Psyllid ID: psy4019

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------11
Protein Sequence
MKLNLAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKSEVSVDLDPLSPSSRSLQLED
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccEEEEccccccccccHHHHHHHHHHccccHHHEcHccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEccc
Coil and Loop (DISEMBL)
mklnlaypllssqkpyvcgeenctkrytdpsslrkhiktvhgehcyankkhkgmpskdkdglggaspsrsddmplsaktasvsspsiksevsvdldplspssrslqled
Flexible Loop (DISEMBL)
mklnlaypllssqkpyvcgeenctkrytdpsslrkHIKTVHGEhcyankkhkgmpskDKDGLGGASPSRSDDMPLSAKtasvsspsiksevsvdldplspssrslqled
Low Complexity Region (SEG)
MKLNLAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTAsvsspsiksevsvdldplspssRSLQLED
Disordered region (IsUnstruct)
********LL***KPYVCGEENCTKRY********HIKTVHGEHCY***************************************************************
Disordered Region (DISOPRED)
******YPLLSSQKPYVCGEENCTKRYTDPSSLRKHI************************************************************************
Disordered Region (DISEMBL)
MKLNLAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKK***********************************************************
Disordered Region (DISPRO)
*KLNLAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYAN*K************************************************SPSSR*L****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKLNLAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKSEVSVDLDPLSPSSRSLQLED
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	109	2.2.26 [Sep-21-2011]
P19538	1397	Transcriptional activator	yes	N/A	0.761	0.059	0.505	2e-16
O77027	403	Protein cubitus interrupt	N/A	N/A	0.761	0.205	0.484	1e-15
Q91690	1360	Zinc finger protein GLI1	N/A	N/A	0.467	0.037	0.578	4e-11
P08151	1106	Zinc finger protein GLI1	yes	N/A	0.394	0.038	0.651	7e-11
P47806	1111	Zinc finger protein GLI1	yes	N/A	0.770	0.075	0.39	7e-11
Q61602	1583	Transcriptional activator	no	N/A	0.394	0.027	0.651	1e-10
Q5IS56	1580	Transcriptional activator	no	N/A	0.385	0.026	0.651	1e-10
P10071	1580	Transcriptional activator	no	N/A	0.385	0.026	0.651	1e-10
Q91660	1569	Zinc finger protein GLI3	N/A	N/A	0.394	0.027	0.651	1e-10
Q91661	1361	Zinc finger protein GLI4	N/A	N/A	0.385	0.030	0.642	1e-10

>sp|P19538|CI_DROME Transcriptional activator cubitus interruptus OS=Drosophila melanogaster GN=ci PE=1 SV=2

 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 48/95 (50%), Positives = 56/95 (58%), Gaps = 12/95 (12%)

Query: 11  SSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRS 70
           S++KPY+C    CTKRYTDPSSLRKH+KTVHG   YANKKHKG+P  D +     + SR 
Sbjct: 573 SNEKPYICKAPGCTKRYTDPSSLRKHVKTVHGAEFYANKKHKGLPLNDANSRLQQNNSRH 632

Query: 71  -------DDMPLS-----AKTASVSSPSIKSEVSV 93
                  D  P S      K    SSPSIKSE  +
Sbjct: 633 NLQEHNIDSSPCSEDSHLGKMLGTSSPSIKSESDI 667

Has a dual function as a transcriptional activator and a repressor of the hedgehog (Hh) pathway. The full-length ci form (ciFL), acts as an activator (ciA) while ciR, its C-terminally truncated form, acts as a repressor. Involved in segment polarity. Required for the normal development of the posterior half of each embryonic segment. Engrailed protein directly represses ci expression in posterior compartment cells.
Drosophila melanogaster (taxid: 7227)

>sp|O77027|CI_DROYA Protein cubitus interruptus (Fragment) OS=Drosophila yakuba GN=ci PE=3 SV=1

 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 47/97 (48%), Positives = 54/97 (55%), Gaps = 14/97 (14%)

Query: 11  SSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSKDKD---------G 61
           S++KPY+C    CTKRYTDPSSLRKH+KTVHG   YANKKHKG+P  D +         G
Sbjct: 53  SNEKPYICKAPGCTKRYTDPSSLRKHVKTVHGAEFYANKKHKGLPLDDVNSRLQRDNSQG 112

Query: 62  LGGASPSRSDDMPLS-----AKTASVSSPSIKSEVSV 93
                    D  P S      K    SSPSIKSE  +
Sbjct: 113 RHNLQEHNIDSSPCSEDSHIGKILGTSSPSIKSESDI 149

Involved in segment polarity. Required for the normal development of the posterior half of each embryonic segment. Engrailed protein directly represses ci expression in posterior compartment cells.

Drosophila yakuba (taxid: 7245)

>sp|Q91690|GLI1_XENLA Zinc finger protein GLI1 (Fragment) OS=Xenopus laevis GN=gli1 PE=2 SV=2

 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 33/57 (57%), Positives = 39/57 (68%), Gaps = 6/57 (10%)

Query: 11  SSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSKDKDGLGGASP 67
           S++KPYVC    CTKRYTDPSSLRKH+KTVHG   +  KKH+G      DG+  A P
Sbjct: 372 SNEKPYVCKIPGCTKRYTDPSSLRKHVKTVHGPEAHITKKHRG------DGMLRAQP 422

May act as a transcriptional activator. Implicated in the transduction of Shh signal.

Xenopus laevis (taxid: 8355)

>sp|P08151|GLI1_HUMAN Zinc finger protein GLI1 OS=Homo sapiens GN=GLI1 PE=1 SV=1

 Score = 65.9 bits (159), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 28/43 (65%), Positives = 34/43 (79%)

Query: 11  SSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKG 53
           S++KPYVC    CTKRYTDPSSLRKH+KTVHG   +  K+H+G
Sbjct: 357 SNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHGPDAHVTKRHRG 399

Acts as a transcriptional activator. May regulate the transcription of specific genes during normal development. May play a role in craniofacial development and digital development, as well as development of the central nervous system and gastrointestinal tract. Mediates SHH signaling and thus cell proliferation and differentiation.

Homo sapiens (taxid: 9606)

>sp|P47806|GLI1_MOUSE Zinc finger protein GLI1 OS=Mus musculus GN=Gli1 PE=1 SV=4

 Score = 65.9 bits (159), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 39/100 (39%), Positives = 52/100 (52%), Gaps = 16/100 (16%)

Query: 11  SSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKG-------------MPSK 57
           S++KPYVC    CTKRYTDPSSLRKH+KTVHG   +  K+H+G              P +
Sbjct: 360 SNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHGPDAHVTKRHRGDGPLPRAQPLSTVEPKR 419

Query: 58  DKDGLGGASPSRSDDMPLSAKTASVSSPSIKSEVSVDLDP 97
           +++G  G   SR   + +        SP  +S  S D  P
Sbjct: 420 EREGGSGREESR---LTVPESAMPQQSPGAQSSCSSDHSP 456

Acts as a transcriptional activator. May regulate the transcription of specific genes during normal development. May play a role in craniofacial development and digital development, as well as development of the central nervous system and gastrointestinal tract. Mediates SHH signaling and thus cell proliferation and differentiation.

Mus musculus (taxid: 10090)

>sp|Q61602|GLI3_MOUSE Transcriptional activator GLI3 OS=Mus musculus GN=Gli3 PE=1 SV=2

 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 28/43 (65%), Positives = 33/43 (76%)

Query: 11  SSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKG 53
           S++KPYVC    CTKRYTDPSSLRKH+KTVHG   +  KK +G
Sbjct: 602 SNEKPYVCKIPGCTKRYTDPSSLRKHVKTVHGPEAHVTKKQRG 644

Has a dual function as a transcriptional activator and a repressor of the sonic hedgehog (Shh) pathway, and plays a role in limb development. The full-length GLI3 form (GLI3FL) after phosphorylation and nuclear translocation, acts as an activator (GLI3A) while GLI3R, its C-terminally truncated form, acts as a repressor. A proper balance between the GLI3 activator and the repressor GLI3R, rather than the repressor gradient itself or the activator/repressor ratio gradient, specifies limb digit number and identity. In concert with TRPS1, plays a role in regulating the size of the zone of distal chondrocytes, in restricting the zone of PTHLH expression in distal cells and in activating chondrocyte proliferation. Binds to the minimal GLI-consensus sequence 5'-GGGTGGTC-3'.

Mus musculus (taxid: 10090)

>sp|Q5IS56|GLI3_PANTR Transcriptional activator GLI3 OS=Pan troglodytes GN=GLI3 PE=2 SV=1

 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 28/43 (65%), Positives = 33/43 (76%)

Query: 11  SSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKG 53
           S++KPYVC    CTKRYTDPSSLRKH+KTVHG   +  KK +G
Sbjct: 602 SNEKPYVCKIPGCTKRYTDPSSLRKHVKTVHGPEAHVTKKQRG 644

Has a dual function as a transcriptional activator and a repressor of the sonic hedgehog (Shh) pathway, and plays a role in limb development. The full-length GLI3 form (GLI3FL) after phosphorylation and nuclear translocation, acts as an activator (GLI3A) while GLI3R, its C-terminally truncated form, acts as a repressor. A proper balance between the GLI3 activator and the repressor GLI3R, rather than the repressor gradient itself or the activator/repressor ratio gradient, specifies limb digit number and identity. In concert with TRPS1, plays a role in regulating the size of the zone of distal chondrocytes, in restricting the zone of PTHLH expression in distal cells and in activating chondrocyte proliferation. Binds to the minimal GLI-consensus sequence 5'-GGGTGGTC-3'. Plays a role in limb and brain development.

Pan troglodytes (taxid: 9598)

>sp|P10071|GLI3_HUMAN Transcriptional activator GLI3 OS=Homo sapiens GN=GLI3 PE=1 SV=6

 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 28/43 (65%), Positives = 33/43 (76%)

Query: 11  SSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKG 53
           S++KPYVC    CTKRYTDPSSLRKH+KTVHG   +  KK +G
Sbjct: 602 SNEKPYVCKIPGCTKRYTDPSSLRKHVKTVHGPEAHVTKKQRG 644

Has a dual function as a transcriptional activator and a repressor of the sonic hedgehog (Shh) pathway, and plays a role in limb development. The full-length GLI3 form (GLI3FL) after phosphorylation and nuclear translocation, acts as an activator (GLI3A) while GLI3R, its C-terminally truncated form, acts as a repressor. A proper balance between the GLI3 activator and the repressor GLI3R, rather than the repressor gradient itself or the activator/repressor ratio gradient, specifies limb digit number and identity. In concert with TRPS1, plays a role in regulating the size of the zone of distal chondrocytes, in restricting the zone of PTHLH expression in distal cells and in activating chondrocyte proliferation. Binds to the minimal GLI-consensus sequence 5'-GGGTGGTC-3'.

Homo sapiens (taxid: 9606)

>sp|Q91660|GLI3_XENLA Zinc finger protein GLI3 OS=Xenopus laevis GN=gli3 PE=2 SV=1

 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 28/43 (65%), Positives = 33/43 (76%)

Query: 11  SSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKG 53
           S++KPYVC    CTKRYTDPSSLRKH+KTVHG   +  KK +G
Sbjct: 607 SNEKPYVCKIPGCTKRYTDPSSLRKHVKTVHGPEAHVTKKQRG 649

Has a dual function as a transcriptional activator and a repressor of the sonic hedgehog (Shh) pathway, and may play a role in limb development. May bind to the minimal GLI-consensus sequence 5'-GGGTGGTC-3' (By similarity). Has an essential role in the early embryonic patterning of mesoderm and neuroectoderm.

Xenopus laevis (taxid: 8355)

>sp|Q91661|GLI4_XENLA Zinc finger protein GLI4 OS=Xenopus laevis GN=gli4 PE=2 SV=1

 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 27/42 (64%), Positives = 33/42 (78%)

Query: 11  SSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHK 52
           S++KPY+C    CTKRYTDPSSLRKH+KTVHG   +  KKH+
Sbjct: 411 SNEKPYICKVPGCTKRYTDPSSLRKHVKTVHGPEAHVTKKHR 452

Has an essential role in the early embryonic patterning of mesoderm and neuroectoderm.

Xenopus laevis (taxid: 8355)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	109
189235243	1259	PREDICTED: similar to zinc finger protei	0.761	0.065	0.647	1e-19
270004843	1247	cubitus interruptus [Tribolium castaneum	0.761	0.066	0.647	1e-19
332020505	1369	Protein cubitus interruptus [Acromyrmex	0.779	0.062	0.597	1e-19
328710671	1070	PREDICTED: transcriptional activator GLI	0.733	0.074	0.585	2e-19
383855083	1445	PREDICTED: transcriptional activator cub	0.788	0.059	0.597	4e-19
345487437	1389	PREDICTED: transcriptional activator cub	0.779	0.061	0.602	5e-19
322789446	943	hypothetical protein SINV_12992 [Solenop	0.779	0.090	0.586	9e-19
350420960	1428	PREDICTED: transcriptional activator cub	0.779	0.059	0.604	9e-19
340713212	1450	PREDICTED: transcriptional activator cub	0.779	0.058	0.604	9e-19
380020862	1385	PREDICTED: transcriptional activator cub	0.779	0.061	0.604	9e-19

>gi|189235243|ref|XP_970110.2| PREDICTED: similar to zinc finger protein [Tribolium castaneum]

 Score =  100 bits (249), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 55/85 (64%), Positives = 63/85 (74%), Gaps = 2/85 (2%)

Query: 11  SSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPS-R 69
           S++KPYVC    CTKRYTDPSSLRKH+KTVHG   YANKKHKG+    +DG  G   S R
Sbjct: 451 SNEKPYVCKAPGCTKRYTDPSSLRKHVKTVHGADFYANKKHKGIDGGSEDGAAGLDSSPR 510

Query: 70  SDDMPLSAKTASVSSPSIKSEVSVD 94
           S+DM  S KTAS+SSPSIKSE  V+
Sbjct: 511 SEDM-QSHKTASLSSPSIKSESDVN 534

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270004843|gb|EFA01291.1| cubitus interruptus [Tribolium castaneum]

 Score =  100 bits (249), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 55/85 (64%), Positives = 63/85 (74%), Gaps = 2/85 (2%)

Query: 11  SSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPS-R 69
           S++KPYVC    CTKRYTDPSSLRKH+KTVHG   YANKKHKG+    +DG  G   S R
Sbjct: 439 SNEKPYVCKAPGCTKRYTDPSSLRKHVKTVHGADFYANKKHKGIDGGSEDGAAGLDSSPR 498

Query: 70  SDDMPLSAKTASVSSPSIKSEVSVD 94
           S+DM  S KTAS+SSPSIKSE  V+
Sbjct: 499 SEDM-QSHKTASLSSPSIKSESDVN 522

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332020505|gb|EGI60920.1| Protein cubitus interruptus [Acromyrmex echinatior]

 Score =  100 bits (248), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 55/92 (59%), Positives = 64/92 (69%), Gaps = 7/92 (7%)

Query: 11  SSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSK-----DKDGLGGA 65
           SS+KPY+C    CTKRYTDPSSLRKH+KTVHG   YANKKHKG         D+ G GG 
Sbjct: 474 SSEKPYICKAPGCTKRYTDPSSLRKHVKTVHGAEFYANKKHKGGGGGDGGGSDETGAGGN 533

Query: 66  SPSRSDDMPLSAKTASVSSPSIKSEVSVDLDP 97
           SPSRS+D+P   KT S+SSPS+KSE   +  P
Sbjct: 534 SPSRSEDLP--PKTPSLSSPSVKSESEANSPP 563

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328710671|ref|XP_003244329.1| PREDICTED: transcriptional activator GLI3-like isoform 1 [Acyrthosiphon pisum] gi|328710673|ref|XP_003244330.1| PREDICTED: transcriptional activator GLI3-like isoform 2 [Acyrthosiphon pisum]

 Score = 99.8 bits (247), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 55/94 (58%), Positives = 63/94 (67%), Gaps = 14/94 (14%)

Query: 11  SSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSKDKD---------- 60
           SS+KPY+C    CTKRYTDPSSLRKH+KTVHG   YA+K+HKG  + D            
Sbjct: 316 SSEKPYICKAPGCTKRYTDPSSLRKHVKTVHGADFYAHKRHKGNGNGDNSRGGGSGGGGG 375

Query: 61  ----GLGGASPSRSDDMPLSAKTASVSSPSIKSE 90
               G   ASP RSD+MP+SAKT SVSSPSIKSE
Sbjct: 376 GNGPGADDASPYRSDEMPMSAKTVSVSSPSIKSE 409

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383855083|ref|XP_003703048.1| PREDICTED: transcriptional activator cubitus interruptus-like [Megachile rotundata]

 Score = 98.6 bits (244), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 55/92 (59%), Positives = 64/92 (69%), Gaps = 6/92 (6%)

Query: 11  SSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSK----DKDGLGGAS 66
           S++KPYVC    CTKRYTDPSSLRKH+KTVHG   YANKKHKG        D+ G GG S
Sbjct: 555 SNEKPYVCKAPGCTKRYTDPSSLRKHVKTVHGAEFYANKKHKGGGGDGGGSDEAGAGGHS 614

Query: 67  PSRSDDMPLSAKTASVSSPSIKSEVSVDLDPL 98
           PSRS+D  L  KT S+SSPS+KSE   +  P+
Sbjct: 615 PSRSED--LHPKTPSLSSPSVKSESEANSPPM 644

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345487437|ref|XP_001602427.2| PREDICTED: transcriptional activator cubitus interruptus-like [Nasonia vitripennis]

 Score = 98.2 bits (243), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 56/93 (60%), Positives = 65/93 (69%), Gaps = 8/93 (8%)

Query: 11  SSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKG-----MPSKDKDGLGG- 64
           S++KPYVC    CTKRYTDPSSLRKH+KTVHG   YANKKHKG      P  D+ G GG 
Sbjct: 484 SNEKPYVCKAPGCTKRYTDPSSLRKHVKTVHGPEFYANKKHKGGGNGDNPGSDEAGHGGH 543

Query: 65  ASPSRSDDMPLSAKTASVSSPSIKSEVSVDLDP 97
           +SPSRS+D  L  KT S+SSPS+KSE   +  P
Sbjct: 544 SSPSRSED--LHPKTPSLSSPSVKSESEANSPP 574

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322789446|gb|EFZ14743.1| hypothetical protein SINV_12992 [Solenopsis invicta]

 Score = 97.4 bits (241), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 54/92 (58%), Positives = 63/92 (68%), Gaps = 7/92 (7%)

Query: 11  SSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHK-----GMPSKDKDGLGGA 65
           SS+KPY+C    CTKRYTDPSSLRKH+KTVHG   YANKKHK          D+ G GG 
Sbjct: 53  SSEKPYICKAPGCTKRYTDPSSLRKHVKTVHGAEFYANKKHKGGGSGDGGGSDEAGAGGN 112

Query: 66  SPSRSDDMPLSAKTASVSSPSIKSEVSVDLDP 97
           SPSRS+D+P   KT S+SSPS+KSE   +  P
Sbjct: 113 SPSRSEDLP--PKTPSLSSPSVKSESEANSPP 142

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350420960|ref|XP_003492685.1| PREDICTED: transcriptional activator cubitus interruptus-like [Bombus impatiens]

 Score = 97.4 bits (241), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 55/91 (60%), Positives = 63/91 (69%), Gaps = 6/91 (6%)

Query: 11  SSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSK----DKDGLGGAS 66
           S++KPYVC    CTKRYTDPSSLRKH+KTVHG   YANKKHKG        D+ G GG S
Sbjct: 532 SNEKPYVCKAPGCTKRYTDPSSLRKHVKTVHGAEFYANKKHKGGGGDGGGSDEAGAGGHS 591

Query: 67  PSRSDDMPLSAKTASVSSPSIKSEVSVDLDP 97
           PSRS+D  L  KT S+SSPS+KSE   +  P
Sbjct: 592 PSRSED--LHPKTPSLSSPSVKSESEANSPP 620

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340713212|ref|XP_003395140.1| PREDICTED: transcriptional activator cubitus interruptus-like [Bombus terrestris]

 Score = 97.4 bits (241), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 55/91 (60%), Positives = 63/91 (69%), Gaps = 6/91 (6%)

Query: 11  SSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSK----DKDGLGGAS 66
           S++KPYVC    CTKRYTDPSSLRKH+KTVHG   YANKKHKG        D+ G GG S
Sbjct: 554 SNEKPYVCKAPGCTKRYTDPSSLRKHVKTVHGAEFYANKKHKGGGGDGGGSDEAGAGGHS 613

Query: 67  PSRSDDMPLSAKTASVSSPSIKSEVSVDLDP 97
           PSRS+D  L  KT S+SSPS+KSE   +  P
Sbjct: 614 PSRSED--LHPKTPSLSSPSVKSESEANSPP 642

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380020862|ref|XP_003694296.1| PREDICTED: transcriptional activator cubitus interruptus-like [Apis florea]

 Score = 97.4 bits (241), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 55/91 (60%), Positives = 63/91 (69%), Gaps = 6/91 (6%)

Query: 11  SSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSK----DKDGLGGAS 66
           S++KPYVC    CTKRYTDPSSLRKH+KTVHG   YANKKHKG        D+ G GG S
Sbjct: 492 SNEKPYVCKAPGCTKRYTDPSSLRKHVKTVHGAEFYANKKHKGGGGDGGGSDEAGAGGHS 551

Query: 67  PSRSDDMPLSAKTASVSSPSIKSEVSVDLDP 97
           PSRS+D  L  KT S+SSPS+KSE   +  P
Sbjct: 552 PSRSED--LHPKTPSLSSPSVKSESEANSPP 580

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	109
UNIPROTKB|O77027	403	ci "Protein cubitus interruptu	0.440	0.119	0.708	2.4e-15
FB|FBgn0004859	1397	ci "cubitus interruptus" [Dros	0.440	0.034	0.708	1.6e-14
UNIPROTKB|H9L0M4	542	GLI1 "Zinc finger protein GLI1	0.394	0.079	0.651	1.4e-13
UNIPROTKB|P55878	556	GLI1 "Zinc finger protein GLI1	0.394	0.077	0.651	1.5e-13
RGD|621673	104	Gli1 "GLI family zinc finger 1	0.541	0.567	0.533	1.5e-12
UNIPROTKB|Q91690	1360	gli1 "Zinc finger protein GLI1	0.394	0.031	0.674	5.6e-12
UNIPROTKB|F1SKG0	750	GLI1 "Uncharacterized protein"	0.568	0.082	0.523	6.8e-12
UNIPROTKB|A6H727	1105	GLI1 "GLI1 protein" [Bos tauru	0.568	0.056	0.523	7e-12
UNIPROTKB|E2QZT1	1105	GLI1 "Uncharacterized protein"	0.568	0.056	0.523	1.1e-11
UNIPROTKB|F1M9H1	1539	Gli3 "Protein Gli3" [Rattus no	0.577	0.040	0.529	1.3e-11

UNIPROTKB|O77027 ci "Protein cubitus interruptus" [Drosophila yakuba (taxid:7245)]

 Score = 199 (75.1 bits), Expect = 2.4e-15, P = 2.4e-15
 Identities = 34/48 (70%), Positives = 39/48 (81%)

Query:    11 SSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSKD 58
             S++KPY+C    CTKRYTDPSSLRKH+KTVHG   YANKKHKG+P  D
Sbjct:    53 SNEKPYICKAPGCTKRYTDPSSLRKHVKTVHGAEFYANKKHKGLPLDD 100

GO:0005634 "nucleus" evidence=ISS

GO:0007367 "segment polarity determination" evidence=ISS

FB|FBgn0004859 ci "cubitus interruptus" [Drosophila melanogaster (taxid:7227)]

 Score = 200 (75.5 bits), Expect = 1.6e-14, P = 1.6e-14
 Identities = 34/48 (70%), Positives = 39/48 (81%)

Query:    11 SSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSKD 58
             S++KPY+C    CTKRYTDPSSLRKH+KTVHG   YANKKHKG+P  D
Sbjct:   573 SNEKPYICKAPGCTKRYTDPSSLRKHVKTVHGAEFYANKKHKGLPLND 620

GO:0007367 "segment polarity determination" evidence=IMP

GO:0035224 "genital disc anterior/posterior pattern formation" evidence=IEP

GO:0060914 "heart formation" evidence=IMP

GO:0007224 "smoothened signaling pathway" evidence=IEP;NAS;IMP;TAS

GO:0005737 "cytoplasm" evidence=IDA

GO:0048477 "oogenesis" evidence=IEP

GO:0000977 "RNA polymerase II regulatory region sequence-specific DNA binding" evidence=IDA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IGI;IMP;IDA;TAS

GO:0043234 "protein complex" evidence=IPI

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=TAS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=NAS;TAS

GO:0005634 "nucleus" evidence=IDA;NAS

GO:0005515 "protein binding" evidence=IPI

GO:0001077 "RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription" evidence=IGI

GO:0030707 "ovarian follicle cell development" evidence=TAS

GO:0035301 "Hedgehog signaling complex" evidence=IPI

GO:0007346 "regulation of mitotic cell cycle" evidence=IMP

GO:0007350 "blastoderm segmentation" evidence=TAS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016020 "membrane" evidence=IDA

GO:0035217 "labial disc development" evidence=IMP

GO:0048100 "wing disc anterior/posterior pattern formation" evidence=IMP

GO:0045750 "positive regulation of S phase of mitotic cell cycle" evidence=IMP

GO:0035277 "spiracle morphogenesis, open tracheal system" evidence=IMP

GO:0035017 "cuticle pattern formation" evidence=IMP

GO:0048666 "neuron development" evidence=IMP

GO:0048813 "dendrite morphogenesis" evidence=IMP

GO:0008544 "epidermis development" evidence=IMP

GO:0048592 "eye morphogenesis" evidence=IMP

GO:0030858 "positive regulation of epithelial cell differentiation" evidence=IMP

GO:0044212 "transcription regulatory region DNA binding" evidence=IDA

UNIPROTKB|H9L0M4 GLI1 "Zinc finger protein GLI1" [Gallus gallus (taxid:9031)]

 Score = 168 (64.2 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
 Identities = 28/43 (65%), Positives = 34/43 (79%)

Query:    11 SSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKG 53
             S++KPY+C    CTKRYTDPSSLRKH+KTVHG   +  KKH+G
Sbjct:   369 SNEKPYICKIPGCTKRYTDPSSLRKHVKTVHGPDAHVTKKHRG 411

GO:0008270 "zinc ion binding" evidence=IEA

GO:0001649 "osteoblast differentiation" evidence=IEA

GO:0003682 "chromatin binding" evidence=IEA

GO:0003705 "RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0005929 "cilium" evidence=IEA

GO:0007283 "spermatogenesis" evidence=IEA

GO:0007418 "ventral midline development" evidence=IEA

GO:0008017 "microtubule binding" evidence=IEA

GO:0009913 "epidermal cell differentiation" evidence=IEA

GO:0009953 "dorsal/ventral pattern formation" evidence=IEA

GO:0009954 "proximal/distal pattern formation" evidence=IEA

GO:0021696 "cerebellar cortex morphogenesis" evidence=IEA

GO:0021938 "smoothened signaling pathway involved in regulation of cerebellar granule cell precursor cell proliferation" evidence=IEA

GO:0021983 "pituitary gland development" evidence=IEA

GO:0030324 "lung development" evidence=IEA

GO:0044212 "transcription regulatory region DNA binding" evidence=IEA

GO:0045740 "positive regulation of DNA replication" evidence=IEA

GO:0045880 "positive regulation of smoothened signaling pathway" evidence=IEA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0060032 "notochord regression" evidence=IEA

GO:0090090 "negative regulation of canonical Wnt receptor signaling pathway" evidence=IEA

UNIPROTKB|P55878 GLI1 "Zinc finger protein GLI1" [Gallus gallus (taxid:9031)]

 Score = 168 (64.2 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
 Identities = 28/43 (65%), Positives = 34/43 (79%)

Query:    11 SSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKG 53
             S++KPY+C    CTKRYTDPSSLRKH+KTVHG   +  KKH+G
Sbjct:   369 SNEKPYICKIPGCTKRYTDPSSLRKHVKTVHGPDAHVTKKHRG 411

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=IEA

GO:0030154 "cell differentiation" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=ISS

GO:0005634 "nucleus" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISS

RGD|621673 Gli1 "GLI family zinc finger 1" [Rattus norvegicus (taxid:10116)]

 Score = 167 (63.8 bits), Expect = 1.5e-12, P = 1.5e-12
 Identities = 32/60 (53%), Positives = 38/60 (63%)

Query:    11 SSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGM-PSKDKDGLGGASPSR 69
             S++KPYVC    CTKRYTDPSSLRKH+KTVHG   +  K+H+G  P      L    P R
Sbjct:     1 SNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHGPDAHVTKRHRGDGPLPRAQPLSTVEPKR 60

GO:0001649 "osteoblast differentiation" evidence=ISO

GO:0003674 "molecular_function" evidence=ND

GO:0003677 "DNA binding" evidence=ISO

GO:0003682 "chromatin binding" evidence=ISO

GO:0003705 "RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity" evidence=ISO

GO:0005575 "cellular_component" evidence=ND

GO:0005634 "nucleus" evidence=ISO

GO:0005737 "cytoplasm" evidence=ISO

GO:0005829 "cytosol" evidence=ISO

GO:0005929 "cilium" evidence=ISO

GO:0007224 "smoothened signaling pathway" evidence=ISO

GO:0007283 "spermatogenesis" evidence=ISO

GO:0007418 "ventral midline development" evidence=ISO

GO:0008017 "microtubule binding" evidence=ISO

GO:0008150 "biological_process" evidence=ND

GO:0008284 "positive regulation of cell proliferation" evidence=ISO

GO:0009913 "epidermal cell differentiation" evidence=ISO

GO:0009953 "dorsal/ventral pattern formation" evidence=ISO

GO:0009954 "proximal/distal pattern formation" evidence=ISO

GO:0021696 "cerebellar cortex morphogenesis" evidence=ISO

GO:0021938 "smoothened signaling pathway involved in regulation of cerebellar granule cell precursor cell proliferation" evidence=ISO

GO:0021983 "pituitary gland development" evidence=ISO

GO:0030324 "lung development" evidence=ISO

GO:0044212 "transcription regulatory region DNA binding" evidence=ISO

GO:0045740 "positive regulation of DNA replication" evidence=ISO

GO:0045880 "positive regulation of smoothened signaling pathway" evidence=ISO

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=ISO

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=ISO

GO:0060032 "notochord regression" evidence=ISO

GO:0072372 "primary cilium" evidence=ISO

GO:0090090 "negative regulation of canonical Wnt receptor signaling pathway" evidence=ISO

UNIPROTKB|Q91690 gli1 "Zinc finger protein GLI1" [Xenopus laevis (taxid:8355)]

 Score = 169 (64.5 bits), Expect = 5.6e-12, Sum P(2) = 5.6e-12
 Identities = 29/43 (67%), Positives = 34/43 (79%)

Query:    11 SSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKG 53
             S++KPYVC    CTKRYTDPSSLRKH+KTVHG   +  KKH+G
Sbjct:   372 SNEKPYVCKIPGCTKRYTDPSSLRKHVKTVHGPEAHITKKHRG 414

GO:0005634 "nucleus" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISS

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=ISS

UNIPROTKB|F1SKG0 GLI1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 172 (65.6 bits), Expect = 6.8e-12, P = 6.8e-12
 Identities = 33/63 (52%), Positives = 38/63 (60%)

Query:    11 SSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGM-PSKDKDGLGGASPSR 69
             + QKPYVC    CTKRYTDPSSLRKH+KTVHG   +  K+H+G  P      L    P R
Sbjct:     1 TQQKPYVCKLPGCTKRYTDPSSLRKHVKTVHGPDAHVTKRHRGDGPLPRASALSTVEPKR 60

Query:    70 SDD 72
               D
Sbjct:    61 ERD 63

GO:0090090 "negative regulation of canonical Wnt receptor signaling pathway" evidence=IEA

GO:0060032 "notochord regression" evidence=IEA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0045880 "positive regulation of smoothened signaling pathway" evidence=IEA

GO:0045740 "positive regulation of DNA replication" evidence=IEA

GO:0044212 "transcription regulatory region DNA binding" evidence=IEA

GO:0030324 "lung development" evidence=IEA

GO:0021983 "pituitary gland development" evidence=IEA

GO:0021938 "smoothened signaling pathway involved in regulation of cerebellar granule cell precursor cell proliferation" evidence=IEA

GO:0021696 "cerebellar cortex morphogenesis" evidence=IEA

GO:0009954 "proximal/distal pattern formation" evidence=IEA

GO:0009953 "dorsal/ventral pattern formation" evidence=IEA

GO:0009913 "epidermal cell differentiation" evidence=IEA

GO:0008017 "microtubule binding" evidence=IEA

GO:0007418 "ventral midline development" evidence=IEA

GO:0007283 "spermatogenesis" evidence=IEA

GO:0005929 "cilium" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0003705 "RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0003682 "chromatin binding" evidence=IEA

GO:0001649 "osteoblast differentiation" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|A6H727 GLI1 "GLI1 protein" [Bos taurus (taxid:9913)]

 Score = 174 (66.3 bits), Expect = 7.0e-12, P = 7.0e-12
 Identities = 33/63 (52%), Positives = 39/63 (61%)

Query:    11 SSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGM-PSKDKDGLGGASPSR 69
             S++KPYVC    CTKRYTDPSSLRKH+KTVHG   +  K+H+G  P      L    P R
Sbjct:   357 SNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHGPDAHVTKRHRGDGPLPRAPALSSVEPKR 416

