q ss_pred             HHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccccc-cHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYA-SLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSAS   93 (138)
Q Consensus        15 ~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~~-sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (138)
                      .+..++|++.|.+|.||+|.. ..++.. .+ -+|||||+.+ ++...+..                             
T Consensus        63 ~~~~~~E~~~l~~l~~~~v~~-p~~~~~-~~-~~iVmE~i~g~~l~~~~~~-----------------------------  110 (190)
T cd05147          63 RTWAEKEMRNLKRLVTAGIPC-PEPILL-KS-HVLVMEFIGDDGWAAPRLK-----------------------------  110 (190)
T ss_pred             HHHHHHHHHHHHHHHHCCCCC-CcEEEe-cC-CEEEEEEeCCCCCcchhhh-----------------------------
Confidence            345577999999999888743 222332 22 3899999975 44332211                             


Q ss_pred             CCcccccCCccHHHHHHHHHHHHHHHHhhhcCCCCc-----ccCccee
Q psy3822          94 RPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPSTY-----LPSSVAF  136 (138)
Q Consensus        94 ~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a~~-----~~~~~~~  136 (138)
                            ...+++.++...+.||+.+| .|+|...++     -|+++.+
T Consensus       111 ------~~~~~~~~~~~i~~qi~~~L-~~l~H~~giiHrDlkP~NIli  151 (190)
T cd05147         111 ------DAPLSESKARELYLQVIQIM-RILYQDCRLVHADLSEYNLLY  151 (190)
T ss_pred             ------cCCCCHHHHHHHHHHHHHHH-HHHHHhCCcccCCCCHHHEEE
Confidence                  12578889999999999999 999533333     4777654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>PRK09188 serine/threonine protein kinase; Provisional

Probab=98.22  E-value=4.1e-06  Score=71.99  Aligned_cols=77  Identities=8%  Similarity=-0.040  Sum_probs=55.5

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeE-EeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILS-VLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPAN   89 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~-l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (138)
                      +...+.+++|+.+|++|+||||+. +++     .+..|+|||||. ++|.. +.  .                       
T Consensus        62 ~~~~~~~~~E~~iL~~L~h~~iv~~l~~-----~~~~~LVmE~~~G~~L~~-~~--~-----------------------  110 (365)
T PRK09188         62 PLARHLAAREIRALKTVRGIGVVPQLLA-----TGKDGLVRGWTEGVPLHL-AR--P-----------------------  110 (365)
T ss_pred             HHHHHHHHHHHHHHHhccCCCCCcEEEE-----cCCcEEEEEccCCCCHHH-hC--c-----------------------
Confidence            345677999999999999999985 443     235899999996 47752 11  0                       


Q ss_pred             CCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----Cc-ccCccee
Q psy3822          90 QSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TY-LPSSVAF  136 (138)
Q Consensus        90 ~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~-~~~~~~~  136 (138)
                                   ..   ...++.|+++|| .|||+..    .+ .|+++.+
T Consensus       111 -------------~~---~~~~~~~i~~aL-~~lH~~gIiHrDL~KP~NILv  145 (365)
T PRK09188        111 -------------HG---DPAWFRSAHRAL-RDLHRAGITHNDLAKPQNWLM  145 (365)
T ss_pred             -------------cc---hHHHHHHHHHHH-HHHHHCCCeeCCCCCcceEEE
Confidence                         00   135688999999 9999854    45 5887764

>KOG0200|consensus

Probab=98.20  E-value=5.1e-06  Score=75.02  Aligned_cols=98  Identities=15%  Similarity=0.145  Sum_probs=72.9

Q ss_pred             CcchHHHHHHHHHHHHhhhC-CCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCC
Q psy3822           9 KRKETVTEILRLGVKQLEVY-RHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPP   86 (138)
Q Consensus         9 ~~~e~~~e~lrrEi~~L~rL-rHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~   86 (138)
                      ...+...+.+.+|+..|..+ +|||||.+++.+-+ +..+++|+||+. |+|.++|.......     +. .+.+    .
T Consensus       339 ~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~-~~~~~~v~Ey~~~G~L~~~Lr~~r~~~-----~~-~~~~----~  407 (609)
T KOG0200|consen  339 NASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQ-DGPLYVIVEYAEHGDLLEFLRKKRVTE-----SI-DGSG----V  407 (609)
T ss_pred             ccCcHHHHHHHHHHHHHHHhcCCcchhhheeeecc-CCceEEEEEeccCCcHHHHHHhccccc-----cc-cccC----C
Confidence            34446678899999999998 59999999998765 678999999995 89999998665100     00 0000    1


Q ss_pred             CCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC
Q psy3822          87 PANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS  127 (138)
Q Consensus        87 ~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a  127 (138)
                      ..+.+         ..|+..+.-.+..||+.|+ +||++..
T Consensus       408 ~~~~~---------~~L~~~dLlsfa~QIa~GM-e~L~~~~  438 (609)
T KOG0200|consen  408 FPNER---------DALTTKDLLSFAYQIANGM-EYLASVP  438 (609)
T ss_pred             Ccccc---------CCcCHHHHHHHHHHHHHHH-HHHhhCC
Confidence            11110         2488899999999999999 9998765

>KOG1290|consensus

Probab=98.19  E-value=6.5e-06  Score=73.98  Aligned_cols=99  Identities=19%  Similarity=0.225  Sum_probs=79.3

Q ss_pred             ccCCCCcchHHHHHHHHHHHHhhhCC-----CC---CeeEEeceeeecC---CeEEEEeccccccHHHHHhhcCCCCCCC
Q psy3822           4 KLHKPKRKETVTEILRLGVKQLEVYR-----HP---KILSVLHPIEECP---DALAFATEPVYASLASILAFQESPAPNH   72 (138)
Q Consensus         4 k~~K~~~~e~~~e~lrrEi~~L~rLr-----HP---nIL~l~e~~ee~~---~~L~fVtE~V~~sL~~~L~~~~~~~~~~   72 (138)
                      ||.|.  .+...+....||++|+++|     ||   .||+|++-|.-+.   .++++|+|+....|-.++.+..-.    
T Consensus       109 KVvKS--AqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGpNG~HVCMVfEvLGdnLLklI~~s~Yr----  182 (590)
T KOG1290|consen  109 KVVKS--AQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGPNGQHVCMVFEVLGDNLLKLIKYSNYR----  182 (590)
T ss_pred             EEEeh--hhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCCCCcEEEEEehhhhhHHHHHHHHhCCC----
Confidence            45552  2456788899999999985     44   5999999888654   389999999999999999865421    


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCCCcc-----cCcceeeC
Q psy3822          73 STNPVTGGSGSSPPPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPSTYL-----PSSVAFCI  138 (138)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a~~~-----~~~~~~~~  138 (138)
                                                   .+.-..||.+..||+.|| .|||...+.|     |.+|..|+
T Consensus       183 -----------------------------Glpl~~VK~I~~qvL~GL-dYLH~ecgIIHTDlKPENvLl~~  223 (590)
T KOG1290|consen  183 -----------------------------GLPLSCVKEICRQVLTGL-DYLHRECGIIHTDLKPENVLLCS  223 (590)
T ss_pred             -----------------------------CCcHHHHHHHHHHHHHHH-HHHHHhcCccccCCCcceeeeec
Confidence                                         366679999999999999 9999988765     88888875

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=98.17  E-value=5.1e-06  Score=63.60  Aligned_cols=84  Identities=13%  Similarity=-0.042  Sum_probs=59.2

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccccc-H-HHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYAS-L-ASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~~s-L-~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      .+...+++|...|.+|+||+|..... +....  -+|||||+.+. + ...+..                          
T Consensus        61 ~~~~~~~~E~~~l~~l~~~~i~~p~~-~~~~~--~~lVmE~~~g~~~~~~~l~~--------------------------  111 (190)
T cd05145          61 LVFAWAEKEFRNLKRLYEAGVPVPEP-ILLKK--NVLVMEFIGDDGSPAPRLKD--------------------------  111 (190)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCCceE-EEecC--CEEEEEEecCCCchhhhhhh--------------------------
Confidence            34566789999999999999843332 33222  48999999753 3 222321                          


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCCCc-----ccCccee
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPSTY-----LPSSVAF  136 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a~~-----~~~~~~~  136 (138)
                                ..+++.++...+.|++++| .++|...++     -|.+|.+
T Consensus       112 ----------~~~~~~~~~~i~~~l~~~l-~~lH~~~givHrDlkP~NIll  151 (190)
T cd05145         112 ----------VPLEEEEAEELYEQVVEQM-RRLYQEAGLVHGDLSEYNILY  151 (190)
T ss_pred             ----------ccCCHHHHHHHHHHHHHHH-HHHHHhCCEecCCCChhhEEE
Confidence                      2467788999999999999 999984444     4777764

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>KOG0193|consensus

Probab=98.17  E-value=3.7e-06  Score=76.79  Aligned_cols=81  Identities=22%  Similarity=0.131  Sum_probs=69.3

Q ss_pred             cchHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccccc-cHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          10 RKETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYA-SLASILAFQESPAPNHSTNPVTGGSGSSPPPA   88 (138)
Q Consensus        10 ~~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~~-sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (138)
                      ..++.++.+|+||..|++=||-|||=+.+.+-  ++.+++||-+|.| ||...|+-.+                      
T Consensus       427 pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~--~p~~AIiTqwCeGsSLY~hlHv~e----------------------  482 (678)
T KOG0193|consen  427 PTPEQLQAFKNEVAVLKKTRHENILLFMGACM--NPPLAIITQWCEGSSLYTHLHVQE----------------------  482 (678)
T ss_pred             CCHHHHHHHHHHHHHHhhcchhhheeeehhhc--CCceeeeehhccCchhhhhccchh----------------------
Confidence            34568899999999999999999999999774  5677999999975 9999997432                      


Q ss_pred             CCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC
Q psy3822          89 NQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS  127 (138)
Q Consensus        89 ~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a  127 (138)
                                  ..|+--.+..+..||++|+ .|||...
T Consensus       483 ------------tkfdm~~~idIAqQiaqGM-~YLHAK~  508 (678)
T KOG0193|consen  483 ------------TKFDMNTTIDIAQQIAQGM-DYLHAKN  508 (678)
T ss_pred             ------------hhhhHHHHHHHHHHHHHhh-hhhhhhh
Confidence                        3688888999999999999 9999754

>KOG0665|consensus

Probab=98.10  E-value=2.1e-06  Score=73.69  Aligned_cols=84  Identities=17%  Similarity=0.187  Sum_probs=69.7

Q ss_pred             HHHHHHHHHHhhhCCCCCeeEEeceeeecC-----CeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVYRHPKILSVLHPIEECP-----DALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPAN   89 (138)
Q Consensus        15 ~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~-----~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (138)
                      -.+.-||...|.-+.|+||+.+++.|--.+     ..+|+|||++.++|.+++..                         
T Consensus        59 akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y~v~e~m~~nl~~vi~~-------------------------  113 (369)
T KOG0665|consen   59 AKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVYLVMELMDANLCQVILM-------------------------  113 (369)
T ss_pred             chhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHHHHHHhhhhHHHHHHHH-------------------------
Confidence            356679999999999999999999764211     15899999999999999872                         


Q ss_pred             CCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          90 QSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        90 ~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                  +++-..+++.++|++-|+ ++||+..    .++|++++-
T Consensus       114 ------------elDH~tis~i~yq~~~~i-k~lhs~~IihRdLkPsnivv  151 (369)
T KOG0665|consen  114 ------------ELDHETISYILYQMLCGI-KHLHSAGIIHRDLKPSNIVV  151 (369)
T ss_pred             ------------hcchHHHHHHHHHHHHHH-HHHHhcceeecccCccccee
Confidence                        466678999999999999 9999866    478998763

>KOG0587|consensus

Probab=98.06  E-value=1.8e-05  Score=74.78  Aligned_cols=78  Identities=17%  Similarity=0.162  Sum_probs=64.7

Q ss_pred             HHHHHHHHHhhhC-CCCCeeEEeceeeec----CCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          16 EILRLGVKQLEVY-RHPKILSVLHPIEEC----PDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPAN   89 (138)
Q Consensus        16 e~lrrEi~~L~rL-rHPnIL~l~e~~ee~----~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (138)
                      +.+.-|..+|+.+ .|||+..+|..+.-.    .|.||||||||. ||.-|++++..                       
T Consensus        60 eEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~-----------------------  116 (953)
T KOG0587|consen   60 EEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLWLVMEFCGGGSVTDLVKNTK-----------------------  116 (953)
T ss_pred             HHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEEEEeeccCCccHHHHHhhhc-----------------------
Confidence            5557788888877 599999999876532    258999999995 79999998532                       


Q ss_pred             CCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC
Q psy3822          90 QSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS  127 (138)
Q Consensus        90 ~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a  127 (138)
                                +.+++|.-|.|++..++.|| ..||++.
T Consensus       117 ----------g~rl~E~~IaYI~re~lrgl-~HLH~nk  143 (953)
T KOG0587|consen  117 ----------GNRLKEEWIAYILREILRGL-AHLHNNK  143 (953)
T ss_pred             ----------ccchhhHHHHHHHHHHHHHH-HHHhhcc
Confidence                      34799999999999999999 9999875

>KOG1025|consensus

Probab=98.04  E-value=2.2e-06  Score=81.00  Aligned_cols=75  Identities=15%  Similarity=0.127  Sum_probs=61.7

Q ss_pred             HHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccc-cccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPV-YASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSAS   93 (138)
Q Consensus        15 ~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V-~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (138)
                      .+.+.+|+-.|.+|+|||+++++.....  +.+.+||+++ .|+|.|++++...                          
T Consensus       742 s~e~LdeAl~masldHpnl~RLLgvc~~--s~~qlvtq~mP~G~LlDyvr~hr~--------------------------  793 (1177)
T KOG1025|consen  742 SIELLDEALRMASLDHPNLLRLLGVCML--STLQLVTQLMPLGCLLDYVREHRD--------------------------  793 (1177)
T ss_pred             hHHHHHHHHHHhcCCCchHHHHhhhccc--chHHHHHHhcccchHHHHHHHhhc--------------------------
Confidence            4667889999999999999999996542  3499999999 5899999987432                          


Q ss_pred             CCcccccCCccHHHHHHHHHHHHHHHHhhhcCC
Q psy3822          94 RPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVP  126 (138)
Q Consensus        94 ~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~  126 (138)
                              .+--.+.-.|..||++|+ .|||+.
T Consensus       794 --------~igsq~lLnw~~QIAkgM-~YLe~q  817 (1177)
T KOG1025|consen  794 --------NIGSQDLLNWCYQIAKGM-KYLEEQ  817 (1177)
T ss_pred             --------cccHHHHHHHHHHHHHHH-HHHHhc
Confidence                    344457778999999999 999964

>KOG0608|consensus

Probab=98.04  E-value=1.7e-05  Score=73.71  Aligned_cols=83  Identities=11%  Similarity=0.129  Sum_probs=71.0

Q ss_pred             HHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccc-cccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          16 EILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPV-YASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASR   94 (138)
Q Consensus        16 e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V-~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (138)
                      -.++-|-.+|+.-..+=||+||-.|.+ ++.|||||+|| .|++-++|-+.+                            
T Consensus       674 aHVKAERDILAEADn~WVVrLyySFQD-kdnLYFVMdYIPGGDmMSLLIrmg----------------------------  724 (1034)
T KOG0608|consen  674 AHVKAERDILAEADNEWVVRLYYSFQD-KDNLYFVMDYIPGGDMMSLLIRMG----------------------------  724 (1034)
T ss_pred             hhhhhhhhhHhhcCCcceEEEEEEecc-CCceEEEEeccCCccHHHHHHHhc----------------------------
Confidence            456888899999999999999999984 88999999999 579999997654                            


Q ss_pred             CcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcce
Q psy3822          95 PTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVA  135 (138)
Q Consensus        95 ~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~  135 (138)
                             -|.|.-++.++..|+-|+ ++.|.-.    .+.|+++.
T Consensus       725 -------IFeE~LARFYIAEltcAi-esVHkmGFIHRDiKPDNIL  761 (1034)
T KOG0608|consen  725 -------IFEEDLARFYIAELTCAI-ESVHKMGFIHRDIKPDNIL  761 (1034)
T ss_pred             -------cCHHHHHHHHHHHHHHHH-HHHHhccceecccCccceE
Confidence                   588999999999999999 9999744    45687764

>PLN00181 protein SPA1-RELATED; Provisional

Probab=98.01  E-value=2.7e-06  Score=78.05  Aligned_cols=77  Identities=18%  Similarity=0.036  Sum_probs=60.9

Q ss_pred             hhhCCC-CCeeEEeceeee------cCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcc
Q psy3822          25 LEVYRH-PKILSVLHPIEE------CPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASRPTH   97 (138)
Q Consensus        25 L~rLrH-PnIL~l~e~~ee------~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   97 (138)
                      +++++| +||+++++.+..      ..+.+++++|+...+|.++|....                               
T Consensus        26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~L~~~l~~~~-------------------------------   74 (793)
T PLN00181         26 SKSLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECEDVSLRQWLDNPD-------------------------------   74 (793)
T ss_pred             cchhhHHHHHHHhhcccCCccccccccchhhhhhccCCccHHHHHhccc-------------------------------
Confidence            456788 788888887721      124689999999899999997422                               


Q ss_pred             cccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          98 AREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        98 ~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                         ..+++.++++++.||++|| .|||+..    .+.|++|.+
T Consensus        75 ---~~~~~~~~~~i~~qi~~al-~~lH~~gIvHrDlKP~NiLl  113 (793)
T PLN00181         75 ---RSVDAFECFHVFRQIVEIV-NAAHSQGIVVHNVRPSCFVM  113 (793)
T ss_pred             ---ccccHHHHHHHHHHHHHHH-HHHHhCCeeeccCCchhEEE
Confidence               1589999999999999999 9999754    456988876

>PRK14879 serine/threonine protein kinase; Provisional

Probab=97.98  E-value=2.2e-05  Score=59.68  Aligned_cols=80  Identities=11%  Similarity=0.000  Sum_probs=60.5

Q ss_pred             HHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          16 EILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASR   94 (138)
Q Consensus        16 e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (138)
                      +.+.+|+.+|.+|+||+|....-... +.+..+++|||+. .+|.+++...                             
T Consensus        44 ~~~~~E~~~l~~l~~~~i~~p~~~~~-~~~~~~lv~e~~~G~~L~~~~~~~-----------------------------   93 (211)
T PRK14879         44 ERTRREARIMSRARKAGVNVPAVYFV-DPENFIIVMEYIEGEPLKDLINSN-----------------------------   93 (211)
T ss_pred             HHHHHHHHHHHHHHHCCCCCCeEEEE-eCCCCEEEEEEeCCcCHHHHHHhc-----------------------------
Confidence            46789999999999998765444233 3457899999996 5999988621                             


Q ss_pred             CcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          95 PTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        95 ~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                               .. +....+.||+.+| .++|+..    .+-|+++.+
T Consensus        94 ---------~~-~~~~i~~~i~~~l-~~lH~~~i~H~Dl~p~Nil~  128 (211)
T PRK14879         94 ---------GM-EELELSREIGRLV-GKLHSAGIIHGDLTTSNMIL  128 (211)
T ss_pred             ---------cH-HHHHHHHHHHHHH-HHHHhCCcccCCCCcccEEE
Confidence                     11 6778899999999 9999754    455777765

>smart00090 RIO RIO-like kinase

Probab=97.94  E-value=1.6e-05  Score=63.82  Aligned_cols=85  Identities=12%  Similarity=-0.048  Sum_probs=57.9

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccccc-cHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYA-SLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~~-sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      .+...+++|+.+|.+|.|. ++.+..++..+  ..+|||||+.+ +|...+..                           
T Consensus        92 ~~~~~~~~E~~~L~~L~~~-~i~~p~~~~~~--~~~lV~E~~~g~~L~~~~~~---------------------------  141 (237)
T smart00090       92 LVRLWAEKEFRNLQRLYEA-GVPVPKPIAWR--RNVLVMEFIGGDGLPAPRLK---------------------------  141 (237)
T ss_pred             HHHHHHHHHHHHHHHHHhc-CCCCCeeeEec--CceEEEEEecCCcccccccc---------------------------
Confidence            3445678999999999763 34444444432  34899999976 55443311                           


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCCCc-----ccCccee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPSTY-----LPSSVAF  136 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a~~-----~~~~~~~  136 (138)
                              ...+++.++...+.||+++| +|||+..+.     -|++|.+
T Consensus       142 --------~~~~~~~~~~~i~~qi~~~l-~~LH~~g~iiH~Dikp~NIli  182 (237)
T smart00090      142 --------DVEPEEEEEFELYDDILEEM-RKLYKEGELVHGDLSEYNILV  182 (237)
T ss_pred             --------cCCcchHHHHHHHHHHHHHH-HHHHhcCCEEeCCCChhhEEE
Confidence                    11355667889999999999 999987733     3777654

>PHA02882 putative serine/threonine kinase; Provisional

Probab=97.91  E-value=4.4e-05  Score=61.04  Aligned_cols=80  Identities=11%  Similarity=-0.079  Sum_probs=57.9

Q ss_pred             HHHHhhhCCCCCeeEEeceeeecCC---eEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcc
Q psy3822          21 GVKQLEVYRHPKILSVLHPIEECPD---ALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASRPTH   97 (138)
Q Consensus        21 Ei~~L~rLrHPnIL~l~e~~ee~~~---~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   97 (138)
                      +...+..+.||||+++++.......   ..++++|++..++.+++....                               
T Consensus        73 ~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------  121 (294)
T PHA02882         73 LWKNIHNIDHLGIPKYYGCGSFKRCRMYYRFILLEKLVENTKEIFKRIK-------------------------------  121 (294)
T ss_pred             HHHHhccCCCCCCCcEEEeeeEecCCceEEEEEEehhccCHHHHHHhhc-------------------------------
Confidence            3345566899999999985443222   457889988778887776432                               


Q ss_pred             cccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          98 AREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        98 ~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                          .+++..++.++.||++|| +|||+..    .+.|+++.+
T Consensus       122 ----~~~~~~~~~i~~qi~~~l-~~lH~~~iiHrDiKp~Nill  159 (294)
T PHA02882        122 ----CKNKKLIKNIMKDMLTTL-EYIHEHGISHGDIKPENIMV  159 (294)
T ss_pred             ----cCCHHHHHHHHHHHHHHH-HHHHhCCeecCCCCHHHEEE
Confidence                346678899999999999 9999854    344777654

>KOG0196|consensus

Probab=97.89  E-value=3e-05  Score=72.96  Aligned_cols=78  Identities=18%  Similarity=0.166  Sum_probs=63.3

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      ..--.+..|+++|-...||||++|.+++- ..+-+.++|||+. |+|-.+|++.+                         
T Consensus       672 kqrrdFL~EAsIMGQFdHPNIIrLEGVVT-ks~PvMIiTEyMENGsLDsFLR~~D-------------------------  725 (996)
T KOG0196|consen  672 KQRRDFLSEASIMGQFDHPNIIRLEGVVT-KSKPVMIITEYMENGSLDSFLRQND-------------------------  725 (996)
T ss_pred             HHHhhhhhhhhhcccCCCCcEEEEEEEEe-cCceeEEEhhhhhCCcHHHHHhhcC-------------------------
Confidence            33445678999999999999999999664 3468999999996 89999999664                         


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCC
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVP  126 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~  126 (138)
                               ..|+-+++--++.-|+.|+ .||-+-
T Consensus       726 ---------GqftviQLVgMLrGIAsGM-kYLsdm  750 (996)
T KOG0196|consen  726 ---------GQFTVIQLVGMLRGIASGM-KYLSDM  750 (996)
T ss_pred             ---------CceEeehHHHHHHHHHHHh-HHHhhc
Confidence                     2466677778899999999 998553

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=97.87  E-value=5.3e-05  Score=66.96  Aligned_cols=77  Identities=17%  Similarity=0.058  Sum_probs=58.7

Q ss_pred             HHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSAS   93 (138)
Q Consensus        15 ~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (138)
                      .+.+++|+.+|.+|+||+|...+.... +.+..++||||+. ++|.+++.                              
T Consensus       380 ~~~~~~E~~~l~~l~~~~i~~p~~~~~-~~~~~~lv~E~~~g~~L~~~l~------------------------------  428 (535)
T PRK09605        380 TERTRAEARLLSEARRAGVPTPVIYDV-DPEEKTIVMEYIGGKDLKDVLE------------------------------  428 (535)
T ss_pred             HHHHHHHHHHHHhhcccCCCeeEEEEE-eCCCCEEEEEecCCCcHHHHHH------------------------------
Confidence            467899999999999999887654333 3456889999996 58888775                              


Q ss_pred             CCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          94 RPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        94 ~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                   .....+.||+++| .|||+..    .+.|++|.+
T Consensus       429 -------------~~~~~~~~i~~~L-~~lH~~giiHrDlkp~NILl  461 (535)
T PRK09605        429 -------------GNPELVRKVGEIV-AKLHKAGIVHGDLTTSNFIV  461 (535)
T ss_pred             -------------HHHHHHHHHHHHH-HHHHhCCCccCCCChHHEEE
Confidence                         1234788999999 9999854    455777654

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=97.86  E-value=0.00023  Score=52.73  Aligned_cols=80  Identities=21%  Similarity=0.185  Sum_probs=65.7

Q ss_pred             HHHHHHHHHHHhhhCCCC-CeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHP-KILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHP-nIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      ..+.+.+|++.+++++|| +|+.+++.+ .+....++++|++. +++.+++......                       
T Consensus        40 ~~~~~~~e~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~-----------------------   95 (384)
T COG0515          40 EVERFLREIQILASLNHPPNIVKLYDFF-QDEGSLYLVMEYVDGGSLEDLLKKIGRK-----------------------   95 (384)
T ss_pred             HHHHHHHHHHHHHHccCCcceeeEEEEE-ecCCEEEEEEecCCCCcHHHHHHhcccc-----------------------
Confidence            567889999999999999 799999977 45667999999996 6888666633210                       


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS  127 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a  127 (138)
                               ..+.+.++..++.|++.++ .|+|...
T Consensus        96 ---------~~~~~~~~~~~~~~~~~~l-~~~H~~~  121 (384)
T COG0515          96 ---------GPLSESEALFILAQILSAL-EYLHSKG  121 (384)
T ss_pred             ---------cCCCHHHHHHHHHHHHHHH-HHHHhCC
Confidence                     2588899999999999999 9999766

>KOG0603|consensus

Probab=97.81  E-value=3.6e-05  Score=70.25  Aligned_cols=80  Identities=15%  Similarity=0.102  Sum_probs=59.0

Q ss_pred             HHHHHHhhhC-CCCCeeEEeceeeecCCeEEEEeccccc-cHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q psy3822          19 RLGVKQLEVY-RHPKILSVLHPIEECPDALAFATEPVYA-SLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASRPT   96 (138)
Q Consensus        19 rrEi~~L~rL-rHPnIL~l~e~~ee~~~~L~fVtE~V~~-sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   96 (138)
                      .+|+.++.+. .||||+++.+..+ ....+|+|||.+.+ .|-+-+..+                               
T Consensus       363 ~~e~~~~~~~~~h~niv~~~~v~~-~~~~~~~v~e~l~g~ell~ri~~~-------------------------------  410 (612)
T KOG0603|consen  363 QDEIPISLLVRDHPNIVKSHDVYE-DGKEIYLVMELLDGGELLRRIRSK-------------------------------  410 (612)
T ss_pred             ccccchhhhhcCCCcceeecceec-CCceeeeeehhccccHHHHHHHhc-------------------------------
Confidence            4566566555 5999999999665 57799999999964 444444322                               


Q ss_pred             ccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          97 HAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        97 ~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                           +....++..|+.||+.|+ .|||+..    .+-|+++-|
T Consensus       411 -----~~~~~e~~~w~~~lv~Av-~~LH~~gvvhRDLkp~NIL~  448 (612)
T KOG0603|consen  411 -----PEFCSEASQWAAELVSAV-DYLHEQGVVHRDLKPGNILL  448 (612)
T ss_pred             -----chhHHHHHHHHHHHHHHH-HHHHhcCeeecCCChhheee
Confidence                 222378899999999999 9999944    445888876

>KOG1035|consensus

Probab=97.80  E-value=7.5e-05  Score=72.63  Aligned_cols=43  Identities=21%  Similarity=0.183  Sum_probs=33.5

Q ss_pred             chHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccc
Q psy3822          11 KETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPV   54 (138)
Q Consensus        11 ~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V   54 (138)
                      .+.....+.||+..|+||.|||||++|-+-.|+ +.-+-++|.+
T Consensus       517 s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs-~~~~~~~ei~  559 (1351)
T KOG1035|consen  517 SDKLYSKILREVKLLARLNHPNVVRYYSAWVES-TAELTVLEIV  559 (1351)
T ss_pred             HHHHHHHHHHHHHHHhhcCCcceeeeehhhhcc-CCcccccccc
Confidence            567778899999999999999999999886553 3345555544

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=97.73  E-value=8.5e-05  Score=60.54  Aligned_cols=44  Identities=11%  Similarity=-0.001  Sum_probs=36.5

Q ss_pred             HHHHHHHhhhCCCCCeeEEeceeeecC-------CeEEEEeccccc-cHHHH
Q psy3822          18 LRLGVKQLEVYRHPKILSVLHPIEECP-------DALAFATEPVYA-SLASI   61 (138)
Q Consensus        18 lrrEi~~L~rLrHPnIL~l~e~~ee~~-------~~L~fVtE~V~~-sL~~~   61 (138)
                      +++|+.++.+|+||+|..+...++...       +..+++||||.| +|.++
T Consensus        82 ~e~Ea~~l~rL~~~GI~~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~  133 (232)
T PRK10359         82 YENLIVQTDRVRSEGLASLNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDM  133 (232)
T ss_pred             HHHHHHHHHHHHHCCCCcceEeeeecccccccccCCeEEEEEEECCccHHHh
Confidence            689999999999999999998765321       358999999986 88776

>KOG0614|consensus

Probab=97.73  E-value=8e-06  Score=74.11  Aligned_cols=82  Identities=18%  Similarity=0.144  Sum_probs=70.6

Q ss_pred             HHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccc-cccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          16 EILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPV-YASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASR   94 (138)
Q Consensus        16 e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V-~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (138)
                      +.+..|-.+|..++.|.||++|.-+-+ .+++||.||.| .|+|-.+|..++                            
T Consensus       465 eHv~sEr~Im~~~~s~fIvrLYrTfrd-~kyvYmLmEaClGGElWTiLrdRg----------------------------  515 (732)
T KOG0614|consen  465 EHVFSERNIMMECRSDFIVRLYRTFRD-SKYVYMLMEACLGGELWTILRDRG----------------------------  515 (732)
T ss_pred             HHHHhHHHHHHhcCchHHHHHHHHhcc-chhhhhhHHhhcCchhhhhhhhcC----------------------------
Confidence            667889999999999999999998875 66999999999 579999998654                            


Q ss_pred             CcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcc
Q psy3822          95 PTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSV  134 (138)
Q Consensus        95 ~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~  134 (138)
                             .|++.-.+.++.-+++|+ +|||...    .+.|.++
T Consensus       516 -------~Fdd~tarF~~acv~EAf-eYLH~k~iIYRDLKPENl  551 (732)
T KOG0614|consen  516 -------SFDDYTARFYVACVLEAF-EYLHRKGIIYRDLKPENL  551 (732)
T ss_pred             -------CcccchhhhhHHHHHHHH-HHHHhcCceeccCChhhe
Confidence                   588999999999999999 9999876    3445543

>KOG3653|consensus

Probab=97.67  E-value=5.4e-05  Score=67.77  Aligned_cols=71  Identities=15%  Similarity=0.025  Sum_probs=58.4

Q ss_pred             HHHHHHhhhCCCCCeeEEeceeeecCC----eEEEEeccc-cccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          19 RLGVKQLEVYRHPKILSVLHPIEECPD----ALAFATEPV-YASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSAS   93 (138)
Q Consensus        19 rrEi~~L~rLrHPnIL~l~e~~ee~~~----~L~fVtE~V-~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (138)
                      .|+|-.+-.|+|||||+++.+ |+-.+    ..++||||- .|||.++|+..                            
T Consensus       252 Ek~Iy~lp~m~h~nIl~Fi~~-ekr~t~~~~eywLVt~fh~kGsL~dyL~~n----------------------------  302 (534)
T KOG3653|consen  252 EKNIYSLPGMKHENILQFIGA-EKRGTADRMEYWLVTEFHPKGSLCDYLKAN----------------------------  302 (534)
T ss_pred             HHHHHhccCccchhHHHhhch-hccCCccccceeEEeeeccCCcHHHHHHhc----------------------------
Confidence            566777778999999999994 43333    799999998 48999999843                            


Q ss_pred             CCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC
Q psy3822          94 RPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS  127 (138)
Q Consensus        94 ~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a  127 (138)
                              .++=.+..+++.-++.|| +|||++-
T Consensus       303 --------tisw~~~cria~SmarGL-a~LHee~  327 (534)
T KOG3653|consen  303 --------TISWNSLCRIAESMARGL-AHLHEEL  327 (534)
T ss_pred             --------cccHHHHHHHHHHHHHHH-HHhcccC
Confidence                    355578889999999999 9999875

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=97.65  E-value=9.9e-05  Score=55.67  Aligned_cols=76  Identities=14%  Similarity=0.086  Sum_probs=55.2

Q ss_pred             HHHHHHHHHHhhhCCCCCee--EEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVYRHPKIL--SVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        15 ~e~lrrEi~~L~rLrHPnIL--~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      .+.+++|+.+|.+|+|++|.  .++. .  ..+..+++|||+. .+|.+++....                         
T Consensus        41 ~~~~~~E~~~l~~l~~~~i~~p~~~~-~--~~~~~~lv~e~~~g~~l~~~~~~~~-------------------------   92 (199)
T TIGR03724        41 RERTRNEARLLSRARKAGVNTPVVYD-V--DPDNKTIVMEYIEGKPLKDVIEEGN-------------------------   92 (199)
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCEEEE-E--ECCCCEEEEEEECCccHHHHHhhcH-------------------------
Confidence            46778999999999998643  3333 2  3456799999996 58988775210                         


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                 .      ..+.|++.+| .+||+..    .+-|.++.+
T Consensus        93 -----------~------~~~~~i~~~l-~~lH~~gi~H~Dl~~~Nil~  123 (199)
T TIGR03724        93 -----------D------ELLREIGRLV-GKLHKAGIVHGDLTTSNIIV  123 (199)
T ss_pred             -----------H------HHHHHHHHHH-HHHHHCCeecCCCCcceEEE
Confidence                       0      6789999999 9999854    445777654

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>PRK12274 serine/threonine protein kinase; Provisional

Probab=97.58  E-value=0.00027  Score=57.40  Aligned_cols=72  Identities=10%  Similarity=-0.077  Sum_probs=51.0

Q ss_pred             HHHHHHHHhhhCC-CCCeeEEeceeeecCCeEEEEeccccc-cHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          17 ILRLGVKQLEVYR-HPKILSVLHPIEECPDALAFATEPVYA-SLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASR   94 (138)
Q Consensus        17 ~lrrEi~~L~rLr-HPnIL~l~e~~ee~~~~L~fVtE~V~~-sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (138)
                      .+++|+++|++|. ||+|.++++ .    +..+++||||.| +|.+.+.                               
T Consensus        47 l~~rE~~iL~~L~~~~~vP~ll~-~----~~~~lvmeyI~G~~L~~~~~-------------------------------   90 (218)
T PRK12274         47 LARREALALRQLDGLPRTPRLLH-W----DGRHLDRSYLAGAAMYQRPP-------------------------------   90 (218)
T ss_pred             HHHHHHHHHHhcCCCCCCCEEEE-E----cCEEEEEeeecCccHHhhhh-------------------------------
Confidence            6899999999995 477888877 2    347999999975 6653321                               


Q ss_pred             CcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----Cc-ccCccee
Q psy3822          95 PTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TY-LPSSVAF  136 (138)
Q Consensus        95 ~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~-~~~~~~~  136 (138)
                              ..   ....+.|+..+| +++|+..    .+ .|+++.+
T Consensus        91 --------~~---~~~~~~qi~~~L-~~lH~~GIvHrDL~kp~NILv  125 (218)
T PRK12274         91 --------RG---DLAYFRAARRLL-QQLHRCGVAHNDLAKEANWLV  125 (218)
T ss_pred             --------hh---hHHHHHHHHHHH-HHHHHCcCccCCCCCcceEEE
Confidence                    00   123578999999 9999854    44 3666654

>KOG0664|consensus

Probab=97.56  E-value=8.1e-06  Score=69.87  Aligned_cols=78  Identities=22%  Similarity=0.242  Sum_probs=63.6

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeecC-C---eEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEECP-D---ALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPAN   89 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~-~---~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (138)
                      -.+.+-||+++|.-.+|-|+|..++.+.-.. +   .+|.+||.+..+|..++....                       
T Consensus        95 s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~TELmQSDLHKIIVSPQ-----------------------  151 (449)
T KOG0664|consen   95 SCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLTELMQSDLHKIIVSPQ-----------------------  151 (449)
T ss_pred             HHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHHHHHHhhhhheeccCC-----------------------
Confidence            3567789999999999999999988665321 1   488899999899998887332                       


Q ss_pred             CCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC
Q psy3822          90 QSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS  127 (138)
Q Consensus        90 ~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a  127 (138)
                                  .|+...||-++.||+.|| .|||+-.
T Consensus       152 ------------~Ls~DHvKVFlYQILRGL-KYLHsA~  176 (449)
T KOG0664|consen  152 ------------ALTPDHVKVFVYQILRGL-KYLHTAN  176 (449)
T ss_pred             ------------CCCcchhhhhHHHHHhhh-HHHhhcc
Confidence                        577789999999999999 9999754

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=97.53  E-value=0.0003  Score=56.42  Aligned_cols=80  Identities=5%  Similarity=-0.061  Sum_probs=55.3

Q ss_pred             HHHHHHHHHhhhCCCCCe--eEEeceeeecCC---eEEEEeccccc--cHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          16 EILRLGVKQLEVYRHPKI--LSVLHPIEECPD---ALAFATEPVYA--SLASILAFQESPAPNHSTNPVTGGSGSSPPPA   88 (138)
Q Consensus        16 e~lrrEi~~L~rLrHPnI--L~l~e~~ee~~~---~L~fVtE~V~~--sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (138)
                      ..+++|+.+|.+|+|++|  .+.+...++...   .-++|||++.+  +|.+++...                       
T Consensus        85 ~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~~~~~~~~lV~e~l~G~~~L~~~l~~~-----------------------  141 (239)
T PRK01723         85 TRAFAEFRLLAQLYEAGLPVPRPIAARVVRHGLFYRADILIERIEGARDLVALLQEA-----------------------  141 (239)
T ss_pred             hHHHHHHHHHHHHHhCCCCCceeEeeeeeecCcceeeeEEEEecCCCCCHHHHHhcC-----------------------
Confidence            567899999999999885  555553332222   23599999974  899888631                       


Q ss_pred             CCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          89 NQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        89 ~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                   .+++.    .+.||+.+| .+||+..    .+-|.+|.+
T Consensus       142 -------------~l~~~----~~~~i~~~l-~~lH~~GI~HrDlkp~NILv  175 (239)
T PRK01723        142 -------------PLSEE----QWQAIGQLI-ARFHDAGVYHADLNAHNILL  175 (239)
T ss_pred             -------------CCCHH----HHHHHHHHH-HHHHHCCCCCCCCCchhEEE
Confidence                         23332    267999999 9999755    445776643

>KOG2052|consensus

Probab=97.50  E-value=0.00019  Score=64.02  Aligned_cols=71  Identities=15%  Similarity=0.029  Sum_probs=53.6

Q ss_pred             HHHHHHHh--hhCCCCCeeEEeceeeecC---CeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          18 LRLGVKQL--EVYRHPKILSVLHPIEECP---DALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        18 lrrEi~~L--~rLrHPnIL~l~e~~ee~~---~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      -.||..+-  --|||+|||.++.+=--++   +.||+||+|-. |||+|+|...                          
T Consensus       250 WfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvTdYHe~GSL~DyL~r~--------------------------  303 (513)
T KOG2052|consen  250 WFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVTDYHEHGSLYDYLNRN--------------------------  303 (513)
T ss_pred             hhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEeeecccCCcHHHHHhhc--------------------------
Confidence            34555544  4489999999998422122   26999999985 8999999842                          


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcC
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYV  125 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~  125 (138)
                                .++-...-+..+-++.|| .+||.
T Consensus       304 ----------tv~~~~ml~LalS~AsGL-aHLH~  326 (513)
T KOG2052|consen  304 ----------TVTTEGMLKLALSIASGL-AHLHM  326 (513)
T ss_pred             ----------cCCHHHHHHHHHHHhhhH-HHHHH
Confidence                      355567778899999999 99995

>KOG0671|consensus

Probab=97.38  E-value=0.0007  Score=59.33  Aligned_cols=89  Identities=15%  Similarity=0.093  Sum_probs=70.6

Q ss_pred             HHHHHHHHHHHhhhCC--CC----CeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYR--HP----KILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPP   87 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLr--HP----nIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~   87 (138)
                      .-+-.+-|+..|++|.  -|    .++++.+-|+ -++++++|+|...-|+++.|.+..-                    
T Consensus       128 YreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFd-yrghiCivfellG~S~~dFlk~N~y--------------------  186 (415)
T KOG0671|consen  128 YREAALIEIEVLQKINESDPNGKFRCVQMRDWFD-YRGHICIVFELLGLSTFDFLKENNY--------------------  186 (415)
T ss_pred             HhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhh-ccCceEEEEeccChhHHHHhccCCc--------------------
Confidence            3455677999999993  33    3777766554 5789999999888899999985431                    


Q ss_pred             CCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcceee
Q psy3822          88 ANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAFC  137 (138)
Q Consensus        88 ~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~~  137 (138)
                                   .+|.-..|+.+..||++++ .|||+..    .+.|.++-||
T Consensus       187 -------------~~fpi~~ir~m~~QL~~sv-~fLh~~kl~HTDLKPENILfv  226 (415)
T KOG0671|consen  187 -------------IPFPIDHIRHMGYQLLESV-AFLHDLKLTHTDLKPENILFV  226 (415)
T ss_pred             -------------cccchHHHHHHHHHHHHHH-HHHHhcceeecCCChheEEEe
Confidence                         1466679999999999999 9999865    7789999987

>KOG0195|consensus

Probab=97.36  E-value=9.3e-05  Score=63.48  Aligned_cols=78  Identities=21%  Similarity=0.288  Sum_probs=62.9

Q ss_pred             HHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccc-cccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcc
Q psy3822          19 RLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPV-YASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASRPTH   97 (138)
Q Consensus        19 rrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V-~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   97 (138)
                      ..|.-.|+-..||||+.++.... +...+.+++.|+ ++||+|+|.+...                              
T Consensus       235 neefp~lrifshpnilpvlgacn-sppnlv~isq~mp~gslynvlhe~t~------------------------------  283 (448)
T KOG0195|consen  235 NEEFPALRIFSHPNILPVLGACN-SPPNLVIISQYMPFGSLYNVLHEQTS------------------------------  283 (448)
T ss_pred             hhhCcceeeecCCchhhhhhhcc-CCCCceEeeeeccchHHHHHHhcCcc------------------------------
Confidence            44555566678999999999876 466899999999 6999999996542                              


Q ss_pred             cccCCccHHHHHHHHHHHHHHHHhhhcCCCCccc
Q psy3822          98 AREYHFLDIEIKYGVAQVDSSEFTYLYVPSTYLP  131 (138)
Q Consensus        98 ~~~~~l~E~eik~gl~QI~~aL~~fLH~~a~~~~  131 (138)
                         ...+..++-++.++|+.|+ .|||+--.+||
T Consensus       284 ---vvvd~sqav~faldiargm-aflhslep~ip  313 (448)
T KOG0195|consen  284 ---VVVDHSQAVRFALDIARGM-AFLHSLEPMIP  313 (448)
T ss_pred             ---EEEecchHHHHHHHHHhhH-HHHhhcchhhh
Confidence               2456667888999999999 99999877775

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=97.32  E-value=0.00041  Score=50.80  Aligned_cols=32  Identities=13%  Similarity=-0.066  Sum_probs=28.5

Q ss_pred             CccHHHHHHHHHHHHHHHHhhhcCCCCcccCccee
Q psy3822         102 HFLDIEIKYGVAQVDSSEFTYLYVPSTYLPSSVAF  136 (138)
Q Consensus       102 ~l~E~eik~gl~QI~~aL~~fLH~~a~~~~~~~~~  136 (138)
                      .|+|.+++.++.||++|| +|||+..  .|++|.+
T Consensus        13 ~l~~~~~~~i~~qi~~~L-~~lH~~~--kp~Nil~   44 (176)
T smart00750       13 PLNEEEIWAVCLQCLRAL-RELHRQA--KSGNILL   44 (176)
T ss_pred             CCCHHHHHHHHHHHHHHH-HHHHhcC--CcccEeE
Confidence            589999999999999999 9999987  7777654

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>KOG0590|consensus

Probab=97.25  E-value=0.00015  Score=65.91  Aligned_cols=82  Identities=16%  Similarity=0.101  Sum_probs=63.3

Q ss_pred             HHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcc
Q psy3822          18 LRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASRPTH   97 (138)
Q Consensus        18 lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   97 (138)
                      +-.|.-+=.+|+||||+....-+.+ .+.....||||..+|++++...                                
T Consensus       368 i~sE~~i~~~l~h~~~~e~l~~~~~-~~~~~~~mE~~~~Dlf~~~~~~--------------------------------  414 (601)
T KOG0590|consen  368 ITSEFCIGSSLSHPNIIETLDIVQE-IDGILQSMEYCPYDLFSLVMSN--------------------------------  414 (601)
T ss_pred             hhhheeecccccCCchhhhHHHHhh-cccchhhhhcccHHHHHHHhcc--------------------------------
Confidence            5666667778999999988886665 4445555999977999999843                                


Q ss_pred             cccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          98 AREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        98 ~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                         ..+.-.|+-..+.||+.|+ +|+|...    .+.|.++.|
T Consensus       415 ---~~~~~~e~~c~fKqL~~Gv-~y~h~~GiahrdlK~enll~  453 (601)
T KOG0590|consen  415 ---GKLTPLEADCFFKQLLRGV-KYLHSMGLAHRDLKLENLLV  453 (601)
T ss_pred             ---cccchhhhhHHHHHHHHHH-HHHHhcCceeccCccccEEE
Confidence               2577789999999999999 9999866    444555543

>KOG1345|consensus

Probab=97.24  E-value=0.00017  Score=61.54  Aligned_cols=72  Identities=17%  Similarity=0.065  Sum_probs=56.5

Q ss_pred             HHHHHHhhhC-CCCCeeEEeceeeecCCeEEEEeccc-cccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q psy3822          19 RLGVKQLEVY-RHPKILSVLHPIEECPDALAFATEPV-YASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASRPT   96 (138)
Q Consensus        19 rrEi~~L~rL-rHPnIL~l~e~~ee~~~~L~fVtE~V-~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   96 (138)
                      -||-.-=-.| .|-|||.-|+...+|.+...|++||+ .|+|.+-+..                                
T Consensus        68 ~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE~aP~gdL~snv~~--------------------------------  115 (378)
T KOG1345|consen   68 VREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQEFAPRGDLRSNVEA--------------------------------  115 (378)
T ss_pred             HHHhccceeeccchhhhHHHHHHhhcCceEEEeeccCccchhhhhcCc--------------------------------
Confidence            4444332234 49999999998888899999999998 5888766541                                


Q ss_pred             ccccCCccHHHHHHHHHHHHHHHHhhhcCCC
Q psy3822          97 HAREYHFLDIEIKYGVAQVDSSEFTYLYVPS  127 (138)
Q Consensus        97 ~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a  127 (138)
                          ..+-|.-.|+.+.|+++|+ .|+|+..
T Consensus       116 ----~GigE~~~K~v~~ql~SAi-~fMHskn  141 (378)
T KOG1345|consen  116 ----AGIGEANTKKVFAQLLSAI-EFMHSKN  141 (378)
T ss_pred             ----ccccHHHHHHHHHHHHHHH-HHhhccc
Confidence                1477889999999999999 9999854

>KOG0986|consensus

Probab=97.21  E-value=0.00041  Score=62.42  Aligned_cols=83  Identities=17%  Similarity=0.115  Sum_probs=67.4

Q ss_pred             HHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccc-cccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          17 ILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPV-YASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASRP   95 (138)
Q Consensus        17 ~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V-~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   95 (138)
                      ....|-++|.+..-|.||.+--++| |++.|+||+-.+ .|+|.=-|.+.++                            
T Consensus       231 maLnEk~iL~kV~s~FiVslaYAfe-Tkd~LClVLtlMNGGDLkfHiyn~g~----------------------------  281 (591)
T KOG0986|consen  231 MALNEKQILEKVSSPFIVSLAYAFE-TKDALCLVLTLMNGGDLKFHIYNHGN----------------------------  281 (591)
T ss_pred             HhhHHHHHHHHhccCcEEEEeeeec-CCCceEEEEEeecCCceeEEeeccCC----------------------------
Confidence            3467899999999999999988786 799999999998 4688655543331                            


Q ss_pred             cccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcc
Q psy3822          96 THAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSV  134 (138)
Q Consensus        96 ~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~  134 (138)
                           ..|+|.++..+..||+-|| +.||+..    .+.|.+|
T Consensus       282 -----~gF~e~ra~FYAAEi~cGL-ehlH~~~iVYRDLKPeNI  318 (591)
T KOG0986|consen  282 -----PGFDEQRARFYAAEIICGL-EHLHRRRIVYRDLKPENI  318 (591)
T ss_pred             -----CCCchHHHHHHHHHHHhhH-HHHHhcceeeccCChhhe
Confidence                 1699999999999999999 9999865    3456655

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=97.20  E-value=0.001  Score=59.58  Aligned_cols=106  Identities=12%  Similarity=-0.081  Sum_probs=62.0

Q ss_pred             HHHHHHhhhCCCCCe-----eEEeceeee-------cCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCC
Q psy3822          19 RLGVKQLEVYRHPKI-----LSVLHPIEE-------CPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSP   85 (138)
Q Consensus        19 rrEi~~L~rLrHPnI-----L~l~e~~ee-------~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~   85 (138)
                      ..|+.++.+++|.++     +++++.+..       +++..++|+||+. ++|.++|.......   .+...     .+ 
T Consensus       220 ~vE~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~---~~~L~-----e~-  290 (507)
T PLN03224        220 MVEAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPF---PGCLE-----EF-  290 (507)
T ss_pred             HHHHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCC---cchHH-----HH-
Confidence            357888888887765     344433321       2356899999996 79999997432100   00000     00 


Q ss_pred             CCCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          86 PPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        86 ~~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                       -..+ ...+.......++...++.++.||++|| .|||+..    .+.|++|.+
T Consensus       291 -l~~g-~~l~~~~~~~~~~~~~~~~i~~ql~~aL-~~lH~~~ivHrDLKp~NILl  342 (507)
T PLN03224        291 -MMAG-KKIPDNMPQDKRDINVIKGVMRQVLTGL-RKLHRIGIVHRDIKPENLLV  342 (507)
T ss_pred             -HhcC-CchhhhcccccCCHHHHHHHHHHHHHHH-HHHHHCCeecCCCchHhEEE
Confidence             0000 0000111122467788999999999999 9999864    344777654

>KOG0612|consensus

Probab=96.94  E-value=0.001  Score=64.81  Aligned_cols=84  Identities=12%  Similarity=0.061  Sum_probs=71.3

Q ss_pred             HHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccc-cccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPV-YASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSAS   93 (138)
Q Consensus        15 ~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V-~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (138)
                      ...+|.|=.+|.--.-+=|+++.-+|.+ .++||+||||+ +|+|-++|.+.+                           
T Consensus       119 tA~F~EERDimv~~ns~Wiv~LhyAFQD-~~~LYlVMdY~pGGDlltLlSk~~---------------------------  170 (1317)
T KOG0612|consen  119 TACFREERDIMVFGNSEWIVQLHYAFQD-ERYLYLVMDYMPGGDLLTLLSKFD---------------------------  170 (1317)
T ss_pred             HHHHHHHhHHHHcCCcHHHHHHHHHhcC-ccceEEEEecccCchHHHHHhhcC---------------------------
Confidence            4678888899988889999999999985 67999999998 689999998543                           


Q ss_pred             CCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcce
Q psy3822          94 RPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVA  135 (138)
Q Consensus        94 ~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~  135 (138)
                              +++|.=++.++..|+-|| +=||+-.    ...|++|-
T Consensus       171 --------~~pE~~ArFY~aEiVlAl-dslH~mgyVHRDiKPDNvL  207 (1317)
T KOG0612|consen  171 --------RLPEDWARFYTAEIVLAL-DSLHSMGYVHRDIKPDNVL  207 (1317)
T ss_pred             --------CChHHHHHHHHHHHHHHH-HHHHhccceeccCCcceeE
Confidence                    589999999999999999 9898744    45688874

>KOG1167|consensus

Probab=96.91  E-value=0.0035  Score=55.22  Aligned_cols=82  Identities=11%  Similarity=0.059  Sum_probs=68.5

Q ss_pred             HHHHHHHHHHhhhCC-CCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVYR-HPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        15 ~e~lrrEi~~L~rLr-HPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      .+.+-.|+..|.+|. |-||+.+.+.+. ..+.+++|+||.. .+-.+++.                             
T Consensus        78 p~ri~~El~~L~~~gG~~ni~~~~~~~r-nnd~v~ivlp~~~H~~f~~l~~-----------------------------  127 (418)
T KOG1167|consen   78 PSRILNELEMLYRLGGSDNIIKLNGCFR-NNDQVAIVLPYFEHDRFRDLYR-----------------------------  127 (418)
T ss_pred             chHHHHHHHHHHHhccchhhhcchhhhc-cCCeeEEEecccCccCHHHHHh-----------------------------
Confidence            356889999999997 999999999776 5789999999997 46666665                             


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                               .++-.+++.++..++.|| .++|.+.    ...|+++.|
T Consensus       128 ---------~l~~~~i~~Yl~~ll~Al-~~~h~~GIvHRDiKpsNFL~  165 (418)
T KOG1167|consen  128 ---------SLSLAEIRWYLRNLLKAL-AHLHKNGIVHRDIKPSNFLY  165 (418)
T ss_pred             ---------cCCHHHHHHHHHHHHHHh-hhhhccCccccCCCcccccc
Confidence                     345579999999999999 9999876    456888876

>KOG3741|consensus

Probab=96.82  E-value=0.0042  Score=56.87  Aligned_cols=84  Identities=6%  Similarity=-0.049  Sum_probs=59.5

Q ss_pred             HHHhhhCCCCCeeEEeceeeecC----CeEEEEecccc--ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          22 VKQLEVYRHPKILSVLHPIEECP----DALAFATEPVY--ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASRP   95 (138)
Q Consensus        22 i~~L~rLrHPnIL~l~e~~ee~~----~~L~fVtE~V~--~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   95 (138)
                      +++++++-|+|||.+-++|. |+    .+|.||.+|-.  .+|.++--.....          +  .+.+        ..
T Consensus       324 ve~wkkl~h~NvV~frevf~-t~tF~D~SlvlvYDYyP~s~TL~d~~F~~~~~----------t--~~~n--------~~  382 (655)
T KOG3741|consen  324 VEAWKKLCHTNVVPFREVFL-TYTFGDLSLVLVYDYYPSSPTLYDLYFANPPF----------T--KRTN--------SF  382 (655)
T ss_pred             HHHHHHhccCceeehhhhhh-hhccCcceEEEEEecCCCCchHHHHHccCCcc----------c--cccc--------cc
Confidence            78899999999999999887 33    38999999974  5787765421110          0  0000        00


Q ss_pred             cccccCCccHHHHHHHHHHHHHHHHhhhcCCC
Q psy3822          96 THAREYHFLDIEIKYGVAQVDSSEFTYLYVPS  127 (138)
Q Consensus        96 ~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a  127 (138)
                      ....+....|.+++.++.||+.|| .++|+.+
T Consensus       383 ~~~~~~~~~e~~lW~y~~QLtaaL-~sIHssG  413 (655)
T KOG3741|consen  383 YPSQNLKAPEEVLWSYISQLTAAL-YSIHSSG  413 (655)
T ss_pred             cccCCCCchHHHHHHHHHHHHHHH-HHHHhcC
Confidence            111233688999999999999999 9999875

>KOG0984|consensus

Probab=96.77  E-value=0.0029  Score=52.51  Aligned_cols=90  Identities=10%  Similarity=0.011  Sum_probs=69.4

Q ss_pred             HHHHHHHHHHHHhhhC-CCCCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVY-RHPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rL-rHPnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      .....+-+|+.+..|- --|.+|++|+.+..+ ..+|++||.+..||..+-++--                         
T Consensus        86 q~q~r~L~dldi~~r~~~CPf~V~FyGa~~re-gdvwIcME~M~tSldkfy~~v~-------------------------  139 (282)
T KOG0984|consen   86 QEQKRLLMDLDIIMRTVDCPFTVHFYGALFRE-GDVWICMELMDTSLDKFYRKVL-------------------------  139 (282)
T ss_pred             HHHHHHHHhhhhhccCCCCCeEEEeehhhhcc-ccEEEeHHHhhhhHHHHHHHHH-------------------------
Confidence            3446667787777664 699999999998764 4699999999888877665321                         


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCCCcc-----cCcce
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPSTYL-----PSSVA  135 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a~~~-----~~~~~  135 (138)
                            .++..++|.-+-++...|.+|| .|||+.-+.|     ||+|.
T Consensus       140 ------~~g~~ipE~vlGkIa~Svv~al-~~L~~kL~vIHRDvKPsNiL  181 (282)
T KOG0984|consen  140 ------KKGGTIPEDVLGKIAVSVVHAL-EFLHSKLSVIHRDVKPSNIL  181 (282)
T ss_pred             ------hcCCcCchHHhhHhHHHHHHHH-HHHHHHhhhhhccCCcceEE
Confidence                  1234789999999999999999 9999976654     77764

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=96.77  E-value=0.0066  Score=41.74  Aligned_cols=78  Identities=14%  Similarity=0.009  Sum_probs=55.8

Q ss_pred             HHHHHHHHHHhhhCCC--CCeeEEeceeeecCCeEEEEeccccc-cHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVYRH--PKILSVLHPIEECPDALAFATEPVYA-SLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        15 ~e~lrrEi~~L~rLrH--PnIL~l~e~~ee~~~~L~fVtE~V~~-sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      ...+.+|+..|++|+|  +++.+++...+ ..+..+++||++.+ ++..+                              
T Consensus        35 ~~~~~~e~~~~~~l~~~~~~~p~~~~~~~-~~~~~~~v~e~~~g~~~~~~------------------------------   83 (155)
T cd05120          35 GADREREVAILQLLARKGLPVPKVLASGE-SDGWSYLLMEWIEGETLDEV------------------------------   83 (155)
T ss_pred             hhHHHHHHHHHHHHHHcCCCCCeEEEEcC-CCCccEEEEEecCCeecccC------------------------------
Confidence            4568999999999987  48888887554 45789999999864 33221                              


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC-------CcccCccee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS-------TYLPSSVAF  136 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a-------~~~~~~~~~  136 (138)
                                  +.......+.+++++| .++|...       .+-|++|.+
T Consensus        84 ------------~~~~~~~~~~~~~~~l-~~lh~~~~~~i~H~Dl~~~Nil~  122 (155)
T cd05120          84 ------------SEEEKEDIAEQLAELL-AKLHQLPLLVLCHGDLHPGNILV  122 (155)
T ss_pred             ------------CHHHHHHHHHHHHHHH-HHHhCCCceEEEecCCCcceEEE
Confidence                        2234556788999999 9999753       344666655

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>KOG1164|consensus

Probab=96.64  E-value=0.0075  Score=49.75  Aligned_cols=86  Identities=12%  Similarity=0.041  Sum_probs=66.5

Q ss_pred             HHHHHHHHhhhCCC----CCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          17 ILRLGVKQLEVYRH----PKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        17 ~lrrEi~~L~rLrH----PnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      .++.|+.+|..|..    +++-++++.-..+.+.-++||+.+..+|.++......                         
T Consensus        62 ~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~iVM~l~G~sL~dl~~~~~~-------------------------  116 (322)
T KOG1164|consen   62 VLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFIVMSLLGPSLEDLRKRNPP-------------------------  116 (322)
T ss_pred             cchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEEEEeccCccHHHHHHhCCC-------------------------
Confidence            68899999999974    4777777744234568899999999999998874431                         


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                              ..|+..-+-....|++.+| ++||+..    ...|+++++
T Consensus       117 --------~~fs~~T~l~ia~q~l~~l-~~lH~~G~iHRDiKp~N~~~  155 (322)
T KOG1164|consen  117 --------GRFSRKTVLRIAIQNLNAL-EDLHSKGFIHRDIKPENFVV  155 (322)
T ss_pred             --------CCcCHhHHHHHHHHHHHHH-HHHHhcCcccCCcCHHHeee
Confidence                    1577778888999999999 9999755    335777665

>KOG1266|consensus

Probab=96.60  E-value=0.0014  Score=57.39  Aligned_cols=75  Identities=17%  Similarity=0.114  Sum_probs=57.0

Q ss_pred             HhhhCCCCCeeEEeceeee----cCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccc
Q psy3822          24 QLEVYRHPKILSVLHPIEE----CPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASRPTHA   98 (138)
Q Consensus        24 ~L~rLrHPnIL~l~e~~ee----~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   98 (138)
                      +|..|-|-|||.+..-..+    .+....|+|||+. ++|...|++..++.                             
T Consensus       120 nllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~-----------------------------  170 (458)
T KOG1266|consen  120 NLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQ-----------------------------  170 (458)
T ss_pred             HHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhh-----------------------------
Confidence            4555678888877653322    2346999999995 89999999765432                             


Q ss_pred             ccCCccHHHHHHHHHHHHHHHHhhhcCCCCcc
Q psy3822          99 REYHFLDIEIKYGVAQVDSSEFTYLYVPSTYL  130 (138)
Q Consensus        99 ~~~~l~E~eik~gl~QI~~aL~~fLH~~a~~~  130 (138)
                        -.+.+...++|+-||+.|| .|||+-+-.+
T Consensus       171 --~a~~~~~wkkw~tqIlsal-~yLhs~~Ppi  199 (458)
T KOG1266|consen  171 --KALFQKAWKKWCTQILSAL-SYLHSCDPPI  199 (458)
T ss_pred             --hhhhHHHHHHHHHHHHhhh-hhhhccCCcc
Confidence              2577888999999999999 9999987554

>KOG0695|consensus

Probab=96.51  E-value=0.0031  Score=55.60  Aligned_cols=79  Identities=13%  Similarity=0.119  Sum_probs=61.9

Q ss_pred             hHHHHHHHHHHHHhhhC-CCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVY-RHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPAN   89 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rL-rHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (138)
                      ++.++.+..|-.....- .||.+|-+...|. |...|+||.|||. |+|-=-++++                        
T Consensus       291 dedidwvqtek~vfe~asn~pflvglhscfq-tesrlffvieyv~ggdlmfhmqrq------------------------  345 (593)
T KOG0695|consen  291 DEDIDWVQTEKHVFEQASNNPFLVGLHSCFQ-TESRLFFVIEYVNGGDLMFHMQRQ------------------------  345 (593)
T ss_pred             cccchhHHhhHHHHHhccCCCeEEehhhhhc-ccceEEEEEEEecCcceeeehhhh------------------------
Confidence            44556777777777654 6999999988675 6789999999995 6774333322                        


Q ss_pred             CCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC
Q psy3822          90 QSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS  127 (138)
Q Consensus        90 ~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a  127 (138)
                                 ..|+|..++.+-..|+-|| .|||+..
T Consensus       346 -----------rklpeeharfys~ei~lal-~flh~rg  371 (593)
T KOG0695|consen  346 -----------RKLPEEHARFYSAEICLAL-NFLHERG  371 (593)
T ss_pred             -----------hcCcHHHhhhhhHHHHHHH-HHHhhcC
Confidence                       2699999999999999999 9999976

>KOG0696|consensus

Probab=96.49  E-value=0.0012  Score=59.33  Aligned_cols=70  Identities=16%  Similarity=0.144  Sum_probs=53.4

Q ss_pred             HHHHhhhC-CCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccc
Q psy3822          21 GVKQLEVY-RHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASRPTHA   98 (138)
Q Consensus        21 Ei~~L~rL-rHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   98 (138)
                      |-.+|+-. +-|.++++...|. |-+.||||||||. |+|---+++-+                                
T Consensus       399 EKrvLAL~~kppFL~qlHScFQ-TmDRLyFVMEyvnGGDLMyhiQQ~G--------------------------------  445 (683)
T KOG0696|consen  399 EKRVLALPGKPPFLVQLHSCFQ-TMDRLYFVMEYVNGGDLMYHIQQVG--------------------------------  445 (683)
T ss_pred             hhhheecCCCCchHHHHHHHhh-hhhheeeEEEEecCchhhhHHHHhc--------------------------------
Confidence            33444432 6778888777665 7899999999995 68866665433                                


Q ss_pred             ccCCccHHHHHHHHHHHHHHHHhhhcCCC
Q psy3822          99 REYHFLDIEIKYGVAQVDSSEFTYLYVPS  127 (138)
Q Consensus        99 ~~~~l~E~eik~gl~QI~~aL~~fLH~~a  127 (138)
                         .|.|..+-.+...|+-|| =|||+..
T Consensus       446 ---kFKEp~AvFYAaEiaigL-FFLh~kg  470 (683)
T KOG0696|consen  446 ---KFKEPVAVFYAAEIAIGL-FFLHSKG  470 (683)
T ss_pred             ---ccCCchhhhhhHHHHHHh-hhhhcCC
Confidence               577888889999999999 9999876

>KOG1023|consensus

Probab=96.43  E-value=0.0047  Score=55.37  Aligned_cols=67  Identities=15%  Similarity=0.104  Sum_probs=55.6

Q ss_pred             hhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCc
Q psy3822          25 LEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASRPTHAREYHF  103 (138)
Q Consensus        25 L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  103 (138)
                      |+.|.|.|+..+++...+ ...++.|.+||. |+|.+++....                                  ..+
T Consensus         1 l~~l~h~n~~~f~g~~~~-~~~~~~i~~~c~rGsl~D~i~~~~----------------------------------~~~   45 (484)
T KOG1023|consen    1 LRQLDHDNLNKFIGASVD-GPEMIVIWEYCSRGSLLDILSNED----------------------------------IKL   45 (484)
T ss_pred             CcccchhhhhhheeeEec-CCceEEEEeeecCccHHhHHhccc----------------------------------cCc
Confidence            567999999999998775 478999999996 89999998632                                  245


Q ss_pred             cHHHHHHHHHHHHHHHHhhhcCCC
Q psy3822         104 LDIEIKYGVAQVDSSEFTYLYVPS  127 (138)
Q Consensus       104 ~E~eik~gl~QI~~aL~~fLH~~a  127 (138)
                      +..=.-..+.+|++|| .|||++.
T Consensus        46 d~~F~~s~~rdi~~Gl-~ylh~s~   68 (484)
T KOG1023|consen   46 DYFFILSFIRDISKGL-AYLHNSP   68 (484)
T ss_pred             cHHHHHHHHHHHHHHH-HHHhcCc
Confidence            6656667899999999 9999875

>KOG4158|consensus

Probab=96.16  E-value=0.0091  Score=53.58  Aligned_cols=62  Identities=18%  Similarity=0.135  Sum_probs=47.3

Q ss_pred             CCCCeeEEeceeee--------------------------cCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCC
Q psy3822          29 RHPKILSVLHPIEE--------------------------CPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSG   82 (138)
Q Consensus        29 rHPnIL~l~e~~ee--------------------------~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~   82 (138)
                      +|||||+++..|.+                          ...+||+||..-..+|..+|-.+..               
T Consensus       274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~tLr~yl~~~~~---------------  338 (598)
T KOG4158|consen  274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQTLREYLWTRHR---------------  338 (598)
T ss_pred             CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchhhHHHHHhcCCC---------------
Confidence            79999999765532                          1247999999999999999974432               


Q ss_pred             CCCCCCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC
Q psy3822          83 SSPPPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS  127 (138)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a  127 (138)
                                           +----+-++.|+++|. .|||.+.
T Consensus       339 ---------------------s~r~~~~~laQlLEav-~hL~~hg  361 (598)
T KOG4158|consen  339 ---------------------SYRTGRVILAQLLEAV-THLHKHG  361 (598)
T ss_pred             ---------------------chHHHHHHHHHHHHHH-HHHHHcc
Confidence                                 2234456799999999 9999865

>KOG1024|consensus

Probab=96.15  E-value=0.031  Score=50.09  Aligned_cols=91  Identities=19%  Similarity=0.091  Sum_probs=62.7

Q ss_pred             CcchHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccc-cccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCC
Q psy3822           9 KRKETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPV-YASLASILAFQESPAPNHSTNPVTGGSGSSPPP   87 (138)
Q Consensus         9 ~~~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V-~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~   87 (138)
                      ...+..++.+..|.-.|-.+.|||++++.+.-.|..+.-.....+. .+.|..+|....-..+  ++             
T Consensus       325 ~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~--~~-------------  389 (563)
T KOG1024|consen  325 HASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYATPFVLYPATGVGNLKSFLQICRGDDP--SY-------------  389 (563)
T ss_pred             cccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccCcceEEEeccCcchHHHHHHHhccCCC--cc-------------
Confidence            3455667888889999999999999999997555333333333333 5799988874321110  00             


Q ss_pred             CCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC
Q psy3822          88 ANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS  127 (138)
Q Consensus        88 ~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a  127 (138)
                                  ...++..++-...-||+.|+ +|||++.
T Consensus       390 ------------aqtvtt~qlV~masQla~am-~hlh~~~  416 (563)
T KOG1024|consen  390 ------------AQTVTTIQLVLMASQLAMAM-EHLHNHG  416 (563)
T ss_pred             ------------ccchhHHHHHHHHHHHHHHH-HHHHhcC
Confidence                        11466778888999999999 9999864

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=96.08  E-value=0.0075  Score=54.29  Aligned_cols=78  Identities=14%  Similarity=0.037  Sum_probs=46.7

Q ss_pred             cCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHh
Q psy3822          43 CPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFT  121 (138)
Q Consensus        43 ~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~  121 (138)
                      +.+.+++|+||+. ++|.+++........  ......+  ..           ....+.....+..++.++.||+.|| +
T Consensus       206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~--v~~~l~~--~~-----------~~l~~~~~r~~~~i~~i~~qll~aL-~  269 (566)
T PLN03225        206 KEDEYWLVWRYEGESTLADLMQSKEFPYN--VEPYLLG--KV-----------QDLPKGLERENKIIQTIMRQILFAL-D  269 (566)
T ss_pred             cCCceEEEEEecCCCcHHHHHHhcCCchh--HHHHhcc--ch-----------hhccccchhhHHHHHHHHHHHHHHH-H
Confidence            4568999999995 699999975432100  0000000  00           0000111345567889999999999 9


Q ss_pred             hhcCCC----CcccCccee
Q psy3822         122 YLYVPS----TYLPSSVAF  136 (138)
Q Consensus       122 fLH~~a----~~~~~~~~~  136 (138)
                      |||+..    .+.|++|.+
T Consensus       270 yLH~~gIiHRDLKP~NILl  288 (566)
T PLN03225        270 GLHSTGIVHRDVKPQNIIF  288 (566)
T ss_pred             HHHHCCEEeCcCCHHHEEE
Confidence            999864    345777654

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=96.05  E-value=0.0074  Score=45.29  Aligned_cols=77  Identities=13%  Similarity=-0.015  Sum_probs=51.3

Q ss_pred             HHHHHHHHHHHhhhCCC--CCeeEEeceeeecC--CeEEEEeccccc-cHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRH--PKILSVLHPIEECP--DALAFATEPVYA-SLASILAFQESPAPNHSTNPVTGGSGSSPPPA   88 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrH--PnIL~l~e~~ee~~--~~L~fVtE~V~~-sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (138)
                      ....+++|++.|+.|++  .++.+++....+..  +..+++||++.+ ++.+.+..                        
T Consensus        38 ~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~G~~l~~~~~~------------------------   93 (223)
T cd05154          38 SAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVDGRVLRDRLLR------------------------   93 (223)
T ss_pred             ccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeCCEecCCCCCC------------------------
Confidence            35678999999999875  22333433222211  357899999975 44433210                        


Q ss_pred             CCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC
Q psy3822          89 NQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS  127 (138)
Q Consensus        89 ~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a  127 (138)
                                  ..+++.+....+.|++++| ..||+-.
T Consensus        94 ------------~~~~~~~~~~i~~~i~~~l-~~lH~~~  119 (223)
T cd05154          94 ------------PELSPEERRALARALADTL-AALHSVD  119 (223)
T ss_pred             ------------CCCCHHHHHHHHHHHHHHH-HHHhCCC
Confidence                        1466777788899999999 9999854

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>KOG0983|consensus

Probab=95.49  E-value=0.016  Score=49.93  Aligned_cols=94  Identities=11%  Similarity=0.066  Sum_probs=72.2

Q ss_pred             CCCCcchHHHHHHHHHHHHhhhCC-CCCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCC
Q psy3822           6 HKPKRKETVTEILRLGVKQLEVYR-HPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSS   84 (138)
Q Consensus         6 ~K~~~~e~~~e~lrrEi~~L~rLr-HPnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~   84 (138)
                      .+...+|+ .+++.+++.++.+-. -|.||+-++-|. ++..++++||.+..++..+|+...                  
T Consensus       126 ~rt~Nkee-~kRILmDldvv~~s~dcpyIV~c~GyFi-~n~dV~IcMelMs~C~ekLlkrik------------------  185 (391)
T KOG0983|consen  126 RRTGNKEE-NKRILMDLDVVLKSHDCPYIVQCFGYFI-TNTDVFICMELMSTCAEKLLKRIK------------------  185 (391)
T ss_pred             cccCCHHH-HHHHHHhhhHHhhccCCCeeeeeeeEEe-eCchHHHHHHHHHHHHHHHHHHhc------------------
Confidence            34334444 456667777777544 799999999887 466799999999989998888543                  


Q ss_pred             CCCCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCCCc-----ccCccee
Q psy3822          85 PPPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPSTY-----LPSSVAF  136 (138)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a~~-----~~~~~~~  136 (138)
                                      .+++|..+-+....+.+|| .||-+.-+.     .||++.|
T Consensus       186 ----------------~piPE~ilGk~tva~v~AL-~YLKeKH~viHRDvKPSNILl  225 (391)
T KOG0983|consen  186 ----------------GPIPERILGKMTVAIVKAL-YYLKEKHGVIHRDVKPSNILL  225 (391)
T ss_pred             ----------------CCchHHhhhhhHHHHHHHH-HHHHHhcceeecccCccceEE
Confidence                            2588888999999999999 999775544     4888765

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=95.43  E-value=0.027  Score=42.87  Aligned_cols=75  Identities=11%  Similarity=0.050  Sum_probs=51.3

Q ss_pred             HHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccccc-cHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          17 ILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYA-SLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASRP   95 (138)
Q Consensus        17 ~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~~-sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   95 (138)
                      ...+|...+.++.|+++ .+.+++.  ....++||||+.+ +|.++...                               
T Consensus        79 ~~~~E~~~l~~l~~~~i-~v~~~~~--~~~~~lv~e~~~g~~L~~~~~~-------------------------------  124 (198)
T cd05144          79 AAQKEFAALKALYEEGF-PVPKPID--WNRHAVVMEYIDGVELYRVRVL-------------------------------  124 (198)
T ss_pred             HHHHHHHHHHHHHHcCC-CCCceee--cCCceEEEEEeCCcchhhcccc-------------------------------
Confidence            46889999999999864 3334333  2346899999965 66544220                               


Q ss_pred             cccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          96 THAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        96 ~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                ......+.||++++ .++|+..    .+-|++|.+
T Consensus       125 ----------~~~~~~~~~i~~~l-~~lh~~gi~H~Dl~p~Nill  158 (198)
T cd05144         125 ----------EDPEEVLDEILEEI-VKAYKHGIIHGDLSEFNILV  158 (198)
T ss_pred             ----------ccHHHHHHHHHHHH-HHHHHCCCCcCCCCcccEEE
Confidence                      13456788999999 9999854    445777764

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>KOG0670|consensus

Probab=95.37  E-value=0.02  Score=52.77  Aligned_cols=91  Identities=12%  Similarity=0.081  Sum_probs=69.5

Q ss_pred             chHHHHHHHHHHHHhhhCC------CCCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCC
Q psy3822          11 KETVTEILRLGVKQLEVYR------HPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSS   84 (138)
Q Consensus        11 ~e~~~e~lrrEi~~L~rLr------HPnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~   84 (138)
                      .|.|.+.=.+|+++|++|.      --++|+|+--|. .+++||+|+|+..-.|.++|++.++.                
T Consensus       468 NE~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~-hknHLClVFE~LslNLRevLKKyG~n----------------  530 (752)
T KOG0670|consen  468 NEVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFK-HKNHLCLVFEPLSLNLREVLKKYGRN----------------  530 (752)
T ss_pred             chHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhh-hcceeEEEehhhhchHHHHHHHhCcc----------------
Confidence            4566677789999999994      237999998887 58899999999999999999987642                


Q ss_pred             CCCCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcC----CCCcccCcce
Q psy3822          85 PPPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYV----PSTYLPSSVA  135 (138)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~----~a~~~~~~~~  135 (138)
                                      ..|.-.-|+.+..|+.-|| ..|-.    ++...|+++.
T Consensus       531 ----------------vGL~ikaVRsYaqQLflAL-klLK~c~vlHaDIKPDNiL  568 (752)
T KOG0670|consen  531 ----------------VGLHIKAVRSYAQQLFLAL-KLLKKCGVLHADIKPDNIL  568 (752)
T ss_pred             ----------------cceeehHHHHHHHHHHHHH-HHHHhcCeeecccCccceE
Confidence                            2455567888899999888 76643    2344577653

>cd05119 RIO RIO kinase family, catalytic domain

Probab=94.69  E-value=0.08  Score=39.22  Aligned_cols=78  Identities=13%  Similarity=0.086  Sum_probs=48.1

Q ss_pred             HHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccccc-cHH-HHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          18 LRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYA-SLA-SILAFQESPAPNHSTNPVTGGSGSSPPPANQSASRP   95 (138)
Q Consensus        18 lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~~-sL~-~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   95 (138)
                      ...|...+.++++..+ .+..++. + ...++||||+.+ .+. ..+...                              
T Consensus        64 ~~~e~~~l~~l~~~~~-~~~~~~~-~-~~~~lv~e~~~g~~~~~~~l~~~------------------------------  110 (187)
T cd05119          64 AEKEFRNLKRLYEAGV-PVPKPID-L-NRHVLVMEFIGGDGIPAPRLKDV------------------------------  110 (187)
T ss_pred             HHHHHHHHHHHHHcCC-CCCceEe-c-CCCEEEEEEeCCCCccChhhhhh------------------------------
Confidence            3678888888766542 2222232 2 246999999975 221 112110                              


