Psyllid ID: psy3969

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80------
Protein Sequence
MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCGVFRY
Secondary Structure (PSIPRED)
ccccEEEEEcccccHHHHHHHHHHHHHHHHcccccEEEEEcccccHHHHHHHHHHcccccccccccccccccEEEEccEEEccccc
Secondary Structure Prediction (SSPRO)
ccccEEEEEcccccHHHHHHHHHHHHHHHHccccEEEEEEcccccHHHHHHHHHcccccccccccccccccccEEccccccccccc
Coil and Loop (DISEMBL)
mkkpykisntvrgvkgvkKRQQRVLMILDsknidytviditepgkenEKEFMqqnskatpsdstvksnplppqifneedycgvfry
Flexible Loop (DISEMBL)
mkkpykisntvrgvkgvkkrqqRVLMildsknidytviDITEPGKENEKEFMQQnskatpsdstvksnplppqifneedycgvFRY
Low Complexity Region (SEG)
MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCGVFRY
Disordered region (IsUnstruct)
***************GVKKRQQRVLMILDSKNIDYTVIDIT**************************************YCG****
Disordered Region (DISOPRED)
***PYKI*NTVRG****KKRQQRVLMILDSKNIDYTVIDITEPGKENEK********************LPPQIFNEEDYCGVFR*
Disordered Region (DISEMBL)
MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKE*********************NPLPPQIFNEEDYCGVFRY
Disordered Region (DISPRO)
*****KIS**VRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCGVFRY
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCGVFRY
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	86	2.2.26 [Sep-21-2011]
Q9NFP5	158	SH3 domain-binding glutam	no	N/A	0.837	0.455	0.602	6e-19
Q9WUZ7	214	SH3 domain-binding glutam	yes	N/A	0.813	0.327	0.394	2e-08
P55822	239	SH3 domain-binding glutam	yes	N/A	0.813	0.292	0.394	3e-08
A4IFC4	107	SH3 domain-binding glutam	no	N/A	0.767	0.616	0.385	8e-08
Q6GMK7	105	SH3 domain-binding glutam	yes	N/A	0.767	0.628	0.442	2e-07
Q3KPU0	106	SH3 domain-binding glutam	N/A	N/A	0.709	0.575	0.447	2e-07
Q8BG73	107	SH3 domain-binding glutam	no	N/A	0.802	0.644	0.369	2e-07
Q9UJC5	107	SH3 domain-binding glutam	no	N/A	0.767	0.616	0.385	2e-07
Q7T0M3	106	SH3 domain-binding glutam	N/A	N/A	0.709	0.575	0.447	4e-07
Q28FJ0	106	SH3 domain-binding glutam	yes	N/A	0.709	0.575	0.447	4e-07

>sp|Q9NFP5|SH3BG_DROME SH3 domain-binding glutamic acid-rich protein homolog OS=Drosophila melanogaster GN=Sh3beta PE=1 SV=2

 Score = 92.8 bits (229), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 47/78 (60%), Positives = 59/78 (75%), Gaps = 6/78 (7%)

Query: 11 VRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKS--- 67
          + G K VKKRQQRVLMILDSKNI Y  +DITEPGKE+EKE MQ  +K+T +  TV     
Sbjct: 10 MSGNKEVKKRQQRVLMILDSKNIKYDTVDITEPGKESEKELMQ--NKSTSNGGTVSDPEP 67

Query: 68 -NPLPPQIFNEEDYCGVF 84
           +PLPPQ+FN+++YCG +
Sbjct: 68 RHPLPPQLFNDDEYCGDY 85

Drosophila melanogaster (taxid: 7227)

>sp|Q9WUZ7|SH3BG_MOUSE SH3 domain-binding glutamic acid-rich protein OS=Mus musculus GN=Sh3bgr PE=2 SV=1

 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/76 (39%), Positives = 47/76 (61%), Gaps = 6/76 (7%)

Query: 10 TVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSN- 68
          T  G   ++K+QQ V+  L++  ID+  +DI   G E+ +++M++N    P +   ++  
Sbjct: 9  TSSGSIAIRKKQQEVVGFLEANKIDFKELDIA--GDEDNRKWMREN---VPGEKKPQNGI 63

Query: 69 PLPPQIFNEEDYCGVF 84
          PLPPQIFNEE YCG F
Sbjct: 64 PLPPQIFNEEQYCGDF 79

Mus musculus (taxid: 10090)

>sp|P55822|SH3BG_HUMAN SH3 domain-binding glutamic acid-rich protein OS=Homo sapiens GN=SH3BGR PE=1 SV=3

 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 30/76 (39%), Positives = 46/76 (60%), Gaps = 6/76 (7%)

Query: 10  TVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSN- 68
           T  G   ++K+QQ V+  L++  ID+  +DI   G E+ + +M++N    P +   ++  
Sbjct: 72  TSSGSIAIRKKQQEVVGFLEANKIDFKELDIA--GDEDNRRWMREN---VPGEKKPQNGI 126

Query: 69  PLPPQIFNEEDYCGVF 84
           PLPPQIFNEE YCG F
Sbjct: 127 PLPPQIFNEEQYCGDF 142

Homo sapiens (taxid: 9606)

>sp|A4IFC4|SH3L2_BOVIN SH3 domain-binding glutamic acid-rich-like protein 2 OS=Bos taurus GN=SH3BGRL2 PE=3 SV=1

 Score = 55.8 bits (133), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 27/70 (38%), Positives = 43/70 (61%), Gaps = 4/70 (5%)

Query: 13 GVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPP 72
          G   +KK+QQ V+  L++  I++  +DIT    E ++++M +N    P     + NPLPP
Sbjct: 12 GFVAIKKKQQDVVRFLEANKIEFEEVDIT--MSEEQRQWMYKN--IPPEKKPAQGNPLPP 67

Query: 73 QIFNEEDYCG 82
          QIFN++ YCG
Sbjct: 68 QIFNDDQYCG 77

Bos taurus (taxid: 9913)

>sp|Q6GMK7|SH3L2_DANRE SH3 domain-binding glutamic acid-rich-like protein 2 OS=Danio rerio GN=sh3bgrl2 PE=3 SV=1

 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/70 (44%), Positives = 41/70 (58%), Gaps = 4/70 (5%)

Query: 13 GVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPP 72
          G   VKKRQQ ++  L++  I +  +DIT    E+++ +M Q  K        K NPLPP
Sbjct: 12 GSVAVKKRQQAIVGFLEANRISFEEVDIT--MLEDQRLWMYQ--KIPDEKRPEKGNPLPP 67

Query: 73 QIFNEEDYCG 82
          QIFN EDYCG
Sbjct: 68 QIFNGEDYCG 77

Danio rerio (taxid: 7955)

>sp|Q3KPU0|SH3LB_XENLA SH3 domain-binding glutamic acid-rich-like protein 2-B OS=Xenopus laevis GN=sh3bgrl2-b PE=3 SV=1

 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/67 (44%), Positives = 41/67 (61%), Gaps = 6/67 (8%)

Query: 17 VKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDST-VKSNPLPPQIF 75
          +KKRQQ VL  L++  I+Y  +DIT    E ++++M +N    P D    + NPLPPQIF
Sbjct: 16 IKKRQQEVLQFLEANRIEYEEVDIT--MLEEKRQWMYKN---IPKDRLPAQGNPLPPQIF 70

Query: 76 NEEDYCG 82
          N   YCG
Sbjct: 71 NNNIYCG 77

Xenopus laevis (taxid: 8355)

>sp|Q8BG73|SH3L2_MOUSE SH3 domain-binding glutamic acid-rich-like protein 2 OS=Mus musculus GN=Sh3bgrl2 PE=1 SV=1

 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 4/73 (5%)

Query: 10 TVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNP 69
          +  G   +KK+QQ V+  L++  I++  +DIT    E ++++M +N    P     + NP
Sbjct: 9  SCSGFVAIKKKQQDVVRFLEANKIEFEEVDITM--SEEQRQWMYKN--IPPEKKPAQGNP 64

Query: 70 LPPQIFNEEDYCG 82
          LPPQIFN + YCG
Sbjct: 65 LPPQIFNGDRYCG 77

Mus musculus (taxid: 10090)

>sp|Q9UJC5|SH3L2_HUMAN SH3 domain-binding glutamic acid-rich-like protein 2 OS=Homo sapiens GN=SH3BGRL2 PE=1 SV=2

 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/70 (38%), Positives = 42/70 (60%), Gaps = 4/70 (5%)

Query: 13 GVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPP 72
          G   +KK+QQ V+  L++  I++  +DIT    E ++++M +N    P     + NPLPP
Sbjct: 12 GFVAIKKKQQDVVRFLEANKIEFEEVDIT--MSEEQRQWMYKN--VPPEKKPTQGNPLPP 67

Query: 73 QIFNEEDYCG 82
          QIFN + YCG
Sbjct: 68 QIFNGDRYCG 77

Homo sapiens (taxid: 9606)

>sp|Q7T0M3|SH3LA_XENLA SH3 domain-binding glutamic acid-rich-like protein 2-A OS=Xenopus laevis GN=sh3bgrl2-a PE=3 SV=1

 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 30/67 (44%), Positives = 41/67 (61%), Gaps = 6/67 (8%)

Query: 17 VKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDST-VKSNPLPPQIF 75
          +KKRQQ VL  L++  I+Y  +DIT    E  +++M +N    P D    + NPLPPQIF
Sbjct: 16 IKKRQQEVLQFLEANRIEYEEVDIT--MLEEMRQWMYKN---IPKDRLPGQGNPLPPQIF 70

Query: 76 NEEDYCG 82
          N+  YCG
Sbjct: 71 NDNAYCG 77

Xenopus laevis (taxid: 8355)

>sp|Q28FJ0|SH3L2_XENTR SH3 domain-binding glutamic acid-rich-like protein 2 OS=Xenopus tropicalis GN=sh3bgrl2 PE=3 SV=1

 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 30/67 (44%), Positives = 42/67 (62%), Gaps = 6/67 (8%)

Query: 17 VKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDST-VKSNPLPPQIF 75
          +KKRQQ VL  L++  I+Y  +DIT    E ++++M +N    P D    + NPLPPQIF
Sbjct: 16 IKKRQQEVLQFLEANRIEYEEVDIT--MLEEKRQWMYKN---IPKDRLPEQGNPLPPQIF 70

Query: 76 NEEDYCG 82
          N+  YCG
Sbjct: 71 NDNIYCG 77

Xenopus tropicalis (taxid: 8364)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	86
328778804	192	PREDICTED: SH3 domain-binding glutamic a	0.813	0.364	0.68	5e-20
380030088	192	PREDICTED: LOW QUALITY PROTEIN: SH3 doma	0.813	0.364	0.68	6e-20
322785851	187	hypothetical protein SINV_09128 [Solenop	0.790	0.363	0.649	1e-19
307189893	194	SH3 domain-binding glutamic acid-rich pr	0.790	0.350	0.636	1e-19
383865227	189	PREDICTED: SH3 domain-binding glutamic a	0.813	0.370	0.666	1e-19
195125631	154	GI12464 [Drosophila mojavensis] gi|19391	0.837	0.467	0.666	2e-19
357617197	248	hypothetical protein KGM_15044 [Danaus p	0.848	0.294	0.636	2e-19
307204328	183	SH3 domain-binding glutamic acid-rich pr	0.720	0.338	0.690	3e-19
195441050	453	GK25310 [Drosophila willistoni] gi|19416	0.837	0.158	0.628	5e-19
195492539	473	GE20417 [Drosophila yakuba] gi|194180136	0.837	0.152	0.615	8e-19

>gi|328778804|ref|XP_624305.2| PREDICTED: SH3 domain-binding glutamic acid-rich protein homolog [Apis mellifera]

 Score =  101 bits (252), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 51/75 (68%), Positives = 56/75 (74%), Gaps = 5/75 (6%)

Query: 11 VRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPL 70
          + G K VKKRQQRVLMILDSKN++Y  IDITEPGKE EKEFMQ NS A  S       PL
Sbjct: 10 ISGNKEVKKRQQRVLMILDSKNVEYETIDITEPGKEMEKEFMQANSIARES-----KYPL 64

Query: 71 PPQIFNEEDYCGVFR 85
          PPQIFNEE+YCG + 
Sbjct: 65 PPQIFNEEEYCGDYE 79

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380030088|ref|XP_003698690.1| PREDICTED: LOW QUALITY PROTEIN: SH3 domain-binding glutamic acid-rich protein homolog [Apis florea]

 Score =  101 bits (251), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 51/75 (68%), Positives = 56/75 (74%), Gaps = 5/75 (6%)

Query: 11 VRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPL 70
          + G K VKKRQQRVLMILDSKN++Y  IDITEPGKE EKEFMQ NS A  S       PL
Sbjct: 10 ISGNKEVKKRQQRVLMILDSKNVEYETIDITEPGKEMEKEFMQANSIARES-----KYPL 64

Query: 71 PPQIFNEEDYCGVFR 85
          PPQIFNEE+YCG + 
Sbjct: 65 PPQIFNEEEYCGDYE 79

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322785851|gb|EFZ12470.1| hypothetical protein SINV_09128 [Solenopsis invicta]

 Score =  100 bits (249), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 50/77 (64%), Positives = 59/77 (76%), Gaps = 9/77 (11%)

Query: 11 VRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSN-- 68
          + G K VKKRQQRV+MILDSKN++Y VIDITEPGKE EKEFMQ NS A       ++N  
Sbjct: 10 ISGNKEVKKRQQRVMMILDSKNVEYEVIDITEPGKELEKEFMQANSNA-------RNNKY 62

Query: 69 PLPPQIFNEEDYCGVFR 85
          PLPPQ+FNE+DYCG + 
Sbjct: 63 PLPPQLFNEDDYCGDYE 79

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307189893|gb|EFN74137.1| SH3 domain-binding glutamic acid-rich protein-like protein [Camponotus floridanus]

 Score =  100 bits (248), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 49/77 (63%), Positives = 59/77 (76%), Gaps = 9/77 (11%)

Query: 11 VRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSN-- 68
          + G K VKKRQQRV+MILDSKN++Y +IDITEPGKE +KEFMQ NS A       ++N  
Sbjct: 10 ISGNKEVKKRQQRVMMILDSKNVEYEIIDITEPGKELDKEFMQANSNA-------RTNKY 62

Query: 69 PLPPQIFNEEDYCGVFR 85
          PLPPQIFNE+DYCG + 
Sbjct: 63 PLPPQIFNEDDYCGDYE 79

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383865227|ref|XP_003708076.1| PREDICTED: SH3 domain-binding glutamic acid-rich protein homolog [Megachile rotundata]

 Score =  100 bits (248), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 50/75 (66%), Positives = 57/75 (76%), Gaps = 5/75 (6%)

Query: 11 VRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPL 70
          + G K VKKRQQRVLMILDSKN++Y +IDITEPGKE EKEFMQ NS A  S       PL
Sbjct: 10 ISGNKEVKKRQQRVLMILDSKNVEYEIIDITEPGKELEKEFMQSNSIARES-----KYPL 64

Query: 71 PPQIFNEEDYCGVFR 85
          PPQIFNE++YCG + 
Sbjct: 65 PPQIFNEDEYCGDYE 79

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195125631|ref|XP_002007281.1| GI12464 [Drosophila mojavensis] gi|193918890|gb|EDW17757.1| GI12464 [Drosophila mojavensis]

 Score = 99.4 bits (246), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 52/78 (66%), Positives = 60/78 (76%), Gaps = 6/78 (7%)

Query: 11 VRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKS--- 67
          + G K VKKRQQRVLMILDSKNI Y  IDITEPGKE+EKEFMQ  +K+T S  TV     
Sbjct: 10 MSGNKEVKKRQQRVLMILDSKNIQYDTIDITEPGKESEKEFMQ--NKSTSSGGTVSDPEP 67

Query: 68 -NPLPPQIFNEEDYCGVF 84
           +PLPPQIFN+E+YCG +
Sbjct: 68 RHPLPPQIFNDEEYCGDY 85

Source: Drosophila mojavensis

Species: Drosophila mojavensis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357617197|gb|EHJ70645.1| hypothetical protein KGM_15044 [Danaus plexippus]

 Score = 99.4 bits (246), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 49/77 (63%), Positives = 62/77 (80%), Gaps = 4/77 (5%)

Query: 11 VRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKA---TPSDSTVKS 67
          + G K VKKRQQRVLMILDSKNI Y +IDITEPG+E++K+FMQ NSK+   T SD   +S
Sbjct: 10 ISGNKEVKKRQQRVLMILDSKNIKYEIIDITEPGREDDKDFMQNNSKSNGGTVSDPNPRS 69

Query: 68 NPLPPQIFNEEDYCGVF 84
           PLPPQ+FN+++YCG +
Sbjct: 70 -PLPPQLFNDDEYCGDY 85

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307204328|gb|EFN83083.1| SH3 domain-binding glutamic acid-rich protein-like protein [Harpegnathos saltator]

 Score = 99.0 bits (245), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 49/71 (69%), Positives = 56/71 (78%), Gaps = 9/71 (12%)

Query: 17 VKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSN--PLPPQI 74
          VKKRQQRVLMILDSKN++Y +IDITEPGKE EKEFMQ NS A       ++N  PLPPQI
Sbjct: 4  VKKRQQRVLMILDSKNVEYEIIDITEPGKELEKEFMQTNSNA-------RTNKYPLPPQI 56

Query: 75 FNEEDYCGVFR 85
          FNE+DYCG + 
Sbjct: 57 FNEDDYCGDYE 67

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195441050|ref|XP_002068344.1| GK25310 [Drosophila willistoni] gi|194164429|gb|EDW79330.1| GK25310 [Drosophila willistoni]

 Score = 98.2 bits (243), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 49/78 (62%), Positives = 58/78 (74%), Gaps = 6/78 (7%)

Query: 11 VRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKS--- 67
          + G K VKKRQQRVLMILDSKNI Y  +DITEPGKE EKE MQ  +K+T +  TV     
Sbjct: 10 MSGNKEVKKRQQRVLMILDSKNIQYDTVDITEPGKEGEKELMQ--NKSTSNGGTVSDPEP 67

Query: 68 -NPLPPQIFNEEDYCGVF 84
           +PLPPQIFN+E+YCG +
Sbjct: 68 RHPLPPQIFNDEEYCGDY 85

Source: Drosophila willistoni

Species: Drosophila willistoni

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195492539|ref|XP_002094035.1| GE20417 [Drosophila yakuba] gi|194180136|gb|EDW93747.1| GE20417 [Drosophila yakuba]

 Score = 97.8 bits (242), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 48/78 (61%), Positives = 59/78 (75%), Gaps = 6/78 (7%)

Query: 11 VRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKS--- 67
          + G K VKKRQQRVLMILDSKNI Y  +DITEPGKE+EKE MQ  +K+T +  TV     
Sbjct: 10 MSGNKEVKKRQQRVLMILDSKNIKYDTVDITEPGKESEKELMQ--NKSTSNGGTVSDPEP 67

Query: 68 -NPLPPQIFNEEDYCGVF 84
           +PLPPQ+FN+E+YCG +
Sbjct: 68 RHPLPPQLFNDEEYCGDY 85

Source: Drosophila yakuba

Species: Drosophila yakuba

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	86
FB|FBgn0035772	158	Sh3beta "Sh3beta" [Drosophila	0.790	0.430	0.635	3.1e-19
UNIPROTKB|E1BZG8	135	SH3BGR "Uncharacterized protei	0.813	0.518	0.407	5.2e-10
UNIPROTKB|A4IFC4	107	SH3BGRL2 "SH3 domain-binding g	0.767	0.616	0.385	6.6e-10
MGI|MGI:1354740	214	Sh3bgr "SH3-binding domain glu	0.813	0.327	0.394	8.4e-10
RGD|1563599	213	Sh3bgr "SH3 domain binding glu	0.813	0.328	0.394	8.4e-10
UNIPROTKB|E1BVU4	78	SH3BGR "Uncharacterized protei	0.790	0.871	0.405	1.1e-09
UNIPROTKB|F1MR08	107	F1MR08 "SH3 domain-binding glu	0.720	0.579	0.393	1.4e-09
UNIPROTKB|F1MRQ7	208	SH3BGR "Uncharacterized protei	0.813	0.336	0.394	1.4e-09
UNIPROTKB|P55822	239	SH3BGR "SH3 domain-binding glu	0.813	0.292	0.394	1.6e-09
UNIPROTKB|I3LEV7	205	SH3BGR "Uncharacterized protei	0.813	0.341	0.394	1.8e-09

FB|FBgn0035772 Sh3beta "Sh3beta" [Drosophila melanogaster (taxid:7227)]

 Score = 230 (86.0 bits), Expect = 3.1e-19, P = 3.1e-19
 Identities = 47/74 (63%), Positives = 57/74 (77%)

Query:    13 GVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKS----N 68
             G K VKKRQQRVLMILDSKNI Y  +DITEPGKE+EKE MQ  +K+T +  TV      +
Sbjct:    12 GNKEVKKRQQRVLMILDSKNIKYDTVDITEPGKESEKELMQ--NKSTSNGGTVSDPEPRH 69

Query:    69 PLPPQIFNEEDYCG 82
             PLPPQ+FN+++YCG
Sbjct:    70 PLPPQLFNDDEYCG 83

GO:0005575 "cellular_component" evidence=ND

UNIPROTKB|E1BZG8 SH3BGR "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 143 (55.4 bits), Expect = 5.2e-10, P = 5.2e-10
 Identities = 31/76 (40%), Positives = 47/76 (61%)

Query:    10 TVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSN- 68
             T  G   +KK+QQ V+  L++  ID+  +DI   G E+ +++M++N    P +   ++  
Sbjct:     9 TSSGSTAIKKKQQEVVGFLEANKIDFQQMDIA--GDEDNRKWMREN---VPGEKKPQNGI 63

Query:    69 PLPPQIFNEEDYCGVF 84
             PLPPQIFNEE YCG F
Sbjct:    64 PLPPQIFNEERYCGDF 79

GO:0005829 "cytosol" evidence=IEA

UNIPROTKB|A4IFC4 SH3BGRL2 "SH3 domain-binding glutamic acid-rich-like protein 2" [Bos taurus (taxid:9913)]

 Score = 142 (55.0 bits), Expect = 6.6e-10, P = 6.6e-10
 Identities = 27/70 (38%), Positives = 43/70 (61%)

Query:    13 GVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPP 72
             G   +KK+QQ V+  L++  I++  +DIT    E ++++M +N    P     + NPLPP
Sbjct:    12 GFVAIKKKQQDVVRFLEANKIEFEEVDITM--SEEQRQWMYKN--IPPEKKPAQGNPLPP 67

Query:    73 QIFNEEDYCG 82
             QIFN++ YCG
Sbjct:    68 QIFNDDQYCG 77

GO:0005634 "nucleus" evidence=IEA

GO:0017124 "SH3 domain binding" evidence=IEA

MGI|MGI:1354740 Sh3bgr "SH3-binding domain glutamic acid-rich protein" [Mus musculus (taxid:10090)]

 Score = 141 (54.7 bits), Expect = 8.4e-10, P = 8.4e-10
 Identities = 30/76 (39%), Positives = 47/76 (61%)

Query:    10 TVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSN- 68
             T  G   ++K+QQ V+  L++  ID+  +DI   G E+ +++M++N    P +   ++  
Sbjct:     9 TSSGSIAIRKKQQEVVGFLEANKIDFKELDIA--GDEDNRKWMREN---VPGEKKPQNGI 63

Query:    69 PLPPQIFNEEDYCGVF 84
             PLPPQIFNEE YCG F
Sbjct:    64 PLPPQIFNEEQYCGDF 79

GO:0003674 "molecular_function" evidence=ND

GO:0005829 "cytosol" evidence=ISO

GO:0008150 "biological_process" evidence=ND

GO:0017124 "SH3 domain binding" evidence=IEA

RGD|1563599 Sh3bgr "SH3 domain binding glutamic acid-rich protein" [Rattus norvegicus (taxid:10116)]

 Score = 141 (54.7 bits), Expect = 8.4e-10, P = 8.4e-10
 Identities = 30/76 (39%), Positives = 47/76 (61%)

Query:    10 TVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSN- 68
             T  G   ++K+QQ V+  L++  ID+  +DI   G E+ +++M++N    P +   ++  
Sbjct:     9 TSSGSIAIRKKQQEVVGFLEANKIDFKELDIA--GDEDNRKWMREN---VPGEKKPQNGI 63

Query:    69 PLPPQIFNEEDYCGVF 84
             PLPPQIFNEE YCG F
Sbjct:    64 PLPPQIFNEEQYCGDF 79

GO:0005829 "cytosol" evidence=ISO

UNIPROTKB|E1BVU4 SH3BGR "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 140 (54.3 bits), Expect = 1.1e-09, P = 1.1e-09
 Identities = 30/74 (40%), Positives = 46/74 (62%)

Query:    10 TVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSN- 68
             T  G   +KK+QQ V+  L++  ID+  +DI   G E+ +++M++N    P +   ++  
Sbjct:     9 TSSGSTAIKKKQQEVVGFLEANKIDFQQMDIA--GDEDNRKWMREN---VPGEKKPQNGI 63

Query:    69 PLPPQIFNEEDYCG 82
             PLPPQIFNEE YCG
Sbjct:    64 PLPPQIFNEERYCG 77

GO:0005829 "cytosol" evidence=IEA

UNIPROTKB|F1MR08 F1MR08 "SH3 domain-binding glutamic acid-rich-like protein" [Bos taurus (taxid:9913)]

 Score = 139 (54.0 bits), Expect = 1.4e-09, P = 1.4e-09
 Identities = 26/66 (39%), Positives = 42/66 (63%)

Query:    17 VKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFN 76
             +KK+QQ V+  L++  I++  +DIT    E ++++M +N    P     + NPLPPQIFN
Sbjct:    16 IKKKQQDVVRFLEANKIEFEEVDITM--SEEQRQWMYKN--IPPEKKPAQGNPLPPQIFN 71

Query:    77 EEDYCG 82
             ++ YCG
Sbjct:    72 DDQYCG 77

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|F1MRQ7 SH3BGR "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 139 (54.0 bits), Expect = 1.4e-09, P = 1.4e-09
 Identities = 30/76 (39%), Positives = 46/76 (60%)

Query:    10 TVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSN- 68
             T  G   ++K+QQ V+  L++  ID+   DI   G E+ +++M++N    P +   ++  
Sbjct:     9 TSSGSIAIRKKQQEVVGFLEANKIDFKEFDIA--GDEDNRKWMREN---VPGEKKPQNGI 63

Query:    69 PLPPQIFNEEDYCGVF 84
             PLPPQIFNEE YCG F
Sbjct:    64 PLPPQIFNEEQYCGDF 79

GO:0005829 "cytosol" evidence=IEA

UNIPROTKB|P55822 SH3BGR "SH3 domain-binding glutamic acid-rich protein" [Homo sapiens (taxid:9606)]

 Score = 140 (54.3 bits), Expect = 1.6e-09, P = 1.6e-09
 Identities = 30/76 (39%), Positives = 46/76 (60%)

Query:    10 TVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSN- 68
             T  G   ++K+QQ V+  L++  ID+  +DI   G E+ + +M++N    P +   ++  
Sbjct:    72 TSSGSIAIRKKQQEVVGFLEANKIDFKELDIA--GDEDNRRWMREN---VPGEKKPQNGI 126

Query:    69 PLPPQIFNEEDYCGVF 84
             PLPPQIFNEE YCG F
Sbjct:   127 PLPPQIFNEEQYCGDF 142

GO:0017124 "SH3 domain binding" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

GO:0005070 "SH3/SH2 adaptor activity" evidence=TAS

GO:0006461 "protein complex assembly" evidence=TAS

UNIPROTKB|I3LEV7 SH3BGR "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 138 (53.6 bits), Expect = 1.8e-09, P = 1.8e-09
 Identities = 30/76 (39%), Positives = 45/76 (59%)

Query:    10 TVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSN- 68
             T  G   ++K+QQ V+  L++  ID+   DI   G E+ + +M++N    P +   ++  
Sbjct:     9 TSSGSIAIRKKQQEVVGFLEANKIDFKEFDIA--GDEDNRRWMREN---VPGEKKPQNGI 63

Query:    69 PLPPQIFNEEDYCGVF 84
             PLPPQIFNEE YCG F
Sbjct:    64 PLPPQIFNEEQYCGDF 79

GO:0005829 "cytosol" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q6GMK7	SH3L2_DANRE	No assigned EC number	0.4428	0.7674	0.6285	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	86
cd03030	92	cd03030, GRX_SH3BGR, Glutaredoxin (GRX) family, SH	3e-21
pfam04908	92	pfam04908, SH3BGR, SH3-binding, glutamic acid-rich	6e-20
cd02066	72	cd02066, GRX_family, Glutaredoxin (GRX) family; co	1e-10

>gnl|CDD|239328 cd03030, GRX_SH3BGR, Glutaredoxin (GRX) family, SH3BGR (SH3 domain binding glutamic acid-rich protein) subfamily; a recently-identified subfamily composed of SH3BGR and similar proteins possessing significant sequence similarity to GRX, but without a redox active CXXC motif

 Score = 79.2 bits (196), Expect = 3e-21
 Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 8/73 (10%)

Query: 10 TVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNP 69
          +  G   +KKRQQ VL  L++K I++  +DI+    E  +++M++N             P
Sbjct: 8  SSSGSTEIKKRQQEVLGFLEAKKIEFEEVDISM--NEENRQWMRENVPNE------NGKP 59

Query: 70 LPPQIFNEEDYCG 82
          LPPQIFN ++YCG
Sbjct: 60 LPPQIFNGDEYCG 72

The SH3BGR gene was cloned in an effort to identify genes mapping to chromosome 21, which could be involved in the pathogenesis of congenital heart disease affecting Down syndrome newborns. Several human SH3BGR-like (SH3BGRL) genes have been identified since, mapping to different locations in the chromosome. Of these, SH3BGRL3 was identified as a tumor necrosis factor (TNF) alpha inhibitory protein and was also named TIP-B1. Upregulation of expression of SH3BGRL3 is associated with differentiation. It has been suggested that it functions as a regulator of differentiation-related signal transduction pathways. Length = 92

>gnl|CDD|218321 pfam04908, SH3BGR, SH3-binding, glutamic acid-rich protein

 Score = 76.0 bits (187), Expect = 6e-20
 Identities = 31/73 (42%), Positives = 44/73 (60%), Gaps = 10/73 (13%)

Query: 10 TVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNP 69
          +  G   +KK+QQRVLMILD+  I +  +DIT+   E ++ +M++N             P
Sbjct: 9  SSSGSPEIKKKQQRVLMILDANKIPFDEVDITK--DEEQRRWMRENPP--------NGAP 58

Query: 70 LPPQIFNEEDYCG 82
          LPPQIFNE+ YCG
Sbjct: 59 LPPQIFNEDQYCG 71

Length = 92

>gnl|CDD|239017 cd02066, GRX_family, Glutaredoxin (GRX) family; composed of GRX, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain

 Score = 51.7 bits (125), Expect = 1e-10
 Identities = 17/69 (24%), Positives = 28/69 (40%), Gaps = 12/69 (17%)

Query: 14 VKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQ 73
           K      +R   +L+S  I++  IDI E      +E +++ S            P  PQ
Sbjct: 6  SKSTCPYCKRAKRLLESLGIEFEEIDILED--GELREELKELSGW----------PTVPQ 53

Query: 74 IFNEEDYCG 82
          IF   ++ G
Sbjct: 54 IFINGEFIG 62

GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH -> GSH reductase -> GSH -> GRX -> protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known including human GRX1 and GRX2, as well as E. coli GRX1 and GRX3, which are members of this family. E. coli GRX2, however, is a 24-kDa protein that belongs to the GSH S-transferase (GST) family. Length = 72

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	86
cd03030	92	GRX_SH3BGR Glutaredoxin (GRX) family, SH3BGR (SH3	99.98
PF04908	99	SH3BGR: SH3-binding, glutamic acid-rich protein; I	99.97
KOG4023|consensus	108		99.9
cd03031	147	GRX_GRX_like Glutaredoxin (GRX) family, GRX-like d	99.84
PRK10824	115	glutaredoxin-4; Provisional	99.8
TIGR00365	97	monothiol glutaredoxin, Grx4 family. The gene for	99.78
cd03027	73	GRX_DEP Glutaredoxin (GRX) family, Dishevelled, Eg	99.78
PHA03050	108	glutaredoxin; Provisional	99.77
PRK10638	83	glutaredoxin 3; Provisional	99.77
cd03418	75	GRX_GRXb_1_3_like Glutaredoxin (GRX) family, GRX b	99.76
COG0695	80	GrxC Glutaredoxin and related proteins [Posttransl	99.75
TIGR02189	99	GlrX-like_plant Glutaredoxin-like family. This fam	99.75
cd03028	90	GRX_PICOT_like Glutaredoxin (GRX) family, PKC-inte	99.75
TIGR02181	79	GRX_bact Glutaredoxin, GrxC family. This family of	99.73
PRK11200	85	grxA glutaredoxin 1; Provisional	99.72
cd03029	72	GRX_hybridPRX5 Glutaredoxin (GRX) family, PRX5 hyb	99.71
TIGR02190	79	GlrX-dom Glutaredoxin-family domain. This C-termin	99.68
TIGR02183	86	GRXA Glutaredoxin, GrxA family. This model include	99.66
cd02066	72	GRX_family Glutaredoxin (GRX) family; composed of	99.64
PRK12759	410	bifunctional gluaredoxin/ribonucleoside-diphosphat	99.63
PF00462	60	Glutaredoxin: Glutaredoxin; InterPro: IPR002109 Gl	99.63
PTZ00062	204	glutaredoxin; Provisional	99.63
PRK10329	81	glutaredoxin-like protein; Provisional	99.54
TIGR02194	72	GlrX_NrdH Glutaredoxin-like protein NrdH. NrdH-red	99.53
cd03419	82	GRX_GRXh_1_2_like Glutaredoxin (GRX) family, GRX h	99.52
TIGR02180	84	GRX_euk Glutaredoxin. This model represents eukary	99.49
KOG1752|consensus	104		99.39
TIGR02196	74	GlrX_YruB Glutaredoxin-like protein, YruB-family.	99.27
KOG2824|consensus	281		99.21
cd02976	73	NrdH NrdH-redoxin (NrdH) family; NrdH is a small m	99.2
COG0278	105	Glutaredoxin-related protein [Posttranslational mo	99.19
KOG0911|consensus	227		99.03
TIGR02200	77	GlrX_actino Glutaredoxin-like protein. This family	99.01
cd02973	67	TRX_GRX_like Thioredoxin (TRX)-Glutaredoxin (GRX)-	98.83
cd00570	71	GST_N_family Glutathione S-transferase (GST) famil	98.45
cd03041	77	GST_N_2GST_N GST_N family, 2 repeats of the N-term	98.39
cd03040	77	GST_N_mPGES2 GST_N family; microsomal Prostaglandi	98.38
cd03037	71	GST_N_GRX2 GST_N family, Glutaredoxin 2 (GRX2) sub	98.29
cd02977	105	ArsC_family Arsenate Reductase (ArsC) family; comp	98.27
PRK01655	131	spxA transcriptional regulator Spx; Reviewed	98.2
cd03036	111	ArsC_like Arsenate Reductase (ArsC) family, unknow	98.16
cd03060	71	GST_N_Omega_like GST_N family, Omega-like subfamil	98.14
cd03032	115	ArsC_Spx Arsenate Reductase (ArsC) family, Spx sub	98.07
TIGR01617	117	arsC_related transcriptional regulator, Spx/MgsR f	98.05
cd03051	74	GST_N_GTT2_like GST_N family, Saccharomyces cerevi	97.95
cd03055	89	GST_N_Omega GST_N family, Class Omega subfamily; G	97.9
PRK13344	132	spxA transcriptional regulator Spx; Reviewed	97.87
PRK12559	131	transcriptional regulator Spx; Provisional	97.83
cd03056	73	GST_N_4 GST_N family, unknown subfamily 4; compose	97.82
cd03035	105	ArsC_Yffb Arsenate Reductase (ArsC) family, Yffb s	97.76
cd03059	73	GST_N_SspA GST_N family, Stringent starvation prot	97.74
PRK10026	141	arsenate reductase; Provisional	97.7
cd03045	74	GST_N_Delta_Epsilon GST_N family, Class Delta and	97.68
COG4545	85	Glutaredoxin-related protein [Posttranslational mo	97.61
cd03033	113	ArsC_15kD Arsenate Reductase (ArsC) family, 15kD p	97.57
COG1393	117	ArsC Arsenate reductase and related proteins, glut	97.56
cd03034	112	ArsC_ArsC Arsenate Reductase (ArsC) family, ArsC s	97.53
TIGR00411	82	redox_disulf_1 small redox-active disulfide protei	97.49
cd03042	73	GST_N_Zeta GST_N family, Class Zeta subfamily; GST	97.45
TIGR00014	114	arsC arsenate reductase (glutaredoxin). composed o	97.45
PF13417	75	GST_N_3: Glutathione S-transferase, N-terminal dom	97.43
PRK10853	118	putative reductase; Provisional	97.27
cd03054	72	GST_N_Metaxin GST_N family, Metaxin subfamily; com	97.21
cd03052	73	GST_N_GDAP1 GST_N family, Ganglioside-induced diff	97.2
TIGR02182	209	GRXB Glutaredoxin, GrxB family. This model include	97.04
cd03053	76	GST_N_Phi GST_N family, Class Phi subfamily; compo	96.99
PRK10387	210	glutaredoxin 2; Provisional	96.98
cd03039	72	GST_N_Sigma_like GST_N family, Class Sigma_like; c	96.96
TIGR01616	126	nitro_assoc nitrogenase-associated protein. This m	96.96
cd03076	73	GST_N_Pi GST_N family, Class Pi subfamily; GSTs ar	96.89
PF03960	110	ArsC: ArsC family; InterPro: IPR006660 Several bac	96.88
PF05768	81	DUF836: Glutaredoxin-like domain (DUF836); InterPr	96.8
cd03049	73	GST_N_3 GST_N family, unknown subfamily 3; compose	96.67
cd03050	76	GST_N_Theta GST_N family, Class Theta subfamily; c	96.67
cd01659	69	TRX_superfamily Thioredoxin (TRX) superfamily; a l	96.67
cd03077	79	GST_N_Alpha GST_N family, Class Alpha subfamily; G	96.66
cd03026	89	AhpF_NTD_C TRX-GRX-like family, Alkyl hydroperoxid	96.52
cd03048	81	GST_N_Ure2p_like GST_N family, Ure2p-like subfamil	96.5
PF13192	76	Thioredoxin_3: Thioredoxin domain; PDB: 1ZYP_B 1ZY	96.34
cd03047	73	GST_N_2 GST_N family, unknown subfamily 2; compose	96.29
cd03061	91	GST_N_CLIC GST_N family, Chloride Intracellular Ch	96.1
cd03046	76	GST_N_GTT1_like GST_N family, Saccharomyces cerevi	96.0
TIGR00412	76	redox_disulf_2 small redox-active disulfide protei	95.94
cd03043	73	GST_N_1 GST_N family, unknown subfamily 1; compose	95.91
cd03038	84	GST_N_etherase_LigE GST_N family, Beta etherase Li	95.88
PRK09481	211	sspA stringent starvation protein A; Provisional	95.74
cd03075	82	GST_N_Mu GST_N family, Class Mu subfamily; GSTs ar	95.59
PHA02125	75	thioredoxin-like protein	95.52
PRK15113	214	glutathione S-transferase; Provisional	95.44
cd03058	74	GST_N_Tau GST_N family, Class Tau subfamily; GSTs	95.44
cd03044	75	GST_N_EF1Bgamma GST_N family, Gamma subunit of Elo	95.22
cd03057	77	GST_N_Beta GST_N family, Class Beta subfamily; GST	94.7
PLN02395	215	glutathione S-transferase	94.32
TIGR03143	555	AhpF_homolog putative alkyl hydroperoxide reductas	94.08
PRK15317	517	alkyl hydroperoxide reductase subunit F; Provision	93.97
PTZ00057	205	glutathione s-transferase; Provisional	93.91
cd03080	75	GST_N_Metaxin_like GST_N family, Metaxin subfamily	93.91
TIGR03140	515	AhpF alkyl hydroperoxide reductase, F subunit. Thi	92.95
TIGR00862	236	O-ClC intracellular chloride channel protein. Thes	92.94
PLN02473	214	glutathione S-transferase	92.85
PRK05568	142	flavodoxin; Provisional	92.82
PRK13972	215	GSH-dependent disulfide bond oxidoreductase; Provi	92.78
cd02947	93	TRX_family TRX family; composed of two groups: Gro	92.54
TIGR02187	215	GlrX_arch Glutaredoxin-like domain protein. This f	92.11
cd02975	113	PfPDO_like_N Pyrococcus furiosus protein disulfide	91.48
TIGR01262	210	maiA maleylacetoacetate isomerase. Maleylacetoacet	90.61
PRK07308	146	flavodoxin; Validated	90.61
cd02949	97	TRX_NTR TRX domain, novel NADPH thioredoxin reduct	90.17
PF13409	70	GST_N_2: Glutathione S-transferase, N-terminal dom	89.93
PF06953	123	ArsD: Arsenical resistance operon trans-acting rep	89.31
PRK05569	141	flavodoxin; Provisional	88.57
PRK10357	202	putative glutathione S-transferase; Provisional	88.13
PRK06756	148	flavodoxin; Provisional	87.65
PRK09004	146	FMN-binding protein MioC; Provisional	86.61
cd02953	104	DsbDgamma DsbD gamma family; DsbD gamma is the C-t	86.55
COG0716	151	FldA Flavodoxins [Energy production and conversion	85.93
PLN02378	213	glutathione S-transferase DHAR1	85.64
COG0625	211	Gst Glutathione S-transferase [Posttranslational m	85.57
PRK08105	149	flavodoxin; Provisional	85.29
TIGR00333	125	nrdI ribonucleoside-diphosphate reductase 2, opero	84.84
TIGR00147	293	lipid kinase, YegS/Rv2252/BmrU family. The E. coli	84.02
COG4837	106	Uncharacterized protein conserved in bacteria [Fun	83.7
KOG0406|consensus	231		82.59
PF02798	76	GST_N: Glutathione S-transferase, N-terminal domai	82.22
PRK06703	151	flavodoxin; Provisional	82.16
PLN02817	265	glutathione dehydrogenase (ascorbate)	82.06
PF09822	271	ABC_transp_aux: ABC-type uncharacterized transport	81.95
PF07315	93	DUF1462: Protein of unknown function (DUF1462); In	81.55
PRK11914	306	diacylglycerol kinase; Reviewed	81.29
PF00258	143	Flavodoxin_1: Flavodoxin; InterPro: IPR008254 This	81.15
PRK11752	264	putative S-transferase; Provisional	80.99
PRK10629	127	EnvZ/OmpR regulon moderator; Provisional	80.43
PRK10542	201	glutathionine S-transferase; Provisional	80.33
PRK03767	200	NAD(P)H:quinone oxidoreductase; Provisional	80.2
cd02978	72	KaiB_like KaiB-like family; composed of the circad	80.18
KOG4244|consensus	281		80.05
PRK13337	304	putative lipid kinase; Reviewed	80.04

>cd03030 GRX_SH3BGR Glutaredoxin (GRX) family, SH3BGR (SH3 domain binding glutamic acid-rich protein) subfamily; a recently-identified subfamily composed of SH3BGR and similar proteins possessing significant sequence similarity to GRX, but without a redox active CXXC motif

Probab=99.98  E-value=1.4e-32  Score=179.65  Aligned_cols=75  Identities=36%  Similarity=0.679  Sum_probs=69.8

Q ss_pred             cEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeeeec
Q psy3969           4 PYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCGV   83 (86)
Q Consensus         4 ~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yiGg   83 (86)
                      +.||+||+||++++|++|+++++||+++||+|++|||+  .|++.|++|++++|  ++    ++++|||||||||+||||
T Consensus         2 i~vY~ts~~g~~~~k~~~~~v~~lL~~k~I~f~eiDI~--~d~~~r~em~~~~~--~~----~g~~tvPQIFi~~~~iGg   73 (92)
T cd03030           2 IKVYIASSSGSTEIKKRQQEVLGFLEAKKIEFEEVDIS--MNEENRQWMRENVP--NE----NGKPLPPQIFNGDEYCGD   73 (92)
T ss_pred             EEEEEecccccHHHHHHHHHHHHHHHHCCCceEEEecC--CCHHHHHHHHHhcC--CC----CCCCCCCEEEECCEEeeC
Confidence            67999999999999999999999999999999999999  89999999999997  22    256799999999999999


Q ss_pred             cCC
Q psy3969          84 FRY   86 (86)
Q Consensus        84 yd~   86 (86)
                      |||
T Consensus        74 ~dd   76 (92)
T cd03030          74 YEA   76 (92)
T ss_pred             HHH
Confidence            986

The SH3BGR gene was cloned in an effort to identify genes mapping to chromosome 21, which could be involved in the pathogenesis of congenital heart disease affecting Down syndrome newborns. Several human SH3BGR-like (SH3BGRL) genes have been identified since, mapping to different locations in the chromosome. Of these, SH3BGRL3 was identified as a tumor necrosis factor (TNF) alpha inhibitory protein and was also named TIP-B1. Upregulation of expression of SH3BGRL3 is associated with differentiation. It has been suggested that it functions as a regulator of differentiation-related signal transduction pathways.

>PF04908 SH3BGR: SH3-binding, glutamic acid-rich protein; InterPro: IPR006993 This family of proteins, which contains SH3BGRL3, is functionally uncharacterised

Probab=99.97  E-value=9e-31  Score=173.96  Aligned_cols=79  Identities=38%  Similarity=0.711  Sum_probs=62.4

Q ss_pred             cEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcC-CCCCCCCCCCCCCCCeEEeCCeeee
Q psy3969           4 PYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSK-ATPSDSTVKSNPLPPQIFNEEDYCG   82 (86)
Q Consensus         4 ~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g-~~~~~~~~~~~~tvPQIFigd~yiG   82 (86)
                      +.||+||+|||++||++|+++.+||++++|+|++|||+  .|+++|++|++++| ..++  ..+++++|||||+||+|||
T Consensus         3 I~vy~ss~sg~~~ikk~q~~v~~iL~a~kI~fe~vDIa--~~e~~r~~mr~~~g~~~~~--~~~~~~lpPqiF~~~~Y~G   78 (99)
T PF04908_consen    3 IKVYISSISGSREIKKRQQRVLMILEAKKIPFEEVDIA--MDEEARQWMRENAGPEEKD--PGNGKPLPPQIFNGDEYCG   78 (99)
T ss_dssp             EEEEE-SS-SSHHHHHHHHHHHHHHHHTT--EEEEETT--T-HHHHHHHHHHT--CCCS---TSTT--S-EEEETTEEEE
T ss_pred             EEEEEecccCCHHHHHHHHHHHHHHHHcCCCcEEEeCc--CCHHHHHHHHHhccccccC--CCCCCCCCCEEEeCCEEEe
Confidence            68999999999999999999999999999999999999  89999999999994 1111  2257899999999999999


Q ss_pred             ccCC
Q psy3969          83 VFRY   86 (86)
Q Consensus        83 gyd~   86 (86)
                      +||+
T Consensus        79 dye~   82 (99)
T PF04908_consen   79 DYED   82 (99)
T ss_dssp             EHHH
T ss_pred             eHHH
Confidence            9984

SH3BGRL3 is a highly conserved small protein, which is widely expressed and shows a significant similarity to glutaredoxin 1 (GRX1) of Escherichia coli which is predicted to belong to the thioredoxin superfamily. However, SH3BGRL3 lacks both conserved cysteine residues, which characterise the enzymatic active site of GRX. This structural feature raises the possibility that SH3BGRL3 and its homologues could function as endogenous modulators of GRX activity []. ; PDB: 1SJ6_A 1U6T_A 1WRY_A 1T1V_B 1J0F_A 2CT6_A.

>KOG4023|consensus

Probab=99.90  E-value=1.8e-24  Score=145.32  Aligned_cols=81  Identities=36%  Similarity=0.612  Sum_probs=74.7

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCee
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDY   80 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~y   80 (86)
                      |.-+.+|++|+||++++|++|+++.++|+.++|.|+++||+  ..++.|++|.++..++.|+.  +|+++|||||+||+|
T Consensus         1 m~~irvyvasssg~~eik~kqqevv~~Ld~~ki~fk~~di~--~~e~~~~~~~~~~~~e~r~~--~GnplPPqifn~d~Y   76 (108)
T KOG4023|consen    1 MMVIRVYVASSSGSTEIKKKQQEVVRFLDANKIGFKEIDIT--AYEEVRQWMDNNVPDEKRPL--NGNPLPPQIFNGDQY   76 (108)
T ss_pred             CCceEEEEecCCCchHHHhhhhhhhhhhhcccCCcceeecc--chhhhHHHHHhcCChhhcCC--CCCCCCcccccCccc
Confidence            55678999999999999999999999999999999999999  89999999999997667755  467799999999999


Q ss_pred             eeccC
Q psy3969          81 CGVFR   85 (86)
Q Consensus        81 iGgyd   85 (86)
                      |||||
T Consensus        77 ~Gdye   81 (108)
T KOG4023|consen   77 CGDYE   81 (108)
T ss_pred             cccHH
Confidence            99997

>cd03031 GRX_GRX_like Glutaredoxin (GRX) family, GRX-like domain containing protein subfamily; composed of uncharacterized eukaryotic proteins containing a GRX-like domain having only one conserved cysteine, aligning to the C-terminal cysteine of the CXXC motif of GRXs

Probab=99.84  E-value=7.4e-21  Score=133.37  Aligned_cols=76  Identities=17%  Similarity=0.223  Sum_probs=69.6

Q ss_pred             CcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeeee
Q psy3969           3 KPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCG   82 (86)
Q Consensus         3 ~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yiG   82 (86)
                      ++.||.||++|.++....|.+|++||++++|+|+++||+  .+++.+++|++.++  ..    .++.|||||||+++|+|
T Consensus         1 ~VvlYttsl~giR~t~~~C~~ak~iL~~~~V~~~e~DVs--~~~~~~~EL~~~~g--~~----~~~~tvPqVFI~G~~IG   72 (147)
T cd03031           1 RVVLYTTSLRGVRKTFEDCNNVRAILESFRVKFDERDVS--MDSGFREELRELLG--AE----LKAVSLPRVFVDGRYLG   72 (147)
T ss_pred             CEEEEEcCCcCCCCcChhHHHHHHHHHHCCCcEEEEECC--CCHHHHHHHHHHhC--CC----CCCCCCCEEEECCEEEe
Confidence            578999999999999999999999999999999999999  89999999999987  21    14579999999999999


Q ss_pred             ccCC
Q psy3969          83 VFRY   86 (86)
Q Consensus        83 gyd~   86 (86)
                      |+||
T Consensus        73 G~de   76 (147)
T cd03031          73 GAEE   76 (147)
T ss_pred             cHHH
Confidence            9985

This subfamily is predominantly composed of plant proteins. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins via a redox active CXXC motif using a similar dithiol mechanism employed by TRXs. GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. Proteins containing only the C-terminal cysteine are generally redox inactive.

>PRK10824 glutaredoxin-4; Provisional

Probab=99.80  E-value=1.4e-19  Score=122.71  Aligned_cols=66  Identities=12%  Similarity=0.169  Sum_probs=59.4

Q ss_pred             CcEEEEEc-----ccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeC
Q psy3969           3 KPYKISNT-----VRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNE   77 (86)
Q Consensus         3 ~~~~y~ss-----~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFig   77 (86)
                      ++.||+.+     -|++      |.+|++||++.||+|+++||.  .+++.|++|.+++|  +        +||||||||
T Consensus        16 ~Vvvf~Kg~~~~p~Cpy------c~~ak~lL~~~~i~~~~idi~--~d~~~~~~l~~~sg--~--------~TVPQIFI~   77 (115)
T PRK10824         16 PILLYMKGSPKLPSCGF------SAQAVQALSACGERFAYVDIL--QNPDIRAELPKYAN--W--------PTFPQLWVD   77 (115)
T ss_pred             CEEEEECCCCCCCCCch------HHHHHHHHHHcCCCceEEEec--CCHHHHHHHHHHhC--C--------CCCCeEEEC
Confidence            45667665     6999      999999999999999999998  78999999999998  4        499999999


Q ss_pred             CeeeeccCC
Q psy3969          78 EDYCGVFRY   86 (86)
Q Consensus        78 d~yiGgyd~   86 (86)
                      |+|+||||+
T Consensus        78 G~~IGG~dd   86 (115)
T PRK10824         78 GELVGGCDI   86 (115)
T ss_pred             CEEEcChHH
Confidence            999999985

>TIGR00365 monothiol glutaredoxin, Grx4 family

Probab=99.78  E-value=8.4e-19  Score=114.25  Aligned_cols=66  Identities=14%  Similarity=0.261  Sum_probs=58.6

Q ss_pred             CcEEEEE-----cccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeC
Q psy3969           3 KPYKISN-----TVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNE   77 (86)
Q Consensus         3 ~~~~y~s-----s~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFig   77 (86)
                      ++.||..     +-|+.      |.+|+++|+++||+|+++||.  .+++.+++|.+.+|  +        .||||||+|
T Consensus        13 ~Vvvf~kg~~~~~~Cp~------C~~ak~lL~~~~i~~~~~di~--~~~~~~~~l~~~tg--~--------~tvP~vfi~   74 (97)
T TIGR00365        13 PVVLYMKGTPQFPQCGF------SARAVQILKACGVPFAYVNVL--EDPEIRQGIKEYSN--W--------PTIPQLYVK   74 (97)
T ss_pred             CEEEEEccCCCCCCCch------HHHHHHHHHHcCCCEEEEECC--CCHHHHHHHHHHhC--C--------CCCCEEEEC
Confidence            5666765     45888      999999999999999999998  78999999999997  3        399999999


Q ss_pred             CeeeeccCC
Q psy3969          78 EDYCGVFRY   86 (86)
Q Consensus        78 d~yiGgyd~   86 (86)
                      |+|+|||||
T Consensus        75 g~~iGG~dd   83 (97)
T TIGR00365        75 GEFVGGCDI   83 (97)
T ss_pred             CEEEeChHH
Confidence            999999985

The gene for the member of this glutaredoxin family in E. coli, originally designated ydhD, is now designated grxD. Its protein, Grx4, is a monothiol glutaredoxin similar to Grx5 of yeast, which is involved in iron-sulfur cluster formation.

>cd03027 GRX_DEP Glutaredoxin (GRX) family, Dishevelled, Egl-10, and Pleckstrin (DEP) subfamily; composed of uncharacterized proteins containing a GRX domain and additional domains DEP and DUF547, both of which have unknown functions

Probab=99.78  E-value=8.3e-19  Score=107.09  Aligned_cols=66  Identities=21%  Similarity=0.211  Sum_probs=61.2

Q ss_pred             CcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeeee
Q psy3969           3 KPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCG   82 (86)
Q Consensus         3 ~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yiG   82 (86)
                      ++.+|..+-|+.      |.+|+++|+++||+|+++||.  .+++.++++.+.+|  .        .++||||+||+|+|
T Consensus         2 ~v~ly~~~~C~~------C~ka~~~L~~~gi~~~~~di~--~~~~~~~el~~~~g--~--------~~vP~v~i~~~~iG   63 (73)
T cd03027           2 RVTIYSRLGCED------CTAVRLFLREKGLPYVEINID--IFPERKAELEERTG--S--------SVVPQIFFNEKLVG   63 (73)
T ss_pred             EEEEEecCCChh------HHHHHHHHHHCCCceEEEECC--CCHHHHHHHHHHhC--C--------CCcCEEEECCEEEe
Confidence            578999999999      999999999999999999999  78999999999987  3        38999999999999


Q ss_pred             ccCC
Q psy3969          83 VFRY   86 (86)
Q Consensus        83 gyd~   86 (86)
                      ||||
T Consensus        64 g~~~   67 (73)
T cd03027          64 GLTD   67 (73)
T ss_pred             CHHH
Confidence            9986

GRX is a glutathione (GSH) dependent reductase containing a redox active CXXC motif in a TRX fold. It has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. By altering the redox state of target proteins, GRX is involved in many cellular functions.

>PHA03050 glutaredoxin; Provisional

Probab=99.77  E-value=8.6e-19  Score=116.79  Aligned_cols=69  Identities=19%  Similarity=0.254  Sum_probs=61.9

Q ss_pred             CCcEEEEEcccCchhchHHHHHHHHHHHhCCC---ceEEEEccCC-CCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeC
Q psy3969           2 KKPYKISNTVRGVKGVKKRQQRVLMILDSKNI---DYTVIDITEP-GKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNE   77 (86)
Q Consensus         2 ~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I---~f~eiDI~~~-~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFig   77 (86)
                      .++.||.+|-|++      |.+|+++|+++||   +|+++||++. .+++.+++|.+.+|  ++        ||||||+|
T Consensus        13 ~~V~vys~~~CPy------C~~ak~~L~~~~i~~~~~~~i~i~~~~~~~~~~~~l~~~tG--~~--------tVP~IfI~   76 (108)
T PHA03050         13 NKVTIFVKFTCPF------CRNALDILNKFSFKRGAYEIVDIKEFKPENELRDYFEQITG--GR--------TVPRIFFG   76 (108)
T ss_pred             CCEEEEECCCChH------HHHHHHHHHHcCCCcCCcEEEECCCCCCCHHHHHHHHHHcC--CC--------CcCEEEEC
Confidence            4789999999999      9999999999999   8999999831 25788999999998  44        99999999


Q ss_pred             CeeeeccCC
Q psy3969          78 EDYCGVFRY   86 (86)
Q Consensus        78 d~yiGgyd~   86 (86)
                      |+|+|||||
T Consensus        77 g~~iGG~dd   85 (108)
T PHA03050         77 KTSIGGYSD   85 (108)
T ss_pred             CEEEeChHH
Confidence            999999985

>PRK10638 glutaredoxin 3; Provisional

Probab=99.77  E-value=1.5e-18  Score=108.58  Aligned_cols=68  Identities=24%  Similarity=0.284  Sum_probs=63.3

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCee
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDY   80 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~y   80 (86)
                      |.++.+|.++.|+.      |.+|+.+|+.+||+|+++||+  .+++.++++.+.+|  .+        ++||||+|+++
T Consensus         1 m~~v~ly~~~~Cp~------C~~a~~~L~~~gi~y~~~dv~--~~~~~~~~l~~~~g--~~--------~vP~i~~~g~~   62 (83)
T PRK10638          1 MANVEIYTKATCPF------CHRAKALLNSKGVSFQEIPID--GDAAKREEMIKRSG--RT--------TVPQIFIDAQH   62 (83)
T ss_pred             CCcEEEEECCCChh------HHHHHHHHHHcCCCcEEEECC--CCHHHHHHHHHHhC--CC--------CcCEEEECCEE
Confidence            88999999999999      999999999999999999998  78888999999887  33        89999999999


Q ss_pred             eeccCC
Q psy3969          81 CGVFRY   86 (86)
Q Consensus        81 iGgyd~   86 (86)
                      +||||+
T Consensus        63 igG~~~   68 (83)
T PRK10638         63 IGGCDD   68 (83)
T ss_pred             EeCHHH
Confidence            999985

>cd03418 GRX_GRXb_1_3_like Glutaredoxin (GRX) family, GRX bacterial class 1 and 3 (b_1_3)-like subfamily; composed of bacterial GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain

Probab=99.76  E-value=2.9e-18  Score=103.71  Aligned_cols=67  Identities=27%  Similarity=0.253  Sum_probs=61.1

Q ss_pred             CcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeeee
Q psy3969           3 KPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCG   82 (86)
Q Consensus         3 ~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yiG   82 (86)
                      |+++|.++-|+.      |.+|+.+|+++||+|+++||+  .+++.+++|.++.|         ...+||+||++|+++|
T Consensus         1 ~i~ly~~~~Cp~------C~~ak~~L~~~~i~~~~i~i~--~~~~~~~~~~~~~~---------~~~~vP~v~i~g~~ig   63 (75)
T cd03418           1 KVEIYTKPNCPY------CVRAKALLDKKGVDYEEIDVD--GDPALREEMINRSG---------GRRTVPQIFIGDVHIG   63 (75)
T ss_pred             CEEEEeCCCChH------HHHHHHHHHHCCCcEEEEECC--CCHHHHHHHHHHhC---------CCCccCEEEECCEEEe
Confidence            578999999999      999999999999999999999  78999999999887         1238999999999999


Q ss_pred             ccCC
Q psy3969          83 VFRY   86 (86)
Q Consensus        83 gyd~   86 (86)
                      ||+|
T Consensus        64 g~~~   67 (75)
T cd03418          64 GCDD   67 (75)
T ss_pred             ChHH
Confidence            9985

GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known i

>COG0695 GrxC Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]

Probab=99.75  E-value=4.7e-18  Score=107.66  Aligned_cols=67  Identities=22%  Similarity=0.237  Sum_probs=56.7

Q ss_pred             CcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhc-CCCCCCCCCCCCCCCCeEEeCCeee
Q psy3969           3 KPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNS-KATPSDSTVKSNPLPPQIFNEEDYC   81 (86)
Q Consensus         3 ~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~-g~~~~~~~~~~~~tvPQIFigd~yi   81 (86)
                      .+.||..+-|..      |.+|+++|+++|++|++||++. ..++.+++|.++. |  +        .||||||+||.|+
T Consensus         2 ~v~iyt~~~CPy------C~~ak~~L~~~g~~~~~i~~~~-~~~~~~~~~~~~~~g--~--------~tvP~I~i~~~~i   64 (80)
T COG0695           2 NVTIYTKPGCPY------CKRAKRLLDRKGVDYEEIDVDD-DEPEEAREMVKRGKG--Q--------RTVPQIFIGGKHV   64 (80)
T ss_pred             CEEEEECCCCch------HHHHHHHHHHcCCCcEEEEecC-CcHHHHHHHHHHhCC--C--------CCcCEEEECCEEE
Confidence            578999999999      9999999999999999999983 3334666677666 5  3        4999999999999


Q ss_pred             eccCC
Q psy3969          82 GVFRY   86 (86)
Q Consensus        82 Ggyd~   86 (86)
                      ||+++
T Consensus        65 gg~~d   69 (80)
T COG0695          65 GGCDD   69 (80)
T ss_pred             eCccc
Confidence            99875

>TIGR02189 GlrX-like_plant Glutaredoxin-like family

Probab=99.75  E-value=2.3e-18  Score=112.54  Aligned_cols=66  Identities=14%  Similarity=0.136  Sum_probs=57.0

Q ss_pred             CcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhH---HHHHHHhcCCCCCCCCCCCCCCCCeEEeCCe
Q psy3969           3 KPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENE---KEFMQQNSKATPSDSTVKSNPLPPQIFNEED   79 (86)
Q Consensus         3 ~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~---r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~   79 (86)
                      ++.||..+-|+.      |.+|+++|+++||+|+++||+  .+++.   +++|.+.+|  +        .|+||||+||+
T Consensus         9 ~Vvvysk~~Cp~------C~~ak~~L~~~~i~~~~vdid--~~~~~~~~~~~l~~~tg--~--------~tvP~Vfi~g~   70 (99)
T TIGR02189         9 AVVIFSRSSCCM------CHVVKRLLLTLGVNPAVHEID--KEPAGKDIENALSRLGC--S--------PAVPAVFVGGK   70 (99)
T ss_pred             CEEEEECCCCHH------HHHHHHHHHHcCCCCEEEEcC--CCccHHHHHHHHHHhcC--C--------CCcCeEEECCE
Confidence            678999999999      999999999999999999998  56554   445666666  3        49999999999


Q ss_pred             eeeccCC
Q psy3969          80 YCGVFRY   86 (86)
Q Consensus        80 yiGgyd~   86 (86)
                      |+|||||
T Consensus        71 ~iGG~dd   77 (99)
T TIGR02189        71 LVGGLEN   77 (99)
T ss_pred             EEcCHHH
Confidence            9999985

This family of glutaredoxin-like proteins is aparrently limited to plants. Multiple isoforms are found in A. thaliana and O.sativa.

>cd03028 GRX_PICOT_like Glutaredoxin (GRX) family, PKC-interacting cousin of TRX (PICOT)-like subfamily; composed of PICOT and GRX-PICOT-like proteins

Probab=99.75  E-value=3.9e-18  Score=109.01  Aligned_cols=66  Identities=18%  Similarity=0.271  Sum_probs=57.1

Q ss_pred             CcEEEEEc-----ccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeC
Q psy3969           3 KPYKISNT-----VRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNE   77 (86)
Q Consensus         3 ~~~~y~ss-----~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFig   77 (86)
                      ++.||..|     -|+.      |.+|+++|+++||+|+++||.  .+++.+++|.+.+|  ++        |+||||+|
T Consensus         9 ~vvvf~k~~~~~~~Cp~------C~~ak~~L~~~~i~y~~idv~--~~~~~~~~l~~~~g--~~--------tvP~vfi~   70 (90)
T cd03028           9 PVVLFMKGTPEEPRCGF------SRKVVQILNQLGVDFGTFDIL--EDEEVRQGLKEYSN--WP--------TFPQLYVN   70 (90)
T ss_pred             CEEEEEcCCCCCCCCcH------HHHHHHHHHHcCCCeEEEEcC--CCHHHHHHHHHHhC--CC--------CCCEEEEC
Confidence            34555443     5666      999999999999999999998  78999999999998  44        99999999


Q ss_pred             CeeeeccCC
Q psy3969          78 EDYCGVFRY   86 (86)
Q Consensus        78 d~yiGgyd~   86 (86)
                      |+|+||||+
T Consensus        71 g~~iGG~~~   79 (90)
T cd03028          71 GELVGGCDI   79 (90)
T ss_pred             CEEEeCHHH
Confidence            999999985

The non-PICOT members of this family contain only the GRX-like domain, whereas PICOT contains an N-terminal TRX-like domain followed by one to three GRX-like domains. It is interesting to note that PICOT from plants contain three repeats of the GRX-like domain, metazoan proteins (except for insect) have two repeats, while fungal sequences contain only one copy of the domain. PICOT is a protein that interacts with protein kinase C (PKC) theta, a calcium independent PKC isoform selectively expressed in skeletal muscle and T lymphocytes. PICOT inhibits the activation of c-Jun N-terminal kinase and the transcription factors, AP-1 and NF-kB, induced by PKC theta or T-cell activating stimuli. Both GRX and TRX domains of PICOT are required for its activity. Characterized non-PICOT members of this family include CXIP1, a CAX-interacting protein

>TIGR02181 GRX_bact Glutaredoxin, GrxC family

Probab=99.73  E-value=1.4e-17  Score=102.42  Aligned_cols=65  Identities=23%  Similarity=0.209  Sum_probs=60.1

Q ss_pred             cEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeeeec
Q psy3969           4 PYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCGV   83 (86)
Q Consensus         4 ~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yiGg   83 (86)
                      +.+|.++-|+.      |.+|+++|+++||+|+++||+  .+++.++++.+.+|  .        .++||||+||+++||
T Consensus         1 v~ly~~~~Cp~------C~~a~~~L~~~~i~~~~~di~--~~~~~~~~~~~~~g--~--------~~vP~i~i~g~~igg   62 (79)
T TIGR02181         1 VTIYTKPYCPY------CTRAKALLSSKGVTFTEIRVD--GDPALRDEMMQRSG--R--------RTVPQIFIGDVHVGG   62 (79)
T ss_pred             CEEEecCCChh------HHHHHHHHHHcCCCcEEEEec--CCHHHHHHHHHHhC--C--------CCcCEEEECCEEEcC
Confidence            47899999999      999999999999999999999  89999999999887  3        389999999999999


Q ss_pred             cCC
Q psy3969          84 FRY   86 (86)
Q Consensus        84 yd~   86 (86)
                      |++
T Consensus        63 ~~~   65 (79)
T TIGR02181        63 CDD   65 (79)
T ss_pred             hHH
Confidence            975

This family of glutaredoxins includes the E. coli protein GrxC (Grx3) which appears to have a secondary role in reducing ribonucleotide reductase (in the absence of GrxA) possibly indicating a role in the reduction of other protein disulfides.

>PRK11200 grxA glutaredoxin 1; Provisional

Probab=99.72  E-value=1.4e-17  Score=104.35  Aligned_cols=68  Identities=16%  Similarity=0.142  Sum_probs=61.0

Q ss_pred             CcEEEEEcccCchhchHHHHHHHHHHHh-----CCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeC
Q psy3969           3 KPYKISNTVRGVKGVKKRQQRVLMILDS-----KNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNE   77 (86)
Q Consensus         3 ~~~~y~ss~sgn~~vK~~q~~a~~lL~~-----k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFig   77 (86)
                      ++.+|.++-|+.      |.+|+++|++     ++|+|+++||.  .++.++++|.+..|  .      +..+|||||+|
T Consensus         2 ~v~iy~~~~C~~------C~~a~~~L~~l~~~~~~i~~~~idi~--~~~~~~~el~~~~~--~------~~~~vP~ifi~   65 (85)
T PRK11200          2 FVVIFGRPGCPY------CVRAKELAEKLSEERDDFDYRYVDIH--AEGISKADLEKTVG--K------PVETVPQIFVD   65 (85)
T ss_pred             EEEEEeCCCChh------HHHHHHHHHhhcccccCCcEEEEECC--CChHHHHHHHHHHC--C------CCCcCCEEEEC
Confidence            789999999999      9999999999     99999999998  67778889998887  2      23489999999


Q ss_pred             CeeeeccCC
Q psy3969          78 EDYCGVFRY   86 (86)
Q Consensus        78 d~yiGgyd~   86 (86)
                      |+++|||+|
T Consensus        66 g~~igg~~~   74 (85)
T PRK11200         66 QKHIGGCTD   74 (85)
T ss_pred             CEEEcCHHH
Confidence            999999985

>cd03029 GRX_hybridPRX5 Glutaredoxin (GRX) family, PRX5 hybrid subfamily; composed of hybrid proteins containing peroxiredoxin (PRX) and GRX domains, which is found in some pathogenic bacteria and cyanobacteria

Probab=99.71  E-value=3.1e-17  Score=99.67  Aligned_cols=65  Identities=14%  Similarity=0.103  Sum_probs=57.1

Q ss_pred             CcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeeee
Q psy3969           3 KPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCG   82 (86)
Q Consensus         3 ~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yiG   82 (86)
                      ++.+|.++-|+.      |.+|+++|+++||+|+++||+  .++ ...+|++.+|  .        .++||||+||+++|
T Consensus         2 ~v~lys~~~Cp~------C~~ak~~L~~~~i~~~~~~v~--~~~-~~~~~~~~~g--~--------~~vP~ifi~g~~ig   62 (72)
T cd03029           2 SVSLFTKPGCPF------CARAKAALQENGISYEEIPLG--KDI-TGRSLRAVTG--A--------MTVPQVFIDGELIG   62 (72)
T ss_pred             eEEEEECCCCHH------HHHHHHHHHHcCCCcEEEECC--CCh-hHHHHHHHhC--C--------CCcCeEEECCEEEe
Confidence            678999999999      999999999999999999998  566 4566777776  3        38999999999999


Q ss_pred             ccCC
Q psy3969          83 VFRY   86 (86)
Q Consensus        83 gyd~   86 (86)
                      ||+|
T Consensus        63 g~~~   66 (72)
T cd03029          63 GSDD   66 (72)
T ss_pred             CHHH
Confidence            9975

PRXs are thiol-specific antioxidant (TSA) proteins that confer a protective antioxidant role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins. PRX-GRX hybrid proteins from Haemophilus influenza and Neisseria meningitis exhibit GSH-dependent peroxidase activity. The flow of reducing equivalents in the catalytic cycle of the hybrid protein goes from NADPH - GSH reductase - GSH - GRX domain of hybrid - PRX domain of hybrid - peroxide substrate.

>TIGR02190 GlrX-dom Glutaredoxin-family domain

Probab=99.68  E-value=9.7e-17  Score=99.91  Aligned_cols=65  Identities=12%  Similarity=0.103  Sum_probs=56.5

Q ss_pred             CcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeeee
Q psy3969           3 KPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCG   82 (86)
Q Consensus         3 ~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yiG   82 (86)
                      ++.+|..+-|+.      |.+|+++|+++||+|+++||+  .+++. .+|.+.+|  .        .++||||+||+++|
T Consensus         9 ~V~ly~~~~Cp~------C~~ak~~L~~~gi~y~~idi~--~~~~~-~~~~~~~g--~--------~~vP~i~i~g~~ig   69 (79)
T TIGR02190         9 SVVVFTKPGCPF------CAKAKATLKEKGYDFEEIPLG--NDARG-RSLRAVTG--A--------TTVPQVFIGGKLIG   69 (79)
T ss_pred             CEEEEECCCCHh------HHHHHHHHHHcCCCcEEEECC--CChHH-HHHHHHHC--C--------CCcCeEEECCEEEc
Confidence            688999999999      999999999999999999998  55554 56777666  3        48999999999999


Q ss_pred             ccCC
Q psy3969          83 VFRY   86 (86)
Q Consensus        83 gyd~   86 (86)
                      ||+|
T Consensus        70 G~~~   73 (79)
T TIGR02190        70 GSDE   73 (79)
T ss_pred             CHHH
Confidence            9975

This C-terminal domain with homology to glutaredoxin is fused to an N-terminal peroxiredoxin-like domain.

>TIGR02183 GRXA Glutaredoxin, GrxA family

Probab=99.66  E-value=3.4e-16  Score=99.27  Aligned_cols=67  Identities=16%  Similarity=0.148  Sum_probs=57.5

Q ss_pred             cEEEEEcccCchhchHHHHHHHHHHHhC-----CCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCC
Q psy3969           4 PYKISNTVRGVKGVKKRQQRVLMILDSK-----NIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEE   78 (86)
Q Consensus         4 ~~~y~ss~sgn~~vK~~q~~a~~lL~~k-----~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd   78 (86)
                      +.+|.++-|+.      |.+|+++|+++     +++|+++||.  .+...++++.+.+|  +      +..+|||||+||
T Consensus         2 V~vys~~~Cp~------C~~ak~~L~~~~~~~~~i~~~~idi~--~~~~~~~~l~~~~g--~------~~~tVP~ifi~g   65 (86)
T TIGR02183         2 VVIFGRPGCPY------CVRAKQLAEKLAIERADFEFRYIDIH--AEGISKADLEKTVG--K------PVETVPQIFVDE   65 (86)
T ss_pred             EEEEeCCCCcc------HHHHHHHHHHhCcccCCCcEEEEECC--CCHHHHHHHHHHhC--C------CCCCcCeEEECC
Confidence            57999999999      99999999998     5789999998  56667888888887  2      124899999999


Q ss_pred             eeeeccCC
Q psy3969          79 DYCGVFRY   86 (86)
Q Consensus        79 ~yiGgyd~   86 (86)
                      +++|||||
T Consensus        66 ~~igG~~d   73 (86)
T TIGR02183        66 KHVGGCTD   73 (86)
T ss_pred             EEecCHHH
Confidence            99999985

This model includes the E. coli glyutaredoxin GrxA which appears to have primary responsibility for the reduction of ribonucleotide reductase.

>cd02066 GRX_family Glutaredoxin (GRX) family; composed of GRX, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain

Probab=99.64  E-value=8.9e-16  Score=89.47  Aligned_cols=66  Identities=26%  Similarity=0.325  Sum_probs=59.7

Q ss_pred             CcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeeee
Q psy3969           3 KPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCG   82 (86)
Q Consensus         3 ~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yiG   82 (86)
                      ++.+|.++.|+.      |.+|+.+|++++++|+++||.  .+++.+++|.+.+|  .        .++|+||+||+++|
T Consensus         1 ~v~ly~~~~Cp~------C~~~~~~L~~~~i~~~~~di~--~~~~~~~~l~~~~~--~--------~~~P~~~~~~~~ig   62 (72)
T cd02066           1 KVVVFSKSTCPY------CKRAKRLLESLGIEFEEIDIL--EDGELREELKELSG--W--------PTVPQIFINGEFIG   62 (72)
T ss_pred             CEEEEECCCCHH------HHHHHHHHHHcCCcEEEEECC--CCHHHHHHHHHHhC--C--------CCcCEEEECCEEEe
Confidence            467899999988      999999999999999999999  78889999999887  2        38999999999999


Q ss_pred             ccCC
Q psy3969          83 VFRY   86 (86)
Q Consensus        83 gyd~   86 (86)
                      |+++
T Consensus        63 g~~~   66 (72)
T cd02066          63 GYDD   66 (72)
T ss_pred             cHHH
Confidence            9974

GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known including human GRX1 and GRX2, as well as E. coli GRX1 and GRX3, which

>PRK12759 bifunctional gluaredoxin/ribonucleoside-diphosphate reductase subunit beta; Provisional

Probab=99.63  E-value=5.4e-16  Score=122.21  Aligned_cols=73  Identities=16%  Similarity=0.161  Sum_probs=58.5

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCC---CCCCCCCCCCCCCeEEeC
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKAT---PSDSTVKSNPLPPQIFNE   77 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~---~~~~~~~~~~tvPQIFig   77 (86)
                      |+++.||.++-|+.      |.+|+++|+++||+|++|||+  .+++..+.+. ..++.   ++    .+..||||||+|
T Consensus         1 m~~V~vys~~~Cp~------C~~aK~~L~~~gi~~~~idi~--~~~~~~~~~~-~~~~~~~~~~----~g~~tvP~ifi~   67 (410)
T PRK12759          1 MVEVRIYTKTNCPF------CDLAKSWFGANDIPFTQISLD--DDVKRAEFYA-EVNKNILLVE----EHIRTVPQIFVG   67 (410)
T ss_pred             CCcEEEEeCCCCHH------HHHHHHHHHHCCCCeEEEECC--CChhHHHHHH-HHhhcccccc----CCCCccCeEEEC
Confidence            89999999999999      999999999999999999998  6776554333 32200   00    134599999999


Q ss_pred             CeeeeccCC
Q psy3969          78 EDYCGVFRY   86 (86)
Q Consensus        78 d~yiGgyd~   86 (86)
                      |+|+||||+
T Consensus        68 ~~~igGf~~   76 (410)
T PRK12759         68 DVHIGGYDN   76 (410)
T ss_pred             CEEEeCchH
Confidence            999999985

>PF00462 Glutaredoxin: Glutaredoxin; InterPro: IPR002109 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors

Probab=99.63  E-value=1.4e-15  Score=89.76  Aligned_cols=60  Identities=20%  Similarity=0.274  Sum_probs=54.8

Q ss_pred             cEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeee
Q psy3969           4 PYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYC   81 (86)
Q Consensus         4 ~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yi   81 (86)
                      +.+|.+.-|+.      |.+|+++|+++||+|+++||+  .++++++++++.+|  .        .++||||+||+|+
T Consensus         1 V~vy~~~~C~~------C~~~~~~L~~~~i~y~~~dv~--~~~~~~~~l~~~~g--~--------~~~P~v~i~g~~I   60 (60)
T PF00462_consen    1 VVVYTKPGCPY------CKKAKEFLDEKGIPYEEVDVD--EDEEAREELKELSG--V--------RTVPQVFIDGKFI   60 (60)
T ss_dssp             EEEEESTTSHH------HHHHHHHHHHTTBEEEEEEGG--GSHHHHHHHHHHHS--S--------SSSSEEEETTEEE
T ss_pred             cEEEEcCCCcC------HHHHHHHHHHcCCeeeEcccc--cchhHHHHHHHHcC--C--------CccCEEEECCEEC
Confidence            46888888888      999999999999999999999  78999999999987  3        3899999999986

Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. This entry represents Glutaredoxin.; GO: 0009055 electron carrier activity, 0015035 protein disulfide oxidoreductase activity, 0045454 cell redox homeostasis; PDB: 1QFN_A 1GRX_A 1EGO_A 1EGR_A 3RHC_A 3RHB_A 3IPZ_A 1NHO_A 3GX8_A 3D5J_A ....

>PTZ00062 glutaredoxin; Provisional

Probab=99.63  E-value=1.1e-15  Score=112.00  Aligned_cols=66  Identities=18%  Similarity=0.242  Sum_probs=58.2

Q ss_pred             CcEEEEEc-----ccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeC
Q psy3969           3 KPYKISNT-----VRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNE   77 (86)
Q Consensus         3 ~~~~y~ss-----~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFig   77 (86)
                      ++.+|..+     -|+.      |.+|+++|+++||+|+++||.  .|++.|++|.+.+|  +        +||||||||
T Consensus       114 ~Vvvf~Kg~~~~p~C~~------C~~~k~~L~~~~i~y~~~DI~--~d~~~~~~l~~~sg--~--------~TvPqVfI~  175 (204)
T PTZ00062        114 KILLFMKGSKTFPFCRF------SNAVVNMLNSSGVKYETYNIF--EDPDLREELKVYSN--W--------PTYPQLYVN  175 (204)
T ss_pred             CEEEEEccCCCCCCChh------HHHHHHHHHHcCCCEEEEEcC--CCHHHHHHHHHHhC--C--------CCCCeEEEC
Confidence            45566663     5787      999999999999999999999  78999999999987  3        499999999


Q ss_pred             CeeeeccCC
Q psy3969          78 EDYCGVFRY   86 (86)
Q Consensus        78 d~yiGgyd~   86 (86)
                      |+|+||||+
T Consensus       176 G~~IGG~d~  184 (204)
T PTZ00062        176 GELIGGHDI  184 (204)
T ss_pred             CEEEcChHH
Confidence            999999985

>PRK10329 glutaredoxin-like protein; Provisional

Probab=99.54  E-value=3.6e-14  Score=89.90  Aligned_cols=64  Identities=11%  Similarity=0.117  Sum_probs=58.4

Q ss_pred             CcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeeee
Q psy3969           3 KPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCG   82 (86)
Q Consensus         3 ~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yiG   82 (86)
                      ++.+|.++.|+.      |.+|+.+|+++||+|+++||+  .+++++++|+.. |  .+        ++|+||+||.+++
T Consensus         2 ~v~lYt~~~Cp~------C~~ak~~L~~~gI~~~~idi~--~~~~~~~~~~~~-g--~~--------~vPvv~i~~~~~~   62 (81)
T PRK10329          2 RITIYTRNDCVQ------CHATKRAMESRGFDFEMINVD--RVPEAAETLRAQ-G--FR--------QLPVVIAGDLSWS   62 (81)
T ss_pred             EEEEEeCCCCHh------HHHHHHHHHHCCCceEEEECC--CCHHHHHHHHHc-C--CC--------CcCEEEECCEEEe
Confidence            688999999999      999999999999999999999  789999998773 5  33        8999999999999


Q ss_pred             ccC
Q psy3969          83 VFR   85 (86)
Q Consensus        83 gyd   85 (86)
                      ||+
T Consensus        63 Gf~   65 (81)
T PRK10329         63 GFR   65 (81)
T ss_pred             cCC
Confidence            997

>TIGR02194 GlrX_NrdH Glutaredoxin-like protein NrdH

Probab=99.53  E-value=5.4e-14  Score=85.84  Aligned_cols=63  Identities=14%  Similarity=0.111  Sum_probs=55.3

Q ss_pred             cEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCC-eeee
Q psy3969           4 PYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEE-DYCG   82 (86)
Q Consensus         4 ~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd-~yiG   82 (86)
                      +.+|.++.|+.      |.+|+++|+++||+|+++||.  .+++.++++.+ .|  .+        +||+||++| +++|
T Consensus         1 v~ly~~~~Cp~------C~~ak~~L~~~~i~~~~~di~--~~~~~~~~~~~-~g--~~--------~vP~v~~~g~~~~~   61 (72)
T TIGR02194         1 ITVYSKNNCVQ------CKMTKKALEEHGIAFEEINID--EQPEAIDYVKA-QG--FR--------QVPVIVADGDLSWS   61 (72)
T ss_pred             CEEEeCCCCHH------HHHHHHHHHHCCCceEEEECC--CCHHHHHHHHH-cC--Cc--------ccCEEEECCCcEEe
Confidence            46899999999      999999999999999999999  78999998876 36  33        899999955 5999


Q ss_pred             ccC
Q psy3969          83 VFR   85 (86)
Q Consensus        83 gyd   85 (86)
                      ||+
T Consensus        62 G~~   64 (72)
T TIGR02194        62 GFR   64 (72)
T ss_pred             ccC
Confidence            997

NrdH-redoxin is a representative of a class of small redox proteins that contain a conserved CXXC motif and are characterized by a glutaredoxin-like amino acid sequence and thioredoxin-like activity profile. Unlike other the glutaredoxins to which it is most closely related, NrdH aparrently does not interact with glutathione/glutathione reductase, but rather with thioredoxin reductase to catalyze the reduction of ribonucleotide reductase.

>cd03419 GRX_GRXh_1_2_like Glutaredoxin (GRX) family, GRX human class 1 and 2 (h_1_2)-like subfamily; composed of proteins similar to human GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain

Probab=99.52  E-value=4.5e-14  Score=86.10  Aligned_cols=68  Identities=12%  Similarity=0.197  Sum_probs=57.8

Q ss_pred             CcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCC-HhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeee
Q psy3969           3 KPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGK-ENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYC   81 (86)
Q Consensus         3 ~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d-~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yi   81 (86)
                      |+.+|.+.-|+.      |.+|+.+|++.+++|+.++|+...+ .+.+++|.+.+|  .        .++||||++|+++
T Consensus         1 ~v~~y~~~~Cp~------C~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g--~--------~~~P~v~~~g~~i   64 (82)
T cd03419           1 PVVVFSKSYCPY------CKRAKSLLKELGVKPAVVELDQHEDGSEIQDYLQELTG--Q--------RTVPNVFIGGKFI   64 (82)
T ss_pred             CEEEEEcCCCHH------HHHHHHHHHHcCCCcEEEEEeCCCChHHHHHHHHHHhC--C--------CCCCeEEECCEEE
Confidence            578899999999      9999999999999999999973233 556778888887  3        4899999999999


Q ss_pred             eccCC
Q psy3969          82 GVFRY   86 (86)
Q Consensus        82 Ggyd~   86 (86)
                      ||+++
T Consensus        65 gg~~~   69 (82)
T cd03419          65 GGCDD   69 (82)
T ss_pred             cCHHH
Confidence            99974

GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes

>TIGR02180 GRX_euk Glutaredoxin

Probab=99.49  E-value=1.3e-13  Score=84.02  Aligned_cols=67  Identities=15%  Similarity=0.261  Sum_probs=55.9

Q ss_pred             cEEEEEcccCchhchHHHHHHHHHHHhCCCc--eEEEEccCCC-CHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCee
Q psy3969           4 PYKISNTVRGVKGVKKRQQRVLMILDSKNID--YTVIDITEPG-KENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDY   80 (86)
Q Consensus         4 ~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~--f~eiDI~~~~-d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~y   80 (86)
                      +.+|+++-|+.      |.+|+.+|++.+++  |+.++|+... .++.++++.+.+|  .        .++||||+||++
T Consensus         1 V~~f~~~~Cp~------C~~~~~~L~~~~i~~~~~~~~v~~~~~~~~~~~~l~~~~g--~--------~~vP~v~i~g~~   64 (84)
T TIGR02180         1 VVVFSKSYCPY------CKKAKEILAKLNVKPAYEVVELDQLSNGSEIQDYLEEITG--Q--------RTVPNIFINGKF   64 (84)
T ss_pred             CEEEECCCChh------HHHHHHHHHHcCCCCCCEEEEeeCCCChHHHHHHHHHHhC--C--------CCCCeEEECCEE
Confidence            46899999999      99999999999999  9999997322 3555677877776  3        389999999999


Q ss_pred             eeccCC
Q psy3969          81 CGVFRY   86 (86)
Q Consensus        81 iGgyd~   86 (86)
                      +||+||
T Consensus        65 igg~~~   70 (84)
T TIGR02180        65 IGGCSD   70 (84)
T ss_pred             EcCHHH
Confidence            999985

This model represents eukaryotic glutaredoxins and includes sequences from fungi, plants and metazoans as well as viruses.