Query:    70 SDD 72
               D
Sbjct:   417 ERD 419

GO:0090090 "negative regulation of canonical Wnt receptor signaling pathway" evidence=IEA

GO:0060032 "notochord regression" evidence=IEA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0045880 "positive regulation of smoothened signaling pathway" evidence=IEA

GO:0045740 "positive regulation of DNA replication" evidence=IEA

GO:0044212 "transcription regulatory region DNA binding" evidence=IEA

GO:0030324 "lung development" evidence=IEA

GO:0021983 "pituitary gland development" evidence=IEA

GO:0021938 "smoothened signaling pathway involved in regulation of cerebellar granule cell precursor cell proliferation" evidence=IEA

GO:0021696 "cerebellar cortex morphogenesis" evidence=IEA

GO:0009954 "proximal/distal pattern formation" evidence=IEA

GO:0009953 "dorsal/ventral pattern formation" evidence=IEA

GO:0009913 "epidermal cell differentiation" evidence=IEA

GO:0008017 "microtubule binding" evidence=IEA

GO:0007418 "ventral midline development" evidence=IEA

GO:0007283 "spermatogenesis" evidence=IEA

GO:0005929 "cilium" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0003705 "RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0003682 "chromatin binding" evidence=IEA

GO:0001649 "osteoblast differentiation" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|E2QZT1 GLI1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 172 (65.6 bits), Expect = 1.1e-11, P = 1.1e-11
 Identities = 33/63 (52%), Positives = 39/63 (61%)

Query:    11 SSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGM-PSKDKDGLGGASPSR 69
             S++KPYVC    CTKRYTDPSSLRKH+KTVHG   +  K+H+G  P      L    P R
Sbjct:   356 SNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHGPDAHVTKRHRGDGPLPRAPSLSTVEPKR 415

Query:    70 SDD 72
               D
Sbjct:   416 ERD 418

GO:0090090 "negative regulation of canonical Wnt receptor signaling pathway" evidence=IEA

GO:0060032 "notochord regression" evidence=IEA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0045880 "positive regulation of smoothened signaling pathway" evidence=IEA

GO:0045740 "positive regulation of DNA replication" evidence=IEA

GO:0044212 "transcription regulatory region DNA binding" evidence=IEA

GO:0030324 "lung development" evidence=IEA

GO:0021983 "pituitary gland development" evidence=IEA

GO:0021938 "smoothened signaling pathway involved in regulation of cerebellar granule cell precursor cell proliferation" evidence=IEA

GO:0021696 "cerebellar cortex morphogenesis" evidence=IEA

GO:0009954 "proximal/distal pattern formation" evidence=IEA

GO:0009953 "dorsal/ventral pattern formation" evidence=IEA

GO:0009913 "epidermal cell differentiation" evidence=IEA

GO:0008017 "microtubule binding" evidence=IEA

GO:0007418 "ventral midline development" evidence=IEA

GO:0007283 "spermatogenesis" evidence=IEA

GO:0005929 "cilium" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0003705 "RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0003682 "chromatin binding" evidence=IEA

GO:0001649 "osteoblast differentiation" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F1M9H1 Gli3 "Protein Gli3" [Rattus norvegicus (taxid:10116)]

 Score = 173 (66.0 bits), Expect = 1.3e-11, P = 1.3e-11
 Identities = 36/68 (52%), Positives = 42/68 (61%)

Query:    11 SSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKG----MPSKDKDGLGGAS 66
             S++KPYVC    CTKRYTDPSSLRKH+KTVHG   +  KK +G     P   +D  G  S
Sbjct:   559 SNEKPYVCKIPGCTKRYTDPSSLRKHVKTVHGPEAHVTKKQRGDMHPRPPPPRDS-GSHS 617

Query:    67 PSRSDDMP 74
              SRS   P
Sbjct:   618 QSRSPGRP 625

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P19538	CI_DROME	No assigned EC number	0.5052	0.7614	0.0594	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	109
KOG2462|consensus	279		99.74
KOG2462|consensus	279		99.7
KOG3623|consensus	1007		99.4
KOG3576|consensus	267		99.22
PHA02768	55	hypothetical protein; Provisional	99.07
KOG3623|consensus	1007		99.02
KOG1074|consensus	958		98.92
KOG1074|consensus	958		98.83
KOG3576|consensus	267		98.83
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.8
PHA00733	128	hypothetical protein	98.74
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.69
PHA00616	44	hypothetical protein	98.39
PHA00732	79	hypothetical protein	98.17
KOG3608|consensus	467		98.13
KOG3608|consensus	467		97.99
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.97
PLN03086	567	PRLI-interacting factor K; Provisional	97.62
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.52
KOG3993|consensus	500		97.51
PLN03086	567	PRLI-interacting factor K; Provisional	97.5
PHA00616	44	hypothetical protein	97.48
PHA02768	55	hypothetical protein; Provisional	97.47
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.18
PHA00733	128	hypothetical protein	97.15
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	96.89
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	96.78
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.73
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	96.66
smart00355	26	ZnF_C2H2 zinc finger.	96.64
PRK04860	160	hypothetical protein; Provisional	96.57
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	96.15
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	94.78
COG5048	467	FOG: Zn-finger [General function prediction only]	94.46
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	93.68
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	93.6
KOG3993|consensus	500		93.37
PHA00732	79	hypothetical protein	93.22
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	93.2
COG5048	467	FOG: Zn-finger [General function prediction only]	92.68
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	90.96
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	90.72
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	90.14
KOG2893|consensus	341		83.68
COG5189	423	SFP1 Putative transcriptional repressor regulating	83.17
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	82.66

>KOG2462|consensus

Probab=99.74  E-value=3.9e-19  Score=118.73  Aligned_cols=73  Identities=22%  Similarity=0.328  Sum_probs=58.8

Q ss_pred             chhhhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccc
Q psy4019           2 KLNLAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTAS   81 (109)
Q Consensus         2 ~l~~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~   81 (109)
                      .|+.|+|+|+  -++.|.+  |||.|.+..-|+-|+|+|+|||||.|.            .|+|+|..+++|+.|++||+
T Consensus       176 ALkMHirTH~--l~c~C~i--CGKaFSRPWLLQGHiRTHTGEKPF~C~------------hC~kAFADRSNLRAHmQTHS  239 (279)
T KOG2462|consen  176 ALKMHIRTHT--LPCECGI--CGKAFSRPWLLQGHIRTHTGEKPFSCP------------HCGKAFADRSNLRAHMQTHS  239 (279)
T ss_pred             HHhhHhhccC--CCccccc--ccccccchHHhhcccccccCCCCccCC------------cccchhcchHHHHHHHHhhc
Confidence            4677888776  5778888  888888888888888888888888888            88888888888888888888


Q ss_pred             cCCCCCCCC
Q psy4019          82 VSSPSIKSE   90 (109)
Q Consensus        82 ~~~p~~~~~   90 (109)
                      ..+.|.+..
T Consensus       240 ~~K~~qC~~  248 (279)
T KOG2462|consen  240 DVKKHQCPR  248 (279)
T ss_pred             CCccccCcc
Confidence            887776643

>KOG2462|consensus

Probab=99.70  E-value=1.2e-18  Score=116.40  Aligned_cols=65  Identities=22%  Similarity=0.290  Sum_probs=61.7

Q ss_pred             CchhhhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccc
Q psy4019           1 MKLNLAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKT   79 (109)
Q Consensus         1 ~~l~~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~   79 (109)
                      |-|+.|+|+|+||+||.|..  |+|+|...++|+.|+++|.+.|+|+|.            .|+|.|++.+.|.+|...
T Consensus       201 WLLQGHiRTHTGEKPF~C~h--C~kAFADRSNLRAHmQTHS~~K~~qC~------------~C~KsFsl~SyLnKH~ES  265 (279)
T KOG2462|consen  201 WLLQGHIRTHTGEKPFSCPH--CGKAFADRSNLRAHMQTHSDVKKHQCP------------RCGKSFALKSYLNKHSES  265 (279)
T ss_pred             HHhhcccccccCCCCccCCc--ccchhcchHHHHHHHHhhcCCccccCc------------chhhHHHHHHHHHHhhhh
Confidence            35889999999999999999  999999999999999999999999999            999999999999999863

>KOG3623|consensus

Probab=99.40  E-value=5.2e-14  Score=104.45  Aligned_cols=64  Identities=22%  Similarity=0.237  Sum_probs=60.3

Q ss_pred             CchhhhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCcccccc
Q psy4019           1 MKLNLAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAK   78 (109)
Q Consensus         1 ~~l~~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~   78 (109)
                      +.|.+|.--|+|.+||.|.+  |.|+|..+..|..|+|+|.|+|||+|.            -|+|.|+++..+..||.
T Consensus       908 SSLaRHKYEHsGqRPyqC~i--CkKAFKHKHHLtEHkRLHSGEKPfQCd------------KClKRFSHSGSYSQHMN  971 (1007)
T KOG3623|consen  908 SSLARHKYEHSGQRPYQCII--CKKAFKHKHHLTEHKRLHSGEKPFQCD------------KCLKRFSHSGSYSQHMN  971 (1007)
T ss_pred             HHHHHhhhhhcCCCCcccch--hhHhhhhhhhhhhhhhhccCCCcchhh------------hhhhhcccccchHhhhc
Confidence            46888999999999999999  999999999999999999999999999            89999999999988885

>KOG3576|consensus

Probab=99.22  E-value=6e-13  Score=86.20  Aligned_cols=66  Identities=23%  Similarity=0.272  Sum_probs=56.5

Q ss_pred             hhhhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCcccccccccc
Q psy4019           3 LNLAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASV   82 (109)
Q Consensus         3 l~~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~   82 (109)
                      |.+|++-|...+.|.|..  ||++|...-+|++|.|+|+|.+||+|.            .|+++|.++-.|..|.+..++
T Consensus       133 lnrh~kch~~vkr~lct~--cgkgfndtfdlkrh~rthtgvrpykc~------------~c~kaftqrcsleshl~kvhg  198 (267)
T KOG3576|consen  133 LNRHLKCHSDVKRHLCTF--CGKGFNDTFDLKRHTRTHTGVRPYKCS------------LCEKAFTQRCSLESHLKKVHG  198 (267)
T ss_pred             HHHHhhhccHHHHHHHhh--ccCcccchhhhhhhhccccCccccchh------------hhhHHHHhhccHHHHHHHHcC
Confidence            577888888888899998  999999999999999999999999999            889999888888877765443

>PHA02768 hypothetical protein; Provisional

Probab=99.07  E-value=1.2e-10  Score=60.80  Aligned_cols=44  Identities=16%  Similarity=0.242  Sum_probs=40.5

Q ss_pred             CcccccCCCCCcCCChhHHHHHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCcc
Q psy4019          15 PYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMP   74 (109)
Q Consensus        15 p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~   74 (109)
                      -|.|+.  ||+.|....+|..|+++|+  ++|+|.            .|++.|.+.+.|.
T Consensus         5 ~y~C~~--CGK~Fs~~~~L~~H~r~H~--k~~kc~------------~C~k~f~~~s~l~   48 (55)
T PHA02768          5 GYECPI--CGEIYIKRKSMITHLRKHN--TNLKLS------------NCKRISLRTGEYI   48 (55)
T ss_pred             ccCcch--hCCeeccHHHHHHHHHhcC--CcccCC------------cccceecccceeE
Confidence            378999  9999999999999999999  799999            9999999888775

>KOG3623|consensus

Probab=99.02  E-value=4.3e-11  Score=89.27  Aligned_cols=66  Identities=18%  Similarity=0.297  Sum_probs=61.6

Q ss_pred             CCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCCC
Q psy4019          11 SSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKSE   90 (109)
Q Consensus        11 ~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~~   90 (109)
                      +.+..|.|+.  |+|+|...+.|.+|+--|+|.+||+|.            +|.|+|.+..+|..|++.|++.+||.|..
T Consensus       890 te~gmyaCDq--CDK~FqKqSSLaRHKYEHsGqRPyqC~------------iCkKAFKHKHHLtEHkRLHSGEKPfQCdK  955 (1007)
T KOG3623|consen  890 TEDGMYACDQ--CDKAFQKQSSLARHKYEHSGQRPYQCI------------ICKKAFKHKHHLTEHKRLHSGEKPFQCDK  955 (1007)
T ss_pred             CccccchHHH--HHHHHHhhHHHHHhhhhhcCCCCcccc------------hhhHhhhhhhhhhhhhhhccCCCcchhhh
Confidence            3456899999  999999999999999999999999999            99999999999999999999999998754

>KOG1074|consensus

Probab=98.92  E-value=5e-10  Score=84.59  Aligned_cols=70  Identities=13%  Similarity=0.311  Sum_probs=48.7

Q ss_pred             chhhhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCC----cccCCCCCCCCCCCCCCCCCcCCCCCCccccc
Q psy4019           2 KLNLAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHC----YANKKHKGMPSKDKDGLGGASPSRSDDMPLSA   77 (109)
Q Consensus         2 ~l~~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp----~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~   77 (109)
                      .|+.|.|+|+||+||+|.+  ||++|..+.+|+.|+-+|....+    |.|+.         .-.|-+.|...-.|..|+
T Consensus       620 aLqmHyrtHtGERPFkCKi--CgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~---------~~ic~~kftn~V~lpQhI  688 (958)
T KOG1074|consen  620 ALQMHYRTHTGERPFKCKI--CGRAFTTKGNLKAHMSVHKAKPPARVQFSCPS---------TFICQKKFTNAVTLPQHI  688 (958)
T ss_pred             hhhhhhhcccCcCcccccc--ccchhccccchhhcccccccCccccccccCCc---------hhhhcccccccccccceE
Confidence            5777788888888888877  88888888888887777765433    44441         014667777777777777


Q ss_pred             ccccc
Q psy4019          78 KTASV   82 (109)
Q Consensus        78 ~~~~~   82 (109)
                      ++|.+
T Consensus       689 riH~~  693 (958)
T KOG1074|consen  689 RIHLG  693 (958)
T ss_pred             EeecC
Confidence            77764

>KOG1074|consensus

Probab=98.83  E-value=1.7e-09  Score=81.81  Aligned_cols=58  Identities=19%  Similarity=0.347  Sum_probs=53.6

Q ss_pred             CcccccCCCCCcCCChhHHHHHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCC
Q psy4019          15 PYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPS   86 (109)
Q Consensus        15 p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~   86 (109)
                      +++|..  |.|.|...+.|+.|.|.|+|++||+|+            +||..|+.+.+|++|...|....|.
T Consensus       353 khkCr~--CakvfgS~SaLqiHlRSHTGERPfqCn------------vCG~~FSTkGNLKvH~~rH~e~~p~  410 (958)
T KOG1074|consen  353 KHKCRF--CAKVFGSDSALQIHLRSHTGERPFQCN------------VCGNRFSTKGNLKVHFQRHREKYPH  410 (958)
T ss_pred             cchhhh--hHhhcCchhhhhhhhhccCCCCCeeec------------ccccccccccceeeeeeeccccCCc
Confidence            467999  999999999999999999999999999            9999999999999999988776644

>KOG3576|consensus

Probab=98.83  E-value=4.5e-10  Score=72.97  Aligned_cols=66  Identities=18%  Similarity=0.239  Sum_probs=60.6

Q ss_pred             CCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCCCCC
Q psy4019          13 QKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKSEVS   92 (109)
Q Consensus        13 ~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~~~~   92 (109)
                      ...|.|.+  |+|+|....-|.+|++.|...|.|-|.            .||+.|...-+|++|+++|++..||-++.-.
T Consensus       115 ~d~ftCrv--CgK~F~lQRmlnrh~kch~~vkr~lct------------~cgkgfndtfdlkrh~rthtgvrpykc~~c~  180 (267)
T KOG3576|consen  115 QDSFTCRV--CGKKFGLQRMLNRHLKCHSDVKRHLCT------------FCGKGFNDTFDLKRHTRTHTGVRPYKCSLCE  180 (267)
T ss_pred             CCeeeeeh--hhhhhhHHHHHHHHhhhccHHHHHHHh------------hccCcccchhhhhhhhccccCccccchhhhh
Confidence            34589999  999999999999999999999999999            9999999999999999999999999876543

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.80  E-value=2.9e-09  Score=47.74  Aligned_cols=25  Identities=40%  Similarity=0.550  Sum_probs=22.9

Q ss_pred             HHHHHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCC
Q psy4019          32 SLRKHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPS   68 (109)
Q Consensus        32 ~l~~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~   68 (109)
                      +|.+|+++|++++||.|+            .|++.|.
T Consensus         1 ~l~~H~~~H~~~k~~~C~------------~C~k~F~   25 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCP------------YCGKSFS   25 (26)
T ss_dssp             HHHHHHHHHSSSSSEEES------------SSSEEES
T ss_pred             CHHHHhhhcCCCCCCCCC------------CCcCeeC
Confidence            588999999999999999            9999885

...

>PHA00733 hypothetical protein

Probab=98.74  E-value=4.1e-09  Score=64.64  Aligned_cols=62  Identities=23%  Similarity=0.327  Sum_probs=51.5

Q ss_pred             hhhhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccc
Q psy4019           3 LNLAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTAS   81 (109)
Q Consensus         3 l~~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~   81 (109)
                      |..|+..+ +.+||.|..  |++.|.....|..|++.+  +.+|.|.            .|++.|.....|..|+...+
T Consensus        62 l~~~~~~~-~~kPy~C~~--Cgk~Fss~s~L~~H~r~h--~~~~~C~------------~CgK~F~~~~sL~~H~~~~h  123 (128)
T PHA00733         62 LYKLLTSK-AVSPYVCPL--CLMPFSSSVSLKQHIRYT--EHSKVCP------------VCGKEFRNTDSTLDHVCKKH  123 (128)
T ss_pred             HHhhcccC-CCCCccCCC--CCCcCCCHHHHHHHHhcC--CcCccCC------------CCCCccCCHHHHHHHHHHhc
Confidence            44555444 478999999  999999999999999876  4579999            99999999999988876544

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.69  E-value=2.4e-09  Score=47.96  Aligned_cols=25  Identities=28%  Similarity=0.607  Sum_probs=23.2

Q ss_pred             chhhhccccCCCCCcccccCCCCCcCC
Q psy4019           2 KLNLAYPLLSSQKPYVCGEENCTKRYT   28 (109)
Q Consensus         2 ~l~~H~~~h~~~~p~~C~~~~C~k~f~   28 (109)
                      +|..|+++|++++||.|+.  |++.|.
T Consensus         1 ~l~~H~~~H~~~k~~~C~~--C~k~F~   25 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPY--CGKSFS   25 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESS--SSEEES
T ss_pred             CHHHHhhhcCCCCCCCCCC--CcCeeC
Confidence            5889999999999999999  999885

...

>PHA00616 hypothetical protein

Probab=98.39  E-value=1.3e-07  Score=47.15  Aligned_cols=33  Identities=18%  Similarity=0.399  Sum_probs=31.4

Q ss_pred             CcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019          15 PYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus        15 p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      ||.|..  ||+.|.....|.+|++.|++++++.|+
T Consensus         1 pYqC~~--CG~~F~~~s~l~~H~r~~hg~~~~~~~   33 (44)
T PHA00616          1 MYQCLR--CGGIFRKKKEVIEHLLSVHKQNKLTLE   33 (44)
T ss_pred             CCccch--hhHHHhhHHHHHHHHHHhcCCCcccee
Confidence            689999  999999999999999999999999986

>PHA00732 hypothetical protein

Probab=98.17  E-value=2e-06  Score=48.45  Aligned_cols=46  Identities=11%  Similarity=0.068  Sum_probs=37.7

Q ss_pred             CcccccCCCCCcCCChhHHHHHhhh-hcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCcccccccc
Q psy4019          15 PYVCGEENCTKRYTDPSSLRKHIKT-VHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTA   80 (109)
Q Consensus        15 p~~C~~~~C~k~f~~~~~l~~H~~~-h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~   80 (109)
                      ||.|..  |++.|.....|..|++. |.+   +.|+            .|++.|.   .+..|.++.
T Consensus         1 py~C~~--Cgk~F~s~s~Lk~H~r~~H~~---~~C~------------~CgKsF~---~l~~H~~~~   47 (79)
T PHA00732          1 MFKCPI--CGFTTVTLFALKQHARRNHTL---TKCP------------VCNKSYR---RLNQHFYSQ   47 (79)
T ss_pred             CccCCC--CCCccCCHHHHHHHhhcccCC---CccC------------CCCCEeC---Chhhhhccc
Confidence            588999  99999999999999984 653   6899            9999996   566676543

>KOG3608|consensus

Probab=98.13  E-value=8.5e-07  Score=62.12  Aligned_cols=69  Identities=17%  Similarity=0.169  Sum_probs=46.5

Q ss_pred             hhhhccccCCCCCcccccCCCCCcCCChhHHHHHhhh-hcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccc
Q psy4019           3 LNLAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKT-VHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTAS   81 (109)
Q Consensus         3 l~~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~-h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~   81 (109)
                      |..|++.|.  .-|+|+.  |.-+....+.|..|++. |...|||+|.            .|++.|.+.++|.+|..+|+
T Consensus       253 L~~Hv~rHv--n~ykCpl--Cdmtc~~~ssL~~H~r~rHs~dkpfKCd------------~Cd~~c~~esdL~kH~~~HS  316 (467)
T KOG3608|consen  253 LKSHVVRHV--NCYKCPL--CDMTCSSASSLTTHIRYRHSKDKPFKCD------------ECDTRCVRESDLAKHVQVHS  316 (467)
T ss_pred             HHHHHHHhh--hcccccc--cccCCCChHHHHHHHHhhhccCCCcccc------------chhhhhccHHHHHHHHHhcc
Confidence            445555554  3567777  77777777777777774 6667777777            77777777777777777666


Q ss_pred             cCCCCCC
Q psy4019          82 VSSPSIK   88 (109)
Q Consensus        82 ~~~p~~~   88 (109)
                       ..-|.+
T Consensus       317 -~~~y~C  322 (467)
T KOG3608|consen  317 -KTVYQC  322 (467)
T ss_pred             -ccceec
Confidence             334443

>KOG3608|consensus

Probab=97.99  E-value=8.5e-07  Score=62.12  Aligned_cols=46  Identities=28%  Similarity=0.528  Sum_probs=37.4

Q ss_pred             chhhhccc-cCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccCC
Q psy4019           2 KLNLAYPL-LSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKK   50 (109)
Q Consensus         2 ~l~~H~~~-h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~~   50 (109)
                      .|.+|++. |..++||+|..  |.+.+.....|.+|...|. +..|.|+.
T Consensus       278 sL~~H~r~rHs~dkpfKCd~--Cd~~c~~esdL~kH~~~HS-~~~y~C~h  324 (467)
T KOG3608|consen  278 SLTTHIRYRHSKDKPFKCDE--CDTRCVRESDLAKHVQVHS-KTVYQCEH  324 (467)
T ss_pred             HHHHHHHhhhccCCCccccc--hhhhhccHHHHHHHHHhcc-ccceecCC
Confidence            57788875 88889999999  9999999999999987776 45577764

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.97  E-value=4.8e-06  Score=57.72  Aligned_cols=55  Identities=22%  Similarity=0.440  Sum_probs=46.2

Q ss_pred             CCCCcccccCCCCCcCCChhHHHHHhhh-h------------------cCCCCcccCCCCCCCCCCCCCCCCCcCCCCCC
Q psy4019          12 SQKPYVCGEENCTKRYTDPSSLRKHIKT-V------------------HGEHCYANKKHKGMPSKDKDGLGGASPSRSDD   72 (109)
Q Consensus        12 ~~~p~~C~~~~C~k~f~~~~~l~~H~~~-h------------------~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~   72 (109)
                      +++||+|++++|.|++...-.|+-|+.- |                  ...|||.|+            .|+|.+.....
T Consensus       346 d~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCe------------vC~KRYKNlNG  413 (423)
T COG5189         346 DGKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCE------------VCDKRYKNLNG  413 (423)
T ss_pred             cCceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceecc------------ccchhhccCcc
Confidence            4599999999999999999999988642 2                  124899999            99999998888


Q ss_pred             cccccc
Q psy4019          73 MPLSAK   78 (109)
Q Consensus        73 l~~H~~   78 (109)
                      |+.|++
T Consensus       414 LKYHr~  419 (423)
T COG5189         414 LKYHRK  419 (423)
T ss_pred             ceeccc
Confidence            988875

>PLN03086 PRLI-interacting factor K; Provisional

Probab=97.62  E-value=3.3e-05  Score=57.62  Aligned_cols=42  Identities=10%  Similarity=0.263  Sum_probs=27.9

Q ss_pred             chhhhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           2 KLNLAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         2 ~l~~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      .|..|+.+|+  +++.|.   |++.+ ....|..|+..|...+++.|.
T Consensus       467 ~LekH~~~~H--kpv~Cp---Cg~~~-~R~~L~~H~~thCp~Kpi~C~  508 (567)
T PLN03086        467 EMEKHMKVFH--EPLQCP---CGVVL-EKEQMVQHQASTCPLRLITCR  508 (567)
T ss_pred             HHHHHHHhcC--CCccCC---CCCCc-chhHHHhhhhccCCCCceeCC
Confidence            3556766653  567774   77544 456777777777777777777

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.52  E-value=4.9e-05  Score=32.52  Aligned_cols=23  Identities=30%  Similarity=0.792  Sum_probs=20.8

Q ss_pred             cccccCCCCCcCCChhHHHHHhhhh
Q psy4019          16 YVCGEENCTKRYTDPSSLRKHIKTV   40 (109)
Q Consensus        16 ~~C~~~~C~k~f~~~~~l~~H~~~h   40 (109)
                      |.|..  |++.|.....|..|++.|
T Consensus         1 y~C~~--C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPI--CGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETT--TTEEESSHHHHHHHHHHH
T ss_pred             CCCCC--CCCccCCHHHHHHHHhHC
Confidence            67988  999999999999999864

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>KOG3993|consensus

Probab=97.51  E-value=9.6e-06  Score=58.01  Aligned_cols=66  Identities=20%  Similarity=0.232  Sum_probs=48.5

Q ss_pred             hhhhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhc--------CCC-------------------------CcccC
Q psy4019           3 LNLAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVH--------GEH-------------------------CYANK   49 (109)
Q Consensus         3 l~~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~--------~~k-------------------------p~~C~   49 (109)
                      |..|.-...-...|+|..  |+|.|....+|..|.|.|.        +..                         -|.|.
T Consensus       283 LAQHrC~RIV~vEYrCPE--C~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~rsg~dss~gi~~C~  360 (500)
T KOG3993|consen  283 LAQHRCPRIVHVEYRCPE--CDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAERSGDDSSSGIFSCH  360 (500)
T ss_pred             HhhccCCeeEEeeecCCc--ccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhccccCCcccCceeecH
Confidence            334433222334699999  9999999999999988763        212                         25666


Q ss_pred             CCCCCCCCCCCCCCCCcCCCCCCcccccccccc
Q psy4019          50 KHKGMPSKDKDGLGGASPSRSDDMPLSAKTASV   82 (109)
Q Consensus        50 ~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~   82 (109)
                                  .|++.|.+.-.|++|.-+|+.
T Consensus       361 ------------~C~KkFrRqAYLrKHqlthq~  381 (500)
T KOG3993|consen  361 ------------TCGKKFRRQAYLRKHQLTHQR  381 (500)
T ss_pred             ------------HhhhhhHHHHHHHHhHHhhhc
Confidence                        899999999999999776664

>PLN03086 PRLI-interacting factor K; Provisional

Probab=97.50  E-value=5.6e-05  Score=56.42  Aligned_cols=59  Identities=14%  Similarity=0.215  Sum_probs=30.0

Q ss_pred             CCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCCC
Q psy4019          13 QKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKSE   90 (109)
Q Consensus        13 ~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~~   90 (109)
                      +..+.|..  |++.|. ...|..|++.++  +++.|+             |++.+ .+..|..|+.++....++.|..
T Consensus       451 ~~H~~C~~--Cgk~f~-~s~LekH~~~~H--kpv~Cp-------------Cg~~~-~R~~L~~H~~thCp~Kpi~C~f  509 (567)
T PLN03086        451 KNHVHCEK--CGQAFQ-QGEMEKHMKVFH--EPLQCP-------------CGVVL-EKEQMVQHQASTCPLRLITCRF  509 (567)
T ss_pred             ccCccCCC--CCCccc-hHHHHHHHHhcC--CCccCC-------------CCCCc-chhHHHhhhhccCCCCceeCCC
Confidence            34455666  666654 445666666543  455664             33333 3345555555555555554443

>PHA00616 hypothetical protein

Probab=97.48  E-value=5.2e-06  Score=41.42  Aligned_cols=32  Identities=6%  Similarity=-0.060  Sum_probs=29.1

Q ss_pred             CcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCC
Q psy4019          45 CYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIK   88 (109)
Q Consensus        45 p~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~   88 (109)
                      ||+|.            .||+.|....+|..|++.+++..+..+
T Consensus         1 pYqC~------------~CG~~F~~~s~l~~H~r~~hg~~~~~~   32 (44)
T PHA00616          1 MYQCL------------RCGGIFRKKKEVIEHLLSVHKQNKLTL   32 (44)
T ss_pred             CCccc------------hhhHHHhhHHHHHHHHHHhcCCCccce
Confidence            68999            999999999999999999999877654

>PHA02768 hypothetical protein; Provisional

Probab=97.47  E-value=1.7e-05  Score=41.45  Aligned_cols=31  Identities=13%  Similarity=0.067  Sum_probs=26.1

Q ss_pred             CcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCC
Q psy4019          45 CYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKS   89 (109)
Q Consensus        45 p~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~   89 (109)
                      -|+|+            .||+.|.+.++|..|+++|+  +++.++
T Consensus         5 ~y~C~------------~CGK~Fs~~~~L~~H~r~H~--k~~kc~   35 (55)
T PHA02768          5 GYECP------------ICGEIYIKRKSMITHLRKHN--TNLKLS   35 (55)
T ss_pred             ccCcc------------hhCCeeccHHHHHHHHHhcC--CcccCC
Confidence            37899            99999999999999999999  455333

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.18  E-value=0.00018  Score=31.95  Aligned_cols=25  Identities=36%  Similarity=0.829  Sum_probs=22.6

Q ss_pred             CcccccCCCCCcCCChhHHHHHhhhhc
Q psy4019          15 PYVCGEENCTKRYTDPSSLRKHIKTVH   41 (109)
Q Consensus        15 p~~C~~~~C~k~f~~~~~l~~H~~~h~   41 (109)
                      +|.|..  |++.|.....|..|++.|.
T Consensus         1 ~~~C~~--C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDE--CGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETT--TTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCc--cCCccCChhHHHHHhHHhc
Confidence            588999  9999999999999998764

>PHA00733 hypothetical protein

Probab=97.15  E-value=0.00016  Score=44.37  Aligned_cols=62  Identities=15%  Similarity=0.065  Sum_probs=45.5

Q ss_pred             CCCcccccCCCCCcCCChhHHHHH--hh---hhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCC
Q psy4019          13 QKPYVCGEENCTKRYTDPSSLRKH--IK---TVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSI   87 (109)
Q Consensus        13 ~~p~~C~~~~C~k~f~~~~~l~~H--~~---~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~   87 (109)
                      .+++.|..  |.+.|.....|..+  .+   .+.+.+||.|.            .|++.|.....|..|++.+.  .++.
T Consensus        38 ~~~~~~~~--~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~------------~Cgk~Fss~s~L~~H~r~h~--~~~~  101 (128)
T PHA00733         38 QKRLIRAV--VKTLIYNPQLLDESSYLYKLLTSKAVSPYVCP------------LCLMPFSSSVSLKQHIRYTE--HSKV  101 (128)
T ss_pred             hhhHHHHH--HhhhccChhhhcchHHHHhhcccCCCCCccCC------------CCCCcCCCHHHHHHHHhcCC--cCcc
Confidence            46788999  99887776666554  11   23457899999            99999999999999998652  3454


Q ss_pred             CCC
Q psy4019          88 KSE   90 (109)
Q Consensus        88 ~~~   90 (109)
                      +..
T Consensus       102 C~~  104 (128)
T PHA00733        102 CPV  104 (128)
T ss_pred             CCC
Confidence            444

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=96.89  E-value=0.00076  Score=28.56  Aligned_cols=23  Identities=35%  Similarity=0.772  Sum_probs=19.0

Q ss_pred             cccccCCCCCcCCChhHHHHHhhhh
Q psy4019          16 YVCGEENCTKRYTDPSSLRKHIKTV   40 (109)
Q Consensus        16 ~~C~~~~C~k~f~~~~~l~~H~~~h   40 (109)
                      |.|..  |++.|.....|..|++.+
T Consensus         1 ~~C~~--C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPI--CGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SS--TS-EESSHHHHHHHHHHH
T ss_pred             CCCcC--CCCcCCcHHHHHHHHHhh
Confidence            67999  999999999999999875

...