Q ss_pred             cccccCCccHHHHHHHHHHHHHHHHhhhcCCC-----CcccCccee
Q psy3822          96 THAREYHFLDIEIKYGVAQVDSSEFTYLYVPS-----TYLPSSVAF  136 (138)
Q Consensus        96 ~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a-----~~~~~~~~~  136 (138)
                            ... .+++..+.|++.++ .++|.+.     .+-|+++.+
T Consensus       111 ------~~~-~~~~~~~~~~~~~l-~~lh~~~~ivH~Dl~p~Nili  148 (187)
T cd05119         111 ------RLL-EDPEELYDQILELM-RKLYREAGLVHGDLSEYNILV  148 (187)
T ss_pred             ------hhc-ccHHHHHHHHHHHH-HHHhhccCcCcCCCChhhEEE
Confidence                  111 57788999999999 9999944     444777765

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>KOG1240|consensus

Probab=94.11  E-value=0.012  Score=57.75  Aligned_cols=71  Identities=15%  Similarity=0.082  Sum_probs=58.7

Q ss_pred             HHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccc
Q psy3822          19 RLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASRPTHA   98 (138)
Q Consensus        19 rrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   98 (138)
                      .+|++ ..-++|||.+.+...+ ++.+.-|+|=+|+...|.|.|.-++                                
T Consensus        70 L~~ik-~~l~~~pn~lPfqk~~-~t~kAAylvRqyvkhnLyDRlSTRP--------------------------------  115 (1431)
T KOG1240|consen   70 LEEIK-FALMKAPNCLPFQKVL-VTDKAAYLVRQYVKHNLYDRLSTRP--------------------------------  115 (1431)
T ss_pred             HHHHH-HHhhcCCcccchHHHH-HhhHHHHHHHHHHhhhhhhhhccch--------------------------------
Confidence            44555 5558999999999965 4677899999999999999986322                                


Q ss_pred             ccCCccHHHHHHHHHHHHHHHHhhhcCCC
Q psy3822          99 REYHFLDIEIKYGVAQVDSSEFTYLYVPS  127 (138)
Q Consensus        99 ~~~~l~E~eik~gl~QI~~aL~~fLH~~a  127 (138)
                         .|.+.|-|++++||+.|| .=||.-.
T Consensus       116 ---FL~~iEKkWiaFQLL~al-~qcH~~g  140 (1431)
T KOG1240|consen  116 ---FLVLIEKKWIAFQLLKAL-SQCHKLG  140 (1431)
T ss_pred             ---HHHHHHHHHHHHHHHHHH-HHHHHcC
Confidence               589999999999999999 9999744

>KOG1006|consensus

Probab=92.83  E-value=0.023  Score=48.64  Aligned_cols=89  Identities=12%  Similarity=0.038  Sum_probs=64.0

Q ss_pred             HHHHHHHHHHhhh-CCCCCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEV-YRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSAS   93 (138)
Q Consensus        15 ~e~lrrEi~~L~r-LrHPnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (138)
                      -.+|+.|.....+ =.-||||++|+.+.. ..-.|++||.+.-||-.+.+.--.                          
T Consensus       106 q~rll~e~d~~mks~~cp~IVkfyGa~F~-EGdcWiCMELMd~SlDklYk~vy~--------------------------  158 (361)
T KOG1006|consen  106 QKRLLMEHDTVMKSSNCPNIVKFYGALFS-EGDCWICMELMDISLDKLYKRVYS--------------------------  158 (361)
T ss_pred             HHHHHHHHHHHHhhcCCcHHHHHhhhhhc-CCceeeeHHHHhhhHHHHHHHHHH--------------------------
Confidence            3566777766554 579999999998774 456999999998887665542110                          


Q ss_pred             CCcccccCCccHHHHHHHHHHHHHHHHhhhcCCCCc-----ccCcce
Q psy3822          94 RPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPSTY-----LPSSVA  135 (138)
Q Consensus        94 ~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a~~-----~~~~~~  135 (138)
                          .+.-++.|..+-++..-..+|| +||-+.-+.     .||++.
T Consensus       159 ----vq~~~ipE~Ilg~ItvatV~AL-~yLK~~lkiIHRDvKPSNIL  200 (361)
T KOG1006|consen  159 ----VQKSRIPENILGHITVATVDAL-DYLKEELKIIHRDVKPSNIL  200 (361)
T ss_pred             ----HHhccCcHhhhhheeeeehhHH-HHHHHHhhhhhccCChhheE
Confidence                1122688888889999999999 998765544     377764

>KOG0603|consensus

Probab=92.35  E-value=0.1  Score=48.22  Aligned_cols=74  Identities=11%  Similarity=0.090  Sum_probs=62.5

Q ss_pred             HHHHHHHHhhhCC-CCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          17 ILRLGVKQLEVYR-HPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASR   94 (138)
Q Consensus        17 ~lrrEi~~L~rLr-HPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (138)
                      .-+.|-+++...+ ||.+|.+...++ ++..++++++++. ++|+.-+.+..                            
T Consensus        42 ~t~~er~il~~~~~~~f~v~lhyafq-t~~kl~l~ld~~rgg~lft~l~~~~----------------------------   92 (612)
T KOG0603|consen   42 HTKQERIILAFVHNTPFLVKLHYAFQ-TDGKLYLILDFLRGGDLFTRLSKEV----------------------------   92 (612)
T ss_pred             ccccHHHHHhhccCCCceeeeeeeec-cccchhHhhhhcccchhhhccccCC----------------------------
Confidence            6678889999988 999999998776 6788999999996 58876665322                            


Q ss_pred             CcccccCCccHHHHHHHHHHHHHHHHhhhcCCC
Q psy3822          95 PTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS  127 (138)
Q Consensus        95 ~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a  127 (138)
                             .++|++++.....++-|+ +++|..+
T Consensus        93 -------~f~~~~~~~~~aelaLal-d~lh~l~  117 (612)
T KOG0603|consen   93 -------MFDELDVAFYLAELALAL-DHLHKLG  117 (612)
T ss_pred             -------chHHHHHHHHHHHHHHHH-hhcchhH
Confidence                   589999999999999999 9999865

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=92.20  E-value=0.62  Score=37.00  Aligned_cols=80  Identities=14%  Similarity=0.103  Sum_probs=48.8

Q ss_pred             CcchHHHHHHHHHHHHhhhCCC--CCeeEEeceeeecCCeEEEEecccccc-HH-HHHhhcCCCCCCCCCCCCCCCCCCC
Q psy3822           9 KRKETVTEILRLGVKQLEVYRH--PKILSVLHPIEECPDALAFATEPVYAS-LA-SILAFQESPAPNHSTNPVTGGSGSS   84 (138)
Q Consensus         9 ~~~e~~~e~lrrEi~~L~rLrH--PnIL~l~e~~ee~~~~L~fVtE~V~~s-L~-~~L~~~~~~~~~~~~~~~~~~~~~~   84 (138)
                      ..+..+....++|...|++|+-  -++=+++. +    ..=+||||||.++ +. ..|+                     
T Consensus        64 ~~~~~~~~wa~kE~r~L~rl~~~Gv~vP~pi~-~----~~~~lvME~Ig~~~~~~~~Lk---------------------  117 (197)
T cd05146          64 NPRKIIRMWAEKEMHNLKRMQKAGIPCPEVVV-L----KKHVLVMSFIGDDQVPAPKLK---------------------  117 (197)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEE-e----cCCEEEEEEcCCCCccchhhh---------------------
Confidence            3344455566799999999853  22223332 1    2358899999752 21 1122                     


Q ss_pred             CCCCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCCCcc
Q psy3822          85 PPPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPSTYL  130 (138)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a~~~  130 (138)
                                     ...+++.++...+.|++++| ..||..++++
T Consensus       118 ---------------d~~~~~~~~~~i~~~i~~~l-~~l~H~~glV  147 (197)
T cd05146         118 ---------------DAKLNDEEMKNAYYQVLSMM-KQLYKECNLV  147 (197)
T ss_pred             ---------------ccccCHHHHHHHHHHHHHHH-HHHHHhCCee
Confidence                           12455567777889999999 9884444444

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>cd05151 ChoK Choline Kinase (ChoK)

Probab=90.40  E-value=0.36  Score=34.85  Aligned_cols=37  Identities=11%  Similarity=0.050  Sum_probs=24.9

Q ss_pred             HHHHHHHHhhhCCCCCee-EEeceeeecCCeEEEEeccccc
Q psy3822          17 ILRLGVKQLEVYRHPKIL-SVLHPIEECPDALAFATEPVYA   56 (138)
Q Consensus        17 ~lrrEi~~L~rLrHPnIL-~l~e~~ee~~~~L~fVtE~V~~   56 (138)
                      ..++|+..|+.|.+.+++ +++. ..  .+.-++|||++.+
T Consensus        38 ~~~~E~~~l~~l~~~~~~P~~~~-~~--~~~~~lv~e~i~G   75 (170)
T cd05151          38 NRENEAENSKLAAEAGIGPKLYY-FD--PETGVLITEFIEG   75 (170)
T ss_pred             CHHHHHHHHHHHHHhCCCCceEE-Ee--CCCCeEEEEecCC
Confidence            458999999998765543 3333 22  2234799999975

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=88.28  E-value=0.83  Score=41.51  Aligned_cols=79  Identities=13%  Similarity=0.124  Sum_probs=52.5

Q ss_pred             HHHHHHHhhhCC----CCCeeEEeceeeecCCeEEEEeccccc-cHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          18 LRLGVKQLEVYR----HPKILSVLHPIEECPDALAFATEPVYA-SLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        18 lrrEi~~L~rLr----HPnIL~l~e~~ee~~~~L~fVtE~V~~-sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      +.+|+..+.+++    +.+.|.+-+++.+-.+.-++|||||.| ++.++-.-....                        
T Consensus       203 ~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g------------------------  258 (537)
T PRK04750        203 LMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAG------------------------  258 (537)
T ss_pred             HHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcC------------------------
Confidence            467777777764    666677666666544568899999975 887753211100                        


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS  127 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a  127 (138)
                         .+.  ..+.+..++.++.||.. - .|.|.+-
T Consensus       259 ---~d~--~~la~~~v~~~~~Qif~-~-GffHaDp  286 (537)
T PRK04750        259 ---TDM--KLLAERGVEVFFTQVFR-D-GFFHADM  286 (537)
T ss_pred             ---CCH--HHHHHHHHHHHHHHHHh-C-CeeeCCC
Confidence               000  14778889999999986 5 7888764

>PLN02876 acyl-CoA dehydrogenase

Probab=85.86  E-value=1.8  Score=40.69  Aligned_cols=74  Identities=7%  Similarity=-0.061  Sum_probs=48.3

Q ss_pred             HHHHHHHHHhhhCC-CCCe--eEEeceeeec--CCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          16 EILRLGVKQLEVYR-HPKI--LSVLHPIEEC--PDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        16 e~lrrEi~~L~rLr-HPnI--L~l~e~~ee~--~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      ..+.+|+..|+.|. |++|  -+++...++.  -+.-|+|||+|.+..   +....                        
T Consensus        83 ~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flVME~v~G~~---~~~~~------------------------  135 (822)
T PLN02876         83 HAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYIMEYLEGRI---FVDPK------------------------  135 (822)
T ss_pred             HHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEEEEecCCcc---cCCcc------------------------
Confidence            46789999999996 6664  4444422221  135789999998732   11000                        


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCC
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVP  126 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~  126 (138)
                               -..++..+.+....|+.++| .-||.-
T Consensus       136 ---------~~~~~~~~r~~l~~~l~~~L-a~LH~v  161 (822)
T PLN02876        136 ---------LPGVAPERRRAIYRATAKVL-AALHSA  161 (822)
T ss_pred             ---------CCCCCHHHHHHHHHHHHHHH-HHHhCC
Confidence                     01355667777889999999 999973

>KOG0590|consensus

Probab=85.79  E-value=0.18  Score=46.14  Aligned_cols=77  Identities=16%  Similarity=0.164  Sum_probs=57.8

Q ss_pred             HHHHHHHHHHHHhhhCC-CCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYR-HPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLr-HPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      ...+..+.|..+=.++. |+|+++++++-. .....+..+|+.. +++++.+...+.                       
T Consensus        62 ~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~-~~~~~~~~~~~s~g~~~f~~i~~~~~-----------------------  117 (601)
T KOG0590|consen   62 DSSEHIDTETDIQKKLSKHSNTVHMIEPSS-SPRSYLLSLSYSDGGSLFSKISHPDS-----------------------  117 (601)
T ss_pred             chhhhcCccccccccccccccccccCCccC-CCcccccccCcccccccccccccCCc-----------------------
Confidence            34566677888888887 999999999665 4678999999964 577766631110                       


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhc
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLY  124 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH  124 (138)
                                -..++...+..+.|+..|+ .|+|
T Consensus       118 ----------~~~~~~~~~~~~~ql~s~l-~~~H  140 (601)
T KOG0590|consen  118 ----------TGTSSSSASRYLPQLNSGL-SYLH  140 (601)
T ss_pred             ----------cCCCCcchhhhhhhhccCc-cccC
Confidence                      0345567788999999999 9999

>KOG0601|consensus

Probab=85.58  E-value=0.79  Score=41.78  Aligned_cols=73  Identities=15%  Similarity=-0.071  Sum_probs=58.1

Q ss_pred             HHHHHHhhhCC-CCCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcc
Q psy3822          19 RLGVKQLEVYR-HPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASRPTH   97 (138)
Q Consensus        19 rrEi~~L~rLr-HPnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   97 (138)
                      .+|+..-.+++ |+|.+..+.+.+ +++.+++=||++..+|..+.....+                              
T Consensus       165 ~~~~~s~~~i~~~~~~v~~~~~~e-~~~~lfiqtE~~~~sl~~~~~~~~~------------------------------  213 (524)
T KOG0601|consen  165 LREFLSHHKIDSHENPVRDSPAWE-GSGILFIQTELCGESLQSYCHTPCN------------------------------  213 (524)
T ss_pred             cchhhcccccCccccccccCcccc-cCCcceeeeccccchhHHhhhcccc------------------------------
Confidence            35566666664 999999666555 6889999999999888877775432                              


Q ss_pred             cccCCccHHHHHHHHHHHHH----HHHhhhcCCC
Q psy3822          98 AREYHFLDIEIKYGVAQVDS----SEFTYLYVPS  127 (138)
Q Consensus        98 ~~~~~l~E~eik~gl~QI~~----aL~~fLH~~a  127 (138)
                          .+.+.+++..+.+...    || ..+|.+.
T Consensus       214 ----~~p~~~l~~~~~~~~~~~~~al-~~~hs~~  242 (524)
T KOG0601|consen  214 ----FLPDNLLWNSLRDWLSRDVTAL-SHLHSNN  242 (524)
T ss_pred             ----cCCchhhhhHHhhhhhcccccc-cccCCCc
Confidence                4788899999999999    99 9999876

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=83.77  E-value=8.1  Score=30.59  Aligned_cols=51  Identities=14%  Similarity=0.102  Sum_probs=38.3

Q ss_pred             hHHHHHHHHHHHHhhhCC------CCCeeEEeceeeecCCeEEEEecccc---c----cHHHHHh
Q psy3822          12 ETVTEILRLGVKQLEVYR------HPKILSVLHPIEECPDALAFATEPVY---A----SLASILA   63 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLr------HPnIL~l~e~~ee~~~~L~fVtE~V~---~----sL~~~L~   63 (138)
                      ....+..++|+..-..|.      +..|-++++.+ ||+..+.+|+|.|.   |    +|.++++
T Consensus        52 ~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~G~v-eT~~G~Glv~e~I~d~dG~~s~TL~~~l~  115 (199)
T PF10707_consen   52 KSRYRQNRRELRYYKQLSLRRGVDWSHIPRFYGFV-ETNLGLGLVVELIRDADGNISPTLEDYLK  115 (199)
T ss_pred             cchhHHHHHHHHHHHHHhhccCCcccccccEeEEE-ecCCceEEEEEEEECCCCCcCccHHHHHH
Confidence            345677788888888777      88888999955 57888999999983   2    4566664

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=83.04  E-value=2.6  Score=36.89  Aligned_cols=47  Identities=15%  Similarity=0.034  Sum_probs=31.2

Q ss_pred             HHHHHHHhhhCC----CCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhh
Q psy3822          18 LRLGVKQLEVYR----HPKILSVLHPIEECPDALAFATEPVY-ASLASILAF   64 (138)
Q Consensus        18 lrrEi~~L~rLr----HPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~   64 (138)
                      +.+|+..+.+++    |.+-+.+-.++.+-.+.-++||||+. .+|.+++..
T Consensus       200 f~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~  251 (437)
T TIGR01982       200 LRREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAAL  251 (437)
T ss_pred             HHHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHH
Confidence            466888888864    44445554444443345799999996 488887653

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=80.33  E-value=14  Score=30.49  Aligned_cols=76  Identities=8%  Similarity=-0.137  Sum_probs=50.7

Q ss_pred             HHHHHHHhhhCC-----CCCeeEEeceeeec-CCeEEEEeccccc--cHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          18 LRLGVKQLEVYR-----HPKILSVLHPIEEC-PDALAFATEPVYA--SLASILAFQESPAPNHSTNPVTGGSGSSPPPAN   89 (138)
Q Consensus        18 lrrEi~~L~rLr-----HPnIL~l~e~~ee~-~~~L~fVtE~V~~--sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (138)
                      ..+|...+.+|+     -|.+|-+.+.-... ...-+||||++.+  +|.+++.....                      
T Consensus        75 a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVte~l~~~~sL~~~~~~~~~----------------------  132 (268)
T PRK15123         75 ADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIITEDLAPTISLEDYCADWAT----------------------  132 (268)
T ss_pred             HHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEEeeCCCCccHHHHHHhhcc----------------------
Confidence            679999998873     45555554311100 2346899999975  79999863211                      


Q ss_pred             CCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC
Q psy3822          90 QSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS  127 (138)
Q Consensus        90 ~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a  127 (138)
                                 ...++.+.+..+.+|+..+ .=||+..
T Consensus       133 -----------~~~~~~~~~~ll~~la~~i-~~LH~~G  158 (268)
T PRK15123        133 -----------NPPDPRLKRMLIKRVATMV-RDMHAAG  158 (268)
T ss_pred             -----------cCCCHHHHHHHHHHHHHHH-HHHHHCc
Confidence                       0234567778899999999 9999754

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	138
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.71
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.7
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.69
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.69
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.64
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.63
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.63
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.63
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.63
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.62
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.62
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.62
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.6
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.6
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.55
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.48
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.47
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.46
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.46
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.45
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.45
3niz_A	311	Rhodanese family protein; structural genomics, str	99.45
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.45
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.44
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.44
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.44
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.43
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.43
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.43
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.43
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.42
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.42
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.42
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.42
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.42
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.41
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.41
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.41
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.41
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.4
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.4
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.4
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.4
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.4
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.4
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.39
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.39
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.39
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.38
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.38
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.38
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.38
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.38
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.38
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.38
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.37
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.37
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.37
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.37
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.37
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.37
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.37
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.36
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.36
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.36
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.36
3bhy_A	283	Death-associated protein kinase 3; death associate	99.36
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.36
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.36
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.36
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.35
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.35
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.35
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.35
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.35
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.35
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.35
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.35
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.34
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.34
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.34
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.34
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.34
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.34
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.34
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.34
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.34
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.34
3uqc_A	286	Probable conserved transmembrane protein; structur	99.34
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.34
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.34
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.34
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.34
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.33
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.33
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.33
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.33
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.33
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.33
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.33
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.33
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.33
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.33
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.33
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.33
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.33
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.33
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.33
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.33
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.33
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.33
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.32
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.32
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.32
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.32
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.32
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.32
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.32
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.32
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.32
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.32
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.31
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.31
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.31
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.31
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.31
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.31
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.31
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.31
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.31
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.31
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.31
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.3
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.3
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.3
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.3
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.3
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.3
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.3
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.3
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.3
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.29
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.29
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.29
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.29
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.29
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.29
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.29
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.29
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.29
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.29
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.29
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.28
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.28
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.28
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.28
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.28
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.28
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.28
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.27
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.27
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.27
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.27
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.27
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.26
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.26
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.26
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.26
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.26
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.26
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.26
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.26
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.26
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.25
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.25
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.25
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.25
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.25
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.25
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.24
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.24
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.24
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.24
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.24
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.24
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.24
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.23
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.23
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.23
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.22
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.22
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.22
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.22
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.21
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.21
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.21
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.21
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.21
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.21
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.2
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.2
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.2
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.2
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.2
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.2
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.19
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.19
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.19
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.19
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.19
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.19
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.19
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.18
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.18
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.17
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.17
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.17
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.17
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.17
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.17
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.16
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.16
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.16
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.15
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.15
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.14
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.14
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.14
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.14
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.14
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.13
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.13
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.12
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.1
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.1
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.07
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.07
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.06
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.05
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.04
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.02
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.02
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.01
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.01
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.0
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	98.99
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	98.98
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	98.95
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	98.89
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	98.88
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	98.76
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	98.26
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	97.96
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	97.84
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	95.76
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	95.51
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	91.97
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	91.19
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	91.13
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	88.53
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	83.84
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	83.82

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.71  E-value=3.3e-17  Score=137.24  Aligned_cols=97  Identities=15%  Similarity=0.108  Sum_probs=80.8

Q ss_pred             cCCCCcchHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCC
Q psy3822           5 LHKPKRKETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGS   83 (138)
Q Consensus         5 ~~K~~~~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~   83 (138)
                      +.|....+...+.+++|+.+|++|+|||||++++.+++ .+.+|||||||. ++|.++|.....                
T Consensus        57 i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~-~~~~yiVmEy~~gg~L~~~i~~~~~----------------  119 (350)
T 4b9d_A           57 INISRMSSKEREESRREVAVLANMKHPNIVQYRESFEE-NGSLYIVMDYCEGGDLFKRINAQKG----------------  119 (350)
T ss_dssp             EECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEEEEECCTTCBHHHHHHHTTT----------------
T ss_pred             EehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEE-CCEEEEEEeCCCCCcHHHHHHHcCC----------------
Confidence            34444455667889999999999999999999998874 789999999996 699999975431                


Q ss_pred             CCCCCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          84 SPPPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                       ..++|.+++.++.||+.|| +|||+..    .+.|++|.+
T Consensus       120 -----------------~~~~e~~~~~~~~qi~~aL-~ylH~~~IiHRDlKp~NILl  158 (350)
T 4b9d_A          120 -----------------VLFQEDQILDWFVQICLAL-KHVHDRKILHRDIKSQNIFL  158 (350)
T ss_dssp             -----------------CCCCHHHHHHHHHHHHHHH-HHHHHTTCEETTCCGGGEEE
T ss_pred             -----------------CCCCHHHHHHHHHHHHHHH-HHHHHCCeeeccCCHHHEEE
Confidence                             2589999999999999999 9999865    556888865

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.70  E-value=3.7e-17  Score=133.14  Aligned_cols=92  Identities=13%  Similarity=0.133  Sum_probs=77.0

Q ss_pred             CcchHHHHHHHHHHHHhhhCCCCCeeEEeceeeec---CCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCC
Q psy3822           9 KRKETVTEILRLGVKQLEVYRHPKILSVLHPIEEC---PDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSS   84 (138)
Q Consensus         9 ~~~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~---~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~   84 (138)
                      ...+...+.+++|+.+|++|+|||||++++.+++.   ++.+|||||||. ++|.++|.+..                  
T Consensus        63 ~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvmEy~~gg~L~~~l~~~~------------------  124 (290)
T 3fpq_A           63 KLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFK------------------  124 (290)
T ss_dssp             GSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEEECCCSCBHHHHHHHHS------------------
T ss_pred             hCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEEeCCCCCCHHHHHHhcC------------------
Confidence            33445668899999999999999999999988753   347999999995 79999998543                  


Q ss_pred             CCCCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC------CcccCccee
Q psy3822          85 PPPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS------TYLPSSVAF  136 (138)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a------~~~~~~~~~  136 (138)
                                       .+++.+++.++.||++|| +|||+..      .+.|++|.+
T Consensus       125 -----------------~l~~~~~~~~~~qi~~aL-~ylH~~~~~IiHRDlKp~NILl  164 (290)
T 3fpq_A          125 -----------------VMKIKVLRSWCRQILKGL-QFLHTRTPPIIHRDLKCDNIFI  164 (290)
T ss_dssp             -----------------SCCHHHHHHHHHHHHHHH-HHHHTSSSCCCCCCCCGGGEEE
T ss_pred             -----------------CCCHHHHHHHHHHHHHHH-HHHHHCCCCEEecccChhheeE
Confidence                             589999999999999999 9999865      345888765

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.69  E-value=4.1e-17  Score=134.74  Aligned_cols=87  Identities=13%  Similarity=0.150  Sum_probs=76.4

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      ...+.+++|+.+|++|+|||||++++.++ +.+.+|||||||. |+|.++|.+..                         
T Consensus        74 ~~~~~~~~E~~il~~l~HpnIv~l~~~~~-~~~~~yivmEy~~gG~L~~~i~~~~-------------------------  127 (311)
T 4aw0_A           74 NKVPYVTRERDVMSRLDHPFFVKLYFTFQ-DDEKLYFGLSYAKNGELLKYIRKIG-------------------------  127 (311)
T ss_dssp             TCHHHHHHHHHHHTTCCCTTBCCEEEEEE-CSSEEEEEECCCTTEEHHHHHHHHS-------------------------
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCeEEEEEE-eCCEEEEEEecCCCCCHHHHHHHcC-------------------------
Confidence            34578999999999999999999999886 5789999999996 69999998543                         


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                .|+|.+++.++.||+.|| +|||+..    .+.|++|.+
T Consensus       128 ----------~l~e~~~~~~~~qi~~al-~ylH~~~IiHRDlKPeNILl  165 (311)
T 4aw0_A          128 ----------SFDETCTRFYTAEIVSAL-EYLHGKGIIHRDLKPENILL  165 (311)
T ss_dssp             ----------SCCHHHHHHHHHHHHHHH-HHHHHTTEECSCCSGGGEEE
T ss_pred             ----------CCCHHHHHHHHHHHHHHH-HHHHHCCCccCCCCHHHeEE
Confidence                      699999999999999999 9999865    556888865

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.69  E-value=5.6e-17  Score=131.37  Aligned_cols=88  Identities=16%  Similarity=0.231  Sum_probs=75.9

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      +...+.+++|+.+|++|+|||||++++.++ +.+.+|+|||||.++|.+.|.+..                         
T Consensus        54 ~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~-~~~~~~ivmEy~~g~L~~~l~~~~-------------------------  107 (275)
T 3hyh_A           54 SDMQGRIEREISYLRLLRHPHIIKLYDVIK-SKDEIIMVIEYAGNELFDYIVQRD-------------------------  107 (275)
T ss_dssp             --CHHHHHHHHHHHHHCCCTTBCCEEEEEE-CSSEEEEEEECCCEEHHHHHHHSC-------------------------
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCCeEEEEEE-ECCEEEEEEeCCCCCHHHHHHHcC-------------------------
Confidence            344578899999999999999999999776 578999999999999999998543                         


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                .|+|.+++.++.||+.|| +|||+..    .+.|++|.+
T Consensus       108 ----------~l~e~~~~~~~~qi~~al-~ylH~~~IiHRDiKP~NILl  145 (275)
T 3hyh_A          108 ----------KMSEQEARRFFQQIISAV-EYCHRHKIVHRDLKPENLLL  145 (275)
T ss_dssp             ----------SCCHHHHHHHHHHHHHHH-HHHHHTTCCCCCCCTTTEEE
T ss_pred             ----------CCCHHHHHHHHHHHHHHH-HHHHHCCcccccCChHHeEE
Confidence                      689999999999999999 9999864    456888875

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.64  E-value=3.2e-16  Score=131.10  Aligned_cols=83  Identities=17%  Similarity=0.159  Sum_probs=73.1

Q ss_pred             HHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          16 EILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASR   94 (138)
Q Consensus        16 e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (138)
                      +.+.+|+.+|++|+|||||++++.+++ .+.+|||||||. ++|.+++.+.                             
T Consensus       116 ~~~~~Ei~il~~l~HpnIV~l~~~~~~-~~~~~ivmEy~~gg~L~~~l~~~-----------------------------  165 (346)
T 4fih_A          116 ELLFNEVVIMRDYQHENVVEMYNSYLV-GDELWVVMEFLEGGALTDIVTHT-----------------------------  165 (346)
T ss_dssp             GGGHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEEEECCCTTEEHHHHHHHS-----------------------------
T ss_pred             HHHHHHHHHHHhCCCCCCCcEEEEEEE-CCEEEEEEeCCCCCcHHHHHHcC-----------------------------
Confidence            567899999999999999999998874 789999999996 6999999742                             


Q ss_pred             CcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          95 PTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        95 ~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                             .|+|.+++.++.||+.|| +|||+..    .+.|++|.+
T Consensus       166 -------~l~e~~~~~~~~qi~~aL-~ylH~~~IiHRDlKp~NILl  203 (346)
T 4fih_A          166 -------RMNEEQIAAVCLAVLQAL-SVLHAQGVIHRDIKSDSILL  203 (346)
T ss_dssp             -------CCCHHHHHHHHHHHHHHH-HHHHHTTEECCCCSGGGEEE
T ss_pred             -------CCCHHHHHHHHHHHHHHH-HHHHHCCcccccCCHHHEEE
Confidence                   589999999999999999 9999865    556888875

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.63  E-value=6.1e-16  Score=130.52  Aligned_cols=96  Identities=13%  Similarity=0.133  Sum_probs=78.5

Q ss_pred             cCCCCcchHHHHHHHHHHHHhhhCCCCCeeEEeceeee-----cCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCC
Q psy3822           5 LHKPKRKETVTEILRLGVKQLEVYRHPKILSVLHPIEE-----CPDALAFATEPVYASLASILAFQESPAPNHSTNPVTG   79 (138)
Q Consensus         5 ~~K~~~~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee-----~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~   79 (138)
                      +.+........+.+.||+.+|++|+|||||++++.++.     +.+.+|+|||||.++|.++|....             
T Consensus        87 i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~~ivmE~~~g~L~~~i~~~~-------------  153 (398)
T 4b99_A           87 IPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQ-------------  153 (398)
T ss_dssp             ETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCEEEEEECCSEEHHHHHTSSS-------------
T ss_pred             ECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEEEEEEeCCCCCHHHHHHhcC-------------
Confidence            44444445556788899999999999999999997653     235799999999999999997432             


Q ss_pred             CCCCCCCCCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          80 GSGSSPPPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                            .|+|.+++.++.||+.|| +|||+..    .+.|++|.+
T Consensus       154 ----------------------~l~~~~~~~~~~qil~al-~ylH~~~iiHRDlKP~NIl~  191 (398)
T 4b99_A          154 ----------------------PLTLEHVRYFLYQLLRGL-KYMHSAQVIHRDLKPSNLLV  191 (398)
T ss_dssp             ----------------------CCCHHHHHHHHHHHHHHH-HHHHHTTCBCCCCCGGGEEE
T ss_pred             ----------------------CCCHHHHHHHHHHHHHHH-HHHHHCcCcCCCcCcccccc
Confidence                                  699999999999999999 9999854    556888764

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.63  E-value=7.7e-16  Score=125.03  Aligned_cols=93  Identities=17%  Similarity=0.100  Sum_probs=74.4

Q ss_pred             chHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCC-----------eEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCC
Q psy3822          11 KETVTEILRLGVKQLEVYRHPKILSVLHPIEECPD-----------ALAFATEPVY-ASLASILAFQESPAPNHSTNPVT   78 (138)
Q Consensus        11 ~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~-----------~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~   78 (138)
                      .+...+.+.+|+.+|++|+|||||++++.+++...           .+|+|||||. ++|.+++......          
T Consensus        43 ~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~----------  112 (299)
T 4g31_A           43 RELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTI----------  112 (299)
T ss_dssp             SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC----------CEEEEEEEECCCSCCHHHHHHTCCSG----------
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccCCCcEEEEEEecCCCCcHHHHHHhcCCC----------
Confidence            45566888999999999999999999998875332           4899999995 7999999854321          


Q ss_pred             CCCCCCCCCCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          79 GGSGSSPPPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                            ...++..++.++.||++|| +|||+..    .+.|++|.+
T Consensus       113 ----------------------~~~~~~~~~~i~~qi~~al-~ylH~~~IiHRDlKp~NILl  151 (299)
T 4g31_A          113 ----------------------EERERSVCLHIFLQIAEAV-EFLHSKGLMHRDLKPSNIFF  151 (299)
T ss_dssp             ----------------------GGSCHHHHHHHHHHHHHHH-HHHHHTTCCCCCCCGGGEEE
T ss_pred             ----------------------ChhHHHHHHHHHHHHHHHH-HHHHHCcCccccCcHHHeEE
Confidence                                  1345567889999999999 9999864    456888876

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.63  E-value=6.8e-16  Score=128.51  Aligned_cols=81  Identities=14%  Similarity=0.102  Sum_probs=71.5

Q ss_pred             HHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcc
Q psy3822          19 RLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASRPTH   97 (138)
Q Consensus        19 rrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   97 (138)
                      .+|+.+|++|+|||||++++.+++ .+.+|||||||. ++|.++|++..                               
T Consensus        98 ~~E~~il~~l~HpnIV~l~~~~~~-~~~~~ivmEy~~gg~L~~~l~~~~-------------------------------  145 (336)
T 4g3f_A           98 VEELVACAGLSSPRIVPLYGAVRE-GPWVNIFMELLEGGSLGQLIKQMG-------------------------------  145 (336)
T ss_dssp             THHHHTTTTCCCTTBCCEEEEEEE-TTEEEEEECCCTTCBHHHHHHHHS-------------------------------
T ss_pred             HHHHHHHHhCCCCCCCcEEEEEEE-CCEEEEEEeccCCCcHHHHHHHcC-------------------------------
Confidence            579999999999999999998874 779999999996 69999998543                               


Q ss_pred             cccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          98 AREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        98 ~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                          .|+|.+++.++.||++|| +|||+..    .+.|++|.+
T Consensus       146 ----~l~e~~~~~~~~qi~~aL-~ylH~~~IiHRDlKp~NILl  183 (336)
T 4g3f_A          146 ----CLPEDRALYYLGQALEGL-EYLHTRRILHGDVKADNVLL  183 (336)
T ss_dssp             ----SCCHHHHHHHHHHHHHHH-HHHHTTTEECSCCCGGGEEE
T ss_pred             ----CCCHHHHHHHHHHHHHHH-HHHHHCCceecccCHHHEEE
Confidence                689999999999999999 9999865    556888865

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.63  E-value=6.5e-16  Score=132.46  Aligned_cols=84  Identities=17%  Similarity=0.157  Sum_probs=73.4

Q ss_pred             HHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSAS   93 (138)
Q Consensus        15 ~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (138)
                      .+.+.+|+.+|++|+|||||++++.+++ .+.+|||||||. |+|.+++...                            
T Consensus       192 ~~~~~~Ei~il~~l~HpnIV~l~~~~~~-~~~~~iVmEy~~gG~L~~~i~~~----------------------------  242 (423)
T 4fie_A          192 RELLFNEVVIMRDYQHENVVEMYNSYLV-GDELWVVMEFLEGGALTDIVTHT----------------------------  242 (423)
T ss_dssp             GGGHHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEEEEECCTTEEHHHHHHHS----------------------------
T ss_pred             HHHHHHHHHHHHhCCCCCCCceEEEEEE-CCEEEEEEeCCCCCcHHHHHhcc----------------------------
Confidence            3567899999999999999999998874 789999999995 6999999732                            


Q ss_pred             CCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          94 RPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        94 ~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                              .|+|.+++.++.||+.|| +|||+..    .+.|++|.+
T Consensus       243 --------~l~e~~~~~~~~qil~aL-~ylH~~~IiHRDiKp~NILl  280 (423)
T 4fie_A          243 --------RMNEEQIAAVCLAVLQAL-SVLHAQGVIHRDIKSDSILL  280 (423)
T ss_dssp             --------CCCHHHHHHHHHHHHHHH-HHHHHTTEECCCCSTTTEEE
T ss_pred             --------CCCHHHHHHHHHHHHHHH-HHHHHCCeecccCCHHHEEE
Confidence                    589999999999999999 9999865    556888865

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.62  E-value=1.3e-15  Score=125.11  Aligned_cols=90  Identities=22%  Similarity=0.180  Sum_probs=75.0

Q ss_pred             cchHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          10 RKETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPA   88 (138)
Q Consensus        10 ~~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (138)
                      ......+.+++|+.+|++|+|||||++++.+.  .+.+|+|||||. |+|.++|....                      
T Consensus        71 ~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~--~~~~~iVmEy~~gGsL~~~l~~~~----------------------  126 (307)
T 3omv_A           71 PTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT--KDNLAIVTQWCEGSSLYKHLHVQE----------------------  126 (307)
T ss_dssp             CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC--SSSCEEEEECCSSCBHHHHHHTSC----------------------
T ss_pred             CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE--CCeEEEEEEcCCCCCHHHHHhhcC----------------------
Confidence            34556788999999999999999999999553  467999999996 79999997432                      


Q ss_pred             CCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          89 NQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        89 ~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                  ..|++.++..++.||++|| +|||+..    .+.|++|.+
T Consensus       127 ------------~~l~~~~~~~i~~qia~gL-~yLH~~~IiHRDlKp~NILl  165 (307)
T 3omv_A          127 ------------TKFQMFQLIDIARQTAQGM-DYLHAKNIIHRDMKSNNIFL  165 (307)
T ss_dssp             ------------CCCCHHHHHHHHHHHHHHH-HHHHHTTCBCSCCCSSSEEE
T ss_pred             ------------CCCCHHHHHHHHHHHHHHH-HHHHHCCccCCccCHHHEEE
Confidence                        1589999999999999999 9999854    445888764

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.62  E-value=1.4e-15  Score=123.83  Aligned_cols=102  Identities=13%  Similarity=0.081  Sum_probs=77.0

Q ss_pred             chHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          11 KETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPAN   89 (138)
Q Consensus        11 ~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (138)
                      .+...+.+++|+.+|++|+|||||++++.+.+ ++.+++|||||. |+|.++|.........                  
T Consensus        55 ~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~-~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~------------------  115 (299)
T 4asz_A           55 SDNARKDFHREAELLTNLQHEHIVKFYGVCVE-GDPLIMVFEYMKHGDLNKFLRAHGPDAVL------------------  115 (299)
T ss_dssp             CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSSEEEEEECCTTCBHHHHHHHTSHHHHH------------------
T ss_pred             ChHHHHHHHHHHHHHHhCCCCCCccEEEEEee-CCEEEEEEEcCCCCcHHHHHHhcCccccc------------------
Confidence            34556788999999999999999999997764 678999999995 7999999864310000                  


Q ss_pred             CCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          90 QSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        90 ~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                          .........|++.++..++.||++|| +|||+..    .+.|++|..
T Consensus       116 ----~~~~~~~~~l~~~~~~~i~~qia~gl-~yLH~~~iiHRDlKp~NILl  161 (299)
T 4asz_A          116 ----MAEGNPPTELTQSQMLHIAQQIAAGM-VYLASQHFVHRDLATRNCLV  161 (299)
T ss_dssp             ----C----CCCCCCHHHHHHHHHHHHHHH-HHHHHTTCCCSCCSGGGEEE
T ss_pred             ----ccccCCCCCCCHHHHHHHHHHHHHHH-HHHHhCCcccCccCHhhEEE
Confidence                00000123699999999999999999 9999854    445777754

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.62  E-value=9.1e-17  Score=131.92  Aligned_cols=84  Identities=14%  Similarity=0.161  Sum_probs=68.5

Q ss_pred             HHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          16 EILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASR   94 (138)
Q Consensus        16 e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (138)
                      ..+++|+.+|++|+|||||++++.++ +.+.+|||||||. ++|.++|.+..                            
T Consensus        71 ~~~~~E~~il~~l~HpnIv~l~~~~~-~~~~~~ivmEy~~gg~L~~~l~~~~----------------------------  121 (304)
T 3ubd_A           71 VRTKMERDILVEVNHPFIVKLHYAFQ-TEGKLYLILDFLRGGDLFTRLSKEV----------------------------  121 (304)
T ss_dssp             C------CCCCCCCCTTEECEEEEEE-ETTEEEEEECCCTTCEEHHHHHHHC----------------------------
T ss_pred             HHHHHHHHHHHHCCCCCCCeEEEEEE-ECCEEEEEEEcCCCCCHHHHHHhcC----------------------------
Confidence            35789999999999999999999887 4789999999996 79999998543                            


Q ss_pred             CcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          95 PTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        95 ~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                             .|+|.+++.++.||+.|| +|||+..    .+.|++|.+
T Consensus       122 -------~l~e~~~~~~~~qi~~aL-~ylH~~~IiHRDlKp~NILl  159 (304)
T 3ubd_A          122 -------MFTEEDVKFYLAELALAL-DHLHSLGIIYRDLKPENILL  159 (304)
T ss_dssp             -------CCCHHHHHHHHHHHHHHH-HHHHHTTCCCSSCCGGGEEE
T ss_pred             -------CCCHHHHHHHHHHHHHHH-HHHHHCCCcCCCCCHHHeEE
Confidence                   689999999999999999 9999864    556888765

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.60  E-value=2.3e-15  Score=122.98  Aligned_cols=105  Identities=14%  Similarity=0.176  Sum_probs=77.1

Q ss_pred             chHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          11 KETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPAN   89 (138)
Q Consensus        11 ~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (138)
                      .+...+.+++|+.+|++|+|||||++++.+.+ .+.+++|||||. |+|.++|.........          +       
T Consensus        69 ~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~----------~-------  130 (308)
T 4gt4_A           69 EGPLREEFRHEAMLRARLQHPNVVCLLGVVTK-DQPLSMIFSYCSHGDLHEFLVMRSPHSDV----------G-------  130 (308)
T ss_dssp             CC-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSSCEEEEECCSSCBHHHHHHTTCSSCCC----------C-------
T ss_pred             ChHHHHHHHHHHHHHHhCCCCCCCCcceEEEE-CCEEEEEEEcCCCCcHHHHHHhhCccccc----------c-------
Confidence            34456788999999999999999999997764 678999999995 7999999854321100          0       


Q ss_pred             CCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          90 QSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        90 ~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                        .....+.....|++.++..++.||++|| +|||+..    .+.|++|..
T Consensus       131 --~~~~~~~~~~~l~~~~~~~i~~qia~gl-~yLH~~~iiHRDLK~~NILl  178 (308)
T 4gt4_A          131 --STDDDRTVKSALEPPDFVHLVAQIAAGM-EYLSSHHVVHKDLATRNVLV  178 (308)
T ss_dssp             -------CCEECCCCHHHHHHHHHHHHHHH-HHHHHTTCCCSCCSGGGEEE
T ss_pred             --ccccccccccCCCHHHHHHHHHHHHHHH-HHHHhCCCCCCCccccceEE
Confidence              0000112234699999999999999999 9999854    445777753

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.60  E-value=3.3e-15  Score=123.04  Aligned_cols=104  Identities=13%  Similarity=0.051  Sum_probs=77.5

Q ss_pred             chHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          11 KETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPAN   89 (138)
Q Consensus        11 ~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (138)
                      .+...+.+++|+.+|++|+|||||++++.+.+ .+.+|+|||||. |+|.++|.+........                 
T Consensus        83 ~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~-~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~-----------------  144 (329)
T 4aoj_A           83 SESARQDFQREAELLTMLQHQHIVRFFGVCTE-GRPLLMVFEYMRHGDLNRFLRSHGPDAKLL-----------------  144 (329)
T ss_dssp             SHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSSEEEEEECCTTCBHHHHHHTSSCC---------------------
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEE-CCEEEEEEEcCCCCcHHHHHHhcCcccccc-----------------
Confidence            34556789999999999999999999997764 678999999995 79999998654211000                 


Q ss_pred             CCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          90 QSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        90 ~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                         ..........|++.++..++.||++|| +|||+..    .+.|++|..
T Consensus       145 ---~~~~~~~~~~l~~~~~~~i~~qia~gl-~yLH~~~iiHRDLKp~NILl  191 (329)
T 4aoj_A          145 ---AGGEDVAPGPLGLGQLLAVASQVAAGM-VYLAGLHFVHRDLATRNCLV  191 (329)
T ss_dssp             ----------CCSCCHHHHHHHHHHHHHHH-HHHHHTTCCCSCCCGGGEEE
T ss_pred             ---cccccccCCCCCHHHHHHHHHHHHHHH-HHHhcCCeecccccHhhEEE
Confidence               000111223699999999999999999 9999754    445877754

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.55  E-value=1e-14  Score=127.87  Aligned_cols=88  Identities=17%  Similarity=0.202  Sum_probs=75.6

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      ...+.+++|+.+|++|+|||||++++.++ +.+.+|||||||. |+|.++|....                         
T Consensus       196 ~~~~~~~~Ei~il~~l~hpnIv~l~~~~~-~~~~~~iv~E~~~gg~L~~~i~~~~-------------------------  249 (573)
T 3uto_A          196 SDKETVRKEIQTMSVLRHPTLVNLHDAFE-DDNEMVMIYEFMSGGELFEKVADEH-------------------------  249 (573)
T ss_dssp             HHHHHHHHHHHHHHHTCCTTBCCEEEEEE-CSSEEEEEEECCCCCBHHHHHTCTT-------------------------
T ss_pred             hhHHHHHHHHHHHHhCCCCCCCeEEEEEE-ECCEEEEEEeecCCCcHHHHHHHhC-------------------------
Confidence            34578899999999999999999999886 5789999999995 69999996432                         


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                               ..|+|.+++.++.||++|| +|||+..    .+.|+++.+
T Consensus       250 ---------~~l~e~~~~~~~~qi~~al-~ylH~~~iiHRDlKp~Nill  288 (573)
T 3uto_A          250 ---------NKMSEDEAVEYMRQVCKGL-CHMHENNYVHLDLKPENIMF  288 (573)
T ss_dssp             ---------SCEEHHHHHHHHHHHHHHH-HHHHHTTEECCCCCGGGEEE
T ss_pred             ---------CCCCHHHHHHHHHHHHHHH-HHHHHCCeeeccCChhhccc
Confidence                     2699999999999999999 9999864    556888766

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.48  E-value=8.2e-14  Score=116.00  Aligned_cols=106  Identities=12%  Similarity=0.051  Sum_probs=77.4

Q ss_pred             chHHHHHHHHHHHHhhhCCC-CCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          11 KETVTEILRLGVKQLEVYRH-PKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPA   88 (138)
Q Consensus        11 ~e~~~e~lrrEi~~L~rLrH-PnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (138)
                      .+...+.+.+|+.+|.+|+| ||||++++.+.+..+.+++|||||. |+|.++|+.......            ....  
T Consensus       107 ~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~------------~~~~--  172 (353)
T 4ase_A          107 THSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFV------------PYKV--  172 (353)
T ss_dssp             CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBC------------CC----
T ss_pred             ChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccc------------cccc--
Confidence            34456778999999999976 9999999987665678999999995 799999986542100            0000  


Q ss_pred             CCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          89 NQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        89 ~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                           .+.......|++.++..++.||++|| +|||+..    .+.|++|..
T Consensus       173 -----~~~~~~~~~l~~~~~~~~~~qia~gl-~yLH~~~iiHRDLK~~NILl  218 (353)
T 4ase_A          173 -----APEDLYKDFLTLEHLICYSFQVAKGM-EFLASRKCIHRDLAARNILL  218 (353)
T ss_dssp             ----------CTTCBCHHHHHHHHHHHHHHH-HHHHHTTCCCSCCSGGGEEE
T ss_pred             -----cchhhccccCCHHHHHHHHHHHHHHH-HhHhhCCeecCccCccceee
Confidence                 00011123699999999999999999 9999854    455777754

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.47  E-value=1.9e-13  Score=110.63  Aligned_cols=90  Identities=17%  Similarity=0.193  Sum_probs=76.5

Q ss_pred             cchHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          10 RKETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPA   88 (138)
Q Consensus        10 ~~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (138)
                      ......+.+.+|+.+|++|+||||+++++.++ +.+.+|+||||+. ++|.+++....                      
T Consensus        53 ~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~----------------------  109 (328)
T 3fe3_A           53 LNPTSLQKLFREVRIMKILNHPNIVKLFEVIE-TEKTLYLIMEYASGGEVFDYLVAHG----------------------  109 (328)
T ss_dssp             SCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-CSSEEEEEECCCTTCBHHHHHHHHC----------------------
T ss_pred             CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-ECCEEEEEEECCCCCcHHHHHHHcC----------------------
Confidence            34556788899999999999999999999776 5779999999995 69999997543                      


Q ss_pred             CCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          89 NQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        89 ~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                   .+++.+++.++.||+.|| +|||+..    .+.|++|.+
T Consensus       110 -------------~l~~~~~~~~~~qi~~al-~~lH~~~ivHrDlkp~NIll  147 (328)
T 3fe3_A          110 -------------RMKEKEARSKFRQIVSAV-QYCHQKRIVHRDLKAENLLL  147 (328)
T ss_dssp             -------------CCCHHHHHHHHHHHHHHH-HHHHHTTCCCSCCCGGGEEE
T ss_pred             -------------CCCHHHHHHHHHHHHHHH-HHHHHCCEeccCCCHHHEEE
Confidence                         588999999999999999 9999864    445888765

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.46  E-value=2.6e-13  Score=110.37  Aligned_cols=92  Identities=13%  Similarity=0.142  Sum_probs=77.8

Q ss_pred             cchHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          10 RKETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPA   88 (138)
Q Consensus        10 ~~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (138)
                      ..+...+.+++|+.+|++|+||||+++++.+++ .+.+++||||+. ++|.+++.....                     
T Consensus        65 ~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~---------------------  122 (389)
T 3gni_B           65 CSNEMVTFLQGELHVSKLFNHPNIVPYRATFIA-DNELWVVTSFMAYGSAKDLICTHFM---------------------  122 (389)
T ss_dssp             SCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEEEEECCTTCBHHHHHHHTCT---------------------
T ss_pred             cChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEE-CCEEEEEEEccCCCCHHHHHhhhcc---------------------
Confidence            345677899999999999999999999998774 679999999995 799999985421                     


Q ss_pred             CCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          89 NQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        89 ~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                  ..+++.+++.++.||+.|| +|||+..    .+.|++|.+
T Consensus       123 ------------~~~~~~~~~~~~~qi~~~l-~~LH~~~ivHrDlkp~NIll  161 (389)
T 3gni_B          123 ------------DGMNELAIAYILQGVLKAL-DYIHHMGYVHRSVKASHILI  161 (389)
T ss_dssp             ------------TCCCHHHHHHHHHHHHHHH-HHHHHTTEECCCCSGGGEEE
T ss_pred             ------------cCCCHHHHHHHHHHHHHHH-HHHHhCCeecCCCCHHHEEE
Confidence                        1589999999999999999 9999854    455888765

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.46  E-value=1.3e-13  Score=107.45  Aligned_cols=89  Identities=16%  Similarity=0.156  Sum_probs=74.9

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      +...+.+.+|+.+|++|+||||+++++.++ +.+.+++||||+.++|.+++....                         
T Consensus        41 ~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~~~l~~~~~~~~-------------------------   94 (288)
T 1ob3_A           41 EGIPSTTIREISILKELKHSNIVKLYDVIH-TKKRLVLVFEHLDQDLKKLLDVCE-------------------------   94 (288)
T ss_dssp             GCCCHHHHHHHHGGGGCCCTTBCCEEEEEE-CSSCEEEEEECCSEEHHHHHHTST-------------------------
T ss_pred             cccchhHHHHHHHHHhcCCCCEeeeeeEEc-cCCeEEEEEEecCCCHHHHHHhcc-------------------------
Confidence            344567889999999999999999999776 467899999999999999997432                         


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                               ..+++.+++.++.||++|| +|||+..    .+.|++|.+
T Consensus        95 ---------~~~~~~~~~~~~~qi~~~l-~~lH~~~i~H~dlkp~Nil~  133 (288)
T 1ob3_A           95 ---------GGLESVTAKSFLLQLLNGI-AYCHDRRVLHRDLKPQNLLI  133 (288)
T ss_dssp             ---------TCCCHHHHHHHHHHHHHHH-HHHHHTTCCCSCCCGGGEEE
T ss_pred             ---------cCCCHHHHHHHHHHHHHHH-HHHHHCCeecCCCCHHHEEE
Confidence                     1588999999999999999 9999864    445888765

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.45  E-value=2.1e-13  Score=108.88  Aligned_cols=90  Identities=16%  Similarity=0.088  Sum_probs=72.3

Q ss_pred             cchHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          10 RKETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPAN   89 (138)
Q Consensus        10 ~~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (138)
                      ..+...+.+.+|+.+|++|+||||+++++.+++ .+.+++||||+.++|.+++....                       
T Consensus        72 ~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~~~~~L~~~~~~~~-----------------------  127 (329)
T 3gbz_A           72 EEEGVPGTAIREVSLLKELQHRNIIELKSVIHH-NHRLHLIFEYAENDLKKYMDKNP-----------------------  127 (329)
T ss_dssp             --------CHHHHHHGGGCCCTTBCCEEEEEEE-TTEEEEEEECCSEEHHHHHHHCT-----------------------
T ss_pred             cccccchhHHHHHHHHHHcCCCCcceEEEEEec-CCEEEEEEecCCCCHHHHHhhcC-----------------------
Confidence            344556778899999999999999999997764 77999999999999999997542                       


Q ss_pred             CCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          90 QSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        90 ~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                  .+++.+++.++.||++|| +|||+..    .+.|++|.+
T Consensus       128 ------------~~~~~~~~~i~~ql~~~l-~~LH~~~ivH~Dlkp~NIll  165 (329)
T 3gbz_A          128 ------------DVSMRVIKSFLYQLINGV-NFCHSRRCLHRDLKPQNLLL  165 (329)
T ss_dssp             ------------TCCHHHHHHHHHHHHHHH-HHHHHTTCCCSCCCGGGEEE
T ss_pred             ------------CCCHHHHHHHHHHHHHHH-HHHHhCCEECCCCCHHHEEE
Confidence                        488899999999999999 9999854    445888876

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.45  E-value=3.3e-13  Score=105.14  Aligned_cols=92  Identities=12%  Similarity=0.044  Sum_probs=76.7

Q ss_pred             CcchHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822           9 KRKETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPA   88 (138)
Q Consensus         9 ~~~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (138)
                      ...+...+.+.+|+.+|++|+||||+++++.+++ .+.+++||||+.++|.+.+....                      
T Consensus        39 ~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~~~~~l~~~~~~~~----------------------   95 (292)
T 3o0g_A           39 DDDEGVPSSALREICLLKELKHKNIVRLHDVLHS-DKKLTLVFEFCDQDLKKYFDSCN----------------------   95 (292)
T ss_dssp             CSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEE-TTEEEEEEECCSEEHHHHHHHTT----------------------
T ss_pred             CCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEe-CCEEEEEEecCCCCHHHHHHhCC----------------------
Confidence            3445566788999999999999999999997764 67999999999988888876432                      


Q ss_pred             CCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          89 NQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        89 ~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                  ..+++.+++.++.||++|| +|||+..    .+.|++|.+
T Consensus        96 ------------~~l~~~~~~~~~~ql~~~l-~~lH~~~ivH~dikp~Nil~  134 (292)
T 3o0g_A           96 ------------GDLDPEIVKSFLFQLLKGL-GFCHSRNVLHRDLKPQNLLI  134 (292)
T ss_dssp             ------------TCCCHHHHHHHHHHHHHHH-HHHHHTTEECCCCSGGGEEE
T ss_pred             ------------CCCCHHHHHHHHHHHHHHH-HHHHhCCeecCCCCHHHEEE
Confidence                        1589999999999999999 9999864    445888765

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.45  E-value=2.6e-13  Score=107.77  Aligned_cols=90  Identities=18%  Similarity=0.183  Sum_probs=75.0

Q ss_pred             chHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          11 KETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        11 ~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      .+...+.+.+|+.+|++|+||||+++++.++ +.+.+++||||+.++|.+.+....                        
T Consensus        59 ~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-~~~~~~lv~e~~~~~l~~~~~~~~------------------------  113 (311)
T 3niz_A           59 DEGIPSTAIREISLLKELHHPNIVSLIDVIH-SERCLTLVFEFMEKDLKKVLDENK------------------------  113 (311)
T ss_dssp             --CHHHHHHHHHHHHHHCCCTTBCCEEEEEC-CSSCEEEEEECCSEEHHHHHHTCT------------------------
T ss_pred             cchhhHHHHHHHHHHHHcCCCCEeeeeeEEc-cCCEEEEEEcCCCCCHHHHHHhcc------------------------
Confidence            3445678899999999999999999999776 467899999999999999987432                        


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                ..+++.+++.++.||++|| +|||+..    .+.|++|.+
T Consensus       114 ----------~~~~~~~~~~~~~qi~~~l-~~LH~~~ivH~Dikp~NIl~  152 (311)
T 3niz_A          114 ----------TGLQDSQIKIYLYQLLRGV-AHCHQHRILHRDLKPQNLLI  152 (311)
T ss_dssp             ----------TCCCHHHHHHHHHHHHHHH-HHHHHTTEECCCCCGGGEEE
T ss_pred             ----------CCCCHHHHHHHHHHHHHHH-HHHHHCCcccCCCchHhEEE
Confidence                      1589999999999999999 9999754    445888765

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.45  E-value=2.1e-13  Score=113.27  Aligned_cols=81  Identities=14%  Similarity=0.064  Sum_probs=70.8

Q ss_pred             HHHHHHHHHhhhC-CCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          16 EILRLGVKQLEVY-RHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSAS   93 (138)
Q Consensus        16 e~lrrEi~~L~rL-rHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (138)
                      ..+.+|+++|+++ .||||+++++.++ +++.+|+||||+. ++|.+++.                              
T Consensus        64 ~~~~~E~~~l~~~~~h~nIv~l~~~~~-~~~~~~lvmE~~~g~~L~~~~~------------------------------  112 (361)
T 4f9c_A           64 IRIAAELQCLTVAGGQDNVMGVKYCFR-KNDHVVIAMPYLEHESFLDILN------------------------------  112 (361)
T ss_dssp             HHHHHHHHHHHHTCSBTTBCCCSEEEE-ETTEEEEEEECCCCCCHHHHHT------------------------------
T ss_pred             HHHHHHHHHHHHhcCCCCCceEEEEEE-ECCEEEEEEeCCCcccHHHHHc------------------------------
Confidence            4578999999999 5999999999887 4789999999995 79999985                              


Q ss_pred             CCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          94 RPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        94 ~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                              .|+|.+++.++.||+.|| +|||+..    .+.|++|.+
T Consensus       113 --------~l~~~~~~~~~~qll~al-~ylH~~gIiHRDiKPeNiLl  150 (361)
T 4f9c_A          113 --------SLSFQEVREYMLNLFKAL-KRIHQFGIVHRDVKPSNFLY  150 (361)
T ss_dssp             --------TCCHHHHHHHHHHHHHHH-HHHHHTTEECSCCSGGGEEE
T ss_pred             --------CCCHHHHHHHHHHHHHHH-HHHHHCCeEeCcCCHHHeEE
Confidence                    488899999999999999 9999855    556888865

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.44  E-value=4.3e-13  Score=109.61  Aligned_cols=89  Identities=13%  Similarity=0.147  Sum_probs=75.7

Q ss_pred             chHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          11 KETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPAN   89 (138)
Q Consensus        11 ~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (138)
                      .....+.+++|+.+|++|+||||+++++.++ +.+.+|+||||+. ++|.+.+....                       
T Consensus        68 ~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~-~~~~~~lv~e~~~gg~L~~~l~~~~-----------------------  123 (362)
T 2bdw_A           68 SARDFQKLEREARICRKLQHPNIVRLHDSIQ-EESFHYLVFDLVTGGELFEDIVARE-----------------------  123 (362)
T ss_dssp             CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-CSSEEEEEECCCCSCBHHHHHTTCS-----------------------
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEE-eCCEEEEEEecCCCCCHHHHHHHcC-----------------------
Confidence            3455688999999999999999999999776 4679999999996 69999987432                       


Q ss_pred             CCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          90 QSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        90 ~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                  .+++.+++.++.||++|| .|||+..    .+.|++|.+
T Consensus       124 ------------~~~~~~~~~~~~qi~~al-~~lH~~~ivH~Dlkp~NIll  161 (362)
T 2bdw_A          124 ------------FYSEADASHCIQQILESI-AYCHSNGIVHRNLKPENLLL  161 (362)
T ss_dssp             ------------CCCHHHHHHHHHHHHHHH-HHHHHTTCBCCCCSGGGEEE
T ss_pred             ------------CCCHHHHHHHHHHHHHHH-HHHHHCCeEeccCchHHEEE
Confidence                        588999999999999999 9999864    445888876

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.44  E-value=3.9e-13  Score=108.56  Aligned_cols=73  Identities=15%  Similarity=0.016  Sum_probs=62.1

Q ss_pred             HHHHHHHHhhhCCCCCeeEEeceeeecC---CeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          17 ILRLGVKQLEVYRHPKILSVLHPIEECP---DALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        17 ~lrrEi~~L~rLrHPnIL~l~e~~ee~~---~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ...+|+..|.+|+|||||++++.+.+..   ..+|+|||||. ++|.++|...                           
T Consensus        43 ~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~---------------------------   95 (303)
T 3hmm_A           43 FREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY---------------------------   95 (303)
T ss_dssp             HHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHHC---------------------------
T ss_pred             HHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecCCCCCcHHHHHHhC---------------------------
Confidence            3457888889999999999999877643   26999999996 7999999742                           


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCC
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVP  126 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~  126 (138)
                               .+++.++..++.||+.|| +|||++
T Consensus        96 ---------~l~~~~~~~i~~~ia~gl-~ylH~~  119 (303)
T 3hmm_A           96 ---------TVTVEGMIKLALSTASGL-AHLHME  119 (303)
T ss_dssp             ---------CBCHHHHHHHHHHHHHHH-HHHHCC
T ss_pred             ---------CCCHHHHHHHHHHHHHHH-HHHHHh
Confidence                     477788899999999999 999975

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.44  E-value=3.6e-13  Score=102.36  Aligned_cols=92  Identities=14%  Similarity=0.129  Sum_probs=75.6

Q ss_pred             chHHHHHHHHHHHHhhhCCCCCeeEEeceeeec-CCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          11 KETVTEILRLGVKQLEVYRHPKILSVLHPIEEC-PDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPA   88 (138)
Q Consensus        11 ~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~-~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (138)
                      .....+.+.+|+.+|++|+||||+++++.+.+. .+.+++||||+. ++|.+++.....                     
T Consensus        47 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---------------------  105 (271)
T 3kmu_A           47 STRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTN---------------------  105 (271)
T ss_dssp             CHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEECCTTCBHHHHHHSCSS---------------------
T ss_pred             CHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeecccCCCcHHHHHhhccc---------------------
Confidence            345567899999999999999999999977643 268999999996 699999985331                     


Q ss_pred             CCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC------CcccCccee
Q psy3822          89 NQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS------TYLPSSVAF  136 (138)
Q Consensus        89 ~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a------~~~~~~~~~  136 (138)
                                  ..+++.++..++.||++|| .|||+..      .+.|++|.+
T Consensus       106 ------------~~~~~~~~~~i~~qi~~~l-~~lH~~~~~i~H~dikp~Nil~  146 (271)
T 3kmu_A          106 ------------FVVDQSQAVKFALDMARGM-AFLHTLEPLIPRHALNSRSVMI  146 (271)
T ss_dssp             ------------CCCCHHHHHHHHHHHHHHH-HHHTTSSSCCTTCCCSGGGEEE
T ss_pred             ------------CCCCHHHHHHHHHHHHHHH-HHHhcCCCceecCCCccceEEE
Confidence                        2589999999999999999 9999855      334888765

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.43  E-value=7.4e-13  Score=103.97  Aligned_cols=90  Identities=17%  Similarity=0.189  Sum_probs=76.3

Q ss_pred             chHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          11 KETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPAN   89 (138)
Q Consensus        11 ~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (138)
                      .+...+.+.+|+.+|++|+||||+++++.+.+ .+.+++||||+. ++|.+++....                       
T Consensus        47 ~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~-----------------------  102 (310)
T 3s95_A           47 DEETQRTFLKEVKVMRCLEHPNVLKFIGVLYK-DKRLNFITEYIKGGTLRGIIKSMD-----------------------  102 (310)
T ss_dssp             CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEE-TTEEEEEEECCTTCBHHHHHHHCC-----------------------
T ss_pred             CHHHHHHHHHHHHHHHhCCCcCcccEEEEEec-CCeeEEEEEecCCCcHHHHHHhcc-----------------------
Confidence            35567889999999999999999999998775 678999999995 69999998532                       


Q ss_pred             CCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          90 QSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        90 ~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                 ..+++.++..++.||++|| +|||+..    .+.|++|.+
T Consensus       103 -----------~~~~~~~~~~i~~qi~~al-~~lH~~~ivH~dlkp~Nil~  141 (310)
T 3s95_A          103 -----------SQYPWSQRVSFAKDIASGM-AYLHSMNIIHRDLNSHNCLV  141 (310)
T ss_dssp             -----------TTSCHHHHHHHHHHHHHHH-HHHHHTTEECSCCSTTSEEE
T ss_pred             -----------CCCCHHHHHHHHHHHHHHH-HHHHhCCccCCCCCcCeEEE
Confidence                       1588899999999999999 9999854    445888765

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.43  E-value=6e-13  Score=104.70  Aligned_cols=90  Identities=13%  Similarity=0.043  Sum_probs=76.9

Q ss_pred             cchHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          10 RKETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPA   88 (138)
Q Consensus        10 ~~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (138)
                      ..+...+.+.+|+..|.+|+||||+++++.++ +.+.+++||||+. ++|.+++....                      
T Consensus        50 ~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~-~~~~~~lv~e~~~g~~L~~~l~~~~----------------------  106 (294)
T 4eqm_A           50 EKEETLKRFEREVHNSSQLSHQNIVSMIDVDE-EDDCYYLVMEYIEGPTLSEYIESHG----------------------  106 (294)
T ss_dssp             CCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEE-CSSEEEEEEECCCSCBHHHHHHHHC----------------------
T ss_pred             ccHHHHHHHHHHHHHHhcCCCCCCceEEEeee-eCCeEEEEEeCCCCCCHHHHHHhcC----------------------
Confidence            44667789999999999999999999999765 5779999999995 59999998543                      


Q ss_pred             CCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          89 NQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        89 ~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                   .+++.++..++.||++|| +|||+..    .+.|++|.+
T Consensus       107 -------------~~~~~~~~~~~~qi~~~l-~~lH~~~i~H~Dlkp~Nil~  144 (294)
T 4eqm_A          107 -------------PLSVDTAINFTNQILDGI-KHAHDMRIVHRDIKPQNILI  144 (294)
T ss_dssp             -------------SCCHHHHHHHHHHHHHHH-HHHHHTTCCCCCCCGGGEEE
T ss_pred             -------------CCCHHHHHHHHHHHHHHH-HHHHHCCcccCCCCHHHEEE
Confidence                         588999999999999999 9999754    445888765

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.43  E-value=5e-13  Score=111.33  Aligned_cols=96  Identities=11%  Similarity=0.085  Sum_probs=77.7

Q ss_pred             cCCCCcchHHHHHHHHHHHHhhhCCCCCeeEEeceeee----cCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCC
Q psy3822           5 LHKPKRKETVTEILRLGVKQLEVYRHPKILSVLHPIEE----CPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGG   80 (138)
Q Consensus         5 ~~K~~~~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee----~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~   80 (138)
                      +.+........+.+.+|+.+|++|+||||+++++.+..    +.+.+|+|||++.++|.+++....              
T Consensus        86 i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~--------------  151 (458)
T 3rp9_A           86 ILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPV--------------  151 (458)
T ss_dssp             ECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEECCCSEEHHHHHHSSC--------------
T ss_pred             echhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceEEEEEeccccchhhhcccCC--------------
Confidence            33333445566888999999999999999999997642    235799999999999999997432              


Q ss_pred             CCCCCCCCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          81 SGSSPPPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                           .|++.+++.++.||+.|| +|||+..    .+.|++|.+
T Consensus       152 ---------------------~l~~~~~~~~~~qi~~aL-~~LH~~~iiHrDlKp~NILl  189 (458)
T 3rp9_A          152 ---------------------YLTELHIKTLLYNLLVGV-KYVHSAGILHRDLKPANCLV  189 (458)
T ss_dssp             ---------------------CCCHHHHHHHHHHHHHHH-HHHHHTTCBCCCCCGGGEEE
T ss_pred             ---------------------CCCHHHHHHHHHHHHHHH-HHHHhCCcCCCCCChhhEEE
Confidence                                 589999999999999999 9999754    445888765

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.43  E-value=5.2e-13  Score=120.90  Aligned_cols=87  Identities=15%  Similarity=0.186  Sum_probs=73.4

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      .....-++++++|..++|||||++++.++ +.+.+|||||||. |+|.++|.+..                         
T Consensus       234 ~~~~~E~~~l~ll~~~~HP~IV~l~~~f~-~~~~lylVmEy~~GGdL~~~l~~~~-------------------------  287 (689)
T 3v5w_A          234 TLALNERIMLSLVSTGDCPFIVCMSYAFH-TPDKLSFILDLMNGGDLHYHLSQHG-------------------------  287 (689)
T ss_dssp             HHHHHHHHHHHHHSSSCCTTBCCEEEEEE-CSSEEEEEECCCCSCBHHHHHHHHC-------------------------
T ss_pred             HHHHHHHHHHHHHhhCCCCCEeEEEEEEE-ECCEEEEEEecCCCCcHHHHHHhcC-------------------------
Confidence            33444466788888999999999999887 5789999999995 79999998543                         


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                .|+|.+++.++.||+.|| +|||+..    .+.|.+|.+
T Consensus       288 ----------~l~E~~a~~y~~qIl~aL-~yLH~~gIiHRDLKPeNILl  325 (689)
T 3v5w_A          288 ----------VFSEADMRFYAAEIILGL-EHMHNRFVVYRDLKPANILL  325 (689)
T ss_dssp             ----------CCCHHHHHHHHHHHHHHH-HHHHTTTEECCCCSGGGEEE
T ss_pred             ----------CCCHHHHHHHHHHHHHHH-HHHHHCCccccCCchHHeEE
Confidence                      699999999999999999 9999865    556888765

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.42  E-value=8.8e-13  Score=105.78  Aligned_cols=87  Identities=17%  Similarity=0.233  Sum_probs=74.0

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ..+.+++|+.+|++|+||||+++++.+++ .+.+++||||+. ++|.+.+....                          
T Consensus        44 ~~~~~~~E~~~l~~l~hpnIv~~~~~~~~-~~~~~lv~e~~~g~~L~~~l~~~~--------------------------   96 (321)
T 1tki_A           44 DQVLVKKEISILNIARHRNILHLHESFES-MEELVMIFEFISGLDIFERINTSA--------------------------   96 (321)
T ss_dssp             HHHHHHHHHHHHHHSCCTTBCCEEEEEEE-TTEEEEEECCCCCCBHHHHHTSSS--------------------------
T ss_pred             cHHHHHHHHHHHHhCCCCCCCeEeEEEec-CCEEEEEEEeCCCCCHHHHHHhcC--------------------------
Confidence            34678999999999999999999998764 679999999996 59999996432                          


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                              ..+++.+++.++.||++|| +|||+..    .+.|++|.+
T Consensus        97 --------~~~~~~~~~~i~~qi~~al-~~lH~~givH~Dlkp~NIl~  135 (321)
T 1tki_A           97 --------FELNEREIVSYVHQVCEAL-QFLHSHNIGHFDIRPENIIY  135 (321)
T ss_dssp             --------CCCCHHHHHHHHHHHHHHH-HHHHHTTEECCCCCGGGEEE
T ss_pred             --------CCCCHHHHHHHHHHHHHHH-HHHHHCCCCcCCCCHHHEEE
Confidence                    2589999999999999999 9999854    556888765

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.42  E-value=5e-13  Score=111.38  Aligned_cols=96  Identities=11%  Similarity=0.079  Sum_probs=78.6

Q ss_pred             cCCCCcchHHHHHHHHHHHHhhhCCCCCeeEEeceeeecC----CeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCC
Q psy3822           5 LHKPKRKETVTEILRLGVKQLEVYRHPKILSVLHPIEECP----DALAFATEPVYASLASILAFQESPAPNHSTNPVTGG   80 (138)
Q Consensus         5 ~~K~~~~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~----~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~   80 (138)
                      +.+........+.+.+|+.+|++|+||||+++++.+....    +.+|+||||+.++|.+++....              
T Consensus        59 ~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~--------------  124 (432)
T 3n9x_A           59 VNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPI--------------  124 (432)
T ss_dssp             ECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEEECCSEEHHHHHHSSC--------------
T ss_pred             eCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeEEEEEecCCcCHHHHHhccC--------------
Confidence            3333344556688899999999999999999999776532    5799999999999999997421              


Q ss_pred             CCCCCCCCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          81 SGSSPPPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                           .|++.+++.++.||+.|| .|||+..    .+.|++|.+
T Consensus       125 ---------------------~l~~~~~~~i~~qil~aL-~~LH~~givHrDlkp~NILl  162 (432)
T 3n9x_A          125 ---------------------FLTEEHIKTILYNLLLGE-NFIHESGIIHRDLKPANCLL  162 (432)
T ss_dssp             ---------------------CCCHHHHHHHHHHHHHHH-HHHHHTTEECCCCCGGGEEE
T ss_pred             ---------------------CCCHHHHHHHHHHHHHHH-HHHHHCCCCCCCCCHHHeEE
Confidence                                 589999999999999999 9999864    456888865

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.42  E-value=5.3e-13  Score=103.99  Aligned_cols=115  Identities=14%  Similarity=0.117  Sum_probs=79.1

Q ss_pred             CcchHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCC
Q psy3822           9 KRKETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPP   87 (138)
Q Consensus         9 ~~~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~   87 (138)
                      .......+.+.+|+.+|++|+||||+++++.+. ..+.+++||||+. ++|.+++.......+.    ..+..+..... 
T Consensus        64 ~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~----~~~~~~~~~~~-  137 (314)
T 2ivs_A           64 NASPSELRDLLSEFNVLKQVNHPHVIKLYGACS-QDGPLLLIVEYAKYGSLRGFLRESRKVGPG----YLGSGGSRNSS-  137 (314)
T ss_dssp             TCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSSCEEEEECCTTCBHHHHHHHTTTSTTE----EC----------
T ss_pred             CCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEe-cCCceEEEEeecCCCCHHHHHHHHhhccCC----ccccccccccc-
Confidence            344556788999999999999999999999776 4678999999996 7999999875432100    00000000000 


Q ss_pred             CCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          88 ANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        88 ~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                            .........+++.++..++.||++|| +|||+..    .+.|++|.+
T Consensus       138 ------~~~~~~~~~~~~~~~~~i~~qi~~~l-~~lH~~~ivH~dikp~NIli  183 (314)
T 2ivs_A          138 ------SLDHPDERALTMGDLISFAWQISQGM-QYLAEMKLVHRDLAARNILV  183 (314)
T ss_dssp             -------------CEECHHHHHHHHHHHHHHH-HHHHHTTEECCCCSGGGEEE
T ss_pred             ------ccccccccCcCHHHHHHHHHHHHHHH-HHHHHCCCcccccchheEEE
Confidence                  00011223689999999999999999 9999864    445888765

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.42  E-value=6.2e-13  Score=105.06  Aligned_cols=115  Identities=11%  Similarity=0.064  Sum_probs=78.4

Q ss_pred             CcchHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCC
Q psy3822           9 KRKETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPP   87 (138)
Q Consensus         9 ~~~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~   87 (138)
                      ...+...+.+++|+.+|++|+||||+++++.++ +.+.+++||||+. ++|.+++.........   +..   ...-...
T Consensus        88 ~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~---~~~---~~~~~~~  160 (343)
T 1luf_A           88 EASADMQADFQREAALMAEFDNPNIVKLLGVCA-VGKPMCLLFEYMAYGDLNEFLRSMSPHTVC---SLS---HSDLSTR  160 (343)
T ss_dssp             TCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSSCEEEEECCTTCBHHHHHHHTCC--------------------
T ss_pred             ccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCCceEEEEecCCCCcHHHHHHHhCccccc---ccc---ccccccc
Confidence            444566788999999999999999999999776 4678999999996 6999999864321000   000   0000000


Q ss_pred             CCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          88 ANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        88 ~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                      .     .........+++.++..++.||++|| .|||+..    .+.|++|.+
T Consensus       161 ~-----~~~~~~~~~l~~~~~~~i~~qi~~~l-~~LH~~~ivH~Dlkp~NIl~  207 (343)
T 1luf_A          161 A-----RVSSPGPPPLSCAEQLCIARQVAAGM-AYLSERKFVHRDLATRNCLV  207 (343)
T ss_dssp             -------------CCCCHHHHHHHHHHHHHHH-HHHHHTTCCCSCCSGGGEEE
T ss_pred             c-----cccccCCCCCCHHHHHHHHHHHHHHH-HHHHhCCeecCCCCcceEEE
Confidence            0     00000113699999999999999999 9999864    445888765

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.42  E-value=6.2e-13  Score=103.83  Aligned_cols=94  Identities=19%  Similarity=0.138  Sum_probs=74.7

Q ss_pred             chHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCC---------------------------------------------
Q psy3822          11 KETVTEILRLGVKQLEVYRHPKILSVLHPIEECPD---------------------------------------------   45 (138)
Q Consensus        11 ~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~---------------------------------------------   45 (138)
                      .+...+.+++|+.+|++|+||||+++++.+.+...                                             
T Consensus        44 ~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  123 (332)
T 3qd2_B           44 RELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNT  123 (332)
T ss_dssp             TTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHHHC------------------------------------
T ss_pred             chhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhhhhhhhccccccccccCCCcccccccceeeccccCcccc
Confidence            34566889999999999999999999998765432                                             


Q ss_pred             -----------eEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCccHHHHHHHHH
Q psy3822          46 -----------ALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASRPTHAREYHFLDIEIKYGVA  113 (138)
Q Consensus        46 -----------~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~E~eik~gl~  113 (138)
                                 .+++||||+. ++|.+++......                                ...++..+..++.
T Consensus       124 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~--------------------------------~~~~~~~~~~i~~  171 (332)
T 3qd2_B          124 VGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSL--------------------------------EDREHGVCLHIFI  171 (332)
T ss_dssp             --------CCCEEEEEEECCCSSCHHHHHHTCCSG--------------------------------GGSCHHHHHHHHH
T ss_pred             cccccCCCCCceEEEEEEecCCCCHHHHHhcccCc--------------------------------cchhhHHHHHHHH
Confidence                       4899999996 6999999854321                                1356667899999