>KOG1752|consensus

Probab=99.39  E-value=1.5e-12  Score=87.11  Aligned_cols=69  Identities=12%  Similarity=0.154  Sum_probs=53.9

Q ss_pred             CCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCH-hHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCee
Q psy3969           2 KKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKE-NEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDY   80 (86)
Q Consensus         2 ~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~-~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~y   80 (86)
                      .++.||.-|.|..      |.+|+.||...++.+..+.++...+. +..+.+.+.+|          .+|||+|||||+|
T Consensus        14 ~~VVifSKs~C~~------c~~~k~ll~~~~v~~~vvELD~~~~g~eiq~~l~~~tg----------~~tvP~vFI~Gk~   77 (104)
T KOG1752|consen   14 NPVVIFSKSSCPY------CHRAKELLSDLGVNPKVVELDEDEDGSEIQKALKKLTG----------QRTVPNVFIGGKF   77 (104)
T ss_pred             CCEEEEECCcCch------HHHHHHHHHhCCCCCEEEEccCCCCcHHHHHHHHHhcC----------CCCCCEEEECCEE
Confidence            3567888899999      99999999999999999999843333 23333333334          4499999999999


Q ss_pred             eeccCC
Q psy3969          81 CGVFRY   86 (86)
Q Consensus        81 iGgyd~   86 (86)
                      +||++|
T Consensus        78 iGG~~d   83 (104)
T KOG1752|consen   78 IGGASD   83 (104)
T ss_pred             EcCHHH
Confidence            999975

>TIGR02196 GlrX_YruB Glutaredoxin-like protein, YruB-family

Probab=99.27  E-value=3.9e-11  Score=70.19  Aligned_cols=65  Identities=17%  Similarity=0.066  Sum_probs=58.0

Q ss_pred             CcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeeee
Q psy3969           3 KPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCG   82 (86)
Q Consensus         3 ~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yiG   82 (86)
                      ++.+|+++-|+.      |.+++.+|+.++|+|.++||+  .+++.++++.+..|  .        ..+|.||++|+.++
T Consensus         1 ~i~lf~~~~C~~------C~~~~~~l~~~~i~~~~vdi~--~~~~~~~~~~~~~~--~--------~~vP~~~~~~~~~~   62 (74)
T TIGR02196         1 KVKVYTTPWCPP------CKKAKEYLTSKGIAFEEIDVE--KDSAAREEVLKVLG--Q--------RGVPVIVIGHKIIV   62 (74)
T ss_pred             CEEEEcCCCChh------HHHHHHHHHHCCCeEEEEecc--CCHHHHHHHHHHhC--C--------CcccEEEECCEEEe
Confidence            368999999999      999999999999999999998  78888888888886  2        37999999999998


Q ss_pred             ccC
Q psy3969          83 VFR   85 (86)
Q Consensus        83 gyd   85 (86)
                      ||+
T Consensus        63 g~~   65 (74)
T TIGR02196        63 GFD   65 (74)
T ss_pred             eCC
Confidence            885

This glutaredoxin-like protein family contains the conserved CxxC motif and includes the Clostridium pasteurianum protein YruB which has been cloned from a rubredoxin operon. Somewhat related to NrdH, it is unknown whether this protein actually interacts with glutathione/glutathione reducatase, or, like NrdH, some other reductant system.

>KOG2824|consensus

Probab=99.21  E-value=3.4e-11  Score=92.44  Aligned_cols=75  Identities=19%  Similarity=0.225  Sum_probs=68.1

Q ss_pred             CcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeeee
Q psy3969           3 KPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCG   82 (86)
Q Consensus         3 ~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yiG   82 (86)
                      .+.+|+||+.|-++.=..|.++..||++.+|.|.|-||+  .|.+-|+||++..|+  .    ....+.||+|++|.|||
T Consensus       132 ~VVvY~TsLRgvRkTfE~C~~VR~ilesf~V~v~ERDVS--Md~~fr~EL~~~lg~--~----~~~~~LPrVFV~GryIG  203 (281)
T KOG2824|consen  132 RVVVYTTSLRGVRKTFEDCNAVRAILESFRVKVDERDVS--MDSEFREELQELLGE--D----EKAVSLPRVFVKGRYIG  203 (281)
T ss_pred             eEEEEEcccchhhhhHHHHHHHHHHHHhCceEEEEeccc--ccHHHHHHHHHHHhc--c----cccCccCeEEEccEEec
Confidence            478999999999999999999999999999999999999  999999999999983  0    13567889999999999


Q ss_pred             ccC
Q psy3969          83 VFR   85 (86)
Q Consensus        83 gyd   85 (86)
                      |-+
T Consensus       204 gae  206 (281)
T KOG2824|consen  204 GAE  206 (281)
T ss_pred             cHH
Confidence            965

>cd02976 NrdH NrdH-redoxin (NrdH) family; NrdH is a small monomeric protein with a conserved redox active CXXC motif within a TRX fold, characterized by a glutaredoxin (GRX)-like sequence and TRX-like activity profile

Probab=99.20  E-value=1.6e-10  Score=67.55  Aligned_cols=65  Identities=12%  Similarity=0.122  Sum_probs=56.6

Q ss_pred             CcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeeee
Q psy3969           3 KPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCG   82 (86)
Q Consensus         3 ~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yiG   82 (86)
                      ++.+|.++-|+.      |.+++.+|+.++++|..+||+  .++..++++.+..+  .        ..+|.||++++.++
T Consensus         1 ~v~l~~~~~c~~------c~~~~~~l~~~~i~~~~~~i~--~~~~~~~~~~~~~~--~--------~~vP~i~~~~~~i~   62 (73)
T cd02976           1 EVTVYTKPDCPY------CKATKRFLDERGIPFEEVDVD--EDPEALEELKKLNG--Y--------RSVPVVVIGDEHLS   62 (73)
T ss_pred             CEEEEeCCCChh------HHHHHHHHHHCCCCeEEEeCC--CCHHHHHHHHHHcC--C--------cccCEEEECCEEEe
Confidence            357888888988      999999999999999999998  67888888887764  2        37999999999999


Q ss_pred             ccC
Q psy3969          83 VFR   85 (86)
Q Consensus        83 gyd   85 (86)
                      |++
T Consensus        63 g~~   65 (73)
T cd02976          63 GFR   65 (73)
T ss_pred             cCC
Confidence            986

In vitro, it displays protein disulfide reductase activity that is dependent on TRX reductase, not glutathione (GSH). It is part of the NrdHIEF operon, where NrdEF codes for class Ib ribonucleotide reductase (RNR-Ib), an efficient enzyme at low oxygen levels. Under these conditions when GSH is mostly conjugated to spermidine, NrdH can still function and act as a hydrogen donor for RNR-Ib. It has been suggested that the NrdHEF system may be the oldest RNR reducing system, capable of functioning in a microaerophilic environment, where GSH was not yet available. NrdH from Corynebacterium ammoniagenes can form domain-swapped dimers, although it is unknown if this happens in vivo. Domain-swapped dimerization, which results in the blocking of the TRX reductase binding site, cou

>COG0278 Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]

Probab=99.19  E-value=3.2e-11  Score=81.35  Aligned_cols=53  Identities=17%  Similarity=0.382  Sum_probs=49.4

Q ss_pred             HHHHHHHHHhCC-CceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeeeeccC
Q psy3969          21 QQRVLMILDSKN-IDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCGVFR   85 (86)
Q Consensus        21 q~~a~~lL~~k~-I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yiGgyd   85 (86)
                      -.+|.++|...| ++|..+||-  .|++.|+.+.+-++          |+|.||+|++|+++||||
T Consensus        33 S~~~vqiL~~~g~v~~~~vnVL--~d~eiR~~lk~~s~----------WPT~PQLyi~GEfvGG~D   86 (105)
T COG0278          33 SAQAVQILSACGVVDFAYVDVL--QDPEIRQGLKEYSN----------WPTFPQLYVNGEFVGGCD   86 (105)
T ss_pred             cHHHHHHHHHcCCcceeEEeec--cCHHHHhccHhhcC----------CCCCceeeECCEEeccHH
Confidence            578999999999 899999998  79999999998885          789999999999999997

>KOG0911|consensus

Probab=99.03  E-value=4.9e-10  Score=84.02  Aligned_cols=53  Identities=25%  Similarity=0.491  Sum_probs=49.1

Q ss_pred             HHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeeeeccC
Q psy3969          21 QQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCGVFR   85 (86)
Q Consensus        21 q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yiGgyd   85 (86)
                      -.++..+|.+.||+|.-.||.  .|++.|+-..+-+.          |+|.||+|++|+++||+|
T Consensus       157 S~~~v~iL~~~nV~~~~fdIL--~DeelRqglK~fSd----------WPTfPQlyI~GEFiGGlD  209 (227)
T KOG0911|consen  157 SRQLVGILQSHNVNYTIFDVL--TDEELRQGLKEFSD----------WPTFPQLYVKGEFIGGLD  209 (227)
T ss_pred             cHHHHHHHHHcCCCeeEEecc--CCHHHHHHhhhhcC----------CCCccceeECCEeccCcH
Confidence            468899999999999999999  89999999888774          789999999999999997

>TIGR02200 GlrX_actino Glutaredoxin-like protein

Probab=99.01  E-value=2.2e-09  Score=64.05  Aligned_cols=64  Identities=16%  Similarity=0.125  Sum_probs=54.0

Q ss_pred             CcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhc-CCCCCCCCCCCCCCCCeEEe-CCee
Q psy3969           3 KPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNS-KATPSDSTVKSNPLPPQIFN-EEDY   80 (86)
Q Consensus         3 ~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~-g~~~~~~~~~~~~tvPQIFi-gd~y   80 (86)
                      ++.+|+++-|+.      |.+++.+|+.++++|+.+||+  .+++..+++.+.. +          ..++|+|++ ||..
T Consensus         1 ~v~ly~~~~C~~------C~~~~~~L~~~~~~~~~idi~--~~~~~~~~~~~~~~~----------~~~vP~i~~~~g~~   62 (77)
T TIGR02200         1 TITVYGTTWCGY------CAQLMRTLDKLGAAYEWVDIE--EDEGAADRVVSVNNG----------NMTVPTVKFADGSF   62 (77)
T ss_pred             CEEEEECCCChh------HHHHHHHHHHcCCceEEEeCc--CCHhHHHHHHHHhCC----------CceeCEEEECCCeE
Confidence            478999999999      999999999999999999998  6888888888876 4          238999965 6677


Q ss_pred             eecc
Q psy3969          81 CGVF   84 (86)
Q Consensus        81 iGgy   84 (86)
                      +...
T Consensus        63 l~~~   66 (77)
T TIGR02200        63 LTNP   66 (77)
T ss_pred             ecCC
Confidence            6543

This family of glutaredoxin-like proteins is limited to the Actinobacteria and contains the conserved CxxC motif.

>cd02973 TRX_GRX_like Thioredoxin (TRX)-Glutaredoxin (GRX)-like family; composed of archaeal and bacterial proteins that show similarity to both TRX and GRX, including the C-terminal TRX-fold subdomain of Pyrococcus furiosus protein disulfide oxidoreductase (PfPDO)

Probab=98.83  E-value=1.5e-08  Score=59.94  Aligned_cols=60  Identities=12%  Similarity=-0.022  Sum_probs=48.5

Q ss_pred             CCcEEEEEcccCchhchHHHHHHHHHHHhC-----CCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEe
Q psy3969           2 KKPYKISNTVRGVKGVKKRQQRVLMILDSK-----NIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFN   76 (86)
Q Consensus         2 ~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k-----~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFi   76 (86)
                      +++.+|+++-|+.      |.+++.+|+..     +|+|..+|++  .+++    +.++.|  .+        ++|+||+
T Consensus         1 ~~v~~f~~~~C~~------C~~~~~~l~~l~~~~~~i~~~~id~~--~~~~----l~~~~~--i~--------~vPti~i   58 (67)
T cd02973           1 VNIEVFVSPTCPY------CPDAVQAANRIAALNPNISAEMIDAA--EFPD----LADEYG--VM--------SVPAIVI   58 (67)
T ss_pred             CEEEEEECCCCCC------cHHHHHHHHHHHHhCCceEEEEEEcc--cCHh----HHHHcC--Cc--------ccCEEEE
Confidence            4688999999999      99999999864     7999999998  5554    445555  22        7999999


Q ss_pred             CCeeeec
Q psy3969          77 EEDYCGV   83 (86)
Q Consensus        77 gd~yiGg   83 (86)
                      ||++++-
T Consensus        59 ~~~~~~~   65 (67)
T cd02973          59 NGKVEFV   65 (67)
T ss_pred             CCEEEEe
Confidence            9999863

All members contain a redox-active CXXC motif and may function as PDOs. The archaeal proteins Mj0307 and Mt807 show structures more similar to GRX, but activities more similar to TRX. Some members of the family are similar to PfPDO in that they contain a second CXXC motif located in a second TRX-fold subdomain at the N-terminus; the superimposable N- and C-terminal TRX subdomains form a compact structure. PfPDO is postulated to be the archaeal counterpart of bacterial DsbA and eukaryotic protein disulfide isomerase (PDI). The C-terminal CXXC motif of PfPDO is required for its oxidase, reductase and isomerase activities. Also included in the family is the C-terminal TRX-fold subdomain of the N-terminal domain (NTD) of bacteri

>cd00570 GST_N_family Glutathione S-transferase (GST) family, N-terminal domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress

Probab=98.45  E-value=1.1e-06  Score=49.60  Aligned_cols=62  Identities=15%  Similarity=0.015  Sum_probs=48.2

Q ss_pred             EEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeeeecc
Q psy3969           5 YKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCGVF   84 (86)
Q Consensus         5 ~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yiGgy   84 (86)
                      .+|+...|++      |.+++.+|+.+||+|+.++++  .++....++.+.++          ..++|.++.+|..+++.
T Consensus         2 ~ly~~~~~~~------~~~~~~~l~~~~i~~~~~~~~--~~~~~~~~~~~~~~----------~~~~P~l~~~~~~~~es   63 (71)
T cd00570           2 KLYYFPGSPR------SLRVRLALEEKGLPYELVPVD--LGEGEQEEFLALNP----------LGKVPVLEDGGLVLTES   63 (71)
T ss_pred             EEEeCCCCcc------HHHHHHHHHHcCCCcEEEEeC--CCCCCCHHHHhcCC----------CCCCCEEEECCEEEEcH
Confidence            5788888888      999999999999999999997  33332224555443          34899999999988764

In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK subfamily, a member of the DsbA family). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical doma

>cd03041 GST_N_2GST_N GST_N family, 2 repeats of the N-terminal domain of soluble GSTs (2 GST_N) subfamily; composed of uncharacterized proteins

Probab=98.39  E-value=3.3e-06  Score=51.70  Aligned_cols=62  Identities=6%  Similarity=-0.068  Sum_probs=48.1

Q ss_pred             cEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEe--CCeee
Q psy3969           4 PYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFN--EEDYC   81 (86)
Q Consensus         4 ~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFi--gd~yi   81 (86)
                      +.+|.++.|++      |.+++.+|+.+||+|++++|.  .++..+.++++.++          ..+||.+-.  ||..+
T Consensus         2 ~~Ly~~~~sp~------~~kv~~~L~~~gi~y~~~~v~--~~~~~~~~~~~~~p----------~~~vP~l~~~~~~~~l   63 (77)
T cd03041           2 LELYEFEGSPF------CRLVREVLTELELDVILYPCP--KGSPKRDKFLEKGG----------KVQVPYLVDPNTGVQM   63 (77)
T ss_pred             ceEecCCCCch------HHHHHHHHHHcCCcEEEEECC--CChHHHHHHHHhCC----------CCcccEEEeCCCCeEE
Confidence            56899999999      999999999999999999997  45555677776554          348999865  34555


Q ss_pred             ec
Q psy3969          82 GV   83 (86)
Q Consensus        82 Gg   83 (86)
                      .+
T Consensus        64 ~e   65 (77)
T cd03041          64 FE   65 (77)
T ss_pred             Ec
Confidence            43

GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.

>cd03040 GST_N_mPGES2 GST_N family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2

Probab=98.38  E-value=2.2e-06  Score=51.77  Aligned_cols=54  Identities=19%  Similarity=0.145  Sum_probs=42.7

Q ss_pred             CcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeC
Q psy3969           3 KPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNE   77 (86)
Q Consensus         3 ~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFig   77 (86)
                      |+.+|.+..|++      |.+|+.+|..+||+|++++++    +..+.++ +..+          ..+||.++.+
T Consensus         1 ~i~Ly~~~~~p~------c~kv~~~L~~~gi~y~~~~~~----~~~~~~~-~~~~----------~~~vP~l~~~   54 (77)
T cd03040           1 KITLYQYKTCPF------CCKVRAFLDYHGIPYEVVEVN----PVSRKEI-KWSS----------YKKVPILRVE   54 (77)
T ss_pred             CEEEEEcCCCHH------HHHHHHHHHHCCCceEEEECC----chhHHHH-HHhC----------CCccCEEEEC
Confidence            578999999998      999999999999999999986    3334444 3333          3489999977

Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated, and a C-terminal soluble domain with a GST-like structure.

>cd03037 GST_N_GRX2 GST_N family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E

Probab=98.29  E-value=3.2e-06  Score=50.43  Aligned_cols=60  Identities=12%  Similarity=-0.006  Sum_probs=45.9

Q ss_pred             EEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeC-Ceeeec
Q psy3969           5 YKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNE-EDYCGV   83 (86)
Q Consensus         5 ~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFig-d~yiGg   83 (86)
                      .+|.+..|.+      |.+++.+|..+||+|+.+.+.  ..+.. . ..+.++          ..+||.++.+ |..+++
T Consensus         2 ~Ly~~~~~p~------~~rvr~~L~~~gl~~~~~~~~--~~~~~-~-~~~~~~----------~~~vP~L~~~~~~~l~e   61 (71)
T cd03037           2 KLYIYEHCPF------CVKARMIAGLKNIPVEQIILQ--NDDEA-T-PIRMIG----------AKQVPILEKDDGSFMAE   61 (71)
T ss_pred             ceEecCCCcH------hHHHHHHHHHcCCCeEEEECC--CCchH-H-HHHhcC----------CCccCEEEeCCCeEeeh
Confidence            4789999999      999999999999999999987  33322 2 233333          3489999987 888877


Q ss_pred             c
Q psy3969          84 F   84 (86)
Q Consensus        84 y   84 (86)
                      .
T Consensus        62 s   62 (71)
T cd03037          62 S   62 (71)
T ss_pred             H
Confidence            5

coli GRX2, an atypical GRX with a molecular mass of about 24kD, compared with other GRXs which are 9-12kD in size. GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.

>cd02977 ArsC_family Arsenate Reductase (ArsC) family; composed of TRX-fold arsenic reductases and similar proteins including the transcriptional regulator, Spx

Probab=98.27  E-value=1.2e-06  Score=56.64  Aligned_cols=46  Identities=20%  Similarity=0.220  Sum_probs=40.8

Q ss_pred             cEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcC
Q psy3969           4 PYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSK   57 (86)
Q Consensus         4 ~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g   57 (86)
                      +.||.++.|+.      |.+|+.+|+++||+|+++||.  .++..+++|.+..+
T Consensus         1 i~iY~~~~C~~------c~ka~~~L~~~~i~~~~idi~--~~~~~~~~l~~~~~   46 (105)
T cd02977           1 ITIYGNPNCST------SRKALAWLEEHGIEYEFIDYL--KEPPTKEELKELLA   46 (105)
T ss_pred             CEEEECCCCHH------HHHHHHHHHHcCCCcEEEeec--cCCCCHHHHHHHHH
Confidence            46899999999      999999999999999999998  67777777777775

ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione (GSH) via glutaredoxin (GRX), through a single catalytic cysteine. This family of predominantly bacterial enzymes is unrelated to two other families of arsenate reductases which show similarity to low-molecular-weight acid phosphatases and phosphotyrosyl phosphatases. Spx is a general regulator that exerts negative and positive control over transcription initiation by binding to the C-terminal domain of the alpha subunit of RNA polymerase.

>PRK01655 spxA transcriptional regulator Spx; Reviewed

Probab=98.20  E-value=2.7e-06  Score=58.01  Aligned_cols=46  Identities=11%  Similarity=0.061  Sum_probs=40.5

Q ss_pred             cEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcC
Q psy3969           4 PYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSK   57 (86)
Q Consensus         4 ~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g   57 (86)
                      ++||.+.-|++      |.+|+++|+++||+|+++||.  .++..+++|.+-..
T Consensus         2 i~iY~~~~C~~------C~ka~~~L~~~gi~~~~idi~--~~~~~~~eL~~~l~   47 (131)
T PRK01655          2 VTLFTSPSCTS------CRKAKAWLEEHDIPFTERNIF--SSPLTIDEIKQILR   47 (131)
T ss_pred             EEEEeCCCChH------HHHHHHHHHHcCCCcEEeecc--CChhhHHHHHHHHH
Confidence            68999999999      999999999999999999998  67877777766553

>cd03036 ArsC_like Arsenate Reductase (ArsC) family, unknown subfamily; uncharacterized proteins containing a CXXC motif with similarity to thioredoxin (TRX)-fold arsenic reductases, ArsC

Probab=98.16  E-value=3.1e-06  Score=55.96  Aligned_cols=45  Identities=22%  Similarity=0.199  Sum_probs=37.9

Q ss_pred             cEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhc
Q psy3969           4 PYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNS   56 (86)
Q Consensus         4 ~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~   56 (86)
                      +.||..+.|++      |.+|+++|+++||+|+++||.  .++..++++.+-.
T Consensus         1 i~iY~~~~C~~------c~ka~~~L~~~~i~~~~idi~--~~~~~~~el~~~~   45 (111)
T cd03036           1 LKFYEYPKCST------CRKAKKWLDEHGVDYTAIDIV--EEPPSKEELKKWL   45 (111)
T ss_pred             CEEEECCCCHH------HHHHHHHHHHcCCceEEeccc--CCcccHHHHHHHH
Confidence            46899999999      999999999999999999997  5676666655433

Proteins containing a redox active CXXC motif like TRX and glutaredoxin (GRX) function as protein disulfide oxidoreductases, altering the redox state of target proteins via the reversible oxidation of the active site dithiol. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione via GRX, through a single catalytic cysteine.

>cd03060 GST_N_Omega_like GST_N family, Omega-like subfamily; composed of uncharacterized proteins with similarity to class Omega GSTs

Probab=98.14  E-value=1.3e-05  Score=47.94  Aligned_cols=60  Identities=18%  Similarity=0.043  Sum_probs=46.1

Q ss_pred             cEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeC-Ceeee
Q psy3969           4 PYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNE-EDYCG   82 (86)
Q Consensus         4 ~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFig-d~yiG   82 (86)
                      |.+|.+..|++      |.+++.+|+.+|++|+.++|+  .. ....++.+..+          ..+||-+..+ |..+.
T Consensus         1 ~~ly~~~~~p~------~~rv~~~L~~~gl~~e~~~v~--~~-~~~~~~~~~np----------~~~vP~L~~~~g~~l~   61 (71)
T cd03060           1 PILYSFRRCPY------AMRARMALLLAGITVELREVE--LK-NKPAEMLAASP----------KGTVPVLVLGNGTVIE   61 (71)
T ss_pred             CEEEecCCCcH------HHHHHHHHHHcCCCcEEEEeC--CC-CCCHHHHHHCC----------CCCCCEEEECCCcEEe
Confidence            68899999999      999999999999999999997  22 22345666543          3489999886 65553

GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. Like Omega enzymes, proteins in this subfamily contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a r

>cd03032 ArsC_Spx Arsenate Reductase (ArsC) family, Spx subfamily; Spx is a unique RNA polymerase (RNAP)-binding protein present in bacilli and some mollicutes

Probab=98.07  E-value=7.6e-06  Score=54.18  Aligned_cols=45  Identities=9%  Similarity=0.032  Sum_probs=37.4

Q ss_pred             cEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhc
Q psy3969           4 PYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNS   56 (86)
Q Consensus         4 ~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~   56 (86)
                      +.+|.+..|+.      |.+|+.+|+++||+|+.+||.  .++..++++.+-.
T Consensus         2 i~iY~~~~C~~------c~ka~~~L~~~gi~~~~idi~--~~~~~~~el~~~~   46 (115)
T cd03032           2 IKLYTSPSCSS------CRKAKQWLEEHQIPFEERNLF--KQPLTKEELKEIL   46 (115)
T ss_pred             EEEEeCCCCHH------HHHHHHHHHHCCCceEEEecC--CCcchHHHHHHHH
Confidence            67999999999      999999999999999999997  5655555555444

It inhibits transcription by binding to the C-terminal domain of the alpha subunit of RNAP, disrupting complex formation between RNAP and certain transcriptional activator proteins like ResD and ComA. In response to oxidative stress, Spx can also activate transcription, making it a general regulator that exerts both positive and negative control over transcription initiation. Spx has been shown to exert redox-sensitive transcriptional control over genes like trxA (TRX) and trxB (TRX reductase), genes that function in thiol homeostasis. This redox-sensitive activity is dependent on the presence of a CXXC motif, present in some members of the Spx subfamily, that acts as a thiol/disulfide switch. Spx has also been shown to repress genes in a sulfate-dependent manner independent of the presence of the CXXC motif.

>TIGR01617 arsC_related transcriptional regulator, Spx/MgsR family

Probab=98.05  E-value=1e-05  Score=53.65  Aligned_cols=45  Identities=16%  Similarity=0.133  Sum_probs=39.1

Q ss_pred             cEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhc
Q psy3969           4 PYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNS   56 (86)
Q Consensus         4 ~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~   56 (86)
                      +.+|.++.|+.      |.+|+++|+++||+|+++|+.  .++..++++.+..
T Consensus         1 i~iY~~~~C~~------c~ka~~~L~~~~i~~~~idi~--~~~~~~~el~~l~   45 (117)
T TIGR01617         1 IKVYGSPNCTT------CKKARRWLEANGIEYQFIDIG--EDGPTREELLDIL   45 (117)
T ss_pred             CEEEeCCCCHH------HHHHHHHHHHcCCceEEEecC--CChhhHHHHHHHH
Confidence            46899999999      999999999999999999998  6777777776544

This model represents a portion of the proteins within the larger set covered by Pfam model pfam03960. That larger family includes a glutaredoxin-dependent arsenate reductase (TIGR00014). Characterized members of this family include Spx and MgsR from Bacillus subtili. Spx is a global regulator for response to thiol-specific oxidative stress. It interacts with RNA polymerase. MgsR (modulator of the general stress response, also called YqgZ) provides a second level of regulation for more than a third of the proteins in the B. subtilis general stress regulon controlled by Sigma-B.

>cd03051 GST_N_GTT2_like GST_N family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S

Probab=97.95  E-value=5.4e-05  Score=44.39  Aligned_cols=62  Identities=13%  Similarity=0.109  Sum_probs=45.1

Q ss_pred             EEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEe-CCeeee
Q psy3969           5 YKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFN-EEDYCG   82 (86)
Q Consensus         5 ~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFi-gd~yiG   82 (86)
                      .+|.+..|++      |.+++.+|..+||+|+.+.|+...+.....++.+..+          ...+|-+.. ||..+.
T Consensus         2 ~Ly~~~~s~~------~~~~~~~L~~~~l~~~~~~v~~~~~~~~~~~~~~~~p----------~~~vP~l~~~~~~~l~   64 (74)
T cd03051           2 KLYDSPTAPN------PRRVRIFLAEKGIDVPLVTVDLAAGEQRSPEFLAKNP----------AGTVPVLELDDGTVIT   64 (74)
T ss_pred             EEEeCCCCcc------hHHHHHHHHHcCCCceEEEeecccCccCCHHHHhhCC----------CCCCCEEEeCCCCEEe
Confidence            5788888999      9999999999999999988862122233455666554          237999986 554443

cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensitivity to heat shock.

>cd03055 GST_N_Omega GST_N family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress

Probab=97.90  E-value=5.8e-05  Score=47.44  Aligned_cols=62  Identities=19%  Similarity=0.157  Sum_probs=46.9

Q ss_pred             CcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeC-Ceee
Q psy3969           3 KPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNE-EDYC   81 (86)
Q Consensus         3 ~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFig-d~yi   81 (86)
                      .+.+|....|++      |.+++.+|..+||+|+.+++.  ... ..+++.+.++          ...+|.++.+ |..+
T Consensus        18 ~~~Ly~~~~sp~------~~kv~~~L~~~gl~~~~~~v~--~~~-~~~~~~~~np----------~~~vPvL~~~~g~~l   78 (89)
T cd03055          18 IIRLYSMRFCPY------AQRARLVLAAKNIPHEVININ--LKD-KPDWFLEKNP----------QGKVPALEIDEGKVV   78 (89)
T ss_pred             cEEEEeCCCCch------HHHHHHHHHHcCCCCeEEEeC--CCC-CcHHHHhhCC----------CCCcCEEEECCCCEE
Confidence            357888888999      999999999999999999997  222 2344655543          2379999987 6665


Q ss_pred             ec
Q psy3969          82 GV   83 (86)
Q Consensus        82 Gg   83 (86)
                      ..
T Consensus        79 ~e   80 (89)
T cd03055          79 YE   80 (89)
T ss_pred             EC
Confidence            43

The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a redox active residue capable of reducing GSH mixed disulfides in a monothiol mechanism. Polymorphisms of the class Omega

>PRK13344 spxA transcriptional regulator Spx; Reviewed

Probab=97.87  E-value=2.2e-05  Score=53.80  Aligned_cols=48  Identities=10%  Similarity=0.103  Sum_probs=37.7

Q ss_pred             cEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEcc-CCCCHhHHHHHHHhcC
Q psy3969           4 PYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDIT-EPGKENEKEFMQQNSK   57 (86)
Q Consensus         4 ~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~-~~~d~~~r~~M~~~~g   57 (86)
                      +.||...-|+.      |.+|+.+|+++||+|+++|+. +|-+.+....+.+++|
T Consensus         2 i~iY~~~~C~~------crkA~~~L~~~~i~~~~~d~~~~~~s~~eL~~~l~~~~   50 (132)
T PRK13344          2 IKIYTISSCTS------CKKAKTWLNAHQLSYKEQNLGKEPLTKEEILAILTKTE   50 (132)
T ss_pred             EEEEeCCCCHH------HHHHHHHHHHcCCCeEEEECCCCCCCHHHHHHHHHHhC
Confidence            67999999999      999999999999999999995 3344444455555554

>PRK12559 transcriptional regulator Spx; Provisional

Probab=97.83  E-value=3.1e-05  Score=53.04  Aligned_cols=44  Identities=14%  Similarity=0.138  Sum_probs=35.7

Q ss_pred             cEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHh
Q psy3969           4 PYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQN   55 (86)
Q Consensus         4 ~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~   55 (86)
                      +.||.+.-|++      |.+|+.+|+++||+|+++|+.  .+|-.++++.+-
T Consensus         2 i~iY~~~~C~~------crkA~~~L~~~gi~~~~~di~--~~~~s~~el~~~   45 (131)
T PRK12559          2 VVLYTTASCAS------CRKAKAWLEENQIDYTEKNIV--SNSMTVDELKSI   45 (131)
T ss_pred             EEEEeCCCChH------HHHHHHHHHHcCCCeEEEEee--CCcCCHHHHHHH
Confidence            67999999999      999999999999999999996  444444444433

>cd03056 GST_N_4 GST_N family, unknown subfamily 4; composed of uncharacterized bacterial proteins with similarity to GSTs

Probab=97.82  E-value=0.00018  Score=42.24  Aligned_cols=63  Identities=13%  Similarity=0.047  Sum_probs=46.5

Q ss_pred             EEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeeeec
Q psy3969           5 YKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCGV   83 (86)
Q Consensus         5 ~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yiGg   83 (86)
                      .+|+.-.|++      |.+++.+|+.+|++|++++|+....+....++.+...          ..++|-+..+|..+..
T Consensus         2 ~Ly~~~~~~~------~~~v~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~p----------~~~vP~l~~~~~~i~e   64 (73)
T cd03056           2 KLYGFPLSGN------CYKVRLLLALLGIPYEWVEVDILKGETRTPEFLALNP----------NGEVPVLELDGRVLAE   64 (73)
T ss_pred             EEEeCCCCcc------HHHHHHHHHHcCCCcEEEEecCCCcccCCHHHHHhCC----------CCCCCEEEECCEEEEc
Confidence            5788888888      9999999999999999999862122334455665443          3379999988876643

GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.

>cd03035 ArsC_Yffb Arsenate Reductase (ArsC) family, Yffb subfamily; Yffb is an uncharacterized bacterial protein encoded by the yffb gene, related to the thioredoxin-fold arsenic reductases, ArsC

Probab=97.76  E-value=8.4e-05  Score=49.02  Aligned_cols=46  Identities=11%  Similarity=0.019  Sum_probs=35.1

Q ss_pred             cEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEcc-CCCCHhHHHHHHHh
Q psy3969           4 PYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDIT-EPGKENEKEFMQQN   55 (86)
Q Consensus         4 ~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~-~~~d~~~r~~M~~~   55 (86)
                      +.+|..+.|+.      |.+|+.+|+++||+|+++|+. +|-+.+....+.+.
T Consensus         1 i~iy~~~~C~~------crka~~~L~~~~i~~~~~di~~~p~s~~eL~~~l~~   47 (105)
T cd03035           1 ITLYGIKNCDT------VKKARKWLEARGVAYTFHDYRKDGLDAATLERWLAK   47 (105)
T ss_pred             CEEEeCCCCHH------HHHHHHHHHHcCCCeEEEecccCCCCHHHHHHHHHH
Confidence            46899999998      999999999999999999995 23333444444443

The structure of Yffb and the conservation of the catalytic cysteine suggest that it is likely to function as a glutathione (GSH)-dependent thiol reductase. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from GSH via glutaredoxin, through a single catalytic cysteine.

>cd03059 GST_N_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E

Probab=97.74  E-value=0.00021  Score=42.13  Aligned_cols=59  Identities=15%  Similarity=0.152  Sum_probs=43.0

Q ss_pred             EEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeeee
Q psy3969           5 YKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCG   82 (86)
Q Consensus         5 ~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yiG   82 (86)
                      .+|.+..|.+      |++++.+|+.+||+|++++++  ... ...++.+..+          ...+|.+..||.-+.
T Consensus         2 ~ly~~~~~~~------~~~v~~~l~~~gi~~~~~~v~--~~~-~~~~~~~~~p----------~~~vP~l~~~~~~l~   60 (73)
T cd03059           2 TLYSGPDDVY------SHRVRIVLAEKGVSVEIIDVD--PDN-PPEDLAELNP----------YGTVPTLVDRDLVLY   60 (73)
T ss_pred             EEEECCCChh------HHHHHHHHHHcCCccEEEEcC--CCC-CCHHHHhhCC----------CCCCCEEEECCEEEE
Confidence            5788888888      999999999999999999886  221 2234444432          237999888776543

coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal TRX-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.

>PRK10026 arsenate reductase; Provisional

Probab=97.70  E-value=0.0001  Score=51.63  Aligned_cols=51  Identities=16%  Similarity=0.190  Sum_probs=41.0

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEcc-CCCCHhHHHHHHHhcC
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDIT-EPGKENEKEFMQQNSK   57 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~-~~~d~~~r~~M~~~~g   57 (86)
                      |+.+.||....|+.      |.+|+.+|+++||+|+++|+- +|-+.+....+.+++|
T Consensus         1 m~~i~iY~~p~Cst------~RKA~~wL~~~gi~~~~~d~~~~ppt~~eL~~~l~~~g   52 (141)
T PRK10026          1 MSNITIYHNPACGT------SRNTLEMIRNSGTEPTIIHYLETPPTRDELVKLIADMG   52 (141)
T ss_pred             CCEEEEEeCCCCHH------HHHHHHHHHHCCCCcEEEeeeCCCcCHHHHHHHHHhCC
Confidence            78899999999999      999999999999999999994 3334455555555554

>cd03045 GST_N_Delta_Epsilon GST_N family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress

Probab=97.68  E-value=0.00031  Score=41.61  Aligned_cols=61  Identities=8%  Similarity=-0.020  Sum_probs=45.3

Q ss_pred             EEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeee
Q psy3969           5 YKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYC   81 (86)
Q Consensus         5 ~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yi   81 (86)
                      .+|++..|++      |.+++.+|+.+||+|+.++|+-...+..+.++.+...          ...||-+..+|..+
T Consensus         2 ~Ly~~~~~~~------~~~v~~~l~~~gi~~e~~~i~~~~~~~~~~~~~~~~p----------~~~vP~l~~~~~~l   62 (74)
T cd03045           2 DLYYLPGSPP------CRAVLLTAKALGLELNLKEVNLMKGEHLKPEFLKLNP----------QHTVPTLVDNGFVL   62 (74)
T ss_pred             EEEeCCCCCc------HHHHHHHHHHcCCCCEEEEecCccCCcCCHHHHhhCc----------CCCCCEEEECCEEE
Confidence            5888999999      9999999999999999988862123334456665443          33799998777554

GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites that are easily excreted. They are also implicated in protection against cellular damage by oxidative stress.

>COG4545 Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]

Probab=97.61  E-value=0.00012  Score=47.66  Aligned_cols=71  Identities=20%  Similarity=0.303  Sum_probs=49.7

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcC-CCCCCCCCCCCCCCCeEEeCC
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSK-ATPSDSTVKSNPLPPQIFNEE   78 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g-~~~~~~~~~~~~tvPQIFigd   78 (86)
                      |+||.+|.|-.|+-      |.-|+..|++.+|+|+.++|+. +-+..++++.-|-. ++=-....++..-.|-+-.+|
T Consensus         1 mskp~lfgsn~Cpd------ca~a~eyl~rl~v~yd~VeIt~-Sm~NlKrFl~lRDs~~~Fd~vk~~gyiGIPall~~d   72 (85)
T COG4545           1 MSKPKLFGSNLCPD------CAPAVEYLERLNVDYDFVEITE-SMANLKRFLHLRDSRPEFDEVKSNGYIGIPALLTDD   72 (85)
T ss_pred             CCCceeeccccCcc------hHHHHHHHHHcCCCceeeehhh-hhhhHHHHHhhhccchhHHhhhhcCcccceEEEeCC
Confidence            89999999999999      9999999999999999999983 45555665543321 000011123555667766554

>cd03033 ArsC_15kD Arsenate Reductase (ArsC) family, 15kD protein subfamily; composed of proteins of unknown function with similarity to thioredoxin-fold arsenic reductases, ArsC

Probab=97.57  E-value=0.00011  Score=49.14  Aligned_cols=33  Identities=12%  Similarity=0.054  Sum_probs=30.5

Q ss_pred             CcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEcc
Q psy3969           3 KPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDIT   41 (86)
Q Consensus         3 ~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~   41 (86)
                      ++.||....|+.      |.+|+.+|+++||+|+++|+.
T Consensus         1 ~i~iy~~p~C~~------crkA~~~L~~~gi~~~~~d~~   33 (113)
T cd03033           1 DIIFYEKPGCAN------NARQKALLEAAGHEVEVRDLL   33 (113)
T ss_pred             CEEEEECCCCHH------HHHHHHHHHHcCCCcEEeehh
Confidence            467999999999      999999999999999999995

It is encoded by an ORF present in a gene cluster associated with nitrogen fixation that also encodes dinitrogenase reductase ADP-ribosyltransferase (DRAT) and dinitrogenase reductase activating glycohydrolase (DRAG). ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione via glutaredoxin, through a single catalytic cysteine.

>COG1393 ArsC Arsenate reductase and related proteins, glutaredoxin family [Inorganic ion transport and metabolism]

Probab=97.56  E-value=0.00023  Score=48.26  Aligned_cols=48  Identities=21%  Similarity=0.234  Sum_probs=38.2

Q ss_pred             cEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEcc-CCCCHhHHHHHHHhcC
Q psy3969           4 PYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDIT-EPGKENEKEFMQQNSK   57 (86)
Q Consensus         4 ~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~-~~~d~~~r~~M~~~~g   57 (86)
                      ++||.+..|+.      |..|+..|+++||+|+++|+. +|-+.+....+.+.+|
T Consensus         3 itiy~~p~C~t------~rka~~~L~~~gi~~~~~~y~~~~~s~~eL~~~l~~~g   51 (117)
T COG1393           3 ITIYGNPNCST------CRKALAWLEEHGIEYTFIDYLKTPPSREELKKILSKLG   51 (117)
T ss_pred             EEEEeCCCChH------HHHHHHHHHHcCCCcEEEEeecCCCCHHHHHHHHHHcC
Confidence            68999999999      999999999999999999995 3344455555555554

>cd03034 ArsC_ArsC Arsenate Reductase (ArsC) family, ArsC subfamily; arsenic reductases similar to that encoded by arsC on the R733 plasmid of Escherichia coli

Probab=97.53  E-value=0.0003  Score=46.57  Aligned_cols=48  Identities=13%  Similarity=0.132  Sum_probs=39.5

Q ss_pred             cEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEcc-CCCCHhHHHHHHHhcC
Q psy3969           4 PYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDIT-EPGKENEKEFMQQNSK   57 (86)
Q Consensus         4 ~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~-~~~d~~~r~~M~~~~g   57 (86)
                      +.+|..+.|+.      |.+|+.+|+++||+|+++|+. +|-+.+....+.+.+|
T Consensus         1 i~iy~~~~C~t------~rkA~~~L~~~~i~~~~~di~~~~~t~~el~~~l~~~~   49 (112)
T cd03034           1 ITIYHNPRCSK------SRNALALLEEAGIEPEIVEYLKTPPTAAELRELLAKLG   49 (112)
T ss_pred             CEEEECCCCHH------HHHHHHHHHHCCCCeEEEecccCCcCHHHHHHHHHHcC
Confidence            46899999999      999999999999999999994 3445666667777665

E. coli ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], the first step in the detoxification of arsenic, using reducing equivalents derived from glutathione (GSH) via glutaredoxin (GRX). ArsC contains a single catalytic cysteine, within a thioredoxin fold, that forms a covalent thiolate-As(V) intermediate, which is reduced by GRX through a mixed GSH-arsenate intermediate. This family of predominantly bacterial enzymes is unrelated to two other families of arsenate reductases which show similarity to low-molecular-weight acid phosphatases and phosphotyrosyl phosphatases.

>TIGR00411 redox_disulf_1 small redox-active disulfide protein 1

Probab=97.49  E-value=0.00059  Score=40.84  Aligned_cols=56  Identities=9%  Similarity=0.058  Sum_probs=41.3

Q ss_pred             CCcEEEEEcccCchhchHHHHHHHHHHHh------CCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEE
Q psy3969           2 KKPYKISNTVRGVKGVKKRQQRVLMILDS------KNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIF   75 (86)
Q Consensus         2 ~~~~~y~ss~sgn~~vK~~q~~a~~lL~~------k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIF   75 (86)
                      +++++|+++-|+.      |..++.+|+.      ..+.+..||+.  .+++..    ++.|  -        ..+|.++
T Consensus         1 ~~v~~f~~~~C~~------C~~~~~~l~~l~~~~~~~~~~~~vd~~--~~~~~~----~~~~--v--------~~vPt~~   58 (82)
T TIGR00411         1 VKIELFTSPTCPY------CPAAKRVVEEVAKEMGDAVEVEYINVM--ENPQKA----MEYG--I--------MAVPAIV   58 (82)
T ss_pred             CEEEEEECCCCcc------hHHHHHHHHHHHHHhcCceEEEEEeCc--cCHHHH----HHcC--C--------ccCCEEE
Confidence            4689999999999      9988888763      23778888887  555433    3344  2        2689999


Q ss_pred             eCCe
Q psy3969          76 NEED   79 (86)
Q Consensus        76 igd~   79 (86)
                      ++|+
T Consensus        59 ~~g~   62 (82)
T TIGR00411        59 INGD   62 (82)
T ss_pred             ECCE
Confidence            9886

This protein is homologous to a family of proteins that includes thioredoxins, glutaredoxins, protein-disulfide isomerases, and others, some of which have several such domains. The sequence of this protein at the redox-active disufide site, CPYC, matches glutaredoxins rather than thioredoxins, although its overall sequence seems closer to thioredoxins. It is suggested to be a ribonucleotide-reducing system component distinct from thioredoxin or glutaredoxin.

>cd03042 GST_N_Zeta GST_N family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress

Probab=97.45  E-value=0.00088  Score=39.32  Aligned_cols=62  Identities=16%  Similarity=0.112  Sum_probs=44.1

Q ss_pred             EEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeeee
Q psy3969           5 YKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCG   82 (86)
Q Consensus         5 ~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yiG   82 (86)
                      .+|....|++      +.+++.+|..+||+|+.+.++.........++.+...          ...+|.+..+|..+.
T Consensus         2 ~L~~~~~~~~------~~~~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~~~~p----------~~~vP~l~~~~~~l~   63 (73)
T cd03042           2 ILYSYFRSSA------SYRVRIALNLKGLDYEYVPVNLLKGEQLSPAYRALNP----------QGLVPTLVIDGLVLT   63 (73)
T ss_pred             EEecCCCCcc------hHHHHHHHHHcCCCCeEEEecCccCCcCChHHHHhCC----------CCCCCEEEECCEEEE
Confidence            4677777777      8899999999999999988862122233455665443          348999988877664

The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates but display modest GSH peroxidase activity. They are also implicated in the detoxification of the carcinogen dichloroacetic acid by catalyzing its dechlorination to glyoxylic acid.

>TIGR00014 arsC arsenate reductase (glutaredoxin)

Probab=97.45  E-value=0.00045  Score=45.92  Aligned_cols=48  Identities=19%  Similarity=0.198  Sum_probs=38.3

Q ss_pred             cEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEcc-CCCCHhHHHHHHHhcC
Q psy3969           4 PYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDIT-EPGKENEKEFMQQNSK   57 (86)
Q Consensus         4 ~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~-~~~d~~~r~~M~~~~g   57 (86)
                      +.+|....|+.      |.+|+.+|+++||+|+++|+. .|-+.+...++.+.+|
T Consensus         1 i~iy~~~~C~t------~rkA~~~L~~~~i~~~~~di~~~p~t~~el~~~l~~~g   49 (114)
T TIGR00014         1 VTIYHNPRCSK------SRNTLALLEDKGIEPEVVKYLKNPPTKSELEAIFAKLG   49 (114)
T ss_pred             CEEEECCCCHH------HHHHHHHHHHCCCCeEEEeccCCCcCHHHHHHHHHHcC
Confidence            46888888988      999999999999999999994 3445555666666665

composed of two polypeptides, the products of the arsA and arsB genes. The pump alone produces resistance to arsenite and antimonite. This protein, ArsC, catalyzes the reduction of arsenate to arsenite, and thus extends resistance to include arsenate.

>PF13417 GST_N_3: Glutathione S-transferase, N-terminal domain; PDB: 3ERG_B 3IBH_A 3ERF_A 3UBL_A 3UBK_A 3IR4_A 3M8N_B 2R4V_A 2PER_A 2R5G_A

Probab=97.43  E-value=0.00044  Score=41.83  Aligned_cols=60  Identities=12%  Similarity=0.149  Sum_probs=47.5

Q ss_pred             EEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeeeecc
Q psy3969           6 KISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCGVF   84 (86)
Q Consensus         6 ~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yiGgy   84 (86)
                      +|...-|.+      |++|+.+|+.+||+|+.++++  .. +.+.+..+..+          ..+||-+-.||..+.+.
T Consensus         1 Ly~~~~Sp~------~~kv~~~l~~~~i~~~~~~v~--~~-~~~~~~~~~~p----------~~~vPvL~~~g~~l~dS   60 (75)
T PF13417_consen    1 LYGFPGSPY------SQKVRLALEEKGIPYELVPVD--PE-EKRPEFLKLNP----------KGKVPVLVDDGEVLTDS   60 (75)
T ss_dssp             EEEETTSHH------HHHHHHHHHHHTEEEEEEEEB--TT-STSHHHHHHST----------TSBSSEEEETTEEEESH
T ss_pred             CCCcCCChH------HHHHHHHHHHcCCeEEEeccC--cc-cchhHHHhhcc----------cccceEEEECCEEEeCH
Confidence            577888888      999999999999999999998  22 22566666664          23899999998877653

...

>PRK10853 putative reductase; Provisional

Probab=97.27  E-value=0.00069  Score=45.68  Aligned_cols=48  Identities=10%  Similarity=-0.001  Sum_probs=36.4

Q ss_pred             cEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEcc-CCCCHhHHHHHHHhcC
Q psy3969           4 PYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDIT-EPGKENEKEFMQQNSK   57 (86)
Q Consensus         4 ~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~-~~~d~~~r~~M~~~~g   57 (86)
                      +.+|-..-|+.      |.+|+.+|+++||+|+.+|+- +|-+.+....+.+..|
T Consensus         2 i~iy~~~~C~t------~rkA~~~L~~~~i~~~~~d~~k~p~s~~eL~~~l~~~g   50 (118)
T PRK10853          2 VTLYGIKNCDT------IKKARRWLEAQGIDYRFHDYRVDGLDSELLQGFIDELG   50 (118)
T ss_pred             EEEEcCCCCHH------HHHHHHHHHHcCCCcEEeehccCCcCHHHHHHHHHHcC
Confidence            67898889998      999999999999999999994 2334444444444433

>cd03054 GST_N_Metaxin GST_N family, Metaxin subfamily; composed of metaxins and related proteins

Probab=97.21  E-value=0.0011  Score=39.52  Aligned_cols=44  Identities=16%  Similarity=0.012  Sum_probs=35.6

Q ss_pred             HHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeeeecc
Q psy3969          21 QQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCGVF   84 (86)
Q Consensus        21 q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yiGgy   84 (86)
                      |.+++.+|+.+||+|+.++++  ...        .+          +...+|.+..+|..+.++
T Consensus        19 ~~~v~~~L~~~~i~~~~~~~~--~~~--------~~----------p~g~vP~l~~~g~~l~es   62 (72)
T cd03054          19 CLKVETYLRMAGIPYEVVFSS--NPW--------RS----------PTGKLPFLELNGEKIADS   62 (72)
T ss_pred             HHHHHHHHHhCCCceEEEecC--Ccc--------cC----------CCcccCEEEECCEEEcCH
Confidence            999999999999999999997  221        22          233899999999888765

Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities.

>cd03052 GST_N_GDAP1 GST_N family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells

Probab=97.20  E-value=0.0028  Score=38.59  Aligned_cols=62  Identities=13%  Similarity=0.164  Sum_probs=43.9

Q ss_pred             EEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeeee
Q psy3969           5 YKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCG   82 (86)
Q Consensus         5 ~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yiG   82 (86)
                      .+|++..|.+      |++++.+|..+|++|+.+.++....+....+..+...          ..+||-+..||.-+.
T Consensus         2 ~ly~~~~s~~------s~rv~~~L~e~gl~~e~~~v~~~~~~~~~~~~~~inP----------~g~vP~L~~~g~~l~   63 (73)
T cd03052           2 VLYHWTQSFS------SQKVRLVIAEKGLRCEEYDVSLPLSEHNEPWFMRLNP----------TGEVPVLIHGDNIIC   63 (73)
T ss_pred             EEecCCCCcc------HHHHHHHHHHcCCCCEEEEecCCcCccCCHHHHHhCc----------CCCCCEEEECCEEEE
Confidence            5788888888      8999999999999999988862112222234554443          348999987776554

More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal TRX-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.

>TIGR02182 GRXB Glutaredoxin, GrxB family

Probab=97.04  E-value=0.0024  Score=45.48  Aligned_cols=59  Identities=12%  Similarity=-0.037  Sum_probs=43.0

Q ss_pred             EEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEE-eCCeeeecc
Q psy3969           6 KISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIF-NEEDYCGVF   84 (86)
Q Consensus         6 ~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIF-igd~yiGgy   84 (86)
                      +|....|.+      |.+++.+|..+|++|+.+++.  .++. ... .+..          +..+||.+. .||..+++.
T Consensus         2 Ly~~~~sp~------~~kvr~~L~~~gl~~e~~~~~--~~~~-~~~-~~~n----------p~g~vP~l~~~~g~~l~es   61 (209)
T TIGR02182         2 LYIYDHCPF------CVRARMIFGLKNIPVEKHVLL--NDDE-ETP-IRMI----------GAKQVPILQKDDGRAMPES   61 (209)
T ss_pred             eecCCCCCh------HHHHHHHHHHcCCCeEEEECC--CCcc-hhH-HHhc----------CCCCcceEEeeCCeEeccH
Confidence            678888898      999999999999999999986  3322 222 2222          234899997 777777653

This model includes the highly abundant E. coli GrxB (Grx2) glutaredoxin which is notably longer than either GrxA or GrxC. Unlike the other two E. coli glutaredoxins, GrxB appears to be unable to reduce ribonucleotide reductase, and may have more to do with resistance to redox stress.

>cd03053 GST_N_Phi GST_N family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins

Probab=96.99  E-value=0.0059  Score=36.26  Aligned_cols=62  Identities=15%  Similarity=0.148  Sum_probs=42.8

Q ss_pred             EEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeeee
Q psy3969           5 YKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCG   82 (86)
Q Consensus         5 ~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yiG   82 (86)
                      .+|....|.+      |.+++.+|..+|++|+.+.++....+....+..+..          +...+|-+..+|..+.
T Consensus         3 ~Ly~~~~s~~------s~~v~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~----------P~~~vP~l~~~g~~l~   64 (76)
T cd03053           3 KLYGAAMSTC------VRRVLLCLEEKGVDYELVPVDLTKGEHKSPEHLARN----------PFGQIPALEDGDLKLF   64 (76)
T ss_pred             EEEeCCCChh------HHHHHHHHHHcCCCcEEEEeCccccccCCHHHHhhC----------CCCCCCEEEECCEEEE
Confidence            5777777887      999999999999999998886211122223344433          2347999987776553

GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Phi GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes are highly reactive toward chloroacetanilide and thiocarbamate herbicides. Some Phi GSTs have other functions including t

>PRK10387 glutaredoxin 2; Provisional

Probab=96.98  E-value=0.0031  Score=43.80  Aligned_cols=59  Identities=14%  Similarity=0.074  Sum_probs=43.0

Q ss_pred             EEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeE-EeCCeeeec
Q psy3969           5 YKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQI-FNEEDYCGV   83 (86)
Q Consensus         5 ~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQI-Figd~yiGg   83 (86)
                      .+|....|++      |.+++.+|+.+||+|+.+++.  ..+. +.. .+..          +..+||-| .-||..+.+
T Consensus         2 ~Ly~~~~sp~------~~kv~~~L~~~gi~y~~~~~~--~~~~-~~~-~~~~----------p~~~VPvL~~~~g~~l~e   61 (210)
T PRK10387          2 KLYIYDHCPF------CVKARMIFGLKNIPVELIVLA--NDDE-ATP-IRMI----------GQKQVPILQKDDGSYMPE   61 (210)
T ss_pred             EEEeCCCCch------HHHHHHHHHHcCCCeEEEEcC--CCch-hhH-HHhc----------CCcccceEEecCCeEecC
Confidence            5888889999      999999999999999999986  3322 211 2222          23489998 567776654

>cd03039 GST_N_Sigma_like GST_N family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi and Alpha

Probab=96.96  E-value=0.0054  Score=36.35  Aligned_cols=60  Identities=13%  Similarity=0.109  Sum_probs=41.8

Q ss_pred             EEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeeee
Q psy3969           5 YKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCG   82 (86)
Q Consensus         5 ~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yiG   82 (86)
                      .+|+.-.+++      |++++.+|+.+||+|+.+.++  .......+... .         ++...+|-+..+|..+.
T Consensus         2 ~Ly~~~~~~~------~~~v~~~l~~~gi~~e~~~~~--~~~~~~~~~~~-~---------~p~~~vP~L~~~~~~l~   61 (72)
T cd03039           2 KLTYFNIRGR------GEPIRLLLADAGVEYEDVRIT--YEEWPELDLKP-T---------LPFGQLPVLEIDGKKLT   61 (72)
T ss_pred             EEEEEcCcch------HHHHHHHHHHCCCCcEEEEeC--HHHhhhhhhcc-C---------CcCCCCCEEEECCEEEE
Confidence            5777777777      999999999999999999986  22111111111 1         34568999988876654

GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition of platelet aggregation, bronchoconstriction, vasodilation and mediation of allergy and inflammation. Other class Sigma

>TIGR01616 nitro_assoc nitrogenase-associated protein

Probab=96.96  E-value=0.0025  Score=43.58  Aligned_cols=47  Identities=19%  Similarity=0.056  Sum_probs=35.4

Q ss_pred             cEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEcc-CCCCHhHHHHHHHhc
Q psy3969           4 PYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDIT-EPGKENEKEFMQQNS   56 (86)
Q Consensus         4 ~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~-~~~d~~~r~~M~~~~   56 (86)
                      +.+|-..-|+.      |.+|+.+|+++||+|+.+|+- +|-+.+....+.++.
T Consensus         3 i~iY~~p~Cst------~RKA~~~L~~~gi~~~~~d~~~~p~t~~eL~~~l~~~   50 (126)
T TIGR01616         3 IIFYEKPGCAN------NARQKAALKASGHDVEVQDILKEPWHADTLRPYFGNK   50 (126)
T ss_pred             EEEEeCCCCHH------HHHHHHHHHHCCCCcEEEeccCCCcCHHHHHHHHHHc
Confidence            45788888888      999999999999999999993 334445554444443

This model describes a small family of uncharacterized proteins found so far in alpha and gamma proteobacteria and in Nostoc sp. PCC 7120, a cyanobacterium. The gene for this protein is associated with nitrogenase genes. This family shows sequence similarity to TIGR00014, a glutaredoxin-dependent arsenate reductase that converts arsentate to arsenite for disposal. This family is one of several included in Pfam model pfam03960.

>cd03076 GST_N_Pi GST_N family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress

Probab=96.89  E-value=0.0091  Score=35.88  Aligned_cols=59  Identities=15%  Similarity=0.079  Sum_probs=43.1

Q ss_pred             EEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeeee
Q psy3969           5 YKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCG   82 (86)
Q Consensus         5 ~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yiG   82 (86)
                      .+|+...+|+      +.++..+|..+||+|+.+.++  . +....++....          +..++|-+..||.-+.
T Consensus         3 ~Ly~~~~~~~------~~~v~~~L~~~~i~~e~~~v~--~-~~~~~~~~~~~----------p~~~vP~l~~~~~~l~   61 (73)
T cd03076           3 TLTYFPVRGR------AEAIRLLLADQGISWEEERVT--Y-EEWQESLKPKM----------LFGQLPCFKDGDLTLV   61 (73)
T ss_pred             EEEEeCCcch------HHHHHHHHHHcCCCCEEEEec--H-HHhhhhhhccC----------CCCCCCEEEECCEEEE
Confidence            5788888888      999999999999999999997  2 22222333322          3458999988876554

The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an increase in JNK activity, thereby promoting apoptosis. GSTP1 is expressed in various tumors and is the predominant GST in a w

>PF03960 ArsC: ArsC family; InterPro: IPR006660 Several bacterial taxon have a chromosomal resistance system, encoded by the ars operon, for the detoxification of arsenate, arsenite, and antimonite []

Probab=96.88  E-value=0.0019  Score=42.22  Aligned_cols=45  Identities=20%  Similarity=0.267  Sum_probs=30.3

Q ss_pred             EEEcccCchhchHHHHHHHHHHHhCCCceEEEEccC-CCCHhHHHHHHHhcC
Q psy3969           7 ISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITE-PGKENEKEFMQQNSK   57 (86)
Q Consensus         7 y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~-~~d~~~r~~M~~~~g   57 (86)
                      |..+-|+.      |.+|+.+|+++||+|+.+|+.. |-+.+...+|.+..|
T Consensus         1 Y~~~~C~t------~rka~~~L~~~gi~~~~~d~~k~p~s~~el~~~l~~~~   46 (110)
T PF03960_consen    1 YGNPNCST------CRKALKWLEENGIEYEFIDYKKEPLSREELRELLSKLG   46 (110)
T ss_dssp             EE-TT-HH------HHHHHHHHHHTT--EEEEETTTS---HHHHHHHHHHHT
T ss_pred             CcCCCCHH------HHHHHHHHHHcCCCeEeehhhhCCCCHHHHHHHHHHhc
Confidence            55666666      9999999999999999999962 335566666667665

This system transports arsenite and antimonite out of the cell. The pump is composed of two polypeptides, the products of the arsA and arsB genes. This two-subunit enzyme produces resistance to arsenite and antimonite. Arsenate, however, must first be reduced to arsenite before it is extruded. A third gene, arsC, expands the substrate specificity to allow for arsenate pumping and resistance. ArsC is an approximately 150-residue arsenate reductase that uses reduced glutathione (GSH) to convert arsenate to arsenite with a redox active cysteine residue in the active site. ArsC forms an active quaternary complex with GSH, arsenate, and glutaredoxin 1 (Grx1). The three ligands must be present simultaneously for reduction to occur []. The arsC family also comprises the Spx proteins which are GRAM-positive bacterial transcription factors that regulate the transcription of multiple genes in response to disulphide stress []. The arsC protein structure has been solved []. It belongs to the thioredoxin superfamily fold which is defined by a beta-sheet core surrounded by alpha-helices. The active cysteine residue of ArsC is located in the loop between the first beta-strand and the first helix, which is also conserved in the Spx protein and its homologues.; PDB: 2KOK_A 1SK1_A 1SK2_A 1JZW_A 1J9B_A 1S3C_A 1SD8_A 1SD9_A 1I9D_A 1SK0_A ....

>PF05768 DUF836: Glutaredoxin-like domain (DUF836); InterPro: IPR008554 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors

Probab=96.80  E-value=0.012  Score=36.60  Aligned_cols=53  Identities=9%  Similarity=0.036  Sum_probs=41.3

Q ss_pred             CcEEEEEcccCchhchHHHHHHHHHHHh----CCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCC
Q psy3969           3 KPYKISNTVRGVKGVKKRQQRVLMILDS----KNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEE   78 (86)
Q Consensus         3 ~~~~y~ss~sgn~~vK~~q~~a~~lL~~----k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd   78 (86)
                      ++++|...-|+-      |..|+.+|..    .+++++.|||+  .|++    +.++-+           ..+|.+++++
T Consensus         1 ~l~l~~k~~C~L------C~~a~~~L~~~~~~~~~~l~~vDI~--~d~~----l~~~Y~-----------~~IPVl~~~~   57 (81)
T PF05768_consen    1 TLTLYTKPGCHL------CDEAKEILEEVAAEFPFELEEVDID--EDPE----LFEKYG-----------YRIPVLHIDG   57 (81)
T ss_dssp             -EEEEE-SSSHH------HHHHHHHHHHCCTTSTCEEEEEETT--TTHH----HHHHSC-----------TSTSEEEETT
T ss_pred             CEEEEcCCCCCh------HHHHHHHHHHHHhhcCceEEEEECC--CCHH----HHHHhc-----------CCCCEEEEcC
Confidence            457788888888      9999999994    55789999999  7777    445665           2699999999

Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. This family contains several viral glutaredoxins, and many related bacterial and eukaryotic proteins of unknown function. The best characterised member of this family is G4L (P68460 from SWISSPROT) from Vaccinia virus (strain Western Reserve/WR) (VACV), which is necessary for virion morphogenesis and virus replication []. This is a cytomplasmic protein which functions as a shuttle in a redox pathway between membrane-associated E10R and L1R or F9L []. ; PDB: 1TTZ_A 1XPV_A 2FGX_A 2G2Q_C 1WJK_A.

>cd03049 GST_N_3 GST_N family, unknown subfamily 3; composed of uncharacterized bacterial proteins with similarity to GSTs

Probab=96.67  E-value=0.01  Score=35.10  Aligned_cols=59  Identities=7%  Similarity=-0.036  Sum_probs=41.5

Q ss_pred             EEEEEcccCchhchHHHHHHHHHHHh--CCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEe-CCeee
Q psy3969           5 YKISNTVRGVKGVKKRQQRVLMILDS--KNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFN-EEDYC   81 (86)
Q Consensus         5 ~~y~ss~sgn~~vK~~q~~a~~lL~~--k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFi-gd~yi   81 (86)
                      .+|....|.+      |.+++.+|..  +|++|+.+.++  . .....++.+..+          ..++|.+.. ||..+
T Consensus         2 ~Ly~~~~s~~------~~~~~~~l~~~~~~i~~~~~~~~--~-~~~~~~~~~~~p----------~~~vP~l~~~~g~~l   62 (73)
T cd03049           2 KLLYSPTSPY------VRKVRVAAHETGLGDDVELVLVN--P-WSDDESLLAVNP----------LGKIPALVLDDGEAL   62 (73)
T ss_pred             EEecCCCCcH------HHHHHHHHHHhCCCCCcEEEEcC--c-ccCChHHHHhCC----------CCCCCEEEECCCCEE
Confidence            5788888888      9999999999  89999999986  2 122234444332          347998874 55554


Q ss_pred             e
Q psy3969          82 G   82 (86)
Q Consensus        82 G   82 (86)
                      .
T Consensus        63 ~   63 (73)
T cd03049          63 F   63 (73)
T ss_pred             E
Confidence            3

GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.

>cd03050 GST_N_Theta GST_N family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase

Probab=96.67  E-value=0.014  Score=34.95  Aligned_cols=61  Identities=11%  Similarity=0.040  Sum_probs=42.2

Q ss_pred             EEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeee
Q psy3969           5 YKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYC   81 (86)
Q Consensus         5 ~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yi   81 (86)
                      .+|.+..|.+      |.++..+|..+|++|+.+.++....+....++.+..          +...+|-+-.+|.-+
T Consensus         2 ~ly~~~~s~~------~~~v~~~l~~~g~~~~~~~v~~~~~~~~~~~~~~~~----------p~~~vP~L~~~~~~l   62 (76)
T cd03050           2 KLYYDLMSQP------SRAVYIFLKLNKIPFEECPIDLRKGEQLTPEFKKIN----------PFGKVPAIVDGDFTL   62 (76)
T ss_pred             EEeeCCCChh------HHHHHHHHHHcCCCcEEEEecCCCCCcCCHHHHHhC----------cCCCCCEEEECCEEE
Confidence            5788888888      999999999999999998886212222233455443          234789887766543

GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenation of dihalomethanes. This is an essential process in methylotrophic bacteria to enable them to use chloromethane and DC

>cd01659 TRX_superfamily Thioredoxin (TRX) superfamily; a large, diverse group of proteins containing a TRX-fold

Probab=96.67  E-value=0.01  Score=31.09  Aligned_cols=55  Identities=9%  Similarity=0.052  Sum_probs=39.5

Q ss_pred             EEEEEcccCchhchHHHHHHHHHHH-----hCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCC
Q psy3969           5 YKISNTVRGVKGVKKRQQRVLMILD-----SKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEE   78 (86)
Q Consensus         5 ~~y~ss~sgn~~vK~~q~~a~~lL~-----~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd   78 (86)
                      .+|+++-|+.      |.++...|+     ..++.+..+|++  ..++....+.. .+          ...+|.+|+.+
T Consensus         2 ~~~~~~~c~~------c~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~----------~~~~P~~~~~~   61 (69)
T cd01659           2 VLFYAPWCPF------CQALRPVLAELALLNKGVKFEAVDVD--EDPALEKELKR-YG----------VGGVPTLVVFG   61 (69)
T ss_pred             EEEECCCChh------HHhhhhHHHHHHhhCCCcEEEEEEcC--CChHHhhHHHh-CC----------CccccEEEEEe
Confidence            4677777766      999999999     789999999998  55555544222 22          23678888775

Many members contain a classic TRX domain with a redox active CXXC motif. They function as protein disulfide oxidoreductases (PDOs), altering the redox state of target proteins via the reversible oxidation of their active site dithiol. The PDO members of this superfamily include TRX, protein disulfide isomerase (PDI), tlpA-like, glutaredoxin, NrdH redoxin, and the bacterial Dsb (DsbA, DsbC, DsbG, DsbE, DsbDgamma) protein families. Members of the superfamily that do not function as PDOs but contain a TRX-fold domain include phosducins, peroxiredoxins and glutathione (GSH) peroxidases, SCO proteins, GSH transferases (GST, N-terminal domain), arsenic reductases, TRX-like ferredoxins and calsequestrin, among others.

>cd03077 GST_N_Alpha GST_N family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress

Probab=96.66  E-value=0.017  Score=35.40  Aligned_cols=62  Identities=15%  Similarity=0.112  Sum_probs=42.5

Q ss_pred             CcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeee
Q psy3969           3 KPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYC   81 (86)
Q Consensus         3 ~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yi   81 (86)
                      ||.+|+...||+      +.++..+|...|++|+.+.++  ..++ ..++... .  .     .+...||-+-.||..+
T Consensus         1 ~~~Ly~~~~~~~------~~~v~~~l~~~gi~~e~~~v~--~~~~-~~~~~~~-~--~-----~~~g~vP~L~~~g~~l   62 (79)
T cd03077           1 KPVLHYFNGRGR------MESIRWLLAAAGVEFEEKFIE--SAED-LEKLKKD-G--S-----LMFQQVPMVEIDGMKL   62 (79)
T ss_pred             CCEEEEeCCCCh------HHHHHHHHHHcCCCcEEEEec--cHHH-HHhhccc-c--C-----CCCCCCCEEEECCEEE
Confidence            688999999998      899999999999999998886  3221 1111111 0  0     1233789887777544

The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Alpha subfamily is composed of eukaryotic GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GSTA3-3 catalyzes the isomerization of intermediates in steroid hormone biosynthesis. GSTA4-4 preferentially catalyzes the

>cd03026 AhpF_NTD_C TRX-GRX-like family, Alkyl hydroperoxide reductase F subunit (AhpF) N-terminal domain (NTD) subfamily, C-terminal TRX-fold subdomain; AhpF is a homodimeric flavoenzyme which catalyzes the NADH-dependent reduction of the peroxiredoxin AhpC, which then reduces hydrogen peroxide and organic hydroperoxides

Probab=96.52  E-value=0.0057  Score=39.00  Aligned_cols=58  Identities=19%  Similarity=0.110  Sum_probs=40.9

Q ss_pred             CcEEEEEcccCchhchHHHHHHHHHHHhC-----CCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeC
Q psy3969           3 KPYKISNTVRGVKGVKKRQQRVLMILDSK-----NIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNE   77 (86)
Q Consensus         3 ~~~~y~ss~sgn~~vK~~q~~a~~lL~~k-----~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFig   77 (86)
                      ++.+|++..|++      |..+.++|+..     +|.|..+|++  ..++..    ++.|  -.        .+|-+++|
T Consensus        15 ~i~~F~~~~C~~------C~~~~~~~~~l~~~~~~i~~~~vd~~--~~~e~a----~~~~--V~--------~vPt~vid   72 (89)
T cd03026          15 NFETYVSLSCHN------CPDVVQALNLMAVLNPNIEHEMIDGA--LFQDEV----EERG--IM--------SVPAIFLN   72 (89)
T ss_pred             EEEEEECCCCCC------cHHHHHHHHHHHHHCCCceEEEEEhH--hCHHHH----HHcC--Cc--------cCCEEEEC
Confidence            467899999999      87777776553     7999999998  444332    2333  11        57888998


Q ss_pred             Ceeee
Q psy3969          78 EDYCG   82 (86)
Q Consensus        78 d~yiG   82 (86)
                      |+-.+
T Consensus        73 G~~~~   77 (89)
T cd03026          73 GELFG   77 (89)
T ss_pred             CEEEE
Confidence            77553

AhpF contains an NTD containing two contiguous TRX-fold subdomains similar to Pyrococcus furiosus protein disulfide oxidoreductase (PfPDO). It also contains a catalytic core similar to TRX reductase containing FAD and NADH binding domains with an active site disulfide. The proposed mechanism of action of AhpF is similar to a TRX/TRX reductase system. The flow of reducing equivalents goes from NADH - catalytic core of AhpF - NTD of AhpF - AhpC - peroxide substrates. The catalytic CXXC motif of the NTD of AhpF is contained in its C-terminal TRX subdomain.

>cd03048 GST_N_Ure2p_like GST_N family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs

Probab=96.50  E-value=0.021  Score=34.48  Aligned_cols=56  Identities=14%  Similarity=0.162  Sum_probs=39.2

Q ss_pred             EEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeC
Q psy3969           5 YKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNE   77 (86)
Q Consensus         5 ~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFig   77 (86)
                      .+|... +++      |.+++.+|+.+||+|+.+.+.-...+..+.++.+...          ..+||-+..+
T Consensus         3 ~Ly~~~-~~~------~~~v~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~p----------~~~vP~l~~~   58 (81)
T cd03048           3 TLYTHG-TPN------GFKVSIMLEELGLPYEIHPVDISKGEQKKPEFLKINP----------NGRIPAIVDH   58 (81)
T ss_pred             EEEeCC-CCC------hHHHHHHHHHcCCCcEEEEecCcCCcccCHHHHHhCc----------CCCCCEEEeC
Confidence            466555 377      9999999999999999877752122344466666553          3479998876

Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The N-terminal TRX-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. Characterized GSTs in this subfamily include Aspergillus fumigatus GSTs 1 and 2, and

>PF13192 Thioredoxin_3: Thioredoxin domain; PDB: 1ZYP_B 1ZYN_A 1HYU_A 1ILO_A 1J08_F 2YWM_B 2AYT_B 2HLS_B 1A8L_A 2K8S_B

Probab=96.34  E-value=0.029  Score=34.30  Aligned_cols=58  Identities=14%  Similarity=-0.013  Sum_probs=38.3

Q ss_pred             CcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCee
Q psy3969           3 KPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDY   80 (86)
Q Consensus         3 ~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~y   80 (86)
                      ++++ +++.|.+..  .-.+.++.++...+++++.+|+.   +   .+++ ++.|  -.        .+|-+++||+.
T Consensus         2 ~I~v-~~~~C~~C~--~~~~~~~~~~~~~~i~~ei~~~~---~---~~~~-~~yg--v~--------~vPalvIng~~   59 (76)
T PF13192_consen    2 KIKV-FSPGCPYCP--ELVQLLKEAAEELGIEVEIIDIE---D---FEEI-EKYG--VM--------SVPALVINGKV   59 (76)
T ss_dssp             EEEE-ECSSCTTHH--HHHHHHHHHHHHTTEEEEEEETT---T---HHHH-HHTT---S--------SSSEEEETTEE
T ss_pred             EEEE-eCCCCCCcH--HHHHHHHHHHHhcCCeEEEEEcc---C---HHHH-HHcC--CC--------CCCEEEECCEE
Confidence            4677 677789833  22334555677789999999986   2   2334 4444  22        79999999984

...

>cd03047 GST_N_2 GST_N family, unknown subfamily 2; composed of uncharacterized bacterial proteins with similarity to GSTs

Probab=96.29  E-value=0.041  Score=32.63  Aligned_cols=62  Identities=16%  Similarity=0.019  Sum_probs=43.6

Q ss_pred             EEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeeee
Q psy3969           5 YKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCG   82 (86)
Q Consensus         5 ~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yiG   82 (86)
                      .+|.+..|.+      +.++..+|+.+|++|+.+++.....+....++.+...          ...+|-+-.||.-+.
T Consensus         2 ~l~~~~~s~~------~~~v~~~L~~~~l~~~~~~~~~~~~~~~~~~~~~~nP----------~~~vP~L~~~~~~l~   63 (73)
T cd03047           2 TIWGRRSSIN------VQKVLWLLDELGLPYERIDAGGQFGGLDTPEFLAMNP----------NGRVPVLEDGDFVLW   63 (73)
T ss_pred             EEEecCCCcc------hHHHHHHHHHcCCCCEEEEeccccccccCHHHHhhCC----------CCCCCEEEECCEEEE
Confidence            5788888888      8999999999999999988862112233455555442          347999877765543

GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The sequence from Burkholderia cepacia was identified as part of a gene cluster involved in the degradation of 2,4,5-trichlorophenoxyacetic acid. Some GSTs (e.g. Class Zeta and Delta) are known to catalyze dechlorination reactions.

>cd03061 GST_N_CLIC GST_N family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin and similar proteins

Probab=96.10  E-value=0.018  Score=37.50  Aligned_cols=66  Identities=15%  Similarity=0.124  Sum_probs=43.8

Q ss_pred             cEEEEEcccCchh--chHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeee
Q psy3969           4 PYKISNTVRGVKG--VKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYC   81 (86)
Q Consensus         4 ~~~y~ss~sgn~~--vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yi   81 (86)
                      +++|+...++...  .=--|+|++..|..|||+|+.++|+....|   ++..+...          ...||-+..+|..+
T Consensus         6 ~el~vka~~~~~~~g~cpf~~rvrl~L~eKgi~ye~~~vd~~~~p---~~~~~~nP----------~g~vPvL~~~~~~i   72 (91)
T cd03061           6 IELFVKASSDGESIGNCPFCQRLFMVLWLKGVVFNVTTVDMKRKP---EDLKDLAP----------GTQPPFLLYNGEVK   72 (91)
T ss_pred             EEEEEEeccCCCCCCCChhHHHHHHHHHHCCCceEEEEeCCCCCC---HHHHHhCC----------CCCCCEEEECCEEe
Confidence            5677765554333  334689999999999999999988632333   33445442          23799887777665


Q ss_pred             e
Q psy3969          82 G   82 (86)
Q Consensus        82 G   82 (86)
                      .
T Consensus        73 ~   73 (91)
T cd03061          73 T   73 (91)
T ss_pred             c
Confidence            4

They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division and apoptosis. They can exist in both water-soluble and membrane-bound states, and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and it adopts a fold similar to GSTs, containing an N-terminal domain with a TRX fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. The CLI

>cd03046 GST_N_GTT1_like GST_N family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S

Probab=96.00  E-value=0.054  Score=31.87  Aligned_cols=61  Identities=11%  Similarity=0.060  Sum_probs=39.8

Q ss_pred             EEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeeee
Q psy3969           5 YKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCG   82 (86)
Q Consensus         5 ~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yiG   82 (86)
                      .+|++. .++      +.++..+|..+||+|+.+.++.........++.+..          +...+|-+..+|..+.
T Consensus         2 ~l~~~~-~~~------~~~v~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~----------p~~~vP~l~~~g~~l~   62 (76)
T cd03046           2 TLYHLP-RSR------SFRILWLLEELGLPYELVLYDRGPGEQAPPEYLAIN----------PLGKVPVLVDGDLVLT   62 (76)
T ss_pred             EEEeCC-CCC------hHHHHHHHHHcCCCcEEEEeCCCCCccCCHHHHhcC----------CCCCCCEEEECCEEEE
Confidence            356544 355      789999999999999998886211122334444433          2347999987776554

cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endoplasmic reticulum. Its expression is induced after diauxic shift and remains high throughout the stationary phase. S. pomb

>TIGR00412 redox_disulf_2 small redox-active disulfide protein 2

Probab=95.94  E-value=0.081  Score=32.33  Aligned_cols=53  Identities=17%  Similarity=0.140  Sum_probs=38.3

Q ss_pred             EEEEcccCchhchHHHHHH----HHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeee
Q psy3969           6 KISNTVRGVKGVKKRQQRV----LMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYC   81 (86)
Q Consensus         6 ~y~ss~sgn~~vK~~q~~a----~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yi   81 (86)
                      .+|++-|++      |..+    +.++++.+++++.++|+   +++.   ..+ .|  -        ..+|-|++||+-+
T Consensus         4 ~~~a~~C~~------C~~~~~~~~~~~~e~~~~~~~~~v~---~~~~---a~~-~~--v--------~~vPti~i~G~~~   60 (76)
T TIGR00412         4 QIYGTGCAN------CQMTEKNVKKAVEELGIDAEFEKVT---DMNE---ILE-AG--V--------TATPGVAVDGELV   60 (76)
T ss_pred             EEECCCCcC------HHHHHHHHHHHHHHcCCCeEEEEeC---CHHH---HHH-cC--C--------CcCCEEEECCEEE
Confidence            356799999      8888    77999999999999997   3332   222 23  2        2689999987543

This small protein is found in three archaeal species so far (Methanococcus jannaschii, Archeoglobus fulgidus, and Methanobacterium thermoautotrophicum) as well as in Anabaena PCC7120. It is homologous to thioredoxins, glutaredoxins, and protein disulfide isomerases, and shares with them a redox-active disulfide. The redox active disulfide region CXXC motif resembles neither thioredoxin nor glutaredoxin. A closely related protein found in the same three Archaea, described by redox_disulf_1, has a glutaredoxin-like CP[YH]C sequence; it has been characterized in functional assays as redox-active but unlikely to be a thioredoxin or glutaredoxin.

>cd03043 GST_N_1 GST_N family, unknown subfamily 1; composed of uncharacterized proteins, predominantly from bacteria, with similarity to GSTs

Probab=95.91  E-value=0.052  Score=32.64  Aligned_cols=61  Identities=15%  Similarity=0.108  Sum_probs=42.5

Q ss_pred             ccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeeee
Q psy3969          11 VRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCG   82 (86)
Q Consensus        11 ~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yiG   82 (86)
                      +++|.-.-..++++..+|..+||+|+.+.+.- .+.+...++.+...          ...+|-+..+|.-+.
T Consensus         3 ~~~~~~~s~~s~~v~~~L~~~gl~~e~~~v~~-~~~~~~~~~~~~nP----------~g~vP~L~~~g~~l~   63 (73)
T cd03043           3 VIGNKNYSSWSLRPWLLLKAAGIPFEEILVPL-YTPDTRARILEFSP----------TGKVPVLVDGGIVVW   63 (73)
T ss_pred             EEcCCCCCHHHHHHHHHHHHcCCCCEEEEeCC-CCccccHHHHhhCC----------CCcCCEEEECCEEEE
Confidence            45666666779999999999999999988862 22223345555442          347999988876543

GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.

>cd03038 GST_N_etherase_LigE GST_N family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor

Probab=95.88  E-value=0.023  Score=34.68  Aligned_cols=53  Identities=15%  Similarity=0.177  Sum_probs=35.5

Q ss_pred             HHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeC-Ceeeec
Q psy3969          20 RQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNE-EDYCGV   83 (86)
Q Consensus        20 ~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFig-d~yiGg   83 (86)
                      .|.+++.+|..+||+|+.+.++....+....++ . .         ++...+|-+..| |..+.+
T Consensus        18 ~~~kv~~~L~~~~i~~~~~~~~~~~~~~~~~~~-~-~---------~p~~~vP~L~~~~~~~l~e   71 (84)
T cd03038          18 NVWKTRLALNHKGLEYKTVPVEFPDIPPILGEL-T-S---------GGFYTVPVIVDGSGEVIGD   71 (84)
T ss_pred             hhHHHHHHHHhCCCCCeEEEecCCCcccccccc-c-C---------CCCceeCeEEECCCCEEeC
Confidence            399999999999999999888622222222233 2 2         234589999887 666654

This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF.

>PRK09481 sspA stringent starvation protein A; Provisional

Probab=95.74  E-value=0.032  Score=39.40  Aligned_cols=59  Identities=12%  Similarity=0.094  Sum_probs=43.0

Q ss_pred             cEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeee
Q psy3969           4 PYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYC   81 (86)
Q Consensus         4 ~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yi   81 (86)
                      ..+|....|++      |+++..+|..+||+|+.+.|+  .. ....+..+..          +..+||-+..||..+
T Consensus        11 ~~Ly~~~~s~~------~~rv~~~L~e~gl~~e~~~v~--~~-~~~~~~~~~n----------P~g~VPvL~~~g~~l   69 (211)
T PRK09481         11 MTLFSGPTDIY------SHQVRIVLAEKGVSVEIEQVE--KD-NLPQDLIDLN----------PYQSVPTLVDRELTL   69 (211)
T ss_pred             eEEeCCCCChh------HHHHHHHHHHCCCCCEEEeCC--cc-cCCHHHHHhC----------CCCCCCEEEECCEEe
Confidence            35777778888      999999999999999999997  22 1223455544          233899998877543

>cd03075 GST_N_Mu GST_N family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress

Probab=95.59  E-value=0.094  Score=32.40  Aligned_cols=67  Identities=12%  Similarity=0.049  Sum_probs=41.8

Q ss_pred             cEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhH-HHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeee
Q psy3969           4 PYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENE-KEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYC   81 (86)
Q Consensus         4 ~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~-r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yi   81 (86)
                      |.+||=-.+|+      |.++..+|..+||+|+.+.|+-...+.. ..+......  ..   ..+...||-+..||..+
T Consensus         1 ~~l~y~~~~~~------~~~~~~~l~~~gi~~e~~~v~~~~~~~~~~~~~~~~~~--~~---~~P~g~vP~L~~~g~~l   68 (82)
T cd03075           1 PTLGYWDIRGL------AQPIRLLLEYTGEKYEEKRYELGDAPDYDRSQWLNEKF--KL---GLDFPNLPYYIDGDVKL   68 (82)
T ss_pred             CEEEEeCCccc------cHHHHHHHHHcCCCcEEEEeccCCccccchHhhhccch--hc---CCcCCCCCEEEECCEEE
Confidence            56777778888      9999999999999999888862111111 122221110  00   01345899998887655

The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the most abundant GSTs in human liver, skeletal muscle and brain, and are believed to provide protection against diseases inc

>PHA02125 thioredoxin-like protein

Probab=95.52  E-value=0.058  Score=32.67  Aligned_cols=52  Identities=17%  Similarity=0.228  Sum_probs=35.0

Q ss_pred             cEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeC
Q psy3969           4 PYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNE   77 (86)
Q Consensus         4 ~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFig   77 (86)
                      +.+|+++-|+.      |.+++.+|+.  ++|+.++|+  .++.  .++.++.+  -+        .+|.+.+|
T Consensus         2 iv~f~a~wC~~------Ck~~~~~l~~--~~~~~~~vd--~~~~--~~l~~~~~--v~--------~~PT~~~g   53 (75)
T PHA02125          2 IYLFGAEWCAN------CKMVKPMLAN--VEYTYVDVD--TDEG--VELTAKHH--IR--------SLPTLVNT   53 (75)
T ss_pred             EEEEECCCCHh------HHHHHHHHHH--HhheEEeee--CCCC--HHHHHHcC--Cc--------eeCeEECC
Confidence            67899999999      9999999975  456666665  2232  23444444  22        67887754

>PRK15113 glutathione S-transferase; Provisional

Probab=95.44  E-value=0.066  Score=37.85  Aligned_cols=60  Identities=12%  Similarity=0.091  Sum_probs=41.2

Q ss_pred             EEEEEc--ccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCee
Q psy3969           5 YKISNT--VRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDY   80 (86)
Q Consensus         5 ~~y~ss--~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~y   80 (86)
                      .+|.+.  .|.+      |.++..+|..+||+|+.+.|+-...+....++.+..          +...||.+-.||.-
T Consensus         7 ~Ly~~~~~~s~~------~~rv~~~l~e~gi~~e~~~v~~~~~~~~~~~~~~~n----------P~g~VP~L~~~~~~   68 (214)
T PRK15113          7 TLYSDAHFFSPY------VMSAFVALQEKGLPFELKTVDLDAGEHLQPTYQGYS----------LTRRVPTLQHDDFE   68 (214)
T ss_pred             EEEeCCCCCCch------HHHHHHHHHHcCCCCeEEEeCCCCccccCHHHHhcC----------CCCCCCEEEECCEE
Confidence            456643  5777      899999999999999998886212222335566544          23379999877643

>cd03058 GST_N_Tau GST_N family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress

Probab=95.44  E-value=0.1  Score=30.91  Aligned_cols=60  Identities=13%  Similarity=0.132  Sum_probs=39.9

Q ss_pred             EEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeeee
Q psy3969           5 YKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCG   82 (86)
Q Consensus         5 ~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yiG   82 (86)
                      .+|.+..|.+      |.++..+|..+|++|+.+++.  .. ....+..+...  .       ...+|-+-.||.-+.
T Consensus         2 ~Ly~~~~sp~------~~~v~~~l~~~gl~~~~~~~~--~~-~~~~~~~~~~p--~-------~~~vP~l~~~~~~l~   61 (74)
T cd03058           2 KLLGAWASPF------VLRVRIALALKGVPYEYVEED--LG-NKSELLLASNP--V-------HKKIPVLLHNGKPIC   61 (74)
T ss_pred             EEEECCCCch------HHHHHHHHHHcCCCCEEEEeC--cc-cCCHHHHHhCC--C-------CCCCCEEEECCEEee
Confidence            4677777887      999999999999999999886  22 11122333221  0       137898877665443

The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropionate herbicides. In addition, Tau GSTs play important roles in intracellular signalling, biosynthesis of anthocyanin,

>cd03044 GST_N_EF1Bgamma GST_N family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis

Probab=95.22  E-value=0.081  Score=31.65  Aligned_cols=59  Identities=14%  Similarity=0.099  Sum_probs=40.2

Q ss_pred             EEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeC-Ceee
Q psy3969           6 KISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNE-EDYC   81 (86)
Q Consensus         6 ~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFig-d~yi   81 (86)
                      +|+.-.|++      +.+++-+|+.+||+|+.++|+. ..+....++.+.+          +..++|-+..+ |..+
T Consensus         3 Ly~~~~~~~------~~~~~~~l~~~gi~~~~~~v~~-~~~~~~~~~~~~n----------P~~~vP~L~~~~g~~l   62 (75)
T cd03044           3 LYTYPGNPR------SLKILAAAKYNGLDVEIVDFQP-GKENKTPEFLKKF----------PLGKVPAFEGADGFCL   62 (75)
T ss_pred             EecCCCCcc------HHHHHHHHHHcCCceEEEeccc-ccccCCHHHHHhC----------CCCCCCEEEcCCCCEE
Confidence            566666777      9999999999999999999972 1112223444444          23479998864 5444

EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal TRX-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role in prot

>cd03057 GST_N_Beta GST_N family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress

Probab=94.70  E-value=0.21  Score=29.64  Aligned_cols=47  Identities=6%  Similarity=0.087  Sum_probs=31.3

Q ss_pred             HHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeC
Q psy3969          21 QQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNE   77 (86)
Q Consensus        21 q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFig   77 (86)
                      +.+++.+|..+||+|+.+.+.....+....++.+..+          ...+|-+-.+
T Consensus        11 ~~~v~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~np----------~~~vP~l~~~   57 (77)
T cd03057          11 SLAPHIALEELGLPFELVRVDLRTKTQKGADYLAINP----------KGQVPALVLD   57 (77)
T ss_pred             hHHHHHHHHHcCCCceEEEEecccCccCCHhHHHhCC----------CCCCCEEEEC
Confidence            5678899999999999988762111223456666543          2378877665

The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site forms a covalent bond with GSH.