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=96.78  E-value=0.00085  Score=34.93  Aligned_cols=50  Identities=18%  Similarity=0.262  Sum_probs=36.6

Q ss_pred             CcccccCCCCCcCCChhHHHHHhhh-hcCC-CCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccc
Q psy4019          15 PYVCGEENCTKRYTDPSSLRKHIKT-VHGE-HCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTAS   81 (109)
Q Consensus        15 p~~C~~~~C~k~f~~~~~l~~H~~~-h~~~-kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~   81 (109)
                      -|.|+.  |++ ......|..|... |..+ +.+.|+            .|...+.  .+|..|+...+
T Consensus         2 ~f~CP~--C~~-~~~~~~L~~H~~~~H~~~~~~v~CP------------iC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    2 SFTCPY--CGK-GFSESSLVEHCEDEHRSESKNVVCP------------ICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             CcCCCC--CCC-ccCHHHHHHHHHhHCcCCCCCccCC------------Cchhhhh--hHHHHHHHHhc
Confidence            488999  999 4567789999764 5543 579999            8877553  47777876543

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.73  E-value=0.0017  Score=33.32  Aligned_cols=34  Identities=24%  Similarity=0.427  Sum_probs=24.2

Q ss_pred             cCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCC
Q psy4019          10 LSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHC   45 (109)
Q Consensus        10 h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp   45 (109)
                      +..+.|..|+.  |+..+.+..+|.+|+.+..+.||
T Consensus        19 ~~S~~PatCP~--C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   19 SQSEQPATCPI--CGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             CTTS--EE-TT--T--EESSHHHHHHHHHHHTTTS-
T ss_pred             hccCCCCCCCc--chhhccchhhHHHHHHHHhcccC
Confidence            34567899999  99999999999999998877765

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.66  E-value=3.7e-05  Score=32.92  Aligned_cols=18  Identities=17%  Similarity=0.220  Sum_probs=16.5

Q ss_pred             CCCCcCCCCCCccccccc
Q psy4019          62 LGGASPSRSDDMPLSAKT   79 (109)
Q Consensus        62 ~C~~~f~~~~~l~~H~~~   79 (109)
                      .|++.|.....|..|++.
T Consensus         5 ~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    5 ICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             TTTEEESSHHHHHHHHHH
T ss_pred             CCCCccCCHHHHHHHHhH
Confidence            999999999999999875

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>smart00355 ZnF_C2H2 zinc finger

Probab=96.64  E-value=0.0025  Score=27.24  Aligned_cols=24  Identities=38%  Similarity=0.807  Sum_probs=21.1

Q ss_pred             cccccCCCCCcCCChhHHHHHhhhhc
Q psy4019          16 YVCGEENCTKRYTDPSSLRKHIKTVH   41 (109)
Q Consensus        16 ~~C~~~~C~k~f~~~~~l~~H~~~h~   41 (109)
                      |.|..  |++.|.....|..|++.|.
T Consensus         1 ~~C~~--C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPE--CGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCC--CcchhCCHHHHHHHHHHhc
Confidence            57888  9999999999999998664

>PRK04860 hypothetical protein; Provisional

Probab=96.57  E-value=0.0019  Score=41.08  Aligned_cols=38  Identities=29%  Similarity=0.616  Sum_probs=31.7

Q ss_pred             CcccccCCCCCcCCChhHHHHHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCC
Q psy4019          15 PYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRS   70 (109)
Q Consensus        15 p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~   70 (109)
                      +|.|.   |+.   ....+.+|.++++++++|.|.            .|+..|...
T Consensus       119 ~Y~C~---C~~---~~~~~rrH~ri~~g~~~YrC~------------~C~~~l~~~  156 (160)
T PRK04860        119 PYRCK---CQE---HQLTVRRHNRVVRGEAVYRCR------------RCGETLVFK  156 (160)
T ss_pred             EEEcC---CCC---eeCHHHHHHHHhcCCccEECC------------CCCceeEEe
Confidence            58895   887   567789999999999999999            888877543

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=96.15  E-value=0.00025  Score=31.48  Aligned_cols=25  Identities=8%  Similarity=0.028  Sum_probs=22.2

Q ss_pred             CcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccc
Q psy4019          45 CYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTAS   81 (109)
Q Consensus        45 p~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~   81 (109)
                      +|+|.            .|++.|.....|..|++.+.
T Consensus         1 ~~~C~------------~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECD------------ECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEET------------TTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCC------------ccCCccCChhHHHHHhHHhc
Confidence            58899            99999999999999998764

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=94.78  E-value=0.015  Score=24.96  Aligned_cols=23  Identities=30%  Similarity=0.856  Sum_probs=20.1

Q ss_pred             cccccCCCCCcCCChhHHHHHhhhh
Q psy4019          16 YVCGEENCTKRYTDPSSLRKHIKTV   40 (109)
Q Consensus        16 ~~C~~~~C~k~f~~~~~l~~H~~~h   40 (109)
                      |.|..  |++.|.....+..|++.+
T Consensus         1 ~~C~~--C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDI--CNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETT--TTEEESSHHHHHHHHTTH
T ss_pred             CCCCC--CCCCcCCHHHHHHHHCcC
Confidence            57888  999999999999998753

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=94.46  E-value=0.031  Score=39.56  Aligned_cols=63  Identities=22%  Similarity=0.352  Sum_probs=52.5

Q ss_pred             CCcccccCCCCCcCCChhHHHHHhh--hhcCC--CCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCC
Q psy4019          14 KPYVCGEENCTKRYTDPSSLRKHIK--TVHGE--HCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIK   88 (109)
Q Consensus        14 ~p~~C~~~~C~k~f~~~~~l~~H~~--~h~~~--kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~   88 (109)
                      .++.|..  |...|.....+..|.+  .|.++  +++.|..-          .|++.|.+.+.+..|...++...+...
T Consensus       288 ~~~~~~~--~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~  354 (467)
T COG5048         288 LPIKSKQ--CNISFSRSSPLTRHLRSVNHSGESLKPFSCPYS----------LCGKLFSRNDALKRHILLHTSISPAKE  354 (467)
T ss_pred             cCCCCcc--ccCCccccccccccccccccccccCCceeeecc----------CCCccccccccccCCcccccCCCcccc
Confidence            3577887  9999999999999999  79999  99999832          589999999999999998888766533

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=93.68  E-value=0.053  Score=23.02  Aligned_cols=23  Identities=35%  Similarity=0.788  Sum_probs=17.4

Q ss_pred             cccccCCCCCcCCChhHHHHHhhhhc
Q psy4019          16 YVCGEENCTKRYTDPSSLRKHIKTVH   41 (109)
Q Consensus        16 ~~C~~~~C~k~f~~~~~l~~H~~~h~   41 (109)
                      |.|..  |..... ...|.+|++.+.
T Consensus         1 y~C~~--C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPH--CSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SS--SS-EES-HHHHHHHHHHHH
T ss_pred             CCCCC--CCCcCC-HHHHHHHHHhhC
Confidence            67988  998887 889999988753

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=93.60  E-value=0.0038  Score=32.04  Aligned_cols=34  Identities=15%  Similarity=0.172  Sum_probs=23.9

Q ss_pred             cCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCC
Q psy4019          41 HGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPS   86 (109)
Q Consensus        41 ~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~   86 (109)
                      ..+.|-.|+            .|+..+.+..+|.+|+...+..+|-
T Consensus        20 ~S~~PatCP------------~C~a~~~~srnLrRHle~~H~~k~~   53 (54)
T PF09237_consen   20 QSEQPATCP------------ICGAVIRQSRNLRRHLEIRHFKKPG   53 (54)
T ss_dssp             TTS--EE-T------------TT--EESSHHHHHHHHHHHTTTS--
T ss_pred             ccCCCCCCC------------cchhhccchhhHHHHHHHHhcccCC
Confidence            457889999            9999999999999999988887663

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>KOG3993|consensus

Probab=93.37  E-value=0.014  Score=42.41  Aligned_cols=55  Identities=16%  Similarity=0.196  Sum_probs=44.3

Q ss_pred             CcccccCCCCCcCCChhHHHHHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccC
Q psy4019          15 PYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVS   83 (109)
Q Consensus        15 p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~   83 (109)
                      -|.|..  |...|...=.|.+|+-.-.-..-|+|+            +|+|.|+..-+|.-|.+.|...
T Consensus       267 dyiCqL--CK~kYeD~F~LAQHrC~RIV~vEYrCP------------EC~KVFsCPANLASHRRWHKPR  321 (500)
T KOG3993|consen  267 DYICQL--CKEKYEDAFALAQHRCPRIVHVEYRCP------------ECDKVFSCPANLASHRRWHKPR  321 (500)
T ss_pred             HHHHHH--HHHhhhhHHHHhhccCCeeEEeeecCC------------cccccccCchhhhhhhcccCCc
Confidence            388999  998888888888886433323349999            9999999999999999998754

>PHA00732 hypothetical protein

Probab=93.22  E-value=0.021  Score=32.14  Aligned_cols=25  Identities=8%  Similarity=0.082  Sum_probs=21.9

Q ss_pred             CcccCCCCCCCCCCCCCCCCCcCCCCCCccccccc-cc
Q psy4019          45 CYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKT-AS   81 (109)
Q Consensus        45 p~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~-~~   81 (109)
                      ||.|.            .|++.|.+...|..|++. |.
T Consensus         1 py~C~------------~Cgk~F~s~s~Lk~H~r~~H~   26 (79)
T PHA00732          1 MFKCP------------ICGFTTVTLFALKQHARRNHT   26 (79)
T ss_pred             CccCC------------CCCCccCCHHHHHHHhhcccC
Confidence            58899            999999999999999984 54

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=93.20  E-value=0.026  Score=24.88  Aligned_cols=22  Identities=27%  Similarity=0.872  Sum_probs=19.2

Q ss_pred             cccccCCCCCcCCChhHHHHHhhh
Q psy4019          16 YVCGEENCTKRYTDPSSLRKHIKT   39 (109)
Q Consensus        16 ~~C~~~~C~k~f~~~~~l~~H~~~   39 (109)
                      |.|..  |++.|.....+..|++.
T Consensus         2 ~~C~~--C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDA--CDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTT--TTBBBSSHHHHHCCTTS
T ss_pred             CCccc--CCCCcCCHHHHHHHHcc
Confidence            67988  99999999999988764

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=92.68  E-value=0.12  Score=36.55  Aligned_cols=46  Identities=24%  Similarity=0.359  Sum_probs=40.3

Q ss_pred             chhhhcc--ccCCC--CCcccc--cCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           2 KLNLAYP--LLSSQ--KPYVCG--EENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         2 ~l~~H~~--~h~~~--~p~~C~--~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      .|..|.+  .|+++  +++.|.  .  |++.|.+...+..|...|.+.+++.|.
T Consensus       304 ~l~~~~~~~~h~~~~~~~~~~p~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~  355 (467)
T COG5048         304 PLTRHLRSVNHSGESLKPFSCPYSL--CGKLFSRNDALKRHILLHTSISPAKEK  355 (467)
T ss_pred             cccccccccccccccCCceeeeccC--CCccccccccccCCcccccCCCccccc
Confidence            4677888  89999  999999  6  999999999999999999988777765

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=90.96  E-value=0.018  Score=32.95  Aligned_cols=19  Identities=0%  Similarity=0.006  Sum_probs=16.1

Q ss_pred             CCCCcCCCCCCcccccccc
Q psy4019          62 LGGASPSRSDDMPLSAKTA   80 (109)
Q Consensus        62 ~C~~~f~~~~~l~~H~~~~   80 (109)
                      .|++.|.....|..|++..
T Consensus        55 ~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen   55 YCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             SSS-EESSHHHHHHHHHHT
T ss_pred             ccCCCCcCHHHHHHHHcCc
Confidence            9999999999999999864

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=90.72  E-value=0.25  Score=21.39  Aligned_cols=21  Identities=33%  Similarity=0.774  Sum_probs=16.3

Q ss_pred             cccccCCCCCcCCChhHHHHHhhh
Q psy4019          16 YVCGEENCTKRYTDPSSLRKHIKT   39 (109)
Q Consensus        16 ~~C~~~~C~k~f~~~~~l~~H~~~   39 (109)
                      ..|..  ||+.| ....|.+|+..
T Consensus         3 ~~C~~--CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    3 VPCPI--CGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             CcCCC--CCCEE-CHHHHHHHHHh
Confidence            46888  99999 56778888753

>smart00451 ZnF_U1 U1-like zinc finger

Probab=90.14  E-value=0.3  Score=22.46  Aligned_cols=23  Identities=30%  Similarity=0.652  Sum_probs=19.9

Q ss_pred             CcccccCCCCCcCCChhHHHHHhhh
Q psy4019          15 PYVCGEENCTKRYTDPSSLRKHIKT   39 (109)
Q Consensus        15 p~~C~~~~C~k~f~~~~~l~~H~~~   39 (109)
                      +|.|..  |+..|.....+..|++.
T Consensus         3 ~~~C~~--C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKL--CNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccc--cCCccCCHHHHHHHHCh
Confidence            588999  99999999999888753

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>KOG2893|consensus

Probab=83.68  E-value=0.76  Score=31.33  Aligned_cols=29  Identities=28%  Similarity=0.646  Sum_probs=22.5

Q ss_pred             CCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019          14 KPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus        14 ~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      +++ |=.  |.+.|-..--|..|++.    |-|+|.
T Consensus        10 kpw-cwy--cnrefddekiliqhqka----khfkch   38 (341)
T KOG2893|consen   10 KPW-CWY--CNREFDDEKILIQHQKA----KHFKCH   38 (341)
T ss_pred             Cce-eee--cccccchhhhhhhhhhh----ccceee
Confidence            454 445  99999999888888764    679999

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=83.17  E-value=0.68  Score=32.84  Aligned_cols=30  Identities=3%  Similarity=-0.091  Sum_probs=25.5

Q ss_pred             CCCcccCCCCCCCCCCCCCCCCCcCCCCCCcccccccccc
Q psy4019          43 EHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASV   82 (109)
Q Consensus        43 ~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~   82 (109)
                      +|||+|++.          .|+|.+.....|+.|+.-.+.
T Consensus       347 ~KpykCpV~----------gC~K~YknqnGLKYH~lhGH~  376 (423)
T COG5189         347 GKPYKCPVE----------GCNKKYKNQNGLKYHMLHGHQ  376 (423)
T ss_pred             CceecCCCC----------Cchhhhccccchhhhhhcccc
Confidence            599999976          799999999999999875553

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=82.66  E-value=1.1  Score=25.37  Aligned_cols=24  Identities=21%  Similarity=0.684  Sum_probs=21.0

Q ss_pred             CcccccCCCCCcCCChhHHHHHhhhh
Q psy4019          15 PYVCGEENCTKRYTDPSSLRKHIKTV   40 (109)
Q Consensus        15 p~~C~~~~C~k~f~~~~~l~~H~~~h   40 (109)
                      .+.|..  |++.|.....|..|++.+
T Consensus        50 ~~~C~~--C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen   50 SFRCPY--CNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             SEEBSS--SS-EESSHHHHHHHHHHT
T ss_pred             CCCCCc--cCCCCcCHHHHHHHHcCc
Confidence            589999  999999999999999864

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	109
2gli_A	155	Five-Finger GliDNA COMPLEX Length = 155		6e-09

>pdb|2GLI|A Chain A, Five-Finger GliDNA COMPLEX Length = 155

Iteration: 1
 Score = 55.8 bits (133), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 25/32 (78%), Positives = 28/32 (87%)
Query: 11  SSQKPYVCGEENCTKRYTDPSSLRKHIKTVHG 42
           S++KPYVC    CTKRYTDPSSLRKH+KTVHG
Sbjct: 124 SNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	109
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	6e-10
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	1e-05
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	2e-06
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	2e-05
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	4e-05
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	6e-05
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	1e-04
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	2e-04
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	2e-04
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	2e-04
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	2e-04
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	4e-04
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	4e-04
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	6e-04
2epa_A	72	Krueppel-like factor 10; transforming growth facto	6e-04
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	6e-04
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	7e-04
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	9e-04

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 51.8 bits (125), Expect = 6e-10
 Identities = 24/29 (82%), Positives = 25/29 (86%)

Query: 14  KPYVCGEENCTKRYTDPSSLRKHIKTVHG 42
           KPYVC    CTKRYTDPSSLRKH+KTVHG
Sbjct: 127 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 40.7 bits (96), Expect = 1e-05
 Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 1/31 (3%)

Query: 14  KPYVCGEENCTKRYTDPSSLRKHIKTVH-GE 43
           KPY+C  E C+K +++ S   KH    H  E
Sbjct: 96  KPYMCEHEGCSKAFSNASDRAKHQNRTHSNE 126

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 41.5 bits (98), Expect = 2e-06
 Identities = 14/33 (42%), Positives = 18/33 (54%)

Query: 14 KPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCY 46
           PY C  E C KR++ PS L++H K   G  C 
Sbjct: 30 LPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCK 62

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 39.4 bits (93), Expect = 2e-05
 Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 1/30 (3%)

Query: 14 KPYVCGEENCTKRYTDPSSLRKHIKTVHGE 43
          +   C  + CTK + D S++RKH+ T HG 
Sbjct: 4  RTIACPHKGCTKMFRDNSAMRKHLHT-HGP 32

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 39.5 bits (93), Expect = 4e-05
 Identities = 8/30 (26%), Positives = 15/30 (50%)

Query: 14  KPYVCGEENCTKRYTDPSSLRKHIKTVHGE 43
           K + C  + C  R+T  ++++KH    H  
Sbjct: 71  KNFTCDSDGCDLRFTTKANMKKHFNRFHNI 100

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 39.1 bits (92), Expect = 6e-05
 Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 2/35 (5%)

Query: 13  QKPYVCGEENCTKRYTDPSSLRKHIKTVH-GEHCY 46
           Q PY C  E C KR++ PS L++H K  H G  C 
Sbjct: 132 QLPYECPHEGCDKRFSLPSRLKRHEKV-HAGYPCK 165

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 36.3 bits (85), Expect = 1e-04
 Identities = 11/30 (36%), Positives = 15/30 (50%), Gaps = 2/30 (6%)

Query: 14 KPYVCGEENCTKRYTDPSSLRKHIKTVHGE 43
          KPY C    C  R+T   +++ HI   H E
Sbjct: 14 KPYECYI--CHARFTQSGTMKMHILQKHTE 41

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 37.1 bits (87), Expect = 2e-04
 Identities = 11/30 (36%), Positives = 16/30 (53%)

Query: 14 KPYVCGEENCTKRYTDPSSLRKHIKTVHGE 43
          +P++C    C KRY   S L+ H +   GE
Sbjct: 5  RPFMCAYPGCNKRYFKLSHLQMHSRKHTGE 34

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 36.4 bits (85), Expect = 2e-04
 Identities = 9/31 (29%), Positives = 14/31 (45%)

Query: 13 QKPYVCGEENCTKRYTDPSSLRKHIKTVHGE 43
          QK + C E  C K +     L++H+K     
Sbjct: 36 QKSFSCPEPACGKSFNFKKHLKEHMKLHSDT 66

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 36.0 bits (84), Expect = 2e-04
 Identities = 6/31 (19%), Positives = 11/31 (35%), Gaps = 1/31 (3%)

Query: 14 KPYVCGEENCTKRYTDPSSLRKHIKTVH-GE 43
              C    C + +++   L  H K  H  +
Sbjct: 6  SGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQ 36

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 37.3 bits (87), Expect = 2e-04
 Identities = 9/26 (34%), Positives = 15/26 (57%)

Query: 14  KPYVCGEENCTKRYTDPSSLRKHIKT 39
           KP+ C  E C +R+ + S  +KH+  
Sbjct: 119 KPFKCEFEGCDRRFANSSDRKKHMHV 144

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 34.6 bits (80), Expect = 4e-04
 Identities = 8/34 (23%), Positives = 14/34 (41%)

Query: 14 KPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYA 47
          KP+ C    C  R++    L +H ++  G     
Sbjct: 11 KPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSG 44

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 35.7 bits (83), Expect = 4e-04
 Identities = 14/36 (38%), Positives = 20/36 (55%)

Query: 8  PLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGE 43
          P L  ++ + C    CTK YT  S L+ H++T  GE
Sbjct: 8  PDLEKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGE 43

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 34.5 bits (80), Expect = 6e-04
 Identities = 9/29 (31%), Positives = 14/29 (48%), Gaps = 2/29 (6%)

Query: 14 KPYVCGEENCTKRYTDPSSLRKHIKTVHG 42
          K Y C    C K +T   ++  H+K +H 
Sbjct: 39 KVYPCPF--CFKEFTRKDNMTAHVKIIHK 65

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 34.7 bits (80), Expect = 6e-04
 Identities = 11/33 (33%), Positives = 16/33 (48%)

Query: 11 SSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGE 43
          S  + ++C    C K Y   S L+ H +T  GE
Sbjct: 13 SRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGE 45

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 34.7 bits (80), Expect = 6e-04
 Identities = 9/30 (30%), Positives = 12/30 (40%), Gaps = 2/30 (6%)

Query: 14 KPYVCGEENCTKRYTDPSSLRKHIKTVHGE 43
            + C  E C KR+  P S+  H    H  
Sbjct: 37 LRFPC--EFCGKRFEKPDSVAAHRSKSHPA 64

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens} Length = 37

 Score = 33.5 bits (77), Expect = 7e-04
 Identities = 11/33 (33%), Positives = 17/33 (51%)

Query: 11 SSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGE 43
            +K ++C  + C K Y   S LR H++   GE
Sbjct: 4  GKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGE 36

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 34.7 bits (81), Expect = 9e-04
 Identities = 11/30 (36%), Positives = 19/30 (63%)

Query: 14 KPYVCGEENCTKRYTDPSSLRKHIKTVHGE 43
          +PY C  E+C +R++   SL +HI+   G+
Sbjct: 3  RPYACPVESCDRRFSQSGSLTRHIRIHTGQ 32

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	109
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.76
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.71
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.68
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.65
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.65
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.63
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.63
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.63
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.62
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.62
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.61
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.6
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.6
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.59
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.59
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.59
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.57
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.57
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.56
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.55
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.55
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.54
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.54
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.54
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.53
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.51
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.5
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.5
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.5
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.49
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.49
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.48
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.48
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.48
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.48
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.47
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.47
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.47
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.47
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.47
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.47
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.47
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.47
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.46
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.46
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.46
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.46
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.46
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.46
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.46
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.46
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.46
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.46
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.46
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.46
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.46
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.45
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.45
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.45
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.45
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.45
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.45
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.45
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.45
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.44
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.44
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.44
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.44
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.44
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.44
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.44
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.44
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.44
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.44
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.44
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.44
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.44
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.43
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.43
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.43
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.43
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.43
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.43
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.43
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.42
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.42
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.42
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.42
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.42
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.42
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.42
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.42
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.42
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.41
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.41
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.41
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.41
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.41
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.41
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.41
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.41
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.41
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.41
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.41
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.4
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.4
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.4
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.4
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.4
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.4
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.4
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.4
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.4
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.4
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.4
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.4
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.4
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.4
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.39
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.39
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.39
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.39
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.39
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.39
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.39
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.39
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.38
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.38
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.38
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.38
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.38
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.37
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.37
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.37
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.37
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.37
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.37
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.36
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.36
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.36
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.35
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.35
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.34
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.34
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.33
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.33
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.33
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.32
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	99.32
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.31
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.31
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.3
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.3
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.3
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.28
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.28
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.27
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.26
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.26
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.25
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.25
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.24
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.24
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	99.23
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.23
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.22
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.16
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.16
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	99.15
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.12
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.11
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.1
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.09
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.05
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.04
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	99.03
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	99.01
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.01
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	98.96
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.96
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.93
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.93
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.93
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.93
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.93
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.92
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.92
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	98.92
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.91
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.91
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.91
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.91
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.9
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.9
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.9
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.9
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.9
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.9
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.9
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.89
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.89
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.89
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.88
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.88
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.88
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.88
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.88
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.88
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.87
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.87
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.87
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.87
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	98.86
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.86
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	98.86
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.86
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.86
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.86
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.85
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.85
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.85
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.85
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.85
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.84
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.84
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.84
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.84
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	98.84
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.84
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.84
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.84
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.84
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.83
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.83
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.83
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	98.83
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.83
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.83
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.83
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.83
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.83
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.82
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	98.82
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	98.82
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.82
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.82
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.82
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	98.81
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.81
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.81
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.81
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.8
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.8
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.8
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.8
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.8
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.8
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.79
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.79
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.79
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.79
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.79
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.78
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.78
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.78
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.78
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	98.78
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.78
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.77
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.77
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.77
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.77
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.77
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.77
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.76
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.76
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.76
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.75
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.75
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.75
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.75
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.75
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.74
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.74
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.74
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	98.74
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.71
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.7
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.69
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	98.68
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.68
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.68
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.68
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.67
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.64
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.63
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	98.63
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.63
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.63
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.62
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.61
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.57
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.56
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	98.54
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.54
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.52
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.49
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.49
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.48
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.48
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.48
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.47
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	98.45
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.45
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	98.41
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.41
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	98.41
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.41
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.41
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.39
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.38
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.38
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.38
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.37
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.36
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.36
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.35
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.34
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.31
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.3
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.26
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	98.26
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.25
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.25
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.24
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.23
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.55
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.55
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.23
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.23
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.23
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.23
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.22
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	98.2
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.18
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.14
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.41
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	98.12
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.12
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.11
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.08
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.36
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.34
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.01
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.23
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	97.98
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	97.97
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	97.97
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	97.94
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.94
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	97.94
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	97.93
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	97.91
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	97.91
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	97.86
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.83
1ard_A	29	Yeast transcription factor ADR1; transcription reg	97.82
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	97.81
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	97.78
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.73
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	97.64
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.02
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	96.76
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.74
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.49
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	95.92
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	95.36
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	90.72
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	90.54
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	87.37
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	86.35
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	85.25

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.76  E-value=1.1e-19  Score=97.08  Aligned_cols=58  Identities=22%  Similarity=0.358  Sum_probs=55.6

Q ss_pred             CCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccC
Q psy4019          12 SQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVS   83 (109)
Q Consensus        12 ~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~   83 (109)
                      .|+||.|..  |+++|.....|..|+++|++++||.|.            .|++.|.+...|..|+++|++.
T Consensus         1 SEKpy~C~~--C~k~F~~~~~L~~H~~~Ht~ekp~~C~------------~C~k~F~~~~~L~~H~~~Htge   58 (60)
T 4gzn_C            1 SERPFFCNF--CGKTYRDASGLSRHRRAHLGYRPRSCP------------ECGKCFRDQSEVNRHLKVHQNK   58 (60)
T ss_dssp             CCCCEECTT--TCCEESSHHHHHHHHHHHHTCCCEECT------------TTCCEESSHHHHHHHGGGGSCC
T ss_pred             CCCCccCCC--CCCEeCCHHHHHHHHHHhCCCcCeECC------------CCCCCcCCHHHHHHHhCccCCC
Confidence            379999999  999999999999999999999999999            9999999999999999999875

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.71  E-value=1.1e-18  Score=101.32  Aligned_cols=77  Identities=10%  Similarity=0.108  Sum_probs=69.7

Q ss_pred             chhhhccccCCCCCcccccCCCCCcCC-ChhHHHHHhhhhcC-CCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccc
Q psy4019           2 KLNLAYPLLSSQKPYVCGEENCTKRYT-DPSSLRKHIKTVHG-EHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKT   79 (109)
Q Consensus         2 ~l~~H~~~h~~~~p~~C~~~~C~k~f~-~~~~l~~H~~~h~~-~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~   79 (109)
                      .+..|+++|+++++|.|..  |++.|. ....|..|+++|.+ +++|.|.            .|++.|.+...|..|+++
T Consensus        11 ~~~~h~~~h~~~~~~~C~~--C~k~f~~~~~~L~~H~~~h~~~~~~~~C~------------~C~k~F~~~~~L~~H~~~   76 (98)
T 2gqj_A           11 PEEQWQRAIHERGEAVCPT--CNVVTRKTLVGLKKHMEVCQKLQDALKCQ------------HCRKQFKSKAGLNYHTMA   76 (98)
T ss_dssp             SCSHHHHTTTTTSCCCCTT--TCCCCSSCSHHHHHHHHHHHHHHHHHSCS------------SSCCCCSCHHHHHHHHHH
T ss_pred             cHHHHHHHhccCCCcCCCC--CCCChhhhHHHHHHHHHHHcCCCCCEECC------------CCCCccCCHHHHHHHHHH
Confidence            3567999999999999999  999999 99999999999998 9999999            999999999999999999


Q ss_pred             cccCCCCCCCCCC
Q psy4019          80 ASVSSPSIKSEVS   92 (109)
Q Consensus        80 ~~~~~p~~~~~~~   92 (109)
                      +++..|......+
T Consensus        77 h~~~kp~~~~~~~   89 (98)
T 2gqj_A           77 EHSAKPSDAEASE   89 (98)
T ss_dssp             HSCSCSSCCCCCC
T ss_pred             HcCCCCCCCCCCc
Confidence            9998886554443

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.68  E-value=2.9e-18  Score=104.92  Aligned_cols=71  Identities=25%  Similarity=0.272  Sum_probs=57.5

Q ss_pred             chhhhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccc
Q psy4019           2 KLNLAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTAS   81 (109)
Q Consensus         2 ~l~~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~   81 (109)
                      .|..|+++|+++++|.|..  |++.|.....|..|+++|++++||.|+            .|++.|.....|..|+++++
T Consensus        37 ~L~~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~------------~C~k~F~~~~~L~~H~~~hh  102 (133)
T 2lt7_A           37 SLRRHFNIHSWEKKYPCRY--CEKVFPLAEYRTKHEIHHTGERRYQCL------------ACGKSFINYQFMSSHIKSVH  102 (133)
T ss_dssp             HHHHHHHHHHCCSCEECSS--SSCEESSHHHHHHHHHHHHTCCCEEES------------SSCCEESSHHHHHHHHHHHT
T ss_pred             HHHHHHHHcCCCCCeeCCc--cCeecccccchhhhccccCCCccccCC------------CCCCCcCCHHHHHHHhHHhc
Confidence            4677888888888888887  888888888888888888888888888            88888888888888888887


Q ss_pred             cCCCC
Q psy4019          82 VSSPS   86 (109)
Q Consensus        82 ~~~p~   86 (109)
                      +..|+
T Consensus       103 ~~~p~  107 (133)
T 2lt7_A          103 SQDPS  107 (133)
T ss_dssp             CCCTT
T ss_pred             CCCCC
Confidence            76554

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.65  E-value=3e-17  Score=95.84  Aligned_cols=72  Identities=18%  Similarity=0.295  Sum_probs=67.0

Q ss_pred             chhhhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccc
Q psy4019           2 KLNLAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTAS   81 (109)
Q Consensus         2 ~l~~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~   81 (109)
                      .|..|+++|.++++|.|..  |++.|.....|..|++.|.++++|.|.            .|++.|.....|..|+++|+
T Consensus        32 ~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~------------~C~~~f~~~~~L~~H~~~H~   97 (106)
T 2ee8_A           32 NLLIHERTHTDERPYTCDI--CHKAFRRQDHLRDHRYIHSKEKPFKCQ------------ECGKGFCQSRTLAVHKTLHM   97 (106)
T ss_dssp             HHHHHHHHHCCSCCCBCSS--SCCBCSCHHHHHHHGGGSCCCCTTSCS------------SSCCCCSSHHHHHHHHHHTT
T ss_pred             HHHHHHHHcCCCCCcCCCC--ccchhCCHHHHHHHHHHhCCCCCeECC------------CcCCcccCHHHHHHHHHHhC
Confidence            4788999999999999999  999999999999999999999999999            99999999999999999999


Q ss_pred             cCCCCC
Q psy4019          82 VSSPSI   87 (109)
Q Consensus        82 ~~~p~~   87 (109)
                      +..++.
T Consensus        98 ~~~~~~  103 (106)
T 2ee8_A           98 QTSSPT  103 (106)
T ss_dssp             SCCCCC
T ss_pred             CCCCCc
Confidence            887764

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.65  E-value=4.3e-17  Score=91.69  Aligned_cols=76  Identities=18%  Similarity=0.301  Sum_probs=69.0

Q ss_pred             chhhhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCC----CCcccCCCCCCCCCCCCCCCCCcCCCCCCccccc
Q psy4019           2 KLNLAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGE----HCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSA   77 (109)
Q Consensus         2 ~l~~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~----kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~   77 (109)
                      .|..|+++|+++++|.|..  |++.|.....|..|++.+...    ++|.|.            .|++.|.....|..|+
T Consensus         2 s~~~H~~~H~~~k~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~------------~C~~~f~~~~~L~~H~   67 (86)
T 1x6h_A            2 SSGSSGRTHTGEKPYACSH--CDKTFRQKQLLDMHFKRYHDPNFVPAAFVCS------------KCGKTFTRRNTMARHA   67 (86)
T ss_dssp             TTTCCSTTCCCCCCEECSS--SSCEESSHHHHHHHHHHTTCSSCCCCCEECS------------SSCCEESCHHHHHHHH
T ss_pred             CcccccceecCCCCCcCCC--CCCccCCHHHHHHHHHHhcCCcCCCcceECC------------CCCChhCCHHHHHHHH
Confidence            5788999999999999999  999999999999999877654    799999            9999999999999999


Q ss_pred             cccccCCCCCCCCC
Q psy4019          78 KTASVSSPSIKSEV   91 (109)
Q Consensus        78 ~~~~~~~p~~~~~~   91 (109)
                      +++++..++.+...
T Consensus        68 ~~h~~~~~~~~~~~   81 (86)
T 1x6h_A           68 DNCAGPDGVEGENS   81 (86)
T ss_dssp             HHCCCCCSCCCCCC
T ss_pred             HHccCCCCcccCCC
Confidence            99999888866554

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.63  E-value=4.6e-17  Score=90.25  Aligned_cols=68  Identities=18%  Similarity=0.271  Sum_probs=62.1