Q ss_pred             HHHHHHHhhhcCCC----CcccCcceee
Q psy3822         114 QVDSSEFTYLYVPS----TYLPSSVAFC  137 (138)
Q Consensus       114 QI~~aL~~fLH~~a----~~~~~~~~~~  137 (138)
                      ||+.|| +|||+..    .+.|++|.+.
T Consensus       172 qi~~aL-~~LH~~~ivH~Dlkp~NIll~  198 (332)
T 3qd2_B          172 QIAEAV-EFLHSKGLMHRDLKPSNIFFT  198 (332)
T ss_dssp             HHHHHH-HHHHHTTEECCCCCGGGEEEC
T ss_pred             HHHHHH-HHHHhCCeeecCCCcccEEEe
Confidence            999999 9999754    5568888753

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.41  E-value=8e-13  Score=111.97  Aligned_cols=92  Identities=12%  Similarity=0.108  Sum_probs=77.6

Q ss_pred             CcchHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCC
Q psy3822           9 KRKETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPP   87 (138)
Q Consensus         9 ~~~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~   87 (138)
                      .......+.+++|+.+|++|+||||+++++.++ +.+.+|+||||+. ++|.+.+....                     
T Consensus        48 ~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-~~~~~~lv~E~~~gg~L~~~i~~~~---------------------  105 (444)
T 3soa_A           48 KLSARDHQKLEREARICRLLKHPNIVRLHDSIS-EEGHHYLIFDLVTGGELFEDIVARE---------------------  105 (444)
T ss_dssp             SCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEE-CSSEEEEEECCCBCCBHHHHHHHCS---------------------
T ss_pred             cCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEE-ECCEEEEEEEeCCCCCHHHHHHHcC---------------------
Confidence            334455678999999999999999999999776 4779999999996 69999998542                     


Q ss_pred             CCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcceee
Q psy3822          88 ANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAFC  137 (138)
Q Consensus        88 ~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~~  137 (138)
                                    .++|.+++.++.||++|| .|||+..    .+.|++|.+.
T Consensus       106 --------------~~~e~~~~~i~~qil~aL-~~lH~~givHrDlKp~NIll~  144 (444)
T 3soa_A          106 --------------YYSEADASHCIQQILEAV-LHCHQMGVVHRNLKPENLLLA  144 (444)
T ss_dssp             --------------CCCHHHHHHHHHHHHHHH-HHHHHTTCBCCCCSSTTEEES
T ss_pred             --------------CCCHHHHHHHHHHHHHHH-HHHHHCCccccCCCHHHEEEe
Confidence                          589999999999999999 9999864    4568888763

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.41  E-value=5.6e-13  Score=102.95  Aligned_cols=89  Identities=12%  Similarity=0.059  Sum_probs=75.2

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      ....+.+.+|+.+|++|+||||+++++.++ +.+..++||||+. ++|.+++....                        
T Consensus        53 ~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~------------------------  107 (289)
T 4fvq_A           53 RNYSESFFEAASMMSKLSHKHLVLNYGVCV-CGDENILVQEFVKFGSLDTYLKKNK------------------------  107 (289)
T ss_dssp             GGGHHHHHHHHHHHHTSCCTTBCCEEEEEC-CTTCCEEEEECCTTCBHHHHHHHTG------------------------
T ss_pred             HHHHHHHHHHHHHHHhCCCCCEeEEEEEEE-eCCCCEEEEECCCCCCHHHHHHhCC------------------------
Confidence            345578899999999999999999999776 4678999999996 79999998542                        


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                ..+++.++..++.||++|| .|||+..    .+.|++|.+
T Consensus       108 ----------~~~~~~~~~~i~~qi~~~L-~~LH~~~ivH~Dlkp~NIll  146 (289)
T 4fvq_A          108 ----------NCINILWKLEVAKQLAAAM-HFLEENTLIHGNVCAKNILL  146 (289)
T ss_dssp             ----------GGCCHHHHHHHHHHHHHHH-HHHHHTTCCCCCCCGGGEEE
T ss_pred             ----------CCCCHHHHHHHHHHHHHHH-HHHhhCCeECCCcCcceEEE
Confidence                      1488899999999999999 9999764    445888876

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.41  E-value=7.3e-13  Score=108.97  Aligned_cols=86  Identities=21%  Similarity=0.235  Sum_probs=73.9

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ..+.+++|+.+|++|+||||+++++.++ +.+.+++||||+. ++|.+++....                          
T Consensus        58 ~~~~~~~E~~il~~l~hpnIv~l~~~~~-~~~~~~lv~e~~~gg~L~~~l~~~~--------------------------  110 (361)
T 2yab_A           58 CREEIEREVSILRQVLHPNIITLHDVYE-NRTDVVLILELVSGGELFDFLAQKE--------------------------  110 (361)
T ss_dssp             CHHHHHHHHHHHTTCCCTTBCCEEEEEE-CSSEEEEEEECCCSCBHHHHHTTCS--------------------------
T ss_pred             HHHHHHHHHHHHHhCCCcCCCcEEEEEE-eCCEEEEEEEcCCCCcHHHHHHhcC--------------------------
Confidence            3577899999999999999999999776 5779999999994 79999997432                          


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                               .+++.+++.++.||++|| +|||+..    .+.|++|.+
T Consensus       111 ---------~l~~~~~~~i~~qi~~aL-~~LH~~givHrDlkp~NIll  148 (361)
T 2yab_A          111 ---------SLSEEEATSFIKQILDGV-NYLHTKKIAHFDLKPENIML  148 (361)
T ss_dssp             ---------CCBHHHHHHHHHHHHHHH-HHHHHTTEECCCCSGGGEEE
T ss_pred             ---------CCCHHHHHHHHHHHHHHH-HHHHHCCcccCCCCHHHEEE
Confidence                     589999999999999999 9999854    455888765

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.41  E-value=3.6e-13  Score=107.00  Aligned_cols=92  Identities=11%  Similarity=0.063  Sum_probs=75.2

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSAS   93 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (138)
                      ..+.+.+|+.+|++|+||||+++++.++ +.+.+++||||+.++|.+++.......                        
T Consensus        46 ~~~~~~~E~~~l~~l~hp~iv~~~~~~~-~~~~~~lv~e~~~~~L~~~l~~~~~~~------------------------  100 (317)
T 2pmi_A           46 TPSTAIREISLMKELKHENIVRLYDVIH-TENKLTLVFEFMDNDLKKYMDSRTVGN------------------------  100 (317)
T ss_dssp             SCHHHHHHHHHHTTCCBTTBCCEEEEEC-CTTEEEEEEECCCCBHHHHHHHHHSSS------------------------
T ss_pred             cHHHHHHHHHHHHhcCCCCcceEEEEEE-ECCeEEEEEEecCCCHHHHHHhccccc------------------------
Confidence            3466789999999999999999999776 467999999999999999997653211                        


Q ss_pred             CCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          94 RPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        94 ~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                           ....+++.+++.++.||++|| +|||+..    .+.|++|.+
T Consensus       101 -----~~~~~~~~~~~~~~~qi~~aL-~~lH~~~ivH~Dlkp~NIl~  141 (317)
T 2pmi_A          101 -----TPRGLELNLVKYFQWQLLQGL-AFCHENKILHRDLKPQNLLI  141 (317)
T ss_dssp             -----CCCCCCHHHHHHHHHHHHHHH-HHHHHTTEECCCCCGGGEEE
T ss_pred             -----cccCCCHHHHHHHHHHHHHHH-HHHHHCCeeeCCCChHHeEE
Confidence                 012588999999999999999 9999854    455888765

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.40  E-value=1.2e-12  Score=101.60  Aligned_cols=90  Identities=12%  Similarity=0.132  Sum_probs=75.1

Q ss_pred             chHHHHHHHHHHHHhhhCCCCCeeEEeceeeec---CCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCC
Q psy3822          11 KETVTEILRLGVKQLEVYRHPKILSVLHPIEEC---PDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPP   86 (138)
Q Consensus        11 ~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~---~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~   86 (138)
                      .....+.+++|+.+|++|+||||+++++.+++.   ++.+++||||+. ++|.+++....                    
T Consensus        65 ~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--------------------  124 (290)
T 1t4h_A           65 TKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFK--------------------  124 (290)
T ss_dssp             CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEECCCSCBHHHHHHHHS--------------------
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEEEEecCCCCHHHHHHHcc--------------------
Confidence            345578899999999999999999999987653   357999999995 69999997542                    


Q ss_pred             CCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC------CcccCccee
Q psy3822          87 PANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS------TYLPSSVAF  136 (138)
Q Consensus        87 ~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a------~~~~~~~~~  136 (138)
                                     .+++.+++.++.||+.|| .|||+..      .+.|++|.+
T Consensus       125 ---------------~~~~~~~~~~~~qi~~~l-~~lH~~~~~i~H~dikp~Nil~  164 (290)
T 1t4h_A          125 ---------------VMKIKVLRSWCRQILKGL-QFLHTRTPPIIHRDLKCDNIFI  164 (290)
T ss_dssp             ---------------SCCHHHHHHHHHHHHHHH-HHHHTSSSCCCCSCCCGGGEEE
T ss_pred             ---------------CCCHHHHHHHHHHHHHHH-HHHHcCCCCEEECCCCHHHEEE
Confidence                           578889999999999999 9999875      334887765

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.40  E-value=8.1e-13  Score=106.98  Aligned_cols=89  Identities=17%  Similarity=0.172  Sum_probs=74.5

Q ss_pred             HHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSAS   93 (138)
Q Consensus        15 ~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (138)
                      .+.+++|+.+|++|+||||+++++.+++ .+.+|+||||+. ++|.+.+......                         
T Consensus        70 ~~~~~~E~~~l~~l~hpnIv~~~~~~~~-~~~~~lv~e~~~g~~L~~~l~~~~~~-------------------------  123 (351)
T 3c0i_A           70 TEDLKREASICHMLKHPHIVELLETYSS-DGMLYMVFEFMDGADLCFEIVKRADA-------------------------  123 (351)
T ss_dssp             HHHHHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEEEEECCSSCBHHHHHHHHHHT-------------------------
T ss_pred             HHHHHHHHHHHHhCCCCCCCcEEEEEEe-CCEEEEEEeCCCCCCHHHHHHHhccc-------------------------
Confidence            4678999999999999999999997765 679999999996 7999888754311                         


Q ss_pred             CCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          94 RPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        94 ~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                            ...++|.+++.++.||++|| +|||+..    .+.|++|.+
T Consensus       124 ------~~~~~~~~~~~i~~qi~~al-~~lH~~~ivHrDlkp~NIl~  163 (351)
T 3c0i_A          124 ------GFVYSEAVASHYMRQILEAL-RYCHDNNIIHRDVKPHCVLL  163 (351)
T ss_dssp             ------TCCCCHHHHHHHHHHHHHHH-HHHHHTTEECSCCSGGGEEE
T ss_pred             ------CCCCCHHHHHHHHHHHHHHH-HHHHHCCceeccCChHHeEE
Confidence                  12589999999999999999 9999864    455888876

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.40  E-value=1.2e-12  Score=104.71  Aligned_cols=86  Identities=20%  Similarity=0.210  Sum_probs=73.5

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ..+.+++|+.+|++|+||||+++++.++ +.+.+++||||+. ++|.+++....                          
T Consensus        57 ~~~~~~~E~~~l~~l~hp~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~--------------------------  109 (326)
T 2y0a_A           57 SREDIEREVSILKEIQHPNVITLHEVYE-NKTDVILILELVAGGELFDFLAEKE--------------------------  109 (326)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEEE-CSSEEEEEEECCCSCBHHHHHTTSS--------------------------
T ss_pred             hHHHHHHHHHHHHhCCCCCCCcEEEEEE-eCCEEEEEEEcCCCCCHHHHHHhcC--------------------------
Confidence            3577899999999999999999999776 5779999999995 69999997422                          


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                               .+++.+++.++.||+.|| .|||+..    .+.|++|.+
T Consensus       110 ---------~~~~~~~~~i~~qi~~al-~~lH~~~ivH~Dlkp~NIll  147 (326)
T 2y0a_A          110 ---------SLTEEEATEFLKQILNGV-YYLHSLQIAHFDLKPENIML  147 (326)
T ss_dssp             ---------CCBHHHHHHHHHHHHHHH-HHHHHTTEECCCCCGGGEEE
T ss_pred             ---------CcCHHHHHHHHHHHHHHH-HHHHHCCeEcCCCCHHHEEE
Confidence                     589999999999999999 9999754    455888765

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.40  E-value=1.1e-12  Score=101.70  Aligned_cols=90  Identities=17%  Similarity=0.220  Sum_probs=75.2

Q ss_pred             cchHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          10 RKETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPA   88 (138)
Q Consensus        10 ~~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (138)
                      ..+...+.+.+|+..|++|+||||+++++.+.  .+.+++||||+. ++|.+++....                      
T Consensus        55 ~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~----------------------  110 (281)
T 1mp8_A           55 TSDSVREKFLQEALTMRQFDHPHIVKLIGVIT--ENPVWIIMELCTLGELRSFLQVRK----------------------  110 (281)
T ss_dssp             TSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC--SSSCEEEEECCTTEEHHHHHHHTT----------------------
T ss_pred             CCHHHHHHHHHHHHHHHhCCCCccceEEEEEc--cCccEEEEecCCCCCHHHHHHhcC----------------------
Confidence            44567788999999999999999999999764  457999999996 69999997532                      


Q ss_pred             CCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          89 NQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        89 ~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                  ..+++.++..++.||++|| +|||+..    .+.|++|.+
T Consensus       111 ------------~~~~~~~~~~~~~qi~~~l-~~lH~~~i~H~dlkp~Nil~  149 (281)
T 1mp8_A          111 ------------YSLDLASLILYAYQLSTAL-AYLESKRFVHRDIAARNVLV  149 (281)
T ss_dssp             ------------TTSCHHHHHHHHHHHHHHH-HHHHHTTCCCSCCSGGGEEE
T ss_pred             ------------CCCCHHHHHHHHHHHHHHH-HHHHhCCeecccccHHHEEE
Confidence                        2588899999999999999 9999854    445888765

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.40  E-value=9.6e-13  Score=102.32  Aligned_cols=92  Identities=11%  Similarity=0.012  Sum_probs=76.0

Q ss_pred             cchHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          10 RKETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPA   88 (138)
Q Consensus        10 ~~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (138)
                      ......+.+.+|+.+|++|+||||+++++.+.+..+..++||||+. ++|.+++....                      
T Consensus        65 ~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~----------------------  122 (298)
T 3f66_A           65 TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNET----------------------  122 (298)
T ss_dssp             CSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEEECCTTCBHHHHHHCTT----------------------
T ss_pred             CCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEEEeCCCCCCHHHHHHhcc----------------------
Confidence            3345567889999999999999999999976666678999999996 59999997432                      


Q ss_pred             CCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          89 NQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        89 ~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                  ..+++.++..++.||++|| +|||+..    .+.|++|.+
T Consensus       123 ------------~~~~~~~~~~i~~ql~~~l-~~lH~~~i~H~dikp~Nil~  161 (298)
T 3f66_A          123 ------------HNPTVKDLIGFGLQVAKGM-KYLASKKFVHRDLAARNCML  161 (298)
T ss_dssp             ------------CCCCHHHHHHHHHHHHHHH-HHHHHTTCCCSCCSGGGEEE
T ss_pred             ------------cCCCHHHHHHHHHHHHHHH-HHHHhCCccCCCCchheEEE
Confidence                        1578889999999999999 9999754    445888765

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.39  E-value=8.4e-13  Score=107.65  Aligned_cols=85  Identities=15%  Similarity=0.196  Sum_probs=73.5

Q ss_pred             HHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASR   94 (138)
Q Consensus        15 ~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (138)
                      .+.+.+|+.+|++|+||||+++++.++ +.+.+++||||+.++|.+.+....                            
T Consensus        53 ~~~~~~E~~~l~~l~hpnIv~l~~~~~-~~~~~~lv~E~~~g~l~~~l~~~~----------------------------  103 (336)
T 3h4j_B           53 HMRVEREISYLKLLRHPHIIKLYDVIT-TPTDIVMVIEYAGGELFDYIVEKK----------------------------  103 (336)
T ss_dssp             SHHHHHHHHHHTTCCCTTBCCEEEEEE-CSSEEEEEECCCCEEHHHHHHHHC----------------------------
T ss_pred             HHHHHHHHHHHHhCCCCCCCeEEEEEE-eCCEEEEEEECCCCcHHHHHHHcC----------------------------
Confidence            357899999999999999999999776 577999999999999999997543                            


Q ss_pred             CcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          95 PTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        95 ~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                             .+++.+++.++.||++|| +|||+..    .+.|++|.+
T Consensus       104 -------~l~~~~~~~i~~qi~~aL-~~LH~~givH~Dlkp~NIll  141 (336)
T 3h4j_B          104 -------RMTEDEGRRFFQQIICAI-EYCHRHKIVHRDLKPENLLL  141 (336)
T ss_dssp             -------SCCHHHHHHHHHHHHHHH-HHHHHHTCCCCCCSTTTEEE
T ss_pred             -------CCCHHHHHHHHHHHHHHH-HHHHHCCeEecCCchhhEEE
Confidence                   588999999999999999 9999753    455888765

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.39  E-value=1e-12  Score=105.20  Aligned_cols=90  Identities=16%  Similarity=0.134  Sum_probs=75.5

Q ss_pred             chHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          11 KETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPAN   89 (138)
Q Consensus        11 ~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (138)
                      .+...+.+.+|+.+|++|+||||+++++.++ +.+.+++||||+. ++|.+++....                       
T Consensus        90 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~-----------------------  145 (325)
T 3kul_A           90 TERQRRDFLSEASIMGQFDHPNIIRLEGVVT-RGRLAMIVTEYMENGSLDTFLRTHD-----------------------  145 (325)
T ss_dssp             CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-GGGCCEEEEECCTTCBHHHHHHTTT-----------------------
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEE-eCCccEEEeeCCCCCcHHHHHHhcc-----------------------
Confidence            4555678899999999999999999999776 4678999999995 69999997432                       


Q ss_pred             CCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          90 QSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        90 ~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                 ..+++.++..++.||+.|| .|||+..    .+.|++|.+
T Consensus       146 -----------~~~~~~~~~~i~~qi~~~L-~~LH~~~ivH~Dlkp~NIll  184 (325)
T 3kul_A          146 -----------GQFTIMQLVGMLRGVGAGM-RYLSDLGYVHRDLAARNVLV  184 (325)
T ss_dssp             -----------TCSCHHHHHHHHHHHHHHH-HHHHHTTEECSCCSGGGEEE
T ss_pred             -----------cCCCHHHHHHHHHHHHHHH-HHHHHCCeeCCCCCcceEEE
Confidence                       1588999999999999999 9999854    445888765

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.39  E-value=1.7e-12  Score=105.53  Aligned_cols=90  Identities=13%  Similarity=0.104  Sum_probs=76.2

Q ss_pred             chHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          11 KETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        11 ~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      .+...+.+.+|+.+|++|+||||+++++.+.+ .+.+++||||+.++|.+++....                        
T Consensus        94 ~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~~lv~e~~~g~l~~~l~~~~------------------------  148 (348)
T 1u5q_A           94 SNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLR-EHTAWLVMEYCLGSASDLLEVHK------------------------  148 (348)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEEEEECCSEEHHHHHHHHT------------------------
T ss_pred             chHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE-CCeEEEEEecCCCCHHHHHHHhc------------------------
Confidence            34566788999999999999999999997764 67999999999999999987432                        


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                ..+++.+++.++.||++|| +|||+..    .+.|++|.+
T Consensus       149 ----------~~l~~~~~~~i~~qi~~aL-~~LH~~~ivH~Dlkp~NIll  187 (348)
T 1u5q_A          149 ----------KPLQEVEIAAVTHGALQGL-AYLHSHNMIHRDVKAGNILL  187 (348)
T ss_dssp             ----------SCCCHHHHHHHHHHHHHHH-HHHHHTTCBCCCCSGGGEEE
T ss_pred             ----------CCCCHHHHHHHHHHHHHHH-HHHHhCCeeeCCCCHHHEEE
Confidence                      1588999999999999999 9999864    445888765

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.38  E-value=2.4e-12  Score=98.14  Aligned_cols=92  Identities=20%  Similarity=0.152  Sum_probs=75.6

Q ss_pred             hHHHHHHHHHHHHhhhC-CCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVY-RHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPAN   89 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rL-rHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (138)
                      ......+.+|+..+.++ +||||+++++.+.+ .+.+++||||+. ++|.+++......                     
T Consensus        51 ~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~---------------------  108 (289)
T 1x8b_A           51 SVDEQNALREVYAHAVLGQHSHVVRYFSAWAE-DDHMLIQNEYCNGGSLADAISENYRI---------------------  108 (289)
T ss_dssp             SHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEE-TTEEEEEEECCTTCBHHHHHHHHHHH---------------------
T ss_pred             cHHHHHHHHHHHHHHHhCCCCCeeeeeeeeec-CCeEEEEEEecCCCcHHHHHHhhccc---------------------
Confidence            34456778999999999 99999999997764 679999999995 5999999854311                     


Q ss_pred             CCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          90 QSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        90 ~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                ...+++.+++.++.||++|| +|||+..    .+.|++|.+
T Consensus       109 ----------~~~~~~~~~~~i~~qi~~al-~~lH~~~ivH~Dikp~NIl~  148 (289)
T 1x8b_A          109 ----------MSYFKEAELKDLLLQVGRGL-RYIHSMSLVHMDIKPSNIFI  148 (289)
T ss_dssp             ----------TCCCCHHHHHHHHHHHHHHH-HHHHHTTEECSCCSGGGEEE
T ss_pred             ----------ccCCCHHHHHHHHHHHHHHH-HHHHhCCEeecCCCHHHEEE
Confidence                      12589999999999999999 9999864    555888876

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.38  E-value=9.1e-13  Score=115.21  Aligned_cols=86  Identities=17%  Similarity=-0.024  Sum_probs=71.1

Q ss_pred             chHHHHHHHHHHHHhhhC-CCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          11 KETVTEILRLGVKQLEVY-RHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPA   88 (138)
Q Consensus        11 ~e~~~e~lrrEi~~L~rL-rHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (138)
                      ++.-.+.+++|+.+|++| .||||+++++.+| +...+|+|||||. ++|.++|...+                      
T Consensus       281 ~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~e-d~~~~yLVMEyv~G~~L~d~i~~~~----------------------  337 (569)
T 4azs_A          281 SQRNKYELHNEIKFLTQPPAGFDAPAVLAHGE-NAQSGWLVMEKLPGRLLSDMLAAGE----------------------  337 (569)
T ss_dssp             HHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEE-CSSEEEEEEECCCSEEHHHHHHTTC----------------------
T ss_pred             hHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEE-ECCEEEEEEecCCCCcHHHHHHhCC----------------------
Confidence            455567899999999999 6999999999877 4679999999996 59999998432                      


Q ss_pred             CCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          89 NQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        89 ~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                   ++++.   .++.||++|| +|||+..    .+.|+||.+
T Consensus       338 -------------~l~~~---~I~~QIl~AL-~ylH~~GIIHRDIKPeNILL  372 (569)
T 4azs_A          338 -------------EIDRE---KILGSLLRSL-AALEKQGFWHDDVRPWNVMV  372 (569)
T ss_dssp             -------------CCCHH---HHHHHHHHHH-HHHHHTTCEESCCCGGGEEE
T ss_pred             -------------CCCHH---HHHHHHHHHH-HHHHHCCceeccCchHhEEE
Confidence                         45554   4689999999 9999866    557988865

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.38  E-value=8.4e-13  Score=105.16  Aligned_cols=93  Identities=16%  Similarity=0.140  Sum_probs=76.0

Q ss_pred             cchHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          10 RKETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPA   88 (138)
Q Consensus        10 ~~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (138)
                      ......+.+.+|+.+|++|+||||+++++.++ +.+.+++||||+. ++|.+++.....                     
T Consensus        73 ~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~---------------------  130 (309)
T 3p86_A           73 FHAERVNEFLREVAIMKRLRHPNIVLFMGAVT-QPPNLSIVTEYLSRGSLYRLLHKSGA---------------------  130 (309)
T ss_dssp             CSHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-STTCCEEEEECCTTCBHHHHHHSTTH---------------------
T ss_pred             CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-ECCceEEEEecCCCCcHHHHHhhcCC---------------------
Confidence            34556678899999999999999999999776 4678999999995 699999984321                     


Q ss_pred             CCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC------CcccCccee
Q psy3822          89 NQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS------TYLPSSVAF  136 (138)
Q Consensus        89 ~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a------~~~~~~~~~  136 (138)
                                 ...+++.++..++.||++|| +|||+..      .+.|++|.+
T Consensus       131 -----------~~~~~~~~~~~i~~qi~~aL-~~LH~~~~~ivH~Dikp~NIll  172 (309)
T 3p86_A          131 -----------REQLDERRRLSMAYDVAKGM-NYLHNRNPPIVHRNLKSPNLLV  172 (309)
T ss_dssp             -----------HHHSCHHHHHHHHHHHHHHH-HHHHTSSSCCCCTTCCGGGEEE
T ss_pred             -----------CCCCCHHHHHHHHHHHHHHH-HHHHcCCCCEECCCCChhhEEE
Confidence                       11488999999999999999 9999876      334887765

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=99.38  E-value=1.2e-12  Score=101.62  Aligned_cols=89  Identities=16%  Similarity=0.108  Sum_probs=74.2

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ...+.+.+|+.+|++|+||||+++++.+++ .+.+++||||+.++|.+++.....                         
T Consensus        44 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~~~L~~~~~~~~~-------------------------   97 (299)
T 2r3i_A           44 GVPSTAIREISLLKELNHPNIVKLLDVIHT-ENKLYLVFEFLHQDLKKFMDASAL-------------------------   97 (299)
T ss_dssp             -CCHHHHHHHHHHTTCCCTTBCCEEEEEEE-TTEEEEEEECCSEEHHHHHHHTTT-------------------------
T ss_pred             hhHHHHHHHHHHHHHcCCCCeeeEEEEEec-CCceEEEEEcccCCHHHHHHhhhc-------------------------
Confidence            344678899999999999999999997764 678999999999999999985431                         


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                              ..+++.+++.++.||++|| +|||+..    .+.|++|.+
T Consensus        98 --------~~~~~~~~~~~~~~i~~~l-~~lH~~~i~H~dlkp~Nili  136 (299)
T 2r3i_A           98 --------TGIPLPLIKSYLFQLLQGL-AFCHSHRVLHRDLKPQNLLI  136 (299)
T ss_dssp             --------TCCCHHHHHHHHHHHHHHH-HHHHHTTCCCCCCCGGGEEE
T ss_pred             --------cCCCHHHHHHHHHHHHHHH-HHHHHCCccCCCCCHHHeEE
Confidence                    1478889999999999999 9999864    445888765

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.38  E-value=2.6e-12  Score=100.44  Aligned_cols=94  Identities=13%  Similarity=0.163  Sum_probs=76.2

Q ss_pred             CCCCcchHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCC
Q psy3822           6 HKPKRKETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSS   84 (138)
Q Consensus         6 ~K~~~~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~   84 (138)
                      .+........+.+.+|+.+|++|+||||+++++.+++ .+.+++||||+. ++|.+++....                  
T Consensus        37 ~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~l~~~~~~~~------------------   97 (311)
T 4agu_A           37 LESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRR-KRRLHLVFEYCDHTVLHELDRYQR------------------   97 (311)
T ss_dssp             CCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEEEEECCSEEHHHHHHHTSS------------------
T ss_pred             eccccchHHHHHHHHHHHHHHhCCCCCccchhheeec-CCeEEEEEEeCCCchHHHHHhhhc------------------
Confidence            3334455667888999999999999999999998764 678999999996 57877776332                  


Q ss_pred             CCCCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          85 PPPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                       .+++.+++.++.||++|| +|||+..    .+.|++|.+
T Consensus        98 -----------------~~~~~~~~~i~~~l~~~l-~~lH~~~ivH~dlkp~Nil~  135 (311)
T 4agu_A           98 -----------------GVPEHLVKSITWQTLQAV-NFCHKHNCIHRDVKPENILI  135 (311)
T ss_dssp             -----------------CCCHHHHHHHHHHHHHHH-HHHHHTTEECCCCSGGGEEE
T ss_pred             -----------------CCCHHHHHHHHHHHHHHH-HHHHHCCCcCCCCChhhEEE
Confidence                             588899999999999999 9999754    455888765

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.38  E-value=1.2e-12  Score=104.29  Aligned_cols=126  Identities=11%  Similarity=0.052  Sum_probs=79.3

Q ss_pred             cchHHHHHHHHHHHHhhhC-CCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCC--------------
Q psy3822          10 RKETVTEILRLGVKQLEVY-RHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHS--------------   73 (138)
Q Consensus        10 ~~e~~~e~lrrEi~~L~rL-rHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~--------------   73 (138)
                      ......+.+.+|+.+|.+| +||||+++++.+.+..+.+++||||+. ++|.+++...........              
T Consensus        64 ~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  143 (359)
T 3vhe_A           64 ATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVG  143 (359)
T ss_dssp             CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC--------------
T ss_pred             CCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhccccccc
Confidence            3445567889999999999 799999999988765667999999995 699999986542100000              


Q ss_pred             -----------------CCCCCCCCCCCCCCCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccC
Q psy3822          74 -----------------TNPVTGGSGSSPPPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPS  132 (138)
Q Consensus        74 -----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~  132 (138)
                                       ....++.....+-........+.......+++.++..++.||++|| .|||+..    .+.|+
T Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL-~~LH~~~ivH~Dikp~  222 (359)
T 3vhe_A          144 AIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGM-EFLASRKCIHRDLAAR  222 (359)
T ss_dssp             ----------------------------------------CTTTTCBCHHHHHHHHHHHHHHH-HHHHHTTCCCSCCSGG
T ss_pred             ccchhhhccccccCccccccccccccccccchhhhcccccchhccccCHHHHHHHHHHHHHHH-HHHHHCCcccCCCChh
Confidence                             0000000000000111111122222233599999999999999999 9999864    44588


Q ss_pred             ccee
Q psy3822         133 SVAF  136 (138)
Q Consensus       133 ~~~~  136 (138)
                      +|.+
T Consensus       223 NIll  226 (359)
T 3vhe_A          223 NILL  226 (359)
T ss_dssp             GEEE
T ss_pred             hEEE
Confidence            8765

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.37  E-value=1.9e-12  Score=105.62  Aligned_cols=84  Identities=19%  Similarity=0.177  Sum_probs=72.5

Q ss_pred             HHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          16 EILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASR   94 (138)
Q Consensus        16 e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (138)
                      +.+++|+.+|++|+||||+++++.+. +.+.+++||||+. ++|.+++....                            
T Consensus        61 ~~~~~E~~~l~~l~hpniv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~----------------------------  111 (361)
T 3uc3_A           61 ENVQREIINHRSLRHPNIVRFKEVIL-TPTHLAIIMEYASGGELYERICNAG----------------------------  111 (361)
T ss_dssp             HHHHHHHHHHHHCCCTTBCCEEEEEE-CSSEEEEEEECCCSCBHHHHHHHHS----------------------------
T ss_pred             HHHHHHHHHHHhCCCCCCCcEEEEEe-eCCEEEEEEEeCCCCCHHHHHHhcC----------------------------
Confidence            56789999999999999999999776 5779999999995 69999997543                            


Q ss_pred             CcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          95 PTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        95 ~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                             .+++.+++.++.||+.|| .|||+..    .+.|++|.+
T Consensus       112 -------~~~~~~~~~i~~ql~~~L-~~LH~~~ivH~Dlkp~Nill  149 (361)
T 3uc3_A          112 -------RFSEDEARFFFQQLLSGV-SYCHSMQICHRDLKLENTLL  149 (361)
T ss_dssp             -------SCCHHHHHHHHHHHHHHH-HHHHHTTCCSCCCCGGGEEE
T ss_pred             -------CCCHHHHHHHHHHHHHHH-HHHHHCCcccCCCCHHHEEE
Confidence                   588999999999999999 9999754    445888765

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.37  E-value=1.5e-12  Score=102.81  Aligned_cols=89  Identities=16%  Similarity=0.132  Sum_probs=74.0

Q ss_pred             HHHHHHHHHHhhhCCCCCeeEEeceeeecC-CeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVYRHPKILSVLHPIEECP-DALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        15 ~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~-~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      .+.+.+|+.+|++|+||||+++++.+++.. ..+++||||+. ++|.+++.....                         
T Consensus        51 ~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-------------------------  105 (319)
T 4euu_A           51 VDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSN-------------------------  105 (319)
T ss_dssp             HHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEECCTTCBHHHHHHSGGG-------------------------
T ss_pred             HHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEeCCCCCCHHHHHHHhcc-------------------------
Confidence            567789999999999999999999776543 37999999995 799999985432                         


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                             ...+++.+++.++.||++|| +|||+..    .+.|++|.+
T Consensus       106 -------~~~~~~~~~~~i~~qi~~~L-~~LH~~~ivH~Dlkp~NIll  145 (319)
T 4euu_A          106 -------AYGLPESEFLIVLRDVVGGM-NHLRENGIVHRNIKPGNIMR  145 (319)
T ss_dssp             -------TTCCCHHHHHHHHHHHHHHH-HHHHHTTEECSCCSGGGEEE
T ss_pred             -------ccCCCHHHHHHHHHHHHHHH-HHHHHCCEecCCCCHHHEEE
Confidence                   12489999999999999999 9999864    556888865

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.37  E-value=1.7e-12  Score=106.43  Aligned_cols=90  Identities=17%  Similarity=0.184  Sum_probs=75.3

Q ss_pred             chHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          11 KETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPAN   89 (138)
Q Consensus        11 ~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (138)
                      .+...+.+.+|+.+|.+|+||||+++++.+.+ .+.+++||||+. ++|.+++....                       
T Consensus        86 ~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~~~lv~e~~~~~sL~~~l~~~~-----------------------  141 (373)
T 2qol_A           86 TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK-SKPVMIVTEYMENGSLDSFLRKHD-----------------------  141 (373)
T ss_dssp             CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSSCEEEEECCTTCBHHHHHHTTT-----------------------
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEee-CCceEEEEeCCCCCcHHHHHHhCC-----------------------
Confidence            45566788999999999999999999997764 678999999995 79999997432                       


Q ss_pred             CCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          90 QSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        90 ~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                 ..+++.++..++.||++|| +|||+..    .+.|++|.+
T Consensus       142 -----------~~~~~~~~~~i~~qi~~aL-~~LH~~~ivH~Dlkp~NIll  180 (373)
T 2qol_A          142 -----------AQFTVIQLVGMLRGIASGM-KYLSDMGYVHRDLAARNILI  180 (373)
T ss_dssp             -----------TCSCHHHHHHHHHHHHHHH-HHHHHTTCCCSCCCGGGEEE
T ss_pred             -----------CCCCHHHHHHHHHHHHHHH-HHHHHCCeeCCCCCcceEEE
Confidence                       1588899999999999999 9999754    445887765

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.37  E-value=2.9e-12  Score=98.71  Aligned_cols=89  Identities=13%  Similarity=0.147  Sum_probs=75.4

Q ss_pred             chHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          11 KETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPAN   89 (138)
Q Consensus        11 ~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (138)
                      .....+.+++|+.+|++|+||||+++++.++ +.+..++||||+. ++|.+.+....                       
T Consensus        45 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~~v~e~~~~~~l~~~~~~~~-----------------------  100 (284)
T 3kk8_A           45 SARDFQKLEREARICRKLQHPNIVRLHDSIQ-EESFHYLVFDLVTGGELFEDIVARE-----------------------  100 (284)
T ss_dssp             CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-CSSEEEEEECCCCSCBHHHHHHHHS-----------------------
T ss_pred             CHHHHHHHHHHHHHHHHcCCCCcCeEEEEEE-cCCEEEEEEecCCCCCHHHHHHhcC-----------------------
Confidence            3455688899999999999999999999776 4678999999995 69999887543                       


Q ss_pred             CCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          90 QSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        90 ~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                  .+++.+++.++.||+.|| .|||+..    .+.|++|.+
T Consensus       101 ------------~~~~~~~~~~~~~i~~~l-~~lH~~~i~H~dikp~Nil~  138 (284)
T 3kk8_A          101 ------------FYSEADASHCIQQILESI-AYCHSNGIVHRNLKPENLLL  138 (284)
T ss_dssp             ------------SCCHHHHHHHHHHHHHHH-HHHHHTTEECSCCCGGGEEE
T ss_pred             ------------CCCHHHHHHHHHHHHHHH-HHHHHCCcCcCCCCHHHEEE
Confidence                        588999999999999999 9999864    455888776

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.37  E-value=2.5e-12  Score=101.46  Aligned_cols=84  Identities=13%  Similarity=0.115  Sum_probs=72.5

Q ss_pred             HHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccc-cccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPV-YASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSAS   93 (138)
Q Consensus        15 ~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V-~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (138)
                      .+.+.+|+.+|++++||||+++++.+.+ .+.+++||||+ .++|.+++...                            
T Consensus        61 ~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~----------------------------  111 (297)
T 3fxz_A           61 KELIINEILVMRENKNPNIVNYLDSYLV-GDELWVVMEYLAGGSLTDVVTET----------------------------  111 (297)
T ss_dssp             HHHHHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEEEEECCTTCBHHHHHHHS----------------------------
T ss_pred             HHHHHHHHHHHhcCCCCCCCeEeEEEEE-CCEEEEEEECCCCCCHHHHHhhc----------------------------
Confidence            4678999999999999999999997774 67899999999 57999999742                            


Q ss_pred             CCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          94 RPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        94 ~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                              .+++.+++.++.||+.|| +|||+..    .+.|++|.+
T Consensus       112 --------~~~~~~~~~~~~qi~~~l-~~lH~~~i~H~Dlkp~Nil~  149 (297)
T 3fxz_A          112 --------CMDEGQIAAVCRECLQAL-EFLHSNQVIHRDIKSDNILL  149 (297)
T ss_dssp             --------CCCHHHHHHHHHHHHHHH-HHHHHTTEECCCCSGGGEEE
T ss_pred             --------CCCHHHHHHHHHHHHHHH-HHHHhCCceeCCCCHHHEEE
Confidence                    478899999999999999 9999864    455888765

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.37  E-value=1.4e-12  Score=101.27  Aligned_cols=89  Identities=15%  Similarity=0.034  Sum_probs=73.5

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecC-CeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECP-DALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~-~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      ...+.+++|+.+|++|+||||+++++.+.+.. +.+++||||+. ++|.+++....                        
T Consensus        65 ~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~------------------------  120 (302)
T 4e5w_A           65 NHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNK------------------------  120 (302)
T ss_dssp             CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEEEEEECCTTCBHHHHHHHHT------------------------
T ss_pred             hhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEEEEEEeCCCCcHHHHHHhcc------------------------
Confidence            34577899999999999999999999776532 57999999995 59999996543                        


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                ..+++.++..++.||+.|| +|||+..    .+.|++|.+
T Consensus       121 ----------~~~~~~~~~~~~~~i~~~l-~~lH~~~i~H~dikp~Nil~  159 (302)
T 4e5w_A          121 ----------NKINLKQQLKYAVQICKGM-DYLGSRQYVHRDLAARNVLV  159 (302)
T ss_dssp             ----------TTCCHHHHHHHHHHHHHHH-HHHHHTTEECSCCSGGGEEE
T ss_pred             ----------ccCCHHHHHHHHHHHHHHH-HHhhcCCcccCCCchheEEE
Confidence                      1588899999999999999 9999854    455888765

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.37  E-value=2.1e-12  Score=99.90  Aligned_cols=92  Identities=10%  Similarity=-0.005  Sum_probs=75.4

Q ss_pred             cchHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccc-cccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          10 RKETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPV-YASLASILAFQESPAPNHSTNPVTGGSGSSPPPA   88 (138)
Q Consensus        10 ~~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V-~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (138)
                      ......+.+.+|+.+|++|+||||+++++.+.+.....++||||+ .++|.+++....                      
T Consensus        61 ~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~----------------------  118 (298)
T 3pls_A           61 TEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQ----------------------  118 (298)
T ss_dssp             CSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEECCCTTCBHHHHHHCTT----------------------
T ss_pred             ccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEecccCCCHHHHHhccc----------------------
Confidence            344567888999999999999999999998775455569999998 579999997432                      


Q ss_pred             CCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          89 NQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        89 ~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                  ..+++.++..++.||++|| +|||+..    .+.|++|.+
T Consensus       119 ------------~~~~~~~~~~i~~qi~~~l-~~LH~~~i~H~dikp~Nili  157 (298)
T 3pls_A          119 ------------RNPTVKDLISFGLQVARGM-EYLAEQKFVHRDLAARNCML  157 (298)
T ss_dssp             ------------CCCBHHHHHHHHHHHHHHH-HHHHHTTCCCSCCSGGGEEE
T ss_pred             ------------cCCCHHHHHHHHHHHHHHH-HHHHhCCcccCCCCcceEEE
Confidence                        1578899999999999999 9999764    445888765

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.36  E-value=1.5e-12  Score=106.38  Aligned_cols=95  Identities=15%  Similarity=0.213  Sum_probs=77.4

Q ss_pred             cCCCCcchHHHHHHHHHHHHhhhCCCCCeeEEeceeeecC-----CeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCC
Q psy3822           5 LHKPKRKETVTEILRLGVKQLEVYRHPKILSVLHPIEECP-----DALAFATEPVYASLASILAFQESPAPNHSTNPVTG   79 (138)
Q Consensus         5 ~~K~~~~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~-----~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~   79 (138)
                      +.++...+...+.+.+|+.+|++|+||||+++++.+....     ..+|+||||+.++|.+++...              
T Consensus        58 ~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~--------------  123 (367)
T 1cm8_A           58 LYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHE--------------  123 (367)
T ss_dssp             CSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEEEEECCSEEHHHHHHHC--------------
T ss_pred             eCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCceEEEEEecCCCCHHHHHhcC--------------
Confidence            3344455666788999999999999999999999776432     357999999988999999742              


Q ss_pred             CCCCCCCCCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          80 GSGSSPPPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                            .+++.+++.++.||+.|| +|||+..    .+.|++|.+
T Consensus       124 ----------------------~l~~~~~~~~~~qi~~~L-~~LH~~~ivH~Dlkp~NIll  161 (367)
T 1cm8_A          124 ----------------------KLGEDRIQFLVYQMLKGL-RYIHAAGIIHRDLKPGNLAV  161 (367)
T ss_dssp             ----------------------CCCHHHHHHHHHHHHHHH-HHHHHTTEECCCCCGGGEEE
T ss_pred             ----------------------CCCHHHHHHHHHHHHHHH-HHHHHCCccccCcCHHHEEE
Confidence                                  488899999999999999 9999854    455888764

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.36  E-value=2.8e-12  Score=99.66  Aligned_cols=90  Identities=16%  Similarity=0.131  Sum_probs=74.9

Q ss_pred             cchHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          10 RKETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPA   88 (138)
Q Consensus        10 ~~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (138)
                      ......+.+.+|+.+|++|+||||+++++.++  .+.+++||||+. ++|.+++....                      
T Consensus        49 ~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~----------------------  104 (287)
T 1u59_A           49 TEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ--AEALMLVMEMAGGGPLHKFLVGKR----------------------  104 (287)
T ss_dssp             CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE--SSSEEEEEECCTTEEHHHHHTTCT----------------------
T ss_pred             cchhHHHHHHHHHHHHHhCCCCCEeEEEEEec--CCCcEEEEEeCCCCCHHHHHHhCC----------------------
Confidence            34566788999999999999999999999774  356999999996 59999997432                      


Q ss_pred             CCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          89 NQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        89 ~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                  ..+++.++..++.||++|| .|||+..    .+.|++|.+
T Consensus       105 ------------~~~~~~~~~~~~~qi~~~l-~~lH~~~i~H~dlkp~Nili  143 (287)
T 1u59_A          105 ------------EEIPVSNVAELLHQVSMGM-KYLEEKNFVHRDLAARNVLL  143 (287)
T ss_dssp             ------------TTSCHHHHHHHHHHHHHHH-HHHHHTTEECCCCSGGGEEE
T ss_pred             ------------ccCCHHHHHHHHHHHHHHH-HHHHHCCEeeCCCchheEEE
Confidence                        1588999999999999999 9999864    445888765

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.36  E-value=1.8e-12  Score=101.56  Aligned_cols=86  Identities=21%  Similarity=0.256  Sum_probs=73.1

Q ss_pred             HHHHHHHHHHHhhhC-CCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVY-RHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        14 ~~e~lrrEi~~L~rL-rHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      ..+.+.+|+.+|.++ +||||+++++.+++ .+.+++||||+. ++|.+++....                         
T Consensus        53 ~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~-------------------------  106 (316)
T 2ac3_A           53 IRSRVFREVEMLYQCQGHRNVLELIEFFEE-EDRFYLVFEKMRGGSILSHIHKRR-------------------------  106 (316)
T ss_dssp             CHHHHHHHHHHHHHTCCCTTBCCEEEEEEE-TTEEEEEEECCTTCBHHHHHHHHS-------------------------
T ss_pred             hHHHHHHHHHHHHHhcCCCCeeeEEEEEee-CCEEEEEEEcCCCCcHHHHHhccC-------------------------
Confidence            456789999999994 79999999997764 679999999996 79999998542                         


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                .+++.+++.++.||++|| +|||+..    .+.|++|.+
T Consensus       107 ----------~~~~~~~~~i~~qi~~~l-~~lH~~~ivH~dlkp~Nil~  144 (316)
T 2ac3_A          107 ----------HFNELEASVVVQDVASAL-DFLHNKGIAHRDLKPENILC  144 (316)
T ss_dssp             ----------SCCHHHHHHHHHHHHHHH-HHHHHTTCCCCCCCGGGEEE
T ss_pred             ----------CCCHHHHHHHHHHHHHHH-HHHHhCCceeCCCCHHHEEE
Confidence                      588999999999999999 9999864    445888765

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.36  E-value=2.9e-12  Score=98.63  Aligned_cols=85  Identities=14%  Similarity=0.208  Sum_probs=73.4

Q ss_pred             HHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSAS   93 (138)
Q Consensus        15 ~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (138)
                      .+.+++|+.+|++|+||||+++++.++ +.+.+++||||+. ++|.+.+....                           
T Consensus        50 ~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~---------------------------  101 (277)
T 3f3z_A           50 VDRFKQEIEIMKSLDHPNIIRLYETFE-DNTDIYLVMELCTGGELFERVVHKR---------------------------  101 (277)
T ss_dssp             HHHHHHHHHHHHTCCCTTBCCEEEEEE-CSSEEEEEEECCCSCBHHHHHHHHC---------------------------
T ss_pred             HHHHHHHHHHHHhCCCCCEeeEEEEEe-cCCeEEEEEeccCCCcHHHHHHHcC---------------------------
Confidence            467899999999999999999999776 4778999999995 69999987543                           


Q ss_pred             CCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          94 RPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        94 ~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                              .+++.+++.++.||++|| +|||+..    .+.|++|.+
T Consensus       102 --------~~~~~~~~~i~~~i~~~l-~~lH~~~i~H~dlkp~Nil~  139 (277)
T 3f3z_A          102 --------VFRESDAARIMKDVLSAV-AYCHKLNVAHRDLKPENFLF  139 (277)
T ss_dssp             --------SCCHHHHHHHHHHHHHHH-HHHHHTTEECCCCSGGGEEE
T ss_pred             --------CCCHHHHHHHHHHHHHHH-HHHHHCCccCCCCCHHHEEE
Confidence                    588999999999999999 9999754    455888876

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.36  E-value=3.4e-12  Score=98.29  Aligned_cols=86  Identities=22%  Similarity=0.247  Sum_probs=73.6

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ..+.+++|+.+|++|+||||+++++.++ +.+.+++||||+. ++|.+++....                          
T Consensus        51 ~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~--------------------------  103 (283)
T 3bhy_A           51 SREEIEREVNILREIRHPNIITLHDIFE-NKTDVVLILELVSGGELFDFLAEKE--------------------------  103 (283)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEEE-CSSEEEEEEECCCSCBHHHHHHHHS--------------------------
T ss_pred             HHHHHHHHHHHHHhCCCCCeeehhheec-CCCeEEEEEeecCCCcHHHHHHhcC--------------------------
Confidence            3577899999999999999999999776 4678999999995 79999997542                          


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                               .+++.++..++.||++|| .|||+..    .+.|++|.+
T Consensus       104 ---------~~~~~~~~~~~~~i~~~l-~~lH~~~i~H~dl~p~Nil~  141 (283)
T 3bhy_A          104 ---------SLTEDEATQFLKQILDGV-HYLHSKRIAHFDLKPENIML  141 (283)
T ss_dssp             ---------SCCHHHHHHHHHHHHHHH-HHHHHTTEECSCCSGGGEEE
T ss_pred             ---------CCCHHHHHHHHHHHHHHH-HHHHhCCccCCCCChHHEEE
Confidence                     588999999999999999 9999754    445888765

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.36  E-value=3.6e-12  Score=102.64  Aligned_cols=86  Identities=17%  Similarity=0.188  Sum_probs=73.7

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ..+.+++|+.+|++++||||+++++.++ +.+.+|+||||+. ++|.+++....                          
T Consensus        49 ~~~~~~~E~~~l~~l~hp~Iv~~~~~~~-~~~~~~lv~e~~~gg~L~~~l~~~~--------------------------  101 (318)
T 1fot_A           49 QVEHTNDERLMLSIVTHPFIIRMWGTFQ-DAQQIFMIMDYIEGGELFSLLRKSQ--------------------------  101 (318)
T ss_dssp             CHHHHHHHHHHHHSCCBTTBCCEEEEEE-CSSEEEEEECCCCSCBHHHHHHHTS--------------------------
T ss_pred             HHHHHHHHHHHHhhCCCCCCceEeEEEE-eCCEEEEEEeCCCCCCHHHHHHHcC--------------------------
Confidence            3567889999999999999999999776 4679999999996 69999998532                          


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                               .+++.+++.++.||+.|| +|||+..    .+.|++|.+
T Consensus       102 ---------~~~~~~~~~~~~qi~~aL-~~LH~~~ivHrDlkp~NIll  139 (318)
T 1fot_A          102 ---------RFPNPVAKFYAAEVCLAL-EYLHSKDIIYRDLKPENILL  139 (318)
T ss_dssp             ---------SCCHHHHHHHHHHHHHHH-HHHHTTTEECCCCCGGGEEE
T ss_pred             ---------CCCHHHHHHHHHHHHHHH-HHHHHCCccccCCChheEEE
Confidence                     588999999999999999 9999864    455888765

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.36  E-value=2.6e-12  Score=98.74  Aligned_cols=85  Identities=14%  Similarity=0.060  Sum_probs=71.8

Q ss_pred             HHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          16 EILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASR   94 (138)
Q Consensus        16 e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (138)
                      +.+++|+.+|++|+||||+++++.++ +.+.+++||||+. ++|.+++....                            
T Consensus        50 ~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~----------------------------  100 (269)
T 4hcu_A           50 EDFIEEAEVMMKLSHPKLVQLYGVCL-EQAPICLVFEFMEHGCLSDYLRTQR----------------------------  100 (269)
T ss_dssp             HHHHHHHHHHHTCCCTTBCCEEEEEC-SSSSEEEEEECCTTCBHHHHHHTTT----------------------------
T ss_pred             HHHHHHHHHHHhCCCCCEeeEEEEEe-cCCceEEEEEeCCCCcHHHHHHhcC----------------------------
Confidence            56899999999999999999999776 4678999999995 69999997432                            


Q ss_pred             CcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          95 PTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        95 ~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                            ..+++.++..++.||++|| +|||+..    .+.|++|.+
T Consensus       101 ------~~~~~~~~~~i~~~i~~~l-~~lH~~~i~H~dikp~Nil~  139 (269)
T 4hcu_A          101 ------GLFAAETLLGMCLDVCEGM-AYLEEACVIHRDLAARNCLV  139 (269)
T ss_dssp             ------TCCCHHHHHHHHHHHHHHH-HHHHHTTCCCSCCCGGGEEE
T ss_pred             ------cccCHHHHHHHHHHHHHHH-HHHHhCCeecCCcchheEEE
Confidence                  1588899999999999999 9999754    445888765

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.36  E-value=1.6e-12  Score=104.33  Aligned_cols=90  Identities=16%  Similarity=0.136  Sum_probs=76.2

Q ss_pred             cchHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          10 RKETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPA   88 (138)
Q Consensus        10 ~~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (138)
                      ......+.+.+|+.+|++|+||||+++++.+.+ .+.+++||||+. ++|.+++....                      
T Consensus        70 ~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~----------------------  126 (360)
T 3eqc_A           70 IKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS-DGEISICMEHMDGGSLDQVLKKAG----------------------  126 (360)
T ss_dssp             CCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEE-TTEEEEEECCCTTCBHHHHHHHHS----------------------
T ss_pred             cCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEE-CCEEEEEEECCCCCCHHHHHHHcC----------------------
Confidence            345667889999999999999999999997764 678999999996 59999998543                      


Q ss_pred             CCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCC-----CCcccCccee
Q psy3822          89 NQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVP-----STYLPSSVAF  136 (138)
Q Consensus        89 ~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~-----a~~~~~~~~~  136 (138)
                                   .+++.+++.++.||+.|| .|||+.     ..+.|++|.+
T Consensus       127 -------------~~~~~~~~~i~~~i~~~l-~~lh~~~~i~H~dlkp~Nil~  165 (360)
T 3eqc_A          127 -------------RIPEQILGKVSIAVIKGL-TYLREKHKIMHRDVKPSNILV  165 (360)
T ss_dssp             -------------SCCHHHHHHHHHHHHHHH-HHHHHHHCCCCSCCSGGGEEE
T ss_pred             -------------CCCHHHHHHHHHHHHHHH-HHHHHhCCEEcCCccHHHEEE
Confidence                         578899999999999999 999974     2445888765

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.35  E-value=2.8e-12  Score=99.66  Aligned_cols=88  Identities=14%  Similarity=0.150  Sum_probs=73.0

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeee-------------cCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEE-------------CPDALAFATEPVYASLASILAFQESPAPNHSTNPVT   78 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee-------------~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~   78 (138)
                      ....+.+.+|+.+|++|+||||+++++.+..             ..+.+++||||+.++|.+++...             
T Consensus        49 ~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~-------------  115 (320)
T 2i6l_A           49 PQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQG-------------  115 (320)
T ss_dssp             HHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----CCSCSEEEEEEECCSEEHHHHHTTC-------------
T ss_pred             hHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccccccccCceeEEeeccCCCHHHHhhcC-------------
Confidence            4456788999999999999999999986532             24689999999999999998631             


Q ss_pred             CCCCCCCCCCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          79 GGSGSSPPPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                             .+++.+++.++.||++|| +|||+..    .+.|++|.+
T Consensus       116 -----------------------~~~~~~~~~~~~qi~~~l-~~lH~~~i~H~dlkp~Nil~  153 (320)
T 2i6l_A          116 -----------------------PLLEEHARLFMYQLLRGL-KYIHSANVLHRDLKPANLFI  153 (320)
T ss_dssp             -----------------------CCCHHHHHHHHHHHHHHH-HHHHHTTCBCCCCSGGGEEE
T ss_pred             -----------------------CccHHHHHHHHHHHHHHH-HHHHhCCEecCCCCHHHEEE
Confidence                                   578899999999999999 9999754    445888765

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.35  E-value=2.4e-12  Score=99.12  Aligned_cols=87  Identities=17%  Similarity=0.147  Sum_probs=73.8

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ..+.+++|+.+|.+|+||||+++++.++ +.+.+++||||+. ++|.+++....                          
T Consensus        54 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~--------------------------  106 (278)
T 3cok_A           54 MVQRVQNEVKIHCQLKHPSILELYNYFE-DSNYVYLVLEMCHNGEMNRYLKNRV--------------------------  106 (278)
T ss_dssp             CHHHHHHHHHHHTTBCCTTBCCEEEEEE-CSSEEEEEEECCTTEEHHHHHHTCS--------------------------
T ss_pred             HHHHHHHHHHHHHhCCCCCeEeEEEEEc-cCCeEEEEEecCCCCcHHHHHhhcc--------------------------
Confidence            3578899999999999999999999776 4679999999995 69999998432                          


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                              ..+++.+++.++.||++|| +|||+..    .+-|++|.+
T Consensus       107 --------~~~~~~~~~~~~~qi~~~l-~~lH~~~i~H~dl~p~Nili  145 (278)
T 3cok_A          107 --------KPFSENEARHFMHQIITGM-LYLHSHGILHRDLTLSNLLL  145 (278)
T ss_dssp             --------SCCCHHHHHHHHHHHHHHH-HHHHHTTEECSSCCGGGEEE
T ss_pred             --------CCCCHHHHHHHHHHHHHHH-HHHHHCCeecCCCCHHHEEE
Confidence                    1588999999999999999 9999864    455888765

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.35  E-value=2.4e-12  Score=98.90  Aligned_cols=94  Identities=18%  Similarity=0.142  Sum_probs=76.3

Q ss_pred             chHHHHHHHHHHHHhhhCCCCCeeEEeceeee-cCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          11 KETVTEILRLGVKQLEVYRHPKILSVLHPIEE-CPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPA   88 (138)
Q Consensus        11 ~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee-~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (138)
                      .+...+.+.+|+..|++|+||||+++++.+.+ +.+.+++||||+. ++|.+++......                    
T Consensus        45 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~--------------------  104 (279)
T 2w5a_A           45 TEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKE--------------------  104 (279)
T ss_dssp             CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEEECCTTEEHHHHHHHHHHT--------------------
T ss_pred             CHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEEEeCCCCCCHHHHHHhhccc--------------------
Confidence            34567889999999999999999999997653 4568999999996 5999999854311                    


Q ss_pred             CCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC---------CcccCccee
Q psy3822          89 NQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS---------TYLPSSVAF  136 (138)
Q Consensus        89 ~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a---------~~~~~~~~~  136 (138)
                                 ...+++.++..++.||++|| +|||+..         .+-|++|.+
T Consensus       105 -----------~~~~~~~~~~~i~~~i~~~l-~~lH~~~~~~~~ivH~dl~p~NIl~  149 (279)
T 2w5a_A          105 -----------RQYLDEEFVLRVMTQLTLAL-KECHRRSDGGHTVLHRDLKPANVFL  149 (279)
T ss_dssp             -----------TCCCCHHHHHHHHHHHHHHH-HHHHHHC------CCCCCSGGGEEE
T ss_pred             -----------CCCCCHHHHHHHHHHHHHHH-HHHhcccCCCCeeEEeccchhhEEE
Confidence                       12589999999999999999 9999755         344888765

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.35  E-value=3.5e-12  Score=102.14  Aligned_cols=90  Identities=12%  Similarity=0.083  Sum_probs=75.1

Q ss_pred             chHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          11 KETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPAN   89 (138)
Q Consensus        11 ~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (138)
                      .+...+.+.+|+.+|++|+||||+++++.++ +.+.+++||||+. ++|.+++....                       
T Consensus        86 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~-----------------------  141 (333)
T 1mqb_A           86 TEKQRVDFLGEAGIMGQFSHHNIIRLEGVIS-KYKPMMIITEYMENGALDKFLREKD-----------------------  141 (333)
T ss_dssp             CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSSEEEEEECCTTEEHHHHHHHTT-----------------------
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEe-cCCCcEEEEeCCCCCcHHHHHHhCC-----------------------
Confidence            4455667899999999999999999999776 4678999999996 59999997532                       


Q ss_pred             CCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          90 QSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        90 ~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                 ..+++.++..++.||++|| +|||+..    .+.|++|.+
T Consensus       142 -----------~~~~~~~~~~i~~qi~~aL-~~LH~~~ivH~Dikp~NIl~  180 (333)
T 1mqb_A          142 -----------GEFSVLQLVGMLRGIAAGM-KYLANMNYVHRDLAARNILV  180 (333)
T ss_dssp             -----------TCSCHHHHHHHHHHHHHHH-HHHHHTTCCCSCCCGGGEEE
T ss_pred             -----------CCCCHHHHHHHHHHHHHHH-HHHHhCCeeCCCCChheEEE
Confidence                       1588899999999999999 9999864    445888765

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.35  E-value=1.7e-12  Score=100.95  Aligned_cols=90  Identities=14%  Similarity=0.090  Sum_probs=74.3

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeec-CCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEEC-PDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPAN   89 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~-~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (138)
                      +...+.+.+|+.+|++|+||||+++++.+.+. ...+++||||+. ++|.+++....                       
T Consensus        52 ~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-----------------------  108 (295)
T 3ugc_A           52 EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-----------------------  108 (295)
T ss_dssp             HHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCEEEEECCTTCBHHHHHHHCG-----------------------
T ss_pred             HHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceEEEEEeCCCCCHHHHHHhcc-----------------------
Confidence            45567889999999999999999999976532 357999999995 69999998542                       


Q ss_pred             CCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          90 QSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        90 ~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                 ..+++.++..++.||+.|| +|||+..    .+.|++|.+
T Consensus       109 -----------~~~~~~~~~~~~~qi~~~l-~~lH~~~ivH~Dikp~Nil~  147 (295)
T 3ugc_A          109 -----------ERIDHIKLLQYTSQICKGM-EYLGTKRYIHRDLATRNILV  147 (295)
T ss_dssp             -----------GGCCHHHHHHHHHHHHHHH-HHHHHTTCCCSCCSGGGEEE
T ss_pred             -----------cccCHHHHHHHHHHHHHHH-HHHhcCCcccCCCCHhhEEE
Confidence                       1588999999999999999 9999754    445888765

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.35  E-value=3.9e-12  Score=100.72  Aligned_cols=86  Identities=19%  Similarity=0.194  Sum_probs=73.5

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ..+.+++|+.+|++|+||||+++++.++ +.+.+++||||+. ++|.+++....                          
T Consensus        58 ~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~--------------------------  110 (321)
T 2a2a_A           58 SREEIEREVSILRQVLHHNVITLHDVYE-NRTDVVLILELVSGGELFDFLAQKE--------------------------  110 (321)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEEE-CSSEEEEEECCCCSCBHHHHHHTCS--------------------------
T ss_pred             hHHHHHHHHHHHHhCCCCCcceEEEEEe-cCCEEEEEEEcCCCCcHHHHHHhcC--------------------------
Confidence            3577899999999999999999999776 4679999999995 79999997432                          


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                               .+++.++..++.||++|| +|||+..    .+.|++|.+
T Consensus       111 ---------~~~~~~~~~i~~qi~~aL-~~lH~~~ivH~dikp~NIl~  148 (321)
T 2a2a_A          111 ---------SLSEEEATSFIKQILDGV-NYLHTKKIAHFDLKPENIML  148 (321)
T ss_dssp             ---------CEEHHHHHHHHHHHHHHH-HHHHHTTEECCCCSGGGEEE
T ss_pred             ---------CCCHHHHHHHHHHHHHHH-HHHHhCCeecCCCChHHEEE
Confidence                     589999999999999999 9999854    445888765

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.35  E-value=5e-12  Score=100.20  Aligned_cols=90  Identities=16%  Similarity=0.096  Sum_probs=75.4

Q ss_pred             cchHHHHHHHHHHHHhhhCCCCCeeEEeceeeec-CCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          10 RKETVTEILRLGVKQLEVYRHPKILSVLHPIEEC-PDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPP   87 (138)
Q Consensus        10 ~~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~-~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~   87 (138)
                      ......+.+++|+.+|++|+||||+++++.+++. .+.+++||||+. ++|.+++...                      
T Consensus        72 ~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~----------------------  129 (318)
T 3lxp_A           72 AGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRH----------------------  129 (318)
T ss_dssp             CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEEECCCTTCBHHHHGGGS----------------------
T ss_pred             cChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEEEecccCCcHHHHHhhC----------------------
Confidence            3345678899999999999999999999988764 368999999995 6999998632                      


Q ss_pred             CCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          88 ANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        88 ~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                    .+++.++..++.||+.|| .|||+..    .+.|++|.+
T Consensus       130 --------------~~~~~~~~~i~~~l~~~l-~~LH~~~ivH~Dikp~Nil~  167 (318)
T 3lxp_A          130 --------------SIGLAQLLLFAQQICEGM-AYLHAQHYIHRDLAARNVLL  167 (318)
T ss_dssp             --------------CCCHHHHHHHHHHHHHHH-HHHHHTTEECSCCSGGGEEE
T ss_pred             --------------CCCHHHHHHHHHHHHHHH-HHHHhCCccCCCCchheEEE
Confidence                          478899999999999999 9999864    445888765

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.35  E-value=2.3e-12  Score=109.14  Aligned_cols=88  Identities=17%  Similarity=0.176  Sum_probs=75.1

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      ...+.+.+|+.+|++|+||||+++++.++ +.+.+|+||||+. ++|.+.+....                         
T Consensus        88 ~~~~~~~~E~~~l~~l~hpniv~~~~~~~-~~~~~~lv~e~~~gg~L~~~l~~~~-------------------------  141 (504)
T 3q5i_A           88 KFHEEIYNEISLLKSLDHPNIIKLFDVFE-DKKYFYLVTEFYEGGELFEQIINRH-------------------------  141 (504)
T ss_dssp             CTHHHHHHHHHHHHTCCCTTBCCEEEEEE-CSSEEEEEEECCTTCBHHHHHHHHS-------------------------
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCeEEEEEE-cCCEEEEEEecCCCCcHHHHHHHcC-------------------------
Confidence            34578899999999999999999999776 5779999999995 69999997542                         


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcceee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAFC  137 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~~  137 (138)
                                .+++.+++.++.||+.|| .|||+..    .+.|++|.+.
T Consensus       142 ----------~~~~~~~~~i~~qi~~~l-~~lH~~~ivH~Dlkp~Nil~~  180 (504)
T 3q5i_A          142 ----------KFDECDAANIMKQILSGI-CYLHKHNIVHRDIKPENILLE  180 (504)
T ss_dssp             ----------CCCHHHHHHHHHHHHHHH-HHHHHTTEECSCCSGGGEEES
T ss_pred             ----------CCCHHHHHHHHHHHHHHH-HHHHHCCeEeCCCcHHHEEEe
Confidence                      589999999999999999 9999864    4458887763

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.34  E-value=4.7e-12  Score=100.29  Aligned_cols=96  Identities=9%  Similarity=0.025  Sum_probs=76.9

Q ss_pred             chHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccc-cccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          11 KETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPV-YASLASILAFQESPAPNHSTNPVTGGSGSSPPPAN   89 (138)
Q Consensus        11 ~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V-~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (138)
                      .+.....+.+|+.+|++|+||||+++++.+. ..+.+++||||+ .++|.+++.......                    
T Consensus        73 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~--------------------  131 (327)
T 2yfx_A           73 SEQDELDFLMEALIISKFNHQNIVRCIGVSL-QSLPRFILMELMAGGDLKSFLRETRPRP--------------------  131 (327)
T ss_dssp             CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSSCEEEEECCTTEEHHHHHHHTSCCS--------------------
T ss_pred             chhhHHHHHHHHHHHhhCCCCCCCeEEEEEc-CCCCcEEEEecCCCCcHHHHHHhhcccc--------------------
Confidence            3455567899999999999999999999776 466899999999 579999998654211                    


Q ss_pred             CCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          90 QSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        90 ~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                              .....+++.++..++.||++|| .|||+..    .+.|++|.+
T Consensus       132 --------~~~~~~~~~~~~~i~~qi~~al-~~LH~~~i~H~dlkp~NIli  173 (327)
T 2yfx_A          132 --------SQPSSLAMLDLLHVARDIACGC-QYLEENHFIHRDIAARNCLL  173 (327)
T ss_dssp             --------SSTTSCCHHHHHHHHHHHHHHH-HHHHHTTCCCSCCCGGGEEE
T ss_pred             --------cccccccHHHHHHHHHHHHHHH-HHHhhCCeecCcCCHhHEEE
Confidence                    0112589999999999999999 9999764    445888765

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.34  E-value=3.6e-12  Score=99.22  Aligned_cols=88  Identities=18%  Similarity=0.191  Sum_probs=73.7

Q ss_pred             chHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          11 KETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPAN   89 (138)
Q Consensus        11 ~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (138)
                      .+...+.+++|+.+|++|+||||+++++.++  .+.+++||||+. ++|.+++....                       
T Consensus        58 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~-----------------------  112 (291)
T 1xbb_A           58 DPALKDELLAEANVMQQLDNPYIVRMIGICE--AESWMLVMEMAELGPLNKYLQQNR-----------------------  112 (291)
T ss_dssp             -CHHHHHHHHHHHHHHTCCCTTBCCEEEEEE--SSSEEEEEECCTTEEHHHHHHHCT-----------------------
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEC--CCCcEEEEEeCCCCCHHHHHHhCc-----------------------
Confidence            3455788999999999999999999999773  467999999996 79999998532                       


Q ss_pred             CCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          90 QSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        90 ~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                  .+++.++..++.||++|| +|||+..    .+.|++|.+
T Consensus       113 ------------~~~~~~~~~i~~qi~~~l-~~LH~~~i~H~dikp~Nil~  150 (291)
T 1xbb_A          113 ------------HVKDKNIIELVHQVSMGM-KYLEESNFVHRDLAARNVLL  150 (291)
T ss_dssp             ------------TCCHHHHHHHHHHHHHHH-HHHHHTTEECSCCSGGGEEE
T ss_pred             ------------CCCHHHHHHHHHHHHHHH-HHHHhCCeEcCCCCcceEEE
Confidence                        488899999999999999 9999864    445888765

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.34  E-value=4.4e-12  Score=103.68  Aligned_cols=107  Identities=14%  Similarity=0.105  Sum_probs=78.5

Q ss_pred             CcchHHHHHHHHHHHHhhhC-CCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCC
Q psy3822           9 KRKETVTEILRLGVKQLEVY-RHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPP   86 (138)
Q Consensus         9 ~~~e~~~e~lrrEi~~L~rL-rHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~   86 (138)
                      ...+...+.+.+|+.+|++| +||||+++++.+. +.+.+|+||||+. ++|.++|........            ... 
T Consensus       124 ~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~-~~~~~~lv~e~~~~g~L~~~l~~~~~~~~------------~~~-  189 (370)
T 2psq_A          124 DATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT-QDGPLYVIVEYASKGNLREYLRARRPPGM------------EYS-  189 (370)
T ss_dssp             TCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEEC-SSSSCEEEEECCTTCBHHHHHHHTCCC------------------
T ss_pred             CcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEc-cCCCEEEEEEcCCCCCHHHHHHhhCCccc------------ccc-
Confidence            34556678899999999999 8999999999776 4678999999996 699999986542100            000 


Q ss_pred             CCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          87 PANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        87 ~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                            ....+..+..+++.++..++.||+.|| +|||+..    .+.|++|.+
T Consensus       190 ------~~~~~~~~~~~~~~~~~~i~~qi~~aL-~~LH~~~ivHrDlkp~NIll  236 (370)
T 2psq_A          190 ------YDINRVPEEQMTFKDLVSCTYQLARGM-EYLASQKCIHRDLAARNVLV  236 (370)
T ss_dssp             ------------CCCCCCHHHHHHHHHHHHHHH-HHHHHTTEECSCCCGGGEEE
T ss_pred             ------ccccccccccCCHHHHHHHHHHHHHHH-HHHHhCCeeccccchhhEEE
Confidence                  000011223588999999999999999 9999864    445888765

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.34  E-value=2.1e-12  Score=106.10  Aligned_cols=88  Identities=10%  Similarity=0.158  Sum_probs=74.2

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      ...+.+++|+.+|++|+||||+++++.++ +.+.+++||||+. ++|.+.+....                         
T Consensus       128 ~~~~~~~~E~~~l~~l~hpnIv~~~~~~~-~~~~~~lv~E~~~~~~L~~~l~~~~-------------------------  181 (373)
T 2x4f_A          128 KDKEEVKNEISVMNQLDHANLIQLYDAFE-SKNDIVLVMEYVDGGELFDRIIDES-------------------------  181 (373)
T ss_dssp             HHHHHHHHHHHHHTTCCCTTBCCEEEEEE-CSSEEEEEEECCTTCEEHHHHHHTG-------------------------
T ss_pred             ccHHHHHHHHHHHHhCCCCCCCeEEEEEE-ECCEEEEEEeCCCCCcHHHHHHhcC-------------------------
Confidence            34577899999999999999999999776 4678999999995 69999887432                         


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                               ..+++.++..++.||++|| +|||+..    .+.|++|.+
T Consensus       182 ---------~~l~~~~~~~i~~qi~~aL-~~LH~~~ivH~Dlkp~NIll  220 (373)
T 2x4f_A          182 ---------YNLTELDTILFMKQICEGI-RHMHQMYILHLDLKPENILC  220 (373)
T ss_dssp             ---------GGCCHHHHHHHHHHHHHHH-HHHHHTTEECCCCCGGGEEE
T ss_pred             ---------CCCCHHHHHHHHHHHHHHH-HHHHHCCcccccCCHHHEEE
Confidence                     2588999999999999999 9999854    455888765

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.34  E-value=3.7e-12  Score=99.04  Aligned_cols=89  Identities=12%  Similarity=0.139  Sum_probs=72.2

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceee-ecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIE-ECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~e-e~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ..+.+++|+.+|++|+||||+++++.+. +..+.+++||||+.++|.+++.....                         
T Consensus        49 ~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~-------------------------  103 (305)
T 2wtk_C           49 GEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPE-------------------------  103 (305)
T ss_dssp             HHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEEEEECCSEEHHHHHHHSTT-------------------------
T ss_pred             hHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEEEehhccCCHHHHHHhCcc-------------------------
Confidence            4577899999999999999999999764 23568999999998889888875431                         


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                              ..+++.++..++.||++|| +|||+..    .+.|++|.+
T Consensus       104 --------~~~~~~~~~~~~~qi~~al-~~LH~~~i~H~dlkp~NIl~  142 (305)
T 2wtk_C          104 --------KRFPVCQAHGYFCQLIDGL-EYLHSQGIVHKDIKPGNLLL  142 (305)
T ss_dssp             --------CSCCHHHHHHHHHHHHHHH-HHHHHTTEECSCCSGGGEEE
T ss_pred             --------cccCHHHHHHHHHHHHHHH-HHHHHCCeeecCCCcccEEE
Confidence                    2588999999999999999 9999864    445888765

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.34  E-value=2.8e-12  Score=102.49  Aligned_cols=89  Identities=13%  Similarity=0.107  Sum_probs=73.1

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeec-------CCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEEC-------PDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSP   85 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~-------~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~   85 (138)
                      .....+.+|+.+|++|+||||+++++.+.+.       .+.+++||||+.++|.+.+....                   
T Consensus        58 ~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~-------------------  118 (351)
T 3mi9_A           58 GFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL-------------------  118 (351)
T ss_dssp             SSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------CEEEEEEECCSEEHHHHHHCTT-------------------
T ss_pred             cchHHHHHHHHHHHhccCCCcccHhheeeccccccccCCceEEEEEeccCCCHHHHHhhcc-------------------
Confidence            3345668999999999999999999987653       34799999999999999887432                   


Q ss_pred             CCCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          86 PPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        86 ~~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                     ..+++.+++.++.||++|| +|||+..    .+.|++|.+
T Consensus       119 ---------------~~~~~~~~~~i~~qi~~~l-~~LH~~~ivH~Dlkp~NIl~  157 (351)
T 3mi9_A          119 ---------------VKFTLSEIKRVMQMLLNGL-YYIHRNKILHRDMKAANVLI  157 (351)
T ss_dssp             ---------------SCCCHHHHHHHHHHHHHHH-HHHHHTTEECCCCSGGGEEE
T ss_pred             ---------------CCCCHHHHHHHHHHHHHHH-HHHHHCCeeCCCCCHHHEEE
Confidence                           1588999999999999999 9999864    455888765

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.34  E-value=4e-12  Score=98.36  Aligned_cols=86  Identities=16%  Similarity=0.145  Sum_probs=73.4

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ..+.+++|+.+|++|+||||+++++.++ +.+.+++||||+. ++|.+++....                          
T Consensus        57 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~--------------------------  109 (284)
T 2vgo_A           57 VEHQLRREIEIQSHLRHPNILRMYNYFH-DRKRIYLMLEFAPRGELYKELQKHG--------------------------  109 (284)
T ss_dssp             CHHHHHHHHHHHHTCCCTTBCCEEEEEE-CSSEEEEEECCCTTEEHHHHHHHHS--------------------------
T ss_pred             HHHHHHHHHHHHhcCCCCCEeeEEEEEE-cCCEEEEEEEeCCCCcHHHHHHhcC--------------------------
Confidence            3467899999999999999999999776 4679999999995 69999998543                          


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                               .+++.++..++.||++|| .|||+..    .+-|++|.+
T Consensus       110 ---------~~~~~~~~~~~~qi~~~l-~~lH~~~i~H~dl~p~Nil~  147 (284)
T 2vgo_A          110 ---------RFDEQRSATFMEELADAL-HYCHERKVIHRDIKPENLLM  147 (284)
T ss_dssp             ---------SCCHHHHHHHHHHHHHHH-HHHHTTTEECCCCSGGGEEE
T ss_pred             ---------CCCHHHHHHHHHHHHHHH-HHHHHCCceecCCCHHHEEE
Confidence                     588899999999999999 9999864    445877765

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.34  E-value=2.8e-12  Score=100.00  Aligned_cols=107  Identities=12%  Similarity=0.050  Sum_probs=77.8

Q ss_pred             cchHHHHHHHHHHHHhhhC-CCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          10 RKETVTEILRLGVKQLEVY-RHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPP   87 (138)
Q Consensus        10 ~~e~~~e~lrrEi~~L~rL-rHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~   87 (138)
                      ......+.+.+|+.+|.+| +||||+++++.+.+....+++||||+. ++|.+++.........            ... 
T Consensus        69 ~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~------------~~~-  135 (316)
T 2xir_A           69 ATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP------------YKV-  135 (316)
T ss_dssp             CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEEC------------C---
T ss_pred             CCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCCceEEEEEcCCCCcHHHHHHhccccccc------------ccc-
Confidence            3445567889999999999 799999999987765567999999996 6999999864421000            000 


Q ss_pred             CCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          88 ANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        88 ~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                            .+.......+++.++..++.||++|| .|||+..    .+.|++|.+
T Consensus       136 ------~~~~~~~~~~~~~~~~~~~~qi~~al-~~lH~~~i~H~dikp~Nil~  181 (316)
T 2xir_A          136 ------APEDLYKDFLTLEHLICYSFQVAKGM-EFLASRKCIHRDLAARNILL  181 (316)
T ss_dssp             -----------CTTCEEHHHHHHHHHHHHHHH-HHHHHTTCCCSCCSGGGEEE
T ss_pred             ------cchhhhccccCHHHHHHHHHHHHHHH-HHHHhCCcccccCccceEEE
Confidence                  00011122489999999999999999 9999864    445888765

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.34  E-value=2e-12  Score=100.79  Aligned_cols=90  Identities=14%  Similarity=0.197  Sum_probs=74.4