>PLN02395 glutathione S-transferase

Probab=94.32  E-value=0.21  Score=34.84  Aligned_cols=61  Identities=11%  Similarity=0.086  Sum_probs=40.0

Q ss_pred             cEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeee
Q psy3969           4 PYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYC   81 (86)
Q Consensus         4 ~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yi   81 (86)
                      +.+|. +.+++      .+|+.-+|..+||+|+.+.|.-...+....++.+...          ...||-+-.+|..+
T Consensus         3 ~~ly~-~~~~~------~~rv~~~L~e~gl~~e~~~v~~~~~~~~~~~~~~~nP----------~g~vP~L~~~~~~l   63 (215)
T PLN02395          3 LKVYG-PAFAS------PKRALVTLIEKGVEFETVPVDLMKGEHKQPEYLALQP----------FGVVPVIVDGDYKI   63 (215)
T ss_pred             EEEEc-CCcCc------HHHHHHHHHHcCCCceEEEeccccCCcCCHHHHhhCC----------CCCCCEEEECCEEE
Confidence            56665 45566      7999999999999999888751111122334555442          23799998777544

>TIGR03143 AhpF_homolog putative alkyl hydroperoxide reductase F subunit

Probab=94.08  E-value=0.17  Score=41.22  Aligned_cols=56  Identities=14%  Similarity=0.104  Sum_probs=39.4

Q ss_pred             CcEEEEEcccCchhchHHHHHHHH----HHHhC-CCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeC
Q psy3969           3 KPYKISNTVRGVKGVKKRQQRVLM----ILDSK-NIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNE   77 (86)
Q Consensus         3 ~~~~y~ss~sgn~~vK~~q~~a~~----lL~~k-~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFig   77 (86)
                      ++.+|+|..|.+      |-+|.+    +...+ +|+.+.||++  ..++..    ++-+  -.        .||.||+|
T Consensus       479 ~i~v~~~~~C~~------Cp~~~~~~~~~~~~~~~i~~~~i~~~--~~~~~~----~~~~--v~--------~vP~~~i~  536 (555)
T TIGR03143       479 NIKIGVSLSCTL------CPDVVLAAQRIASLNPNVEAEMIDVS--HFPDLK----DEYG--IM--------SVPAIVVD  536 (555)
T ss_pred             EEEEEECCCCCC------cHHHHHHHHHHHHhCCCceEEEEECc--ccHHHH----HhCC--ce--------ecCEEEEC
Confidence            356899999999      655544    44555 8999999998  455433    2333  22        69999999


Q ss_pred             Cee
Q psy3969          78 EDY   80 (86)
Q Consensus        78 d~y   80 (86)
                      |+.
T Consensus       537 ~~~  539 (555)
T TIGR03143       537 DQQ  539 (555)
T ss_pred             CEE
Confidence            863

This family of thioredoxin reductase homologs is found adjacent to alkylhydroperoxide reductase C subunit predominantly in cases where there is only one C subunit in the genome and that genome is lacking the F subunit partner (also a thioredcxin reductase homolog) that is usually found (TIGR03140).

>PRK15317 alkyl hydroperoxide reductase subunit F; Provisional

Probab=93.97  E-value=0.16  Score=40.84  Aligned_cols=58  Identities=21%  Similarity=0.125  Sum_probs=41.6

Q ss_pred             CcEEEEEcccCchhchHHHHHHHHHHH-----hCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeC
Q psy3969           3 KPYKISNTVRGVKGVKKRQQRVLMILD-----SKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNE   77 (86)
Q Consensus         3 ~~~~y~ss~sgn~~vK~~q~~a~~lL~-----~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFig   77 (86)
                      .+.+|+|..|.+      |-+|.+.++     .-+|.++.||.+  ..|+..+    +-+  -        -.||++|+|
T Consensus       119 ~i~~fv~~~Cp~------Cp~~v~~~~~~a~~~~~i~~~~id~~--~~~~~~~----~~~--v--------~~VP~~~i~  176 (517)
T PRK15317        119 HFETYVSLSCHN------CPDVVQALNLMAVLNPNITHTMIDGA--LFQDEVE----ARN--I--------MAVPTVFLN  176 (517)
T ss_pred             EEEEEEcCCCCC------cHHHHHHHHHHHHhCCCceEEEEEch--hCHhHHH----hcC--C--------cccCEEEEC
Confidence            356999999999      666655553     347889999998  6676544    333  2        279999999


Q ss_pred             Ceeee
Q psy3969          78 EDYCG   82 (86)
Q Consensus        78 d~yiG   82 (86)
                      ++...
T Consensus       177 ~~~~~  181 (517)
T PRK15317        177 GEEFG  181 (517)
T ss_pred             CcEEE
Confidence            97553

>PTZ00057 glutathione s-transferase; Provisional

Probab=93.91  E-value=0.4  Score=33.70  Aligned_cols=64  Identities=14%  Similarity=0.089  Sum_probs=42.9

Q ss_pred             CcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHh--HHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCee
Q psy3969           3 KPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKEN--EKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDY   80 (86)
Q Consensus         3 ~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~--~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~y   80 (86)
                      ++.+|+--.+|+      +.++..+|+.+||+|+.+.+.. ..++  ..+++....        .++...||-+..||..
T Consensus         4 ~~~L~y~~~~~~------~~~vrl~L~~~gi~ye~~~~~~-~~~~~~~~~~~~~~~--------~nP~g~vP~L~~~~~~   68 (205)
T PTZ00057          4 EIVLYYFDARGK------AELIRLIFAYLGIEYTDKRFGE-NGDAFIEFKNFKKEK--------DTPFEQVPILEMDNII   68 (205)
T ss_pred             ceEEEecCCCcc------hHHHHHHHHHcCCCeEEEeccc-cchHHHHHHhccccC--------CCCCCCCCEEEECCEE
Confidence            356787777888      8899999999999999998852 1111  111111100        1356689999998865


Q ss_pred             e
Q psy3969          81 C   81 (86)
Q Consensus        81 i   81 (86)
                      +
T Consensus        69 l   69 (205)
T PTZ00057         69 F   69 (205)
T ss_pred             E
Confidence            4

>cd03080 GST_N_Metaxin_like GST_N family, Metaxin subfamily, Metaxin-like proteins; a heterogenous group of proteins, predominantly uncharacterized, with similarity to metaxins and GSTs

Probab=93.91  E-value=0.21  Score=29.89  Aligned_cols=44  Identities=16%  Similarity=-0.077  Sum_probs=34.1

Q ss_pred             HHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeeeecc
Q psy3969          21 QQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCGVF   84 (86)
Q Consensus        21 q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yiGgy   84 (86)
                      |.+++.+|..+|++|+.+.+.  ..        ..+          +...+|-+-.||+.+.+.
T Consensus        20 ~~~v~~~L~~~gi~~~~~~~~--~~--------~~~----------p~g~vPvl~~~g~~l~eS   63 (75)
T cd03080          20 CLKVETFLRMAGIPYENKFGG--LA--------KRS----------PKGKLPFIELNGEKIADS   63 (75)
T ss_pred             HHHHHHHHHHCCCCcEEeecC--cc--------cCC----------CCCCCCEEEECCEEEcCH
Confidence            999999999999999998886  21        222          334799999888877653

Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. One characterized member of this subgroup is a novel GST from Rhodococcus with toluene o-monooxygenase and gamma-glutamylcysteine synthetase activities. Also members are the cadmium-inducible lysosomal protein CDR-1 and its homologs from C. elegans, and the failed axon connections (fax) protein from Drosophila. CDR-1 is an integral membrane protein that functions to protect against cadmium toxicity and may also have a role in osmoregulation to maintain salt balance in C. ele

>TIGR03140 AhpF alkyl hydroperoxide reductase, F subunit

Probab=92.95  E-value=0.076  Score=42.75  Aligned_cols=58  Identities=17%  Similarity=0.047  Sum_probs=40.9

Q ss_pred             CcEEEEEcccCchhchHHHHHHHHHHHh-----CCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeC
Q psy3969           3 KPYKISNTVRGVKGVKKRQQRVLMILDS-----KNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNE   77 (86)
Q Consensus         3 ~~~~y~ss~sgn~~vK~~q~~a~~lL~~-----k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFig   77 (86)
                      .+.+|+|..|.+      |-.|.+.+..     -+|..+.||.+  ..|+..    ++-+  .        -.||++|+|
T Consensus       120 ~i~~f~~~~Cp~------Cp~~v~~~~~~a~~~p~i~~~~id~~--~~~~~~----~~~~--v--------~~VP~~~i~  177 (515)
T TIGR03140       120 HFETYVSLTCQN------CPDVVQALNQMALLNPNISHTMIDGA--LFQDEV----EALG--I--------QGVPAVFLN  177 (515)
T ss_pred             EEEEEEeCCCCC------CHHHHHHHHHHHHhCCCceEEEEEch--hCHHHH----HhcC--C--------cccCEEEEC
Confidence            367999999999      6665555433     47888888887  566644    3333  1        279999999


Q ss_pred             Ceeee
Q psy3969          78 EDYCG   82 (86)
Q Consensus        78 d~yiG   82 (86)
                      ++..+
T Consensus       178 ~~~~~  182 (515)
T TIGR03140       178 GEEFH  182 (515)
T ss_pred             CcEEE
Confidence            97654

This enzyme is the partner of the peroxiredoxin (alkyl hydroperoxide reductase) AhpC which contains the peroxide-reactive cysteine. AhpF contains the reductant (NAD(P)H) binding domain (pfam00070) and presumably acts to resolve the disulfide which forms after oxidation of the active site cysteine in AphC. This proteins contains two paired conserved cysteine motifs, CxxCP and CxHCDGP.

>TIGR00862 O-ClC intracellular chloride channel protein

Probab=92.94  E-value=0.52  Score=35.13  Aligned_cols=67  Identities=18%  Similarity=0.165  Sum_probs=44.6

Q ss_pred             CcEEEEEcccCchhch--HHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCee
Q psy3969           3 KPYKISNTVRGVKGVK--KRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDY   80 (86)
Q Consensus         3 ~~~~y~ss~sgn~~vK--~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~y   80 (86)
                      .+++|+...+.+..+-  ..|+++...|..|||+|+.+.|+-  ... -.+..+...          ..+||-+-.||..
T Consensus         2 ~~el~~ka~~~~~~~~~cp~~~rv~i~L~ekgi~~e~~~vd~--~~~-~~~fl~inP----------~g~vPvL~~~g~~   68 (236)
T TIGR00862         2 EIELFVKAGSDGESIGNCPFSQRLFMILWLKGVVFNVTTVDL--KRK-PEDLQNLAP----------GTHPPFLTYNTEV   68 (236)
T ss_pred             ceEEEEecCCCCCcCCCCHhHHHHHHHHHHcCCCcEEEEECC--CCC-CHHHHHHCc----------CCCCCEEEECCEE
Confidence            3577877655444332  679999999999999999988862  211 234444442          3379988777765


Q ss_pred             ee
Q psy3969          81 CG   82 (86)
Q Consensus        81 iG   82 (86)
                      +.
T Consensus        69 l~   70 (236)
T TIGR00862        69 KT   70 (236)
T ss_pred             ee
Confidence            54

These proteins are thought to function in the regulation of the membrane potential and in transepithelial ion absorption and secretion in the kidney.

>PLN02473 glutathione S-transferase

Probab=92.85  E-value=0.49  Score=32.97  Aligned_cols=62  Identities=19%  Similarity=0.114  Sum_probs=40.6

Q ss_pred             cEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeee
Q psy3969           4 PYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYC   81 (86)
Q Consensus         4 ~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yi   81 (86)
                      ..+|.+..|++      +.++.-+|..+||+|+.+.+.-...+....+..+..          +...||-+..||.-+
T Consensus         3 ~kLy~~~~s~~------~~rv~~~L~e~gi~ye~~~v~~~~~~~~~~~~~~~n----------P~g~vP~L~~~g~~l   64 (214)
T PLN02473          3 VKVYGQIKAAN------PQRVLLCFLEKGIEFEVIHVDLDKLEQKKPEHLLRQ----------PFGQVPAIEDGDLKL   64 (214)
T ss_pred             eEEecCCCCCc------hHHHHHHHHHcCCCceEEEecCcccccCCHHHHhhC----------CCCCCCeEEECCEEE
Confidence            35787777888      899999999999999988764101112222333333          223799998777554

>PRK05568 flavodoxin; Provisional

Probab=92.82  E-value=0.3  Score=32.25  Aligned_cols=40  Identities=15%  Similarity=0.117  Sum_probs=29.8

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccC
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITE   42 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~   42 (86)
                      |+++.|+|.|.+||++--  .+.+..-|++.|++.+.+|+.+
T Consensus         1 m~~~~IvY~S~~GnT~~~--a~~i~~~~~~~g~~v~~~~~~~   40 (142)
T PRK05568          1 MKKINIIYWSGTGNTEAM--ANLIAEGAKENGAEVKLLNVSE   40 (142)
T ss_pred             CCeEEEEEECCCchHHHH--HHHHHHHHHHCCCeEEEEECCC
Confidence            889999999999995432  2333444567889999999973

>PRK13972 GSH-dependent disulfide bond oxidoreductase; Provisional

Probab=92.78  E-value=0.47  Score=33.34  Aligned_cols=55  Identities=15%  Similarity=0.176  Sum_probs=36.2

Q ss_pred             EEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEe
Q psy3969           5 YKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFN   76 (86)
Q Consensus         5 ~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFi   76 (86)
                      .+|++. +++      +.++.-+|..+||+|+.+.|+-...+....+..+..          +.-.||-+-.
T Consensus         3 ~Ly~~~-~~~------~~~v~~~L~e~gl~~e~~~v~~~~~~~~~~~~~~iN----------P~gkVP~L~~   57 (215)
T PRK13972          3 DLYFAP-TPN------GHKITLFLEEAELDYRLIKVDLGKGGQFRPEFLRIS----------PNNKIPAIVD   57 (215)
T ss_pred             EEEECC-CCC------hHHHHHHHHHcCCCcEEEEecCcccccCCHHHHhhC----------cCCCCCEEEe
Confidence            467654 677      889999999999999988875212222223444433          2337998875

>cd02947 TRX_family TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains

Probab=92.54  E-value=0.61  Score=26.79  Aligned_cols=36  Identities=8%  Similarity=0.193  Sum_probs=27.3

Q ss_pred             EEEEEcccCchhchHHHHHHHHHHHh-----CCCceEEEEccCCCCHhH
Q psy3969           5 YKISNTVRGVKGVKKRQQRVLMILDS-----KNIDYTVIDITEPGKENE   48 (86)
Q Consensus         5 ~~y~ss~sgn~~vK~~q~~a~~lL~~-----k~I~f~eiDI~~~~d~~~   48 (86)
                      .+|+++-|+.      |..+..+|++     .++.|-.+|++  .+++.
T Consensus        15 l~~~~~~C~~------C~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~   55 (93)
T cd02947          15 VDFWAPWCGP------CKAIAPVLEELAEEYPKVKFVKVDVD--ENPEL   55 (93)
T ss_pred             EEEECCCChh------HHHhhHHHHHHHHHCCCceEEEEECC--CChhH
Confidence            4566776777      8888888877     89999999998  44443

Group I TRX is a small ancient protein that alter the redox state of target proteins via the reversible oxidation of an active site dithiol, present in a CXXC motif, partially exposed at the protein's surface. TRX reduces protein disulfide bonds, resulting in a disulfide bond at its active site. Oxidized TRX is converted to the active form by TRX reductase, using reducing equivalents derived from either NADPH or ferredoxins. By altering their redox state, TRX regulates the functions of at least 30 target proteins, some of which are enzymes and transcription factors. It also plays an important role in the defense against oxidative stress by directly reducing hydrogen peroxide and certain radicals, and by serving as a reductant for peroxiredoxins. At least two major types of functio

>TIGR02187 GlrX_arch Glutaredoxin-like domain protein

Probab=92.11  E-value=0.51  Score=33.82  Aligned_cols=59  Identities=8%  Similarity=0.096  Sum_probs=38.8

Q ss_pred             cEEEEEcccCchhchHHHHHHHHHHHh-----CCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCC
Q psy3969           4 PYKISNTVRGVKGVKKRQQRVLMILDS-----KNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEE   78 (86)
Q Consensus         4 ~~~y~ss~sgn~~vK~~q~~a~~lL~~-----k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd   78 (86)
                      +.+|+++-|+.      |..++.+|+.     -.|.+..||+.  .+++.    .++.|  -+        .+|.|++++
T Consensus       137 I~~F~a~~C~~------C~~~~~~l~~l~~~~~~i~~~~vD~~--~~~~~----~~~~~--V~--------~vPtl~i~~  194 (215)
T TIGR02187       137 IEVFVTPTCPY------CPYAVLMAHKFALANDKILGEMIEAN--ENPDL----AEKYG--VM--------SVPKIVINK  194 (215)
T ss_pred             EEEEECCCCCC------cHHHHHHHHHHHHhcCceEEEEEeCC--CCHHH----HHHhC--Cc--------cCCEEEEec
Confidence            46689999999      7777777664     25888888887  55543    33344  22        578888764


Q ss_pred             e---eeecc
Q psy3969          79 D---YCGVF   84 (86)
Q Consensus        79 ~---yiGgy   84 (86)
                      .   +.|..
T Consensus       195 ~~~~~~G~~  203 (215)
T TIGR02187       195 GVEEFVGAY  203 (215)
T ss_pred             CCEEEECCC
Confidence            3   45543

This family of archaeal proteins contains a C-terminal domain with homology to bacterial and eukaryotic glutaredoxins, including a CPYC motif. There is an N-terminal domain which has even more distant homology to glutaredoxins. The name "glutaredoxin" may be inappropriate in the sense of working in tandem with glutathione and glutathione reductase which may not be present in the archaea. The overall domain structure appears to be related to bacterial alkylhydroperoxide reductases, but the homology may be distant enough that the function of this family is wholly different.

>cd02975 PfPDO_like_N Pyrococcus furiosus protein disulfide oxidoreductase (PfPDO)-like family, N-terminal TRX-fold subdomain; composed of proteins with similarity to PfPDO, a redox active thermostable protein believed to be the archaeal counterpart of bacterial DsbA and eukaryotic protein disulfide isomerase (PDI), which are both involved in oxidative protein folding

Probab=91.48  E-value=0.82  Score=29.75  Aligned_cols=50  Identities=8%  Similarity=0.062  Sum_probs=33.1

Q ss_pred             EEE-EEcccCchhchHHHHHHHHHHHh-----CCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEe
Q psy3969           5 YKI-SNTVRGVKGVKKRQQRVLMILDS-----KNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFN   76 (86)
Q Consensus         5 ~~y-~ss~sgn~~vK~~q~~a~~lL~~-----k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFi   76 (86)
                      .+| +++-|+.      |+.++.+|+.     .+|.|..+|++  .+++    +.++.+  -+        ++|-+++
T Consensus        26 vv~f~a~wC~~------C~~~~~~l~~la~~~~~i~~~~vd~d--~~~~----l~~~~~--v~--------~vPt~~i   81 (113)
T cd02975          26 VVFSSKEGCQY------CEVTKQLLEELSELSDKLKLEIYDFD--EDKE----KAEKYG--VE--------RVPTTIF   81 (113)
T ss_pred             EEEeCCCCCCC------hHHHHHHHHHHHHhcCceEEEEEeCC--cCHH----HHHHcC--CC--------cCCEEEE
Confidence            345 4567888      7777777754     24789999998  5553    444454  22        6888887

PfPDO contains two redox active CXXC motifs in two contiguous TRX-fold subdomains. The active site in the N-terminal TRX-fold subdomain is required for isomerase but not for reductase activity of PfPDO. The exclusive presence of PfPDO-like proteins in extremophiles may suggest that they have a special role in adaptation to extreme conditions.

>TIGR01262 maiA maleylacetoacetate isomerase

Probab=90.61  E-value=0.7  Score=31.94  Aligned_cols=60  Identities=17%  Similarity=0.123  Sum_probs=39.4

Q ss_pred             EEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhH-HHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeee
Q psy3969           6 KISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENE-KEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYC   81 (86)
Q Consensus         6 ~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~-r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yi   81 (86)
                      +|....|++      +.++..+|..+||+|+.+.++-....+. -.++.+..          +..++|-+..||..+
T Consensus         2 Ly~~~~s~~------~~~v~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~n----------P~g~vP~L~~~g~~l   62 (210)
T TIGR01262         2 LYSYWRSSC------SYRVRIALALKGIDYEYVPVNLLRDGEQRSPEFLALN----------PQGLVPTLDIDGEVL   62 (210)
T ss_pred             cccCCCCCc------hHHHHHHHHHCCCCceEEecccccccccCChhhhhcC----------CCCcCCEEEECCEEe
Confidence            454556667      8899999999999999988761001111 13344433          345899998877654

Maleylacetoacetate isomerase is an enzyme of tyrosine and phenylalanine catabolism. It requires glutathione and belongs by homology to the zeta family of glutathione S-transferases. The enzyme (EC 5.2.1.2) is described as active also on maleylpyruvate, and the example from a Ralstonia sp. catabolic plasmid is described as a maleylpyruvate isomerase involved in gentisate catabolism.

>PRK07308 flavodoxin; Validated

Probab=90.61  E-value=0.67  Score=31.05  Aligned_cols=39  Identities=18%  Similarity=0.061  Sum_probs=30.9

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEcc
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDIT   41 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~   41 (86)
                      |.|+.|.|.|.+||++  +=..++..-|...|++.+..|++
T Consensus         1 m~~~~IvY~S~tGnTe--~iA~~ia~~l~~~g~~~~~~~~~   39 (146)
T PRK07308          1 MALAKIVYASMTGNTE--EIADIVADKLRELGHDVDVDECT   39 (146)
T ss_pred             CceEEEEEECCCchHH--HHHHHHHHHHHhCCCceEEEecc
Confidence            8899999999999954  44555556678889988888886

>cd02949 TRX_NTR TRX domain, novel NADPH thioredoxin reductase (NTR) family; composed of fusion proteins found only in oxygenic photosynthetic organisms containing both TRX and NTR domains

Probab=90.17  E-value=1.4  Score=27.34  Aligned_cols=36  Identities=17%  Similarity=0.236  Sum_probs=26.5

Q ss_pred             EEEEEcccCchhchHHHHHHHHHHHh------CCCceEEEEccCCCCHhH
Q psy3969           5 YKISNTVRGVKGVKKRQQRVLMILDS------KNIDYTVIDITEPGKENE   48 (86)
Q Consensus         5 ~~y~ss~sgn~~vK~~q~~a~~lL~~------k~I~f~eiDI~~~~d~~~   48 (86)
                      .+|+++-|+.      |..+...|+.      .++.|..+|++  .+++.
T Consensus        18 v~f~a~~C~~------C~~~~~~l~~l~~~~~~~v~~~~id~d--~~~~l   59 (97)
T cd02949          18 VLYTSPTCGP------CRTLKPILNKVIDEFDGAVHFVEIDID--EDQEI   59 (97)
T ss_pred             EEEECCCChh------HHHHHHHHHHHHHHhCCceEEEEEECC--CCHHH
Confidence            4677788888      7777777765      45889999998  56653

The TRX domain functions as a protein disulfide reductase via the reversible oxidation of an active center dithiol present in a CXXC motif, while the NTR domain functions as a reductant to oxidized TRX. The fusion protein is bifunctional, showing both TRX and NTR activities, but it is not an independent NTR/TRX system. In plants, the protein is found exclusively in shoots and mature leaves and is localized in the chloroplast. It is involved in plant protection against oxidative stress.

>PF13409 GST_N_2: Glutathione S-transferase, N-terminal domain; PDB: 3C8E_B 3M1G_A 3R3E_A 3O3T_A 1RK4_A 1K0O_B 1K0N_A 3QR6_A 3SWL_A 3TGZ_B

Probab=89.93  E-value=0.74  Score=27.35  Aligned_cols=53  Identities=15%  Similarity=0.180  Sum_probs=36.5

Q ss_pred             HHHHHHHHHhCCCceEEEEccCCCCHhHH-HHHHHhcCCCCCCCCCCCCCCCCeEEe-CCeeeec
Q psy3969          21 QQRVLMILDSKNIDYTVIDITEPGKENEK-EFMQQNSKATPSDSTVKSNPLPPQIFN-EEDYCGV   83 (86)
Q Consensus        21 q~~a~~lL~~k~I~f~eiDI~~~~d~~~r-~~M~~~~g~~~~~~~~~~~~tvPQIFi-gd~yiGg   83 (86)
                      ++|+.-+|..+|++|+..-+....++..+ .++.+.++          ..+||-+.. +|..+.+
T Consensus         5 a~Rv~i~l~~~gl~~~~~~v~~~~~~~~~~~~~~~~~p----------~~~VP~L~~~~g~vi~e   59 (70)
T PF13409_consen    5 AHRVRIALEEKGLPYEIKVVPLIPKGEQKPPEFLALNP----------RGKVPVLVDPDGTVINE   59 (70)
T ss_dssp             HHHHHHHHHHHTGTCEEEEEETTTTBCTTCHBHHHHST----------T-SSSEEEETTTEEEES
T ss_pred             hHHHHHHHHHhCCCCEEEEEeeecCccccChhhhccCc----------CeEEEEEEECCCCEeeC
Confidence            78999999999999997666311233332 45666664          348999997 6776654

...

>PF06953 ArsD: Arsenical resistance operon trans-acting repressor ArsD; InterPro: IPR010712 This family consists of several bacterial arsenical resistance operon trans-acting repressor ArsD proteins

Probab=89.31  E-value=1.3  Score=30.46  Aligned_cols=69  Identities=12%  Similarity=0.051  Sum_probs=39.8

Q ss_pred             CCCcEEEEEcccCc-----hhchHH---HHHHHHHHHhCCCceEEEEccCCCCHhHHHH------HHHhcCCCCCCCCCC
Q psy3969           1 MKKPYKISNTVRGV-----KGVKKR---QQRVLMILDSKNIDYTVIDITEPGKENEKEF------MQQNSKATPSDSTVK   66 (86)
Q Consensus         1 ~~~~~~y~ss~sgn-----~~vK~~---q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~------M~~~~g~~~~~~~~~   66 (86)
                      |+|++||=...+=+     +.|.+.   -..+..-|+.+||+.+..+++  .+|.+..+      +.+..|         
T Consensus         1 M~~i~ifepamCC~tGvCG~~vd~eL~~~a~~~~~Lk~~gv~v~RyNL~--~~P~aF~~n~~V~~~L~~~G---------   69 (123)
T PF06953_consen    1 MKKIEIFEPAMCCSTGVCGPSVDPELVRFAADLDWLKEQGVEVERYNLA--QNPQAFVENPEVNQLLQTEG---------   69 (123)
T ss_dssp             --EEEEEE-S-SSTTS-SSSS--HHHHHHHHHHHHHHHTT-EEEEEETT--T-TTHHHHSHHHHHHHHHH----------
T ss_pred             CCceEEeccccccccCccCCCCCHHHHHHHHHHHHHHhCCceEEEEccc--cCHHHHHhCHHHHHHHHHcC---------
Confidence            88888986554221     233443   445667778999999999999  77776542      233333         


Q ss_pred             CCCCCCeEEeCCeee
Q psy3969          67 SNPLPPQIFNEEDYC   81 (86)
Q Consensus        67 ~~~tvPQIFigd~yi   81 (86)
                       ..-.|-+|+||+-+
T Consensus        70 -~e~LPitlVdGeiv   83 (123)
T PF06953_consen   70 -AEALPITLVDGEIV   83 (123)
T ss_dssp             -GGG-SEEEETTEEE
T ss_pred             -cccCCEEEECCEEE
Confidence             22579999999865

ArsD is a trans-acting repressor of the arsRDABC operon that confers resistance to arsenicals and antimonials in Escherichia coli. It possesses two-pairs of vicinal cysteine residues, Cys(12)-Cys(13) and Cys(112)-Cys(113), that potentially form separate binding sites for the metalloids that trigger dissociation of ArsD from the operon. However, as a homodimer it has four vicinal cysteine pairs [].; GO: 0003677 DNA binding, 0045892 negative regulation of transcription, DNA-dependent, 0046685 response to arsenic-containing substance; PDB: 3MWH_A 3KGK_A 3KTB_B.

>PRK05569 flavodoxin; Provisional

Probab=88.57  E-value=1.2  Score=29.33  Aligned_cols=39  Identities=15%  Similarity=0.041  Sum_probs=29.0

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEcc
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDIT   41 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~   41 (86)
                      |.|+.|+|.|.+||++  +=.+.+..-|.+.|++.+.+++.
T Consensus         1 m~ki~iiY~S~tGnT~--~iA~~i~~~~~~~g~~v~~~~~~   39 (141)
T PRK05569          1 MKKVSIIYWSCGGNVE--VLANTIADGAKEAGAEVTIKHVA   39 (141)
T ss_pred             CCeEEEEEECCCCHHH--HHHHHHHHHHHhCCCeEEEEECC
Confidence            8899999999999953  33444455566688888888886

>PRK10357 putative glutathione S-transferase; Provisional

Probab=88.13  E-value=1.3  Score=30.58  Aligned_cols=31  Identities=13%  Similarity=0.224  Sum_probs=26.8

Q ss_pred             EEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEcc
Q psy3969           5 YKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDIT   41 (86)
Q Consensus         5 ~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~   41 (86)
                      .+|.+..|.+      ..++..+|+.+||+|+.+.++
T Consensus         2 ~Ly~~~~s~~------~~~v~~~L~~~gv~ye~~~~~   32 (202)
T PRK10357          2 KLIGSYTSPF------VRKISILLLEKGITFEFVNEL   32 (202)
T ss_pred             eeecCCCCch------HHHHHHHHHHcCCCCeEEecC
Confidence            4677777887      889999999999999998886

>PRK06756 flavodoxin; Provisional

Probab=87.65  E-value=1.3  Score=29.70  Aligned_cols=39  Identities=21%  Similarity=0.242  Sum_probs=29.9

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEcc
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDIT   41 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~   41 (86)
                      |.|+.|+|.|.+||++--  ...+..-|+..|++.+.+|+.
T Consensus         1 mmkv~IiY~S~tGnTe~v--A~~ia~~l~~~g~~v~~~~~~   39 (148)
T PRK06756          1 MSKLVMIFASMSGNTEEM--ADHIAGVIRETENEIEVIDIM   39 (148)
T ss_pred             CceEEEEEECCCchHHHH--HHHHHHHHhhcCCeEEEeehh
Confidence            778999999999996543  344445677889998888886

>PRK09004 FMN-binding protein MioC; Provisional

Probab=86.61  E-value=1.5  Score=30.00  Aligned_cols=39  Identities=13%  Similarity=0.042  Sum_probs=29.2

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEcc
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDIT   41 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~   41 (86)
                      |+|+.|+|.|.+||.+-=-+  ++...|.+.|++.+.+|+.
T Consensus         1 M~~i~I~ygS~tGnae~~A~--~l~~~~~~~g~~~~~~~~~   39 (146)
T PRK09004          1 MADITLISGSTLGGAEYVAD--HLAEKLEEAGFSTETLHGP   39 (146)
T ss_pred             CCeEEEEEEcCchHHHHHHH--HHHHHHHHcCCceEEeccC
Confidence            89999999999999654433  3334567788888877765

>cd02953 DsbDgamma DsbD gamma family; DsbD gamma is the C-terminal periplasmic domain of the bacterial protein DsbD

Probab=86.55  E-value=3.8  Score=25.40  Aligned_cols=50  Identities=12%  Similarity=0.034  Sum_probs=27.4

Q ss_pred             EEEEEcccCchhchHHH----HHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcC
Q psy3969           5 YKISNTVRGVKGVKKRQ----QRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSK   57 (86)
Q Consensus         5 ~~y~ss~sgn~~vK~~q----~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g   57 (86)
                      ..|+++-|+..+.-...    ..+...+.. ++.|-.||++  .++....++.++.+
T Consensus        16 v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~-~~~~~~vd~~--~~~~~~~~~~~~~~   69 (104)
T cd02953          16 VDFTADWCVTCKVNEKVVFSDPEVQAALKK-DVVLLRADWT--KNDPEITALLKRFG   69 (104)
T ss_pred             EEEEcchhHHHHHHHHHhcCCHHHHHHHhC-CeEEEEEecC--CCCHHHHHHHHHcC
Confidence            35677777773332211    123344443 7888888987  44443445555554

It contains a CXXC motif in a TRX fold and shuttles the reducing potential from the membrane domain (DsbD beta) to the N-terminal periplasmic domain (DsbD alpha). DsbD beta, a transmembrane domain comprising of eight helices, acquires its reducing potential from the cytoplasmic thioredoxin. DsbD alpha transfers the acquired reducing potential from DsbD gamma to target proteins such as the periplasmic protein disulphide isomerases, DsbC and DsbG. This flow of reducing potential from the cytoplasm through DsbD allows DsbC and DsbG to act as isomerases in the oxidizing environment of the bacterial periplasm. DsbD also transfers reducing potential from the cytoplasm to specific reductases in the periplasm which are involved in the maturation of cytochromes.

>COG0716 FldA Flavodoxins [Energy production and conversion]

Probab=85.93  E-value=1.5  Score=29.79  Aligned_cols=38  Identities=18%  Similarity=0.153  Sum_probs=29.1

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEcc
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDIT   41 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~   41 (86)
                      |.|+-|||+|.+||++.-  ...+...|.+-+.+. .+++.
T Consensus         1 M~ki~Ivy~S~tGnTe~v--A~~i~~~l~~~~~~~-~~~~~   38 (151)
T COG0716           1 MMKILIVYGSRTGNTEKV--AEIIAEELGADGFEV-DIDIR   38 (151)
T ss_pred             CCeEEEEEEcCCCcHHHH--HHHHHHHhccCCceE-EEeec
Confidence            899999999999996543  566677777777666 55554

>PLN02378 glutathione S-transferase DHAR1

Probab=85.64  E-value=3.1  Score=29.41  Aligned_cols=48  Identities=21%  Similarity=0.358  Sum_probs=32.6

Q ss_pred             HHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeee
Q psy3969          21 QQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYC   81 (86)
Q Consensus        21 q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yi   81 (86)
                      |+|+..+|+.+|++|+.+.|+-...+   .+..+..          +..+||-+-.||..+
T Consensus        23 ~~rv~~~L~e~gl~~e~~~v~~~~~~---~~~l~in----------P~G~VPvL~~~~~~l   70 (213)
T PLN02378         23 SQRALLTLEEKSLTYKIHLINLSDKP---QWFLDIS----------PQGKVPVLKIDDKWV   70 (213)
T ss_pred             hHHHHHHHHHcCCCCeEEEeCcccCC---HHHHHhC----------CCCCCCEEEECCEEe
Confidence            99999999999999997777521111   1344433          334899887776543

>COG0625 Gst Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]

Probab=85.57  E-value=2.5  Score=29.49  Aligned_cols=56  Identities=9%  Similarity=0.161  Sum_probs=40.5

Q ss_pred             EEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCH-hHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCC
Q psy3969           5 YKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKE-NEKEFMQQNSKATPSDSTVKSNPLPPQIFNEE   78 (86)
Q Consensus         5 ~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~-~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd   78 (86)
                      .+|.+..|++      |.++.-+|..+||+|+.+.|+  ... ....+..+..          +...||-+=.+|
T Consensus         2 ~L~~~~~sp~------~~kv~l~l~e~g~~ye~~~v~--~~~~~~~~~~~~~n----------P~gkVPvL~~~~   58 (211)
T COG0625           2 KLYGSPTSPY------SRKVRLALEEKGLPYEIVLVD--LDAEQKPPDFLALN----------PLGKVPALVDDD   58 (211)
T ss_pred             eeecCCCCcc------hHHHHHHHHHcCCCceEEEeC--cccccCCHHHHhcC----------CCCCCCEEeeCC
Confidence            4677777788      999999999999999999997  332 3334444444          234789776554

>PRK08105 flavodoxin; Provisional

Probab=85.29  E-value=1.7  Score=29.87  Aligned_cols=39  Identities=21%  Similarity=0.131  Sum_probs=29.2

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEcc
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDIT   41 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~   41 (86)
                      |+|+.|+|.|.+||.+---+  ++...|...|++...+++.
T Consensus         1 m~~i~I~YgS~tGnte~~A~--~l~~~l~~~g~~~~~~~~~   39 (149)
T PRK08105          1 MAKVGIFVGTVYGNALLVAE--EAEAILTAQGHEVTLFEDP   39 (149)
T ss_pred             CCeEEEEEEcCchHHHHHHH--HHHHHHHhCCCceEEechh
Confidence            89999999999999664433  3345566788888777765

>TIGR00333 nrdI ribonucleoside-diphosphate reductase 2, operon protein nrdI

Probab=84.84  E-value=1.1  Score=30.64  Aligned_cols=27  Identities=11%  Similarity=0.086  Sum_probs=21.1

Q ss_pred             EEEEcccCchhchHHHHHHHHHHHhCCCceEEEEcc
Q psy3969           6 KISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDIT   41 (86)
Q Consensus         6 ~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~   41 (86)
                      |||+|.|||         .+++++..|++-..+.++
T Consensus         1 IvY~S~TGN---------te~fv~~lg~~~~~i~~~   27 (125)
T TIGR00333         1 IYFSSKTGN---------VQRFVEKLGFQHIRIPVD   27 (125)
T ss_pred             CEEEccccc---------HHHHHHHcCCCcEEeecC
Confidence            689999999         455688899886556665

Ribonucleotide reductases (RNRs) are enzymes that provide the precursors of DNA synthesis. The three characterized classes of RNRs differ by their metal cofactor and their stable organic radical. The exact function of nrdI within the ribonucleotide reductases has not yet been fully characterised.

>TIGR00147 lipid kinase, YegS/Rv2252/BmrU family

Probab=84.02  E-value=3.7  Score=30.34  Aligned_cols=41  Identities=22%  Similarity=0.246  Sum_probs=36.1

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEcc
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDIT   41 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~   41 (86)
                      |++..+++...||+..-.+...+++.+|++.++++..+-.+
T Consensus         1 ~~~~~ii~Np~sg~~~~~~~~~~i~~~l~~~~~~~~~~~t~   41 (293)
T TIGR00147         1 MAEAPAILNPTAGKSNDNKPLREVIMLLREEGMEIHVRVTW   41 (293)
T ss_pred             CceEEEEECCCccchhhHHHHHHHHHHHHHCCCEEEEEEec
Confidence            88999999999999887877888999999999999876655

The E. coli member of this family, YegS has been purified and shown to have phosphatidylglycerol kinase activity. The member from M. tuberculosis, Rv2252, has diacylglycerol kinase activity. BmrU from B. subtilis is in an operon with multidrug efflux transporter Bmr, but is uncharacterized.

>COG4837 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=83.70  E-value=6.7  Score=26.56  Aligned_cols=67  Identities=21%  Similarity=0.259  Sum_probs=49.4

Q ss_pred             EcccCchhchHHHHHHHHHHHhC----CCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeeeec
Q psy3969           9 NTVRGVKGVKKRQQRVLMILDSK----NIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCGV   83 (86)
Q Consensus         9 ss~sgn~~vK~~q~~a~~lL~~k----~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yiGg   83 (86)
                      +|+-+-+.-|.--.....+|+.|    ...|+.|||..|.+++.-..|.++.-        +.----|-|-++|++++.
T Consensus        17 ASCV~aPtsKdt~eWLeaalkRKyp~~~F~~~YiDI~n~~~e~~~~~~aekI~--------~dey~YPlivvedeiVae   87 (106)
T COG4837          17 ASCVNAPTSKDTYEWLEAALKRKYPNQPFKYTYIDITNPPLEDHDLQFAEKIE--------QDEYFYPLIVVEDEIVAE   87 (106)
T ss_pred             HHhcCCCcchhHHHHHHHHHhccCCCCCcEEEEEEcCCCccHHHHHHHHHHHh--------cccccceEEEEcceEeec
Confidence            45555556666666777777765    45678999986778888889999884        133478999999999873

>KOG0406|consensus

Probab=82.59  E-value=5.2  Score=30.30  Aligned_cols=61  Identities=15%  Similarity=0.138  Sum_probs=44.2

Q ss_pred             cEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeeee
Q psy3969           4 PYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCG   82 (86)
Q Consensus         4 ~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yiG   82 (86)
                      +.+|.+-.|.+      -+||..-|+.|||+|+.+.++-.+.++   .+.+...         ...-||-+=.+|+-++
T Consensus        10 vrL~~~w~sPf------a~R~~iaL~~KgI~yE~veedl~~Ks~---~ll~~np---------~hkKVPvL~Hn~k~i~   70 (231)
T KOG0406|consen   10 VKLLGMWFSPF------AQRVRIALKLKGIPYEYVEEDLTNKSE---WLLEKNP---------VHKKVPVLEHNGKPIC   70 (231)
T ss_pred             EEEEEeecChH------HHHHHHHHHhcCCceEEEecCCCCCCH---HHHHhcc---------ccccCCEEEECCceeh
Confidence            67888889999      899999999999999998887323333   3334332         1236898888887654

>PF02798 GST_N: Glutathione S-transferase, N-terminal domain; InterPro: IPR004045 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione

Probab=82.22  E-value=8.5  Score=23.02  Aligned_cols=52  Identities=13%  Similarity=0.171  Sum_probs=33.4

Q ss_pred             HHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCC-CCCCeEEeC-Ceee
Q psy3969          20 RQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSN-PLPPQIFNE-EDYC   81 (86)
Q Consensus        20 ~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~-~tvPQIFig-d~yi   81 (86)
                      ++.+++.+|+.+||+|+.+.++-...+....+..+...          . ..+|-+=.+ |..+
T Consensus        11 ~~~~~r~~l~~~gv~~e~~~v~~~~~~~~~~e~~~~~p----------~~g~vP~l~~~~~~~l   64 (76)
T PF02798_consen   11 RSERIRLLLAEKGVEYEDVRVDFEKGEHKSPEFLAINP----------MFGKVPALEDGDGFVL   64 (76)
T ss_dssp             TTHHHHHHHHHTT--EEEEEEETTTTGGGSHHHHHHTT----------TSSSSSEEEETTTEEE
T ss_pred             chHHHHHHHHHhcccCceEEEecccccccchhhhhccc----------ccceeeEEEECCCCEE
Confidence            48999999999999999987762134433355555442          1 268988877 5443

The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of Cephalopoda is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Soluble GSTs activate glutathione (GSH) to GS-. In many GSTs, this is accomplished by a Tyr at H-bonding distance from the sulphur of GSH. These enzymes catalyse nucleophilic attack by reduced glutathione (GSH) on nonpolar compounds that contain an electrophillic carbon, nitrogen, or sulphur atom []. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold, with each monomer composed of two distinct domains []. The N-terminal domain forms a thioredoxin-like fold that binds the glutathione moiety, while the C-terminal domain contains several hydrophobic alpha-helices that specifically bind hydrophobic substrates. This entry represents the N-terminal domain of GST.; GO: 0005515 protein binding; PDB: 2VCT_H 2WJU_B 4ACS_A 1BYE_D 1AXD_B 2VCV_P 1TDI_A 1JLV_D 1Y6E_A 1U88_B ....

>PRK06703 flavodoxin; Provisional

Probab=82.16  E-value=3.5  Score=27.60  Aligned_cols=39  Identities=13%  Similarity=0.106  Sum_probs=28.5

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEcc
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDIT   41 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~   41 (86)
                      |.++.|+|.|.+||.+---+  .+..-|...|++.+.+|+.
T Consensus         1 mmkv~IiY~S~tGnT~~iA~--~ia~~l~~~g~~v~~~~~~   39 (151)
T PRK06703          1 MAKILIAYASMSGNTEDIAD--LIKVSLDAFDHEVVLQEMD   39 (151)
T ss_pred             CCeEEEEEECCCchHHHHHH--HHHHHHHhcCCceEEEehh
Confidence            77899999999999654332  3334467888888888876

>PLN02817 glutathione dehydrogenase (ascorbate)

Probab=82.06  E-value=4.7  Score=30.29  Aligned_cols=49  Identities=24%  Similarity=0.337  Sum_probs=33.7

Q ss_pred             HHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeee
Q psy3969          20 RQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYC   81 (86)
Q Consensus        20 ~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yi   81 (86)
                      .|+++..+|+.+||+|+.+.|+-...+   .+..+.+          +...||-+-.+|..+
T Consensus        75 ~s~rV~i~L~ekgi~ye~~~vdl~~~~---~~fl~iN----------P~GkVPvL~~d~~~L  123 (265)
T PLN02817         75 FCQRVLLTLEEKHLPYDMKLVDLTNKP---EWFLKIS----------PEGKVPVVKLDEKWV  123 (265)
T ss_pred             HHHHHHHHHHHcCCCCEEEEeCcCcCC---HHHHhhC----------CCCCCCEEEECCEEE
Confidence            399999999999999998777621111   2334433          234799998887655

>PF09822 ABC_transp_aux: ABC-type uncharacterized transport system; InterPro: IPR019196 This domain is found in various eukaryotic and prokaryotic intra-flagellar transport proteins involved in gliding motility, as well as in several hypothetical proteins

Probab=81.95  E-value=3.9  Score=30.07  Aligned_cols=52  Identities=15%  Similarity=0.038  Sum_probs=37.4

Q ss_pred             CcEEEEEcccCchhchHHHHHHHHHHHhC------CCceEEEEccCCCCHhHHHHHHHhcC
Q psy3969           3 KPYKISNTVRGVKGVKKRQQRVLMILDSK------NIDYTVIDITEPGKENEKEFMQQNSK   57 (86)
Q Consensus         3 ~~~~y~ss~sgn~~vK~~q~~a~~lL~~k------~I~f~eiDI~~~~d~~~r~~M~~~~g   57 (86)
                      .+++|+|+--.. ..+....+++.||+..      +|.++.||..  .+|+..++..+..|
T Consensus        28 ~i~~~~s~~l~~-~~~~~~~~v~~lL~~y~~~s~g~i~v~~iDp~--~~~~~~~~~~~~~G   85 (271)
T PF09822_consen   28 TITVYFSRELPP-ELSPLRKQVRDLLDEYARYSPGKIKVEFIDPD--ENPSEAEEKAKEYG   85 (271)
T ss_pred             EEEEEECCCcch-hhhHHHHHHHHHHHHHHHhCCCceEEEEECCC--CChHHHHHHHHhcC
Confidence            356777762222 5677788888888875      8999999996  67777776666666

>PF07315 DUF1462: Protein of unknown function (DUF1462); InterPro: IPR009190 There are currently no experimental data for members of this group of bacterial proteins or their homologues

Probab=81.55  E-value=6.8  Score=26.12  Aligned_cols=66  Identities=12%  Similarity=0.234  Sum_probs=38.4

Q ss_pred             cccCchhchHHHHHHHHHHHh----CCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeeeec
Q psy3969          10 TVRGVKGVKKRQQRVLMILDS----KNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCGV   83 (86)
Q Consensus        10 s~sgn~~vK~~q~~a~~lL~~----k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yiGg   83 (86)
                      |+-+-+.=|.--.....+|..    ....|+.|||..|.+.+..+++.++.-.        .----|-|.++|+++|.
T Consensus        11 SCVn~PsSkeTyeWL~aal~RKyp~~~f~~~YiDi~~p~~~~~~~~~a~~I~e--------de~fYPlV~i~~eiV~E   80 (93)
T PF07315_consen   11 SCVNAPSSKETYEWLEAALKRKYPDQPFEFTYIDIENPPENDHDQQFAERILE--------DELFYPLVVINDEIVAE   80 (93)
T ss_dssp             GGSSS--HHHHHHHHHHHHHHH-TTS-EEEEEEETTT----HHHHHHHHHHHT--------TSS-SSEEEETTEEEEE
T ss_pred             hhcCCCCchhHHHHHHHHHhCcCCCCceEEEEEecCCCCccHHHHHHHHHHHh--------cccccceEEECCEEEec
Confidence            343434444444555555555    4578899999866666566667777631        22368999999999983

A crystal structure of Q7A6J8 from SWISSPROT revealed a thioredoxin-like fold, its core consisting of three layers alpha/beta/alpha.; PDB: 1XG8_A.

>PRK11914 diacylglycerol kinase; Reviewed

Probab=81.29  E-value=5  Score=30.00  Aligned_cols=53  Identities=15%  Similarity=0.241  Sum_probs=40.7

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHh
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQN   55 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~   55 (86)
                      |++..+++.-.||+-.-.+.-.++...|++.|++|..+-.+  ...++.+..++.
T Consensus         8 ~~~~~iI~NP~sG~g~~~~~~~~~~~~l~~~g~~~~~~~t~--~~~~~~~~a~~~   60 (306)
T PRK11914          8 IGKVTVLTNPLSGHGAAPHAAERAIARLHHRGVDVVEIVGT--DAHDARHLVAAA   60 (306)
T ss_pred             CceEEEEECCCCCCCcHHHHHHHHHHHHHHcCCeEEEEEeC--CHHHHHHHHHHH
Confidence            78899999999999887777888889999999999887665  333444444443

>PF00258 Flavodoxin_1: Flavodoxin; InterPro: IPR008254 This domain is found in a number of proteins including flavodoxin and nitric-oxide synthase

Probab=81.15  E-value=4  Score=26.68  Aligned_cols=35  Identities=14%  Similarity=0.307  Sum_probs=28.8

Q ss_pred             EEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccC
Q psy3969           6 KISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITE   42 (86)
Q Consensus         6 ~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~   42 (86)
                      |+|.|.+||.+  +=.+++...|.++|++.+.+|+.+
T Consensus         1 I~Y~S~tG~te--~~A~~ia~~l~~~g~~~~~~~~~~   35 (143)
T PF00258_consen    1 IVYGSMTGNTE--KMAEAIAEGLRERGVEVRVVDLDD   35 (143)
T ss_dssp             EEEETSSSHHH--HHHHHHHHHHHHTTSEEEEEEGGG
T ss_pred             CEEECCchhHH--HHHHHHHHHHHHcCCceeeechhh
Confidence            78999999976  345567778889999999999983

Flavodoxins are electron-transfer proteins that function in various electron transport systems. They bind one FMN molecule, which serves as a redox-active prosthetic group [] and are functionally interchangeable with ferredoxins. They have been isolated from prokaryotes, cyanobacteria, and some eukaryotic algae. Nitric oxide synthase (1.14.13.39 from EC) produces nitric oxide from L-arginie and NADPH. Nitric oxide acts as a messenger molecule in the body.; GO: 0010181 FMN binding, 0016491 oxidoreductase activity; PDB: 2WC1_A 2FVX_A 2FOX_A 6NUL_A 1FVX_A 2FAX_A 1FLN_A 1FLA_A 4NLL_A 2FDX_A ....

>PRK11752 putative S-transferase; Provisional

Probab=80.99  E-value=7.4  Score=28.77  Aligned_cols=57  Identities=14%  Similarity=0.100  Sum_probs=35.3

Q ss_pred             EEEEEcccCchhchHHHHHHHHHHHhC------CCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCC
Q psy3969           5 YKISNTVRGVKGVKKRQQRVLMILDSK------NIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEE   78 (86)
Q Consensus         5 ~~y~ss~sgn~~vK~~q~~a~~lL~~k------~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd   78 (86)
                      .+|+ ..|++      +.++.-+|+.+      |++|+.+.|.-...+....+..+..          +..+||-+-.+|
T Consensus        46 ~Ly~-~~s~~------~~rV~i~L~e~~~~~~~gl~ye~~~v~~~~~~~~~~e~~~iN----------P~GkVP~Lv~~d  108 (264)
T PRK11752         46 QLYS-LGTPN------GQKVTIMLEELLALGVKGAEYDAWLIRIGEGDQFSSGFVEIN----------PNSKIPALLDRS  108 (264)
T ss_pred             EEec-CCCCc------hHHHHHHHHHHHhccCCCCceEEEEecCccccccCHHHHhhC----------CCCCCCEEEeCC
Confidence            3444 55777      89999999886      8889887775101111123444433          344899997654

>PRK10629 EnvZ/OmpR regulon moderator; Provisional

Probab=80.43  E-value=3.6  Score=28.30  Aligned_cols=38  Identities=16%  Similarity=0.059  Sum_probs=31.9

Q ss_pred             CcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEcc
Q psy3969           3 KPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDIT   41 (86)
Q Consensus         3 ~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~   41 (86)
                      +|-|-+|+.++..++ .-..++.++|++.||.++.|...
T Consensus        35 dpavQIs~~~~g~~~-~~~~~v~~~L~~~gI~~ksi~~~   72 (127)
T PRK10629         35 ESTLAIRAVHQGASL-PDGFYVYQHLDANGIHIKSITPE   72 (127)
T ss_pred             CceEEEecCCCCCcc-chHHHHHHHHHHCCCCcceEEee
Confidence            577888888555666 88899999999999999988665

>PRK10542 glutathionine S-transferase; Provisional

Probab=80.33  E-value=5  Score=27.45  Aligned_cols=59  Identities=8%  Similarity=0.111  Sum_probs=34.5

Q ss_pred             EEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCH-hHHHHHHHhcCCCCCCCCCCCCCCCCeEEe-CCee
Q psy3969           5 YKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKE-NEKEFMQQNSKATPSDSTVKSNPLPPQIFN-EEDY   80 (86)
Q Consensus         5 ~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~-~~r~~M~~~~g~~~~~~~~~~~~tvPQIFi-gd~y   80 (86)
                      .+|++..| +      ..++.-+|..+||+|+.+.|+-...+ ..-.+..+..          +...||-+=. ||..
T Consensus         2 ~l~~~~~s-~------~~~~~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~~~n----------P~g~vPvL~~~~g~~   62 (201)
T PRK10542          2 KLFYKPGA-C------SLASHITLRESGLDFTLVSVDLAKKRLENGDDYLAIN----------PKGQVPALLLDDGTL   62 (201)
T ss_pred             ceeecccH-H------HHHHHHHHHHcCCCceEEEeecccccccCChHHHHhC----------cCCCCCeEEeCCCcE
Confidence            35665433 4      55677899999999998877521111 1123455544          2337898754 4433

>PRK03767 NAD(P)H:quinone oxidoreductase; Provisional

Probab=80.20  E-value=3.5  Score=29.22  Aligned_cols=39  Identities=13%  Similarity=0.079  Sum_probs=30.1

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHh-CCCceEEEEcc
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDS-KNIDYTVIDIT   41 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~-k~I~f~eiDI~   41 (86)
                      |.|+.|.|.|.+||.  ++=-+.+..-|++ .|++.+.++|.
T Consensus         1 M~kilIvy~S~~G~T--~~lA~~ia~g~~~~~G~ev~~~~l~   40 (200)
T PRK03767          1 MAKVLVLYYSMYGHI--ETMAEAVAEGAREVAGAEVTIKRVP   40 (200)
T ss_pred             CCeEEEEEcCCCCHH--HHHHHHHHHHHhhcCCcEEEEEecc
Confidence            778999999988873  4444556666676 89999999996

>cd02978 KaiB_like KaiB-like family; composed of the circadian clock proteins, KaiB and the N-terminal KaiB-like sensory domain of SasA

Probab=80.18  E-value=7.6  Score=24.48  Aligned_cols=65  Identities=17%  Similarity=0.113  Sum_probs=36.9

Q ss_pred             EEEEEcccCchhchHHHHHHHHHHHhC---CCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeC
Q psy3969           5 YKISNTVRGVKGVKKRQQRVLMILDSK---NIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNE   77 (86)
Q Consensus         5 ~~y~ss~sgn~~vK~~q~~a~~lL~~k---~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFig   77 (86)
                      .+|+++-+.+  -...-...+++++..   ..+.+.|||.  .+|+.-+.  .+.=  -.+.=+.-.+.|-|.|+|
T Consensus         5 ~Lyv~g~tp~--S~~ai~nl~~i~e~~l~~~~~LeVIDv~--~~P~lAe~--~~iv--AtPtLvk~~P~P~rrliG   72 (72)
T cd02978           5 RLYVAGRTPK--SERALQNLKRILEELLGGPYELEVIDVL--KQPQLAEE--DKIV--ATPTLVKVLPPPRRRLIG   72 (72)
T ss_pred             EEEECCCCch--HHHHHHHHHHHHHHhcCCcEEEEEEEcc--cCHhHHhh--CCEE--EechhhhcCCCCceEecC
Confidence            3566655333  344555666666664   6678999999  78886653  1111  011111224567777775

KaiB is an essential protein in maintaining circadian rhythm. It was originally discovered from the cyanobacterium Synechococcus as part of the circadian clock gene cluster, kaiABC. KaiB attenuates KaiA-enhanced KaiC autokinase activity by interacting with KaiA-KaiC complexes in a circadian fashion. KaiB is membrane-associated as well as cytosolic. The amount of membrane-associated protein peaks in the evening (at circadian time (CT) 12-16) while the cytosolic form peaks later (at CT 20). The rhythmic localization of KaiB may function in regulating the formation of Kai complexes. SasA is a sensory histidine kinase which associates with KaiC. Although it is not an essential oscillator component, it is important in enhancing kaiABC expression and is important in metabolic growth control under day/night cycle conditions. SasA contains an N-terminal sensor

>KOG4244|consensus

Probab=80.05  E-value=1.9  Score=33.66  Aligned_cols=50  Identities=18%  Similarity=0.223  Sum_probs=39.1

Q ss_pred             cccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeeeeccC
Q psy3969          10 TVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCGVFR   85 (86)
Q Consensus        10 s~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yiGgyd   85 (86)
                      +.|.+      |.++.-+|...+|+||.++=.          |..++.          +-|.|-|=.||+|+-+.|
T Consensus        59 nLSPf------ClKvEt~lR~~~IpYE~~~~~----------~~~rSr----------~G~lPFIELNGe~iaDS~  108 (281)
T KOG4244|consen   59 NLSPF------CLKVETFLRAYDIPYEIVDCS----------LKRRSR----------NGTLPFIELNGEHIADSD  108 (281)
T ss_pred             CCChH------HHHHHHHHHHhCCCceecccc----------ceeecc----------CCCcceEEeCCeeccccH
Confidence            55666      999999999999999998876          433331          128999999999997754

>PRK13337 putative lipid kinase; Reviewed

Probab=80.04  E-value=5.9  Score=29.73  Aligned_cols=54  Identities=22%  Similarity=0.214  Sum_probs=41.5

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhc
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNS   56 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~   56 (86)
                      |++..+++.-.||+..-.+.-..+...|.+.+++|+.+...  ...++.+.+++..
T Consensus         1 ~~r~~~I~Np~aG~~~~~~~~~~~~~~l~~~~~~~~~~~t~--~~~~a~~~a~~~~   54 (304)
T PRK13337          1 MKRARIIYNPTSGRELFKKNLPDVLQKLEQAGYETSAHATT--GPGDATLAAERAV   54 (304)
T ss_pred             CceEEEEECCcccchhHHHHHHHHHHHHHHcCCEEEEEEec--CCCCHHHHHHHHH
Confidence            78899999999999776666677888899999999988886  3444455455443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	86
2ct6_A	111	Solution Structure Of The Sh3 Domain-Binding Glutam		2e-08
1u6t_A	121	Crystal Structure Of The Human Sh3 Binding Glutamic		1e-05
1sj6_A	101	Nmr Structure And Regulated Expression In Apl Cell		1e-05
1wry_A	121	Solution Structure Of The Sh3 Domain-Binding Glutam		1e-05
1j0f_A	100	Solution Structure Of The Sh3 Domain Binding Glutam		2e-05
1t1v_A	93	Crystal Structure Of The Glutaredoxin-Like Protein		2e-05

>pdb|2CT6|A Chain A, Solution Structure Of The Sh3 Domain-Binding Glutamic Acid- Rich-Like Protein 2 Length = 111

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 27/70 (38%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
Query: 13 GVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPP 72
          G   +KK+QQ V+  L++  I++  +DIT    E ++++M +N    P     + NPLPP
Sbjct: 19 GFVAIKKKQQDVVRFLEANKIEFEEVDITM--SEEQRQWMYKN--VPPEKKPTQGNPLPP 74
Query: 73 QIFNEEDYCG 82
          QIFN + YCG
Sbjct: 75 QIFNGDRYCG 84

>pdb|1U6T|A Chain A, Crystal Structure Of The Human Sh3 Binding Glutamic-Rich Protein Like Length = 121

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 6/71 (8%)
Query: 13 GVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSN-PLP 71
          G   +KK+QQ VL  L++  I +   DI     E  +++M++N    P +S   +  PLP
Sbjct: 11 GSTAIKKKQQDVLGFLEANKIGFEEKDIA--ANEENRKWMREN---VPENSRPATGYPLP 65
Query: 72 PQIFNEEDYCG 82
          PQIFNE  Y G
Sbjct: 66 PQIFNESQYRG 76

>pdb|1SJ6|A Chain A, Nmr Structure And Regulated Expression In Apl Cell Of Human Sh3bgrl3 Length = 101

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 12/76 (15%)
Query: 8  SNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGK-ENEKEFMQQNSKATPSDSTVK 66
          S +V G + +K +Q  V  ILD K I Y ++DI++     +E   +  N KAT       
Sbjct: 8  STSVTGSREIKSQQSEVTRILDGKRIQYQLVDISQDNALRDEMRALAGNPKAT------- 60
Query: 67 SNPLPPQIFNEEDYCG 82
              PPQI N + YCG
Sbjct: 61 ----PPQIVNGDQYCG 72

>pdb|1WRY|A Chain A, Solution Structure Of The Sh3 Domain-Binding Glutamic Acid- Rich-Like Protein Length = 121

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 6/71 (8%)
Query: 13 GVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSN-PLP 71
          G   +KK+QQ VL  L++  I +   DI     E  +++M++N    P +S   +  PLP
Sbjct: 19 GSTAIKKKQQDVLGFLEANKIGFEEKDIA--ANEENRKWMREN---VPENSRPATGYPLP 73
Query: 72 PQIFNEEDYCG 82
          PQIFNE  Y G
Sbjct: 74 PQIFNESQYRG 84

>pdb|1J0F|A Chain A, Solution Structure Of The Sh3 Domain Binding Glutamic Acid- Rich Protein Like 3 Length = 100

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 37/76 (48%), Gaps = 12/76 (15%)
Query: 8  SNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGK-ENEKEFMQQNSKATPSDSTVK 66
          S +V G + +K +Q  V  ILD K I Y ++DI++     +E   +  N KAT       
Sbjct: 15 STSVTGSREIKSQQSEVTRILDGKRIQYQLVDISQDNALRDEMRTLAGNPKAT------- 67
Query: 67 SNPLPPQIFNEEDYCG 82
              PPQI N   YCG
Sbjct: 68 ----PPQIVNGNHYCG 79

>pdb|1T1V|A Chain A, Crystal Structure Of The Glutaredoxin-Like Protein Sh3bgrl3 At 1.6 A Resolution Length = 93

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 37/76 (48%), Gaps = 12/76 (15%)
Query: 8  SNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGK-ENEKEFMQQNSKATPSDSTVK 66
          S +V G + +K +Q  V  ILD K I Y ++DI++     +E   +  N KAT       
Sbjct: 8  STSVTGSREIKSQQSEVTRILDGKRIQYQLVDISQDNALRDEMRTLAGNPKAT------- 60
Query: 67 SNPLPPQIFNEEDYCG 82
              PPQI N   YCG
Sbjct: 61 ----PPQIVNGNHYCG 72

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	86
2ct6_A	111	SH3 domain-binding glutamic acid-rich-like protein	5e-17
1u6t_A	121	SH3 domain-binding glutamic acid-rich-like protein	8e-17
1t1v_A	93	SH3BGRL3, SH3 domain-binding glutamic acid-rich pr	1e-13
3msz_A	89	Glutaredoxin 1; alpha-beta sandwich, center for st	1e-04
1aba_A	87	Glutaredoxin; electron transport; HET: MES; 1.45A	4e-04
3ic4_A	92	Glutaredoxin (GRX-1); structural genomics, PSI, MC	4e-04
1fov_A	82	Glutaredoxin 3, GRX3; active site disulfide, CIS P	8e-04

>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 111

 Score = 68.8 bits (168), Expect = 5e-17
 Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 4/73 (5%)

Query: 10 TVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNP 69
          +  G   +KK+QQ V+  L++  I++  +DIT    E ++++M +N       +    NP
Sbjct: 16 SSSGFVAIKKKQQDVVRFLEANKIEFEEVDITMS--EEQRQWMYKNVPPEKKPTQ--GNP 71

Query: 70 LPPQIFNEEDYCG 82
          LPPQIFN + YCG
Sbjct: 72 LPPQIFNGDRYCG 84

>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A Length = 121

 Score = 68.5 bits (167), Expect = 8e-17
 Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 4/73 (5%)

Query: 10 TVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNP 69
          +  G   +KK+QQ VL  L++  I +   DI     E  +++M++N     +       P
Sbjct: 8  SSSGSTAIKKKQQDVLGFLEANKIGFEEKDIA--ANEENRKWMREN--VPENSRPATGYP 63

Query: 70 LPPQIFNEEDYCG 82
          LPPQIFNE  Y G
Sbjct: 64 LPPQIFNESQYRG 76

>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A Length = 93

 Score = 59.4 bits (144), Expect = 1e-13
 Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 10/73 (13%)

Query: 10 TVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNP 69
          +V G + +K +Q  V  ILD K I Y ++DI++      ++ M+  +             
Sbjct: 10 SVTGSREIKSQQSEVTRILDGKRIQYQLVDISQ--DNALRDEMRTLAG--------NPKA 59

Query: 70 LPPQIFNEEDYCG 82
           PPQI N   YCG
Sbjct: 60 TPPQIVNGNHYCG 72

>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A* Length = 89

 Score = 36.1 bits (84), Expect = 1e-04
 Identities = 13/49 (26%), Positives = 21/49 (42%), Gaps = 7/49 (14%)

Query: 28 LDSKNIDYTVIDITEPGKENEK-EFMQQNSKATPSDSTVKSNPLPPQIF 75
           +  NI +    I +  + ++  + M Q+ K     STV      PQIF
Sbjct: 24 FEENNIAFDETIIDDYAQRSKFYDEMNQSGKVIFPISTV------PQIF 66

>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A Length = 87

 Score = 34.7 bits (80), Expect = 4e-04
 Identities = 10/52 (19%), Positives = 18/52 (34%), Gaps = 10/52 (19%)

Query: 28 LDSKNIDYTVIDITEPGKENE----KEFMQQNSKATPSDSTVKSNPLPPQIF 75
          L  K   +  I+I       +     E + +  + T    T+      PQ+F
Sbjct: 24 LTVKKQPFEFINIMPEKGVFDDEKIAELLTKLGRDTQIGLTM------PQVF 69

>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus} Length = 92

 Score = 34.9 bits (81), Expect = 4e-04
 Identities = 10/48 (20%), Positives = 21/48 (43%), Gaps = 7/48 (14%)

Query: 28 LDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIF 75
          L  + +D+ VI I +   E  K+ +++    + S  +V      P + 
Sbjct: 32 LKREGVDFEVIWIDKLEGEERKKVIEKVHSISGS-YSV------PVVV 72

>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A* Length = 82

 Score = 34.0 bits (79), Expect = 8e-04
 Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 12/48 (25%)

Query: 28 LDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIF 75
          L SK + +  + I   G   ++E M + S  T    TV      PQIF
Sbjct: 21 LSSKGVSFQELPID--GNAAKREEMIKRSGRT----TV------PQIF 56

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	86
1u6t_A	121	SH3 domain-binding glutamic acid-rich-like protein	99.96
1t1v_A	93	SH3BGRL3, SH3 domain-binding glutamic acid-rich pr	99.92
2ct6_A	111	SH3 domain-binding glutamic acid-rich-like protein	99.87
2wul_A	118	Glutaredoxin related protein 5; chromosome 14 open	99.82
3zyw_A	111	Glutaredoxin-3; metal binding protein; 1.84A {Homo	99.77
3ipz_A	109	Monothiol glutaredoxin-S14, chloroplastic; electro	99.77
2lqo_A	92	Putative glutaredoxin RV3198.1/MT3292; TRX fold, o	99.76
1aba_A	87	Glutaredoxin; electron transport; HET: MES; 1.45A	99.76
3gx8_A	121	Monothiol glutaredoxin-5, mitochondrial; TRX fold,	99.75
2wem_A	118	Glutaredoxin-related protein 5; chromosome 14 open	99.75
1wik_A	109	Thioredoxin-like protein 2; picot homology 2 domai	99.73
3qmx_A	99	Glutaredoxin A, glutaredoxin 3; electron transport	99.73
2wci_A	135	Glutaredoxin-4; redox-active center, iron-sulfur c	99.72
3l4n_A	127	Monothiol glutaredoxin-6; C-terminal domain of GRX	99.71
2yan_A	105	Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {H	99.69
3h8q_A	114	Thioredoxin reductase 3; oxidoreductase, structura	99.68
3rhb_A	113	ATGRXC5, glutaredoxin-C5, chloroplastic; thioredox	99.66
3msz_A	89	Glutaredoxin 1; alpha-beta sandwich, center for st	99.64
3ctg_A	129	Glutaredoxin-2; reduced form, electron transport,	99.62
2khp_A	92	Glutaredoxin; thioredoxin type domain, ssgcid, ele	99.61
3c1r_A	118	Glutaredoxin-1; oxidized form, oxidoreductase, cyt	99.58
3ic4_A	92	Glutaredoxin (GRX-1); structural genomics, PSI, MC	99.56
1fov_A	82	Glutaredoxin 3, GRX3; active site disulfide, CIS P	99.55
2jad_A	362	Yellow fluorescent protein glutaredoxin fusion pro	99.53
2klx_A	89	Glutaredoxin; thioredoxin type domain, ssgcid, ele	99.52
1kte_A	105	Thioltransferase; redox-active center, electron tr	99.51
3nzn_A	103	Glutaredoxin; structural genomics, PSI2, MCSG, pro	99.5
1nm3_A	241	Protein HI0572; hybrid, peroxiredoxin, glutaredoxi	99.49
2hze_A	114	Glutaredoxin-1; thioredoxin fold, arsenic, dimethy	99.49
1ego_A	85	Glutaredoxin; electron transport; NMR {Escherichia	99.43
2cq9_A	130	GLRX2 protein, glutaredoxin 2; glutathione-S-trans	99.43
2ht9_A	146	Glutaredoxin-2; thioredoxin fold, iron-sulfur clus	99.4
1r7h_A	75	NRDH-redoxin; thioredoxin, glutaredoxin, redox pro	99.38
1h75_A	81	Glutaredoxin-like protein NRDH; electron transport	99.38
2x8g_A	598	Thioredoxin glutathione reductase; redox-active ce	99.33
2axo_A	270	Hypothetical protein ATU2684; alpha beta protein.,	99.02
2k8s_A	80	Thioredoxin; dimer, structural genomics, PSI-2, pr	98.89
2fgx_A	107	Putative thioredoxin; NET3, NESG, GFT-glutaredoxin	98.86
1wjk_A	100	C330018D20RIK protein; glutaredoxin, thioredoxin f	98.85
2e7p_A	116	Glutaredoxin; thioredoxin fold, poplar, electron t	98.84
1ttz_A	87	Conserved hypothetical protein; structural genomic	98.78
2kok_A	120	Arsenate reductase; brucellosis, zoonotic, oxidore	98.62
1rw1_A	114	Conserved hypothetical protein YFFB; thioredoxin f	98.57
1z3e_A	132	Regulatory protein SPX; bacterial transcription re	98.47
3rdw_A	121	Putative arsenate reductase; structural genomics,	98.43
1s3c_A	141	Arsenate reductase; ARSC, arsenite, oxidoreductase	98.41
3gkx_A	120	Putative ARSC family related protein; ARSC family	98.23
3l78_A	120	Regulatory protein SPX; transcription, transcripti	98.12
3fz4_A	120	Putative arsenate reductase; APC61768, structural	98.03
3f0i_A	119	Arsenate reductase; structural genomics, IDP01300,	98.03
4hi7_A	228	GI20122; GST, glutathione S-transferase, enzyme fu	98.02
3qav_A	243	RHO-class glutathione S-transferase; cytosol; 2.10	97.57
1zl9_A	207	GST class-sigma, glutathione S-transferase 5; glut	97.55
4f03_A	253	Glutathione transferase; GST fold; 1.80A {Phaneroc	97.51
2on7_A	206	Nagst-1, Na glutathione S-transferase 1; hookworm;	97.49
1tw9_A	206	Glutathione S-transferase 2; 1.71A {Heligmosomoide	97.46
1nho_A	85	Probable thioredoxin; beta sheet, alpha helix, oxi	97.46
3ir4_A	218	Glutaredoxin 2; glutathione, IDP00895, structural	97.46
1yq1_A	208	Glutathione S-transferase; nematoda, structural ge	97.44
1okt_A	211	Glutathione S-transferase; GST; 1.9A {Plasmodium f	97.4
3ay8_A	216	Glutathione S-transferase; GST fold, GST binding,	97.38
2on5_A	206	Nagst-2, Na glutathione S-transferase 2; hookworm;	97.33
2imi_A	221	Epsilon-class glutathione S-transferase; HET: GSH;	97.32
3ik7_A	222	Glutathione S-transferase A4; human GST A4-4, enzy	97.32
1k3y_A	221	GSTA1-1, glutathione S-transferase A1; S-hexyl glu	97.32
3m3m_A	210	Glutathione S-transferase; PSI-II, structural geno	97.31
2ws2_A	204	NU-class GST, glutathione S-transferase; parasite,	97.3
2a2r_A	210	Glutathione S-transferase P; detoxification, nitri	97.29
1vf1_A	229	Glutathione S-transferase 3; detoxification; HET:	97.23
1e6b_A	221	Glutathione S-transferase; 1.65A {Arabidopsis thal	97.22
2hnl_A	225	Glutathione S-transferase 1; prostaglandin synthas	97.22
3bby_A	215	Uncharacterized GST-like protein YFCF; NP_416804.1	97.19
3lyp_A	215	Stringent starvation protein A; structural genomic	97.16
4g10_A	265	Glutathione S-transferase homolog; thioredoxin fol	97.11
2cz2_A	223	Maleylacetoacetate isomerase; structural genomics,	97.09
3iso_A	218	Putative glutathione transferase; GST; HET: GSH; 1	97.08
3ic8_A	310	Uncharacterized GST-like proteinprotein; glutathio	97.06
2v6k_A	214	Maleylpyruvate isomerase; glutathione-S-transferas	97.06
1k0d_A	260	URE2 protein; nitrate assimilation, structural gen	97.01
3m8n_A	225	Possible glutathione S-transferase; PSI-II, struct	97.01
1hyu_A	521	AHPF, alkyl hydroperoxide reductase subunit F; thi	97.0
2vo4_A	219	2,4-D inducible glutathione S-transferase; herbici	96.98
3lxz_A	229	Glutathione S-transferase family protein; structur	96.96
1b48_A	221	GST, mgsta4-4, protein (glutathione S-transferase)	96.95
1axd_A	209	Glutathione S-transferase I; transferase, herbicid	96.92
2wb9_A	211	Glutathione transferase sigma class; thioredoxin f	96.92
2cvd_A	198	Glutathione-requiring prostaglandin D synthase; gl	96.91
3vk9_A	216	Glutathione S-transferase delta; glutathione bindi	96.91
1nhy_A	219	EF-1-gamma 1, elongation factor 1-gamma 1; protein	96.91
3gtu_B	224	Glutathione S-transferase; conjugation, detoxifica	96.9
1oyj_A	231	Glutathione S-transferase; herbicide detoxificatio	96.88
4ags_A	471	Thiol-dependent reductase 1; transferase, leishman	96.85
4exj_A	238	Uncharacterized protein; transferase-like protein,	96.84
3ubk_A	242	Glutathione transferase; GSH binding; 1.95A {Lepto	96.84
3n5o_A	235	Glutathione transferase; seattle structural genomi	96.8
1ljr_A	244	HGST T2-2, glutathione S-transferase; HET: GSH; 3.	96.8
4iel_A	229	Glutathione S-transferase, N-terminal domain PROT;	96.8
1pn9_A	209	GST class-delta, glutathione S-transferase 1-6; pr	96.78
1fo5_A	85	Thioredoxin; disulfide oxidoreductase, structural	96.77
2ahe_A	267	Chloride intracellular channel protein 4; glutathi	96.75
3m0f_A	213	Uncharacterized protein GST_N; PSI-2, NYSGXRC, glu	96.73
1m0u_A	249	GST2 gene product; flight muscle protein, sigma, t	96.72
3ibh_A	233	GST-II, saccharomyces cerevisiae GTT2; glutathione	96.7
4hz2_A	230	Glutathione S-transferase domain; glutathione,enzy	96.66
3lyk_A	216	Stringent starvation protein A homolog; structural	96.66
1z9h_A	290	Membrane-associated prostaglandin E synthase-2; me	96.65
1aw9_A	216	Glutathione S-transferase III; herbicide detoxific	96.63
1r5a_A	218	Glutathione transferase; glutathione S-transferase	96.61
4hoj_A	210	REGF protein; GST, glutathione S-transferase, enzy	96.61
3ein_A	209	GST class-theta, glutathione S-transferase 1-1; de	96.61
1yy7_A	213	SSPA, stringent starvation protein A; GST fold, tr	96.6
1v2a_A	210	Glutathione transferase GST1-6; glutathione S-tran	96.59
3f6d_A	219	Adgstd4-4, glutathione transferase GST1-4; HET: GT	96.56
3niv_A	222	Glutathione S-transferase; structural genomics, PS	96.54
2r4v_A	247	XAP121, chloride intracellular channel protein 2;	96.54
2hls_A	243	Protein disulfide oxidoreductase; thioredoxin fold	96.53
3vln_A	241	GSTO-1, glutathione S-transferase omega-1; GST fol	96.48
1gnw_A	211	Glutathione S-transferase; herbicide detoxificatio	96.41
1oe8_A	211	Glutathione S-transferase; schistosomiasis, detoxi	96.41
4hz4_A	217	Glutathione-S-transferase; enzyme function initiat	96.39
4ecj_A	244	Glutathione S-transferase; transferase-like protei	96.32
2gsq_A	202	Squid GST, glutathione S-transferase; squid digest	96.32
4ikh_A	244	Glutathione S-transferase; enzyme function initiat	96.26
3kp9_A	291	Vkorc1/thioredoxin domain protein; warfarin, disul	96.25
3rbt_A	246	Glutathione transferase O1; glutathione S-transfer	96.24
2c4j_A	218	Glutathione S-transferase MU 2; glutathione transf	96.14
2ycd_A	230	Glutathione S-transferase; SOIL bacteria, herbicid	96.1
1k0m_A	241	CLIC1, NCC27, chloride intracellular channel prote	96.05
4glt_A	225	Glutathione S-transferase-like protein; structural	96.02
4gf0_A	215	Glutathione S-transferase; GST, enzyme function in	95.96
4dej_A	231	Glutathione S-transferase related protein; transfe	95.93
2c3n_A	247	Glutathione S-transferase theta 1; glutathione tra	95.92
1tu7_A	208	Glutathione S-transferase 2; HET: GSH; 1.50A {Onch	95.91
3q18_A	239	GSTO-2, glutathione S-transferase omega-2; glutath	95.9
2fhe_A	216	GST, glutathione S-transferase; transferase-substr	95.89
3kp8_A	106	Vkorc1/thioredoxin domain protein; blood coagulati	95.79
3r2q_A	202	Uncharacterized GST-like protein YIBF; transferase	95.78
1dug_A	234	Chimera of glutathione S-transferase-synthetic lin	95.75
3gx0_A	215	GST-like protein YFCG; transferase, glutathione, g	95.7
1gwc_A	230	Glutathione S-transferase TSI-1; herbicide detoxif	95.67
1gsu_A	219	GST, CGSTM1-1, class-MU glutathione S-transferase;	95.57
3h1n_A	252	Probable glutathione S-transferase; APC84167, bord	95.56
3cbu_A	214	Probable GST-related protein; thioredoxin fold, GS	95.45
4ags_A	471	Thiol-dependent reductase 1; transferase, leishman	95.43
3tou_A	226	Glutathione S-transferase protein; GSH binding sit	95.43
3lsz_A	225	Glutathione S-transferase; xenobiotic, biodegradat	95.21
4id0_A	214	Glutathione S-transferase-like protein YIBF; GST,	95.2
2x64_A	207	Glutathione-S-transferase; detoxification enzyme;	94.2
3uar_A	227	Glutathione S-transferase; GSH binding site; HET:	94.14
2l6c_A	110	Thioredoxin; oxidoreductase; NMR {Desulfovibrio vu	94.13
3f6r_A	148	Flavodoxin; FMN binding, oxidized, electron transp	94.0
3fy7_A	250	Chloride intracellular channel protein 3; GST, glu	93.61
2yv7_A	260	CG10997-PA, LD46306P, CLIC; dmclic, chloride ION c	93.07
2yv9_A	291	Chloride intracellular channel EXC-4; chloride ION	92.14
2fno_A	248	AGR_PAT_752P; thioredoxin fold, GST C-terminal dom	91.99
1f2e_A	201	Glutathione S-transferase; GST complexed with glut	91.56
4gci_A	211	Glutathione S-transferase; GST, enzyme function in	91.1
1syr_A	112	Thioredoxin; SGPP, structural genomics, PSI, prote	90.94
1pmt_A	203	PMGST, GST B1-1, glutathione transferase; glutathi	90.87
2pvq_A	201	Glutathione S-transferase; xenobiotics detoxificat	90.85
1n2a_A	201	Glutathione S-transferase; HET: GTS; 1.90A {Escher	90.81
1b8x_A	280	Protein (AML-1B); nuclear matrix targeting signal	90.5
2oe3_A	114	Thioredoxin-3; electron transport, alpha/beta sand	90.37
3ktb_A	106	Arsenical resistance operon trans-acting represso;	90.2
3m9j_A	105	Thioredoxin; oxidoreductase; 1.10A {Homo sapiens}	89.86
1bg5_A	254	MAB, fusion protein of alpha-Na,K-ATPase with glut	89.8
3d6i_A	112	Monothiol glutaredoxin-3; thioredoxin-like, electr	89.49
3kgk_A	110	Arsenical resistance operon trans-acting represso;	89.46
3c8e_A	288	YGHU, glutathione S-transferase homologue; glutath	89.01
2dsa_A	203	Glutathione S-transferase; HET: GSH HPX; 2.10A {Bu	88.86
1zma_A	118	Bacterocin transport accessory protein; alpha-beta	88.73
2ywm_A	229	Glutaredoxin-like protein; redox protein, structur	88.67
1w4v_A	119	Thioredoxin, mitochondrial; antioxidant enzyme, mi	88.67
2e0q_A	104	Thioredoxin; electron transport; 1.49A {Sulfolobus	88.6
1r26_A	125	Thioredoxin; redox-active disulfide, electron tran	88.39
2yzu_A	109	Thioredoxin; redox protein, electron transport, st	87.79
2wz9_A	153	Glutaredoxin-3; protein binding; 1.55A {Homo sapie	87.51
1ilo_A	77	Conserved hypothetical protein MTH895; beta-alpha-	87.49
3hly_A	161	Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein	87.46
2i4a_A	107	Thioredoxin; acidophIle, disulfide exchange, oxido	87.45
1ykg_A	167	SIR-FP, sulfite reductase [NADPH] flavoprotein alp	87.02
2vm1_A	118	Thioredoxin, thioredoxin H isoform 1.; oxidoreduct	86.91
2hna_A	147	Protein MIOC, flavodoxin; alpha-beta sandwich, fla	86.82
1nsw_A	105	Thioredoxin, TRX; thermostability, electron transp	86.78
2voc_A	112	Thioredoxin; electron transport, homodimer, disulf	86.78
1xwb_A	106	Thioredoxin; dimerization, redox regulation, THI X	86.56
1thx_A	115	Thioredoxin, thioredoxin 2; oxido-reductase, elect	86.37
2f51_A	118	Thioredoxin; electron transport; 1.90A {Trichomona	86.03
1ti3_A	113	Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Popul	85.99
2vim_A	104	Thioredoxin, TRX; thioredoxin fold, oxidoreductase	85.86
2xc2_A	117	Thioredoxinn; oxidoreductase, protein disulfide re	85.11
2fwh_A	134	Thiol:disulfide interchange protein DSBD; thioredo	85.1
2trx_A	108	Thioredoxin; electron transport; 1.68A {Escherichi	84.87
3fni_A	159	Putative diflavin flavoprotein A 3; alpha-beta pro	84.86
1faa_A	124	Thioredoxin F; electron transport; 1.85A {Spinacia	84.79
3f3q_A	109	Thioredoxin-1; His TAG, electron transport, cytopl	84.65
2vlu_A	122	Thioredoxin, thioredoxin H isoform 2.; oxidoreduct	84.61
1ep7_A	112	Thioredoxin CH1, H-type; electron transport; 2.10A	83.37
1xfl_A	124	Thioredoxin H1; AT3G51030, structural genomics, pr	83.19
3qfa_C	116	Thioredoxin; protein-protein complex, rossmann fol	83.15
1v98_A	140	Thioredoxin; oxidoreductase, structural genomics,	82.99
2a5l_A	200	Trp repressor binding protein WRBA; APC5760, PA094	82.97
2i1u_A	121	Thioredoxin, TRX, MPT46; redox protein, electron t	82.87
3iv4_A	112	Putative oxidoreductase; APC23140, meticillin-resi	82.86
5nul_A	138	Flavodoxin; electron transport, flavoprotein, FMN;	82.72
1gh2_A	107	Thioredoxin-like protein; redox-active center, ele	81.97
1dby_A	107	Chloroplast thioredoxin M CH2; thioredoxin CH2, ch	81.96
1f4p_A	147	Flavodoxin; electron transport, flavoprotein, FMN,	81.73
2pu9_C	111	TRX-F, thioredoxin F-type, chloroplast; protein-pr	81.41
1bvy_F	191	Protein (cytochrome P450 BM-3); fatty acid monooxy	81.33
3s40_A	304	Diacylglycerol kinase; structural genomics, the ce	81.1
2l57_A	126	Uncharacterized protein; structural genomics, unkn	81.07
3gnj_A	111	Thioredoxin domain protein; APC92103, STR genomics	80.9
1t00_A	112	Thioredoxin, TRX; redox regulation, multifunction	80.48
2j23_A	121	Thioredoxin; immune protein, autoreactivity, cross	80.28

>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A

Probab=99.96  E-value=6.9e-30  Score=173.37  Aligned_cols=79  Identities=32%  Similarity=0.539  Sum_probs=69.4

Q ss_pred             cEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeeeec
Q psy3969           4 PYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCGV   83 (86)
Q Consensus         4 ~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yiGg   83 (86)
                      +.||+||.|++++||++|++|++||+++||+|++|||+  .|+++|++|+++++.++++  .+|.+|||||||||+||||
T Consensus         2 V~vYtt~~c~~c~~kk~c~~aK~lL~~kgV~feEidI~--~d~~~r~eM~~~~~~~~~~--~~G~~tvPQIFi~~~~iGG   77 (121)
T 1u6t_A            2 IRVYIASSSGSTAIKKKQQDVLGFLEANKIGFEEKDIA--ANEENRKWMRENVPENSRP--ATGYPLPPQIFNESQYRGD   77 (121)
T ss_dssp             EEEEECTTCSCHHHHHHHHHHHHHHHHTTCCEEEEECT--TCHHHHHHHHHHSCGGGSC--SSSSCCSCEEEETTEEEEE
T ss_pred             EEEEecCCCCCccchHHHHHHHHHHHHCCCceEEEECC--CCHHHHHHHHHhccccccc--cCCCcCCCEEEECCEEEec
Confidence            68999999999999999999999999999999999999  8999999999999421111  1245699999999999999