Q ss_pred             chhhhccccCCCCCcccccCCCCCcCCChhHHHHHhh-hhcCC-CCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccc
Q psy4019           2 KLNLAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIK-TVHGE-HCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKT   79 (109)
Q Consensus         2 ~l~~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~-~h~~~-kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~   79 (109)
                      .|..|+++|+++++|.|..  |++.|.....|..|++ .|.++ ++|.|.            .|++.|.....|..|+++
T Consensus         2 s~~~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~~h~~~~~~~~C~------------~C~~~f~~~~~L~~H~~~   67 (77)
T 2ct1_A            2 SSGSSGRTHSGEKPYECYI--CHARFTQSGTMKMHILQKHTENVAKFHCP------------HCDTVIARKSDLGVHLRK   67 (77)
T ss_dssp             CCCCCCCCCSCCCSEECTT--TCCEESCHHHHHHHHHHHSSSSCSSEECS------------SSSCEESSHHHHHHHHHH
T ss_pred             CCCccccccCCCCCeECCC--cCchhCCHHHHHHHHHHhcCCCCCccCCC------------CCCCccCCHHHHHHHHHH
Confidence            5778999999999999999  9999999999999997 67764 899999            999999999999999998


Q ss_pred             cccC
Q psy4019          80 ASVS   83 (109)
Q Consensus        80 ~~~~   83 (109)
                      ++..
T Consensus        68 ~H~~   71 (77)
T 2ct1_A           68 QHSY   71 (77)
T ss_dssp             TSCC
T ss_pred             hCCC
Confidence            7653

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.63  E-value=3.5e-17  Score=89.72  Aligned_cols=66  Identities=24%  Similarity=0.345  Sum_probs=61.8

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSS   84 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~   84 (109)
                      .+.++|+++++|.|..  |++.|.....|..|+++|.++++|.|.            .|++.|.....|..|+++|++..
T Consensus         4 ~~~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~h~~~~~~~C~------------~C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A            4 GSSGIHSGEKPYGCVE--CGKAFSRSSILVQHQRVHTGEKPYKCL------------ECGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             CCCCTTTTCCCEECSS--SCCEESSHHHHHHHHHGGGCSCCEECS------------SSCCEESSHHHHHHHHHHHHSSS
T ss_pred             CCCcccCCCCCccCCC--CCCccCCHHHHHHHHHhcCCCCCeECC------------CCCcccCCHHHHHHHHHhcCCCC
Confidence            3578899999999999  999999999999999999999999999            99999999999999999998753

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.63  E-value=8.6e-18  Score=102.78  Aligned_cols=74  Identities=14%  Similarity=0.123  Sum_probs=68.5

Q ss_pred             hhhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccC
Q psy4019           4 NLAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVS   83 (109)
Q Consensus         4 ~~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~   83 (109)
                      ..|.++|+|+++|.|..  |++.|.....|..|+++|+++++|.|.            .|++.|.....|..|+++|++.
T Consensus        11 ~h~~~~h~Gek~y~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~------------~C~k~F~~~~~L~~H~~~H~~~   76 (133)
T 2lt7_A           11 DHYELIVDGRVYYICIV--CKRSYVCLTSLRRHFNIHSWEKKYPCR------------YCEKVFPLAEYRTKHEIHHTGE   76 (133)
T ss_dssp             SEEEEEETTEEEEEETT--TCCEESCHHHHHHHHHHHHCCSCEECS------------SSSCEESSHHHHHHHHHHHHTC
T ss_pred             hhceeecCCCcCeECCC--CCCCcCCHHHHHHHHHHcCCCCCeeCC------------ccCeecccccchhhhccccCCC
Confidence            34567899999999999  999999999999999999999999999            9999999999999999999999


Q ss_pred             CCCCCCCC
Q psy4019          84 SPSIKSEV   91 (109)
Q Consensus        84 ~p~~~~~~   91 (109)
                      .|+.+..-
T Consensus        77 k~~~C~~C   84 (133)
T 2lt7_A           77 RRYQCLAC   84 (133)
T ss_dssp             CCEEESSS
T ss_pred             ccccCCCC
Confidence            99877653

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.62  E-value=9.8e-17  Score=92.01  Aligned_cols=71  Identities=23%  Similarity=0.359  Sum_probs=66.0

Q ss_pred             chhhhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccc
Q psy4019           2 KLNLAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTAS   81 (109)
Q Consensus         2 ~l~~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~   81 (109)
                      .|..|+++|.++++|.|..  |++.|.....|..|++.|.++++|.|.            .|++.|.....|..|+++|+
T Consensus        23 ~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~------------~C~~~f~~~~~l~~H~~~h~   88 (96)
T 2dmd_A           23 KLKTHMRCHTGVKPYKCKT--CDYAAADSSSLNKHLRIHSDERPFKCQ------------ICPYASRNSSQLTVHLRSHT   88 (96)
T ss_dssp             HHHHHGGGCCCCCSEECSS--SCCEESSHHHHHHHHHHSCCCCCEECS------------SSSCEESSHHHHHHHHTTCC
T ss_pred             HHHHHHHhcCCCCCEeCCC--CCCccCCHHHHHHHHHHhCCCCCccCC------------CCCCccCCHHHHHHHHHHhc
Confidence            5788999999999999999  999999999999999999999999999            99999999999999999998


Q ss_pred             cCCCC
Q psy4019          82 VSSPS   86 (109)
Q Consensus        82 ~~~p~   86 (109)
                      +..+.
T Consensus        89 ~~~~p   93 (96)
T 2dmd_A           89 GDSGP   93 (96)
T ss_dssp             SCCCC
T ss_pred             CCCCC
Confidence            76543

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.62  E-value=1.9e-16  Score=87.72  Aligned_cols=69  Identities=25%  Similarity=0.335  Sum_probs=63.8

Q ss_pred             hccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCC
Q psy4019           6 AYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSP   85 (109)
Q Consensus         6 H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p   85 (109)
                      +...+.++++|.|..  |++.|.....|..|+++|+++++|.|.            .|++.|.....|..|+++|++..|
T Consensus         9 ~~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~------------~C~~~f~~~~~L~~H~~~H~~~~p   74 (77)
T 2cot_A            9 SEWQQRERRRYKCDE--CGKSFSHSSDLSKHRRTHTGEKPYKCD------------ECGKAFIQRSHLIGHHRVHTGSGP   74 (77)
T ss_dssp             CCSCCCCSCSSBCSS--SCCBCSCHHHHHHHHTTTCCSCSEECS------------SSCCEESSHHHHHHHGGGSCCCCC
T ss_pred             CcCcCCCCCCEECCC--CCcccCCHHHHHHHHHHcCCCcCeeCC------------CCCCccCCHHHHHHHHHHhCCCCC
Confidence            445678899999999  999999999999999999999999999            999999999999999999999888


Q ss_pred             CCC
Q psy4019          86 SIK   88 (109)
Q Consensus        86 ~~~   88 (109)
                      +.+
T Consensus        75 ~~C   77 (77)
T 2cot_A           75 SSG   77 (77)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            753

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.61  E-value=7.1e-17  Score=93.58  Aligned_cols=67  Identities=12%  Similarity=0.149  Sum_probs=61.7

Q ss_pred             chhhhccccCCCCCcccccCCCCCcC-CChhHHHHHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCcccc-ccc
Q psy4019           2 KLNLAYPLLSSQKPYVCGEENCTKRY-TDPSSLRKHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLS-AKT   79 (109)
Q Consensus         2 ~l~~H~~~h~~~~p~~C~~~~C~k~f-~~~~~l~~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H-~~~   79 (109)
                      .|..|+++|.++++|.|..  |++.| .....|..|+++| ++++|.|.            .|++.|.+...|..| +++
T Consensus        21 ~~~~~~~~~~~~~~~~C~~--C~k~F~~~~~~L~~H~~~h-~~k~~~C~------------~Cgk~F~~~~~L~~H~~~~   85 (96)
T 2ctd_A           21 LEEQWYLEIVDKGSVSCPT--CQAVGRKTIEGLKKHMENC-KQEMFTCH------------HCGKQLRSLAGMKYHVMAN   85 (96)
T ss_dssp             HHHHHHHHHHHTSCEECTT--TCSCEESSHHHHHHHHHHH-CCCCCCCS------------SSCCCCSSHHHHHHHHHHH
T ss_pred             HHHHHHHHhcCCCCcCCCC--CCCCcccCHHHHHHHHHHH-CCCCeECC------------CCCCeeCCHHHHHHHhHHh
Confidence            4567888899999999999  99999 9999999999999 99999999            999999999999999 888


Q ss_pred             cccC
Q psy4019          80 ASVS   83 (109)
Q Consensus        80 ~~~~   83 (109)
                      |+..
T Consensus        86 H~~~   89 (96)
T 2ctd_A           86 HNSL   89 (96)
T ss_dssp             TCCC
T ss_pred             cCCC
Confidence            8754

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.60  E-value=1.8e-15  Score=89.41  Aligned_cols=77  Identities=9%  Similarity=0.086  Sum_probs=68.3

Q ss_pred             CchhhhccccCCCCCcccccCCCCCcCCChhHHHHHhhh--hcCCCCcc-cCCCCCCCCCCCCCCCCCcC--CCCCCccc
Q psy4019           1 MKLNLAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKT--VHGEHCYA-NKKHKGMPSKDKDGLGGASP--SRSDDMPL   75 (109)
Q Consensus         1 ~~l~~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~--h~~~kp~~-C~~~~~~~~~~~~~~C~~~f--~~~~~l~~   75 (109)
                      +.|..|+++|+++++|.|..  |++.|.....|..|++.  |.+++++. |.            .|++.|  .....|..
T Consensus         5 ~~l~~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~------------~C~~~f~f~~~~~l~~   70 (115)
T 2dmi_A            5 SSGKLYGSIFTGASKFRCKD--CSAAYDTLVELTVHMNETGHYRDDNHETDN------------NNPKRWSKPRKRSLLE   70 (115)
T ss_dssp             CCCCCCCCCCCCCCSEEBSS--SSCEESSHHHHHHHHHHTCCCBCSCCCCCC------------CCCSCCSSCCCCCCCC
T ss_pred             hhhhhheeeeCCCCCEECCc--cCchhcCHHHHHHHHHHhCccccCCCccCC------------CCCcccccccHHHHHH
Confidence            36889999999999999999  99999999999999998  77777654 99            899888  88899999


Q ss_pred             cccccccCCCCCCCCC
Q psy4019          76 SAKTASVSSPSIKSEV   91 (109)
Q Consensus        76 H~~~~~~~~p~~~~~~   91 (109)
                      |+++|++..|+.+..-
T Consensus        71 H~~~H~~~~~~~C~~C   86 (115)
T 2dmi_A           71 MEGKEDAQKVLKCMYC   86 (115)
T ss_dssp             CCCSCCCCSSCBCSSS
T ss_pred             HhhccCCCcceECCCC
Confidence            9999999999877653

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.60  E-value=2.1e-16  Score=86.90  Aligned_cols=65  Identities=25%  Similarity=0.445  Sum_probs=60.5

Q ss_pred             cccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCC
Q psy4019           8 PLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPS   86 (109)
Q Consensus         8 ~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~   86 (109)
                      ..+.++++|.|..  |++.|.....|..|++.|.++++|.|.            .|++.|.+...|..|+++|++..|+
T Consensus        10 ~~~~~~~~~~C~~--C~k~f~~~~~l~~H~~~H~~~~~~~C~------------~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           10 HMTHSDKPYKCDR--CQASFRYKGNLASHKTVHTGEKPYRCN------------ICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             -CCCCCCSBCCTT--SSCCBSCHHHHHHHHHHHCCCCSEECT------------TTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             cccCCCCCeECCC--CCceeCCHHHHHHHHHHcCCCCCEECC------------CCCchhCCHHHHHHHHHhcCCCCCC
Confidence            3577889999999  999999999999999999999999999            9999999999999999999988765

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.59  E-value=2.7e-16  Score=97.39  Aligned_cols=75  Identities=19%  Similarity=0.275  Sum_probs=47.5

Q ss_pred             hhhhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccCCCCCCCCCCCCCC--CCCcCCCCCCcccccccc
Q psy4019           3 LNLAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSKDKDGL--GGASPSRSDDMPLSAKTA   80 (109)
Q Consensus         3 l~~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~~~~~~~~~~~~~~--C~~~f~~~~~l~~H~~~~   80 (109)
                      |..|+++|.++++|.|..+.|++.|.....|..|+++|.++++|.|.            .  |++.|.....|..|+++|
T Consensus        78 l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~------------~~~C~k~f~~~~~L~~H~~~H  145 (155)
T 2rpc_A           78 LVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCE------------FEGCDRRFANSSDRKKHMHVH  145 (155)
T ss_dssp             HHHHTHHHHCCCSEECSCTTTCCEESCHHHHHHHHTTTCSSCSBCCS------------STTCCCCBSSHHHHHHSSTTT
T ss_pred             HHHHHHhcCCCCcccCCcCCCCCccCCHHHHHHHHHhhCCCCCccCC------------CCCCCCccCCHHHHHHHHHHh
Confidence            45555566666666664333666666666666666666666666665            4  777777777777777777


Q ss_pred             ccCCCCCCC
Q psy4019          81 SVSSPSIKS   89 (109)
Q Consensus        81 ~~~~p~~~~   89 (109)
                      ++..|+.++
T Consensus       146 ~~~k~~~c~  154 (155)
T 2rpc_A          146 TSDKSGPSS  154 (155)
T ss_dssp             TSCCCSCSC
T ss_pred             cCCCCCCCC
Confidence            777766543

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.59  E-value=7.9e-17  Score=91.32  Aligned_cols=69  Identities=26%  Similarity=0.444  Sum_probs=63.8

Q ss_pred             chhhhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccc
Q psy4019           2 KLNLAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTAS   81 (109)
Q Consensus         2 ~l~~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~   81 (109)
                      .|..|+++|.++++|.|..  |++.|.....|..|++.|.++++|.|.            .|++.|.....|..|+++|+
T Consensus        21 ~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~------------~C~~~f~~~~~l~~H~~~H~   86 (90)
T 1a1h_A           21 SLTRHIRIHTGQKPFQCRI--CMRNFSRSDHLTTHIRTHTGEKPFACD------------ICGRKFARSDERKRHTKIHL   86 (90)
T ss_dssp             HHHHHHHHHHCCCCEECTT--TCCEESCHHHHHHHHHHHHCCCCEECT------------TTCCEESSHHHHHHHHGGGG
T ss_pred             HHHHHHHHhCCCCCccCCC--CCcccCCHHHHHHHHHHcCCCCCccCC------------CCCchhCCHHHHHHHHHHhc
Confidence            4788999999999999999  999999999999999999999999999            99999999999999999998


Q ss_pred             cCC
Q psy4019          82 VSS   84 (109)
Q Consensus        82 ~~~   84 (109)
                      +..
T Consensus        87 ~~k   89 (90)
T 1a1h_A           87 RQK   89 (90)
T ss_dssp             C--
T ss_pred             ccC
Confidence            753

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.59  E-value=2.1e-16  Score=86.01  Aligned_cols=65  Identities=15%  Similarity=0.196  Sum_probs=60.5

Q ss_pred             ccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCC
Q psy4019           9 LLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSI   87 (109)
Q Consensus         9 ~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~   87 (109)
                      .|+++++|.|..  |++.|.....|..|+++|.++++|.|.            .|++.|.....|..|++++++..|..
T Consensus         3 s~~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~------------~C~~~f~~~~~L~~H~~~h~~~~p~p   67 (70)
T 1x5w_A            3 SGSSGHPEKCSE--CSYSCSSKAALRIHERIHCTDRPFKCN------------YCSFDTKQPSNLSKHMKKFHGDMSGP   67 (70)
T ss_dssp             SCCCCCSEECSS--SSCEESSHHHHHHHHGGGCCSCSEECS------------SSSCEESSHHHHHHHHHHHHSSSCCS
T ss_pred             CCCCCCCeECCC--CCcccCCHHHHHHHHHHcCCCCCEeCC------------CCCCccCCHHHHHHHHHHHhCCCCCC
Confidence            478899999999  999999999999999999999999999            99999999999999999999876543

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.57  E-value=8.3e-17  Score=89.68  Aligned_cols=67  Identities=24%  Similarity=0.394  Sum_probs=62.6

Q ss_pred             chhhhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccc
Q psy4019           2 KLNLAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTAS   81 (109)
Q Consensus         2 ~l~~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~   81 (109)
                      .|..|+++|.++++|.|..  |++.|.....|..|++.|.++++|.|.            .|++.|.....|..|+++|+
T Consensus        16 ~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~------------~C~~~f~~~~~l~~H~~~H~   81 (82)
T 2kmk_A           16 TLSTHLLIHSDTRPYPCQY--CGKRFHQKSDMKKHTFIHTGEKPHKCQ------------VCGKAFSQSSNLITHSRKHT   81 (82)
T ss_dssp             HHHHHHHHHHTCCCEECSS--SCCEESSHHHHHHHHHHHHTCCCEECT------------TTSCEESSHHHHHHHHHHHC
T ss_pred             hHHHHHHHcCCCCCeeCCc--CChhhCCHHHHHHHHHHhcCCCCCcCC------------CcchhhCChHHHHHHHHhhC
Confidence            5788999999999999999  999999999999999999999999999            99999999999999999876


Q ss_pred             c
Q psy4019          82 V   82 (109)
Q Consensus        82 ~   82 (109)
                      +
T Consensus        82 g   82 (82)
T 2kmk_A           82 G   82 (82)
T ss_dssp             -
T ss_pred             C
Confidence            3

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.57  E-value=1.8e-15  Score=90.37  Aligned_cols=74  Identities=22%  Similarity=0.317  Sum_probs=52.9

Q ss_pred             chhhhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccc
Q psy4019           2 KLNLAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTAS   81 (109)
Q Consensus         2 ~l~~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~   81 (109)
                      .|..|+++|.++++|.|....|++.|.....|..|+++|.++++|.|...          .|++.|.....|..|+++|+
T Consensus        49 ~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~----------~C~~~f~~~~~L~~H~~~H~  118 (124)
T 1ubd_C           49 KLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFD----------GCNKKFAQSTNLKSHILTHA  118 (124)
T ss_dssp             HHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHHHHHHHHCCCCCCCCST----------TCCCCCSSTTTTHHHHHHHC
T ss_pred             HHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCCCCceECCCC----------CCCCccCCHHHHHHHHHHHc
Confidence            46677777877788888522388888888888888888888788888410          58888888888888888887


Q ss_pred             cCCC
Q psy4019          82 VSSP   85 (109)
Q Consensus        82 ~~~p   85 (109)
                      +..+
T Consensus       119 ~~k~  122 (124)
T 1ubd_C          119 KAKN  122 (124)
T ss_dssp             ----
T ss_pred             cccc
Confidence            7654

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.56  E-value=6.2e-16  Score=85.75  Aligned_cols=65  Identities=12%  Similarity=0.104  Sum_probs=57.5

Q ss_pred             ccCCCCCcccccCCCCCcCCChhHHHHHhhhhcC---CCCcccCCCCCCCCCCCCCCCCCcCCCCCCcccccc-ccccCC
Q psy4019           9 LLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHG---EHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAK-TASVSS   84 (109)
Q Consensus         9 ~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~---~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~-~~~~~~   84 (109)
                      +|+++++|.|..  |++.|.....|..|+++|.+   +++|.|.            .|++.|.....|..|++ .|....
T Consensus         1 ~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~------------~C~k~f~~~~~L~~H~~~~H~~~~   66 (78)
T 2d9h_A            1 GSSGSSGLQCEI--CGFTCRQKASLNWHQRKHAETVAALRFPCE------------FCGKRFEKPDSVAAHRSKSHPALL   66 (78)
T ss_dssp             CCCSCCCEECSS--SCCEESSHHHHHHHHHHHHHHTTTCCEECT------------TTCCEESSHHHHHHHHHHTSTTTS
T ss_pred             CCCCCcCeECCC--CCCeeCCHHHHHHHHHHhhccCCCcccCCC------------CCCchhCCHHHHHHHHHHhCCCCC
Confidence            488999999999  99999999999999999986   8999999            99999999999999994 555554


Q ss_pred             CCC
Q psy4019          85 PSI   87 (109)
Q Consensus        85 p~~   87 (109)
                      +..
T Consensus        67 ~~~   69 (78)
T 2d9h_A           67 LAP   69 (78)
T ss_dssp             SCC
T ss_pred             CCc
Confidence            443

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.55  E-value=8.3e-16  Score=87.30  Aligned_cols=63  Identities=16%  Similarity=0.281  Sum_probs=56.4

Q ss_pred             ccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccc-cccccC
Q psy4019           7 YPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSA-KTASVS   83 (109)
Q Consensus         7 ~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~-~~~~~~   83 (109)
                      +.++...++|.|..  |++.|.....|.+|+++|++++||.|.            .|++.|.+...|..|+ ++|+.+
T Consensus        20 ~~~~~~~~~h~C~~--Cgk~F~~~~~L~~H~~~H~~~k~~~C~------------~C~k~F~~~~~L~~H~~~~H~~E   83 (85)
T 2lv2_A           20 LGLSASAECHLCPV--CGESFASKGAQERHLRLLHAAQVFPCK------------YCPATFYSSPGLTRHINKCHPSE   83 (85)
T ss_dssp             CSSCCCCTTEECTT--SCCEESSHHHHHHHHHTTSCSSSEECT------------TSSCEESSHHHHHHHHHTTCTTC
T ss_pred             CCCCCCCCCEECCC--CCCCcCcHHHHhhhhhhccCCCccCCC------------CCCCEeCCHHHHHHhCcccCcCC
Confidence            34567778999999  999999999999999999999999999            9999999999999997 556543

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.55  E-value=1.1e-16  Score=94.01  Aligned_cols=68  Identities=19%  Similarity=0.315  Sum_probs=59.5

Q ss_pred             chhhhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccc
Q psy4019           2 KLNLAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTAS   81 (109)
Q Consensus         2 ~l~~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~   81 (109)
                      .|..|+++|.++++|.|..  |++.|.....|..|+++|.++++|.|.            .|++.|.....|..|++++.
T Consensus        24 ~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~------------~C~~~f~~~~~l~~H~~~~~   89 (110)
T 2csh_A           24 QRDRHMSMHLGLRPYGCGV--CGKKFKMKHHLVGHMKIHTGIKPYECN------------ICAKRFMWRDSFHRHVTSCT   89 (110)
T ss_dssp             HHHHHHHHHSCCCSEECTT--TSCEESSSHHHHHHHTTTCCCCCEECS------------SSCCEESCHHHHHHHHHHHH
T ss_pred             HHHHHHHHcCCCcCccCCC--CCcccCCHHHHHHHHHHcCCCCCeeCC------------CCcchhcCHHHHHHHHHHcc
Confidence            4778888888889999988  999999999999999999988999998            89999988888999998877


Q ss_pred             cC
Q psy4019          82 VS   83 (109)
Q Consensus        82 ~~   83 (109)
                      ..
T Consensus        90 ~~   91 (110)
T 2csh_A           90 KS   91 (110)
T ss_dssp             HH
T ss_pred             cc
Confidence            54

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.54  E-value=3.6e-16  Score=99.80  Aligned_cols=69  Identities=29%  Similarity=0.448  Sum_probs=42.7

Q ss_pred             hhhhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCcccccccccc
Q psy4019           3 LNLAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASV   82 (109)
Q Consensus         3 l~~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~   82 (109)
                      |..|+++|.++++|.|..  |++.|.....|..|+++|.++++|.|.            .|++.|.....|..|+++|++
T Consensus       121 l~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~~~~~~C~------------~C~~~f~~~~~L~~H~~~H~~  186 (190)
T 2i13_A          121 LRAHQRTHTGEKPYKCPE--CGKSFSREDNLHTHQRTHTGEKPYKCP------------ECGKSFSRRDALNVHQRTHTG  186 (190)
T ss_dssp             HHHHHHHHHCCCCEECTT--TCCEESCHHHHHHHHHHHHCCCCEECT------------TTCCEESSHHHHHHHHTTC--
T ss_pred             HHHHHHHhCCCCCeECCC--CCcccCCHHHHHHHHHhcCCCCCeECC------------CCCCccCCHHHHHHHHHhcCC
Confidence            555666666666666666  666666666666666666666666666            667777666666667666666


Q ss_pred             CCC
Q psy4019          83 SSP   85 (109)
Q Consensus        83 ~~p   85 (109)
                      ..|
T Consensus       187 ~k~  189 (190)
T 2i13_A          187 KKT  189 (190)
T ss_dssp             ---
T ss_pred             CCC
Confidence            554

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.54  E-value=9.6e-16  Score=86.60  Aligned_cols=68  Identities=22%  Similarity=0.393  Sum_probs=61.9

Q ss_pred             chhhhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccc
Q psy4019           2 KLNLAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTAS   81 (109)
Q Consensus         2 ~l~~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~   81 (109)
                      .|..|+++|.++++|.|....|++.|.....|..|++.|.++++|.|.            .|++.|.....|..|+++|.
T Consensus        22 ~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~------------~C~~~f~~~~~l~~H~~~H~   89 (89)
T 2wbs_A           22 HLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQ------------KCDRAFSRSDHLALHMKRHF   89 (89)
T ss_dssp             HHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECS------------SSSCEESSHHHHHHHGGGGC
T ss_pred             HHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCC------------CCCcccCCHHHHHHHHHhhC
Confidence            578899999999999997222999999999999999999999999999            99999999999999998873

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.54  E-value=7.4e-16  Score=88.81  Aligned_cols=68  Identities=26%  Similarity=0.434  Sum_probs=61.0

Q ss_pred             chhhhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccc
Q psy4019           2 KLNLAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTAS   81 (109)
Q Consensus         2 ~l~~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~   81 (109)
                      .|..|+++|.++++|.|....|++.|.....|..|++.|.++++|.|.            .|++.|.....|..|+++|+
T Consensus        32 ~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~------------~C~~~f~~~~~l~~H~~~H~   99 (100)
T 2ebt_A           32 HLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCG------------VCNRSFSRSDHLALHMKRHQ   99 (100)
T ss_dssp             HHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCS------------SSCCBCSSHHHHHHHHHHHC
T ss_pred             HHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECC------------CCcCccCCHHHHHHHHHHhC
Confidence            578899999999999996222999999999999999999999999999            99999999999999998875

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.53  E-value=1.7e-15  Score=86.64  Aligned_cols=68  Identities=26%  Similarity=0.379  Sum_probs=62.0

Q ss_pred             chhhhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCC--CCcccCCCCCCCCCCCCCCCCCcCCCCCCcccccc-
Q psy4019           2 KLNLAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGE--HCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAK-   78 (109)
Q Consensus         2 ~l~~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~--kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~-   78 (109)
                      .|..|+++|.++++|.|..  |++.|.....|..|++.|.++  ++|.|.            .|++.|.....|..|++ 
T Consensus        22 ~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~~~C~------------~C~~~f~~~~~L~~H~~~   87 (95)
T 2yt9_A           22 HLNRHKLSHSGEKPYSCPV--CGLRFKRKDRMSYHVRSHDGSVGKPYICQ------------SCGKGFSRPDHLNGHIKQ   87 (95)
T ss_dssp             HHHHHHHHSCSSCSEECSS--SCCEESCHHHHHHHHHHHCCCCCSSBCCS------------SSCCCBSSHHHHHHHHHH
T ss_pred             HHHHHHHhcCCCCCCcCCC--CCCccCCHHHHHHHHHHhcCCCCCceECC------------CccchhCCHHHHHHHHHH
Confidence            4788999999999999999  999999999999999999987  899999            99999999999999986 


Q ss_pred             ccccC
Q psy4019          79 TASVS   83 (109)
Q Consensus        79 ~~~~~   83 (109)
                      .|.+.
T Consensus        88 ~H~~~   92 (95)
T 2yt9_A           88 VHSGP   92 (95)
T ss_dssp             TSCCC
T ss_pred             hcCCC
Confidence            66543

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.51  E-value=6.4e-16  Score=83.08  Aligned_cols=62  Identities=21%  Similarity=0.277  Sum_probs=56.7

Q ss_pred             ccccCCCCCcccccCCCCCcCCChhHHHHHhhh-h-cCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCcccccccccc
Q psy4019           7 YPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKT-V-HGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASV   82 (109)
Q Consensus         7 ~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~-h-~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~   82 (109)
                      +++|+++++|.|..  |++.|.....|..|++. | .++++|.|.            .|++.|.....|..|++++++
T Consensus         2 ~~~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~~H~~~~~~~~C~------------~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            2 EFTKEGEHTYRCKV--CSRVYTHISNFCRHYVTSHKRNVKVYPCP------------FCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             -CEEEETTEEECTT--TCCEESSHHHHHHHHHHHSSSSCCCEECT------------TTCCEESCHHHHHHHHHHHTC
T ss_pred             ccccCCCcceECCC--CcchhCCHHHHHHHHHHHcCCCCcCeECC------------CCCCccCCHHHHHHHHHHHcC
Confidence            46799999999999  99999999999999998 7 689999999            999999999999999988764

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.50  E-value=6.9e-16  Score=91.45  Aligned_cols=73  Identities=23%  Similarity=0.430  Sum_probs=66.0

Q ss_pred             chhhhccccCCCCCcccc--cCCCCCcCCChhHHHHHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccc
Q psy4019           2 KLNLAYPLLSSQKPYVCG--EENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKT   79 (109)
Q Consensus         2 ~l~~H~~~h~~~~p~~C~--~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~   79 (109)
                      .|..|+++|.++++|.|.  .  |++.|.....|..|++.|.++++|.|.            .|++.|.....|..|+++
T Consensus        23 ~l~~H~~~h~~~~~~~C~~~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~------------~C~~~f~~~~~l~~H~~~   88 (119)
T 2jp9_A           23 HLQMHSRKHTGEKPYQCDFKD--CERRFSRSDQLKRHQRRHTGVKPFQCK------------TCQRKFSRSDHLKTHTRT   88 (119)
T ss_dssp             HHHHHHHHHHTTCCEECCSTT--CCCEESSHHHHHHHHHHHHCCCCEECT------------TTCCEESCHHHHHHHHHH
T ss_pred             HHHHHHHhhCCCCCccCCCCC--CcCccCCHHHHHHHHHHcCCCCCccCC------------ccCchhCCHHHHHHHHHH
Confidence            477899999999999998  6  999999999999999999999999999            999999999999999999


Q ss_pred             cccCCCCCC
Q psy4019          80 ASVSSPSIK   88 (109)
Q Consensus        80 ~~~~~p~~~   88 (109)
                      |++..++.+
T Consensus        89 h~~~~~~~C   97 (119)
T 2jp9_A           89 HTGEKPFSC   97 (119)
T ss_dssp             HHTCCCEEC
T ss_pred             hcCCCCeeC
Confidence            998888876

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.50  E-value=1e-15  Score=90.72  Aligned_cols=65  Identities=20%  Similarity=0.389  Sum_probs=61.3

Q ss_pred             chhhhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCccc--CCCCCCCCCCCCCCCCCcCCCCCCccccccc
Q psy4019           2 KLNLAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYAN--KKHKGMPSKDKDGLGGASPSRSDDMPLSAKT   79 (109)
Q Consensus         2 ~l~~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C--~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~   79 (109)
                      .|..|+++|.++++|.|..  |++.|.....|..|+++|.++++|.|  +            .|++.|.....|..|+++
T Consensus        53 ~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~~------------~C~~~f~~~~~L~~H~~~  118 (119)
T 2jp9_A           53 QLKRHQRRHTGVKPFQCKT--CQRKFSRSDHLKTHTRTHTGEKPFSCRWP------------SCQKKFARSDELVRHHNM  118 (119)
T ss_dssp             HHHHHHHHHHCCCCEECTT--TCCEESCHHHHHHHHHHHHTCCCEECCST------------TCCCEESSHHHHHHHHHT
T ss_pred             HHHHHHHHcCCCCCccCCc--cCchhCCHHHHHHHHHHhcCCCCeeCCCC------------CCccccCCHHHHHHHHhc
Confidence            5788999999999999999  99999999999999999999999999  7            899999999999999886


Q ss_pred             c
Q psy4019          80 A   80 (109)
Q Consensus        80 ~   80 (109)
                      |
T Consensus       119 H  119 (119)
T 2jp9_A          119 H  119 (119)
T ss_dssp             C
T ss_pred             C
Confidence            5

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.50  E-value=1.9e-15  Score=78.85  Aligned_cols=56  Identities=16%  Similarity=0.288  Sum_probs=49.8

Q ss_pred             CCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccc
Q psy4019          12 SQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTAS   81 (109)
Q Consensus        12 ~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~   81 (109)
                      |+++|.|..  |++.|.....|..|+++|+++++|.|.            .|++.|.....|..|+++++
T Consensus         1 g~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~------------~C~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C            1 GSSSRECSY--CGKFFRSNYYLNIHLRTHTGEKPYKCE------------FCEYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             ----CBCTT--TCCBCSCHHHHHHHHHHHHCCCCEECS------------SSSCEESSHHHHHHHHHHHC
T ss_pred             CCCCccCCC--CcchhCChHHHHHHHHHcCCCCCcCCC------------CCcchhCCHHHHHHHHHHhc
Confidence            468999999  999999999999999999999999999            99999999999999998765

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.49  E-value=3.7e-15  Score=87.30  Aligned_cols=68  Identities=15%  Similarity=0.056  Sum_probs=62.2