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ..+.+++|+.+|++|+||||+++++.++ +.+.+++||||+. ++|.+.+.....                         
T Consensus        63 ~~~~~~~E~~~l~~l~hp~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~-------------------------  116 (285)
T 3is5_A           63 PMEQIEAEIEVLKSLDHPNIIKIFEVFE-DYHNMYIVMETCEGGELLERIVSAQA-------------------------  116 (285)
T ss_dssp             CHHHHHHHHHHHHTCCCTTBCCEEEEEE-CSSEEEEEECCCSCCBHHHHHHHHHH-------------------------
T ss_pred             hHHHHHHHHHHHHhCCCchHHhHHHhee-cCCeEEEEEEeCCCCcHHHHHHhhhh-------------------------
Confidence            3577899999999999999999999776 5778999999996 599999965321                         


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                            +...+++.+++.++.||++|| +|||+..    .+.|++|.+
T Consensus       117 ------~~~~~~~~~~~~i~~qi~~~L-~~LH~~~ivH~dikp~NIl~  157 (285)
T 3is5_A          117 ------RGKALSEGYVAELMKQMMNAL-AYFHSQHVVHKDLKPENILF  157 (285)
T ss_dssp             ------HTCCCCHHHHHHHHHHHHHHH-HHHHHTTCCCCCCSGGGEEE
T ss_pred             ------cccCCCHHHHHHHHHHHHHHH-HHHHhCCEEECCCCHHHEEE
Confidence                  112689999999999999999 9999754    445888775

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.34  E-value=2.6e-12  Score=102.84  Aligned_cols=86  Identities=16%  Similarity=0.163  Sum_probs=68.5

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ..+.+++|+.+|++|+||||+++++.++ +.+.+|+||||+. ++|.+++....                          
T Consensus        64 ~~~~~~~E~~~l~~l~hp~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~--------------------------  116 (327)
T 3a62_A           64 DTAHTKAERNILEEVKHPFIVDLIYAFQ-TGGKLYLILEYLSGGELFMQLEREG--------------------------  116 (327)
T ss_dssp             -------HHHHHHHCCCTTBCCEEEEEE-CSSCEEEEEECCTTEEHHHHHHHHS--------------------------
T ss_pred             HHHHHHHHHHHHHhCCCCCccceeEEEE-cCCEEEEEEeCCCCCcHHHHHHhCC--------------------------
Confidence            4567889999999999999999999776 4678999999995 79999997542                          


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                               .+++.+++.++.||+.|| +|||+..    .+.|++|.+
T Consensus       117 ---------~~~~~~~~~~~~qi~~al-~~lH~~~ivH~Dlkp~Nill  154 (327)
T 3a62_A          117 ---------IFMEDTACFYLAEISMAL-GHLHQKGIIYRDLKPENIML  154 (327)
T ss_dssp             ---------SCCHHHHHHHHHHHHHHH-HHHHHTTCCCCCCCTTTEEE
T ss_pred             ---------CCCHHHHHHHHHHHHHHH-HHHHhCCEEcccCCHHHeEE
Confidence                     578899999999999999 9999854    445888765

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.34  E-value=6e-12  Score=99.58  Aligned_cols=87  Identities=13%  Similarity=0.054  Sum_probs=72.1

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      +...+.+.+|+..|.+|+||||+++++.+++ .+.+|+||||+. ++|.+++..                          
T Consensus        72 ~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~-~~~~~lv~e~~~g~~L~~~l~~--------------------------  124 (286)
T 3uqc_A           72 DDVLQETLSRTLRLSRIDKPGVARVLDVVHT-RAGGLVVAEWIRGGSLQEVADT--------------------------  124 (286)
T ss_dssp             HHHHHHHHHHHHHHHTCCCTTBCCEEEEEEE-TTEEEEEEECCCEEEHHHHHTT--------------------------
T ss_pred             HHHHHHHHHHHHHHhcCCCCCcceeeEEEEE-CCcEEEEEEecCCCCHHHHHhc--------------------------
Confidence            4566888999999999999999999997764 678999999995 699999852                          


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcceee
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAFC  137 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~~  137 (138)
                                 ...+.++..++.||++|| +|||+..    .+.|++|.+.
T Consensus       125 -----------~~~~~~~~~i~~ql~~aL-~~lH~~givH~Dikp~NIll~  163 (286)
T 3uqc_A          125 -----------SPSPVGAIRAMQSLAAAA-DAAHRAGVALSIDHPSRVRVS  163 (286)
T ss_dssp             -----------CCCHHHHHHHHHHHHHHH-HHHHHTTCCCCCCSGGGEEEE
T ss_pred             -----------CCChHHHHHHHHHHHHHH-HHHHHCCCccCCCCcccEEEc
Confidence                       124457888999999999 9999864    4568888763

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.34  E-value=3.5e-12  Score=98.55  Aligned_cols=89  Identities=15%  Similarity=0.102  Sum_probs=73.8

Q ss_pred             chHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          11 KETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPAN   89 (138)
Q Consensus        11 ~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (138)
                      .....+.+++|+.+|++|+||||+++++.+++  +..++||||+. ++|.+++....                       
T Consensus        53 ~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~~~~v~e~~~~~~L~~~l~~~~-----------------------  107 (281)
T 3cc6_A           53 TLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE--EPTWIIMELYPYGELGHYLERNK-----------------------  107 (281)
T ss_dssp             CHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS--SSCEEEEECCTTCBHHHHHHHHT-----------------------
T ss_pred             CchHHHHHHHHHHHHHhCCCCCcceEEEEEcC--CCCEEEEecCCCCCHHHHHHhcc-----------------------
Confidence            34456888999999999999999999997653  45799999996 79999997543                       


Q ss_pred             CCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          90 QSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        90 ~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                 ..+++.++..++.||++|| +|||+..    .+.|++|.+
T Consensus       108 -----------~~~~~~~~~~~~~~i~~~l-~~lH~~~i~H~dlkp~Nil~  146 (281)
T 3cc6_A          108 -----------NSLKVLTLVLYSLQICKAM-AYLESINCVHRDIAVRNILV  146 (281)
T ss_dssp             -----------TTCCHHHHHHHHHHHHHHH-HHHHHTTCCCCCCSGGGEEE
T ss_pred             -----------ccCCHHHHHHHHHHHHHHH-HHHHHCCcccCCCccceEEE
Confidence                       1588899999999999999 9999754    445888765

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.34  E-value=5.5e-12  Score=100.84  Aligned_cols=88  Identities=14%  Similarity=0.099  Sum_probs=74.8

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      ....+.+.+|+.+|++|+||||+++++.++ +.+.+++||||+. ++|.+++....                        
T Consensus        82 ~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~------------------------  136 (335)
T 2owb_A           82 PHQREKMSMEISIHRSLAHQHVVGFHGFFE-DNDFVFVVLELCRRRSLLELHKRRK------------------------  136 (335)
T ss_dssp             HHHHHHHHHHHHHHHTCCCTTBCCEEEEEE-CSSEEEEEECCCTTCBHHHHHHHHC------------------------
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCCeEEEEEecCCCCCHHHHHhccC------------------------
Confidence            455678899999999999999999999776 4679999999996 69999987542                        


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                 .+++.++..++.||++|| +|||+..    .+.|++|.+
T Consensus       137 -----------~l~~~~~~~i~~qi~~aL-~~LH~~~ivH~dlkp~NIl~  174 (335)
T 2owb_A          137 -----------ALTEPEARYYLRQIVLGC-QYLHRNRVIHRDLKLGNLFL  174 (335)
T ss_dssp             -----------SCCHHHHHHHHHHHHHHH-HHHHHTTEECSCCCGGGEEE
T ss_pred             -----------CCCHHHHHHHHHHHHHHH-HHHHHCCCEecCCCchhEEE
Confidence                       588999999999999999 9999864    445777765

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.34  E-value=1.9e-12  Score=102.11  Aligned_cols=91  Identities=13%  Similarity=0.087  Sum_probs=75.0

Q ss_pred             chHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCC---eEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCC
Q psy3822          11 KETVTEILRLGVKQLEVYRHPKILSVLHPIEECPD---ALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPP   86 (138)
Q Consensus        11 ~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~---~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~   86 (138)
                      .+...+.+++|+.+|++|+||||+++++.++....   .+|+||||+. ++|.+++....                    
T Consensus        52 ~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~--------------------  111 (311)
T 3ork_A           52 DPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG--------------------  111 (311)
T ss_dssp             SHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEEEEEECCCEEEHHHHHHHHC--------------------
T ss_pred             CHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcccEEEEecCCCCCHHHHHHhcC--------------------
Confidence            34567889999999999999999999997765322   4699999995 79999997542                    


Q ss_pred             CCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcceee
Q psy3822          87 PANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAFC  137 (138)
Q Consensus        87 ~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~~  137 (138)
                                     .+++.++..++.||++|| +|||+..    .+.|++|.+.
T Consensus       112 ---------------~~~~~~~~~~~~qi~~~l-~~lH~~~ivH~dlkp~Nil~~  150 (311)
T 3ork_A          112 ---------------PMTPKRAIEVIADACQAL-NFSHQNGIIHRDVKPANIMIS  150 (311)
T ss_dssp             ---------------SCCHHHHHHHHHHHHHHH-HHHHHTTCCCCCCCGGGEEEE
T ss_pred             ---------------CCCHHHHHHHHHHHHHHH-HHHHHCCCCcCCCCHHHEEEc
Confidence                           588999999999999999 9999754    4458888763

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.34  E-value=2e-12  Score=106.46  Aligned_cols=91  Identities=10%  Similarity=0.003  Sum_probs=75.1

Q ss_pred             chHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          11 KETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPAN   89 (138)
Q Consensus        11 ~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (138)
                      .....+.+.+|+.+|++|+||||+++++...+..+..++||||+. ++|.+++....                       
T Consensus       130 ~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~-----------------------  186 (373)
T 3c1x_A          130 DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNET-----------------------  186 (373)
T ss_dssp             CSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEEECCTTCBHHHHHHCTT-----------------------
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEEECCCCCCHHHHHhhcc-----------------------
Confidence            345668889999999999999999999976555668999999996 69999997432                       


Q ss_pred             CCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          90 QSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        90 ~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                 ..+++.++..++.||++|| +|||+..    .+.|++|.+
T Consensus       187 -----------~~~~~~~~~~i~~qi~~aL-~~LH~~~ivHrDlkp~NIll  225 (373)
T 3c1x_A          187 -----------HNPTVKDLIGFGLQVAKGM-KFLASKKFVHRDLAARNCML  225 (373)
T ss_dssp             -----------CCCBHHHHHHHHHHHHHHH-HHHHHTTCCCSCCCGGGEEE
T ss_pred             -----------cCCCHHHHHHHHHHHHHHH-HHHHHCCEecCccchheEEE
Confidence                       1478889999999999999 9999864    445777764

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.33  E-value=4.7e-12  Score=101.37  Aligned_cols=90  Identities=17%  Similarity=0.193  Sum_probs=75.0

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeee----cCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEE----CPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPP   87 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee----~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~   87 (138)
                      ....+.+.+|+.+|++|+||||+++++.+..    ....+++||||+.++|.+.+....                     
T Consensus        70 ~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~---------------------  128 (362)
T 3pg1_A           70 SFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQR---------------------  128 (362)
T ss_dssp             HHHHHHHHHHHHHHHHCCCTTBCCCSEEEEECCTTTCCEEEEEEECCSEEHHHHHHCTT---------------------
T ss_pred             hhHHHHHHHHHHHHHhCCCcCccceeeeEEeccCCCcceEEEEEccCCCCHHHHHHhcc---------------------
Confidence            4456889999999999999999999997753    234799999999999999997432                     


Q ss_pred             CCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          88 ANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        88 ~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                   ..+++.+++.++.||+.|| .|||+..    .+.|++|.+
T Consensus       129 -------------~~~~~~~~~~~~~qi~~~l-~~lH~~~ivH~Dlkp~NIl~  167 (362)
T 3pg1_A          129 -------------IVISPQHIQYFMYHILLGL-HVLHEAGVVHRDLHPGNILL  167 (362)
T ss_dssp             -------------SCCCHHHHHHHHHHHHHHH-HHHHHTTCCCCCCCGGGEEE
T ss_pred             -------------cCCCHHHHHHHHHHHHHHH-HHHHHCcCEecCCChHHEEE
Confidence                         2588999999999999999 9999864    445888876

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.33  E-value=4.4e-12  Score=103.24  Aligned_cols=85  Identities=18%  Similarity=0.167  Sum_probs=73.1

Q ss_pred             HHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSAS   93 (138)
Q Consensus        15 ~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (138)
                      .+.+.+|+.+|++++||||+++++.++ +.+.+|+||||+. ++|.+++....                           
T Consensus        49 ~~~~~~E~~~l~~l~hp~iv~l~~~~~-~~~~~~lv~E~~~gg~L~~~l~~~~---------------------------  100 (337)
T 1o6l_A           49 VAHTVTESRVLQNTRHPFLTALKYAFQ-THDRLCFVMEYANGGELFFHLSRER---------------------------  100 (337)
T ss_dssp             HHHHHHHHHHHHSCCCTTBCCEEEEEE-CSSEEEEEEECCTTCBHHHHHHHHS---------------------------
T ss_pred             HHHHHHHHHHHHhCCCCcCcceEEEEE-eCCEEEEEEeCCCCCcHHHHHHhcC---------------------------
Confidence            467889999999999999999999776 5779999999995 69999997542                           


Q ss_pred             CCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          94 RPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        94 ~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                              .+++.+++.++.||+.|| +|||+..    .+.|++|.+
T Consensus       101 --------~~~~~~~~~~~~qi~~aL-~~LH~~~ivHrDlkp~NIll  138 (337)
T 1o6l_A          101 --------VFTEERARFYGAEIVSAL-EYLHSRDVVYRDIKLENLML  138 (337)
T ss_dssp             --------CCCHHHHHHHHHHHHHHH-HHHHHTTCBCCCCCGGGEEE
T ss_pred             --------CCCHHHHHHHHHHHHHHH-HHHHHCCeecCcCCHHHEEE
Confidence                    588999999999999999 9999854    445888765

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.33  E-value=1.4e-12  Score=106.48  Aligned_cols=90  Identities=12%  Similarity=0.136  Sum_probs=74.7

Q ss_pred             chHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          11 KETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPAN   89 (138)
Q Consensus        11 ~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (138)
                      .....+.+.+|+.+|++|+||||+++++.+. ..+.+++||||+. ++|.+++....                       
T Consensus       152 ~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~-~~~~~~lv~e~~~~g~L~~~l~~~~-----------------------  207 (377)
T 3cbl_A          152 PPDLKAKFLQEARILKQYSHPNIVRLIGVCT-QKQPIYIVMELVQGGDFLTFLRTEG-----------------------  207 (377)
T ss_dssp             CHHHHTTTTHHHHHHTTCCCTTBCCEEEEEC-SSSSCEEEEECCTTCBHHHHHHHHG-----------------------
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe-cCCCcEEEEEcCCCCCHHHHHHhcC-----------------------
Confidence            3455667899999999999999999999775 4678999999995 79999998543                       


Q ss_pred             CCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          90 QSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        90 ~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                 ..+++.++..++.||++|| +|||+..    .+.|++|.+
T Consensus       208 -----------~~~~~~~~~~~~~qi~~~l-~~LH~~~ivHrDlkp~Nil~  246 (377)
T 3cbl_A          208 -----------ARLRVKTLLQMVGDAAAGM-EYLESKCCIHRDLAARNCLV  246 (377)
T ss_dssp             -----------GGCCHHHHHHHHHHHHHHH-HHHHHTTEECSCCSGGGEEE
T ss_pred             -----------CCCCHHHHHHHHHHHHHHH-HHHHHCCcCCcccCHHHEEE
Confidence                       1588899999999999999 9999864    445777765

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.33  E-value=9.1e-13  Score=105.56  Aligned_cols=87  Identities=9%  Similarity=0.025  Sum_probs=70.8

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      ...+.+++|+.+|++|+||||+++++.++ +.+.+++||||+. ++|.+++...                          
T Consensus        47 ~~~~~~~~E~~~l~~l~hpnIv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~--------------------------   99 (323)
T 3tki_A           47 DCPENIKKEICINKMLNHENVVKFYGHRR-EGNIQYLFLEYCSGGELFDRIEPD--------------------------   99 (323)
T ss_dssp             ----CHHHHHHHHHHCCCTTBCCEEEEEE-CSSEEEEEEECCTTEEGGGGSBTT--------------------------
T ss_pred             chHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCCeEEEEEEcCCCCcHHHHHhhc--------------------------
Confidence            34467899999999999999999999776 4779999999995 5998887532                          


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                               ..+++.+++.++.||++|| +|||+..    .+.|++|.+
T Consensus       100 ---------~~~~~~~~~~i~~qi~~aL-~~LH~~givH~Dlkp~NIll  138 (323)
T 3tki_A          100 ---------IGMPEPDAQRFFHQLMAGV-VYLHGIGITHRDIKPENLLL  138 (323)
T ss_dssp             ---------TBCCHHHHHHHHHHHHHHH-HHHHHTTEECSCCSGGGEEE
T ss_pred             ---------CCCCHHHHHHHHHHHHHHH-HHHHHCCccccccchHHEEE
Confidence                     1589999999999999999 9999754    455888765

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.33  E-value=3.5e-12  Score=97.72  Aligned_cols=85  Identities=11%  Similarity=0.041  Sum_probs=72.4

Q ss_pred             HHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          16 EILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASR   94 (138)
Q Consensus        16 e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (138)
                      +.+.+|+..|.+|+||||+++++.++ +.+.+++||||+. ++|.+++....                            
T Consensus        48 ~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~----------------------------   98 (268)
T 3sxs_A           48 DEFFQEAQTMMKLSHPKLVKFYGVCS-KEYPIYIVTEYISNGCLLNYLRSHG----------------------------   98 (268)
T ss_dssp             HHHHHHHHHHHHCCCTTBCCEEEEEC-SSSSEEEEEECCTTCBHHHHHHHHG----------------------------
T ss_pred             HHHHHHHHHHHhCCCCCEeeEEEEEc-cCCceEEEEEccCCCcHHHHHHHcC----------------------------
Confidence            56899999999999999999999775 4678999999995 79999997543                            


Q ss_pred             CcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          95 PTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        95 ~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                            ..+++.++..++.||++|| .|||+..    .+.|++|.+
T Consensus        99 ------~~~~~~~~~~i~~qi~~~l-~~lH~~~i~H~dikp~Nil~  137 (268)
T 3sxs_A           99 ------KGLEPSQLLEMCYDVCEGM-AFLESHQFIHRDLAARNCLV  137 (268)
T ss_dssp             ------GGCCHHHHHHHHHHHHHHH-HHHHHTTEEESSCSGGGEEE
T ss_pred             ------CCCCHHHHHHHHHHHHHHH-HHHHHCCeecCCcCcceEEE
Confidence                  1588999999999999999 9999864    445888765

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.33  E-value=4.4e-12  Score=97.31  Aligned_cols=86  Identities=20%  Similarity=0.310  Sum_probs=73.2

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ..+.+++|+..|++++||||+++++.+. +.+.+++||||+. ++|.+++....                          
T Consensus        54 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~--------------------------  106 (276)
T 2h6d_A           54 VVGKIKREIQNLKLFRHPHIIKLYQVIS-TPTDFFMVMEYVSGGELFDYICKHG--------------------------  106 (276)
T ss_dssp             CHHHHHHHHHHHHTCCCTTBCCEEEEEE-CSSEEEEEEECCCSCBHHHHHHHHC--------------------------
T ss_pred             HHHHHHHHHHHHhcCCCCCEeEEEEEEe-cCCeEEEEEeccCCCcHHHHHhccC--------------------------
Confidence            3567899999999999999999999776 4679999999995 69999997542                          


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                               .+++.+++.++.||++|| .|||+..    .+-|++|.+
T Consensus       107 ---------~~~~~~~~~~~~qi~~~l-~~lH~~~i~H~dl~p~Nil~  144 (276)
T 2h6d_A          107 ---------RVEEMEARRLFQQILSAV-DYCHRHMVVHRDLKPENVLL  144 (276)
T ss_dssp             ---------SCCHHHHHHHHHHHHHHH-HHHHHHCSSCCCCCGGGEEE
T ss_pred             ---------CCCHHHHHHHHHHHHHHH-HHHHHCCCccCCCChhhEEE
Confidence                     578899999999999999 9999743    445887765

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.33  E-value=3.8e-12  Score=99.06  Aligned_cols=107  Identities=17%  Similarity=0.098  Sum_probs=76.6

Q ss_pred             chHHHHHHHHHHHHhhhC-CCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          11 KETVTEILRLGVKQLEVY-RHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPA   88 (138)
Q Consensus        11 ~e~~~e~lrrEi~~L~rL-rHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (138)
                      .....+.+.+|+.+|.+| +||||+++++.++ +.+.+++||||+. ++|.+++........       ...  ..+   
T Consensus        66 ~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~-------~~~--~~~---  132 (313)
T 1t46_A           66 HLTEREALMSELKVLSYLGNHMNIVNLLGACT-IGGPTLVITEYCCYGDLLNFLRRKRDSFI-------CSK--TSP---  132 (313)
T ss_dssp             CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSSCEEEEECCTTEEHHHHHHHTTTTC-------------------
T ss_pred             hHHHHHHHHHHHHHHhhcccCCCeeeEEEEEe-cCCCcEEEEecCCCCCHHHHHHhcccccc-------ccc--ccc---
Confidence            344568899999999999 9999999999776 4678999999995 699999986542100       000  000   


Q ss_pred             CCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          89 NQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        89 ~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                           .........+++.++..++.||++|| .|||+..    .+.|++|.+
T Consensus       133 -----~~~~~~~~~~~~~~~~~~~~qi~~~l-~~lH~~~i~H~dlkp~Nil~  178 (313)
T 1t46_A          133 -----AIMEDDELALDLEDLLSFSYQVAKGM-AFLASKNCIHRDLAARNILL  178 (313)
T ss_dssp             ------------CCCCHHHHHHHHHHHHHHH-HHHHHTTCCCSCCSGGGEEE
T ss_pred             -----cccccccccCCHHHHHHHHHHHHHHH-HHHHHCCeecCCCccceEEE
Confidence                 00011123689999999999999999 9999854    445888765

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.33  E-value=6.6e-12  Score=97.59  Aligned_cols=88  Identities=14%  Similarity=0.099  Sum_probs=74.5

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      ....+.+.+|+.+|++|+||||+++++.++ +.+.+++||||+. ++|.+++....                        
T Consensus        56 ~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~------------------------  110 (294)
T 2rku_A           56 PHQREKMSMEISIHRSLAHQHVVGFHGFFE-DNDFVFVVLELCRRRSLLELHKRRK------------------------  110 (294)
T ss_dssp             HHHHHHHHHHHHHHHTCCCTTBCCEEEEEE-CSSEEEEEEECCTTCBHHHHHHHHC------------------------
T ss_pred             HHHHHHHHHHHHHHHhCCCCCEeeeeeeec-cCCEEEEEEecCCCCCHHHHHHhcC------------------------
Confidence            345678899999999999999999999776 4778999999996 79999987542                        


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                 .+++.++..++.||++|| +|||+..    .+.|++|.+
T Consensus       111 -----------~~~~~~~~~i~~qi~~~l-~~lH~~~i~H~dl~p~Nil~  148 (294)
T 2rku_A          111 -----------ALTEPEARYYLRQIVLGC-QYLHRNRVIHRDLKLGNLFL  148 (294)
T ss_dssp             -----------SCCHHHHHHHHHHHHHHH-HHHHHTTEECCCCCGGGEEE
T ss_pred             -----------CCCHHHHHHHHHHHHHHH-HHHHHCCccccCCChHhEEE
Confidence                       588899999999999999 9999864    445777764

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.33  E-value=5.7e-12  Score=97.32  Aligned_cols=90  Identities=17%  Similarity=0.125  Sum_probs=72.9

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccc-cccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPV-YASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V-~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      ...+.+++|+.+|++|+||||+++++.+.+ .+.+++||||+ .++|.+++.....                        
T Consensus        61 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~------------------------  115 (295)
T 2clq_A           61 RYSQPLHEEIALHKHLKHKNIVQYLGSFSE-NGFIKIFMEQVPGGSLSALLRSKWG------------------------  115 (295)
T ss_dssp             ---HHHHHHHHHHHTCCCTTBCCEEEEEEE-TTEEEEEEECCSEEEHHHHHHHTTC------------------------
T ss_pred             HHHHHHHHHHHHHHhCCCCCEeeEeeEEEe-CCcEEEEEEeCCCCCHHHHHHhhcc------------------------
Confidence            455788999999999999999999997764 67899999999 4799999985431                        


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                              ...+++..++.++.||+.|| +|||+..    .+.|++|.+
T Consensus       116 --------~~~~~~~~~~~~~~qi~~~l-~~lH~~~i~H~dl~p~Nil~  155 (295)
T 2clq_A          116 --------PLKDNEQTIGFYTKQILEGL-KYLHDNQIVHRDIKGDNVLI  155 (295)
T ss_dssp             --------CCTTCHHHHHHHHHHHHHHH-HHHHHTTEECCCCSGGGEEE
T ss_pred             --------CCCccHHHHHHHHHHHHHHH-HHHHhCCEEccCCChhhEEE
Confidence                    12567889999999999999 9999854    445777765

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.33  E-value=2.5e-12  Score=108.69  Aligned_cols=85  Identities=20%  Similarity=0.215  Sum_probs=73.0

Q ss_pred             HHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSAS   93 (138)
Q Consensus        15 ~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (138)
                      .+.+.+|+.+|++|+||||+++++.++ +.+.+|+||||+. ++|.+.+....                           
T Consensus        80 ~~~~~~E~~~l~~l~hpniv~~~~~~~-~~~~~~lv~e~~~~g~L~~~~~~~~---------------------------  131 (494)
T 3lij_A           80 NSKLLEEVAVLKLLDHPNIMKLYDFFE-DKRNYYLVMECYKGGELFDEIIHRM---------------------------  131 (494)
T ss_dssp             THHHHHHHHHHTTCCCTTBCCEEEEEE-CSSEEEEEEECCCSCBHHHHHHHHS---------------------------
T ss_pred             HHHHHHHHHHHHhCCCCCCCeEEEEEE-eCCEEEEEEecCCCCcHHHHHHHcC---------------------------
Confidence            467899999999999999999999776 5779999999995 69999887542                           


Q ss_pred             CCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          94 RPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        94 ~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                              .+++.+++.++.||+.|| .|||+..    .+.|++|.+
T Consensus       132 --------~~~~~~~~~i~~qi~~~l-~~lH~~~ivH~Dlkp~Nil~  169 (494)
T 3lij_A          132 --------KFNEVDAAVIIKQVLSGV-TYLHKHNIVHRDLKPENLLL  169 (494)
T ss_dssp             --------SCCHHHHHHHHHHHHHHH-HHHHHTTEECSCCSGGGEEE
T ss_pred             --------CCCHHHHHHHHHHHHHHH-HHHHHCCceeccCChhhEEE
Confidence                    588999999999999999 9999754    445888765

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.33  E-value=6.4e-12  Score=99.21  Aligned_cols=88  Identities=13%  Similarity=0.073  Sum_probs=75.2

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      +...+.+++|+..|.+|+||||+++++.+++ .+.+++||||+. ++|.+++....                        
T Consensus        75 ~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~------------------------  129 (309)
T 2h34_A           75 PVFRTRMQREARTAGRLQEPHVVPIHDFGEI-DGQLYVDMRLINGVDLAAMLRRQG------------------------  129 (309)
T ss_dssp             HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEE-TTEEEEEEECCCCEEHHHHHHHHC------------------------
T ss_pred             HHHHHHHHHHHHHHhhcCCCCeeEEEEEEee-CCeEEEEEEecCCCCHHHHHHhcC------------------------
Confidence            4556889999999999999999999997764 679999999996 59999998542                        


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                 .+++.++..++.||++|| .|||+..    .+-|++|.+
T Consensus       130 -----------~~~~~~~~~i~~qi~~~l-~~lH~~~i~H~dlkp~NIl~  167 (309)
T 2h34_A          130 -----------PLAPPRAVAIVRQIGSAL-DAAHAAGATHRDVKPENILV  167 (309)
T ss_dssp             -----------SCCHHHHHHHHHHHHHHH-HHHHHTTCCCSCCCGGGEEE
T ss_pred             -----------CCCHHHHHHHHHHHHHHH-HHHHHCcCCcCCCChHHEEE
Confidence                       588899999999999999 9999854    445888765

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.33  E-value=2.7e-12  Score=98.25  Aligned_cols=86  Identities=16%  Similarity=0.155  Sum_probs=70.9

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      ...+.+++|+.+|++++||||+++++.++ +.+.+++||||+. ++|.+++...                          
T Consensus        48 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~--------------------------  100 (271)
T 3dtc_A           48 QTIENVRQEAKLFAMLKHPNIIALRGVCL-KEPNLCLVMEFARGGPLNRVLSGK--------------------------  100 (271)
T ss_dssp             -CHHHHHHHHHHHHHCCCTTBCCEEEEEC-CC--CEEEEECCTTEEHHHHHTSS--------------------------
T ss_pred             HHHHHHHHHHHHHHhcCCCCEeeEEEEEe-cCCceEEEEEcCCCCCHHHHhhcC--------------------------
Confidence            34578899999999999999999999776 4678999999995 7999998521                          


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC-------CcccCccee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS-------TYLPSSVAF  136 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a-------~~~~~~~~~  136 (138)
                                .+++.++..++.||++|| .|||+..       .+.|++|.+
T Consensus       101 ----------~~~~~~~~~i~~~l~~~l-~~lH~~~~~~i~H~dikp~Nil~  141 (271)
T 3dtc_A          101 ----------RIPPDILVNWAVQIARGM-NYLHDEAIVPIIHRDLKSSNILI  141 (271)
T ss_dssp             ----------CCCHHHHHHHHHHHHHHH-HHHHHSSSSCCCCSCCSGGGEEE
T ss_pred             ----------CCCHHHHHHHHHHHHHHH-HHHHhCCCCceeecCCchHHEEE
Confidence                      588899999999999999 9999854       445888876

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.33  E-value=5.7e-12  Score=102.66  Aligned_cols=95  Identities=14%  Similarity=0.150  Sum_probs=76.7

Q ss_pred             cCCCCcchHHHHHHHHHHHHhhhCC-CCCeeEEeceeeec-CCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCC
Q psy3822           5 LHKPKRKETVTEILRLGVKQLEVYR-HPKILSVLHPIEEC-PDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSG   82 (138)
Q Consensus         5 ~~K~~~~e~~~e~lrrEi~~L~rLr-HPnIL~l~e~~ee~-~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~   82 (138)
                      +.+........+.+.+|+.+|.+++ ||||+++++.+... ...+|+||||+.++|.+++...                 
T Consensus        42 i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~-----------------  104 (388)
T 3oz6_A           42 IFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYMETDLHAVIRAN-----------------  104 (388)
T ss_dssp             ECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEEEEECCSEEHHHHHHHT-----------------
T ss_pred             ecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEEEecccCcCHHHHHHcC-----------------
Confidence            3343344566678889999999998 99999999987643 3479999999999999999742                 


Q ss_pred             CCCCCCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          83 SSPPPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                         .+++.+++.++.||+.|| +|||+..    .+.|++|.+
T Consensus       105 -------------------~~~~~~~~~i~~qi~~~L-~~LH~~~ivHrDlkp~NIll  142 (388)
T 3oz6_A          105 -------------------ILEPVHKQYVVYQLIKVI-KYLHSGGLLHRDMKPSNILL  142 (388)
T ss_dssp             -------------------CCCHHHHHHHHHHHHHHH-HHHHHTTEECCCCCGGGEEE
T ss_pred             -------------------CCCHHHHHHHHHHHHHHH-HHHHhCCEEeCCCCHHHeEE
Confidence                               588899999999999999 9999754    556888765

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.33  E-value=3.8e-12  Score=109.09  Aligned_cols=86  Identities=21%  Similarity=0.291  Sum_probs=73.8

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccc-cccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPV-YASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V-~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ..+.+++|+.+|++|+||||+++++.++ +.+.+|+||||+ .++|.+++....                          
T Consensus        59 ~~~~~~~Ei~~l~~l~HpnIv~l~~~~~-~~~~~~lv~E~~~gg~L~~~l~~~~--------------------------  111 (476)
T 2y94_A           59 VVGKIRREIQNLKLFRHPHIIKLYQVIS-TPSDIFMVMEYVSGGELFDYICKNG--------------------------  111 (476)
T ss_dssp             THHHHHHHHHHHTTCCCTTBCCEEEEEE-CSSEEEEEEECCSSEEHHHHTTSSS--------------------------
T ss_pred             HHHHHHHHHHHHHhCCCCCCCcEEEEEE-ECCEEEEEEeCCCCCcHHHHHHhcC--------------------------
Confidence            4578899999999999999999999776 577999999999 579999987322                          


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                               .+++.+++.++.||+.|| +|||+..    .+.|++|.+
T Consensus       112 ---------~l~~~~~~~i~~qi~~aL-~~LH~~givHrDLkp~NIll  149 (476)
T 2y94_A          112 ---------RLDEKESRRLFQQILSGV-DYCHRHMVVHRDLKPENVLL  149 (476)
T ss_dssp             ---------SCCHHHHHHHHHHHHHHH-HHHHTTTEECSCCSGGGEEE
T ss_pred             ---------CCCHHHHHHHHHHHHHHH-HHHHHCCCCcccccHHHEEE
Confidence                     589999999999999999 9999864    455888765

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.33  E-value=6.9e-12  Score=102.02  Aligned_cols=88  Identities=15%  Similarity=0.162  Sum_probs=75.0

Q ss_pred             hHHHHHHHHHHHHhhhC-CCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVY-RHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPAN   89 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rL-rHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (138)
                      +...+.+++|+.+|.++ +||||+++++.++ +.+.+|+||||+. ++|.+++....                       
T Consensus        50 ~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~-~~~~~~lv~e~~~gg~L~~~l~~~~-----------------------  105 (345)
T 3a8x_A           50 DEDIDWVQTEKHVFEQASNHPFLVGLHSCFQ-TESRLFFVIEYVNGGDLMFHMQRQR-----------------------  105 (345)
T ss_dssp             HHHHHHHHHHHHHHHHTTTCTTBCCEEEEEE-CSSEEEEEECCCCSCBHHHHHHHHS-----------------------
T ss_pred             hHHHHHHHHHHHHHHhcCCCCccCeEEEEEE-eCCEEEEEEeCCCCCcHHHHHHHcC-----------------------
Confidence            45668889999999998 8999999999776 5779999999995 69999997542                       


Q ss_pred             CCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          90 QSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        90 ~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                  .+++.+++.++.||+.|| +|||+..    .+.|++|.+
T Consensus       106 ------------~l~~~~~~~~~~qi~~aL-~~LH~~~ivHrDlkp~NIll  143 (345)
T 3a8x_A          106 ------------KLPEEHARFYSAEISLAL-NYLHERGIIYRDLKLDNVLL  143 (345)
T ss_dssp             ------------SCCHHHHHHHHHHHHHHH-HHHHHTTCBCCCCCGGGEEE
T ss_pred             ------------CCCHHHHHHHHHHHHHHH-HHHHHCCceecCCCHHHEEE
Confidence                        589999999999999999 9999854    445888765

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.33  E-value=5.1e-12  Score=98.55  Aligned_cols=92  Identities=11%  Similarity=0.039  Sum_probs=75.8

Q ss_pred             chHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccc-cccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          11 KETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPV-YASLASILAFQESPAPNHSTNPVTGGSGSSPPPAN   89 (138)
Q Consensus        11 ~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V-~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (138)
                      .+...+.+++|+.+|++|+||||+++++.+. +.+.+++||||+ .++|.+++.....                      
T Consensus        70 ~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~----------------------  126 (307)
T 2nru_A           70 TEELKQQFDQEIKVMAKCQHENLVELLGFSS-DGDDLCLVYVYMPNGSLLDRLSCLDG----------------------  126 (307)
T ss_dssp             TTTHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSSCEEEEECCTTCBHHHHHHTGGG----------------------
T ss_pred             hHHHHHHHHHHHHHHHhcCCCCeEEEEEEEe-cCCceEEEEEecCCCcHHHHHHhccC----------------------
Confidence            3456788999999999999999999999765 467899999999 4799999975431                      


Q ss_pred             CCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          90 QSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        90 ~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                ...+++.++..++.||++|| .|||+..    .+.|++|.+
T Consensus       127 ----------~~~~~~~~~~~i~~~i~~~l-~~lH~~~i~H~dlkp~Nili  166 (307)
T 2nru_A          127 ----------TPPLSWHMRCKIAQGAANGI-NFLHENHHIHRDIKSANILL  166 (307)
T ss_dssp             ----------CCCCCHHHHHHHHHHHHHHH-HHHHHTTEECSCCCGGGEEE
T ss_pred             ----------CCCCCHHHHHHHHHHHHHHH-HHHhcCCeecCCCCHHHEEE
Confidence                      12588999999999999999 9999754    445887765

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.33  E-value=5.9e-12  Score=100.88  Aligned_cols=86  Identities=15%  Similarity=0.201  Sum_probs=73.4

Q ss_pred             HHHHHHHHHHHhhhCC-CCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYR-HPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLr-HPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      ..+.+.+|+..|++++ ||||+++++.++ +.+.+|+||||+. ++|.+++....                         
T Consensus        48 ~~~~~~~e~~~l~~l~~h~niv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~-------------------------  101 (325)
T 3kn6_A           48 MEANTQKEITALKLCEGHPNIVKLHEVFH-DQLHTFLVMELLNGGELFERIKKKK-------------------------  101 (325)
T ss_dssp             GHHHHHHHHHHHHHTTTCTTBCCEEEEEE-CSSEEEEEECCCCSCBHHHHHHHCS-------------------------
T ss_pred             hhhhHHHHHHHHHHhcCCCCeeEEEEEEE-cCCEEEEEEEccCCCcHHHHHHhcC-------------------------
Confidence            3466789999999998 999999999776 5778999999995 69999998532                         


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                .+++.+++.++.||+.|| +|||+..    .+.|++|.+
T Consensus       102 ----------~~~~~~~~~i~~qi~~~l-~~LH~~~ivH~Dlkp~NIll  139 (325)
T 3kn6_A          102 ----------HFSETEASYIMRKLVSAV-SHMHDVGVVHRDLKPENLLF  139 (325)
T ss_dssp             ----------CCCHHHHHHHHHHHHHHH-HHHHHTTEECCCCCGGGEEE
T ss_pred             ----------CCCHHHHHHHHHHHHHHH-HHHHHCCCeecCCCHHHEEE
Confidence                      589999999999999999 9999754    455888876

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.33  E-value=3.8e-12  Score=105.72  Aligned_cols=86  Identities=14%  Similarity=0.182  Sum_probs=73.1

Q ss_pred             HHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSAS   93 (138)
Q Consensus        15 ~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (138)
                      .+.+++|+.+|++|+||||+++++.++ +.+.+++||||+. ++|.+++....                           
T Consensus        92 ~~~~~~E~~il~~l~hpnIv~~~~~~~-~~~~~~lv~E~~~gg~L~~~l~~~~---------------------------  143 (387)
T 1kob_A           92 KYTVKNEISIMNQLHHPKLINLHDAFE-DKYEMVLILEFLSGGELFDRIAAED---------------------------  143 (387)
T ss_dssp             HHHHHHHHHHHTTCCSTTBCCEEEEEE-CSSEEEEEEECCCCCBHHHHTTCTT---------------------------
T ss_pred             HHHHHHHHHHHHhCCCcCCCeEEEEEE-eCCEEEEEEEcCCCCcHHHHHHhhc---------------------------
Confidence            457899999999999999999999776 4679999999995 69999886322                           


Q ss_pred             CCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          94 RPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        94 ~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                             ..+++.++..++.||++|| +|||+..    .+.|++|.+
T Consensus       144 -------~~l~~~~~~~i~~qi~~aL-~~LH~~givHrDlkp~NIll  182 (387)
T 1kob_A          144 -------YKMSEAEVINYMRQACEGL-KHMHEHSIVHLDIKPENIMC  182 (387)
T ss_dssp             -------CCBCHHHHHHHHHHHHHHH-HHHHHTTEECCCCCGGGEEE
T ss_pred             -------CCCCHHHHHHHHHHHHHHH-HHHHhCCeeecccchHHeEE
Confidence                   2589999999999999999 9999754    555888765

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.32  E-value=2e-12  Score=99.04  Aligned_cols=87  Identities=10%  Similarity=0.051  Sum_probs=72.6

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      ...+.+++|+.+|++|+||||+++++.+++ .+.+++||||+. ++|.+++...                          
T Consensus        47 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~--------------------------   99 (276)
T 2yex_A           47 DCPENIKKEICINKMLNHENVVKFYGHRRE-GNIQYLFLEYCSGGELFDRIEPD--------------------------   99 (276)
T ss_dssp             THHHHHHHHHHHHHTCCCTTBCCEEEEEEE-TTEEEEEEECCTTEEGGGGSBTT--------------------------
T ss_pred             hhhHHHHHHHHHHHhcCCCCceeeeeEEEc-CCEEEEEEEecCCCcHHHHHhhc--------------------------
Confidence            456788999999999999999999997764 678999999996 5998877532                          


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                               ..+++.++..++.||++|| +|||+..    .+-|++|.+
T Consensus       100 ---------~~~~~~~~~~~~~~i~~~l-~~lH~~~i~H~dl~p~Nil~  138 (276)
T 2yex_A          100 ---------IGMPEPDAQRFFHQLMAGV-VYLHGIGITHRDIKPENLLL  138 (276)
T ss_dssp             ---------TBCCHHHHHHHHHHHHHHH-HHHHHTTEECSCCSGGGEEE
T ss_pred             ---------cCCCHHHHHHHHHHHHHHH-HHHHhCCeeccCCChHHEEE
Confidence                     1588999999999999999 9999754    445777765

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.32  E-value=5.4e-12  Score=105.76  Aligned_cols=86  Identities=20%  Similarity=0.208  Sum_probs=74.0

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ..+.+.+|+.+|++|+||||+++++.++ +.+.+++||||+. ++|.+.+....                          
T Consensus        69 ~~~~~~~E~~~l~~l~hpniv~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~--------------------------  121 (484)
T 3nyv_A           69 DKESLLREVQLLKQLDHPNIMKLYEFFE-DKGYFYLVGEVYTGGELFDEIISRK--------------------------  121 (484)
T ss_dssp             CHHHHHHHHHHHTTCCCTTBCCEEEEEE-CSSEEEEEECCCCSCBHHHHHHTCS--------------------------
T ss_pred             HHHHHHHHHHHHHhCCCCCCCcEEEEEE-eCCEEEEEEecCCCCCHHHHHHhcC--------------------------
Confidence            4577899999999999999999999776 4779999999995 69999997432                          


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                               .+++.+++.++.||+.|| .|||+..    .+.|++|.+
T Consensus       122 ---------~~~~~~~~~i~~qi~~~l-~~lH~~~ivH~Dlkp~Nil~  159 (484)
T 3nyv_A          122 ---------RFSEVDAARIIRQVLSGI-TYMHKNKIVHRDLKPENLLL  159 (484)
T ss_dssp             ---------CCBHHHHHHHHHHHHHHH-HHHHHTTCCCSCCCGGGEEE
T ss_pred             ---------CCCHHHHHHHHHHHHHHH-HHHHHCCeeeCCCCHHHEEE
Confidence                     589999999999999999 9999864    445888876

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.32  E-value=5.5e-12  Score=102.99  Aligned_cols=85  Identities=16%  Similarity=0.128  Sum_probs=73.4

Q ss_pred             HHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSAS   93 (138)
Q Consensus        15 ~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (138)
                      .+.+.+|+.+|++++||||+++++.++ +.+.+|+||||+. ++|.+++....                           
T Consensus        85 ~~~~~~E~~~l~~l~hp~iv~~~~~~~-~~~~~~lv~e~~~gg~L~~~l~~~~---------------------------  136 (350)
T 1rdq_E           85 IEHTLNEKRILQAVNFPFLVKLEFSFK-DNSNLYMVMEYVAGGEMFSHLRRIG---------------------------  136 (350)
T ss_dssp             HHHHHHHHHHHTTCCCTTBCCEEEEEE-CSSEEEEEEECCTTCBHHHHHHHHC---------------------------
T ss_pred             HHHHHHHHHHHHhCCCCCCCeEEEEEE-cCCEEEEEEcCCCCCcHHHHHHHcC---------------------------
Confidence            467889999999999999999999776 4679999999995 79999998543                           


Q ss_pred             CCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          94 RPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        94 ~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                              .+++.+++.++.||+.|| +|||+..    .+.|++|.+
T Consensus       137 --------~~~~~~~~~~~~qi~~aL-~~LH~~~ivHrDlkp~NIll  174 (350)
T 1rdq_E          137 --------RFSEPHARFYAAQIVLTF-EYLHSLDLIYRDLKPENLLI  174 (350)
T ss_dssp             --------CCCHHHHHHHHHHHHHHH-HHHHHTTEECCCCSGGGEEE
T ss_pred             --------CCCHHHHHHHHHHHHHHH-HHHHHCCcccccCccceEEE
Confidence                    588999999999999999 9999754    455888765

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.32  E-value=6.8e-12  Score=102.30  Aligned_cols=96  Identities=9%  Similarity=0.029  Sum_probs=76.5

Q ss_pred             chHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          11 KETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPAN   89 (138)
Q Consensus        11 ~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (138)
                      .+.....+.+|+.+|++|+||||+++++.+. +.+.+++||||+. ++|.+++.......                    
T Consensus       114 ~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~-~~~~~~lv~e~~~~g~L~~~l~~~~~~~--------------------  172 (367)
T 3l9p_A          114 SEQDELDFLMEALIISKFNHQNIVRCIGVSL-QSLPRFILLELMAGGDLKSFLRETRPRP--------------------  172 (367)
T ss_dssp             CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSSCEEEEECCTTEEHHHHHHHHSCCS--------------------
T ss_pred             ChhhHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCCCCEEEEEeCCCCCHHHHHHhhcccc--------------------
Confidence            3444566789999999999999999999776 4668999999995 69999998654211                    


Q ss_pred             CCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          90 QSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        90 ~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                              .....+++.++..++.||++|| +|||+..    .+.|++|.+
T Consensus       173 --------~~~~~~~~~~~~~i~~qi~~aL-~~LH~~~ivHrDlkp~NIll  214 (367)
T 3l9p_A          173 --------SQPSSLAMLDLLHVARDIACGC-QYLEENHFIHRDIAARNCLL  214 (367)
T ss_dssp             --------SSCCCCCHHHHHHHHHHHHHHH-HHHHHTTCCCSCCCGGGEEE
T ss_pred             --------CccccccHHHHHHHHHHHHHHH-HHHHhCCeeCCCCChhhEEE
Confidence                    0112589999999999999999 9999864    445888765

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.32  E-value=5.8e-12  Score=106.02  Aligned_cols=85  Identities=19%  Similarity=0.231  Sum_probs=73.5

Q ss_pred             HHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSAS   93 (138)
Q Consensus        15 ~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (138)
                      .+.+.+|+.+|++|+||||+++++.++ +.+.+|+||||+. ++|.+.+....                           
T Consensus        65 ~~~~~~E~~~l~~l~hpniv~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~---------------------------  116 (486)
T 3mwu_A           65 TSTILREVELLKKLDHPNIMKLFEILE-DSSSFYIVGELYTGGELFDEIIKRK---------------------------  116 (486)
T ss_dssp             HHHHHHHHHHHHHCCCTTBCCEEEEEE-CSSEEEEEECCCCSCBHHHHHHHHS---------------------------
T ss_pred             HHHHHHHHHHHHhCCCCCcCeEEEEEE-cCCEEEEEEEcCCCCcHHHHHHhcC---------------------------
Confidence            467899999999999999999999776 5779999999995 69999987543                           


Q ss_pred             CCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          94 RPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        94 ~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                              .+++.+++.++.||+.|| .|||+..    .+.|++|.+
T Consensus       117 --------~~~~~~~~~i~~qi~~al-~~lH~~~ivH~Dlkp~Nil~  154 (486)
T 3mwu_A          117 --------RFSEHDAARIIKQVFSGI-TYMHKHNIVHRDLKPENILL  154 (486)
T ss_dssp             --------SCCHHHHHHHHHHHHHHH-HHHHHTTCCCSCCSGGGEEE
T ss_pred             --------CCCHHHHHHHHHHHHHHH-HHHHHCCeEeccCchHHEEE
Confidence                    588999999999999999 9999754    445888876

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.32  E-value=7.6e-12  Score=96.57  Aligned_cols=86  Identities=16%  Similarity=0.157  Sum_probs=73.3

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ..+.+++|+.+|++|+||||+++++.++ +.+.+++||||+. ++|.+.+....                          
T Consensus        52 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~l~~~l~~~~--------------------------  104 (279)
T 3fdn_A           52 VEHQLRREVEIQSHLRHPNILRLYGYFH-DATRVYLILEYAPLGTVYRELQKLS--------------------------  104 (279)
T ss_dssp             CHHHHHHHHHHHTTCCCTTBCCEEEEEE-CSSEEEEEECCCTTEEHHHHHHHHS--------------------------
T ss_pred             HHHHHHHHHHHHHcCCCCCCcchhheEe-cCCEEEEEEecCCCCcHHHHHHhcC--------------------------
Confidence            3567899999999999999999999776 4678999999996 69999997543                          


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                               .+++.++..++.||++|| .|||+..    .+-|++|.+
T Consensus       105 ---------~~~~~~~~~~~~qi~~~l-~~LH~~~i~H~dlkp~Nili  142 (279)
T 3fdn_A          105 ---------KFDEQRTATYITELANAL-SYCHSKRVIHRDIKPENLLL  142 (279)
T ss_dssp             ---------SCCHHHHHHHHHHHHHHH-HHHHTTTCEECCCCGGGEEE
T ss_pred             ---------CCCHHHHHHHHHHHHHHH-HHHHhCCEecccCChHhEEE
Confidence                     588899999999999999 9999864    345888765

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.32  E-value=4.8e-12  Score=102.27  Aligned_cols=90  Identities=19%  Similarity=0.224  Sum_probs=75.0

Q ss_pred             cchHHHHHHHHHHHHhhhCCCCCeeEEeceeeecC----CeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCC
Q psy3822          10 RKETVTEILRLGVKQLEVYRHPKILSVLHPIEECP----DALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSP   85 (138)
Q Consensus        10 ~~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~----~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~   85 (138)
                      ..+...+.+.+|+.+|.+|+||||+++++.+....    ..+++|||++.++|.+++...                    
T Consensus        64 ~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~iv~e~~~~~L~~~l~~~--------------------  123 (364)
T 3qyz_A           64 EHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ--------------------  123 (364)
T ss_dssp             TCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEEEECCSEEHHHHHHHC--------------------
T ss_pred             cCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEEEEcccCcCHHHHHHhC--------------------
Confidence            34556688899999999999999999999775322    479999999999999999742                    


Q ss_pred             CCCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          86 PPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        86 ~~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                      .+++.+++.++.||+.|| +|||+..    .+.|++|.+
T Consensus       124 ----------------~~~~~~~~~i~~qi~~aL-~~LH~~~ivH~Dikp~NIl~  161 (364)
T 3qyz_A          124 ----------------HLSNDHICYFLYQILRGL-KYIHSANVLHRDLKPSNLLL  161 (364)
T ss_dssp             ----------------CCCHHHHHHHHHHHHHHH-HHHHHTTEECCCCCGGGEEE
T ss_pred             ----------------CCCHHHHHHHHHHHHHHH-HHHHHCCeecCCCChHhEEE
Confidence                            488899999999999999 9999864    445888765

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.32  E-value=6.3e-12  Score=99.85  Aligned_cols=90  Identities=17%  Similarity=0.169  Sum_probs=74.3

Q ss_pred             cchHHHHHHHHHHHHhhhCCCCCeeEEeceeeec----CCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCC
Q psy3822          10 RKETVTEILRLGVKQLEVYRHPKILSVLHPIEEC----PDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSP   85 (138)
Q Consensus        10 ~~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~----~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~   85 (138)
                      ........+.+|+.+|++|+||||+++++.....    .+.+++||||+.++|.+++...                    
T Consensus        48 ~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~--------------------  107 (353)
T 2b9h_A           48 DKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQ--------------------  107 (353)
T ss_dssp             SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEEEEECCCSEEHHHHHHHC--------------------
T ss_pred             ccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEEEEEeccCccHHHHHhhc--------------------
Confidence            3455667788999999999999999999865432    2679999999999999998742                    


Q ss_pred             CCCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          86 PPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        86 ~~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                      .+++.+++.++.||++|| +|||+..    .+.|++|.+
T Consensus       108 ----------------~~~~~~~~~~~~qi~~~L-~~LH~~~ivH~Dlkp~Nil~  145 (353)
T 2b9h_A          108 ----------------MLSDDHIQYFIYQTLRAV-KVLHGSNVIHRDLKPSNLLI  145 (353)
T ss_dssp             ----------------CCCHHHHHHHHHHHHHHH-HHHHHTTEECSCCCGGGEEE
T ss_pred             ----------------CCCHHHHHHHHHHHHHHH-HHHHHCCeecCCCCHHHeEE
Confidence                            488899999999999999 9999854    445888765

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.32  E-value=8.7e-12  Score=99.12  Aligned_cols=91  Identities=14%  Similarity=0.131  Sum_probs=74.2

Q ss_pred             CcchHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccccc-cHHHHHhhcCCCCCCCCCCCCCCCCCCCCCC
Q psy3822           9 KRKETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYA-SLASILAFQESPAPNHSTNPVTGGSGSSPPP   87 (138)
Q Consensus         9 ~~~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~~-sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~   87 (138)
                      .......+.+.+|+.+|++|+||||+++++.+++ .+.+++||||+.+ +|.+++....                     
T Consensus        62 ~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~~~~~~l~~~~~~~~---------------------  119 (331)
T 4aaa_A           62 DDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKK-KKRWYLVFEFVDHTILDDLELFPN---------------------  119 (331)
T ss_dssp             SSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEEEEECCSEEHHHHHHHSTT---------------------
T ss_pred             CCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeec-CCEEEEEEecCCcchHHHHHhhcc---------------------
Confidence            3445667788999999999999999999997764 6789999999974 6666655321                     


Q ss_pred             CCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          88 ANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        88 ~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                    .+++.+++.++.||++|| .|||+..    .+.|++|.+
T Consensus       120 --------------~~~~~~~~~~~~qi~~~l-~~LH~~~ivH~dlkp~Nil~  157 (331)
T 4aaa_A          120 --------------GLDYQVVQKYLFQIINGI-GFCHSHNIIHRDIKPENILV  157 (331)
T ss_dssp             --------------CCCHHHHHHHHHHHHHHH-HHHHHTTCCCCCCCGGGEEE
T ss_pred             --------------CCCHHHHHHHHHHHHHHH-HHHHHCCEEccCcChheEEE
Confidence                          588999999999999999 9999864    445888765

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.32  E-value=6.4e-12  Score=98.36  Aligned_cols=85  Identities=15%  Similarity=0.177  Sum_probs=71.7

Q ss_pred             HHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSAS   93 (138)
Q Consensus        15 ~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (138)
                      .+.+++|+.+|++|+||||+++++.++ +.+.+++||||+. ++|.+++....                           
T Consensus        50 ~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~---------------------------  101 (304)
T 2jam_A           50 DSSLENEIAVLKKIKHENIVTLEDIYE-STTHYYLVMQLVSGGELFDRILERG---------------------------  101 (304)
T ss_dssp             --HHHHHHHHHHHCCCTTBCCEEEEEE-CSSEEEEEECCCCSCBHHHHHHHHS---------------------------
T ss_pred             hHHHHHHHHHHHhCCCCCeeehhhhcc-cCCEEEEEEEcCCCccHHHHHHHcC---------------------------
Confidence            356889999999999999999999776 4678999999995 69999997542                           


Q ss_pred             CCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          94 RPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        94 ~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                              .+++.++..++.||+.|| +|||+..    .+.|++|.+
T Consensus       102 --------~~~~~~~~~~~~qi~~~l-~~lH~~~i~H~dikp~NIl~  139 (304)
T 2jam_A          102 --------VYTEKDASLVIQQVLSAV-KYLHENGIVHRDLKPENLLY  139 (304)
T ss_dssp             --------CCCHHHHHHHHHHHHHHH-HHHHHTTCCCCSCCGGGCEE
T ss_pred             --------CCCHHHHHHHHHHHHHHH-HHHHHCCccccCCCHHHEEE
Confidence                    588899999999999999 9999854    445888775

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.31  E-value=7.5e-12  Score=99.11  Aligned_cols=90  Identities=10%  Similarity=0.024  Sum_probs=74.9

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeee-cCCeEEEEeccc-cccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEE-CPDALAFATEPV-YASLASILAFQESPAPNHSTNPVTGGSGSSPPPAN   89 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee-~~~~L~fVtE~V-~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (138)
                      ....+.+++|+.+|++|+||||+++++.+.. .++.+++||||+ .++|.+++....                       
T Consensus        65 ~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-----------------------  121 (327)
T 3lxl_A           65 PDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHR-----------------------  121 (327)
T ss_dssp             HHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEEEEEECCTTCBHHHHHHHHG-----------------------
T ss_pred             HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEEEEEeecCCCCHHHHHHhcc-----------------------
Confidence            4455778999999999999999999996653 356899999999 579999998532                       


Q ss_pred             CCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          90 QSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        90 ~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                 ..+++.++..++.||+.|| +|||+..    .+.|++|.+
T Consensus       122 -----------~~~~~~~~~~i~~qi~~al-~~lH~~~ivH~Dikp~NIl~  160 (327)
T 3lxl_A          122 -----------ARLDASRLLLYSSQICKGM-EYLGSRRCVHRDLAARNILV  160 (327)
T ss_dssp             -----------GGCCHHHHHHHHHHHHHHH-HHHHHTTEECSCCSGGGEEE
T ss_pred             -----------cCCCHHHHHHHHHHHHHHH-HHHHhCCccCCCCChhhEEE
Confidence                       1588999999999999999 9999864    445888875

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.31  E-value=7.6e-12  Score=100.32  Aligned_cols=91  Identities=12%  Similarity=0.021  Sum_probs=76.5

Q ss_pred             CcchHHHHHHHHHHHHhhhCCC--CCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCC
Q psy3822           9 KRKETVTEILRLGVKQLEVYRH--PKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPP   86 (138)
Q Consensus         9 ~~~e~~~e~lrrEi~~L~rLrH--PnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~   86 (138)
                      ...+...+.+++|+.+|.+|+|  |||+++++.+. +.+.+++|||+..++|.+++....                    
T Consensus        45 ~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~-~~~~~~lv~e~~~~~L~~~l~~~~--------------------  103 (343)
T 3dbq_A           45 EADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEI-TDQYIYMVMECGNIDLNSWLKKKK--------------------  103 (343)
T ss_dssp             TCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEE-CSSEEEEEECCCSEEHHHHHHHSC--------------------
T ss_pred             ccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEe-eCCEEEEEEeCCCCCHHHHHHhcC--------------------
Confidence            3445567889999999999987  99999999665 577999999987889999998542                    


Q ss_pred             CCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          87 PANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        87 ~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                     .+++.+++.++.||++|| +|||+..    .+.|++|.+
T Consensus       104 ---------------~~~~~~~~~i~~qi~~al-~~lH~~~iiHrDikp~NIll  141 (343)
T 3dbq_A          104 ---------------SIDPWERKSYWKNMLEAV-HTIHQHGIVHSDLKPANFLI  141 (343)
T ss_dssp             ---------------CCCHHHHHHHHHHHHHHH-HHHHHTTCCCCCCCGGGEEE
T ss_pred             ---------------CCCHHHHHHHHHHHHHHH-HHHHhCCeecCCCCcceEEE
Confidence                           588899999999999999 9999764    445888765

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.31  E-value=6.9e-12  Score=96.46  Aligned_cols=90  Identities=13%  Similarity=0.062  Sum_probs=73.8

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeec------------CCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEEC------------PDALAFATEPVY-ASLASILAFQESPAPNHSTNPVT   78 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~------------~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~   78 (138)
                      +...+.+.+|+.+|++|+||||+++++.+.+.            .+.+++||||+. ++|.+++....            
T Consensus        43 ~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~------------  110 (303)
T 1zy4_A           43 EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSEN------------  110 (303)
T ss_dssp             HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC------CEEEEEEEEECCCSCBHHHHHHHSC------------
T ss_pred             HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccccCCceEEEEecCCCCCHHHhhhccc------------
Confidence            44568889999999999999999999876542            457999999995 69999998532            


Q ss_pred             CCCCCCCCCCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          79 GGSGSSPPPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                            ..+++.++..++.||++|| +|||+..    .+.|++|.+
T Consensus       111 ----------------------~~~~~~~~~~i~~qi~~~l-~~LH~~~i~H~dlkp~Nil~  149 (303)
T 1zy4_A          111 ----------------------LNQQRDEYWRLFRQILEAL-SYIHSQGIIHRDLKPMNIFI  149 (303)
T ss_dssp             ----------------------GGGCHHHHHHHHHHHHHHH-HHHHHTTCCCSCCCGGGEEE
T ss_pred             ----------------------cccchHHHHHHHHHHHHHH-HHHHhCCeecccCCHHhEEE
Confidence                                  2578889999999999999 9999864    445887765

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.31  E-value=6.6e-12  Score=104.66  Aligned_cols=85  Identities=12%  Similarity=0.192  Sum_probs=73.2

Q ss_pred             HHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSAS   93 (138)
Q Consensus        15 ~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (138)
                      .+.+.+|+.+|++|+||||+++++.++ +.+.+|+||||+. ++|.+++....                           
T Consensus        59 ~~~~~~E~~il~~l~hp~Iv~l~~~~~-~~~~~~lv~e~~~gg~L~~~l~~~~---------------------------  110 (384)
T 4fr4_A           59 VRNVFKELQIMQGLEHPFLVNLWYSFQ-DEEDMFMVVDLLLGGDLRYHLQQNV---------------------------  110 (384)
T ss_dssp             HHHHHHHHHHHHTCCCTTBCCEEEEEE-CSSEEEEEECCCTTEEHHHHHHTTC---------------------------
T ss_pred             HHHHHHHHHHHHhCCCCCCCcEEEEEE-eCCEEEEEEecCCCCcHHHHHHhcC---------------------------
Confidence            467889999999999999999999876 4679999999994 69999998432                           


Q ss_pred             CCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          94 RPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        94 ~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                              .+++.+++.++.||+.|| .|||+..    .+.|++|.+
T Consensus       111 --------~l~~~~~~~~~~qi~~aL-~~LH~~givHrDlkp~NIll  148 (384)
T 4fr4_A          111 --------HFKEETVKLFICELVMAL-DYLQNQRIIHRDMKPDNILL  148 (384)
T ss_dssp             --------CCCHHHHHHHHHHHHHHH-HHHHHTTEECCCCSGGGEEE
T ss_pred             --------CCCHHHHHHHHHHHHHHH-HHHHHCCceeccCcHHHeEE
Confidence                    589999999999999999 9999754    455888765

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.31  E-value=6e-12  Score=99.67  Aligned_cols=104  Identities=16%  Similarity=0.130  Sum_probs=74.1

Q ss_pred             hHHHHHHHHHHHHhhhC-CCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVY-RHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPAN   89 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rL-rHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (138)
                      ....+.+.+|+.+|.+| +||||+++++.+++ .+.+++||||+. ++|.+++.........               ++ 
T Consensus        66 ~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~---------------~~-  128 (327)
T 1fvr_A           66 KDDHRDFAGELEVLCKLGHHPNIINLLGACEH-RGYLYLAIEYAPHGNLLDFLRKSRVLETD---------------PA-  128 (327)
T ss_dssp             ----CHHHHHHHHHTTCCCCTTBCCEEEEEEE-TTEEEEEECCCTTCBHHHHHHTTCHHHHC---------------HH-
T ss_pred             hHHHHHHHHHHHHHHhccCCCchhhhceeeee-CCceEEEEecCCCCCHHHHHHhccccccc---------------cc-
Confidence            34556789999999999 99999999997764 679999999995 6999999854210000               00 


Q ss_pred             CCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          90 QSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        90 ~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                         ..........+++.++..++.||++|| .|||+..    .+.|++|.+
T Consensus       129 ---~~~~~~~~~~~~~~~~~~i~~qi~~aL-~~LH~~~ivH~dlkp~NIl~  175 (327)
T 1fvr_A          129 ---FAIANSTASTLSSQQLLHFAADVARGM-DYLSQKQFIHRDLAARNILV  175 (327)
T ss_dssp             ---HHHHTTBSCSSCHHHHHHHHHHHHHHH-HHHHHTTEECSCCSGGGEEE
T ss_pred             ---ccccccccccCCHHHHHHHHHHHHHHH-HHHHhCCccCCCCccceEEE
Confidence               000000112689999999999999999 9999854    455888765

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.31  E-value=6.1e-12  Score=97.07  Aligned_cols=85  Identities=13%  Similarity=0.058  Sum_probs=72.1

Q ss_pred             HHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          16 EILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASR   94 (138)
Q Consensus        16 e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (138)
                      +.+.+|+.+|++|+||||+++++.++ +.+.+++||||+. ++|.+++....                            
T Consensus        64 ~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~----------------------------  114 (283)
T 3gen_A           64 DEFIEEAKVMMNLSHEKLVQLYGVCT-KQRPIFIITEYMANGCLLNYLREMR----------------------------  114 (283)
T ss_dssp             HHHHHHHHHHHTCCCTTBCCEEEEEC-SSSSEEEEECCCTTCBHHHHHHCGG----------------------------
T ss_pred             HHHHHHHHHHhcCCCCCEeeEEEEEe-cCCCeEEEEeccCCCcHHHHHHHhc----------------------------
Confidence            56789999999999999999999775 4678999999995 79999997532                            


Q ss_pred             CcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          95 PTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        95 ~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                            ..+++.++..++.||++|| +|||+..    .+.|++|.+
T Consensus       115 ------~~~~~~~~~~i~~qi~~~l-~~lH~~~i~H~dikp~Nili  153 (283)
T 3gen_A          115 ------HRFQTQQLLEMCKDVCEAM-EYLESKQFLHRDLAARNCLV  153 (283)
T ss_dssp             ------GCCCHHHHHHHHHHHHHHH-HHHHHTTCCCSSCSGGGEEE
T ss_pred             ------cCCCHHHHHHHHHHHHHHH-HHHHHCCccCCCCccceEEE
Confidence                  1588999999999999999 9999754    445888765

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.31  E-value=1.2e-12  Score=102.15  Aligned_cols=86  Identities=14%  Similarity=0.196  Sum_probs=68.9

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeec-CCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEEC-PDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~-~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      ..+.+++|+.+|++|+||||+++++.+++. .+.+++||||+. ++|.+++.                            
T Consensus        79 ~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~----------------------------  130 (298)
T 2zv2_A           79 PIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT----------------------------  130 (298)
T ss_dssp             --CHHHHHHHHHHTCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC----------------------------
T ss_pred             hHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh----------------------------
Confidence            356789999999999999999999987753 468999999995 57654322                            


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                              ...+++.+++.++.||++|| +|||+..    .+.|++|.+
T Consensus       131 --------~~~~~~~~~~~~~~qi~~~l-~~lH~~~ivH~Dlkp~Nil~  170 (298)
T 2zv2_A          131 --------LKPLSEDQARFYFQDLIKGI-EYLHYQKIIHRDIKPSNLLV  170 (298)
T ss_dssp             --------SSCCCHHHHHHHHHHHHHHH-HHHHHTTEECCCCCGGGEEE
T ss_pred             --------cCCCCHHHHHHHHHHHHHHH-HHHHHCCeeccCCCHHHEEE
Confidence                    12589999999999999999 9999864    455888765

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.31  E-value=6e-12  Score=97.74  Aligned_cols=86  Identities=19%  Similarity=0.218  Sum_probs=73.1

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ..+.+.+|+.+|++|+||||+++++.++ ..+.+++|||++. ++|.+.+....                          
T Consensus        64 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~--------------------------  116 (287)
T 2wei_A           64 DTSTILREVELLKKLDHPNIMKLFEILE-DSSSFYIVGELYTGGELFDEIIKRK--------------------------  116 (287)
T ss_dssp             CHHHHHHHHHHHHTCCCTTBCCEEEEEE-CSSEEEEEECCCCSCBHHHHHHHHS--------------------------
T ss_pred             HHHHHHHHHHHHHhccCCCccEEEEEEe-CCCeEEEEEEccCCCCHHHHHHhcC--------------------------
Confidence            4577899999999999999999999776 4679999999995 69999887542                          


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                               .+++.++..++.||++|| .|||+..    .+.|++|.+
T Consensus       117 ---------~~~~~~~~~i~~qi~~~l-~~LH~~~i~H~dl~p~NIlv  154 (287)
T 2wei_A          117 ---------RFSEHDAARIIKQVFSGI-TYMHKHNIVHRDLKPENILL  154 (287)
T ss_dssp             ---------SCCHHHHHHHHHHHHHHH-HHHHHTTCCCSCCCGGGEEE
T ss_pred             ---------CCCHHHHHHHHHHHHHHH-HHHHHCCeeccCCChhhEEE
Confidence                     588899999999999999 9999764    445888765

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.31  E-value=6.9e-12  Score=99.80  Aligned_cols=107  Identities=14%  Similarity=0.101  Sum_probs=77.5

Q ss_pred             CcchHHHHHHHHHHHHhhhC-CCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCC
Q psy3822           9 KRKETVTEILRLGVKQLEVY-RHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPP   86 (138)
Q Consensus         9 ~~~e~~~e~lrrEi~~L~rL-rHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~   86 (138)
                      ...+...+.+.+|+.+|++| +||||+++++.+. ..+.+++||||+. ++|.+++.......            .... 
T Consensus        78 ~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~------------~~~~-  143 (334)
T 2pvf_A           78 DATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT-QDGPLYVIVEYASKGNLREYLRARRPPG------------MEYS-  143 (334)
T ss_dssp             TCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCCEEEEECCTTCBHHHHHHTTSCTT------------CCSC-
T ss_pred             CCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEc-cCCceEEEEECCCCCcHHHHHHHhcccc------------cccc-
Confidence            33455678899999999999 9999999999776 4678999999995 69999998643210            0000 


Q ss_pred             CCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          87 PANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        87 ~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                            ....+.....+++.++..++.||++|| .|||+..    .+.|++|.+
T Consensus       144 ------~~~~~~~~~~~~~~~~~~i~~qi~~aL-~~LH~~~ivH~Dlkp~NIll  190 (334)
T 2pvf_A          144 ------YDINRVPEEQMTFKDLVSCTYQLARGM-EYLASQKCIHRDLAARNVLV  190 (334)
T ss_dssp             ------C--------CCCHHHHHHHHHHHHHHH-HHHHHTTEECSCCSGGGEEE
T ss_pred             ------ccccccccccCCHHHHHHHHHHHHHHH-HHHHhCCeeCCCCccceEEE
Confidence                  000111223589999999999999999 9999864    445887765

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.31  E-value=3.5e-12  Score=101.23  Aligned_cols=111  Identities=13%  Similarity=0.034  Sum_probs=73.9

Q ss_pred             hHHHHHHHHHHHHhhhC-CCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVY-RHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPAN   89 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rL-rHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (138)
                      ....+.+.+|+.+|.+| +||||+++++.++ ..+.+++||||+. ++|.+++.......       .... ..+.... 
T Consensus        89 ~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~-~~~~~~lv~e~~~~g~L~~~l~~~~~~~-------~~~~-~~~~~~~-  158 (344)
T 1rjb_A           89 SSEREALMSELKMMTQLGSHENIVNLLGACT-LSGPIYLIFEYCCYGDLLNYLRSKREKF-------SEDE-IEYENQK-  158 (344)
T ss_dssp             ---CHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSSCEEEEECCTTCBHHHHHHTTTTCC--------------------
T ss_pred             HHHHHHHHHHHHHHHhhcCCCCeeeEEEEEe-eCCccEEEEecCCCCcHHHHHhhccccc-------cccc-cchhhhc-
Confidence            44567889999999999 8999999999776 4678999999995 69999998543210       0000 0000000 


Q ss_pred             CCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          90 QSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        90 ~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                         ..........+++.++..++.||++|| +|||+..    .+.|++|.+
T Consensus       159 ---~~~~~~~~~~l~~~~~~~i~~qi~~aL-~~LH~~~ivH~Dikp~NIll  205 (344)
T 1rjb_A          159 ---RLEEEEDLNVLTFEDLLCFAYQVAKGM-EFLEFKSCVHRDLAARNVLV  205 (344)
T ss_dssp             -------------CCHHHHHHHHHHHHHHH-HHHHHTTEEETTCSGGGEEE
T ss_pred             ---ccccccccccCCHHHHHHHHHHHHHHH-HHHHhCCcccCCCChhhEEE
Confidence               000001112589999999999999999 9999864    455888765

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.30  E-value=5.7e-12  Score=102.86  Aligned_cols=107  Identities=17%  Similarity=0.175  Sum_probs=79.7

Q ss_pred             CcchHHHHHHHHHHHHhhhC-CCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCC
Q psy3822           9 KRKETVTEILRLGVKQLEVY-RHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPP   86 (138)
Q Consensus         9 ~~~e~~~e~lrrEi~~L~rL-rHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~   86 (138)
                      ...+...+.+.+|+.+|++| +||||+++++.+. +.+.+++||||+. ++|.+++........            ... 
T Consensus       112 ~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~-~~~~~~lv~e~~~~g~L~~~l~~~~~~~~------------~~~-  177 (382)
T 3tt0_A          112 DATEKDLSDLISEMEMMKMIGKHKNIINLLGACT-QDGPLYVIVEYASKGNLREYLQARRPPGL------------EYS-  177 (382)
T ss_dssp             TCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSSCEEEEECCTTCBHHHHHHHTCCSSS------------SSC-
T ss_pred             ccCHHHHHHHHHHHHHHHHhcCCchhhhheeeec-cCCceEEEEEecCCCcHHHHHHHhccccc------------ccc-
Confidence            34456678899999999999 9999999999776 4678999999995 699999986542100            000 


Q ss_pred             CCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          87 PANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        87 ~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                            ..........+++.++..++.||++|| +|||+..    .+.|++|.+
T Consensus       178 ------~~~~~~~~~~l~~~~~~~i~~qi~~aL-~~LH~~~ivH~Dlkp~NIll  224 (382)
T 3tt0_A          178 ------YNPSHNPEEQLSSKDLVSCAYQVARGM-EYLASKKCIHRDLAARNVLV  224 (382)
T ss_dssp             ------CCCCSSCCCCCCHHHHHHHHHHHHHHH-HHHHHTTCCCSCCCGGGEEE
T ss_pred             ------cccccccccccCHHHHHHHHHHHHHHH-HHHHhCCEecCCCCcceEEE
Confidence                  000111223699999999999999999 9999764    445888765

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.30  E-value=9.4e-12  Score=96.45  Aligned_cols=88  Identities=14%  Similarity=0.103  Sum_probs=74.3

Q ss_pred             hHHHHHHHHHHHHhhhCC-CCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYR-HPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPAN   89 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLr-HPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (138)
                      +...+.+.+|+.+|++|+ ||||+++++.++ +.+.+++||||+. ++|.+++....                       
T Consensus        64 ~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~-----------------------  119 (298)
T 1phk_A           64 QELREATLKEVDILRKVSGHPNIIQLKDTYE-TNTFFFLVFDLMKKGELFDYLTEKV-----------------------  119 (298)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE-CSSEEEEEEECCTTCBHHHHHHHHS-----------------------
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCEeeeeeeec-cCCeEEEEEeccCCCcHHHHHhccC-----------------------
Confidence            345678899999999997 999999999775 5779999999996 69999998542                       


Q ss_pred             CCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          90 QSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        90 ~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                  .+++.++..++.||+.|| +|||+..    .+-|++|.+
T Consensus       120 ------------~~~~~~~~~~~~qi~~~l-~~lH~~~i~H~dl~p~Nil~  157 (298)
T 1phk_A          120 ------------TLSEKETRKIMRALLEVI-CALHKLNIVHRDLKPENILL  157 (298)
T ss_dssp             ------------SCCHHHHHHHHHHHHHHH-HHHHHTTEECSCCSGGGEEE
T ss_pred             ------------CCCHHHHHHHHHHHHHHH-HHHHHCCcccCCCCcceEEE
Confidence                        588899999999999999 9999864    445777764

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.30  E-value=9e-12  Score=101.31  Aligned_cols=89  Identities=13%  Similarity=0.164  Sum_probs=74.0

Q ss_pred             cchHHHHHHHHHHHHhhhCCCCCeeEEeceeeecC-----CeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCC
Q psy3822          10 RKETVTEILRLGVKQLEVYRHPKILSVLHPIEECP-----DALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSS   84 (138)
Q Consensus        10 ~~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~-----~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~   84 (138)
                      ..+...+.+.+|+.+|++|+||||+++++.+....     ..+|+||||+.++|.+.+..                    
T Consensus        63 ~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~--------------------  122 (371)
T 2xrw_A           63 QNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM--------------------  122 (371)
T ss_dssp             SSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCEEEEEEECCSEEHHHHHHS--------------------
T ss_pred             CChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccceEEEEEcCCCCHHHHHhh--------------------
Confidence            34556688899999999999999999999776432     27999999999999988861                    


Q ss_pred             CCCCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          85 PPPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                       .+++.+++.++.||+.|| +|||+..    .+.|++|.+
T Consensus       123 -----------------~~~~~~~~~i~~qi~~al-~~lH~~~ivH~Dlkp~NIl~  160 (371)
T 2xrw_A          123 -----------------ELDHERMSYLLYQMLCGI-KHLHSAGIIHRDLKPSNIVV  160 (371)
T ss_dssp             -----------------CCCHHHHHHHHHHHHHHH-HHHHHTTCCCSCCCGGGEEE
T ss_pred             -----------------ccCHHHHHHHHHHHHHHH-HHHHHCCeecccCCHHHEEE
Confidence                             478889999999999999 9999854    445888765

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.30  E-value=4.3e-12  Score=104.23  Aligned_cols=89  Identities=16%  Similarity=0.132  Sum_probs=73.8

Q ss_pred             HHHHHHHHHHhhhCCCCCeeEEeceeeecC-CeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVYRHPKILSVLHPIEECP-DALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        15 ~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~-~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      .+.+.+|+.+|++|+||||+++++.+++.. ..+++||||+. ++|.+++.....                         
T Consensus        51 ~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~-------------------------  105 (396)
T 4eut_A           51 VDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSN-------------------------  105 (396)
T ss_dssp             HHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEECCCTTEEHHHHTTSGGG-------------------------
T ss_pred             HHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEecCCCCCHHHHHHhhhc-------------------------
Confidence            467789999999999999999999776543 37999999995 699999975432                         