Q ss_pred             cCC
Q psy3969          84 FRY   86 (86)
Q Consensus        84 yd~   86 (86)
                      |||
T Consensus        78 ~Dd   80 (121)
T 1u6t_A           78 YDA   80 (121)
T ss_dssp             HHH
T ss_pred             hHH
Confidence            984

>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A

Probab=99.92  E-value=3.1e-25  Score=139.31  Aligned_cols=76  Identities=32%  Similarity=0.545  Sum_probs=71.1

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCee
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDY   80 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~y   80 (86)
                      |.++.||.++.|++.+++++|.+|+++|+++||+|+++||+  .+++.+++|++++|.        +..+|||||+||+|
T Consensus         1 M~~v~ly~~~~C~~c~~~~~~~~ak~~L~~~~i~~~~~di~--~~~~~~~~l~~~~g~--------~~~~vP~ifi~g~~   70 (93)
T 1t1v_A            1 MSGLRVYSTSVTGSREIKSQQSEVTRILDGKRIQYQLVDIS--QDNALRDEMRTLAGN--------PKATPPQIVNGNHY   70 (93)
T ss_dssp             CCCEEEEECSSCSCHHHHHHHHHHHHHHHHTTCCCEEEETT--SCHHHHHHHHHHTTC--------TTCCSCEEEETTEE
T ss_pred             CCCEEEEEcCCCCCchhhHHHHHHHHHHHHCCCceEEEECC--CCHHHHHHHHHHhCC--------CCCCCCEEEECCEE
Confidence            89999999999999999999999999999999999999999  789999999999971        24599999999999


Q ss_pred             eeccCC
Q psy3969          81 CGVFRY   86 (86)
Q Consensus        81 iGgyd~   86 (86)
                      +||||+
T Consensus        71 igG~d~   76 (93)
T 1t1v_A           71 CGDYEL   76 (93)
T ss_dssp             EEEHHH
T ss_pred             EeCHHH
Confidence            999984

>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.87  E-value=1.8e-22  Score=131.49  Aligned_cols=80  Identities=33%  Similarity=0.614  Sum_probs=69.3

Q ss_pred             CcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeeee
Q psy3969           3 KPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCG   82 (86)
Q Consensus         3 ~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yiG   82 (86)
                      ++.||.++.|++.++|++|++|+++|+++||+|+++||+  .+++.+++|+++++..+...  .+.+||||||+||+|+|
T Consensus         9 ~V~vy~~~~C~~C~~~~~~~~ak~~L~~~gi~y~~vdI~--~~~~~~~~l~~~~~~~~~~~--~g~~tvP~vfi~g~~iG   84 (111)
T 2ct6_A            9 VIRVFIASSSGFVAIKKKQQDVVRFLEANKIEFEEVDIT--MSEEQRQWMYKNVPPEKKPT--QGNPLPPQIFNGDRYCG   84 (111)
T ss_dssp             CEEEEECSSCSCHHHHHHHHHHHHHHHHTTCCEEEEETT--TCHHHHHHHHHSCCTTTCCS--SSSCCSCEEEETTEEEE
T ss_pred             EEEEEEcCCCCCcccchhHHHHHHHHHHcCCCEEEEECC--CCHHHHHHHHHHhccccccc--CCCCCCCEEEECCEEEe
Confidence            689999999999999999999999999999999999999  79999999999973111100  14569999999999999


Q ss_pred             ccCC
Q psy3969          83 VFRY   86 (86)
Q Consensus        83 gyd~   86 (86)
                      |||+
T Consensus        85 G~d~   88 (111)
T 2ct6_A           85 DYDS   88 (111)
T ss_dssp             EHHH
T ss_pred             CHHH
Confidence            9984

>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}

Probab=99.82  E-value=1.1e-20  Score=127.12  Aligned_cols=66  Identities=17%  Similarity=0.268  Sum_probs=59.6

Q ss_pred             CcEEEEEcc-----cCchhchHHHHHHHHHHHhCCC-ceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEe
Q psy3969           3 KPYKISNTV-----RGVKGVKKRQQRVLMILDSKNI-DYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFN   76 (86)
Q Consensus         3 ~~~~y~ss~-----sgn~~vK~~q~~a~~lL~~k~I-~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFi   76 (86)
                      ++.||+.|.     |++      |.+|++||+++|| +|+++||.  .+++.|++|.+.+|  ++        |||||||
T Consensus        21 ~VvvF~Kgt~~~P~C~f------c~~ak~lL~~~gv~~~~~~~v~--~~~~~r~~l~~~sg--~~--------TvPqIFI   82 (118)
T 2wul_A           21 KVVVFLKGTPEQPQCGF------SNAVVQILRLHGVRDYAAYNVL--DDPELRQGIKDYSN--WP--------TIPQVYL   82 (118)
T ss_dssp             SEEEEESBCSSSBSSHH------HHHHHHHHHHTTCCSCEEEETT--SCHHHHHHHHHHHT--CC--------SSCEEEE
T ss_pred             CEEEEEcCCCCCCCCHH------HHHHHHHHHHhCCcCeEeeccc--CCHHHHHHHHHhcc--CC--------CCCeEeE
Confidence            567777764     888      9999999999999 79999999  89999999999998  44        9999999


Q ss_pred             CCeeeeccCC
Q psy3969          77 EEDYCGVFRY   86 (86)
Q Consensus        77 gd~yiGgyd~   86 (86)
                      ||+|+||||+
T Consensus        83 ~g~~IGG~Dd   92 (118)
T 2wul_A           83 NGEFVGGCDI   92 (118)
T ss_dssp             TTEEEECHHH
T ss_pred             CCEEECCHHH
Confidence            9999999985

>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}

Probab=99.77  E-value=3.8e-19  Score=116.28  Aligned_cols=66  Identities=18%  Similarity=0.267  Sum_probs=60.1

Q ss_pred             CcEEEEE-----cccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeC
Q psy3969           3 KPYKISN-----TVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNE   77 (86)
Q Consensus         3 ~~~~y~s-----s~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFig   77 (86)
                      ++.||..     +-|+.      |.+|+++|+++||+|+++||+  .+++.+++|.+.+|  ++        ||||||+|
T Consensus        17 ~Vvlf~kg~~~~~~Cp~------C~~ak~~L~~~gi~y~~~di~--~d~~~~~~l~~~~g--~~--------tvP~ifi~   78 (111)
T 3zyw_A           17 PCMLFMKGTPQEPRCGF------SKQMVEILHKHNIQFSSFDIF--SDEEVRQGLKAYSS--WP--------TYPQLYVS   78 (111)
T ss_dssp             SEEEEESBCSSSBSSHH------HHHHHHHHHHTTCCCEEEEGG--GCHHHHHHHHHHHT--CC--------SSCEEEET
T ss_pred             CEEEEEecCCCCCcchh------HHHHHHHHHHcCCCeEEEECc--CCHHHHHHHHHHHC--CC--------CCCEEEEC
Confidence            5677777     88888      999999999999999999999  78999999999997  43        99999999


Q ss_pred             CeeeeccCC
Q psy3969          78 EDYCGVFRY   86 (86)
Q Consensus        78 d~yiGgyd~   86 (86)
                      |+|+||||+
T Consensus        79 g~~iGG~d~   87 (111)
T 3zyw_A           79 GELIGGLDI   87 (111)
T ss_dssp             TEEEECHHH
T ss_pred             CEEEecHHH
Confidence            999999985

>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A

Probab=99.77  E-value=4.3e-19  Score=114.98  Aligned_cols=67  Identities=18%  Similarity=0.257  Sum_probs=60.2

Q ss_pred             CCcEEEEEc-----ccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEe
Q psy3969           2 KKPYKISNT-----VRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFN   76 (86)
Q Consensus         2 ~~~~~y~ss-----~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFi   76 (86)
                      .++.||..+     -|+.      |.+|+++|+++||+|+++||.  .+++.+++|.+.+|  .+        +|||||+
T Consensus        18 ~~Vvvy~k~t~~~p~Cp~------C~~ak~~L~~~gi~~~~~dI~--~~~~~~~~l~~~~g--~~--------tvP~ifi   79 (109)
T 3ipz_A           18 EKVVLFMKGTRDFPMCGF------SNTVVQILKNLNVPFEDVNIL--ENEMLRQGLKEYSN--WP--------TFPQLYI   79 (109)
T ss_dssp             SSEEEEESBCSSSBSSHH------HHHHHHHHHHTTCCCEEEEGG--GCHHHHHHHHHHHT--CS--------SSCEEEE
T ss_pred             CCEEEEEecCCCCCCChh------HHHHHHHHHHcCCCcEEEECC--CCHHHHHHHHHHHC--CC--------CCCeEEE
Confidence            457777776     6888      999999999999999999998  79999999999997  33        8999999


Q ss_pred             CCeeeeccCC
Q psy3969          77 EEDYCGVFRY   86 (86)
Q Consensus        77 gd~yiGgyd~   86 (86)
                      ||+|+||||+
T Consensus        80 ~g~~iGG~d~   89 (109)
T 3ipz_A           80 GGEFFGGCDI   89 (109)
T ss_dssp             TTEEEECHHH
T ss_pred             CCEEEeCHHH
Confidence            9999999985

>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}

Probab=99.76  E-value=3e-18  Score=109.92  Aligned_cols=67  Identities=16%  Similarity=0.124  Sum_probs=59.6

Q ss_pred             CCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeC-Cee
Q psy3969           2 KKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNE-EDY   80 (86)
Q Consensus         2 ~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFig-d~y   80 (86)
                      .++.||.++-|+.      |.+|+++|+++||+|+++||+  .|++++++|.++++         |..||||||++ +.+
T Consensus         4 a~I~vYs~~~Cp~------C~~aK~~L~~~gi~y~~idi~--~d~~~~~~~~~~~~---------G~~tVP~I~i~Dg~~   66 (92)
T 2lqo_A            4 AALTIYTTSWCGY------CLRLKTALTANRIAYDEVDIE--HNRAAAEFVGSVNG---------GNRTVPTVKFADGST   66 (92)
T ss_dssp             SCEEEEECTTCSS------HHHHHHHHHHTTCCCEEEETT--TCHHHHHHHHHHSS---------SSSCSCEEEETTSCE
T ss_pred             CcEEEEcCCCCHh------HHHHHHHHHhcCCceEEEEcC--CCHHHHHHHHHHcC---------CCCEeCEEEEeCCEE
Confidence            3689999999999      999999999999999999999  89999999999984         23499999995 577


Q ss_pred             eeccC
Q psy3969          81 CGVFR   85 (86)
Q Consensus        81 iGgyd   85 (86)
                      ++|++
T Consensus        67 l~~~~   71 (92)
T 2lqo_A           67 LTNPS   71 (92)
T ss_dssp             EESCC
T ss_pred             EeCCC
Confidence            78875

>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A

Probab=99.76  E-value=1e-18  Score=107.82  Aligned_cols=73  Identities=14%  Similarity=0.095  Sum_probs=60.2

Q ss_pred             CcEEEEEc----ccCchhchHHHHHHHHHHHhCCCceEEEEccCC---CCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEE
Q psy3969           3 KPYKISNT----VRGVKGVKKRQQRVLMILDSKNIDYTVIDITEP---GKENEKEFMQQNSKATPSDSTVKSNPLPPQIF   75 (86)
Q Consensus         3 ~~~~y~ss----~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~---~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIF   75 (86)
                      ++.||.++    -|+.      |.+|+++|+++||+|+++||+.-   .+++.+++|.+++|  .+.   ....+|||||
T Consensus         1 ~v~iY~~~~~~~~Cp~------C~~ak~~L~~~gi~y~~idI~~~~~~~~~~~~~~l~~~~g--~~~---~~~~tvP~v~   69 (87)
T 1aba_A            1 MFKVYGYDSNIHKCGP------CDNAKRLLTVKKQPFEFINIMPEKGVFDDEKIAELLTKLG--RDT---QIGLTMPQVF   69 (87)
T ss_dssp             CEEEEECCTTTSCCHH------HHHHHHHHHHTTCCEEEEESCSBTTBCCHHHHHHHHHHHT--CSC---CTTCCSCEEE
T ss_pred             CEEEEEeCCCCCcCcc------HHHHHHHHHHcCCCEEEEEeeccccccCHHHHHHHHHHhC--CCC---CCCCccCEEE
Confidence            46899999    9998      99999999999999999999711   36899999999997  210   0012899999


Q ss_pred             e-CCeeeeccCC
Q psy3969          76 N-EEDYCGVFRY   86 (86)
Q Consensus        76 i-gd~yiGgyd~   86 (86)
                      + ||+++||||+
T Consensus        70 i~~g~~igG~d~   81 (87)
T 1aba_A           70 APDGSHIGGFDQ   81 (87)
T ss_dssp             CTTSCEEESHHH
T ss_pred             EECCEEEeCHHH
Confidence            9 9999999985

>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}

Probab=99.75  E-value=1.2e-18  Score=115.61  Aligned_cols=67  Identities=12%  Similarity=0.225  Sum_probs=60.6

Q ss_pred             CCcEEEEEc-----ccCchhchHHHHHHHHHHHhCCCc---eEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCe
Q psy3969           2 KKPYKISNT-----VRGVKGVKKRQQRVLMILDSKNID---YTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQ   73 (86)
Q Consensus         2 ~~~~~y~ss-----~sgn~~vK~~q~~a~~lL~~k~I~---f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQ   73 (86)
                      .++.||..|     -|+.      |.+|++||+++||+   |+++||.  .+++.+++|.+.+|  ++        ||||
T Consensus        16 ~~Vvvfsk~t~~~p~Cp~------C~~ak~lL~~~gv~~~~~~~~dv~--~~~~~~~~l~~~sg--~~--------tvP~   77 (121)
T 3gx8_A           16 APVVLFMKGTPEFPKCGF------SRATIGLLGNQGVDPAKFAAYNVL--EDPELREGIKEFSE--WP--------TIPQ   77 (121)
T ss_dssp             CSEEEEESBCSSSBCTTH------HHHHHHHHHHHTBCGGGEEEEECT--TCHHHHHHHHHHHT--CC--------SSCE
T ss_pred             CCEEEEEeccCCCCCCcc------HHHHHHHHHHcCCCcceEEEEEec--CCHHHHHHHHHHhC--CC--------CCCe
Confidence            357788877     6999      99999999999999   9999999  79999999999998  44        9999


Q ss_pred             EEeCCeeeeccCC
Q psy3969          74 IFNEEDYCGVFRY   86 (86)
Q Consensus        74 IFigd~yiGgyd~   86 (86)
                      |||||+|+||||+
T Consensus        78 vfI~g~~iGG~d~   90 (121)
T 3gx8_A           78 LYVNKEFIGGCDV   90 (121)
T ss_dssp             EEETTEEEESHHH
T ss_pred             EEECCEEEecHHH
Confidence            9999999999985

>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1

Probab=99.73  E-value=5.9e-18  Score=108.76  Aligned_cols=67  Identities=22%  Similarity=0.355  Sum_probs=61.1

Q ss_pred             CCcEEEEE-----cccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEe
Q psy3969           2 KKPYKISN-----TVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFN   76 (86)
Q Consensus         2 ~~~~~y~s-----s~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFi   76 (86)
                      .++.||++     +-|+.      |.+|+.+|+++||+|+++||+  .+++.+++|.+.+|  .        .+|||||+
T Consensus        15 ~~vvvy~~g~~~~~~Cp~------C~~ak~~L~~~~i~~~~vdi~--~~~~~~~~l~~~~g--~--------~~vP~ifi   76 (109)
T 1wik_A           15 ASVMLFMKGNKQEAKCGF------SKQILEILNSTGVEYETFDIL--EDEEVRQGLKTFSN--W--------PTYPQLYV   76 (109)
T ss_dssp             SSEEEEESSTTTCCCSST------HHHHHHHHHHTCSCEEEEESS--SCHHHHHHHHHHHS--C--------CSSCEEEC
T ss_pred             CCEEEEEecCCCCCCCch------HHHHHHHHHHcCCCeEEEECC--CCHHHHHHHHHHhC--C--------CCCCEEEE
Confidence            46788988     78999      999999999999999999999  78999999999997  3        38999999


Q ss_pred             CCeeeeccCC
Q psy3969          77 EEDYCGVFRY   86 (86)
Q Consensus        77 gd~yiGgyd~   86 (86)
                      ||+++||||+
T Consensus        77 ~g~~igG~d~   86 (109)
T 1wik_A           77 RGDLVGGLDI   86 (109)
T ss_dssp             SSSEEECHHH
T ss_pred             CCEEEcCHHH
Confidence            9999999974

>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0

Probab=99.73  E-value=5.3e-18  Score=108.56  Aligned_cols=67  Identities=21%  Similarity=0.236  Sum_probs=61.7

Q ss_pred             CCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhc-CCCCCCCCCCCCCCCCeEEeCCee
Q psy3969           2 KKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNS-KATPSDSTVKSNPLPPQIFNEEDY   80 (86)
Q Consensus         2 ~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~-g~~~~~~~~~~~~tvPQIFigd~y   80 (86)
                      .++.||.++-|+.      |.+|+.+|+++||+|+++||+  .+++.+++|.+.+ |  .        .++||||+||++
T Consensus        16 ~~v~vy~~~~Cp~------C~~ak~~L~~~~i~y~~idI~--~~~~~~~~l~~~~~g--~--------~~vP~ifi~g~~   77 (99)
T 3qmx_A           16 AKIEIYTWSTCPF------CMRALALLKRKGVEFQEYCID--GDNEAREAMAARANG--K--------RSLPQIFIDDQH   77 (99)
T ss_dssp             CCEEEEECTTCHH------HHHHHHHHHHHTCCCEEEECT--TCHHHHHHHHHHTTT--C--------CCSCEEEETTEE
T ss_pred             CCEEEEEcCCChh------HHHHHHHHHHCCCCCEEEEcC--CCHHHHHHHHHHhCC--C--------CCCCEEEECCEE
Confidence            3678999999999      999999999999999999999  7999999999998 5  3        489999999999


Q ss_pred             eeccCC
Q psy3969          81 CGVFRY   86 (86)
Q Consensus        81 iGgyd~   86 (86)
                      +||||+
T Consensus        78 igG~d~   83 (99)
T 3qmx_A           78 IGGCDD   83 (99)
T ss_dssp             EESHHH
T ss_pred             EeChHH
Confidence            999974

>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A

Probab=99.72  E-value=5.7e-18  Score=115.05  Aligned_cols=67  Identities=12%  Similarity=0.172  Sum_probs=60.0

Q ss_pred             CCcEEEEE-----cccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEe
Q psy3969           2 KKPYKISN-----TVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFN   76 (86)
Q Consensus         2 ~~~~~y~s-----s~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFi   76 (86)
                      .++.||.+     .-|+.      |.+|+++|+++||+|+++||+  .+++.+++|.+.+|  +        +||||||+
T Consensus        35 ~~Vvvy~ks~~~~~~Cp~------C~~ak~~L~~~gv~y~~vdI~--~d~~~~~~L~~~~G--~--------~tvP~VfI   96 (135)
T 2wci_A           35 NPILLYMKGSPKLPSCGF------SAQAVQALAACGERFAYVDIL--QNPDIRAELPKYAN--W--------PTFPQLWV   96 (135)
T ss_dssp             CSEEEEESBCSSSBSSHH------HHHHHHHHHTTCSCCEEEEGG--GCHHHHHHHHHHHT--C--------CSSCEEEE
T ss_pred             CCEEEEEEecCCCCCCcc------HHHHHHHHHHcCCceEEEECC--CCHHHHHHHHHHHC--C--------CCcCEEEE
Confidence            46788888     46777      999999999999999999999  78999999999997  3        39999999


Q ss_pred             CCeeeeccCC
Q psy3969          77 EEDYCGVFRY   86 (86)
Q Consensus        77 gd~yiGgyd~   86 (86)
                      ||+++||||+
T Consensus        97 ~G~~iGG~d~  106 (135)
T 2wci_A           97 DGELVGGCDI  106 (135)
T ss_dssp             TTEEEESHHH
T ss_pred             CCEEEEChHH
Confidence            9999999974

>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}

Probab=99.71  E-value=5e-18  Score=114.16  Aligned_cols=70  Identities=13%  Similarity=0.196  Sum_probs=58.3

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHhC---CCceEEEEccCCCC-HhHHHHHHHhcCCCCCCCCCCCCCCCCeEEe
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDSK---NIDYTVIDITEPGK-ENEKEFMQQNSKATPSDSTVKSNPLPPQIFN   76 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k---~I~f~eiDI~~~~d-~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFi   76 (86)
                      |.++.||.++-|+.      |.+|++||+++   +++|++|||+...+ ++.++++.+.+|  +        .||||||+
T Consensus        13 ~~~Vvvysk~~Cp~------C~~ak~lL~~~~~~~v~~~~idid~~~d~~~~~~~l~~~~G--~--------~tVP~IfI   76 (127)
T 3l4n_A           13 LSPIIIFSKSTCSY------SKGMKELLENEYQFIPNYYIIELDKHGHGEELQEYIKLVTG--R--------GTVPNLLV   76 (127)
T ss_dssp             SCSEEEEECTTCHH------HHHHHHHHHHHEEEESCCEEEEGGGSTTHHHHHHHHHHHHS--C--------CSSCEEEE
T ss_pred             cCCEEEEEcCCCcc------HHHHHHHHHHhcccCCCcEEEEecCCCCHHHHHHHHHHHcC--C--------CCcceEEE
Confidence            67899999999999      99999999996   79999999983223 345555666677  3        49999999


Q ss_pred             CCeeeeccCC
Q psy3969          77 EEDYCGVFRY   86 (86)
Q Consensus        77 gd~yiGgyd~   86 (86)
                      ||+++|||||
T Consensus        77 ~G~~IGG~dd   86 (127)
T 3l4n_A           77 NGVSRGGNEE   86 (127)
T ss_dssp             TTEECCCHHH
T ss_pred             CCEEEcCHHH
Confidence            9999999985

>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}

Probab=99.69  E-value=4.2e-17  Score=103.75  Aligned_cols=67  Identities=19%  Similarity=0.320  Sum_probs=60.4

Q ss_pred             CCcEEEEE-----cccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEe
Q psy3969           2 KKPYKISN-----TVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFN   76 (86)
Q Consensus         2 ~~~~~y~s-----s~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFi   76 (86)
                      .++.+|++     +-|+.      |.+|+.+|++++|+|+++||+  .+++.++++.+.+|  .+        ++||||+
T Consensus        17 ~~vvvf~~g~~~~~~C~~------C~~~~~~L~~~~i~~~~vdi~--~~~~~~~~l~~~~g--~~--------~vP~v~i   78 (105)
T 2yan_A           17 ASVMLFMKGNKQEAKCGF------SKQILEILNSTGVEYETFDIL--EDEEVRQGLKAYSN--WP--------TYPQLYV   78 (105)
T ss_dssp             SSEEEEESBCSSSBCTTH------HHHHHHHHHHHTCCCEEEEGG--GCHHHHHHHHHHHT--CC--------SSCEEEE
T ss_pred             CCEEEEEecCCCCCCCcc------HHHHHHHHHHCCCCeEEEECC--CCHHHHHHHHHHHC--CC--------CCCeEEE
Confidence            46788887     78888      999999999999999999999  78999999999887  33        8999999


Q ss_pred             CCeeeeccCC
Q psy3969          77 EEDYCGVFRY   86 (86)
Q Consensus        77 gd~yiGgyd~   86 (86)
                      ||+++||||+
T Consensus        79 ~g~~igg~d~   88 (105)
T 2yan_A           79 KGELVGGLDI   88 (105)
T ss_dssp             TTEEEECHHH
T ss_pred             CCEEEeChHH
Confidence            9999999974

>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0

Probab=99.68  E-value=5.7e-17  Score=105.06  Aligned_cols=69  Identities=14%  Similarity=0.209  Sum_probs=58.2

Q ss_pred             CCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCC-HhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCee
Q psy3969           2 KKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGK-ENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDY   80 (86)
Q Consensus         2 ~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d-~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~y   80 (86)
                      .++.+|+++-|+.      |.+|+.+|+++||+|+++||+...+ ++.++++.+.+|  .        .||||||+||++
T Consensus        17 ~~v~vy~~~~Cp~------C~~ak~~L~~~~i~~~~~dvd~~~~~~~~~~~l~~~~g--~--------~tvP~vfi~g~~   80 (114)
T 3h8q_A           17 SRVVIFSKSYCPH------STRVKELFSSLGVECNVLELDQVDDGARVQEVLSEITN--Q--------KTVPNIFVNKVH   80 (114)
T ss_dssp             CSEEEEECTTCHH------HHHHHHHHHHTTCCCEEEETTTSTTHHHHHHHHHHHHS--C--------CSSCEEEETTEE
T ss_pred             CCEEEEEcCCCCc------HHHHHHHHHHcCCCcEEEEecCCCChHHHHHHHHHHhC--C--------CccCEEEECCEE
Confidence            4688999999999      9999999999999999999983223 345566777777  3        499999999999


Q ss_pred             eeccCC
Q psy3969          81 CGVFRY   86 (86)
Q Consensus        81 iGgyd~   86 (86)
                      +||||+
T Consensus        81 igG~d~   86 (114)
T 3h8q_A           81 VGGCDQ   86 (114)
T ss_dssp             EESHHH
T ss_pred             EeCHHH
Confidence            999984

>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*

Probab=99.66  E-value=1.2e-16  Score=102.19  Aligned_cols=69  Identities=10%  Similarity=0.072  Sum_probs=59.1

Q ss_pred             CCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCC--CCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCe
Q psy3969           2 KKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEP--GKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEED   79 (86)
Q Consensus         2 ~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~--~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~   79 (86)
                      .++.+|+++-|+.      |.+|+.+|+.+||+|+++||+..  .+++.++++.+.+|  .        .+|||||+||+
T Consensus        19 ~~v~vy~~~~Cp~------C~~~~~~L~~~~i~~~~~di~~~~~~~~~~~~~l~~~~g--~--------~tvP~ifi~g~   82 (113)
T 3rhb_A           19 NTVVIYSKTWCSY------CTEVKTLFKRLGVQPLVVELDQLGPQGPQLQKVLERLTG--Q--------HTVPNVFVCGK   82 (113)
T ss_dssp             SSEEEEECTTCHH------HHHHHHHHHHTTCCCEEEEGGGSTTHHHHHHHHHHHHHS--C--------CSSCEEEETTE
T ss_pred             CCEEEEECCCChh------HHHHHHHHHHcCCCCeEEEeecCCCChHHHHHHHHHHhC--C--------CCcCEEEECCE
Confidence            4688999999999      99999999999999999999821  14677788888777  3        38999999999


Q ss_pred             eeeccCC
Q psy3969          80 YCGVFRY   86 (86)
Q Consensus        80 yiGgyd~   86 (86)
                      ++||||+
T Consensus        83 ~igG~~~   89 (113)
T 3rhb_A           83 HIGGCTD   89 (113)
T ss_dssp             EEESHHH
T ss_pred             EEcCcHH
Confidence            9999974

>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*

Probab=99.64  E-value=1.8e-16  Score=95.56  Aligned_cols=74  Identities=15%  Similarity=0.056  Sum_probs=59.2

Q ss_pred             CCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeee
Q psy3969           2 KKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYC   81 (86)
Q Consensus         2 ~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yi   81 (86)
                      .++.+|.++-|+.      |.+|+.+|+.+|++|++++|+...++..+++|.+.+|  ..   ..+..++|+||+||+++
T Consensus         4 m~v~ly~~~~Cp~------C~~~~~~L~~~~i~~~~~~vd~~~~~~~~~el~~~~g--~~---~~~~~~vP~i~i~g~~i   72 (89)
T 3msz_A            4 MKVKIYTRNGCPY------CVWAKQWFEENNIAFDETIIDDYAQRSKFYDEMNQSG--KV---IFPISTVPQIFIDDEHI   72 (89)
T ss_dssp             CCEEEEECTTCHH------HHHHHHHHHHTTCCCEEEECCSHHHHHHHHHHHHTTT--CC---SSCCCSSCEEEETTEEE
T ss_pred             eEEEEEEcCCChh------HHHHHHHHHHcCCCceEEEeecCCChhHHHHHHHHhC--CC---CCCCCccCEEEECCEEE
Confidence            3588999999999      9999999999999999998862234446788988887  30   01235999999999999


Q ss_pred             eccCC
Q psy3969          82 GVFRY   86 (86)
Q Consensus        82 Ggyd~   86 (86)
                      |||++
T Consensus        73 ~g~~~   77 (89)
T 3msz_A           73 GGFTE   77 (89)
T ss_dssp             ESHHH
T ss_pred             eChHH
Confidence            99974

>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*

Probab=99.62  E-value=3.1e-16  Score=104.57  Aligned_cols=68  Identities=10%  Similarity=0.099  Sum_probs=60.3

Q ss_pred             CCCcEEEEEcccCchhchHHHHHH-HHHHHhCC---CceEEEEccCCCC---HhHHHHHHHhcCCCCCCCCCCCCCCCCe
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRV-LMILDSKN---IDYTVIDITEPGK---ENEKEFMQQNSKATPSDSTVKSNPLPPQ   73 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a-~~lL~~k~---I~f~eiDI~~~~d---~~~r~~M~~~~g~~~~~~~~~~~~tvPQ   73 (86)
                      |.++.+|+++-|+.      |.+| +.+|+.++   ++|+++||+  .+   ++.+++|.+.+|  .        .+|||
T Consensus        36 ~~~Vvvy~~~~Cp~------C~~a~k~~L~~~~~~~i~~~~vdvd--~~~~~~~~~~~L~~~~g--~--------~tVP~   97 (129)
T 3ctg_A           36 QKEVFVAAKTYCPY------CKATLSTLFQELNVPKSKALVLELD--EMSNGSEIQDALEEISG--Q--------KTVPN   97 (129)
T ss_dssp             HSSEEEEECTTCHH------HHHHHHHHHTTSCCCGGGEEEEEGG--GSTTHHHHHHHHHHHHS--C--------CSSCE
T ss_pred             CCCEEEEECCCCCc------hHHHHHHHHHhcCccCCCcEEEEcc--ccCCHHHHHHHHHHHhC--C--------CCCCE
Confidence            35789999999999      9999 99999999   999999998  44   467889999997  3        38999


Q ss_pred             EEeCCeeeeccCC
Q psy3969          74 IFNEEDYCGVFRY   86 (86)
Q Consensus        74 IFigd~yiGgyd~   86 (86)
                      ||+||+++||||+
T Consensus        98 vfi~g~~igG~d~  110 (129)
T 3ctg_A           98 VYINGKHIGGNSD  110 (129)
T ss_dssp             EEETTEEEESHHH
T ss_pred             EEECCEEEcCHHH
Confidence            9999999999974

>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}

Probab=99.61  E-value=1.5e-15  Score=93.13  Aligned_cols=68  Identities=21%  Similarity=0.149  Sum_probs=61.4

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCee
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDY   80 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~y   80 (86)
                      |.++.+|+++-|+.      |.+|+.+|+.++|+|+++||+  .+++.++++.+..|  .+        ++|+||+||++
T Consensus         5 m~~v~ly~~~~C~~------C~~~~~~L~~~~i~~~~~di~--~~~~~~~~l~~~~~--~~--------~vP~l~~~g~~   66 (92)
T 2khp_A            5 MVDVIIYTRPGCPY------CARAKALLARKGAEFNEIDAS--ATPELRAEMQERSG--RN--------TFPQIFIGSVH   66 (92)
T ss_dssp             CCCEEEEECTTCHH------HHHHHHHHHHTTCCCEEEEST--TSHHHHHHHHHHHT--SS--------CCCEEEETTEE
T ss_pred             cccEEEEECCCChh------HHHHHHHHHHcCCCcEEEECC--CCHHHHHHHHHHhC--CC--------CcCEEEECCEE
Confidence            67889999999998      999999999999999999999  78898999998886  33        79999999999


Q ss_pred             eeccCC
Q psy3969          81 CGVFRY   86 (86)
Q Consensus        81 iGgyd~   86 (86)
                      +|||++
T Consensus        67 i~g~~~   72 (92)
T 2khp_A           67 VGGCDD   72 (92)
T ss_dssp             EESHHH
T ss_pred             EcCHHH
Confidence            999863

>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*

Probab=99.58  E-value=1.6e-15  Score=99.00  Aligned_cols=68  Identities=9%  Similarity=0.051  Sum_probs=59.9

Q ss_pred             CCCcEEEEEcccCchhchHHHHHH-HHHHHhCC---CceEEEEccCCCC---HhHHHHHHHhcCCCCCCCCCCCCCCCCe
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRV-LMILDSKN---IDYTVIDITEPGK---ENEKEFMQQNSKATPSDSTVKSNPLPPQ   73 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a-~~lL~~k~---I~f~eiDI~~~~d---~~~r~~M~~~~g~~~~~~~~~~~~tvPQ   73 (86)
                      |.++.+|+++-|+.      |.+| +.+|++++   |+|+++||+  .+   ++.+++|.+.+|  .+        +|||
T Consensus        24 ~~~Vvvf~~~~Cp~------C~~alk~~L~~~~~~~i~~~~vdid--~~~~~~~~~~~l~~~~g--~~--------tvP~   85 (118)
T 3c1r_A           24 ENEIFVASKTYCPY------CHAALNTLFEKLKVPRSKVLVLQLN--DMKEGADIQAALYEING--QR--------TVPN   85 (118)
T ss_dssp             HSSEEEEECSSCHH------HHHHHHHHHTTSCCCGGGEEEEEGG--GSTTHHHHHHHHHHHHS--CC--------SSCE
T ss_pred             cCcEEEEEcCCCcC------HHHHHHHHHHHcCCCCCCeEEEECc--cCCChHHHHHHHHHHhC--CC--------CcCE
Confidence            35788999999999      9999 99999999   999999998  45   357888999887  33        8999


Q ss_pred             EEeCCeeeeccCC
Q psy3969          74 IFNEEDYCGVFRY   86 (86)
Q Consensus        74 IFigd~yiGgyd~   86 (86)
                      ||+||+++||||+
T Consensus        86 vfi~g~~igG~d~   98 (118)
T 3c1r_A           86 IYINGKHIGGNDD   98 (118)
T ss_dssp             EEETTEEEESHHH
T ss_pred             EEECCEEEEcHHH
Confidence            9999999999974

>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}

Probab=99.56  E-value=1.2e-14  Score=89.10  Aligned_cols=68  Identities=18%  Similarity=0.142  Sum_probs=58.2

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhH----HHHHHHhcCCCCCCCCCCCCCCCCeEEe
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENE----KEFMQQNSKATPSDSTVKSNPLPPQIFN   76 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~----r~~M~~~~g~~~~~~~~~~~~tvPQIFi   76 (86)
                      |.++.+|.++-|++      |.+|+.+|+.+|++|+.+||+. .+++.    +.++.+..|  .        .++|+||+
T Consensus        11 M~~v~ly~~~~Cp~------C~~~~~~L~~~gi~~~~~~v~~-~~~~~~~~~~~~l~~~~g--~--------~~vP~l~~   73 (92)
T 3ic4_A           11 MAEVLMYGLSTCPH------CKRTLEFLKREGVDFEVIWIDK-LEGEERKKVIEKVHSISG--S--------YSVPVVVK   73 (92)
T ss_dssp             CSSSEEEECTTCHH------HHHHHHHHHHHTCCCEEEEGGG-CCHHHHHHHHHHHHHHHS--S--------SCSCEEEE
T ss_pred             CceEEEEECCCChH------HHHHHHHHHHcCCCcEEEEeee-CCccchHHHHHHHHHhcC--C--------CCcCEEEE
Confidence            78899999999999      9999999999999999999973 23333    377777776  2        38999999


Q ss_pred             CCeeeeccC
Q psy3969          77 EEDYCGVFR   85 (86)
Q Consensus        77 gd~yiGgyd   85 (86)
                      ||+++|||+
T Consensus        74 ~g~~i~G~~   82 (92)
T 3ic4_A           74 GDKHVLGYN   82 (92)
T ss_dssp             TTEEEESCC
T ss_pred             CCEEEeCCC
Confidence            999999997

>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*

Probab=99.55  E-value=6.8e-15  Score=87.63  Aligned_cols=66  Identities=21%  Similarity=0.292  Sum_probs=59.0

Q ss_pred             CCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeee
Q psy3969           2 KKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYC   81 (86)
Q Consensus         2 ~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yi   81 (86)
                      +++.+|+++-|++      |.+|+.+|+.+||+|+++||+  .+++.++++.+..|  .+        ++|+||+||+++
T Consensus         1 ~~i~~y~~~~C~~------C~~~~~~l~~~~i~~~~~~i~--~~~~~~~~~~~~~~--~~--------~vP~l~~~g~~i   62 (82)
T 1fov_A            1 ANVEIYTKETCPY------CHRAKALLSSKGVSFQELPID--GNAAKREEMIKRSG--RT--------TVPQIFIDAQHI   62 (82)
T ss_dssp             CCEEEEECSSCHH------HHHHHHHHHHHTCCCEEEECT--TCSHHHHHHHHHHS--SC--------CSCEEEETTEEE
T ss_pred             CcEEEEECCCChh------HHHHHHHHHHCCCCcEEEECC--CCHHHHHHHHHHhC--CC--------CcCEEEECCEEE
Confidence            3678899999988      999999999999999999998  68888888888887  33        899999999999


Q ss_pred             eccC
Q psy3969          82 GVFR   85 (86)
Q Consensus        82 Ggyd   85 (86)
                      |||+
T Consensus        63 ~g~~   66 (82)
T 1fov_A           63 GGYD   66 (82)
T ss_dssp             ESHH
T ss_pred             eCHH
Confidence            9986

>2jad_A Yellow fluorescent protein glutaredoxin fusion protein; electron transport, redox- active center, yeast, GRX1P, transport; HET: PIA; 2.7A {Aequorea victoria}

Probab=99.53  E-value=3.4e-15  Score=116.13  Aligned_cols=70  Identities=9%  Similarity=0.064  Sum_probs=60.2

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHH-HHHhCCCceEEEEccC----CCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEE
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLM-ILDSKNIDYTVIDITE----PGKENEKEFMQQNSKATPSDSTVKSNPLPPQIF   75 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~-lL~~k~I~f~eiDI~~----~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIF   75 (86)
                      +.++.||.++-|+.      |.+|++ ||+++||+|+++||-+    ..+++.+++|.+.+|  ++        ||||||
T Consensus       260 ~~~VvVYsk~~CPy------C~~Ak~~LL~~~gV~y~eidVlEld~~~~~~e~~~~L~~~tG--~~--------TVPqVF  323 (362)
T 2jad_A          260 ENEIFVASKTYCPY------SHAALNTLFEKLKVPRSKVLVLQLNDMKEGADIQAALYEING--QR--------TVPNIY  323 (362)
T ss_dssp             TCSEEEEECTTCHH------HHHHHHHHHTTTCCCTTTEEEEEGGGSTTHHHHHHHHHHHHC--CC--------SSCEEE
T ss_pred             cCCEEEEEcCCCcc------hHHHHHHHHHHcCCCcceEEEEEeccccCCHHHHHHHHHHHC--CC--------CcCEEE
Confidence            35789999999999      999997 9999999998887720    146889999999998  44        999999


Q ss_pred             eCCeeeeccCC
Q psy3969          76 NEEDYCGVFRY   86 (86)
Q Consensus        76 igd~yiGgyd~   86 (86)
                      |||+++|||||
T Consensus       324 I~Gk~IGG~Dd  334 (362)
T 2jad_A          324 INGKHIGGNDD  334 (362)
T ss_dssp             ETTEEEESHHH
T ss_pred             ECCEEEEChHH
Confidence            99999999984

>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}

Probab=99.52  E-value=1.1e-14  Score=89.09  Aligned_cols=66  Identities=26%  Similarity=0.223  Sum_probs=59.2

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhc-CCCCCCCCCCCCCCCCeEEeCCe
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNS-KATPSDSTVKSNPLPPQIFNEED   79 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~-g~~~~~~~~~~~~tvPQIFigd~   79 (86)
                      |.++.+|+++-|+.      |.+|+.+|+.++|+|+++||+    ++.++++.++. |  .        .++|+||+||+
T Consensus         5 m~~v~~y~~~~C~~------C~~~~~~L~~~~i~~~~vdv~----~~~~~~l~~~~~~--~--------~~vP~l~~~g~   64 (89)
T 2klx_A            5 MKEIILYTRPNCPY------CKRARDLLDKKGVKYTDIDAS----TSLRQEMVQRANG--R--------NTFPQIFIGDY   64 (89)
T ss_dssp             CCCEEEESCSCCTT------THHHHHHHHHHTCCEEEECSC----HHHHHHHHHHHHS--S--------CCSCEEEETTE
T ss_pred             cceEEEEECCCChh------HHHHHHHHHHcCCCcEEEECC----HHHHHHHHHHhCC--C--------CCcCEEEECCE
Confidence            67889999999999      999999999999999999996    77788898888 6  3        38999999999


Q ss_pred             eeeccCC
Q psy3969          80 YCGVFRY   86 (86)
Q Consensus        80 yiGgyd~   86 (86)
                      ++|||++
T Consensus        65 ~i~g~~~   71 (89)
T 2klx_A           65 HVGGCDD   71 (89)
T ss_dssp             ECCSHHH
T ss_pred             EEeChHH
Confidence            9999863

>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*

Probab=99.51  E-value=3e-14  Score=88.89  Aligned_cols=67  Identities=15%  Similarity=0.208  Sum_probs=58.9

Q ss_pred             CCcEEEEEcccCchhchHHHHHHHHHHHhCCCc---eEEEEccCCCC---HhHHHHHHHhcCCCCCCCCCCCCCCCCeEE
Q psy3969           2 KKPYKISNTVRGVKGVKKRQQRVLMILDSKNID---YTVIDITEPGK---ENEKEFMQQNSKATPSDSTVKSNPLPPQIF   75 (86)
Q Consensus         2 ~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~---f~eiDI~~~~d---~~~r~~M~~~~g~~~~~~~~~~~~tvPQIF   75 (86)
                      .++.+|+++-|+.      |.+|+.+|+.++++   |+.+||+  .+   ++.++++.+..|  .+        ++|+||
T Consensus        12 ~~v~~f~~~~C~~------C~~~~~~L~~~~~~~~~~~~vdi~--~~~~~~~~~~~l~~~~g--~~--------~vP~i~   73 (105)
T 1kte_A           12 GKVVVFIKPTCPF------CRKTQELLSQLPFKEGLLEFVDIT--ATSDTNEIQDYLQQLTG--AR--------TVPRVF   73 (105)
T ss_dssp             TCEEEEECSSCHH------HHHHHHHHHHSCBCTTSEEEEEGG--GSTTHHHHHHHHHHHHS--CC--------CSCEEE
T ss_pred             CCEEEEEcCCCHh------HHHHHHHHHHcCCCCCccEEEEcc--CCCCHHHHHHHHHHHhC--CC--------CcCeEE
Confidence            4578999999999      99999999999999   9999998  55   577888888887  33        899999


Q ss_pred             eCCeeeeccCC
Q psy3969          76 NEEDYCGVFRY   86 (86)
Q Consensus        76 igd~yiGgyd~   86 (86)
                      ++|+++||||+
T Consensus        74 ~~g~~i~g~~~   84 (105)
T 1kte_A           74 IGKECIGGCTD   84 (105)
T ss_dssp             ETTEEEESHHH
T ss_pred             ECCEEEeccHH
Confidence            99999999873

>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}

Probab=99.50  E-value=4.1e-14  Score=89.52  Aligned_cols=67  Identities=10%  Similarity=0.035  Sum_probs=55.5

Q ss_pred             CcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHH----hcCCCCCCCCCCCCCCCCeEEeCC
Q psy3969           3 KPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQ----NSKATPSDSTVKSNPLPPQIFNEE   78 (86)
Q Consensus         3 ~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~----~~g~~~~~~~~~~~~tvPQIFigd   78 (86)
                      ++.+|+++-|+.      |.+|+.+|+.+|++|+++||+. .+++.+.++.+    ..|          ..+||+||++|
T Consensus        23 ~v~ly~~~~Cp~------C~~ak~~L~~~~i~y~~vdI~~-~~~~~~~~~~~~l~~~~g----------~~~vP~l~i~~   85 (103)
T 3nzn_A           23 KVIMYGLSTCVW------CKKTKKLLTDLGVDFDYVYVDR-LEGKEEEEAVEEVRRFNP----------SVSFPTTIIND   85 (103)
T ss_dssp             CEEEEECSSCHH------HHHHHHHHHHHTBCEEEEEGGG-CCHHHHHHHHHHHHHHCT----------TCCSCEEEETT
T ss_pred             eEEEEcCCCCch------HHHHHHHHHHcCCCcEEEEeec-cCcccHHHHHHHHHHhCC----------CCccCEEEECC
Confidence            678999999999      9999999999999999999982 24555555553    334          34999999999


Q ss_pred             -eeeeccCC
Q psy3969          79 -DYCGVFRY   86 (86)
Q Consensus        79 -~yiGgyd~   86 (86)
                       +++||||+
T Consensus        86 ~~~igg~~~   94 (103)
T 3nzn_A           86 EKAIVGFKE   94 (103)
T ss_dssp             TEEEESCCH
T ss_pred             CEEEEcCCH
Confidence             99999984

>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10

Probab=99.49  E-value=2.5e-14  Score=100.91  Aligned_cols=66  Identities=12%  Similarity=0.055  Sum_probs=58.1

Q ss_pred             CCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeee
Q psy3969           2 KKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYC   81 (86)
Q Consensus         2 ~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yi   81 (86)
                      .++.+|.++-|+.      |.+|+.+|+.+||+|+++||+  .+++ +++|.+..|  .+        +|||||+||+++
T Consensus       170 ~~i~ly~~~~Cp~------C~~a~~~L~~~~i~~~~~~i~--~~~~-~~~l~~~~g--~~--------~vP~~~~~g~~i  230 (241)
T 1nm3_A          170 ESISIFTKPGCPF------CAKAKQLLHDKGLSFEEIILG--HDAT-IVSVRAVSG--RT--------TVPQVFIGGKHI  230 (241)
T ss_dssp             CCEEEEECSSCHH------HHHHHHHHHHHTCCCEEEETT--TTCC-HHHHHHHTC--CS--------SSCEEEETTEEE
T ss_pred             ceEEEEECCCChH------HHHHHHHHHHcCCceEEEECC--CchH-HHHHHHHhC--CC--------CcCEEEECCEEE
Confidence            4678999999999      999999999999999999998  5544 588888887  33        899999999999


Q ss_pred             eccCC
Q psy3969          82 GVFRY   86 (86)
Q Consensus        82 Ggyd~   86 (86)
                      ||||+
T Consensus       231 ~g~~~  235 (241)
T 1nm3_A          231 GGSDD  235 (241)
T ss_dssp             ESHHH
T ss_pred             ECHHH
Confidence            99974

>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B

Probab=99.49  E-value=3.6e-14  Score=91.21  Aligned_cols=66  Identities=18%  Similarity=0.271  Sum_probs=58.9

Q ss_pred             CCcEEEEEcccCchhchHHHHHHHHHHHhCCCc---eEEEEccCCCCH---hHHHHHHHhcCCCCCCCCCCCCCCCCeEE
Q psy3969           2 KKPYKISNTVRGVKGVKKRQQRVLMILDSKNID---YTVIDITEPGKE---NEKEFMQQNSKATPSDSTVKSNPLPPQIF   75 (86)
Q Consensus         2 ~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~---f~eiDI~~~~d~---~~r~~M~~~~g~~~~~~~~~~~~tvPQIF   75 (86)
                      .++.+|+++-|+.      |.+|+.+|+.++++   |+++||+  .++   +.++++.+..|  .+        ++|+||
T Consensus        19 ~~vv~f~~~~Cp~------C~~~~~~L~~~~~~~~~~~~vdi~--~~~~~~~~~~~l~~~~g--~~--------~vP~v~   80 (114)
T 2hze_A           19 NKVTIFVKYTCPF------CRNALDILNKFSFKRGAYEIVDIK--EFKPENELRDYFEQITG--GK--------TVPRIF   80 (114)
T ss_dssp             TCEEEEECTTCHH------HHHHHHHHTTSCBCTTSEEEEEGG--GSSSHHHHHHHHHHHHS--CC--------SSCEEE
T ss_pred             CCEEEEEeCCChh------HHHHHHHHHHcCCCcCceEEEEcc--CCCChHHHHHHHHHHhC--CC--------CcCEEE
Confidence            4678999999999      99999999999999   9999998  565   77888988887  33        899999


Q ss_pred             eCCeeeeccC
Q psy3969          76 NEEDYCGVFR   85 (86)
Q Consensus        76 igd~yiGgyd   85 (86)
                      +||+++|||+
T Consensus        81 i~g~~igg~~   90 (114)
T 2hze_A           81 FGKTSIGGYS   90 (114)
T ss_dssp             ETTEEEESHH
T ss_pred             ECCEEEeCcH
Confidence            9999999986

>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A

Probab=99.43  E-value=4.7e-14  Score=84.44  Aligned_cols=68  Identities=19%  Similarity=0.230  Sum_probs=58.0

Q ss_pred             CcEEEEEcccCchhchHHHHHHHHHHHh-----CCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeC
Q psy3969           3 KPYKISNTVRGVKGVKKRQQRVLMILDS-----KNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNE   77 (86)
Q Consensus         3 ~~~~y~ss~sgn~~vK~~q~~a~~lL~~-----k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFig   77 (86)
                      ++.+|+++-|+.      |.+++.+|+.     ++|+|.++||+  .+++.++++.++.|.        +..++|+||+|
T Consensus         2 ~v~~f~~~~C~~------C~~~~~~l~~l~~~~~~i~~~~vdi~--~~~~~~~~l~~~~~~--------~~~~vP~i~~~   65 (85)
T 1ego_A            2 QTVIFGRSGCPY------CVRAKDLAEKLSNERDDFQYQYVDIR--AEGITKEDLQQKAGK--------PVETVPQIFVD   65 (85)
T ss_dssp             EEEEECCTTSTH------HHHHHHHHHHHHHHHSSCEEEEECHH--HHTCCSHHHHHHTCC--------CSCCSCEEEET
T ss_pred             EEEEEeCCCCCC------HHHHHHHHHHHHhcCCCceEEEEecc--cChHHHHHHHHHhCC--------CCceeCeEEEC
Confidence            578899999999      9999999999     89999999998  566666778887761        23589999999


Q ss_pred             CeeeeccCC
Q psy3969          78 EDYCGVFRY   86 (86)
Q Consensus        78 d~yiGgyd~   86 (86)
                      |+++||+++
T Consensus        66 g~~i~~~~~   74 (85)
T 1ego_A           66 QQHIGGYTD   74 (85)
T ss_dssp             TEEEESSHH
T ss_pred             CEEEECHHH
Confidence            999999864

>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.43  E-value=2.2e-13  Score=89.98  Aligned_cols=66  Identities=14%  Similarity=0.157  Sum_probs=58.5

Q ss_pred             CcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCC---HhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCe
Q psy3969           3 KPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGK---ENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEED   79 (86)
Q Consensus         3 ~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d---~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~   79 (86)
                      ++.+|+++-|+.      |.+|+.+|+.++++|+++||+  .+   ++.++++.+..|  .+        ++|+||+||+
T Consensus        28 ~vvvf~~~~Cp~------C~~~~~~L~~~~i~~~~vdid--~~~~~~~~~~~l~~~~g--~~--------~vP~l~i~G~   89 (130)
T 2cq9_A           28 CVVIFSKTSCSY------CTMAKKLFHDMNVNYKVVELD--LLEYGNQFQDALYKMTG--ER--------TVPRIFVNGT   89 (130)
T ss_dssp             SEEEEECSSCSH------HHHHHHHHHHHTCCCEEEETT--TSTTHHHHHHHHHHHHS--SC--------CSSEEEETTE
T ss_pred             cEEEEEcCCChH------HHHHHHHHHHcCCCcEEEECc--CCcCcHHHHHHHHHHhC--CC--------CcCEEEECCE
Confidence            578999999999      999999999999999999998  55   677788888887  33        8999999999


Q ss_pred             eeeccCC
Q psy3969          80 YCGVFRY   86 (86)
Q Consensus        80 yiGgyd~   86 (86)
                      ++|||++
T Consensus        90 ~igg~~~   96 (130)
T 2cq9_A           90 FIGGATD   96 (130)
T ss_dssp             EEEEHHH
T ss_pred             EEcChHH
Confidence            9999863

>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*

Probab=99.40  E-value=2.9e-13  Score=92.01  Aligned_cols=65  Identities=14%  Similarity=0.174  Sum_probs=58.1

Q ss_pred             CcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCC---HhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCe
Q psy3969           3 KPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGK---ENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEED   79 (86)
Q Consensus         3 ~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d---~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~   79 (86)
                      ++.+|+++-|+.      |.+|+.+|+.++++|+++||+  .+   ++.++++.+..|  .+        ++|+||+||+
T Consensus        50 ~Vvvf~~~~Cp~------C~~~k~~L~~~~i~~~~vdId--~~~~~~~~~~~L~~~~g--~~--------tvP~ifi~G~  111 (146)
T 2ht9_A           50 CVVIFSKTSCSY------CTMAKKLFHDMNVNYKVVELD--LLEYGNQFQDALYKMTG--ER--------TVPRIFVNGT  111 (146)
T ss_dssp             SEEEEECTTCHH------HHHHHHHHHHHTCCCEEEEGG--GCTTHHHHHHHHHHHHS--CC--------CSCEEEETTE
T ss_pred             CEEEEECCCChh------HHHHHHHHHHcCCCeEEEECc--cCcCCHHHHHHHHHHhC--CC--------CcCeEEECCE
Confidence            578899999999      999999999999999999998  45   677788888887  33        8999999999


Q ss_pred             eeeccC
Q psy3969          80 YCGVFR   85 (86)
Q Consensus        80 yiGgyd   85 (86)
                      ++|||+
T Consensus       112 ~igG~d  117 (146)
T 2ht9_A          112 FIGGAT  117 (146)
T ss_dssp             EEESHH
T ss_pred             EEeCch
Confidence            999986

>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1

Probab=99.38  E-value=2e-12  Score=75.44  Aligned_cols=64  Identities=13%  Similarity=0.157  Sum_probs=55.9

Q ss_pred             CcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeeee
Q psy3969           3 KPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCG   82 (86)
Q Consensus         3 ~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yiG   82 (86)
                      ++.+|+++-|++      |.+++.+|+.+||+|+.+||+  .+++.++++.+ .|          ..++|++|+||+++|
T Consensus         2 ~i~~y~~~~C~~------C~~~~~~l~~~~i~~~~~di~--~~~~~~~~~~~-~~----------~~~vP~l~~~g~~~~   62 (75)
T 1r7h_A            2 SITLYTKPACVQ------CTATKKALDRAGLAYNTVDIS--LDDEARDYVMA-LG----------YVQAPVVEVDGEHWS   62 (75)
T ss_dssp             CEEEEECTTCHH------HHHHHHHHHHTTCCCEEEETT--TCHHHHHHHHH-TT----------CBCCCEEEETTEEEE
T ss_pred             eEEEEeCCCChH------HHHHHHHHHHcCCCcEEEECC--CCHHHHHHHHH-cC----------CCccCEEEECCeEEc
Confidence            478899999999      999999999999999999999  78888887743 44          237999999999999


Q ss_pred             ccC
Q psy3969          83 VFR   85 (86)
Q Consensus        83 gyd   85 (86)
                      ||+
T Consensus        63 g~~   65 (75)
T 1r7h_A           63 GFR   65 (75)
T ss_dssp             SCC
T ss_pred             CCC
Confidence            986

>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1

Probab=99.38  E-value=2.3e-12  Score=76.71  Aligned_cols=64  Identities=9%  Similarity=0.103  Sum_probs=56.3

Q ss_pred             CcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeeee
Q psy3969           3 KPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCG   82 (86)
Q Consensus         3 ~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yiG   82 (86)
                      ++.+|+++-|+.      |.+++.+|+.++|+|+.+||+  .+++.++++.+ .|  .        .++|++|+||+++|
T Consensus         2 ~v~~f~~~~C~~------C~~~~~~l~~~~i~~~~vdi~--~~~~~~~~~~~-~g--~--------~~vP~~~~~g~~~~   62 (81)
T 1h75_A            2 RITIYTRNDCVQ------CHATKRAMENRGFDFEMINVD--RVPEAAEALRA-QG--F--------RQLPVVIAGDLSWS   62 (81)
T ss_dssp             CEEEEECTTCHH------HHHHHHHHHHTTCCCEEEETT--TCHHHHHHHHH-TT--C--------CSSCEEEETTEEEE
T ss_pred             EEEEEcCCCChh------HHHHHHHHHHCCCCeEEEECC--CCHHHHHHHHH-hC--C--------CccCEEEECCEEEe
Confidence            578999999999      999999999999999999998  78888877764 44  2        37999999999999


Q ss_pred             ccC
Q psy3969          83 VFR   85 (86)
Q Consensus        83 gyd   85 (86)
                      ||+
T Consensus        63 g~~   65 (81)
T 1h75_A           63 GFR   65 (81)
T ss_dssp             SCC
T ss_pred             cCC
Confidence            986

>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*

Probab=99.33  E-value=8.5e-13  Score=103.71  Aligned_cols=70  Identities=17%  Similarity=0.171  Sum_probs=59.9

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCC-HhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCe
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGK-ENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEED   79 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d-~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~   79 (86)
                      |.++.+|.++-|++      |.+|+++|++++++|+++||+...+ ++.+++|.+.+|  .        .++||||+|++
T Consensus        17 ~~~v~vy~~~~Cp~------C~~~k~~L~~~~i~~~~~dv~~~~~~~~~~~~l~~~~g--~--------~tvP~v~i~g~   80 (598)
T 2x8g_A           17 SAAVILFSKTTCPY------CKKVKDVLAEAKIKHATIELDQLSNGSAIQKCLASFSK--I--------ETVPQMFVRGK   80 (598)
T ss_dssp             HCSEEEEECTTCHH------HHHHHHHHHHTTCCCEEEEGGGSTTHHHHHHHTHHHHS--C--------CCSCEEEETTE
T ss_pred             cCCEEEEECCCChh------HHHHHHHHHHCCCCcEEEEcccCcchHHHHHHHHHHhC--C--------ceeCEEEECCE
Confidence            35789999999999      9999999999999999999972112 677888888787  3        39999999999


Q ss_pred             eeeccCC
Q psy3969          80 YCGVFRY   86 (86)
Q Consensus        80 yiGgyd~   86 (86)
                      ++||||+
T Consensus        81 ~igG~~~   87 (598)
T 2x8g_A           81 FIGDSQT   87 (598)
T ss_dssp             EEECHHH
T ss_pred             EEEeeeh
Confidence            9999974

>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19

Probab=99.02  E-value=1.1e-10  Score=87.70  Aligned_cols=66  Identities=8%  Similarity=-0.096  Sum_probs=48.9

Q ss_pred             CCcEEEEEcccCchhchHHHHHHHHHHHhC----CC---ceE--EEE--ccCCCCHh------HHHHHHHhc-CCCCCCC
Q psy3969           2 KKPYKISNTVRGVKGVKKRQQRVLMILDSK----NI---DYT--VID--ITEPGKEN------EKEFMQQNS-KATPSDS   63 (86)
Q Consensus         2 ~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k----~I---~f~--eiD--I~~~~d~~------~r~~M~~~~-g~~~~~~   63 (86)
                      .++++|.|.-|++      |.+|+++|+++    ++   +|+  ++|  ..  .|+.      .|++|..+. |  ++  
T Consensus        44 ~~VelyTs~gCp~------C~~Ak~lL~~~~~~~~vi~l~~~v~~~dylgw--~D~~a~~~~~~r~~~~~~~~G--~~--  111 (270)
T 2axo_A           44 GVVELFTSQGCAS------CPPADEALRKMIQKGDVVGLSYHVDYWNYLGW--TDSLASKENTERQYGYMRALG--RN--  111 (270)
T ss_dssp             CEEEEEECTTCTT------CHHHHHHHHHHHHHTSSEEEEEECSTTCSSSS--CCTTCCHHHHHHHHHHHHHTT--CS--
T ss_pred             cEEEEEeCCCCCC------hHHHHHHHHHhhccCCeeeEEEEEEEeccccc--ccchhhhhhhHHHHHHHHHhC--CC--
Confidence            5689999999999      99999999999    76   565  223  11  3333      344444444 5  33  


Q ss_pred             CCCCCCCC--CeEEeCCe-eeeccC
Q psy3969          64 TVKSNPLP--PQIFNEED-YCGVFR   85 (86)
Q Consensus        64 ~~~~~~tv--PQIFigd~-yiGgyd   85 (86)
                            +|  |||||||+ |+||||
T Consensus       112 ------tVyTPqI~Ing~~~v~G~d  130 (270)
T 2axo_A          112 ------GVYTPQAILNGRDHVKGAD  130 (270)
T ss_dssp             ------CCCSSEEEETTTEEEETTC
T ss_pred             ------cccCCEEEECCEEeecCCC
Confidence                  88  99999999 899997

>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}

Probab=98.89  E-value=1.1e-09  Score=65.56  Aligned_cols=64  Identities=5%  Similarity=-0.034  Sum_probs=51.3

Q ss_pred             CCcEEEEEcccCchhchHHHHHHHH----HHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeC
Q psy3969           2 KKPYKISNTVRGVKGVKKRQQRVLM----ILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNE   77 (86)
Q Consensus         2 ~~~~~y~ss~sgn~~vK~~q~~a~~----lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFig   77 (86)
                      .++.+|+++-|+.      |.+++.    +|++.+++|+.+||+  .+++..+ +.++.|  .+        ++|+||+|
T Consensus         2 ~~~~~f~~~~C~~------C~~~~~~l~~~~~~~~~~~~~~~v~--~~~~~~~-~~~~~g--v~--------~vPt~~i~   62 (80)
T 2k8s_A            2 ASKAIFYHAGCPV------CVSAEQAVANAIDPSKYTVEIVHLG--TDKARIA-EAEKAG--VK--------SVPALVID   62 (80)
T ss_dssp             CEEEEEEECSCHH------HHHHHHHHHHHSCTTTEEEEEEETT--TCSSTHH-HHHHHT--CC--------EEEEEEET
T ss_pred             cceEEEeCCCCCc------hHHHHHHHHHHHHhcCCeEEEEEec--CChhhHH-HHHHcC--CC--------cCCEEEEC
Confidence            4678999999999      999999    888899999999998  4433333 445566  33        79999999


Q ss_pred             Ce--eeecc
Q psy3969          78 ED--YCGVF   84 (86)
Q Consensus        78 d~--yiGgy   84 (86)
                      |+  ++|+.
T Consensus        63 g~~~~~G~~   71 (80)
T 2k8s_A           63 GAAFHINFG   71 (80)
T ss_dssp             TEEEEEEEE
T ss_pred             CEEEEeccC
Confidence            99  88875

>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}

Probab=98.86  E-value=5.4e-09  Score=68.51  Aligned_cols=62  Identities=16%  Similarity=0.139  Sum_probs=52.1

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHh----CCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeE--
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDS----KNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQI--   74 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~----k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQI--   74 (86)
                      |.++.+|++.-|+.      |.+|+.+|++    ++|+|++|||+  .++++.+    +.|           ..+|+|  
T Consensus        29 m~~vv~y~~~~C~~------C~~a~~~L~~l~~e~~i~~~~vDId--~d~~l~~----~yg-----------v~VP~l~~   85 (107)
T 2fgx_A           29 PRKLVVYGREGCHL------CEEMIASLRVLQKKSWFELEVINID--GNEHLTR----LYN-----------DRVPVLFA   85 (107)
T ss_dssp             CCCEEEEECSSCHH------HHHHHHHHHHHHHHSCCCCEEEETT--TCHHHHH----HST-----------TSCSEEEE
T ss_pred             ccEEEEEeCCCChh------HHHHHHHHHHHHHhcCCeEEEEECC--CCHHHHH----HhC-----------CCCceEEE
Confidence            56789999999999      9999999999    89999999999  6887543    445           149999  


Q ss_pred             EeCCeee--eccC
Q psy3969          75 FNEEDYC--GVFR   85 (86)
Q Consensus        75 Figd~yi--Ggyd   85 (86)
                      |+||+.+  |.++
T Consensus        86 ~~dG~~v~~g~~~   98 (107)
T 2fgx_A           86 VNEDKELCHYFLD   98 (107)
T ss_dssp             TTTTEEEECSSCC
T ss_pred             EECCEEEEecCCC
Confidence            9999987  6665

>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1

Probab=98.85  E-value=3.8e-09  Score=66.65  Aligned_cols=63  Identities=10%  Similarity=-0.009  Sum_probs=51.0

Q ss_pred             CCcEEEEEcccCchhchHHHHHHHHHHH--hCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCe
Q psy3969           2 KKPYKISNTVRGVKGVKKRQQRVLMILD--SKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEED   79 (86)
Q Consensus         2 ~~~~~y~ss~sgn~~vK~~q~~a~~lL~--~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~   79 (86)
                      ..+.+|+++-|+.      |.+|+.+|+  +++|+|.+|||++   ++. .++.++.|           .++|+||++|+
T Consensus        17 ~~v~~f~~~~C~~------C~~~~~~L~~l~~~i~~~~vdi~~---~~~-~el~~~~g-----------~~vP~l~~~g~   75 (100)
T 1wjk_A           17 PVLTLFTKAPCPL------CDEAKEVLQPYKDRFILQEVDITL---PEN-STWYERYK-----------FDIPVFHLNGQ   75 (100)
T ss_dssp             CEEEEEECSSCHH------HHHHHHHTSTTSSSSEEEEEETTS---STT-HHHHHHSS-----------SSCSEEEESSS
T ss_pred             CEEEEEeCCCCcc------hHHHHHHHHHhhhCCeEEEEECCC---cch-HHHHHHHC-----------CCCCEEEECCE
Confidence            3567888888999      999999999  8899999999982   222 55666665           26999999999


Q ss_pred             e--eeccC
Q psy3969          80 Y--CGVFR   85 (86)
Q Consensus        80 y--iGgyd   85 (86)
                      .  .|||+
T Consensus        76 ~~~~~g~~   83 (100)
T 1wjk_A           76 FLMMHRVN   83 (100)
T ss_dssp             EEEESSCC
T ss_pred             EEEecCCC
Confidence            8  78886

>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A

Probab=98.84  E-value=6.3e-09  Score=64.95  Aligned_cols=66  Identities=17%  Similarity=0.197  Sum_probs=54.5

Q ss_pred             CCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHh---HHHHHHHhcCCCCCCCCCCCCCCCCeEEeCC
Q psy3969           2 KKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKEN---EKEFMQQNSKATPSDSTVKSNPLPPQIFNEE   78 (86)
Q Consensus         2 ~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~---~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd   78 (86)
                      +.+.+|+++-|+.      |.+++.+|+..+++|..+||+  .+++   .+.++.++.|  .+        .+|++|++|
T Consensus        20 ~~vv~f~a~~C~~------C~~~~~~l~~~~~~~~~v~v~--~~~~~~~~~~~l~~~~~--v~--------~~Pt~~~~g   81 (116)
T 2e7p_A           20 APVVVFSKTYCGY------CNRVKQLLTQVGASYKVVELD--ELSDGSQLQSALAHWTG--RG--------TVPNVFIGG   81 (116)
T ss_dssp             SSEEEEECTTCHH------HHHHHHHHHHHTCCCEEEEGG--GSTTHHHHHHHHHHHHS--CC--------SSCEEEETT
T ss_pred             CCEEEEECCCChh------HHHHHHHHHHcCCCeEEEEcc--CCCChHHHHHHHHHHhC--CC--------CcCEEEECC
Confidence            4567899999999      999999999999999999997  4443   3456777776  33        799999999


Q ss_pred             eeeeccC
Q psy3969          79 DYCGVFR   85 (86)
Q Consensus        79 ~yiGgyd   85 (86)
                      +.+|+|+
T Consensus        82 ~~v~~~~   88 (116)
T 2e7p_A           82 KQIGGCD   88 (116)
T ss_dssp             EEEECHH
T ss_pred             EEECChH
Confidence            9999974

>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A

Probab=98.78  E-value=2e-08  Score=62.90  Aligned_cols=58  Identities=5%  Similarity=-0.115  Sum_probs=49.3

Q ss_pred             CcEEEEEcccCchhchHHHHHHHHHHHhCCCc-eEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEE-eCCee
Q psy3969           3 KPYKISNTVRGVKGVKKRQQRVLMILDSKNID-YTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIF-NEEDY   80 (86)
Q Consensus         3 ~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~-f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIF-igd~y   80 (86)
                      ++.+|+++-|+.      |.+|+.+|++++++ |.+|||+  .|++..+    +.|  .         .+|+|| +||+.
T Consensus         2 ~vv~f~a~~C~~------C~~~~~~L~~~~~~~~~~vdid--~~~~l~~----~~g--~---------~vPtl~~~~G~~   58 (87)
T 1ttz_A            2 ALTLYQRDDCHL------CDQAVEALAQARAGAFFSVFID--DDAALES----AYG--L---------RVPVLRDPMGRE   58 (87)
T ss_dssp             CEEEEECSSCHH------HHHHHHHHHHTTCCCEEEEECT--TCHHHHH----HHT--T---------TCSEEECTTCCE
T ss_pred             EEEEEECCCCch------HHHHHHHHHHHHHhheEEEECC--CCHHHHH----HhC--C---------CcCeEEEECCEE
Confidence            688999999999      99999999999998 9999999  7887544    345  1         499999 89999


Q ss_pred             eec
Q psy3969          81 CGV   83 (86)
Q Consensus        81 iGg   83 (86)
                      +||
T Consensus        59 v~g   61 (87)
T 1ttz_A           59 LDW   61 (87)
T ss_dssp             EES
T ss_pred             EeC
Confidence            854

>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}

Probab=98.62  E-value=4.3e-08  Score=64.14  Aligned_cols=49  Identities=14%  Similarity=0.102  Sum_probs=40.7

Q ss_pred             CcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEcc-CCCCHhHHHHHHHhcC
Q psy3969           3 KPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDIT-EPGKENEKEFMQQNSK   57 (86)
Q Consensus         3 ~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~-~~~d~~~r~~M~~~~g   57 (86)
                      +++||.++-|+.      |.+|+.+|+++||+|+++||. ++.+.+++.+|.+++|
T Consensus         6 ~i~iY~~~~C~~------C~ka~~~L~~~gi~y~~~di~~~~~~~~~l~~~~~~~g   55 (120)
T 2kok_A            6 SVTIYGIKNCDT------MKKARIWLEDHGIDYTFHDYKKEGLDAETLDRFLKTVP   55 (120)
T ss_dssp             CEEEEECSSCHH------HHHHHHHHHHHTCCEEEEEHHHHCCCHHHHHHHHHHSC
T ss_pred             EEEEEECCCChH------HHHHHHHHHHcCCcEEEEeeeCCCCCHHHHHHHHHHcC
Confidence            578999999999      999999999999999999996 2233377777777776

>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12

Probab=98.57  E-value=6.1e-08  Score=62.90  Aligned_cols=48  Identities=8%  Similarity=-0.028  Sum_probs=39.7

Q ss_pred             cEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEcc-CCCCHhHHHHHHHhcC
Q psy3969           4 PYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDIT-EPGKENEKEFMQQNSK   57 (86)
Q Consensus         4 ~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~-~~~d~~~r~~M~~~~g   57 (86)
                      +.||.++-|+.      |.+|+++|+++||+|+++||. ++.+.++.++|.+++|
T Consensus         2 i~iY~~~~C~~------C~kak~~L~~~gi~~~~~di~~~~~~~~~l~~~~~~~g   50 (114)
T 1rw1_A            2 YVLYGIKACDT------MKKARTWLDEHKVAYDFHDYKAVGIDREHLRRWCAEHG   50 (114)
T ss_dssp             EEEEECSSCHH------HHHHHHHHHHTTCCEEEEEHHHHCCCHHHHHHHHHHHC
T ss_pred             EEEEECCCChH------HHHHHHHHHHCCCceEEEeecCCCCCHHHHHHHHHhCC
Confidence            67999999999      999999999999999999997 1223377777777665

>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A

Probab=98.47  E-value=2.9e-07  Score=61.02  Aligned_cols=45  Identities=9%  Similarity=0.011  Sum_probs=38.6

Q ss_pred             cEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhc
Q psy3969           4 PYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNS   56 (86)
Q Consensus         4 ~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~   56 (86)
                      +++|.++-|+.      |.+|+.+|+++||+|+++||.  .++..++++.+..
T Consensus         3 i~lY~~~~C~~------C~ka~~~L~~~gi~y~~~di~--~~~~~~~el~~~l   47 (132)
T 1z3e_A            3 VTLYTSPSCTS------CRKARAWLEEHEIPFVERNIF--SEPLSIDEIKQIL   47 (132)
T ss_dssp             EEEEECTTCHH------HHHHHHHHHHTTCCEEEEETT--TSCCCHHHHHHHH
T ss_pred             EEEEeCCCChH------HHHHHHHHHHcCCceEEEEcc--CCCccHHHHHHHH
Confidence            67999999999      999999999999999999998  6666666666543

>3rdw_A Putative arsenate reductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 2.20A {Yersinia pestis}

Probab=98.43  E-value=1.1e-07  Score=62.92  Aligned_cols=48  Identities=13%  Similarity=0.090  Sum_probs=39.7

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhc
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNS   56 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~   56 (86)
                      |.++.||....|+.      |.+|+.+|+++||+|+++||.  .+|..+++|.+-.
T Consensus         4 M~~i~iY~~p~C~~------c~ka~~~L~~~gi~~~~~di~--~~~~~~~eL~~~l   51 (121)
T 3rdw_A            4 MKDVTIYHNPRCSK------SRETLALVEQQGITPQVVLYL--ETPPSVDKLKELL   51 (121)
T ss_dssp             --CCEEECCTTCHH------HHHHHHHHHTTTCCCEEECTT--TSCCCHHHHHHHH
T ss_pred             CCcEEEEECCCCHH------HHHHHHHHHHcCCCcEEEeec--cCCCcHHHHHHHH
Confidence            78899999999999      999999999999999999997  5666666655544

>1s3c_A Arsenate reductase; ARSC, arsenite, oxidoreductase; 1.25A {Escherichia coli} PDB: 1sd9_A 1i9d_A 1j9b_A 1sd8_A 1jzw_A* 1sk1_A* 1sjz_A* 1sk0_A* 1sk2_A 1s3d_A

Probab=98.41  E-value=1.1e-07  Score=64.63  Aligned_cols=48  Identities=13%  Similarity=0.137  Sum_probs=39.8

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhc
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNS   56 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~   56 (86)
                      |..++||.++-|+.      |.+|+.+|+++||+|+++||.  .++..+++|.+..
T Consensus         1 M~~itiY~~p~C~~------crkak~~L~~~gi~~~~idi~--~~~~~~~eL~~~~   48 (141)
T 1s3c_A            1 MSNITIYHNPASGT------SRNTLEMIRNSGTEPTIILYL--ENPPSRDELVKLI   48 (141)
T ss_dssp             --CCEEECCTTCHH------HHHHHHHHHHTTCCCEEECTT--TSCCCHHHHHHHH
T ss_pred             CCcEEEEECCCChH------HHHHHHHHHHcCCCEEEEECC--CCCccHHHHHHHh
Confidence            88899999999999      999999999999999999998  5666666655544

>3gkx_A Putative ARSC family related protein; ARSC family protein, structural genomi 2, protein structure initiative; 2.20A {Bacteroides fragilis} SCOP: c.47.1.0

Probab=98.23  E-value=1.1e-06  Score=57.92  Aligned_cols=46  Identities=20%  Similarity=0.092  Sum_probs=38.4

Q ss_pred             CcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhc
Q psy3969           3 KPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNS   56 (86)
Q Consensus         3 ~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~   56 (86)
                      .+.||....|+.      |.+|+.+|+++||+|+++||.  .+|..++++.+-.
T Consensus         5 ~i~iY~~p~C~~------c~ka~~~L~~~gi~~~~~di~--~~~~~~~eL~~~l   50 (120)
T 3gkx_A            5 KTLFLQYPACST------CQKAKKWLIENNIEYTNRLIV--DDNPTVEELKAWI   50 (120)
T ss_dssp             CCEEEECTTCHH------HHHHHHHHHHTTCCCEEEETT--TTCCCHHHHHHHH
T ss_pred             EEEEEECCCChH------HHHHHHHHHHcCCceEEEecc--cCcCCHHHHHHHH
Confidence            478999999999      999999999999999999997  5665566555443

>3l78_A Regulatory protein SPX; transcription, transcriptional factor, disulfide bond, redox-active center, transcription regulati; 1.90A {Streptococcus mutans} SCOP: c.47.1.12

Probab=98.12  E-value=2.2e-06  Score=56.24  Aligned_cols=45  Identities=4%  Similarity=-0.023  Sum_probs=37.7

Q ss_pred             cEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhc
Q psy3969           4 PYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNS   56 (86)
Q Consensus         4 ~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~   56 (86)
                      +.||..+-|+.      |.+|+.+|+++||+|+++||.  .++..++++.+..
T Consensus         2 i~iY~~~~C~~------c~ka~~~L~~~gi~~~~~di~--~~~~~~~el~~~l   46 (120)
T 3l78_A            2 VTLFLSPSCTS------CRKARAWLNRHDVVFQEHNIM--TSPLSRDELLKIL   46 (120)
T ss_dssp             EEEEECSSCHH------HHHHHHHHHHTTCCEEEEETT--TSCCCHHHHHHHH
T ss_pred             EEEEeCCCCHH------HHHHHHHHHHcCCCeEEEecc--cCCCcHHHHHHHH
Confidence            57899999999      999999999999999999997  5665566555544

>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0

Probab=98.03  E-value=3.1e-06  Score=55.74  Aligned_cols=45  Identities=18%  Similarity=0.114  Sum_probs=37.4

Q ss_pred             cEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhc
Q psy3969           4 PYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNS   56 (86)
Q Consensus         4 ~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~   56 (86)
                      +.||...-|+.      |.+|+.+|+++||+|+++||.  .++..++++.+..
T Consensus         5 i~iY~~~~C~~------c~ka~~~L~~~gi~~~~~di~--~~~~~~~eL~~~l   49 (120)
T 3fz4_A            5 LTFYEYPKCST------CRRAKAELDDLAWDYDAIDIK--KNPPAASLIRNWL   49 (120)
T ss_dssp             EEEEECSSCHH------HHHHHHHHHHHTCCEEEEETT--TSCCCHHHHHHHH
T ss_pred             EEEEeCCCChH------HHHHHHHHHHcCCceEEEEec--cCchhHHHHHHHH
Confidence            67899999999      999999999999999999997  5655555555443

>3f0i_A Arsenate reductase; structural genomics, IDP01300, vibrio CH center for structural genomics of infectious diseases, CSGI oxidoreductase; HET: MSE; 1.88A {Vibrio cholerae}

Probab=98.03  E-value=1.3e-06  Score=57.55  Aligned_cols=49  Identities=16%  Similarity=0.109  Sum_probs=38.8

Q ss_pred             CcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEcc-CCCCHhHHHHHHHhcC
Q psy3969           3 KPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDIT-EPGKENEKEFMQQNSK   57 (86)
Q Consensus         3 ~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~-~~~d~~~r~~M~~~~g   57 (86)
                      .+.+|....|+.      |.+|+.+|+++||+|+++||. +|-+.+....+.+.+|
T Consensus         5 ~i~iY~~p~C~~------c~ka~~~L~~~gi~~~~~di~~~~~t~~eL~~~l~~~g   54 (119)
T 3f0i_A            5 SVVIYHNPKCSK------SRETLALLENQGIAPQVIKYLETSPSVEELKRLYQQLG   54 (119)
T ss_dssp             CCEEECCTTCHH------HHHHHHHHHHTTCCCEEECHHHHCCCHHHHHHHHHHHT
T ss_pred             EEEEEECCCChH------HHHHHHHHHHcCCceEEEEeccCcCcHHHHHHHHHHcC
Confidence            588999999999      999999999999999999995 2234444445555565

>4hi7_A GI20122; GST, glutathione S-transferase, enzyme function initiative, structural genomics, unknown function; HET: GSH; 1.25A {Drosophila mojavensis}

Probab=98.02  E-value=1.6e-05  Score=54.45  Aligned_cols=66  Identities=15%  Similarity=0.122  Sum_probs=48.5

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCee
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDY   80 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~y   80 (86)
                      |.||++|....|++      |++++.+|..+||+|+.+.|+-...+....+..+...          ..+||-+-.||..
T Consensus         1 M~kpiLY~~~~Sp~------~~~vr~~L~~~gi~ye~~~v~~~~~~~~~~~~~~~nP----------~g~vP~L~d~~~~   64 (228)
T 4hi7_A            1 MVKPILYGIDASPP------VRAVKLTLAALQLPYDYKIVNLMNKEQHSEEYLKKNP----------QHTVPLLEDGDAN   64 (228)
T ss_dssp             --CCEEEECTTCHH------HHHHHHHHHHHTCCCEEEECCTTTTGGGSHHHHHHCT----------TCCSCEEEETTEE
T ss_pred             CCceEEEECCCChH------HHHHHHHHHHhCCCCEEEEecCCCcccCCHHHHHhCC----------CCceeeEEECCEE
Confidence            99999999999999      9999999999999999887752133333345555442          2379999888876


Q ss_pred             ee
Q psy3969          81 CG   82 (86)
Q Consensus        81 iG   82 (86)
                      +.
T Consensus        65 l~   66 (228)
T 4hi7_A           65 IA   66 (228)
T ss_dssp             EE
T ss_pred             Ee
Confidence            54

>3qav_A RHO-class glutathione S-transferase; cytosol; 2.10A {Laternula elliptica} PDB: 3qaw_A*

Probab=97.57  E-value=0.0003  Score=48.76  Aligned_cols=67  Identities=21%  Similarity=0.218  Sum_probs=49.8

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCee
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDY   80 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~y   80 (86)
                      |.++.+|++..|++      |.+++.+|+.+||+|+.+.|+-...+....+..+...          ...||-+..||..
T Consensus        24 ~~~~~Ly~~~~sp~------~~rv~~~L~~~gi~ye~~~v~~~~~~~~~~~~~~~nP----------~g~vPvL~~~g~~   87 (243)
T 3qav_A           24 TSKPFVYWGSGSPP------CWKVLLVLQEKKIDYDEKIISFSKKEHKSEEILELNP----------RGQVPTFTDGDVV   87 (243)
T ss_dssp             -CCCEEEECTTCHH------HHHHHHHHHHTTCCCEEEECCTTTTGGGSHHHHHHCT----------TCCSCEEEETTEE
T ss_pred             cCccEEEeCCCCcc------hHHHHHHHHHcCCCceEEEecCcccccCCHHHHhhCC----------CCCCCEEEECCEE
Confidence            46789999999988      9999999999999999998862122333445555543          2379999988876


Q ss_pred             eec
Q psy3969          81 CGV   83 (86)
Q Consensus        81 iGg   83 (86)
                      +..
T Consensus        88 l~e   90 (243)
T 3qav_A           88 VNE   90 (243)
T ss_dssp             ECS
T ss_pred             Eec
Confidence            643

>1zl9_A GST class-sigma, glutathione S-transferase 5; glutathione transferase, C.elegans; HET: GSH; 2.01A {Caenorhabditis elegans}

Probab=97.55  E-value=0.00034  Score=46.84  Aligned_cols=65  Identities=11%  Similarity=-0.019  Sum_probs=50.2

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCee
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDY   80 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~y   80 (86)
                      |.++.+|+...|++      |.+++.+|+.+||+|+.+.|+  .+  ...+..+..|        ++...||-+-.||..
T Consensus         1 M~~~~Ly~~~~s~~------~~~v~~~L~~~gi~~e~~~v~--~~--~~~~~~~~~~--------~P~g~vP~L~~~g~~   62 (207)
T 1zl9_A            1 MVSYKLTYFNGRGA------GEVSRQIFAYAGQQYEDNRVT--QE--QWPALKETCA--------APFGQLPFLEVDGKK   62 (207)
T ss_dssp             CCCEEEEEESSSGG------GHHHHHHHHHHTCCCEEEEEC--TT--THHHHHHTTC--------STTSCSCEEEETTEE
T ss_pred             CCceEEEEcCCCch------HHHHHHHHHHcCCCceEEEec--HH--HHHHHhhccC--------CCCCCCCEEEECCEE
Confidence            88899999999998      999999999999999999997  32  2455555521        134489999888876


Q ss_pred             eec
Q psy3969          81 CGV   83 (86)
Q Consensus        81 iGg   83 (86)
                      +.+
T Consensus        63 l~e   65 (207)
T 1zl9_A           63 LAQ   65 (207)
T ss_dssp             EEC
T ss_pred             Eee
Confidence            643

>4f03_A Glutathione transferase; GST fold; 1.80A {Phanerochaete chrysosporium} PDB: 4g19_A*

Probab=97.51  E-value=0.00026  Score=48.29  Aligned_cols=72  Identities=13%  Similarity=0.178  Sum_probs=45.9

Q ss_pred             CCCcEEEEE----------cccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCC--CCCCCCC
Q psy3969           1 MKKPYKISN----------TVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPS--DSTVKSN   68 (86)
Q Consensus         1 ~~~~~~y~s----------s~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~--~~~~~~~   68 (86)
                      |++|.++|-          ..|.|      |.|++.+|..|||+|+.+.|+   -++....+..... ...  -..+++.
T Consensus         1 Ms~pi~lYd~~~~~~~~~~~~SP~------~~kvr~~L~~kgi~y~~~~v~---~~~~~~~~~~~g~-~~~~~~~~~~P~   70 (253)
T 4f03_A            1 MAQPIVFYDIPSNERIKHSPWSPN------TWKIRYALNYKGLKYKTEWVE---YPDIAGVVQKLGG-KPTEKTPDGRDH   70 (253)
T ss_dssp             -CCCEEEEECCCCGGGTTCCCCHH------HHHHHHHHHHHTCCEEEEECC---GGGHHHHHHHHTC-CCSEECTTCCEE
T ss_pred             CCCCeEEeecCCCCCCCCCCcChh------HHHHHHHHHHcCCCCEEEEEc---cccchhhhhhcCC-CCchhhHhhCCC
Confidence            899988872          34566      999999999999999999886   2333333333321 111  1123566


Q ss_pred             CCCCeEEeC--Ceeee
Q psy3969          69 PLPPQIFNE--EDYCG   82 (86)
Q Consensus        69 ~tvPQIFig--d~yiG   82 (86)
                      .+||-|-.+  |..+.
T Consensus        71 ~~VPvL~~~d~g~~l~   86 (253)
T 4f03_A           71 YTLPVIYDPNTKKVVE   86 (253)
T ss_dssp             CCSCEEEETTTTEEEE
T ss_pred             CccCeEEeCCCCEEEe
Confidence            799998763  34443

>2on7_A Nagst-1, Na glutathione S-transferase 1; hookworm; 2.40A {Necator americanus}

Probab=97.49  E-value=0.00047  Score=45.90  Aligned_cols=63  Identities=8%  Similarity=0.034  Sum_probs=49.4

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCee
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDY   80 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~y   80 (86)
                      |.++.+|+...|++      |.+++.+|+.+||+|+.+.|+  .  +...+..+..          +...||-+-.||..
T Consensus         1 M~~~~Ly~~~~s~~------~~~vr~~L~~~gi~~e~~~v~--~--~~~~~~~~~~----------P~g~vP~L~~~g~~   60 (206)
T 2on7_A            1 MVHYKLTYFAIRGA------GECARQIFALADQEFEDVRLD--K--EQFAKVKPDL----------PFGQVPVLEVDGKQ   60 (206)
T ss_dssp             CCCEEEEEESSSTT------THHHHHHHHHHTCCCEEEEEC--H--HHHHHHGGGS----------SSSCSCEEEETTEE
T ss_pred             CCceEEEEcCCCcc------hHHHHHHHHHcCCCeeEEEec--H--HHHHHhCcCC----------CCCCCCEEEECCEE
Confidence            88899999999998      999999999999999999997  2  3334444433          23479999888876


Q ss_pred             eec
Q psy3969          81 CGV   83 (86)
Q Consensus        81 iGg   83 (86)
                      +.+
T Consensus        61 l~e   63 (206)
T 2on7_A           61 LAQ   63 (206)
T ss_dssp             EEC
T ss_pred             Eee
Confidence            654