Q ss_pred             ccCCCCCcccccCCCCCcCCChhHHHHHhh-hh---cCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCcccc-ccccccC
Q psy4019           9 LLSSQKPYVCGEENCTKRYTDPSSLRKHIK-TV---HGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLS-AKTASVS   83 (109)
Q Consensus         9 ~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~-~h---~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H-~~~~~~~   83 (109)
                      .-+|++||.|..  |++.|.....|..|++ .|   .+++||.|.            .|++.|.....|..| +++|++.
T Consensus        12 ~~~gekpy~C~~--Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~------------~Cgk~F~~~~~L~~H~~r~Htge   77 (102)
T 2ghf_A           12 NKKVEGGYECKY--CTFQTPDLNMFTFHVDSEHPNVVLNSSYVCV------------ECNFLTKRYDALSEHNLKYHPGE   77 (102)
T ss_dssp             CCCCCSSEECSS--CSCEESCHHHHHHHHHHHCSSCCCSCCEEET------------TTTEEESSTHHHHTHHHHTSTTC
T ss_pred             cCCCCcCcCCCC--CCCccCCHHHHHHHHHhhCCCCCCCCCcCCC------------CCCcccCCHHHHHHHHHHhcCCC
Confidence            457899999999  9999999999999998 58   568999999            999999999999999 8999999


Q ss_pred             CCCCCCC
Q psy4019          84 SPSIKSE   90 (109)
Q Consensus        84 ~p~~~~~   90 (109)
                      .||.+..
T Consensus        78 kpy~C~~   84 (102)
T 2ghf_A           78 ENFKLTM   84 (102)
T ss_dssp             CCEEEEE
T ss_pred             CCeeCCc
Confidence            9997765

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.49  E-value=1.5e-15  Score=88.89  Aligned_cols=71  Identities=13%  Similarity=0.005  Sum_probs=52.2

Q ss_pred             hhhhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCcccccc-ccc
Q psy4019           3 LNLAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAK-TAS   81 (109)
Q Consensus         3 l~~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~-~~~   81 (109)
                      |..|+++|  .++|.|..  |++.|.....|..|++ |+++++|.|.            .|++.|.....|..|++ +|.
T Consensus        32 l~~H~~~H--~~~~~C~~--C~~~f~~~~~l~~H~~-H~~~~~~~C~------------~C~~~f~~~~~L~~H~~~~H~   94 (107)
T 1wjp_A           32 QGSHERLC--RNAAVCPY--CSLRFFSPELKQEHES-KCEYKKLTCL------------ECMRTFKSSFSIWRHQVEVHN   94 (107)
T ss_dssp             HHHHHHHH--HHSBCCTT--TCCCBSSHHHHHHHHH-HCSTGGGEEG------------GGTEECSSHHHHHHHHHHTSC
T ss_pred             HHHHHHHC--CCCccCCC--CCCccCCHHHHHHHHH-cCCCCCccCc------------cccchhCCHHHHHHHHHHHcC
Confidence            55566665  25666766  7777777777777764 7777777777            89999998899999997 888


Q ss_pred             cCCCCCCCC
Q psy4019          82 VSSPSIKSE   90 (109)
Q Consensus        82 ~~~p~~~~~   90 (109)
                      ...++..+.
T Consensus        95 ~~~~~~~~~  103 (107)
T 1wjp_A           95 QNNMAPTSG  103 (107)
T ss_dssp             CCCCCCCCC
T ss_pred             CCCCCCCCC
Confidence            877775543

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.48  E-value=1.3e-14  Score=89.54  Aligned_cols=77  Identities=23%  Similarity=0.336  Sum_probs=62.4

Q ss_pred             chhhhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccCCCCCCCCCCCCCC--CCCcCCCCCCccccc-c
Q psy4019           2 KLNLAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSKDKDGL--GGASPSRSDDMPLSA-K   78 (109)
Q Consensus         2 ~l~~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~~~~~~~~~~~~~~--C~~~f~~~~~l~~H~-~   78 (109)
                      .|..|+++|.++++|.|..+.|++.|.....|..|++.|.++++|.|.            .  |++.|.....|..|+ +
T Consensus        54 ~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~------------~~~C~~~f~~~~~L~~H~~~  121 (155)
T 2gli_A           54 MLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCE------------HEGCSKAFSNASDRAKHQNR  121 (155)
T ss_dssp             HHHHHTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECC------------STTCCCEESSSSTTHHHHHH
T ss_pred             HHHHHHHhcCCCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCC------------CCCCCCccCCHHHHHHHHHH
Confidence            467788888888888886323888888888888888888888888888            6  999999999999998 7


Q ss_pred             ccccCCCCCCCC
Q psy4019          79 TASVSSPSIKSE   90 (109)
Q Consensus        79 ~~~~~~p~~~~~   90 (109)
                      +|++..++.+..
T Consensus       122 ~H~~~~~~~C~~  133 (155)
T 2gli_A          122 THSNEKPYVCKL  133 (155)
T ss_dssp             TTCSCCCEECCS
T ss_pred             hcCCCCCeeCCC
Confidence            888888887654

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.48  E-value=5.1e-14  Score=70.50  Aligned_cols=43  Identities=26%  Similarity=0.452  Sum_probs=41.8

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      +|+++|+++++|.|..  |++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emk_A            2 SSGSSGTGEKPYECKE--CGKAFSQTTHLIQHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSSCSCBCSS--SCCBCSCHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCccCCCCceECCC--CCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            6899999999999999  999999999999999999999999998

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.48  E-value=5.4e-14  Score=70.34  Aligned_cols=43  Identities=26%  Similarity=0.331  Sum_probs=41.7

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      +|+++|+++++|.|..  |++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRE--CDMCFSQASSLRLHQNVHVGEKPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCCCCCSS--SCCCCSSHHHHHHHGGGGSSSSCSCSS
T ss_pred             CCcCccCCCcCeECCC--CCcccCCHHHHHHHHHHcCCCCCcCCC
Confidence            5899999999999999  999999999999999999999999998

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=5.1e-14  Score=70.44  Aligned_cols=43  Identities=30%  Similarity=0.444  Sum_probs=41.7

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      .|+++|+++++|.|..  |++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNE--CGKVFTQNSHLARHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSCCSSCBCTT--TCCBCSSHHHHHHHGGGTSCCCCCSCC
T ss_pred             CCCcCCCCCcCeECCC--CCCeeCCHHHHHHHhhhcCCCCCCCCC
Confidence            5899999999999999  999999999999999999999999998

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.47  E-value=1.7e-15  Score=82.52  Aligned_cols=68  Identities=10%  Similarity=0.067  Sum_probs=61.7

Q ss_pred             CchhhhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCcccccccc
Q psy4019           1 MKLNLAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTA   80 (109)
Q Consensus         1 ~~l~~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~   80 (109)
                      +.|..|+++|.++++|.|..  |++.|.....|..       +++|.|.            .|++.|.....|..|+++|
T Consensus         4 ~~l~~H~~~h~~~~~~~C~~--C~k~f~~~~~l~~-------~~~~~C~------------~C~~~f~~~~~l~~H~~~H   62 (73)
T 2ctu_A            4 GSSGKRQKIHLGDRSQKCSK--CGIIFIRRSTLSR-------RKTPMCE------------KCRKDSCQEAALNKDEGNE   62 (73)
T ss_dssp             CSCCCCCCCCCCCSEEECSS--SCCEEECCCCCCC-------SSSCCCH------------HHHHTCSCCCSSCCCSSCC
T ss_pred             hhHHHHHHHhCCCCCeeCCc--ccchhCCHHHhCc-------CCCCCCC------------CCChhhcCHHHHHHHHHhh
Confidence            36788999999999999999  9999998888765       7899999            9999999999999999999


Q ss_pred             ccCCCCCCC
Q psy4019          81 SVSSPSIKS   89 (109)
Q Consensus        81 ~~~~p~~~~   89 (109)
                      ++..|+.+.
T Consensus        63 ~~~~~~~C~   71 (73)
T 2ctu_A           63 SGKKTSGPS   71 (73)
T ss_dssp             CCCCCSSCC
T ss_pred             cCCCCCCCC
Confidence            999888764

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.47  E-value=5.7e-15  Score=88.18  Aligned_cols=75  Identities=17%  Similarity=0.245  Sum_probs=68.6

Q ss_pred             chhhhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccc
Q psy4019           2 KLNLAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTAS   81 (109)
Q Consensus         2 ~l~~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~   81 (109)
                      .|..|+++| ++++|.|..  |++.|.....|..|++.|.++++|.|...          .|++.|.....|..|+++|+
T Consensus        22 ~l~~H~~~h-~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~~----------~C~~~f~~~~~l~~H~~~h~   88 (124)
T 1ubd_C           22 AMRKHLHTH-GPRVHVCAE--CGKAFVESSKLKRHQLVHTGEKPFQCTFE----------GCGKRFSLDFNLRTHVRIHT   88 (124)
T ss_dssp             HHHHHHGGG-SCCCEECTT--TCCEESSHHHHHHHGGGTSCCCCEECCST----------TCCCEESCHHHHHHHHHHHH
T ss_pred             HHHHHHHHc-CCCCeECCC--CCchhCCHHHHHHHHHHcCCCCCeeCCCC----------CCcCccCCHHHHHHHHHHhC
Confidence            578899999 889999999  99999999999999999999999999711          39999999999999999999


Q ss_pred             cCCCCCCC
Q psy4019          82 VSSPSIKS   89 (109)
Q Consensus        82 ~~~p~~~~   89 (109)
                      +..++.+.
T Consensus        89 ~~~~~~C~   96 (124)
T 1ubd_C           89 GDRPYVCP   96 (124)
T ss_dssp             CCCCCCCC
T ss_pred             CCCceECC
Confidence            99999885

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.47  E-value=6.7e-15  Score=80.47  Aligned_cols=62  Identities=24%  Similarity=0.535  Sum_probs=56.2

Q ss_pred             cccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccc
Q psy4019           8 PLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTAS   81 (109)
Q Consensus         8 ~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~   81 (109)
                      .+|.++++|.|.+..|++.|.....|..|+++|.++++|.|.            .|++.|.....|..|+++|+
T Consensus        12 ~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~------------~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           12 YVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCR------------ICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             CCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECT------------TTCCEESCHHHHHHHHTTCC
T ss_pred             ccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECC------------CCCchhCCHHHHHHHHHhcC
Confidence            468899999997222999999999999999999999999999            99999999999999998874

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=5.5e-14  Score=70.27  Aligned_cols=43  Identities=26%  Similarity=0.362  Sum_probs=41.7

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      .|+++|+++++|.|..  |++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKE--CGKSFSRAPCLLKHERLHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCSSCCCCCCBTT--TTBCCSCHHHHHHHHHHCCSSSCCCCC
T ss_pred             CCcccCCCCCCeECCC--CCCccCchHHHHHHHHhcCCCCCCCCC
Confidence            5899999999999999  999999999999999999999999998

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=3.9e-14  Score=70.95  Aligned_cols=43  Identities=28%  Similarity=0.432  Sum_probs=41.8

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      .|+++|+++++|.|..  |++.|.....|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNE--CGKNFGRHSHLIEHLKRHFREKSSGPS   44 (46)
T ss_dssp             CCCCCCSCCCCEECSS--SCCEESSHHHHHHHHHHHHSTTSSCCS
T ss_pred             CCCCCCCCCCCEEccc--cCcccCCHHHHHHHHHHHcCCCCCCCC
Confidence            6899999999999999  999999999999999999999999998

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=8.2e-14  Score=69.60  Aligned_cols=43  Identities=33%  Similarity=0.463  Sum_probs=41.7

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      +|+++|+++++|.|..  |++.|.....|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSD--CGKSFTWKSRLRIHQKCHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCSSCCSCBCSS--SCCBCSSHHHHHHHHHHHSCCSSCCSC
T ss_pred             CCCCCCCCCCCccCCc--cChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            5899999999999999  999999999999999999999999998

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=6.9e-14  Score=69.94  Aligned_cols=43  Identities=21%  Similarity=0.325  Sum_probs=41.7

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      .|+++|+++++|.|..  |++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDI--CGKSFCGRSRLNRHSMVHTAEKPSGPS   44 (46)
T ss_dssp             CCCCCSSSSCSCCCSS--SCCCCSSHHHHHHHHHHTTCCCSSSCC
T ss_pred             CCCCCCCCCCCcCCCc--CCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            5899999999999999  999999999999999999999999998

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=5.1e-14  Score=70.43  Aligned_cols=43  Identities=23%  Similarity=0.388  Sum_probs=41.8

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      +|+++|+++++|.|..  |++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eml_A            2 SSGSSGTGEKPYECSV--CGKAFSHRQSLSVHQRIHSGKKPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCSEECSS--SCCEESSHHHHHHHHGGGSSCCCSCSS
T ss_pred             CccCCcCCCCCeeCCC--cCCccCCHHHHHHHHHHhcCCCCCCCC
Confidence            5899999999999999  999999999999999999999999998

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.46  E-value=1.1e-14  Score=77.74  Aligned_cols=58  Identities=7%  Similarity=0.092  Sum_probs=51.8

Q ss_pred             hhhhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccc
Q psy4019           3 LNLAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSA   77 (109)
Q Consensus         3 l~~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~   77 (109)
                      |..|+++|++++||.|..  |++.|.....|.   ++|++++||.|.            .|++.|....++..+.
T Consensus         2 L~~h~~~H~~~k~~~C~~--C~k~F~~~~~l~---~~H~~~k~~~C~------------~C~k~f~~~~~~~~~~   59 (62)
T 1vd4_A            2 IETDERDSTNRASFKCPV--CSSTFTDLEANQ---LFDPMTGTFRCT------------FCHTEVEEDESAMPKK   59 (62)
T ss_dssp             CCCCSSSCCSSSEEECSS--SCCEEEHHHHHH---HEETTTTEEBCS------------SSCCBCEECTTCSCCC
T ss_pred             hhhHHHHcCCCCCccCCC--CCchhccHHHhH---hhcCCCCCEECC------------CCCCccccCccccccc
Confidence            678999999999999999  999999888876   789999999999            9999998888776544

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=6.5e-14  Score=70.00  Aligned_cols=43  Identities=26%  Similarity=0.313  Sum_probs=41.7

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      +|+++|+++++|.|..  |++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eop_A            2 SSGSSGTGEKPHECRE--CGKSFSFNSQLIVHQRIHTGENPSGPS   44 (46)
T ss_dssp             CCCCSCCCCCSCBCTT--TCCBCSSHHHHHHHHTTTTTSCCSCCC
T ss_pred             CCccccCCCCCeeCCC--CCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            5899999999999999  999999999999999999999999998

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=5.5e-14  Score=70.27  Aligned_cols=43  Identities=21%  Similarity=0.366  Sum_probs=41.7

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      .|+++|+++++|.|..  |++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emm_A            2 SSGSSGTGERPHKCNE--CGKSFIQSAHLIQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCSSCCCSEECSS--SCCEESSHHHHHHHHHHHSCCCTTSSS
T ss_pred             CCcCCcCCCCCeeCCC--CChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            5899999999999999  999999999999999999999999998

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=9.2e-14  Score=69.53  Aligned_cols=43  Identities=28%  Similarity=0.424  Sum_probs=41.5

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      .|+++|+++++|.|..  |++.|.....|..|+++|++++||.|.
T Consensus         2 ~h~~~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2elz_A            2 SSGSSGSVEKPYKCED--CGKGYNRRLNLDMHQRVHMGEKTSGPS   44 (46)
T ss_dssp             CCCSCCCCCSSCBCSS--SCCBCSSHHHHHHHGGGGGSCCCCCSC
T ss_pred             CCCCCCCCCCCeeCcc--cCchhCCHHHHHHHHHhcCCCCCCCCC
Confidence            4889999999999999  999999999999999999999999998

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=4.7e-14  Score=70.56  Aligned_cols=43  Identities=30%  Similarity=0.419  Sum_probs=41.8

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      .|+++|+++++|.|..  |++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAE--CGKAFTIRSNLIKHQKIHTKQKPSGPS   44 (46)
T ss_dssp             CSSCTTSSCCSEECSS--SCCEESSHHHHHHHHHHTSCCCCSSCS
T ss_pred             CcccCCCCCcCeECCC--CChhhCCHHHHHHHHHHcCCCCCCCCC
Confidence            6899999999999999  999999999999999999999999998

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.46  E-value=7.6e-14  Score=69.84  Aligned_cols=43  Identities=28%  Similarity=0.399  Sum_probs=41.6

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      .|+++|+++++|.|..  |++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ely_A            2 SSGSSGTGEKPFKCVE--CGKGFSRRSALNVHHKLHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCSBCCSS--SCCCBSSTTHHHHHHHHHSCCSSCSCC
T ss_pred             CCCCCCCCCCCcccCc--cCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            4899999999999999  999999999999999999999999998

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.46  E-value=4.5e-14  Score=70.59  Aligned_cols=43  Identities=23%  Similarity=0.339  Sum_probs=41.8

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      .|+++|+++++|.|..  |++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQ--CAKTFSLKSQLIVHQRSHTGVKPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSS--SSCEESSHHHHHHHGGGSSSCCCSCCT
T ss_pred             ccccCCCCCCceECCC--CCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            5899999999999999  999999999999999999999999998

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=5e-14  Score=70.46  Aligned_cols=43  Identities=30%  Similarity=0.403  Sum_probs=41.7

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      .|+++|+++++|.|..  |++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNE--CGKAFSVYSSLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCSSCCCSEECSS--SCCEESCHHHHHHHHHHHHCCSCCSCC
T ss_pred             CcccccCCCcCeECCC--CCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            5899999999999999  999999999999999999999999998

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.46  E-value=5.4e-14  Score=70.36  Aligned_cols=43  Identities=28%  Similarity=0.396  Sum_probs=41.7

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      .|+++|+++++|.|..  |++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNE--CGKVFSRNSQLSQHQKIHTGEKPSGPS   44 (46)
T ss_dssp             CSCSSCTTSCCEECSS--SCCEESSHHHHHHHHTGGGCCCCCSSS
T ss_pred             CCccCCCCCcCcCCCC--CcchhCCHHHHHHHHHhcCCCCCCCCC
Confidence            5899999999999999  999999999999999999999999998

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=7.4e-14  Score=69.79  Aligned_cols=43  Identities=28%  Similarity=0.492  Sum_probs=41.7

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      .|+++|+++++|.|..  |++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNE--CGKAFSQTSKLARHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CSSCCCSSCCTTCCTT--TCCCCSSHHHHHHHHTTTTTCSCCCSC
T ss_pred             CCCcCCCCCcCcCCCC--CCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence            5899999999999999  999999999999999999999999998

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=5.4e-14  Score=70.34  Aligned_cols=43  Identities=28%  Similarity=0.410  Sum_probs=41.7

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      .|+++|+++++|.|..  |++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSI--CGKSFTKKSQLHVHQQIHTGEKPSGPS   44 (46)
T ss_dssp             CSSSCSSCCCSEECSS--SCCEESSHHHHHHHHHTTSSCCSCCSC
T ss_pred             CCCCCCCCCcCcCCCC--CCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            5899999999999999  999999999999999999999999998

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=5.1e-14  Score=70.45  Aligned_cols=43  Identities=33%  Similarity=0.500  Sum_probs=41.7

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      .|+++|+++++|.|..  |++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emh_A            2 SSGSSGTGERPYICTV--CGKAFTDRSNLIKHQKIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSCSCCCSEECTT--TCCEESSHHHHHHHHHHHHCSSCSSSC
T ss_pred             CCCCCCCCCCCcCCCC--CCchhCCHHHHHHHHHhcCCCCCCCCC
Confidence            5899999999999999  999999999999999999999999998

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=6e-14  Score=70.13  Aligned_cols=43  Identities=28%  Similarity=0.421  Sum_probs=41.7

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      .|+++|+++++|.|..  |++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNE--CGKVFTQNSHLANHQRIHTGVKPSGPS   44 (46)
T ss_dssp             CCSSCCCCCCSSEETT--TTEECSSHHHHHHHHGGGSCCCSCSSC
T ss_pred             CCCCCCCCCCCeECCC--cChhhCCHHHHHHHHHHcCCCCCCCCC
Confidence            5899999999999999  999999999999999999999999998

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=6.5e-14  Score=70.04  Aligned_cols=43  Identities=33%  Similarity=0.473  Sum_probs=41.7

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      .|+++|+++++|.|..  |++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNE--CGKVFTQNSHLTNHWRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSSSSCSEECSS--SCCEESSHHHHHHHHHHHSSSSCSSCC
T ss_pred             CCcccCCCCCCEeCCc--CCCccCCHHHHHHHHHHHCCCCCCCCC
Confidence            5899999999999999  999999999999999999999999998

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=6.4e-14  Score=70.11  Aligned_cols=43  Identities=28%  Similarity=0.349  Sum_probs=41.6

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      .|+++|+++++|.|..  |++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emf_A            2 SSGSSGTGGKHFECTE--CGKAFTRKSTLSMHQKIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSSSSSCCEECSS--SCCEESCHHHHHHHGGGTSCSSCSCCC
T ss_pred             ccccccCCCCCeECCC--CCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4899999999999999  999999999999999999999999998

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.45  E-value=6.9e-14  Score=69.31  Aligned_cols=42  Identities=26%  Similarity=0.339  Sum_probs=40.8

Q ss_pred             hccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           6 AYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         6 H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      |+++|+++++|.|..  |++.|.....|..|+++|+++++|.|.
T Consensus         1 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (44)
T 2emx_A            1 GSSGSSGEKPFGCSC--CEKAFSSKSYLLVHQQTHAEEKPSGPS   42 (44)
T ss_dssp             CCCCCSSCCCEECSS--SSCEESSHHHHHHHHHHHTSSCSCSCC
T ss_pred             CCCCcCCCcCccCCC--CCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            788999999999999  999999999999999999999999998

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=1e-13  Score=69.33  Aligned_cols=43  Identities=30%  Similarity=0.460  Sum_probs=41.5

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      .|+++|+++++|.|..  |++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytq_A            2 SSGSSGAGEKPYGCSE--CGKAFSSKSYLIIHMRTHSGEKPSGPS   44 (46)
T ss_dssp             CCSSCSSCCCSCBCSS--SCCBCSCHHHHHHHHTTTCCSCSSCCC
T ss_pred             CCCcCcCCCCCcCCCc--cChhhCChHHHHHHHHHhCCCCCCCCC
Confidence            4889999999999999  999999999999999999999999998

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=6.8e-14  Score=69.98  Aligned_cols=43  Identities=26%  Similarity=0.398  Sum_probs=41.7

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      .|+++|+++++|.|..  |++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emy_A            2 SSGSSGTGENPYECHE--CGKAFSRKYQLISHQRTHAGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSCCEECSS--SCCEESSHHHHHHHHHHHTTSCCSCSS
T ss_pred             CCCCCCCCCcCcCCCC--CCcccCcHHHHHHHHHHcCCCCCCCCC
Confidence            5899999999999999  999999999999999999999999998

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=7.5e-14  Score=69.76  Aligned_cols=43  Identities=28%  Similarity=0.411  Sum_probs=41.7

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      .|+++|+++++|.|..  |++.|.....|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDY--CGKAFGLSAELVRHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCTTCCCCSEECSS--SCCEESSHHHHHHHHGGGCCCSCCSSC
T ss_pred             CCCCCCCCCCCeECCC--CChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            5899999999999999  999999999999999999999999998

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=9.3e-14  Score=69.46  Aligned_cols=43  Identities=23%  Similarity=0.402  Sum_probs=41.5

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      .|+++|+++++|.|..  |++.|.....|..|+++|+++++|+|.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2epz_A            2 SSGSSGTGEKPFDCID--CGKAFSDHIGLNQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCCSBCCTT--TCCCBSSHHHHHHHHTTTTTCCCCSSC
T ss_pred             CCCCCcCCCCCeECCC--CCceeCCHHHHHHHHHHhCCCCCCCCC
Confidence            4889999999999999  999999999999999999999999998

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=5.9e-14  Score=70.20  Aligned_cols=43  Identities=28%  Similarity=0.445  Sum_probs=41.7

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      .|+++|+++++|.|..  |++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNE--CGKVFTQNSHLARHRRVHTGGKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCSSEECSS--SCCEESSSHHHHHHTHHHHSCCCSCSC
T ss_pred             CcCcCCCCCCCeECCc--CCchhCCHHHHHHHHHhcCCCCCCCCC
Confidence            5899999999999999  999999999999999999999999998

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.44  E-value=1.8e-14  Score=75.13  Aligned_cols=55  Identities=29%  Similarity=0.442  Sum_probs=52.1

Q ss_pred             CcccccCCCCCcCCChhHHHHHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccC
Q psy4019          15 PYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVS   83 (109)
Q Consensus        15 p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~   83 (109)
                      ||.|..  |++.|.....|..|+++|.++++|.|.            .|++.|.....|..|+++++..
T Consensus         1 p~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~------------~C~~~f~~~~~l~~H~~~h~~~   55 (57)
T 1bbo_A            1 KYICEE--CGIRXKKPSMLKKHIRTHTDVRPYHCT------------YCNFSFKTKGNLTKHMKSKAHS   55 (57)
T ss_dssp             CCBCTT--TCCBCSSHHHHHHHHHHTSSCCCEECS------------SSSCEESSHHHHHHHHHSSSSC
T ss_pred             CCcCCC--CcCcCCCHHHHHHHHHhcCCCCCccCC------------CCCchhcCHHHHHHHHHHhccc
Confidence            689999  999999999999999999999999999            9999999999999999998764

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=6.5e-14  Score=70.05  Aligned_cols=43  Identities=28%  Similarity=0.444  Sum_probs=41.6

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      .|+++|+++++|.|..  |++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNE--CGKVFRHNSYLSRHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCCSSSEECSS--SCCEESSHHHHHHHHTTTCCCCCCSCC
T ss_pred             CcccCCCCCCCeECCC--CCchhCChHHHHHHHhhcCCCCCCCCC
Confidence            5899999999999999  999999999999999999999999998

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=9.1e-14  Score=69.50  Aligned_cols=43  Identities=26%  Similarity=0.400  Sum_probs=41.7

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      .|+++|+++++|.|..  |++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSE--CGKAFHRHTHLNEHRRIHTGYRPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSS--SCCEESSHHHHHHHHHHHTCCCSSCSS
T ss_pred             CCccccCCCcCeECCC--CCCeeCChHHHHHHHHHcCCCCCCCCC
Confidence            5899999999999999  999999999999999999999999998

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.44  E-value=8.9e-14  Score=69.47  Aligned_cols=43  Identities=30%  Similarity=0.417  Sum_probs=41.6

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      .|+++|+++++|.|..  |++.|.....|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKE--CGKSFRWASCLLKHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CSCCSCCCCCSEECSS--SCCEESSHHHHHHHGGGGTSCCCCSTT
T ss_pred             CCCCCCCCCcCeECCc--cccccCChHHHHHHHHHhCCCCCCCCC
Confidence            5899999999999999  999999999999999999999999998

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.44  E-value=9.7e-14  Score=69.39  Aligned_cols=43  Identities=26%  Similarity=0.349  Sum_probs=41.5

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      .|+++|+++++|.|..  |++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em7_A            2 SSGSSGTGEKPYKCEE--CGKGFICRRDLYTHHMVHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSSCCCSEECSS--SCCEESCHHHHHHHGGGGTTCCCSSTT
T ss_pred             CCCCCCCCCcCccCCC--ccchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4889999999999999  999999999999999999999999998

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.44  E-value=6.3e-14  Score=70.14  Aligned_cols=43  Identities=28%  Similarity=0.305  Sum_probs=41.7

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      .|+++|+++++|.|..  |++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHE--CGRGFTLKSHLNQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSCSEECSS--SCCEESSHHHHHHHHTTTSCSCCSSCC
T ss_pred             CCcCCCCCCCCeECCc--CCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            5899999999999999  999999999999999999999999998

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=6.9e-14  Score=69.94  Aligned_cols=43  Identities=28%  Similarity=0.397  Sum_probs=41.6

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      .|+++|+++++|.|..  |++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHE--CGKVFRRNSHLARHQLIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCTTCCCCEECTT--TCCEESSHHHHHHHHTTTCCCCCSCCS
T ss_pred             CCCcCCCCCCCeECCC--CCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            5899999999999999  999999999999999999999999998

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=7.9e-14  Score=69.67  Aligned_cols=43  Identities=23%  Similarity=0.271  Sum_probs=41.7

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      .|+++|+++++|.|..  |++.|.....|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTE--CGKAFCWKSQLIMHQRTHVDDKHSGPS   44 (46)
T ss_dssp             CCCCCCCCCCSEECSS--SCCEESSSHHHHHHHHHCCSCCCSCCC
T ss_pred             cCcccCCCCCCeeCCC--CCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            5899999999999999  999999999999999999999999998

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.44  E-value=1.9e-14  Score=79.60  Aligned_cols=69  Identities=16%  Similarity=0.142  Sum_probs=59.9

Q ss_pred             CCCCCcccccCCCCCcCCChhHHHHHhh-hhcCCCCcccCCCCCCCCCCCCCC--CCCcCCCCCCccccccccccCCCCC
Q psy4019          11 SSQKPYVCGEENCTKRYTDPSSLRKHIK-TVHGEHCYANKKHKGMPSKDKDGL--GGASPSRSDDMPLSAKTASVSSPSI   87 (109)
Q Consensus        11 ~~~~p~~C~~~~C~k~f~~~~~l~~H~~-~h~~~kp~~C~~~~~~~~~~~~~~--C~~~f~~~~~l~~H~~~~~~~~p~~   87 (109)
                      +++++|.|..+.|++.|.....|..|++ .|.++++|.|.            .  |++.|.....|..|+++|++..|+.
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~------------~~~C~k~f~~~~~L~~H~~~H~~~~~~~   70 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCP------------EPACGKSFNFKKHLKEHMKLHSDTRDYI   70 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECS------------CTTTCCEESSHHHHHHHHHHHHTSCCCS
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECC------------CCCCcCccCCHHHHHHHHHHhCCCCCee
Confidence            5678898886669999999999999998 79999999998            7  9999999999999999999988887


Q ss_pred             CCCC
Q psy4019          88 KSEV   91 (109)
Q Consensus        88 ~~~~   91 (109)
                      +..-
T Consensus        71 C~~C   74 (79)
T 2dlk_A           71 CEFS   74 (79)
T ss_dssp             CCSS
T ss_pred             CCCC
Confidence            7653

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.44  E-value=1e-14  Score=86.80  Aligned_cols=75  Identities=19%  Similarity=0.274  Sum_probs=54.5

Q ss_pred             chhhhccccCCCCCcccccCCCCCcCCChhHHHHHhhh---hcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCcccccc
Q psy4019           2 KLNLAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKT---VHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAK   78 (109)
Q Consensus         2 ~l~~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~---h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~   78 (109)
                      .|..|+++|.++++|.|..  |++.|.....|..|++.   +.++++|.|.            .|++.|.....|..|++
T Consensus        22 ~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~------------~C~~~f~~~~~l~~H~~   87 (124)
T 2dlq_A           22 YLKVHNRKHTGEKPFECPK--CGKCYFRKENLLEHEARNCMNRSEQVFTCS------------VCQETFRRRMELRLHMV   87 (124)
T ss_dssp             HHHHHHHHHSSCCSCBCTT--TCCBCSSHHHHHHHHHHCCCCSCCCCEECS------------SSCCEESSHHHHHHHHH
T ss_pred             HHHHHHHhCCCCCCeECCC--CCchhcCHHHHHHHHhhhhcCCCCCCeECC------------CCCCccCCHHHHHHHHH
Confidence            4667777777777777777  77777777777777764   4566777777            77777777777777777


Q ss_pred             ccccCCCCCCCC
Q psy4019          79 TASVSSPSIKSE   90 (109)
Q Consensus        79 ~~~~~~p~~~~~   90 (109)
                      +|++..|+.+..
T Consensus        88 ~h~~~~~~~C~~   99 (124)
T 2dlq_A           88 SHTGEMPYKCSS   99 (124)
T ss_dssp             HHSSSCSEECSS
T ss_pred             HcCCCCCccCCC
Confidence            777777765544

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.44  E-value=7.3e-14  Score=69.80  Aligned_cols=43  Identities=30%  Similarity=0.438  Sum_probs=41.7

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      +|+++|+++++|.|..  |++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDE--CGKNFCYISALRIHQRVHMGEKCSGPS   44 (46)
T ss_dssp             CCCCCCCCCSSEECTT--TCCEESSHHHHHHHHTTTCCSCSSCCS
T ss_pred             CccccCCCCCCeECCC--cCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            5899999999999999  999999999999999999999999998

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.44  E-value=5e-15  Score=94.46  Aligned_cols=75  Identities=31%  Similarity=0.455  Sum_probs=55.0

Q ss_pred             chhhhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccc
Q psy4019           2 KLNLAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTAS   81 (109)
Q Consensus         2 ~l~~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~   81 (109)
                      .|..|+++|.++++|.|..  |++.|.....|..|++.|.++++|.|.            .|++.|.....|..|+++|+
T Consensus        92 ~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~------------~C~~~f~~~~~L~~H~~~H~  157 (190)
T 2i13_A           92 NLRAHQRTHTGEKPYACPE--CGKSFSQLAHLRAHQRTHTGEKPYKCP------------ECGKSFSREDNLHTHQRTHT  157 (190)
T ss_dssp             HHHHHHHHHHTCCCEECTT--TCCEESSHHHHHHHHHHHHCCCCEECT------------TTCCEESCHHHHHHHHHHHH
T ss_pred             HHHHHHHhcCCCCCCcCCC--CCCccCCHHHHHHHHHHhCCCCCeECC------------CCCcccCCHHHHHHHHHhcC
Confidence            3566666777777777777  777777777777777777777777777            78888877778888888887