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                             ...+++.+++.++.||+.|| +|||+..    .+.|++|.+
T Consensus       106 -------~~~l~~~~~~~i~~qi~~aL-~~LH~~~ivH~Dlkp~NIll  145 (396)
T 4eut_A          106 -------AYGLPESEFLIVLRDVVGGM-NHLRENGIVHRNIKPGNIMR  145 (396)
T ss_dssp             -------TTCCCHHHHHHHHHHHHHHH-HHHHHTTEECCCCCGGGEEE
T ss_pred             -------ccCCCHHHHHHHHHHHHHHH-HHHHHCCEEECCcCHHHEEE
Confidence                   12489999999999999999 9999864    556888865

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.30  E-value=7.5e-12  Score=95.33  Aligned_cols=85  Identities=15%  Similarity=0.078  Sum_probs=72.0

Q ss_pred             HHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          16 EILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASR   94 (138)
Q Consensus        16 e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (138)
                      +.+++|+.+|++|+||||+++++.++ +.+.+++||||+. ++|.+++....                            
T Consensus        48 ~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~----------------------------   98 (267)
T 3t9t_A           48 EDFIEEAEVMMKLSHPKLVQLYGVCL-EQAPICLVTEFMEHGCLSDYLRTQR----------------------------   98 (267)
T ss_dssp             HHHHHHHHHHHTCCCTTBCCEEEEEC-SSSSCEEEECCCTTCBHHHHHHHTT----------------------------
T ss_pred             HHHHHHHHHHHhCCCCCEeeEEEEEc-cCCCeEEEEeCCCCCcHHHHHhhCc----------------------------
Confidence            57899999999999999999999776 4678999999995 69999997542                            


Q ss_pred             CcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          95 PTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        95 ~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                            ..+++.++..++.||++|| .|||+..    .+.|++|.+
T Consensus        99 ------~~~~~~~~~~~~~~i~~~l-~~lH~~~i~H~dl~p~Nili  137 (267)
T 3t9t_A           99 ------GLFAAETLLGMCLDVCEGM-AYLEEACVIHRDLAARNCLV  137 (267)
T ss_dssp             ------TCCCHHHHHHHHHHHHHHH-HHHHHTTCCCSSCCGGGEEE
T ss_pred             ------ccCCHHHHHHHHHHHHHHH-HHHHhCCcccCCCchheEEE
Confidence                  1578899999999999999 9999764    445887765

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.30  E-value=7.2e-12  Score=96.65  Aligned_cols=88  Identities=15%  Similarity=0.141  Sum_probs=74.1

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ..+.+.+|+.+|++|+||||+++++.+. +.+.+++||||+. ++|.+++.....                         
T Consensus        52 ~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~~v~e~~~~~~L~~~~~~~~~-------------------------  105 (288)
T 3kfa_A           52 EVEEFLKEAAVMKEIKHPNLVQLLGVCT-REPPFYIITEFMTYGNLLDYLRECNR-------------------------  105 (288)
T ss_dssp             HHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSSEEEEEECCTTEEHHHHHHHCCT-------------------------
T ss_pred             HHHHHHHHHHHHHhCCCCCEeeEEEEEc-cCCCEEEEEEcCCCCcHHHHHHhccc-------------------------
Confidence            4577899999999999999999999765 4678999999996 799999985432                         


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                              ..+++.++..++.||+.|| +|||+..    .+.|++|.+
T Consensus       106 --------~~~~~~~~~~i~~~i~~~l-~~lH~~~i~H~dikp~Nil~  144 (288)
T 3kfa_A          106 --------QEVSAVVLLYMATQISSAM-EYLEKKNFIHRDLAARNCLV  144 (288)
T ss_dssp             --------TTSCHHHHHHHHHHHHHHH-HHHHHHTCCCSCCSGGGEEE
T ss_pred             --------CCccHhHHHHHHHHHHHHH-HHHHHCCccCCCCCcceEEE
Confidence                    1588999999999999999 9999753    455888765

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.30  E-value=2.4e-12  Score=103.42  Aligned_cols=87  Identities=15%  Similarity=0.173  Sum_probs=72.6

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSAS   93 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (138)
                      ..+.+.+|+.+|++|+||||+++++.++ +.+.+++||||+.++|.+++....                           
T Consensus        55 ~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~~~l~~~~~~~~---------------------------  106 (346)
T 1ua2_A           55 INRTALREIKLLQELSHPNIIGLLDAFG-HKSNISLVFDFMETDLEVIIKDNS---------------------------  106 (346)
T ss_dssp             -CTHHHHHHHHHHHCCCTTBCCEEEEEC-CTTCCEEEEECCSEEHHHHHTTCC---------------------------
T ss_pred             hhHHHHHHHHHHhhCCCCCCCeEEEEEe-eCCceEEEEEcCCCCHHHHHHhcC---------------------------
Confidence            3456789999999999999999999776 467899999999999999887432                           


Q ss_pred             CCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          94 RPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        94 ~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                             ..+++.+++.++.||++|| +|||+..    .+.|++|.+
T Consensus       107 -------~~~~~~~~~~~~~qi~~~l-~~lH~~~ivH~Dlkp~Nil~  145 (346)
T 1ua2_A          107 -------LVLTPSHIKAYMLMTLQGL-EYLHQHWILHRDLKPNNLLL  145 (346)
T ss_dssp             -------SSCCSSHHHHHHHHHHHHH-HHHHHTTCCCCCCCGGGEEE
T ss_pred             -------cCCCHHHHHHHHHHHHHHH-HHHHHCCEECCCCCHHHEEE
Confidence                   1578889999999999999 9999754    445888765

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.30  E-value=4.7e-12  Score=102.61  Aligned_cols=85  Identities=19%  Similarity=0.284  Sum_probs=67.2

Q ss_pred             HHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSAS   93 (138)
Q Consensus        15 ~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (138)
                      .+.+++|+.+|++|+||||+++++.++ +.+.+++||||+. ++|.+++....                           
T Consensus        92 ~~~~~~E~~~l~~l~h~niv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~---------------------------  143 (349)
T 2w4o_A           92 KKIVRTEIGVLLRLSHPNIIKLKEIFE-TPTEISLVLELVTGGELFDRIVEKG---------------------------  143 (349)
T ss_dssp             -------CHHHHHCCCTTBCCEEEEEE-CSSEEEEEECCCCSCBHHHHHTTCS---------------------------
T ss_pred             HHHHHHHHHHHHhCCCCCCcceeeeEe-cCCeEEEEEEeCCCCCHHHHHHhcC---------------------------
Confidence            367889999999999999999999776 4678999999995 69999997432                           


Q ss_pred             CCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          94 RPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        94 ~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                              .+++.+++.++.||++|| +|||+..    .+.|++|.+
T Consensus       144 --------~~~~~~~~~i~~qi~~~L-~~LH~~~ivH~Dikp~NIll  181 (349)
T 2w4o_A          144 --------YYSERDAADAVKQILEAV-AYLHENGIVHRDLKPENLLY  181 (349)
T ss_dssp             --------SCCHHHHHHHHHHHHHHH-HHHHHTTCCCCCCCGGGEEE
T ss_pred             --------CCCHHHHHHHHHHHHHHH-HHHHHCCeEecCCCcccEEE
Confidence                    588999999999999999 9999754    445888765

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.30  E-value=8.1e-12  Score=104.78  Aligned_cols=89  Identities=17%  Similarity=0.079  Sum_probs=74.0

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ..+.+.+|+.+|++|+||||+++++.+.+..+.+++||||+. ++|.++|.....                         
T Consensus       229 ~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~-------------------------  283 (450)
T 1k9a_A          229 TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR-------------------------  283 (450)
T ss_dssp             TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCTTCBHHHHHHHHCT-------------------------
T ss_pred             HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecCCCcHHHHHHhcCC-------------------------
Confidence            346789999999999999999999987765568999999995 699999986532                         


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                              ..+++.++..++.||++|| +|||+..    .+.|++|.+
T Consensus       284 --------~~~~~~~~~~~~~qi~~~l-~~LH~~~ivHrDlkp~Nill  322 (450)
T 1k9a_A          284 --------SVLGGDCLLKFSLDVCEAM-EYLEGNNFVHRDLAARNVLV  322 (450)
T ss_dssp             --------TTCCHHHHHHHHHHHHHHH-HHHHHTTEECSCCCGGGEEE
T ss_pred             --------CCCCHHHHHHHHHHHHHHH-HHHHhCCeeCCCCCHhhEEE
Confidence                    1478889999999999999 9999864    445777765

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.29  E-value=4.3e-12  Score=98.12  Aligned_cols=95  Identities=15%  Similarity=0.144  Sum_probs=66.2

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      ...+.+.+|+..|.+|+||||+++++.+. +.+.+++||||+. ++|.+++.......                      
T Consensus        55 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~----------------------  111 (303)
T 2vwi_A           55 TSMDELLKEIQAMSQCHHPNIVSYYTSFV-VKDELWLVMKLLSGGSVLDIIKHIVAKG----------------------  111 (303)
T ss_dssp             -----------CCCCCCCTTBCCEEEEEE-SSSCEEEEEECCTTCBHHHHHHHHHHTT----------------------
T ss_pred             hhHHHHHHHHHHHhhcCCCCEeeEEEEEe-ecCCcEEEehhccCCchHHHHHHHhhcc----------------------
Confidence            44577899999999999999999999776 4678999999995 69999997532110                      


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                           ......+++.++..++.||++|| .|||+..    .+-|++|.+
T Consensus       112 -----~~~~~~~~~~~~~~i~~qi~~~l-~~lH~~~i~H~dl~p~Nil~  154 (303)
T 2vwi_A          112 -----EHKSGVLDESTIATILREVLEGL-EYLHKNGQIHRDVKAGNILL  154 (303)
T ss_dssp             -----TTTTCSSCHHHHHHHHHHHHHHH-HHHHHTTCCCCCCSGGGEEE
T ss_pred             -----ccccCCCCHHHHHHHHHHHHHHH-HHHHhCCCCCCCCChhhEEE
Confidence                 00122689999999999999999 9999754    445888765

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.29  E-value=4.8e-12  Score=100.06  Aligned_cols=88  Identities=16%  Similarity=0.171  Sum_probs=71.0

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      ...+.+.+|+.+|++|+||||+++++.+.   +.+++||||+. ++|.+++......                       
T Consensus        43 ~~~~~~~~E~~~l~~l~hp~iv~~~~~~~---~~~~lv~e~~~~~~L~~~l~~~~~~-----------------------   96 (307)
T 2eva_A           43 SERKAFIVELRQLSRVNHPNIVKLYGACL---NPVCLVMEYAEGGSLYNVLHGAEPL-----------------------   96 (307)
T ss_dssp             THHHHHHHHHHHHHHCCCTTBCCEEEBCT---TTTEEEEECCTTCBHHHHHHCSSSE-----------------------
T ss_pred             hHHHHHHHHHHHHhcCCCCCcCeEEEEEc---CCcEEEEEcCCCCCHHHHHhccCCC-----------------------
Confidence            34577899999999999999999999664   35899999995 6999999854311                       


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCC-------CCcccCccee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVP-------STYLPSSVAF  136 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~-------a~~~~~~~~~  136 (138)
                               ..+++.++..++.||++|| +|||+.       ..+.|++|.+
T Consensus        97 ---------~~~~~~~~~~~~~qi~~~l-~~LH~~~~~~ivH~dlkp~NIll  138 (307)
T 2eva_A           97 ---------PYYTAAHAMSWCLQCSQGV-AYLHSMQPKALIHRDLKPPNLLL  138 (307)
T ss_dssp             ---------ECCCHHHHHHHHHHHHHHH-HHHHTCSSSCCCCCCCSGGGEEE
T ss_pred             ---------CccCHHHHHHHHHHHHHHH-HHHHhCCCCCeecCCCChhHEEE
Confidence                     1478889999999999999 999983       2345888765

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.29  E-value=6.8e-12  Score=106.31  Aligned_cols=93  Identities=15%  Similarity=0.180  Sum_probs=74.9

Q ss_pred             CCCCcchHHHHHHHHHHHHhhhCCCCCeeEEeceeeec-----CCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCC
Q psy3822           6 HKPKRKETVTEILRLGVKQLEVYRHPKILSVLHPIEEC-----PDALAFATEPVYASLASILAFQESPAPNHSTNPVTGG   80 (138)
Q Consensus         6 ~K~~~~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~-----~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~   80 (138)
                      .+........+.+.+|+.+|++|+||||+++++.+...     ...+|+||||+.++|.+.+..                
T Consensus        96 ~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~E~~~~~l~~~~~~----------------  159 (464)
T 3ttj_A           96 SRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM----------------  159 (464)
T ss_dssp             ESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEEEEECCSEEHHHHHTS----------------
T ss_pred             CccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCeEEEEEeCCCCCHHHHHhh----------------
Confidence            33333455678889999999999999999999977532     246899999999888887751                


Q ss_pred             CCCCCCCCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          81 SGSSPPPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                           .+++.+++.++.||+.|| +|||+..    .+.|++|.+
T Consensus       160 ---------------------~l~~~~~~~~~~qil~aL-~~lH~~~iiHrDlkp~NIll  197 (464)
T 3ttj_A          160 ---------------------ELDHERMSYLLYQMLCGI-KHLHSAGIIHRDLKPSNIVV  197 (464)
T ss_dssp             ---------------------CCCHHHHHHHHHHHHHHH-HHHHHTTCCCCCCCGGGEEE
T ss_pred             ---------------------cCCHHHHHHHHHHHHHHH-HHHHHCCcccCCCChHhEEE
Confidence                                 478899999999999999 9999854    445888765

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.29  E-value=9.7e-12  Score=97.24  Aligned_cols=92  Identities=13%  Similarity=0.022  Sum_probs=74.6

Q ss_pred             hHHHHHHHHHHHHhhhCC-CCCeeEEeceee-------ecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYR-HPKILSVLHPIE-------ECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGS   83 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLr-HPnIL~l~e~~e-------e~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~   83 (138)
                      ....+.+.+|+..|.+|+ ||||+++++.+.       +....+++||||+.++|.+++.....                
T Consensus        66 ~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~L~~~l~~~~~----------------  129 (337)
T 3ll6_A           66 EEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMES----------------  129 (337)
T ss_dssp             HHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEEEEEEECCSEEHHHHHHHHHT----------------
T ss_pred             hHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCceEEEEEEecCCCHHHHHHHhhc----------------
Confidence            445577899999999997 999999998763       33457999999999999999975432                


Q ss_pred             CCCCCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC------CcccCccee
Q psy3822          84 SPPPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS------TYLPSSVAF  136 (138)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a------~~~~~~~~~  136 (138)
                                      ...+++.++..++.||++|| +|||+..      .+.|++|.+
T Consensus       130 ----------------~~~~~~~~~~~i~~qi~~~l-~~LH~~~~~ivH~Dikp~NIl~  171 (337)
T 3ll6_A          130 ----------------RGPLSCDTVLKIFYQTCRAV-QHMHRQKPPIIHRDLKVENLLL  171 (337)
T ss_dssp             ----------------TCSCCHHHHHHHHHHHHHHH-HHHHTSSSCCBCCCCCGGGCEE
T ss_pred             ----------------cCCCCHHHHHHHHHHHHHHH-HHHHhCCCCEEEccCCcccEEE
Confidence                            12589999999999999999 9999875      234888765

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.29  E-value=1.7e-11  Score=96.10  Aligned_cols=96  Identities=10%  Similarity=0.082  Sum_probs=74.8

Q ss_pred             chHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCC----eEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCC
Q psy3822          11 KETVTEILRLGVKQLEVYRHPKILSVLHPIEECPD----ALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSP   85 (138)
Q Consensus        11 ~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~----~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~   85 (138)
                      .+...+.+.+|+..|++|+||||+++++.+.+...    ..++||||+. ++|.+++.......                
T Consensus        76 ~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~----------------  139 (313)
T 3brb_A           76 SQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLET----------------  139 (313)
T ss_dssp             CHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-------CEEEEEECCTTCBHHHHHHHTTBTT----------------
T ss_pred             chhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCCcccEEEEecccCCCHHHHHHHhhhhc----------------
Confidence            44566888999999999999999999997765332    4699999996 69999996543110                


Q ss_pred             CCCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          86 PPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        86 ~~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                   ....+++.++..++.||++|| .|||+..    .+.|++|.+
T Consensus       140 -------------~~~~~~~~~~~~i~~qi~~aL-~~LH~~~ivH~dikp~NIli  180 (313)
T 3brb_A          140 -------------GPKHIPLQTLLKFMVDIALGM-EYLSNRNFLHRDLAARNCML  180 (313)
T ss_dssp             -------------SCCCCCHHHHHHHHHHHHHHH-HHHHTTTCCCCCCSGGGEEE
T ss_pred             -------------CCccCCHHHHHHHHHHHHHHH-HHHHhCCcccCCCCcceEEE
Confidence                         112689999999999999999 9999864    445888765

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.29  E-value=7.1e-12  Score=97.33  Aligned_cols=87  Identities=15%  Similarity=0.118  Sum_probs=72.4

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ..+.+.+|+.+|++|+||||+++++.+.+ .+.+++||||+. ++|.+++....                          
T Consensus        59 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~l~~~~~~~~--------------------------  111 (302)
T 2j7t_A           59 ELEDYIVEIEILATCDHPYIVKLLGAYYH-DGKLWIMIEFCPGGAVDAIMLELD--------------------------  111 (302)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEEEC-C-CEEEEEECCTTEEHHHHHHHHT--------------------------
T ss_pred             HHHHHHHHHHHHhcCCCCCEeeeeeeeee-CCeEEEEEEeCCCCcHHHHHHhhc--------------------------
Confidence            35678899999999999999999997764 678999999995 69999987543                          


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                              ..+++.++..++.||++|| .|||+..    .+.|++|.+
T Consensus       112 --------~~~~~~~~~~~~~~i~~~l-~~lH~~~i~H~dlkp~Nil~  150 (302)
T 2j7t_A          112 --------RGLTEPQIQVVCRQMLEAL-NFLHSKRIIHRDLKAGNVLM  150 (302)
T ss_dssp             --------SCCCHHHHHHHHHHHHHHH-HHHHHTTCCCCCCSGGGEEE
T ss_pred             --------cCCCHHHHHHHHHHHHHHH-HHHhcCCcccCCCCHHHEEE
Confidence                    1588999999999999999 9999764    445888765

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.29  E-value=1.1e-12  Score=104.45  Aligned_cols=84  Identities=15%  Similarity=0.088  Sum_probs=71.5

Q ss_pred             HHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q psy3822          17 ILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASRPT   96 (138)
Q Consensus        17 ~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   96 (138)
                      .+.+|+.+|++|+||||+++++.++ +.+.+++||||+.++|.+++.....                             
T Consensus        46 ~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~~~l~~~~~~~~~-----------------------------   95 (324)
T 3mtl_A           46 TAIREVSLLKDLKHANIVTLHDIIH-TEKSLTLVFEYLDKDLKQYLDDCGN-----------------------------   95 (324)
T ss_dssp             CCCCCHHHHSCCCCTTBCCEEEEEE-CSSCEEEEEECCSEEHHHHHHHTTT-----------------------------
T ss_pred             hHHHHHHHHHhcCCCCCCeeeeEEe-eCCEEEEEecccccCHHHHHHhcCC-----------------------------
Confidence            3458999999999999999999776 4678999999999999999985431                             


Q ss_pred             ccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          97 HAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        97 ~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                           .+++.+++.++.||+.|| +|||+..    .+.|++|.+
T Consensus        96 -----~~~~~~~~~~~~qi~~aL-~~LH~~~ivH~Dikp~NIl~  133 (324)
T 3mtl_A           96 -----IINMHNVKLFLFQLLRGL-AYCHRQKVLHRDLKPQNLLI  133 (324)
T ss_dssp             -----CCCHHHHHHHHHHHHHHH-HHHHHTTEEESSCCGGGEEE
T ss_pred             -----CCCHHHHHHHHHHHHHHH-HHHHHCCccCCCcCHHHEEE
Confidence                 588899999999999999 9999764    445888765

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.29  E-value=1.4e-11  Score=101.53  Aligned_cols=90  Identities=12%  Similarity=0.012  Sum_probs=75.2

Q ss_pred             cchHHHHHHHHHHHHhhhCC--CCCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          10 RKETVTEILRLGVKQLEVYR--HPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPP   87 (138)
Q Consensus        10 ~~e~~~e~lrrEi~~L~rLr--HPnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~   87 (138)
                      ..+...+.+++|+.+|.+|+  ||||+++++.+. +.+.+|+|||+..++|.+++....                     
T Consensus        93 ~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~-~~~~~~lv~E~~~~~L~~~l~~~~---------------------  150 (390)
T 2zmd_A           93 ADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEI-TDQYIYMVMECGNIDLNSWLKKKK---------------------  150 (390)
T ss_dssp             CCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEE-CSSEEEEEEECCSEEHHHHHHHCS---------------------
T ss_pred             ccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEe-cCCEEEEEEecCCCCHHHHHHhcC---------------------
Confidence            34566788999999999997  499999999655 567899999977789999998542                     


Q ss_pred             CCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          88 ANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        88 ~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                    .+++.+++.++.||+.|| +|||+..    .+.|++|.+
T Consensus       151 --------------~~~~~~~~~i~~qi~~aL-~~lH~~~ivHrDlkp~NIll  188 (390)
T 2zmd_A          151 --------------SIDPWERKSYWKNMLEAV-HTIHQHGIVHSDLKPANFLI  188 (390)
T ss_dssp             --------------SCCHHHHHHHHHHHHHHH-HHHHTTTCCCCCCCGGGEEE
T ss_pred             --------------CCCHHHHHHHHHHHHHHH-HHHHHCCeeecCCCHHHEEE
Confidence                          578889999999999999 9999864    445888765

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.29  E-value=9.1e-12  Score=98.96  Aligned_cols=85  Identities=16%  Similarity=0.084  Sum_probs=72.9

Q ss_pred             HHHHHHHHHhhhC-CCCCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          16 EILRLGVKQLEVY-RHPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASR   94 (138)
Q Consensus        16 e~lrrEi~~L~rL-rHPnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (138)
                      +.+++|+.+|++| +||||+++++.++ +.+.+++||||+.++|.+++....                            
T Consensus        49 ~~~~~E~~~l~~l~~h~~i~~~~~~~~-~~~~~~lv~e~~~~~L~~~~~~~~----------------------------   99 (330)
T 2izr_A           49 PQLHLEYRFYKQLGSGDGIPQVYYFGP-CGKYNAMVLELLGPSLEDLFDLCD----------------------------   99 (330)
T ss_dssp             CCHHHHHHHHHHHCSCTTSCCEEEEEE-ETTEEEEEEECCCCBHHHHHHHTT----------------------------
T ss_pred             HHHHHHHHHHHHhhCCCCCCEEEEEEe-cCCccEEEEEeCCCCHHHHHHHcC----------------------------
Confidence            3578999999999 9999999999666 477999999999889999998542                            


Q ss_pred             CcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          95 PTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        95 ~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                            ..+++.++..++.||++|| +|||+..    .+.|++|.+
T Consensus       100 ------~~~~~~~~~~i~~qi~~~l-~~LH~~~iiHrDlkp~Nill  138 (330)
T 2izr_A          100 ------RTFSLKTVLMIAIQLISRM-EYVHSKNLIYRDVKPENFLI  138 (330)
T ss_dssp             ------TCCCHHHHHHHHHHHHHHH-HHHHHTTEECCCCCGGGEEE
T ss_pred             ------CCCCHHHHHHHHHHHHHHH-HHHHhCCeeccCCCHHHeee
Confidence                  1589999999999999999 9999864    455888765

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.29  E-value=1.2e-11  Score=98.29  Aligned_cols=75  Identities=17%  Similarity=0.022  Sum_probs=64.4

Q ss_pred             HHHHHHHHHHhhhCCCCCeeEEeceeeecC---CeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVYRHPKILSVLHPIEECP---DALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        15 ~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~---~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      .....+|+.+|.+|+||||+++++.+.+..   ..+++||||+. ++|.+++...                         
T Consensus        62 ~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~-------------------------  116 (322)
T 3soc_A           62 SWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKAN-------------------------  116 (322)
T ss_dssp             HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHHC-------------------------
T ss_pred             HHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEecCCCCCHHHHHHhc-------------------------
Confidence            345577999999999999999999877643   25899999995 6999999742                         


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCC
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVP  126 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~  126 (138)
                                 .+++.+++.++.||++|| +|||+.
T Consensus       117 -----------~~~~~~~~~i~~qi~~al-~~LH~~  140 (322)
T 3soc_A          117 -----------VVSWNELCHIAETMARGL-AYLHED  140 (322)
T ss_dssp             -----------CBCHHHHHHHHHHHHHHH-HHHTCC
T ss_pred             -----------CCCHHHHHHHHHHHHHHH-HHHHhh
Confidence                       488899999999999999 999987

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.29  E-value=5.4e-12  Score=99.73  Aligned_cols=103  Identities=14%  Similarity=0.083  Sum_probs=76.3

Q ss_pred             chHHHHHHHHHHHHhhhC-CCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          11 KETVTEILRLGVKQLEVY-RHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPA   88 (138)
Q Consensus        11 ~e~~~e~lrrEi~~L~rL-rHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (138)
                      .....+.+.+|+.+|.+| +||||+++++.++ +.+.+++||||+. ++|.+++.........                 
T Consensus        89 ~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~-~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~-----------------  150 (333)
T 2i1m_A           89 HADEKEALMSELKIMSHLGQHENIVNLLGACT-HGGPVLVITEYCCYGDLLNFLRRKSRVLET-----------------  150 (333)
T ss_dssp             CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSSCEEEEECCTTEEHHHHHHHHHHHHSC-----------------
T ss_pred             ChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEe-cCCceEEEEecCCCCcHHHHHHHhcccccc-----------------
Confidence            344568899999999999 8999999999776 4678999999995 6999999764321000                 


Q ss_pred             CCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          89 NQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        89 ~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                          ..........+++.++..++.||++|| +|||+..    .+.|++|.+
T Consensus       151 ----~~~~~~~~~~~~~~~~~~~~~qi~~~l-~~lH~~~ivH~Dlkp~NIl~  197 (333)
T 2i1m_A          151 ----DPAFAIANSTASTRDLLHFSSQVAQGM-AFLASKNCIHRDVAARNVLL  197 (333)
T ss_dssp             ----C-------CCCCHHHHHHHHHHHHHHH-HHHHHTTEECSCCSGGGCEE
T ss_pred             ----cccccccccccCHHHHHHHHHHHHHHH-HHHhcCCcccCCcccceEEE
Confidence                000001123589999999999999999 9999864    445888765

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.28  E-value=8.6e-12  Score=99.58  Aligned_cols=85  Identities=16%  Similarity=0.148  Sum_probs=71.9

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ..+.+.+|+.+|++|+||||+++++.+.+ .+.+++||||+. ++|.+++...                           
T Consensus        85 ~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~---------------------------  136 (321)
T 2c30_A           85 RRELLFNEVVIMRDYQHFNVVEMYKSYLV-GEELWVLMEFLQGGALTDIVSQV---------------------------  136 (321)
T ss_dssp             SHHHHHHHHHHHTTCCCTTBCCEEEEEEE-TTEEEEEECCCCSCBHHHHHTTC---------------------------
T ss_pred             HHHHHHHHHHHHHhCCCCCcceEEEEEEE-CCEEEEEEecCCCCCHHHHHHhc---------------------------
Confidence            34678899999999999999999997764 678999999995 6999998621                           


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                               .+++.++..++.||++|| +|||+..    .+.|++|.+
T Consensus       137 ---------~l~~~~~~~i~~qi~~~L-~~LH~~~ivH~Dlkp~NIll  174 (321)
T 2c30_A          137 ---------RLNEEQIATVCEAVLQAL-AYLHAQGVIHRDIKSDSILL  174 (321)
T ss_dssp             ---------CCCHHHHHHHHHHHHHHH-HHHHHTTEECCCCSGGGEEE
T ss_pred             ---------CCCHHHHHHHHHHHHHHH-HHHHHCCeecCCCCHHHEEE
Confidence                     588899999999999999 9999854    445777764

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.28  E-value=1.1e-11  Score=96.76  Aligned_cols=86  Identities=13%  Similarity=0.061  Sum_probs=73.1

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      ...+.+++|+.+|++++||||+++++.+.+ .+.+++||||+. ++|.+++...                          
T Consensus        62 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~--------------------------  114 (303)
T 3a7i_A           62 DEIEDIQQEITVLSQCDSPYVTKYYGSYLK-DTKLWIIMEYLGGGSALDLLEPG--------------------------  114 (303)
T ss_dssp             TTHHHHHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEEEEECCTTEEHHHHHTTS--------------------------
T ss_pred             HHHHHHHHHHHHHHhCCCCCEeEEEEEEec-CCeEEEEEEeCCCCcHHHHHhcC--------------------------
Confidence            346788999999999999999999997765 678999999996 5999998621                          


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                .+++.++..++.||+.|| .|||+..    .+-|++|.+
T Consensus       115 ----------~~~~~~~~~~~~qi~~~l-~~lH~~~i~H~dl~p~Nil~  152 (303)
T 3a7i_A          115 ----------PLDETQIATILREILKGL-DYLHSEKKIHRDIKAANVLL  152 (303)
T ss_dssp             ----------CCCHHHHHHHHHHHHHHH-HHHHHTTEECCCCSGGGEEE
T ss_pred             ----------CCCHHHHHHHHHHHHHHH-HHHHHCCCccCCCChheEEE
Confidence                      588899999999999999 9999854    445887765

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.28  E-value=3.5e-12  Score=100.75  Aligned_cols=91  Identities=12%  Similarity=0.085  Sum_probs=74.1

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      ...+.+++|+.+|++|+||||+++++.++ ..+.+++||||+. ++|.+++......                       
T Consensus        77 ~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~-----------------------  132 (321)
T 2qkw_B           77 QGIEEFETEIETLSFCRHPHLVSLIGFCD-ERNEMILIYKYMENGNLKRHLYGSDLP-----------------------  132 (321)
T ss_dssp             SHHHHHHHHHHGGGSCCCTTBCCEEEECC-CTTCCEEEEECCTTCBTGGGSSSSCCC-----------------------
T ss_pred             HHHHHHHHHHHHHHhCCCCCEeeEEEEEc-CCCeEEEEEEcCCCCcHHHHHhccCCC-----------------------
Confidence            34678899999999999999999999776 4678999999996 6999888643211                       


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                              ...+++.++..++.||++|| +|||+..    .+.|++|.+
T Consensus       133 --------~~~~~~~~~~~i~~~i~~~l-~~lH~~~ivH~dlkp~Nil~  172 (321)
T 2qkw_B          133 --------TMSMSWEQRLEICIGAARGL-HYLHTRAIIHRDVKSINILL  172 (321)
T ss_dssp             --------SCCCCHHHHHHHHHHHHHHH-HHHHHTTEECSCCCSTTEEE
T ss_pred             --------ccccCHHHHHHHHHHHHHHH-HHhcCCCeecCCCCHHHEEE
Confidence                    12588999999999999999 9999854    455888765

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.28  E-value=1.6e-11  Score=96.03  Aligned_cols=86  Identities=10%  Similarity=0.089  Sum_probs=72.9

Q ss_pred             HHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSAS   93 (138)
Q Consensus        15 ~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (138)
                      .+.+.+|+.+|++|+||||+++++.+.+ .+.+++||||+. ++|.+++....                           
T Consensus        68 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~---------------------------  119 (314)
T 3com_A           68 LQEIIKEISIMQQCDSPHVVKYYGSYFK-NTDLWIVMEYCGAGSVSDIIRLRN---------------------------  119 (314)
T ss_dssp             CHHHHHHHHHHHTCCCTTBCCEEEEEEE-TTEEEEEEECCTTEEHHHHHHHHT---------------------------
T ss_pred             HHHHHHHHHHHHhCCCCCCccEEEEEEe-CCEEEEEeecCCCCCHHHHHHhcC---------------------------
Confidence            3667899999999999999999997765 678999999996 59999997432                           


Q ss_pred             CCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          94 RPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        94 ~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                             ..+++.++..++.||++|| .|||+..    .+-|++|.+
T Consensus       120 -------~~~~~~~~~~i~~~i~~~l-~~lH~~~i~H~dl~p~Nil~  158 (314)
T 3com_A          120 -------KTLTEDEIATILQSTLKGL-EYLHFMRKIHRDIKAGNILL  158 (314)
T ss_dssp             -------CCCCHHHHHHHHHHHHHHH-HHHHHTTEECCCCSGGGEEE
T ss_pred             -------CCCCHHHHHHHHHHHHHHH-HHHHhCCCcCCCcCHHHEEE
Confidence                   1588999999999999999 9999754    455888765

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.28  E-value=1.4e-11  Score=96.03  Aligned_cols=90  Identities=20%  Similarity=0.124  Sum_probs=73.3

Q ss_pred             cchHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          10 RKETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPA   88 (138)
Q Consensus        10 ~~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (138)
                      ......+.+++|+.+|++|+||||+++++ +. ..+.+++||||+. ++|.+++....                      
T Consensus        59 ~~~~~~~~~~~E~~~l~~l~h~~iv~~~~-~~-~~~~~~lv~e~~~~~~L~~~l~~~~----------------------  114 (289)
T 3og7_A           59 PTPQQLQAFKNEVGVLRKTRHVNILLFMG-YS-TAPQLAIVTQWCEGSSLYHHLHASE----------------------  114 (289)
T ss_dssp             CCHHHHHHHHHHHHHHTTCCCTTBCCEEE-EE-CSSSCEEEEECCCEEEHHHHHTTC-----------------------
T ss_pred             CCHHHHHHHHHHHHHHHhCCCCcEEEEEe-ec-cCCccEEEEEecCCCcHHHHHhhcc----------------------
Confidence            34566788999999999999999999999 44 3567999999995 79999996432                      


Q ss_pred             CCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          89 NQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        89 ~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                  ..+++.++..++.||+.|| .|||+..    .+.|++|.+
T Consensus       115 ------------~~~~~~~~~~i~~qi~~~L-~~lH~~~i~H~Dlkp~Nil~  153 (289)
T 3og7_A          115 ------------TKFEMKKLIDIARQTARGM-DYLHAKSIIHRDLKSNNIFL  153 (289)
T ss_dssp             --------------CCHHHHHHHHHHHHHHH-HHHHHTTCCCSCCCGGGEEE
T ss_pred             ------------CCCCHHHHHHHHHHHHHHH-HHHHhCCcccccCccceEEE
Confidence                        2588899999999999999 9999754    445888765

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.28  E-value=1.3e-11  Score=97.88  Aligned_cols=90  Identities=14%  Similarity=0.090  Sum_probs=73.5

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeec-CCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEEC-PDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPAN   89 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~-~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (138)
                      +...+.+++|+.+|++|+||||+++++.+.+. .+.+++||||+. ++|.+++....                       
T Consensus        83 ~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-----------------------  139 (326)
T 2w1i_A           83 EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-----------------------  139 (326)
T ss_dssp             SHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCEEEECCCTTCBHHHHHHHST-----------------------
T ss_pred             HHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceEEEEECCCCCCHHHHHHhcc-----------------------
Confidence            45567889999999999999999999976543 347999999995 69999998542                       


Q ss_pred             CCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          90 QSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        90 ~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                 ..+++.++..++.||++|| +|||+..    .+.|++|.+
T Consensus       140 -----------~~~~~~~~~~i~~qi~~aL-~~LH~~~ivH~dikp~NIli  178 (326)
T 2w1i_A          140 -----------ERIDHIKLLQYTSQICKGM-EYLGTKRYIHRDLATRNILV  178 (326)
T ss_dssp             -----------TSSCHHHHHHHHHHHHHHH-HHHHHTTEECSCCCGGGEEE
T ss_pred             -----------cCCCHHHHHHHHHHHHHHH-HHHHhCCEeccCCCcceEEE
Confidence                       1588899999999999999 9999754    455888765

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.28  E-value=8.6e-12  Score=95.57  Aligned_cols=86  Identities=14%  Similarity=0.070  Sum_probs=70.4

Q ss_pred             HHHHHHHHhhhCCCCCeeEEeceeee---------------cCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCC
Q psy3822          17 ILRLGVKQLEVYRHPKILSVLHPIEE---------------CPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGG   80 (138)
Q Consensus        17 ~lrrEi~~L~rLrHPnIL~l~e~~ee---------------~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~   80 (138)
                      .+++|+.+|.+|+||||+++++.++.               ..+.+++||||+. ++|.+++.....             
T Consensus        50 ~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-------------  116 (284)
T 2a19_B           50 KAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRG-------------  116 (284)
T ss_dssp             GGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---------CCEEEEEEEEECCCCSCBHHHHHHHGGG-------------
T ss_pred             HHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccccccccCcceEEEEEeccCCCCHHHHHhhccC-------------
Confidence            46799999999999999999997653               1346999999997 599999985421             


Q ss_pred             CCCCCCCCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          81 SGSSPPPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                          ..+++.++..++.||+.|| .|||+..    .+.|++|.+
T Consensus       117 --------------------~~~~~~~~~~i~~qi~~~l-~~lH~~~i~H~dlkp~Nil~  155 (284)
T 2a19_B          117 --------------------EKLDKVLALELFEQITKGV-DYIHSKKLINRDLKPSNIFL  155 (284)
T ss_dssp             --------------------SCCCHHHHHHHHHHHHHHH-HHHHHTTEECSCCSGGGEEE
T ss_pred             --------------------CCCCHHHHHHHHHHHHHHH-HHHHhCCeeeccCCHHHEEE
Confidence                                2588999999999999999 9999754    445888765

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.27  E-value=2.6e-12  Score=99.20  Aligned_cols=89  Identities=17%  Similarity=0.079  Sum_probs=71.6

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ..+.+.+|+.+|++|+||||+++++.+.+..+.+++||||+. ++|.+++.....                         
T Consensus        57 ~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-------------------------  111 (278)
T 1byg_A           57 TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR-------------------------  111 (278)
T ss_dssp             --HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTEEHHHHHHHHHH-------------------------
T ss_pred             HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecCCCCCHHHHHHhccc-------------------------
Confidence            457789999999999999999999976655568999999996 599999975431                         


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                              ..+++.++..++.||++|| +|||+..    .+.|++|.+
T Consensus       112 --------~~~~~~~~~~~~~~i~~~l-~~lH~~~i~H~dlkp~Nil~  150 (278)
T 1byg_A          112 --------SVLGGDCLLKFSLDVCEAM-EYLEGNNFVHRDLAARNVLV  150 (278)
T ss_dssp             --------HHCCHHHHHHHHHHHHHHH-HHHHHTTCCCSCCSGGGEEE
T ss_pred             --------ccCCHHHHHHHHHHHHHHH-HHHHhCCccccCCCcceEEE
Confidence                    1378899999999999999 9999754    445888765

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.27  E-value=6.6e-12  Score=103.01  Aligned_cols=94  Identities=13%  Similarity=0.129  Sum_probs=73.0

Q ss_pred             HHHHHHHHHhhhCCCCCeeEEeceeee-cCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          16 EILRLGVKQLEVYRHPKILSVLHPIEE-CPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASR   94 (138)
Q Consensus        16 e~lrrEi~~L~rLrHPnIL~l~e~~ee-~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (138)
                      +.+.+|+.+|++|+||||+++++.+.+ +...+++||||+.++|.+++.......                         
T Consensus        63 ~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~-------------------------  117 (405)
T 3rgf_A           63 MSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASK-------------------------  117 (405)
T ss_dssp             HHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEECCSEEHHHHHHHHHHHC-------------------------
T ss_pred             HHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCCCCCHHHHHHHhcccc-------------------------
Confidence            457899999999999999999998754 356899999999999999997543110                         


Q ss_pred             CcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          95 PTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        95 ~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                       ...+...+++.+++.++.||+.|| .|||+..    .+.|++|.+
T Consensus       118 -~~~~~~~l~~~~~~~i~~qi~~al-~~LH~~~ivH~Dlkp~NIll  161 (405)
T 3rgf_A          118 -ANKKPVQLPRGMVKSLLYQILDGI-HYLHANWVLHRDLKPANILV  161 (405)
T ss_dssp             --------CCHHHHHHHHHHHHHHH-HHHHHTTCCCCCCCGGGEEE
T ss_pred             -ccccccCCCHHHHHHHHHHHHHHH-HHHHhCCEeCCCcCHHHeEE
Confidence             001122599999999999999999 9999754    455888876

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.27  E-value=1.4e-11  Score=100.77  Aligned_cols=86  Identities=19%  Similarity=0.194  Sum_probs=73.3

Q ss_pred             HHHHHHHHHHHhhhC-CCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVY-RHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        14 ~~e~lrrEi~~L~rL-rHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      ..+.+.+|+.+|.++ .||||+++++.++ +.+.+|+||||+. ++|.+++....                         
T Consensus        66 ~~~~~~~E~~il~~~~~hp~Iv~l~~~~~-~~~~~~lv~E~~~gg~L~~~l~~~~-------------------------  119 (353)
T 3txo_A           66 DVECTMTEKRILSLARNHPFLTQLFCCFQ-TPDRLFFVMEFVNGGDLMFHIQKSR-------------------------  119 (353)
T ss_dssp             THHHHHHHHHHHHHTTTCTTBCCEEEEEE-CSSEEEEEEECCCSCBHHHHHHHHS-------------------------
T ss_pred             HHHHHHHHHHHHHhccCCCceeeEEEEEE-eCCEEEEEEeCCCCCcHHHHHHHcC-------------------------
Confidence            456788999999998 6999999999776 5779999999996 69999998543                         


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                .+++.+++.++.||+.|| +|||+..    .+.|++|.+
T Consensus       120 ----------~~~~~~~~~~~~qi~~aL-~~LH~~givHrDlkp~NILl  157 (353)
T 3txo_A          120 ----------RFDEARARFYAAEIISAL-MFLHDKGIIYRDLKLDNVLL  157 (353)
T ss_dssp             ----------SCCHHHHHHHHHHHHHHH-HHHHHTTCBCCCCCGGGEEE
T ss_pred             ----------CCCHHHHHHHHHHHHHHH-HHHHHCCCcccCCCHHHEEE
Confidence                      589999999999999999 9999864    445888765

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.27  E-value=1.2e-11  Score=100.60  Aligned_cols=82  Identities=18%  Similarity=0.241  Sum_probs=69.7

Q ss_pred             HHHHHHHhhhC-CCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          18 LRLGVKQLEVY-RHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASRP   95 (138)
Q Consensus        18 lrrEi~~L~rL-rHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   95 (138)
                      ..+|+.+|.++ +||||+++++.++ +.+.+|+||||+. ++|.+.+....                             
T Consensus        62 ~~~E~~~l~~~~~hp~iv~~~~~~~-~~~~~~lv~E~~~gg~L~~~i~~~~-----------------------------  111 (342)
T 2qr7_A           62 PTEEIEILLRYGQHPNIITLKDVYD-DGKYVYVVTELMKGGELLDKILRQK-----------------------------  111 (342)
T ss_dssp             CHHHHHHHHHHTTSTTBCCEEEEEE-CSSEEEEEECCCCSCBHHHHHHTCT-----------------------------
T ss_pred             hHHHHHHHHHhcCCCCcCeEEEEEE-cCCEEEEEEeCCCCCcHHHHHHHcC-----------------------------
Confidence            36789999988 7999999999776 5789999999995 69999997432                             


Q ss_pred             cccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          96 THAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        96 ~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                            .+++.+++.++.||++|| +|||+..    .+.|++|.+
T Consensus       112 ------~~~~~~~~~~~~qi~~al-~~lH~~givHrDlkp~NIl~  149 (342)
T 2qr7_A          112 ------FFSEREASAVLFTITKTV-EYLHAQGVVHRDLKPSNILY  149 (342)
T ss_dssp             ------TCCHHHHHHHHHHHHHHH-HHHHHTTEECSCCCGGGEEE
T ss_pred             ------CCCHHHHHHHHHHHHHHH-HHHHHCCcEeccCCHHHEEE
Confidence                  589999999999999999 9999864    556888875

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.27  E-value=6.8e-12  Score=99.36  Aligned_cols=118  Identities=17%  Similarity=0.131  Sum_probs=75.9

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccc-cccHHHHHhhcCCCCCCCCCCCCCC---CCCCCCC--
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPV-YASLASILAFQESPAPNHSTNPVTG---GSGSSPP--   86 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V-~~sL~~~L~~~~~~~~~~~~~~~~~---~~~~~~~--   86 (138)
                      ...+.+++|+.+|++|+||||+++++.++ +.+.+++||||+ .++|.+++.......    .+....   .....+.  
T Consensus        70 ~~~~~~~~E~~~l~~l~hpniv~~~~~~~-~~~~~~lv~e~~~gg~L~~~l~~~~~~~----~~~~~~~~~~~~~~~~~~  144 (345)
T 3hko_A           70 KDVERIKTEVRLMKKLHHPNIARLYEVYE-DEQYICLVMELCHGGHLLDKLNVFIDDS----TGKCAMDVVKTQICPCPE  144 (345)
T ss_dssp             CHHHHHHHHHHHHHHCCCTTBCCEEEEEE-CSSEEEEEEECCCSCBHHHHEEEEEETT----TTEEEEEEECCCCCCSHH
T ss_pred             HHHHHHHHHHHHHHhCCCCCcceeehhhc-cCCeEEEEEeCCCCCcHHHHHHHhhccc----cccccccccccccccccc
Confidence            34578899999999999999999999776 477999999999 479999996322110    000000   0000000  


Q ss_pred             ----CCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          87 ----PANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        87 ----~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                          ..+++-..........+++.+++.++.||++|| +|||+..    .+.|++|.+
T Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l-~~LH~~~ivH~Dlkp~NIll  201 (345)
T 3hko_A          145 CNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSAL-HYLHNQGICHRDIKPENFLF  201 (345)
T ss_dssp             HHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHH-HHHHHTTEECCCCCGGGEEE
T ss_pred             ccccccccccccccccccccccHHHHHHHHHHHHHHH-HHHHHCCccccCCChhhEEE
Confidence                000000000011123578899999999999999 9999864    455888765

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.26  E-value=1.7e-11  Score=96.16  Aligned_cols=98  Identities=7%  Similarity=-0.019  Sum_probs=74.6

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      ....+.+.+|+.+|++|+||||+++++.+. +.+.+++||||+. ++|.+++........                    
T Consensus        69 ~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~--------------------  127 (322)
T 1p4o_A           69 MRERIEFLNEASVMKEFNCHHVVRLLGVVS-QGQPTLVIMELMTRGDLKSYLRSLRPAMA--------------------  127 (322)
T ss_dssp             HHHHHHHHHHHHHGGGCCCTTBCCEEEEEC-SSSSCEEEEECCTTCBHHHHHHHHHHHHH--------------------
T ss_pred             HHHHHHHHHHHHHHHhcCCCCEeeeEEEEc-cCCccEEEEEeCCCCcHHHHHHHhchhhc--------------------
Confidence            344567899999999999999999999775 4678999999996 699999975421000                    


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                           .......+++.++..++.||+.|| +|||+..    .+.|++|.+
T Consensus       128 -----~~~~~~~~~~~~~~~i~~qi~~~l-~~lH~~~i~H~dikp~NIli  171 (322)
T 1p4o_A          128 -----NNPVLAPPSLSKMIQMAGEIADGM-AYLNANKFVHRDLAARNCMV  171 (322)
T ss_dssp             -----HCTTCCCCCHHHHHHHHHHHHHHH-HHHHHTTCBCSCCSGGGEEE
T ss_pred             -----cCCCCCCcCHHHHHHHHHHHHHHH-HHHHHCCCccCCCccceEEE
Confidence                 000012578899999999999999 9999864    445888765

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.26  E-value=1.1e-11  Score=108.54  Aligned_cols=88  Identities=16%  Similarity=0.130  Sum_probs=72.9

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      ....+.+.+|+.+|++|+||||+++++.+++  +.+++||||+. ++|.++|....                        
T Consensus       377 ~~~~~~~~~E~~il~~l~hpniv~l~~~~~~--~~~~lv~E~~~~g~L~~~l~~~~------------------------  430 (613)
T 2ozo_A          377 KADTEEMMREAQIMHQLDNPYIVRLIGVCQA--EALMLVMEMAGGGPLHKFLVGKR------------------------  430 (613)
T ss_dssp             STTHHHHHHHHHHHTTCCCTTBCCEEEEEES--SSEEEEEECCTTCBHHHHHTTCT------------------------
T ss_pred             hHHHHHHHHHHHHHHhCCCCCEeeEEEEecc--CCeEEEEEeCCCCcHHHHHhhcc------------------------
Confidence            3455778999999999999999999997753  56999999995 69999997432                        


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                ..+++.++..++.||++|| +|||+..    .+.|++|.+
T Consensus       431 ----------~~l~~~~~~~i~~qi~~~L-~~LH~~~iiHrDlkp~NILl  469 (613)
T 2ozo_A          431 ----------EEIPVSNVAELLHQVSMGM-KYLEEKNFVHRNLAARNVLL  469 (613)
T ss_dssp             ----------TTSCHHHHHHHHHHHHHHH-HHHHHTTCCCSCCSGGGEEE
T ss_pred             ----------CCCCHHHHHHHHHHHHHHH-HHHHHCCEEcCcCCHHHEEE
Confidence                      1588999999999999999 9999854    445777764

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.26  E-value=1.7e-11  Score=95.99  Aligned_cols=93  Identities=9%  Similarity=0.061  Sum_probs=75.3

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeee---cCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEE---CPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPP   87 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee---~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~   87 (138)
                      ....+.+++|+.+|++|+||||+++++.+..   ..+.+++||||+. ++|.+++......                   
T Consensus        67 ~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~-------------------  127 (317)
T 2buj_A           67 QQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDK-------------------  127 (317)
T ss_dssp             HHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEEEECCTTCBHHHHHHHHHTT-------------------
T ss_pred             HHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEEEEeCCCCcHHHHHHHHHhc-------------------
Confidence            3456788999999999999999999997753   2348999999996 5999999864211                   


Q ss_pred             CCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          88 ANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        88 ~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                  ...+++.++..++.||++|| .|||+..    .+.|++|.+
T Consensus       128 ------------~~~~~~~~~~~i~~qi~~~L-~~LH~~~ivH~dlkp~NIl~  167 (317)
T 2buj_A          128 ------------GNFLTEDQILWLLLGICRGL-EAIHAKGYAHRDLKPTNILL  167 (317)
T ss_dssp             ------------TCCCCHHHHHHHHHHHHHHH-HHHHHTTEECCCCCGGGEEE
T ss_pred             ------------CCCCCHHHHHHHHHHHHHHH-HHHHhCCcccCCCCHHHEEE
Confidence                        12689999999999999999 9999864    445888765

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.26  E-value=1.5e-11  Score=94.82  Aligned_cols=88  Identities=17%  Similarity=0.170  Sum_probs=73.8

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      +...+.+.+|+..|++|+||||+++++.+.+ . .+++||||+. ++|.+++....                        
T Consensus        62 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~-~~~~v~e~~~~~~L~~~l~~~~------------------------  115 (291)
T 1u46_A           62 PEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-P-PMKMVTELAPLGSLLDRLRKHQ------------------------  115 (291)
T ss_dssp             CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-S-SCEEEEECCTTCBHHHHHHHHG------------------------
T ss_pred             HHHHHHHHHHHHHHHhCCCCCcccEEEEEcc-C-CceeeEecccCCCHHHHHHhcc------------------------
Confidence            4567889999999999999999999997764 3 4999999996 79999998542                        


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                ..+++.++..++.||++|| .|||+..    .+.|++|.+
T Consensus       116 ----------~~~~~~~~~~~~~~i~~~l-~~lH~~~i~H~dikp~Nili  154 (291)
T 1u46_A          116 ----------GHFLLGTLSRYAVQVAEGM-GYLESKRFIHRDLAARNLLL  154 (291)
T ss_dssp             ----------GGSCHHHHHHHHHHHHHHH-HHHHHTTEECSCCCGGGEEE
T ss_pred             ----------CCcCHHHHHHHHHHHHHHH-HHHHhCCcccCCCchheEEE
Confidence                      1588899999999999999 9999864    445888765

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.26  E-value=1.2e-11  Score=95.28  Aligned_cols=94  Identities=10%  Similarity=-0.041  Sum_probs=74.8

Q ss_pred             cchHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          10 RKETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPAN   89 (138)
Q Consensus        10 ~~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (138)
                      ..+...+.++++...++.++||||+++++.++ +.+.+++||||+.++|.+++......                     
T Consensus        45 ~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~-~~~~~~lv~e~~~~~l~~~l~~~~~~---------------------  102 (290)
T 3fme_A           45 NSQEQKRLLMDLDISMRTVDCPFTVTFYGALF-REGDVWICMELMDTSLDKFYKQVIDK---------------------  102 (290)
T ss_dssp             CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEE-CSSSEEEEEECCSEEHHHHHHHHHHT---------------------
T ss_pred             CcHHHHHHHHHHHHHHHhCCCCeEEEEeeeee-ccCCEEEEEehhccchHHHHHHHHhc---------------------
Confidence            34455667777777889999999999999776 46789999999999999988753211                     


Q ss_pred             CCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC-----CcccCccee
Q psy3822          90 QSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS-----TYLPSSVAF  136 (138)
Q Consensus        90 ~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a-----~~~~~~~~~  136 (138)
                                ...+++.+++.++.||+.|| +|||+..     .+.|++|.+
T Consensus       103 ----------~~~~~~~~~~~i~~qi~~~l-~~lH~~~~i~H~dlkp~Nil~  143 (290)
T 3fme_A          103 ----------GQTIPEDILGKIAVSIVKAL-EHLHSKLSVIHRDVKPSNVLI  143 (290)
T ss_dssp             ----------TCCCCHHHHHHHHHHHHHHH-HHHHHHSCCCCCCCSGGGCEE
T ss_pred             ----------CCCCCHHHHHHHHHHHHHHH-HHHhhcCCeecCCCCHHHEEE
Confidence                      12689999999999999999 9999863     344888765

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.26  E-value=1.4e-11  Score=104.83  Aligned_cols=87  Identities=15%  Similarity=0.152  Sum_probs=73.0

Q ss_pred             HHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSAS   93 (138)
Q Consensus        15 ~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (138)
                      .+.+.+|+.+|++|+||||+++++.+. ..+.+++||||+. ++|.++|.....                          
T Consensus       260 ~~~~~~E~~~l~~l~hpniv~l~~~~~-~~~~~~lv~E~~~~g~L~~~l~~~~~--------------------------  312 (495)
T 1opk_A          260 VEEFLKEAAVMKEIKHPNLVQLLGVCT-REPPFYIITEFMTYGNLLDYLRECNR--------------------------  312 (495)
T ss_dssp             HHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSSCEEEEECCTTCBHHHHHHHSCT--------------------------
T ss_pred             hHHHHHHHHHHHhcCCCCEeeEEEEEe-cCCcEEEEEEccCCCCHHHHHHhcCc--------------------------
Confidence            467899999999999999999999776 4678999999996 799999985431                          


Q ss_pred             CCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          94 RPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        94 ~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                             ..+++.++..++.||++|| +|||+..    .+.|++|.+
T Consensus       313 -------~~~~~~~~~~i~~qi~~~L-~~LH~~~ivHrDlkp~NIll  351 (495)
T 1opk_A          313 -------QEVSAVVLLYMATQISSAM-EYLEKKNFIHRNLAARNCLV  351 (495)
T ss_dssp             -------TTSCHHHHHHHHHHHHHHH-HHHHHTTEECSCCSGGGEEE
T ss_pred             -------CCCCHHHHHHHHHHHHHHH-HHHHhCCcccCCCChhhEEE
Confidence                   1588899999999999999 9999854    445777764

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.26  E-value=9e-12  Score=98.46  Aligned_cols=85  Identities=14%  Similarity=0.117  Sum_probs=69.0

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ....+++|+.+|++|+||||+++++.++. . .+++||||+. ++|.+++....                          
T Consensus        58 ~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~-~~~lv~e~~~~~~L~~~~~~~~--------------------------  109 (322)
T 2ycf_A           58 PALNVETEIEILKKLNHPCIIKIKNFFDA-E-DYYIVLELMEGGELFDKVVGNK--------------------------  109 (322)
T ss_dssp             ---CHHHHHHHHHHCCCTTBCCEEEEEES-S-SEEEEEECCTTEETHHHHSTTC--------------------------
T ss_pred             hhhhHHHHHHHHHhCCCCCCceEeeEEcC-C-ceEEEEecCCCCcHHHHHhccC--------------------------
Confidence            34567899999999999999999997653 3 4999999995 69999886321                          


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                               .+++.+++.++.||++|| +|||+..    .+.|++|.+
T Consensus       110 ---------~~~~~~~~~~~~qi~~~l-~~lH~~~ivH~dlkp~NIl~  147 (322)
T 2ycf_A          110 ---------RLKEATCKLYFYQMLLAV-QYLHENGIIHRDLKPENVLL  147 (322)
T ss_dssp             ---------CCCHHHHHHHHHHHHHHH-HHHHHTTEECCCCSGGGEEE
T ss_pred             ---------CCCHHHHHHHHHHHHHHH-HHHHHCCeeccCCCHHHEEE
Confidence                     588999999999999999 9999754    445888765

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.26  E-value=2.8e-11  Score=94.71  Aligned_cols=92  Identities=12%  Similarity=0.096  Sum_probs=75.5

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      ....+.+.+|+..|++|+||||+++++.+.+ .+.+++||||+. ++|.+++......                      
T Consensus        73 ~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~----------------------  129 (310)
T 2wqm_A           73 AKARADCIKEIDLLKQLNHPNVIKYYASFIE-DNELNIVLELADAGDLSRMIKHFKKQ----------------------  129 (310)
T ss_dssp             HHHHHHHHHHHHHHHTCCCTTBCCEEEEEEE-TTEEEEEEECCCSCBHHHHHHHHHHT----------------------
T ss_pred             HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEc-CCcEEEEEecCCCCCHHHHHHHhccc----------------------
Confidence            4556788999999999999999999997775 678999999996 5999999753211                      


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                               ...+++.++..++.||++|| .|||+..    .+.|++|.+
T Consensus       130 ---------~~~~~~~~~~~i~~qi~~~l-~~LH~~~i~H~dl~p~NIl~  169 (310)
T 2wqm_A          130 ---------KRLIPERTVWKYFVQLCSAL-EHMHSRRVMHRDIKPANVFI  169 (310)
T ss_dssp             ---------TCCCCHHHHHHHHHHHHHHH-HHHHHTTCCCCCCCGGGEEE
T ss_pred             ---------ccCCCHHHHHHHHHHHHHHH-HHHhhCCeeCCCCcHHHEEE
Confidence                     12588999999999999999 9999764    445877765

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.26  E-value=1.6e-11  Score=97.79  Aligned_cols=87  Identities=9%  Similarity=0.024  Sum_probs=71.7

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      ...+.+.+|+.+|++|+||||+++++.+.+  +..+++||++. ++|.+++....                         
T Consensus        59 ~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~v~e~~~~g~L~~~l~~~~-------------------------  111 (327)
T 3poz_A           59 KANKEILDEAYVMASVDNPHVCRLLGICLT--STVQLITQLMPFGCLLDYVREHK-------------------------  111 (327)
T ss_dssp             -CHHHHHHHHHHHHHCCBTTBCCEEEEEES--SSEEEEEECCTTCBHHHHHHHST-------------------------
T ss_pred             HHHHHHHHHHHHHHhCCCCCEeEEEEEEec--CCeEEEEEecCCCcHHHHHHhcC-------------------------
Confidence            445778999999999999999999997764  34889999984 79999998543                         


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                               ..+++.++..++.||+.|| +|||+..    .+.|++|.+
T Consensus       112 ---------~~~~~~~~~~~~~qi~~~l-~~LH~~~ivH~Dikp~NIll  150 (327)
T 3poz_A          112 ---------DNIGSQYLLNWCVQIAKGM-NYLEDRRLVHRDLAARNVLV  150 (327)
T ss_dssp             ---------TSCCHHHHHHHHHHHHHHH-HHHHHTTCCCSCCCGGGEEE
T ss_pred             ---------CCCCHHHHHHHHHHHHHHH-HHHhhCCeeCCCCChheEEE
Confidence                     1588899999999999999 9999764    445888765

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.25  E-value=5.4e-12  Score=105.13  Aligned_cols=86  Identities=17%  Similarity=0.150  Sum_probs=65.1

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ..+.+.+|+.+|++++||||+++++.+++ .+.+++||||+. ++|.+++....                          
T Consensus       191 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~--------------------------  243 (446)
T 4ejn_A          191 EVAHTLTENRVLQNSRHPFLTALKYSFQT-HDRLCFVMEYANGGELFFHLSRER--------------------------  243 (446)
T ss_dssp             ----------CCCCCSCTTSCCEEEEEEE-TTEEEEEECCCSSCBHHHHHHHHS--------------------------
T ss_pred             HHHHHHHHHHHHHhCCCCeEeeEEEEEee-CCEEEEEEeeCCCCcHHHHHHhcC--------------------------
Confidence            34667899999999999999999998774 678999999995 69999997542                          


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC-----CcccCccee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS-----TYLPSSVAF  136 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a-----~~~~~~~~~  136 (138)
                               .+++.+++.++.||+.|| +|||+..     .+.|++|.+
T Consensus       244 ---------~~~~~~~~~~~~qi~~aL-~~LH~~~giiHrDlkp~NIll  282 (446)
T 4ejn_A          244 ---------VFSEDRARFYGAEIVSAL-DYLHSEKNVVYRDLKLENLML  282 (446)
T ss_dssp             ---------CCCHHHHHHHHHHHHHHH-HHHHHHTCCCCCCCCGGGEEE
T ss_pred             ---------CCCHHHHHHHHHHHHHHH-HHHhhcCCEEECCCCHHHEEE
Confidence                     588999999999999999 9999733     445888765

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.25  E-value=1.8e-11  Score=102.91  Aligned_cols=83  Identities=8%  Similarity=0.056  Sum_probs=71.4

Q ss_pred             HHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccc-cccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          16 EILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPV-YASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASR   94 (138)
Q Consensus        16 e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V-~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (138)
                      +.+++|+.+|++++||||+++++.++ +.+.+|+||||+ .++|.+++...                             
T Consensus       114 ~~~~~E~~il~~l~hp~Iv~l~~~~~-~~~~~~lV~E~~~gg~L~~~l~~~-----------------------------  163 (410)
T 3v8s_A          114 AFFWEERDIMAFANSPWVVQLFYAFQ-DDRYLYMVMEYMPGGDLVNLMSNY-----------------------------  163 (410)
T ss_dssp             STHHHHHHHHHHCCCTTBCCEEEEEE-CSSEEEEEECCCTTEEHHHHHHHC-----------------------------
T ss_pred             HHHHHHHHHHHhCCCCCCCeEEEEEE-ECCEEEEEEeCCCCCcHHHHHHcC-----------------------------
Confidence            34789999999999999999999877 477999999999 57999999732                             


Q ss_pred             CcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          95 PTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        95 ~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                             .++|.+++.++.||+.|| +|||+..    .+.|++|.+
T Consensus       164 -------~~~e~~~~~~~~qi~~aL-~~LH~~givHrDLKp~NILl  201 (410)
T 3v8s_A          164 -------DVPEKWARFYTAEVVLAL-DAIHSMGFIHRDVKPDNMLL  201 (410)
T ss_dssp             -------CCCHHHHHHHHHHHHHHH-HHHHHTTEECCCCSGGGEEE
T ss_pred             -------CCCHHHHHHHHHHHHHHH-HHHHHCCeEeccCCHHHeeE
Confidence                   488999999999999999 9999854    455888765

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.25  E-value=2e-11  Score=99.79  Aligned_cols=85  Identities=13%  Similarity=0.133  Sum_probs=72.3

Q ss_pred             HHHHHHHHHHhhhC-CCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVY-RHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        15 ~e~lrrEi~~L~rL-rHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      .+.+.+|..+|.++ +||||+++++.++ +.+.+|+||||+. ++|.+++....                          
T Consensus        61 ~~~~~~E~~il~~~~~hp~iv~l~~~~~-~~~~~~lv~E~~~gg~L~~~l~~~~--------------------------  113 (345)
T 1xjd_A           61 VECTMVEKRVLSLAWEHPFLTHMFCTFQ-TKENLFFVMEYLNGGDLMYHIQSCH--------------------------  113 (345)
T ss_dssp             HHHHHHHHHHHHHHTTCTTBCCEEEEEE-CSSEEEEEEECCTTCBHHHHHHHHS--------------------------
T ss_pred             HHHHHHHHHHHHhcCCCCCCCcEEEEEE-eCCEEEEEEeCCCCCcHHHHHHHcC--------------------------
Confidence            46778999999886 9999999999776 5779999999995 69999998543                          


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                               .+++.+++.++.||+.|| +|||+..    .+.|++|.+
T Consensus       114 ---------~~~~~~~~~~~~qi~~aL-~~LH~~~ivHrDlkp~NIll  151 (345)
T 1xjd_A          114 ---------KFDLSRATFYAAEIILGL-QFLHSKGIVYRDLKLDNILL  151 (345)
T ss_dssp             ---------SCCHHHHHHHHHHHHHHH-HHHHHTTCBCCCCCGGGEEE
T ss_pred             ---------CCCHHHHHHHHHHHHHHH-HHHHHCCeEeCCCChhhEEE
Confidence                     588999999999999999 9999864    445887764

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.25  E-value=3.5e-11  Score=96.25  Aligned_cols=90  Identities=18%  Similarity=0.172  Sum_probs=75.8

Q ss_pred             hHHHHHHHHHHHHhhhCC-----CCCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYR-----HPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPP   86 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLr-----HPnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~   86 (138)
                      ....+..++|+.+|++|+     ||||+++++.+.+ .+.+++||||+.++|.+++.....                   
T Consensus        72 ~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~-~~~~~lv~e~~~~~L~~~~~~~~~-------------------  131 (360)
T 3llt_A           72 KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMY-YDHMCLIFEPLGPSLYEIITRNNY-------------------  131 (360)
T ss_dssp             HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEE-TTEEEEEECCCCCBHHHHHHHTTT-------------------
T ss_pred             hhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeE-CCeeEEEEcCCCCCHHHHHHhcCC-------------------
Confidence            345577789999999997     9999999997764 679999999998899999985431                   


Q ss_pred             CCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          87 PANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        87 ~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                    ..+++.+++.++.||+.|| +|||+..    .+.|++|.+
T Consensus       132 --------------~~~~~~~~~~i~~qi~~aL-~~LH~~~ivHrDlkp~NIll  170 (360)
T 3llt_A          132 --------------NGFHIEDIKLYCIEILKAL-NYLRKMSLTHTDLKPENILL  170 (360)
T ss_dssp             --------------CCCCHHHHHHHHHHHHHHH-HHHHHTTEECSCCSGGGEEE
T ss_pred             --------------CCCCHHHHHHHHHHHHHHH-HHHHHCCeeeCCCCcccEEE
Confidence                          1488899999999999999 9999754    556888876

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.25  E-value=2.4e-11  Score=95.21  Aligned_cols=87  Identities=15%  Similarity=0.107  Sum_probs=70.9

Q ss_pred             HHHHHHHHHhhhCC---CCCeeEEeceeeecCC----eEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          16 EILRLGVKQLEVYR---HPKILSVLHPIEECPD----ALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPA   88 (138)
Q Consensus        16 e~lrrEi~~L~rLr---HPnIL~l~e~~ee~~~----~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (138)
                      ..+.+|+..|++|+   ||||+++++.+.+...    .+++|||++.++|.+++.....                     
T Consensus        56 ~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~---------------------  114 (308)
T 3g33_A           56 ISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPP---------------------  114 (308)
T ss_dssp             HHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCSSSEEEEEEEEECCCCBHHHHHHTCCT---------------------
T ss_pred             hhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCCCCceeEEEEehhhhcCHHHHHhhccC---------------------
Confidence            45678888887775   9999999998775433    6999999999999999985431                     


Q ss_pred             CCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          89 NQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        89 ~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                  ..+++.+++.++.||++|| +|||+..    .+.|++|.+
T Consensus       115 ------------~~~~~~~~~~i~~qi~~al-~~lH~~~ivH~Dlkp~Nil~  153 (308)
T 3g33_A          115 ------------PGLPAETIKDLMRQFLRGL-DFLHANCIVHRDLKPENILV  153 (308)
T ss_dssp             ------------TCSCHHHHHHHHHHHHHHH-HHHHHTTCCCSCCCTTTEEE
T ss_pred             ------------CCCCHHHHHHHHHHHHHHH-HHHHHCCcccCCCCHHHEEE
Confidence                        1489999999999999999 9999865    445888765

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.25  E-value=1.6e-11  Score=108.33  Aligned_cols=87  Identities=18%  Similarity=0.191  Sum_probs=73.0

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      ....+.+.+|+.+|++|+||||+++++.++  .+.+++||||+. ++|.++|....                        
T Consensus       411 ~~~~~~~~~E~~il~~l~hpnIv~l~~~~~--~~~~~lv~E~~~~g~L~~~l~~~~------------------------  464 (635)
T 4fl3_A          411 PALKDELLAEANVMQQLDNPYIVRMIGICE--AESWMLVMEMAELGPLNKYLQQNR------------------------  464 (635)
T ss_dssp             GGGHHHHHHHHHHHHHCCCTTBCCEEEEEE--SSSEEEEEECCTTEEHHHHHHHCT------------------------
T ss_pred             HHHHHHHHHHHHHHHhCCCCCEeeEEEEEe--cCCEEEEEEccCCCCHHHHHhhCC------------------------
Confidence            345678899999999999999999999664  356899999995 79999997432                        


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                 .+++.++..++.||++|| +|||+..    .+.|++|.+
T Consensus       465 -----------~l~~~~~~~i~~qi~~~L-~yLH~~~iiHrDLkp~NILl  502 (635)
T 4fl3_A          465 -----------HVKDKNIIELVHQVSMGM-KYLEESNFVHRDLAARNVLL  502 (635)
T ss_dssp             -----------TCCHHHHHHHHHHHHHHH-HHHHHTTCCCSCCSGGGEEE
T ss_pred             -----------CCCHHHHHHHHHHHHHHH-HHHHHCCEeCCCCChHhEEE
Confidence                       588899999999999999 9999764    445888765

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.24  E-value=1.4e-11  Score=98.93  Aligned_cols=83  Identities=7%  Similarity=-0.137  Sum_probs=70.7

Q ss_pred             HHHHHHHhhhCCCCCeeEEeceeeec---CCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          18 LRLGVKQLEVYRHPKILSVLHPIEEC---PDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASR   94 (138)
Q Consensus        18 lrrEi~~L~rLrHPnIL~l~e~~ee~---~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (138)
                      +.+|+..+.+++||||+++++.+.+.   .+.+++||||+.++|.+++....                            
T Consensus        95 ~~~e~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~----------------------------  146 (345)
T 2v62_A           95 CIKKWIERKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERLGIDLQKISGQNG----------------------------  146 (345)
T ss_dssp             HHHHHHHHHTCSCCCCCCEEEEEEEESSSCEEEEEEEECEEEEHHHHCBGGG----------------------------
T ss_pred             HHHHHHhhccccccCcceeecccccccCCCcEEEEEEeccCCCHHHHHHhcC----------------------------
Confidence            56889999999999999999977653   56899999999889999987432                            


Q ss_pred             CcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          95 PTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        95 ~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                             .+++.++..++.||++|| +|||+..    .+.|++|.+
T Consensus       147 -------~~~~~~~~~i~~qi~~aL-~~LH~~~ivH~Dlkp~NIll  184 (345)
T 2v62_A          147 -------TFKKSTVLQLGIRMLDVL-EYIHENEYVHGDIKAANLLL  184 (345)
T ss_dssp             -------BCCHHHHHHHHHHHHHHH-HHHHHTTEECSCCSGGGEEE
T ss_pred             -------CCCHHHHHHHHHHHHHHH-HHHHhCCeeCCCcCHHHEEE
Confidence                   588999999999999999 9999864    445888775

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.24  E-value=2e-11  Score=96.01  Aligned_cols=95  Identities=7%  Similarity=0.046  Sum_probs=73.8

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCC-----eEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEECPD-----ALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSP   85 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~-----~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~   85 (138)
                      +...+.+.+|+.+|++|+||||+++++.+.+...     .+++||||+. ++|.+++.......                
T Consensus        66 ~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~----------------  129 (323)
T 3qup_A           66 SSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGE----------------  129 (323)
T ss_dssp             CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-------CEEEEEECCTTCBHHHHHHHHHC------------------
T ss_pred             HHHHHHHHHHHHHHHHCCCCceehhhceeeccccccCCCccEEEEEeccCCcHHHHHHhhhccc----------------
Confidence            4456888999999999999999999997764322     2399999996 59999997543211                


Q ss_pred             CCCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          86 PPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        86 ~~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                   ....+++.++..++.||++|| .|||+..    .+.|++|.+
T Consensus       130 -------------~~~~~~~~~~~~i~~qi~~al-~~LH~~~ivH~Dikp~NIli  170 (323)
T 3qup_A          130 -------------NPFNLPLQTLVRFMVDIACGM-EYLSSRNFIHRDLAARNCML  170 (323)
T ss_dssp             --------------CCCCCHHHHHHHHHHHHHHH-HHHHHTTCCCSCCSGGGEEE
T ss_pred             -------------cccccCHHHHHHHHHHHHHHH-HHHHcCCcccCCCCcceEEE
Confidence                         112589999999999999999 9999864    445888765

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.24  E-value=5.7e-12  Score=99.94  Aligned_cols=94  Identities=13%  Similarity=0.013  Sum_probs=72.5

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccccc-cHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYA-SLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~~-sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ..+.+++|+.+|.+|+||||+++++.++ +.+.+++||||+.+ +|.+++.......                       
T Consensus        86 ~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~l~-----------------------  141 (348)
T 2pml_X           86 KYDDFKNELQIITDIKNEYCLTCEGIIT-NYDEVYIIYEYMENDSILKFDEYFFVLD-----------------------  141 (348)
T ss_dssp             HHHHHHHHHHHHTTCCCTTBCCCSEEEE-SSSEEEEEEECCTTCBSSEESSSEESSC-----------------------
T ss_pred             HHHHHHHHHHHHHhCCCCCcceEEEEEe-eCCeEEEEEeccCCCcHHHHHHHhhhhh-----------------------
Confidence            4478899999999999999999999776 46799999999964 9988743211100                       


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC-----CcccCccee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS-----TYLPSSVAF  136 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a-----~~~~~~~~~  136 (138)
                          ......+++.+++.++.||++|| .|||+..     .+-|++|.+
T Consensus       142 ----~~~~~~~~~~~~~~i~~qi~~~l-~~lH~~~~i~H~dl~p~Nil~  185 (348)
T 2pml_X          142 ----KNYTCFIPIQVIKCIIKSVLNSF-SYIHNEKNICHRDVKPSNILM  185 (348)
T ss_dssp             ----SSSCCCCCHHHHHHHHHHHHHHH-HHHHHTSCEECCCCCGGGEEE
T ss_pred             ----hccccCCCHHHHHHHHHHHHHHH-HHHhccCCEeecCCChHhEEE
Confidence                00013689999999999999999 9999833     445877765

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.24  E-value=1e-11  Score=97.89  Aligned_cols=87  Identities=11%  Similarity=0.007  Sum_probs=72.0

Q ss_pred             HHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          17 ILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASRP   95 (138)
Q Consensus        17 ~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   95 (138)
                      .+++|+.+|++++||||+++++.+. +.+.+++||||+. ++|.+++......                           
T Consensus        73 ~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~---------------------------  124 (326)
T 3uim_A           73 QFQTEVEMISMAVHRNLLRLRGFCM-TPTERLLVYPYMANGSVASCLRERPES---------------------------  124 (326)
T ss_dssp             HHHHHHHGGGTCCCTTBCCCCEEEC-CSSCCEEEEECCTTCBHHHHHHCCSTT---------------------------
T ss_pred             HHHHHHHHHHhccCCCccceEEEEe-cCCceEEEEEeccCCCHHHHHHhcccc---------------------------
Confidence            5799999999999999999999776 4678999999995 6999999854321                           


Q ss_pred             cccccCCccHHHHHHHHHHHHHHHHhhhcCCC-------CcccCccee
Q psy3822          96 THAREYHFLDIEIKYGVAQVDSSEFTYLYVPS-------TYLPSSVAF  136 (138)
Q Consensus        96 ~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a-------~~~~~~~~~  136 (138)
                          ...+++.++..++.||+.|| +|||+..       .+.|++|.+
T Consensus       125 ----~~~~~~~~~~~i~~~i~~~l-~~lH~~~~~~ivH~Dlkp~Nil~  167 (326)
T 3uim_A          125 ----QPPLDWPKRQRIALGSARGL-AYLHDHCDPKIIHRDVKAANILL  167 (326)
T ss_dssp             ----CCCCCHHHHHHHHHHHHHHH-HHHHHSSSSCEECCCCSGGGEEE
T ss_pred             ----CCCCCHHHHHHHHHHHHHHH-HHHHhCCCCCeEeCCCchhhEEE
Confidence                12589999999999999999 9999872       334777765

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.24  E-value=2.6e-11  Score=93.71  Aligned_cols=83  Identities=12%  Similarity=0.059  Sum_probs=69.4

Q ss_pred             HHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          16 EILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASR   94 (138)
Q Consensus        16 e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (138)
                      +.+.+|+.+|++|+||||+++++.+++ ..  ++||||+. ++|.+.+....                            
T Consensus        68 ~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~--~lv~e~~~~~~L~~~l~~~~----------------------------  116 (287)
T 4f0f_A           68 QEFQREVFIMSNLNHPNIVKLYGLMHN-PP--RMVMEFVPCGDLYHRLLDKA----------------------------  116 (287)
T ss_dssp             HHHHHHHHHHTTCCCTTBCCEEEEETT-TT--EEEEECCTTCBHHHHHHCTT----------------------------
T ss_pred             HHHHHHHHHHHhCCCCCchhhheeecC-CC--eEEEEecCCCCHHHHHhccc----------------------------
Confidence            678999999999999999999997653 33  79999996 79999887432                            


Q ss_pred             CcccccCCccHHHHHHHHHHHHHHHHhhhcCCC------CcccCccee
Q psy3822          95 PTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS------TYLPSSVAF  136 (138)
Q Consensus        95 ~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a------~~~~~~~~~  136 (138)
                            ..+++.++..++.||+.|| +|||+..      .+.|++|.+
T Consensus       117 ------~~~~~~~~~~~~~~l~~~l-~~lH~~~~~ivH~dikp~Nil~  157 (287)
T 4f0f_A          117 ------HPIKWSVKLRLMLDIALGI-EYMQNQNPPIVHRDLRSPNIFL  157 (287)
T ss_dssp             ------SCCCHHHHHHHHHHHHHHH-HHHHTSSSCCBCSCCSGGGEEE
T ss_pred             ------CCccHHHHHHHHHHHHHHH-HHHHhCCCCeecCCCCcceEEE
Confidence                  1588999999999999999 9999876      234888765