>1tw9_A Glutathione S-transferase 2; 1.71A {Heligmosomoides polygyrus} SCOP: a.45.1.1 c.47.1.5

Probab=97.46  E-value=0.00039  Score=46.32  Aligned_cols=63  Identities=10%  Similarity=-0.001  Sum_probs=48.6

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCee
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDY   80 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~y   80 (86)
                      |.++.+|+...|++      |.+++.+|+.+||+|+.+.|+    .+...+..+..          +...||-+-.||..
T Consensus         1 M~~~~Ly~~~~s~~------~~~v~~~L~~~gi~ye~~~v~----~~~~~~~~~~~----------P~g~vP~L~~~g~~   60 (206)
T 1tw9_A            1 MVHYKLTYFNGRGA------GECARQVFALADQKYEDVRLT----QETFVPLKATF----------PFGQVPVLEVDGQQ   60 (206)
T ss_dssp             CCCEEEEEESSSGG------GHHHHHHHHHTTCCCEEEEEC----HHHHGGGGGGS----------TTSCSCEEEETTEE
T ss_pred             CCceEEEEcCCCcc------HHHHHHHHHHcCCCceEEEeC----HHHHHHHcccC----------CCCCCCEEEECCEE
Confidence            88899999999988      999999999999999999997    22233333332          34489999888876


Q ss_pred             eec
Q psy3969          81 CGV   83 (86)
Q Consensus        81 iGg   83 (86)
                      +.+
T Consensus        61 l~e   63 (206)
T 1tw9_A           61 LAQ   63 (206)
T ss_dssp             EEC
T ss_pred             Eec
Confidence            654

>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1

Probab=97.46  E-value=9.9e-05  Score=42.57  Aligned_cols=62  Identities=16%  Similarity=0.105  Sum_probs=44.4

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHh--C----CCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeE
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDS--K----NIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQI   74 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~--k----~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQI   74 (86)
                      |.++.+|+++-|+.      |.++...|+.  +    ++.|..+|++  .+++.    .++.|          -..+|.+
T Consensus         2 m~~vv~f~~~~C~~------C~~~~~~l~~~~~~~~~~~~~~~vd~~--~~~~~----~~~~~----------v~~~Pt~   59 (85)
T 1nho_A            2 VVNIEVFTSPTCPY------CPMAIEVVDEAKKEFGDKIDVEKIDIM--VDREK----AIEYG----------LMAVPAI   59 (85)
T ss_dssp             CCCEEEESCSSSCC------STTHHHHHHHHHHHHCSSCCEEEECTT--TCGGG----GGGTC----------SSCSSEE
T ss_pred             eEEEEEEECCCCcc------hHHHHHHHHHHHHHhcCCeEEEEEECC--CCHHH----HHhCC----------ceeeCEE
Confidence            67888999999998      6666655554  1    7999999998  56542    23334          2268999


Q ss_pred             EeCCe--eeecc
Q psy3969          75 FNEED--YCGVF   84 (86)
Q Consensus        75 Figd~--yiGgy   84 (86)
                      |++|+  +.|..
T Consensus        60 ~~~G~~~~~G~~   71 (85)
T 1nho_A           60 AINGVVRFVGAP   71 (85)
T ss_dssp             EETTTEEEECSS
T ss_pred             EECCEEEEccCC
Confidence            99888  67753

>3ir4_A Glutaredoxin 2; glutathione, IDP00895, structural genomics, for structural genomics of infectious diseases, csgid, oxidoreductase; HET: MSE GSH; 1.20A {Salmonella enterica subsp} PDB: 1g7o_A

Probab=97.46  E-value=0.00024  Score=48.14  Aligned_cols=62  Identities=11%  Similarity=0.052  Sum_probs=47.0

Q ss_pred             CCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEE-eCCee
Q psy3969           2 KKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIF-NEEDY   80 (86)
Q Consensus         2 ~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIF-igd~y   80 (86)
                      .++.+|+...|++      |.+++.+|+.+||+|+.++|+-  .+.. .. .+..+          ..+||.+. .||..
T Consensus         2 ~~~~Ly~~~~sp~------~~~v~~~l~~~gi~~~~~~v~~--~~~~-~~-~~~~p----------~~~vP~l~~~~g~~   61 (218)
T 3ir4_A            2 NAMKLYIYDHCPF------CVKARMIFGLKNIPVELNVLQN--DDEA-TP-TRMIG----------QKMVPILQKDDSRY   61 (218)
T ss_dssp             CCCEEEECTTCHH------HHHHHHHHHHHTCCCEEEECCT--TCCH-HH-HHHHS----------SSCSCEEECTTSCE
T ss_pred             CeEEEEcCCCCch------HHHHHHHHHHcCCceEEEECCC--cchh-hh-hhcCC----------CceeeeEEEeCCeE
Confidence            4678999999998      9999999999999999999973  2221 12 33333          34899999 78877


Q ss_pred             eec
Q psy3969          81 CGV   83 (86)
Q Consensus        81 iGg   83 (86)
                      +.+
T Consensus        62 l~e   64 (218)
T 3ir4_A           62 LPE   64 (218)
T ss_dssp             EEC
T ss_pred             eeC
Confidence            765

>1yq1_A Glutathione S-transferase; nematoda, structural genomics, PSI, protein structure initiative; 3.00A {Caenorhabditis elegans}

Probab=97.44  E-value=0.00032  Score=46.77  Aligned_cols=64  Identities=6%  Similarity=0.036  Sum_probs=48.0

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCee
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDY   80 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~y   80 (86)
                      |.++.+|+...|++      |.+++.+|+.+||+|+.+.|+  . .+...+..+..          +...||-+-.||..
T Consensus         1 M~~~~Ly~~~~s~~------~~~vr~~L~~~gi~~e~~~v~--~-~~~~~~~~~~~----------P~g~vP~L~~~g~~   61 (208)
T 1yq1_A            1 MPSYKLTYFFFRGL------GEPIRLLFHLAGVQFEEVRMN--P-DQTWLDIKDST----------PMKQLPVLNIDGFE   61 (208)
T ss_dssp             CCCEEEEEESSSTT------THHHHHHHHHHTCCCEEEEEC--T-TTCCHHHHHTS----------TTSCSCEEEESSCE
T ss_pred             CCceEEEEeCCCCc------hHHHHHHHHHcCCCeEEEEec--c-cchhhhhhccC----------CCCCCCEEEECCEE
Confidence            88999999999999      999999999999999999886  2 11123334433          23379999887766


Q ss_pred             eec
Q psy3969          81 CGV   83 (86)
Q Consensus        81 iGg   83 (86)
                      +.+
T Consensus        62 l~e   64 (208)
T 1yq1_A           62 LPQ   64 (208)
T ss_dssp             ECC
T ss_pred             Eee
Confidence            543

>1okt_A Glutathione S-transferase; GST; 1.9A {Plasmodium falciparum} SCOP: a.45.1.1 c.47.1.5 PDB: 1pa3_A 1q4j_A* 3fr9_A* 3frc_A* 2aaw_A* 3fr6_A 3fr3_A*

Probab=97.40  E-value=0.00062  Score=45.81  Aligned_cols=66  Identities=11%  Similarity=-0.023  Sum_probs=49.2

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHh----cCCCCCCCCCCCCCCCCeEEe
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQN----SKATPSDSTVKSNPLPPQIFN   76 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~----~g~~~~~~~~~~~~tvPQIFi   76 (86)
                      |.++.+|+...|++      |.+++.+|..+||+|+.+.|+  -..+...+..+.    ..         +..+||-+-.
T Consensus         2 m~~~~Ly~~~~s~~------~~~v~~~L~~~gi~~e~~~v~--~~~~~~~~~~~~~~~~~~---------P~g~vP~L~~   64 (211)
T 1okt_A            2 GDNIVLYYFDARGK------AELIRLIFAYLGIEYTDKRFG--VNGDAFVEFKNFKKEKDT---------PFEQVPILQI   64 (211)
T ss_dssp             CCCEEEEEESSSTT------THHHHHHHHHHTCCCEEEEET--SSSCHHHHHHHHHHHSCC---------SSSCSCEEEE
T ss_pred             CCccEEEEECCCch------hHHHHHHHHHcCCCceeeecc--CCHHHHHHHhhccccccC---------CCCCCCEEEE
Confidence            67889999999999      999999999999999999995  111234444441    21         3448999988


Q ss_pred             CCeeeec
Q psy3969          77 EEDYCGV   83 (86)
Q Consensus        77 gd~yiGg   83 (86)
                      ||..+..
T Consensus        65 ~g~~l~e   71 (211)
T 1okt_A           65 GDLILAQ   71 (211)
T ss_dssp             TTEEEEC
T ss_pred             CCEEeeh
Confidence            8876643

>3ay8_A Glutathione S-transferase; GST fold, GST binding, cytosolic; 2.10A {Bombyx mori}

Probab=97.38  E-value=0.00047  Score=46.59  Aligned_cols=67  Identities=13%  Similarity=0.007  Sum_probs=48.8

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCee
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDY   80 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~y   80 (86)
                      |.++.+|+...|++      |.+++.+|+.+||+|+.+.|+-...+....+..+...          ..+||-+..||..
T Consensus         1 M~~~~Ly~~~~s~~------~~~v~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~~nP----------~g~vP~L~~~g~~   64 (216)
T 3ay8_A            1 MSSLKLYHFPVSGP------SRGALLAARAIGIPIQIEIVNLFKKEQLQESFLKLNP----------QHCVPTLDDNNFV   64 (216)
T ss_dssp             -CCCEEEECTTCHH------HHHHHHHHHHHTCCCEEEECCTTCGGGCCHHHHHHSS----------SCCSSEEEETTEE
T ss_pred             CCceEEecCCCCcc------HHHHHHHHHHcCCCceEEEeccccccccCHHHHhhCC----------CCCCCeEEECCEE
Confidence            78899999999988      9999999999999999998862111222244555443          2379999888876


Q ss_pred             eec
Q psy3969          81 CGV   83 (86)
Q Consensus        81 iGg   83 (86)
                      +.+
T Consensus        65 l~e   67 (216)
T 3ay8_A           65 LWE   67 (216)
T ss_dssp             EEC
T ss_pred             EEc
Confidence            654

>2on5_A Nagst-2, Na glutathione S-transferase 2; hookworm; HET: GSH; 1.90A {Necator americanus}

Probab=97.33  E-value=0.00034  Score=46.59  Aligned_cols=63  Identities=13%  Similarity=0.011  Sum_probs=48.3

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCee
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDY   80 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~y   80 (86)
                      |.++.+|+...|++      |.+++.+|+.+||+|+.+.|+  .+  ...+..+..          +...||-+-.||..
T Consensus         1 m~~~~Ly~~~~s~~------~~~vr~~L~~~gi~ye~~~v~--~~--~~~~~~~~~----------P~g~vP~L~~~g~~   60 (206)
T 2on5_A            1 MVHYKLTYFAGRGL------AEPIRQIFALAGQKYEDVRYT--FQ--EWPKHKDEM----------PFGQIPVLEEDGKQ   60 (206)
T ss_dssp             CCCEEEEEESSSGG------GHHHHHHHHHHTCCCEEEEEC--TT--TGGGGGGGS----------TTSCSCEEEETTEE
T ss_pred             CCceEEEecCCCcc------hHHHHHHHHHcCCCceEEEec--HH--HHHHhccCC----------CCCCCCEEEECCEE
Confidence            88899999999998      999999999999999999997  22  122333333          33489999888876


Q ss_pred             eec
Q psy3969          81 CGV   83 (86)
Q Consensus        81 iGg   83 (86)
                      +.+
T Consensus        61 l~e   63 (206)
T 2on5_A           61 LAQ   63 (206)
T ss_dssp             EES
T ss_pred             Eec
Confidence            654

>2imi_A Epsilon-class glutathione S-transferase; HET: GSH; 1.40A {Anopheles gambiae} PDB: 2il3_A* 2imk_A*

Probab=97.32  E-value=0.00042  Score=47.01  Aligned_cols=67  Identities=7%  Similarity=-0.038  Sum_probs=48.1

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCee
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDY   80 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~y   80 (86)
                      |.++.+|+...|++      |.+++.+|+.+||+|+.+.|+-...+....+..+..          +..+||-+-.||..
T Consensus         1 M~~~~Ly~~~~s~~------~~~v~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~~n----------P~g~vP~L~~~g~~   64 (221)
T 2imi_A            1 MSNLVLYTLHLSPP------CRAVELTAKALGLELEQKTINLLTGDHLKPEFVKLN----------PQHTIPVLDDNGTI   64 (221)
T ss_dssp             -CCEEEEECTTCHH------HHHHHHHHHHHTCCEEEEECCGGGTGGGSHHHHTTC----------TTCCSCEEEETTEE
T ss_pred             CCceEEeeCCCCcc------HHHHHHHHHHcCCCceEEEccccccccCCHHHHhhC----------cCCCCCEEEECCEE
Confidence            78899999999988      999999999999999999886211112233444433          33489999877776


Q ss_pred             eec
Q psy3969          81 CGV   83 (86)
Q Consensus        81 iGg   83 (86)
                      +.+
T Consensus        65 l~e   67 (221)
T 2imi_A           65 ITE   67 (221)
T ss_dssp             EES
T ss_pred             Eee
Confidence            654

>3ik7_A Glutathione S-transferase A4; human GST A4-4, enzyme, cytoplasm, polymorphism; HET: BOB; 1.97A {Homo sapiens} PDB: 1gum_A 1gul_A*

Probab=97.32  E-value=0.0012  Score=44.52  Aligned_cols=66  Identities=15%  Similarity=0.068  Sum_probs=47.4

Q ss_pred             CC-CcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCe
Q psy3969           1 MK-KPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEED   79 (86)
Q Consensus         1 ~~-~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~   79 (86)
                      |+ ++.+|+...|++      |.+++.+|..+||+|+.+.|+  ..+ ....+.-+ |  .     .+..+||-+-.||.
T Consensus         1 Ms~~~~Ly~~~~s~~------~~~v~~~L~~~gi~ye~~~v~--~~~-~~~~~~p~-~--~-----~p~g~vP~L~~~g~   63 (222)
T 3ik7_A            1 MAARPKLHYPNGRGR------MESVRWVLAAAGVEFDEEFLE--TKE-QLYKLQDG-N--H-----LLFQQVPMVEIDGM   63 (222)
T ss_dssp             -CCSCEEEECSSCTT------THHHHHHHHHTTCCCEEEECC--SHH-HHHHHHHT-T--C-----STTSCSCEEEETTE
T ss_pred             CCCCcEEEEeCCCcc------hHHHHHHHHHcCCCeeEEeeC--cHH-HHHHhhhc-C--C-----CCCCCCCEEEECCE
Confidence            66 899999999999      999999999999999999997  322 22222221 1  0     12347999988887


Q ss_pred             eeec
Q psy3969          80 YCGV   83 (86)
Q Consensus        80 yiGg   83 (86)
                      .+.+
T Consensus        64 ~l~e   67 (222)
T 3ik7_A           64 KLVQ   67 (222)
T ss_dssp             EEES
T ss_pred             Eeeh
Confidence            6643

>1k3y_A GSTA1-1, glutathione S-transferase A1; S-hexyl glutatione, water structu transferase; HET: GTX; 1.30A {Homo sapiens} SCOP: a.45.1.1 c.47.1.5 PDB: 1gsf_A* 1guh_A* 1gsd_A* 1k3o_A 1k3l_A* 1pl1_A* 1pkz_A 1pkw_A* 2r6k_A* 1gse_A* 3u6v_A 1usb_A* 1ydk_A* 3q74_A 3ktl_A* 1pl2_A* 2r3x_A* 1xwg_A 3l0h_A* 1ags_A* ...

Probab=97.32  E-value=0.0013  Score=44.58  Aligned_cols=66  Identities=11%  Similarity=0.059  Sum_probs=49.8

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCee
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDY   80 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~y   80 (86)
                      |.++.+|+...|++      |.+++.+|..+||+|+.+.++  . .+...++.+...        ++...||-+-.||..
T Consensus         1 M~~~~Ly~~~~s~~------~~~vr~~L~~~gi~ye~~~v~--~-~~~~~~~~~~~~--------nP~g~vPvL~~~g~~   63 (221)
T 1k3y_A            1 AEKPKLHYFNARGR------MESTRWLLAAAGVEFEEKFIK--S-AEDLDKLRNDGY--------LMFQQVPMVEIDGMK   63 (221)
T ss_dssp             CCCCEEEEESSSTT------THHHHHHHHHHTCCCEEEEEC--S-HHHHHHHHHTTC--------CTTSCSCEEEETTEE
T ss_pred             CCCcEEEEeCCCch------hHHHHHHHHHcCCCceEEEeC--c-hhHHHHHhhhcC--------CCCCCCCEEEECCEE
Confidence            88999999999999      999999999999999999986  2 233444444410        133479998888766


Q ss_pred             eec
Q psy3969          81 CGV   83 (86)
Q Consensus        81 iGg   83 (86)
                      +..
T Consensus        64 l~e   66 (221)
T 1k3y_A           64 LVQ   66 (221)
T ss_dssp             EES
T ss_pred             Eec
Confidence            543

>3m3m_A Glutathione S-transferase; PSI-II, structural genomics, protein structure initiative, N SGX research center for structural genomics; HET: GSH; 1.75A {Pseudomonas fluorescens}

Probab=97.31  E-value=0.0005  Score=46.02  Aligned_cols=66  Identities=12%  Similarity=0.089  Sum_probs=47.8

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEe-CCe
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFN-EED   79 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFi-gd~   79 (86)
                      |..+.+|+...|++      |.+++.+|..+||+|+.+.|+-...+....+..+..          +..+||-+.. ||.
T Consensus         1 M~~~~Ly~~~~s~~------~~~v~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~~~----------P~g~vP~L~~d~g~   64 (210)
T 3m3m_A            1 MSLYKVYGDYRSGN------CYKIKLMLNLLGLPYEWQAVDILGGDTQTEAFLAKN----------PNGKIPVLELEDGT   64 (210)
T ss_dssp             -CCEEEEECTTSHH------HHHHHHHHHHTTCCEEEEECCTTTTTTSSHHHHTTC----------TTCCSCEEEETTSC
T ss_pred             CCeEEEeCCCCCCc------HHHHHHHHHHcCCCCEEEEecCCCccccCHHHHhhC----------CCCCCCEEEecCCE
Confidence            78889999999998      999999999999999999986212223334444443          2348999985 665


Q ss_pred             eee
Q psy3969          80 YCG   82 (86)
Q Consensus        80 yiG   82 (86)
                      .+.
T Consensus        65 ~l~   67 (210)
T 3m3m_A           65 CLW   67 (210)
T ss_dssp             EEE
T ss_pred             EEe
Confidence            543

>2ws2_A NU-class GST, glutathione S-transferase; parasite, nematode; 2.01A {Haemonchus contortus}

Probab=97.30  E-value=0.00047  Score=45.95  Aligned_cols=63  Identities=13%  Similarity=0.003  Sum_probs=48.2

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCee
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDY   80 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~y   80 (86)
                      |.++.+|+...|++      |.+++.+|+.+||+|+.+.|+  .+  ...+..+..          +...||-+-.||..
T Consensus         1 m~~~~Ly~~~~s~~------~~~v~~~L~~~gi~~e~~~v~--~~--~~~~~~~~~----------P~g~vP~L~~~g~~   60 (204)
T 2ws2_A            1 MVHYKLTYFNGRGA------AEIIRQVFVLAGQDYEDVRLT--HE--EWPKHKASM----------PFGQLPVLEVDGKQ   60 (204)
T ss_dssp             CCCEEEEEESSSGG------GHHHHHHHHHTTCCCEEEEEC--TT--TGGGTGGGS----------TTSCSCEEEETTEE
T ss_pred             CCccEEEEeCCCch------HHHHHHHHHHcCCCceEEEec--Hh--hHHHhhhcC----------CCCCCCEEEECCEE
Confidence            88899999999998      999999999999999999997  22  122333333          33489999888876


Q ss_pred             eec
Q psy3969          81 CGV   83 (86)
Q Consensus        81 iGg   83 (86)
                      +.+
T Consensus        61 l~e   63 (204)
T 2ws2_A           61 LPQ   63 (204)
T ss_dssp             EES
T ss_pred             eec
Confidence            653

>2a2r_A Glutathione S-transferase P; detoxification, nitric oxide carrier, S- nitrosoglutathione; HET: MES GSN; 1.40A {Homo sapiens} SCOP: a.45.1.1 c.47.1.5 PDB: 11gs_A* 12gs_A* 14gs_A* 16gs_A* 18gs_A* 21gs_A* 13gs_A* 2a2s_A* 3dd3_A* 3dgq_A* 3n9j_A* 3pgt_A* 1pgt_A* 2pgt_A* 4pgt_A* 22gs_A* 17gs_A* 3gus_A* 10gs_A* 1aqv_A* ...

Probab=97.29  E-value=0.0007  Score=45.53  Aligned_cols=65  Identities=12%  Similarity=0.034  Sum_probs=48.3

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCee
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDY   80 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~y   80 (86)
                      |.++.+|+...|++      |.+++.+|+.+||+|+.+.|+  ..+....+..+...          ...||-+-.||..
T Consensus         1 M~~~~Ly~~~~s~~------~~~v~~~L~~~gi~~e~~~v~--~~~~~~~~~~~~~P----------~g~vP~L~~~g~~   62 (210)
T 2a2r_A            1 MPPYTVVYFPVRGR------CAALRMLLADQGQSWKEEVVT--VETWQEGSLKASCL----------YGQLPKFQDGDLT   62 (210)
T ss_dssp             CCSEEEEECSSSGG------GHHHHHHHHHTTCCEEEEECC--HHHHHHSHHHHHST----------TSCSCEEEETTEE
T ss_pred             CCceEEEEeCCcch------HHHHHHHHHHcCCCceEEEec--HHhhchhhccCCCC----------CCCCCEEEECCEE
Confidence            78899999998998      999999999999999999997  22111124444332          2379999888766


Q ss_pred             eec
Q psy3969          81 CGV   83 (86)
Q Consensus        81 iGg   83 (86)
                      +.+
T Consensus        63 l~e   65 (210)
T 2a2r_A           63 LYQ   65 (210)
T ss_dssp             EEC
T ss_pred             Eee
Confidence            543

>1vf1_A Glutathione S-transferase 3; detoxification; HET: GSH; 1.77A {Gallus gallus} PDB: 1vf2_A* 1vf3_A* 1vf4_A

Probab=97.23  E-value=0.0022  Score=43.97  Aligned_cols=66  Identities=12%  Similarity=0.064  Sum_probs=48.4

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCee
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDY   80 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~y   80 (86)
                      |.++.+|+...|++      |.+++.+|..+||+|+.+.|+  . .+...++.+...        ++...||-+-.||..
T Consensus         2 m~~~~Ly~~~~s~~------~~~vr~~L~~~gi~ye~~~v~--~-~~~~~~~~~~~~--------nP~g~vP~L~~~g~~   64 (229)
T 1vf1_A            2 AAKPVLYYFNGRGK------MESIRWLLAAAGVEFEEVFLE--T-REQYEKLLQSGI--------LMFQQVPMVEIDGMK   64 (229)
T ss_dssp             -CCCEEEECSSCTT------THHHHHHHHHTTCCCEEEECC--S-HHHHHHHHHHTC--------STTSCSCEEEETTEE
T ss_pred             CCCeEEEEeCCCch------hHHHHHHHHHcCCCCeeEecC--c-HHHHHHHHHhcC--------CCCCCCCEEEECCEE
Confidence            56889999999998      999999999999999999986  3 233444554410        133479998888766


Q ss_pred             eec
Q psy3969          81 CGV   83 (86)
Q Consensus        81 iGg   83 (86)
                      +..
T Consensus        65 l~e   67 (229)
T 1vf1_A           65 LVQ   67 (229)
T ss_dssp             EES
T ss_pred             EEc
Confidence            543

>1e6b_A Glutathione S-transferase; 1.65A {Arabidopsis thaliana} SCOP: a.45.1.1 c.47.1.5

Probab=97.22  E-value=0.0015  Score=44.12  Aligned_cols=66  Identities=15%  Similarity=0.093  Sum_probs=47.3

Q ss_pred             CCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeee
Q psy3969           2 KKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYC   81 (86)
Q Consensus         2 ~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yi   81 (86)
                      .++.+|+...|++      |.+++.+|+.+||+|+.+.|+-...+....+..+...          ..+||-+..||..+
T Consensus         7 ~~~~Ly~~~~s~~------~~~v~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~~nP----------~g~vP~L~~~g~~l   70 (221)
T 1e6b_A            7 EKLKLYSYWRSSC------AHRVRIALALKGLDYEYIPVNLLKGDQFDSDFKKINP----------MGTVPALVDGDVVI   70 (221)
T ss_dssp             -CCEEEECTTCHH------HHHHHHHHHHTTCCCEEEECCTTTTGGGCHHHHHHCT----------TCCSSEEEETTEEE
T ss_pred             CCeEEEecCCCCc------hHHHHHHHHHcCCCCEEEEecCCcccccCHHHHhhCC----------CCCCCEEEECCEEE
Confidence            4678898888887      9999999999999999999872111223344555442          33899998888766


Q ss_pred             ec
Q psy3969          82 GV   83 (86)
Q Consensus        82 Gg   83 (86)
                      .+
T Consensus        71 ~e   72 (221)
T 1e6b_A           71 ND   72 (221)
T ss_dssp             ES
T ss_pred             ee
Confidence            54

>2hnl_A Glutathione S-transferase 1; prostaglandin synthase, river BLI onchocerca volvulus, immune modulation; HET: GSH; 2.00A {Onchocerca volvulus}

Probab=97.22  E-value=0.0014  Score=44.98  Aligned_cols=63  Identities=17%  Similarity=0.196  Sum_probs=48.5

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCee
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDY   80 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~y   80 (86)
                      |.++.+|+...|++      |.+++.+|+.+||+|+.+.|+  .  +...+..+..          +...||-+-.||..
T Consensus        25 m~~~~Ly~~~~s~~------~~~vr~~L~~~gi~ye~~~v~--~--~~~~~~~~~n----------P~g~vPvL~~~g~~   84 (225)
T 2hnl_A           25 MEKYTLTYFNGRGR------AEVIRLLFALANVSYEDNRIT--R--DEWKYLKPRT----------PFGHVPMLNVSGNV   84 (225)
T ss_dssp             CCCEEEEEESSSGG------GHHHHHHHHHHTCCCEEEEEC--H--HHHHHHGGGS----------SSSCSCEEEETTEE
T ss_pred             CCCeEEEEcCCCCc------hHHHHHHHHHCCCCeeEEEeC--h--hhhHHhccCC----------CCCCCCEEEECCEE
Confidence            66788999998988      999999999999999999997  2  3344444433          23479999888876


Q ss_pred             eec
Q psy3969          81 CGV   83 (86)
Q Consensus        81 iGg   83 (86)
                      +.+
T Consensus        85 l~e   87 (225)
T 2hnl_A           85 LGE   87 (225)
T ss_dssp             EEC
T ss_pred             Eec
Confidence            653

>3bby_A Uncharacterized GST-like protein YFCF; NP_416804.1, glutathione S-transferase, N-terminal domain, S genomics; 1.85A {Escherichia coli}

Probab=97.19  E-value=0.00077  Score=45.37  Aligned_cols=67  Identities=10%  Similarity=0.007  Sum_probs=41.6

Q ss_pred             CCCcEEEEEc--ccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCC
Q psy3969           1 MKKPYKISNT--VRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEE   78 (86)
Q Consensus         1 ~~~~~~y~ss--~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd   78 (86)
                      |.++.+|+..  .|++      |.+++.+|+.+||+|+.+.|+-...+....+..+..          +...||-+-.||
T Consensus         4 ~~~~~Ly~~~~~~s~~------~~~v~~~l~~~gi~~e~~~v~~~~~~~~~~~~~~~n----------P~g~vP~L~~~g   67 (215)
T 3bby_A            4 KPAITLWSDAHFFSPY------VLSAWVALQEKGLSFHIKTIDLDSGEHLQPTWQGYG----------QTRRVPLLQIDD   67 (215)
T ss_dssp             CCCEEEEEETTSCCHH------HHHHHHHHHHHTCCCEEEEEC----------------------------CCCEEEETT
T ss_pred             CCCEEEEecCCCCCcH------HHHHHHHHHHcCCCCEEEEecCccccccCHHHHhhC----------CCCCCCEEEeCC
Confidence            4578899886  7887      999999999999999999886211112223344333          234799998888


Q ss_pred             eeeec
Q psy3969          79 DYCGV   83 (86)
Q Consensus        79 ~yiGg   83 (86)
                      ..+.+
T Consensus        68 ~~l~e   72 (215)
T 3bby_A           68 FELSE   72 (215)
T ss_dssp             EEEES
T ss_pred             eEeec
Confidence            76643

>3lyp_A Stringent starvation protein A; structural genomics, GST-superfamily, SSPA, stringent starva protein A homolog, PSI-2; 1.60A {Pseudomonas fluorescens} PDB: 3mdk_A

Probab=97.16  E-value=0.00069  Score=45.71  Aligned_cols=62  Identities=11%  Similarity=0.117  Sum_probs=45.7

Q ss_pred             CcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeeee
Q psy3969           3 KPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCG   82 (86)
Q Consensus         3 ~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yiG   82 (86)
                      ++.+|+...|++      |.+++.+|+.+||+|+.+.|+  .. ....+..+...          ..+||-+-.||..+.
T Consensus         8 ~~~Ly~~~~s~~------~~~v~~~L~~~gi~~e~~~v~--~~-~~~~~~~~~~P----------~g~vP~L~~~g~~l~   68 (215)
T 3lyp_A            8 RLACYSDPADHY------SHRVRIVLAEKGVSAEIISVE--AG-RQPPKLIEVNP----------YGSLPTLVDRDLALW   68 (215)
T ss_dssp             CCEEEECTTCHH------HHHHHHHHHHHTCCCEEEECC------CCHHHHHHCT----------TCCSSEEECC-CEEE
T ss_pred             CeEEEeCCCCch------HHHHHHHHHHCCCCcEEEecC--cc-cccHHHHHHCC----------CCCcCeEEECCEEee
Confidence            778999998988      999999999999999999997  22 22344555443          237999988776654


Q ss_pred             c
Q psy3969          83 V   83 (86)
Q Consensus        83 g   83 (86)
                      +
T Consensus        69 e   69 (215)
T 3lyp_A           69 E   69 (215)
T ss_dssp             S
T ss_pred             c
Confidence            3

>4g10_A Glutathione S-transferase homolog; thioredoxin fold; HET: MSE GSH; 1.20A {Sphingomonas paucimobilis}

Probab=97.11  E-value=0.00067  Score=48.28  Aligned_cols=64  Identities=13%  Similarity=0.163  Sum_probs=44.4

Q ss_pred             CCCc---EEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEe-
Q psy3969           1 MKKP---YKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFN-   76 (86)
Q Consensus         1 ~~~~---~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFi-   76 (86)
                      |.+|   .+|.+..|.+      |+|+.-+|..+||+|+.+.|+  -....-++...+.+         +...||-+-+ 
T Consensus         1 Ma~p~~~~LY~~~~sP~------~~rv~i~L~e~gi~ye~~~vd--~~~~~pe~~~~~~n---------P~g~VPvL~~d   63 (265)
T 4g10_A            1 MAEPQELTIYHIPGCPF------SERVEIMLELKGLRMKDVEID--ISKPRPDWLLAKTG---------GTTALPLLDVE   63 (265)
T ss_dssp             -CCCCCCEEEECTTCHH------HHHHHHHHHHHTCCCEEEECC--TTSCCCHHHHHHHT---------SCCCSCEEECT
T ss_pred             CcCCCceEEEecCCChH------HHHHHHHHHHhCCCCEEEEeC--CCCCCcHHHHHhcC---------CCCccceEEEC
Confidence            7776   7999999998      999999999999999988875  21111233334343         2347999865 


Q ss_pred             CCeee
Q psy3969          77 EEDYC   81 (86)
Q Consensus        77 gd~yi   81 (86)
                      ||..+
T Consensus        64 ~g~~l   68 (265)
T 4g10_A           64 NGESL   68 (265)
T ss_dssp             TSCEE
T ss_pred             CCeEE
Confidence            55544

>2cz2_A Maleylacetoacetate isomerase; structural genomics, GST, GSTZ1-1, NPPSFA, national project protein structural and functional analyses; HET: GSH; 1.40A {Mus musculus} PDB: 2cz3_A 1fw1_A*

Probab=97.09  E-value=0.0022  Score=43.56  Aligned_cols=64  Identities=22%  Similarity=0.110  Sum_probs=47.7

Q ss_pred             CCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCH----hHHHHHHHhcCCCCCCCCCCCCCCCCeEEeC
Q psy3969           2 KKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKE----NEKEFMQQNSKATPSDSTVKSNPLPPQIFNE   77 (86)
Q Consensus         2 ~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~----~~r~~M~~~~g~~~~~~~~~~~~tvPQIFig   77 (86)
                      .++.+|+...|++      |.+++.+|+.+||+|+.+.|+  ...    ....+..+...          ..+||-+-.|
T Consensus        11 ~~~~Ly~~~~sp~------~~~v~~~L~~~gi~~e~~~v~--~~~~~~e~~~~~~~~~nP----------~g~vP~L~~~   72 (223)
T 2cz2_A           11 GKPILYSYFRSSC------SWRVRIALALKGIDYEIVPIN--LIKDGGQQFTEEFQTLNP----------MKQVPALKID   72 (223)
T ss_dssp             CCCEEEECTTCHH------HHHHHHHHHHTTCCCEEEECC--SSGGGCGGGSHHHHHHCT----------TCCSCEEEET
T ss_pred             CceEEEecCCCCh------HHHHHHHHHhcCCCCeEEEee--cccCchhhcCHHHhccCC----------CCCCCEEEEC
Confidence            4678998888887      999999999999999999997  322    23344555442          3389999888


Q ss_pred             Ceeeec
Q psy3969          78 EDYCGV   83 (86)
Q Consensus        78 d~yiGg   83 (86)
                      |..+.+
T Consensus        73 g~~l~e   78 (223)
T 2cz2_A           73 GITIVQ   78 (223)
T ss_dssp             TEEEES
T ss_pred             CEEEee
Confidence            876643

>3iso_A Putative glutathione transferase; GST; HET: GSH; 1.90A {Clonorchis sinensis}

Probab=97.08  E-value=0.0032  Score=42.46  Aligned_cols=67  Identities=13%  Similarity=0.091  Sum_probs=47.2

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCee
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDY   80 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~y   80 (86)
                      |. +.+|+...|++      |.+++.+|+.+||+|+.+.|+. ...  -++......      .+++...||-+-.||..
T Consensus         1 M~-~~Ly~~~~s~~------~~~vr~~L~~~gi~ye~~~v~~-~~~--~~~~~~~~~------~~~P~g~vP~L~d~~~~   64 (218)
T 3iso_A            1 MA-PVLGYWKIRGL------AQPIRLLLEYVGDSYEEHSYGR-CDG--EKWQNDKHN------LGLELPNLPYYKDGNFS   64 (218)
T ss_dssp             CC-CEEEEESSSGG------GHHHHHHHHHHTCCCEEEEECT-TCH--HHHHHHTTS------SCCSSCCSSEEEETTEE
T ss_pred             CC-cEEEEeCCCcc------hHHHHHHHHHcCCCceeeccCC-CCH--HHHHhhchh------cCCCCCCCCeEEECCEE
Confidence            66 88999999999      9999999999999999999951 111  122222221      11355689999777765


Q ss_pred             eec
Q psy3969          81 CGV   83 (86)
Q Consensus        81 iGg   83 (86)
                      +.+
T Consensus        65 l~e   67 (218)
T 3iso_A           65 LTQ   67 (218)
T ss_dssp             EES
T ss_pred             Eec
Confidence            543

>3ic8_A Uncharacterized GST-like proteinprotein; glutathione, transferase, PSI, MCSG, structural genomics; 2.40A {Pseudomonas syringae PV}

Probab=97.06  E-value=0.00099  Score=47.98  Aligned_cols=65  Identities=11%  Similarity=0.060  Sum_probs=49.1

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCee
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDY   80 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~y   80 (86)
                      |..+.+|+...|++      |.+++.+|+.+||+|+.+.|+  .. ..+.++.+..+         +..+||-+..||..
T Consensus         1 M~~~~Ly~~~~sp~------~~kvr~~L~~~gi~ye~~~v~--~~-~~~~~~~~~n~---------P~g~vPvL~~~g~~   62 (310)
T 3ic8_A            1 MSELILHHYPTSLF------AEKARLMLGFKGVNWRSVTIP--SI-MPKPDLTALTG---------GYRKTPVLQIGADI   62 (310)
T ss_dssp             -CCEEEEECTTCGG------GHHHHHHHHHHTCEEEEEECC--SS-SCCHHHHHHHS---------SCCCSCEEEETTEE
T ss_pred             CCeEEEEecCCCcH------HHHHHHHHHhcCCCcEEEEcC--CC-CCcHHHHHhcC---------CCCceeEEEECCEE
Confidence            88899999999999      999999999999999999986  21 22334445552         22379999988876


Q ss_pred             eec
Q psy3969          81 CGV   83 (86)
Q Consensus        81 iGg   83 (86)
                      +.+
T Consensus        63 l~e   65 (310)
T 3ic8_A           63 YCD   65 (310)
T ss_dssp             ECS
T ss_pred             EcC
Confidence            643

>2v6k_A Maleylpyruvate isomerase; glutathione-S-transferase, GST, plasmid, bacterial, biodegradation, fumaryl pyruvate; HET: TGG; 1.3A {Ralstonia SP} PDB: 2jl4_A*

Probab=97.06  E-value=0.0017  Score=43.39  Aligned_cols=65  Identities=15%  Similarity=0.135  Sum_probs=46.5

Q ss_pred             CcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeeee
Q psy3969           3 KPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCG   82 (86)
Q Consensus         3 ~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yiG   82 (86)
                      ++.+|+...|++      |.+++.+|..+||+|+.+.|+-...+....+..+...          ..+||-+..||..+.
T Consensus         2 ~~~Ly~~~~s~~------~~~v~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~~~P----------~g~vP~L~~~g~~l~   65 (214)
T 2v6k_A            2 KMKLYNFWRSGT------SHRLRIALNLKGVPYEYLAVHLGKEEHLKDAFKALNP----------QQLVPALDTGAQVLI   65 (214)
T ss_dssp             CCEEEECSSCHH------HHHHHHHHHHHTCCCEEEECCTTTTGGGSHHHHHHCT----------TCCSCEEECSSCEEE
T ss_pred             eeEEEecCCCCc------HHHHHHHHHHCCCCceEEecCCCcccccCHHHHhcCC----------CCcCCEEEECCEEEe
Confidence            568899888888      9999999999999999998872111223345555443          237999977766554


Q ss_pred             c
Q psy3969          83 V   83 (86)
Q Consensus        83 g   83 (86)
                      +
T Consensus        66 e   66 (214)
T 2v6k_A           66 Q   66 (214)
T ss_dssp             C
T ss_pred             c
Confidence            3

>1k0d_A URE2 protein; nitrate assimilation, structural genomics, gene regulation; HET: GSH; 2.20A {Saccharomyces cerevisiae} SCOP: a.45.1.1 c.47.1.5 PDB: 1jzr_A* 1k0b_A* 1k0c_A* 1k0a_A* 1g6w_A 1g6y_A 1hqo_A

Probab=97.01  E-value=0.0026  Score=44.48  Aligned_cols=66  Identities=12%  Similarity=0.063  Sum_probs=47.3

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEe---C
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFN---E   77 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFi---g   77 (86)
                      |..+.+|+...|++      |.+++.+|..+||+|+.+.|+-...+....+..+..          +..+||-+-.   |
T Consensus        17 m~~~~Ly~~~~~p~------~~~v~~~l~~~gi~~e~~~v~~~~~~~~~~~~~~~n----------P~g~vP~L~~~~~~   80 (260)
T 1k0d_A           17 LEGYTLFSHRSAPN------GFKVAIVLSELGFHYNTIFLDFNLGEHRAPEFVSVN----------PNARVPALIDHGMD   80 (260)
T ss_dssp             SSSEEEEECTTCHH------HHHHHHHHHHTTCCEEEEECCTTTTGGGSHHHHTTC----------TTCCSCEEEEGGGT
T ss_pred             CCcEEEEcCCCCcc------HHHHHHHHHHCCCCceEEEecCccccccCHHHHhhC----------CCCCcCEEEecCCC
Confidence            66788999988888      999999999999999998886212222334455443          2348998877   5


Q ss_pred             Ceeee
Q psy3969          78 EDYCG   82 (86)
Q Consensus        78 d~yiG   82 (86)
                      |..+.
T Consensus        81 g~~l~   85 (260)
T 1k0d_A           81 NLSIW   85 (260)
T ss_dssp             TEEEE
T ss_pred             CeEEE
Confidence            66553

>3m8n_A Possible glutathione S-transferase; PSI-II, structural genomics, protein structure initiative, nysgxrc; 2.04A {Rhodopseudomonas palustris}

Probab=97.01  E-value=0.0011  Score=45.17  Aligned_cols=66  Identities=14%  Similarity=0.098  Sum_probs=46.7

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEe-CCe
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFN-EED   79 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFi-gd~   79 (86)
                      |..+.+|+...|++      |.+++.+|+.+||+|+.+.|+-...+....+..+..          +..+||-+-. ||.
T Consensus         1 M~~~~Ly~~~~sp~------~~~vr~~L~~~gi~~e~~~v~~~~~~~~~~~~~~~~----------P~g~vP~L~~~~g~   64 (225)
T 3m8n_A            1 MSLYKLYSMQRSGN------SYKVRLALALLDAPYRAVEVDILRGESRTPDFLAKN----------PSGQVPLLETAPGR   64 (225)
T ss_dssp             -CCEEEEECTTCHH------HHHHHHHHHHTTCCEEEEECCGGGTTTSSHHHHTTC----------TTCCSSEEECSTTC
T ss_pred             CCceEEecCCCCCC------HHHHHHHHHHcCCCeEEEEeCCCCCccCCHHHHHhC----------CCCCCCEEEeCCCC
Confidence            77889999999998      999999999999999999885111122234444443          2348999986 555


Q ss_pred             eee
Q psy3969          80 YCG   82 (86)
Q Consensus        80 yiG   82 (86)
                      .+.
T Consensus        65 ~l~   67 (225)
T 3m8n_A           65 YLA   67 (225)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            543

>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A

Probab=97.00  E-value=0.00019  Score=55.92  Aligned_cols=58  Identities=17%  Similarity=0.030  Sum_probs=44.1

Q ss_pred             CcEEEEEcccCchhchHHHHHHHHHHHhC-----CCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeC
Q psy3969           3 KPYKISNTVRGVKGVKKRQQRVLMILDSK-----NIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNE   77 (86)
Q Consensus         3 ~~~~y~ss~sgn~~vK~~q~~a~~lL~~k-----~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFig   77 (86)
                      ++.+|++.-|++      |.++..+|+.+     +|.|..||++  ..++    +.++.+  .+        ++|+||+|
T Consensus       120 ~i~~f~a~~C~~------C~~~~~~l~~~a~~~~~v~~~~vd~~--~~~~----~~~~~~--i~--------svPt~~i~  177 (521)
T 1hyu_A          120 EFETYYSLSCHN------CPDVVQALNLMAVLNPRIKHTAIDGG--TFQN----EITERN--VM--------GVPAVFVN  177 (521)
T ss_dssp             EEEEEECTTCSS------HHHHHHHHHHHHHHCTTEEEEEEETT--TCHH----HHHHTT--CC--------SSSEEEET
T ss_pred             ceEEEECCCCcC------cHHHHHHHHHHHhHcCceEEEEEech--hhHH----HHHHhC--CC--------ccCEEEEC
Confidence            468899999999      88887776642     6788888887  4444    555565  33        79999999


Q ss_pred             Ceeee
Q psy3969          78 EDYCG   82 (86)
Q Consensus        78 d~yiG   82 (86)
                      |+.++
T Consensus       178 g~~~~  182 (521)
T 1hyu_A          178 GKEFG  182 (521)
T ss_dssp             TEEEE
T ss_pred             CEEEe
Confidence            99875

>2vo4_A 2,4-D inducible glutathione S-transferase; herbicide, TAU class GST, S-(P-nitrobenzyl- glutathione); HET: GTB 4NM; 1.75A {Glycine max} PDB: 3fhs_A*

Probab=96.98  E-value=0.0024  Score=43.16  Aligned_cols=65  Identities=15%  Similarity=0.114  Sum_probs=46.5

Q ss_pred             CC-CcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCe
Q psy3969           1 MK-KPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEED   79 (86)
Q Consensus         1 ~~-~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~   79 (86)
                      |. ++.+|+...|++      |.+++.+|+.+||+|+.+.++  .. ....+..+...  .       ..+||-+-.||.
T Consensus         1 M~~~~~Ly~~~~sp~------~~~v~~~L~~~gi~~e~~~v~--~~-~~~~~~~~~nP--~-------~g~vP~L~~~g~   62 (219)
T 2vo4_A            1 MQDEVVLLDFWPSPF------GMRVRIALAEKGIKYEYKEED--LR-NKSPLLLQMNP--V-------HKKIPVLIHNGK   62 (219)
T ss_dssp             CCCCEEEEECTTCHH------HHHHHHHHHHTTCCCEEEECC--TT-SCCHHHHHHCT--T-------TCCSCEEEETTE
T ss_pred             CCCceEEEeccCCch------HHHHHHHHHHcCCCceEEecC--cc-cCCHHHHHhCC--C-------CCcCCEEEECCE
Confidence            77 788999888888      999999999999999999886  21 11223333332  0       127999888877


Q ss_pred             eeec
Q psy3969          80 YCGV   83 (86)
Q Consensus        80 yiGg   83 (86)
                      .+.+
T Consensus        63 ~l~e   66 (219)
T 2vo4_A           63 PICE   66 (219)
T ss_dssp             EEES
T ss_pred             eeeh
Confidence            6643

>3lxz_A Glutathione S-transferase family protein; structural genomics, PP0183, PSI-2, protein structure initiative; 1.76A {Pseudomonas putida} PDB: 3pr8_A*

Probab=96.96  E-value=0.0015  Score=44.38  Aligned_cols=62  Identities=15%  Similarity=0.115  Sum_probs=46.5

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCee
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDY   80 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~y   80 (86)
                      |. +.+|+...|++      |.+++.+|..+||+|+.+.|.  .+  ...++.+..          +..+||-+-.+|.-
T Consensus         1 M~-~~Ly~~~~sp~------~~~v~~~L~~~gi~ye~~~v~--~~--~~~~~~~~~----------P~g~vP~L~~~~~~   59 (229)
T 3lxz_A            1 MS-LKLYGFSVSNY------YNMVKLALLEKGLTFEEVTFY--GG--QAPQALEVS----------PRGKVPVLETEHGF   59 (229)
T ss_dssp             -C-EEEEECTTCHH------HHHHHHHHHHTTCCEEEEECC--CC--SCHHHHTTS----------TTSCSCEEEETTEE
T ss_pred             Ce-EEEEeCCCCch------HHHHHHHHHHcCCCCEEEecC--CC--CCHHHHhhC----------CCCCcCeEEeCCce
Confidence            54 78999999998      999999999999999999996  22  233444443          23489999988866


Q ss_pred             eec
Q psy3969          81 CGV   83 (86)
Q Consensus        81 iGg   83 (86)
                      +.+
T Consensus        60 l~e   62 (229)
T 3lxz_A           60 LSE   62 (229)
T ss_dssp             EES
T ss_pred             eec
Confidence            543

>1b48_A GST, mgsta4-4, protein (glutathione S-transferase); subunit cooperativity; HET: HAG GSH; 2.60A {Mus musculus} SCOP: a.45.1.1 c.47.1.5 PDB: 1guk_A

Probab=96.95  E-value=0.0012  Score=44.98  Aligned_cols=66  Identities=14%  Similarity=0.079  Sum_probs=49.3

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCee
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDY   80 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~y   80 (86)
                      |.++.+|+...|++      |.+++.+|..+||+|+.+.|+  . .+...++.+...        ++...||-+-.||..
T Consensus         1 M~~~~Ly~~~~s~~------~~~v~~~L~~~gi~ye~~~v~--~-~~~~~~~~~~~~--------nP~g~vP~L~~~g~~   63 (221)
T 1b48_A            1 AAKPKLYYFNGRGR------MESIRWLLAAAGVEFEEEFLE--T-REQYEKMQKDGH--------LLFGQVPLVEIDGMM   63 (221)
T ss_dssp             CCCCEEEBCSSCTT------THHHHHHHHHHTCCCCCCBCC--C-HHHHHHHHTTTC--------SSSSCSCEEEETTEE
T ss_pred             CCceEEEEeCCCcc------hHHHHHHHHHcCCCceEEEeC--c-hHhHHHHHhcCC--------CCCCCCCEEEECCEE
Confidence            88899999999998      999999999999999999886  2 333444444300        134489999888776


Q ss_pred             eec
Q psy3969          81 CGV   83 (86)
Q Consensus        81 iGg   83 (86)
                      +..
T Consensus        64 l~e   66 (221)
T 1b48_A           64 LTQ   66 (221)
T ss_dssp             ECC
T ss_pred             Eec
Confidence            543

>1axd_A Glutathione S-transferase I; transferase, herbicide detoxification, transferase-transfera inhibitor complex; HET: GGL CYW; 2.50A {Zea mays} SCOP: a.45.1.1 c.47.1.5 PDB: 1bye_A*

Probab=96.92  E-value=0.0022  Score=42.52  Aligned_cols=64  Identities=13%  Similarity=0.047  Sum_probs=46.6

Q ss_pred             cEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeeeec
Q psy3969           4 PYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCGV   83 (86)
Q Consensus         4 ~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yiGg   83 (86)
                      ..+|++..|++      |.+++.+|..+||+|+.+.|+-...+....+..+..          +..+||-+-.||..+.+
T Consensus         3 ~~Ly~~~~sp~------~~~v~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~~~----------P~g~vP~L~~~g~~l~e   66 (209)
T 1axd_A            3 MKLYGAVMSWN------LTRCATALEEAGSDYEIVPINFATAEHKSPEHLVRN----------PFGQVPALQDGDLYLFE   66 (209)
T ss_dssp             EEEESCTTCTT------HHHHHHHHHHHTCCEEEECCCTTTTGGGSHHHHTTC----------TTCCSCEEEETTEEEES
T ss_pred             eEEEeCCCCch------HHHHHHHHHhcCCCCEEEeccccccCcCChHHHHhC----------cCCCCCeEEECCEEEec
Confidence            57888888999      999999999999999999886211122234444433          23489999888877654

>2wb9_A Glutathione transferase sigma class; thioredoxin fold; HET: GSH; 1.59A {Fasciola hepatica} PDB: 2wdu_A*

Probab=96.92  E-value=0.0024  Score=42.68  Aligned_cols=58  Identities=9%  Similarity=0.043  Sum_probs=44.3

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCC
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEE   78 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd   78 (86)
                      |..+.+|+...|++      |.+++.+|..+||+|+.+.|+  ..  .+.+..+..          +...||-+-.||
T Consensus         3 m~~~~Ly~~~~s~~------~~~v~~~L~~~gi~~e~~~v~--~~--~~~~~~~~~----------P~g~vP~L~~~~   60 (211)
T 2wb9_A            3 KQHFKLWYFQFRGR------AEPIRLLLTCAGVKFEDYQFT--MD--QWPTIKPTL----------PGGRVPLLDVTG   60 (211)
T ss_dssp             CCEEEEEEESSCGG------GHHHHHHHHHTTCCCEEEEEC--TT--THHHHGGGS----------GGGCSCEEEEEC
T ss_pred             CCceEEEEeCCCCc------hHHHHHHHHHcCCCceEEEec--hh--hHHHhCcCC----------CCCCCCEEEECC
Confidence            33678999999998      999999999999999999997  32  234444433          233799988777

>2cvd_A Glutathione-requiring prostaglandin D synthase; glutathione-S-transferase, isomerase; HET: GSH HQL; 1.45A {Homo sapiens} SCOP: a.45.1.1 c.47.1.5 PDB: 1iyi_A* 1v40_A* 1iyh_A* 3vi5_A* 3vi7_A* 2vcq_A* 2vcw_A* 2vcx_A* 2vcz_A* 2vd0_A* 2vd1_A* 3kxo_A* 3ee2_A* 1pd2_1*

Probab=96.91  E-value=0.0049  Score=40.82  Aligned_cols=61  Identities=11%  Similarity=-0.024  Sum_probs=46.6

Q ss_pred             CcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeeee
Q psy3969           3 KPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCG   82 (86)
Q Consensus         3 ~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yiG   82 (86)
                      ++.+|+...|++      |.+++.+|..+||+|+.+.|+  .  +...+..+..          +...||-+-.||..+.
T Consensus         2 ~~~Ly~~~~s~~------~~~v~~~L~~~gi~~e~~~v~--~--~~~~~~~~~~----------P~g~vP~L~~~g~~l~   61 (198)
T 2cvd_A            2 NYKLTYFNMRGR------AEIIRYIFAYLDIQYEDHRIE--Q--ADWPEIKSTL----------PFGKIPILEVDGLTLH   61 (198)
T ss_dssp             CEEEEEESSSGG------GHHHHHHHHHTTCCCEEEEEC--G--GGHHHHHTTS----------TTSCSCEEEETTEEEE
T ss_pred             CcEEEEcCCCch------HHHHHHHHHHcCCCceEEEeC--H--HHHHHhccCC----------CCCCCCEEEECCEEEe
Confidence            467899998998      999999999999999999997  3  2344444433          3348999988887664


Q ss_pred             c
Q psy3969          83 V   83 (86)
Q Consensus        83 g   83 (86)
                      +
T Consensus        62 e   62 (198)
T 2cvd_A           62 Q   62 (198)
T ss_dssp             C
T ss_pred             c
Confidence            3

>3vk9_A Glutathione S-transferase delta; glutathione binding; 2.00A {Bombyx mori}

Probab=96.91  E-value=0.0021  Score=43.62  Aligned_cols=65  Identities=11%  Similarity=-0.034  Sum_probs=47.4

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCee
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDY   80 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~y   80 (86)
                      |. ..+|++..|.+      |.++..+|+.+||+|+.+.|+-...+....+..+...          ..+||-+-.||..
T Consensus         1 M~-mkLY~~~~S~~------~~~v~~~l~~~gi~~e~~~v~~~~~~~~~~~~~~~nP----------~g~vP~L~d~g~~   63 (216)
T 3vk9_A            1 MT-IDLYYVPGSAP------CRAVLLTAKALNLNLNLKLVDLHHGEQLKPEYLKLNP----------QHTVPTLVDDGLS   63 (216)
T ss_dssp             CC-CEEEECTTCHH------HHHHHHHHHHHTCCCEEEECCGGGTGGGSHHHHHHCT----------TCCSCEEEETTEE
T ss_pred             CC-EEEEeCCCChh------HHHHHHHHHHcCCCCEEEEeCCCCCccCCHHHHHhCC----------CCccceEecCCce
Confidence            55 68999999988      9999999999999999877642123333455555542          3379999888776


Q ss_pred             ee
Q psy3969          81 CG   82 (86)
Q Consensus        81 iG   82 (86)
                      +.
T Consensus        64 l~   65 (216)
T 3vk9_A           64 IW   65 (216)
T ss_dssp             EC
T ss_pred             ee
Confidence            54

>1nhy_A EF-1-gamma 1, elongation factor 1-gamma 1; protein synthesis, GST-like, translation; 3.00A {Saccharomyces cerevisiae} SCOP: a.45.1.1 c.47.1.5

Probab=96.91  E-value=0.0015  Score=43.86  Aligned_cols=60  Identities=8%  Similarity=-0.014  Sum_probs=44.0

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEe-CCe
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFN-EED   79 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFi-gd~   79 (86)
                      |+++.+|+ +.|++      |.+++.+|+.+||+|+.+.++  ..++   +..+...          ...||-+-. ||.
T Consensus         1 M~~~~Ly~-~~~~~------~~~v~~~l~~~gi~~e~~~~~--~~~~---~~~~~nP----------~g~vP~L~~~~g~   58 (219)
T 1nhy_A            1 MSQGTLYA-NFRIR------TWVPRGLVKALKLDVKVVTPD--AAAE---QFARDFP----------LKKVPAFVGPKGY   58 (219)
T ss_dssp             CTTCEEEC-CSSHH------HHHHHHHHHHHTCCCEEECGG--GCHH---HHHHHCT----------TCCSSEEECGGGC
T ss_pred             CCceEEec-CCCCC------hHHHHHHHHHcCCCceeeccc--CCCH---HHHHHCC----------CCCCCeEEcCCCC
Confidence            88999999 66666      999999999999999999986  2222   3334332          237998887 665


Q ss_pred             eee
Q psy3969          80 YCG   82 (86)
Q Consensus        80 yiG   82 (86)
                      .+.
T Consensus        59 ~l~   61 (219)
T 1nhy_A           59 KLT   61 (219)
T ss_dssp             EEE
T ss_pred             EEe
Confidence            554

>3gtu_B Glutathione S-transferase; conjugation, detoxification, cytosolic, heterodimer; 2.80A {Homo sapiens} SCOP: a.45.1.1 c.47.1.5

Probab=96.90  E-value=0.0061  Score=41.33  Aligned_cols=69  Identities=12%  Similarity=0.136  Sum_probs=46.9

Q ss_pred             CCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHh--HHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCe
Q psy3969           2 KKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKEN--EKEFMQQNSKATPSDSTVKSNPLPPQIFNEED   79 (86)
Q Consensus         2 ~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~--~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~   79 (86)
                      +++.+|+...|++      |.+++.+|+.+||+|+.+.|+-...++  .-++......  .    +++...||-+-.||.
T Consensus         4 ~~~~Ly~~~~s~~------~~~vr~~L~~~gi~ye~~~v~~~~~~~~~~~~~~~~~~~--~----~~P~g~vP~L~d~g~   71 (224)
T 3gtu_B            4 SSMVLGYWDIRGL------AHAIRLLLEFTDTSYEEKRYTCGEAPDYDRSQWLDVKFK--L----DLDFPNLPYLLDGKN   71 (224)
T ss_dssp             CCEEEEEESSSGG------GHHHHHHHHHTTCCEEEEEECCCCSSSCCCHHHHHHHTT--S----CCSSCCSSEEEETTE
T ss_pred             CCcEEEEeCCCcc------hHHHHHHHHHcCCCceEEEeecCCcccccHHHHHhhhhh--c----CCCCCCCCEEEECCE
Confidence            5788999999998      999999999999999999986211111  1223332211  0    024458999977776


Q ss_pred             eee
Q psy3969          80 YCG   82 (86)
Q Consensus        80 yiG   82 (86)
                      .+.
T Consensus        72 ~l~   74 (224)
T 3gtu_B           72 KIT   74 (224)
T ss_dssp             EEE
T ss_pred             Eee
Confidence            554

>1oyj_A Glutathione S-transferase; herbicide detoxification; HET: GSH; 1.95A {Oryza sativa} SCOP: a.45.1.1 c.47.1.5

Probab=96.88  E-value=0.0023  Score=43.76  Aligned_cols=64  Identities=11%  Similarity=0.113  Sum_probs=46.6

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCC-CCCCeEEeCCe
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSN-PLPPQIFNEED   79 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~-~tvPQIFigd~   79 (86)
                      |.++.+|+...|++      |.+++.+|..+||+|+.+.|+  .. ....+..+...          . .+||-+-.||.
T Consensus         4 ~~~~~Ly~~~~sp~------~~~v~~~L~~~gi~~e~~~v~--~~-~~~~~~~~~nP----------~~g~vP~L~~~g~   64 (231)
T 1oyj_A            4 EKELVLLDFWVSPF------GQRCRIAMAEKGLEFEYREED--LG-NKSDLLLRSNP----------VHRKIPVLLHAGR   64 (231)
T ss_dssp             SCCEEEEECTTCHH------HHHHHHHHHHHTCCCEEEECC--TT-SCCHHHHHHST----------TTCCSCEEEETTE
T ss_pred             CCceEEEeCCCChH------HHHHHHHHHHCCCCCeEEecC--cc-cCCHHHHhhCC----------CCCCCCEEEECCE
Confidence            56788999988887      999999999999999999886  21 11223333332          2 27999988877


Q ss_pred             eeec
Q psy3969          80 YCGV   83 (86)
Q Consensus        80 yiGg   83 (86)
                      .+.+
T Consensus        65 ~l~e   68 (231)
T 1oyj_A           65 PVSE   68 (231)
T ss_dssp             EEES
T ss_pred             EEec
Confidence            6543

>4ags_A Thiol-dependent reductase 1; transferase, leishmaniasis, DE-gluathionylation; HET: MSE GSH; 2.30A {Leishmania infantum}

Probab=96.85  E-value=0.0025  Score=47.92  Aligned_cols=60  Identities=12%  Similarity=0.145  Sum_probs=46.3

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCC
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEE   78 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd   78 (86)
                      |.++.+|+...|++      |.++..+|..+||+|+.+.|+  ..+....+..+..+          ..+||-+-.+|
T Consensus        24 ~~~~~Ly~~~~sp~------~~~v~~~L~~~gi~~e~~~v~--~~~~~~~~~~~~nP----------~g~vP~L~~~~   83 (471)
T 4ags_A           24 ARALKLYVSATCPF------CHRVEIVAREKQVSYDRVAVG--LREEMPQWYKQINP----------RETVPTLEVGN   83 (471)
T ss_dssp             -CCEEEEECTTCHH------HHHHHHHHHHTTCCCEEEECC--CGGGCCHHHHHHCT----------TCCSCEEEECS
T ss_pred             CCceEEECCCCCch------HHHHHHHHHHcCCCCEEEEeC--CCCCccHHHHhhCC----------CCccCeEEECC
Confidence            46788999988888      999999999999999999997  33323444555543          23799999887

>4exj_A Uncharacterized protein; transferase-like protein, transcription regulation, transfer structural genomics; 1.64A {Lodderomyces elongisporus nrrl yb-4239}

Probab=96.84  E-value=0.0046  Score=42.52  Aligned_cols=64  Identities=13%  Similarity=0.156  Sum_probs=45.4

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCC-e
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEE-D   79 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd-~   79 (86)
                      |+.+.+|+.. |++      |.+++.+|..+||+|+.+.|+-...+....+..+...          ..+||-+-.+| .
T Consensus         1 Ms~~lLy~~~-s~~------~~~vr~~L~~~gi~ye~~~v~~~~~~~~~~~~~~~~P----------~g~vPvL~~~dg~   63 (238)
T 4exj_A            1 MVMAILYTGP-TGN------GRKPLVLGKLLNAPIKVHMFHWPTKDIQEDWYLKLNP----------AGIVPTLVDDKGT   63 (238)
T ss_dssp             -CCEEEEECS-STT------THHHHHHHHHTTCSEEEEECC-CCSGGGSHHHHHHCT----------TCCSCEEECTTSC
T ss_pred             CCceeEeeCC-CCc------hHHHHHHHHHcCCCceEEEecccCCccCCHHHHhhCC----------CCCCCEEEeCCCc
Confidence            7777778777 999      9999999999999999998862222344455555553          23799998754 5


Q ss_pred             ee
Q psy3969          80 YC   81 (86)
Q Consensus        80 yi   81 (86)
                      .+
T Consensus        64 ~l   65 (238)
T 4exj_A           64 PI   65 (238)
T ss_dssp             EE
T ss_pred             EE
Confidence            44

>3ubk_A Glutathione transferase; GSH binding; 1.95A {Leptospira interrogans serovar lai} PDB: 3ubl_A*

Probab=96.84  E-value=0.0009  Score=46.25  Aligned_cols=62  Identities=15%  Similarity=0.096  Sum_probs=47.0

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCee
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDY   80 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~y   80 (86)
                      |+.+.+|+...|++      |.+++.+|+.+||+|+.+.|.  .+  ...+..+..          +..+||-+-.||..
T Consensus         1 M~~~~Ly~~~~sp~------~~~v~~~L~~~gi~ye~~~v~--~~--~~~~~~~~n----------P~g~vPvL~~~~~~   60 (242)
T 3ubk_A            1 MVMIKLHGASISNY------VNKVKLGILEKGLEYEQIRIA--PS--QEEDFLKIS----------PMGKIPVLEMDGKF   60 (242)
T ss_dssp             -CCEEEESCTTCHH------HHHHHHHHHHHTCCEEEECCC--CC--CCHHHHTTS----------TTCCSCEEEETTEE
T ss_pred             CCeEEEEeCCCChH------HHHHHHHHHHcCCCcEEEecC--Cc--cCHHHHhcC----------CCCCcCeEEECCce
Confidence            78889999999998      999999999999999999996  22  123344433          23489999988765


Q ss_pred             ee
Q psy3969          81 CG   82 (86)
Q Consensus        81 iG   82 (86)
                      +.
T Consensus        61 l~   62 (242)
T 3ubk_A           61 IF   62 (242)
T ss_dssp             EC
T ss_pred             Ee
Confidence            43

>3n5o_A Glutathione transferase; seattle structural genomics center for infectious disease, S GST, pathogenic fungus, coccidioidomycosis; HET: GSH; 1.85A {Coccidioides immitis} PDB: 3lg6_A*

Probab=96.80  E-value=0.0027  Score=43.20  Aligned_cols=62  Identities=13%  Similarity=0.073  Sum_probs=44.3

Q ss_pred             CCC--cEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCC
Q psy3969           1 MKK--PYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEE   78 (86)
Q Consensus         1 ~~~--~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd   78 (86)
                      |+.  +.+|+...|++      |.+++.+|+.+||+|+.+.|+-...+....+..+...          ..+||-+-.+|
T Consensus         5 Ms~~~~~Ly~~~~s~~------~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~nP----------~g~vP~L~~~~   68 (235)
T 3n5o_A            5 MTTPNFELYGYFRSSC------SGRLRIAFHLKSIPYTRHPVNLLKGEQHSDTYKSLNP----------TNTVPLLVVSN   68 (235)
T ss_dssp             --CCEEEEEECTTCHH------HHHHHHHHHHTTCCCEEEECCGGGTGGGSHHHHHHCT----------TCCSCEEEEES
T ss_pred             cCCCCeEEEecCCCcH------HHHHHHHHHHcCCccEEEecccccccccCHHHHhcCC----------CCCCCEEEeCC
Confidence            554  78888888888      9999999999999999998852112233345555543          33799998877

>1ljr_A HGST T2-2, glutathione S-transferase; HET: GSH; 3.20A {Homo sapiens} SCOP: a.45.1.1 c.47.1.5 PDB: 2ljr_A 3ljr_A*

Probab=96.80  E-value=0.0049  Score=42.54  Aligned_cols=64  Identities=9%  Similarity=-0.010  Sum_probs=46.4

Q ss_pred             cEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeeeec
Q psy3969           4 PYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCGV   83 (86)
Q Consensus         4 ~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yiGg   83 (86)
                      +.+|++..|++      |.+++.+|+.+||+|+.+.|+-...+....+..+..          +...||-+-.||..+.+
T Consensus         3 ~~Ly~~~~sp~------~~~v~~~L~~~gi~ye~~~v~~~~~~~~~~~~~~~n----------P~g~vP~L~d~g~~l~e   66 (244)
T 1ljr_A            3 LELFLDLVSQP------SRAVYIFAKKNGIPLELRTVDLVKGQHKSKEFLQIN----------SLGKLPTLKDGDFILTE   66 (244)
T ss_dssp             CEEEECTTSHH------HHHHHHHHHHTTCCCEEEECCTTTTGGGSHHHHTTC----------TTCCSCEEEETTEEEEC
T ss_pred             EEEEecCCCcc------hHHHHHHHHHcCCCCeEEEecccccccCCHHHHHhC----------CCCcCcEEEECCEEEEc
Confidence            67899888888      999999999999999999987211122234444433          23489999888877654

>4iel_A Glutathione S-transferase, N-terminal domain PROT; GST, glutathione S-transferase, enzyme function initiative, structural genomics; HET: GSH; 1.60A {Burkholderia ambifaria}

Probab=96.80  E-value=0.0015  Score=44.69  Aligned_cols=66  Identities=12%  Similarity=-0.011  Sum_probs=46.1

Q ss_pred             CCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeee
Q psy3969           2 KKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYC   81 (86)
Q Consensus         2 ~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yi   81 (86)
                      .-+.+|+...|++      |.+++.+|+.+||+|+.+.|+-...+....+..+..          +..+||-+-.||..+
T Consensus        22 ~m~~Ly~~~~sp~------~~~vr~~L~~~gi~ye~~~v~~~~~~~~~~~~~~~~----------P~g~vP~L~~~g~~l   85 (229)
T 4iel_A           22 SMLHILGKIPSIN------VRKVLWLCTELNLPFEQEDWGAGFRTTNDPAYLALN----------PNGLVPVIKDDGFVL   85 (229)
T ss_dssp             CCEEEESCTTCHH------HHHHHHHHHHHTCCEEEECCC-------CHHHHTTC----------TTCCSCEEEETTEEE
T ss_pred             ceEEEecCCCCcc------hHHHHHHHHHCCCCcEEEEecCCcCCcCCHHHHhcC----------CCCCCCEEEECCEEE
Confidence            4467888888988      999999999999999999886211122333444433          334899999988776


Q ss_pred             ec
Q psy3969          82 GV   83 (86)
Q Consensus        82 Gg   83 (86)
                      .+
T Consensus        86 ~e   87 (229)
T 4iel_A           86 WE   87 (229)
T ss_dssp             EC
T ss_pred             Ee
Confidence            54

>1pn9_A GST class-delta, glutathione S-transferase 1-6; protein inhibitor complex; HET: GTX; 2.00A {Anopheles gambiae} SCOP: a.45.1.1 c.47.1.5

Probab=96.78  E-value=0.0041  Score=41.67  Aligned_cols=63  Identities=8%  Similarity=-0.132  Sum_probs=45.3

Q ss_pred             EEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeeeec
Q psy3969           5 YKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCGV   83 (86)
Q Consensus         5 ~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yiGg   83 (86)
                      .+|+...|++      |.+++.+|+.+||+|+.+.|+-...+....+..+...          ..+||-+-.||..+.+
T Consensus         2 ~Ly~~~~sp~------~~~v~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~~~P----------~g~vP~L~~~g~~l~e   64 (209)
T 1pn9_A            2 DFYYLPGSAP------CRAVQMTAAAVGVELNLKLTDLMKGEHMKPEFLKLNP----------QHCIPTLVDNGFALWE   64 (209)
T ss_dssp             EEEECTTCHH------HHHHHHHHHHTTCCCEEEECCGGGTGGGSHHHHHHCT----------TCCSSEEEETTEEEES
T ss_pred             eEEeCCCCcc------HHHHHHHHHHcCCCcEEEEecccCCCcCCHHHHhhCC----------CCCCCEEEECCEEEEe
Confidence            5888888888      9999999999999999988861112222245555443          2379999888876654

>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1

Probab=96.77  E-value=0.00044  Score=39.75  Aligned_cols=60  Identities=10%  Similarity=0.108  Sum_probs=40.3

Q ss_pred             CCcEEEEEcccCchhchHHHHHHHHHHHh----C--CCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEE
Q psy3969           2 KKPYKISNTVRGVKGVKKRQQRVLMILDS----K--NIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIF   75 (86)
Q Consensus         2 ~~~~~y~ss~sgn~~vK~~q~~a~~lL~~----k--~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIF   75 (86)
                      ..+.+|+++-|+.      |.++...|+.    .  ++.|..+|++  .+++.    .++.|          -..+|.++
T Consensus         4 ~~vv~f~~~~C~~------C~~~~~~l~~~~~~~~~~~~~~~vd~~--~~~~~----~~~~~----------v~~~Pt~~   61 (85)
T 1fo5_A            4 VKIELFTSPMCPH------CPAAKRVVEEVANEMPDAVEVEYINVM--ENPQK----AMEYG----------IMAVPTIV   61 (85)
T ss_dssp             EEEEEEECCCSSC------CCTHHHHHHHHHHHCSSSEEEEEEESS--SSCCT----TTSTT----------TCCSSEEE
T ss_pred             eEEEEEeCCCCCc------hHHHHHHHHHHHHHcCCceEEEEEECC--CCHHH----HHHCC----------CcccCEEE
Confidence            3467889998998      6666555554    2  7899999998  45432    22223          23689999


Q ss_pred             eCCe--eeec
Q psy3969          76 NEED--YCGV   83 (86)
Q Consensus        76 igd~--yiGg   83 (86)
                      ++|+  +.|.
T Consensus        62 ~~G~~~~~G~   71 (85)
T 1fo5_A           62 INGDVEFIGA   71 (85)
T ss_dssp             ETTEEECCSS
T ss_pred             ECCEEeeecC
Confidence            9888  5664

>2ahe_A Chloride intracellular channel protein 4; glutathione-S-transferase superfamily, CLIC4, NCC27, chloride ION channel, metal transport; 1.80A {Homo sapiens} PDB: 2d2z_A

Probab=96.75  E-value=0.002  Score=45.88  Aligned_cols=64  Identities=19%  Similarity=0.083  Sum_probs=44.4

Q ss_pred             CCCcEEEE--------EcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCC
Q psy3969           1 MKKPYKIS--------NTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPP   72 (86)
Q Consensus         1 ~~~~~~y~--------ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvP   72 (86)
                      |..+.+|+        ...|.+      |++++.+|..+||+|+.+.|+  .. ....+..+...          ...||
T Consensus        16 ~~~i~ly~~~~~~~~~~~~~p~------~~rv~~~L~~~gi~ye~~~v~--~~-~~~~~~~~~nP----------~gkVP   76 (267)
T 2ahe_A           16 EPLIELFVKAGSDGESIGNCPF------SQRLFMILWLKGVVFSVTTVD--LK-RKPADLQNLAP----------GTHPP   76 (267)
T ss_dssp             CCCEEEEEEBCTTSSSBCSCHH------HHHHHHHHHHHTCCCEEEEEC--TT-SCCHHHHHHST----------TCCSC
T ss_pred             CCCEEEEEecCCCccCCCCCch------HHHHHHHHHHcCCCCEEEEeC--cc-cChHHHHHhCC----------CCCCC
Confidence            56778885        334444      999999999999999999886  22 11233444442          23799


Q ss_pred             eEEeCCeeeec
Q psy3969          73 QIFNEEDYCGV   83 (86)
Q Consensus        73 QIFigd~yiGg   83 (86)
                      -+..||..+..
T Consensus        77 vL~~~g~~l~E   87 (267)
T 2ahe_A           77 FITFNSEVKTD   87 (267)
T ss_dssp             EEEETTEEECC
T ss_pred             EEEECCEEecC
Confidence            99988876643

>3m0f_A Uncharacterized protein GST_N; PSI-2, NYSGXRC, glutathione, structural genomics, protein structure initiative; HET: GSH; 1.60A {Pseudomonas fluorescens} PDB: 3lxt_A*

Probab=96.73  E-value=0.0024  Score=42.70  Aligned_cols=62  Identities=13%  Similarity=0.032  Sum_probs=44.9

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEE-eCCe
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIF-NEED   79 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIF-igd~   79 (86)
                      |+ ..+|+...|++      |.+++.+|+.+||+|+.+.|+  ... ...+..+...          ...||-+. .||.
T Consensus         1 M~-~~Ly~~~~sp~------~~~v~~~l~~~gi~~e~~~v~--~~~-~~~~~~~~nP----------~g~vP~L~~~~g~   60 (213)
T 3m0f_A            1 MS-LKLIGMLDSPY------VRRVAISLKSLGLPFEHHSLS--VFS-TFEQFKAINP----------VVKAPTLVCEGGE   60 (213)
T ss_dssp             ---CEEESCTTSHH------HHHHHHHHHHHTCCCEEECCC--TTT-THHHHHHHCT----------TCCSSEEECTTCC
T ss_pred             Ce-EEEecCCCCCc------HHHHHHHHHHCCCCcEEEEec--CCC-CcHHHHhcCC----------CCCcCeEEeCCCc
Confidence            55 78898888888      999999999999999999886  222 2445555543          23799997 5665


Q ss_pred             eee
Q psy3969          80 YCG   82 (86)
Q Consensus        80 yiG   82 (86)
                      .+.
T Consensus        61 ~l~   63 (213)
T 3m0f_A           61 VLM   63 (213)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            554

>1m0u_A GST2 gene product; flight muscle protein, sigma, transferase; HET: GSH; 1.75A {Drosophila melanogaster} SCOP: a.45.1.1 c.47.1.5

Probab=96.72  E-value=0.0041  Score=43.97  Aligned_cols=62  Identities=10%  Similarity=0.061  Sum_probs=47.4

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCee
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDY   80 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~y   80 (86)
                      |.++.+|+...|++      |.+++.+|..+||+|+.+.|+  .+  ...+..+..          +...||-+-.||..
T Consensus        47 m~~~~Ly~~~~s~~------~~~vr~~L~~~gi~ye~~~v~--~~--~~~e~~~~n----------P~gkVPvL~~~g~~  106 (249)
T 1m0u_A           47 KHSYTLFYFNVKAL------AEPLRYLFAYGNQEYEDVRVT--RD--EWPALKPTM----------PMGQMPVLEVDGKR  106 (249)
T ss_dssp             CCCEEEEEESSSGG------GHHHHHHHHHHTCCCEEEEEC--TT--THHHHGGGS----------GGGCSCEEEETTEE
T ss_pred             CCCeEEEEcCCccc------HHHHHHHHHHcCCCcEEEEeC--HH--HHHHHhhcC----------CCCCCCEEEECCEE
Confidence            66788999998998      999999999999999999997  32  234444433          22379998888766


Q ss_pred             ee
Q psy3969          81 CG   82 (86)
Q Consensus        81 iG   82 (86)
                      +.
T Consensus       107 l~  108 (249)
T 1m0u_A          107 VH  108 (249)
T ss_dssp             EE
T ss_pred             Ee
Confidence            54

>3ibh_A GST-II, saccharomyces cerevisiae GTT2; glutathione S-transferase, transferase; HET: GSH; 2.10A {Saccharomyces cerevisiae} PDB: 3erf_A* 3erg_A*

Probab=96.70  E-value=0.0036  Score=42.14  Aligned_cols=64  Identities=16%  Similarity=0.112  Sum_probs=45.4

Q ss_pred             CcEEEEEcccCchhchHHHHHHHHHHHhCCC--ceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEE-eCCe
Q psy3969           3 KPYKISNTVRGVKGVKKRQQRVLMILDSKNI--DYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIF-NEED   79 (86)
Q Consensus         3 ~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I--~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIF-igd~   79 (86)
                      ++.+|+...|++      |.+++.+|..+||  +|+.+.|+-...+....+..+...          ..+||-+- .||.
T Consensus        18 ~~~Ly~~~~sp~------~~~v~~~L~~~gi~~~~~~~~v~~~~~~~~~~~~~~~nP----------~g~vP~L~~~~g~   81 (233)
T 3ibh_A           18 KMIIYDTPAGPY------PARVRIALAEKNMLSSVQFVRINLWKGEHKKPEFLAKNY----------SGTVPVLELDDGT   81 (233)
T ss_dssp             -CEEEECTTCHH------HHHHHHHHHHTTCGGGCEEEECCGGGTGGGSHHHHHHCT----------TCCSCEEECTTCC
T ss_pred             ceEEecCCCCCc------cHHHHHHHHhcCCCCCceEEEeccccccccChHHhccCC----------CCccceEEecCCe
Confidence            578999888888      9999999999999  999888862122223345555443          33899998 5666


Q ss_pred             eee
Q psy3969          80 YCG   82 (86)
Q Consensus        80 yiG   82 (86)
                      .+.
T Consensus        82 ~l~   84 (233)
T 3ibh_A           82 LIA   84 (233)
T ss_dssp             EEE
T ss_pred             EEe
Confidence            554

>4hz2_A Glutathione S-transferase domain; glutathione,enzyme function initiative; HET: GSH; 1.50A {Xanthobacter autotrophicus}

Probab=96.66  E-value=0.005  Score=42.15  Aligned_cols=63  Identities=8%  Similarity=-0.004  Sum_probs=45.9

Q ss_pred             cEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEE-eCCeeee
Q psy3969           4 PYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIF-NEEDYCG   82 (86)
Q Consensus         4 ~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIF-igd~yiG   82 (86)
                      ..+|+...|++      |.+++.+|..+||+|+.+.|+-...+....+..+...          ..+||-+. .||..+.
T Consensus        23 ~~Ly~~~~sp~------~~~vr~~L~~~gi~~e~~~v~~~~~~~~~~~~~~~~P----------~g~vPvL~~~~g~~l~   86 (230)
T 4hz2_A           23 MRIYGMNGSGN------CWKAAQILSLTGHDFEWVETSSGAAGTRSADFLALNA----------IGKVPVVVLDDGTALR   86 (230)
T ss_dssp             CEEEECTTCHH------HHHHHHHHHHTTCCCEEEECCSSTTTTTSHHHHHHCT----------TCCSCEEECTTSCEEE
T ss_pred             heeeCCCCCcc------HHHHHHHHHHcCCCceEEEecCCCCccCCHHHHhhCC----------CCCCCEEEecCCEEee
Confidence            57899989988      9999999999999999998862122233445555443          23799998 6666554

>3lyk_A Stringent starvation protein A homolog; structural genomics, GST-superfamily, SSPA, PSI-2, protein structure initiative; 2.10A {Haemophilus influenzae}

Probab=96.66  E-value=0.0036  Score=42.24  Aligned_cols=61  Identities=13%  Similarity=0.031  Sum_probs=45.3

Q ss_pred             cEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeeeec
Q psy3969           4 PYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCGV   83 (86)
Q Consensus         4 ~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yiGg   83 (86)
                      +.+|+...|++      |.+++.+|..+||+|+.+.|+  .. ....+..+...          ..+||-+..||..+.+
T Consensus         7 ~~Ly~~~~sp~------~~~v~~~L~~~gi~~e~~~v~--~~-~~~~~~~~~~P----------~g~vP~L~~~g~~l~e   67 (216)
T 3lyk_A            7 MTLFSNKDDIY------CHQVKIVLAEKGVLYENAEVD--LQ-ALPEDLMELNP----------YGTVPTLVDRDLVLFN   67 (216)
T ss_dssp             EEEEECTTCHH------HHHHHHHHHHHTCCCEEEECC--TT-SCCHHHHHHCT----------TCCSCEEEETTEEEES
T ss_pred             EEEEeCCCChh------HHHHHHHHHHcCCCcEEEeCC--cc-cCcHHHHhhCC----------CCCcCeEEECCeEecC
Confidence            45888888888      999999999999999999987  22 12234444443          2379999988876643

>1z9h_A Membrane-associated prostaglandin E synthase-2; membran associated protein, indomethacin, isomerase; HET: IMN; 2.60A {Macaca fascicularis} SCOP: a.45.1.1 c.47.1.5 PDB: 2pbj_A*

Probab=96.65  E-value=0.0036  Score=44.70  Aligned_cols=54  Identities=13%  Similarity=0.129  Sum_probs=40.5

Q ss_pred             CcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeC
Q psy3969           3 KPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNE   77 (86)
Q Consensus         3 ~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFig   77 (86)
                      .+.+|+...|++      |.+++.+|+.+||+|+.++|+. ..   +.++ +.          ++..+||.|..+
T Consensus        14 ~~~Ly~~~~sp~------~~~v~~~L~~~gi~~~~~~v~~-~~---~~~~-~~----------~p~~~vP~l~~~   67 (290)
T 1z9h_A           14 QLTLYQYKTCPF------CSKVRAFLDFHALPYQVVEVNP-VL---RAEI-KF----------SSYRKVPILVAQ   67 (290)
T ss_dssp             EEEEEECTTCHH------HHHHHHHHHHTTCCEEEEECCT-TT---CGGG-TT----------CSCCSSCEEEEE
T ss_pred             CEEEEeCCCChH------HHHHHHHHHHcCCCeEEEECCh-hh---HHHH-HH----------cCCCCCCEEEEC
Confidence            467888888888      9999999999999999999961 11   1122 12          245589999874

>1aw9_A Glutathione S-transferase III; herbicide detoxification; 2.20A {Zea mays} SCOP: a.45.1.1 c.47.1.5

Probab=96.63  E-value=0.001  Score=44.53  Aligned_cols=65  Identities=9%  Similarity=0.086  Sum_probs=45.0

Q ss_pred             CcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeeee
Q psy3969           3 KPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCG   82 (86)
Q Consensus         3 ~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yiG   82 (86)
                      +..+|++..|++      |.+++.+|..+||+|+.+.|+-...+....++.+..          +..+||-+-.||..+.
T Consensus         2 ~~~Ly~~~~sp~------~~~v~~~L~~~gi~ye~~~v~~~~~~~~~~~~~~~~----------P~g~vP~L~~~g~~l~   65 (216)
T 1aw9_A            2 PLKLYGMPLSPN------VVRVATVLNEKGLDFEIVPVDLTTGAHKQPDFLALN----------PFGQIPALVDGDEVLF   65 (216)
T ss_dssp             CEEEESCTTCHH------HHHHHHHHHHTTCCEEEECCCSSTTSSCCCSGGGTC----------TTCCSCEEEETTEEEE
T ss_pred             ceEEEecCCCcc------HHHHHHHHHHcCCccEEEecCccccccCCHHHHHhC----------CCCCcCEEEECCEEee
Confidence            357888888888      999999999999999999886211111112222222          3448999998887765


Q ss_pred             c
Q psy3969          83 V   83 (86)
Q Consensus        83 g   83 (86)
                      +
T Consensus        66 e   66 (216)
T 1aw9_A           66 E   66 (216)
T ss_dssp             S
T ss_pred             C
Confidence            4

>1r5a_A Glutathione transferase; glutathione S-transferase, GST, GSH, mosquito, detoxification, xenobiotics; HET: GTS; 2.50A {Anopheles cracens} SCOP: a.45.1.1 c.47.1.5

Probab=96.61  E-value=0.008  Score=40.47  Aligned_cols=64  Identities=8%  Similarity=-0.075  Sum_probs=45.7

Q ss_pred             cEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeeeec
Q psy3969           4 PYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCGV   83 (86)
Q Consensus         4 ~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yiGg   83 (86)
                      +.+|+...|++      |.+++.+|+.+||+|+.+.|+-...+....+..+..          +...||-+-.||..+.+
T Consensus         3 ~~Ly~~~~sp~------~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~n----------P~g~vP~L~~~g~~l~e   66 (218)
T 1r5a_A            3 TVLYYLPASPP------CRSVLLLAKMIGVELDLKVLNIMEGEQLKPDFVELN----------PQHCIPTMDDHGLVLWE   66 (218)
T ss_dssp             EEEEECTTCHH------HHHHHHHHHHTTCCEEEEECCTTTTGGGSHHHHTTC----------TTCCSSEEEETTEEEEC
T ss_pred             EEEEeCCCChh------HHHHHHHHHHcCCCCeEEecCcccccccCHHHHhhC----------CCCCcCEEEECCEEEEc
Confidence            67899888888      999999999999999999987211122224444433          23479999887766543

>4hoj_A REGF protein; GST, glutathione S-transferase, enzyme function initiative, structural genomics, transferase; HET: GSH; 1.40A {Neisseria gonorrhoeae}

Probab=96.61  E-value=0.003  Score=42.50  Aligned_cols=63  Identities=17%  Similarity=0.123  Sum_probs=45.1

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCee
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDY   80 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~y   80 (86)
                      |.-..+|.+..|.+      |+|+..+|..+||+|+.+.|+-...+   ++..+...          ...||-+-.||..
T Consensus         1 M~Mm~LY~~~~sP~------~~rvr~~L~e~gi~~e~~~v~~~~~~---~~~~~~nP----------~g~vPvL~~~~~~   61 (210)
T 4hoj_A            1 MVMMTLYSGITCPF------SHRCRFVLYEKGMDFEIKDIDIYNKP---EDLAVMNP----------YNQVPVLVERDLV   61 (210)
T ss_dssp             ---CEEEECTTCHH------HHHHHHHHHHHTCCCEEEECCTTSCC---HHHHHHCT----------TCCSCEEEETTEE
T ss_pred             CceEEEecCCCChH------HHHHHHHHHHcCCCCEEEEeCCCCCC---HHHHHHCC----------CCCCcEEEECCEE
Confidence            66678999999999      99999999999999999888621222   23444442          3379999888776


Q ss_pred             ee
Q psy3969          81 CG   82 (86)
Q Consensus        81 iG   82 (86)
                      +.
T Consensus        62 l~   63 (210)
T 4hoj_A           62 LH   63 (210)
T ss_dssp             EE
T ss_pred             Ee
Confidence            54