Q ss_pred             cCCCCCCCC
Q psy4019          82 VSSPSIKSE   90 (109)
Q Consensus        82 ~~~p~~~~~   90 (109)
                      +..++.+..
T Consensus       158 ~~~~~~C~~  166 (190)
T 2i13_A          158 GEKPYKCPE  166 (190)
T ss_dssp             CCCCEECTT
T ss_pred             CCCCeECCC
Confidence            777776654

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=8e-14  Score=69.71  Aligned_cols=43  Identities=35%  Similarity=0.489  Sum_probs=41.7

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      +|+++|+++++|.|..  |++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAE--CGKAFTDRSNLFTHQKIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSSSCCCSEECSS--SCCEESSHHHHHHHHTTTTTSCCCCTT
T ss_pred             CCCCCCCCCCCeECCC--CCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            5899999999999999  999999999999999999999999998

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=1.3e-13  Score=68.98  Aligned_cols=43  Identities=28%  Similarity=0.410  Sum_probs=41.4

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      .|+++|+++++|.|..  |++.|.....|..|+++|++++||.|.
T Consensus         2 ~h~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ytm_A            2 SSGSSGTGEKPYKCME--CGKAFGDNSSCTQHQRLHTGQRPSGPS   44 (46)
T ss_dssp             CSCCCCSSCCSSSBTT--TTBCCSSHHHHHHHHHHHHSCCCCCCC
T ss_pred             CCCcCCCCCCCcCCCC--CCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            4889999999999999  999999999999999999999999998

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=7e-14  Score=69.92  Aligned_cols=43  Identities=33%  Similarity=0.502  Sum_probs=41.7

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      .|+++|+++++|.|..  |++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEE--CGKRFTQNSQLHSHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CSTTCCCCCCSEEETT--TTEEESSHHHHHHHGGGGSCCCCSCCC
T ss_pred             CcccCCCCCCCeeCCC--CCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            5899999999999999  999999999999999999999999998

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.43  E-value=1.2e-13  Score=69.14  Aligned_cols=43  Identities=19%  Similarity=0.289  Sum_probs=41.5

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      .|+++|+++++|.|..  |++.|.....|..|+++|++++||.|.
T Consensus         2 ~h~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2el6_A            2 SSGSSGAGVNPYKCSQ--CEKSFSGKLRLLVHQRMHTREKPSGPS   44 (46)
T ss_dssp             CSCCSSCCCCSEECSS--SSCEESSHHHHHHHHGGGCCSSCCSCC
T ss_pred             CCCCCCCCCCCeECCC--CCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            4789999999999999  999999999999999999999999998

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.43  E-value=1.1e-13  Score=69.13  Aligned_cols=43  Identities=21%  Similarity=0.182  Sum_probs=41.5

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      .|+++|+++++|.|..  |++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yso_A            2 SSGSSGSREKSHQCRE--CGEIFFQYVSLIEHQVLHMGQKNSGPS   44 (46)
T ss_dssp             CCSCCSSCCCCEECTT--TCCEESSHHHHHHHHHHHSCCSCCCTT
T ss_pred             CcccccCCCCCEEccc--cChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            5889999999999999  999999999999999999999999998

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.43  E-value=8.3e-14  Score=76.99  Aligned_cols=55  Identities=25%  Similarity=0.388  Sum_probs=50.6

Q ss_pred             chhhhcc-ccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCC
Q psy4019           2 KLNLAYP-LLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPS   68 (109)
Q Consensus         2 ~l~~H~~-~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~   68 (109)
                      .|..|++ +|+++++|.|..+.|++.|.....|..|+++|+++++|.|.            .|++.|.
T Consensus        24 ~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~------------~C~k~F~   79 (79)
T 2dlk_A           24 YLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE------------FSGPSSG   79 (79)
T ss_dssp             HHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC------------SSSCCCC
T ss_pred             HHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCC------------CCCCCCC
Confidence            5788998 79999999998656999999999999999999999999999            9999883

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=1.7e-13  Score=68.48  Aligned_cols=43  Identities=28%  Similarity=0.477  Sum_probs=41.6

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      .|+++|+++++|.|..  |++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNE--CGKAFSQTSKLARHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSSSSCSSSCCS--SCCCCSSHHHHHHHGGGGCCCCCCCCC
T ss_pred             CcccccCCCCCeECCC--CCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            5899999999999999  999999999999999999999999997

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=2e-13  Score=66.80  Aligned_cols=42  Identities=26%  Similarity=0.438  Sum_probs=40.1

Q ss_pred             hccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           6 AYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         6 H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      |+++|+++++|.|..  |++.|.....|..|+++|+++++|.|.
T Consensus         1 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSGEKPYSCAE--CKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             CCSSSCSCCSCBCTT--TCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CCcCcCCCCCeECCC--CCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            688999999999999  999999999999999999999999984

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.42  E-value=1.4e-13  Score=68.84  Aligned_cols=43  Identities=26%  Similarity=0.369  Sum_probs=41.5

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      .|+++|+++++|.|..  |++.|.....|..|+++|++++||.|.
T Consensus         2 ~h~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2enc_A            2 SSGSSGSGEKPFKCEE--CGKGFYTNSQCYSHQRSHSGEKPSGPS   44 (46)
T ss_dssp             CCSSCCCCCCSEECSS--SCCEESSHHHHHHHHHHSCCSSCCSSC
T ss_pred             CCCCCCCCCCCcCCCC--CCCcCCChHHHHHHHHHhCCCCCCCCC
Confidence            4889999999999999  999999999999999999999999998

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=9.3e-14  Score=69.46  Aligned_cols=43  Identities=33%  Similarity=0.471  Sum_probs=41.7

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      .|+++|+++++|.|..  |++.|.....|..|+++|++++||.|.
T Consensus         2 ~h~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNE--CGKTFSQKSILSAHQRTHTGEKPSGPS   44 (46)
T ss_dssp             CCSCCCCSSCCEEETT--TTEEESSHHHHHHHHHHHSSCCCSSSC
T ss_pred             CCCCccCCCcCeECCC--CCcccCchHHHHHHHHHcCCCCCCCCC
Confidence            5899999999999999  999999999999999999999999998

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=2e-13  Score=68.15  Aligned_cols=43  Identities=26%  Similarity=0.442  Sum_probs=41.6

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      .|+++|+++++|.|..  |++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSD--CGKSFIKKSQLHVHQRIHTGENPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCSSCCSS--SCCCCSSHHHHHHHHGGGSSSCCCSSS
T ss_pred             ccccCCCCCCCcCCCC--CCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            5899999999999999  999999999999999999999999997

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.42  E-value=1.4e-13  Score=67.44  Aligned_cols=42  Identities=29%  Similarity=0.469  Sum_probs=40.2

Q ss_pred             hccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           6 AYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         6 H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      |+++|+++++|.|..  |++.|.....|..|+++|+++++|.|.
T Consensus         1 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSE--CGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSS--SCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCCCCccCCC--cChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            688999999999999  999999999999999999999999994

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=7.8e-14  Score=69.76  Aligned_cols=43  Identities=28%  Similarity=0.498  Sum_probs=41.6

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      .|+++|+++++|.|..  |++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGE--CGKSYNQRVHLTQHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCSEECTT--TCCEESSSHHHHTTGGGGSSCCSSCSC
T ss_pred             CCCCCCCCCCCeECCC--CCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            5899999999999999  999999999999999999999999998

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=1.8e-13  Score=68.42  Aligned_cols=43  Identities=30%  Similarity=0.434  Sum_probs=41.5

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      .|+++|+++++|.|..  |++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNE--CGKVFTQNSHLVRHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCSCBCSS--SCCBCSSHHHHHHHHTTTTTSSCCCCS
T ss_pred             CCCcCCCCCcCeECCC--CCcccCCHHHHHHHHHhhCCCCCCCCC
Confidence            5899999999999999  999999999999999999999999997

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=1.8e-13  Score=68.48  Aligned_cols=43  Identities=33%  Similarity=0.501  Sum_probs=41.6

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      .|+++|+++++|.|..  |++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEE--CGKRFTQNSHLHSHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCCCCSSSBCCSS--SCCCBSSHHHHHHHGGGGTTCCCSSCC
T ss_pred             CcccCCCCCcCCCCCC--CCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            6899999999999999  999999999999999999999999997

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=1.9e-13  Score=68.52  Aligned_cols=43  Identities=28%  Similarity=0.414  Sum_probs=41.5

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhh-hhcCCCCcccC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIK-TVHGEHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~-~h~~~kp~~C~   49 (109)
                      .|+++|+++++|.|..  |++.|.....|..|++ +|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~~H~~~k~~~C~   45 (47)
T 2epx_A            2 SSGSSGTGKKPYECIE--CGKAFIQNTSLIRHWRYYHTGEKPSGPS   45 (47)
T ss_dssp             CCCCCCCCCCSBCCSS--SCCCBSSHHHHHHHHTTTTTTSCSSSCC
T ss_pred             ccccccCCCCCEECCc--cCchhCChHHHHHHhHhhcCCCCCCCCC
Confidence            5899999999999999  9999999999999999 99999999998

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=1.7e-13  Score=67.71  Aligned_cols=43  Identities=33%  Similarity=0.458  Sum_probs=41.1

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      .|+++|+++++|.|..  |++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNE--CGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             CSCCCSSSSSSSCCTT--TCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCCcCCCCCcCeECCC--CCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            5899999999999999  999999999999999999999999995

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=2.4e-13  Score=67.99  Aligned_cols=43  Identities=28%  Similarity=0.464  Sum_probs=41.3

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      .|+++|+++++|.|..  |++.|.....|..|+++|+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            2 SSGSSGSGKKPYECKE--CRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCCSCCCSCSCCCSS--SCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCCCcCCCCCcCCCC--cCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4889999999999999  999999999999999999999999997

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.41  E-value=1.2e-14  Score=89.72  Aligned_cols=69  Identities=26%  Similarity=0.412  Sum_probs=63.2

Q ss_pred             chhhhccccCCCCCcccccCCCCCcCCChhHHHHHh-hhhcCCCCcccCCCCCCCCCCCCCC--CCCcCCCCCCcccccc
Q psy4019           2 KLNLAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHI-KTVHGEHCYANKKHKGMPSKDKDGL--GGASPSRSDDMPLSAK   78 (109)
Q Consensus         2 ~l~~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~-~~h~~~kp~~C~~~~~~~~~~~~~~--C~~~f~~~~~l~~H~~   78 (109)
                      .|..|+++|.++++|.|...+|++.|.....|..|+ +.|.++++|.|.            .  |++.|.....|..|++
T Consensus        84 ~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~------------~~~C~~~f~~~~~L~~H~~  151 (155)
T 2gli_A           84 NLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCK------------LPGCTKRYTDPSSLRKHVK  151 (155)
T ss_dssp             HHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECC------------STTTCCEESSHHHHHHHHH
T ss_pred             HHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCC------------CCCCccccCCHHHHHHHHH
Confidence            578899999999999998545999999999999998 799999999998            7  9999999999999999


Q ss_pred             cccc
Q psy4019          79 TASV   82 (109)
Q Consensus        79 ~~~~   82 (109)
                      ++++
T Consensus       152 ~hhg  155 (155)
T 2gli_A          152 TVHG  155 (155)
T ss_dssp             HSCC
T ss_pred             hhcC
Confidence            8764

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=2e-13  Score=68.24  Aligned_cols=43  Identities=30%  Similarity=0.445  Sum_probs=41.5

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      .|+++|+++++|.|..  |++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNE--CGKVFTQNSHLARHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSCCCTTCCSS--SCCCCSSHHHHHHHHTTTSCSCCSSTT
T ss_pred             CCCcCCCCCcCeECCC--CCcccCChhHHHHHhHhcCCCCCCCCC
Confidence            5899999999999999  999999999999999999999999997

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=1.6e-13  Score=68.57  Aligned_cols=43  Identities=30%  Similarity=0.466  Sum_probs=41.6

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      .|+++|+++++|.|..  |++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em3_A            2 SSGSSGTGEKPYECKV--CSKAFTQKAHLAQHQKTHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCSEECSS--SCCEESSHHHHHHHHHHHCCCCCCCSC
T ss_pred             CCCCCCCCCcCeECCC--CCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            5899999999999999  999999999999999999999999997

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=2.2e-13  Score=68.11  Aligned_cols=43  Identities=23%  Similarity=0.350  Sum_probs=41.5

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      .|+++|+++++|.|..  |++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDV--CGKEFSQSSHLQTHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCCCCCCCCBCSS--SCCBCSSHHHHHHHHTTTSSSCCCCTT
T ss_pred             CCccccCCCCCeECCC--CCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            5899999999999999  999999999999999999999999997

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=1.8e-13  Score=68.46  Aligned_cols=43  Identities=30%  Similarity=0.401  Sum_probs=41.4

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      .|+++|+++++|.|..  |++.|.....|..|+++|+++++|.|.
T Consensus         2 ~h~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em8_A            2 SSGSSGSGEKPYKCVE--CGKGYKRRLDLDFHQRVHTGEKLSGPS   44 (46)
T ss_dssp             CCCCCCCSCCSEECSS--SCCEESSHHHHHHHHHHHHCCCCCCSC
T ss_pred             CCCCCCCCCCCeECcc--cCchhCCHHHHHHHHHHHcCCCCCCCC
Confidence            4789999999999999  999999999999999999999999998

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.41  E-value=1.7e-13  Score=68.54  Aligned_cols=43  Identities=26%  Similarity=0.420  Sum_probs=41.5

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      .|+++|+++++|.|..  |++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emj_A            2 SSGSSGTGEKPFECAE--CGKSFSISSQLATHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCSEECSS--SSCEESSHHHHHHHHHHHTTSCSSSSC
T ss_pred             CCCCCCCCCCCEECCC--CCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            5899999999999999  999999999999999999999999997

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=1.2e-13  Score=69.09  Aligned_cols=43  Identities=28%  Similarity=0.412  Sum_probs=41.5

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      .|+++|+++++|.|..  |++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ysp_A            2 SSGSSGTGEKPYKCEK--CGKGYNSKFNLDMHQKVHTGERPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCSEEETT--TTEEESCHHHHHHHHTTSCSCCSSCCS
T ss_pred             CCCcCCCCCCCeECCC--CCCccCCHHHHHHHHHhhCCCCCCCCC
Confidence            4889999999999999  999999999999999999999999998

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=2.3e-13  Score=68.02  Aligned_cols=43  Identities=26%  Similarity=0.427  Sum_probs=41.5

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      .|+++|+++++|.|..  |++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em2_A            2 SSGSSGSGEKPFKCKE--CGKAFRQNIHLASHLRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSCCCCCSEECSS--SCCEESSHHHHHHHHHHHCCCCSSCSS
T ss_pred             CCCCCCCCCCCEECCc--CCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4889999999999999  999999999999999999999999998

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=1.7e-13  Score=68.38  Aligned_cols=43  Identities=33%  Similarity=0.441  Sum_probs=41.6

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      .|+++|+++++|.|..  |++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNE--CGKAFRARSSLAIHQATHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCCEECTT--SCCEESSHHHHHHHHHHHCCCSCSCTT
T ss_pred             CccCCCCCCCCeeccc--cCChhcCHHHHHHHHHHcCCCCCCCCC
Confidence            5899999999999999  999999999999999999999999997

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=2.8e-13  Score=67.73  Aligned_cols=43  Identities=28%  Similarity=0.397  Sum_probs=41.5

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      .|+++|+++++|.|..  |++.|.....|..|+++|++++||.|+
T Consensus         2 ~h~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNE--CKKTFTQSSSLTVHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCSSCCCBCTT--TCCBCSSHHHHHHHHHHHTSSCCCSCC
T ss_pred             CCCCCCCCCCCEECCc--cCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            5889999999999999  999999999999999999999999997

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=2.2e-13  Score=68.06  Aligned_cols=43  Identities=28%  Similarity=0.415  Sum_probs=41.5

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      .|+++|+++++|.|..  |++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNE--CGKAFRAHSNLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSCCCCCTT--TTCCCSSHHHHHHHHTTTCCSCCSSCC
T ss_pred             CcccccCCCCCeECCc--CChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            5899999999999999  999999999999999999999999997

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=1.6e-13  Score=68.67  Aligned_cols=43  Identities=23%  Similarity=0.362  Sum_probs=41.5

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      .|+++|+++++|.|..  |++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytp_A            2 SSGSSGTGERHYECSE--CGKAFARKSTLIMHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCCEECSS--SCCEESSHHHHHHHHTTTSCCCCCSSC
T ss_pred             CcccCcCCCCCeECCc--CCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            5899999999999999  999999999999999999999999997

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.40  E-value=2e-13  Score=68.29  Aligned_cols=43  Identities=30%  Similarity=0.405  Sum_probs=41.5

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      .|+++|+++++|.|..  |++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em4_A            2 SSGSSGTGQRPYECIE--CGKAFKTKSSLICHRRSHTGEKPSGPS   44 (46)
T ss_dssp             CSCCCCCCSSSEECSS--SCCEESSHHHHHHHHHHHSSSSCCCCC
T ss_pred             CCccccCCCcCcCCCC--CCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence            5899999999999999  999999999999999999999999997

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=2.5e-13  Score=67.85  Aligned_cols=43  Identities=26%  Similarity=0.430  Sum_probs=41.5

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      .|+++|+++++|.|..  |++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2emg_A            2 SSGSSGTGENPFICSE--CGKVFTHKTNLIIHQKIHTGERPSGPS   44 (46)
T ss_dssp             CCCCCCCSCCSCBCTT--TCCBCSSHHHHHHHHTTTSCCCCSCSC
T ss_pred             CCCCCCCCCCCEECCc--cCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            5899999999999999  999999999999999999999999997

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.40  E-value=6.9e-14  Score=86.42  Aligned_cols=75  Identities=17%  Similarity=0.207  Sum_probs=68.1

Q ss_pred             chhhhccc-cCCCCC--------cccccCCCCCcCCChhHHHHHhhhhcCCCCcccCCCCCCCCCCCCCC--CCCcCCCC
Q psy4019           2 KLNLAYPL-LSSQKP--------YVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSKDKDGL--GGASPSRS   70 (109)
Q Consensus         2 ~l~~H~~~-h~~~~p--------~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~~~~~~~~~~~~~~--C~~~f~~~   70 (109)
                      .|..|+++ |.++.+        |.|..  |++.|.....|..|++.|.++++|.|.            .  |++.|...
T Consensus        40 ~L~~H~~~~H~~~~~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~------------~~~C~~~f~~~  105 (155)
T 2rpc_A           40 ELVTHVTMEHVGGPEQNNHVCYWEECPR--EGKSFKAKYKLVNHIRVHTGEKPFPCP------------FPGCGKIFARS  105 (155)
T ss_dssp             HHHHHHHTTTSCCTTCSSCCCCBTTCTT--SSCCCSSHHHHHHHTHHHHCCCSEECS------------CTTTCCEESCH
T ss_pred             HHHHHHHhhcCCCcccCCccccccCCCC--cccccCCHHHHHHHHHhcCCCCcccCC------------cCCCCCccCCH
Confidence            57889887 877665        89999  999999999999999999999999998            7  99999999


Q ss_pred             CCccccccccccCCCCCCCC
Q psy4019          71 DDMPLSAKTASVSSPSIKSE   90 (109)
Q Consensus        71 ~~l~~H~~~~~~~~p~~~~~   90 (109)
                      ..|..|+++|++..++.+..
T Consensus       106 ~~L~~H~~~h~~~~~~~C~~  125 (155)
T 2rpc_A          106 ENLKIHKRTHTGEKPFKCEF  125 (155)
T ss_dssp             HHHHHHHTTTCSSCSBCCSS
T ss_pred             HHHHHHHHhhCCCCCccCCC
Confidence            99999999999999998763

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=1.8e-13  Score=68.42  Aligned_cols=43  Identities=28%  Similarity=0.473  Sum_probs=41.6

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      .|+++|+++++|.|..  |++.|.....|..|+++|+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSD--CGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCEECSS--SCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             CcccccCCCCCEECcc--cCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            5899999999999999  999999999999999999999999997

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.40  E-value=1.9e-13  Score=67.64  Aligned_cols=43  Identities=19%  Similarity=0.249  Sum_probs=41.2

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      .|+++|+++++|.|..  |++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            2 SSGSSGHTRKRYECSK--CQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCCSCCCCCSSEECTT--TCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             CcccccCCCCCeECCC--CCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            5899999999999999  999999999999999999999999995

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=2.1e-13  Score=67.43  Aligned_cols=43  Identities=30%  Similarity=0.468  Sum_probs=41.2

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      .|+++|+++++|.|..  |++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            2 SSGSSGTGEKPYECNE--CQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CCSSCCSCCCSEECTT--TCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CCccCCCCCCCeECCC--CCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            5899999999999999  999999999999999999999999995

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=2e-13  Score=68.13  Aligned_cols=43  Identities=28%  Similarity=0.511  Sum_probs=41.5

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      .|+++|+++++|.|..  |++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~p~~C~   44 (46)
T 2yts_A            2 SSGSSGTGEKPYICNE--CGKSFIQKSHLNRHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCSCCCCSCCSEECSS--SCCEESSHHHHHHHGGGTSSCCSSCCC
T ss_pred             CCCCCCCCCcCEECCC--CChhhCChHHHHHHHHhcCCCCCcCCC
Confidence            5899999999999999  999999999999999999999999997

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=2.2e-13  Score=68.04  Aligned_cols=43  Identities=23%  Similarity=0.386  Sum_probs=41.5

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      .|+++|+++++|.|..  |++.|.....|..|+++|+++++|.|+
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emi_A            2 SSGSSGTGERHYECSE--CGKAFIQKSTLSMHQRIHRGEKPSGPS   44 (46)
T ss_dssp             CCCCSCSSCCCEECSS--SCCEESSHHHHHHHHGGGCSCCCCSCC
T ss_pred             CCCcccCCCCCCCCCC--CCcccCCHHHHHHHHhHhCCCCCCCCC
Confidence            5899999999999999  999999999999999999999999997

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.40  E-value=8.4e-14  Score=81.59  Aligned_cols=68  Identities=21%  Similarity=0.226  Sum_probs=63.6

Q ss_pred             cccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCC
Q psy4019           8 PLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSI   87 (109)
Q Consensus         8 ~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~   87 (109)
                      ..|+++++|.| .  |++.|.....|..|++.|.++++|.|.            .|++.|.....|..|+++|....++.
T Consensus         3 ~~h~~~k~~~C-~--C~~~f~~~~~l~~H~~~h~~~~~~~C~------------~C~~~f~~~~~l~~H~~~h~~~~~~~   67 (110)
T 2csh_A            3 SGSSGDKLYPC-Q--CGKSFTHKSQRDRHMSMHLGLRPYGCG------------VCGKKFKMKHHLVGHMKIHTGIKPYE   67 (110)
T ss_dssp             CCCCCCCCEEC-T--TSCEESSHHHHHHHHHHHSCCCSEECT------------TTSCEESSSHHHHHHHTTTCCCCCEE
T ss_pred             CCCCCCCCEec-c--CCCccCCHHHHHHHHHHcCCCcCccCC------------CCCcccCCHHHHHHHHHHcCCCCCee
Confidence            36899999999 8  999999999999999999999999999            99999999999999999999988887


Q ss_pred             CCC
Q psy4019          88 KSE   90 (109)
Q Consensus        88 ~~~   90 (109)
                      +..
T Consensus        68 C~~   70 (110)
T 2csh_A           68 CNI   70 (110)
T ss_dssp             CSS
T ss_pred             CCC
Confidence            765

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=3.1e-13  Score=67.63  Aligned_cols=43  Identities=26%  Similarity=0.359  Sum_probs=41.2

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      .|+++|+++++|.|..  |++.|.....|..|+++|++++||.|+
T Consensus         2 ~h~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eon_A            2 SSGSSGTGEKPYKCQV--CGKAFRVSSHLVQHHSVHSGERPSGPS   44 (46)
T ss_dssp             CCSSSCSSCCSCBCSS--SCCBCSSHHHHHHHTTTTTSCCSCTTS
T ss_pred             CCCCCCCCCcccCCCC--CCcccCcHHHHHHHHHhcCCCCCCCCC
Confidence            4789999999999999  999999999999999999999999997

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=1.7e-13  Score=68.57  Aligned_cols=43  Identities=21%  Similarity=0.382  Sum_probs=41.5

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      +|+++|+++++|.|..  |++.|.....|..|+++|+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNV--CGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             CSCCCCSSCCSEEETT--TTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             CccccCCCCCCeECcc--cChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            5899999999999999  999999999999999999999999997

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.40  E-value=5.7e-14  Score=73.93  Aligned_cols=55  Identities=25%  Similarity=0.436  Sum_probs=51.0

Q ss_pred             CCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccc-ccccc
Q psy4019          14 KPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSA-KTASV   82 (109)
Q Consensus        14 ~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~-~~~~~   82 (109)
                      +||.|..  |++.|.....|..|+++|+++++|.|.            .|++.|.....|..|+ ++|.+
T Consensus         1 k~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~------------~C~~~f~~~~~l~~H~~~~H~~   56 (60)
T 2adr_A            1 RSFVCEV--CTRAFARQEHLKRHYRSHTNEKPYPCG------------LCNRAFTRRDLLIRHAQKIHSG   56 (60)
T ss_dssp             CCBCCTT--TCCCBSCHHHHHHHHHTTTSSCSEECT------------TTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcCcCCC--CccccCCHHHHHHHHHHhCCCCCccCC------------CCCCccCCHHHHHHHHHHHcCC
Confidence            5899999  999999999999999999999999999            9999999999999996 56664

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=1.7e-13  Score=67.85  Aligned_cols=43  Identities=26%  Similarity=0.400  Sum_probs=41.1

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      .|+++|+++++|.|..  |++.|.....|..|+++|+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            2 SSGSSGTGENPYECCE--CGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             CSCCSSSSCCSCEETT--TTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CCccccCCCcCeeCCC--CCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            5899999999999999  999999999999999999999999995

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.39  E-value=1.5e-14  Score=87.08  Aligned_cols=64  Identities=17%  Similarity=0.207  Sum_probs=58.4

Q ss_pred             hhhhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCcccccccccc
Q psy4019           3 LNLAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASV   82 (109)
Q Consensus         3 l~~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~   82 (109)
                      |..|+ .|++++||.|..  |++.|.....|..|+++|  ++||.|.            .|++.|.+...|..|++++++
T Consensus        63 l~~h~-~h~~~~~~~C~~--C~k~f~~~~~l~~H~~~H--~~~~~C~------------~C~k~f~~~~~l~~H~~~h~~  125 (129)
T 2wbt_A           63 LYRLL-ASKAISQFVCPL--CLMPFSSSVSLKQHIRYT--EHTKVCP------------VCKKEFTSTDSALDHVCKKHN  125 (129)
T ss_dssp             HHHHH-HHHHHCSEECTT--TCCEESSHHHHHHHHHHT--CCCCBCT------------TTCCBCSSHHHHHHHHHHTTC
T ss_pred             HHHHH-HhCCCCCeECCC--CCcccCCHhHHHHHHHHC--CCCCCCC------------CCCcccCCHHHHHHHHHHHCC
Confidence            45565 588899999999  999999999999999999  8999999            999999999999999999886


Q ss_pred             C
Q psy4019          83 S   83 (109)
Q Consensus        83 ~   83 (109)
                      .
T Consensus       126 ~  126 (129)
T 2wbt_A          126 I  126 (129)
T ss_dssp             C
T ss_pred             c
Confidence            4

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=1.7e-13  Score=67.14  Aligned_cols=42  Identities=26%  Similarity=0.446  Sum_probs=40.2

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCccc
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYAN   48 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C   48 (109)
                      .|+++|+++++|.|..  |++.|.....|..|+++|++++||.|
T Consensus         1 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            1 GSSGSSGGEKPYRCDQ--CGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCCSCCSBCCTT--TTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CCccccCCCCCeeCCC--ccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            4889999999999999  99999999999999999999999988

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=2.6e-13  Score=67.86  Aligned_cols=43  Identities=23%  Similarity=0.398  Sum_probs=41.5

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      .|+++|+++++|.|..  |++.|.....|..|+++|+++++|.|+
T Consensus         2 ~h~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            2 SSGSSGSGERPFKCNE--CGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CCCSCSSCCCSCCCSS--SCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCCcCCCCCCCeECCC--CCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            5899999999999999  999999999999999999999999997

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=2.2e-13  Score=68.00  Aligned_cols=43  Identities=28%  Similarity=0.440  Sum_probs=41.5

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      .|+++|+++++|.|..  |++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSE--CQKAFNTKSNLIVHQRTHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCSEECSS--SCCEESSHHHHHHHHHTSCSSSSSCCC
T ss_pred             CCCCCCCCCCCcCCCC--CCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            5899999999999999  999999999999999999999999997

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=2.6e-13  Score=67.76  Aligned_cols=43  Identities=28%  Similarity=0.458  Sum_probs=41.5

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      .|+++|+++++|.|..  |++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~kp~~C~   44 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEE--CGKAFIHDSQLQEHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CSSSSSSCCCSEECTT--TCCEESSHHHHHHHHHHHHSCCCSSST
T ss_pred             CCCcCcCCCcCccCCC--CCCCcCCHHHHHHHHHhcCCCCCCCCC
Confidence            5899999999999999  999999999999999999999999997

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.39  E-value=2.6e-13  Score=67.20  Aligned_cols=43  Identities=16%  Similarity=0.318  Sum_probs=41.0

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      .|+++|++++||.|..  |++.|.....|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSK--CDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CCSCCCSCCCSEECSS--SSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CCccccCCCCCeECCC--CCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            5899999999999999  999999999999999999999999984

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=2.4e-13  Score=67.85  Aligned_cols=43  Identities=28%  Similarity=0.516  Sum_probs=41.5

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      .|+++|+++++|.|..  |++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGE--CGKAFAQKANLTQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCCEECSS--SCCEESSHHHHHHHHTTTSSCCSSCSC
T ss_pred             CCccCCCCCCCeECCC--CCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            5899999999999999  999999999999999999999999997

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.38  E-value=9.5e-14  Score=75.68  Aligned_cols=64  Identities=23%  Similarity=0.313  Sum_probs=55.1

Q ss_pred             ccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCcccccccc
Q psy4019           7 YPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTA   80 (109)
Q Consensus         7 ~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~   80 (109)
                      ...+...++|.|..++|++.|.....|..|+++|+++++|.|...          .|++.|.....|..|+++|
T Consensus         9 ~~~~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~----------~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A            9 QIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWK----------GCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCT----------TCCCEESSHHHHHHHTTTC
T ss_pred             CCCccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCC----------CCCcccCCHHHHHhHhhcC
Confidence            345677789999766699999999999999999999999999610          4999999999999998865

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=2.4e-13  Score=66.58  Aligned_cols=41  Identities=24%  Similarity=0.468  Sum_probs=39.7

Q ss_pred             hccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCccc
Q psy4019           6 AYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYAN   48 (109)
Q Consensus         6 H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C   48 (109)
                      |+++|+++++|.|..  |++.|.....|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCET--CGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTT--TCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCC--cChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            789999999999999  99999999999999999999999998

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.38  E-value=7.4e-14  Score=83.03  Aligned_cols=67  Identities=18%  Similarity=0.235  Sum_probs=60.4

Q ss_pred             chhhhcc---ccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCcccccc
Q psy4019           2 KLNLAYP---LLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAK   78 (109)
Q Consensus         2 ~l~~H~~---~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~   78 (109)
                      .|..|++   .|.++++|.|..  |++.|.....|..|+++|.++++|.|.            .|++.|.....|..|++
T Consensus        50 ~l~~H~~~~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~------------~C~~~f~~~~~l~~H~~  115 (124)
T 2dlq_A           50 NLLEHEARNCMNRSEQVFTCSV--CQETFRRRMELRLHMVSHTGEMPYKCS------------SCSQQFMQKKDLQSHMI  115 (124)
T ss_dssp             HHHHHHHHCCCCSCCCCEECSS--SCCEESSHHHHHHHHHHHSSSCSEECS------------SSCCEESSHHHHHHHHH
T ss_pred             HHHHHHhhhhcCCCCCCeECCC--CCCccCCHHHHHHHHHHcCCCCCccCC------------CccchhCCHHHHHHHHH
Confidence            4677877   468889999999  999999999999999999999999999            99999999999999997


Q ss_pred             c-ccc
Q psy4019          79 T-ASV   82 (109)
Q Consensus        79 ~-~~~   82 (109)
                      . |.+
T Consensus       116 ~~H~~  120 (124)
T 2dlq_A          116 KLHSG  120 (124)
T ss_dssp             HTSSC
T ss_pred             HHCCC
Confidence            4 544

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=4.5e-13  Score=66.94  Aligned_cols=43  Identities=26%  Similarity=0.446  Sum_probs=41.1

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      .|+++|+++++|.|..  |++.|.....|..|+++|++++||.|.
T Consensus         2 ~h~~~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            2 SSGSSGTGEKPYECDV--CRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSSSCBCTT--TCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CCCCCcCCCCCcCCCC--cCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4788999999999999  999999999999999999999999997

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.38  E-value=3.6e-13  Score=66.00  Aligned_cols=41  Identities=22%  Similarity=0.472  Sum_probs=39.7

Q ss_pred             hccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCccc
Q psy4019           6 AYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYAN   48 (109)
Q Consensus         6 H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C   48 (109)
                      |+++|+++++|.|..  |++.|.....|..|+++|++++||+|
T Consensus         2 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEI--CGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSS--SCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCC--CCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            789999999999999  99999999999999999999999998