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.24  E-value=3.1e-11  Score=94.75  Aligned_cols=90  Identities=12%  Similarity=0.012  Sum_probs=75.2

Q ss_pred             cchHHHHHHHHHHHHhhhCC--CCCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          10 RKETVTEILRLGVKQLEVYR--HPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPP   87 (138)
Q Consensus        10 ~~e~~~e~lrrEi~~L~rLr--HPnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~   87 (138)
                      ......+.+++|+..|.+|+  ||||+++++.+. +.+.+++|||+..++|.+++....                     
T Consensus        65 ~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~-~~~~~~lv~e~~~~~L~~~l~~~~---------------------  122 (313)
T 3cek_A           65 ADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEI-TDQYIYMVMECGNIDLNSWLKKKK---------------------  122 (313)
T ss_dssp             CCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEE-CSSEEEEEECCCSEEHHHHHHHCS---------------------
T ss_pred             ccccchHHHHHHHHHHHhccccCCceEEEEEEee-cCCEEEEEEecCCCcHHHHHHhcC---------------------
Confidence            34556788999999999998  499999999665 467899999977889999998532                     


Q ss_pred             CCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          88 ANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        88 ~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                    .+++.+++.++.||++|| .|||+..    .+.|++|.+
T Consensus       123 --------------~~~~~~~~~i~~qi~~aL-~~LH~~~ivH~dlkp~NIl~  160 (313)
T 3cek_A          123 --------------SIDPWERKSYWKNMLEAV-HTIHQHGIVHSDLKPANFLI  160 (313)
T ss_dssp             --------------SCCHHHHHHHHHHHHHHH-HHHHHTTCCCCCCCGGGEEE
T ss_pred             --------------CCCHHHHHHHHHHHHHHH-HHHHHCCceecCCCcccEEE
Confidence                          578899999999999999 9999864    445887764

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.24  E-value=2.8e-11  Score=101.74  Aligned_cols=86  Identities=10%  Similarity=0.002  Sum_probs=73.3

Q ss_pred             HHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccc-cccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPV-YASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSAS   93 (138)
Q Consensus        15 ~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V-~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (138)
                      .+.+++|+.+|.+++||||+++++.++ +.+.+|+||||+ .++|.++|.+..                           
T Consensus       105 ~~~~~~E~~il~~~~hp~Iv~l~~~~~-~~~~~~lVmE~~~gg~L~~~l~~~~---------------------------  156 (412)
T 2vd5_A          105 VSCFREERDVLVNGDRRWITQLHFAFQ-DENYLYLVMEYYVGGDLLTLLSKFG---------------------------  156 (412)
T ss_dssp             GCCHHHHHHHHHHSCTTTBCCEEEEEE-CSSEEEEEECCCCSCBHHHHHHHHS---------------------------
T ss_pred             HHHHHHHHHHHHhcCCCCeeeEEEEEe-eCCEEEEEEcCCCCCcHHHHHHhcC---------------------------
Confidence            355889999999999999999999876 477999999999 579999998543                           


Q ss_pred             CCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          94 RPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        94 ~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                             ..+++.+++.++.||+.|| +|||+..    .+.|++|.+
T Consensus       157 -------~~l~~~~~~~~~~qi~~aL-~~LH~~giiHrDLKp~NILl  195 (412)
T 2vd5_A          157 -------ERIPAEMARFYLAEIVMAI-DSVHRLGYVHRDIKPDNILL  195 (412)
T ss_dssp             -------SCCCHHHHHHHHHHHHHHH-HHHHHTTEECCCCSGGGEEE
T ss_pred             -------CCCCHHHHHHHHHHHHHHH-HHHHHCCeeecccCHHHeee
Confidence                   1588999999999999999 9999854    455888764

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.23  E-value=2.8e-11  Score=95.15  Aligned_cols=87  Identities=15%  Similarity=0.121  Sum_probs=72.4

Q ss_pred             HHHHHHHHHhhhC-CCCCeeEEeceeeec-----CCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          16 EILRLGVKQLEVY-RHPKILSVLHPIEEC-----PDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPA   88 (138)
Q Consensus        16 e~lrrEi~~L~rL-rHPnIL~l~e~~ee~-----~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (138)
                      +.+++|+..|++| +||||+++++.+...     .+.+++||||+. ++|.+++....                      
T Consensus        65 ~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----------------------  122 (326)
T 2x7f_A           65 EEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTK----------------------  122 (326)
T ss_dssp             HHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEEEEEECCTTEEHHHHHHHSG----------------------
T ss_pred             HHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEEEEEEcCCCCcHHHHHHhcc----------------------
Confidence            5678999999999 899999999987753     458999999996 59999998542                      


Q ss_pred             CCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          89 NQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        89 ~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                 ...+++.+++.++.||++|| .|||+..    .+.|++|.+
T Consensus       123 -----------~~~~~~~~~~~i~~qi~~~l-~~lH~~~ivH~dlkp~NIl~  162 (326)
T 2x7f_A          123 -----------GNTLKEEWIAYICREILRGL-SHLHQHKVIHRDIKGQNVLL  162 (326)
T ss_dssp             -----------GGCCCHHHHHHHHHHHHHHH-HHHHHTTCCCCCCSGGGEEE
T ss_pred             -----------cCCCCHHHHHHHHHHHHHHH-HHHHHCCccccCCcHHHEEE
Confidence                       12588999999999999999 9999754    445888765

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.23  E-value=3.1e-11  Score=102.27  Aligned_cols=85  Identities=11%  Similarity=0.022  Sum_probs=72.4

Q ss_pred             HHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccc-cccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          16 EILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPV-YASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASR   94 (138)
Q Consensus        16 e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V-~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (138)
                      +.+++|+.+|.+++||||+++++.++ +.+.+|+||||+ .++|.++|....                            
T Consensus       119 ~~~~~E~~il~~~~hp~Iv~l~~~~~-~~~~~~lV~Ey~~gg~L~~~l~~~~----------------------------  169 (437)
T 4aw2_A          119 ACFREERDVLVNGDSKWITTLHYAFQ-DDNNLYLVMDYYVGGDLLTLLSKFE----------------------------  169 (437)
T ss_dssp             CCHHHHHHHHHHSCTTTBCCEEEEEE-CSSEEEEEECCCTTCBHHHHHHTTT----------------------------
T ss_pred             HHHHHHHHHHHhCCCCCEEEEEEEEe-eCCEEEEEEecCCCCcHHHHHHHcc----------------------------
Confidence            34789999999999999999999876 477999999999 579999998532                            


Q ss_pred             CcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          95 PTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        95 ~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                            ..|+|.+++.++.||+.|| +|||+..    .+.|++|.+
T Consensus       170 ------~~l~e~~~~~~~~qi~~aL-~~LH~~giiHrDLKp~NILl  208 (437)
T 4aw2_A          170 ------DRLPEEMARFYLAEMVIAI-DSVHQLHYVHRDIKPDNILM  208 (437)
T ss_dssp             ------TCCCHHHHHHHHHHHHHHH-HHHHHTTEECCCCSGGGEEE
T ss_pred             ------CCCCHHHHHHHHHHHHHHH-HHHHhCCeEecccCHHHeeE
Confidence                  1589999999999999999 9999854    455888764

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.22  E-value=1.8e-11  Score=102.61  Aligned_cols=87  Identities=15%  Similarity=0.154  Sum_probs=72.8

Q ss_pred             HHHHHHHHHHHHhhhC-CCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVY-RHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rL-rHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      ...+.+++|+.+|.++ +||||+++++.++ +.+.+||||||+. ++|.+.+....                        
T Consensus        94 ~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~-~~~~~~lV~E~~~gg~L~~~l~~~~------------------------  148 (396)
T 4dc2_A           94 EDIDWVQTEKHVFEQASNHPFLVGLHSCFQ-TESRLFFVIEYVNGGDLMFHMQRQR------------------------  148 (396)
T ss_dssp             --CCHHHHHHHHHHHHTTCTTBCCEEEEEE-CSSEEEEEEECCTTCBHHHHHHHHS------------------------
T ss_pred             HHHHHHHHHHHHHHhcCCCCCcCeeEEEEE-ECCEEEEEEEcCCCCcHHHHHHHcC------------------------
Confidence            3446788999999887 8999999999776 5789999999995 69999998543                        


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                 .|++.+++.++.||+.|| +|||+..    .+.|++|.+
T Consensus       149 -----------~l~~~~~~~~~~qi~~aL-~~LH~~givHrDLKp~NILl  186 (396)
T 4dc2_A          149 -----------KLPEEHARFYSAEISLAL-NYLHERGIIYRDLKLDNVLL  186 (396)
T ss_dssp             -----------SCCHHHHHHHHHHHHHHH-HHHHHTTCBCCCCCGGGEEE
T ss_pred             -----------CCCHHHHHHHHHHHHHHH-HHHHHCCEEeccCCHHHEEE
Confidence                       589999999999999999 9999864    445888765

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.22  E-value=2.5e-11  Score=98.86  Aligned_cols=86  Identities=13%  Similarity=0.057  Sum_probs=69.7

Q ss_pred             HHHHHHhhhCCCCCeeEEeceeeec-------------------------------------CCeEEEEeccccccHHHH
Q psy3822          19 RLGVKQLEVYRHPKILSVLHPIEEC-------------------------------------PDALAFATEPVYASLASI   61 (138)
Q Consensus        19 rrEi~~L~rLrHPnIL~l~e~~ee~-------------------------------------~~~L~fVtE~V~~sL~~~   61 (138)
                      .+|+.+|++|+||||+++++.+...                                     ...+++||||+.++|.+.
T Consensus        48 ~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~  127 (383)
T 3eb0_A           48 NRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKV  127 (383)
T ss_dssp             CHHHHHHTTCCCTTBCCEEEEEEEC-------------------------------------CCEEEEEECCCSEEHHHH
T ss_pred             HHHHHHHHHcCCCCccchhheeeecCcccccccccccccccccccccccccccccccccCCCceEEEEEEecCCccHHHH
Confidence            4899999999999999999977432                                     235999999999999999


Q ss_pred             HhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          62 LAFQESPAPNHSTNPVTGGSGSSPPPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        62 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                      +......                               ...+++.+++.++.||+.|| .|||+..    .+.|++|.+
T Consensus       128 l~~~~~~-------------------------------~~~l~~~~~~~i~~qi~~aL-~~LH~~gi~H~Dikp~Nil~  174 (383)
T 3eb0_A          128 LKSFIRS-------------------------------GRSIPMNLISIYIYQLFRAV-GFIHSLGICHRDIKPQNLLV  174 (383)
T ss_dssp             HHHHHHT-------------------------------TCCCCHHHHHHHHHHHHHHH-HHHHTTTEECSCCCGGGEEE
T ss_pred             HHHHHhc-------------------------------CCCCCHHHHHHHHHHHHHHH-HHHHHCcCccCccCHHHEEE
Confidence            8753211                               12689999999999999999 9999754    445888765

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.22  E-value=1.4e-11  Score=101.07  Aligned_cols=95  Identities=17%  Similarity=0.243  Sum_probs=72.3

Q ss_pred             cCCCCcchHHHHHHHHHHHHhhhCCCCCeeEEeceeeec-----CCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCC
Q psy3822           5 LHKPKRKETVTEILRLGVKQLEVYRHPKILSVLHPIEEC-----PDALAFATEPVYASLASILAFQESPAPNHSTNPVTG   79 (138)
Q Consensus         5 ~~K~~~~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~-----~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~   79 (138)
                      +.++.......+.+.+|+.+|++|+||||+++++.+...     .+.+|+|||++.++|.+++...              
T Consensus        62 ~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~--------------  127 (367)
T 2fst_X           62 LSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--------------  127 (367)
T ss_dssp             CSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEEECCCEECC-----C--------------
T ss_pred             eCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCeEEEEecccCCCHHHHHhcC--------------
Confidence            333334445667889999999999999999999976532     2568999999999998888631              


Q ss_pred             CCCCCCCCCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          80 GSGSSPPPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                            .+++.+++.++.||++|| +|||+..    .+.|++|.+
T Consensus       128 ----------------------~l~~~~~~~i~~qi~~aL-~~LH~~givH~Dlkp~NIll  165 (367)
T 2fst_X          128 ----------------------KLTDDHVQFLIYQILRGL-KYIHSADIIHRDLKPSNLAV  165 (367)
T ss_dssp             ----------------------CCCHHHHHHHHHHHHHHH-HHHHHTTCCCCCCCGGGEEE
T ss_pred             ----------------------CCCHHHHHHHHHHHHHHH-HHHHHCCeeeCCCCHhhEEE
Confidence                                  588999999999999999 9999754    445888765

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.22  E-value=6.6e-11  Score=91.44  Aligned_cols=85  Identities=13%  Similarity=0.021  Sum_probs=72.4

Q ss_pred             HHHHHHHHHhhhC-CCCCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          16 EILRLGVKQLEVY-RHPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASR   94 (138)
Q Consensus        16 e~lrrEi~~L~rL-rHPnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (138)
                      +.+++|+..+++| +||||+++++..+ ..+.+++||||+.++|.+++....                            
T Consensus        50 ~~~~~e~~~~~~l~~~~~i~~~~~~~~-~~~~~~lv~e~~~~~L~~~l~~~~----------------------------  100 (298)
T 1csn_A           50 PQLRDEYRTYKLLAGCTGIPNVYYFGQ-EGLHNVLVIDLLGPSLEDLLDLCG----------------------------  100 (298)
T ss_dssp             CCHHHHHHHHHHTTTCTTCCCEEEEEE-ETTEEEEEEECCCCBHHHHHHHTT----------------------------
T ss_pred             HHHHHHHHHHHHHhcCCCCCeEEeecC-CCceeEEEEEecCCCHHHHHHHhc----------------------------
Confidence            4578999999999 7999999999665 577999999999889999998543                            


Q ss_pred             CcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          95 PTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        95 ~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                            ..+++.++..++.||++|| +|||+..    .+.|++|.+
T Consensus       101 ------~~~~~~~~~~i~~qi~~~l-~~lH~~~ivH~Dlkp~NIl~  139 (298)
T 1csn_A          101 ------RKFSVKTVAMAAKQMLARV-QSIHEKSLVYRDIKPDNFLI  139 (298)
T ss_dssp             ------TCCCHHHHHHHHHHHHHHH-HHHHTTTEECCCCCGGGEEE
T ss_pred             ------cCCCHHHHHHHHHHHHHHH-HHHHhCCEecCCCCHHHEEe
Confidence                  1588999999999999999 9999864    455888876

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.21  E-value=1.2e-11  Score=102.89  Aligned_cols=84  Identities=14%  Similarity=0.127  Sum_probs=68.9

Q ss_pred             HHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSAS   93 (138)
Q Consensus        15 ~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (138)
                      ...+.+|+.+|++|+||||+++++.++  .+.+++||||+. ++|.+.+...                            
T Consensus       184 ~~~~~~E~~~l~~l~hpniv~l~~~~~--~~~~~lv~e~~~~g~L~~~l~~~----------------------------  233 (419)
T 3i6u_A          184 ALNVETEIEILKKLNHPCIIKIKNFFD--AEDYYIVLELMEGGELFDKVVGN----------------------------  233 (419)
T ss_dssp             -CCHHHHHHHHHHCCCTTBCCCCEEEE--SSEEEEEEECCTTCBGGGGTSSS----------------------------
T ss_pred             HHHHHHHHHHHHhCCCCCEeeEEEEEe--cCceEEEEEcCCCCcHHHHHhcc----------------------------
Confidence            345789999999999999999999764  356899999995 6998777532                            


Q ss_pred             CCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          94 RPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        94 ~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                             ..+++.+++.++.||++|| +|||+..    .+.|++|.+
T Consensus       234 -------~~~~~~~~~~i~~qi~~~l-~~LH~~~ivHrDlkp~NIll  272 (419)
T 3i6u_A          234 -------KRLKEATCKLYFYQMLLAV-QYLHENGIIHRDLKPENVLL  272 (419)
T ss_dssp             -------CCCCHHHHHHHHHHHHHHH-HHHHHTTCCCSCCCGGGEEE
T ss_pred             -------CCCCHHHHHHHHHHHHHHH-HHHHHCCccccCCChHhEEE
Confidence                   1589999999999999999 9999754    445888776

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.21  E-value=7.6e-11  Score=93.28  Aligned_cols=86  Identities=15%  Similarity=0.021  Sum_probs=68.7

Q ss_pred             HHHHHHHHHHhhhC-CCCCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVY-RHPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSAS   93 (138)
Q Consensus        15 ~e~lrrEi~~L~rL-rHPnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (138)
                      .....+|+..+.++ +||||+++++.+++ .+.+++||||+.++|.+.+....                           
T Consensus       100 ~~~~~~e~~~~~~~~~h~~iv~l~~~~~~-~~~~~lv~e~~~~~L~~~~~~~~---------------------------  151 (311)
T 3p1a_A          100 RARKLAEVGSHEKVGQHPCCVRLEQAWEE-GGILYLQTELCGPSLQQHCEAWG---------------------------  151 (311)
T ss_dssp             HHHHHHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEEEEECCCCBHHHHHHHHC---------------------------
T ss_pred             HHHHHHHHHHHHHhcCCCcEEEEEEEEEe-CCEEEEEEeccCCCHHHHHHhcC---------------------------
Confidence            34445555555554 99999999998765 67999999999999999987543                           


Q ss_pred             CCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          94 RPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        94 ~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                             ..+++.+++.++.||+.|| +|||+..    .+.|++|.+
T Consensus       152 -------~~l~~~~~~~i~~qi~~aL-~~LH~~~ivH~Dikp~NIll  190 (311)
T 3p1a_A          152 -------ASLPEAQVWGYLRDTLLAL-AHLHSQGLVHLDVKPANIFL  190 (311)
T ss_dssp             -------SCCCHHHHHHHHHHHHHHH-HHHHHTTEECCCCSGGGEEE
T ss_pred             -------CCCCHHHHHHHHHHHHHHH-HHHHHCCEecCCCCHHHEEE
Confidence                   1589999999999999999 9999754    445887765

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.21  E-value=1.7e-11  Score=94.34  Aligned_cols=86  Identities=9%  Similarity=0.137  Sum_probs=71.1

Q ss_pred             HHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSAS   93 (138)
Q Consensus        15 ~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (138)
                      .+.+.+|+.+|++|+||||+++++.+.  .+.+++||||+. ++|.+++....                           
T Consensus        52 ~~~~~~E~~~l~~l~h~~i~~~~~~~~--~~~~~~v~e~~~~~~L~~~l~~~~---------------------------  102 (279)
T 1qpc_A           52 PDAFLAEANLMKQLQHQRLVRLYAVVT--QEPIYIITEYMENGSLVDFLKTPS---------------------------  102 (279)
T ss_dssp             HHHHHHHHHHHHHCCCTTBCCEEEEEC--SSSCEEEEECCTTCBHHHHTTSHH---------------------------
T ss_pred             HHHHHHHHHHHHhCCCcCcceEEEEEc--CCCcEEEEecCCCCCHHHHHhcCC---------------------------
Confidence            467899999999999999999999664  356999999995 79999987432                           


Q ss_pred             CCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          94 RPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        94 ~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                            ...+++.++..++.||++|| +|||+..    .+.|++|.+
T Consensus       103 ------~~~~~~~~~~~i~~qi~~~l-~~lH~~~i~H~dikp~Nil~  142 (279)
T 1qpc_A          103 ------GIKLTINKLLDMAAQIAEGM-AFIEERNYIHRDLRAANILV  142 (279)
T ss_dssp             ------HHTCCHHHHHHHHHHHHHHH-HHHHHTTEECSCCSGGGEEE
T ss_pred             ------CCCCCHHHHHHHHHHHHHHH-HHHHHCCeeccCCCHhhEEE
Confidence                  12588899999999999999 9999754    445887765

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.21  E-value=1.5e-11  Score=98.52  Aligned_cols=93  Identities=16%  Similarity=0.250  Sum_probs=73.7

Q ss_pred             CCCCcchHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCC-----eEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCC
Q psy3822           6 HKPKRKETVTEILRLGVKQLEVYRHPKILSVLHPIEECPD-----ALAFATEPVYASLASILAFQESPAPNHSTNPVTGG   80 (138)
Q Consensus         6 ~K~~~~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~-----~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~   80 (138)
                      .+....+...+.+.+|+.+|++|+||||+++++.+.+...     .+++||||+.++|.+++.                 
T Consensus        58 ~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~-----------------  120 (353)
T 3coi_A           58 SRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMG-----------------  120 (353)
T ss_dssp             SSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEEECCSEEGGGTTT-----------------
T ss_pred             cccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccceeEEEEeccccCCHHHHhc-----------------
Confidence            3333455667888999999999999999999997764322     359999999988876653                 


Q ss_pred             CCCCCCCCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          81 SGSSPPPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                          ..+++.+++.++.||++|| +|||+..    .+.|++|.+
T Consensus       121 --------------------~~~~~~~~~~i~~qi~~al-~~LH~~~ivH~dlkp~NIl~  159 (353)
T 3coi_A          121 --------------------LKFSEEKIQYLVYQMLKGL-KYIHSAGVVHRDLKPGNLAV  159 (353)
T ss_dssp             --------------------SCCCHHHHHHHHHHHHHHH-HHHHHTTCCCSSCCGGGEEE
T ss_pred             --------------------CCCCHHHHHHHHHHHHHHH-HHHHHCCcccCCCCHHHEeE
Confidence                                1488999999999999999 9999764    445888765

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.21  E-value=1.4e-11  Score=98.98  Aligned_cols=88  Identities=8%  Similarity=-0.070  Sum_probs=71.3

Q ss_pred             HHHHHHHHHhhhCCCCCeeE---------------EeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCC
Q psy3822          16 EILRLGVKQLEVYRHPKILS---------------VLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGG   80 (138)
Q Consensus        16 e~lrrEi~~L~rLrHPnIL~---------------l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~   80 (138)
                      +.+.+|+.+|++|+||||++               +++...+..+.+++||||+.++|.+++....              
T Consensus        87 ~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~i~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~--------------  152 (352)
T 2jii_A           87 GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIPTCMGFGVHQDKYRFLVLPSLGRSLQSALDVSP--------------  152 (352)
T ss_dssp             STHHHHHHHHHHHCCHHHHHHHHHHTTCTTCSCCCCCEEEEETTTEEEEEEECCCEEHHHHHHHSG--------------
T ss_pred             chHHHHHHHHHHhcccchhhhhhhhccCCccCccchhhccccCCcEEEEEecCCCcCHHHHHHhCC--------------
Confidence            45789999999999999998               4444444467899999999889999998542              


Q ss_pred             CCCCCCCCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcceee
Q psy3822          81 SGSSPPPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAFC  137 (138)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~~  137 (138)
                                         ...+++.++..++.||++|| +|||+..    .+.|++|.+.
T Consensus       153 -------------------~~~l~~~~~~~i~~qi~~~L-~~LH~~~ivH~Dikp~NIl~~  193 (352)
T 2jii_A          153 -------------------KHVLSERSVLQVACRLLDAL-EFLHENEYVHGNVTAENIFVD  193 (352)
T ss_dssp             -------------------GGCCCHHHHHHHHHHHHHHH-HHHHHTTCBCSCCCGGGEEEE
T ss_pred             -------------------cCCCCHHHHHHHHHHHHHHH-HHHHhCCccCCCCCHHHEEEc
Confidence                               12689999999999999999 9999864    4458887653

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.21  E-value=2.8e-11  Score=96.84  Aligned_cols=87  Identities=9%  Similarity=0.024  Sum_probs=72.3

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      ...+.+.+|+.+|++|+||||+++++.+.+  +..+++||++. ++|.+++....                         
T Consensus        59 ~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~~~v~~~~~~g~L~~~l~~~~-------------------------  111 (327)
T 3lzb_A           59 KANKEILDEAYVMASVDNPHVCRLLGICLT--STVQLITQLMPFGCLLDYVREHK-------------------------  111 (327)
T ss_dssp             CCHHHHHHHHHHHTTCCBTTBCCCCEEEES--SSEEEEECCCSSCBHHHHHHHTT-------------------------
T ss_pred             HHHHHHHHHHHHHHhCCCCCeeEEEEEEec--CCceEEEEecCCCcHHHHHHhcC-------------------------
Confidence            345778999999999999999999997764  34889999985 79999998543                         


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                               ..+++.++..++.||+.|| .|||+..    .+.|++|.+
T Consensus       112 ---------~~~~~~~~~~i~~qi~~aL-~~LH~~~ivH~Dikp~NIl~  150 (327)
T 3lzb_A          112 ---------DNIGSQYLLNWCVQIAKGM-NYLEDRRLVHRDLAARNVLV  150 (327)
T ss_dssp             ---------TCCCHHHHHHHHHHHHHHH-HHHHHTTCCCSCCCGGGEEE
T ss_pred             ---------CCCCHHHHHHHHHHHHHHH-HHHhhCCCcCCCCCHHHEEE
Confidence                     1588899999999999999 9999764    445888765

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.20  E-value=5.5e-11  Score=97.47  Aligned_cols=86  Identities=15%  Similarity=0.117  Sum_probs=73.1

Q ss_pred             HHHHHHHHHHHhhhC-CCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVY-RHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        14 ~~e~lrrEi~~L~rL-rHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      ..+.+.+|..+|.++ +||||+++++.++ +.+.+|+||||+. ++|.+++....                         
T Consensus        63 ~~~~~~~E~~~l~~~~~hp~iv~l~~~~~-~~~~~~lv~E~~~gg~L~~~l~~~~-------------------------  116 (353)
T 2i0e_A           63 DVECTMVEKRVLALPGKPPFLTQLHSCFQ-TMDRLYFVMEYVNGGDLMYHIQQVG-------------------------  116 (353)
T ss_dssp             CHHHHHHHHHHHTCTTCCTTBCCEEEEEE-CSSEEEEEEECCCSCBHHHHHHHHS-------------------------
T ss_pred             HHHHHHHHHHHHHhcCCCCEEeeEEEEEE-cCCEEEEEEeCCCCCcHHHHHHhcC-------------------------
Confidence            356788999999988 8999999999776 5779999999995 69999998543                         


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                .+++.+++.++.||+.|| +|||+..    .+.|++|.+
T Consensus       117 ----------~~~~~~~~~~~~qi~~aL-~~LH~~givHrDlkp~NIll  154 (353)
T 2i0e_A          117 ----------RFKEPHAVFYAAEIAIGL-FFLQSKGIIYRDLKLDNVML  154 (353)
T ss_dssp             ----------SCCHHHHHHHHHHHHHHH-HHHHHTTCBCCCCCGGGEEE
T ss_pred             ----------CCCHHHHHHHHHHHHHHH-HHHHHCCEEeccCCHHHEEE
Confidence                      588999999999999999 9999864    445887764

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.20  E-value=6.3e-11  Score=96.46  Aligned_cols=88  Identities=16%  Similarity=0.223  Sum_probs=74.6

Q ss_pred             hHHHHHHHHHHHHhhhC-CCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVY-RHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPAN   89 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rL-rHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (138)
                      +...+.+++|+.+|.++ +||||+++++.++ ..+.+++||||+. ++|.+++....                       
T Consensus       140 ~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~-~~~~~~lv~e~~~g~~L~~~l~~~~-----------------------  195 (365)
T 2y7j_A          140 EEVREATRRETHILRQVAGHPHIITLIDSYE-SSSFMFLVFDLMRKGELFDYLTEKV-----------------------  195 (365)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE-BSSEEEEEECCCTTCBHHHHHHHHS-----------------------
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCEeEEEEEEe-eCCEEEEEEEeCCCCcHHHHHHhcC-----------------------
Confidence            45578889999999999 7999999999776 4679999999996 59999998542                       


Q ss_pred             CCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          90 QSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        90 ~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                  .+++.+++.++.||+.|| .|||+..    .+-|++|.+
T Consensus       196 ------------~l~~~~~~~i~~qi~~~L-~~LH~~gi~H~Dlkp~NIl~  233 (365)
T 2y7j_A          196 ------------ALSEKETRSIMRSLLEAV-SFLHANNIVHRDLKPENILL  233 (365)
T ss_dssp             ------------SCCHHHHHHHHHHHHHHH-HHHHHTTEECSCCSGGGEEE
T ss_pred             ------------CCCHHHHHHHHHHHHHHH-HHHHhCCeecCCCCHHHEEE
Confidence                        588999999999999999 9999864    445887765

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.20  E-value=3.3e-11  Score=97.99  Aligned_cols=93  Identities=17%  Similarity=0.272  Sum_probs=75.0

Q ss_pred             cCCCCcchHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCe------EEEEeccccccHHHHHhhcCCCCCCCCCCCCC
Q psy3822           5 LHKPKRKETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDA------LAFATEPVYASLASILAFQESPAPNHSTNPVT   78 (138)
Q Consensus         5 ~~K~~~~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~------L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~   78 (138)
                      +.++...+...+.+.+|+.+|++|+||||+++++.+.+ .+.      +++||||+.++|.+++..              
T Consensus        75 ~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~~~~~~~~~lv~e~~~~~l~~~~~~--------------  139 (371)
T 4exu_A           75 LSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTP-ASSLRNFYDFYLVMPFMQTDLQKIMGM--------------  139 (371)
T ss_dssp             ECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECS-CSSSTTCCCCEEEEECCCEEHHHHTTS--------------
T ss_pred             ecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheec-cCCcccceeEEEEEccccccHHHHhhc--------------
Confidence            33434456667889999999999999999999997764 333      399999999999887741              


Q ss_pred             CCCCCCCCCCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          79 GGSGSSPPPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                             .+++.+++.++.||+.|| +|||+..    .+.|++|.+
T Consensus       140 -----------------------~~~~~~~~~i~~qi~~aL-~~LH~~~ivH~Dikp~NIll  177 (371)
T 4exu_A          140 -----------------------EFSEEKIQYLVYQMLKGL-KYIHSAGVVHRDLKPGNLAV  177 (371)
T ss_dssp             -----------------------CCCHHHHHHHHHHHHHHH-HHHHHTTCCCSCCCGGGEEE
T ss_pred             -----------------------CCCHHHHHHHHHHHHHHH-HHHHHCCCcCCCcCHHHeEE
Confidence                                   488999999999999999 9999864    445877764

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.20  E-value=2.5e-11  Score=101.95  Aligned_cols=84  Identities=17%  Similarity=0.118  Sum_probs=69.3

Q ss_pred             HHHHHHHHhhhC-CCCCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          17 ILRLGVKQLEVY-RHPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASRP   95 (138)
Q Consensus        17 ~lrrEi~~L~rL-rHPnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   95 (138)
                      .+.+|+.+|+++ +||||+++++.++ +.+.+|+|||++.++|.+++.....                            
T Consensus        63 ~~~~E~~~l~~l~~HpnIv~l~~~~~-~~~~~~lv~E~~~g~L~~~l~~~~~----------------------------  113 (432)
T 3p23_A           63 FADREVQLLRESDEHPNVIRYFCTEK-DRQFQYIAIELCAATLQEYVEQKDF----------------------------  113 (432)
T ss_dssp             ECHHHHHHHHHSCCCTTBCCEEEEEE-ETTEEEEEEECCSEEHHHHHHSSSC----------------------------
T ss_pred             HHHHHHHHHHhccCCCCcCeEEEEEe-cCCEEEEEEECCCCCHHHHHHhcCC----------------------------
Confidence            357899999999 8999999999766 5778999999999999999985431                            


Q ss_pred             cccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          96 THAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        96 ~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                            .+.+.++..++.||++|| +|||+..    .+.|++|.+
T Consensus       114 ------~~~~~~~~~i~~qi~~aL-~~LH~~~ivHrDlKp~NIll  151 (432)
T 3p23_A          114 ------AHLGLEPITLLQQTTSGL-AHLHSLNIVHRDLKPHNILI  151 (432)
T ss_dssp             ------CCCSSCHHHHHHHHHHHH-HHHHHTTCCCCCCSTTSEEE
T ss_pred             ------CccchhHHHHHHHHHHHH-HHHHHCcCEeCCCCHHHEEE
Confidence                  244456788999999999 9999854    456888876

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.20  E-value=2.3e-12  Score=100.84  Aligned_cols=87  Identities=14%  Similarity=0.111  Sum_probs=72.2

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ..+.+++|+.+|++|+||||+++++.+. +.+.+++||||+. ++|.+++....                          
T Consensus        72 ~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~iv~e~~~~~~L~~~l~~~~--------------------------  124 (319)
T 2y4i_B           72 QLKAFKREVMAYRQTRHENVVLFMGACM-SPPHLAIITSLCKGRTLYSVVRDAK--------------------------  124 (319)
T ss_dssp             CCCCCCTTGGGGTTCCCTTBCCCCEEEE-CSSCEEEECBCCCSEEHHHHTTSSC--------------------------
T ss_pred             HHHHHHHHHHHHhcCCCCCEeEEEEEEe-cCCceEEEeecccCCcHHHHHHhcC--------------------------
Confidence            3456789999999999999999999776 4678999999995 79999997432                          


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                              ..+++.++..++.||++|| +|||+..    .+.|++|.+
T Consensus       125 --------~~~~~~~~~~i~~qi~~al-~~lH~~~i~H~dlkp~NIl~  163 (319)
T 2y4i_B          125 --------IVLDVNKTRQIAQEIVKGM-GYLHAKGILHKDLKSKNVFY  163 (319)
T ss_dssp             --------CCCCSHHHHHHHHHHHHHH-HHHHHTTCCCCCCCSTTEEE
T ss_pred             --------CCCCHHHHHHHHHHHHHHH-HHHHhCCccccCCChhhEEE
Confidence                    1588899999999999999 9999764    445888764

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.20  E-value=2.4e-11  Score=101.92  Aligned_cols=85  Identities=16%  Similarity=0.166  Sum_probs=70.4

Q ss_pred             HHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          16 EILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASR   94 (138)
Q Consensus        16 e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (138)
                      +.+.+|+.+|++|+||||+++++.+.+  +.+++||||+. ++|.++|.....                           
T Consensus       224 ~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~~iv~e~~~~gsL~~~l~~~~~---------------------------  274 (452)
T 1fmk_A          224 EAFLQEAQVMKKLRHEKLVQLYAVVSE--EPIYIVTEYMSKGSLLDFLKGETG---------------------------  274 (452)
T ss_dssp             HHHHHHHHHHHHCCCTTBCCEEEEECS--SSCEEEECCCTTCBHHHHHSHHHH---------------------------
T ss_pred             HHHHHHHHHHHhCCCCCEeeEEEEEcC--CceEEEehhhcCCCHHHHHHhcCC---------------------------
Confidence            568999999999999999999997653  67999999995 699999974321                           


Q ss_pred             CcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          95 PTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        95 ~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                            ..+++.++..++.||++|| +|||+..    .+.|++|.+
T Consensus       275 ------~~~~~~~~~~i~~qi~~~l-~~LH~~~ivHrDlkp~Nill  313 (452)
T 1fmk_A          275 ------KYLRLPQLVDMAAQIASGM-AYVERMNYVHRDLRAANILV  313 (452)
T ss_dssp             ------TTCCHHHHHHHHHHHHHHH-HHHHHTTCCCSCCSGGGEEE
T ss_pred             ------CCCCHHHHHHHHHHHHHHH-HHHHhCCeeCCCCChhhEEE
Confidence                  1478889999999999999 9999754    445777764

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.19  E-value=6.3e-12  Score=102.24  Aligned_cols=96  Identities=11%  Similarity=0.020  Sum_probs=71.3

Q ss_pred             hHHHHHHHHHH---HHhhhCCCCCeeEEe-------ceeeecCC----------------eEEEEeccccccHHHHHhhc
Q psy3822          12 ETVTEILRLGV---KQLEVYRHPKILSVL-------HPIEECPD----------------ALAFATEPVYASLASILAFQ   65 (138)
Q Consensus        12 e~~~e~lrrEi---~~L~rLrHPnIL~l~-------e~~ee~~~----------------~L~fVtE~V~~sL~~~L~~~   65 (138)
                      ....+.+++|+   +.|++++||||++++       +.+++...                ..|+||||+.++|.+++...
T Consensus       114 ~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~~g~L~~~l~~~  193 (377)
T 3byv_A          114 SNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVL  193 (377)
T ss_dssp             TTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTTSCSEEEC------CEEESEEEEEECCSEEHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccCCccccccccCCCceEEEEEEEEEeccCCCHHHHHHhc
Confidence            44668899999   666777899999998       54432211                38999999999999999864


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          66 ESPAPNHSTNPVTGGSGSSPPPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                      ....                            .....+++..+..++.||++|| +|||+..    .+.|++|.+
T Consensus       194 ~~~~----------------------------~~~~~l~~~~~~~i~~qi~~aL-~~LH~~~ivHrDikp~NIll  239 (377)
T 3byv_A          194 LSHS----------------------------STHKSLVHHARLQLTLQVIRLL-ASLHHYGLVHTYLRPVDIVL  239 (377)
T ss_dssp             HHTT----------------------------TTTHHHHHHHHHHHHHHHHHHH-HHHHHTTEECSCCCGGGEEE
T ss_pred             cccc----------------------------cccccccHHHHHHHHHHHHHHH-HHHHhCCeecCCCCHHHEEE
Confidence            3211                            0012466788889999999999 9999864    556888876

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.19  E-value=5.3e-11  Score=95.87  Aligned_cols=85  Identities=16%  Similarity=0.163  Sum_probs=72.0

Q ss_pred             HHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-c-cHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-A-SLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        15 ~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~-sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      .+.+.+|+.+|++|+||||+++++.++ +.+.+++||||+. + +|.+++....                          
T Consensus        73 ~~~~~~E~~~l~~l~h~~Iv~~~~~~~-~~~~~~lv~e~~~~g~~l~~~~~~~~--------------------------  125 (335)
T 3dls_A           73 LGKVTLEIAILSRVEHANIIKVLDIFE-NQGFFQLVMEKHGSGLDLFAFIDRHP--------------------------  125 (335)
T ss_dssp             TEEEEHHHHHHTTCCCTTBCCEEEEEE-CSSEEEEEEECCTTSCBHHHHHHTCC--------------------------
T ss_pred             HHHHHHHHHHHHhCCCCCEeeEEEEEe-eCCEEEEEEEeCCCCccHHHHHHhcC--------------------------
Confidence            346688999999999999999999776 5779999999984 5 9999997432                          


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                               .+++.+++.++.||+.|| .|||+..    .+.|++|.+
T Consensus       126 ---------~l~~~~~~~i~~qi~~~L-~~LH~~~ivH~Dlkp~NIll  163 (335)
T 3dls_A          126 ---------RLDEPLASYIFRQLVSAV-GYLRLKDIIHRDIKDENIVI  163 (335)
T ss_dssp             ---------CCCHHHHHHHHHHHHHHH-HHHHHTTEECSCCSGGGEEE
T ss_pred             ---------CCCHHHHHHHHHHHHHHH-HHHHhCCeEEeccCHHHEEE
Confidence                     588999999999999999 9999864    455888765

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.19  E-value=7.3e-11  Score=104.29  Aligned_cols=87  Identities=14%  Similarity=0.081  Sum_probs=73.4

Q ss_pred             HHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSAS   93 (138)
Q Consensus        15 ~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (138)
                      .+.+.+|+.+|++|+||||+++++.++ +.+.+|+||||+. ++|.+++.....                          
T Consensus       228 ~~~~~~E~~iL~~l~hp~Iv~l~~~~~-~~~~l~lVmEy~~gg~L~~~l~~~~~--------------------------  280 (576)
T 2acx_A          228 EAMALNEKQILEKVNSRFVVSLAYAYE-TKDALCLVLTLMNGGDLKFHIYHMGQ--------------------------  280 (576)
T ss_dssp             HHHHHHHHHHHHHCCCTTBCCEEEEEE-CSSEEEEEECCCCSCBHHHHHHSSSS--------------------------
T ss_pred             HHHHHHHHHHHHHcCCCCEeeEEEEEe-eCCEEEEEEEcCCCCcHHHHHHhcCC--------------------------
Confidence            456789999999999999999999776 5789999999995 799999975321                          


Q ss_pred             CCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          94 RPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        94 ~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                             ..+++.+++.++.||+.|| +|||+..    .+.|++|.+
T Consensus       281 -------~~l~e~~~~~i~~qIl~aL-~yLH~~gIvHrDLKPeNILl  319 (576)
T 2acx_A          281 -------AGFPEARAVFYAAEICCGL-EDLHRERIVYRDLKPENILL  319 (576)
T ss_dssp             -------CCCCHHHHHHHHHHHHHHH-HHHHHTTEECCCCCGGGEEE
T ss_pred             -------CCCCHHHHHHHHHHHHHHH-HHHHHCCEeccCCchheEEE
Confidence                   1489999999999999999 9999864    455888765

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.19  E-value=6.2e-11  Score=104.93  Aligned_cols=91  Identities=15%  Similarity=0.197  Sum_probs=75.6

Q ss_pred             CcchHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCC
Q psy3822           9 KRKETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPP   87 (138)
Q Consensus         9 ~~~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~   87 (138)
                      ...+...+.+.+|+.+|++|+||||+++++.+.  .+.+++||||+. ++|.+++....                     
T Consensus       429 ~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~--~~~~~lv~E~~~~g~L~~~l~~~~---------------------  485 (656)
T 2j0j_A          429 CTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT--ENPVWIIMELCTLGELRSFLQVRK---------------------  485 (656)
T ss_dssp             TTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC--SSSCEEEEECCTTCBHHHHHHHTT---------------------
T ss_pred             cCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe--cCceEEEEEcCCCCcHHHHHHhcc---------------------
Confidence            345566788999999999999999999999764  356999999996 79999997532                     


Q ss_pred             CCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          88 ANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        88 ~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                   ..+++.++..++.||+.|| .|||+..    .+.|++|.+
T Consensus       486 -------------~~l~~~~~~~i~~qi~~aL-~~LH~~givHrDikp~NILl  524 (656)
T 2j0j_A          486 -------------FSLDLASLILYAYQLSTAL-AYLESKRFVHRDIAARNVLV  524 (656)
T ss_dssp             -------------TTCCHHHHHHHHHHHHHHH-HHHHHTTCCCSCCSGGGEEE
T ss_pred             -------------CCCCHHHHHHHHHHHHHHH-HHHHhCCccccccchHhEEE
Confidence                         2588899999999999999 9999864    445888765

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.19  E-value=8.5e-11  Score=92.12  Aligned_cols=87  Identities=16%  Similarity=0.162  Sum_probs=70.7

Q ss_pred             HHHHHHHHHh-hhCCCCCeeEEeceeee---cCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          16 EILRLGVKQL-EVYRHPKILSVLHPIEE---CPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        16 e~lrrEi~~L-~rLrHPnIL~l~e~~ee---~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      +..++|+..+ +.++||||+++++.+++   ..+.+++||||+. ++|.+++.....                       
T Consensus        55 ~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-----------------------  111 (299)
T 3m2w_A           55 PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGD-----------------------  111 (299)
T ss_dssp             HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCCCSCBHHHHHHHCTT-----------------------
T ss_pred             HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeecCCCcHHHHHHhccC-----------------------
Confidence            4568899998 55799999999997764   2468999999996 599999986431                       


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                ..+++.+++.++.||+.|| .|||+..    .+.|++|.+
T Consensus       112 ----------~~~~~~~~~~i~~qi~~~l-~~lH~~~i~H~dlkp~Nil~  150 (299)
T 3m2w_A          112 ----------QAFTEREASEIMKSIGEAI-QYLHSINIAHRDVKPENLLY  150 (299)
T ss_dssp             ----------CCCBHHHHHHHHHHHHHHH-HHHHHTTEECCCCSGGGEEE
T ss_pred             ----------CCCCHHHHHHHHHHHHHHH-HHHHhCCcccCCCCHHHEEE
Confidence                      2589999999999999999 9999854    445888765

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.19  E-value=4.5e-11  Score=96.52  Aligned_cols=83  Identities=6%  Similarity=-0.109  Sum_probs=68.0

Q ss_pred             HHHHHHhhhCCCCCeeEEeceeeec---CCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          19 RLGVKQLEVYRHPKILSVLHPIEEC---PDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASRP   95 (138)
Q Consensus        19 rrEi~~L~rLrHPnIL~l~e~~ee~---~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   95 (138)
                      .+|+..+.+|+||||+++++.+.+.   ...+++||||+.++|.+++....                             
T Consensus        96 ~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~g~~L~~~~~~~~-----------------------------  146 (364)
T 3op5_A           96 IQKWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRFGSDLQKIYEANA-----------------------------  146 (364)
T ss_dssp             HHHHHHHTTCSCCCSCCEEEEEEEEETTEEEEEEEEECEEEEHHHHHHHTT-----------------------------
T ss_pred             HHHHHHHhhccCCCCCeEEeeeeeccCCcceEEEEEeCCCCCHHHHHHhcc-----------------------------
Confidence            3466677888999999999977653   24699999999889999998532                             


Q ss_pred             cccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          96 THAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        96 ~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                           ..|++.++..++.||+.|| +|||+..    .+.|++|.+
T Consensus       147 -----~~l~~~~~~~i~~qi~~~l-~~lH~~~iiHrDlkp~Nill  185 (364)
T 3op5_A          147 -----KRFSRKTVLQLSLRILDIL-EYIHEHEYVHGDIKASNLLL  185 (364)
T ss_dssp             -----SCCCHHHHHHHHHHHHHHH-HHHHHTTEECCCCCGGGEEE
T ss_pred             -----CCCCHHHHHHHHHHHHHHH-HHHHHCCeEEecCCHHHEEE
Confidence                 1589999999999999999 9999764    556888876

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.19  E-value=5.1e-11  Score=98.68  Aligned_cols=87  Identities=16%  Similarity=0.136  Sum_probs=69.6

Q ss_pred             HHHHHHHHHhhh-CCCCCeeEEeceeee---cCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          16 EILRLGVKQLEV-YRHPKILSVLHPIEE---CPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        16 e~lrrEi~~L~r-LrHPnIL~l~e~~ee---~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      +.+++|+.++.+ ++||||+++++.++.   +.+.+|+||||+. ++|.+++.....                       
T Consensus        99 ~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~-----------------------  155 (400)
T 1nxk_A           99 PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGD-----------------------  155 (400)
T ss_dssp             HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCCSEEHHHHHHCC-------------------------
T ss_pred             hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCCCCcHHHHHHHhCC-----------------------
Confidence            356899999855 589999999997764   2457999999995 699999985321                       


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                ..|++.+++.++.||+.|| +|||+..    .+.|++|.+
T Consensus       156 ----------~~l~~~~~~~i~~qi~~aL-~~LH~~~ivHrDlkp~Nill  194 (400)
T 1nxk_A          156 ----------QAFTEREASEIMKSIGEAI-QYLHSINIAHRDVKPENLLY  194 (400)
T ss_dssp             -----------CCBHHHHHHHHHHHHHHH-HHHHHTTEECCCCCGGGEEE
T ss_pred             ----------CCCCHHHHHHHHHHHHHHH-HHHHHCCccccCcCcceEEE
Confidence                      2589999999999999999 9999754    455888765

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.18  E-value=6.7e-11  Score=92.20  Aligned_cols=91  Identities=14%  Similarity=0.031  Sum_probs=71.8

Q ss_pred             cchHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          10 RKETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPAN   89 (138)
Q Consensus        10 ~~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (138)
                      ..+...+.++++..+++.++||||+++++.+. +.+.+++||||+.+.+..++....                       
T Consensus        63 ~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~~~l~~~~~-----------------------  118 (318)
T 2dyl_A           63 NKEENKRILMDLDVVLKSHDCPYIVQCFGTFI-TNTDVFIAMELMGTCAEKLKKRMQ-----------------------  118 (318)
T ss_dssp             CHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEE-CSSEEEEEECCCSEEHHHHHHHHT-----------------------
T ss_pred             cchHHHHHHHHHHHHHHhcCCCceeeEEEEEe-cCCcEEEEEeccCCcHHHHHHHhc-----------------------
Confidence            44455667777778889999999999999776 467999999999777776665432                       


Q ss_pred             CCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCC-C----CcccCccee
Q psy3822          90 QSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVP-S----TYLPSSVAF  136 (138)
Q Consensus        90 ~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~-a----~~~~~~~~~  136 (138)
                                 ..+++.++..++.||++|| .|||+. .    .+.|++|.+
T Consensus       119 -----------~~~~~~~~~~~~~~i~~~l-~~lH~~~~i~H~dlkp~Nil~  158 (318)
T 2dyl_A          119 -----------GPIPERILGKMTVAIVKAL-YYLKEKHGVIHRDVKPSNILL  158 (318)
T ss_dssp             -----------SCCCHHHHHHHHHHHHHHH-HHHHHHHCCCCCCCCGGGEEE
T ss_pred             -----------cCCCHHHHHHHHHHHHHHH-HHHHhhCCEEeCCCCHHHEEE
Confidence                       2588999999999999999 999974 2    345777765

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.18  E-value=3.5e-11  Score=100.84  Aligned_cols=86  Identities=13%  Similarity=0.117  Sum_probs=71.0

Q ss_pred             HHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSAS   93 (138)
Q Consensus        15 ~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (138)
                      .+.+.+|+.+|++|+||||+++++.+.  .+.+++||||+. ++|.++|.....                          
T Consensus       227 ~~~~~~E~~~l~~l~h~~iv~l~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~--------------------------  278 (454)
T 1qcf_A          227 VEAFLAEANVMKTLQHDKLVKLHAVVT--KEPIYIITEFMAKGSLLDFLKSDEG--------------------------  278 (454)
T ss_dssp             HHHHHHHHHHHTTCCCTTBCCEEEEEC--SSSCEEEECCCTTCBHHHHHHSHHH--------------------------
T ss_pred             HHHHHHHHHHHhhCCCCCEeeEEEEEe--CCccEEEEeecCCCcHHHHHHhccC--------------------------
Confidence            467899999999999999999999664  467999999995 699999984321                          


Q ss_pred             CCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          94 RPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        94 ~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                             ..+++.++..++.||++|| +|||+..    .+.|++|.+
T Consensus       279 -------~~~~~~~~~~~~~qi~~~l-~~LH~~~ivHrDlkp~Nill  317 (454)
T 1qcf_A          279 -------SKQPLPKLIDFSAQIAEGM-AFIEQRNYIHRDLRAANILV  317 (454)
T ss_dssp             -------HTCCHHHHHHHHHHHHHHH-HHHHHTTCCCSSCSGGGEEE
T ss_pred             -------CCCCHHHHHHHHHHHHHHH-HHHHhCCccCCCCCHHHEEE
Confidence                   1477889999999999999 9999854    445777764

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.17  E-value=3e-11  Score=103.81  Aligned_cols=85  Identities=16%  Similarity=0.166  Sum_probs=70.4

Q ss_pred             HHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          16 EILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASR   94 (138)
Q Consensus        16 e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (138)
                      +.+.+|+.+|++|+||||+++++.+.+  +.+++||||+. ++|.++|.....                           
T Consensus       307 ~~~~~E~~~l~~l~hpniv~~~~~~~~--~~~~lv~e~~~~gsL~~~l~~~~~---------------------------  357 (535)
T 2h8h_A          307 EAFLQEAQVMKKLRHEKLVQLYAVVSE--EPIYIVTEYMSKGSLLDFLKGETG---------------------------  357 (535)
T ss_dssp             HHHHHHHHHHHHCCCTTBCCEEEEECS--SSCEEEECCCTTEEHHHHHSHHHH---------------------------
T ss_pred             HHHHHHHHHHHhCCCCCEeeEEEEEee--ccceEeeehhcCCcHHHHHhhcCC---------------------------
Confidence            568999999999999999999996653  67999999995 699999974321                           


Q ss_pred             CcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          95 PTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        95 ~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                            ..+++.++..++.||++|| +|||+..    .+.|++|.+
T Consensus       358 ------~~l~~~~~~~i~~qi~~~L-~~LH~~~ivHrDlkp~NIll  396 (535)
T 2h8h_A          358 ------KYLRLPQLVDMAAQIASGM-AYVERMNYVHRDLRAANILV  396 (535)
T ss_dssp             ------TTCCHHHHHHHHHHHHHHH-HHHHHTTCCCSCCSGGGEEE
T ss_pred             ------CCCCHHHHHHHHHHHHHHH-HHHHhCCeeCCCCCHhhEEE
Confidence                  1478899999999999999 9999754    445777764

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.17  E-value=6.3e-11  Score=92.88  Aligned_cols=86  Identities=16%  Similarity=0.098  Sum_probs=69.0

Q ss_pred             HHHHHHHHhhhC---CCCCeeEEeceeee----cCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          17 ILRLGVKQLEVY---RHPKILSVLHPIEE----CPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPAN   89 (138)
Q Consensus        17 ~lrrEi~~L~rL---rHPnIL~l~e~~ee----~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (138)
                      .+.+|+..|++|   +||||+++++.+..    ..+.+++||||+.++|.+++.....                      
T Consensus        57 ~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~----------------------  114 (326)
T 1blx_A           57 STIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPE----------------------  114 (326)
T ss_dssp             THHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEEEEEEECCSCBHHHHHHHSCT----------------------
T ss_pred             hhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCCceEEEEEecCCCCHHHHHHhccc----------------------
Confidence            456777777766   89999999997652    3458999999999999999985431                      


Q ss_pred             CCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          90 QSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        90 ~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                 ..+++.+++.++.||++|| .|||+..    .+.|++|.+
T Consensus       115 -----------~~~~~~~~~~~~~qi~~~l-~~lH~~gi~H~dlkp~Nili  153 (326)
T 1blx_A          115 -----------PGVPTETIKDMMFQLLRGL-DFLHSHRVVHRDLKPQNILV  153 (326)
T ss_dssp             -----------TCSCHHHHHHHHHHHHHHH-HHHHHTTCCCCCCCGGGEEE
T ss_pred             -----------CCCCHHHHHHHHHHHHHHH-HHHHHCCceeccCCHHHeEE
Confidence                       1488999999999999999 9999864    445888765

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.17  E-value=1.2e-10  Score=101.93  Aligned_cols=89  Identities=15%  Similarity=0.060  Sum_probs=74.2

Q ss_pred             HHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSAS   93 (138)
Q Consensus        15 ~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (138)
                      .+.+.+|+.+|++++||||+++++.++ +.+.+|+||||+. ++|.++|......                         
T Consensus       229 ~~~~~~E~~iL~~l~hp~Iv~l~~~~~-~~~~l~lVmE~~~gg~L~~~l~~~~~~-------------------------  282 (543)
T 3c4z_A          229 YQGAMVEKKILAKVHSRFIVSLAYAFE-TKTDLCLVMTIMNGGDIRYHIYNVDED-------------------------  282 (543)
T ss_dssp             HHHHHHHHHHHHHCCCTTBCCEEEEEE-CSSEEEEEECCCTTCBHHHHHHTSSTT-------------------------
T ss_pred             HHHHHHHHHHHHhcCCCCEeeEEEEEe-eCCEEEEEEEeccCCCHHHHHHHhhcc-------------------------
Confidence            467889999999999999999999776 5779999999995 7999999854311                         


Q ss_pred             CCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          94 RPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        94 ~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                            ...+++.+++.++.||+.|| +|||+..    .+.|++|.+
T Consensus       283 ------~~~l~e~~~~~~~~qi~~aL-~~LH~~gIvHrDLKP~NILl  322 (543)
T 3c4z_A          283 ------NPGFQEPRAIFYTAQIVSGL-EHLHQRNIIYRDLKPENVLL  322 (543)
T ss_dssp             ------SCSCCHHHHHHHHHHHHHHH-HHHHHTTEECCCCCGGGEEE
T ss_pred             ------cccccHHHHHHHHHHHHHHH-HHHHHcCCcccCCChHHEEE
Confidence                  12689999999999999999 9999854    455888764

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.17  E-value=3.6e-11  Score=100.39  Aligned_cols=92  Identities=14%  Similarity=0.093  Sum_probs=68.4

Q ss_pred             HHHHHHHHHHhhhC-CCCCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVY-RHPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSAS   93 (138)
Q Consensus        15 ~e~lrrEi~~L~rL-rHPnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (138)
                      .+.+.+|+.+|.++ +||||+++++.++ +.+.+|+||||+.++|.+++........                       
T Consensus        52 ~~~~~~E~~~l~~l~~HpnIv~~~~~~~-~~~~~~lv~E~~~gsL~~~l~~~~~~~~-----------------------  107 (434)
T 2rio_A           52 CDIALMEIKLLTESDDHPNVIRYYCSET-TDRFLYIALELCNLNLQDLVESKNVSDE-----------------------  107 (434)
T ss_dssp             HHHHHHHHHHHHHHTTSTTBCCEEEEEE-CSSEEEEEECCCSEEHHHHHHTC----------------------------
T ss_pred             HHHHHHHHHHHHhccCCCCcCeEEEEEe-cCCeEEEEEecCCCCHHHHHhccCCCch-----------------------
Confidence            46678999999986 8999999999665 5789999999999999999985432110                       


Q ss_pred             CCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          94 RPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        94 ~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                           ......+.++..++.||+.|| +|||+..    .+.|++|.+
T Consensus       108 -----~~~~~~~~~~~~i~~qi~~aL-~~LH~~~ivHrDLkp~NILl  148 (434)
T 2rio_A          108 -----NLKLQKEYNPISLLRQIASGV-AHLHSLKIIHRDLKPQNILV  148 (434)
T ss_dssp             ------------CCHHHHHHHHHHHH-HHHHHTTEECCCCSGGGEEE
T ss_pred             -----hhhhccchhHHHHHHHHHHHH-HHHHHCCccccCCChHhEEE
Confidence                 000134556788999999999 9999754    456888875

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.17  E-value=7.3e-12  Score=99.55  Aligned_cols=85  Identities=13%  Similarity=0.042  Sum_probs=70.3

Q ss_pred             HHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSAS   93 (138)
Q Consensus        15 ~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (138)
                      .+.+.+|+..|.+|+||||+++++.++  .+.+++||||+. ++|.+.+....                           
T Consensus        59 ~~~~~~e~~~l~~l~h~~iv~~~~~~~--~~~~~~v~e~~~~~~L~~~l~~~~---------------------------  109 (325)
T 3kex_A           59 FQAVTDHMLAIGSLDHAHIVRLLGLCP--GSSLQLVTQYLPLGSLLDHVRQHR---------------------------  109 (325)
T ss_dssp             BCSCCHHHHHHHTCCCTTBCCEEEEEC--BSSEEEEEECCTTCBSHHHHHSSG---------------------------
T ss_pred             HHHHHHHHHHHhcCCCCCcCeEEEEEc--CCccEEEEEeCCCCCHHHHHHHcc---------------------------
Confidence            355688999999999999999999664  356999999995 79999997432                           


Q ss_pred             CCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          94 RPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        94 ~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                             ..+++.++..++.||++|| +|||+..    .+.|++|.+
T Consensus       110 -------~~~~~~~~~~~~~qi~~~l-~~lH~~~ivH~Dikp~Nil~  148 (325)
T 3kex_A          110 -------GALGPQLLLNWGVQIAKGM-YYLEEHGMVHRNLAARNVLL  148 (325)
T ss_dssp             -------GGSCTTHHHHHHHHHHHHH-HHHHHTTCCCSCCSSTTEEE
T ss_pred             -------ccCCHHHHHHHHHHHHHHH-HHHHhCCCCCCccchheEEE
Confidence                   1578889999999999999 9999864    445888765

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.17  E-value=7.6e-11  Score=91.97  Aligned_cols=90  Identities=17%  Similarity=0.128  Sum_probs=74.9

Q ss_pred             hHHHHHHHHHHHHhhhCCCCC------eeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPK------ILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSP   85 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPn------IL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~   85 (138)
                      +...+.+++|+.+|++|+|||      |+++++.+++ .+.+++||||+.++|.+++.....                  
T Consensus        52 ~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~-~~~~~lv~e~~~~~l~~~l~~~~~------------------  112 (339)
T 1z57_A           52 DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEH-HGHICIVFELLGLSTYDFIKENGF------------------  112 (339)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEE-TTEEEEEEECCCCBHHHHHHHTTT------------------
T ss_pred             CchhHHHHHHHHHHHHhhhcCCCCceeeEeeeccccc-CCcEEEEEcCCCCCHHHHHHhcCC------------------
Confidence            345678899999999998776      9999997764 679999999998899999985431                  


Q ss_pred             CCCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          86 PPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        86 ~~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                     ..+++.+++.++.||++|| +|||+..    .+.|++|.+
T Consensus       113 ---------------~~~~~~~~~~~~~qi~~~l-~~lH~~~ivH~Dlkp~Nil~  151 (339)
T 1z57_A          113 ---------------LPFRLDHIRKMAYQICKSV-NFLHSNKLTHTDLKPENILF  151 (339)
T ss_dssp             ---------------CCCCHHHHHHHHHHHHHHH-HHHHHTTEECCCCCGGGEEE
T ss_pred             ---------------CCCcHHHHHHHHHHHHHHH-HHHHHCCCcCCCCCHHHEEE
Confidence                           1588899999999999999 9999864    455888865

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.16  E-value=4e-11  Score=99.15  Aligned_cols=86  Identities=17%  Similarity=0.260  Sum_probs=64.4

Q ss_pred             HHHHHHHHHHH-hhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQ-LEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        14 ~~e~lrrEi~~-L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      ..+.+.+|..+ |+.++||||+++++.++ +.+.+|+||||+. ++|.+++....                         
T Consensus        81 ~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~-~~~~~~lv~E~~~gg~L~~~l~~~~-------------------------  134 (373)
T 2r5t_A           81 EEKHIMSERNVLLKNVKHPFLVGLHFSFQ-TADKLYFVLDYINGGELFYHLQRER-------------------------  134 (373)
T ss_dssp             ----------CCBCCCCCTTBCCEEEEEE-CSSEEEEEEECCCSCBHHHHHHHHS-------------------------
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCCEEEEEE-eCCEEEEEEeCCCCCcHHHHHHhcC-------------------------
Confidence            34556677776 57799999999999776 4779999999995 69999998542                         


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                .+++.+++.++.||+.|| +|||+..    .+.|++|.+
T Consensus       135 ----------~~~~~~~~~~~~qi~~aL-~~LH~~givHrDlkp~NIll  172 (373)
T 2r5t_A          135 ----------CFLEPRARFYAAEIASAL-GYLHSLNIVYRDLKPENILL  172 (373)
T ss_dssp             ----------SCCHHHHHHHHHHHHHHH-HHHHHTTCCCCCCCGGGEEE
T ss_pred             ----------CCCHHHHHHHHHHHHHHH-HHHHHCCceecCCCHHHEEE
Confidence                      588999999999999999 9999754    445888765

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.16  E-value=4.9e-11  Score=95.45  Aligned_cols=92  Identities=15%  Similarity=0.093  Sum_probs=74.5

Q ss_pred             hHHHHHHHHHHHHhhhCC--------CCCeeEEeceeee---cCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYR--------HPKILSVLHPIEE---CPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGG   80 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLr--------HPnIL~l~e~~ee---~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~   80 (138)
                      +...+.+.+|+.+|++|+        ||||+++++.+..   +...+++||||+.++|.+.+.....             
T Consensus        74 ~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~-------------  140 (397)
T 1wak_A           74 EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNY-------------  140 (397)
T ss_dssp             HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTEEEEEEEECCCCCBHHHHHHHTTT-------------
T ss_pred             CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCCCceEEEEEeccCccHHHHHHhccc-------------
Confidence            345678899999999997        7889999997763   2458999999999888888874321             


Q ss_pred             CCCCCCCCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC-----CcccCcceee
Q psy3822          81 SGSSPPPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS-----TYLPSSVAFC  137 (138)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a-----~~~~~~~~~~  137 (138)
                                          ..+++.+++.++.||+.|| +|||+..     .+.|++|.+.
T Consensus       141 --------------------~~~~~~~~~~i~~qi~~aL-~~lH~~~givHrDikp~NIll~  181 (397)
T 1wak_A          141 --------------------QGLPLPCVKKIIQQVLQGL-DYLHTKCRIIHTDIKPENILLS  181 (397)
T ss_dssp             --------------------SCCCHHHHHHHHHHHHHHH-HHHHHTTCEECCCCSGGGEEEC
T ss_pred             --------------------CCCCHHHHHHHHHHHHHHH-HHHHHhCCEecCCCCHHHeeEe
Confidence                                1588999999999999999 9999874     3458888763

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.16  E-value=9.6e-11  Score=90.42  Aligned_cols=86  Identities=14%  Similarity=0.073  Sum_probs=72.8

Q ss_pred             HHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          16 EILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASRP   95 (138)
Q Consensus        16 e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   95 (138)
                      +.+.+|+.+|++|+||+++..+..+.+..+.+++||||+.++|.+++....                             
T Consensus        49 ~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~-----------------------------   99 (296)
T 3uzp_A           49 PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCS-----------------------------   99 (296)
T ss_dssp             CHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECCCCBHHHHHHHTT-----------------------------
T ss_pred             hHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEecCCCHHHHHHhhc-----------------------------
Confidence            357899999999999998888776766678999999999889999997432                             


Q ss_pred             cccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          96 THAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        96 ~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                           ..+++.++..++.||++|| +|||+..    .+.|++|.+
T Consensus       100 -----~~~~~~~~~~i~~qi~~~l-~~lH~~~ivH~dlkp~NIl~  138 (296)
T 3uzp_A          100 -----RKFSLKTVLLLADQMISRI-EYIHSKNFIHRDVKPDNFLM  138 (296)
T ss_dssp             -----TCCCHHHHHHHHHHHHHHH-HHHHHTTEECSCCCGGGEEE
T ss_pred             -----cCCCHHHHHHHHHHHHHHH-HHHHhCCeeeCCCCHHHeEE
Confidence                 1588999999999999999 9999864    556888876

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.15  E-value=1e-10  Score=89.98  Aligned_cols=86  Identities=14%  Similarity=0.073  Sum_probs=73.5

Q ss_pred             HHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          16 EILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASRP   95 (138)
Q Consensus        16 e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   95 (138)
                      +.+.+|+.+|++|+||+++..+..+.+..+..++||||+.++|.+++....                             
T Consensus        49 ~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~-----------------------------   99 (296)
T 4hgt_A           49 PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCS-----------------------------   99 (296)
T ss_dssp             CCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECCCCBHHHHHHHTT-----------------------------
T ss_pred             hHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEccCCCHHHHHHHhc-----------------------------
Confidence            457899999999999999888887777788999999999889999998532                             


Q ss_pred             cccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          96 THAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        96 ~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                           ..+++.++..++.||++|| +|||+..    .+.|++|.+
T Consensus       100 -----~~~~~~~~~~i~~qi~~~l-~~LH~~~ivH~Dlkp~NIl~  138 (296)
T 4hgt_A          100 -----RKFSLKTVLLLADQMISRI-EYIHSKNFIHRDVKPDNFLM  138 (296)
T ss_dssp             -----SCCCHHHHHHHHHHHHHHH-HHHHHTTEECSCCSGGGEEE
T ss_pred             -----CCCCHHHHHHHHHHHHHHH-HHHHHCCeecCCCCHHHeee
Confidence                 1588999999999999999 9999864    456888875

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.15  E-value=1e-10  Score=92.09  Aligned_cols=83  Identities=17%  Similarity=0.261  Sum_probs=69.9

Q ss_pred             HHHHHHHHHhhhCC-CCCeeEEeceeeec-CCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          16 EILRLGVKQLEVYR-HPKILSVLHPIEEC-PDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        16 e~lrrEi~~L~rLr-HPnIL~l~e~~ee~-~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      +.+++|+.+|++|+ ||||+++++.+.+. ...+++||||+. ++|.+++.                             
T Consensus        75 ~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~-----------------------------  125 (330)
T 3nsz_A           75 KKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ-----------------------------  125 (330)
T ss_dssp             HHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEECCCCCCHHHHGG-----------------------------
T ss_pred             HHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEeccCchhHHHHHH-----------------------------
Confidence            66899999999998 99999999977653 457999999996 68888875                             


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcceee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAFC  137 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~~  137 (138)
                               .+++.+++.++.||++|| +|||+..    .+.|++|.+.
T Consensus       126 ---------~~~~~~~~~~~~qi~~~l-~~lH~~~ivH~Dikp~Nil~~  164 (330)
T 3nsz_A          126 ---------TLTDYDIRFYMYEILKAL-DYCHSMGIMHRDVKPHNVMID  164 (330)
T ss_dssp             ---------GCCHHHHHHHHHHHHHHH-HHHHHTTEECCCCSGGGEEEE
T ss_pred             ---------hCCHHHHHHHHHHHHHHH-HHHHhCCeeeCCCCHHHEEEc
Confidence                     478889999999999999 9999754    4558887653

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.14  E-value=7.2e-11  Score=98.15  Aligned_cols=87  Identities=11%  Similarity=0.041  Sum_probs=68.6

Q ss_pred             HHHHHHHhhhCCCCCeeEEeceeeec---C--CeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          18 LRLGVKQLEVYRHPKILSVLHPIEEC---P--DALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        18 lrrEi~~L~rLrHPnIL~l~e~~ee~---~--~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ..+|+.+|++|+||||+++++.+...   .  ..+++||||+.++|.+++......                        
T Consensus        94 ~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~------------------------  149 (420)
T 1j1b_A           94 KNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA------------------------  149 (420)
T ss_dssp             CCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEEECCCEEHHHHHHHHHHT------------------------
T ss_pred             HHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEeehhcccccHHHHHHHHhhc------------------------
Confidence            35899999999999999998876432   1  258899999998888888643211                        


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                             ...+++.+++.++.||++|| +|||+..    .+.|++|.+
T Consensus       150 -------~~~l~~~~~~~~~~qi~~aL-~~LH~~~ivHrDlkp~NILl  189 (420)
T 1j1b_A          150 -------KQTLPVIYVKLYMYQLFRSL-AYIHSFGICHRDIKPQNLLL  189 (420)
T ss_dssp             -------TCCCCHHHHHHHHHHHHHHH-HHHHTTTEECSCCSGGGEEE
T ss_pred             -------cCCCCHHHHHHHHHHHHHHH-HHHHHCCccccCCChhhEEE
Confidence                   12689999999999999999 9999854    455888765

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.14  E-value=5e-11  Score=104.86  Aligned_cols=89  Identities=15%  Similarity=0.093  Sum_probs=70.2

Q ss_pred             cchHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCC----eEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCC
Q psy3822          10 RKETVTEILRLGVKQLEVYRHPKILSVLHPIEECPD----ALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSS   84 (138)
Q Consensus        10 ~~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~----~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~   84 (138)
                      ......+.+.+|+.+|.+|+||||+++++.+++...    .+|+||||+. ++|.+.+..                    
T Consensus       118 ~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~~lv~E~~~g~~L~~~~~~--------------------  177 (681)
T 2pzi_A          118 GDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQ--------------------  177 (681)
T ss_dssp             CCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEEEEEEECCCCEECC----C--------------------
T ss_pred             CCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCceeEEEEEeCCCCcHHHHHhC--------------------
Confidence            334566788999999999999999999998876433    2799999996 688766541                    


Q ss_pred             CCCCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          85 PPPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                       .+++.++..++.||++|| +|||+..    .+.|++|.+
T Consensus       178 -----------------~l~~~~~~~~~~qi~~aL-~~lH~~giiHrDlkp~NIll  215 (681)
T 2pzi_A          178 -----------------KLPVAEAIAYLLEILPAL-SYLHSIGLVYNDLKPENIML  215 (681)
T ss_dssp             -----------------CCCHHHHHHHHHHHHHHH-HHHHHTTEECCCCSGGGEEE
T ss_pred             -----------------CCCHHHHHHHHHHHHHHH-HHHHHCCCeecccChHHeEE
Confidence                             488899999999999999 9999864    455888875

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.14  E-value=4.6e-11  Score=96.76  Aligned_cols=86  Identities=16%  Similarity=0.162  Sum_probs=72.2

Q ss_pred             HHHHHHHHHHHhhhC-CCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVY-RHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        14 ~~e~lrrEi~~L~rL-rHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      ..+.+++|+.+|.+| .||||+++++.+++ .+.+++||||+. ++|.+++....                         
T Consensus       101 ~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~-------------------------  154 (355)
T 1vzo_A          101 TTEHTRTERQVLEHIRQSPFLVTLHYAFQT-ETKLHLILDYINGGELFTHLSQRE-------------------------  154 (355)
T ss_dssp             SGGGCCCHHHHHHHHHTCTTBCCEEEEEEE-TTEEEEEECCCCSCBHHHHHHHHS-------------------------
T ss_pred             HHHHHHHHHHHHHHccCCCceeEEEEEEee-CceEEEEeecCCCCCHHHHHHHcC-------------------------
Confidence            345678899999999 59999999997764 678999999996 69999998543                         


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                .+++.+++.++.||++|| .|||+..    .+.|++|.+
T Consensus       155 ----------~~~~~~~~~~~~qi~~aL-~~LH~~~ivH~Dlkp~NIll  192 (355)
T 1vzo_A          155 ----------RFTEHEVQIYVGEIVLAL-EHLHKLGIIYRDIKLENILL  192 (355)
T ss_dssp             ----------CCCHHHHHHHHHHHHHHH-HHHHHTTCCCCCCCGGGEEE
T ss_pred             ----------CCCHHHHHHHHHHHHHHH-HHHHHCCcccCCCCHHHEEE
Confidence                      588999999999999999 9999754    445888765

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.14  E-value=8.7e-11  Score=96.74  Aligned_cols=86  Identities=14%  Similarity=0.118  Sum_probs=67.8

Q ss_pred             HHHHHHhhhCCCCCeeEEeceeeecCC-----eEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          19 RLGVKQLEVYRHPKILSVLHPIEECPD-----ALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSAS   93 (138)
Q Consensus        19 rrEi~~L~rLrHPnIL~l~e~~ee~~~-----~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (138)
                      .+|+.+|++|+||||+++++.+.....     .+++||||+.+++.+.+......                         
T Consensus        80 ~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~-------------------------  134 (394)
T 4e7w_A           80 NRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKL-------------------------  134 (394)
T ss_dssp             CHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEEECCSEEHHHHHHHHHHT-------------------------
T ss_pred             HHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEeeccCccHHHHHHHHHhh-------------------------
Confidence            479999999999999999998764322     48999999988777666532211                         


Q ss_pred             CCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          94 RPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        94 ~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                            ...+++.+++.++.||+.|| +|||+..    .+.|++|.+
T Consensus       135 ------~~~~~~~~~~~~~~qi~~aL-~~LH~~~ivHrDlkp~Nill  174 (394)
T 4e7w_A          135 ------KQTMPMLLIKLYMYQLLRSL-AYIHSIGICHRDIKPQNLLL  174 (394)
T ss_dssp             ------TSCCCHHHHHHHHHHHHHHH-HHHHHTTEECSCCSGGGEEE
T ss_pred             ------cCCCCHHHHHHHHHHHHHHH-HHHHHCCccCCCCCHHHEEE
Confidence                  12689999999999999999 9999854    456888765

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.14  E-value=1.3e-10  Score=91.84  Aligned_cols=89  Identities=10%  Similarity=0.017  Sum_probs=68.9

Q ss_pred             HHHHHHHH-HhhhCCCCCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          16 EILRLGVK-QLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASR   94 (138)
Q Consensus        16 e~lrrEi~-~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (138)
                      ..+.+|+. +++.++||||+++++.+.+ .+.+++||||+.++|.+++......                          
T Consensus        65 ~~~~~e~~~~~~~~~h~niv~~~~~~~~-~~~~~lv~e~~~~~l~~~~~~~~~~--------------------------  117 (327)
T 3aln_A           65 KQLLMDLDVVMRSSDCPYIVQFYGALFR-EGDCWICMELMSTSFDKFYKYVYSV--------------------------  117 (327)
T ss_dssp             HHHHHHHHHHHSSCCCTTBCCEEEEEEC-SSEEEEEECCCSEEHHHHHHHHHHT--------------------------
T ss_pred             HHHHHHHHHHHHcCCCCcEeeeeeEEEe-CCceEEEEeecCCChHHHHHHHHhh--------------------------
Confidence            44445555 7788999999999997764 6789999999999999998753211                          


Q ss_pred             CcccccCCccHHHHHHHHHHHHHHHHhhhcCCC-----CcccCccee
Q psy3822          95 PTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS-----TYLPSSVAF  136 (138)
Q Consensus        95 ~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a-----~~~~~~~~~  136 (138)
                          ....+++..+..++.||+.|| .|||+..     .+.|++|.+
T Consensus       118 ----~~~~~~~~~~~~i~~~i~~~l-~~lH~~~~ivH~dlkp~NIll  159 (327)
T 3aln_A          118 ----LDDVIPEEILGKITLATVKAL-NHLKENLKIIHRDIKPSNILL  159 (327)
T ss_dssp             ----TCCCCCHHHHHHHHHHHHHHH-HHHHHHHSCCCSCCCGGGEEE
T ss_pred             ----hcccCcHHHHHHHHHHHHHHH-HHHhccCCEeECCCCHHHEEE
Confidence                012588999999999999999 9999863     334777765

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.13  E-value=1.8e-10  Score=92.77  Aligned_cols=89  Identities=7%  Similarity=-0.028  Sum_probs=72.4

Q ss_pred             HHHHHHHHHhhhCC---CCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          16 EILRLGVKQLEVYR---HPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        16 e~lrrEi~~L~rLr---HPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      +.+.+|+..+.+|+   ||||+++++.+.+ .+.+++||||+. ++|.+++.......                      
T Consensus       109 ~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~----------------------  165 (365)
T 3e7e_A          109 WEFYIGTQLMERLKPSMQHMFMKFYSAHLF-QNGSVLVGELYSYGTLLNAINLYKNTP----------------------  165 (365)
T ss_dssp             HHHHHHHHHHHHSCGGGGGGBCCEEEEEEC-SSCEEEEECCCCSCBHHHHHHHHHTST----------------------
T ss_pred             hHHHHHHHHHHHhhhhhhhhhhhhheeeec-CCCcEEEEeccCCCcHHHHHHHhhccc----------------------
Confidence            45678888888887   9999999997764 678999999995 79999998643211                      


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                              ...+++.++..++.||++|| +|||+..    .+.|++|.+
T Consensus       166 --------~~~l~~~~~~~i~~qi~~~L-~~lH~~~ivHrDiKp~NIll  205 (365)
T 3e7e_A          166 --------EKVMPQGLVISFAMRMLYMI-EQVHDCEIIHGDIKPDNFIL  205 (365)
T ss_dssp             --------TCSCCHHHHHHHHHHHHHHH-HHHHTTTEECCCCSGGGEEE
T ss_pred             --------ccCCCHHHHHHHHHHHHHHH-HHHhhCCeecCCCCHHHEEe
Confidence                    12699999999999999999 9999854    455888865

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.13  E-value=2.2e-10  Score=88.62  Aligned_cols=84  Identities=14%  Similarity=0.065  Sum_probs=65.1