>3ein_A GST class-theta, glutathione S-transferase 1-1; delta-class GST; HET: GSH; 1.13A {Drosophila melanogaster} PDB: 3mak_A* 3f6f_A 3gh6_A* 1jlv_A*

Probab=96.61  E-value=0.0039  Score=41.55  Aligned_cols=64  Identities=8%  Similarity=-0.086  Sum_probs=46.4

Q ss_pred             cEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeeeec
Q psy3969           4 PYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCGV   83 (86)
Q Consensus         4 ~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yiGg   83 (86)
                      ..+|+...|++      |.++..+|+.+||+|+.+.|+-...+....+..+..          +..+||-+..||..+.+
T Consensus         2 ~~Ly~~~~s~~------~~~v~~~l~~~gi~~e~~~v~~~~~~~~~~~~~~~~----------P~g~vP~L~~~g~~l~e   65 (209)
T 3ein_A            2 VDFYYLPGSSP------CRSVIMTAKAVGVELNKKLLNLQAGEHLKPEFLKIN----------PQHTIPTLVDNGFALWE   65 (209)
T ss_dssp             CEEEECTTCHH------HHHHHHHHHHHTCCCEEEECCGGGTGGGSHHHHTTC----------TTCCSCEEEETTEEEEC
T ss_pred             eEEecCCCCcc------HHHHHHHHHHcCCCcEEEEcccccCCcCCHHHHhcC----------CCCCCCEEEECCEEEEc
Confidence            46899999988      999999999999999998886212222344555443          33489999888876643

>1yy7_A SSPA, stringent starvation protein A; GST fold, transcription; HET: CIT; 2.02A {Yersinia pestis}

Probab=96.60  E-value=0.0052  Score=41.35  Aligned_cols=62  Identities=11%  Similarity=0.071  Sum_probs=45.8

Q ss_pred             CcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeeee
Q psy3969           3 KPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCG   82 (86)
Q Consensus         3 ~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yiG   82 (86)
                      .+.+|+...|++      |.+++.+|..+||+|+.+.|+  . +....+..+...          ..+||-+-.||..+.
T Consensus        10 ~~~Ly~~~~s~~------~~~v~~~L~~~gi~~e~~~v~--~-~~~~~~~~~~~P----------~g~vP~L~~~g~~l~   70 (213)
T 1yy7_A           10 VMTLFSGPTDIF------SHQVRIVLAEKGVSVEIEQVE--A-DNLPQDLIDLNP----------YRTVPTLVDRELTLY   70 (213)
T ss_dssp             SEEEEECTTCHH------HHHHHHHHHHHTCCEEEEECC--T-TSCCHHHHHHCT----------TCCSSEEEETTEEEE
T ss_pred             ceEEEcCCCChh------HHHHHHHHHHcCCCCeEEeCC--c-ccCcHHHHHHCC----------CCCCCEEEECCEEEe
Confidence            467888888877      999999999999999999997  2 112234444442          237999988887665


Q ss_pred             c
Q psy3969          83 V   83 (86)
Q Consensus        83 g   83 (86)
                      +
T Consensus        71 e   71 (213)
T 1yy7_A           71 E   71 (213)
T ss_dssp             S
T ss_pred             c
Confidence            4

>1v2a_A Glutathione transferase GST1-6; glutathione S-transferase, detoxification, xenobiotics; HET: GTS; 2.15A {Anopheles dirus} SCOP: a.45.1.1 c.47.1.5

Probab=96.59  E-value=0.011  Score=39.46  Aligned_cols=62  Identities=6%  Similarity=0.041  Sum_probs=45.9

Q ss_pred             EEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeeeec
Q psy3969           5 YKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCGV   83 (86)
Q Consensus         5 ~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yiGg   83 (86)
                      .+|+...|++      |.+++.+|+.+||+|+.+.|+- .+.+.+.+..+...          ..+||-+-.||..+.+
T Consensus         2 ~Ly~~~~s~~------~~~v~~~L~~~gi~~e~~~v~~-~~~~~~~~~~~~nP----------~g~vP~L~~~g~~l~e   63 (210)
T 1v2a_A            2 DYYYSLISPP------CQSAILLAKKLGITLNLKKTNV-HDPVERDALTKLNP----------QHTIPTLVDNGHVVWE   63 (210)
T ss_dssp             EEEECTTCHH------HHHHHHHHHHHTCCCEEEECCT-TCHHHHHHHHHHCT----------TCCSCEEEETTEEEES
T ss_pred             eEEeCCCCcc------HHHHHHHHHHcCCCcEEEECCc-ccchhhHHHHHhCC----------CCCcCeEEECCEEEEc
Confidence            5888888888      9999999999999999998862 23333455555443          3379999888876654

>3f6d_A Adgstd4-4, glutathione transferase GST1-4; HET: GTX; 1.70A {Anopheles dirus} PDB: 3f63_A* 1jlw_A* 3g7i_A* 3g7j_A*

Probab=96.56  E-value=0.0067  Score=40.67  Aligned_cols=62  Identities=8%  Similarity=-0.097  Sum_probs=45.2

Q ss_pred             EEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEe-CCeeee
Q psy3969           5 YKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFN-EEDYCG   82 (86)
Q Consensus         5 ~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFi-gd~yiG   82 (86)
                      .+|++..|++      |.++..+|+.+||+|+.+.|+-...+....+..+...          ..+||-+-. ||..+.
T Consensus         2 ~Ly~~~~s~~------~~~v~~~L~~~gi~ye~~~v~~~~~~~~~~~~~~~~P----------~g~vP~L~~~~g~~l~   64 (219)
T 3f6d_A            2 DFYYLPGSAP------CRAVQMTAAAVGVELNLKLTNLMAGEHMKPEFLKLNP----------QHCIPTLVDEDGFVLW   64 (219)
T ss_dssp             EEEECTTCHH------HHHHHHHHHHHTCCCEEEECCTTTTGGGSHHHHHHCT----------TCCSCEEECTTSCEEE
T ss_pred             EEEeCCCCCc------hHHHHHHHHHcCCCceEEEccCcccccCCHHHHhhCC----------CCccCeEEeCCCCEEE
Confidence            5899999988      9999999999999999998862122223345555443          337999987 766554

>3niv_A Glutathione S-transferase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.30A {Legionella pneumophila subsp}

Probab=96.54  E-value=0.0038  Score=42.08  Aligned_cols=64  Identities=17%  Similarity=0.098  Sum_probs=39.5

Q ss_pred             cEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCC--CHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeee
Q psy3969           4 PYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPG--KENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYC   81 (86)
Q Consensus         4 ~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~--d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yi   81 (86)
                      ..+|+...|++      |.+++.+|+.+||+|+.+.|+-..  .+....+..+..          +..+||-+..||..+
T Consensus         3 ~~Ly~~~~s~~------~~~v~~~L~~~gi~ye~~~v~~~~~~~~~~~~~~~~~~----------P~g~vP~L~~~g~~l   66 (222)
T 3niv_A            3 LILYDYFRSTA------CYRVRIALNLKKIAYEKIEVHLVNNGGEQHSLQYHQIN----------PQELVPSLDINGQIL   66 (222)
T ss_dssp             -CEEECTTCHH------HHHHHHHHHHTTCCCCEEECCC-----------------------------CCSEEEETTEEE
T ss_pred             EEEEcCCCCcH------HHHHHHHHHHcCCCcEEEEeccccccccccCHHHHhcC----------CCCCcCEEEECCEEe
Confidence            56888888888      999999999999999999887211  112233444433          234899999887766


Q ss_pred             ec
Q psy3969          82 GV   83 (86)
Q Consensus        82 Gg   83 (86)
                      ..
T Consensus        67 ~e   68 (222)
T 3niv_A           67 SQ   68 (222)
T ss_dssp             EC
T ss_pred             ec
Confidence            43

>2r4v_A XAP121, chloride intracellular channel protein 2; chloride intracellular channels, CLIC2, pore-forming protein ryanodine receptor, chloride channel; HET: GSH; 1.85A {Homo sapiens} PDB: 2r5g_A 2per_A*

Probab=96.54  E-value=0.0038  Score=43.47  Aligned_cols=63  Identities=17%  Similarity=0.159  Sum_probs=40.6

Q ss_pred             CCcEEE--------EEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCe
Q psy3969           2 KKPYKI--------SNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQ   73 (86)
Q Consensus         2 ~~~~~y--------~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQ   73 (86)
                      ..+.+|        ....|.+      |.+++.+|..+||+|+.+.|+  .. ....+..+..          +...||-
T Consensus        12 ~~i~ly~~~~~~~~~~~~sp~------~~rv~~~L~~~gi~ye~~~v~--~~-~~~~~~~~~n----------P~g~vP~   72 (247)
T 2r4v_A           12 PEIELFVKAGSDGESIGNCPF------CQRLFMILWLKGVKFNVTTVD--MT-RKPEELKDLA----------PGTNPPF   72 (247)
T ss_dssp             CCEEEEEEBCTTSSSBCSCHH------HHHHHHHHHHHTCCCEEEEEC--CC---------------------CCSSSCE
T ss_pred             CCEEEEEecCcccccCCCChh------HHHHHHHHHHcCCCcEEEEcC--cc-cchHHHHHhC----------CCCCCCE
Confidence            346788        4555665      999999999999999999997  22 1122333333          2348999


Q ss_pred             EEeCCeeeec
Q psy3969          74 IFNEEDYCGV   83 (86)
Q Consensus        74 IFigd~yiGg   83 (86)
                      +-.||..+..
T Consensus        73 L~~~g~~l~E   82 (247)
T 2r4v_A           73 LVYNKELKTD   82 (247)
T ss_dssp             EEETTEEECC
T ss_pred             EEECCEeccC
Confidence            9888877643

>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}

Probab=96.53  E-value=0.012  Score=41.62  Aligned_cols=55  Identities=7%  Similarity=-0.087  Sum_probs=41.4

Q ss_pred             cEEEEEcccCchhchHHHHHHHHHHHh----------CCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCe
Q psy3969           4 PYKISNTVRGVKGVKKRQQRVLMILDS----------KNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQ   73 (86)
Q Consensus         4 ~~~y~ss~sgn~~vK~~q~~a~~lL~~----------k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQ   73 (86)
                      +.+||++-|+.      |.++...|+.          .+|.+..||++  .+++..    ++.+  -+        .+|.
T Consensus       142 vv~F~a~wC~~------C~~~~p~l~~la~~~~~~~~~~v~~~~vd~~--~~~~~~----~~~~--V~--------~vPt  199 (243)
T 2hls_A          142 IETIITPSCPY------CPYAVLLAHMFAYEAWKQGNPVILSEAVEAY--ENPDIA----DKYG--VM--------SVPS  199 (243)
T ss_dssp             EEEEECSSCSS------HHHHHHHHHHHHHHHHHTTCCCEEEEEEETT--TCHHHH----HHTT--CC--------SSSE
T ss_pred             EEEEECCCCCC------cHHHHHHHHHHHHHcccccCCcEEEEEEECc--cCHHHH----HHcC--Ce--------eeCe
Confidence            35699999999      8888888765          57999999998  566533    3334  22        7999


Q ss_pred             EEeCCee
Q psy3969          74 IFNEEDY   80 (86)
Q Consensus        74 IFigd~y   80 (86)
                      ||++|+.
T Consensus       200 ~~i~G~~  206 (243)
T 2hls_A          200 IAINGYL  206 (243)
T ss_dssp             EEETTEE
T ss_pred             EEECCEE
Confidence            9998873

>3vln_A GSTO-1, glutathione S-transferase omega-1; GST fold, reductase; HET: ASC; 1.70A {Homo sapiens} PDB: 1eem_A* 3lfl_A*

Probab=96.48  E-value=0.0035  Score=42.91  Aligned_cols=61  Identities=21%  Similarity=0.217  Sum_probs=45.3

Q ss_pred             CcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEe-CCeee
Q psy3969           3 KPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFN-EEDYC   81 (86)
Q Consensus         3 ~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFi-gd~yi   81 (86)
                      ++.+|+...|++      |+++..+|+.+||+|+.+.|+-  .. ...++.+...          ...||-+-. ||..+
T Consensus        23 ~~~Ly~~~~sp~------~~~v~~~L~~~gi~ye~~~v~~--~~-~~~~~~~~~P----------~g~vP~L~~~~g~~l   83 (241)
T 3vln_A           23 SIRIYSMRFSPF------AERTRLVLKAKGIRHEVININL--KN-KPEWFFKKNP----------FGLVPVLENSQGQLI   83 (241)
T ss_dssp             CEEEEECTTCHH------HHHHHHHHHHHTCCEEEEEBCT--TS-CCTTHHHHCT----------TCCSCEEECTTCCEE
T ss_pred             eEEEEcCCCCcH------HHHHHHHHHHcCCCCeEEecCc--cc-CCHHHHHhCC----------CCCCCEEEECCCcEE
Confidence            578999988988      9999999999999999999972  21 1223444442          237999998 77655


Q ss_pred             e
Q psy3969          82 G   82 (86)
Q Consensus        82 G   82 (86)
                      .
T Consensus        84 ~   84 (241)
T 3vln_A           84 Y   84 (241)
T ss_dssp             E
T ss_pred             E
Confidence            4

>1gnw_A Glutathione S-transferase; herbicide detoxification; HET: GTX; 2.20A {Arabidopsis thaliana} SCOP: a.45.1.1 c.47.1.5 PDB: 1bx9_A*

Probab=96.41  E-value=0.0036  Score=41.54  Aligned_cols=64  Identities=17%  Similarity=0.167  Sum_probs=44.4

Q ss_pred             cEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeeeec
Q psy3969           4 PYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCGV   83 (86)
Q Consensus         4 ~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yiGg   83 (86)
                      ..+|++..|++      |.+++.+|+.+||+|+.+.|+-...+....+..+..          +...||-+-.||..+.+
T Consensus         3 ~~Ly~~~~sp~------~~~v~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~~~----------P~g~vP~L~~~g~~l~e   66 (211)
T 1gnw_A            3 IKVFGHPASIA------TRRVLIALHEKNLDFELVHVELKDGEHKKEPFLSRN----------PFGQVPAFEDGDLKLFE   66 (211)
T ss_dssp             EEEEECTTCHH------HHHHHHHHHHTTCCCEEEECCGGGTGGGSTTGGGTC----------TTCCSCEEEETTEEEEC
T ss_pred             eEEEeCCCCcc------hHHHHHHHHhcCCCcEEEEeccccccccCHHHHHhC----------CCCCCCEEEECCEEEeC
Confidence            57888888888      999999999999999999886111111122233322          34489999888876643

>1oe8_A Glutathione S-transferase; schistosomiasis, detoxifying enzyme, prostaglandin D2 synthase, vaccine candidate; HET: GSH; 1.65A {Schistosoma haematobium} SCOP: a.45.1.1 c.47.1.5 PDB: 1oe7_A* 2c80_A* 2ca8_A* 2f8f_A* 2c8u_A 2caq_A* 2cai_A* 1u3i_A*

Probab=96.41  E-value=0.0056  Score=40.84  Aligned_cols=58  Identities=14%  Similarity=0.079  Sum_probs=42.2

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCC
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEE   78 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd   78 (86)
                      |.++.+|+...|++      |.+++.+|+.+||+|+.+.|+  ..  ...++....          +...||-+-.||
T Consensus         3 m~~~~Ly~~~~s~~------~~~v~~~L~~~gi~~e~~~v~--~~--~~~~~~~~~----------P~g~vP~L~~~~   60 (211)
T 1oe8_A            3 GDHIKVIYFNGRGR------AESIRMTLVAAGVNYEDERIS--FQ--DWPKIKPTI----------PGGRLPAVKITD   60 (211)
T ss_dssp             -CEEEEEESCTTST------THHHHHHHHHTTCCCEEEECC--TT--THHHHGGGS----------TTSCSCEEEEEC
T ss_pred             CCceEEEEeCCCCh------HHHHHHHHHHcCCCceEEEec--hH--hHHHhcccC----------CCCCCCEEEECC
Confidence            34678999989999      899999999999999999997  21  123333322          334899887654

>4hz4_A Glutathione-S-transferase; enzyme function initiative; 1.62A {Actinobacillus pleuropneumoniae}

Probab=96.39  E-value=0.0091  Score=40.15  Aligned_cols=66  Identities=11%  Similarity=0.062  Sum_probs=44.0

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCH-hHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCe
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKE-NEKEFMQQNSKATPSDSTVKSNPLPPQIFNEED   79 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~-~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~   79 (86)
                      |..+.+|++. +++      +.+++.+|+.+||+|+.+.|+-...+ ....+..+..          +..+||-+-.||.
T Consensus         1 M~~~~Ly~~~-~~~------~~~v~~~L~~~gi~ye~~~v~~~~~~~~~~~~~~~~n----------P~g~vP~L~~~g~   63 (217)
T 4hz4_A            1 MVMITLHYLK-QSC------SHRIVWLLEALGLDYELKIYDRLEGTGFAPEELKAQH----------PLGKAPVLQDGDL   63 (217)
T ss_dssp             --CEEEEEES-SST------THHHHHHHHHHTCCCEEEEECCCTTTCCCCHHHHTTS----------TTCCSCEEEETTE
T ss_pred             CceEEEeecC-CCc------HHHHHHHHHHcCCCceEEEEecCcccccCCHHHHhcC----------CCCCCCEEEECCE
Confidence            7778889876 346      89999999999999999988621111 1233444433          2347999988887


Q ss_pred             eeec
Q psy3969          80 YCGV   83 (86)
Q Consensus        80 yiGg   83 (86)
                      .+.+
T Consensus        64 ~l~e   67 (217)
T 4hz4_A           64 VLAE   67 (217)
T ss_dssp             EEEC
T ss_pred             eeec
Confidence            6643

>4ecj_A Glutathione S-transferase; transferase-like protein, transcription regulation; HET: GSH; 1.76A {Pseudomonas aeruginosa} PDB: 4eci_A*

Probab=96.32  E-value=0.0039  Score=43.25  Aligned_cols=61  Identities=16%  Similarity=0.165  Sum_probs=42.4

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCC
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEE   78 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd   78 (86)
                      |..+.+|+.. |++      |.+++.+|+.+||+|+.+.|+-...+....+..+..          +..+||-+-.+|
T Consensus         1 M~m~~Ly~~~-sp~------~~~vr~~L~~~gi~ye~~~v~~~~~~~~~~~~~~~n----------P~g~vPvL~~~d   61 (244)
T 4ecj_A            1 MVMIDLYTAA-TPN------GHKVSIALEEMGLPYRVHALSFDKKEQKAPEFLRIN----------PNGRIPAIVDRD   61 (244)
T ss_dssp             -CCEEEEECS-SHH------HHHHHHHHHHHTCCEEEEECCGGGTGGGSHHHHTTC----------TTCCSCEEEEGG
T ss_pred             CcEEEEecCC-CcC------HHHHHHHHHHcCCCceEEEecCCCCCcCCHHHHhcC----------CCCCCCEEEECC
Confidence            6777888875 766      999999999999999999886211122234444433          334899998764

>2gsq_A Squid GST, glutathione S-transferase; squid digestive gland, sigma class; HET: GBI; 2.20A {Ommastrephes sloani} SCOP: a.45.1.1 c.47.1.5 PDB: 1gsq_A*

Probab=96.32  E-value=0.009  Score=39.64  Aligned_cols=61  Identities=8%  Similarity=-0.038  Sum_probs=45.4

Q ss_pred             CcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeeee
Q psy3969           3 KPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCG   82 (86)
Q Consensus         3 ~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yiG   82 (86)
                      +..+|+...|++      |.+++.+|..+||+|+.+.|+  .  +...+..+..          +...||-+-.||..+.
T Consensus         2 ~~~Ly~~~~s~~------~~~v~~~L~~~gi~~e~~~v~--~--~~~~~~~~~~----------P~g~vP~L~~~g~~l~   61 (202)
T 2gsq_A            2 KYTLHYFPLMGR------AELCRFVLAAHGEEFTDRVVE--M--ADWPNLKATM----------YSNAMPVLDIDGTKMS   61 (202)
T ss_dssp             CEEEEECSSSGG------GHHHHHHHHHTTCCCEEEECC--T--TTHHHHGGGS----------GGGSSCEEEETTEEEC
T ss_pred             CcEEEEcCCCch------hHHHHHHHHHcCCCeeEEEeC--H--HHHHhhcccC----------CCCCCCEEEECCEEEe
Confidence            457888888888      999999999999999999997  3  2234444433          2337999888877664


Q ss_pred             c
Q psy3969          83 V   83 (86)
Q Consensus        83 g   83 (86)
                      +
T Consensus        62 e   62 (202)
T 2gsq_A           62 Q   62 (202)
T ss_dssp             C
T ss_pred             c
Confidence            3

>4ikh_A Glutathione S-transferase; enzyme function initiative, EFI, structural genomics; HET: GSH; 2.10A {Pseudomonas protegens}

Probab=96.26  E-value=0.0073  Score=41.34  Aligned_cols=61  Identities=13%  Similarity=0.077  Sum_probs=42.7

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCC
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEE   78 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd   78 (86)
                      |.++.+|+.. |++      |.+++.+|..+||+|+.+.|+-...+....+..+...          ...||-+-.++
T Consensus        20 ~~~~~Ly~~~-~~~------~~~v~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~~nP----------~g~vP~L~~~d   80 (244)
T 4ikh_A           20 PEWIQLYSLP-TPN------GVKVSIMLEEIGLPYEAHRVSFETQDQMTPEFLSVSP----------NNKIPAILDPH   80 (244)
T ss_dssp             TTSEEEEECS-SHH------HHHHHHHHHHHTCCEEEEECCTTTTTTSSHHHHTTCT----------TSCSCEEEETT
T ss_pred             CCeeEEEeCC-CCC------hHHHHHHHHHcCCCceEEEecCCCCCcCChHHHhcCC----------CCCCCEEEecC
Confidence            3467888877 766      9999999999999999988862122223344554442          34799998753

>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}

Probab=96.25  E-value=0.0049  Score=46.16  Aligned_cols=66  Identities=5%  Similarity=-0.146  Sum_probs=47.8

Q ss_pred             CcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCH-hHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeee
Q psy3969           3 KPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKE-NEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYC   81 (86)
Q Consensus         3 ~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~-~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yi   81 (86)
                      ++..|++.=|+.      |++++.+|++..-++..+|++. .|. +...++.++.+  -+        .+|.+|++|+..
T Consensus       200 ~vV~F~A~WC~~------Ck~l~p~le~lA~~l~~Vd~d~-~d~~~~~~~la~~~g--I~--------~vPT~~i~G~~~  262 (291)
T 3kp9_A          200 GGTMYGAYWCPH------CQDQKELFGAAFDQVPYVECSP-NGPGTPQAQECTEAG--IT--------SYPTWIINGRTY  262 (291)
T ss_dssp             TCEEEECTTCHH------HHHHHHHHGGGGGGSCEEESCS-SCSSSCCCHHHHTTT--CC--------STTEEEETTEEE
T ss_pred             CEEEEECCCCHH------HHHHHHHHHHHHHHcCEEEEee-cCchhhHHHHHHHcC--Cc--------ccCeEEECCEEe
Confidence            467899999988      9999999998765666777762 122 32344555555  33        799999999988


Q ss_pred             eccC
Q psy3969          82 GVFR   85 (86)
Q Consensus        82 Ggyd   85 (86)
                      .|+.
T Consensus       263 ~G~~  266 (291)
T 3kp9_A          263 TGVR  266 (291)
T ss_dssp             ESCC
T ss_pred             cCCC
Confidence            7764

>3rbt_A Glutathione transferase O1; glutathione S-transferase omega3; 2.20A {Bombyx mori}

Probab=96.24  E-value=0.0072  Score=41.82  Aligned_cols=58  Identities=19%  Similarity=0.252  Sum_probs=43.8

Q ss_pred             CcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEe-CCe
Q psy3969           3 KPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFN-EED   79 (86)
Q Consensus         3 ~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFi-gd~   79 (86)
                      ++.+|+...|++      |.+++.+|+.+||+|+.+.|+  ... ...+..+...          ...||-+-. ||.
T Consensus        26 ~~~Ly~~~~sp~------~~~v~~~L~~~gi~ye~~~v~--~~~-~~~~~~~~nP----------~g~vP~L~~~~g~   84 (246)
T 3rbt_A           26 KLRLYHVDMNPY------GHRVLLVLEAKRIKYEVYRLD--PLR-LPEWFRAKNP----------RLKIPVLEIPTDQ   84 (246)
T ss_dssp             SEEEEECTTCHH------HHHHHHHHHHTTBCEEEEECC--SSS-CCHHHHHHCT----------TCBSCEEEECCTT
T ss_pred             ceEEEecCCCcc------HHHHHHHHHHcCCCceEEEeC--ccc-CCHHHHHhCC----------CCCCCEEEecCCC
Confidence            567899888988      999999999999999999987  221 2233455443          237999998 665

>2c4j_A Glutathione S-transferase MU 2; glutathione transferase, multigene family; HET: GSO; 1.35A {Homo sapiens} SCOP: a.45.1.1 c.47.1.5 PDB: 1xw5_A* 1ykc_A* 2ab6_A* 2gtu_A 3gtu_A 3gur_A* 1hna_A* 1hnb_A* 1hnc_A* 1xw6_A* 1xwk_A* 1yj6_A* 2f3m_A* 2dc5_A 1gtu_A 4gtu_A 6gsu_A* 6gsv_A* 6gsw_A* 2gst_A* ...

Probab=96.14  E-value=0.018  Score=38.70  Aligned_cols=70  Identities=13%  Similarity=0.172  Sum_probs=45.1

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHh-HH-HHHHHhcCCCCCCCCCCCCCCCCeEEeCC
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKEN-EK-EFMQQNSKATPSDSTVKSNPLPPQIFNEE   78 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~-~r-~~M~~~~g~~~~~~~~~~~~tvPQIFigd   78 (86)
                      |. +.+|+...|++      |.+++.+|..+||+|+.+.|+-...++ .+ +++.+...   .   +.+...||-+-.||
T Consensus         1 M~-~~Ly~~~~s~~------~~~v~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~~~~~~---~---g~P~g~vP~L~d~~   67 (218)
T 2c4j_A            1 MP-MTLGYWNIRGL------AHSIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLNEKFK---L---GLDFPNLPYLIDGT   67 (218)
T ss_dssp             -C-EEEEEESSSGG------GHHHHHHHHHTTCCEEEEEECCCCTTTTCCHHHHTTTTS---S---CCSSCCSSEEEETT
T ss_pred             CC-cEEEEeCCCch------hHHHHHHHHHcCCCceEEEeecCcccccchhHHhhhccc---c---CCCCCCCCEEEECC
Confidence            55 67899888998      999999999999999999886211111 12 23332221   0   01234799987777


Q ss_pred             eeeec
Q psy3969          79 DYCGV   83 (86)
Q Consensus        79 ~yiGg   83 (86)
                      ..+..
T Consensus        68 ~~l~e   72 (218)
T 2c4j_A           68 HKITQ   72 (218)
T ss_dssp             EEEES
T ss_pred             eEeee
Confidence            65543

>2ycd_A Glutathione S-transferase; SOIL bacteria, herbicide detoxification; HET: GTB; 1.40A {Agrobacterium tumefaciens} PDB: 3lq7_A

Probab=96.10  E-value=0.0029  Score=43.19  Aligned_cols=63  Identities=8%  Similarity=-0.094  Sum_probs=44.2

Q ss_pred             CcEEEEEccc-----CchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeC
Q psy3969           3 KPYKISNTVR-----GVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNE   77 (86)
Q Consensus         3 ~~~~y~ss~s-----gn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFig   77 (86)
                      ++.+|+.-.|     ++      |.+++.+|..+||+|+.+.|+  .......+..+.          ++...||-+-.|
T Consensus        18 ~~~Ly~~~~s~~~~~~~------~~~v~~~L~~~gi~~e~~~v~--~~~~~~~~~~~~----------nP~g~vP~L~~~   79 (230)
T 2ycd_A           18 TITVFERSPDGGRGLAR------DMPVRWALEEVGQPYHVRRLS--FEAMKEASHLAY----------QPFGQIPSYEQG   79 (230)
T ss_dssp             EEEEESSCTTTTSSCST------HHHHHHHHHHHTCCCEEEEEC--HHHHTSTTGGGT----------CTTSCSCEEEET
T ss_pred             eEEEecCCCccccCCCc------cHHHHHHHHHcCCCceEEEeC--ccccCCHHHHhc----------CCCCCCCEEEEC
Confidence            5788888887     77      999999999999999999986  211111122222          234589999888


Q ss_pred             Ceeeec
Q psy3969          78 EDYCGV   83 (86)
Q Consensus        78 d~yiGg   83 (86)
                      |..+.+
T Consensus        80 g~~l~e   85 (230)
T 2ycd_A           80 DLILFE   85 (230)
T ss_dssp             TEEEEC
T ss_pred             CEEEEc
Confidence            776654

>1k0m_A CLIC1, NCC27, chloride intracellular channel protein 1; glutathione-S-tranferase superfamily, chloride ION channel, metal transport; 1.40A {Homo sapiens} SCOP: a.45.1.1 c.47.1.5 PDB: 1k0n_A* 1k0o_A 1rk4_A 3uvh_A 3o3t_A 3p90_A 3qr6_A 3p8w_A 3tgz_A 3ma4_A 3swl_A

Probab=96.05  E-value=0.018  Score=39.96  Aligned_cols=62  Identities=16%  Similarity=0.166  Sum_probs=43.2

Q ss_pred             CCcEEEEEc--------ccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCe
Q psy3969           2 KKPYKISNT--------VRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQ   73 (86)
Q Consensus         2 ~~~~~y~ss--------~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQ   73 (86)
                      ....+|+..        .|.+      |++++.+|..+||+|+.+.|+  .. ....++.+...          ..+||-
T Consensus         6 ~~~~Ly~~~~~~g~~~~~sp~------~~rv~~~L~~~gi~ye~~~v~--~~-~~~~~~~~~nP----------~g~VPv   66 (241)
T 1k0m_A            6 PQVELFVKAGSDGAKIGNCPF------SQRLFMVLWLKGVTFNVTTVD--TK-RRTETVQKLCP----------GGELPF   66 (241)
T ss_dssp             CCEEEEEEBCTTSSSBCSCHH------HHHHHHHHHHHTCCCEEEEEC--TT-SCCHHHHHHCT----------TCCSSE
T ss_pred             CceEEEeecCCCCCCCCCCHH------HHHHHHHHHHcCCccEEEEcC--Cc-ccHHHHHHhCC----------CCCCCE
Confidence            356788765        3444      999999999999999999886  22 22334444442          237999


Q ss_pred             EEeCCeeee
Q psy3969          74 IFNEEDYCG   82 (86)
Q Consensus        74 IFigd~yiG   82 (86)
                      +-.||..+.
T Consensus        67 L~~~g~~l~   75 (241)
T 1k0m_A           67 LLYGTEVHT   75 (241)
T ss_dssp             EEETTEEEE
T ss_pred             EEECCEEec
Confidence            988776654

>4glt_A Glutathione S-transferase-like protein; structural genomics, function initiative, EFI; HET: GSH; 2.20A {Methylobacillus flagellatus}

Probab=96.02  E-value=0.0022  Score=43.98  Aligned_cols=58  Identities=9%  Similarity=0.065  Sum_probs=41.7

Q ss_pred             EEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeC-Ceee
Q psy3969           5 YKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNE-EDYC   81 (86)
Q Consensus         5 ~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFig-d~yi   81 (86)
                      .+|++..|.+      |+|++.+|..+||+|+.+.|+- .+.+  .+..+..          +..+||-+-.+ |..+
T Consensus        24 KLy~~~~SP~------~~rVr~~L~e~gi~~e~~~v~~-~~~~--~~~~~~n----------P~gkVPvL~~~dG~~l   82 (225)
T 4glt_A           24 KLLYSNTSPY------ARKVRVVAAEKRIDVDMVLVVL-ADPE--CPVADHN----------PLGKIPVLILPDGESL   82 (225)
T ss_dssp             EEEECSSCHH------HHHHHHHHHHHTCCCEEEECCT-TCSS--SCGGGTC----------TTCCSCEEECTTSCEE
T ss_pred             eEecCCCCHH------HHHHHHHHHHhCCCCEEEEeCC-CCCC--HHHHHhC----------CCCCCCEEEeCCCCEE
Confidence            5899999999      9999999999999999998862 2222  1233332          34489988764 4554

>4gf0_A Glutathione S-transferase; GST, enzyme function initiative, EFI, structural genomics; HET: GSH; 1.75A {Sulfitobacter}

Probab=95.96  E-value=0.017  Score=38.80  Aligned_cols=64  Identities=11%  Similarity=0.060  Sum_probs=42.9

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeC-Ce
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNE-ED   79 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFig-d~   79 (86)
                      |.-..+|++- +++      ..++.-+|+.+||+|+.+.|+-...+....+..+..          +...||-+-.+ |.
T Consensus         1 M~m~kLY~~p-~s~------s~~vr~~L~e~gl~ye~~~v~~~~~~~~~~~~l~~n----------P~g~vP~L~~d~g~   63 (215)
T 4gf0_A            1 MVMLTLYFTP-GTI------SVAVAIAIEEAALPYQPVRVDFATAEQTKPDYLAIN----------PKGRVPALRLEDDT   63 (215)
T ss_dssp             CCSEEEEECT-TST------HHHHHHHHHHTTCCEEEEECCGGGTGGGSHHHHTTC----------TTCCSCEEECTTSC
T ss_pred             CCcEEEEeCC-CCc------HHHHHHHHHHhCCCCEEEEECCCCCccCCHHHHHhC----------CCCCcceEEecCCc
Confidence            7778899865 344      678999999999999998875212233334555443          33479999765 44


Q ss_pred             ee
Q psy3969          80 YC   81 (86)
Q Consensus        80 yi   81 (86)
                      .+
T Consensus        64 ~l   65 (215)
T 4gf0_A           64 IL   65 (215)
T ss_dssp             EE
T ss_pred             EE
Confidence            44

>4dej_A Glutathione S-transferase related protein; transferase-like protein, transcription regulation; 2.90A {Idiomarina loihiensis}

Probab=95.93  E-value=0.016  Score=39.96  Aligned_cols=61  Identities=15%  Similarity=0.074  Sum_probs=45.2

Q ss_pred             cEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCC-CCCCeEEeCCeeee
Q psy3969           4 PYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSN-PLPPQIFNEEDYCG   82 (86)
Q Consensus         4 ~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~-~tvPQIFigd~yiG   82 (86)
                      +.+|+...|++      |.+++.+|..+||+|+.+.|+  .. ....+..+...          . ..||-+-.||..+.
T Consensus        13 ~~Ly~~~~sp~------~~~vr~~L~~~gi~~e~~~v~--~~-~~~~~~~~~nP----------~~g~vPvL~~~g~~l~   73 (231)
T 4dej_A           13 MTLYSGKDDLK------SHQVRLVLAEKGVGVEITYVT--DE-STPEDLLQLNP----------YPEAKPTLVDRELVLY   73 (231)
T ss_dssp             CEEEECSSCHH------HHHHHHHHHHHTCBCEEEECC--SS-CCCHHHHHHCC----------SSSCCSEEEETTEEEE
T ss_pred             EEEEcCCCChH------HHHHHHHHHHcCCCcEEEEcC--cc-cCCHHHHHhCC----------CCCCCCEEEECCEEEE
Confidence            57898888888      999999999999999999997  22 22233444432          3 37999998887664


Q ss_pred             c
Q psy3969          83 V   83 (86)
Q Consensus        83 g   83 (86)
                      +
T Consensus        74 e   74 (231)
T 4dej_A           74 N   74 (231)
T ss_dssp             S
T ss_pred             c
Confidence            3

>2c3n_A Glutathione S-transferase theta 1; glutathione transferase, polymorphism; 1.5A {Homo sapiens} PDB: 2c3q_A* 2c3t_A

Probab=95.92  E-value=0.022  Score=39.44  Aligned_cols=64  Identities=6%  Similarity=-0.033  Sum_probs=46.0

Q ss_pred             CcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeeee
Q psy3969           3 KPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCG   82 (86)
Q Consensus         3 ~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yiG   82 (86)
                      .+.+|....|.+      |.++..+|..+||+|+.+.|+-...+....+..+...          ...||-+-.||..+.
T Consensus         9 ~~~ly~~~~sp~------~rkv~~~L~e~gi~ye~~~v~~~~~~~~~~~~~~~nP----------~gkVPvL~d~g~~l~   72 (247)
T 2c3n_A            9 GLELYLDLLSQP------CRAVYIFAKKNDIPFELRIVDLIKGQHLSDAFAQVNP----------LKKVPALKDGDFTLT   72 (247)
T ss_dssp             CEEEEECTTSHH------HHHHHHHHHHTTCCCEEEECCGGGTGGGSHHHHHHCT----------TCCSCEEEETTEEEE
T ss_pred             ceEEeecCCChh------HHHHHHHHHHcCCCceEEEeccccCCcCCHHHHhhCC----------CCcCcEEEECCEEEE
Confidence            578999999999      9999999999999999988861111122334444442          237999987776654

>1tu7_A Glutathione S-transferase 2; HET: GSH; 1.50A {Onchocerca volvulus} SCOP: a.45.1.1 c.47.1.5 PDB: 1tu8_A*

Probab=95.91  E-value=0.015  Score=38.84  Aligned_cols=60  Identities=10%  Similarity=0.135  Sum_probs=43.8

Q ss_pred             CcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeeee
Q psy3969           3 KPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCG   82 (86)
Q Consensus         3 ~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yiG   82 (86)
                      ++.+|+...|++      |.+++.+|+.+||+|+.+.|+  ...  ..+..+..          +...||-+-.||..+.
T Consensus         2 ~~~Ly~~~~s~~------~~~v~~~L~~~gi~~e~~~v~--~~~--~~~~~~~n----------P~g~vP~L~~~g~~l~   61 (208)
T 1tu7_A            2 SYKLTYFSIRGL------AEPIRLFLVDQDIKFIDDRIA--KDD--FSSIKSQF----------QFGQLPCLYDGDQQIV   61 (208)
T ss_dssp             CEEEEEESSSGG------GHHHHHHHHHTTCCCEEEEEC--GGG--STTTGGGS----------TTSCSCEEEETTEEEE
T ss_pred             CcEEEEcCCCcc------hHHHHHHHHHcCCCceEEEEc--HHH--HHHhccCC----------CCCCCCEEEECCEEEE
Confidence            467899998998      999999999999999999886  211  11222222          3447999888876654

>3q18_A GSTO-2, glutathione S-transferase omega-2; glutathione transferase, dehydroascorbate reductase, reductase; 1.70A {Homo sapiens} PDB: 3q19_A* 3qag_A*

Probab=95.90  E-value=0.007  Score=41.42  Aligned_cols=61  Identities=15%  Similarity=0.118  Sum_probs=43.9

Q ss_pred             CcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEe-CCeee
Q psy3969           3 KPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFN-EEDYC   81 (86)
Q Consensus         3 ~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFi-gd~yi   81 (86)
                      ++.+|+...|++      |.+++.+|+.+||+|+.+.|+  ... ...+..+..          +..+||-+-. ||..+
T Consensus        23 ~~~Ly~~~~sp~------~~~v~~~L~~~gi~~e~~~v~--~~~-~~~~~~~~n----------P~g~vP~L~~~~g~~l   83 (239)
T 3q18_A           23 LIRIYSMRFCPY------SHRTRLVLKAKDIRHEVVNIN--LRN-KPEWYYTKH----------PFGHIPVLETSQSQLI   83 (239)
T ss_dssp             CEEEEECTTCHH------HHHHHHHHHHTTCCEEEEEBC--SSS-CCGGGGGTS----------TTCCSCEEECTTCCEE
T ss_pred             eEEEEeCCCChH------HHHHHHHHHHcCCCcEEEecC--ccc-CCHHHHhcC----------CCCCCCEEEeCCCcee
Confidence            467888888888      999999999999999999986  221 111222322          3448999988 76655


Q ss_pred             e
Q psy3969          82 G   82 (86)
Q Consensus        82 G   82 (86)
                      .
T Consensus        84 ~   84 (239)
T 3q18_A           84 Y   84 (239)
T ss_dssp             C
T ss_pred             e
Confidence            3

>2fhe_A GST, glutathione S-transferase; transferase-substrate complex; HET: GSH; 2.30A {Fasciola hepatica} SCOP: a.45.1.1 c.47.1.5 PDB: 2wrt_A 1fhe_A*

Probab=95.89  E-value=0.044  Score=36.79  Aligned_cols=65  Identities=14%  Similarity=0.120  Sum_probs=43.0

Q ss_pred             CcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeeee
Q psy3969           3 KPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCG   82 (86)
Q Consensus         3 ~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yiG   82 (86)
                      ++.+||...|++      |++++.+|..+||+|+.+.|+  .. ..-++......  -.    .+...||-+-.||..+.
T Consensus         1 ~~~L~y~~~~~~------~~~v~~~L~~~gi~ye~~~v~--~~-~~~~~~~~~~~--~~----~P~g~vP~L~d~g~~l~   65 (216)
T 2fhe_A            1 PAKLGYWKIRGL------QQPVRLLLEYLGEKYEEQIYE--RD-DGEKWFSKKFE--LG----LDLPNLPYYIDDKCKLT   65 (216)
T ss_dssp             CEEEEEESSSTT------THHHHHHHHHTTCCEEEEEEC--TT-CHHHHHHHTTT--SC----CSSCCSSEEECSSCEEE
T ss_pred             CcEEEEcCCCch------hHHHHHHHHHcCCCceEEeeC--CC-chhhhhccccc--cC----CCCCCCCEEEECCEEEE
Confidence            467888888998      999999999999999999997  22 11122222211  00    03447998876665543

>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}

Probab=95.79  E-value=0.014  Score=36.43  Aligned_cols=63  Identities=3%  Similarity=-0.179  Sum_probs=45.1

Q ss_pred             cEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHh--HHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeee
Q psy3969           4 PYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKEN--EKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYC   81 (86)
Q Consensus         4 ~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~--~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yi   81 (86)
                      +..||++-|+.      |.+...+|+...-+|..||++  .+..  ...++.++.+  -+        .+|.+|++|+..
T Consensus        16 vV~F~A~WC~~------C~~~~p~~~~~a~~~~~v~~~--~~~~~~~~~~l~~~~~--V~--------~~PT~~i~G~~~   77 (106)
T 3kp8_A           16 GTMYGAYWCPH------CQDQKELFGAAFDQVPYVECS--PNGPGTPQAQECTEAG--IT--------SYPTWIINGRTY   77 (106)
T ss_dssp             CEEEECTTCHH------HHHHHHHHGGGGGGSCEEESC--TTCTTSCCCHHHHHTT--CC--------SSSEEEETTEEE
T ss_pred             EEEEECCCCHH------HHHHHHHHHHHHHhCCEEEEe--cccccchhHHHHHHcC--Ce--------EeCEEEECCEEe
Confidence            56799999998      999999999887778888887  2221  2233445555  23        689999988765


Q ss_pred             ecc
Q psy3969          82 GVF   84 (86)
Q Consensus        82 Ggy   84 (86)
                      .|.
T Consensus        78 ~G~   80 (106)
T 3kp8_A           78 TGV   80 (106)
T ss_dssp             ESC
T ss_pred             cCC
Confidence            553

>3r2q_A Uncharacterized GST-like protein YIBF; transferase, glutathione; HET: GSH; 1.05A {Escherichia coli}

Probab=95.78  E-value=0.005  Score=40.57  Aligned_cols=59  Identities=14%  Similarity=0.104  Sum_probs=42.3

Q ss_pred             EEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEE-eCCeeee
Q psy3969           5 YKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIF-NEEDYCG   82 (86)
Q Consensus         5 ~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIF-igd~yiG   82 (86)
                      .+|++..|++      |.+++.+|+.+||+|+.+.|+  .. ....+..+.          ++..+||-+- .||..+.
T Consensus         2 ~Ly~~~~sp~------~~~v~~~l~~~gi~~e~~~v~--~~-~~~~~~~~~----------~P~g~vP~L~~~~g~~l~   61 (202)
T 3r2q_A            2 KLVGSYTSPF------VRKLSILLLEKGITFEFINEL--PY-NADNGVAQF----------NPLGKVPVLVTEEGECWF   61 (202)
T ss_dssp             EEEECSSCHH------HHHHHHHHHHTTCCCEEEECC--TT-SSSCSCTTT----------CTTCCSCEEECTTSCEEC
T ss_pred             EEEeCCCCcH------HHHHHHHHHHcCCCCeEEEec--CC-CCcHHHHHh----------CCCCCcCeEEecCCcEEe
Confidence            5888888988      999999999999999999987  22 111112222          3455899998 5766554

>1dug_A Chimera of glutathione S-transferase-synthetic linker-C-terminal fibrinogen gamma...; gamma chain integrin fragment; HET: GSH; 1.80A {Schistosoma japonicum} SCOP: a.45.1.1 c.47.1.5 PDB: 1gne_A* 3qmz_T 1y6e_A 1m9a_A* 1gtb_A* 1gta_A* 1m99_A* 1m9b_A* 1ua5_A* 1u87_A* 1u88_A* 3crt_A* 3cru_A* 3d0z_A*

Probab=95.75  E-value=0.039  Score=37.89  Aligned_cols=65  Identities=11%  Similarity=0.083  Sum_probs=43.8

Q ss_pred             CcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeeee
Q psy3969           3 KPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCG   82 (86)
Q Consensus         3 ~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yiG   82 (86)
                      |+.+||...|++      |.+++.+|..+||+|+.+.|+  .. ..-++......  -.    .+...||-+-.||..+.
T Consensus         1 ~~~L~y~~~s~~------~~~vr~~L~~~gi~ye~~~v~--~~-~~~~~~~~~~~--~~----~P~g~vP~L~d~g~~l~   65 (234)
T 1dug_A            1 SPILGYWKIKGL------VQPTRLLLEYLEEKYEEHLYE--RD-EGDKWRNKKFE--LG----LEFPNLPYYIDGDVKLT   65 (234)
T ss_dssp             CCEEEEESSSGG------GHHHHHHHHHHTCCCEEEEEC--TT-CHHHHHHHTTS--SC----CSSCCSSEEECSSCEEE
T ss_pred             CcEEEEcCCCCc------hHHHHHHHHHcCCCceEEEeC--CC-chhhHhhhccc--cC----CCCCCCCEEEECCEEEe
Confidence            578999999998      999999999999999999997  22 11122322211  00    13447998876665553

>3gx0_A GST-like protein YFCG; transferase, glutathione, glutathione disulfide, disulfide bond oxidoreductase; HET: GDS; 2.30A {Escherichia coli}

Probab=95.70  E-value=0.03  Score=37.28  Aligned_cols=57  Identities=14%  Similarity=0.157  Sum_probs=40.0

Q ss_pred             cEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeC
Q psy3969           4 PYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNE   77 (86)
Q Consensus         4 ~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFig   77 (86)
                      ..+|+.. |++      |.+++.+|..+||+|+.+.|+-...+....+..+..          +..+||-+-.+
T Consensus         2 ~~Ly~~~-s~~------~~~v~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~~~----------P~g~vP~L~~~   58 (215)
T 3gx0_A            2 IDLYFAP-TPN------GHKITLFLEEAELDYRLIKVDLGKGGQFRPEFLRIS----------PNNKIPAIVDH   58 (215)
T ss_dssp             EEEEECS-SHH------HHHHHHHHHHHTCCEEEEECCTTTTGGGSHHHHTTC----------TTSCSCEEEES
T ss_pred             eEEEeCC-CCC------hHHHHHHHHHcCCCcEEEecCCCCCCCCChHHHHhC----------CCCCCCEEEeC
Confidence            3567665 766      999999999999999999886322222344444433          23479999887

>1gwc_A Glutathione S-transferase TSI-1; herbicide detoxification, plant, TAU class; HET: GTX; 2.25A {Aegilops tauschii} SCOP: a.45.1.1 c.47.1.5

Probab=95.67  E-value=0.025  Score=38.20  Aligned_cols=63  Identities=11%  Similarity=0.086  Sum_probs=44.0

Q ss_pred             CcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeeee
Q psy3969           3 KPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCG   82 (86)
Q Consensus         3 ~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yiG   82 (86)
                      .+.+|+...|++      |.+++.+|+.+||+|+.+.|+  .. ....+..+...  .       ...||-+-.||..+.
T Consensus         6 ~~~Ly~~~~sp~------~~~v~~~L~~~gi~~e~~~v~--~~-~~~~~~~~~nP--~-------~g~vP~L~~~g~~l~   67 (230)
T 1gwc_A            6 DLKLLGAWPSPF------VTRVKLALALKGLSYEDVEED--LY-KKSELLLKSNP--V-------HKKIPVLIHNGAPVC   67 (230)
T ss_dssp             CEEEEECTTCHH------HHHHHHHHHHHTCCCEEEECC--TT-SCCHHHHHHST--T-------TCCSCEEEETTEEEE
T ss_pred             cEEEEeCCCChH------HHHHHHHHHHcCCCCeEEecc--cc-cCCHHHHhhCC--C-------CCccCEEEECCEEee
Confidence            467888888887      999999999999999999886  21 11122333322  0       137999988877654


Q ss_pred             c
Q psy3969          83 V   83 (86)
Q Consensus        83 g   83 (86)
                      +
T Consensus        68 e   68 (230)
T 1gwc_A           68 E   68 (230)
T ss_dssp             S
T ss_pred             c
Confidence            3

>1gsu_A GST, CGSTM1-1, class-MU glutathione S-transferase; detoxification enzyme, S-hexyl glutathione; HET: GTX; 1.94A {Gallus gallus} SCOP: a.45.1.1 c.47.1.5 PDB: 1c72_A*

Probab=95.57  E-value=0.051  Score=36.63  Aligned_cols=68  Identities=10%  Similarity=0.119  Sum_probs=44.6

Q ss_pred             cEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCH--hHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeee
Q psy3969           4 PYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKE--NEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYC   81 (86)
Q Consensus         4 ~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~--~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yi   81 (86)
                      +.+|+...|++      |.+++.+|+.+||+|+.+.|+-...+  ...++..+.... .     .+...||-+-.||..+
T Consensus         2 ~~L~~~~~~~~------~~~v~~~L~~~gi~ye~~~v~~~~~~~~~~~~~~~~~~~~-~-----~P~g~vP~L~d~g~~l   69 (219)
T 1gsu_A            2 VTLGYWDIRGL------AHAIRLLLEYTETPYQERRYKAGPAPDFDPSDWTNEKEKL-G-----LDFPNLPYLIDGDVKL   69 (219)
T ss_dssp             EEEEEESSSGG------GHHHHHHHHHTTCCEEEEEECCCSTTSCCTHHHHTTGGGS-C-----CSSCCSSEEEETTEEE
T ss_pred             cEEEEeCCCch------hHHHHHHHHHcCCCceEEEeccCcccccchhhHhhhcccC-C-----CCCCCCCEEEECCEEE
Confidence            46888888888      99999999999999999988721111  122344333210 0     1334799888777665


Q ss_pred             ec
Q psy3969          82 GV   83 (86)
Q Consensus        82 Gg   83 (86)
                      ..
T Consensus        70 ~e   71 (219)
T 1gsu_A           70 TQ   71 (219)
T ss_dssp             ES
T ss_pred             ec
Confidence            43

>3h1n_A Probable glutathione S-transferase; APC84167, bordetella bronchisepti structural genomics, PSI-2, protein structure initiative; 1.83A {Bordetella bronchiseptica RB50}

Probab=95.56  E-value=0.011  Score=41.14  Aligned_cols=63  Identities=14%  Similarity=0.085  Sum_probs=44.8

Q ss_pred             cEEEEEc-ccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeeee
Q psy3969           4 PYKISNT-VRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCG   82 (86)
Q Consensus         4 ~~~y~ss-~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yiG   82 (86)
                      +.+||.- ++|+      +++++.+|+.+||+|+.+.|+  .+.....+..+.-.       .++. .||-+-.||..+.
T Consensus        22 ~~L~y~~g~~~~------a~~vr~~L~~~gi~ye~~~v~--~~~~~~~~~~~~k~-------~nP~-kVPvL~d~g~~l~   85 (252)
T 3h1n_A           22 YDLWYWDGIPGR------GEFVRLALEAGKIPYRDRARE--PGEDMLDDMRRRRD-------TPPF-APPYLVADGMTIA   85 (252)
T ss_dssp             EEEECCSSSCTT------HHHHHHHHHHHTCCEEEGGGS--TTCCHHHHHTSCCS-------SCCS-SSCEEEETTEEEE
T ss_pred             eEEEeCCCCCcc------hHHHHHHHHhCCCCceEEeec--CchhhHHHHhhccC-------CCCC-CCCEEEECCEEee
Confidence            6788887 7888      999999999999999999997  33333333322001       1467 8999988876654

>3cbu_A Probable GST-related protein; thioredoxin fold, GST C-terminal domain-like fold, structura genomics, joint center for structural genomics; 2.05A {Ralstonia eutropha}

Probab=95.45  E-value=0.031  Score=37.08  Aligned_cols=58  Identities=10%  Similarity=-0.011  Sum_probs=42.2

Q ss_pred             cEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeeeec
Q psy3969           4 PYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCGV   83 (86)
Q Consensus         4 ~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yiGg   83 (86)
                      +.+|+...|++      |.+++.+|..+||+|+.+.|+  . +....+.   .          +...||-+-.||..+.+
T Consensus         3 ~~Ly~~~~s~~------~~~v~~~L~~~gi~~e~~~v~--~-~~~~~~~---~----------P~g~vP~L~~~~~~l~e   60 (214)
T 3cbu_A            3 LKLCGFAASNY------YNKVKLALLEKNVPFEEVLAW--I-GETDTTA---T----------PAGKVPYMITESGSLCE   60 (214)
T ss_dssp             EEEEECTTCHH------HHHHHHHHHHHTCCEEEEECC--T-TSSCTTT---S----------TTCCSCEEEETTEEECS
T ss_pred             EEEecCCCCcH------hHHHHHHHHhCCCCCEEEecC--c-ccCCccc---C----------CCCCCCEEEECCeeeec
Confidence            57888888888      999999999999999999997  2 1100111   1          33479999888875543

>4ags_A Thiol-dependent reductase 1; transferase, leishmaniasis, DE-gluathionylation; HET: MSE GSH; 2.30A {Leishmania infantum}

Probab=95.43  E-value=0.023  Score=42.64  Aligned_cols=62  Identities=10%  Similarity=0.150  Sum_probs=44.9

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEe-CCe
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFN-EED   79 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFi-gd~   79 (86)
                      |.++.+|+...|++      |.+++.+|+.+||+|+.+.|+-  . ....+..+...          ..+||-+-+ ||.
T Consensus       250 ~~~~~L~~~~~sp~------~~rv~~~L~~~gi~y~~~~v~~--~-~~~~~~~~~~P----------~g~vP~L~~~~g~  310 (471)
T 4ags_A          250 NGGHVLYSNLFCPF------VDRARLASELRKFQMHIVEVPL--H-PQPEWYKYINP----------RDTVPALFTPSGE  310 (471)
T ss_dssp             TTSCEEEECTTCHH------HHHHHHHHHHTTCCCEEEECCC--S-SCCTTHHHHCT----------TCCSCEEECTTSC
T ss_pred             CCcEEEEecCCCch------HHHHHHHHHHCCCCcEEEEecC--C-cCcHHHHHhCC----------CCCcCeEEeCCCc
Confidence            45789999999998      9999999999999999999862  2 11122333332          237999975 655


Q ss_pred             ee
Q psy3969          80 YC   81 (86)
Q Consensus        80 yi   81 (86)
                      .+
T Consensus       311 ~l  312 (471)
T 4ags_A          311 AV  312 (471)
T ss_dssp             EE
T ss_pred             Ee
Confidence            44

>3tou_A Glutathione S-transferase protein; GSH binding site, GSH; HET: GSH; 1.75A {Ralstonia solanacearum} PDB: 3tot_A*

Probab=95.43  E-value=0.012  Score=40.02  Aligned_cols=60  Identities=15%  Similarity=0.087  Sum_probs=42.8

Q ss_pred             cEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEe-CCeeee
Q psy3969           4 PYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFN-EEDYCG   82 (86)
Q Consensus         4 ~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFi-gd~yiG   82 (86)
                      ..+|+...|++      |.+++.+|+.+||+|+.+.|+-...+.   +..+.          ++..+||-+-. ||..+.
T Consensus         3 ~~Ly~~~~sp~------~~~vr~~L~~~gi~ye~~~v~~~~~~~---~~~~~----------nP~g~vPvL~~~~g~~l~   63 (226)
T 3tou_A            3 MKLIGSHASPY------TRKVRVVLAEKKIDYQFVLEDVWNADT---QIHQF----------NPLGKVPCLVMDDGGALF   63 (226)
T ss_dssp             CEEEECSSCHH------HHHHHHHHHHTTCCCEEEECCTTSTTC---CGGGT----------CTTCCSCEEECTTSCEEC
T ss_pred             EEEecCCCCch------HHHHHHHHHHcCCCcEEEecCccCCcH---HHHHh----------CCCCCCCEEEeCCCCEec
Confidence            57899999998      999999999999999999886211111   12222          24458999985 665553

>3lsz_A Glutathione S-transferase; xenobiotic, biodegradative metabolism, PSI2, NYSGXRC, structural genomics, protein structure initiative; HET: GSH; 1.70A {Rhodobacter sphaeroides}

Probab=95.21  E-value=0.024  Score=38.15  Aligned_cols=63  Identities=8%  Similarity=-0.039  Sum_probs=43.9

Q ss_pred             cEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCC------CCHh-----HHHHHHHhcCCCCCCCCCCCCCCCC
Q psy3969           4 PYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEP------GKEN-----EKEFMQQNSKATPSDSTVKSNPLPP   72 (86)
Q Consensus         4 ~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~------~d~~-----~r~~M~~~~g~~~~~~~~~~~~tvP   72 (86)
                      +.+|++..| +      |.+++.+|+.+||+|+.+.|+-.      ...+     ...+..+..          +..+||
T Consensus         3 ~~Ly~~~~s-~------~~~v~~~L~~~gi~ye~~~v~~~~~~~d~~~~e~~~~~~~~~~~~~n----------P~g~vP   65 (225)
T 3lsz_A            3 LKIYGVYRS-R------ASRPLWLLAELDLPFEHVPVIQANRVAHPHGPEAPLNTASAAYLAVN----------PLGQIP   65 (225)
T ss_dssp             CEEESCSSS-T------THHHHHHHHHHTCCCEEECCBCGGGSSCTTSTTCCSBTTCHHHHTTC----------TTCCSC
T ss_pred             EEEEeCCCC-c------hHHHHHHHHHcCCCcEEEEeecccccccccccccccccCCHHHHhhC----------cCCCCC
Confidence            578888877 8      99999999999999999988510      0111     333444433          334899


Q ss_pred             eEEeCCeeeec
Q psy3969          73 QIFNEEDYCGV   83 (86)
Q Consensus        73 QIFigd~yiGg   83 (86)
                      -+-.||..+..
T Consensus        66 ~L~~~g~~l~e   76 (225)
T 3lsz_A           66 CLEEEGLILTE   76 (225)
T ss_dssp             EEEETTEEEES
T ss_pred             eEEECCEEEEc
Confidence            99888776643

>4id0_A Glutathione S-transferase-like protein YIBF; GST, enzyme function initiative, structural genomics; HET: GSF; 1.10A {Pseudomonas fluorescens} PDB: 4ibp_A*

Probab=95.20  E-value=0.0046  Score=41.24  Aligned_cols=63  Identities=10%  Similarity=0.004  Sum_probs=41.5

Q ss_pred             cEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCH-hHHHHHHHhcCCCCCCCCCCCCCCCCeEE-eCCeee
Q psy3969           4 PYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKE-NEKEFMQQNSKATPSDSTVKSNPLPPQIF-NEEDYC   81 (86)
Q Consensus         4 ~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~-~~r~~M~~~~g~~~~~~~~~~~~tvPQIF-igd~yi   81 (86)
                      ..+|+...|++      |.+++.+|+.+||+|+.+.|+-...+ ....+..+.          ++..+||-+- .||..+
T Consensus         3 ~~Ly~~~~s~~------~~~v~~~L~~~gi~y~~~~v~~~~~~~~~~~~~~~~----------nP~g~vP~L~~~~g~~l   66 (214)
T 4id0_A            3 LTLFHNPASPY------VRKVMVLLHETGQLNRVALQASQLSPVAPDAALNQD----------NPLGKIPALRLDNGQVL   66 (214)
T ss_dssp             EEEEECSSCHH------HHHHHHHHHHHTCGGGEEEEECCCCSSSCCSSCCTT----------CTTCCSSEEECTTSCEE
T ss_pred             eEEecCCCCCh------HHHHHHHHHHcCCCcceEEeecccCccCCcHHHHhc----------CCCcCCCeEEecCCcEe
Confidence            67899999988      99999999999999876665411221 111122222          3455899998 566554


Q ss_pred             e
Q psy3969          82 G   82 (86)
Q Consensus        82 G   82 (86)
                      .
T Consensus        67 ~   67 (214)
T 4id0_A           67 Y   67 (214)
T ss_dssp             C
T ss_pred             e
Confidence            3

>2x64_A Glutathione-S-transferase; detoxification enzyme; HET: GSH; 2.30A {Xylella fastidiosa}

Probab=94.20  E-value=0.11  Score=34.19  Aligned_cols=61  Identities=3%  Similarity=-0.141  Sum_probs=40.5

Q ss_pred             cEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeeeec
Q psy3969           4 PYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCGV   83 (86)
Q Consensus         4 ~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yiGg   83 (86)
                      ..+|+.. +++      |.+++.+|..+||+|+.+.|+  .......+..+..          +...||-+-.||..+.+
T Consensus         3 ~~Ly~~~-~s~------~~~v~~~L~~~gi~~e~~~v~--~~~~~~~~~~~~~----------P~g~vP~L~~~g~~l~e   63 (207)
T 2x64_A            3 MKLYIMP-GAC------SLADHILLRWSGSSFDLQFLD--HQSMKAPEYLALN----------PSGAVPALQVGDWVLTQ   63 (207)
T ss_dssp             EEEEECT-TST------THHHHHHHHHHTCCEEEEECC--TTTTSSHHHHTTC----------TTCCSCEEEETTEEECC
T ss_pred             EEEEcCC-CCc------HHHHHHHHHHcCCCcceEEec--ccccCChhHHhcC----------CCCcCCeEeECCEEEee
Confidence            4577755 334      788999999999999999987  2211223344433          23479998877766543

>3uar_A Glutathione S-transferase; GSH binding site; HET: GSH; 2.60A {Methylococcus capsulatus} PDB: 3uap_A*

Probab=94.14  E-value=0.055  Score=36.86  Aligned_cols=62  Identities=8%  Similarity=0.005  Sum_probs=39.5

Q ss_pred             cEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCH-hHHHHHHHhcCCCCCCCCCCCCCCCCeEEeC-Ceee
Q psy3969           4 PYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKE-NEKEFMQQNSKATPSDSTVKSNPLPPQIFNE-EDYC   81 (86)
Q Consensus         4 ~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~-~~r~~M~~~~g~~~~~~~~~~~~tvPQIFig-d~yi   81 (86)
                      ..+|++..| .      |.+++.+|+.+||+|+.+.|+-...+ ....++.+...          ..+||-+-.+ |..+
T Consensus         3 ~~Ly~~~~s-~------~~~vr~~L~~~gi~ye~~~v~~~~~~~~~~~~~~~~nP----------~g~vP~L~~~dg~~l   65 (227)
T 3uar_A            3 MKLYYFPGA-C------SLAPHIVLREAGLDFELENVDLGTKKTGSGADFLQVNP----------KGYVPALQLDDGQVL   65 (227)
T ss_dssp             EEEEECTTS-T------THHHHHHHHHHTCCEEEEEEETTTTEETTCCBHHHHCT----------TCCSCEEECTTCCEE
T ss_pred             EEEecCCCc-c------hHHHHHHHHHcCCCceEEEeccCcCcccCCHHHHHhCC----------CCCCCeEEECCCCEE
Confidence            567766553 4      88999999999999999888621211 11233444442          2379999874 4444


Q ss_pred             e
Q psy3969          82 G   82 (86)
Q Consensus        82 G   82 (86)
                      .
T Consensus        66 ~   66 (227)
T 3uar_A           66 T   66 (227)
T ss_dssp             E
T ss_pred             e
Confidence            3

>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A

Probab=94.13  E-value=0.32  Score=29.28  Aligned_cols=57  Identities=7%  Similarity=0.065  Sum_probs=39.3

Q ss_pred             cEEEEEcccCchhchHHHHHHHHHHHhC-----CCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEe--
Q psy3969           4 PYKISNTVRGVKGVKKRQQRVLMILDSK-----NIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFN--   76 (86)
Q Consensus         4 ~~~y~ss~sgn~~vK~~q~~a~~lL~~k-----~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFi--   76 (86)
                      +..|+++-|+.      |.++...|+..     ++.|-.||++  .+++    +.++.+  -+        .+|.+++  
T Consensus        23 vv~f~a~wC~~------C~~~~~~l~~~~~~~~~v~~~~vd~~--~~~~----l~~~~~--v~--------~~Pt~~~~~   80 (110)
T 2l6c_A           23 IVFFHKNLCPH------CKNMEKVLDKFGARAPQVAISSVDSE--ARPE----LMKELG--FE--------RVPTLVFIR   80 (110)
T ss_dssp             EEEEECSSCST------HHHHHHHHHHHHTTCTTSCEEEEEGG--GCHH----HHHHTT--CC--------SSCEEEEEE
T ss_pred             EEEEECCCCHh------HHHHHHHHHHHHHHCCCcEEEEEcCc--CCHH----HHHHcC--Cc--------ccCEEEEEE
Confidence            35688888998      88877777652     5788889987  4554    334444  22        5788886  


Q ss_pred             CCeeee
Q psy3969          77 EEDYCG   82 (86)
Q Consensus        77 gd~yiG   82 (86)
                      +|+.++
T Consensus        81 ~G~~v~   86 (110)
T 2l6c_A           81 DGKVAK   86 (110)
T ss_dssp             SSSEEE
T ss_pred             CCEEEE
Confidence            887766

>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*

Probab=94.00  E-value=0.081  Score=33.86  Aligned_cols=39  Identities=13%  Similarity=0.211  Sum_probs=31.1

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEcc
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDIT   41 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~   41 (86)
                      |+|+.|+|.|.+||.  ++=.+++..-|.+.|++.+.+|+.
T Consensus         1 M~ki~I~y~S~tGnT--~~~A~~ia~~l~~~g~~v~~~~~~   39 (148)
T 3f6r_A            1 MSKVLIVFGSSTGNT--ESIAQKLEELIAAGGHEVTLLNAA   39 (148)
T ss_dssp             -CEEEEEEECSSSHH--HHHHHHHHHHHHTTTCEEEEEETT
T ss_pred             CCeEEEEEECCCchH--HHHHHHHHHHHHhCCCeEEEEehh
Confidence            889999999999996  344555666678889999999997

>3fy7_A Chloride intracellular channel protein 3; GST, glutathione, CLIC, chloride channel, ION transport, ionic channel, nucleus, transport, gated channel; 1.95A {Homo sapiens} PDB: 3kjy_A

Probab=93.61  E-value=0.24  Score=34.31  Aligned_cols=67  Identities=13%  Similarity=0.189  Sum_probs=39.0

Q ss_pred             cEEEEEcccC--chhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeee
Q psy3969           4 PYKISNTVRG--VKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYC   81 (86)
Q Consensus         4 ~~~y~ss~sg--n~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yi   81 (86)
                      +++|....+.  +...=..|+++..+|..+||+|+.+.|+  .. ....+..+..          +..+||-+-.||..+
T Consensus        26 i~l~~ka~~~~~s~~~sP~~~rv~~~L~~~gi~ye~~~v~--~~-~~~~~~~~~n----------P~g~VPvL~~dg~~l   92 (250)
T 3fy7_A           26 LQLFVKASEDGESVGHCPSCQRLFMVLLLKGVPFTLTTVD--TR-RSPDVLKDFA----------PGSQLPILLYDSDAK   92 (250)
T ss_dssp             EEEEEEBCTTSSSBCSCHHHHHHHHHHHHHTCCCEEEEEC---------------------------CCSCEEEETTEEE
T ss_pred             ceEEEEeCCCCCCCCCChHHHHHHHHHHHcCCccEEEECC--Cc-cChHHHHhhC----------CCCCCCEEEECCEEe
Confidence            5677753332  1122345999999999999999999987  22 2223444433          234899999888766


Q ss_pred             ec
Q psy3969          82 GV   83 (86)
Q Consensus        82 Gg   83 (86)
                      ..
T Consensus        93 ~E   94 (250)
T 3fy7_A           93 TD   94 (250)
T ss_dssp             CC
T ss_pred             cC
Confidence            43

>2yv7_A CG10997-PA, LD46306P, CLIC; dmclic, chloride ION channel, GST fold, metal transport; 1.70A {Drosophila melanogaster}

Probab=93.07  E-value=0.17  Score=35.91  Aligned_cols=69  Identities=16%  Similarity=0.037  Sum_probs=41.3

Q ss_pred             CCCcEEEEEcccCchhch---HHHHHHHHHH----HhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCe
Q psy3969           1 MKKPYKISNTVRGVKGVK---KRQQRVLMIL----DSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQ   73 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK---~~q~~a~~lL----~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQ   73 (86)
                      |..+.+|....+++...-   .-|+++..+|    +.+||+|+.+.|+  .. ..-.+..+..          +...||-
T Consensus        20 ~~~i~Ly~~~~s~~~~~~~~cP~~~rv~~~L~ll~~~~gi~ye~~~v~--~~-~~~~~~~~~n----------P~gkVPv   86 (260)
T 2yv7_A           20 VPEIELIIKASTIDGRRKGACLFCQEYFMDLYLLAELKTISLKVTTVD--MQ-KPPPDFRTNF----------EATHPPI   86 (260)
T ss_dssp             CCEEEEEEEBCTTTSSSBCCCHHHHHHHHHHHHHHHTTSSEEEEEEEC--TT-SCC-----CC----------TTCCSCE
T ss_pred             CccEEEEEeccCCCCCccCcChHHHHHHHHHHhHHHhcCCCceEEEec--cc-cCCHHHHhhC----------CCCCCCE
Confidence            455678865544332221   4488998888    8999999998886  21 1112233322          3448999


Q ss_pred             EEeCCeeee
Q psy3969          74 IFNEEDYCG   82 (86)
Q Consensus        74 IFigd~yiG   82 (86)
                      +-.||..+.
T Consensus        87 L~d~g~~l~   95 (260)
T 2yv7_A           87 LIDNGLAIL   95 (260)
T ss_dssp             EEETTEEEC
T ss_pred             EEECCEEEe
Confidence            987776653

>2yv9_A Chloride intracellular channel EXC-4; chloride ION channel, CLIC, GST fold, metal transport; 1.60A {Caenorhabditis elegans}

Probab=92.14  E-value=0.79  Score=32.81  Aligned_cols=66  Identities=14%  Similarity=-0.022  Sum_probs=41.2

Q ss_pred             CCCcEEEEEcccCchhch---HHHHHHHHHH----HhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCe
Q psy3969           1 MKKPYKISNTVRGVKGVK---KRQQRVLMIL----DSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQ   73 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK---~~q~~a~~lL----~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQ   73 (86)
                      |..+.+|....+.+....   .-|+++..+|    +.+||+|+.+.|+- .+.   . ..+...          ...||-
T Consensus        17 ~~~i~Ly~~~~~~~~~~~~~cP~~~rv~~~L~lL~e~kgi~ye~~~vd~-~~~---p-fl~~nP----------~GkVPv   81 (291)
T 2yv9_A           17 KPLLELYVKASGIDARRIGADLFCQEFWMELYALYEIGVARVEVKTVNV-NSE---A-FKKNFL----------GAQPPI   81 (291)
T ss_dssp             SCEEEEEEEBCSSCTTSBCCCHHHHHHHHHHHHHHHTTSCEEEEEEECT-TCH---H-HHHHHT----------TCCSCE
T ss_pred             CCCEEEEEecCCCCcCccCcChHHHHHHHHHHHHHHhcCceeEEEEeCC-CCh---h-HHhcCC----------CCCCCE
Confidence            345678876544332222   3478998888    88999999998872 122   2 333332          237998


Q ss_pred             EEe--CCeee
Q psy3969          74 IFN--EEDYC   81 (86)
Q Consensus        74 IFi--gd~yi   81 (86)
                      +-.  ||..+
T Consensus        82 L~d~~~g~~l   91 (291)
T 2yv9_A           82 MIEEEKELTY   91 (291)
T ss_dssp             EEEGGGTEEE
T ss_pred             EEEcCCCeEE
Confidence            877  66554

>2fno_A AGR_PAT_752P; thioredoxin fold, GST C-terminal domain-like fold, structura genomics, joint center for structural genomics, JCSG; 2.00A {Agrobacterium tumefaciens} SCOP: a.45.1.1 c.47.1.5

Probab=91.99  E-value=0.052  Score=37.99  Aligned_cols=35  Identities=17%  Similarity=-0.046  Sum_probs=29.3

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEcc
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDIT   41 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~   41 (86)
                      |..+.+|+...+++      +.+++.+|+.+||+|+.++++
T Consensus        17 ~~~~~Ly~~~~~~~------~~~vrl~L~e~gi~ye~~~~~   51 (248)
T 2fno_A           17 MNTFDLYYWPVPFR------GQLIRGILAHCGCSWDEHDVD   51 (248)
T ss_dssp             CBSEEEECCSSSST------THHHHHHHHHTTCCEECCCHH
T ss_pred             CCceEEEecCCCCc------hHHHHHHHHHcCCCcEeeccc
Confidence            35677888887777      889999999999999988764

>1f2e_A Glutathione S-transferase; GST complexed with glutathione, thioredoxin superfamily fold transferase; HET: GSH; 2.30A {Sphingomonas paucimobilis} SCOP: a.45.1.1 c.47.1.5

Probab=91.56  E-value=0.18  Score=33.11  Aligned_cols=60  Identities=7%  Similarity=0.060  Sum_probs=37.8

Q ss_pred             EEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHH--HHHHHhcCCCCCCCCCCCCCCCCeEE-eCCeee
Q psy3969           5 YKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEK--EFMQQNSKATPSDSTVKSNPLPPQIF-NEEDYC   81 (86)
Q Consensus         5 ~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r--~~M~~~~g~~~~~~~~~~~~tvPQIF-igd~yi   81 (86)
                      .+|++. +++      |.+++.+|..+||+|+.+.|+- .+.+.+  .+..+...          ...||-+- .||..+
T Consensus         2 ~Ly~~~-~~~------~~~v~~~L~~~gi~~e~~~v~~-~~~~~~~~~~~~~~~P----------~g~vP~L~~~~g~~l   63 (201)
T 1f2e_A            2 KLFISP-GAC------SLAPHIALRETGADFEAVKVDL-AVRKTEAGEDFLTVNP----------SGKVPALTLDSGETL   63 (201)
T ss_dssp             EEEECT-TST------THHHHHHHHHHTCCCEEEEEET-TTTEETTSCBHHHHCT----------TCCSCEEECTTSCEE
T ss_pred             eeeecC-Ccc------HHHHHHHHHHcCCCceEEEeec-CCCCCCCChHHHccCc----------CCCCceEEecCCcEe
Confidence            467654 456      8899999999999999888762 121111  23344332          23799887 455554


Q ss_pred             e
Q psy3969          82 G   82 (86)
Q Consensus        82 G   82 (86)
                      .
T Consensus        64 ~   64 (201)
T 1f2e_A           64 T   64 (201)
T ss_dssp             E
T ss_pred             e
Confidence            3

>4gci_A Glutathione S-transferase; GST, enzyme function initiative, structural genomics; HET: GSH; 1.50A {Yersinia pestis} PDB: 4g9h_A*

Probab=91.10  E-value=0.2  Score=33.55  Aligned_cols=61  Identities=10%  Similarity=0.090  Sum_probs=36.3

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHH-HHHHHhcCCCCCCCCCCCCCCCCeEEeCC
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEK-EFMQQNSKATPSDSTVKSNPLPPQIFNEE   78 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r-~~M~~~~g~~~~~~~~~~~~tvPQIFigd   78 (86)
                      |.-..+|++..| +      ..++.-+|..+||+|+.+.|+-...++.+ .+..+..          +..+||-+-.+|
T Consensus         1 M~mmkLY~~p~s-~------s~rvri~L~e~gl~~e~~~vd~~~~~~~~~~~~~~~n----------P~g~vP~L~~d~   62 (211)
T 4gci_A            1 MVMMKLFYKPGA-C------SLSPHIVLREAGLDFSIERVDLVTKKTETGADYLSIN----------PKGQVPALVLDD   62 (211)
T ss_dssp             -CCEEEEECTTS-T------THHHHHHHHHTTCCEEEEEEETTTTEETTSCBGGGTC----------TTCCSCEEECTT
T ss_pred             CceEEEEeCCCC-c------HHHHHHHHHHhCCCCeEEEecCCCCcccCCHHHHHhC----------CCCCCCccccCC
Confidence            555678887533 3      35788999999999987666411222222 1233322          344799887665

>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1

Probab=90.94  E-value=1.3  Score=26.25  Aligned_cols=55  Identities=7%  Similarity=0.114  Sum_probs=35.6

Q ss_pred             EEEEEcccCchhchHHHHHHHHHHHh-----CCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEe--C
Q psy3969           5 YKISNTVRGVKGVKKRQQRVLMILDS-----KNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFN--E   77 (86)
Q Consensus         5 ~~y~ss~sgn~~vK~~q~~a~~lL~~-----k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFi--g   77 (86)
                      ..|+++-|+.      |.+....|+.     .++.|-.||++  .+++    +.++.+  -+        .+|.+++  +
T Consensus        31 v~f~a~~C~~------C~~~~~~l~~l~~~~~~v~~~~vd~~--~~~~----~~~~~~--v~--------~~Pt~~~~~~   88 (112)
T 1syr_A           31 VDFFAEWCGP------CKRIAPFYEECSKTYTKMVFIKVDVD--EVSE----VTEKEN--IT--------SMPTFKVYKN   88 (112)
T ss_dssp             EEEECTTCHH------HHHHHHHHHHHHHHCTTSEEEEEETT--TTHH----HHHHTT--CC--------SSSEEEEEET
T ss_pred             EEEECCCCHH------HHHHHHHHHHHHHHcCCCEEEEEECC--CCHH----HHHHcC--CC--------cccEEEEEEC
Confidence            3467777777      7777766655     47999999998  5553    333444  22        5777665  6


Q ss_pred             Ceee
Q psy3969          78 EDYC   81 (86)
Q Consensus        78 d~yi   81 (86)
                      |+.+
T Consensus        89 G~~~   92 (112)
T 1syr_A           89 GSSV   92 (112)
T ss_dssp             TEEE
T ss_pred             CcEE
Confidence            6654

>1pmt_A PMGST, GST B1-1, glutathione transferase; glutathione-conjugating, A putative oxidoreduct; HET: GSH; 2.50A {Proteus mirabilis} SCOP: a.45.1.1 c.47.1.5 PDB: 2pmt_A*

Probab=90.87  E-value=0.18  Score=33.24  Aligned_cols=61  Identities=11%  Similarity=0.093  Sum_probs=37.4

Q ss_pred             EEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhH-HHHHHHhcCCCCCCCCCCCCCCCCeEE-eCCeeee
Q psy3969           5 YKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENE-KEFMQQNSKATPSDSTVKSNPLPPQIF-NEEDYCG   82 (86)
Q Consensus         5 ~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~-r~~M~~~~g~~~~~~~~~~~~tvPQIF-igd~yiG   82 (86)
                      .+|+...| .      |.+++.+|..+||+|+.+.|+-...+.. ..+..+..          +..+||-+- .||..+.
T Consensus         2 ~Ly~~~~s-~------~~~v~~~l~~~gi~~e~~~v~~~~~~~~~~~~~~~~n----------P~g~vP~L~~~~g~~l~   64 (203)
T 1pmt_A            2 KLYYTPGS-C------SLSPHIVLRETGLDFSIERIDLRTKKTESGKDFLAIN----------PKGQVPVLQLDNGDILT   64 (203)
T ss_dssp             EEEECTTS-T------THHHHHHHHHTTCCCEEEEEETTTTEETTSCBGGGTC----------TTCCSCEEECTTSCEEE
T ss_pred             eeeccCCc-c------hHHHHHHHHHcCCCceEEEeccccccccCCHHHHhcC----------CCCCCCeEEecCCcEEe
Confidence            46766554 4      7789999999999999988862111111 12223322          344899887 5555543

>2pvq_A Glutathione S-transferase; xenobiotics detoxification, H-site; HET: GSH; 1.80A {Ochrobactrum anthropi} PDB: 2nto_A*

Probab=90.85  E-value=0.21  Score=32.80  Aligned_cols=60  Identities=7%  Similarity=-0.036  Sum_probs=38.2

Q ss_pred             EEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHh-H-HHHHHHhcCCCCCCCCCCCCCCCCeEE-eCCeee
Q psy3969           5 YKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKEN-E-KEFMQQNSKATPSDSTVKSNPLPPQIF-NEEDYC   81 (86)
Q Consensus         5 ~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~-~-r~~M~~~~g~~~~~~~~~~~~tvPQIF-igd~yi   81 (86)
                      .+|+...| .      |.+++.+|..+||+|+.+.|+- .+.+ . ..+..+..          +..+||-+- .||..+
T Consensus         2 ~Ly~~~~s-~------~~~v~~~L~~~gi~~e~~~v~~-~~~~~~~~~~~~~~~----------P~g~vP~L~~~~g~~l   63 (201)
T 2pvq_A            2 KLYYKVGA-A------SLAPHIILSEAGLPYELEAVDL-KAKKTADGGDYFAVN----------PRGAVPALEVKPGTVI   63 (201)
T ss_dssp             EEEECTTS-T------THHHHHHHHHHTCCCEEEECBT-TTTBCTTSCBGGGTC----------TTCCSCEEEEETTEEE
T ss_pred             eeeeCCCc-c------HHHHHHHHHhcCCCceEEEecc-cccCCCCCHHHHhhC----------cCCCCCEEEeCCCCEE
Confidence            46766554 4      6789999999999999998872 1111 0 11222222          344899987 577655


Q ss_pred             e
Q psy3969          82 G   82 (86)
Q Consensus        82 G   82 (86)
                      .
T Consensus        64 ~   64 (201)
T 2pvq_A           64 T   64 (201)
T ss_dssp             E
T ss_pred             e
Confidence            4

>1n2a_A Glutathione S-transferase; HET: GTS; 1.90A {Escherichia coli} SCOP: a.45.1.1 c.47.1.5 PDB: 1a0f_A*

Probab=90.81  E-value=0.21  Score=32.83  Aligned_cols=61  Identities=10%  Similarity=0.043  Sum_probs=37.4

Q ss_pred             EEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhH-HHHHHHhcCCCCCCCCCCCCCCCCeEEe-CCeeee
Q psy3969           5 YKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENE-KEFMQQNSKATPSDSTVKSNPLPPQIFN-EEDYCG   82 (86)
Q Consensus         5 ~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~-r~~M~~~~g~~~~~~~~~~~~tvPQIFi-gd~yiG   82 (86)
                      .+|++..| .      |.+++.+|..+||+|+.+.|+-...++. ..+..+..          +...||-+-. ||..+.
T Consensus         2 ~Ly~~~~s-~------~~~v~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~~~n----------P~g~vP~L~~~~g~~l~   64 (201)
T 1n2a_A            2 KLFYKPGA-C------SLASHITLRESGKDFTLVSVDLMKKRLENGDDYFAVN----------PKGQVPALLLDDGTLLT   64 (201)
T ss_dssp             EEEECTTS-T------THHHHHHHHHTTCCCEEEEEETTTTEETTCCBGGGTC----------TTCCSCEEECTTSCEEE
T ss_pred             eeecCCCc-c------hHHHHHHHHHcCCCCeeEEEeCCCccccCCHHHHhhC----------cCCCCCeEEecCCcEEe
Confidence            46776654 4      6789999999999999988862111111 12222322          3448998875 555443

>1b8x_A Protein (AML-1B); nuclear matrix targeting signal protein, signal protein; 2.70A {Escherichia coli} SCOP: a.45.1.1 c.47.1.5

Probab=90.50  E-value=0.14  Score=36.82  Aligned_cols=32  Identities=16%  Similarity=0.138  Sum_probs=28.8

Q ss_pred             cEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEcc
Q psy3969           4 PYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDIT   41 (86)
Q Consensus         4 ~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~   41 (86)
                      +.+|+...|++      |++++.+|+.+||+|+.+.|+
T Consensus         2 ~~Lyy~~~s~~------~~~vr~~L~e~gi~ye~~~v~   33 (280)
T 1b8x_A            2 PILGYWKIKGL------VQPTRLLLEYLEEKYEEHLYE   33 (280)
T ss_dssp             CCCEEESSSTT------THHHHHHHHHTTCCCCCEEEC
T ss_pred             cEEEEeCCCch------HHHHHHHHHHcCCCcEEEEeC
Confidence            56788888888      999999999999999998886

>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A

Probab=90.37  E-value=0.6  Score=28.42  Aligned_cols=55  Identities=9%  Similarity=0.100  Sum_probs=34.8

Q ss_pred             EEEEEcccCchhchHHHHHHHHHHHhC-----CCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEe--C
Q psy3969           5 YKISNTVRGVKGVKKRQQRVLMILDSK-----NIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFN--E   77 (86)
Q Consensus         5 ~~y~ss~sgn~~vK~~q~~a~~lL~~k-----~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFi--g   77 (86)
                      ..|+++-|+.      |.++...|+..     ++.|-.||++  .+++..    ++.+  -+        .+|.+++  +
T Consensus        35 v~F~a~wC~~------C~~~~p~l~~~~~~~~~v~~~~vd~~--~~~~l~----~~~~--v~--------~~Pt~~~~~~   92 (114)
T 2oe3_A           35 IDFYATWCGP------CKMMQPHLTKLIQAYPDVRFVKCDVD--ESPDIA----KECE--VT--------AMPTFVLGKD   92 (114)
T ss_dssp             EEEECTTCHH------HHHTHHHHHHHHHHCTTSEEEEEETT--TCHHHH----HHTT--CC--------SBSEEEEEET
T ss_pred             EEEECCCCHH------HHHHHHHHHHHHHHCCCCEEEEEECC--CCHHHH----HHCC--CC--------cccEEEEEeC
Confidence            4577777877      66666555543     5999999998  565533    3334  22        4677655  7


Q ss_pred             Ceee
Q psy3969          78 EDYC   81 (86)
Q Consensus        78 d~yi   81 (86)
                      |+.+
T Consensus        93 G~~~   96 (114)
T 2oe3_A           93 GQLI   96 (114)
T ss_dssp             TEEE
T ss_pred             CeEE
Confidence            7654

>3ktb_A Arsenical resistance operon trans-acting represso; alpha-beta-alpha sandwich, helix-turn-helix, structural GENO PSI-2; 2.10A {Bacteroides vulgatus}

Probab=90.20  E-value=1.9  Score=28.07  Aligned_cols=69  Identities=13%  Similarity=0.045  Sum_probs=47.3

Q ss_pred             CCCcEEEEEcccCc-----hhchHHHH---HHHHHHHhCCCceEEEEccCCCCHhHHH------HHHHhcCCCCCCCCCC
Q psy3969           1 MKKPYKISNTVRGV-----KGVKKRQQ---RVLMILDSKNIDYTVIDITEPGKENEKE------FMQQNSKATPSDSTVK   66 (86)
Q Consensus         1 ~~~~~~y~ss~sgn-----~~vK~~q~---~a~~lL~~k~I~f~eiDI~~~~d~~~r~------~M~~~~g~~~~~~~~~   66 (86)
                      |+|++||=-..|=+     +.|.++..   .+..-|+.+||+.+..+++  .+|.+..      .+.++.|         
T Consensus         4 M~~i~ifepamCCstGvCG~~vd~eL~~~~~~~~~lk~~Gi~V~RyNL~--~~P~~F~~N~~V~~~L~~~G---------   72 (106)
T 3ktb_A            4 MKKIEIFDPAMCCPTGLCGTNINPELMRIAVVIESLKKQGIIVTRHNLR--DEPQVYVSNKTVNDFLQKHG---------   72 (106)
T ss_dssp             CCCEEEEECSCSSTTSCSSSCCCHHHHHHHHHHHHHHHTTCCCEEEETT--TCTTHHHHSHHHHHHHHTTC---------
T ss_pred             CceEEEechhhccCCCCcCCCCCHHHHHHHHHHHHHHHCCCEEEEEccc--cChHHHhcCHHHHHHHHHcC---------
Confidence            89999997644332     34555544   4567788899999999999  7886432      2333344         


Q ss_pred             CCCCCCeEEeCCeee
Q psy3969          67 SNPLPPQIFNEEDYC   81 (86)
Q Consensus        67 ~~~tvPQIFigd~yi   81 (86)
                       .-..|-+++||+-+
T Consensus        73 -~~~LP~~~VDGevv   86 (106)
T 3ktb_A           73 -ADALPITLVDGEIA   86 (106)
T ss_dssp             -GGGCSEEEETTEEE
T ss_pred             -cccCCEEEECCEEE
Confidence             12569999999865

>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...