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.37  E-value=6.1e-13  Score=65.85  Aligned_cols=43  Identities=21%  Similarity=0.221  Sum_probs=40.8

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      .|+++|+++++|.|..  |++.|.....|..|+++|++++||+|+
T Consensus         2 ~h~~~h~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            2 SSGSSGAAKTTSECQE--CGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CCSCSCSSSCCCCCTT--TCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCCCCCcCeECCC--CCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            4788999999999999  999999999999999999999999995

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=2.4e-13  Score=67.92  Aligned_cols=43  Identities=21%  Similarity=0.340  Sum_probs=41.4

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      .|+++|+++++|.|..  |++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKE--CGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSS--SCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccccccCCCCCeeCcc--cChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            5899999999999999  999999999999999999999999997

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=3e-13  Score=67.51  Aligned_cols=43  Identities=26%  Similarity=0.395  Sum_probs=41.5

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      .|+++|+++++|.|..  |++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQ--CGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCSSEETT--TTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             CcccCCCCCCCeECCC--CChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            5899999999999999  999999999999999999999999997

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.37  E-value=4e-13  Score=65.71  Aligned_cols=41  Identities=24%  Similarity=0.494  Sum_probs=39.6

Q ss_pred             hccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCccc
Q psy4019           6 AYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYAN   48 (109)
Q Consensus         6 H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C   48 (109)
                      |+++|+++++|.|..  |++.|.....|..|+++|++++||.|
T Consensus         2 H~~~H~~~~~~~C~~--C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQ--CGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSS--SCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCC--CCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            788999999999999  99999999999999999999999998

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.37  E-value=1.1e-13  Score=88.25  Aligned_cols=28  Identities=7%  Similarity=0.049  Sum_probs=17.2

Q ss_pred             CCCCcCCCCCCccccccccccCCCCCCC
Q psy4019          62 LGGASPSRSDDMPLSAKTASVSSPSIKS   89 (109)
Q Consensus        62 ~C~~~f~~~~~l~~H~~~~~~~~p~~~~   89 (109)
                      .|++.|.....|..|+++|++..|+.+.
T Consensus       111 ~C~k~f~~~~~L~~H~~~H~~~~~~~C~  138 (190)
T 1tf6_A          111 NCGKAFKKHNQLKVHQFSHTQQLPYECP  138 (190)
T ss_dssp             SSCEECSSHHHHHHHHGGGSSSCSSBCC
T ss_pred             CCccccCCHHHHHHHHHHhCCCCCccCC
Confidence            5666666666666666666666666554

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.37  E-value=1.5e-13  Score=87.54  Aligned_cols=67  Identities=15%  Similarity=0.189  Sum_probs=58.8

Q ss_pred             chhhhc-ccc-CCCCCccc--ccCCCCCcCCChhHHHHHhhhhcCCCCcccCCCCCCCCCCCCCC--CCCcCCCCCCccc
Q psy4019           2 KLNLAY-PLL-SSQKPYVC--GEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSKDKDGL--GGASPSRSDDMPL   75 (109)
Q Consensus         2 ~l~~H~-~~h-~~~~p~~C--~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~~~~~~~~~~~~~~--C~~~f~~~~~l~~   75 (109)
                      .|..|+ +.| .++++|.|  ..  |++.|.....|..|+++|+++++|.|.            .  |++.|.....|..
T Consensus        89 ~l~~H~~~~h~~~~~~~~C~~~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~------------~~~C~k~F~~~~~L~~  154 (190)
T 1tf6_A           89 NMKKHFNRFHNIKICVYVCHFEN--CGKAFKKHNQLKVHQFSHTQQLPYECP------------HEGCDKRFSLPSRLKR  154 (190)
T ss_dssp             HHHHHHHTTSSTTTSCCEECSSS--SCEECSSHHHHHHHHGGGSSSCSSBCC------------SSSCCCBCSSHHHHHH
T ss_pred             HHHHHHHHhcCCCcceeeCCCCC--CccccCCHHHHHHHHHHhCCCCCccCC------------CCCCCchhcCHHHHHH
Confidence            467787 677 46788999  77  999999999999999999999999997            6  9999999999999


Q ss_pred             ccccccc
Q psy4019          76 SAKTASV   82 (109)
Q Consensus        76 H~~~~~~   82 (109)
                      |+++|++
T Consensus       155 H~~~H~~  161 (190)
T 1tf6_A          155 HEKVHAG  161 (190)
T ss_dssp             HHTSSCS
T ss_pred             HHHHhCC
Confidence            9999887

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.36  E-value=1.4e-13  Score=78.68  Aligned_cols=68  Identities=19%  Similarity=0.248  Sum_probs=63.1

Q ss_pred             ccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCC
Q psy4019           9 LLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIK   88 (109)
Q Consensus         9 ~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~   88 (109)
                      .+.++++|.|..  |++.|.....|..|++.|.++++|.|.            .|++.|.....|..|+++|+...++.+
T Consensus         2 s~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~------------~C~~~f~~~~~l~~H~~~h~~~~~~~C   67 (96)
T 2dmd_A            2 SSGSSGPHKCEV--CGKCFSRKDKLKTHMRCHTGVKPYKCK------------TCDYAAADSSSLNKHLRIHSDERPFKC   67 (96)
T ss_dssp             CCCCCCCCCBTT--TTBCCCCHHHHHHHGGGCCCCCSEECS------------SSCCEESSHHHHHHHHHHSCCCCCEEC
T ss_pred             CCCCCcCeECCC--CCCccCCHHHHHHHHHhcCCCCCEeCC------------CCCCccCCHHHHHHHHHHhCCCCCccC
Confidence            356789999999  999999999999999999999999999            999999999999999999999888877


Q ss_pred             CC
Q psy4019          89 SE   90 (109)
Q Consensus        89 ~~   90 (109)
                      ..
T Consensus        68 ~~   69 (96)
T 2dmd_A           68 QI   69 (96)
T ss_dssp             SS
T ss_pred             CC
Confidence            65

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.36  E-value=3.4e-14  Score=79.30  Aligned_cols=64  Identities=27%  Similarity=0.355  Sum_probs=46.7

Q ss_pred             chhhhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccCCCCCCCCCCCCCC---CCCcCCCCCCcccccc
Q psy4019           2 KLNLAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSKDKDGL---GGASPSRSDDMPLSAK   78 (109)
Q Consensus         2 ~l~~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~~~~~~~~~~~~~~---C~~~f~~~~~l~~H~~   78 (109)
                      .|..|+++|.++++|.|..++|++.|.....|..|+++|++   |.|.            .   |++.|.....|..|++
T Consensus        18 ~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~------------~~~~C~~~f~~~~~l~~H~~   82 (85)
T 2j7j_A           18 QLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCK------------KDDSCSFVGKTWTLYLKHVA   82 (85)
T ss_dssp             HHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECC------------SCSSCCCEESSHHHHHHHHH
T ss_pred             HHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCC------------CCCCCCCccCCHHHHHHHHH
Confidence            46677777777777777544477777777777777777776   7777            5   7777777777777776


Q ss_pred             cc
Q psy4019          79 TA   80 (109)
Q Consensus        79 ~~   80 (109)
                      ++
T Consensus        83 ~h   84 (85)
T 2j7j_A           83 EC   84 (85)
T ss_dssp             HC
T ss_pred             hc
Confidence            55

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.36  E-value=1.9e-14  Score=84.96  Aligned_cols=70  Identities=11%  Similarity=0.025  Sum_probs=61.7

Q ss_pred             chhhhccc--cCCCCCcc-cccCCCCCcC--CChhHHHHHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCcccc
Q psy4019           2 KLNLAYPL--LSSQKPYV-CGEENCTKRY--TDPSSLRKHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLS   76 (109)
Q Consensus         2 ~l~~H~~~--h~~~~p~~-C~~~~C~k~f--~~~~~l~~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H   76 (109)
                      .|..|+++  |.+++++. |..  |++.|  .....|..|+++|+++++|.|.            .|++.|.....|..|
T Consensus        34 ~L~~H~~~~~h~~~~~~~~C~~--C~~~f~f~~~~~l~~H~~~H~~~~~~~C~------------~C~k~f~~~~~L~~H   99 (115)
T 2dmi_A           34 ELTVHMNETGHYRDDNHETDNN--NPKRWSKPRKRSLLEMEGKEDAQKVLKCM------------YCGHSFESLQDLSVH   99 (115)
T ss_dssp             HHHHHHHHTCCCBCSCCCCCCC--CCSCCSSCCCCCCCCCCCSCCCCSSCBCS------------SSCCBCSSHHHHHHH
T ss_pred             HHHHHHHHhCccccCCCccCCC--CCcccccccHHHHHHHhhccCCCcceECC------------CCCCccCCHHHHHHH
Confidence            57889888  77777665 999  99998  8999999999999999999999            999999999999999


Q ss_pred             ccccccCCC
Q psy4019          77 AKTASVSSP   85 (109)
Q Consensus        77 ~~~~~~~~p   85 (109)
                      ++++.....
T Consensus       100 ~~~hh~~~~  108 (115)
T 2dmi_A          100 MIKTKHYQK  108 (115)
T ss_dssp             HHHTTTTTC
T ss_pred             HHHhCCccc
Confidence            998875433

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.35  E-value=9.9e-13  Score=68.01  Aligned_cols=48  Identities=31%  Similarity=0.498  Sum_probs=44.5

Q ss_pred             cccCCCCCcccccCCCCCcCCChhHHHHHhh-hhcCCCCcccCCCCCCCCCCCCCCCCCcCCC
Q psy4019           8 PLLSSQKPYVCGEENCTKRYTDPSSLRKHIK-TVHGEHCYANKKHKGMPSKDKDGLGGASPSR   69 (109)
Q Consensus         8 ~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~-~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~   69 (109)
                      ..|+++++|.|..  |++.|.....|..|++ +|+++++|.|.            .|++.|.+
T Consensus         5 ~~~~~~k~~~C~~--C~k~f~~~~~L~~H~~~~H~~~k~~~C~------------~C~k~F~~   53 (54)
T 2eps_A            5 SSGSVGKPYICQS--CGKGFSRPDHLNGHIKQVHTSERPHKCQ------------VWVSGPSS   53 (54)
T ss_dssp             CCCCSSCCEECSS--SCCEESSHHHHHHHHHHTSCCCCCCCSS------------SSCCSSCC
T ss_pred             CCCCCCCCeECCC--CCcccCCHHHHHHHHHHhcCCCCCccCC------------CCCCCCCC
Confidence            4578899999999  9999999999999997 89999999999            99999964

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.35  E-value=8.6e-13  Score=76.67  Aligned_cols=69  Identities=20%  Similarity=0.271  Sum_probs=63.6

Q ss_pred             ccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCC
Q psy4019           9 LLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIK   88 (109)
Q Consensus         9 ~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~   88 (109)
                      ....+++|.|..  |++.|.....|..|++.|.++++|.|.            .|++.|.....|..|+++|+...++.+
T Consensus        11 ~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~------------~C~~~f~~~~~l~~H~~~h~~~~~~~C   76 (106)
T 2ee8_A           11 PSKTKKEFICKF--CGRHFTKSYNLLIHERTHTDERPYTCD------------ICHKAFRRQDHLRDHRYIHSKEKPFKC   76 (106)
T ss_dssp             CCCCCCCCBCSS--SCCBCSSHHHHHHHHHHHCCSCCCBCS------------SSCCBCSCHHHHHHHGGGSCCCCTTSC
T ss_pred             CcCCCcCeECCC--CCCccCCHHHHHHHHHHcCCCCCcCCC------------CccchhCCHHHHHHHHHHhCCCCCeEC
Confidence            345678999999  999999999999999999999999999            999999999999999999999999987


Q ss_pred             CCC
Q psy4019          89 SEV   91 (109)
Q Consensus        89 ~~~   91 (109)
                      ..-
T Consensus        77 ~~C   79 (106)
T 2ee8_A           77 QEC   79 (106)
T ss_dssp             SSS
T ss_pred             CCc
Confidence            764

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.34  E-value=5.6e-13  Score=66.60  Aligned_cols=43  Identities=14%  Similarity=0.214  Sum_probs=41.2

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcC-CCCcccC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHG-EHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~-~kp~~C~   49 (109)
                      .|+++|+++++|.|..  |++.|.....|..|+++|++ ++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            2 SSGSSGQKEKCFKCNK--CEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCCEECSS--SCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             CCccccCCCCCEECcC--CCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            4889999999999999  99999999999999999999 9999997

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=2.8e-13  Score=67.04  Aligned_cols=43  Identities=23%  Similarity=0.290  Sum_probs=41.0

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      .|+++|+++++|.|..  |++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNE--CGKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCCEEETT--TTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CCCcCCCCCCCeECcc--cCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            5899999999999999  999999999999999999999999984

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=1.2e-12  Score=65.33  Aligned_cols=42  Identities=26%  Similarity=0.396  Sum_probs=40.1

Q ss_pred             hccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           6 AYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         6 H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      .+++|+++++|.|..  |++.|.....|..|+++|++++||.|.
T Consensus         3 ~~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytt_A            3 SGSSGEGEKPYQCSE--CGKSFSGSYRLTQHWITHTREKPSGPS   44 (46)
T ss_dssp             CSSSCSCCCTTCCSS--SCCCCSSHHHHHHHHTHHHHCCCCSCC
T ss_pred             CCCCCCCCCCeeCCC--CCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            467899999999999  999999999999999999999999998

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=1.1e-12  Score=65.43  Aligned_cols=42  Identities=29%  Similarity=0.412  Sum_probs=40.3

Q ss_pred             hccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           6 AYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         6 H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      ++++|+++++|.|..  |++.|.....|..|+++|++++||.|.
T Consensus         3 ~~~~h~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep0_A            3 SGSSGTGEKPYKCDV--CHKSFRYGSSLTVHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSTTCCSEECSS--SCCEESSHHHHHHHHTTTSSSCCCSCC
T ss_pred             CCCCCCCCCCeeCcc--cCcccCChHHHHHHHHHhCCCCCCCCC
Confidence            578899999999999  999999999999999999999999998

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=1.1e-12  Score=64.91  Aligned_cols=42  Identities=31%  Similarity=0.352  Sum_probs=40.4

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCccc
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYAN   48 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C   48 (109)
                      .|+++|+++++|.|..  |++.|.....|..|+++|++++||.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            2 SSGSSGSGEKPYECNE--CGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCSEECSS--SCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CCCcccCCCcCeECCC--CCcccCchHHHHHHHhHhcCCCCCCC
Confidence            5899999999999999  99999999999999999999999987

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.32  E-value=2.4e-12  Score=64.26  Aligned_cols=42  Identities=17%  Similarity=0.263  Sum_probs=40.0

Q ss_pred             hccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           6 AYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         6 H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      ++++|+++++|.|..  |++.|.....|..|+++|++++||.|.
T Consensus         3 ~~~~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            3 SGSSGHGERGHRCSD--CGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSSCCCSS--SCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCCCCCCcCCCC--CCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            467899999999999  999999999999999999999999997

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.32  E-value=1.3e-12  Score=74.47  Aligned_cols=69  Identities=19%  Similarity=0.239  Sum_probs=56.4

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSS   84 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~   84 (109)
                      .+.++|+++++|.|..  |++.|.....|..|+++|++++||+|.            .|.    +...|..|.+++.+.-
T Consensus        15 ~~~~~H~~~kpy~C~~--C~k~F~~~~~L~~H~~~Ht~ekp~~C~------------~~~----~~~~~~~~~~~~~~~~   76 (88)
T 1x6f_A           15 LGNGPRLQNSTYQCKH--CDSKLQSTAELTSHLNIHNEEFQKRAK------------RQE----RRKQLLSKQKYADGAF   76 (88)
T ss_dssp             CCCCSCCCCSCEECSS--SCCEESSHHHHHHHHHHHHHHHHHHCC------------CCS----CCCCCCCCCCCCCCSS
T ss_pred             ccccccCCCCCCcCCC--CCCEeCCHHHHHHHHHHhCCCCCcccc------------hhh----hHHHHHhhhccccccc
Confidence            3456799999999999  999999999999999999999999998            543    5567778888888765


Q ss_pred             CCCCCCC
Q psy4019          85 PSIKSEV   91 (109)
Q Consensus        85 p~~~~~~   91 (109)
                      .....+.
T Consensus        77 ~~~~~~~   83 (88)
T 1x6f_A           77 ADFKQES   83 (88)
T ss_dssp             SCCCCCC
T ss_pred             ccccccC
Confidence            4444433

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.31  E-value=3.1e-13  Score=71.86  Aligned_cols=41  Identities=24%  Similarity=0.426  Sum_probs=38.5

Q ss_pred             chhhhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCC
Q psy4019           2 KLNLAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEH   44 (109)
Q Consensus         2 ~l~~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~k   44 (109)
                      +|..|+++|++++||.|..  |+++|.....|..|+++|+|++
T Consensus        19 ~L~~H~~~Ht~ekp~~C~~--C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C           19 GLSRHRRAHLGYRPRSCPE--CGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             HHHHHHHHHHTCCCEECTT--TCCEESSHHHHHHHGGGGSCC-
T ss_pred             HHHHHHHHhCCCcCeECCC--CCCCcCCHHHHHHHhCccCCCC
Confidence            5889999999999999999  9999999999999999999875

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.31  E-value=3.3e-13  Score=76.96  Aligned_cols=67  Identities=25%  Similarity=0.363  Sum_probs=61.6

Q ss_pred             CCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccC--CCCCC
Q psy4019          11 SSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVS--SPSIK   88 (109)
Q Consensus        11 ~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~--~p~~~   88 (109)
                      +++++|.|..  |++.|.....|..|++.|.++++|.|.            .|++.|.....|..|++++...  .++.+
T Consensus         3 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~------------~C~~~f~~~~~l~~H~~~h~~~~~~~~~C   68 (95)
T 2yt9_A            3 SGSSGVACEI--CGKIFRDVYHLNRHKLSHSGEKPYSCP------------VCGLRFKRKDRMSYHVRSHDGSVGKPYIC   68 (95)
T ss_dssp             CCCSCEECSS--SCCEESSSHHHHHHHHHSCSSCSEECS------------SSCCEESCHHHHHHHHHHHCCCCCSSBCC
T ss_pred             CCCCCeECCC--CCCccCChHHHHHHHHhcCCCCCCcCC------------CCCCccCCHHHHHHHHHHhcCCCCCceEC
Confidence            5788999999  999999999999999999999999999            9999999999999999999886  77777


Q ss_pred             CCC
Q psy4019          89 SEV   91 (109)
Q Consensus        89 ~~~   91 (109)
                      ..-
T Consensus        69 ~~C   71 (95)
T 2yt9_A           69 QSC   71 (95)
T ss_dssp             SSS
T ss_pred             CCc
Confidence            654

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.30  E-value=2.3e-13  Score=79.47  Aligned_cols=70  Identities=7%  Similarity=0.009  Sum_probs=62.6

Q ss_pred             hhhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccC
Q psy4019           4 NLAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVS   83 (109)
Q Consensus         4 ~~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~   83 (109)
                      ..++++|+++++|.|..  |++.|.....|..|++.|.  ++|.|.            .|++.|.....|..|+. |+..
T Consensus         5 ss~~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~H~--~~~~C~------------~C~~~f~~~~~l~~H~~-H~~~   67 (107)
T 1wjp_A            5 SSGASPVENKEVYQCRL--CNAKLSSLLEQGSHERLCR--NAAVCP------------YCSLRFFSPELKQEHES-KCEY   67 (107)
T ss_dssp             CCCCCCCCCCCCCBCTT--TCCBCSSHHHHHHHHHHHH--HSBCCT------------TTCCCBSSHHHHHHHHH-HCST
T ss_pred             cccCcccCCCcCeECCC--CCCccCCHHHHHHHHHHCC--CCccCC------------CCCCccCCHHHHHHHHH-cCCC
Confidence            45788999999999999  9999999999999999984  799999            99999999999999995 8888


Q ss_pred             CCCCCCC
Q psy4019          84 SPSIKSE   90 (109)
Q Consensus        84 ~p~~~~~   90 (109)
                      .|+.+..
T Consensus        68 ~~~~C~~   74 (107)
T 1wjp_A           68 KKLTCLE   74 (107)
T ss_dssp             GGGEEGG
T ss_pred             CCccCcc
Confidence            8876653

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.30  E-value=2.1e-13  Score=76.93  Aligned_cols=68  Identities=25%  Similarity=0.485  Sum_probs=59.6

Q ss_pred             CCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCCCC
Q psy4019          12 SQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKSEV   91 (109)
Q Consensus        12 ~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~~~   91 (109)
                      |+++|.|.+..|++.|.....|..|++.|.++++|.|.            .|++.|.....|..|+++|++..++.+..-
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~------------~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   68 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCR------------ICMRNFSRSDHLTTHIRTHTGEKPFACDIC   68 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECT------------TTCCEESCHHHHHHHHHHHHCCCCEECTTT
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCC------------CCCcccCCHHHHHHHHHHcCCCCCccCCCC
Confidence            46899998223999999999999999999999999999            999999999999999999999888877653

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=2e-12  Score=64.89  Aligned_cols=43  Identities=19%  Similarity=0.383  Sum_probs=40.5

Q ss_pred             hhccccCCCCCcccc--cCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           5 LAYPLLSSQKPYVCG--EENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~--~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      .|.++|+++++|.|.  .  |++.|.....|..|+++|++++||+|.
T Consensus         2 ~~~~~H~~~k~~~C~~~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   46 (48)
T 2ent_A            2 SSGSSGTGEKPFACTWPG--CGWRFSRSDELSRHRRSHSGVKPSGPS   46 (48)
T ss_dssp             CCCCSSCCCCCEECCSSS--CCCEESSHHHHHHHHTTSCCCCSCSSC
T ss_pred             CCCCCcCCCCCeECCCCC--CCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            367899999999998  7  999999999999999999999999998

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.28  E-value=2.9e-13  Score=76.49  Aligned_cols=56  Identities=27%  Similarity=0.528  Sum_probs=50.1

Q ss_pred             CCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCcccccccccc
Q psy4019          13 QKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASV   82 (109)
Q Consensus        13 ~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~   82 (109)
                      ++||.|..  |++.|.....|..|+++|.++++|.|.            .|++.|.....|..|+++++.
T Consensus         1 ek~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~------------~C~k~f~~~~~L~~H~~~h~~   56 (88)
T 1llm_C            1 MKPFQCRI--CMRNFSRSDHLTTHIRTHTGEKPFACD------------ICGRKFARSDERKRHRDIQHI   56 (88)
T ss_dssp             CCCEECTT--TCCEESCHHHHHHHHHHHHCCCCEECT------------TTCCEESSHHHHHHHHHHHTH
T ss_pred             CCCCcCCC--CCCccCCHHHHHHHHHHcCCCCCccCC------------CCCCccCCHHHHHHHHHHhCC
Confidence            47899999  999999999999999999999999999            899999999999999887763

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.28  E-value=4.2e-12  Score=63.04  Aligned_cols=40  Identities=23%  Similarity=0.461  Sum_probs=38.5

Q ss_pred             cccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           8 PLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         8 ~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      ..|+++++|.|..  |++.|.....|..|+++|+++++|.|+
T Consensus         3 ~~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~~~~~C~   42 (45)
T 2epq_A            3 SGSSGEKPYSCPV--CGLRFKRKDRMSYHVRSHDGSVGKSGP   42 (45)
T ss_dssp             CCCSSCCSSEETT--TTEECSCHHHHHHHHHHHSCCCCCCCC
T ss_pred             CCcCCCCCCcCCC--CCcccCCHHHHHHHHHHccCCCCCCCc
Confidence            4689999999999  999999999999999999999999999

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.27  E-value=2.5e-12  Score=70.83  Aligned_cols=45  Identities=27%  Similarity=0.434  Sum_probs=43.2

Q ss_pred             chhhhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCccc
Q psy4019           2 KLNLAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYAN   48 (109)
Q Consensus         2 ~l~~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C   48 (109)
                      .|..|+++|+++++|.|..  |++.|.....|..|+++|++++||+|
T Consensus        33 ~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           33 DLSKHRRTHTGEKPYKCDE--CGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             HHHHHHTTTCCSCSEECSS--SCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             HHHHHHHHcCCCcCeeCCC--CCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            5789999999999999999  99999999999999999999999998

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=2.3e-12  Score=63.97  Aligned_cols=42  Identities=24%  Similarity=0.424  Sum_probs=40.0

Q ss_pred             hccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           6 AYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         6 H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      +.++|+++++|.|..  |++.|.....|..|+++|+++++|.|.
T Consensus         3 ~~~~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (45)
T 2epu_A            3 SGSSGTGQKPFECTH--CGKSFRAKGNLVTHQRIHTGEKSGPSS   44 (45)
T ss_dssp             CCCCCCSCCSEEETT--TTEEESSHHHHHHHHTTTSSCCCCCSC
T ss_pred             CCCCCCCCcCccCCC--CCCccCChHHHHHHHHHhCCCCCCCCC
Confidence            567899999999999  999999999999999999999999997

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.26  E-value=7.2e-12  Score=61.66  Aligned_cols=40  Identities=23%  Similarity=0.521  Sum_probs=38.4

Q ss_pred             cccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           8 PLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         8 ~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      ++|+++++|.|..  |++.|.....|..|+++|++++||.|+
T Consensus         3 ~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   42 (43)
T 2yrm_A            3 SGSSGNGAFFCNE--CDCRFSEEASLKRHTLQTHSDKSGPSS   42 (43)
T ss_dssp             SCCSSSCCBCCSS--SCCCBSSHHHHHHHHHHHTCTTCSSSC
T ss_pred             cCcCCCCCEECCC--CCCeeCChHHHHHHHHhhCCCCCccCC
Confidence            5799999999999  999999999999999999999999997

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.25  E-value=1.5e-12  Score=69.86  Aligned_cols=61  Identities=18%  Similarity=0.246  Sum_probs=53.9

Q ss_pred             cCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCC
Q psy4019          10 LSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSP   85 (109)
Q Consensus        10 h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p   85 (109)
                      ..+++||.|..  |++.|. ...|..|+++ ++++||.|..           .|++.|.....|..|+++|....+
T Consensus         5 ~C~~~~~~C~~--C~k~f~-~~~L~~H~~~-~~~~p~~C~~-----------~C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A            5 SSGKRTQPCTY--CTKEFV-FDTIQSHQYQ-CPRLPVACPN-----------QCGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             CCCCCEEECSS--SCCEEE-HHHHHHHHHH-CSSSEEECTT-----------CCSCCEEETTTHHHHHHTTSSSCC
T ss_pred             cCCCCCeeccc--cCCccC-HHHHHHHHHH-cCCcCccCCc-----------ccCcccccHHHHHHHHHhhcccCc
Confidence            45778999999  999999 9999999999 9999999971           389999999999999998876544

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.25  E-value=4.9e-12  Score=61.52  Aligned_cols=39  Identities=28%  Similarity=0.411  Sum_probs=37.4

Q ss_pred             cccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCccc
Q psy4019           8 PLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYAN   48 (109)
Q Consensus         8 ~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C   48 (109)
                      ++|+++++|.|..  |++.|.....|..|+++|++++||.|
T Consensus         3 ~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            3 SGSSGQRVYECQE--CGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SSCCCCCCEECSS--SCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CccCCCCCeECCC--CCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            5799999999999  99999999999999999999999998

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.24  E-value=2.7e-12  Score=73.15  Aligned_cols=62  Identities=11%  Similarity=0.052  Sum_probs=56.6

Q ss_pred             CCcccccCCCCCcCCChhHHHHHhhh-hcCCCC--------cccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCC
Q psy4019          14 KPYVCGEENCTKRYTDPSSLRKHIKT-VHGEHC--------YANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSS   84 (109)
Q Consensus        14 ~p~~C~~~~C~k~f~~~~~l~~H~~~-h~~~kp--------~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~   84 (109)
                      ..|.|..  |++.|.....|..|+++ |.++++        |.|.            .|++.|.....|..|+++|++..
T Consensus        24 ~~~~C~~--C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~------------~C~k~f~~~~~L~~H~~~H~~~k   89 (95)
T 2ej4_A           24 LSRPKKS--CDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECP------------REGKSFKAKYKLVNHIRVHTGEK   89 (95)
T ss_dssp             SSSSCCC--CCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCS------------STTCCCSSHHHHHHHHHHHHTCC
T ss_pred             CCCcccc--cccccCCHHHHHHHHHHhccCCCCCCccceeccCCC------------CCCcccCCHHHHHHHHHhcCCCC
Confidence            3467888  99999999999999998 999887        8999            99999999999999999999999


Q ss_pred             CCCCC
Q psy4019          85 PSIKS   89 (109)
Q Consensus        85 p~~~~   89 (109)
                      |+.+.
T Consensus        90 ~~~C~   94 (95)
T 2ej4_A           90 SGPSS   94 (95)
T ss_dssp             CCSSC
T ss_pred             CCCCC
Confidence            98775

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.24  E-value=5.4e-12  Score=63.57  Aligned_cols=39  Identities=26%  Similarity=0.409  Sum_probs=37.4

Q ss_pred             ccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           9 LLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         9 ~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      .|.++++|.|..  |++.|.....|..|+++|++++||.|.
T Consensus         6 ~~~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (48)
T 2epr_A            6 SGRTRKQVACEI--CGKIFRDVYHLNRHKLSHSGEKPYSSG   44 (48)
T ss_dssp             CCCCCCSEEETT--TTEEESSHHHHHHHGGGSCSCCCCCSC
T ss_pred             CCCCCcCeeCCC--CCcccCCHHHHHHHHHhcCCCCCccCC
Confidence            578899999999  999999999999999999999999999

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.23  E-value=2.6e-12  Score=71.05  Aligned_cols=66  Identities=12%  Similarity=0.074  Sum_probs=59.5

Q ss_pred             CchhhhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCcccccccc
Q psy4019           1 MKLNLAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTA   80 (109)
Q Consensus         1 ~~l~~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~   80 (109)
                      +.|..|+++|.+++++.|..  |++.|. ...|..|+ .+.+++||.|.            .|++.|. ...|..|++++
T Consensus         3 ~~L~~H~~~~c~~r~~~C~~--C~~~~~-~~~L~~H~-~~c~~~~~~C~------------~C~~~~~-~~~l~~H~~~c   65 (75)
T 2d9k_A            3 SGSSGHEETECPLRLAVCQH--CDLELS-ILKLKEHE-DYCGARTELCG------------NCGRNVL-VKDLKTHPEVC   65 (75)
T ss_dssp             CCCSCCCCCCCCCCCEECSS--SCCEEC-HHHHHHHH-HHHHHCEEECS------------SSCCEEE-TTGGGTHHHHB
T ss_pred             hHHHhhCcccCCCcccCCcc--cChHhh-HHHHHHHH-hHcCCCceEcc------------cCCCcCc-HHHHHHHHHHc
Confidence            35788999999999999999  999995 88999999 89999999999            9999986 58999999988


Q ss_pred             ccC
Q psy4019          81 SVS   83 (109)
Q Consensus        81 ~~~   83 (109)
                      ...
T Consensus        66 ~~~   68 (75)
T 2d9k_A           66 GRE   68 (75)
T ss_dssp             TTB
T ss_pred             cCC
Confidence            865

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.23  E-value=3.1e-12  Score=66.08  Aligned_cols=44  Identities=18%  Similarity=0.229  Sum_probs=41.0

Q ss_pred             chhhhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcc
Q psy4019           2 KLNLAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYA   47 (109)
Q Consensus         2 ~l~~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~   47 (109)
                      .|..|+++|+++++|.|..  |++.|.....|..|+++|++++||.
T Consensus        11 ~l~~h~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A           11 GTEKPRSRSQSEQPATCPI--CYAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CCCCCHHHHTSSCCEECTT--TCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             chhhHHHhcCCCCCccCCC--CCcccCCHHHHHHHHHHhccCCCCC
Confidence            5678999999999999999  9999999999999999999999874

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.22  E-value=8.1e-13  Score=73.22  Aligned_cols=63  Identities=17%  Similarity=0.262  Sum_probs=58.5

Q ss_pred             CcccccCCCCCcCCChhHHHHHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCCCC
Q psy4019          15 PYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKSEV   91 (109)
Q Consensus        15 p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~~~   91 (109)
                      ||.|..  |++.|.....|..|++.|.++++|.|.            .|++.|.....|..|++++++..++.+..-
T Consensus         1 ~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~------------~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   63 (82)
T 2kmk_A            1 SFDCKI--CGKSFKRSSTLSTHLLIHSDTRPYPCQ------------YCGKRFHQKSDMKKHTFIHTGEKPHKCQVC   63 (82)
T ss_dssp             CEECSS--SCCEESSHHHHHHHHHHHHTCCCEECS------------SSCCEESSHHHHHHHHHHHHTCCCEECTTT
T ss_pred             CccCCC--CcccccCchhHHHHHHHcCCCCCeeCC------------cCChhhCCHHHHHHHHHHhcCCCCCcCCCc
Confidence            689999  999999999999999999999999999            999999999999999999999888877653

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.16  E-value=7.4e-12  Score=71.77  Aligned_cols=70  Identities=24%  Similarity=0.305  Sum_probs=61.5