Q ss_pred             HHHHHHHHHhhh--CCCCCeeEEeceeeec---CCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          16 EILRLGVKQLEV--YRHPKILSVLHPIEEC---PDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPAN   89 (138)
Q Consensus        16 e~lrrEi~~L~r--LrHPnIL~l~e~~ee~---~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (138)
                      +...+|..++..  ++||||+++++.+.+.   .+.+++||||+. ++|.+++...                        
T Consensus        45 ~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~------------------------  100 (301)
T 3q4u_A           45 KSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLT------------------------  100 (301)
T ss_dssp             HHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEECCCTTCBHHHHHTTC------------------------
T ss_pred             hhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEehhhccCCCHHHHHhhc------------------------
Confidence            344556666655  8999999999875432   347999999996 6999999521                        


Q ss_pred             CCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcC------------CCCcccCccee
Q psy3822          90 QSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYV------------PSTYLPSSVAF  136 (138)
Q Consensus        90 ~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~------------~a~~~~~~~~~  136 (138)
                                  .+++.++..++.||++|| +|||.            +..+.|++|.+
T Consensus       101 ------------~~~~~~~~~i~~~i~~~l-~~lH~~~~~~~~~~~ivH~Dlkp~Nill  146 (301)
T 3q4u_A          101 ------------TLDTVSCLRIVLSIASGL-AHLHIEIFGTQGKPAIAHRDLKSKNILV  146 (301)
T ss_dssp             ------------CBCHHHHHHHHHHHHHHH-HHHHSCBCSTTCBCEEECSCCCGGGEEE
T ss_pred             ------------ccCHHHHHHHHHHHHHHH-HHHHHhhhhccCCCCeecCCCChHhEEE
Confidence                        588899999999999999 99993            23455888765

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.12  E-value=3e-10  Score=89.55  Aligned_cols=84  Identities=12%  Similarity=-0.010  Sum_probs=68.5

Q ss_pred             HHHHHHHHHhhh--CCCCCeeEEeceeeecC---CeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          16 EILRLGVKQLEV--YRHPKILSVLHPIEECP---DALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPAN   89 (138)
Q Consensus        16 e~lrrEi~~L~r--LrHPnIL~l~e~~ee~~---~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (138)
                      +.+.+|+.++.+  ++||||+++++.+.+..   ..+++||||+. ++|.+++...                        
T Consensus        79 ~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~------------------------  134 (342)
T 1b6c_B           79 RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY------------------------  134 (342)
T ss_dssp             HHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEEECCCTTCBHHHHHHHC------------------------
T ss_pred             HHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEEEeecCCCcHHHHHhcc------------------------
Confidence            556788998887  89999999999776543   27999999996 5999999742                        


Q ss_pred             CCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcC------------CCCcccCccee
Q psy3822          90 QSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYV------------PSTYLPSSVAF  136 (138)
Q Consensus        90 ~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~------------~a~~~~~~~~~  136 (138)
                                  .+++.++..++.||+.|| .|||.            +..+.|++|.+
T Consensus       135 ------------~~~~~~~~~i~~~i~~~l-~~lH~~~~~~~~~~~ivH~Dlkp~NIll  180 (342)
T 1b6c_B          135 ------------TVTVEGMIKLALSTASGL-AHLHMEIVGTQGKPAIAHRDLKSKNILV  180 (342)
T ss_dssp             ------------CBCHHHHHHHHHHHHHHH-HHHHCCBCSTTCBCEEECSCCSGGGEEE
T ss_pred             ------------CccHHHHHHHHHHHHHHH-HHHHHHHhhhcccCCeeeCCCCHHHEEE
Confidence                        478899999999999999 99993            22445888765

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.10  E-value=5.1e-12  Score=100.66  Aligned_cols=88  Identities=9%  Similarity=-0.121  Sum_probs=63.8

Q ss_pred             HHHHHHHHHHHHhhhCC---------CCCeeEEec-----------------eeee------------cCCeEEEEeccc
Q psy3822          13 TVTEILRLGVKQLEVYR---------HPKILSVLH-----------------PIEE------------CPDALAFATEPV   54 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLr---------HPnIL~l~e-----------------~~ee------------~~~~L~fVtE~V   54 (138)
                      ...+.+.+|+.+|++|+         ||||+++.+                 .+++            ..+.+|+||||+
T Consensus        65 ~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~  144 (336)
T 2vuw_A           65 KTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFE  144 (336)
T ss_dssp             BCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEE
T ss_pred             hhHHHHHHHHHHHHHHHHhhccccccCCchhhhcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEec
Confidence            34577899999999986         555555544                 3332            257899999999


Q ss_pred             c-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhc-C----CCC
Q psy3822          55 Y-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLY-V----PST  128 (138)
Q Consensus        55 ~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH-~----~a~  128 (138)
                      . +++.+.+.+                                    ..+++.+++.++.||+.|| +||| +    +..
T Consensus       145 ~~g~ll~~~~~------------------------------------~~~~~~~~~~i~~qi~~aL-~~lH~~~~ivHrD  187 (336)
T 2vuw_A          145 FGGIDLEQMRT------------------------------------KLSSLATAKSILHQLTASL-AVAEASLRFEHRD  187 (336)
T ss_dssp             CCCEETGGGTT------------------------------------TCCCHHHHHHHHHHHHHHH-HHHHHHHCCBCSC
T ss_pred             CCCccHHHHHh------------------------------------cCCCHHHHHHHHHHHHHHH-HHHHHhCCEeECC
Confidence            5 555444431                                    1578999999999999999 9999 4    335


Q ss_pred             cccCcceee
Q psy3822         129 YLPSSVAFC  137 (138)
Q Consensus       129 ~~~~~~~~~  137 (138)
                      +.|++|.+.
T Consensus       188 lKp~NILl~  196 (336)
T 2vuw_A          188 LHWGNVLLK  196 (336)
T ss_dssp             CCGGGEEEE
T ss_pred             CCHHHEEEe
Confidence            568888753

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.10  E-value=7.9e-11  Score=93.82  Aligned_cols=89  Identities=11%  Similarity=0.123  Sum_probs=72.1

Q ss_pred             HHHHHHHHHHHHhhhCC-CCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYR-HPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLr-HPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      ...+.+.+|+.+|.+++ ||||+++++.++ +.+.+++||||+. ++|.+++....                        
T Consensus        70 ~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~------------------------  124 (327)
T 3lm5_A           70 DCRAEILHEIAVLELAKSCPRVINLHEVYE-NTSEIILILEYAAGGEIFSLCLPEL------------------------  124 (327)
T ss_dssp             ECHHHHHHHHHHHHHTTTCTTBCCEEEEEE-CSSEEEEEEECCTTEEGGGGGSSCC------------------------
T ss_pred             HHHHHHHHHHHHHHhccCCCCEEEEEEEEE-eCCeEEEEEEecCCCcHHHHHHHhc------------------------
Confidence            34567899999999995 699999999776 4778999999996 59988875321                        


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                               ...+++.+++.++.||+.|| +|||+..    .+.|++|.+
T Consensus       125 ---------~~~~~~~~~~~i~~ql~~~L-~~LH~~givH~Dikp~NIl~  164 (327)
T 3lm5_A          125 ---------AEMVSENDVIRLIKQILEGV-YYLHQNNIVHLDLKPQNILL  164 (327)
T ss_dssp             ----------CCCCHHHHHHHHHHHHHHH-HHHHHTTEECSCCCGGGEEE
T ss_pred             ---------ccCCCHHHHHHHHHHHHHHH-HHHHHCCeecCcCChHHEEE
Confidence                     12589999999999999999 9999764    445888765

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.07  E-value=8.4e-10  Score=86.60  Aligned_cols=81  Identities=15%  Similarity=0.010  Sum_probs=64.1

Q ss_pred             HHHHHHhhhCCCCCeeEEeceeeecC---CeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          19 RLGVKQLEVYRHPKILSVLHPIEECP---DALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASR   94 (138)
Q Consensus        19 rrEi~~L~rLrHPnIL~l~e~~ee~~---~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (138)
                      ..|+..+..++||||+++++.+.+..   +.+++||||+. ++|.+++...                             
T Consensus        79 e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~-----------------------------  129 (337)
T 3mdy_A           79 ETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKST-----------------------------  129 (337)
T ss_dssp             HHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEEECCCTTCBHHHHHHHC-----------------------------
T ss_pred             HHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEEEeccCCCcHHHHhhcc-----------------------------
Confidence            34444445569999999999776542   58999999995 5999999732                             


Q ss_pred             CcccccCCccHHHHHHHHHHHHHHHHhhhcCCC------------CcccCccee
Q psy3822          95 PTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS------------TYLPSSVAF  136 (138)
Q Consensus        95 ~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a------------~~~~~~~~~  136 (138)
                             .+++.++..++.||+.|| +|||+..            .+.|++|.+
T Consensus       130 -------~~~~~~~~~i~~~i~~~l-~~lH~~~~~~~~~~~ivH~Dikp~Nill  175 (337)
T 3mdy_A          130 -------TLDAKSMLKLAYSSVSGL-CHLHTEIFSTQGKPAIAHRDLKSKNILV  175 (337)
T ss_dssp             -------CBCHHHHHHHHHHHHHHH-HHHHSCBCSTTCBCCEECSCCCGGGEEE
T ss_pred             -------CCCHHHHHHHHHHHHHHH-HHHHHhhhhhccCCCEEecccchHHEEE
Confidence                   488899999999999999 9999762            345888765

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.07  E-value=1.6e-10  Score=104.16  Aligned_cols=94  Identities=17%  Similarity=0.149  Sum_probs=75.4

Q ss_pred             cchHHHHHHHHHHHHhhhCCCCCeeEEeceeee-----cCCeEEEEeccc-cccHHHHHhhcCCCCCCCCCCCCCCCCCC
Q psy3822          10 RKETVTEILRLGVKQLEVYRHPKILSVLHPIEE-----CPDALAFATEPV-YASLASILAFQESPAPNHSTNPVTGGSGS   83 (138)
Q Consensus        10 ~~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee-----~~~~L~fVtE~V-~~sL~~~L~~~~~~~~~~~~~~~~~~~~~   83 (138)
                      ......+.+.+|+.+|++|+||||+++++.++.     ..+..++||||+ .++|.+++......               
T Consensus        51 ~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~~LVmEy~~ggsL~~~L~~~~~~---------------  115 (676)
T 3qa8_A           51 LSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENC---------------  115 (676)
T ss_dssp             CCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSCCCEEECCSSCBHHHHHHSSSCT---------------
T ss_pred             CCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeEEEEEEeCCCCCHHHHHHhcccC---------------
Confidence            345566888999999999999999999986543     256789999999 57999999854321               


Q ss_pred             CCCCCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          84 SPPPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                       ..+++.+++.++.||+.|| .|||+..    .+.|++|.+
T Consensus       116 -----------------~~lse~~i~~I~~QLl~aL-~yLHs~gIVHrDLKP~NILl  154 (676)
T 3qa8_A          116 -----------------CGLKEGPIRTLLSDISSAL-RYLHENRIIHRDLKPENIVL  154 (676)
T ss_dssp             -----------------TCCCSSHHHHHHHHHHHHH-HHHHHTTBCCCCCCSTTEEE
T ss_pred             -----------------CCCCHHHHHHHHHHHHHHH-HHHHHCCCccCCCCHHHeEe
Confidence                             1578889999999999999 9999854    445888765

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.06  E-value=5.6e-10  Score=87.79  Aligned_cols=89  Identities=12%  Similarity=0.067  Sum_probs=74.0

Q ss_pred             HHHHHHHHHHHHhhhCCCCC------eeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPK------ILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPP   86 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPn------IL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~   86 (138)
                      ...+.+++|+.+|++|+||+      |+.+++.++. .+.+++||||+.++|.+.+.....                   
T Consensus        58 ~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~-~~~~~lv~e~~~~~l~~~l~~~~~-------------------  117 (355)
T 2eu9_A           58 KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNF-HGHMCIAFELLGKNTFEFLKENNF-------------------  117 (355)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEE-TTEEEEEEECCCCBHHHHHHHTTT-------------------
T ss_pred             cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeee-CCeEEEEEeccCCChHHHHHhccC-------------------
Confidence            45678899999999999887      8999887664 679999999999899888875431                   


Q ss_pred             CCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          87 PANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        87 ~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                    ..+++.+++.++.||+.|| +|||+..    .+.|++|.+
T Consensus       118 --------------~~~~~~~~~~i~~qi~~~L-~~lH~~~ivH~Dlkp~NIll  156 (355)
T 2eu9_A          118 --------------QPYPLPHVRHMAYQLCHAL-RFLHENQLTHTDLKPENILF  156 (355)
T ss_dssp             --------------CCCCHHHHHHHHHHHHHHH-HHHHTTTEECCCCCGGGEEE
T ss_pred             --------------CCCCHHHHHHHHHHHHHHH-HHHHHCCcccCCCCHHHEEE
Confidence                          1588999999999999999 9999864    455888876

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.04  E-value=3.8e-10  Score=89.93  Aligned_cols=90  Identities=18%  Similarity=0.094  Sum_probs=73.7

Q ss_pred             HHHHHHHHHHHHhhhCC-----------CCCeeEEeceeeecC---CeEEEEeccccccHHHHHhhcCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYR-----------HPKILSVLHPIEECP---DALAFATEPVYASLASILAFQESPAPNHSTNPVT   78 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLr-----------HPnIL~l~e~~ee~~---~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~   78 (138)
                      ...+.+.+|+.+|++|+           ||||+++++.+....   ..+++|||++.++|.+++.....           
T Consensus        57 ~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~-----------  125 (373)
T 1q8y_A           57 VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEH-----------  125 (373)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTEEEEEEEECCCCEEHHHHHHHTTT-----------
T ss_pred             cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhccCCCCceEEEEEecCCCCHHHHHHHhhc-----------
Confidence            34577899999999987           899999999877532   27999999998899999986431           


Q ss_pred             CCCCCCCCCCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC-----CcccCccee
Q psy3822          79 GGSGSSPPPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS-----TYLPSSVAF  136 (138)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a-----~~~~~~~~~  136 (138)
                                            ..+++.+++.++.||+.|| +|||+..     .+.|++|.+
T Consensus       126 ----------------------~~~~~~~~~~i~~qi~~aL-~~lH~~~~ivH~Dikp~NIll  165 (373)
T 1q8y_A          126 ----------------------RGIPLIYVKQISKQLLLGL-DYMHRRCGIIHTDIKPENVLM  165 (373)
T ss_dssp             ----------------------SCCCHHHHHHHHHHHHHHH-HHHHHTTCEECSCCSGGGEEE
T ss_pred             ----------------------cCCcHHHHHHHHHHHHHHH-HHHHhcCCEEecCCChHHeEE
Confidence                                  1488899999999999999 9999874     344888765

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.02  E-value=7e-10  Score=98.48  Aligned_cols=86  Identities=15%  Similarity=0.117  Sum_probs=73.2

Q ss_pred             HHHHHHHHHHHhhhC-CCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVY-RHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        14 ~~e~lrrEi~~L~rL-rHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      ..+.+.+|..+|.++ +||||++++..++ +.+.+||||||+. ++|.++|....                         
T Consensus       384 ~~~~~~~E~~~l~~~~~~~~i~~l~~~~~-~~~~~~lV~E~~~gg~L~~~l~~~~-------------------------  437 (674)
T 3pfq_A          384 DVECTMVEKRVLALPGKPPFLTQLHSCFQ-TMDRLYFVMEYVNGGDLMYHIQQVG-------------------------  437 (674)
T ss_dssp             TTHHHHHHHHHHTCTTCCTTBCCEEEECB-CSSEEEEEEECCCSCBHHHHHHHHS-------------------------
T ss_pred             HHHHHHHHHHHHHhccCCCeEEEEEEEEE-eCCEEEEEEeCcCCCcHHHHHHhcC-------------------------
Confidence            346778999999987 7999999999776 5789999999995 69999998543                         


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                .|+|.+++.++.||+.|| +|||+..    .+.|++|.+
T Consensus       438 ----------~~~~~~~~~~~~qi~~aL-~~LH~~gIiHrDLKp~NILl  475 (674)
T 3pfq_A          438 ----------RFKEPHAVFYAAEIAIGL-FFLQSKGIIYRDLKLDNVML  475 (674)
T ss_dssp             ----------SCCHHHHHHHHHHHHHHH-HHHHHTSEECCCCCSTTEEE
T ss_pred             ----------CCCHHHHHHHHHHHHHHH-HHHHhCCeEeccCChhhEEE
Confidence                      589999999999999999 9999864    455888765

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.02  E-value=1.3e-09  Score=86.64  Aligned_cols=90  Identities=19%  Similarity=0.031  Sum_probs=68.5

Q ss_pred             HHHHHHHHHhhhCCCCCeeEEeceeeecCC------eEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          16 EILRLGVKQLEVYRHPKILSVLHPIEECPD------ALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPAN   89 (138)
Q Consensus        16 e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~------~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (138)
                      +...++++.|.+|+||||+++++.+.+...      .+++||||+.++|.+.+......                     
T Consensus        64 ~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~---------------------  122 (360)
T 3e3p_A           64 NRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRR---------------------  122 (360)
T ss_dssp             CHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEEEEEEECCSCBHHHHHHHHHTT---------------------
T ss_pred             HHHHHHHHHHHhcCCCCcccHHHhhhccccccccceeEEEEeecccccHHHHHHHHhhc---------------------
Confidence            345678888999999999999998764322      38999999998888777642211                     


Q ss_pred             CCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhc--CCC----CcccCcceee
Q psy3822          90 QSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLY--VPS----TYLPSSVAFC  137 (138)
Q Consensus        90 ~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH--~~a----~~~~~~~~~~  137 (138)
                                ...+++..++.++.||+.|| .|||  +..    .+.|++|.+.
T Consensus       123 ----------~~~~~~~~~~~~~~qi~~al-~~lH~~~~~ivH~Dlkp~NIll~  165 (360)
T 3e3p_A          123 ----------QVAPPPILIKVFLFQLIRSI-GCLHLPSVNVCHRDIKPHNVLVN  165 (360)
T ss_dssp             ----------TCCCCHHHHHHHHHHHHHHH-HHHTSTTTCCBCSCCCGGGEEEE
T ss_pred             ----------ccCCCHHHHHHHHHHHHHHH-HHHhCCCCCeecCcCCHHHEEEe
Confidence                      12588899999999999999 9999  422    4458888763

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.01  E-value=1.4e-09  Score=90.84  Aligned_cols=89  Identities=9%  Similarity=0.043  Sum_probs=73.5

Q ss_pred             HHHHHHHHHHHHhhhC------CCCCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVY------RHPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPP   86 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rL------rHPnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~   86 (138)
                      ...+.+.+|+.+|++|      .||||+++++.+.. .+.+++|||++.++|.+++.....                   
T Consensus       135 ~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~-~~~~~lv~e~~~~~L~~~l~~~~~-------------------  194 (429)
T 3kvw_A          135 RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTF-RNHICMTFELLSMNLYELIKKNKF-------------------  194 (429)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEE-TTEEEEEECCCCCBHHHHHHHTTT-------------------
T ss_pred             chHHHHHHHHHHHHHHhhccccCCcCEEEEEeeccc-CCeEEEEEeccCCCHHHHHHhccC-------------------
Confidence            4456778899999887      57799999997764 679999999999999999986431                   


Q ss_pred             CCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          87 PANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        87 ~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                    ..+++.+++.++.||+.|| +|||+..    .+.|++|.+
T Consensus       195 --------------~~~~~~~~~~i~~qi~~aL-~~LH~~~ivHrDlKp~NILl  233 (429)
T 3kvw_A          195 --------------QGFSLPLVRKFAHSILQCL-DALHKNRIIHCDLKPENILL  233 (429)
T ss_dssp             --------------CCCCHHHHHHHHHHHHHHH-HHHHHHTEECSCCSGGGEEE
T ss_pred             --------------CCCCHHHHHHHHHHHHHHH-HHHHHCCeecCCCCHHHeEE
Confidence                          1488999999999999999 9999753    556888765

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.01  E-value=3.3e-10  Score=91.65  Aligned_cols=96  Identities=9%  Similarity=-0.059  Sum_probs=57.2

Q ss_pred             chHHHHHHHHHHHHhhhC--CCCCeeEEecee-------eecC----------------CeEEEEeccccccHHHHHhhc
Q psy3822          11 KETVTEILRLGVKQLEVY--RHPKILSVLHPI-------EECP----------------DALAFATEPVYASLASILAFQ   65 (138)
Q Consensus        11 ~e~~~e~lrrEi~~L~rL--rHPnIL~l~e~~-------ee~~----------------~~L~fVtE~V~~sL~~~L~~~   65 (138)
                      .....+.+++|+..+..|  +||||++++..+       ....                +.+|+||||+.++|.+++...
T Consensus       102 ~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~  181 (371)
T 3q60_A          102 SRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTL  181 (371)
T ss_dssp             HHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEEETTSCSSSBCSCC---CCEEEEEEEECCCSEEHHHHHHHH
T ss_pred             cccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehheecCCCCCeeeccCCcccceeeeEEEEecCCCCCHHHHHHHh
Confidence            345667889996655555  599988866333       2111                349999999999999999864


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCccHHHHHHHH-HHHHHHHHhhhcCCC----CcccCccee
Q psy3822          66 ESPAPNHSTNPVTGGSGSSPPPANQSASRPTHAREYHFLDIEIKYGV-AQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~E~eik~gl-~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                      ....                             ......+..++..+ .||++|| +|||+..    .+.|++|.+
T Consensus       182 ~~~~-----------------------------~~~~~~~~~vk~~i~~qi~~aL-~~LH~~~ivHrDikp~NIll  227 (371)
T 3q60_A          182 DFVY-----------------------------VFRGDEGILALHILTAQLIRLA-ANLQSKGLVHGHFTPDNLFI  227 (371)
T ss_dssp             HHSC-----------------------------CCCHHHHHHHHHHHHHHHHHHH-HHHHHTTEEETTCSGGGEEE
T ss_pred             cccc-----------------------------chhhhhhhhhHHHHHHHHHHHH-HHHHHCCCccCcCCHHHEEE
Confidence            3210                             00123344555555 9999999 9999754    455888875

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.00  E-value=4.1e-10  Score=88.13  Aligned_cols=84  Identities=13%  Similarity=0.061  Sum_probs=67.1

Q ss_pred             HHHHHHHHHhhhC----CCCCeeEEeceeeecCCeEEEEecc-c-cccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          16 EILRLGVKQLEVY----RHPKILSVLHPIEECPDALAFATEP-V-YASLASILAFQESPAPNHSTNPVTGGSGSSPPPAN   89 (138)
Q Consensus        16 e~lrrEi~~L~rL----rHPnIL~l~e~~ee~~~~L~fVtE~-V-~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (138)
                      ..+.+|+..|.+|    +||||+++++.+++ .+..++|||+ + .++|.+++....                       
T Consensus        79 ~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~-~~~~~~v~e~~~~~~~L~~~l~~~~-----------------------  134 (312)
T 2iwi_A           79 VTCPLEVALLWKVGAGGGHPGVIRLLDWFET-QEGFMLVLERPLPAQDLFDYITEKG-----------------------  134 (312)
T ss_dssp             CCCCHHHHHHHHHHSSCCCSSBCCEEEEC------CEEEEECCSSEEEHHHHHHHHC-----------------------
T ss_pred             HHHHHHHHHHHhhcccCCCCCeeeEEEEEec-CCeEEEEEEecCCCCCHHHHHHhcC-----------------------
Confidence            4567899999999    99999999997764 6789999999 5 479999998542                       


Q ss_pred             CCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          90 QSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        90 ~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                  .+++.++..++.||++|| +|||+..    .+.|++|.+
T Consensus       135 ------------~~~~~~~~~~~~qi~~~l-~~lH~~~i~H~dlkp~Nil~  172 (312)
T 2iwi_A          135 ------------PLGEGPSRCFFGQVVAAI-QHCHSRGVVHRDIKDENILI  172 (312)
T ss_dssp             ------------SCCHHHHHHHHHHHHHHH-HHHHHHTEECCCCSGGGEEE
T ss_pred             ------------CCCHHHHHHHHHHHHHHH-HHHHHCCeeecCCChhhEEE
Confidence                        588999999999999999 9999753    455888765

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=98.99  E-value=1.7e-09  Score=86.79  Aligned_cols=81  Identities=15%  Similarity=0.177  Sum_probs=64.4

Q ss_pred             HHHhhhCCCCCeeEEeceeeec---CCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcc
Q psy3822          22 VKQLEVYRHPKILSVLHPIEEC---PDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASRPTH   97 (138)
Q Consensus        22 i~~L~rLrHPnIL~l~e~~ee~---~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   97 (138)
                      ...++.++||||+++++.++..   ++.+++||||+. ++|.+++.....                              
T Consensus        73 ~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~------------------------------  122 (336)
T 3fhr_A           73 DHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGD------------------------------  122 (336)
T ss_dssp             HHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCTTEEHHHHHHTC-C------------------------------
T ss_pred             HHHHHhcCCCChHHHHHHHhhccCCCceEEEEEeccCCCCHHHHHHhcCC------------------------------
Confidence            3345678999999999977642   346999999996 599999985431                              


Q ss_pred             cccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          98 AREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        98 ~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                         ..+++.+++.++.||+.|| .|||+..    .+.|++|.+
T Consensus       123 ---~~l~~~~~~~i~~ql~~~l-~~LH~~~ivH~dlkp~NIll  161 (336)
T 3fhr_A          123 ---QAFTEREAAEIMRDIGTAI-QFLHSHNIAHRDVKPENLLY  161 (336)
T ss_dssp             ---CCCBHHHHHHHHHHHHHHH-HHHHHTTEECSCCSGGGEEE
T ss_pred             ---CCCCHHHHHHHHHHHHHHH-HHHHhCCeecCCCCHHHEEE
Confidence               2589999999999999999 9999864    445888775

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=98.98  E-value=1e-09  Score=86.48  Aligned_cols=81  Identities=14%  Similarity=0.039  Sum_probs=63.0

Q ss_pred             HHHHHHhhhCCCCCeeEEeceeee----cCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          19 RLGVKQLEVYRHPKILSVLHPIEE----CPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSAS   93 (138)
Q Consensus        19 rrEi~~L~rLrHPnIL~l~e~~ee----~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (138)
                      .+|+..+..++||||+++++....    +...+++||||+. ++|.+++...                            
T Consensus        55 e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~----------------------------  106 (336)
T 3g2f_A           55 EKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLH----------------------------  106 (336)
T ss_dssp             HHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEEECCCTTCBHHHHHHHC----------------------------
T ss_pred             HHHHHHHHhccCcchhhheecccccccCCCceEEEEEecCCCCcHHHHHhhc----------------------------
Confidence            456666777999999999864332    2347899999994 6999999743                            


Q ss_pred             CCcccccCCccHHHHHHHHHHHHHHHHhhhcCC---------C----CcccCccee
Q psy3822          94 RPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVP---------S----TYLPSSVAF  136 (138)
Q Consensus        94 ~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~---------a----~~~~~~~~~  136 (138)
                              .+++.++..++.||++|| +|||+.         .    .+.|++|.+
T Consensus       107 --------~~~~~~~~~i~~qi~~~L-~~LH~~~~~~~~~~~~ivH~Dikp~Nill  153 (336)
T 3g2f_A          107 --------TSDWVSSCRLAHSVTRGL-AYLHTELPRGDHYKPAISHRDLNSRNVLV  153 (336)
T ss_dssp             --------CBCHHHHHHHHHHHHHHH-HHHHCCBCCGGGCBCCEECSSCSGGGEEE
T ss_pred             --------ccchhHHHHHHHHHHHHH-HHHHhhhccccccccceeecccccceEEE
Confidence                    357788999999999999 999987         2    334888765

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=98.95  E-value=1.9e-09  Score=85.50  Aligned_cols=84  Identities=12%  Similarity=0.033  Sum_probs=70.6

Q ss_pred             HHHHHHHHHhhhCC--CCCeeEEeceeeecCCeEEEEecccc--ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          16 EILRLGVKQLEVYR--HPKILSVLHPIEECPDALAFATEPVY--ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        16 e~lrrEi~~L~rLr--HPnIL~l~e~~ee~~~~L~fVtE~V~--~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      +.+.+|+.+|++|+  ||||+++++.++ ..+.+++|||++.  ++|.+++....                         
T Consensus        91 ~~~~~E~~~l~~l~~~~~~i~~~~~~~~-~~~~~~lv~e~~~~~~~L~~~l~~~~-------------------------  144 (320)
T 3a99_A           91 TRVPMEVVLLKKVSSGFSGVIRLLDWFE-RPDSFVLILERPEPVQDLFDFITERG-------------------------  144 (320)
T ss_dssp             CEEEHHHHHHHHHCSSSCSBCCEEEEEE-CSSEEEEEEECCSSEEEHHHHHHHHC-------------------------
T ss_pred             hHHHHHHHHHHhhccCCCCceEEEEEEe-cCCcEEEEEEcCCCCccHHHHHhccC-------------------------
Confidence            45678999999997  599999999776 4679999999995  79999998542                         


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                .+++.+++.++.||++|| +|||+..    .+.|++|.+
T Consensus       145 ----------~l~~~~~~~i~~qi~~~L-~~LH~~~ivH~Dlkp~NIll  182 (320)
T 3a99_A          145 ----------ALQEELARSFFWQVLEAV-RHCHNCGVLHRDIKDENILI  182 (320)
T ss_dssp             ----------SCCHHHHHHHHHHHHHHH-HHHHHTTEECCCCSGGGEEE
T ss_pred             ----------CCCHHHHHHHHHHHHHHH-HHHHHCCcEeCCCCHHHEEE
Confidence                      588899999999999999 9999754    445888765

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=98.89  E-value=4.7e-09  Score=90.05  Aligned_cols=85  Identities=11%  Similarity=0.020  Sum_probs=70.1

Q ss_pred             HHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q psy3822          17 ILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASRPT   96 (138)
Q Consensus        17 ~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   96 (138)
                      .+.+|+.+|++|+|++++..+..+....+..++||||+.++|.+++....                              
T Consensus        48 ~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~g~sL~~ll~~~~------------------------------   97 (483)
T 3sv0_A           48 QLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCS------------------------------   97 (483)
T ss_dssp             CHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECCCCBHHHHHHHTT------------------------------
T ss_pred             HHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECCCCCHHHHHHhhc------------------------------
Confidence            46899999999998666655555666678999999999889999998543                              


Q ss_pred             ccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          97 HAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        97 ~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                          ..|++.++..++.||+.|| +|||+..    .+.|++|.+
T Consensus        98 ----~~l~~~~~~~i~~qi~~aL-~yLH~~gIvHrDIKP~NILl  136 (483)
T 3sv0_A           98 ----RKLSLKTVLMLADQMINRV-EFVHSKSFLHRDIKPDNFLM  136 (483)
T ss_dssp             ----TCCCHHHHHHHHHHHHHHH-HHHHHTTEECCCCCGGGEEE
T ss_pred             ----CCCCHHHHHHHHHHHHHHH-HHHHHCCEeecccCcceEEE
Confidence                1589999999999999999 9999864    456888876

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=98.88  E-value=5.7e-09  Score=84.84  Aligned_cols=90  Identities=14%  Similarity=0.120  Sum_probs=72.9

Q ss_pred             hHHHHHHHHHHHHhhhCC-CCC-----eeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYR-HPK-----ILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSP   85 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLr-HPn-----IL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~   85 (138)
                      ....+.+++|+.+|+.|+ |||     |+++++.+.. .+.+++||||+.++|.+++.....                  
T Consensus        91 ~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~-~~~~~lv~e~~~~~L~~~l~~~~~------------------  151 (382)
T 2vx3_A           91 KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMF-RNHLCLVFEMLSYNLYDLLRNTNF------------------  151 (382)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEE-TTEEEEEEECCCCBHHHHHHHTTT------------------
T ss_pred             HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeecc-CCceEEEEecCCCCHHHHHhhcCc------------------
Confidence            345677899999999986 554     9999997764 679999999999999999985431                  


Q ss_pred             CCCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCC-C-----CcccCccee
Q psy3822          86 PPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVP-S-----TYLPSSVAF  136 (138)
Q Consensus        86 ~~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~-a-----~~~~~~~~~  136 (138)
                                     ..+++.+++.++.||+.|| .|||.+ .     .+.|++|.+
T Consensus       152 ---------------~~~~~~~~~~i~~qi~~al-~~lH~~~~~ivHrDlkp~NIll  192 (382)
T 2vx3_A          152 ---------------RGVSLNLTRKFAQQMCTAL-LFLATPELSIIHCDLKPENILL  192 (382)
T ss_dssp             ---------------SCCCHHHHHHHHHHHHHHH-HHHTSTTTCEECCCCSGGGEEE
T ss_pred             ---------------CCCCHHHHHHHHHHHHHHH-HHhccCCCCEEcCCCCcccEEE
Confidence                           1488899999999999999 999963 3     334888776

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=98.76  E-value=3.7e-09  Score=91.74  Aligned_cols=75  Identities=8%  Similarity=-0.066  Sum_probs=61.3

Q ss_pred             HHHHHHHHHHhhhCCCCCee--EEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVYRHPKIL--SVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        15 ~e~lrrEi~~L~rLrHPnIL--~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      .+.+++|+.+|++|+||||+  .+++.   +.+..|+||||+. ++|.+++..                           
T Consensus       383 ~~~~~~E~~il~~l~h~nIv~~~~~~~---~~~~~~lVmE~~~ggsL~~~l~~---------------------------  432 (540)
T 3en9_A          383 KSRTAREARYLALVKDFGIPAPYIFDV---DLDNKRIMMSYINGKLAKDVIED---------------------------  432 (540)
T ss_dssp             HHHHHHHHHHHHHGGGGTCCCCCEEEE---ETTTTEEEEECCCSEEHHHHSTT---------------------------
T ss_pred             HHHHHHHHHHHHhcCCCCcCceEEEEE---eCCccEEEEECCCCCCHHHHHHH---------------------------
Confidence            56689999999999999999  66663   3456799999996 799998862                           


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                      +..++.||++|| +|||+..    .+.|++|.+
T Consensus       433 ----------------~~~i~~qi~~aL-~~LH~~gIiHrDiKp~NILl  464 (540)
T 3en9_A          433 ----------------NLDIAYKIGEIV-GKLHKNDVIHNDLTTSNFIF  464 (540)
T ss_dssp             ----------------CTHHHHHHHHHH-HHHHHTTEECTTCCTTSEEE
T ss_pred             ----------------HHHHHHHHHHHH-HHHHHCcCccCCCCHHHEEE
Confidence                            346899999999 9999754    556888875

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=98.26  E-value=4.6e-07  Score=70.63  Aligned_cols=82  Identities=13%  Similarity=0.112  Sum_probs=57.4

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccccc------cHHHHHhhcCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYA------SLASILAFQESPAPNHSTNPVTGGSGSSPP   86 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~~------sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~   86 (138)
                      .....+++|+..|.+|+||+| .+..++..  +..++||||+.+      +|.++..                       
T Consensus       112 ~~~~~~~~E~~~l~~l~~~~i-~~p~~~~~--~~~~lVmE~~g~~g~~~~~L~~~~~-----------------------  165 (258)
T 1zth_A          112 KVFIWTEKEFRNLERAKEAGV-SVPQPYTY--MKNVLLMEFIGEDELPAPTLVELGR-----------------------  165 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTC-CCCCEEEE--ETTEEEEECCEETTEECCBHHHHGG-----------------------
T ss_pred             HHHHHHHHHHHHHHHHHhCCC-CCCeEEEc--CCCEEEEEecCCCCCccccHHHHhh-----------------------
Confidence            334578999999999999875 23333332  357899999952      6665543                       


Q ss_pred             CCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhc-C----CCCcccCccee
Q psy3822          87 PANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLY-V----PSTYLPSSVAF  136 (138)
Q Consensus        87 ~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH-~----~a~~~~~~~~~  136 (138)
                                     .+++.++...+.||++|| .||| +    +..+.|++|.+
T Consensus       166 ---------------~~~~~~~~~i~~qi~~~l-~~lH~~~givHrDlkp~NILl  204 (258)
T 1zth_A          166 ---------------ELKELDVEGIFNDVVENV-KRLYQEAELVHADLSEYNIMY  204 (258)
T ss_dssp             ---------------GGGGSCHHHHHHHHHHHH-HHHHHTSCEECSSCSTTSEEE
T ss_pred             ---------------ccChHHHHHHHHHHHHHH-HHHHHHCCEEeCCCCHHHEEE
Confidence                           123456788999999999 9999 5    23445888764

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=97.96  E-value=3.9e-06  Score=66.63  Aligned_cols=75  Identities=12%  Similarity=0.015  Sum_probs=55.2

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ..+.+.+|+.+|++|+|   +++.+++..  +.+|+||||+. ++|.+ +..                            
T Consensus       147 ~~~~~~~E~~~l~~l~~---~~v~~~~~~--~~~~lvmE~~~g~~L~~-l~~----------------------------  192 (282)
T 1zar_A          147 AIRSARNEFRALQKLQG---LAVPKVYAW--EGNAVLMELIDAKELYR-VRV----------------------------  192 (282)
T ss_dssp             HHHHHHHHHHHHHHTTT---SSSCCEEEE--ETTEEEEECCCCEEGGG-CCC----------------------------
T ss_pred             HHHHHHHHHHHHHhccC---CCcCeEEec--cceEEEEEecCCCcHHH-cch----------------------------
Confidence            45678999999999995   555554543  45799999996 58876 320                            


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                   .+++.++.||++|| .|||+..    .+.|++|.+
T Consensus       193 -------------~~~~~i~~qi~~~l-~~lH~~giiHrDlkp~NILl  226 (282)
T 1zar_A          193 -------------ENPDEVLDMILEEV-AKFYHRGIVHGDLSQYNVLV  226 (282)
T ss_dssp             -------------SCHHHHHHHHHHHH-HHHHHTTEECSCCSTTSEEE
T ss_pred             -------------hhHHHHHHHHHHHH-HHHHHCCCEeCCCCHHHEEE
Confidence                         12446899999999 9999754    455888764

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=97.84  E-value=2.5e-05  Score=64.51  Aligned_cols=95  Identities=11%  Similarity=-0.035  Sum_probs=63.0

Q ss_pred             HHHHHHHHHHHhhhCCC-CCeeE---------------------Eeceeeec----CCeEEEEeccccccHHHHHhhcCC
Q psy3822          14 VTEILRLGVKQLEVYRH-PKILS---------------------VLHPIEEC----PDALAFATEPVYASLASILAFQES   67 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrH-PnIL~---------------------l~e~~ee~----~~~L~fVtE~V~~sL~~~L~~~~~   67 (138)
                      ..+.+++|+..+..|+| +|+..                     +++.....    ...++++|+...++|.+++.....
T Consensus       121 ~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ll~~l~~  200 (413)
T 3dzo_A          121 AIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLS  200 (413)
T ss_dssp             CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEECCC---------------CCSEEEEEECCSEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcccCCCCccccccCCCccccccceEEEeehhcCCHHHHHHHhhc
Confidence            35789999999999988 32211                     11111110    124788888888999999964321


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcceee
Q psy3822          68 PAPNHSTNPVTGGSGSSPPPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAFC  137 (138)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~~  137 (138)
                      ..                            .....+++..+..++.||++|| +|||+..    .+.|++|.+.
T Consensus       201 ~~----------------------------~~~~~l~~~~~~~i~~qi~~aL-~~LH~~~iiHrDiKp~NILl~  245 (413)
T 3dzo_A          201 HS----------------------------STHKSLVHHARLQLTLQVIRLL-ASLHHYGLVHTYLRPVDIVLD  245 (413)
T ss_dssp             HT----------------------------TTSHHHHHHHHHHHHHHHHHHH-HHHHHTTEECSCCCGGGEEEC
T ss_pred             cc----------------------------ccCCCCCHHHHHHHHHHHHHHH-HHHHhCCcccCCcccceEEEe
Confidence            00                            0012588888889999999999 9999754    5568888753

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=95.76  E-value=0.0027  Score=54.07  Aligned_cols=73  Identities=10%  Similarity=-0.023  Sum_probs=48.6

Q ss_pred             HHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccccc-cHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcc
Q psy3822          19 RLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYA-SLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASRPTH   97 (138)
Q Consensus        19 rrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~~-sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   97 (138)
                      ++|...|.+|.+++ +.+.+|+...+  -++|||||.| +|..+.                                   
T Consensus       161 ~kE~~nL~rL~~~g-v~vp~p~~~~~--~~LVME~i~G~~L~~l~-----------------------------------  202 (397)
T 4gyi_A          161 IKEFAFMKALYEEG-FPVPEPIAQSR--HTIVMSLVDALPMRQVS-----------------------------------  202 (397)
T ss_dssp             HHHHHHHHHHHHTT-CSCCCEEEEET--TEEEEECCSCEEGGGCC-----------------------------------
T ss_pred             HHHHHHHHHHHhcC-CCCCeeeeccC--ceEEEEecCCccHhhhc-----------------------------------
Confidence            67899999996655 45566665433  3799999964 543211                                   


Q ss_pred             cccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          98 AREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        98 ~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                            +..+.+..+.||+.+| .|||+..    .+-|.+|..
T Consensus       203 ------~~~~~~~l~~qll~~l-~~lH~~gIVHrDLKp~NILl  238 (397)
T 4gyi_A          203 ------SVPDPASLYADLIALI-LRLAKHGLIHGDFNEFNILI  238 (397)
T ss_dssp             ------CCSCHHHHHHHHHHHH-HHHHHTTEECSCCSTTSEEE
T ss_pred             ------ccHHHHHHHHHHHHHH-HHHHHCCCcCCCCCHHHEEE
Confidence                  1124566789999999 9999743    334777653

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=95.51  E-value=0.022  Score=42.94  Aligned_cols=45  Identities=7%  Similarity=-0.152  Sum_probs=34.6

Q ss_pred             HHHHHHHHHhhhCC-CCCeeEEeceeeecCCeEEEEeccccc-cHHHH
Q psy3822          16 EILRLGVKQLEVYR-HPKILSVLHPIEECPDALAFATEPVYA-SLASI   61 (138)
Q Consensus        16 e~lrrEi~~L~rLr-HPnIL~l~e~~ee~~~~L~fVtE~V~~-sL~~~   61 (138)
                      ..+++|+..|+.|+ |+.+-+++.... +.+..|+|||+|.| +|.+.
T Consensus        54 ~~~~~E~~~l~~l~~~~~vP~v~~~~~-~~~~~~lv~e~i~G~~l~~~  100 (263)
T 3tm0_A           54 YDVEREKDMMLWLEGKLPVPKVLHFER-HDGWSNLLMSEADGVLCSEE  100 (263)
T ss_dssp             TCHHHHHHHHHHHTTTSCCCCEEEEEE-ETTEEEEEEECCSSEEHHHH
T ss_pred             HHHHHHHHHHHHHhcCCCCCeEEEEEe-cCCceEEEEEecCCeehhhc
Confidence            35899999999985 666777777544 46789999999975 77655

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=91.97  E-value=0.11  Score=41.28  Aligned_cols=73  Identities=8%  Similarity=-0.025  Sum_probs=49.6

Q ss_pred             HHHHHHHHHhhhCC--CCCeeEEeceeeecC--CeEEEEeccccc-cHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          16 EILRLGVKQLEVYR--HPKILSVLHPIEECP--DALAFATEPVYA-SLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        16 e~lrrEi~~L~rLr--HPnIL~l~e~~ee~~--~~L~fVtE~V~~-sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      +.+.+|+.+|+.|+  +..+.+++...++..  +..++|||+|.| .+.+     ..                       
T Consensus        81 ~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme~v~G~~l~~-----~~-----------------------  132 (359)
T 3dxp_A           81 HAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIMEFVSGRVLWD-----QS-----------------------  132 (359)
T ss_dssp             -CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEECCCCBCCCC-----TT-----------------------
T ss_pred             HHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEEecCCeecCC-----Cc-----------------------
Confidence            56789999999987  344556665333221  358999999976 2211     00                       


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCC
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVP  126 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~  126 (138)
                               -..+++.+....+.|+.+.| ..||..
T Consensus       133 ---------~~~l~~~~~~~~~~~l~~~L-a~LH~~  158 (359)
T 3dxp_A          133 ---------LPGMSPAERTAIYDEMNRVI-AAMHTV  158 (359)
T ss_dssp             ---------CTTCCHHHHHHHHHHHHHHH-HHHHHS
T ss_pred             ---------cccCCHHHHHHHHHHHHHHH-HHHhCC
Confidence                     01467778888999999999 999973

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=91.19  E-value=0.76  Score=36.04  Aligned_cols=73  Identities=11%  Similarity=-0.070  Sum_probs=51.0

Q ss_pred             HHHHHHHHHHHHhhhCCC------CCeeEEeceeeecCCeEEEEeccccc-cHHHHHhhcCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRH------PKILSVLHPIEECPDALAFATEPVYA-SLASILAFQESPAPNHSTNPVTGGSGSSP   85 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrH------PnIL~l~e~~ee~~~~L~fVtE~V~~-sL~~~L~~~~~~~~~~~~~~~~~~~~~~~   85 (138)
                      .....+++|+..|+.|++      |.++.+-.   ...+.-++|||++.| .|.+..-.                     
T Consensus        51 ~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~---~~~g~~~~v~e~i~G~~l~~~~~~---------------------  106 (306)
T 3tdw_A           51 QGADELNKEIQLLPLLVGCVKVNIPQYVYIGK---RSDGNPFVGYRKVQGQILGEDGMA---------------------  106 (306)
T ss_dssp             HHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEE---CTTSCEEEEEECCCSEECHHHHHT---------------------
T ss_pred             hHHHHHHHHHHHHHHHHhcCCCCCCCeEeecc---cCCCceEEEEeccCCeECchhhhh---------------------
Confidence            456789999999999975      33333322   233457899999976 66553220                     


Q ss_pred             CCCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCC
Q psy3822          86 PPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVP  126 (138)
Q Consensus        86 ~~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~  126 (138)
                                      .+++.+......|+.+.| .-||+-
T Consensus       107 ----------------~l~~~~~~~~~~~lg~~L-a~LH~~  130 (306)
T 3tdw_A          107 ----------------VLPDDAKDRLALQLAEFM-NELSAF  130 (306)
T ss_dssp             ----------------TSCHHHHHHHHHHHHHHH-HHHHHS
T ss_pred             ----------------hCCHHHHHHHHHHHHHHH-HHHhcC
Confidence                            356667778889999999 999974

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=88.53  E-value=0.56  Score=34.37  Aligned_cols=42  Identities=14%  Similarity=0.038  Sum_probs=30.2

Q ss_pred             HHHHHHHHHhhhCCCCCe--eEEeceeeecCCeEEEEeccccc-cH
Q psy3822          16 EILRLGVKQLEVYRHPKI--LSVLHPIEECPDALAFATEPVYA-SL   58 (138)
Q Consensus        16 e~lrrEi~~L~rLrHPnI--L~l~e~~ee~~~~L~fVtE~V~~-sL   58 (138)
                      +.+++|+..|+.|++.+|  -+++.... +.+..++|||++.| +|
T Consensus        58 ~~~~~E~~~l~~l~~~~~~vP~~~~~~~-~~~~~~~v~e~i~G~~l  102 (264)
T 1nd4_A           58 NELQDEAARLSWLATTGVPCAAVLDVVT-EAGRDWLLLGEVPGQDL  102 (264)
T ss_dssp             SCHHHHHHHHHHHHTTTCCBCCEEEEEE-CSSCEEEEEECCSSEET
T ss_pred             hhhhHHHHHHHHHHhCCCCCCeEEEecc-CCCCCEEEEEecCCccc
Confidence            457899999999875443  44666333 45679999999975 55

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=83.84  E-value=1.5  Score=33.85  Aligned_cols=75  Identities=9%  Similarity=-0.045  Sum_probs=47.6

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeee--cCC---eEEEEeccccc-cHHHHHhhcCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEE--CPD---ALAFATEPVYA-SLASILAFQESPAPNHSTNPVTGGSGSSPP   86 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee--~~~---~L~fVtE~V~~-sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~   86 (138)
                      .....+++|+..|+.|.+..-+.+-.++..  +.+   .-|+|||++.| +|.+....                      
T Consensus        52 ~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~G~~l~~~~~~----------------------  109 (304)
T 3sg8_A           52 RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIKGVPLTPLLLN----------------------  109 (304)
T ss_dssp             HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCCCEECCHHHHH----------------------
T ss_pred             chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccCCeECCccccc----------------------
Confidence            345788999999998843211212222211  122   34889999975 55432220                      


Q ss_pred             CCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcC
Q psy3822          87 PANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYV  125 (138)
Q Consensus        87 ~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~  125 (138)
                                     .+++.+......|+.+.| .-||+
T Consensus       110 ---------------~l~~~~~~~~~~~l~~~l-a~LH~  132 (304)
T 3sg8_A          110 ---------------NLPKQSQNQAAKDLARFL-SELHS  132 (304)
T ss_dssp             ---------------TSCHHHHHHHHHHHHHHH-HHHHH
T ss_pred             ---------------cCCHHHHHHHHHHHHHHH-HHHHc
Confidence                           366677788899999999 99996

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=83.82  E-value=4.2  Score=30.23  Aligned_cols=47  Identities=17%  Similarity=0.212  Sum_probs=33.0

Q ss_pred             HHHHHHHHHHHHhhhCC----CCCeeEEeceeeecCCeEEEEeccccc-cHHHHHh
Q psy3822          13 TVTEILRLGVKQLEVYR----HPKILSVLHPIEECPDALAFATEPVYA-SLASILA   63 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLr----HPnIL~l~e~~ee~~~~L~fVtE~V~~-sL~~~L~   63 (138)
                      .....+.+|+..|+.|.    =|.|+.+.    ++.+.-++|||+|.| ++.+...
T Consensus        61 ~~~~~~~~E~~~l~~l~~~vPVP~v~~~~----~~~~~~~lvme~l~G~~~~~~~~  112 (272)
T 4gkh_A           61 SVANDVTDEMVRLNWLTAFMPLPTIKHFI----RTPDDAWLLTTAIPGKTAFQVLE  112 (272)
T ss_dssp             HHHHHHHHHHHHHHHHTTTSCCCCEEEEE----EETTEEEEEEECCCSEEHHHHHH
T ss_pred             CCHhHHHHHHHHHHHhccCCCcCeEEEEE----EECCeEEEEEEeeCCcccccccc
Confidence            34567899999998874    35554432    245688999999975 7776654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	138
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.65
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.63
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.63
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.63
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.62
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.62
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.62
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.62
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.61
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.6
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.6
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.6
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.59
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.59
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.59
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.58
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.58
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.58
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.57
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.57
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.56
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.53
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.53
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.53
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.52
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.51
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.51
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.5
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.49
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.49
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.47
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.46
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.45
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.45
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.45
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.44
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.44
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.44
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.43
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.42
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.42
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.42
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.41
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.41
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.4
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.38
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.38
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.37
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.36
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.36
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.35
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.34
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.34
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.33
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.27
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.26
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.25
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.23
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.2
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.15
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.01
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	98.25
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	97.57

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=2.5e-16  Score=124.00  Aligned_cols=90  Identities=12%  Similarity=0.132  Sum_probs=75.3

Q ss_pred             chHHHHHHHHHHHHhhhCCCCCeeEEeceeeec---CCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCC
Q psy3822          11 KETVTEILRLGVKQLEVYRHPKILSVLHPIEEC---PDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPP   86 (138)
Q Consensus        11 ~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~---~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~   86 (138)
                      .+...+.+++|+++|++|+|||||++++.+++.   .+.+|+||||+. ++|.+++.+..                    
T Consensus        48 ~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~ivmE~~~~g~L~~~l~~~~--------------------  107 (270)
T d1t4ha_          48 TKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFK--------------------  107 (270)
T ss_dssp             CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEECCCSCBHHHHHHHHS--------------------
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEEEeCCCCCcHHHHHhccc--------------------
Confidence            345567899999999999999999999987753   357999999995 69999998543                    


Q ss_pred             CCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC------CcccCccee
Q psy3822          87 PANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS------TYLPSSVAF  136 (138)
Q Consensus        87 ~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a------~~~~~~~~~  136 (138)
                                     .+++.+++.++.||++|| +|||+..      .+.|++|.+
T Consensus       108 ---------------~~~~~~~~~~~~qi~~gl-~yLH~~~~~IiHrDiKp~NILl  147 (270)
T d1t4ha_         108 ---------------VMKIKVLRSWCRQILKGL-QFLHTRTPPIIHRDLKCDNIFI  147 (270)
T ss_dssp             ---------------SCCHHHHHHHHHHHHHHH-HHHHTSSSCCCCSCCCGGGEEE
T ss_pred             ---------------cccHHHHHHHHHHHHHHH-HHHHHCCCCEEeCCcChhhcee
Confidence                           588999999999999999 9999865      234888765

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=7.8e-17  Score=127.15  Aligned_cols=88  Identities=10%  Similarity=0.038  Sum_probs=72.9

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      ...+.+++|+.+|++|+|||||++++.+++ .+.+|+|||||. ++|.++|...                          
T Consensus        45 ~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~-~~~~~ivmEy~~gg~L~~~l~~~--------------------------   97 (271)
T d1nvra_          45 DCPENIKKEICINKMLNHENVVKFYGHRRE-GNIQYLFLEYCSGGELFDRIEPD--------------------------   97 (271)
T ss_dssp             ----CHHHHHHHHHTCCCTTBCCEEEEEEE-TTEEEEEEECCTTEEGGGGSBTT--------------------------
T ss_pred             hHHHHHHHHHHHHHhCCCCCEeeEeeeecc-CceeEEEEeccCCCcHHHHHhcC--------------------------
Confidence            345678999999999999999999998875 779999999996 6999988632                          


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcceee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAFC  137 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~~  137 (138)
                               ..++|.+++.++.||++|| +|||+..    .+.|++|.+.
T Consensus        98 ---------~~l~e~~~~~i~~qi~~al-~ylH~~~IiHrDiKp~NILl~  137 (271)
T d1nvra_          98 ---------IGMPEPDAQRFFHQLMAGV-VYLHGIGITHRDIKPENLLLD  137 (271)
T ss_dssp             ---------TBCCHHHHHHHHHHHHHHH-HHHHHTTEECSCCCGGGEEEC
T ss_pred             ---------CCCCHHHHHHHHHHHHHHH-HHHHHcCCccCcccHHHEEEC
Confidence                     1689999999999999999 9999864    4568888763

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=3.3e-16  Score=123.33  Aligned_cols=88  Identities=19%  Similarity=0.199  Sum_probs=76.2

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      ...+.+++|+.+|++|+|||||++++.++ +.+.+|+|||||. ++|.++|....                         
T Consensus        55 ~~~~~~~~E~~il~~l~HpnIv~~~~~~~-~~~~~~iv~E~~~gg~L~~~i~~~~-------------------------  108 (293)
T d1jksa_          55 VSREDIEREVSILKEIQHPNVITLHEVYE-NKTDVILILELVAGGELFDFLAEKE-------------------------  108 (293)
T ss_dssp             BCHHHHHHHHHHHHHCCCTTBCCEEEEEE-CSSEEEEEEECCCSCBHHHHHHHHS-------------------------
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCcEEEEEE-ECCEEEEEEEcCCCccccchhcccc-------------------------
Confidence            34678899999999999999999999776 5789999999996 69999998543                         


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcceee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAFC  137 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~~  137 (138)
                                .++|.+++.++.||++|| +|||+..    .+.|++|.++
T Consensus       109 ----------~l~~~~~~~~~~qi~~al-~yLH~~~ivHrDiKp~Nill~  147 (293)
T d1jksa_         109 ----------SLTEEEATEFLKQILNGV-YYLHSLQIAHFDLKPENIMLL  147 (293)
T ss_dssp             ----------SCCHHHHHHHHHHHHHHH-HHHHHTTEECCCCSGGGEEES
T ss_pred             ----------ccchhHHHHHHHHHHHHH-HhhhhcceeecccccceEEEe
Confidence                      589999999999999999 9999865    4568888663

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=1.4e-16  Score=127.43  Aligned_cols=90  Identities=16%  Similarity=0.135  Sum_probs=76.6

Q ss_pred             cchHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          10 RKETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPA   88 (138)
Q Consensus        10 ~~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (138)
                      ..+...+.+++|+.+|++|+|||||++++.++ +.+.+|+||||+. ++|.+++.+..                      
T Consensus        43 ~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~-~~~~~~iVmEy~~gg~L~~~l~~~~----------------------   99 (322)
T d1s9ja_          43 IKPAIRNQIIRELQVLHECNSPYIVGFYGAFY-SDGEISICMEHMDGGSLDQVLKKAG----------------------   99 (322)
T ss_dssp             CCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEE-CSSEEEEEEECCTTEEHHHHHHHHS----------------------
T ss_pred             hCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEE-ECCEEEEEEEcCCCCcHHHHHhhcC----------------------
Confidence            34556688899999999999999999999887 5779999999996 69999998543                      


Q ss_pred             CCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC-----CcccCccee
Q psy3822          89 NQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS-----TYLPSSVAF  136 (138)
Q Consensus        89 ~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a-----~~~~~~~~~  136 (138)
                                   .|+|.+++.++.||++|| +|||+..     .+.|++|.+
T Consensus       100 -------------~l~~~~~~~~~~qil~aL-~yLH~~~~IiHRDiKP~NILl  138 (322)
T d1s9ja_         100 -------------RIPEQILGKVSIAVIKGL-TYLREKHKIMHRDVKPSNILV  138 (322)
T ss_dssp             -------------SCCHHHHHHHHHHHHHHH-HHHHHHHCCCCSCCSGGGEEE
T ss_pred             -------------CCCHHHHHHHHHHHHHHH-HHHHHhCCEEccccCHHHeeE
Confidence                         589999999999999999 9999632     445888865

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=2.5e-16  Score=123.69  Aligned_cols=100  Identities=17%  Similarity=0.123  Sum_probs=77.0

Q ss_pred             cCCCCcchHHHHHHHHHHHHhhhCCCCCeeEEeceeee-cCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCC
Q psy3822           5 LHKPKRKETVTEILRLGVKQLEVYRHPKILSVLHPIEE-CPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSG   82 (138)
Q Consensus         5 ~~K~~~~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee-~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~   82 (138)
                      +.+....+...+.+.+|+++|++|+|||||++++.+.+ +.+.+|+|||||. ++|.+++.+....              
T Consensus        37 i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~ivmEy~~~g~L~~~i~~~~~~--------------  102 (269)
T d2java1          37 LDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKE--------------  102 (269)
T ss_dssp             ECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEEEECCTTEEHHHHHHHHHHH--------------
T ss_pred             EChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEEEEecCCCCcHHHHHHhcccc--------------
Confidence            34444455667889999999999999999999998754 3567999999995 7999999753211              


Q ss_pred             CCCCCCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCC---------CCcccCccee
Q psy3822          83 SSPPPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVP---------STYLPSSVAF  136 (138)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~---------a~~~~~~~~~  136 (138)
                                       ...|+|.+++.++.||++|| +|||+.         ..+.|++|.+
T Consensus       103 -----------------~~~l~e~~~~~i~~qi~~al-~ylH~~~~~~~~IiHrDiKp~NIll  147 (269)
T d2java1         103 -----------------RQYLDEEFVLRVMTQLTLAL-KECHRRSDGGHTVLHRDLKPANVFL  147 (269)
T ss_dssp             -----------------TCCCCHHHHHHHHHHHHHHH-HHHHHHCC---------CCGGGEEE
T ss_pred             -----------------CCCCCHHHHHHHHHHHHHHH-HHHHHhcCCCCCEEeCcCchhhcCc
Confidence                             12699999999999999999 999963         3445888865

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=2.5e-16  Score=125.04  Aligned_cols=88  Identities=16%  Similarity=0.156  Sum_probs=75.2

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ..+.+++|+++|++|+|||||++++.+++ .+.+|+||||+. ++|.+++.+..                          
T Consensus        52 ~~~~~~~E~~il~~l~HpnIv~l~~~~~~-~~~~~lvmEy~~~g~L~~~~~~~~--------------------------  104 (288)
T d2jfla1          52 ELEDYMVEIDILASCDHPNIVKLLDAFYY-ENNLWILIEFCAGGAVDAVMLELE--------------------------  104 (288)
T ss_dssp             GGGGTHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEEEEECCTTEEHHHHHHHHT--------------------------
T ss_pred             HHHHHHHHHHHHHhCCCCCCCeEEEEEee-CCeEEEEEecCCCCcHHHHHHhcC--------------------------
Confidence            35678999999999999999999997764 779999999995 79999987543                          


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcceee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAFC  137 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~~  137 (138)
                              ..|+|.+++.++.||++|| +|||+..    .+.|++|.+.
T Consensus       105 --------~~l~e~~~~~i~~qi~~gL-~ylH~~~ivHrDiKp~NIll~  144 (288)
T d2jfla1         105 --------RPLTESQIQVVCKQTLDAL-NYLHDNKIIHRDLKAGNILFT  144 (288)
T ss_dssp             --------SCCCHHHHHHHHHHHHHHH-HHHHHTTEECCCCSGGGEEEC
T ss_pred             --------CCCCHHHHHHHHHHHHHHH-HHHHHCCEEEeecChhheeEC
Confidence                    1589999999999999999 9999754    5569988764

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=4.8e-16  Score=121.92  Aligned_cols=88  Identities=16%  Similarity=0.142  Sum_probs=75.7

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      ...+.+++|+.+|++|+||||+++++.++ +.+.+|+|||||. ++|.++|.+..                         
T Consensus        48 ~~~~~~~~E~~il~~l~hpnIv~~~~~~~-~~~~~~ivmEy~~~g~L~~~l~~~~-------------------------  101 (263)
T d2j4za1          48 GVEHQLRREVEIQSHLRHPNILRLYGYFH-DATRVYLILEYAPLGTVYRELQKLS-------------------------  101 (263)
T ss_dssp             TCHHHHHHHHHHHHTCCCTTBCCEEEEEE-CSSEEEEEEECCTTCBHHHHHHHHS-------------------------
T ss_pred             HHHHHHHHHHHHHHhcCCCCCCeEEEEEE-ECCEEEEEEeecCCCcHHHHHhhcC-------------------------
Confidence            34577899999999999999999999776 5789999999996 79999998543                         


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcceee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAFC  137 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~~  137 (138)
                                .++|.+++.++.||++|| +|||+..    .+.|++|.+.
T Consensus       102 ----------~l~e~~~~~i~~qi~~al-~~lH~~~ivHrDiKp~Nill~  140 (263)
T d2j4za1         102 ----------KFDEQRTATYITELANAL-SYCHSKRVIHRDIKPENLLLG  140 (263)
T ss_dssp             ----------SCCHHHHHHHHHHHHHHH-HHHHHTTCCCCCCCGGGEEEC
T ss_pred             ----------CCCHHHHHHHHHHHHHHH-HHHHHCCeeeeeeccccceec
Confidence                      589999999999999999 9999754    4568888763

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=8.3e-16  Score=123.45  Aligned_cols=86  Identities=17%  Similarity=0.238  Sum_probs=73.8

Q ss_pred             HHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          16 EILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASR   94 (138)
Q Consensus        16 e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (138)
                      +.+++|+++|++|+|||||++++.+++ .+.+|+|||||. ++|.++|....                            
T Consensus        46 ~~~~~Ei~il~~l~HpnIv~~~~~~~~-~~~~~lvmE~~~gg~L~~~i~~~~----------------------------   96 (321)
T d1tkia_          46 VLVKKEISILNIARHRNILHLHESFES-MEELVMIFEFISGLDIFERINTSA----------------------------   96 (321)
T ss_dssp             HHHHHHHHHHHHSCCTTBCCEEEEEEE-TTEEEEEECCCCCCBHHHHHTSSS----------------------------
T ss_pred             HHHHHHHHHHHhCCCCCCCeEEEEEEE-CCEEEEEEecCCCCcHHHHHHhcC----------------------------
Confidence            567899999999999999999998874 779999999996 69999997432                            


Q ss_pred             CcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcceee
Q psy3822          95 PTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAFC  137 (138)
Q Consensus        95 ~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~~  137 (138)
                            ..|+|.+++.++.||++|| +|||+..    .+.|+++.+.
T Consensus        97 ------~~l~e~~~~~i~~qi~~al-~yLH~~~iiHrDlKp~NIll~  136 (321)
T d1tkia_          97 ------FELNEREIVSYVHQVCEAL-QFLHSHNIGHFDIRPENIIYQ  136 (321)
T ss_dssp             ------CCCCHHHHHHHHHHHHHHH-HHHHHTTEECCCCCGGGEEES
T ss_pred             ------CCCCHHHHHHHHHHHHHHH-HHHHHcCCCcccccccceeec
Confidence                  2689999999999999999 9999754    4458888763

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.61  E-value=1e-15  Score=124.71  Aligned_cols=90  Identities=18%  Similarity=0.231  Sum_probs=76.7

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      +...+.+++|+.+|++|+|||||++++.+++ .+.+|+|||||. ++|.++|....                        
T Consensus        64 ~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~-~~~~~ivmE~~~gg~L~~~l~~~~------------------------  118 (350)
T d1koaa2          64 ESDKETVRKEIQTMSVLRHPTLVNLHDAFED-DNEMVMIYEFMSGGELFEKVADEH------------------------  118 (350)
T ss_dssp             HHHHHHHHHHHHHHHHTCCTTBCCEEEEEEE-TTEEEEEECCCCSCBHHHHHTCTT------------------------
T ss_pred             hhhHHHHHHHHHHHHhCCCCCCCcEEEEEEE-CCEEEEEEEcCCCCCHHHHHHhhc------------------------
Confidence            3445789999999999999999999998775 779999999995 79999996322                        


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcceee
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAFC  137 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~~  137 (138)
                                ..|+|.+++.++.||++|| +|||+..    .+.|++|.++
T Consensus       119 ----------~~l~e~~~~~i~~qi~~aL-~ylH~~~iiHrDiKp~NIll~  158 (350)
T d1koaa2         119 ----------NKMSEDEAVEYMRQVCKGL-CHMHENNYVHLDLKPENIMFT  158 (350)
T ss_dssp             ----------SCBCHHHHHHHHHHHHHHH-HHHHHTTEECCCCCGGGEEES
T ss_pred             ----------CCCCHHHHHHHHHHHHHHH-HHHHhcCCeeeeechhHeeec
Confidence                      2699999999999999999 9999854    5569988763

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.60  E-value=7.5e-16  Score=123.20  Aligned_cols=86  Identities=15%  Similarity=0.163  Sum_probs=71.1

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ..+.+.+|+.+|++|+|||||++++.++ +.+.+|+|||||. ++|.++|....                          
T Consensus        50 ~~~~~~~Ei~il~~l~HpnIv~l~~~~~-~~~~~~lvmE~~~gg~L~~~l~~~~--------------------------  102 (307)
T d1a06a_          50 KEGSMENEIAVLHKIKHPNIVALDDIYE-SGGHLYLIMQLVSGGELFDRIVEKG--------------------------  102 (307)
T ss_dssp             -----CHHHHHHHTCCCTTBCCEEEEEE-CSSEEEEEECCCCSCBHHHHHHTCS--------------------------
T ss_pred             HHHHHHHHHHHHHhCCCCCCCcEEEEEE-ECCEEEEEEeccCCCcHHHhhhccc--------------------------
Confidence            3467889999999999999999999776 5789999999996 79999997432                          


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                               .|+|.+++.++.||++|| +|||+..    .+.|++|.+
T Consensus       103 ---------~l~e~~~~~~~~qi~~al-~ylH~~~iiHrDiKp~Nil~  140 (307)
T d1a06a_         103 ---------FYTERDASRLIFQVLDAV-KYLHDLGIVHRDLKPENLLY  140 (307)
T ss_dssp             ---------CCCHHHHHHHHHHHHHHH-HHHHHTTCCCSCCCGGGEEE
T ss_pred             ---------CCCHHHHHHHHHHHHHHH-HhhhhceeeeEEecccceee
Confidence                     589999999999999999 9999754    445888765

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=9.6e-16  Score=122.20  Aligned_cols=84  Identities=13%  Similarity=0.122  Sum_probs=72.9

Q ss_pred             HHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSAS   93 (138)
Q Consensus        15 ~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (138)
                      .+.+.+|+.+|++|+||||+++++.+++ .+.+|+|||||. ++|.+++.+.                            
T Consensus        61 ~~~~~~E~~il~~l~HpnIv~~~~~~~~-~~~~~ivmEy~~gg~L~~~~~~~----------------------------  111 (293)
T d1yhwa1          61 KELIINEILVMRENKNPNIVNYLDSYLV-GDELWVVMEYLAGGSLTDVVTET----------------------------  111 (293)
T ss_dssp             HHHHHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEEEEECCTTCBHHHHHHHS----------------------------
T ss_pred             HHHHHHHHHHHHhCCCCCEeeEeEEEEE-CCEEEEEEEecCCCcHHHHhhcc----------------------------
Confidence            4778999999999999999999998774 779999999995 6999987632                            


Q ss_pred             CCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          94 RPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        94 ~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                              .|+|.+++.++.||++|| +|||+..    .+.|++|.+
T Consensus       112 --------~l~~~~~~~i~~qi~~aL-~yLH~~~iiHrDiKp~NILl  149 (293)
T d1yhwa1         112 --------CMDEGQIAAVCRECLQAL-EFLHSNQVIHRDIKSDNILL  149 (293)
T ss_dssp             --------CCCHHHHHHHHHHHHHHH-HHHHHTTEECCCCSGGGEEE
T ss_pred             --------CCCHHHHHHHHHHHHHHH-HHHHHCCCcccCCcHHHeEE
Confidence                    589999999999999999 9999854    445888865

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.60  E-value=1.3e-15  Score=120.20  Aligned_cols=88  Identities=14%  Similarity=0.103  Sum_probs=75.7

Q ss_pred             hHHHHHHHHHHHHhhhCC-CCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYR-HPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPAN   89 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLr-HPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (138)
                      +.+.+.+.+|+.+|++|+ ||||+++++.++ +++.+|+||||+. ++|.++|....                       
T Consensus        50 ~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~-~~~~~~ivmE~~~~g~L~~~l~~~~-----------------------  105 (277)
T d1phka_          50 QELREATLKEVDILRKVSGHPNIIQLKDTYE-TNTFFFLVFDLMKKGELFDYLTEKV-----------------------  105 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE-CSSEEEEEEECCTTCBHHHHHHHHS-----------------------
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCeEEEEeecc-cCcceEEEEEcCCCchHHHHHHhcC-----------------------
Confidence            446678899999999998 999999999776 5789999999995 69999998543                       


Q ss_pred             CCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          90 QSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        90 ~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                  .++|.+++.++.||++|| +|||+..    .+.|++|.+
T Consensus       106 ------------~l~e~~~~~~~~qi~~al-~~lH~~~ivHrDlkp~Nill  143 (277)
T d1phka_         106 ------------TLSEKETRKIMRALLEVI-CALHKLNIVHRDLKPENILL  143 (277)
T ss_dssp             ------------SCCHHHHHHHHHHHHHHH-HHHHHTTEECSCCSGGGEEE
T ss_pred             ------------CCCHHHHHHHHHHHHHHH-HHHHHcCCcccccccceEEE
Confidence                        689999999999999999 9999754    445888765

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=1.7e-15  Score=119.16  Aligned_cols=89  Identities=18%  Similarity=0.190  Sum_probs=73.3

Q ss_pred             cchHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          10 RKETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPA   88 (138)
Q Consensus        10 ~~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (138)
                      ..+...+.+.+|+.+|++|+|||||++++.++ + +.+++||||+. ++|.+++....                      
T Consensus        47 ~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~-~-~~~~lvmE~~~~g~L~~~l~~~~----------------------  102 (277)
T d1xbba_          47 NDPALKDELLAEANVMQQLDNPYIVRMIGICE-A-ESWMLVMEMAELGPLNKYLQQNR----------------------  102 (277)
T ss_dssp             --CHHHHHHHHHHHHHHTCCCTTBCCEEEEEE-S-SSEEEEEECCTTEEHHHHHHHCT----------------------
T ss_pred             CCHHHHHHHHHHHHHHHhCCCCCCceEEEEec-c-CCEEEEEEcCCCCcHHHHHhhcc----------------------
Confidence            34456678999999999999999999999764 3 46899999995 79999998532                      


Q ss_pred             CCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          89 NQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        89 ~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                   .+++.++..++.||+.|| +|||+..    .+.|++|..
T Consensus       103 -------------~l~~~~~~~i~~qi~~gl-~ylH~~~iiHrDlKp~Nill  140 (277)
T d1xbba_         103 -------------HVKDKNIIELVHQVSMGM-KYLEESNFVHRDLAARNVLL  140 (277)
T ss_dssp             -------------TCCHHHHHHHHHHHHHHH-HHHHHTTEECSCCSGGGEEE
T ss_pred             -------------CCCHHHHHHHHHHHHHHH-hhHHhCCcccCCCcchhhcc
Confidence                         589999999999999999 9999864    445877754

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=2.1e-15  Score=119.48  Aligned_cols=90  Identities=16%  Similarity=0.129  Sum_probs=73.8

Q ss_pred             cchHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          10 RKETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPA   88 (138)
Q Consensus        10 ~~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (138)
                      ..+...+.+++|+.+|.+|+|||||++++.+++  +.+|+||||+. ++|.+++....                      
T Consensus        48 ~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~~lvmE~~~~g~L~~~l~~~~----------------------  103 (285)
T d1u59a_          48 TEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA--EALMLVMEMAGGGPLHKFLVGKR----------------------  103 (285)
T ss_dssp             CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES--SSEEEEEECCTTEEHHHHHTTCT----------------------
T ss_pred             cCHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc--CeEEEEEEeCCCCcHHHHhhccc----------------------
Confidence            344566788999999999999999999997653  46999999996 69999986432                      


Q ss_pred             CCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          89 NQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        89 ~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                  ..+++.++..++.||++|| +|||+..    .+.|++|..
T Consensus       104 ------------~~l~~~~~~~i~~qi~~gL-~ylH~~~iiHrDlKp~Nill  142 (285)
T d1u59a_         104 ------------EEIPVSNVAELLHQVSMGM-KYLEEKNFVHRDLAARNVLL  142 (285)
T ss_dssp             ------------TTSCHHHHHHHHHHHHHHH-HHHHHTTEECCCCSGGGEEE
T ss_pred             ------------cCCCHHHHHHHHHHHHHHH-HHHHhCCeecCcCchhheee
Confidence                        1589999999999999999 9999854    445777653

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.59  E-value=1.9e-15  Score=120.00  Aligned_cols=91  Identities=14%  Similarity=0.146  Sum_probs=75.6

Q ss_pred             cchHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          10 RKETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPA   88 (138)
Q Consensus        10 ~~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (138)
                      ..+...+.+.+|+++|++|+|||||++++.+. +.+.+++||||+. ++|.+++....                      
T Consensus        66 ~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~-~~~~~~iv~Ey~~~g~L~~~~~~~~----------------------  122 (299)
T d1jpaa_          66 YTEKQRRDFLSEASIMGQFDHPNVIHLEGVVT-KSTPVMIITEFMENGSLDSFLRQND----------------------  122 (299)
T ss_dssp             CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSSCEEEEECCTTEEHHHHHHTTT----------------------
T ss_pred             cCHHHHHHHHHHHHHHHhCCCCCCccEEEEEe-eCCEEEEEEEecCCCcceeeecccc----------------------
Confidence            34556678899999999999999999999775 4678999999995 79999887432                      


Q ss_pred             CCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          89 NQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        89 ~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                  ..+++.++..++.||++|| +|||+..    .+.|++|..
T Consensus       123 ------------~~l~~~~~~~i~~qia~gl-~yLH~~~iiHrDlKp~NILl  161 (299)
T d1jpaa_         123 ------------GQFTVIQLVGMLRGIAAGM-KYLADMNYVHRDLAARNILV  161 (299)
T ss_dssp             ------------TCSCHHHHHHHHHHHHHHH-HHHHHTTCCCSCCCGGGEEE
T ss_pred             ------------CCCCHHHHHHHHHHHHHHH-HHHhhCCCccCccccceEEE
Confidence                        1589999999999999999 9999854    445888764

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.58  E-value=2e-15  Score=123.05  Aligned_cols=86  Identities=14%  Similarity=0.182  Sum_probs=73.0

Q ss_pred             HHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSAS   93 (138)
Q Consensus        15 ~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (138)
                      .+.+++|+.+|++|+|||||++++.++ +.+.+|+|||||. ++|.+.+....                           
T Consensus        70 ~~~~~~Ei~il~~l~HpnIv~~~~~~~-~~~~~~ivmE~~~gg~L~~~~~~~~---------------------------  121 (352)
T d1koba_          70 KYTVKNEISIMNQLHHPKLINLHDAFE-DKYEMVLILEFLSGGELFDRIAAED---------------------------  121 (352)
T ss_dssp             HHHHHHHHHHHTTCCSTTBCCEEEEEE-CSSEEEEEEECCCCCBHHHHTTCTT---------------------------
T ss_pred             HHHHHHHHHHHHhCCCCCCCcEEEEEE-ECCEEEEEEEcCCCChHHHHHHhcC---------------------------
Confidence            467899999999999999999999877 5789999999995 79998876332                           


Q ss_pred             CCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          94 RPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        94 ~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                             ..|+|.+++.++.||++|| +|||+..    .+.|++|.+
T Consensus       122 -------~~l~e~~~~~i~~qi~~aL-~ylH~~~iiHRDiKp~NILl  160 (352)
T d1koba_         122 -------YKMSEAEVINYMRQACEGL-KHMHEHSIVHLDIKPENIMC  160 (352)
T ss_dssp             -------CCBCHHHHHHHHHHHHHHH-HHHHHTTEECCCCCGGGEEE
T ss_pred             -------CCCCHHHHHHHHHHHHHHH-HHHHHCCeeecccccccccc
Confidence                   2699999999999999999 9999754    445888754

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.58  E-value=3.6e-15  Score=119.45  Aligned_cols=89  Identities=11%  Similarity=0.068  Sum_probs=73.6

Q ss_pred             chHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          11 KETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPAN   89 (138)
Q Consensus        11 ~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (138)
                      .+...+.+.+|+.+|++|+|||||++++.+++ .+.+|+|||||. ++|..++....                       
T Consensus        55 ~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~-~~~~~iv~E~~~~g~l~~~~~~~~-----------------------  110 (309)
T d1u5ra_          55 SNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLR-EHTAWLVMEYCLGSASDLLEVHKK-----------------------  110 (309)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEE-TTEEEEEEECCSEEHHHHHHHHTS-----------------------
T ss_pred             CHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEE-CCEEEEEEEecCCCchHHHHHhCC-----------------------
Confidence            35566889999999999999999999998764 779999999996 56665554322                       


Q ss_pred             CCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          90 QSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        90 ~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                  .|+|.+++.++.||++|| +|||+..    .+.|++|.+
T Consensus       111 ------------~l~e~~~~~i~~qi~~aL-~yLH~~~iiHrDiKp~NILl  148 (309)
T d1u5ra_         111 ------------PLQEVEIAAVTHGALQGL-AYLHSHNMIHRDVKAGNILL  148 (309)
T ss_dssp             ------------CCCHHHHHHHHHHHHHHH-HHHHHTTCBCCCCSGGGEEE
T ss_pred             ------------CCCHHHHHHHHHHHHHHH-HHHHhCCEeccCCCcceEEE
Confidence                        689999999999999999 9999864    456888765