Probab=89.86  E-value=0.85  Score=26.34  Aligned_cols=56  Identities=16%  Similarity=0.170  Sum_probs=36.7

Q ss_pred             EEEEEcccCchhchHHHHHHHHHHHh-----CCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEe--C
Q psy3969           5 YKISNTVRGVKGVKKRQQRVLMILDS-----KNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFN--E   77 (86)
Q Consensus         5 ~~y~ss~sgn~~vK~~q~~a~~lL~~-----k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFi--g   77 (86)
                      ..|+++-|+.      |.+....|+.     .++.|-.+|++  .+++..    ++.+  -+        .+|.+++  +
T Consensus        25 v~f~~~~C~~------C~~~~~~~~~~~~~~~~~~~~~vd~~--~~~~~~----~~~~--v~--------~~Pt~~~~~~   82 (105)
T 3m9j_A           25 VDFSATWCGP------CKMIKPFFHSLSEKYSNVIFLEVDVD--DCQDVA----SESE--VK--------SMPTFQFFKK   82 (105)
T ss_dssp             EEEECTTCHH------HHHHHHHHHHHHHHSTTSEEEEEETT--TCHHHH----HHTT--CC--------BSSEEEEEET
T ss_pred             EEEECCCChh------hHHHHHHHHHHHHHccCeEEEEEEhh--hhHHHH----HHcC--CC--------cCcEEEEEEC
Confidence            3477777777      7777666665     57999999998  565543    3333  22        4677766  7


Q ss_pred             Ceeee
Q psy3969          78 EDYCG   82 (86)
Q Consensus        78 d~yiG   82 (86)
                      |+.++
T Consensus        83 g~~~~   87 (105)
T 3m9j_A           83 GQKVG   87 (105)
T ss_dssp             TEEEE
T ss_pred             CeEEE
Confidence            76654

>1bg5_A MAB, fusion protein of alpha-Na,K-ATPase with glutathione S-transferase; ankyrin binding, carrier crystallization, ION transport; 2.60A {Rattus norvegicus} SCOP: a.45.1.1 c.47.1.5

Probab=89.80  E-value=0.11  Score=36.06  Aligned_cols=32  Identities=16%  Similarity=0.138  Sum_probs=28.7

Q ss_pred             cEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEcc
Q psy3969           4 PYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDIT   41 (86)
Q Consensus         4 ~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~   41 (86)
                      +.+|+...|++      |.++..+|+.+||+|+.+.|+
T Consensus         3 ~~Ly~~~~s~~------~~~vr~~L~~~gi~ye~~~v~   34 (254)
T 1bg5_A            3 PILGYWKIKGL------VQPTRLLLEYLEEKYEEHLYE   34 (254)
T ss_dssp             CBCCSCSCSTT------THHHHHHHHHTTCCCBCCCCC
T ss_pred             cEEEEeCCcch------hHHHHHHHHHcCCCceEEeeC
Confidence            67788888888      999999999999999998886

>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}

Probab=89.49  E-value=2.1  Score=25.15  Aligned_cols=56  Identities=9%  Similarity=0.113  Sum_probs=34.0

Q ss_pred             EEEEEcccCchhchHHHHHHHHHHH-------hCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEe-
Q psy3969           5 YKISNTVRGVKGVKKRQQRVLMILD-------SKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFN-   76 (86)
Q Consensus         5 ~~y~ss~sgn~~vK~~q~~a~~lL~-------~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFi-   76 (86)
                      ..|+++-|+.      |.+....|+       ..++.|-.+|++  .+++    +.++.+  -+        .+|.+++ 
T Consensus        26 v~f~a~wC~~------C~~~~~~~~~~~~~~~~~~~~~~~vd~~--~~~~----~~~~~~--v~--------~~Pt~~~~   83 (112)
T 3d6i_A           26 LYFHTSWAEP------CKALKQVFEAISNEPSNSNVSFLSIDAD--ENSE----ISELFE--IS--------AVPYFIII   83 (112)
T ss_dssp             EEEECCC--C------HHHHHHHHHHHHHCGGGTTSEEEEEETT--TCHH----HHHHTT--CC--------SSSEEEEE
T ss_pred             EEEECCCCHH------HHHHHHHHHHHHHhcCCCCEEEEEEecc--cCHH----HHHHcC--CC--------cccEEEEE
Confidence            3577888888      665555444       457999999998  5654    333344  22        5787755 


Q ss_pred             -CCeeee
Q psy3969          77 -EEDYCG   82 (86)
Q Consensus        77 -gd~yiG   82 (86)
                       +|+.++
T Consensus        84 ~~G~~~~   90 (112)
T 3d6i_A           84 HKGTILK   90 (112)
T ss_dssp             ETTEEEE
T ss_pred             ECCEEEE
Confidence             777654

>3kgk_A Arsenical resistance operon trans-acting represso; alpha+beta, chaperone, DNA-binding, RE transcription, transcription regulation; 1.40A {Escherichia coli} PDB: 3mwh_A

Probab=89.46  E-value=1.7  Score=28.51  Aligned_cols=68  Identities=13%  Similarity=0.118  Sum_probs=42.6

Q ss_pred             CCCcEEEEE------cccCchhchHH---HHHHHHHHHhCCCceEEEEccCCCCHhHH------HHHHHhcCCCCCCCCC
Q psy3969           1 MKKPYKISN------TVRGVKGVKKR---QQRVLMILDSKNIDYTVIDITEPGKENEK------EFMQQNSKATPSDSTV   65 (86)
Q Consensus         1 ~~~~~~y~s------s~sgn~~vK~~---q~~a~~lL~~k~I~f~eiDI~~~~d~~~r------~~M~~~~g~~~~~~~~   65 (86)
                      |+|++||=-      .+||- .|.+.   -.....-|+.+||+.+.++++  .+|.+.      ..+.++.|.       
T Consensus         1 M~~i~ifepamCCstGvCG~-~vd~~L~~~~~~~~~lk~~Gi~V~RyNL~--~~P~aF~~N~~V~~~L~~~G~-------   70 (110)
T 3kgk_A            1 MKTLMVFDPAMAASTGVCGT-DVDQALVDFSTDVQWLKQSGVQIERFNLA--QQPMSFVQNEKVKAFIEASGA-------   70 (110)
T ss_dssp             CCCEEEEECC--------------CHHHHHHHHHHHHHHHTCCEEEEETT--TCTTHHHHSHHHHHHHHHHCG-------
T ss_pred             CCceEEecchhccccCCcCC-CCCHHHHHHHHHHHHHHHCCCeEEEEccc--cChHHHhcCHHHHHHHHHcCc-------
Confidence            899999954      44442 44443   344577788899999999999  788633      233344441       


Q ss_pred             CCCCCCCeEEeCCeee
Q psy3969          66 KSNPLPPQIFNEEDYC   81 (86)
Q Consensus        66 ~~~~tvPQIFigd~yi   81 (86)
                         -..|-+++||+-+
T Consensus        71 ---~~LP~~~VDGevv   83 (110)
T 3kgk_A           71 ---EGLPLLLLDGETV   83 (110)
T ss_dssp             ---GGCCEEEETTEEE
T ss_pred             ---ccCCEEEECCEEE
Confidence               1469999999865

>3c8e_A YGHU, glutathione S-transferase homologue; glutathione transferase homologue, E. coli; HET: GSH; 1.50A {Escherichia coli}

Probab=89.01  E-value=1  Score=31.88  Aligned_cols=58  Identities=14%  Similarity=0.047  Sum_probs=37.5

Q ss_pred             cEEEEEcccCchhchHHHHHHHHHHHhC------CCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeC
Q psy3969           4 PYKISNTVRGVKGVKKRQQRVLMILDSK------NIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNE   77 (86)
Q Consensus         4 ~~~y~ss~sgn~~vK~~q~~a~~lL~~k------~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFig   77 (86)
                      +.+|+. .|++      |.+++.+|..+      ||+|+.+.|+-...+....+..+...          ...||-+-.+
T Consensus        45 ~~Ly~~-~sp~------~~rvr~~L~e~~~~g~kgi~ye~~~v~~~~~e~~~~~~~~~nP----------~gkVPvL~~~  107 (288)
T 3c8e_A           45 LQLYSL-GTPN------GQKVTIMLEELLALGVTGAEYDAWLIRIGDGDQFSSGFVEVNP----------NSKIPALRDH  107 (288)
T ss_dssp             EEEEEC-SSHH------HHHHHHHHHHHHHTTCGGGCEEEEECCGGGTGGGBHHHHHHCT----------TCCSCEEEET
T ss_pred             eEEecC-CCCC------hHHHHHHHHHhhhcccCCCCcEEEEeccccccccCHHHHHhCC----------CCCCCEEEeC
Confidence            356643 4555      99999999988      99999988861111112234444442          2379998876


Q ss_pred             C
Q psy3969          78 E   78 (86)
Q Consensus        78 d   78 (86)
                      |
T Consensus       108 ~  108 (288)
T 3c8e_A          108 T  108 (288)
T ss_dssp             T
T ss_pred             C
Confidence            5

>2dsa_A Glutathione S-transferase; HET: GSH HPX; 2.10A {Burkholderia xenovorans} PDB: 2gdr_A*

Probab=88.86  E-value=0.28  Score=32.25  Aligned_cols=61  Identities=5%  Similarity=0.021  Sum_probs=37.2

Q ss_pred             EEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHh-HHHHHHHhcCCCCCCCCCCCCCCCCeEEe-CCeeee
Q psy3969           5 YKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKEN-EKEFMQQNSKATPSDSTVKSNPLPPQIFN-EEDYCG   82 (86)
Q Consensus         5 ~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~-~r~~M~~~~g~~~~~~~~~~~~tvPQIFi-gd~yiG   82 (86)
                      .+|+...| .      +.+++.+|..+||+|+.+.|+-...++ ...+..+..          +..+||-+-. ||..+.
T Consensus         2 ~Ly~~~~s-~------~~~v~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~~~~----------P~g~vP~L~~~~g~~l~   64 (203)
T 2dsa_A            2 KLYYSPGA-C------SLSPHIALREAGLNFELVQVDLASKKTASGQDYLEVN----------PAGYVPCLQLDDGRTLT   64 (203)
T ss_dssp             EEEECTTS-T------THHHHHHHHHHTCCCEEEEEETTTTEETTCCBGGGTC----------TTCCSCEEECTTSCEEE
T ss_pred             eeeecCCc-c------hHHHHHHHHHcCCCCeEEEEeCCCCcccCCHHHHHhC----------CCCCCCEEEecCCcEEe
Confidence            46776544 3      678999999999999998886211111 112222322          3448998875 555443

>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1

Probab=88.73  E-value=2  Score=25.66  Aligned_cols=61  Identities=10%  Similarity=0.133  Sum_probs=36.9

Q ss_pred             EEEEEcccCchhchHHHHHHHH----HHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEE--eCC
Q psy3969           5 YKISNTVRGVKGVKKRQQRVLM----ILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIF--NEE   78 (86)
Q Consensus         5 ~~y~ss~sgn~~vK~~q~~a~~----lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIF--igd   78 (86)
                      ..|+++-|+.      |.+...    +.+..++.+..+|++...+.+....+.++.+  -+        .+|.++  .+|
T Consensus        34 v~f~a~wC~~------C~~~~p~l~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~--i~--------~~Pt~~~~~~G   97 (118)
T 1zma_A           34 FFIGRKTCPY------CRKFAGTLSGVVAETKAHIYFINSEEPSQLNDLQAFRSRYG--IP--------TVPGFVHITDG   97 (118)
T ss_dssp             EEEECTTCHH------HHHHHHHHHHHHHHHCCCCEEEETTCGGGHHHHHHHHHHHT--CC--------SSCEEEEEETT
T ss_pred             EEEECCCCcc------HHHHHHHHHHHHHhcCCeEEEEECCCcCcHHHHHHHHHHcC--CC--------CCCeEEEEECC
Confidence            4677888888      776544    4444567888899873223244445666665  22        578764  466


Q ss_pred             eee
Q psy3969          79 DYC   81 (86)
Q Consensus        79 ~yi   81 (86)
                      +-+
T Consensus        98 ~~~  100 (118)
T 1zma_A           98 QIN  100 (118)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            543

>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A

Probab=88.67  E-value=1.1  Score=30.01  Aligned_cols=52  Identities=15%  Similarity=0.091  Sum_probs=37.2

Q ss_pred             EEEEcccCchhchHHHHHHHHHHHhC-----CCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCe
Q psy3969           6 KISNTVRGVKGVKKRQQRVLMILDSK-----NIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEED   79 (86)
Q Consensus         6 ~y~ss~sgn~~vK~~q~~a~~lL~~k-----~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~   79 (86)
                      .|+++-|+.      |.+....|+..     +|.|..||++  .+++.    .++.+  -+        .+|.++++|+
T Consensus       142 ~F~a~wC~~------C~~~~~~~~~~~~~~~~v~~~~vd~~--~~~~l----~~~~~--v~--------~~Pt~~~~G~  198 (229)
T 2ywm_A          142 VFVTTSCGY------CPSAAVMAWDFALANDYITSKVIDAS--ENQDL----AEQFQ--VV--------GVPKIVINKG  198 (229)
T ss_dssp             EEECTTCTT------HHHHHHHHHHHHHHCTTEEEEEEEGG--GCHHH----HHHTT--CC--------SSSEEEEGGG
T ss_pred             EEECCCCcc------hHHHHHHHHHHHHHCCCeEEEEEECC--CCHHH----HHHcC--Cc--------ccCEEEECCE
Confidence            489999998      77777666652     7899999998  56553    33344  22        5899999766

>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A

Probab=88.67  E-value=2.4  Score=25.47  Aligned_cols=55  Identities=13%  Similarity=0.145  Sum_probs=34.3

Q ss_pred             EEEEEcccCchhchHHHHHHHHHHHh------CCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEe--
Q psy3969           5 YKISNTVRGVKGVKKRQQRVLMILDS------KNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFN--   76 (86)
Q Consensus         5 ~~y~ss~sgn~~vK~~q~~a~~lL~~------k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFi--   76 (86)
                      ..|+++-|+.      |++....|+.      .++.|-.||++  .+++    +.++.+  -+        .+|.+++  
T Consensus        36 v~f~a~~C~~------C~~~~~~l~~~~~~~~~~v~~~~vd~d--~~~~----l~~~~~--v~--------~~Pt~~~~~   93 (119)
T 1w4v_A           36 VDFHAQWCGP------CKILGPRLEKMVAKQHGKVVMAKVDID--DHTD----LAIEYE--VS--------AVPTVLAMK   93 (119)
T ss_dssp             EEEECTTCHH------HHHHHHHHHHHHHHTTTSSEEEEEETT--TTHH----HHHHTT--CC--------SSSEEEEEE
T ss_pred             EEEECCCCHH------HHHHHHHHHHHHHHhcCCeEEEEEeCC--CCHH----HHHHcC--CC--------cccEEEEEe
Confidence            4567777777      6665554443      35889999987  5554    333444  22        5788777  


Q ss_pred             CCeee
Q psy3969          77 EEDYC   81 (86)
Q Consensus        77 gd~yi   81 (86)
                      +|+.+
T Consensus        94 ~G~~~   98 (119)
T 1w4v_A           94 NGDVV   98 (119)
T ss_dssp             TTEEE
T ss_pred             CCcEE
Confidence            77654

>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A

Probab=88.60  E-value=2.1  Score=24.16  Aligned_cols=56  Identities=4%  Similarity=0.030  Sum_probs=35.0

Q ss_pred             EEEEEcccCchhchHHHHHHHHHHHh-----CCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEe--C
Q psy3969           5 YKISNTVRGVKGVKKRQQRVLMILDS-----KNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFN--E   77 (86)
Q Consensus         5 ~~y~ss~sgn~~vK~~q~~a~~lL~~-----k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFi--g   77 (86)
                      ..|+++-|+.      |.++...|+.     .++.|-.+|++  .+++    +.++.+  -+        .+|.+++  +
T Consensus        21 v~f~~~~C~~------C~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~----~~~~~~--v~--------~~Pt~~~~~~   78 (104)
T 2e0q_A           21 VDFWAEWCAP------CLILAPIIEELAEDYPQVGFGKLNSD--ENPD----IAARYG--VM--------SLPTVIFFKD   78 (104)
T ss_dssp             EEEECTTCHH------HHHHHHHHHHHHHHCTTSEEEEEETT--TCHH----HHHHTT--CC--------SSCEEEEEET
T ss_pred             EEEECCCChh------HHHHhHHHHHHHHHcCCceEEEEECC--CCHH----HHHhCC--cc--------ccCEEEEEEC
Confidence            3466666776      6666655543     35899999998  5654    333444  22        5788887  7


Q ss_pred             Ceeee
Q psy3969          78 EDYCG   82 (86)
Q Consensus        78 d~yiG   82 (86)
                      |+.++
T Consensus        79 g~~~~   83 (104)
T 2e0q_A           79 GEPVD   83 (104)
T ss_dssp             TEEEE
T ss_pred             CeEhh
Confidence            76543

>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1

Probab=88.39  E-value=1.9  Score=26.75  Aligned_cols=55  Identities=5%  Similarity=0.067  Sum_probs=35.3

Q ss_pred             EEEEEcccCchhchHHHHHHHHHHHh-----CCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEe--C
Q psy3969           5 YKISNTVRGVKGVKKRQQRVLMILDS-----KNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFN--E   77 (86)
Q Consensus         5 ~~y~ss~sgn~~vK~~q~~a~~lL~~-----k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFi--g   77 (86)
                      ..|+++-|+.      |.+....|+.     .++.|-.||++  .+++.    .++.+  -+        .+|.+++  +
T Consensus        42 v~F~a~wC~~------C~~~~p~l~~l~~~~~~v~~~~vd~d--~~~~l----~~~~~--v~--------~~Pt~~i~~~   99 (125)
T 1r26_A           42 AWFTAVWCGP------CKTIERPMEKIAYEFPTVKFAKVDAD--NNSEI----VSKCR--VL--------QLPTFIIARS   99 (125)
T ss_dssp             EEEECTTCHH------HHHTHHHHHHHHHHCTTSEEEEEETT--TCHHH----HHHTT--CC--------SSSEEEEEET
T ss_pred             EEEECCcCHh------HHHHHHHHHHHHHHCCCCEEEEEECC--CCHHH----HHHcC--CC--------cccEEEEEeC
Confidence            4567777777      6666555544     47999999998  56553    33334  22        5788776  7


Q ss_pred             Ceee
Q psy3969          78 EDYC   81 (86)
Q Consensus        78 d~yi   81 (86)
                      |+.+
T Consensus       100 G~~~  103 (125)
T 1r26_A          100 GKML  103 (125)
T ss_dssp             TEEE
T ss_pred             CeEE
Confidence            7654

>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A

Probab=87.79  E-value=2.3  Score=24.28  Aligned_cols=55  Identities=7%  Similarity=0.035  Sum_probs=33.6

Q ss_pred             EEEEEcccCchhchHHHHHHHHHHHh------CCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEe--
Q psy3969           5 YKISNTVRGVKGVKKRQQRVLMILDS------KNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFN--   76 (86)
Q Consensus         5 ~~y~ss~sgn~~vK~~q~~a~~lL~~------k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFi--   76 (86)
                      ..|+++-|+.      |++....|+.      .++.|-.+|++  .+++    +.++.+  -+        .+|.+++  
T Consensus        23 v~f~~~~C~~------C~~~~~~l~~~~~~~~~~~~~~~v~~~--~~~~----~~~~~~--v~--------~~Pt~~~~~   80 (109)
T 2yzu_A           23 VDFWAEWCAP------CRMIAPILEEIAKEYEGKLLVAKLDVD--ENPK----TAMRYR--VM--------SIPTVILFK   80 (109)
T ss_dssp             EEEECTTCHH------HHHHHHHHHHHHHHTBTTBEEEEEETT--TCHH----HHHHTT--CC--------SSSEEEEEE
T ss_pred             EEEECCCCHH------HHHhhHHHHHHHHHhhCceEEEEEECC--CCHh----HHHhCC--CC--------cCCEEEEEe
Confidence            3566777777      6555544443      25888899998  5654    333444  22        5788777  


Q ss_pred             CCeee
Q psy3969          77 EEDYC   81 (86)
Q Consensus        77 gd~yi   81 (86)
                      +|+.+
T Consensus        81 ~g~~~   85 (109)
T 2yzu_A           81 DGQPV   85 (109)
T ss_dssp             TTEEE
T ss_pred             CCcEe
Confidence            77654

>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A

Probab=87.51  E-value=2.1  Score=27.15  Aligned_cols=55  Identities=5%  Similarity=0.070  Sum_probs=36.0

Q ss_pred             EEEEEcccCchhchHHHHHHHHHHHh-----CCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEe--C
Q psy3969           5 YKISNTVRGVKGVKKRQQRVLMILDS-----KNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFN--E   77 (86)
Q Consensus         5 ~~y~ss~sgn~~vK~~q~~a~~lL~~-----k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFi--g   77 (86)
                      ..||++-|+.      |.+....|+.     .+|.|-.||++  .+++.    .++.+  -+        .+|.+++  +
T Consensus        37 v~F~a~wC~~------C~~~~p~l~~l~~~~~~v~~~~vd~~--~~~~l----~~~~~--v~--------~~Pt~~~~~~   94 (153)
T 2wz9_A           37 VHFWAPWAPQ------CAQMNEVMAELAKELPQVSFVKLEAE--GVPEV----SEKYE--IS--------SVPTFLFFKN   94 (153)
T ss_dssp             EEEECTTCHH------HHHHHHHHHHHHHHCTTSEEEEEETT--TSHHH----HHHTT--CC--------SSSEEEEEET
T ss_pred             EEEECCCCHh------HHHHHHHHHHHHHHcCCeEEEEEECC--CCHHH----HHHcC--CC--------CCCEEEEEEC
Confidence            4577777877      7766665554     37999999998  55543    33344  22        5788766  7


Q ss_pred             Ceee
Q psy3969          78 EDYC   81 (86)
Q Consensus        78 d~yi   81 (86)
                      |+.+
T Consensus        95 G~~~   98 (153)
T 2wz9_A           95 SQKI   98 (153)
T ss_dssp             TEEE
T ss_pred             CEEE
Confidence            7654

>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1

Probab=87.49  E-value=2.1  Score=23.41  Aligned_cols=57  Identities=14%  Similarity=-0.019  Sum_probs=33.1

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHH----HHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEe
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMI----LDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFN   76 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~l----L~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFi   76 (86)
                      |.++.+ |++-|+.      |.++...    .+..+..++.+.|+   +++    ..++.|  -+        .+|.+++
T Consensus         1 m~~v~f-~a~wC~~------C~~~~~~l~~~~~~~~~~~~~~~v~---~~~----~~~~~~--v~--------~~Pt~~~   56 (77)
T 1ilo_A            1 MMKIQI-YGTGCAN------CQMLEKNAREAVKELGIDAEFEKIK---EMD----QILEAG--LT--------ALPGLAV   56 (77)
T ss_dssp             CEEEEE-ECSSSST------THHHHHHHHHHHHHTTCCEEEEEEC---SHH----HHHHHT--CS--------SSSCEEE
T ss_pred             CcEEEE-EcCCChh------HHHHHHHHHHHHHHcCCceEEEEec---CHH----HHHHCC--CC--------cCCEEEE
Confidence            555554 4567777      5555444    44456667777775   333    233334  22        5789888


Q ss_pred             CCeee
Q psy3969          77 EEDYC   81 (86)
Q Consensus        77 gd~yi   81 (86)
                      +|+.+
T Consensus        57 ~G~~~   61 (77)
T 1ilo_A           57 DGELK   61 (77)
T ss_dssp             TTEEE
T ss_pred             CCEEE
Confidence            88764

>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}

Probab=87.46  E-value=1.7  Score=28.48  Aligned_cols=38  Identities=11%  Similarity=0.002  Sum_probs=28.4

Q ss_pred             CcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccC
Q psy3969           3 KPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITE   42 (86)
Q Consensus         3 ~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~   42 (86)
                      |+.|+|.|.+||++  +=-+.+..-|.+.|++.+.+|+++
T Consensus         2 kv~IvY~S~tGnT~--~~A~~ia~~l~~~g~~v~~~~~~~   39 (161)
T 3hly_A            2 SVLIGYLSDYGYSD--RLSQAIGRGLVKTGVAVEMVDLRA   39 (161)
T ss_dssp             CEEEEECTTSTTHH--HHHHHHHHHHHHTTCCEEEEETTT
T ss_pred             EEEEEEECCChHHH--HHHHHHHHHHHhCCCeEEEEECCC
Confidence            57788888999943  334455566778899999999973

>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}

Probab=87.45  E-value=2.4  Score=24.33  Aligned_cols=56  Identities=7%  Similarity=0.043  Sum_probs=34.4

Q ss_pred             EEEEEcccCchhchHHHHHHHHHHHh------CCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEe--
Q psy3969           5 YKISNTVRGVKGVKKRQQRVLMILDS------KNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFN--   76 (86)
Q Consensus         5 ~~y~ss~sgn~~vK~~q~~a~~lL~~------k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFi--   76 (86)
                      ..|+++-|+.      |.+....|+.      .++.|-.||++  .+++    +.++.+  -+        .+|.+++  
T Consensus        25 v~f~~~~C~~------C~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~----~~~~~~--v~--------~~Pt~~~~~   82 (107)
T 2i4a_A           25 VDFWAEWCGP------CKMIGPALGEIGKEFAGKVTVAKVNID--DNPE----TPNAYQ--VR--------SIPTLMLVR   82 (107)
T ss_dssp             EEEECTTCHH------HHHHHHHHHHHHHHHTTSEEEEEEETT--TCCH----HHHHTT--CC--------SSSEEEEEE
T ss_pred             EEEECCCChh------HHHHhHHHHHHHHHhCCcEEEEEEECC--CCHH----HHHhcC--CC--------ccCEEEEEe
Confidence            3466776776      6655554443      36889999998  5554    333334  22        5788877  


Q ss_pred             CCeeee
Q psy3969          77 EEDYCG   82 (86)
Q Consensus        77 gd~yiG   82 (86)
                      +|+.++
T Consensus        83 ~G~~~~   88 (107)
T 2i4a_A           83 DGKVID   88 (107)
T ss_dssp             TTEEEE
T ss_pred             CCEEEE
Confidence            777653

>1ykg_A SIR-FP, sulfite reductase [NADPH] flavoprotein alpha- component; electron transport; HET: FMN; NMR {Escherichia coli} SCOP: c.23.5.2

Probab=87.02  E-value=0.82  Score=30.09  Aligned_cols=39  Identities=13%  Similarity=0.086  Sum_probs=26.6

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEcc
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDIT   41 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~   41 (86)
                      |.++.|+|.|.+||.+  +=.+++..-|...|++.+.+|+.
T Consensus         9 ~~ki~I~Y~S~tGnT~--~~A~~ia~~l~~~g~~v~~~~~~   47 (167)
T 1ykg_A            9 MPGITIISASQTGNAR--RVAEALRDDLLAAKLNVKLVNAG   47 (167)
T ss_dssp             ---CEEEEECSSSHHH--HHHHHHHHHHHHHTCCCEEEEGG
T ss_pred             CCeEEEEEECCchHHH--HHHHHHHHHHHHCCCceEEeehh
Confidence            6789999999999963  33444455566778888888876

>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A

Probab=86.91  E-value=2.6  Score=24.65  Aligned_cols=55  Identities=5%  Similarity=0.104  Sum_probs=34.3

Q ss_pred             EEEEEcccCchhchHHHHHHHHHHHh-----CCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEe--C
Q psy3969           5 YKISNTVRGVKGVKKRQQRVLMILDS-----KNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFN--E   77 (86)
Q Consensus         5 ~~y~ss~sgn~~vK~~q~~a~~lL~~-----k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFi--g   77 (86)
                      ..|+++-|+.      |.+....|+.     .++.|-.+|++  .+++.    .++.+  -+        .+|.+++  +
T Consensus        33 v~f~~~~C~~------C~~~~~~l~~~~~~~~~~~~~~v~~~--~~~~~----~~~~~--v~--------~~Pt~~~~~~   90 (118)
T 2vm1_A           33 IDFTASWCGP------CRVIAPVFAEYAKKFPGAIFLKVDVD--ELKDV----AEAYN--VE--------AMPTFLFIKD   90 (118)
T ss_dssp             EEEECTTCHH------HHHHHHHHHHHHHHCTTSEEEEEETT--TSHHH----HHHTT--CC--------SBSEEEEEET
T ss_pred             EEEECCCCHh------HHHHhHHHHHHHHHCCCcEEEEEEcc--cCHHH----HHHcC--CC--------cCcEEEEEeC
Confidence            3467777777      7666655554     27889999997  55543    33344  22        5788766  7


Q ss_pred             Ceee
Q psy3969          78 EDYC   81 (86)
Q Consensus        78 d~yi   81 (86)
                      |+.+
T Consensus        91 g~~~   94 (118)
T 2vm1_A           91 GEKV   94 (118)
T ss_dssp             TEEE
T ss_pred             CeEE
Confidence            7654

>2hna_A Protein MIOC, flavodoxin; alpha-beta sandwich, flavodoxin fold, electron transport; NMR {Escherichia coli} PDB: 2hnb_A

Probab=86.82  E-value=0.85  Score=29.11  Aligned_cols=38  Identities=13%  Similarity=0.045  Sum_probs=27.3

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEc
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDI   40 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI   40 (86)
                      |.|+.|+|.|.+||.+  +=.+++..-|.+.|++.+.+|.
T Consensus         1 M~ki~I~Y~S~tGnT~--~~A~~ia~~l~~~g~~v~~~~~   38 (147)
T 2hna_A            1 MADITLISGSTLGGAE--YVAEHLAEKLEEAGFTTETLHG   38 (147)
T ss_dssp             CCSEEEECCTTSCCCH--HHHHHHHHHHHHTTCCEEEECC
T ss_pred             CCeEEEEEECCchHHH--HHHHHHHHHHHHCCCceEEecC
Confidence            8899999999999954  3334445556777887666654

>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A

Probab=86.78  E-value=3  Score=23.92  Aligned_cols=55  Identities=5%  Similarity=0.030  Sum_probs=34.3

Q ss_pred             EEEEEcccCchhchHHHHHHHHHHHh------CCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEe--
Q psy3969           5 YKISNTVRGVKGVKKRQQRVLMILDS------KNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFN--   76 (86)
Q Consensus         5 ~~y~ss~sgn~~vK~~q~~a~~lL~~------k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFi--   76 (86)
                      ..|+++-|+.      |.+....|+.      ..+.|-.+|++  .+++    +.++.+  -+        .+|.+++  
T Consensus        22 v~f~~~~C~~------C~~~~~~l~~~~~~~~~~v~~~~v~~~--~~~~----~~~~~~--v~--------~~Pt~~~~~   79 (105)
T 1nsw_A           22 VDFWAAWCGP------CRMMAPVLEEFAEAHADKVTVAKLNVD--ENPE----TTSQFG--IM--------SIPTLILFK   79 (105)
T ss_dssp             EEEECTTCHH------HHHHHHHHHHHHHHSTTTCEEEEEETT--TCHH----HHHHTT--CC--------SSSEEEEEE
T ss_pred             EEEECCCCHH------HHHHHHHHHHHHHHhcCCcEEEEEECc--CCHH----HHHHcC--Cc--------cccEEEEEe
Confidence            4567777777      6666555543      24888889987  5554    334444  22        5788877  


Q ss_pred             CCeee
Q psy3969          77 EEDYC   81 (86)
Q Consensus        77 gd~yi   81 (86)
                      +|+.+
T Consensus        80 ~G~~~   84 (105)
T 1nsw_A           80 GGRPV   84 (105)
T ss_dssp             TTEEE
T ss_pred             CCeEE
Confidence            77643

>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A

Probab=86.78  E-value=2.1  Score=25.44  Aligned_cols=60  Identities=7%  Similarity=0.065  Sum_probs=33.5

Q ss_pred             EEEEEcccCchh-chHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEe--CCeee
Q psy3969           5 YKISNTVRGVKG-VKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFN--EEDYC   81 (86)
Q Consensus         5 ~~y~ss~sgn~~-vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFi--gd~yi   81 (86)
                      ..|+++-|+..+ +...-.++..-+. .++.|-.||++  .+++.    .++.+  -+        .+|.+++  +|+.+
T Consensus        22 v~f~a~wC~~C~~~~~~l~~~~~~~~-~~v~~~~vd~~--~~~~l----~~~~~--v~--------~~Pt~~~~~~G~~~   84 (112)
T 2voc_A           22 ADFWAPWCGPSKMIAPVLEELDQEMG-DKLKIVKIDVD--ENQET----AGKYG--VM--------SIPTLLVLKDGEVV   84 (112)
T ss_dssp             EEEECTTBGGGGGHHHHHHHHHHHHT-TTCEEEEEETT--TCCSH----HHHTT--CC--------SBSEEEEEETTEEE
T ss_pred             EEEECCCCHHHHHHHHHHHHHHHHhC-CCcEEEEEECC--CCHHH----HHHcC--CC--------cccEEEEEeCCEEE
Confidence            356777777732 2222222222222 36999999998  55543    33334  22        5788877  77754

>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A

Probab=86.56  E-value=3.1  Score=23.78  Aligned_cols=55  Identities=15%  Similarity=0.042  Sum_probs=33.4

Q ss_pred             EEEEEcccCchhchHHHHHHHHHHHh------CCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEe--
Q psy3969           5 YKISNTVRGVKGVKKRQQRVLMILDS------KNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFN--   76 (86)
Q Consensus         5 ~~y~ss~sgn~~vK~~q~~a~~lL~~------k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFi--   76 (86)
                      ..|+++-|+.      |.++...|+.      .++.|-.+|++  .+++    +.++.+  -+        .+|.+++  
T Consensus        25 v~f~~~~C~~------C~~~~~~l~~~~~~~~~~~~~~~v~~~--~~~~----~~~~~~--v~--------~~Pt~~~~~   82 (106)
T 1xwb_A           25 LDFFATWCGP------CKMISPKLVELSTQFADNVVVLKVDVD--ECED----IAMEYN--IS--------SMPTFVFLK   82 (106)
T ss_dssp             EEEECTTCHH------HHHHHHHHHHHHHHTTTTEEEEEEETT--TCHH----HHHHTT--CC--------SSSEEEEEE
T ss_pred             EEEECCcCHH------HHHhhHHHHHHHHHhCCCeEEEEEecc--chHH----HHHHcC--CC--------cccEEEEEc
Confidence            3466776776      6665555544      47888888887  5554    333344  22        4677765  


Q ss_pred             CCeee
Q psy3969          77 EEDYC   81 (86)
Q Consensus        77 gd~yi   81 (86)
                      +|+.+
T Consensus        83 ~G~~~   87 (106)
T 1xwb_A           83 NGVKV   87 (106)
T ss_dssp             TTEEE
T ss_pred             CCcEE
Confidence            66654

>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1

Probab=86.37  E-value=3.3  Score=23.99  Aligned_cols=56  Identities=11%  Similarity=0.037  Sum_probs=35.2

Q ss_pred             EEEEEcccCchhchHHHHHHHHHHHh------CCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEe--
Q psy3969           5 YKISNTVRGVKGVKKRQQRVLMILDS------KNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFN--   76 (86)
Q Consensus         5 ~~y~ss~sgn~~vK~~q~~a~~lL~~------k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFi--   76 (86)
                      ..|+++-|+.      |++....|+.      .++.|-.||++  .+++    +.++.+  -+        .+|.+++  
T Consensus        30 v~f~~~~C~~------C~~~~~~l~~~~~~~~~~v~~~~v~~~--~~~~----~~~~~~--v~--------~~Pt~~~~~   87 (115)
T 1thx_A           30 VYFWASWCGP------CQLMSPLINLAANTYSDRLKVVKLEID--PNPT----TVKKYK--VE--------GVPALRLVK   87 (115)
T ss_dssp             EEEECTTCTT------HHHHHHHHHHHHHHTTTTCEEEEEEST--TCHH----HHHHTT--CC--------SSSEEEEEE
T ss_pred             EEEECCCCHH------HHHhHHHHHHHHHHhCCcEEEEEEEcC--CCHH----HHHHcC--CC--------ceeEEEEEc
Confidence            4567777887      6655554443      24899999998  5654    333444  22        5788877  


Q ss_pred             CCeeee
Q psy3969          77 EEDYCG   82 (86)
Q Consensus        77 gd~yiG   82 (86)
                      +|+.++
T Consensus        88 ~G~~~~   93 (115)
T 1thx_A           88 GEQILD   93 (115)
T ss_dssp             TTEEEE
T ss_pred             CCEEEE
Confidence            776543

>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}

Probab=86.03  E-value=2.9  Score=25.34  Aligned_cols=35  Identities=29%  Similarity=0.340  Sum_probs=25.7

Q ss_pred             EEEEEcccCchhchHHHHHHHHHHHh-----CCCceEEEEccCCCCHh
Q psy3969           5 YKISNTVRGVKGVKKRQQRVLMILDS-----KNIDYTVIDITEPGKEN   47 (86)
Q Consensus         5 ~~y~ss~sgn~~vK~~q~~a~~lL~~-----k~I~f~eiDI~~~~d~~   47 (86)
                      ..|+++-|+.      |.+....|+.     .++.|-.||++  .+++
T Consensus        28 v~f~a~wC~~------C~~~~~~l~~l~~~~~~v~~~~vd~~--~~~~   67 (118)
T 2f51_A           28 VDFFATWCGP------CQRLGQILPSIAEANKDVTFIKVDVD--KNGN   67 (118)
T ss_dssp             EEEECTTCHH------HHHHHHHHHHHHHHCTTSEEEEEETT--TCHH
T ss_pred             EEEECCCCHH------HHHHHHHHHHHHHHCCCeEEEEEECC--CCHH
Confidence            4577777877      7766666555     68999999998  5654

>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1

Probab=85.99  E-value=1.9  Score=25.12  Aligned_cols=37  Identities=11%  Similarity=0.159  Sum_probs=23.9

Q ss_pred             EEEEcccCchhchHHHHHHHHHHHh-----CCCceEEEEccCCCCHhHHH
Q psy3969           6 KISNTVRGVKGVKKRQQRVLMILDS-----KNIDYTVIDITEPGKENEKE   50 (86)
Q Consensus         6 ~y~ss~sgn~~vK~~q~~a~~lL~~-----k~I~f~eiDI~~~~d~~~r~   50 (86)
                      .|+++-|+.      |.+....|+.     .++.|-.||++  .+++..+
T Consensus        32 ~f~~~~C~~------C~~~~~~l~~~~~~~~~v~~~~v~~~--~~~~~~~   73 (113)
T 1ti3_A           32 DFTASWCPP------CKMIAPIFAELAKKFPNVTFLKVDVD--ELKAVAE   73 (113)
T ss_dssp             EEECSSCHH------HHHHHHHHHHHHHHCSSEEEEEEETT--TCHHHHH
T ss_pred             EEECCCCHH------HHHHHHHHHHHHHhCCCcEEEEEEcc--ccHHHHH
Confidence            466776777      6666554443     26888899988  5655433

>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}

Probab=85.86  E-value=3.3  Score=23.53  Aligned_cols=54  Identities=7%  Similarity=0.163  Sum_probs=33.8

Q ss_pred             EEEEcccCchhchHHHHHHHHHHHh-----CCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEe--CC
Q psy3969           6 KISNTVRGVKGVKKRQQRVLMILDS-----KNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFN--EE   78 (86)
Q Consensus         6 ~y~ss~sgn~~vK~~q~~a~~lL~~-----k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFi--gd   78 (86)
                      .|+++-|+.      |.+....|+.     .++.|-.+|++  .+++.    .++.+  -+        .+|.+++  +|
T Consensus        25 ~f~~~~C~~------C~~~~~~l~~~~~~~~~~~~~~v~~~--~~~~~----~~~~~--v~--------~~Pt~~~~~~g   82 (104)
T 2vim_A           25 DFFAQWCGP------CRNIAPKVEALAKEIPEVEFAKVDVD--QNEEA----AAKYS--VT--------AMPTFVFIKDG   82 (104)
T ss_dssp             EEECTTCHH------HHHHHHHHHHHHHHCTTSEEEEEETT--TCHHH----HHHTT--CC--------SSSEEEEEETT
T ss_pred             EEECCCCHH------HHHhhHHHHHHHHHCCCCEEEEEecc--CCHHH----HHHcC--Cc--------cccEEEEEeCC
Confidence            467777777      6666655544     37999999998  55543    33344  22        4677665  66


Q ss_pred             eee
Q psy3969          79 DYC   81 (86)
Q Consensus        79 ~yi   81 (86)
                      +.+
T Consensus        83 ~~~   85 (104)
T 2vim_A           83 KEV   85 (104)
T ss_dssp             EEE
T ss_pred             cEE
Confidence            554

>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A

Probab=85.11  E-value=3.7  Score=24.33  Aligned_cols=55  Identities=11%  Similarity=0.131  Sum_probs=34.7

Q ss_pred             EEEEEcccCchhchHHHHHHHHHHHhC----CCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEe--CC
Q psy3969           5 YKISNTVRGVKGVKKRQQRVLMILDSK----NIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFN--EE   78 (86)
Q Consensus         5 ~~y~ss~sgn~~vK~~q~~a~~lL~~k----~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFi--gd   78 (86)
                      ..|+++-|+.      |.++...|+..    ++.|-.||++  .+++    +.++.+  -+        .+|.+++  +|
T Consensus        38 v~f~a~wC~~------C~~~~~~~~~~~~~~~~~~~~vd~~--~~~~----~~~~~~--v~--------~~Pt~~~~~~G   95 (117)
T 2xc2_A           38 VDFFATWCGP------CKTIAPLFKELSEKYDAIFVKVDVD--KLEE----TARKYN--IS--------AMPTFIAIKNG   95 (117)
T ss_dssp             EEEECTTCHH------HHHHHHHHHHHHTTSSSEEEEEETT--TSHH----HHHHTT--CC--------SSSEEEEEETT
T ss_pred             EEEECCCCHh------HHHHhHHHHHHHHHcCcEEEEEECC--ccHH----HHHHcC--CC--------ccceEEEEeCC
Confidence            3567777777      77766666542    7888888887  5554    333344  22        5788766  66


Q ss_pred             eee
Q psy3969          79 DYC   81 (86)
Q Consensus        79 ~yi   81 (86)
                      +.+
T Consensus        96 ~~~   98 (117)
T 2xc2_A           96 EKV   98 (117)
T ss_dssp             EEE
T ss_pred             cEE
Confidence            654

>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A

Probab=85.10  E-value=3  Score=25.75  Aligned_cols=45  Identities=2%  Similarity=-0.035  Sum_probs=27.9

Q ss_pred             EEEEEcccCchhchHHHHHHHHHH-------Hh-CCCceEEEEccCCCCHhHHHHHHHhcC
Q psy3969           5 YKISNTVRGVKGVKKRQQRVLMIL-------DS-KNIDYTVIDITEPGKENEKEFMQQNSK   57 (86)
Q Consensus         5 ~~y~ss~sgn~~vK~~q~~a~~lL-------~~-k~I~f~eiDI~~~~d~~~r~~M~~~~g   57 (86)
                      ..||++-|+.      |.+....|       +. +++.+-.||++  .+.+....+.++.+
T Consensus        36 v~F~a~wC~~------C~~~~~~~~~~~~l~~~~~~~~~~~vd~~--~~~~~~~~l~~~~~   88 (134)
T 2fwh_A           36 LDLYADWCVA------CKEFEKYTFSDPQVQKALADTVLLQANVT--ANDAQDVALLKHLN   88 (134)
T ss_dssp             EEEECTTCHH------HHHHHHHTTTSHHHHHHTTTSEEEEEECT--TCCHHHHHHHHHTT
T ss_pred             EEEECCCCHH------HHHHHHHhcCCHHHHHHhcCcEEEEEeCC--CCcchHHHHHHHcC
Confidence            4567887888      55543222       22 46889999997  44455555666665

>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...

Probab=84.87  E-value=3.9  Score=23.57  Aligned_cols=55  Identities=11%  Similarity=0.089  Sum_probs=33.9

Q ss_pred             EEEEEcccCchhchHHHHHHHHHHHh------CCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEe--
Q psy3969           5 YKISNTVRGVKGVKKRQQRVLMILDS------KNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFN--   76 (86)
Q Consensus         5 ~~y~ss~sgn~~vK~~q~~a~~lL~~------k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFi--   76 (86)
                      ..|+++-|+.      |++....|+.      .++.|-.||++  .+++..    ++.+  -+        .+|.+++  
T Consensus        25 v~f~~~~C~~------C~~~~~~l~~~~~~~~~~~~~~~v~~~--~~~~~~----~~~~--v~--------~~Pt~~~~~   82 (108)
T 2trx_A           25 VDFWAEWCGP------CKMIAPILDEIADEYQGKLTVAKLNID--QNPGTA----PKYG--IR--------GIPTLLLFK   82 (108)
T ss_dssp             EEEECTTCHH------HHHHHHHHHHHHHHTTTTEEEEEEETT--TCTTHH----HHTT--CC--------SSSEEEEEE
T ss_pred             EEEECCCCHh------HHHHHHHHHHHHHHhCCCcEEEEEECC--CCHHHH----HHcC--Cc--------ccCEEEEEe
Confidence            4567777777      6666555543      25888889988  555433    3334  22        5788877  


Q ss_pred             CCeee
Q psy3969          77 EEDYC   81 (86)
Q Consensus        77 gd~yi   81 (86)
                      +|+.+
T Consensus        83 ~G~~~   87 (108)
T 2trx_A           83 NGEVA   87 (108)
T ss_dssp             TTEEE
T ss_pred             CCEEE
Confidence            76653

>3fni_A Putative diflavin flavoprotein A 3; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.30A {Nostoc SP} PDB: 2klb_A

Probab=84.86  E-value=2  Score=28.31  Aligned_cols=38  Identities=11%  Similarity=0.109  Sum_probs=28.9

Q ss_pred             CcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccC
Q psy3969           3 KPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITE   42 (86)
Q Consensus         3 ~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~   42 (86)
                      ++.|+|.|.+||++  +=.+.+..-|.+.|++.+.+|+++
T Consensus         6 kv~IvY~S~~GnT~--~iA~~ia~~l~~~g~~v~~~~~~~   43 (159)
T 3fni_A            6 SIGVFYVSEYGYSD--RLAQAIINGITKTGVGVDVVDLGA   43 (159)
T ss_dssp             EEEEEECTTSTTHH--HHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             EEEEEEECCChHHH--HHHHHHHHHHHHCCCeEEEEECcC
Confidence            57789999999953  334455566778899999999983

>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1

Probab=84.79  E-value=3.5  Score=24.62  Aligned_cols=57  Identities=9%  Similarity=0.129  Sum_probs=34.6

Q ss_pred             EEEEEcccCchhchHHHHHHHHHHHh-----CCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEe--C
Q psy3969           5 YKISNTVRGVKGVKKRQQRVLMILDS-----KNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFN--E   77 (86)
Q Consensus         5 ~~y~ss~sgn~~vK~~q~~a~~lL~~-----k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFi--g   77 (86)
                      ..|+++-|+.      |++....|+.     .++.|-.+|+++ .+++    +.++.+  -+        .+|.+++  +
T Consensus        42 v~f~a~wC~~------C~~~~~~l~~~~~~~~~~~~~~vd~~~-~~~~----~~~~~~--v~--------~~Pt~~~~~~  100 (124)
T 1faa_A           42 LDMFTQWCGP------CKAMAPKYEKLAEEYLDVIFLKLDCNQ-ENKT----LAKELG--IR--------VVPTFKILKE  100 (124)
T ss_dssp             EEEECTTCHH------HHHHHHHHHHHHHHCTTSEEEEEECSS-TTHH----HHHHHC--CS--------SSSEEEEEET
T ss_pred             EEEECCcCHh------HHHHhHHHHHHHHHCCCCEEEEEecCc-chHH----HHHHcC--CC--------eeeEEEEEeC
Confidence            4567777877      7666665544     468899999862 2332    333344  22        5778665  7


Q ss_pred             Ceeee
Q psy3969          78 EDYCG   82 (86)
Q Consensus        78 d~yiG   82 (86)
                      |+.++
T Consensus       101 G~~~~  105 (124)
T 1faa_A          101 NSVVG  105 (124)
T ss_dssp             TEEEE
T ss_pred             CcEEE
Confidence            77653

>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B

Probab=84.65  E-value=4.5  Score=23.93  Aligned_cols=55  Identities=13%  Similarity=0.181  Sum_probs=35.4

Q ss_pred             EEEEcccCchhchHHHHHHHHHHHh-----CCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEe--CC
Q psy3969           6 KISNTVRGVKGVKKRQQRVLMILDS-----KNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFN--EE   78 (86)
Q Consensus         6 ~y~ss~sgn~~vK~~q~~a~~lL~~-----k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFi--gd   78 (86)
                      .|+++-|+.      |.+....|+.     .++.|-.||++  .+++.    .++.+  -+        .+|.+++  +|
T Consensus        30 ~f~a~wC~~------C~~~~p~l~~l~~~~~~~~~~~vd~~--~~~~l----~~~~~--v~--------~~Pt~~~~~~G   87 (109)
T 3f3q_A           30 DFYATWCGP------CKMIAPMIEKFSEQYPQADFYKLDVD--ELGDV----AQKNE--VS--------AMPTLLLFKNG   87 (109)
T ss_dssp             EEECTTCHH------HHHHHHHHHHHHHHCTTSEEEEEETT--TCHHH----HHHTT--CC--------SSSEEEEEETT
T ss_pred             EEECCcCHh------HHHHHHHHHHHHHHCCCCEEEEEECC--CCHHH----HHHcC--CC--------ccCEEEEEECC
Confidence            477888887      7766665554     47899999998  56553    33444  22        4677655  67


Q ss_pred             eeee
Q psy3969          79 DYCG   82 (86)
Q Consensus        79 ~yiG   82 (86)
                      +.+.
T Consensus        88 ~~~~   91 (109)
T 3f3q_A           88 KEVA   91 (109)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            6554

>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*

Probab=84.61  E-value=4.5  Score=23.96  Aligned_cols=55  Identities=11%  Similarity=0.100  Sum_probs=34.5

Q ss_pred             EEEEEcccCchhchHHHHHHHHHHHh-----CCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEe--C
Q psy3969           5 YKISNTVRGVKGVKKRQQRVLMILDS-----KNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFN--E   77 (86)
Q Consensus         5 ~~y~ss~sgn~~vK~~q~~a~~lL~~-----k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFi--g   77 (86)
                      ..|+++-|+.      |.+....|+.     .++.|-.||++  .+++.    .++.+  -+        .+|.+++  +
T Consensus        39 v~f~~~~C~~------C~~~~~~l~~~~~~~~~~~~~~vd~~--~~~~~----~~~~~--v~--------~~Pt~~~~~~   96 (122)
T 2vlu_A           39 IDFTASWCGP------CRIMAPVFADLAKKFPNAVFLKVDVD--ELKPI----AEQFS--VE--------AMPTFLFMKE   96 (122)
T ss_dssp             EEEECTTCHH------HHHHHHHHHHHHHHCTTSEEEEEETT--TCHHH----HHHTT--CC--------SSSEEEEEET
T ss_pred             EEEECCCCHH------HHHHHHHHHHHHHHCCCcEEEEEECC--CCHHH----HHHcC--CC--------cccEEEEEeC
Confidence            4567777777      7666665554     35889999998  55543    33444  22        4677665  6


Q ss_pred             Ceee
Q psy3969          78 EDYC   81 (86)
Q Consensus        78 d~yi   81 (86)
                      |+.+
T Consensus        97 G~~~  100 (122)
T 2vlu_A           97 GDVK  100 (122)
T ss_dssp             TEEE
T ss_pred             CEEE
Confidence            7654

>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A

Probab=83.37  E-value=2.9  Score=24.29  Aligned_cols=55  Identities=7%  Similarity=0.109  Sum_probs=32.7

Q ss_pred             EEEEEcccCchhchHHHHHHHHHHHh----C--CCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEe--
Q psy3969           5 YKISNTVRGVKGVKKRQQRVLMILDS----K--NIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFN--   76 (86)
Q Consensus         5 ~~y~ss~sgn~~vK~~q~~a~~lL~~----k--~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFi--   76 (86)
                      ..|+++-|+.      |.+....|+.    .  ++.|-.||++  .+++..    ++.+  -+        .+|.+++  
T Consensus        29 v~f~~~~C~~------C~~~~~~l~~~~~~~~~~~~~~~vd~~--~~~~~~----~~~~--v~--------~~Pt~~~~~   86 (112)
T 1ep7_A           29 VDFTATWCGP------CKMIAPLFETLSNDYAGKVIFLKVDVD--AVAAVA----EAAG--IT--------AMPTFHVYK   86 (112)
T ss_dssp             EEEECTTCHH------HHHHHHHHHHHHHHTTTTSEEEEEETT--TTHHHH----HHHT--CC--------BSSEEEEEE
T ss_pred             EEEECCCCHH------HHHHHHHHHHHHHHcCCCeEEEEEECC--chHHHH----HHcC--CC--------cccEEEEEE
Confidence            3566777776      6655554443    2  6888899987  555433    3333  12        4677665  


Q ss_pred             CCeee
Q psy3969          77 EEDYC   81 (86)
Q Consensus        77 gd~yi   81 (86)
                      +|+.+
T Consensus        87 ~G~~~   91 (112)
T 1ep7_A           87 DGVKA   91 (112)
T ss_dssp             TTEEE
T ss_pred             CCeEE
Confidence            66654

>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1

Probab=83.19  E-value=3.9  Score=25.02  Aligned_cols=55  Identities=9%  Similarity=0.092  Sum_probs=34.4

Q ss_pred             EEEEEcccCchhchHHHHHHHHHHHh-----CCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEe--C
Q psy3969           5 YKISNTVRGVKGVKKRQQRVLMILDS-----KNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFN--E   77 (86)
Q Consensus         5 ~~y~ss~sgn~~vK~~q~~a~~lL~~-----k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFi--g   77 (86)
                      ..|+++-|+.      |.+....|+.     .++.|-.||++  .+++    +.++.+  -+        .+|.+++  +
T Consensus        43 v~f~a~wC~~------C~~~~~~l~~l~~~~~~v~~~~vd~d--~~~~----l~~~~~--v~--------~~Pt~~~~~~  100 (124)
T 1xfl_A           43 VDFTASWCGP------CRFIAPFFADLAKKLPNVLFLKVDTD--ELKS----VASDWA--IQ--------AMPTFMFLKE  100 (124)
T ss_dssp             EEEECTTCHH------HHHHHHHHHHHHHHCSSEEEEEEETT--TSHH----HHHHTT--CC--------SSSEEEEEET
T ss_pred             EEEECCCCHH------HHHHHHHHHHHHHHCCCcEEEEEECc--cCHH----HHHHcC--CC--------ccCEEEEEEC
Confidence            4577777777      7666655554     26888888887  5554    333444  22        5777766  7


Q ss_pred             Ceee
Q psy3969          78 EDYC   81 (86)
Q Consensus        78 d~yi   81 (86)
                      |+.+
T Consensus       101 G~~~  104 (124)
T 1xfl_A          101 GKIL  104 (124)
T ss_dssp             TEEE
T ss_pred             CEEE
Confidence            7654

>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*

Probab=83.15  E-value=4.8  Score=24.14  Aligned_cols=55  Identities=13%  Similarity=0.138  Sum_probs=35.2

Q ss_pred             EEEEEcccCchhchHHHHHHHHHHHh-----CCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEe--C
Q psy3969           5 YKISNTVRGVKGVKKRQQRVLMILDS-----KNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFN--E   77 (86)
Q Consensus         5 ~~y~ss~sgn~~vK~~q~~a~~lL~~-----k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFi--g   77 (86)
                      ..||++-|+.      |.+....|+.     .++.|-.||++  .+++.    .++.+  -+        .+|.+++  +
T Consensus        36 v~F~a~wC~~------C~~~~p~l~~l~~~~~~v~~~~vd~d--~~~~l----~~~~~--v~--------~~Pt~~~~~~   93 (116)
T 3qfa_C           36 VDFSATWCGP------SKMIKPFFHSLSEKYSNVIFLEVDVD--DCQDV----ASECE--VK--------SMPTFQFFKK   93 (116)
T ss_dssp             EEEECTTCHH------HHHHHHHHHHHHTTCTTSEEEEEETT--TTHHH----HHHTT--CC--------SSSEEEEESS
T ss_pred             EEEECCCCHH------HHHHHHHHHHHHHHCCCCEEEEEECC--CCHHH----HHHcC--Cc--------cccEEEEEeC
Confidence            3477888887      7777766665     46888999998  55543    33444  22        4677655  5


Q ss_pred             Ceee
Q psy3969          78 EDYC   81 (86)
Q Consensus        78 d~yi   81 (86)
                      |+.+
T Consensus        94 G~~~   97 (116)
T 3qfa_C           94 GQKV   97 (116)
T ss_dssp             SSEE
T ss_pred             CeEE
Confidence            5544

>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}

Probab=82.99  E-value=5.4  Score=24.51  Aligned_cols=55  Identities=9%  Similarity=0.059  Sum_probs=33.7

Q ss_pred             EEEEEcccCchhchHHHHHHHHHHHh------CCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEe--
Q psy3969           5 YKISNTVRGVKGVKKRQQRVLMILDS------KNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFN--   76 (86)
Q Consensus         5 ~~y~ss~sgn~~vK~~q~~a~~lL~~------k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFi--   76 (86)
                      ..||++-|+.      |......|+.      .++.|-.||++  .+++    +.++.+  -+        .+|.+++  
T Consensus        55 v~f~~~~C~~------C~~~~~~l~~l~~~~~~~v~~~~vd~~--~~~~----l~~~~~--v~--------~~Pt~~~~~  112 (140)
T 1v98_A           55 VDFFAPWCGP------CRLVSPILEELARDHAGRLKVVKVNVD--EHPG----LAARYG--VR--------SVPTLVLFR  112 (140)
T ss_dssp             EEEECTTCHH------HHHHHHHHHHHHHHTTTTEEEEEEETT--TCHH----HHHHTT--CC--------SSSEEEEEE
T ss_pred             EEEECCCCHH------HHHHHHHHHHHHHHccCceEEEEEECC--CCHH----HHHHCC--CC--------ccCEEEEEe
Confidence            4566776776      6665555543      25888999998  5554    333444  22        5788776  


Q ss_pred             CCeee
Q psy3969          77 EEDYC   81 (86)
Q Consensus        77 gd~yi   81 (86)
                      +|+.+
T Consensus       113 ~G~~~  117 (140)
T 1v98_A          113 RGAPV  117 (140)
T ss_dssp             TTEEE
T ss_pred             CCcEE
Confidence            77643

>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*

Probab=82.97  E-value=1.4  Score=29.00  Aligned_cols=39  Identities=5%  Similarity=0.046  Sum_probs=29.7

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEcc
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDIT   41 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~   41 (86)
                      |.|+.|+|.|.+||.  ++=.+.+..-|.+.|++.+.+|+.
T Consensus         5 M~kilii~~S~~g~T--~~la~~i~~~l~~~g~~v~~~~l~   43 (200)
T 2a5l_A            5 SPYILVLYYSRHGAT--AEMARQIARGVEQGGFEARVRTVP   43 (200)
T ss_dssp             CCEEEEEECCSSSHH--HHHHHHHHHHHHHTTCEEEEEBCC
T ss_pred             cceEEEEEeCCCChH--HHHHHHHHHHHhhCCCEEEEEEhh
Confidence            668888888888873  344455666677889999999997

>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A

Probab=82.87  E-value=5.3  Score=23.45  Aligned_cols=55  Identities=13%  Similarity=0.150  Sum_probs=33.8

Q ss_pred             EEEEEcccCchhchHHHHHHHHHHHh------CCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEe--
Q psy3969           5 YKISNTVRGVKGVKKRQQRVLMILDS------KNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFN--   76 (86)
Q Consensus         5 ~~y~ss~sgn~~vK~~q~~a~~lL~~------k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFi--   76 (86)
                      ..|+++-|+.      |++....|+.      .++.|-.||++  .+++.    .++.+  -+        .+|.+++  
T Consensus        35 v~f~~~~C~~------C~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~----~~~~~--i~--------~~Pt~~~~~   92 (121)
T 2i1u_A           35 VDFWATWCGP------CKMVAPVLEEIATERATDLTVAKLDVD--TNPET----ARNFQ--VV--------SIPTLILFK   92 (121)
T ss_dssp             EEEECTTCHH------HHHHHHHHHHHHHHTTTTCEEEEEETT--TCHHH----HHHTT--CC--------SSSEEEEEE
T ss_pred             EEEECCCCHH------HHHHHHHHHHHHHHhcCCeEEEEEECC--CCHHH----HHhcC--CC--------cCCEEEEEE
Confidence            4566777776      6666555543      36889999998  55543    33344  22        5677766  


Q ss_pred             CCeee
Q psy3969          77 EEDYC   81 (86)
Q Consensus        77 gd~yi   81 (86)
                      +|+.+
T Consensus        93 ~g~~~   97 (121)
T 2i1u_A           93 DGQPV   97 (121)
T ss_dssp             TTEEE
T ss_pred             CCEEE
Confidence            66543

>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}

Probab=82.86  E-value=3.7  Score=26.62  Aligned_cols=58  Identities=7%  Similarity=0.187  Sum_probs=38.2

Q ss_pred             EEEcccCchhchHHHHHHHHHHH----hCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEe--CCee
Q psy3969           7 ISNTVRGVKGVKKRQQRVLMILD----SKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFN--EEDY   80 (86)
Q Consensus         7 y~ss~sgn~~vK~~q~~a~~lL~----~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFi--gd~y   80 (86)
                      +.|+-||-      |..|...|+    ...++|-.+||.  .+++.=.+.-++.|  -+       .-.||+++  ||+-
T Consensus        31 khatwCgp------c~~~~~~~e~~~~~~~v~~~~vdVd--e~r~~Sn~IA~~~~--V~-------h~sPq~il~k~G~~   93 (112)
T 3iv4_A           31 KHSETCPI------SANAYDQFNKFLYERDMDGYYLIVQ--QERDLSDYIAKKTN--VK-------HESPQAFYFVNGEM   93 (112)
T ss_dssp             EECTTCHH------HHHHHHHHHHHHHHHTCCEEEEEGG--GGHHHHHHHHHHHT--CC-------CCSSEEEEEETTEE
T ss_pred             EECCcCHh------HHHHHHHHHHHhccCCceEEEEEee--cCchhhHHHHHHhC--Cc-------cCCCeEEEEECCEE
Confidence            44667776      665554444    458999999998  56666567788887  32       24789764  5554


Q ss_pred             e
Q psy3969          81 C   81 (86)
Q Consensus        81 i   81 (86)
                      +
T Consensus        94 v   94 (112)
T 3iv4_A           94 V   94 (112)
T ss_dssp             E
T ss_pred             E
Confidence            3

>5nul_A Flavodoxin; electron transport, flavoprotein, FMN; HET: FMN; 1.60A {Clostridium beijerinckii} SCOP: c.23.5.1 PDB: 2flv_A* 2fvx_A* 1fld_A* 3nll_A* 1fvx_A* 1fla_A* 4nll_A* 5nll_A* 2fox_A* 5ull_A* 2fdx_A* 2fax_A* 6nul_A* 1fln_A* 4nul_A*

Probab=82.72  E-value=2.4  Score=26.39  Aligned_cols=36  Identities=11%  Similarity=0.021  Sum_probs=27.5

Q ss_pred             cEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEcc
Q psy3969           4 PYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDIT   41 (86)
Q Consensus         4 ~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~   41 (86)
                      +.|+|.|.+||++  +=.+++..-|.+.|++.+.+|+.
T Consensus         1 i~I~Y~S~tGnT~--~iA~~ia~~l~~~g~~v~~~~~~   36 (138)
T 5nul_A            1 MKIVYWSGTGNTE--KMAELIAKGIIESGKDVNTINVS   36 (138)
T ss_dssp             CEEEEECSSSHHH--HHHHHHHHHHHHTTCCCEEEEGG
T ss_pred             CEEEEECCCchHH--HHHHHHHHHHHHCCCeEEEEEhh
Confidence            3578889999954  44455566678889999999997

>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1

Probab=81.97  E-value=5.6  Score=23.05  Aligned_cols=35  Identities=14%  Similarity=0.124  Sum_probs=25.1

Q ss_pred             EEEEEcccCchhchHHHHHHHHHHHh-----CCCceEEEEccCCCCHh
Q psy3969           5 YKISNTVRGVKGVKKRQQRVLMILDS-----KNIDYTVIDITEPGKEN   47 (86)
Q Consensus         5 ~~y~ss~sgn~~vK~~q~~a~~lL~~-----k~I~f~eiDI~~~~d~~   47 (86)
                      ..|+++-|+.      |.+....|+.     .++.|-.+|++  .+++
T Consensus        26 v~f~a~wC~~------C~~~~~~~~~~~~~~~~~~~~~vd~~--~~~~   65 (107)
T 1gh2_A           26 VKFTMRGCGP------CLRIAPAFSSMSNKYPQAVFLEVDVH--QCQG   65 (107)
T ss_dssp             EEEECSSCHH------HHHHHHHHHHHHHHCTTSEEEEEETT--TSHH
T ss_pred             EEEECCCChh------hHHHHHHHHHHHHHCCCcEEEEEECc--cCHH
Confidence            3577777877      7776666654     47999999998  5654

>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1

Probab=81.96  E-value=5.4  Score=22.88  Aligned_cols=36  Identities=8%  Similarity=0.098  Sum_probs=23.5

Q ss_pred             EEEEEcccCchhchHHHHHHHHHHHh------CCCceEEEEccCCCCHhH
Q psy3969           5 YKISNTVRGVKGVKKRQQRVLMILDS------KNIDYTVIDITEPGKENE   48 (86)
Q Consensus         5 ~~y~ss~sgn~~vK~~q~~a~~lL~~------k~I~f~eiDI~~~~d~~~   48 (86)
                      ..|+++-|+.      |.+....|+.      .++.|-.+|++  .+++.
T Consensus        24 v~f~~~~C~~------C~~~~~~l~~~~~~~~~~~~~~~v~~~--~~~~~   65 (107)
T 1dby_A           24 VDFWAPWCGP------CRIIAPVVDEIAGEYKDKLKCVKLNTD--ESPNV   65 (107)
T ss_dssp             EEEECTTCHH------HHHHHHHHHHHHHHTTTTCEEEEEETT--TCHHH
T ss_pred             EEEECCCCHh------HHHHHHHHHHHHHHhCCceEEEEEECC--CCHHH
Confidence            3567777777      6666555543      24888888987  56553

>1f4p_A Flavodoxin; electron transport, flavoprotein, FMN, 3D-STRCTURE, anisotropic refinement, redox protein; HET: FMN; 1.30A {Desulfovibrio vulgaris} SCOP: c.23.5.1 PDB: 1bu5_A* 1c7f_A* 1c7e_A* 1akr_A* 1fx1_A* 1akt_A* 1akq_A* 1aku_A* 1akv_A* 1azl_A* 1j8q_A* 2fx2_A* 3fx2_A* 4fx2_A* 5fx2_A* 1akw_A* 1i1o_A* 1wsw_A* 1wsb_A* 1xyv_A* ...

Probab=81.73  E-value=1.8  Score=27.22  Aligned_cols=37  Identities=11%  Similarity=0.117  Sum_probs=27.5

Q ss_pred             CcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEcc
Q psy3969           3 KPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDIT   41 (86)
Q Consensus         3 ~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~   41 (86)
                      |+.|+|.|.+||.  ++=.+.+...|...|++.+.+|+.
T Consensus         2 ki~iiy~S~~Gnt--~~~a~~i~~~l~~~g~~v~~~~~~   38 (147)
T 1f4p_A            2 KALIVYGSTTGNT--EYTAETIARELADAGYEVDSRDAA   38 (147)
T ss_dssp             EEEEEEECSSSHH--HHHHHHHHHHHHHHTCEEEEEEGG
T ss_pred             eEEEEEECCcCHH--HHHHHHHHHHHHhcCCeeEEEehh
Confidence            5778888999984  344445556677789999999987

>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A

Probab=81.41  E-value=4.8  Score=23.49  Aligned_cols=31  Identities=6%  Similarity=0.098  Sum_probs=21.7

Q ss_pred             EEEEEcccCchhchHHHHHHHHHHHh-----CCCceEEEEcc
Q psy3969           5 YKISNTVRGVKGVKKRQQRVLMILDS-----KNIDYTVIDIT   41 (86)
Q Consensus         5 ~~y~ss~sgn~~vK~~q~~a~~lL~~-----k~I~f~eiDI~   41 (86)
                      ..|+++-|+.      |.+....|+.     .++.|-.||++
T Consensus        29 v~f~a~wC~~------C~~~~~~l~~~~~~~~~v~~~~vd~~   64 (111)
T 2pu9_C           29 LDMFTQWCGP------SKAMAPKYEKLAEEYLDVIFLKLDCN   64 (111)
T ss_dssp             EEEECTTCHH------HHHHHHHHHHHHHHCTTSEEEEEECS
T ss_pred             EEEECCcCHh------HHHHCHHHHHHHHHCCCeEEEEEecC
Confidence            3467777777      6666655544     46889999986

>1bvy_F Protein (cytochrome P450 BM-3); fatty acid monooxygenase, hemoprotein, flavoprotein, electron transfer, oxidoreductase; HET: HEM FMN; 2.03A {Bacillus megaterium} SCOP: c.23.5.1

Probab=81.33  E-value=2.7  Score=28.84  Aligned_cols=39  Identities=13%  Similarity=0.014  Sum_probs=28.9

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEcc
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDIT   41 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~   41 (86)
                      +.++.|+|.|.+||.+-  =..++..-|.+.|++.+.+|++
T Consensus        21 ~~kv~IvY~S~tGnTe~--~A~~ia~~l~~~g~~v~v~~l~   59 (191)
T 1bvy_F           21 NTPLLVLYGSNMGTAEG--TARDLADIAMSKGFAPQVATLD   59 (191)
T ss_dssp             CCCEEEEEECSSSHHHH--HHHHHHHHHHTTTCCCEEEEGG
T ss_pred             CCeEEEEEECCChHHHH--HHHHHHHHHHhCCCceEEeeHH
Confidence            46789999999999542  2334445567788988888887

>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A

Probab=81.10  E-value=3.5  Score=29.76  Aligned_cols=52  Identities=13%  Similarity=0.229  Sum_probs=40.4

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHH
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQ   54 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~   54 (86)
                      |++..+++.-.||+...++.-.++..+|+..+++++.+.-.  ...++.+..++
T Consensus         8 m~~~~vi~Np~sG~~~~~~~~~~i~~~l~~~~~~~~~~~t~--~~~~a~~~~~~   59 (304)
T 3s40_A            8 FEKVLLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILHTK--EQGDATKYCQE   59 (304)
T ss_dssp             CSSEEEEECTTCSSSCHHHHHHHHHHHHHHHCSEEEEEECC--STTHHHHHHHH
T ss_pred             CCEEEEEECcccCCCchHHHHHHHHHHHHHcCCeEEEEEcc--CcchHHHHHHH
Confidence            77899999999999887777888999999999999877654  33344444444

>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}

Probab=81.07  E-value=6.8  Score=23.44  Aligned_cols=55  Identities=5%  Similarity=-0.082  Sum_probs=33.7

Q ss_pred             EEEEEcccCchhchHHHHHHHHHHHh------CCCceEEEE--ccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEe
Q psy3969           5 YKISNTVRGVKGVKKRQQRVLMILDS------KNIDYTVID--ITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFN   76 (86)
Q Consensus         5 ~~y~ss~sgn~~vK~~q~~a~~lL~~------k~I~f~eiD--I~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFi   76 (86)
                      ..|+++-|+.      |.+....|+.      .++.|-.||  ++  .++    ++.++.+  -+        .+|.+|+
T Consensus        31 v~f~a~wC~~------C~~~~~~l~~~~~~~~~~v~~~~v~~~~d--~~~----~~~~~~~--v~--------~~Pt~~~   88 (126)
T 2l57_A           31 IMFKTDTCPY------CVEMQKELSYVSKEREGKFNIYYARLEEE--KNI----DLAYKYD--AN--------IVPTTVF   88 (126)
T ss_dssp             EEEECSSCHH------HHHHHHHHHHHHHHSSSSCEEEEEETTSS--HHH----HHHHHTT--CC--------SSSEEEE
T ss_pred             EEEECCCCcc------HHHHHHHHHHHHHHhcCCeEEEEEeCCCC--chH----HHHHHcC--Cc--------ceeEEEE
Confidence            4567777877      6666655544      578999999  54  222    3444444  22        5788776


Q ss_pred             ---CCeee
Q psy3969          77 ---EEDYC   81 (86)
Q Consensus        77 ---gd~yi   81 (86)
                         +|+.+
T Consensus        89 ~~~~G~~~   96 (126)
T 2l57_A           89 LDKEGNKF   96 (126)
T ss_dssp             ECTTCCEE
T ss_pred             ECCCCCEE
Confidence               66643

>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0

Probab=80.90  E-value=6  Score=22.75  Aligned_cols=56  Identities=21%  Similarity=0.278  Sum_probs=34.3

Q ss_pred             EEEEEcccCchhchHHHHHHHHHHHh------CCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEe--
Q psy3969           5 YKISNTVRGVKGVKKRQQRVLMILDS------KNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFN--   76 (86)
Q Consensus         5 ~~y~ss~sgn~~vK~~q~~a~~lL~~------k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFi--   76 (86)
                      ..|+++-|+.      |.++...|+.      .++.|-.+|++  .+++..    ++.+  -+        .+|.+++  
T Consensus        27 v~f~a~~C~~------C~~~~~~~~~~~~~~~~~v~~~~vd~~--~~~~l~----~~~~--v~--------~~Pt~~~~~   84 (111)
T 3gnj_A           27 VMFSRKNCHV------CQKVTPVLEELRLNYEESFGFYYVDVE--EEKTLF----QRFS--LK--------GVPQILYFK   84 (111)
T ss_dssp             EEEECSSCHH------HHHHHHHHHHHHHHTTTTSEEEEEETT--TCHHHH----HHTT--CC--------SSCEEEEEE
T ss_pred             EEEeCCCChh------HHHHHHHHHHHHHHcCCceEEEEEECC--cChhHH----HhcC--CC--------cCCEEEEEE
Confidence            4577777777      6666555543      24889999998  566433    3333  22        4676644  


Q ss_pred             CCeeee
Q psy3969          77 EEDYCG   82 (86)
Q Consensus        77 gd~yiG   82 (86)
                      +|+.++
T Consensus        85 ~g~~~~   90 (111)
T 3gnj_A           85 DGEYKG   90 (111)
T ss_dssp             TTEEEE
T ss_pred             CCEEEE
Confidence            776543

>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}

Probab=80.48  E-value=6.4  Score=22.81  Aligned_cols=55  Identities=9%  Similarity=0.081  Sum_probs=33.2

Q ss_pred             EEEEEcccCchhchHHHHHHHHHHHh------CCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEe--
Q psy3969           5 YKISNTVRGVKGVKKRQQRVLMILDS------KNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFN--   76 (86)
Q Consensus         5 ~~y~ss~sgn~~vK~~q~~a~~lL~~------k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFi--   76 (86)
                      ..|+++-|+.      |++....|+.      ..+.|-.+|++  .+++.    .++.+  -+        .+|.+++  
T Consensus        28 v~f~~~~C~~------C~~~~~~l~~~~~~~~~~~~~~~v~~~--~~~~~----~~~~~--v~--------~~Pt~~~~~   85 (112)
T 1t00_A           28 VDFWAAWCGP------CRQIAPSLEAIAAEYGDKIEIVKLNID--ENPGT----AAKYG--VM--------SIPTLNVYQ   85 (112)
T ss_dssp             EEEECTTCHH------HHHHHHHHHHHHHHTTTTCEEEEEETT--TCHHH----HHHTT--CC--------SSSEEEEEE
T ss_pred             EEEECCCCHh------HHhcCHHHHHHHHHhcCCeEEEEEEcC--CCHHH----HHhCC--CC--------cccEEEEEe
Confidence            4567777777      6665554443      35888899988  56543    33344  22        4677765  


Q ss_pred             CCeee
Q psy3969          77 EEDYC   81 (86)
Q Consensus        77 gd~yi   81 (86)
                      +|+.+
T Consensus        86 ~G~~~   90 (112)
T 1t00_A           86 GGEVA   90 (112)
T ss_dssp             TTEEE
T ss_pred             CCEEE
Confidence            66543

>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}

Probab=80.28  E-value=4.3  Score=24.46  Aligned_cols=36  Identities=8%  Similarity=0.160  Sum_probs=24.4

Q ss_pred             EEEEEcccCchhchHHHHHHHHHHHh-------CCCceEEEEccCCCCHhH
Q psy3969           5 YKISNTVRGVKGVKKRQQRVLMILDS-------KNIDYTVIDITEPGKENE   48 (86)
Q Consensus         5 ~~y~ss~sgn~~vK~~q~~a~~lL~~-------k~I~f~eiDI~~~~d~~~   48 (86)
                      ..|+++-|+.      |.++...|+.       +++.|-.||++  .+++.
T Consensus        38 v~f~a~~C~~------C~~~~~~l~~l~~~~~~~~v~~~~vd~d--~~~~~   80 (121)
T 2j23_A           38 IDFWATWCGP------CKMIGPVFEKISDTPAGDKVGFYKVDVD--EQSQI   80 (121)
T ss_dssp             EEEECTTCST------HHHHHHHHHHHHTSTHHHHSEEEEEETT--TCHHH
T ss_pred             EEEECCCCHh------HHHHHHHHHHHHHHCcCCcEEEEEEECc--CCHHH
Confidence            4567777887      6666655543       34889999998  56553

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	86
d1t1va_	93	c.47.1.14 (A:) SH3BGRL3 {Mouse (Mus musculus) [Tax	6e-11

>d1t1va_ c.47.1.14 (A:) SH3BGRL3 {Mouse (Mus musculus) [TaxId: 10090]} Length = 93

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: SH3BGR (SH3-binding, glutamic acid-rich protein-like)
domain: SH3BGRL3
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 51.4 bits (123), Expect = 6e-11
 Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 10/73 (13%)

Query: 10 TVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNP 69
          +V G + +K +Q  V  ILD K I Y ++DI++     ++      +             
Sbjct: 10 SVTGSREIKSQQSEVTRILDGKRIQYQLVDISQDNALRDEMRTLAGNPK----------A 59

Query: 70 LPPQIFNEEDYCG 82
           PPQI N   YCG
Sbjct: 60 TPPQIVNGNHYCG 72

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	86
d1t1va_	93	SH3BGRL3 {Mouse (Mus musculus) [TaxId: 10090]}	99.96
d1fova_	82	Glutaredoxin (Grx, thioltransferase) {Escherichia	99.85
d1nm3a1	74	C-terminal, Grx domain of Hybrid-Prx5 {Haemophilus	99.81
d1r7ha_	74	Glutaredoxin-like NRDH-redoxin {Corynebacterium am	99.78
d1wika_	109	Thioredoxin-like protein 2 {Mouse (Mus musculus) [	99.77
d1egoa_	85	Glutaredoxin (Grx, thioltransferase) {Escherichia	99.77
d1h75a_	76	Glutaredoxin-like NRDH-redoxin {Escherichia coli [	99.77
d1abaa_	87	Glutaredoxin (Grx, thioltransferase) {Bacteriophag	99.75
d1ktea_	105	Glutaredoxin (Grx, thioltransferase) {Pig (Sus scr	99.72
d1wjka_	100	Thioredoxin-like structure containing protein C330	98.56
d1g7oa2	75	Glutaredoxin 2 {Escherichia coli [TaxId: 562]}	98.05
d1ttza_	75	Hypothetical protein XCC2852 {Xanthomonas campestr	97.91
d1e6ba2	80	Class zeta GST {Mouse-ear cress (Arabidopsis thali	97.79
d1gwca2	83	Class tau GST {Aegilops tauschii, also known as Tr	97.77
d1v2aa2	83	Class delta GST {Mosquito (Anopheles dirus b), iso	97.72
d1ljra2	79	Class theta GST {Human (Homo sapiens) [TaxId: 9606	97.69
d1fw1a2	83	Class zeta GST {Human (Homo sapiens) [TaxId: 9606]	97.68
d1z3ea1	114	Regulatory protein Spx {Bacillus subtilis [TaxId:	97.6
d1k0da2	92	Yeast prion protein ure2p, nitrogen regulation fra	97.51
d1z9ha2	113	Microsomal prostaglandin E synthase-2 {Crab-eating	97.5
d1r5aa2	85	Class delta GST {Mosquito (Anopheles dirus b), iso	97.42
d1b48a2	78	Class alpha GST {Mouse (Mus musculus), (a1-4) [Tax	97.41
d1axda2	80	Class phi GST {Maize (Zea mays), type I [TaxId: 45	97.41
d1gula2	77	Class alpha GST {Human (Homo sapiens), (a1-1) [Tax	97.38
d1oyja2	84	Class tau GST {Rice (Oryza sativa) [TaxId: 4530]}	97.31
d2a2ra2	77	Class pi GST {Human (Homo sapiens) [TaxId: 9606]}	97.27
d1aw9a2	81	Class phi GST {Maize (Zea mays), type III [TaxId:	97.17
d1hyua4	96	Alkyl hydroperoxide reductase subunit F (AhpF), N-	97.14
d1jlva2	84	Class delta GST {Mosquito (Anopheles dirus b), iso	97.13
d1rw1a_	114	Hypothetical protein PA3664 (YffB) {Pseudomonas ae	97.12
d1eema2	98	Class omega GST {Human (Homo sapiens) [TaxId: 9606	97.09
d1k3ya2	79	Class alpha GST {Human (Homo sapiens), (a1-1) [Tax	97.08
d2cvda2	74	Class sigma GST {Human (Homo sapiens) [TaxId: 9606	97.05
d1gnwa2	84	Class phi GST {Mouse-ear cress (Arabidopsis thalia	96.88
d1j9ba_	138	Arsenate reductase ArsC {Escherichia coli [TaxId:	96.87
d1tw9a2	77	Class sigma GST {Heligmosomoides polygyrus [TaxId:	96.72
d1k0ma2	86	Chloride intracellular channel 1 (clic1) {Human (H	96.59
d2fnoa2	87	Hypothetical protein AGR_pAT_752p/Atu5508 {Agrobac	96.3
d1okta2	85	Pf GST {Malarial parasite (Plasmodium falciparum)	96.3
d2gsqa2	75	Class sigma GST {Squid (Ommastrephes sloani pacifi	96.15
d1duga2	80	Class alpha GST {Schistosoma japonicum [TaxId: 618	96.09
d1tu7a2	77	Class pi GST {Onchocerca volvulus [TaxId: 6282]}	95.86
d1m0ua2	76	Class sigma GST {Fruit fly (Drosophila melanogaste	95.72
d1iloa_	77	MTH985, a thioredoxin {Archaeon Methanobacterium t	95.62
d1nhoa_	85	MTH807, thioredoxin/glutaredoxin-like protein {Arc	95.28
d1fhea2	80	Class alpha GST {Fasciola hepatica [TaxId: 6192]}	94.66
d2c4ja2	84	Class mu GST {Human (Homo sapiens) [TaxId: 9606]}	93.52
d1pmta2	80	Class beta GST {Proteus mirabilis [TaxId: 584]}	92.91
d1n2aa2	80	Class beta GST {Escherichia coli [TaxId: 562]}	91.8
d1a8la2	107	Protein disulfide isomerase, PDI {Archaeon Pyrococ	90.06
d1nhya2	75	GST-like domain of elongation factor 1-gamma {Bake	89.51
d1oe8a2	81	Class alpha GST {Blood fluke (Schistosoma haematob	89.25
d1ycga1	149	Nitric oxide reductase C-terminal domain {Moorella	89.04
d1f2ea2	80	Class beta GST {Sphingomonas paucimobilis [TaxId:	87.68
d1fo5a_	85	MJ0307, thioredoxin/glutaredoxin-like protein {Arc	87.52
d1e5da1	152	Rubredoxin oxygen:oxidoreductase (ROO), C-terminal	85.47
d1vmea1	148	ROO-like flavoprotein TM0755, C-terminal domain {T	81.46
d1f4pa_	147	Flavodoxin {Desulfovibrio vulgaris [TaxId: 881]}	80.67
d1ja1a2	177	NADPH-cytochrome p450 reductase, N-terminal domain	80.49
d2fz5a1	137	Flavodoxin {Megasphaera elsdenii [TaxId: 907]}	80.33

>d1t1va_ c.47.1.14 (A:) SH3BGRL3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: SH3BGR (SH3-binding, glutamic acid-rich protein-like)
domain: SH3BGRL3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.96  E-value=1.5e-30  Score=165.27  Aligned_cols=76  Identities=32%  Similarity=0.545  Sum_probs=71.8

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCee
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDY   80 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~y   80 (86)
                      |..+.||+||+|||++++++|+||++||+++||+|++|||+  .|++.|++|++++|.        +.+||||||+||+|
T Consensus         1 m~~i~vy~ts~~~~~~~~~~~~r~~~lL~~~~I~y~~iDi~--~d~~~~~~~~~~~g~--------~~~t~Pqifv~~~~   70 (93)
T d1t1va_           1 MSGLRVYSTSVTGSREIKSQQSEVTRILDGKRIQYQLVDIS--QDNALRDEMRTLAGN--------PKATPPQIVNGNHY   70 (93)
T ss_dssp             CCCEEEEECSSCSCHHHHHHHHHHHHHHHHTTCCCEEEETT--SCHHHHHHHHHHTTC--------TTCCSCEEEETTEE
T ss_pred             CCCEEEEEccCcCChhhHHHHHHHHHHHHHCCCceEEEEec--CchhHHHHHHHhccC--------CCceeEEEEECCEE
Confidence            88999999999999999999999999999999999999999  899999999999972        34699999999999


Q ss_pred             eeccCC
Q psy3969          81 CGVFRY   86 (86)
Q Consensus        81 iGgyd~   86 (86)
                      ||||||
T Consensus        71 iGg~de   76 (93)
T d1t1va_          71 CGDYEL   76 (93)
T ss_dssp             EEEHHH
T ss_pred             EecHHH
Confidence            999985

>d1fova_ c.47.1.1 (A:) Glutaredoxin (Grx, thioltransferase) {Escherichia coli, Grx3 [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Glutaredoxin (Grx, thioltransferase)
species: Escherichia coli, Grx3 [TaxId: 562]

Probab=99.85  E-value=2.2e-22  Score=123.61  Aligned_cols=66  Identities=21%  Similarity=0.280  Sum_probs=62.1

Q ss_pred             CcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeeee
Q psy3969           3 KPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCG   82 (86)
Q Consensus         3 ~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yiG   82 (86)
                      ++.||.++.|+.      |.+|+++|+++||+|+++||+  .+++.+++|.+.+|  .+        ||||||+||+|+|
T Consensus         2 ~I~iys~~~Cp~------C~~ak~~L~~~~i~y~~~di~--~~~~~~~~~~~~~g--~~--------tvP~i~i~~~~IG   63 (82)
T d1fova_           2 NVEIYTKETCPY------CHRAKALLSSKGVSFQELPID--GNAAKREEMIKRSG--RT--------TVPQIFIDAQHIG   63 (82)
T ss_dssp             CEEEEECSSCHH------HHHHHHHHHHHTCCCEEEECT--TCSHHHHHHHHHHS--SC--------CSCEEEETTEEEE
T ss_pred             cEEEEeCCCCHh------HHHHHHHHHHcCCCeEEEecc--chHHHHHHHHHHhC--CC--------CCCeEEECCEEEe
Confidence            689999999999      999999999999999999999  89999999999998  44        9999999999999


Q ss_pred             ccCC
Q psy3969          83 VFRY   86 (86)
Q Consensus        83 gyd~   86 (86)
                      ||||
T Consensus        64 G~~e   67 (82)
T d1fova_          64 GYDD   67 (82)
T ss_dssp             SHHH
T ss_pred             cHHH
Confidence            9975

>d1nm3a1 c.47.1.1 (A:166-239) C-terminal, Grx domain of Hybrid-Prx5 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: C-terminal, Grx domain of Hybrid-Prx5
species: Haemophilus influenzae [TaxId: 727]

Probab=99.81  E-value=6.6e-21  Score=115.16  Aligned_cols=67  Identities=12%  Similarity=0.043  Sum_probs=58.4

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCee
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDY   80 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~y   80 (86)
                      |.++.||..+-|+.      |.+|++||+++||+|+++||+  .+++ ++++.+.+|  .        .||||||+||+|
T Consensus         4 ~~~I~iYs~~~C~~------C~~ak~lL~~~~i~~~~~~v~--~~~~-~~~~~~~~~--~--------~tvP~i~i~g~~   64 (74)
T d1nm3a1           4 QESISIFTKPGCPF------CAKAKQLLHDKGLSFEEIILG--HDAT-IVSVRAVSG--R--------TTVPQVFIGGKH   64 (74)
T ss_dssp             CCCEEEEECSSCHH------HHHHHHHHHHHTCCCEEEETT--TTCC-HHHHHHHTC--C--------SSSCEEEETTEE
T ss_pred             cCcEEEEECCCCHH------HHHHHHHHHHcCCCeEEEEcc--CcHH-HHHHHHHhC--C--------ccCCEEEECCEE
Confidence            46789999999999      999999999999999999998  5554 566677666  3        499999999999


Q ss_pred             eeccCC
Q psy3969          81 CGVFRY   86 (86)
Q Consensus        81 iGgyd~   86 (86)
                      +|||||
T Consensus        65 IGG~~e   70 (74)
T d1nm3a1          65 IGGSDD   70 (74)
T ss_dssp             EESHHH
T ss_pred             EEChHH
Confidence            999985

>d1r7ha_ c.47.1.1 (A:) Glutaredoxin-like NRDH-redoxin {Corynebacterium ammoniagenes [TaxId: 1697]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Glutaredoxin-like NRDH-redoxin
species: Corynebacterium ammoniagenes [TaxId: 1697]

Probab=99.78  E-value=2.5e-19  Score=107.69  Aligned_cols=64  Identities=13%  Similarity=0.144  Sum_probs=58.0

Q ss_pred             CcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeeee
Q psy3969           3 KPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCG   82 (86)
Q Consensus         3 ~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yiG   82 (86)
                      ++.||.++-|+.      |.+|+++|+++||+|+++||+  .+++.+++|++. |  .        .|+||||+||+|+|
T Consensus         2 ~v~iYt~~~C~~------C~~ak~~L~~~~i~~~~~~i~--~~~~~~~~~~~~-g--~--------~tvP~i~i~g~~ig   62 (74)
T d1r7ha_           2 SITLYTKPACVQ------CTATKKALDRAGLAYNTVDIS--LDDEARDYVMAL-G--Y--------VQAPVVEVDGEHWS   62 (74)
T ss_dssp             CEEEEECTTCHH------HHHHHHHHHHTTCCCEEEETT--TCHHHHHHHHHT-T--C--------BCCCEEEETTEEEE
T ss_pred             EEEEEeCCCChh------HHHHHHHHHHcCCceEEEEcc--CCHHHHHHHHHh-C--C--------CCcCEEEECCEEEe
Confidence            389999999999      999999999999999999999  899999988654 4  2        38999999999999


Q ss_pred             ccC
Q psy3969          83 VFR   85 (86)
Q Consensus        83 gyd   85 (86)
                      ||+
T Consensus        63 Gf~   65 (74)
T d1r7ha_          63 GFR   65 (74)
T ss_dssp             SCC
T ss_pred             CCC
Confidence            996

>d1wika_ c.47.1.1 (A:) Thioredoxin-like protein 2 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Thioredoxin-like protein 2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.77  E-value=2.5e-19  Score=116.55  Aligned_cols=66  Identities=21%  Similarity=0.326  Sum_probs=58.7

Q ss_pred             CcEEEEE-----cccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeC
Q psy3969           3 KPYKISN-----TVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNE   77 (86)
Q Consensus         3 ~~~~y~s-----s~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFig   77 (86)
                      ++.||..     +-|++      |.+|++||+++||+|+++||.  .+++.+++|.+.++  ++        ||||||++
T Consensus        16 ~VvvF~Kgt~~~p~Cp~------c~~ak~lL~~~~i~~~~~~v~--~~~~~~~~l~~~t~--~~--------TvPqIFi~   77 (109)
T d1wika_          16 SVMLFMKGNKQEAKCGF------SKQILEILNSTGVEYETFDIL--EDEEVRQGLKTFSN--WP--------TYPQLYVR   77 (109)
T ss_dssp             SEEEEESSTTTCCCSST------HHHHHHHHHHTCSCEEEEESS--SCHHHHHHHHHHHS--CC--------SSCEEECS
T ss_pred             CEEEEeCCCCCCCCChH------HHHHHHHHHhcCCCceEEEec--ccHHHHHHHHHhcC--CC--------CCCeEEEC
Confidence            4566665     44899      999999999999999999999  79999999999997  43        99999999


Q ss_pred             CeeeeccCC
Q psy3969          78 EDYCGVFRY   86 (86)
Q Consensus        78 d~yiGgyd~   86 (86)
                      |+|||||||
T Consensus        78 g~~IGG~dd   86 (109)
T d1wika_          78 GDLVGGLDI   86 (109)
T ss_dssp             SSEEECHHH
T ss_pred             CEEEcCHHH
Confidence            999999985

>d1egoa_ c.47.1.1 (A:) Glutaredoxin (Grx, thioltransferase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Glutaredoxin (Grx, thioltransferase)
species: Escherichia coli [TaxId: 562]

Probab=99.77  E-value=4.5e-20  Score=114.13  Aligned_cols=68  Identities=19%  Similarity=0.217  Sum_probs=60.3

Q ss_pred             CcEEEEEcccCchhchHHHHHHHHHHHhC-----CCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeC
Q psy3969           3 KPYKISNTVRGVKGVKKRQQRVLMILDSK-----NIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNE   77 (86)
Q Consensus         3 ~~~~y~ss~sgn~~vK~~q~~a~~lL~~k-----~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFig   77 (86)
                      |+.||..+-|+.      |.+|++||+++     +|+|+++|+.  .+++.+++|.++++.        +..|+||||+|
T Consensus         2 kvviysk~~Cp~------C~~aK~ll~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~~~--------~~~tvPqIfi~   65 (85)
T d1egoa_           2 QTVIFGRSGCPY------CVRAKDLAEKLSNERDDFQYQYVDIR--AEGITKEDLQQKAGK--------PVETVPQIFVD   65 (85)
T ss_dssp             EEEEECCTTSTH------HHHHHHHHHHHHHHHSSCEEEEECHH--HHTCCSHHHHHHTCC--------CSCCSCEEEET
T ss_pred             EEEEEeCCCCHh------HHHHHHHHHHcCCCCCCceEEEEecC--CCHHHHHHHHHHhcC--------CCCCCCEEEEC
Confidence            688999999999      99999999994     5889999998  788999999999972        23599999999


Q ss_pred             CeeeeccCC
Q psy3969          78 EDYCGVFRY   86 (86)
Q Consensus        78 d~yiGgyd~   86 (86)
                      |+|+|||||
T Consensus        66 g~~IGG~~e   74 (85)
T d1egoa_          66 QQHIGGYTD   74 (85)
T ss_dssp             TEEEESSHH
T ss_pred             CEEEECHHH
Confidence            999999985

>d1h75a_ c.47.1.1 (A:) Glutaredoxin-like NRDH-redoxin {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Glutaredoxin-like NRDH-redoxin
species: Escherichia coli [TaxId: 562]

Probab=99.77  E-value=7.2e-19  Score=106.67  Aligned_cols=65  Identities=11%  Similarity=0.124  Sum_probs=58.4

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCee
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDY   80 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~y   80 (86)
                      |+ +.||.++-|++      |.+|+++|+++||+|+++||+  .|++.+++++. .|  .        .++||||+||++
T Consensus         1 Mk-i~iYs~~~C~~------C~~ak~~L~~~~i~y~~~~i~--~~~~~~~~~~~-~g--~--------~tvP~i~i~~~~   60 (76)
T d1h75a_           1 MR-ITIYTRNDCVQ------CHATKRAMENRGFDFEMINVD--RVPEAAEALRA-QG--F--------RQLPVVIAGDLS   60 (76)
T ss_dssp             CC-EEEEECTTCHH------HHHHHHHHHHTTCCCEEEETT--TCHHHHHHHHH-TT--C--------CSSCEEEETTEE
T ss_pred             CE-EEEEeCCCCcc------HHHHHHHHHhcCceeEEEeec--CCHHHHHHHHh-cC--C--------CCCCEEEECCEE
Confidence            44 89999999999      999999999999999999999  89999888765 45  3        389999999999


Q ss_pred             eeccC
Q psy3969          81 CGVFR   85 (86)
Q Consensus        81 iGgyd   85 (86)
                      +|||+
T Consensus        61 i~Gf~   65 (76)
T d1h75a_          61 WSGFR   65 (76)
T ss_dssp             EESCC
T ss_pred             EECCC
Confidence            99996

>d1abaa_ c.47.1.1 (A:) Glutaredoxin (Grx, thioltransferase) {Bacteriophage T4 [TaxId: 10665]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Glutaredoxin (Grx, thioltransferase)
species: Bacteriophage T4 [TaxId: 10665]

Probab=99.75  E-value=9.4e-19  Score=109.33  Aligned_cols=64  Identities=16%  Similarity=0.157  Sum_probs=52.5

Q ss_pred             cCchhchHHHHHHHHHHHhCCCceEEEEccCC---CCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeC-CeeeeccCC
Q psy3969          12 RGVKGVKKRQQRVLMILDSKNIDYTVIDITEP---GKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNE-EDYCGVFRY   86 (86)
Q Consensus        12 sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~---~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFig-d~yiGgyd~   86 (86)
                      |+.      |.+|++||+++||+|+++++...   .+...+++|.++++.  ..   .+..||||||++ |+|||||||
T Consensus        14 C~~------C~~AK~lL~~~~i~y~~~~i~~~~~~~~~~~~~e~~~~~~~--~~---~~~~TvPqIfi~dg~~IGG~de   81 (87)
T d1abaa_          14 CGP------CDNAKRLLTVKKQPFEFINIMPEKGVFDDEKIAELLTKLGR--DT---QIGLTMPQVFAPDGSHIGGFDQ   81 (87)
T ss_dssp             CHH------HHHHHHHHHHTTCCEEEEESCSBTTBCCHHHHHHHHHHHTC--SC---CTTCCSCEEECTTSCEEESHHH
T ss_pred             Chh------HHHHHHHHHHcCCCceeccccccccccCHHHHHHHHHHhcc--cC---CCCceeCeEEecCCcEEECHHH
Confidence            777      99999999999999999999621   246788899999862  21   256799999995 799999985

>d1ktea_ c.47.1.1 (A:) Glutaredoxin (Grx, thioltransferase) {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Glutaredoxin (Grx, thioltransferase)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.72  E-value=1.2e-18  Score=111.73  Aligned_cols=67  Identities=15%  Similarity=0.106  Sum_probs=55.3

Q ss_pred             CCcEEEEEcccCchhchHHHHHHHHHHHhCCCc-----eEEEEccCCCCHhHHHHHHHhc-CCCCCCCCCCCCCCCCeEE
Q psy3969           2 KKPYKISNTVRGVKGVKKRQQRVLMILDSKNID-----YTVIDITEPGKENEKEFMQQNS-KATPSDSTVKSNPLPPQIF   75 (86)
Q Consensus         2 ~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~-----f~eiDI~~~~d~~~r~~M~~~~-g~~~~~~~~~~~~tvPQIF   75 (86)
                      .++.||.++-|++      |.+|++||++.|++     |.++|+.  .|+..++++.++. |          .+|+||||
T Consensus        12 ~~Vviysk~~Cp~------C~~ak~ll~~~~~~~~~~~~~e~d~~--~d~~~~~~~l~~~~g----------~~tvPqIf   73 (105)
T d1ktea_          12 GKVVVFIKPTCPF------CRKTQELLSQLPFKEGLLEFVDITAT--SDTNEIQDYLQQLTG----------ARTVPRVF   73 (105)
T ss_dssp             TCEEEEECSSCHH------HHHHHHHHHHSCBCTTSEEEEEGGGS--TTHHHHHHHHHHHHS----------CCCSCEEE
T ss_pred             CCEEEEECCCCch------HHHHHHHHHHhCCccceeeeeecccc--cccHHHHHHHhhccC----------CCcCcEEE
Confidence            4788999999998      99999999999977     5666666  6777777665554 5          34999999


Q ss_pred             eCCeeeeccCC
Q psy3969          76 NEEDYCGVFRY   86 (86)
Q Consensus        76 igd~yiGgyd~   86 (86)
                      +||+|+|||||
T Consensus        74 i~g~~IGG~~e   84 (105)
T d1ktea_          74 IGKECIGGCTD   84 (105)
T ss_dssp             ETTEEEESHHH
T ss_pred             ECCEEEecHHH
Confidence            99999999985

>d1wjka_ c.47.1.1 (A:) Thioredoxin-like structure containing protein C330018D20Rik {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Thioredoxin-like structure containing protein C330018D20Rik
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.56  E-value=2.9e-08  Score=61.90  Aligned_cols=62  Identities=6%  Similarity=-0.022  Sum_probs=53.9

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCee
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDY   80 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~y   80 (86)
                      |.++++|++.-|+.      |.+|+.+|+..+++|...+|.  .|.+...+|.++.+  .         .+|.||++|+.
T Consensus        16 ~p~i~lft~~~C~~------C~~a~~~L~~~~~~~~~~~v~--vd~~~~~~l~~~y~--~---------~VPvl~idg~~   76 (100)
T d1wjka_          16 LPVLTLFTKAPCPL------CDEAKEVLQPYKDRFILQEVD--ITLPENSTWYERYK--F---------DIPVFHLNGQF   76 (100)
T ss_dssp             CCEEEEEECSSCHH------HHHHHHHTSTTSSSSEEEEEE--TTSSTTHHHHHHSS--S---------SCSEEEESSSE
T ss_pred             CCEEEEEECCCCCC------hHHHHHHHHHhhhhcceEEEe--cccccCHHHHHHhc--c---------cCCceeecCce
Confidence            67889999999999      999999999999999988887  67777888999887  2         38999998866


Q ss_pred             e
Q psy3969          81 C   81 (86)
Q Consensus        81 i   81 (86)
                      +
T Consensus        77 ~   77 (100)
T d1wjka_          77 L   77 (100)
T ss_dssp             E
T ss_pred             E
Confidence            4

>d1g7oa2 c.47.1.5 (A:1-75) Glutaredoxin 2 {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Glutaredoxin 2
species: Escherichia coli [TaxId: 562]

Probab=98.05  E-value=4.7e-06  Score=49.24  Aligned_cols=60  Identities=13%  Similarity=0.020  Sum_probs=46.8

Q ss_pred             EEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeC-Ceeeec
Q psy3969           5 YKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNE-EDYCGV   83 (86)
Q Consensus         5 ~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFig-d~yiGg   83 (86)
                      .+|....|.+      |++|+..|..|||+|+.+.+.  .+  ..+++.+.++          ..+||.+..+ |+.+.+
T Consensus         2 kLY~~~~cP~------~~rvr~~l~~kgi~~e~~~~~--~~--~~~~~~~~~p----------~~~VP~L~~~dg~~i~e   61 (75)
T d1g7oa2           2 KLYIYDHCPY------CLKARMIFGLKNIPVELHVLL--ND--DAETPTRMVG----------QKQVPILQKDDSRYMPE   61 (75)
T ss_dssp             EEEECTTCHH------HHHHHHHHHHHTCCCEEEECC--TT--TTHHHHHHHS----------SSCCCEEEETTTEEEEC
T ss_pred             EEEccCCCCc------hHHHHHHHHHhCCCccccccc--cc--chHHHHHhCC----------CCceEEEEEcCCCEEec
Confidence            4788888998      999999999999999999986  23  2356677665          2389999975 477664


Q ss_pred             c
Q psy3969          84 F   84 (86)
Q Consensus        84 y   84 (86)
                      .
T Consensus        62 S   62 (75)
T d1g7oa2          62 S   62 (75)
T ss_dssp             H
T ss_pred             H
Confidence            3

>d1ttza_ c.47.1.1 (A:) Hypothetical protein XCC2852 {Xanthomonas campestris [TaxId: 339]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Hypothetical protein XCC2852
species: Xanthomonas campestris [TaxId: 339]

Probab=97.91  E-value=1.3e-05  Score=48.09  Aligned_cols=57  Identities=5%  Similarity=-0.134  Sum_probs=43.7

Q ss_pred             cEEEEEcccCchhchHHHHHHHHHHHh-CCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeeee
Q psy3969           4 PYKISNTVRGVKGVKKRQQRVLMILDS-KNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCG   82 (86)
Q Consensus         4 ~~~y~ss~sgn~~vK~~q~~a~~lL~~-k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yiG   82 (86)
                      +++|.+.-|+-      |..|+.+|.+ .+++|+++||+  .|++.++    +-|  -         .||-|.+++...-
T Consensus         2 ltLyt~~~C~L------Ce~A~~~l~~~~~~~~~~vdI~--~d~~l~~----~y~--~---------~IPVl~~~~~~~l   58 (75)
T d1ttza_           2 LTLYQRDDCHL------CDQAVEALAQARAGAFFSVFID--DDAALES----AYG--L---------RVPVLRDPMGREL   58 (75)
T ss_dssp             EEEEECSSCHH------HHHHHHHHHHTTCCCEEEEECT--TCHHHHH----HHT--T---------TCSEEECTTCCEE
T ss_pred             EEEECCCCccH------HHHHHHHHHhccCCcEEEEEcc--CCHHHHH----HhC--C---------eeeEEEECCeeEE
Confidence            57899999998      9999997755 78999999999  7876554    445  2         4899998764443


Q ss_pred             c
Q psy3969          83 V   83 (86)
Q Consensus        83 g   83 (86)
                      +
T Consensus        59 ~   59 (75)
T d1ttza_          59 D   59 (75)
T ss_dssp             E
T ss_pred             c
Confidence            3

>d1e6ba2 c.47.1.5 (A:8-87) Class zeta GST {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class zeta GST
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.79  E-value=6.2e-05  Score=44.41  Aligned_cols=65  Identities=15%  Similarity=0.088  Sum_probs=48.2

Q ss_pred             CcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeeee
Q psy3969           3 KPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCG   82 (86)
Q Consensus         3 ~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yiG   82 (86)
                      |..+|.-..|++      |++++.+|+.+||+|+.+.|.-...+....+..+...          ...||-+-.||..+-
T Consensus         1 ~m~Ly~~~~sp~------~~kv~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p----------~~~vPvL~~~~~~l~   64 (80)
T d1e6ba2           1 KLKLYSYWRSSC------AHRVRIALALKGLDYEYIPVNLLKGDQFDSDFKKINP----------MGTVPALVDGDVVIN   64 (80)
T ss_dssp             CCEEEECTTCHH------HHHHHHHHHHTTCCCEEEECCTTTTGGGCHHHHHHCT----------TCCSSEEEETTEEEE
T ss_pred             CEEEEeCCCChH------HHHHHHHHHHhCCCCEEEEEeccccccccHHHhhcCc----------cccCCEEEECCEEEE
Confidence            467888888888      9999999999999999888752123333445555442          347999999988765


Q ss_pred             c
Q psy3969          83 V   83 (86)
Q Consensus        83 g   83 (86)
                      +
T Consensus        65 e   65 (80)
T d1e6ba2          65 D   65 (80)
T ss_dssp             S
T ss_pred             C
Confidence            4

>d1gwca2 c.47.1.5 (A:4-86) Class tau GST {Aegilops tauschii, also known as Triticum tauschii [TaxId: 37682]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class tau GST
species: Aegilops tauschii, also known as Triticum tauschii [TaxId: 37682]

Probab=97.77  E-value=3.3e-05  Score=45.29  Aligned_cols=62  Identities=11%  Similarity=0.089  Sum_probs=46.9

Q ss_pred             cEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeeeec
Q psy3969           4 PYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCGV   83 (86)
Q Consensus         4 ~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yiGg   83 (86)
                      ..+|-+..|.+      |+|++.+|..|||+|+.+.|.  .... ..++.+..+         ....||-+..||..+..
T Consensus         4 mkLy~~~~sp~------~~rvr~~l~~kgi~~e~~~v~--~~~~-~~~~~~~~~---------~~~~~p~l~~dg~~i~e   65 (83)
T d1gwca2           4 LKLLGAWPSPF------VTRVKLALALKGLSYEDVEED--LYKK-SELLLKSNP---------VHKKIPVLIHNGAPVCE   65 (83)
T ss_dssp             EEEEECTTCHH------HHHHHHHHHHHTCCCEEEECC--TTSC-CHHHHHHST---------TTCCSCEEEETTEEEES
T ss_pred             EEEEecCCChH------HHHHHHHHHHCCCCeEEEEEe--ccch-hHHHHHHHh---------ccCCCceeecCCceEcC
Confidence            46888899999      999999999999999999996  2222 234455443         12379999999988764

>d1v2aa2 c.47.1.5 (A:1-83) Class delta GST {Mosquito (Anopheles dirus b), isozyme 1-6 [TaxId: 123217]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class delta GST
species: Mosquito (Anopheles dirus b), isozyme 1-6 [TaxId: 123217]

Probab=97.72  E-value=8.5e-05  Score=43.99  Aligned_cols=61  Identities=7%  Similarity=0.052  Sum_probs=48.5

Q ss_pred             EEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeeee
Q psy3969           5 YKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCG   82 (86)
Q Consensus         5 ~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yiG   82 (86)
                      .+|++..|.+      |+++..+|+.+||+|+.+.|.- ...+.+++..+...          ..+||-+-.||..+-
T Consensus         2 ~LY~~~~Sp~------~~~v~~~l~~~gi~~e~~~v~~-~~~~~~~~~~~~nP----------~g~VP~L~~~g~~l~   62 (83)
T d1v2aa2           2 DYYYSLISPP------CQSAILLAKKLGITLNLKKTNV-HDPVERDALTKLNP----------QHTIPTLVDNGHVVW   62 (83)
T ss_dssp             EEEECTTCHH------HHHHHHHHHHHTCCCEEEECCT-TCHHHHHHHHHHCT----------TCCSCEEEETTEEEE
T ss_pred             EEECCCCChH------HHHHHHHHHHhCCCceEEEEeC-CCCcchHHHHHHhh----------ccCCCEEEEccceeE
Confidence            5899999988      9999999999999999998862 45566777776553          348999988877654

>d1ljra2 c.47.1.5 (A:1-79) Class theta GST {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class theta GST
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.69  E-value=8.7e-05  Score=43.30  Aligned_cols=63  Identities=8%  Similarity=-0.011  Sum_probs=48.0

Q ss_pred             cEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeeee
Q psy3969           4 PYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCG   82 (86)
Q Consensus         4 ~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yiG   82 (86)
                      ..+|++..|.+      |+++.-+|+.+||+|+.+.|+-...+....++.+...          ...||-+-.||..+-
T Consensus         3 m~LY~~~~sp~------~r~v~~~l~e~gi~~e~~~v~~~~~~~~~~~~~~~np----------~g~vP~L~d~~~~l~   65 (79)
T d1ljra2           3 LELFLDLVSQP------SRAVYIFAKKNGIPLELRTVDLVKGQHKSKEFLQINS----------LGKLPTLKDGDFILT   65 (79)
T ss_dssp             CEEEECTTSHH------HHHHHHHHHHTTCCCEEEECCTTTTGGGSHHHHTTCT----------TCCSCEEEETTEEEE
T ss_pred             EEEeeCCCChH------HHHHHHHHHHhCCCCEEEeeeccccccCCHHHHHhhh----------hcceeEEEeCCcEEE
Confidence            57899999988      9999999999999999998863233334456665443          348999988887664

>d1fw1a2 c.47.1.5 (A:5-87) Class zeta GST {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class zeta GST
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.68  E-value=0.00012  Score=43.55  Aligned_cols=65  Identities=22%  Similarity=0.140  Sum_probs=48.6

Q ss_pred             CcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccC--CCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCee
Q psy3969           3 KPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITE--PGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDY   80 (86)
Q Consensus         3 ~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~--~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~y   80 (86)
                      ||.+|....|++      |++++.+|..|||+|+.+.|+-  ...+....++.+...          ..+||-+..||..
T Consensus         1 kpiLY~~~~S~~------s~rvr~~L~ekgi~~e~~~v~l~~~~~~~~~~~~~~~nP----------~g~vP~L~~~g~~   64 (83)
T d1fw1a2           1 KPILYSYFRSSC------SWRVRIALALKGIDYKTVPINLIKDGGQQFSKDFQALNP----------MKQVPTLKIDGIT   64 (83)
T ss_dssp             CCEEEECTTCHH------HHHHHHHHHHTTCCCEEEECCSSTTSCGGGSHHHHHHCT----------TCCSCEEEETTEE
T ss_pred             CCEEEcCCCChH------HHHHHHHHHHhCCCCEEEeccccccccccCCHHHHHhcc----------CCccCEEEECCEE
Confidence            789998889988      9999999999999998876641  112333456666553          2389999998887


Q ss_pred             eec
Q psy3969          81 CGV   83 (86)
Q Consensus        81 iGg   83 (86)
                      +..
T Consensus        65 i~e   67 (83)
T d1fw1a2          65 IHQ   67 (83)
T ss_dssp             EES
T ss_pred             Eec
Confidence            643

>d1z3ea1 c.47.1.12 (A:1-114) Regulatory protein Spx {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: ArsC-like
domain: Regulatory protein Spx
species: Bacillus subtilis [TaxId: 1423]

Probab=97.60  E-value=5.8e-05  Score=47.50  Aligned_cols=48  Identities=13%  Similarity=0.098  Sum_probs=39.3

Q ss_pred             cEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEcc-CCCCHhHHHHHHHhcC
Q psy3969           4 PYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDIT-EPGKENEKEFMQQNSK   57 (86)
Q Consensus         4 ~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~-~~~d~~~r~~M~~~~g   57 (86)
                      +++|...-|+.      |.+|+++|+++||+|+.+|+- +|-+.+....+.+.+|
T Consensus         2 i~ly~~~~C~~------~rka~~~L~~~~i~~~~~d~~~~p~s~~eL~~ll~~~~   50 (114)
T d1z3ea1           2 VTLYTSPSCTS------CRKARAWLEEHEIPFVERNIFSEPLSIDEIKQILRMTE   50 (114)
T ss_dssp             EEEEECTTCHH------HHHHHHHHHHTTCCEEEEETTTSCCCHHHHHHHHHTCS
T ss_pred             EEEEcCCCCHH------HHHHHHHHHHCCCCeEEEeeeccCCCHHHHHHHHHHhc
Confidence            36888889988      999999999999999999994 3446666667777665

>d1k0da2 c.47.1.5 (A:109-200) Yeast prion protein ure2p, nitrogen regulation fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Yeast prion protein ure2p, nitrogen regulation fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.51  E-value=0.00021  Score=43.10  Aligned_cols=65  Identities=12%  Similarity=0.085  Sum_probs=47.0

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEe---C
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFN---E   77 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFi---g   77 (86)
                      |...++|....|+|      |.+++.+|+.+||+|+.+.|+-........+..+..          +..+||-+..   |
T Consensus         3 ~~~~tLY~~~~sp~------~~kV~~~L~e~gi~ye~~~v~~~~~~~~~~~~~~~n----------p~g~vP~L~d~~~~   66 (92)
T d1k0da2           3 LEGYTLFSHRSAPN------GFKVAIVLSELGFHYNTIFLDFNLGEHRAPEFVSVN----------PNARVPALIDHGMD   66 (92)
T ss_dssp             SSSEEEEECTTCHH------HHHHHHHHHHTTCCEEEEECCTTTTGGGSHHHHTTC----------TTCCSCEEEEGGGT
T ss_pred             CCceEEeeCCCCcc------HHHHHHHHHHcCCCCEEEEeeccCCcccCHHHHHHh----------hccccceeEEeccc
Confidence            56788999999999      999999999999999999886212222233444433          3458999975   5


Q ss_pred             Ceee
Q psy3969          78 EDYC   81 (86)
Q Consensus        78 d~yi   81 (86)
                      |.-+
T Consensus        67 ~~~l   70 (92)
T d1k0da2          67 NLSI   70 (92)
T ss_dssp             TEEE
T ss_pred             ceEE
Confidence            5544

>d1z9ha2 c.47.1.5 (A:100-212) Microsomal prostaglandin E synthase-2 {Crab-eating macaque (Macaca fascicularis) [TaxId: 9541]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Microsomal prostaglandin E synthase-2
species: Crab-eating macaque (Macaca fascicularis) [TaxId: 9541]

Probab=97.50  E-value=1.3e-05  Score=50.21  Aligned_cols=55  Identities=16%  Similarity=0.163  Sum_probs=41.8

Q ss_pred             CcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCC
Q psy3969           3 KPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEE   78 (86)
Q Consensus         3 ~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd   78 (86)
                      ++++|....|.+      |++|+.+|..|||+|+.++|+.    ..+.++ ...          +..+||.+..++
T Consensus         2 ~i~LY~~~~sP~------~~kvr~~L~~k~l~~~~~~v~~----~~~~~~-~~~----------~~~~vP~l~~~~   56 (113)
T d1z9ha2           2 QLTLYQYKTCPF------CSKVRAFLDFHALPYQVVEVNP----VLRAEI-KFS----------SYRKVPILVAQE   56 (113)
T ss_dssp             EEEEEECTTCHH------HHHHHHHHHHTTCCEEEEECCT----TTCGGG-TTC----------SCCSSCEEEEEE
T ss_pred             EEEEEcCCCChH------HHHHHHHHHHcCCeeEEeccCc----ccchhh-ccC----------cccccccccccc
Confidence            578999999999      9999999999999999999972    222222 112          345899998653

>d1r5aa2 c.47.1.5 (A:2-86) Class delta GST {Mosquito (Anopheles dirus b), isozyme 1-5 [TaxId: 123217]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class delta GST
species: Mosquito (Anopheles dirus b), isozyme 1-5 [TaxId: 123217]

Probab=97.42  E-value=0.00027  Score=42.07  Aligned_cols=63  Identities=8%  Similarity=-0.071  Sum_probs=46.9

Q ss_pred             cEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeeee
Q psy3969           4 PYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCG   82 (86)
Q Consensus         4 ~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yiG   82 (86)
                      +.+|....|++      |++++.+|+.+|++|+.+.|+-...+....++.+...          ..+||-+-.||..+.
T Consensus         2 ~iLY~~~~S~~------~~~v~~~l~e~gi~~e~~~v~~~~~~~~~~~~~~~nP----------~g~vP~L~~~~~~l~   64 (85)
T d1r5aa2           2 TVLYYLPASPP------CRSVLLLAKMIGVELDLKVLNIMEGEQLKPDFVELNP----------QHCIPTMDDHGLVLW   64 (85)
T ss_dssp             EEEEECTTCHH------HHHHHHHHHHTTCCEEEEECCTTTTGGGSHHHHTTCT----------TCCSSEEEETTEEEE
T ss_pred             EEEEcCCCCHh------HHHHHHHHHHcCCCCEEEEecCCCcccCCHHHHHHHh----------cCCCCEEEEccccee
Confidence            46899999988      9999999999999999988862133444556665543          347998887776654

>d1b48a2 c.47.1.5 (A:2-79) Class alpha GST {Mouse (Mus musculus), (a1-4) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class alpha GST
species: Mouse (Mus musculus), (a1-4) [TaxId: 10090]

Probab=97.41  E-value=0.00012  Score=42.95  Aligned_cols=64  Identities=16%  Similarity=0.119  Sum_probs=46.4

Q ss_pred             CCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeee
Q psy3969           2 KKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYC   81 (86)
Q Consensus         2 ~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yi   81 (86)
                      +||.+||-..+|.      |+.++.+|..+||+|+.+.++  ... ...+......        ++...+|-+-.||..+
T Consensus         2 ~K~kL~yf~~~~~------~~~vR~~L~~~gi~ye~~~~~--~~~-~~~~~~~~~~--------~p~g~lPvL~~~g~~l   64 (78)
T d1b48a2           2 AKPKLYYFNGRGR------MESIRWLLAAAGVEFEEEFLE--TRE-QYEKMQKDGH--------LLFGQVPLVEIDGMML   64 (78)
T ss_dssp             CCCEEEBCSSCTT------THHHHHHHHHHTCCCCCCBCC--CHH-HHHHHHTTTC--------SSSSCSCEEEETTEEE
T ss_pred             CCcEEEEcCCchH------HHHHHHHHHHcCCCcEEEEEc--chh-hhcchhhccc--------ccCCCCCEEEeCCeEE
Confidence            6899999889888      999999999999999998887  222 2222222221        2344789888887765


Q ss_pred             e
Q psy3969          82 G   82 (86)
Q Consensus        82 G   82 (86)
                      .
T Consensus        65 ~   65 (78)
T d1b48a2          65 T   65 (78)
T ss_dssp             C
T ss_pred             E
Confidence            4

>d1axda2 c.47.1.5 (A:1-80) Class phi GST {Maize (Zea mays), type I [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class phi GST
species: Maize (Zea mays), type I [TaxId: 4577]

Probab=97.41  E-value=0.00018  Score=42.46  Aligned_cols=63  Identities=13%  Similarity=0.058  Sum_probs=46.6

Q ss_pred             cEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeeee
Q psy3969           4 PYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCG   82 (86)
Q Consensus         4 ~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yiG   82 (86)
                      ..+|.+..|++      +.+++.+|+.+||+|+.+.|+-...+....+..+..          +..+||-+-.||..+.
T Consensus         3 ~~Ly~~~~S~~------~~kv~~~L~e~gi~~e~~~v~~~~~~~~~~~~~~~n----------P~g~VP~L~~~~~~l~   65 (80)
T d1axda2           3 MKLYGAVMSWN------LTRCATALEEAGSDYEIVPINFATAEHKSPEHLVRN----------PFGQVPALQDGDLYLF   65 (80)
T ss_dssp             EEEESCTTCTT------HHHHHHHHHHHTCCEEEECCCTTTTGGGSHHHHTTC----------TTCCSCEEEETTEEEE
T ss_pred             EEEEECCCChH------HHHHHHHHHHcCCCCEEEEecCCccchhhHHHHHhh----------ccccCCEEEECCEEEE
Confidence            46888899999      999999999999999998886322233344555544          2348999988876554

>d1gula2 c.47.1.5 (A:4-80) Class alpha GST {Human (Homo sapiens), (a1-1) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class alpha GST
species: Human (Homo sapiens), (a1-1) [TaxId: 9606]

Probab=97.38  E-value=0.00096  Score=38.66  Aligned_cols=63  Identities=11%  Similarity=0.043  Sum_probs=45.8

Q ss_pred             CcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeeee
Q psy3969           3 KPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCG   82 (86)
Q Consensus         3 ~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yiG   82 (86)
                      ||.+||-..+|.      +++++.+|...||+|+.+.++  . .+..........        ++...+|-+-.||.-+.
T Consensus         1 KpkL~yf~~~g~------~~~vR~~L~~~gi~ye~~~~~--~-~~~~~~~~~~~~--------~p~g~lPvL~~~g~~l~   63 (77)
T d1gula2           1 RPKLHYPNGRGR------MESVRWVLAAAGVEFDEEFLE--T-KEQLYKLQDGNH--------LLFQQVPMVEIDGMKLV   63 (77)
T ss_dssp             CCEEEEESSCTT------THHHHHHHHHTTCCCEEEEEC--S-HHHHHHHHHTTC--------STTSCSCEEEETTEEEE
T ss_pred             CCEEEEcCCcch------HHHHHHHHHHcCCCceEEeec--c-ccccchhhhccc--------CCCCCCCEEEECCEeee
Confidence            788999888888      899999999999999998886  2 333333332221        24457999888877553

>d1oyja2 c.47.1.5 (A:2-85) Class tau GST {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class tau GST
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=97.31  E-value=0.00028  Score=42.16  Aligned_cols=63  Identities=8%  Similarity=0.114  Sum_probs=46.1

Q ss_pred             CcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeeee
Q psy3969           3 KPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCG   82 (86)
Q Consensus         3 ~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yiG   82 (86)
                      ++.+|-...|.+      |++++..|..|||+|+.+.|+-  .. ..+++.+.+.         ...+||-+..||..+-
T Consensus         5 ~l~Ly~~~~Sp~------~~rvr~~L~~kgi~~e~~~v~~--~~-~~~~~~~~nP---------~~g~vP~L~~~g~~l~   66 (84)
T d1oyja2           5 ELVLLDFWVSPF------GQRCRIAMAEKGLEFEYREEDL--GN-KSDLLLRSNP---------VHRKIPVLLHAGRPVS   66 (84)
T ss_dssp             CEEEEECTTCHH------HHHHHHHHHHHTCCCEEEECCT--TS-CCHHHHHHST---------TTCCSCEEEETTEEEE
T ss_pred             ceEEEcCCCChH------HHHHHHHHHHcCCCcEEEEEcc--Cc-CCHHHHhhCC---------CcCcccEEEECCceEE
Confidence            467787778888      9999999999999999999862  21 2334455442         1137999999988765


Q ss_pred             c
Q psy3969          83 V   83 (86)
Q Consensus        83 g   83 (86)
                      +
T Consensus        67 e   67 (84)
T d1oyja2          67 E   67 (84)
T ss_dssp             S
T ss_pred             c
Confidence            4

>d2a2ra2 c.47.1.5 (A:1-77) Class pi GST {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class pi GST
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.27  E-value=0.00055  Score=39.52  Aligned_cols=62  Identities=11%  Similarity=-0.047  Sum_probs=42.9

Q ss_pred             cEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeeeec
Q psy3969           4 PYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCGV   83 (86)
Q Consensus         4 ~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yiGg   83 (86)
                      ..+||-..+|.      |+.++.+|..+||+|+.+.|+  ...  .........        ++...+|.+-.||..+..
T Consensus         3 ~~L~yf~~~g~------~~~vr~~L~~~gi~ye~~~v~--~~~--~~~~~~~~~--------~p~g~vP~L~~~g~~i~e   64 (77)
T d2a2ra2           3 YTVVYFPVRGR------CAALRMLLADQGQSWKEEVVT--VET--WQEGSLKAS--------CLYGQLPKFQDGDLTLYQ   64 (77)
T ss_dssp             EEEEECSSSGG------GHHHHHHHHHTTCCEEEEECC--HHH--HHHSHHHHH--------STTSCSCEEEETTEEEEC
T ss_pred             EEEEEcCCchh------HHHHHHHHHHcCCCcEEEEec--ccc--ccccccccc--------CCCCCCCEEEECCEeeec
Confidence            45677777777      999999999999999999997  222  222221111        122379999999987643

>d1aw9a2 c.47.1.5 (A:2-82) Class phi GST {Maize (Zea mays), type III [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class phi GST
species: Maize (Zea mays), type III [TaxId: 4577]

Probab=97.17  E-value=9.5e-05  Score=43.68  Aligned_cols=64  Identities=9%  Similarity=0.091  Sum_probs=45.8

Q ss_pred             cEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeeeec
Q psy3969           4 PYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCGV   83 (86)
Q Consensus         4 ~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yiGg   83 (86)
                      ..+|....|++      |++++.+|..+||+|+.+.|+-...+....++.+..          +..+||-+-.||..+..
T Consensus         3 m~Ly~~~~sp~------~~~v~~~l~e~gi~~e~~~v~~~~~~~~~~~~~~~n----------P~g~vP~L~~~~~~l~e   66 (81)
T d1aw9a2           3 LKLYGMPLSPN------VVRVATVLNEKGLDFEIVPVDLTTGAHKQPDFLALN----------PFGQIPALVDGDEVLFE   66 (81)
T ss_dssp             EEEESCTTCHH------HHHHHHHHHHTTCCEEEECCCSSTTSSCCCSGGGTC----------TTCCSCEEEETTEEEES
T ss_pred             EEEEeCCCChh------HHHHHHHHHhcCCCCEEEEecCCCcchhhHHHHHHh----------hcCeeEEEEECCcEEEC
Confidence            35788888888      999999999999999999886212222333444433          34489999888877653

>d1hyua4 c.47.1.2 (A:103-198) Alkyl hydroperoxide reductase subunit F (AhpF), N-terminal domain {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: PDI-like
domain: Alkyl hydroperoxide reductase subunit F (AhpF), N-terminal domain
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.14  E-value=0.00089  Score=40.16  Aligned_cols=57  Identities=19%  Similarity=0.060  Sum_probs=43.1

Q ss_pred             cEEEEEcccCchhchHHHHHHHHHHHh-----CCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCC
Q psy3969           4 PYKISNTVRGVKGVKKRQQRVLMILDS-----KNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEE   78 (86)
Q Consensus         4 ~~~y~ss~sgn~~vK~~q~~a~~lL~~-----k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd   78 (86)
                      +.+|+|+-|+.      |..+..+|+.     .+|.|..+|++  .+++..    ++.|  -+        .+|.||++|
T Consensus        19 i~~F~s~~C~~------C~~~~p~~~~~a~~~~~i~~~~vd~~--~~~~l~----~~~~--I~--------~vPt~~~ng   76 (96)
T d1hyua4          19 FETYYSLSCHN------CPDVVQALNLMAVLNPRIKHTAIDGG--TFQNEI----TERN--VM--------GVPAVFVNG   76 (96)
T ss_dssp             EEEEECTTCSS------HHHHHHHHHHHHHHCTTEEEEEEETT--TCHHHH----HHTT--CC--------SSSEEEETT
T ss_pred             EEEEECCCCcc------hHHHHHHHHHHHHhCCceEEEEEecc--cchHHH----hhcc--cc--------cccEEEECC
Confidence            56799999999      8888777764     36889999998  666543    3444  33        699999999


Q ss_pred             eeee
Q psy3969          79 DYCG   82 (86)
Q Consensus        79 ~yiG   82 (86)
                      +.++
T Consensus        77 ~~~~   80 (96)
T d1hyua4          77 KEFG   80 (96)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            8775

>d1jlva2 c.47.1.5 (A:1-84) Class delta GST {Mosquito (Anopheles dirus b), isozyme 1-3 [TaxId: 123217]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class delta GST
species: Mosquito (Anopheles dirus b), isozyme 1-3 [TaxId: 123217]

Probab=97.13  E-value=0.00072  Score=40.14  Aligned_cols=61  Identities=8%  Similarity=-0.092  Sum_probs=44.9

Q ss_pred             EEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeee
Q psy3969           5 YKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYC   81 (86)
Q Consensus         5 ~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yi   81 (86)
                      .+|+...|++      |++++.+|+.+||+|+.+.|+-...+....++.+...          ..+||-+-.||..+
T Consensus         2 kLY~~~~S~~------~~~v~~~l~e~gi~~e~~~v~~~~~~~~~~~~~~~nP----------~g~vP~L~d~~~~l   62 (84)
T d1jlva2           2 DFYYLPGSAP------CRAVQMTAAAVGVELNLKLTNLMAGEHMKPEFLKINP----------QHCIPTLVDNGFAL   62 (84)
T ss_dssp             EEEECTTCHH------HHHHHHHHHHTTCCCEEEECCGGGTGGGSHHHHHHCT----------TCCSCEEEETTEEE
T ss_pred             EEEcCCCCHH------HHHHHHHHHHcCCCCEEEEecCCCCccCCHHHHHHhc----------cccCCEEEECCEEE
Confidence            5788888888      9999999999999999988852122333446666553          33799887777654

>d1rw1a_ c.47.1.12 (A:) Hypothetical protein PA3664 (YffB) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: ArsC-like
domain: Hypothetical protein PA3664 (YffB)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.12  E-value=0.00026  Score=44.20  Aligned_cols=48  Identities=8%  Similarity=-0.028  Sum_probs=36.7

Q ss_pred             cEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEcc-CCCCHhHHHHHHHhcC
Q psy3969           4 PYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDIT-EPGKENEKEFMQQNSK   57 (86)
Q Consensus         4 ~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~-~~~d~~~r~~M~~~~g   57 (86)
                      .+||-..-|+.      |.+|+++|+.+||+|+.+|+- +|-+.+....+.++.|
T Consensus         2 ~~iY~~p~Cs~------srka~~~L~~~~i~~~~idy~k~pls~~eL~~ll~~~g   50 (114)
T d1rw1a_           2 YVLYGIKACDT------MKKARTWLDEHKVAYDFHDYKAVGIDREHLRRWCAEHG   50 (114)
T ss_dssp             EEEEECSSCHH------HHHHHHHHHHTTCCEEEEEHHHHCCCHHHHHHHHHHHC
T ss_pred             EEEEECCCChH------HHHHHHHHHHcCCCeEEEEccccCCCHHHHHHHHHhcc
Confidence            35777788887      999999999999999999993 2345555555665554

>d1eema2 c.47.1.5 (A:5-102) Class omega GST {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class omega GST
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.09  E-value=0.00033  Score=42.89  Aligned_cols=62  Identities=19%  Similarity=0.180  Sum_probs=45.0

Q ss_pred             CcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCC-eee
Q psy3969           3 KPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEE-DYC   81 (86)
Q Consensus         3 ~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd-~yi   81 (86)
                      +..+|....|.+      |++|+.+|..|||+|+.+.|+-..   ..+++.+..          +..+||-+..+| ..+
T Consensus        19 ~~~Ly~~~~sP~------~~rv~~~l~~kgi~~e~~~v~~~~---~~~~~~~~n----------P~g~VPvL~~~dg~~i   79 (98)
T d1eema2          19 SIRIYSMRFCPF------AERTRLVLKAKGIRHEVININLKN---KPEWFFKKN----------PFGLVPVLENSQGQLI   79 (98)
T ss_dssp             CEEEEECTTCHH------HHHHHHHHHHTTCCEEEEEBCTTS---CCGGGGGTC----------TTCCSCEEEETTCCEE
T ss_pred             cEEEEcCCCChH------HHHHHHHHHHhCCCCEEEEecccC---CcHHHHhhh----------ccccceeEEeCCCCEE
Confidence            467888888888      999999999999999998886211   123344433          334899998865 566


Q ss_pred             ec
Q psy3969          82 GV   83 (86)
Q Consensus        82 Gg   83 (86)
                      .+
T Consensus        80 ~e   81 (98)
T d1eema2          80 YE   81 (98)
T ss_dssp             ES
T ss_pred             cC
Confidence            43

>d1k3ya2 c.47.1.5 (A:2-80) Class alpha GST {Human (Homo sapiens), (a1-1) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class alpha GST
species: Human (Homo sapiens), (a1-1) [TaxId: 9606]

Probab=97.08  E-value=0.0021  Score=37.55  Aligned_cols=64  Identities=11%  Similarity=0.071  Sum_probs=47.6

Q ss_pred             CCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeee
Q psy3969           2 KKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYC   81 (86)
Q Consensus         2 ~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yi   81 (86)
                      .||.+||=..+|.      ++.++.+|...||+|+++.+.   ..+...+......        ++...+|-+-.||.-+
T Consensus         2 ~k~kL~Yf~~~gr------ae~irl~L~~~gv~yed~~~~---~~~~~~~~~~~~~--------~p~g~lPvl~~~g~~l   64 (79)
T d1k3ya2           2 EKPKLHYFNARGR------MESTRWLLAAAGVEFEEKFIK---SAEDLDKLRNDGY--------LMFQQVPMVEIDGMKL   64 (79)
T ss_dssp             CCCEEEEESSSTT------THHHHHHHHHHTCCCEEEEEC---SHHHHHHHHHTTC--------CTTSCSCEEEETTEEE
T ss_pred             CCcEEEEcCCcHH------HHHHHHHHHHcCCCceEEEec---chhhhhhhccccc--------CCCCCCCEEEECCeEE
Confidence            4889988888888      899999999999999999987   3444444444332        2345799888887655


Q ss_pred             e
Q psy3969          82 G   82 (86)
Q Consensus        82 G   82 (86)
                      .
T Consensus        65 ~   65 (79)
T d1k3ya2          65 V   65 (79)
T ss_dssp             E
T ss_pred             E
Confidence            3

>d2cvda2 c.47.1.5 (A:2-75) Class sigma GST {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class sigma GST
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.05  E-value=0.0019  Score=37.28  Aligned_cols=59  Identities=12%  Similarity=-0.005  Sum_probs=43.9

Q ss_pred             cEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeeee
Q psy3969           4 PYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCG   82 (86)
Q Consensus         4 ~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yiG   82 (86)
                      ..+||--.+|.      |+.++.+|..+||+|+++.+.    .....+..+..          +...+|-+-.||.-+.
T Consensus         3 ~kL~yf~~~~~------~~~vRl~L~~~gi~~e~~~~~----~~~~~~~~~~~----------p~g~vP~L~~~g~~l~   61 (74)
T d2cvda2           3 YKLTYFNMRGR------AEIIRYIFAYLDIQYEDHRIE----QADWPEIKSTL----------PFGKIPILEVDGLTLH   61 (74)
T ss_dssp             EEEEEESSSGG------GHHHHHHHHHTTCCCEEEEEC----GGGHHHHHTTS----------TTSCSCEEEETTEEEE
T ss_pred             EEEEEcCCcHH------HHHHHHHHHHcCCCCEecccc----cccchhhcccC----------CCCCcCEEEECCEEEE
Confidence            35677777777      999999999999999999997    23344444433          3347999998887654

>d1gnwa2 c.47.1.5 (A:2-85) Class phi GST {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class phi GST
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.88  E-value=0.00051  Score=40.67  Aligned_cols=63  Identities=17%  Similarity=0.180  Sum_probs=44.9

Q ss_pred             cEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeeee
Q psy3969           4 PYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCG   82 (86)
Q Consensus         4 ~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yiG   82 (86)
                      ..+|....|.+      |+++..+|..+||+|+.+.|+-...+....+..+..          +..+||-+-.||..+-
T Consensus         2 ~kLY~~~~s~~------~~~v~~~l~e~gl~~e~~~v~~~~~~~~~~~~~~~n----------P~g~vP~L~~~~~~l~   64 (84)
T d1gnwa2           2 IKVFGHPASIA------TRRVLIALHEKNLDFELVHVELKDGEHKKEPFLSRN----------PFGQVPAFEDGDLKLF   64 (84)
T ss_dssp             EEEEECTTCHH------HHHHHHHHHHTTCCCEEEECCGGGTGGGSTTGGGTC----------TTCCSCEEEETTEEEE
T ss_pred             eEEEeCCCChH------HHHHHHHHHHcCCCcEeecccCCcccccHHHHHHHh----------hcCcceEEEECCcEEe
Confidence            35788888888      999999999999999988875212222233444433          3448999998887664

>d1j9ba_ c.47.1.12 (A:) Arsenate reductase ArsC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: ArsC-like
domain: Arsenate reductase ArsC
species: Escherichia coli [TaxId: 562]

Probab=96.87  E-value=0.00064  Score=44.08  Aligned_cols=48  Identities=15%  Similarity=0.142  Sum_probs=39.9

Q ss_pred             cEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEcc-CCCCHhHHHHHHHhcC
Q psy3969           4 PYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDIT-EPGKENEKEFMQQNSK   57 (86)
Q Consensus         4 ~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~-~~~d~~~r~~M~~~~g   57 (86)
                      ++||...-|+.      |.+|+.+|+++||+|+.+|+- +|-+.+....+.+..|
T Consensus         2 i~iY~~p~Cs~------srkal~~L~~~~i~~~~idy~k~pls~~eL~~ll~~lg   50 (138)
T d1j9ba_           2 ITIYHNPACGT------SRNTLEMIRNSGTEPTIILYLENPPSRDELVKLIADMG   50 (138)
T ss_dssp             CEEECCTTCHH------HHHHHHHHHHTTCCCEEECTTTSCCCHHHHHHHHHHHT
T ss_pred             eEEEECCCCHH------HHHHHHHHHHCCCCeEEEeeccCCCCHHHHHHHHHHcc
Confidence            67888888888      999999999999999999984 3456667777777766

>d1tw9a2 c.47.1.5 (A:1-77) Class sigma GST {Heligmosomoides polygyrus [TaxId: 6339]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class sigma GST
species: Heligmosomoides polygyrus [TaxId: 6339]

Probab=96.72  E-value=0.003  Score=36.81  Aligned_cols=62  Identities=10%  Similarity=0.007  Sum_probs=46.3

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCee
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDY   80 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~y   80 (86)
                      |.+..++|-.++|.      ++.++.+|...||+|+++.+.    .+...+.....          +...+|-+..||.-
T Consensus         1 M~~~kL~Yf~~~gr------~e~vR~~L~~~gi~ye~~~~~----~~~~~~~~~~~----------p~g~lPvL~~~g~~   60 (77)
T d1tw9a2           1 MVHYKLTYFNGRGA------GECARQVFALADQKYEDVRLT----QETFVPLKATF----------PFGQVPVLEVDGQQ   60 (77)
T ss_dssp             CCCEEEEEESSSGG------GHHHHHHHHHTTCCCEEEEEC----HHHHGGGGGGS----------TTSCSCEEEETTEE
T ss_pred             CCCeEEEECCCchH------HHHHHHHHHHcCCCceeeecc----cccchhhhhhc----------ccCCCCEEEECCEE
Confidence            77888877777776      999999999999999999986    33333333332          33479999998876


Q ss_pred             ee
Q psy3969          81 CG   82 (86)
Q Consensus        81 iG   82 (86)
                      +.
T Consensus        61 i~   62 (77)
T d1tw9a2          61 LA   62 (77)
T ss_dssp             EE
T ss_pred             EE
Confidence            54

>d1k0ma2 c.47.1.5 (A:6-91) Chloride intracellular channel 1 (clic1) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Chloride intracellular channel 1 (clic1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.59  E-value=0.0017  Score=38.75  Aligned_cols=67  Identities=15%  Similarity=0.102  Sum_probs=45.7

Q ss_pred             CcEEEEEcccCchhchH---HHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCe
Q psy3969           3 KPYKISNTVRGVKGVKK---RQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEED   79 (86)
Q Consensus         3 ~~~~y~ss~sgn~~vK~---~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~   79 (86)
                      .+++|+...+ +-+-..   -|+|++.+|..|||+|+.+.|+.  . ...+++.+.++          ...||-+-.||.
T Consensus         2 ~i~l~~ka~~-dg~~~~~cPf~~rv~~~L~~kgi~~~~~~v~~--~-~~~~~~~~~nP----------~~~vPvL~~~~~   67 (86)
T d1k0ma2           2 QVELFVKAGS-DGAKIGNCPFSQRLFMVLWLKGVTFNVTTVDT--K-RRTETVQKLCP----------GGELPFLLYGTE   67 (86)
T ss_dssp             CEEEEEEBCT-TSSSBCSCHHHHHHHHHHHHHTCCCEEEEECT--T-SCCHHHHHHCT----------TCCSSEEEETTE
T ss_pred             cEEEEEecCC-CcCcCCCCHhHHHHHHHHHHHCCCcEEEEeec--c-cccHHHHHHhc----------cCceeEEEEccc
Confidence            3577876643 222212   27999999999999999998862  2 12345666664          237999999988


Q ss_pred             eeec
Q psy3969          80 YCGV   83 (86)
Q Consensus        80 yiGg   83 (86)
                      .+.+
T Consensus        68 ~i~e   71 (86)
T d1k0ma2          68 VHTD   71 (86)
T ss_dssp             EEEC
T ss_pred             cccc
Confidence            7754

>d2fnoa2 c.47.1.5 (A:1-87) Hypothetical protein AGR_pAT_752p/Atu5508 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Hypothetical protein AGR pAT 752p/Atu5508
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=96.30  E-value=0.00078  Score=40.21  Aligned_cols=61  Identities=15%  Similarity=0.012  Sum_probs=43.5

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeC
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNE   77 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFig   77 (86)
                      |.++.+||--++|.      +++++.+|..+|++|+.+.++  .....+.....+.        .++...+|-+..+
T Consensus         5 M~~~~L~Y~~~~g~------~e~vRl~L~~~g~~ye~~~~~--~~~~~~~~~~~~~--------~~p~~~~P~l~~~   65 (87)
T d2fnoa2           5 MNTFDLYYWPVPFR------GQLIRGILAHCGCSWDEHDVD--AIEGLMDCGAEKQ--------PVAFMGPPVLIDR   65 (87)
T ss_dssp             CBSEEEECCSSSST------THHHHHHHHHTTCCEECCCHH--HHHHHHHSCGGGS--------SSCCSSSCEEEET
T ss_pred             CCCeEEEECCCCcc------hHHHHHHHHHHhCcceeeccc--hhHHHHHhhcccc--------cCCCCCCCEEEec
Confidence            78899999988888      999999999999999988876  2222222111111        1456688988774

>d1okta2 c.47.1.5 (A:1-85) Pf GST {Malarial parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Pf GST
species: Malarial parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=96.30  E-value=0.015  Score=33.60  Aligned_cols=64  Identities=11%  Similarity=0.025  Sum_probs=44.7

Q ss_pred             CcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHH---HHhcCCCCCCCCCCCCCCCCeEEeCCe
Q psy3969           3 KPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFM---QQNSKATPSDSTVKSNPLPPQIFNEED   79 (86)
Q Consensus         3 ~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M---~~~~g~~~~~~~~~~~~tvPQIFigd~   79 (86)
                      |+.+||-.++|.      ++.++.+|+..||+|+.+.++  -++..+...   ..+..        ++...+|-+-.||.
T Consensus         4 ~i~L~Y~~~~gr------~e~irl~L~~~gi~ye~~~~~--~~~~~~~~~~~~~~~~~--------~p~g~lP~l~~~g~   67 (85)
T d1okta2           4 NIVLYYFDARGK------AELIRLIFAYLGIEYTDKRFG--VNGDAFVEFKNFKKEKD--------TPFEQVPILQIGDL   67 (85)
T ss_dssp             CEEEEEESSSTT------THHHHHHHHHHTCCCEEEEET--SSSCHHHHHHHHHHHSC--------CSSSCSCEEEETTE
T ss_pred             CeEEEEcCCchh------hHHHHHHHHHcCCCceEEEEc--ccccchhhhhhhhhccc--------ccCCCCCeeecCCC
Confidence            477777777776      899999999999999999887  333323322   22221        23458999998887


Q ss_pred             eee
Q psy3969          80 YCG   82 (86)
Q Consensus        80 yiG   82 (86)
                      -+.
T Consensus        68 ~l~   70 (85)
T d1okta2          68 ILA   70 (85)
T ss_dssp             EEE
T ss_pred             EEe
Confidence            654

>d2gsqa2 c.47.1.5 (A:1-75) Class sigma GST {Squid (Ommastrephes sloani pacificus) [TaxId: 6634]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class sigma GST
species: Squid (Ommastrephes sloani pacificus) [TaxId: 6634]

Probab=96.15  E-value=0.0087  Score=34.44  Aligned_cols=59  Identities=7%  Similarity=-0.041  Sum_probs=42.5

Q ss_pred             cEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeeee
Q psy3969           4 PYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCG   82 (86)
Q Consensus         4 ~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yiG   82 (86)
                      -.+||--++|.      ++.++.+|..+||+|+.+.+.    .+...+..+...          ...+|-+-.||.-+.
T Consensus         3 ~~L~yf~~~g~------~~~iRl~L~~~gi~ye~~~~~----~~~~~~~~~~~p----------~g~lPvL~~~g~~i~   61 (75)
T d2gsqa2           3 YTLHYFPLMGR------AELCRFVLAAHGEEFTDRVVE----MADWPNLKATMY----------SNAMPVLDIDGTKMS   61 (75)
T ss_dssp             EEEEECSSSGG------GHHHHHHHHHTTCCCEEEECC----TTTHHHHGGGSG----------GGSSCEEEETTEEEC
T ss_pred             EEEEecCCchh------HHHHHHHHHHcCCCchhhccc----cccchhhhhccc----------cCCcCEEEECCeeee
Confidence            35666667776      999999999999999999987    233444444432          237999988886553

>d1duga2 c.47.1.5 (A:1-80) Class alpha GST {Schistosoma japonicum [TaxId: 6182]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class alpha GST
species: Schistosoma japonicum [TaxId: 6182]

Probab=96.09  E-value=0.013  Score=33.83  Aligned_cols=64  Identities=11%  Similarity=0.035  Sum_probs=42.3

Q ss_pred             cEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeeee
Q psy3969           4 PYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCG   82 (86)
Q Consensus         4 ~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yiG   82 (86)
                      |++||=.+.|-      ++.++.+|+..||+|+++.|+. .+.+.+.....+..        ++...+|-+-.||..+.
T Consensus         2 P~L~Y~~~rgr------ae~vRl~L~~~gi~ye~~~~~~-~~~~~~~~~~~~~~--------~p~~~lP~l~d~g~~l~   65 (80)
T d1duga2           2 PILGYWKIKGL------VQPTRLLLEYLEEKYEEHLYER-DEGDKWRNKKFELG--------LEFPNLPYYIDGDVKLT   65 (80)
T ss_dssp             CEEEEESSSGG------GHHHHHHHHHHTCCCEEEEECT-TCHHHHHHHTTSSC--------CSSCCSSEEECSSCEEE
T ss_pred             CEEEEcCCchh------hHHHHHHHHHcCCCceEEEEec-ccccccchhhhhcc--------CCCcccceeccCCeeeh
Confidence            55666556555      8899999999999999999872 23333332222221        24558999987776553

>d1tu7a2 c.47.1.5 (A:1-77) Class pi GST {Onchocerca volvulus [TaxId: 6282]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class pi GST
species: Onchocerca volvulus [TaxId: 6282]

Probab=95.86  E-value=0.0099  Score=34.35  Aligned_cols=59  Identities=10%  Similarity=0.169  Sum_probs=42.4

Q ss_pred             EEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeeeec
Q psy3969           5 YKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCGV   83 (86)
Q Consensus         5 ~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yiGg   83 (86)
                      .+||-.++|.      ++.++.+|..+||+|+.+.+.    .....+..+..          +...+|-+-.||..+..
T Consensus         4 kL~Yf~~~g~------~e~iRl~L~~~gi~~e~~~~~----~~~~~~~~~~~----------p~g~lPvL~~~~~~l~q   62 (77)
T d1tu7a2           4 KLTYFSIRGL------AEPIRLFLVDQDIKFIDDRIA----KDDFSSIKSQF----------QFGQLPCLYDGDQQIVQ   62 (77)
T ss_dssp             EEEEESSSGG------GHHHHHHHHHTTCCCEEEEEC----GGGSTTTGGGS----------TTSCSCEEEETTEEEES
T ss_pred             EEEecCCcHH------HHHHHHHHHHcCCCceeeecc----cccchhhcccC----------CCCCCCEEEECCEEEEc
Confidence            4666667777      999999999999999998886    22222333332          33479999999987753

>d1m0ua2 c.47.1.5 (A:47-122) Class sigma GST {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class sigma GST
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=95.72  E-value=0.018  Score=33.26  Aligned_cols=58  Identities=10%  Similarity=0.105  Sum_probs=42.1

Q ss_pred             EEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeeee
Q psy3969           5 YKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCG   82 (86)
Q Consensus         5 ~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yiG   82 (86)
                      .+||-.++|.      ++.++.+|...||+|+.+.++    .+.+.++.+..          +...+|-+-.||.-+.
T Consensus         5 kL~Yf~~~g~------~e~iRl~L~~~gi~yed~~~~----~~~~~~~~~~~----------p~g~lP~l~~~g~~l~   62 (76)
T d1m0ua2           5 TLFYFNVKAL------AEPLRYLFAYGNQEYEDVRVT----RDEWPALKPTM----------PMGQMPVLEVDGKRVH   62 (76)
T ss_dssp             EEEEESSSGG------GHHHHHHHHHHTCCCEEEEEC----TTTHHHHGGGS----------GGGCSCEEEETTEEEE
T ss_pred             EEEecCCchH------HHHHHHHHHHcCCCCEEecCC----hhhhhhhhccC----------cCCCCcEEEECCcccc
Confidence            4566567775      889999999999999999887    23344444443          2337999999887664

>d1iloa_ c.47.1.1 (A:) MTH985, a thioredoxin {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: MTH985, a thioredoxin
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=95.62  E-value=0.019  Score=34.17  Aligned_cols=61  Identities=11%  Similarity=0.010  Sum_probs=40.6

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCee
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDY   80 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~y   80 (86)
                      |.++.|+ ++-|++.  ++--+.+++.++..||+.+...|+   |..   ++.+ -|  -.        ++|-+.|||+.
T Consensus         1 Mm~IkVl-g~gC~~C--~~~~~~v~~a~~e~gi~a~v~kv~---d~~---ei~~-yg--Vm--------stPalvIdg~v   60 (77)
T d1iloa_           1 MMKIQIY-GTGCANC--QMLEKNAREAVKELGIDAEFEKIK---EMD---QILE-AG--LT--------ALPGLAVDGEL   60 (77)
T ss_dssp             CEEEEEE-CSSSSTT--HHHHHHHHHHHHHTTCCEEEEEEC---SHH---HHHH-HT--CS--------SSSCEEETTEE
T ss_pred             CcEEEEe-CCCCccH--HHHHHHHHHHHHHcCCceEEEEeC---CHH---HHHH-cC--Cc--------CCCEEEECCEE
Confidence            7889998 6677771  111224455578899999999997   332   2333 34  22        67999999986


Q ss_pred             e
Q psy3969          81 C   81 (86)
Q Consensus        81 i   81 (86)
                      +
T Consensus        61 v   61 (77)
T d1iloa_          61 K   61 (77)
T ss_dssp             E
T ss_pred             E
Confidence            4

>d1nhoa_ c.47.1.1 (A:) MTH807, thioredoxin/glutaredoxin-like protein {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: MTH807, thioredoxin/glutaredoxin-like protein
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=95.28  E-value=0.0084  Score=34.54  Aligned_cols=61  Identities=15%  Similarity=0.117  Sum_probs=41.5

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHh------CCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeE
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDS------KNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQI   74 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~------k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQI   74 (86)
                      |.++.+|+|+-|+.      |.++...|+.      -++.|..+|++  .+++.    .++.|  -        ..+|.+
T Consensus         2 ~v~v~~F~a~wC~~------C~~~~p~~~~l~~~~~~~v~~~~vd~d--~~~~l----~~~~~--V--------~~~Pt~   59 (85)
T d1nhoa_           2 VVNIEVFTSPTCPY------CPMAIEVVDEAKKEFGDKIDVEKIDIM--VDREK----AIEYG--L--------MAVPAI   59 (85)
T ss_dssp             CCCEEEESCSSSCC------STTHHHHHHHHHHHHCSSCCEEEECTT--TCGGG----GGGTC--S--------SCSSEE
T ss_pred             EEEEEEEECCCCcc------hHHHHHHHhhhcccccccccccccccc--cchhh----HHhcC--c--------eEeCEE
Confidence            57889999999998      6666655543      34888889987  56653    33333  2        268899


Q ss_pred             EeCCe--eeec
Q psy3969          75 FNEED--YCGV   83 (86)
Q Consensus        75 Figd~--yiGg   83 (86)
                      |++++  |.|.
T Consensus        60 ~~~~~~~~~G~   70 (85)
T d1nhoa_          60 AINGVVRFVGA   70 (85)
T ss_dssp             EETTTEEEECS
T ss_pred             EECCcEEEEcC
Confidence            98854  4554

>d1fhea2 c.47.1.5 (A:1-80) Class alpha GST {Fasciola hepatica [TaxId: 6192]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class alpha GST
species: Fasciola hepatica [TaxId: 6192]

Probab=94.66  E-value=0.052  Score=31.09  Aligned_cols=57  Identities=16%  Similarity=0.114  Sum_probs=37.2

Q ss_pred             cccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeee
Q psy3969          10 TVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYC   81 (86)
Q Consensus        10 s~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yi   81 (86)
                      .+.|.      ++.++.+|...||+|+.+.++. .+.+.+.....+.+        ++...+|-+-.||..+
T Consensus         8 ~~rgr------ae~iRl~L~~~gv~ye~~~~~~-~~~~~~~~~~~~~~--------~p~~~~P~l~~~g~~l   64 (80)
T d1fhea2           8 KLRGL------AQPVRLFLEYLGEEYEEHLYGR-DDREKWMSEKFNMG--------LDLPNLPYYIDDKCKL   64 (80)
T ss_dssp             SSCTT------THHHHHHHHHTTCCCEEEEECS-TTSHHHHTTTTTSC--------CSSCCSSEEECSSCEE
T ss_pred             CCchH------HHHHHHHHHHcCCCCEEEEecc-ccchhcchhhhhcc--------CCCcceeeeecCCeEE
Confidence            46665      8899999999999999999972 12332332222221        3456789877666544

>d2c4ja2 c.47.1.5 (A:2-85) Class mu GST {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class mu GST
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.52  E-value=0.24  Score=28.04  Aligned_cols=65  Identities=14%  Similarity=0.122  Sum_probs=40.5

Q ss_pred             EEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeCCeeee
Q psy3969           7 ISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNEEDYCG   82 (86)
Q Consensus         7 y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFigd~yiG   82 (86)
                      |+ .+.|.      ++.++.+|...||+|+.+.++-.........+.....  .+  ..++...+|-+-.||..+.
T Consensus         6 Y~-~~~g~------~~~vR~~L~~~gi~ye~~~~~~~~~~~~~~~~~~~~~--~~--~~~p~~~lP~L~~~g~~l~   70 (84)
T d2c4ja2           6 YW-NIRGL------AHSIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLNEK--FK--LGLDFPNLPYLIDGTHKIT   70 (84)
T ss_dssp             EE-SSSGG------GHHHHHHHHHTTCCEEEEEECCCCTTTTCCHHHHTTT--TS--SCCSSCCSSEEEETTEEEE
T ss_pred             EC-CCchh------hHHHHHHHHHcCCCceEEEEccccccccchHHHhhhh--hh--ccCCCCCCCEEEECCEEEe
Confidence            44 46665      8999999999999999999972112222222222211  00  1245668999988887664

>d1pmta2 c.47.1.5 (A:1-80) Class beta GST {Proteus mirabilis [TaxId: 584]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class beta GST
species: Proteus mirabilis [TaxId: 584]

Probab=92.91  E-value=0.035  Score=31.87  Aligned_cols=59  Identities=12%  Similarity=0.111  Sum_probs=35.6

Q ss_pred             EEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHH-HHHHHhcCCCCCCCCCCCCCCCCeEEeCC-eee
Q psy3969           6 KISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEK-EFMQQNSKATPSDSTVKSNPLPPQIFNEE-DYC   81 (86)
Q Consensus         6 ~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r-~~M~~~~g~~~~~~~~~~~~tvPQIFigd-~yi   81 (86)
                      +|++..| +      ..++..+|..+||+|+.+.|+-...++.+ .+..+.          |+..+||-+-.+| ..+
T Consensus         3 LY~~p~s-~------s~~vr~~L~e~gi~~e~~~v~~~~~~~~~~~~~~~~----------nP~g~vP~L~~~~g~~l   63 (80)
T d1pmta2           3 LYYTPGS-C------SLSPHIVLRETGLDFSIERIDLRTKKTESGKDFLAI----------NPKGQVPVLQLDNGDIL   63 (80)
T ss_dssp             EEECTTS-T------THHHHHHHHHTTCCCEEEEEETTTTEETTSCBGGGT----------CTTCCSCEEECTTSCEE
T ss_pred             EEeCCCC-h------HHHHHHHHHHhCCCCEEEEEecCCCcccCCHHHHHh----------cccccCCceecCCCcEE
Confidence            6765544 3      46899999999999997777521122222 122222          2455899887654 443

>d1n2aa2 c.47.1.5 (A:1-80) Class beta GST {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class beta GST
species: Escherichia coli [TaxId: 562]

Probab=91.80  E-value=0.071  Score=30.41  Aligned_cols=60  Identities=10%  Similarity=0.051  Sum_probs=36.2

Q ss_pred             EEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhH-HHHHHHhcCCCCCCCCCCCCCCCCeEEeCC-eee
Q psy3969           5 YKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENE-KEFMQQNSKATPSDSTVKSNPLPPQIFNEE-DYC   81 (86)
Q Consensus         5 ~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~-r~~M~~~~g~~~~~~~~~~~~tvPQIFigd-~yi   81 (86)
                      .+|++..|.+       .++..+|..+|++|+.+.|.-...+.. ..+..+..          +...||-+-.+| ..+
T Consensus         2 kLY~~p~s~s-------~~v~~~l~e~gi~~e~~~v~~~~~~~~~~~~~~~~n----------P~g~vP~L~~~dg~~l   63 (80)
T d1n2aa2           2 KLFYKPGACS-------LASHITLRESGKDFTLVSVDLMKKRLENGDDYFAVN----------PKGQVPALLLDDGTLL   63 (80)
T ss_dssp             EEEECTTSTT-------HHHHHHHHHTTCCCEEEEEETTTTEETTCCBGGGTC----------TTCCSCEEECTTSCEE
T ss_pred             EEEeCCCccH-------HHHHHHHHHhCCCCEEEEEcCCCCcccCCHHHHHHh----------cccceeeEEecCCCEE
Confidence            3576654433       578899999999998877741122211 22333333          345899887654 554

>d1a8la2 c.47.1.2 (A:120-226) Protein disulfide isomerase, PDI {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: PDI-like
domain: Protein disulfide isomerase, PDI
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=90.06  E-value=0.43  Score=27.40  Aligned_cols=35  Identities=3%  Similarity=-0.089  Sum_probs=25.4

Q ss_pred             EEEEEcccCchhchHHHHHHHHHHHh----------CCCceEEEEccCCCCHh
Q psy3969           5 YKISNTVRGVKGVKKRQQRVLMILDS----------KNIDYTVIDITEPGKEN   47 (86)
Q Consensus         5 ~~y~ss~sgn~~vK~~q~~a~~lL~~----------k~I~f~eiDI~~~~d~~   47 (86)
                      .+|+|+-||.      |.+++.+|+.          ..|.+..||+.  ..++
T Consensus        20 ~~F~a~wC~~------C~~~~p~~~~la~~~~~~~~~~v~~~~id~~--~~~~   64 (107)
T d1a8la2          20 LVFVTPTCPY------CPLAVRMAHKFAIENTKAGKGKILGDMVEAI--EYPE   64 (107)
T ss_dssp             EEEECSSCTT------HHHHHHHHHHHHHHHHHTTCCCEEEEEEEGG--GCHH
T ss_pred             EEEEcCcccc------chhhChhHHhhhhhhhhccCCcEEEEEeccc--cccc
Confidence            3588999999      7777766653          24788888887  5554

>d1nhya2 c.47.1.5 (A:1-75) GST-like domain of elongation factor 1-gamma {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: GST-like domain of elongation factor 1-gamma
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=89.51  E-value=0.43  Score=27.16  Aligned_cols=55  Identities=15%  Similarity=0.102  Sum_probs=38.5

Q ss_pred             CCCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCCeEEeC
Q psy3969           1 MKKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIFNE   77 (86)
Q Consensus         1 ~~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvPQIFig   77 (86)
                      |++.++|.+- +      -+-.++..+|+.+|++|+.++..  .   ..+++.+...          ..+||-+=.+
T Consensus         1 Ms~~tLY~~~-~------~rs~~~~~~l~~~~~d~~~~~~~--~---~~~~~~~~nP----------~gkVP~L~~~   55 (75)
T d1nhya2           1 MSQGTLYANF-R------IRTWVPRGLVKALKLDVKVVTPD--A---AAEQFARDFP----------LKKVPAFVGP   55 (75)
T ss_dssp             CTTCEEECCS-S------HHHHHHHHHHHHHTCCCEEECGG--G---CHHHHHHHCT----------TCCSSEEECG
T ss_pred             CCCeEEecCC-C------chHHHHHHHHHhcCccccccCcc--c---CCHHHHHhCc----------CCCCCeEEeC
Confidence            8999998843 2      25788999999999999877654  2   2335555553          3379987544

>d1oe8a2 c.47.1.5 (A:4-84) Class alpha GST {Blood fluke (Schistosoma haematobium) [TaxId: 6185]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class alpha GST
species: Blood fluke (Schistosoma haematobium) [TaxId: 6185]

Probab=89.25  E-value=0.19  Score=28.65  Aligned_cols=31  Identities=23%  Similarity=0.243  Sum_probs=25.7

Q ss_pred             EEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEcc
Q psy3969           5 YKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDIT   41 (86)
Q Consensus         5 ~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~   41 (86)
                      .+||=-+.|.      ++.++.+|...||+|+++.++
T Consensus         4 kL~Y~~~rgr------~e~iR~lL~~~gv~ye~~~~~   34 (81)
T d1oe8a2           4 KVIYFNGRGR------AESIRMTLVAAGVNYEDERIS   34 (81)
T ss_dssp             EEEESCTTST------THHHHHHHHHTTCCCEEEECC
T ss_pred             EEEeCCCchH------HHHHHHHHHHcCCCceeEecc
Confidence            4455446666      999999999999999999887

>d1ycga1 c.23.5.1 (A:251-399) Nitric oxide reductase C-terminal domain {Moorella thermoacetica [TaxId: 1525]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Flavoproteins
family: Flavodoxin-related
domain: Nitric oxide reductase C-terminal domain
species: Moorella thermoacetica [TaxId: 1525]

Probab=89.04  E-value=0.34  Score=29.61  Aligned_cols=38  Identities=8%  Similarity=-0.014  Sum_probs=28.9

Q ss_pred             CcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccC
Q psy3969           3 KPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITE   42 (86)
Q Consensus         3 ~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~   42 (86)
                      |+.|.|.|.+||++-  =-+.+..-|.+.|++.+.+|+++
T Consensus         4 K~lIvY~S~~GnT~~--vA~~Ia~~l~~~g~~v~~~~~~~   41 (149)
T d1ycga1           4 KAVIAYDTMWLSTEK--MAHALMDGLVAGGCEVKLFKLSV   41 (149)
T ss_dssp             EEEEEECCSSSHHHH--HHHHHHHHHHHTTCEEEEEEGGG
T ss_pred             EEEEEEECCCcHHHH--HHHHHHHHHHhcCCeeEEEEccc
Confidence            567788889999543  34455566778999999999985

>d1f2ea2 c.47.1.5 (A:1-80) Class beta GST {Sphingomonas paucimobilis [TaxId: 13689]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class beta GST
species: Sphingomonas paucimobilis [TaxId: 13689]

Probab=87.68  E-value=0.2  Score=28.45  Aligned_cols=60  Identities=8%  Similarity=0.025  Sum_probs=35.6

Q ss_pred             EEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHH-HHHHHhcCCCCCCCCCCCCCCCCeEEe-CCeeee
Q psy3969           6 KISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEK-EFMQQNSKATPSDSTVKSNPLPPQIFN-EEDYCG   82 (86)
Q Consensus         6 ~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r-~~M~~~~g~~~~~~~~~~~~tvPQIFi-gd~yiG   82 (86)
                      +|++..+.+       .++.-+|..+||+|+.+.|.-....+.+ ++..+...          ..+||-+=. ||..+.
T Consensus         3 LY~~p~s~s-------~~v~~~L~e~gi~~e~~~v~~~~~~~~~~~~~~~~nP----------~g~vP~L~~d~g~~l~   64 (80)
T d1f2ea2           3 LFISPGACS-------LAPHIALRETGADFEAVKVDLAVRKTEAGEDFLTVNP----------SGKVPALTLDSGETLT   64 (80)
T ss_dssp             EEECTTSTT-------HHHHHHHHHHTCCCEEEEEETTTTEETTSCBHHHHCT----------TCCSCEEECTTSCEEE
T ss_pred             EecCCCchH-------HHHHHHHHHcCCCCEEEEEecCCCcccCCHHHHHHhh----------ccccceEEECCCeEEe
Confidence            676643322       4688899999999998877521222222 33444442          337998865 455543

>d1fo5a_ c.47.1.1 (A:) MJ0307, thioredoxin/glutaredoxin-like protein {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: MJ0307, thioredoxin/glutaredoxin-like protein
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=87.52  E-value=0.65  Score=25.61  Aligned_cols=61  Identities=10%  Similarity=0.133  Sum_probs=34.2

Q ss_pred             CCCcEE--EEEcccCchhchHHHHHHHHHH----HhC--CCceEEEEccCCCCHhHHHHHHHhcCCCCCCCCCCCCCCCC
Q psy3969           1 MKKPYK--ISNTVRGVKGVKKRQQRVLMIL----DSK--NIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPP   72 (86)
Q Consensus         1 ~~~~~~--y~ss~sgn~~vK~~q~~a~~lL----~~k--~I~f~eiDI~~~~d~~~r~~M~~~~g~~~~~~~~~~~~tvP   72 (86)
                      |+|+.|  |+|+-|+.      |.++...|    +..  .+.+..+|.+  .+++.-    ++-+  -+        .+|
T Consensus         1 m~kv~v~~F~a~wC~~------C~~~~p~~~~~~~~~~~~~~~~~~~~d--~~~~la----~~~~--V~--------~~P   58 (85)
T d1fo5a_           1 MSKVKIELFTSPMCPH------CPAAKRVVEEVANEMPDAVEVEYINVM--ENPQKA----MEYG--IM--------AVP   58 (85)
T ss_dssp             CCCEEEEEEECCCSSC------CCTHHHHHHHHHHHCSSSEEEEEEESS--SSCCTT----TSTT--TC--------CSS
T ss_pred             CCceEEEEEECCCCcC------hHhhhhhcccccccccccccccccccc--cccccc----ccCC--ce--------Eee
Confidence            667665  78999998      44433333    233  3566677776  454432    2233  22        567


Q ss_pred             eEEeC--Ceeeec
Q psy3969          73 QIFNE--EDYCGV   83 (86)
Q Consensus        73 QIFig--d~yiGg   83 (86)
                      .|+++  ++++|.
T Consensus        59 t~~i~~~g~~~G~   71 (85)
T d1fo5a_          59 TIVINGDVEFIGA   71 (85)
T ss_dssp             EEEETTEEECCSS
T ss_pred             EEEEECCcEEECC
Confidence            77665  455554

>d1e5da1 c.23.5.1 (A:251-402) Rubredoxin oxygen:oxidoreductase (ROO), C-terminal domain {Desulfovibrio gigas [TaxId: 879]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Flavoproteins
family: Flavodoxin-related
domain: Rubredoxin oxygen:oxidoreductase (ROO), C-terminal domain
species: Desulfovibrio gigas [TaxId: 879]

Probab=85.47  E-value=0.8  Score=27.86  Aligned_cols=39  Identities=3%  Similarity=-0.072  Sum_probs=30.4

Q ss_pred             CCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccC
Q psy3969           2 KKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITE   42 (86)
Q Consensus         2 ~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~   42 (86)
                      +|+.|.|.|.+||++-  =-..+..-|.+.|++.+.+|+..
T Consensus         3 ~Ki~IiY~S~tGnTe~--~A~~Ia~~l~~~g~ev~~~~~~~   41 (152)
T d1e5da1           3 NKVVIFYDSMWHSTEK--MARVLAESFRDEGCTVKLMWCKA   41 (152)
T ss_dssp             SEEEEEECCSSSHHHH--HHHHHHHHHHHTTCEEEEEETTT
T ss_pred             CeEEEEEECCCcHHHH--HHHHHHHHHhhCCCEEEEeeccc
Confidence            5788999999999543  34455666888999999999973

>d1vmea1 c.23.5.1 (A:251-398) ROO-like flavoprotein TM0755, C-terminal domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Flavoproteins
family: Flavodoxin-related
domain: ROO-like flavoprotein TM0755, C-terminal domain
species: Thermotoga maritima [TaxId: 2336]

Probab=81.46  E-value=1.8  Score=26.04  Aligned_cols=39  Identities=15%  Similarity=0.183  Sum_probs=29.8

Q ss_pred             CCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccC
Q psy3969           2 KKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITE   42 (86)
Q Consensus         2 ~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~   42 (86)
                      .|+.|+|.|.+||++  +=-..+..-|.+.|++-+.+++..
T Consensus         4 ~kv~IiY~S~tGnTe--~~A~~i~~~l~~~g~~v~~~~~~~   42 (148)
T d1vmea1           4 GKVTVIYDSMYGFVE--NVMKKAIDSLKEKGFTPVVYKFSD   42 (148)
T ss_dssp             TEEEEEEECSSSHHH--HHHHHHHHHHHHTTCEEEEEEECS
T ss_pred             CEEEEEEECCCcHHH--HHHHHHHHHHHhCCCeEEEEeccc
Confidence            467889999999954  334455677889999999998863

>d1f4pa_ c.23.5.1 (A:) Flavodoxin {Desulfovibrio vulgaris [TaxId: 881]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Flavoproteins
family: Flavodoxin-related
domain: Flavodoxin
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=80.67  E-value=0.87  Score=28.08  Aligned_cols=38  Identities=11%  Similarity=0.098  Sum_probs=30.2

Q ss_pred             CcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccC
Q psy3969           3 KPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITE   42 (86)
Q Consensus         3 ~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~   42 (86)
                      |+.|+|.|.+||.+  +-...+..-|.+.|++.+.+|+.+
T Consensus         2 kv~I~Y~S~tG~te--~~A~~i~~~l~~~g~~v~~~~~~~   39 (147)
T d1f4pa_           2 KALIVYGSTTGNTE--YTAETIARELADAGYEVDSRDAAS   39 (147)
T ss_dssp             EEEEEEECSSSHHH--HHHHHHHHHHHHHTCEEEEEEGGG
T ss_pred             cEEEEEECCChhHH--HHHHHHHHHHHHCCCeEEEEeccc
Confidence            67899999999954  344556677888999999999963

>d1ja1a2 c.23.5.2 (A:63-239) NADPH-cytochrome p450 reductase, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Flavoproteins
family: Cytochrome p450 reductase N-terminal domain-like
domain: NADPH-cytochrome p450 reductase, N-terminal domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=80.49  E-value=1  Score=29.24  Aligned_cols=45  Identities=9%  Similarity=-0.068  Sum_probs=31.9

Q ss_pred             CCcEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccCCCCHhHH
Q psy3969           2 KKPYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEK   49 (86)
Q Consensus         2 ~~~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~~~d~~~r   49 (86)
                      +++.|+|+|.+||.+-=  ..++...|...|++...+|+.+ -+.+..
T Consensus        16 k~i~IlygS~tGnae~~--A~~l~~~l~~~g~~~~~~~~~~-~~~~~l   60 (177)
T d1ja1a2          16 RNIIVFYGSQTGTAEEF--ANRLSKDAHRYGMRGMSADPEE-YDLADL   60 (177)
T ss_dssp             CCEEEEEECSSSHHHHH--HHHHHHHGGGGTCCEEEECGGG-SCGGGG
T ss_pred             CeEEEEEECCchHHHHH--HHHHHHHHHHCCCceEEeeccc-cchhhh
Confidence            47889999999995433  2334566788999999999863 344433

>d2fz5a1 c.23.5.1 (A:1-137) Flavodoxin {Megasphaera elsdenii [TaxId: 907]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Flavoproteins
family: Flavodoxin-related
domain: Flavodoxin
species: Megasphaera elsdenii [TaxId: 907]

Probab=80.33  E-value=2.1  Score=25.47  Aligned_cols=37  Identities=5%  Similarity=0.023  Sum_probs=28.0

Q ss_pred             cEEEEEcccCchhchHHHHHHHHHHHhCCCceEEEEccC
Q psy3969           4 PYKISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITE   42 (86)
Q Consensus         4 ~~~y~ss~sgn~~vK~~q~~a~~lL~~k~I~f~eiDI~~   42 (86)
                      +.|+|.|.+||.+-  =-+.+..-|.+.|++.+.+|+.+
T Consensus         2 V~IvY~S~tGnTe~--~A~~ia~~l~~~g~~v~~~~~~~   38 (137)
T d2fz5a1           2 VEIVYWSGTGNTEA--MANEIEAAVKAAGADVESVRFED   38 (137)
T ss_dssp             EEEEECCSSSHHHH--HHHHHHHHHHHTTCCEEEEETTS
T ss_pred             EEEEEECCChHHHH--HHHHHHHHHHhcCCceEEeehhh
Confidence            46788899999543  33445567888999999999974