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.58  E-value=2.2e-15  Score=119.63  Aligned_cols=87  Identities=13%  Similarity=0.150  Sum_probs=75.3

Q ss_pred             HHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      ...+.+.+|+.+|++|+||||+++++.++ +.+.+|+||||+. ++|.+++....                         
T Consensus        50 ~~~~~~~~E~~il~~l~HpnIv~l~~~~~-~~~~~~ivmEy~~gg~L~~~~~~~~-------------------------  103 (288)
T d1uu3a_          50 NKVPYVTRERDVMSRLDHPFFVKLYFTFQ-DDEKLYFGLSYAKNGELLKYIRKIG-------------------------  103 (288)
T ss_dssp             TCHHHHHHHHHHHHHCCSTTBCCEEEEEE-CSSEEEEEECCCTTEEHHHHHHHHS-------------------------
T ss_pred             HHHHHHHHHHHHHHHcCCCCeeEEEEEEE-ECCEEEEEEEccCCCCHHHhhhccC-------------------------
Confidence            34578899999999999999999999876 5789999999996 69999988543                         


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                .|+|.+++.++.||+.|| +|||+..    .+.|++|.+
T Consensus       104 ----------~l~e~~~~~~~~qi~~al-~ylH~~~iiHrDiKp~NIll  141 (288)
T d1uu3a_         104 ----------SFDETCTRFYTAEIVSAL-EYLHGKGIIHRDLKPENILL  141 (288)
T ss_dssp             ----------SCCHHHHHHHHHHHHHHH-HHHHHTTEECSCCSGGGEEE
T ss_pred             ----------CCCHHHHHHHHHHHHHHH-HhhccccEEcCcCCcccccc
Confidence                      589999999999999999 9999865    456888765

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=2.2e-15  Score=118.60  Aligned_cols=91  Identities=16%  Similarity=0.118  Sum_probs=74.5

Q ss_pred             chHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          11 KETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        11 ~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      .+...+.+.+|+.+|++|+|||||++++.++ +++.+|+||||+.+++..++.....                       
T Consensus        41 ~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~-~~~~~~iv~e~~~~~~~~~~~~~~~-----------------------   96 (298)
T d1gz8a_          41 TEGVPSTAIREISLLKELNHPNIVKLLDVIH-TENKLYLVFEFLHQDLKKFMDASAL-----------------------   96 (298)
T ss_dssp             ---CCHHHHHHHHHHTTCCCTTBCCEEEEEE-ETTEEEEEEECCSEEHHHHHHHTTT-----------------------
T ss_pred             ChHHHHHHHHHHHHHHhCCCCcEEEeccccc-cccceeEEEeecCCchhhhhhhhcc-----------------------
Confidence            3445678899999999999999999999887 4789999999999888777764321                       


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                ..|+|.+++.++.||++|| +|||+..    .+.|++|.+
T Consensus        97 ----------~~l~e~~~~~~~~qil~~L-~yLH~~~IiHrDiKpeNIl~  135 (298)
T d1gz8a_          97 ----------TGIPLPLIKSYLFQLLQGL-AFCHSHRVLHRDLKPQNLLI  135 (298)
T ss_dssp             ----------TCCCHHHHHHHHHHHHHHH-HHHHHTTCCCSCCCGGGEEE
T ss_pred             ----------cCCCHHHHHHHHHHHHHHH-HHhhcCCEEccccCchheee
Confidence                      2699999999999999999 9999755    445888764

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=3.9e-15  Score=117.17  Aligned_cols=90  Identities=21%  Similarity=0.144  Sum_probs=73.8

Q ss_pred             cchHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          10 RKETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPA   88 (138)
Q Consensus        10 ~~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (138)
                      ..+...+.+++|+.+|.+|+|||||++++. . +.+.+++||||+. ++|.++|....                      
T Consensus        43 ~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~-~-~~~~~~lv~Ey~~~g~L~~~l~~~~----------------------   98 (276)
T d1uwha_          43 PTPQQLQAFKNEVGVLRKTRHVNILLFMGY-S-TAPQLAIVTQWCEGSSLYHHLHIIE----------------------   98 (276)
T ss_dssp             CCTTHHHHHHHHHHHHTTCCCTTBCCEEEE-E-CSSSCEEEEECCCEEEHHHHHHTSC----------------------
T ss_pred             CCHHHHHHHHHHHHHHHhCCCCCEeeeeEE-E-eccEEEEEEecCCCCCHHHHHhhcc----------------------
Confidence            334556888999999999999999999984 3 3467999999996 79999997432                      


Q ss_pred             CCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          89 NQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        89 ~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                  ..+++.++..++.||++|| +|||+..    .+.|++|..
T Consensus        99 ------------~~~~~~~~~~i~~qi~~gl-~yLH~~~ivHrDlKp~NiLl  137 (276)
T d1uwha_          99 ------------TKFEMIKLIDIARQTAQGM-DYLHAKSIIHRDLKSNNIFL  137 (276)
T ss_dssp             ------------CCCCHHHHHHHHHHHHHHH-HHHHHTTCCCSCCCGGGEEE
T ss_pred             ------------CCCCHHHHHHHHHHHHHHH-HHHhcCCEeccccCHHHEEE
Confidence                        1588999999999999999 9999754    445887754

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.56  E-value=4.9e-15  Score=116.99  Aligned_cols=87  Identities=15%  Similarity=0.150  Sum_probs=73.7

Q ss_pred             HHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSAS   93 (138)
Q Consensus        15 ~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (138)
                      .+.+++|+++|++|+|||||++++.+. +.+.+++||||+. ++|.++|.....                          
T Consensus        57 ~~~~~~E~~il~~l~HpnIv~~~~~~~-~~~~~~iv~E~~~~g~l~~~l~~~~~--------------------------  109 (287)
T d1opja_          57 VEEFLKEAAVMKEIKHPNLVQLLGVCT-REPPFYIITEFMTYGNLLDYLRECNR--------------------------  109 (287)
T ss_dssp             HHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSSCEEEEECCTTCBHHHHHHHSCT--------------------------
T ss_pred             HHHHHHHHHHHHhCCCCCEecCCccEe-eCCeeEEEeecccCcchHHHhhhccc--------------------------
Confidence            356899999999999999999999776 4678999999996 799999975431                          


Q ss_pred             CCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          94 RPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        94 ~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                             ..+++..+..++.||++|| +|||+..    .+.|++|.+
T Consensus       110 -------~~~~~~~~~~i~~qi~~gL-~yLH~~~iiHrDlKp~NILl  148 (287)
T d1opja_         110 -------QEVSAVVLLYMATQISSAM-EYLEKKNFIHRDLAARNCLV  148 (287)
T ss_dssp             -------TTSCHHHHHHHHHHHHHHH-HHHHHTTCCCSCCSGGGEEE
T ss_pred             -------cchHHHHHHHHHHHHHHHH-HHHHHCCcccCccccCeEEE
Confidence                   2689999999999999999 9999854    445888865

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.53  E-value=1.1e-14  Score=118.05  Aligned_cols=86  Identities=17%  Similarity=0.158  Sum_probs=74.8

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ..+.+.+|+.+|++|+||||+++++.++ +.+.+|+||||+. ++|.+++....                          
T Consensus        48 ~~~~~~~E~~il~~l~hp~Iv~l~~~~~-~~~~~~iv~ey~~gg~L~~~~~~~~--------------------------  100 (337)
T d1o6la_          48 EVAHTVTESRVLQNTRHPFLTALKYAFQ-THDRLCFVMEYANGGELFFHLSRER--------------------------  100 (337)
T ss_dssp             CHHHHHHHHHHHHSCCCTTBCCEEEEEE-CSSEEEEEEECCTTCBHHHHHHHHS--------------------------
T ss_pred             HHHHHHHHHHHHHhCCCCCEEEEEeeec-cccccccceeccCCCchhhhhhccc--------------------------
Confidence            3577889999999999999999999887 4789999999995 79999998643                          


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                               .++|.+++.++.||+.|| +|||+..    .+.|++|.+
T Consensus       101 ---------~~~e~~~~~~~~qil~al-~ylH~~~iiHRDlKP~NILl  138 (337)
T d1o6la_         101 ---------VFTEERARFYGAEIVSAL-EYLHSRDVVYRDIKLENLML  138 (337)
T ss_dssp             ---------CCCHHHHHHHHHHHHHHH-HHHHHTTCBCCCCCGGGEEE
T ss_pred             ---------CCcHHHHHHHHHHHhhhh-hhhhhcCccccccCHHHeEe
Confidence                     589999999999999999 9999864    456888765

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.53  E-value=1.7e-14  Score=112.20  Aligned_cols=90  Identities=13%  Similarity=0.088  Sum_probs=75.6

Q ss_pred             chHHHHHHHHHHHHhhhCCCCCeeEEeceeeecC---CeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCC
Q psy3822          11 KETVTEILRLGVKQLEVYRHPKILSVLHPIEECP---DALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPP   86 (138)
Q Consensus        11 ~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~---~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~   86 (138)
                      .+...+.+++|+.+|++++||||+++++.+++..   ..+|+||||+. ++|.+++....                    
T Consensus        47 ~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~~~lvmE~~~g~~L~~~~~~~~--------------------  106 (277)
T d1o6ya_          47 DPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG--------------------  106 (277)
T ss_dssp             CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEEEEEEEECCCEEEHHHHHHHHC--------------------
T ss_pred             CHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCceEEEEEECCCCCEehhhhcccC--------------------
Confidence            3556788999999999999999999999877533   25899999996 69999887543                    


Q ss_pred             CCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          87 PANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        87 ~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                     .+++.+++.++.||++|| +|||+..    .+.|++|.+
T Consensus       107 ---------------~l~~~~~~~i~~qi~~al-~~lH~~~iiHrDiKP~NIll  144 (277)
T d1o6ya_         107 ---------------PMTPKRAIEVIADACQAL-NFSHQNGIIHRDVKPANIMI  144 (277)
T ss_dssp             ---------------SCCHHHHHHHHHHHHHHH-HHHHHTTEECCCCSGGGEEE
T ss_pred             ---------------CCCHHHHHHHHHHHHHHH-HHHHhCCccCccccCccccc
Confidence                           589999999999999999 9999754    456888865

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.53  E-value=1.4e-14  Score=112.72  Aligned_cols=91  Identities=18%  Similarity=0.222  Sum_probs=75.7

Q ss_pred             CcchHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCC
Q psy3822           9 KRKETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPP   87 (138)
Q Consensus         9 ~~~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~   87 (138)
                      ...+...+.+.+|+.+|++|+|||||++++.+.+  +.+++||||+. ++|.+++....                     
T Consensus        46 ~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~--~~~~iv~E~~~~g~l~~~~~~~~---------------------  102 (273)
T d1mp8a_          46 CTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE--NPVWIIMELCTLGELRSFLQVRK---------------------  102 (273)
T ss_dssp             TTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS--SSCEEEEECCTTEEHHHHHHHTT---------------------
T ss_pred             ccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec--CeEEEEEEeccCCcHHhhhhccC---------------------
Confidence            3446667889999999999999999999998753  57999999995 79999876432                     


Q ss_pred             CCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          88 ANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        88 ~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                   ..+++.++..++.||++|| +|||+..    .+.|+++.+
T Consensus       103 -------------~~l~~~~~~~~~~qi~~gl-~ylH~~~iiHrDlKp~NIll  141 (273)
T d1mp8a_         103 -------------YSLDLASLILYAYQLSTAL-AYLESKRFVHRDIAARNVLV  141 (273)
T ss_dssp             -------------TTSCHHHHHHHHHHHHHHH-HHHHHTTCCCSCCSGGGEEE
T ss_pred             -------------CCCCHHHHHHHHHHHHHHh-hhhcccCeeccccchhheee
Confidence                         2589999999999999999 9999865    445888754

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=4.4e-15  Score=116.45  Aligned_cols=89  Identities=15%  Similarity=0.175  Sum_probs=70.5

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      +.+.+.+.+|+.+|++|+|||||++++.++ +++.+|+||||+.+.+...+....                         
T Consensus        41 ~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~-~~~~~~ivmE~~~~~~~~~~~~~~-------------------------   94 (299)
T d1ua2a_          41 DGINRTALREIKLLQELSHPNIIGLLDAFG-HKSNISLVFDFMETDLEVIIKDNS-------------------------   94 (299)
T ss_dssp             ---CTHHHHHHHHHHHCCCTTBCCEEEEEC-CTTCCEEEEECCSEEHHHHHTTCC-------------------------
T ss_pred             HHHHHHHHHHHHHHHhCCCCCEeEEEeeec-cCCceeehhhhhcchHHhhhhhcc-------------------------
Confidence            344567899999999999999999999876 477899999999765555554221                         


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                               ..++|.+++.++.||+.|| +|||+..    .+.|++|.+
T Consensus        95 ---------~~l~~~~~~~~~~qil~aL-~~lH~~~iiHrDiKp~NIli  133 (299)
T d1ua2a_          95 ---------LVLTPSHIKAYMLMTLQGL-EYLHQHWILHRDLKPNNLLL  133 (299)
T ss_dssp             ---------SSCCSSHHHHHHHHHHHHH-HHHHHTTCCCCCCCGGGEEE
T ss_pred             ---------cCCCHHHHHHHHHHHHHHH-HHhhccceecccCCcceEEe
Confidence                     2588899999999999999 9999854    456888764

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.51  E-value=1.8e-14  Score=111.90  Aligned_cols=85  Identities=15%  Similarity=0.086  Sum_probs=71.7

Q ss_pred             HHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          16 EILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASR   94 (138)
Q Consensus        16 e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (138)
                      +.+.+|+++|++|+|||||++++.+.+ .+.+++||||+. ++|.+++....                            
T Consensus        45 ~~~~~E~~~l~~l~HpnIv~~~g~~~~-~~~~~lv~E~~~~g~L~~~l~~~~----------------------------   95 (263)
T d1sm2a_          45 EDFIEEAEVMMKLSHPKLVQLYGVCLE-QAPICLVFEFMEHGCLSDYLRTQR----------------------------   95 (263)
T ss_dssp             HHHHHHHHHHHHCCCTTBCCEEEEECS-SSSCEEEEECCTTCBHHHHHHTTT----------------------------
T ss_pred             HHHHHHHHHHHhcCCCCcccccceecc-CCceEEEEEecCCCcHHHHhhccc----------------------------
Confidence            567899999999999999999997764 678999999995 79999987432                            


Q ss_pred             CcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          95 PTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        95 ~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                            ..+++..+..++.||++|| +|||+..    .+.|++|.+
T Consensus        96 ------~~~~~~~~~~i~~qia~gl-~~lH~~~iiHrDlKp~Nill  134 (263)
T d1sm2a_          96 ------GLFAAETLLGMCLDVCEGM-AYLEEACVIHRDLAARNCLV  134 (263)
T ss_dssp             ------TCCCHHHHHHHHHHHHHHH-HHHHHTTCCCTTCSGGGEEE
T ss_pred             ------cCCCHHHHHHHHHHHHHHH-Hhhhccceeecccchhheee
Confidence                  1578889999999999999 9999854    445888764

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.51  E-value=3.7e-15  Score=116.70  Aligned_cols=89  Identities=17%  Similarity=0.080  Sum_probs=71.4

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccc-cccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPV-YASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V-~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ..+.+++|+.+|++|+||||+++++.+.+.++.+|+||||+ .++|.++|.....                         
T Consensus        43 ~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~-------------------------   97 (262)
T d1byga_          43 TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR-------------------------   97 (262)
T ss_dssp             --HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTEEHHHHHHHHHH-------------------------
T ss_pred             HHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEeccCCCCHHHHHHhcCC-------------------------
Confidence            44678999999999999999999997755567799999999 4799999975431                         


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                              ..+++..+..++.||++|| .|||+..    .+.|++|..
T Consensus        98 --------~~l~~~~~~~i~~~i~~al-~ylH~~~ivH~dlkp~Nil~  136 (262)
T d1byga_          98 --------SVLGGDCLLKFSLDVCEAM-EYLEGNNFVHRDLAARNVLV  136 (262)
T ss_dssp             --------HHCCHHHHHHHHHHHHHHH-HHHHHTTCCCSCCSGGGEEE
T ss_pred             --------CCCCHHHHHHHHHHHHhhc-cccccCceeccccchHhhee
Confidence                    1488899999999999999 9999854    344777754

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=2e-14  Score=116.02  Aligned_cols=88  Identities=16%  Similarity=0.133  Sum_probs=72.3

Q ss_pred             HHHHHHHHHhhhC-CCCCeeEEeceeeec---CCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          16 EILRLGVKQLEVY-RHPKILSVLHPIEEC---PDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        16 e~lrrEi~~L~rL-rHPnIL~l~e~~ee~---~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      +.+++|+.+|.++ +|||||++++.++..   ++.+|+|||||. ++|.++|..+..                       
T Consensus        49 ~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~ivmEy~~gg~L~~~i~~~~~-----------------------  105 (335)
T d2ozaa1          49 PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGD-----------------------  105 (335)
T ss_dssp             HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCCSEEHHHHHHSCSC-----------------------
T ss_pred             HHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEEEEEECCCCCcHHHHHHhcCC-----------------------
Confidence            4578999998775 899999999987642   357999999996 699999985421                       


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcceee
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAFC  137 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~~  137 (138)
                                ..|+|.+++.++.||++|| +|||+..    .+.|++|.+.
T Consensus       106 ----------~~l~e~~~~~i~~qi~~al-~ylH~~~iiHRDiKp~NIll~  145 (335)
T d2ozaa1         106 ----------QAFTEREASEIMKSIGEAI-QYLHSINIAHRDVKPENLLYT  145 (335)
T ss_dssp             ----------CCEEHHHHHHHHHHHHHHH-HHHHHTTEECCCCSGGGEEES
T ss_pred             ----------CCcCHHHHHHHHHHHHHHH-HHHHHcCCccccccccccccc
Confidence                      2699999999999999999 9999854    5568888653

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.49  E-value=5.4e-14  Score=112.63  Aligned_cols=86  Identities=17%  Similarity=0.188  Sum_probs=73.7

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ..+.+++|+.+|++|+||||+++++.++ +.+.+|+||||+. ++|..++....                          
T Consensus        47 ~~~~~~~E~~il~~l~HpnIv~~~~~~~-~~~~~~ivmE~~~gg~l~~~~~~~~--------------------------   99 (316)
T d1fota_          47 QVEHTNDERLMLSIVTHPFIIRMWGTFQ-DAQQIFMIMDYIEGGELFSLLRKSQ--------------------------   99 (316)
T ss_dssp             CHHHHHHHHHHHHSCCBTTBCCEEEEEE-CSSEEEEEECCCCSCBHHHHHHHTS--------------------------
T ss_pred             HHHHHHHHHHHHHhccCcChhheeeeEe-eCCeeeeEeeecCCccccccccccc--------------------------
Confidence            3577899999999999999999999876 5789999999996 69988887543                          


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                               .+++.+++.++.||+.|| +|||+..    .+.|++|.+
T Consensus       100 ---------~~~~~~~~~~~~qi~~al-~~lH~~~iiHrDiKp~NILl  137 (316)
T d1fota_         100 ---------RFPNPVAKFYAAEVCLAL-EYLHSKDIIYRDLKPENILL  137 (316)
T ss_dssp             ---------SCCHHHHHHHHHHHHHHH-HHHHTTTEECCCCCGGGEEE
T ss_pred             ---------cccccHHHHHHHHHHHhh-hhhccCcEEccccCchheeE
Confidence                     578889999999999999 9999865    456888765

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.49  E-value=2.7e-14  Score=111.01  Aligned_cols=96  Identities=16%  Similarity=0.162  Sum_probs=76.2

Q ss_pred             cCCCCcchHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCC
Q psy3822           5 LHKPKRKETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSS   84 (138)
Q Consensus         5 ~~K~~~~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~   84 (138)
                      +.+....+...+.+.+|+.+|++|+||||+++++.++ +.+.++++||++.+++...+....                  
T Consensus        34 i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~-~~~~~~i~~e~~~~~~~~~~~~~~------------------   94 (286)
T d1ob3a_          34 IRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIH-TKKRLVLVFEHLDQDLKKLLDVCE------------------   94 (286)
T ss_dssp             ECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEE-CSSCEEEEEECCSEEHHHHHHTST------------------
T ss_pred             EehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecc-cCCceeEEEEeehhhhHHHHHhhc------------------
Confidence            3333344555688899999999999999999999887 467899999999876666655321                  


Q ss_pred             CCCCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          85 PPPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                      ..|+|.+++.++.||++|| +|||+..    .+.|++|.+
T Consensus        95 ----------------~~l~~~~~~~i~~qi~~~L-~~LH~~~IvHrDiKp~NIll  133 (286)
T d1ob3a_          95 ----------------GGLESVTAKSFLLQLLNGI-AYCHDRRVLHRDLKPQNLLI  133 (286)
T ss_dssp             ----------------TCCCHHHHHHHHHHHHHHH-HHHHHTTCCCSCCCGGGEEE
T ss_pred             ----------------CCcchhhhHHHHHHHHHHH-HHhccCcEEecCCCCceeeE
Confidence                            2699999999999999999 9999753    445888765

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=5.6e-14  Score=112.09  Aligned_cols=95  Identities=15%  Similarity=0.213  Sum_probs=78.1

Q ss_pred             cCCCCcchHHHHHHHHHHHHhhhCCCCCeeEEeceeeecC-----CeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCC
Q psy3822           5 LHKPKRKETVTEILRLGVKQLEVYRHPKILSVLHPIEECP-----DALAFATEPVYASLASILAFQESPAPNHSTNPVTG   79 (138)
Q Consensus         5 ~~K~~~~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~-----~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~   79 (138)
                      +++....+...+.+.+|+++|++|+|||||++++.+.+..     ..+|+||||+..+|.++++..              
T Consensus        51 i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~--------------  116 (346)
T d1cm8a_          51 LYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHE--------------  116 (346)
T ss_dssp             CSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEEEEECCSEEHHHHHHHC--------------
T ss_pred             EchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccceEEEEEecccccHHHHHHhc--------------
Confidence            4454455667789999999999999999999999876432     258999999988998887632              


Q ss_pred             CCCCCCCCCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          80 GSGSSPPPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                            .|++.+++.++.||+.|| +|||+..    .+.|++|.+
T Consensus       117 ----------------------~l~~~~~~~~~~qi~~aL-~~LH~~~IiHrDiKp~NIL~  154 (346)
T d1cm8a_         117 ----------------------KLGEDRIQFLVYQMLKGL-RYIHAAGIIHRDLKPGNLAV  154 (346)
T ss_dssp             ----------------------CCCHHHHHHHHHHHHHHH-HHHHHTTEECCCCCGGGEEE
T ss_pred             ----------------------cccHHHHHHHHHHHHHHH-HHHHhCCCcccccCcchhhc
Confidence                                  589999999999999999 9999754    556888765

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.46  E-value=7.2e-14  Score=108.85  Aligned_cols=86  Identities=13%  Similarity=0.065  Sum_probs=71.8

Q ss_pred             HHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          16 EILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASR   94 (138)
Q Consensus        16 e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (138)
                      +.+.+|+.+|.+++|||||++++.+.+ ++.+++||||+. ++|.+++....                            
T Consensus        44 ~~~~~Ev~~~~~l~HpnIv~~~g~~~~-~~~~~iv~Ey~~~g~l~~~~~~~~----------------------------   94 (258)
T d1k2pa_          44 DEFIEEAKVMMNLSHEKLVQLYGVCTK-QRPIFIITEYMANGCLLNYLREMR----------------------------   94 (258)
T ss_dssp             HHHHHHHHHHHTCCCTTBCCEEEEECC-SSSEEEEEECCTTEEHHHHHHSGG----------------------------
T ss_pred             HHHHHHHHHHHhcCCCceeeEEEEEee-CCceEEEEEccCCCcHHHhhhccc----------------------------
Confidence            467899999999999999999997764 678999999995 79999987432                            


Q ss_pred             CcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcceee
Q psy3822          95 PTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAFC  137 (138)
Q Consensus        95 ~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~~  137 (138)
                            ..+++.++.+++.||++|| +|||+..    .+.|++|.++
T Consensus        95 ------~~~~~~~~~~i~~qi~~gl-~~LH~~~iiH~dlk~~Nill~  134 (258)
T d1k2pa_          95 ------HRFQTQQLLEMCKDVCEAM-EYLESKQFLHRDLAARNCLVN  134 (258)
T ss_dssp             ------GCCCHHHHHHHHHHHHHHH-HHHHHTTBCCSCCSGGGEEEC
T ss_pred             ------cCCcHHHHHHHHHHHHHHH-HHHhhcCcccccccceeEEEc
Confidence                  2578889999999999999 9999854    4458877654

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=1.2e-13  Score=108.04  Aligned_cols=89  Identities=12%  Similarity=0.083  Sum_probs=73.2

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      +...+.+.+|+.+|++|+|||||++++.+. +.+.+++||||+. +++.+++....                        
T Consensus        50 ~~~~~~~~~E~~il~~l~H~nIv~~~g~~~-~~~~~~~v~e~~~~~~l~~~~~~~~------------------------  104 (283)
T d1mqba_          50 EKQRVDFLGEAGIMGQFSHHNIIRLEGVIS-KYKPMMIITEYMENGALDKFLREKD------------------------  104 (283)
T ss_dssp             HHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSSEEEEEECCTTEEHHHHHHHTT------------------------
T ss_pred             hHHHHHHHHHHHHHHhcCCCCEeeeeEEEe-cCCceEEEEEecccCcchhhhhccc------------------------
Confidence            444566889999999999999999999776 4678999999995 68888877543                        


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                ..+++.++..++.||+.|| +|||+..    .+.|++|..
T Consensus       105 ----------~~~~~~~~~~i~~~i~~gl-~~lH~~~iiHrDlKp~NILl  143 (283)
T d1mqba_         105 ----------GEFSVLQLVGMLRGIAAGM-KYLANMNYVHRDLAARNILV  143 (283)
T ss_dssp             ----------TCSCHHHHHHHHHHHHHHH-HHHHHTTCCCSCCCGGGEEE
T ss_pred             ----------ccccHHHHHHHHHHHHHhh-hhccccccccCccccceEEE
Confidence                      1588899999999999999 9999854    555888754

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=9.3e-14  Score=110.02  Aligned_cols=103  Identities=16%  Similarity=0.121  Sum_probs=74.5

Q ss_pred             HHHHHHHHHHHHhhhC-CCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVY-RHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rL-rHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      ...+.+.+|+.+|.+| +|||||++++.+.+ .+.+++||||+. ++|.++|........+             ..    
T Consensus        52 ~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~-~~~~~iV~ey~~~g~L~~~l~~~~~~~~~-------------~~----  113 (309)
T d1fvra_          52 DDHRDFAGELEVLCKLGHHPNIINLLGACEH-RGYLYLAIEYAPHGNLLDFLRKSRVLETD-------------PA----  113 (309)
T ss_dssp             ---CHHHHHHHHHTTCCCCTTBCCEEEEEEE-TTEEEEEECCCTTCBHHHHHHTTCHHHHC-------------HH----
T ss_pred             HHHHHHHHHHHHHHhccCCCCEeeEEEEEec-CCeeEEEEEecCCCcHHHHHhhccccccc-------------hh----
Confidence            3456789999999999 79999999998774 779999999995 7999999754210000             00    


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                        ..........|++.++.+++.||++|| .|||+..    .+.|++|.+
T Consensus       114 --~~~~~~~~~~l~~~~~~~~~~qia~gl-~~lH~~~iiHrDlkp~NIL~  160 (309)
T d1fvra_         114 --FAIANSTASTLSSQQLLHFAADVARGM-DYLSQKQFIHRDLAARNILV  160 (309)
T ss_dssp             --HHHHTTBSCSSCHHHHHHHHHHHHHHH-HHHHHTTEECSCCSGGGEEE
T ss_pred             --hhccccccCCCCHHHHHHHHHHHHHHH-HhhhcCCccccccccceEEE
Confidence              000000123699999999999999999 9999864    445888764

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=6.1e-14  Score=112.01  Aligned_cols=111  Identities=14%  Similarity=0.069  Sum_probs=73.8

Q ss_pred             hHHHHHHHHHHHHhhhC-CCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVY-RHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPAN   89 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rL-rHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (138)
                      +...+.+.+|+.+|.+| +|||||++++.++ +.+.+++|||||. ++|.++|.........           ......+
T Consensus        81 ~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~-~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~-----------~~~~~~~  148 (325)
T d1rjba_          81 SSEREALMSELKMMTQLGSHENIVNLLGACT-LSGPIYLIFEYCCYGDLLNYLRSKREKFSE-----------DEIEYEN  148 (325)
T ss_dssp             ---CHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSSCEEEEECCTTCBHHHHHHTTTTCC--------------------
T ss_pred             HHHHHHHHHHHHHHHHhcCCCcEeEEEEEEe-eCCeEEEEEEcCCCCcHHHHHHhccCCCcc-----------hhhhhcc
Confidence            44456789999999998 8999999999776 4678999999995 7999999865321000           0000000


Q ss_pred             CCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          90 QSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        90 ~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                      . ...........|++.++..++.||++|| +|||+..    .+.|++|.+
T Consensus       149 ~-~~~~~~~~~~~l~~~~~~~i~~qi~~gl-~yLH~~~IiHRDlKp~Nill  197 (325)
T d1rjba_         149 Q-KRLEEEEDLNVLTFEDLLCFAYQVAKGM-EFLEFKSCVHRDLAARNVLV  197 (325)
T ss_dssp             -------------CCHHHHHHHHHHHHHHH-HHHHHTTEEETTCSGGGEEE
T ss_pred             c-cccccccccCCCCHHHHHHHHHHHHHHH-HHHHhCCeeeccCchhcccc
Confidence            0 0000011123699999999999999999 9999865    445888764

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.44  E-value=1.9e-13  Score=109.03  Aligned_cols=92  Identities=10%  Similarity=0.002  Sum_probs=75.8

Q ss_pred             cchHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          10 RKETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPA   88 (138)
Q Consensus        10 ~~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (138)
                      ..+...+.+++|+.+|.+|+|||||++++...+.+..+++||||+. ++|.+++....                      
T Consensus        67 ~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~~~~g~l~~~~~~~~----------------------  124 (311)
T d1r0pa_          67 TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNET----------------------  124 (311)
T ss_dssp             CCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEECCTTCBHHHHHHCTT----------------------
T ss_pred             cCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEEeecCchhhhhcccc----------------------
Confidence            3455668899999999999999999999976666678999999995 79999987432                      


Q ss_pred             CCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          89 NQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        89 ~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                  ..+++.++..++.||++|| .|||+..    .+.|++|.+
T Consensus       125 ------------~~~~~~~~~~i~~qia~gL-~~lH~~~iiHrDLK~~NILl  163 (311)
T d1r0pa_         125 ------------HNPTVKDLIGFGLQVAKGM-KFLASKKFVHRDLAARNCML  163 (311)
T ss_dssp             ------------CCCBHHHHHHHHHHHHHHH-HHHHHTTCCCSCCSGGGEEE
T ss_pred             ------------ccchHHHHHHHHHHHHHhh-hhhcccCcccCCccHHhEeE
Confidence                        1467778889999999999 9999754    455887764

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.44  E-value=1.1e-13  Score=108.51  Aligned_cols=89  Identities=16%  Similarity=0.143  Sum_probs=73.6

Q ss_pred             chHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          11 KETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPAN   89 (138)
Q Consensus        11 ~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (138)
                      .+...+.+.+|+.+|++|+|||||++++.+++  +.+++||||+. ++|.+.+....                       
T Consensus        51 ~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~--~~~~lv~e~~~~~~l~~~~~~~~-----------------------  105 (273)
T d1u46a_          51 QPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT--PPMKMVTELAPLGSLLDRLRKHQ-----------------------  105 (273)
T ss_dssp             -CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS--SSCEEEEECCTTCBHHHHHHHHG-----------------------
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee--cchheeeeeecCcchhhhhhccc-----------------------
Confidence            34566788999999999999999999998764  46899999995 79999887543                       


Q ss_pred             CCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          90 QSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        90 ~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                 ..|++.++..++.||++|| +|||+..    .+.|++|..
T Consensus       106 -----------~~l~~~~~~~~~~qi~~gl-~ylH~~~iiHrDikp~NIll  144 (273)
T d1u46a_         106 -----------GHFLLGTLSRYAVQVAEGM-GYLESKRFIHRDLAARNLLL  144 (273)
T ss_dssp             -----------GGSCHHHHHHHHHHHHHHH-HHHHHTTEECSCCCGGGEEE
T ss_pred             -----------CCCCHHHHHHHHHHHHHHH-HHhhhCCEeeeeecHHHhcc
Confidence                       1589999999999999999 9999854    445887754

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.44  E-value=1.8e-13  Score=111.15  Aligned_cols=87  Identities=16%  Similarity=0.107  Sum_probs=74.8

Q ss_pred             HHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      ..+.+.+|+.+|++|+||||+++++.++ +.+.+++||||+. ++|.+.+....                          
T Consensus        84 ~~~~~~~E~~il~~l~hpnIv~~~~~~~-~~~~~~~v~e~~~~g~l~~~l~~~~--------------------------  136 (350)
T d1rdqe_          84 QIEHTLNEKRILQAVNFPFLVKLEFSFK-DNSNLYMVMEYVAGGEMFSHLRRIG--------------------------  136 (350)
T ss_dssp             CHHHHHHHHHHHTTCCCTTBCCEEEEEE-CSSEEEEEEECCTTCBHHHHHHHHC--------------------------
T ss_pred             HHHHHHHHHHHHHHcCCCcEeecccccc-cccccccccccccccchhhhHhhcC--------------------------
Confidence            3567899999999999999999999776 4779999999995 69999997543                          


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcceee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAFC  137 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~~  137 (138)
                               .|+|.+++.++.||+.|| +|||+..    .+.|++|.+.
T Consensus       137 ---------~l~e~~~~~i~~qi~~aL-~yLH~~~iiHRDIKP~NILl~  175 (350)
T d1rdqe_         137 ---------RFSEPHARFYAAQIVLTF-EYLHSLDLIYRDLKPENLLID  175 (350)
T ss_dssp             ---------CCCHHHHHHHHHHHHHHH-HHHHHTTEECCCCSGGGEEEC
T ss_pred             ---------CCCHHHHHHHHHHHHHHH-HHHHhCCEecCcCCHHHcccC
Confidence                     589999999999999999 9999754    4568888764

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.43  E-value=5.4e-14  Score=109.78  Aligned_cols=85  Identities=9%  Similarity=0.138  Sum_probs=69.9

Q ss_pred             HHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          16 EILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASR   94 (138)
Q Consensus        16 e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (138)
                      +.+.+|+.+|.+|+|||||++++...  .+.+++||||+. ++|.+++....                            
T Consensus        53 ~~~~~E~~~l~~l~HpnIv~~~g~~~--~~~~~iv~Ey~~~g~L~~~~~~~~----------------------------  102 (272)
T d1qpca_          53 DAFLAEANLMKQLQHQRLVRLYAVVT--QEPIYIITEYMENGSLVDFLKTPS----------------------------  102 (272)
T ss_dssp             HHHHHHHHHHHHCCCTTBCCEEEEEC--SSSCEEEEECCTTCBHHHHTTSHH----------------------------
T ss_pred             HHHHHHHHHHHhCCCCCEeEEEeeec--cCCeEEEEEeCCCCcHHHHHhhcC----------------------------
Confidence            56899999999999999999999654  356899999995 79999876432                            


Q ss_pred             CcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          95 PTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        95 ~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                           ...|++.++..++.||++|| +|||+..    .+.|++|..
T Consensus       103 -----~~~l~~~~~~~i~~qi~~gl-~~lH~~~ivHrDiKp~NIll  142 (272)
T d1qpca_         103 -----GIKLTINKLLDMAAQIAEGM-AFIEERNYIHRDLRAANILV  142 (272)
T ss_dssp             -----HHTCCHHHHHHHHHHHHHHH-HHHHHTTEECSCCSGGGEEE
T ss_pred             -----CCCCCHHHHHHHHHHHHHHH-HHHHhCCcccCccchhheee
Confidence                 12589999999999999999 9999854    445777753

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.42  E-value=1.9e-13  Score=108.42  Aligned_cols=95  Identities=17%  Similarity=0.231  Sum_probs=73.8

Q ss_pred             cCCCCcchHHHHHHHHHHHHhhhCCCCCeeEEeceeee-----cCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCC
Q psy3822           5 LHKPKRKETVTEILRLGVKQLEVYRHPKILSVLHPIEE-----CPDALAFATEPVYASLASILAFQESPAPNHSTNPVTG   79 (138)
Q Consensus         5 ~~K~~~~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee-----~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~   79 (138)
                      ++|........+.+.+|+.+|++|+||||+++++.+..     +...+++++|+..++|.+++..+              
T Consensus        51 i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~~~~i~~~~~gg~L~~~~~~~--------------  116 (348)
T d2gfsa1          51 LSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--------------  116 (348)
T ss_dssp             CSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCCCCEEEEECCSEEHHHHHTTC--------------
T ss_pred             ECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCceEEEEEeecCCchhhhcccc--------------
Confidence            44444445556788999999999999999999997742     23346666666678999998621              


Q ss_pred             CCCCCCCCCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          80 GSGSSPPPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                            .|+|.+++.++.||+.|| +|||+..    .+.|++|.+
T Consensus       117 ----------------------~l~e~~~~~i~~qil~aL-~~LH~~giiHrDiKp~NILi  154 (348)
T d2gfsa1         117 ----------------------KLTDDHVQFLIYQILRGL-KYIHSADIIHRDLKPSNLAV  154 (348)
T ss_dssp             ----------------------CCCHHHHHHHHHHHHHHH-HHHHHTTCCCCCCCGGGEEE
T ss_pred             ----------------------cccHHHHHHHHHHHHHHH-HHHHhCCCcccccCCccccc
Confidence                                  589999999999999999 9999764    445888764

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.42  E-value=3.1e-13  Score=110.19  Aligned_cols=83  Identities=14%  Similarity=0.186  Sum_probs=70.5

Q ss_pred             HHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          17 ILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASRP   95 (138)
Q Consensus        17 ~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   95 (138)
                      ..++|+++|+.++||||+++++.++ +.+.+|+||||+. ++|.++|.+..                             
T Consensus        53 ~e~~~~~~l~~~~hpnIv~l~~~~~-~~~~~~ivmE~~~gg~L~~~l~~~~-----------------------------  102 (364)
T d1omwa3          53 NERIMLSLVSTGDCPFIVCMSYAFH-TPDKLSFILDLMNGGDLHYHLSQHG-----------------------------  102 (364)
T ss_dssp             HHHHHHHHHSSSCCTTBCCEEEEEE-CSSEEEEEECCCCSCBHHHHHHHHC-----------------------------
T ss_pred             HHHHHHHHHhcCCCCcEEEEEEEEE-ECCEEEEEEEecCCCcHHHHHHhcc-----------------------------
Confidence            3355688888899999999999877 4779999999996 79999998543                             


Q ss_pred             cccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          96 THAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        96 ~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                            .++|.+++.++.||+.|| +|||+..    .+.|++|.+
T Consensus       103 ------~~~e~~~~~~~~qi~~aL-~ylH~~~iiHrDlKP~NILl  140 (364)
T d1omwa3         103 ------VFSEADMRFYAAEIILGL-EHMHNRFVVYRDLKPANILL  140 (364)
T ss_dssp             ------SCCHHHHHHHHHHHHHHH-HHHHHTTEECCCCSGGGEEE
T ss_pred             ------cccHHHHHHHHHHHHHHH-HHHHHCCccceeeccceeEE
Confidence                  588999999999999999 9999855    556888865

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.42  E-value=2.2e-13  Score=109.48  Aligned_cols=90  Identities=14%  Similarity=0.139  Sum_probs=73.8

Q ss_pred             CcchHHHHHHHHHHHHhhhCCCCCeeEEeceeee-----cCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCC
Q psy3822           9 KRKETVTEILRLGVKQLEVYRHPKILSVLHPIEE-----CPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGS   83 (138)
Q Consensus         9 ~~~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee-----~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~   83 (138)
                      ...+...+.+.+|+.+|++|+||||+++++.+..     +.+.+|+||||+.+++.+.+.                    
T Consensus        54 ~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~~~iv~Ey~~~~l~~~~~--------------------  113 (355)
T d2b1pa1          54 FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ--------------------  113 (355)
T ss_dssp             TSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEEEEECCSEEHHHHHT--------------------
T ss_pred             hcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCceeEEEEeccchHHHHhhh--------------------
Confidence            3345566788999999999999999999998752     346899999999988877664                    


Q ss_pred             CCCCCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          84 SPPPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                       ..+++.+++.++.||+.|| +|||+..    .+.|+++.+
T Consensus       114 -----------------~~~~~~~i~~~~~qil~gl-~~LH~~giiHrDlKP~Nil~  152 (355)
T d2b1pa1         114 -----------------MELDHERMSYLLYQMLCGI-KHLHSAGIIHRDLKPSNIVV  152 (355)
T ss_dssp             -----------------SCCCHHHHHHHHHHHHHHH-HHHHHTTCCCSCCCGGGEEE
T ss_pred             -----------------cCCCHHHHHHHHHHHHHHH-HHhhhcccccccCCcccccc
Confidence                             1588999999999999999 9999864    445877654

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.41  E-value=3.4e-13  Score=108.10  Aligned_cols=85  Identities=13%  Similarity=0.151  Sum_probs=69.9

Q ss_pred             HHHHHHHHHHhh-hCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          15 TEILRLGVKQLE-VYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        15 ~e~lrrEi~~L~-rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      .+.+.+|+.+|. .++||||+++++.++ +++.+|+||||+. ++|.+++....                          
T Consensus        46 ~~~~~~e~~~l~~~~~hp~Iv~~~~~~~-~~~~~yivmEy~~~g~L~~~i~~~~--------------------------   98 (320)
T d1xjda_          46 VECTMVEKRVLSLAWEHPFLTHMFCTFQ-TKENLFFVMEYLNGGDLMYHIQSCH--------------------------   98 (320)
T ss_dssp             HHHHHHHHHHHHHHTTCTTBCCEEEEEE-CSSEEEEEEECCTTCBHHHHHHHHS--------------------------
T ss_pred             HHHHHHHHHHHHHhCCCCcEEEEEEEEc-cCCceeEEEeecCCCcHHHHhhccC--------------------------
Confidence            355667777665 699999999999876 4789999999995 69999998543                          


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                               .++|.+++.++.||+.|| +|||+..    .+.|+++.+
T Consensus        99 ---------~~~e~~~~~~~~qi~~al-~ylH~~~iiHrDikp~NiL~  136 (320)
T d1xjda_          99 ---------KFDLSRATFYAAEIILGL-QFLHSKGIVYRDLKLDNILL  136 (320)
T ss_dssp             ---------SCCHHHHHHHHHHHHHHH-HHHHHTTCBCCCCCGGGEEE
T ss_pred             ---------CCCHHHHHHHHHHHHHHH-HHHHhCCeeeccCcccceee
Confidence                     588999999999999999 9999864    345887765

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.41  E-value=3.7e-13  Score=103.67  Aligned_cols=93  Identities=11%  Similarity=0.010  Sum_probs=76.3

Q ss_pred             CCCcchHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCC
Q psy3822           7 KPKRKETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSP   85 (138)
Q Consensus         7 K~~~~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~   85 (138)
                      +....+...+.+++|+.+|++|+||||+++++.++ +.+.+++|||++. ++|..++....                   
T Consensus        37 ~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~-~~~~~~iv~~~~~~~~l~~~~~~~~-------------------   96 (292)
T d1unla_          37 LDDDDEGVPSSALREICLLKELKHKNIVRLHDVLH-SDKKLTLVFEFCDQDLKKYFDSCNG-------------------   96 (292)
T ss_dssp             SSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEE-CSSEEEEEEECCSEEHHHHHHHTTT-------------------
T ss_pred             hhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccc-cccceeEEeeecccccccccccccc-------------------
Confidence            33445667889999999999999999999999776 5789999999996 47777665322                   


Q ss_pred             CCCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          86 PPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        86 ~~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                      .+++.+++.++.|+++|| +|||+..    .+.|+++.+
T Consensus        97 ----------------~~~~~~~~~~~~q~~~aL-~~lH~~~IvHrDiKP~NIli  134 (292)
T d1unla_          97 ----------------DLDPEIVKSFLFQLLKGL-GFCHSRNVLHRDLKPQNLLI  134 (292)
T ss_dssp             ----------------CCCHHHHHHHHHHHHHHH-HHHHHTTEECCCCSGGGEEE
T ss_pred             ----------------ccchhHHHHHHHHHHHHH-HHhhcCCEeeecccCccccc
Confidence                            578899999999999999 9999854    455888865

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.40  E-value=3.1e-13  Score=107.30  Aligned_cols=88  Identities=9%  Similarity=0.053  Sum_probs=70.6

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccc-cccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPV-YASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQ   90 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V-~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (138)
                      +...+.+.+|+.+|++|+|||||++++.+.+  +..+++||++ .++|.+.+....                        
T Consensus        52 ~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~--~~~~~v~e~~~~~~l~~~~~~~~------------------------  105 (317)
T d1xkka_          52 PKANKEILDEAYVMASVDNPHVCRLLGICLT--STVQLITQLMPFGCLLDYVREHK------------------------  105 (317)
T ss_dssp             -CTHHHHHHHHHHHHHCCCTTBCCEEEEEES--SSEEEEEECCTTCBHHHHHHHTS------------------------
T ss_pred             HHHHHHHHHHHHHHHhCCCCCEeeEEEEEec--CCeeEEEEeccCCcccccccccc------------------------
Confidence            3445778999999999999999999997764  3577888887 579999887543                        


Q ss_pred             CCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          91 SASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        91 ~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                ..+++.++..++.||++|| +|||+..    .+.|++|..
T Consensus       106 ----------~~~~~~~~~~i~~qi~~gl-~yLH~~~iiHrDlKp~NIll  144 (317)
T d1xkka_         106 ----------DNIGSQYLLNWCVQIAKGM-NYLEDRRLVHRDLAARNVLV  144 (317)
T ss_dssp             ----------SSCCHHHHHHHHHHHHHHH-HHHHHTTCCCSCCCGGGEEE
T ss_pred             ----------cCCCHHHHHHHHHHHHHHH-HHHHHcCcccCcchhhccee
Confidence                      2688999999999999999 9999854    334777653

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=2.6e-13  Score=107.29  Aligned_cols=85  Identities=16%  Similarity=0.166  Sum_probs=70.6

Q ss_pred             HHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          16 EILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASR   94 (138)
Q Consensus        16 e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (138)
                      +.+.+|+.+|.+|+|||||++++.+.+  +.+++||||+. |+|.+++.....                           
T Consensus        57 ~~~~~E~~~l~~l~h~nIv~~~g~~~~--~~~~lv~Ey~~~g~l~~~~~~~~~---------------------------  107 (285)
T d1fmka3          57 EAFLQEAQVMKKLRHEKLVQLYAVVSE--EPIYIVTEYMSKGSLLDFLKGETG---------------------------  107 (285)
T ss_dssp             HHHHHHHHHHHHCCCTTBCCEEEEECS--SSCEEEECCCTTCBHHHHHSHHHH---------------------------
T ss_pred             HHHHHHHHHHHhcccCCEeEEEEEEec--CCeEEEEEecCCCchhhhhhhccc---------------------------
Confidence            568999999999999999999997643  56899999995 799998875321                           


Q ss_pred             CcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          95 PTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        95 ~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                            ..|++.++..++.||+.|| +|||+..    .+.|++|.+
T Consensus       108 ------~~l~~~~~~~i~~~i~~gl-~~LH~~~ivH~DlKp~NIll  146 (285)
T d1fmka3         108 ------KYLRLPQLVDMAAQIASGM-AYVERMNYVHRDLRAANILV  146 (285)
T ss_dssp             ------TTCCHHHHHHHHHHHHHHH-HHHHHTTCCCSCCSGGGEEE
T ss_pred             ------ccchHHHHHHHHHHHHHHH-HHHhhhheecccccceEEEE
Confidence                  1589999999999999999 9999864    445887764

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=4.3e-13  Score=107.58  Aligned_cols=87  Identities=11%  Similarity=0.041  Sum_probs=69.0

Q ss_pred             HHHHHHHhhhCCCCCeeEEeceeeec-----CCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          18 LRLGVKQLEVYRHPKILSVLHPIEEC-----PDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        18 lrrEi~~L~rLrHPnIL~l~e~~ee~-----~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      .++|+.+|++|+||||+++++.+.+.     ..++|+||||+.+++...+......                        
T Consensus        60 ~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~Ey~~~~~~~~l~~~~~~------------------------  115 (350)
T d1q5ka_          60 KNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA------------------------  115 (350)
T ss_dssp             CCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEEEEECCSEEHHHHHHHHHHT------------------------
T ss_pred             HHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEEEEeccCCccHHHHHhhhhc------------------------
Confidence            35899999999999999999987542     3469999999988777666532211                        


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                             ...|+|.+++.++.||++|| +|||+..    .+.|++|.+
T Consensus       116 -------~~~l~~~~~~~i~~qil~aL-~yLH~~~IiHrDiKp~NILl  155 (350)
T d1q5ka_         116 -------KQTLPVIYVKLYMYQLFRSL-AYIHSFGICHRDIKPQNLLL  155 (350)
T ss_dssp             -------TCCCCHHHHHHHHHHHHHHH-HHHHTTTEECCCCCGGGEEE
T ss_pred             -------cCCCCHHHHHHHHHHHHHHH-HHHHhcCCcccCCCcceEEE
Confidence                   12699999999999999999 9999854    456888865

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.37  E-value=1.2e-12  Score=103.04  Aligned_cols=115  Identities=11%  Similarity=0.085  Sum_probs=78.5

Q ss_pred             CcchHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCC
Q psy3822           9 KRKETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPP   87 (138)
Q Consensus         9 ~~~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~   87 (138)
                      ...+...+.+++|+.+|++|+||||+++++.+. +.+.++++|||+. ++|.++|.........    ..     .....
T Consensus        54 ~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~-~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~----~~-----~~~~~  123 (301)
T d1lufa_          54 EASADMQADFQREAALMAEFDNPNIVKLLGVCA-VGKPMCLLFEYMAYGDLNEFLRSMSPHTVC----SL-----SHSDL  123 (301)
T ss_dssp             TCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSSCEEEEECCTTCBHHHHHHHTCC--------------------
T ss_pred             hcChHHHHHHHHHHHHHHhcCCCCcccceeeec-cCCceEEEEEecCCCcHHHHHHhcCccccc----cc-----ccccc
Confidence            344556778899999999999999999999876 4678999999995 7999999764421100    00     00000


Q ss_pred             CCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCC----CCcccCccee
Q psy3822          88 ANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVP----STYLPSSVAF  136 (138)
Q Consensus        88 ~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~----a~~~~~~~~~  136 (138)
                      ...  ..........|++.++.+++.||++|| +|||+.    ..+.|++|.+
T Consensus       124 ~~~--~~~~~~~~~~l~~~~~~~i~~qi~~gl-~ylH~~~ivHrDlKp~NILl  173 (301)
T d1lufa_         124 STR--ARVSSPGPPPLSCAEQLCIARQVAAGM-AYLSERKFVHRDLATRNCLV  173 (301)
T ss_dssp             -------------CCCCHHHHHHHHHHHHHHH-HHHHHTTCCCSCCSGGGEEE
T ss_pred             chh--hhccccCCCCCCHHHHHHHHHHHHHHh-hhcccCCeEeeEEcccceEE
Confidence            000  000011122689999999999999999 999984    4666888765

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.36  E-value=9.3e-13  Score=105.44  Aligned_cols=91  Identities=21%  Similarity=0.221  Sum_probs=73.6

Q ss_pred             cchHHHHHHHHHHHHhhhCCCCCeeEEeceeeecC----CeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCC
Q psy3822          10 RKETVTEILRLGVKQLEVYRHPKILSVLHPIEECP----DALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSP   85 (138)
Q Consensus        10 ~~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~----~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~   85 (138)
                      ..+...+.+.+|+.+|++|+||||+++++.+....    ..+++++|...++|.+++...                    
T Consensus        45 ~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~~l~~~~~~g~L~~~l~~~--------------------  104 (345)
T d1pmea_          45 EHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQ--------------------  104 (345)
T ss_dssp             TCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEEEECCCEEHHHHHHHC--------------------
T ss_pred             cChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceEEEEEeecCCchhhhhhcC--------------------
Confidence            34566778899999999999999999999775422    246777776678999999742                    


Q ss_pred             CCCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcceee
Q psy3822          86 PPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAFC  137 (138)
Q Consensus        86 ~~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~~  137 (138)
                                      .|+|.+++.++.||+.|| +|||+..    .+.|++|.++
T Consensus       105 ----------------~l~~~~i~~i~~qil~al-~yLH~~~iiHRDIKp~NILl~  143 (345)
T d1pmea_         105 ----------------HLSNDHICYFLYQILRGL-KYIHSANVLHRDLKPSNLLLN  143 (345)
T ss_dssp             ----------------CCCHHHHHHHHHHHHHHH-HHHHHTTEECCCCCGGGEEEC
T ss_pred             ----------------CCCHHHHHHHHHHHHHHH-HHHHHCCCcCCCCCcceEEEC
Confidence                            589999999999999999 9999754    4458888764

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.36  E-value=1.1e-12  Score=103.31  Aligned_cols=107  Identities=17%  Similarity=0.184  Sum_probs=77.9

Q ss_pred             CcchHHHHHHHHHHHHhhhC-CCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCC
Q psy3822           9 KRKETVTEILRLGVKQLEVY-RHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPP   86 (138)
Q Consensus         9 ~~~e~~~e~lrrEi~~L~rL-rHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~   86 (138)
                      ...+.....+.+|+..|.++ +|||||++++.+.+ ++.+++||||+. ++|.++|........            ....
T Consensus        56 ~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~-~~~~~~v~e~~~~g~l~~~i~~~~~~~~------------~~~~  122 (299)
T d1fgka_          56 DATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ-DGPLYVIVEYASKGNLREYLQARRPPGL------------EYSY  122 (299)
T ss_dssp             TCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSSCEEEECCCTTCBHHHHHHTTSCC------------------
T ss_pred             ccChHHHHHHHHHHHHHHHhcCCCeEEeccccccc-CCeEEEEEEccCCCcHHHHHHhhcCCcc------------cccc
Confidence            44455567789999999998 89999999998774 678999999995 799999986542100            0000


Q ss_pred             CCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          87 PANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        87 ~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                             .........|++.++..++.||+.|| +|||+..    .+.|++|.+
T Consensus       123 -------~~~~~~~~~l~~~~~~~~~~qi~~al-~ylH~~~ivHrDiKp~NiLl  168 (299)
T d1fgka_         123 -------NPSHNPEEQLSSKDLVSCAYQVARGM-EYLASKKCIHRDLAARNVLV  168 (299)
T ss_dssp             -------------CCCCCHHHHHHHHHHHHHHH-HHHHHTTCCCSCCSGGGEEE
T ss_pred             -------ccccCccccCCHHHHHHHHHHHHHHH-HHhhhCCEEeeeecccceee
Confidence                   00001123699999999999999999 9999854    556888753

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.35  E-value=1.1e-12  Score=103.85  Aligned_cols=108  Identities=15%  Similarity=0.067  Sum_probs=77.4

Q ss_pred             cchHHHHHHHHHHHHhhhC-CCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          10 RKETVTEILRLGVKQLEVY-RHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPP   87 (138)
Q Consensus        10 ~~e~~~e~lrrEi~~L~rL-rHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~   87 (138)
                      ........+.+|+.+|++| +|||||++++.++ +++.+++||||+. ++|.++|.........          ...+  
T Consensus        65 ~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~-~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~----------~~~~--  131 (311)
T d1t46a_          65 AHLTEREALMSELKVLSYLGNHMNIVNLLGACT-IGGPTLVITEYCCYGDLLNFLRRKRDSFIC----------SKTS--  131 (311)
T ss_dssp             CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSSCEEEEECCTTEEHHHHHHHTTTTC------------------
T ss_pred             cCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEe-eCCEEEEEEEcCCCCCHHHHHHhccccccc----------cccc--
Confidence            3345556789999999999 6999999999776 4678999999995 7999999865432100          0000  


Q ss_pred             CCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          88 ANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        88 ~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                           ..........+++.++..++.||++|| +|||+..    .+.|++|.+
T Consensus       132 -----~~~~~~~~~~l~~~~~~~~~~qi~~gl-~~LH~~~ivHrDLKp~NIl~  178 (311)
T d1t46a_         132 -----PAIMEDDELALDLEDLLSFSYQVAKGM-AFLASKNCIHRDLAARNILL  178 (311)
T ss_dssp             -------------CCCCHHHHHHHHHHHHHHH-HHHHHTTCCCSCCSGGGEEE
T ss_pred             -----cccccccccCCCHHHHHHHHHHHHHHH-HHHHhCCeeecccccccccc
Confidence                 000011223699999999999999999 9999865    445888865

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.34  E-value=1.3e-12  Score=101.74  Aligned_cols=84  Identities=12%  Similarity=0.020  Sum_probs=71.2

Q ss_pred             HHHHHHHHhhhCC--CCCeeEEeceeeecCCeEEEEecccc--ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          17 ILRLGVKQLEVYR--HPKILSVLHPIEECPDALAFATEPVY--ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        17 ~lrrEi~~L~rLr--HPnIL~l~e~~ee~~~~L~fVtE~V~--~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      .+.+|+.+|++|+  ||||+++++.++ +.+.+++|||++.  +++.+++....                          
T Consensus        53 ~~~~E~~il~~l~~~h~nIv~~~~~~~-~~~~~~lv~e~~~~~~~l~~~~~~~~--------------------------  105 (273)
T d1xwsa_          53 RVPMEVVLLKKVSSGFSGVIRLLDWFE-RPDSFVLILERPEPVQDLFDFITERG--------------------------  105 (273)
T ss_dssp             EEEHHHHHHHHHCSSSCSBCCEEEEEE-CSSEEEEEEECCSSEEEHHHHHHHHC--------------------------
T ss_pred             HHHHHHHHHHHhccCCCCccEEEEEEe-eCCeEEEEEEeccCcchHHHHHhccC--------------------------
Confidence            3578999999997  999999999776 5789999999985  48888887543                          


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcceee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAFC  137 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~~  137 (138)
                               .++|.+++.++.||++|| +|||+..    .+.|++|.+.
T Consensus       106 ---------~l~e~~~~~~~~qi~~al-~~lH~~~iiHrDiKp~NIll~  144 (273)
T d1xwsa_         106 ---------ALQEELARSFFWQVLEAV-RHCHNCGVLHRDIKDENILID  144 (273)
T ss_dssp             ---------SCCHHHHHHHHHHHHHHH-HHHHHTTEECSCCSGGGEEEE
T ss_pred             ---------CCCHHHHHHHHHHHHHHH-HHHHHCCCccccCcccceEEe
Confidence                     589999999999999999 9999865    5568888763

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.34  E-value=4.9e-13  Score=105.65  Aligned_cols=82  Identities=17%  Similarity=0.277  Sum_probs=67.8

Q ss_pred             HHHHHHHHHhhhCC-CCCeeEEeceeeec-CCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          16 EILRLGVKQLEVYR-HPKILSVLHPIEEC-PDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSA   92 (138)
Q Consensus        16 e~lrrEi~~L~rLr-HPnIL~l~e~~ee~-~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (138)
                      +.+++|+.+|++|+ ||||+++++.++.. .+.+++||||+. ++|.++.+                             
T Consensus        74 ~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~-----------------------------  124 (328)
T d3bqca1          74 KKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ-----------------------------  124 (328)
T ss_dssp             HHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEEECCCSCBGGGTTT-----------------------------
T ss_pred             HHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEEeecCCCcHHHHhc-----------------------------
Confidence            56789999999996 99999999987643 357999999996 57654321                             


Q ss_pred             CCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          93 SRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        93 ~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                               .|+|.+++.++.||+.|| +|||+..    .+.|++|.+
T Consensus       125 ---------~l~e~~i~~i~~qil~aL-~~LH~~gIvHrDiKp~NILi  162 (328)
T d3bqca1         125 ---------TLTDYDIRFYMYEILKAL-DYCHSMGIMHRDVKPHNVMI  162 (328)
T ss_dssp             ---------SCCHHHHHHHHHHHHHHH-HHHHHTTEECCCCSGGGEEE
T ss_pred             ---------CCCHHHHHHHHHHHHHHH-HHHhhcccccccccccceEE
Confidence                     589999999999999999 9999854    556888865

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.33  E-value=1e-12  Score=103.13  Aligned_cols=96  Identities=15%  Similarity=0.114  Sum_probs=71.3

Q ss_pred             CCCCcchHHHHHHHHHHHHhhhCCCCCeeEEeceeeec-------CCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCC
Q psy3822           6 HKPKRKETVTEILRLGVKQLEVYRHPKILSVLHPIEEC-------PDALAFATEPVYASLASILAFQESPAPNHSTNPVT   78 (138)
Q Consensus         6 ~K~~~~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~-------~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~   78 (138)
                      .+....+...+.+.+|+.+|++|+||||+++++.+...       .+.+|+|||++.+.+........            
T Consensus        44 ~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~~~~~~~~~------------  111 (318)
T d3blha1          44 LMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL------------  111 (318)
T ss_dssp             ----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC----------CEEEEEECCCEEHHHHHTCTT------------
T ss_pred             ehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeecccccccccCceEEEEEeccCCCccchhhhcc------------
Confidence            33334445557788999999999999999999976432       34699999999877766554321            


Q ss_pred             CCCCCCCCCCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          79 GGSGSSPPPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                            ..+++.+++.++.||++|| +|||+..    .+.|++|.+
T Consensus       112 ----------------------~~~~~~~~~~i~~qil~~l-~~lH~~~ivHrDlKp~NILl  150 (318)
T d3blha1         112 ----------------------VKFTLSEIKRVMQMLLNGL-YYIHRNKILHRDMKAANVLI  150 (318)
T ss_dssp             ----------------------CCCCHHHHHHHHHHHHHHH-HHHHHTTEECCCCCGGGEEE
T ss_pred             ----------------------cccccHHHHHHHHHHHHHH-HHhccCCEEecCcCchheee
Confidence                                  2588999999999999999 9999854    556888754

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.27  E-value=5.4e-12  Score=98.54  Aligned_cols=105  Identities=12%  Similarity=0.055  Sum_probs=74.5

Q ss_pred             hHHHHHHHHHHHHhhhC-CCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          12 ETVTEILRLGVKQLEVY-RHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPAN   89 (138)
Q Consensus        12 e~~~e~lrrEi~~L~rL-rHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (138)
                      ....+.+.+|+..|.++ +||||++++....+..+.+++||||+. ++|.++|.........            ..    
T Consensus        57 ~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~------------~~----  120 (299)
T d1ywna1          57 HSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP------------YK----  120 (299)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCEEEEECCTTCBHHHHHHHTGGGBCC------------------
T ss_pred             cHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCCCeEEEEEEecCCCcHHHHHHhccccccc------------cc----
Confidence            44456777888888776 699999999987766678999999995 7999999865421000            00    


Q ss_pred             CCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          90 QSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        90 ~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                         ..+.......|++.++..++.||++|| +|||+..    .+.|++|.+
T Consensus       121 ---~~~~~~~~~~l~~~~~~~~~~qi~~gl-~ylH~~~ivHrDlKp~NILl  167 (299)
T d1ywna1         121 ---VAPEDLYKDFLTLEHLICYSFQVAKGM-EFLASRKCIHRDLAARNILL  167 (299)
T ss_dssp             ------------CBCHHHHHHHHHHHHHHH-HHHHHTTCCCSCCCGGGEEE
T ss_pred             ---cchhhhhcccCCHHHHHHHHHHHHHHH-HHHHhCCCcCCcCCccceeE
Confidence               000011123699999999999999999 9999754    456888764

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.26  E-value=1.8e-12  Score=100.92  Aligned_cols=87  Identities=16%  Similarity=0.095  Sum_probs=66.4

Q ss_pred             HHHHHHHHHhhhC---CCCCeeEEeceeeec----CCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          16 EILRLGVKQLEVY---RHPKILSVLHPIEEC----PDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPA   88 (138)
Q Consensus        16 e~lrrEi~~L~rL---rHPnIL~l~e~~ee~----~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (138)
                      ..+.+|+..|++|   +||||+++++.+...    ...++++||++.+++..++.....                     
T Consensus        52 ~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~---------------------  110 (305)
T d1blxa_          52 LSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPE---------------------  110 (305)
T ss_dssp             CTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEEEEEEECCSCBHHHHHHHSCT---------------------
T ss_pred             HHHHHHHHHHHHHhhcCCCCcceeeeeecccccccCceEEEEEEeccCCchhhhhhccC---------------------
Confidence            3456788877766   899999999987532    347999999998766555543321                     


Q ss_pred             CCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          89 NQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        89 ~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                  ..+++.+++.++.||+.|| +|||+..    .+.|++|.+
T Consensus       111 ------------~~~~~~~~~~~~~qi~~aL-~yLH~~~ivHrDiKp~NILi  149 (305)
T d1blxa_         111 ------------PGVPTETIKDMMFQLLRGL-DFLHSHRVVHRDLKPQNILV  149 (305)
T ss_dssp             ------------TCSCHHHHHHHHHHHHHHH-HHHHHTTCCCCCCCGGGEEE
T ss_pred             ------------CCCCHHHHHHHHHHHHHHH-HHHHhCCEEecCCCccEEEE
Confidence                        2689999999999999999 9999755    455888754

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.25  E-value=1.3e-11  Score=97.52  Aligned_cols=100  Identities=7%  Similarity=-0.020  Sum_probs=75.2

Q ss_pred             cchHHHHHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          10 RKETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPA   88 (138)
Q Consensus        10 ~~e~~~e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (138)
                      ..+.-.+.+.+|+++|++|+||||+++++.+. ..+.+++||||+. ++|.+++........                  
T Consensus        62 ~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~-~~~~~~lv~e~~~~g~l~~~~~~~~~~~~------------------  122 (308)
T d1p4oa_          62 ASMRERIEFLNEASVMKEFNCHHVVRLLGVVS-QGQPTLVIMELMTRGDLKSYLRSLRPAMA------------------  122 (308)
T ss_dssp             SCHHHHHHHHHHHHHGGGCCCTTBCCEEEEEC-SSSSCEEEEECCTTCBHHHHHHHHHHHHH------------------
T ss_pred             cChHHHHHHHHHHHHHHHcCCCCEeeeeeEEe-cCCceeEEEeecCCCCHHHHHHhcccccc------------------
Confidence            33445567899999999999999999999775 4678999999995 899999874321000                  


Q ss_pred             CCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          89 NQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        89 ~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                             ....-..+++.++..++.||++|| .|||+..    .+.|++|.+
T Consensus       123 -------~~~~~~~~~~~~~~~i~~~ia~gl-~~LH~~~ivHrDlk~~NiLl  166 (308)
T d1p4oa_         123 -------NNPVLAPPSLSKMIQMAGEIADGM-AYLNANKFVHRDLAARNCMV  166 (308)
T ss_dssp             -------HCTTCCCCCHHHHHHHHHHHHHHH-HHHHHTTCBCSCCSGGGEEE
T ss_pred             -------cccccCCCCHHHHHHHHHHHHHHH-HHHhhCCeeeceEcCCceee
Confidence                   000011478889999999999999 9999864    445777754

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.23  E-value=2.5e-11  Score=95.88  Aligned_cols=82  Identities=13%  Similarity=0.012  Sum_probs=66.8

Q ss_pred             HHHHHHHhhhCCCCCeeEEeceeeecC---CeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          18 LRLGVKQLEVYRHPKILSVLHPIEECP---DALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSAS   93 (138)
Q Consensus        18 lrrEi~~L~rLrHPnIL~l~e~~ee~~---~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (138)
                      ..+|+..+.+++|||||++++...+..   ..+|+||||+. ++|.++|.+.                            
T Consensus        44 ~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~----------------------------   95 (303)
T d1vjya_          44 REAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY----------------------------   95 (303)
T ss_dssp             HHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHHC----------------------------
T ss_pred             HHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEEEecccCCCHHHHHhcC----------------------------
Confidence            356888888999999999999876533   26999999995 7999999743                            


Q ss_pred             CCcccccCCccHHHHHHHHHHHHHHHHhhhcC------------CCCcccCccee
Q psy3822          94 RPTHAREYHFLDIEIKYGVAQVDSSEFTYLYV------------PSTYLPSSVAF  136 (138)
Q Consensus        94 ~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~------------~a~~~~~~~~~  136 (138)
                              .+++.+...+..|++.|| .|||+            +..+.|++|..
T Consensus        96 --------~l~~~~~~~~~~~ia~gl-~~lH~~~~~~~~~~~IvHrDlKp~NILl  141 (303)
T d1vjya_          96 --------TVTVEGMIKLALSTASGL-AHLHMEIVGTQGKPAIAHRDLKSKNILV  141 (303)
T ss_dssp             --------CBCHHHHHHHHHHHHHHH-HHHHCCBCSTTCBCEEECSCCCGGGEEE
T ss_pred             --------CCCHHHHHHHHHHHHHHH-HHHHHhhhhhccCCCeeccccCccceEE
Confidence                    477788889999999999 99997            34556887753

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.20  E-value=5.4e-12  Score=100.87  Aligned_cols=86  Identities=17%  Similarity=0.178  Sum_probs=73.1

Q ss_pred             HHHHHHHHHHHhhhCCC-CCeeEEeceeeecCCeEEEEecccc-ccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          14 VTEILRLGVKQLEVYRH-PKILSVLHPIEECPDALAFATEPVY-ASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQS   91 (138)
Q Consensus        14 ~~e~lrrEi~~L~rLrH-PnIL~l~e~~ee~~~~L~fVtE~V~-~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (138)
                      ..+.+.+|+.+|++|+| |||+++++.++ +++.++++|||+. ++|.+.+....                         
T Consensus        71 ~~~~~~~E~~il~~l~h~pnIv~~~~~~~-~~~~~~~v~e~~~~~~L~~~i~~~~-------------------------  124 (322)
T d1vzoa_          71 TTEHTRTERQVLEHIRQSPFLVTLHYAFQ-TETKLHLILDYINGGELFTHLSQRE-------------------------  124 (322)
T ss_dssp             SGGGCCCHHHHHHHHHTCTTBCCEEEEEE-ETTEEEEEECCCCSCBHHHHHHHHS-------------------------
T ss_pred             HHHHHHHHHHHHHhccCCCeEEEeeeeec-cCCceeeeeecccccHHHHHHHhcc-------------------------
Confidence            45678999999999987 89999999776 4779999999995 79999998543                         


Q ss_pred             CCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          92 ASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        92 ~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                                .+.|..++.++.||+.|| +|||+..    .+.|+++.+
T Consensus       125 ----------~~~e~~~~~~~~Qi~~al-~~lH~~~ivHrDiKp~Nill  162 (322)
T d1vzoa_         125 ----------RFTEHEVQIYVGEIVLAL-EHLHKLGIIYRDIKLENILL  162 (322)
T ss_dssp             ----------CCCHHHHHHHHHHHHHHH-HHHHHTTCCCCCCCGGGEEE
T ss_pred             ----------cccHHHHHHHHHHHHHHH-HHhhcCCEEeccCCccceee
Confidence                      477899999999999999 9999865    455888765

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.15  E-value=6.1e-11  Score=92.24  Aligned_cols=86  Identities=14%  Similarity=0.067  Sum_probs=70.9

Q ss_pred             HHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q psy3822          17 ILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASRPT   96 (138)
Q Consensus        17 ~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   96 (138)
                      .+.+|+.+|++++|||++..+.....+.+..++||||+.++|.+.+....                              
T Consensus        48 ~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~~~~~l~~~~~~~~------------------------------   97 (299)
T d1ckia_          48 QLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCS------------------------------   97 (299)
T ss_dssp             CHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEECCCCBHHHHHHHTT------------------------------
T ss_pred             HHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEEcCCchhhhhhhcc------------------------------
Confidence            46899999999998887766665666678999999999999988877543                              


Q ss_pred             ccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCcceee
Q psy3822          97 HAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAFC  137 (138)
Q Consensus        97 ~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~~  137 (138)
                          ..+++.++..++.||++|| +|||+..    .+.|++|.++
T Consensus        98 ----~~~~~~~~~~~~~qi~~~l-~~lH~~~iiHrDiKp~NIl~~  137 (299)
T d1ckia_          98 ----RKFSLKTVLLLADQMISRI-EYIHSKNFIHRDVKPDNFLMG  137 (299)
T ss_dssp             ----TCCCHHHHHHHHHHHHHHH-HHHHHTTEECSCCCGGGEEEC
T ss_pred             ----CCCcHHHHHHHHHHHHHHH-HHHHHCCeeeccCCHhhcccc
Confidence                2589999999999999999 9999854    5569988654

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.01  E-value=8.1e-10  Score=86.29  Aligned_cols=85  Identities=13%  Similarity=0.029  Sum_probs=71.7

Q ss_pred             HHHHHHHHHhhhCCC-CCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          16 EILRLGVKQLEVYRH-PKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASR   94 (138)
Q Consensus        16 e~lrrEi~~L~rLrH-PnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (138)
                      +.+++|+..|++|+| |||+.++...+ +....++|||++.++|.+++.....                           
T Consensus        45 ~~~~~e~~~~~~l~~~~~i~~~~~~~~-~~~~~~~vme~~~~~l~~~~~~~~~---------------------------   96 (293)
T d1csna_          45 PQLRDEYRTYKLLAGCTGIPNVYYFGQ-EGLHNVLVIDLLGPSLEDLLDLCGR---------------------------   96 (293)
T ss_dssp             CCHHHHHHHHHHTTTCTTCCCEEEEEE-ETTEEEEEEECCCCBHHHHHHHTTT---------------------------
T ss_pred             HHHHHHHHHHHHhcCCCCCCEEEEEee-cCCccEEEEEecCCCHHHHHHhhcc---------------------------
Confidence            346889999999976 89999999665 5779999999999999999875432                           


Q ss_pred             CcccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          95 PTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        95 ~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                             .+++.++..++.|++.|| +|||+..    .+.|++|.+
T Consensus        97 -------~~~~~~~~~i~~q~~~~l-~~lH~~giiHrDiKp~Nili  134 (293)
T d1csna_          97 -------KFSVKTVAMAAKQMLARV-QSIHEKSLVYRDIKPDNFLI  134 (293)
T ss_dssp             -------CCCHHHHHHHHHHHHHHH-HHHHTTTEECCCCCGGGEEE
T ss_pred             -------chhhHHHHHHHHHHHHHH-HHHHHCCceeccCCccceee
Confidence                   588899999999999999 9999865    456888875

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.25  E-value=8e-07  Score=69.37  Aligned_cols=90  Identities=18%  Similarity=0.123  Sum_probs=64.6

Q ss_pred             HHHHHHHHHHHHhhhCCC-----------CCeeEEeceeee-cCCeEEEEecccc--ccHHHHHhhcCCCCCCCCCCCCC
Q psy3822          13 TVTEILRLGVKQLEVYRH-----------PKILSVLHPIEE-CPDALAFATEPVY--ASLASILAFQESPAPNHSTNPVT   78 (138)
Q Consensus        13 ~~~e~lrrEi~~L~rLrH-----------PnIL~l~e~~ee-~~~~L~fVtE~V~--~sL~~~L~~~~~~~~~~~~~~~~   78 (138)
                      ...+.+.+|+++|++|+|           |||+++++.++. .....+++++++.  .+.........            
T Consensus        51 ~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------  118 (362)
T d1q8ya_          51 VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYE------------  118 (362)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTEEEEEEEECCCCEEHHHHHHHTT------------
T ss_pred             cchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeeccccceeeeeeeccccccccccccccc------------
Confidence            345778999999998864           789999886654 3356777777763  34444444322            


Q ss_pred             CCCCCCCCCCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhhhcCCCCc-----ccCccee
Q psy3822          79 GGSGSSPPPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLYVPSTY-----LPSSVAF  136 (138)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a~~-----~~~~~~~  136 (138)
                                           ...+++.+++.++.||++|| +|||+..+.     .|++|.+
T Consensus       119 ---------------------~~~~~~~~i~~i~~qil~al-~~lh~~~~IvHrDlKp~NIll  159 (362)
T d1q8ya_         119 ---------------------HRGIPLIYVKQISKQLLLGL-DYMHRRCGIIHTDIKPENVLM  159 (362)
T ss_dssp             ---------------------TSCCCHHHHHHHHHHHHHHH-HHHHHTTCEECSCCSGGGEEE
T ss_pred             ---------------------ccCCcHHHHHHHHHHHHHHH-HHHhhhcCcccccCChhHeee
Confidence                                 12688999999999999999 999985544     4777653

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.57  E-value=3.6e-05  Score=55.35  Aligned_cols=74  Identities=12%  Similarity=-0.041  Sum_probs=54.1

Q ss_pred             HHHHHHHHHhhhCCCCCeeEEeceeeecCCeEEEEeccccccHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3822          16 EILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHSTNPVTGGSGSSPPPANQSASRP   95 (138)
Q Consensus        16 e~lrrEi~~L~rLrHPnIL~l~e~~ee~~~~L~fVtE~V~~sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   95 (138)
                      ....+|...|.+++|++|...++ +.  .  -+++|||+.+...   .                                
T Consensus        59 ~~~~~e~~~l~~l~~~~v~~~~~-~~--~--~~lvme~~~~~~~---~--------------------------------   98 (191)
T d1zara2          59 RSARNEFRALQKLQGLAVPKVYA-WE--G--NAVLMELIDAKEL---Y--------------------------------   98 (191)
T ss_dssp             HHHHHHHHHHHHTTTSSSCCEEE-EE--T--TEEEEECCCCEEG---G--------------------------------
T ss_pred             HHHHHHHHHHHHccCCCcceEEE-ec--C--CEEEEEeeccccc---c--------------------------------
Confidence            44578999999999999998886 22  2  2799999975210   0                                


Q ss_pred             cccccCCccHHHHHHHHHHHHHHHHhhhcCCC----CcccCccee
Q psy3822          96 THAREYHFLDIEIKYGVAQVDSSEFTYLYVPS----TYLPSSVAF  136 (138)
Q Consensus        96 ~~~~~~~l~E~eik~gl~QI~~aL~~fLH~~a----~~~~~~~~~  136 (138)
                            .+++..++..+.||++|| +|||+..    .+.|+++.+
T Consensus        99 ------~l~~~~~~~i~~ql~~~l-~~lH~~giiHrDiKP~NILv  136 (191)
T d1zara2          99 ------RVRVENPDEVLDMILEEV-AKFYHRGIVHGDLSQYNVLV  136 (191)
T ss_dssp             ------GCCCSCHHHHHHHHHHHH-HHHHHTTEECSCCSTTSEEE
T ss_pred             ------chhhHHHHHHHHHHHHHH-HHHhhCCEEEccCChhheee
Confidence                  233445677899999999 9999853    555888754