Q ss_pred             CCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCCCC
Q psy4019          12 SQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKSEV   91 (109)
Q Consensus        12 ~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~~~   91 (109)
                      ..++|.|..+.|++.|.....|..|++.|.++++|.|...          .|++.|.....|..|+++|++..++.+..-
T Consensus        12 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~----------~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   81 (100)
T 2ebt_A           12 KRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWE----------GCDWRFARSDELTRHYRKHTGAKPFQCGVC   81 (100)
T ss_dssp             SCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSS----------SCCCEESSHHHHHHHHHHHTSCCSCBCSSS
T ss_pred             cCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCC----------CCCCccCCHHHHHHHHHHhCCCCCeECCCC
Confidence            4578999855599999999999999999999999999511          599999999999999999999999887654

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.16  E-value=2.1e-12  Score=71.86  Aligned_cols=54  Identities=19%  Similarity=0.234  Sum_probs=50.9

Q ss_pred             Cccc--ccCCCCCcCCChhHHHHHhhhhcCCCCcccCCCCCCCCCCCCCC--CCCcCCCCCCcccccccccc
Q psy4019          15 PYVC--GEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSKDKDGL--GGASPSRSDDMPLSAKTASV   82 (109)
Q Consensus        15 p~~C--~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~~~~~~~~~~~~~~--C~~~f~~~~~l~~H~~~~~~   82 (109)
                      ||.|  ..  |++.|.....|..|+++|.++++|.|.            .  |++.|.....|..|++++++
T Consensus         1 p~~C~~~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~------------~~~C~~~f~~~~~l~~H~~~h~~   58 (85)
T 2j7j_A            1 MYVCHFEN--CGKAFKKHNQLKVHQFSHTQQLPYECP------------HEGCDKRFSLPSRLKRHEKVHAG   58 (85)
T ss_dssp             CEECCSTT--CCCEESSHHHHHHHHHHHHTTCCEECC------------STTCCCEESSHHHHHHHHHHHHS
T ss_pred             CccCCCCC--CCcccCCHHHHHHHHHHhCCCCCeeCC------------CCCCcCccCCHHHHHHHHHHhCC
Confidence            6889  77  999999999999999999999999998            7  99999999999999999887

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.15  E-value=4.6e-11  Score=64.84  Aligned_cols=41  Identities=20%  Similarity=0.291  Sum_probs=36.4

Q ss_pred             ccCCCCCcccccCCCCCcCCChhHHHHHh-hhhcCCCCcccC
Q psy4019           9 LLSSQKPYVCGEENCTKRYTDPSSLRKHI-KTVHGEHCYANK   49 (109)
Q Consensus         9 ~h~~~~p~~C~~~~C~k~f~~~~~l~~H~-~~h~~~kp~~C~   49 (109)
                      .+++++||.|.++.|+++|....+|..|+ ++|+++|||.|.
T Consensus        21 ~~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~   62 (73)
T 1x3c_A           21 RYSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSA   62 (73)
T ss_dssp             SSCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCC
T ss_pred             cccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCcccc
Confidence            36889999997555999999999999997 689999999996

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.12  E-value=5.4e-12  Score=70.90  Aligned_cols=69  Identities=25%  Similarity=0.338  Sum_probs=60.7

Q ss_pred             CCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCCCC
Q psy4019          13 QKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKSEV   91 (109)
Q Consensus        13 ~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~~~   91 (109)
                      ..+|.|..++|++.|.....|..|++.|.++++|.|...          .|++.|.....|..|+++|++..++.+..-
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~----------~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   71 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWD----------GCGWKFARSDELTRHYRKHTGHRPFQCQKC   71 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCST----------TTCCEESSHHHHHHHHHHHHCCCCEECSSS
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCC----------CCCCccCCHHHHHHHHHHcCCCCCccCCCC
Confidence            467899877799999999999999999999999999611          599999999999999999999988877653

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.11  E-value=2.8e-11  Score=66.06  Aligned_cols=43  Identities=28%  Similarity=0.643  Sum_probs=40.9

Q ss_pred             chhhhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCc
Q psy4019           2 KLNLAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCY   46 (109)
Q Consensus         2 ~l~~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~   46 (109)
                      .|..|+++|+++++|.|..  |++.|.....|..|+++|++++||
T Consensus        32 ~l~~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           32 NLASHKTVHTGEKPYRCNI--CGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             HHHHHHHHHCCCCSEECTT--TCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             HHHHHHHHcCCCCCEECCC--CCchhCCHHHHHHHHHhcCCCCCC
Confidence            5788999999999999999  999999999999999999999987

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.10  E-value=5.9e-14  Score=79.39  Aligned_cols=66  Identities=12%  Similarity=0.200  Sum_probs=59.9

Q ss_pred             chhhhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccc
Q psy4019           2 KLNLAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTAS   81 (109)
Q Consensus         2 ~l~~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~   81 (109)
                      .|..|+++|+++++|.|..  |++.|.....|..|++.|.+ .+|.|.            .|++.|.....|..|++...
T Consensus        18 ~L~~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~h~~-~~~~c~------------~C~~~f~~~~~L~~H~~~~h   82 (88)
T 1llm_C           18 HLTTHIRTHTGEKPFACDI--CGRKFARSDERKRHRDIQHI-LPILED------------KVEELLSKNYHLENEVARLK   82 (88)
T ss_dssp             HHHHHHHHHHCCCCEECTT--TCCEESSHHHHHHHHHHHTH-HHHHHH------------HHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHcCCCCCccCCC--CCCccCCHHHHHHHHHHhCC-CcchHH------------HHHHHHHHHhhhHHHHHHHH
Confidence            5788999999999999999  99999999999999999885 789999            99999999999999987654


Q ss_pred             c
Q psy4019          82 V   82 (109)
Q Consensus        82 ~   82 (109)
                      .
T Consensus        83 ~   83 (88)
T 1llm_C           83 K   83 (88)
T ss_dssp             H
T ss_pred             H
Confidence            3

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.09  E-value=6.7e-11  Score=67.23  Aligned_cols=46  Identities=17%  Similarity=0.195  Sum_probs=43.0

Q ss_pred             chhhhccc-cCCCCC--------cccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           2 KLNLAYPL-LSSQKP--------YVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         2 ~l~~H~~~-h~~~~p--------~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      .|..|+++ |.++++        |.|..  |++.|.....|..|+++|++++||.|.
T Consensus        40 ~L~~H~~~~H~~~~~~~~~~c~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           40 ELVTHVTMEHVGGPEQNNHVCYWEECPR--EGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             HHHHHHHHTTTCCTTCSCCCCCCTTCSS--TTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             HHHHHHHHhccCCCCCCccceeccCCCC--CCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            57889987 999888        99999  999999999999999999999999997

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.05  E-value=3e-12  Score=66.09  Aligned_cols=51  Identities=16%  Similarity=0.132  Sum_probs=46.7

Q ss_pred             CCcCCChhHHHHHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCC
Q psy4019          24 TKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPS   86 (109)
Q Consensus        24 ~k~f~~~~~l~~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~   86 (109)
                      ++.|.....|..|+++|+++++|.|.            .|++.|.....|..|+++|++..|+
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~------------~C~k~f~~~~~L~~H~~~H~~~kp~   53 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCP------------ICYAVIRQSRNLRRHLELRHFAKPG   53 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECT------------TTCCEESSHHHHHHHHHHHTTTSCC
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCC------------CCCcccCCHHHHHHHHHHhccCCCC
Confidence            46788888899999999999999999            9999999999999999999988776

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.04  E-value=1.8e-10  Score=54.41  Aligned_cols=37  Identities=32%  Similarity=0.515  Sum_probs=34.4

Q ss_pred             ccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCC
Q psy4019           7 YPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHC   45 (109)
Q Consensus         7 ~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp   45 (109)
                      +++|+++++|.|..  |++.|.....|..|+++|++++|
T Consensus         1 ~~~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            1 GSSGSSGRSYSCPV--CEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCCEETT--TTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCCCcCCCC--CCCccCCHHHHHHHHHHHcCCCC
Confidence            46899999999999  99999999999999999999875

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=99.03  E-value=1.7e-10  Score=55.35  Aligned_cols=38  Identities=13%  Similarity=0.395  Sum_probs=34.9

Q ss_pred             cCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019          10 LSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus        10 h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      |+++++|.|..  |++.|.....|..|+++|+++++|.+.
T Consensus         1 h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~~~   38 (39)
T 1njq_A            1 XWPPRSYTCSF--CKREFRSAQALGGHMNVHRRDRARLRL   38 (39)
T ss_dssp             -CCSSSEECTT--TCCEESSHHHHHHHHHTTCCSCTTTTC
T ss_pred             CCCCCceECCC--CCcccCCHHHHHHHHHHcCCCccceec
Confidence            57889999999  999999999999999999999999874

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=99.01  E-value=3.1e-10  Score=53.58  Aligned_cols=37  Identities=19%  Similarity=0.305  Sum_probs=34.2

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGE   43 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~   43 (109)
                      .|+++|++++||.|..  |++.|.....|..|+++|+++
T Consensus         1 ~H~~~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            1 GSTRGSTGIKPFQCPD--CDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CCSSTTCCSSSBCCTT--TCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCCcCCCCCCccCCC--CCcccCcHHHHHHHHHHhccC
Confidence            3789999999999999  999999999999999999874

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.01  E-value=5.3e-11  Score=69.50  Aligned_cols=46  Identities=22%  Similarity=0.309  Sum_probs=42.4

Q ss_pred             chhhhcc-cc---CCCCCcccccCCCCCcCCChhHHHHH-hhhhcCCCCcccC
Q psy4019           2 KLNLAYP-LL---SSQKPYVCGEENCTKRYTDPSSLRKH-IKTVHGEHCYANK   49 (109)
Q Consensus         2 ~l~~H~~-~h---~~~~p~~C~~~~C~k~f~~~~~l~~H-~~~h~~~kp~~C~   49 (109)
                      .|..|++ +|   ++++||.|..  |++.|.....|..| +++|++++||.|.
T Consensus        33 ~L~~H~r~~H~~~~~ekpf~C~~--Cgk~F~~~~~L~~H~~r~Htgekpy~C~   83 (102)
T 2ghf_A           33 MFTFHVDSEHPNVVLNSSYVCVE--CNFLTKRYDALSEHNLKYHPGEENFKLT   83 (102)
T ss_dssp             HHHHHHHHHCSSCCCSCCEEETT--TTEEESSTHHHHTHHHHTSTTCCCEEEE
T ss_pred             HHHHHHHhhCCCCCCCCCcCCCC--CCcccCCHHHHHHHHHHhcCCCCCeeCC
Confidence            5788987 59   6689999999  99999999999999 8999999999998

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.96  E-value=5e-10  Score=62.31  Aligned_cols=46  Identities=17%  Similarity=0.490  Sum_probs=41.6

Q ss_pred             chhhhccccCCC----CCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           2 KLNLAYPLLSSQ----KPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         2 ~l~~H~~~h~~~----~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      .|..|+++|...    ++|.|..  |++.|.....|..|+++|.+++++.|.
T Consensus        30 ~l~~H~~~~~~~~~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~~~   79 (86)
T 1x6h_A           30 LLDMHFKRYHDPNFVPAAFVCSK--CGKTFTRRNTMARHADNCAGPDGVEGE   79 (86)
T ss_dssp             HHHHHHHHTTCSSCCCCCEECSS--SCCEESCHHHHHHHHHHCCCCCSCCCC
T ss_pred             HHHHHHHHhcCCcCCCcceECCC--CCChhCCHHHHHHHHHHccCCCCcccC
Confidence            477898776654    7899999  999999999999999999999999999

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=3e-11  Score=60.10  Aligned_cols=43  Identities=12%  Similarity=-0.017  Sum_probs=39.8

Q ss_pred             HhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCCC
Q psy4019          36 HIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKSE   90 (109)
Q Consensus        36 H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~~   90 (109)
                      |+++|+++++|.|.            .|++.|.+...|..|+++|++..|+.+++
T Consensus         3 H~~~H~~~k~~~C~------------~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoh_A            3 SGSSGSGKKPYECK------------ECRKTFIQIGHLNQHKRVHTGERSSGPSS   45 (46)
T ss_dssp             CCCSCCCSCSCCCS------------SSCCCCSSHHHHHHHHHHCSSCCSCSTTC
T ss_pred             CCCCcCCCCCcCCC------------CcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            67789999999999            99999999999999999999999998865

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=7e-11  Score=58.73  Aligned_cols=44  Identities=14%  Similarity=0.111  Sum_probs=40.2

Q ss_pred             HHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCCC
Q psy4019          35 KHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKSE   90 (109)
Q Consensus        35 ~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~~   90 (109)
                      +|+++|+++++|.|.            .|++.|.+...|..|+++|++..|+.+..
T Consensus         2 ~H~~~H~~~k~~~C~------------~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A            2 SSGSSGSGEKPFQCE------------ECGKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCSSSBCCS------------SSCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             CcccCCCCCcCCCCC------------CCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            467889999999999            99999999999999999999999998764

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=1.1e-10  Score=57.99  Aligned_cols=43  Identities=19%  Similarity=0.119  Sum_probs=39.2

Q ss_pred             HhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCCC
Q psy4019          36 HIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKSE   90 (109)
Q Consensus        36 H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~~   90 (109)
                      |+++|+++++|.|.            .|++.|.+...|..|+++|++..|+.+..
T Consensus         3 h~~~h~~~k~~~C~------------~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enh_A            3 SGSSGTGEKPYECD------------VCRKAFSHHASLTQHQRVHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSSSCBCT------------TTCCBCSSSHHHHHHGGGSCCSCCCCCCC
T ss_pred             CCCCcCCCCCcCCC------------CcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            56789999999999            99999999999999999999999988764

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=7e-11  Score=58.68  Aligned_cols=44  Identities=16%  Similarity=0.125  Sum_probs=40.2

Q ss_pred             HHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCCC
Q psy4019          35 KHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKSE   90 (109)
Q Consensus        35 ~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~~   90 (109)
                      +|+++|+++++|.|.            .|++.|.+...|..|+++|++..|+.+..
T Consensus         2 ~H~~~H~~~k~~~C~------------~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCN------------ECGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSSSCSSSCC------------SSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             CcccccCCCCCeECC------------CCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            467889999999999            99999999999999999999999988764

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.93  E-value=3.5e-11  Score=58.62  Aligned_cols=42  Identities=19%  Similarity=0.151  Sum_probs=38.1

Q ss_pred             HhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCC
Q psy4019          36 HIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKS   89 (109)
Q Consensus        36 H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~   89 (109)
                      |+++|+++++|.|.            .|++.|.+...|..|+++|++..|+.++
T Consensus         1 H~~~H~~~k~~~C~------------~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECS------------ECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECS------------SSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCCCCccCC------------CcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            56789999999999            9999999999999999999999888763

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=8.2e-11  Score=57.22  Aligned_cols=41  Identities=20%  Similarity=0.201  Sum_probs=37.4

Q ss_pred             HhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCC
Q psy4019          36 HIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIK   88 (109)
Q Consensus        36 H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~   88 (109)
                      |+++|+++++|.|.            .|++.|.....|..|+++|++..|+.+
T Consensus         2 H~~~H~~~k~~~C~------------~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCD------------QCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCT------------TTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CccccCCCCCeeCC------------CccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            67789999999999            999999999999999999999888753

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=4.6e-11  Score=59.43  Aligned_cols=44  Identities=18%  Similarity=0.181  Sum_probs=40.3

Q ss_pred             HHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCCC
Q psy4019          35 KHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKSE   90 (109)
Q Consensus        35 ~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~~   90 (109)
                      .|+++|+++++|+|.            .|++.|.+...|..|+++|++..|+.++.
T Consensus         2 ~H~~~H~~~k~~~C~------------~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            2 SSGSSGTGERHYECS------------ECGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCCEECS------------SSCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             CcccCcCCCCCeECC------------cCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            367889999999999            99999999999999999999999998764

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=6.9e-11  Score=58.70  Aligned_cols=44  Identities=16%  Similarity=0.078  Sum_probs=40.1

Q ss_pred             HHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCCC
Q psy4019          35 KHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKSE   90 (109)
Q Consensus        35 ~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~~   90 (109)
                      .|+++|+++++|.|.            .|++.|.+...|..|+++|++..|+.+..
T Consensus         2 ~H~~~H~~~k~~~C~------------~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            2 SSGSSGTGEKPYKCN------------ECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSCBCS------------SSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCCcCCCCCcCeECC------------CCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            367889999999999            99999999999999999999999988764

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.92  E-value=6.4e-10  Score=59.90  Aligned_cols=44  Identities=27%  Similarity=0.585  Sum_probs=40.7

Q ss_pred             chhhhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcc
Q psy4019           2 KLNLAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYA   47 (109)
Q Consensus         2 ~l~~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~   47 (109)
                      .|..|+++|+++++|.|..  |++.|.....|..|++.|.+++|..
T Consensus        24 ~L~~H~~~H~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~p~p   67 (70)
T 1x5w_A           24 ALRIHERIHCTDRPFKCNY--CSFDTKQPSNLSKHMKKFHGDMSGP   67 (70)
T ss_dssp             HHHHHHGGGCCSCSEECSS--SSCEESSHHHHHHHHHHHHSSSCCS
T ss_pred             HHHHHHHHcCCCCCEeCCC--CCCccCCHHHHHHHHHHHhCCCCCC
Confidence            5789999999999999999  9999999999999999999988743

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=8.7e-11  Score=58.28  Aligned_cols=44  Identities=18%  Similarity=0.146  Sum_probs=40.2

Q ss_pred             HHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCCC
Q psy4019          35 KHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKSE   90 (109)
Q Consensus        35 ~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~~   90 (109)
                      +|+++|+++++|.|.            .|++.|.+...|..|+++|++..|+.+..
T Consensus         2 ~H~~~H~~~k~~~C~------------~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            2 SSGSSGTGEKPYECS------------DCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSSCCS------------SSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             ccccCCCCCCCcCCC------------CCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            367889999999999            99999999999999999999999998764

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.91  E-value=1.1e-09  Score=50.94  Aligned_cols=35  Identities=37%  Similarity=0.662  Sum_probs=32.4

Q ss_pred             ccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCC
Q psy4019           9 LLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHC   45 (109)
Q Consensus         9 ~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp   45 (109)
                      +|+++++|.|..  |++.|.....|..|+++|++++|
T Consensus         1 ~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            1 GSSGSSGYVCAL--CLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCCSEECSS--SCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCCeECCC--CcchhCCHHHHHHHHHHHcCCCC
Confidence            478999999999  99999999999999999998875

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=1e-10  Score=58.20  Aligned_cols=43  Identities=21%  Similarity=0.126  Sum_probs=39.4

Q ss_pred             HhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCCC
Q psy4019          36 HIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKSE   90 (109)
Q Consensus        36 H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~~   90 (109)
                      |+++|+++++|.|.            .|++.|.+...|..|+++|++..|+.+..
T Consensus         3 h~~~H~~~k~~~C~------------~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            3 SGSSGTGEKPYKCQ------------VCGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             CSSSCSSCCSCBCS------------SSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CCCCCCCCcccCCC------------CCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            56789999999999            99999999999999999999999988764

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=8.4e-11  Score=58.39  Aligned_cols=44  Identities=16%  Similarity=0.094  Sum_probs=40.0

Q ss_pred             HHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCCC
Q psy4019          35 KHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKSE   90 (109)
Q Consensus        35 ~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~~   90 (109)
                      .|+++|+++++|.|.            .|++.|.+...|..|+++|++..|+.+..
T Consensus         2 ~H~~~H~~~k~~~C~------------~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            2 SSGSSGTGEKPYKCN------------ECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCCTTCCS------------SSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CCCcCCCCCcCeECC------------CCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            367789999999999            99999999999999999999999988754

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.90  E-value=5.4e-11  Score=58.56  Aligned_cols=43  Identities=9%  Similarity=-0.001  Sum_probs=38.9

Q ss_pred             HHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCC
Q psy4019          35 KHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKS   89 (109)
Q Consensus        35 ~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~   89 (109)
                      +|+++|++++||.|.            .|++.|.....|..|+++|++..|+.++
T Consensus         2 ~H~~~H~~~k~~~C~------------~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            2 SSGSSGAGENPFKCS------------KCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CCSCCCSCCCSEECS------------SSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CCccccCCCCCeECC------------CCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            367889999999999            9999999999999999999999888764

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=6.5e-11  Score=58.82  Aligned_cols=43  Identities=16%  Similarity=0.147  Sum_probs=39.6

Q ss_pred             HhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCCC
Q psy4019          36 HIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKSE   90 (109)
Q Consensus        36 H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~~   90 (109)
                      |+++|+++++|.|.            .|++.|.+...|..|+++|++..|+.+..
T Consensus         3 H~~~H~~~~~~~C~------------~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            3 SGSSGTGERHYECS------------ECGKAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             CCCSCSSCCCEECS------------SSCCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             CCcccCCCCCCCCC------------CCCcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            67889999999999            99999999999999999999999988764

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=9.4e-11  Score=58.21  Aligned_cols=44  Identities=16%  Similarity=0.090  Sum_probs=40.0

Q ss_pred             HHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCCC
Q psy4019          35 KHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKSE   90 (109)
Q Consensus        35 ~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~~   90 (109)
                      .|+++|+++++|.|.            .|++.|.+...|..|+++|++..|+.+..
T Consensus         2 ~H~~~H~~~k~~~C~------------~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCN------------ECGKAFRAHSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCCCCCT------------TTTCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred             CcccccCCCCCeECC------------cCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            367889999999999            99999999999999999999999988754

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.90  E-value=1.3e-09  Score=50.69  Aligned_cols=35  Identities=23%  Similarity=0.490  Sum_probs=32.5

Q ss_pred             ccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCC
Q psy4019           9 LLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHC   45 (109)
Q Consensus         9 ~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp   45 (109)
                      +|+++++|.|..  |++.|.....|..|+++|++++|
T Consensus         1 ~H~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            1 GSSGKRPFVCRI--CLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CCSCCSCEECSS--SCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCCcCeeCCC--CCcccCCHHHHHHHHHHcCCCCC
Confidence            478999999999  99999999999999999998875

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=1e-10  Score=58.13  Aligned_cols=44  Identities=23%  Similarity=0.293  Sum_probs=40.1

Q ss_pred             HHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCCC
Q psy4019          35 KHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKSE   90 (109)
Q Consensus        35 ~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~~   90 (109)
                      .|+++|+++++|.|.            .|++.|.+...|..|+++|++..|+.+..
T Consensus         2 ~H~~~H~~~k~~~C~------------~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            2 SSGSSGMGEKCYKCD------------VCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCCCCBCS------------SSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             CCccccCCCCCeECC------------CCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            367889999999999            99999999999999999999999998764

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=1.2e-10  Score=57.86  Aligned_cols=44  Identities=14%  Similarity=0.076  Sum_probs=39.8

Q ss_pred             HHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCCC
Q psy4019          35 KHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKSE   90 (109)
Q Consensus        35 ~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~~   90 (109)
                      .|+++|+++++|.|.            .|++.|.+...|..|+++|++..|+.+..
T Consensus         2 ~H~~~H~~~k~~~C~------------~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCN------------ECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCSSCBCT------------TTCCBCSSHHHHHHHGGGTSCCCCCSCCC
T ss_pred             CCCcCCCCCcCeECC------------CCCCeeCCHHHHHHHhhhcCCCCCCCCCC
Confidence            367889999999999            99999999999999999999999987753

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=98.90  E-value=1.3e-10  Score=57.72  Aligned_cols=42  Identities=21%  Similarity=0.131  Sum_probs=38.9

Q ss_pred             HhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCC
Q psy4019          36 HIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKS   89 (109)
Q Consensus        36 H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~   89 (109)
                      |+++|+++++|.|.            .|++.|.+...|..|+++|++..|+.+.
T Consensus         3 H~~~H~~~k~~~C~------------~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ely_A            3 SGSSGTGEKPFKCV------------ECGKGFSRRSALNVHHKLHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCSBCCS------------SSCCCBSSTTHHHHHHHHHSCCSSCSCC
T ss_pred             CCCCCCCCCCcccC------------ccCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            67889999999999            9999999999999999999999988765

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=1.1e-10  Score=57.98  Aligned_cols=43  Identities=16%  Similarity=0.118  Sum_probs=39.5

Q ss_pred             HhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCCC
Q psy4019          36 HIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKSE   90 (109)
Q Consensus        36 H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~~   90 (109)
                      |+++|+++++|.|.            .|++.|.+...|..|+++|++..|+.+..
T Consensus         3 H~~~H~~~k~~~C~------------~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            3 SGSSGTGENPFICS------------ECGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCSCBCT------------TTCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCCCCCCCCCEECC------------ccCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            67889999999999            99999999999999999999999988753

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=6.7e-11  Score=57.55  Aligned_cols=41  Identities=17%  Similarity=0.088  Sum_probs=37.4

Q ss_pred             HhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCC
Q psy4019          36 HIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIK   88 (109)
Q Consensus        36 H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~   88 (109)
                      |+++|+++++|.|.            .|++.|.+...|..|+++|++..|+.+
T Consensus         1 H~~~H~~~k~~~C~------------~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2yte_A            1 GSSGSSGEKPYSCA------------ECKETFSDNNRLVQHQKMHTVKSGPSS   41 (42)
T ss_dssp             CCSSSCSCCSCBCT------------TTCCBCSSHHHHHHHHHHTSCCSSCCC
T ss_pred             CCcCcCCCCCeECC------------CCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            46789999999999            999999999999999999999888765

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.89  E-value=1.1e-09  Score=51.99  Aligned_cols=38  Identities=24%  Similarity=0.550  Sum_probs=33.4

Q ss_pred             cCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcc
Q psy4019          10 LSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYA   47 (109)
Q Consensus        10 h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~   47 (109)
                      |+++++|.|.++.|++.|.....|..|+++|+++++|.
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~   38 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKFG   38 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTTC
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            67899999992229999999999999999999999873

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.88  E-value=4.8e-11  Score=59.35  Aligned_cols=43  Identities=14%  Similarity=0.077  Sum_probs=39.8

Q ss_pred             HhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCCC
Q psy4019          36 HIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKSE   90 (109)
Q Consensus        36 H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~~   90 (109)
                      |+++|+++++|.|.            .|++.|.+...|..|+++|++..|+.++.
T Consensus         3 H~~~H~~~k~~~C~------------~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            3 SGSSGTGQRPYECI------------ECGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             SCCCCCCSSSEECS------------SSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             CccccCCCcCcCCC------------CCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            67889999999999            99999999999999999999999998764

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=1.9e-10  Score=57.03  Aligned_cols=43  Identities=16%  Similarity=0.090  Sum_probs=39.3

Q ss_pred             HHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCC
Q psy4019          35 KHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKS   89 (109)
Q Consensus        35 ~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~   89 (109)
                      .|+++|+++++|.|.            .|++.|.....|..|+++|++..|+.+.
T Consensus         2 ~H~~~H~~~~~~~C~------------~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCG------------ECGKSYNQRVHLTQHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCSEECT------------TTCCEESSSHHHHTTGGGGSSCCSSCSC
T ss_pred             CCCCCCCCCCCeECC------------CCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            367889999999999            9999999999999999999999988765

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=9.6e-11  Score=58.12  Aligned_cols=44  Identities=18%  Similarity=0.104  Sum_probs=40.1

Q ss_pred             HHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCCC
Q psy4019          35 KHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKSE   90 (109)
Q Consensus        35 ~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~~   90 (109)
                      .|+++|+++++|.|.            .|++.|.+...|..|+++|++..|+.+..
T Consensus         2 ~H~~~H~~~k~~~C~------------~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            2 SSGSSGTGEKPYICN------------ECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCSCCSEECS------------SSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCCCCCCCCcCEECC------------CCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            367889999999999            99999999999999999999999988764

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=98.88  E-value=1.4e-10  Score=57.53  Aligned_cols=43  Identities=16%  Similarity=0.098  Sum_probs=39.4

Q ss_pred             HHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCC
Q psy4019          35 KHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKS   89 (109)
Q Consensus        35 ~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~   89 (109)
                      +|+++|+++++|.|.            .|++.|.+...|..|+++|++..|+.+.
T Consensus         2 ~H~~~H~~~k~~~C~------------~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em0_A            2 SSGSSGMGEKTWKCR------------ECDMCFSQASSLRLHQNVHVGEKPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCCCCCS------------SSCCCCSSHHHHHHHGGGGSSSSCSCSS
T ss_pred             CCcCccCCCcCeECC------------CCCcccCCHHHHHHHHHHcCCCCCcCCC
Confidence            367889999999999            9999999999999999999999998765

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=1.1e-10  Score=57.28  Aligned_cols=42  Identities=12%  Similarity=0.034  Sum_probs=38.5

Q ss_pred             HHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCC
Q psy4019          35 KHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIK   88 (109)
Q Consensus        35 ~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~   88 (109)
                      .|+++|+++++|.|.            .|++.|.....|..|+++|++..|+.+
T Consensus         2 ~H~~~H~~~k~~~C~------------~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2en7_A            2 SSGSSGTGMKPYVCN------------ECGKAFRSKSYLIIHTRTHTGESGPSS   43 (44)
T ss_dssp             CSCCCSSSSSSSCCT------------TTCCCCSSHHHHHHHHTTTCCSSSSCC
T ss_pred             CCCcCCCCCcCeECC------------CCCCccCCHHHHHHHhhhcCCCCCCCC
Confidence            367889999999999            999999999999999999999888865

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=1.5e-10  Score=57.49  Aligned_cols=42  Identities=14%  Similarity=0.007  Sum_probs=38.7

Q ss_pred             HhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCC
Q psy4019          36 HIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKS   89 (109)
Q Consensus        36 H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~   89 (109)
                      |+++|+++++|.|.            .|++.|.+...|..|+++|++..|+.+.
T Consensus         3 h~~~h~~~k~~~C~------------~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2elz_A            3 SGSSGSVEKPYKCE------------DCGKGYNRRLNLDMHQRVHMGEKTSGPS   44 (46)
T ss_dssp             CCSCCCCCSSCBCS------------SSCCBCSSHHHHHHHGGGGGSCCCCCSC
T ss_pred             CCCCCCCCCCeeCc------------ccCchhCCHHHHHHHHHhcCCCCCCCCC
Confidence            57789999999999            9999999999999999999999988765

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=5.6e-11  Score=59.04  Aligned_cols=44  Identities=20%  Similarity=0.092  Sum_probs=40.1

Q ss_pred             HHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCCC
Q psy4019          35 KHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKSE   90 (109)
Q Consensus        35 ~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~~   90 (109)
                      .|+++|+++++|.|.            .|++.|.+...|..|+++|++..|+.++.
T Consensus         2 ~H~~~H~~~k~~~C~------------~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2en3_A            2 SSGSSGTGEKPFQCK------------ECGMNFSWSCSLFKHLRSHERTDPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCSEECS------------SSCCEESSSHHHHHHHHHHHHSCCSSCSC
T ss_pred             ccccccCCCCCeeCc------------ccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            367889999999999            99999999999999999999999988764

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=9.2e-11  Score=58.24  Aligned_cols=44  Identities=18%  Similarity=0.102  Sum_probs=40.1

Q ss_pred             HHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCCC
Q psy4019          35 KHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKSE   90 (109)
Q Consensus        35 ~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~~   90 (109)
                      +|+++|+++++|.|.            .|++.|.+...|..|+++|++..|+.+..
T Consensus         2 ~H~~~H~~~k~~~C~------------~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCA------------ECGKAFTDRSNLFTHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSSSCCCSEECS------------SSCCEESSHHHHHHHHTTTTTSCCCCTTC
T ss_pred             CCCCCCCCCCCeECC------------CCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            467889999999999            99999999999999999999999988754

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=1e-10  Score=58.12  Aligned_cols=42  Identities=17%  Similarity=0.162  Sum_probs=39.0

Q ss_pred             HhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCC
Q psy4019          36 HIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKS   89 (109)
Q Consensus        36 H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~   89 (109)
                      |+++|+++++|.|.            .|++.|.+...|..|+++|++..|+.+.
T Consensus         3 H~~~H~~~k~~~C~------------~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emf_A            3 SGSSGTGGKHFECT------------ECGKAFTRKSTLSMHQKIHTGEKPSGPS   44 (46)
T ss_dssp             CCSSSSSSCCEECS------------SSCCEESCHHHHHHHGGGTSCSSCSCCC
T ss_pred             cccccCCCCCeECC------------CCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            67889999999999            9999999999999999999999998775

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.87  E-value=5.8e-11  Score=59.03  Aligned_cols=44  Identities=20%  Similarity=0.120  Sum_probs=40.1

Q ss_pred             HHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCCC
Q psy4019          35 KHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKSE   90 (109)
Q Consensus        35 ~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~~   90 (109)
                      .|+++|+++++|.|.            .|++.|.+...|..|+++|++..|+.+..
T Consensus         2 ~H~~~H~~~k~~~C~------------~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            2 SSGSSGTGEKPFECA------------ECGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSEECS------------SSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCCCCCCCCEECC------------CCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            367889999999999            99999999999999999999999988764

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=1.5e-10  Score=57.44  Aligned_cols=42  Identities=17%  Similarity=0.031  Sum_probs=38.8

Q ss_pred             HhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCC
Q psy4019          36 HIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKS   89 (109)
Q Consensus        36 H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~   89 (109)
                      |+++|+++++|.|.            .|++.|.+...|..|+++|++..|+.+.
T Consensus         3 H~~~H~~~k~~~C~------------~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2epz_A            3 SGSSGTGEKPFDCI------------DCGKAFSDHIGLNQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCSSCCCCCSBCCT------------TTCCCBSSHHHHHHHHTTTTTCCCCSSC
T ss_pred             CCCCcCCCCCeECC------------CCCceeCCHHHHHHHHHHhCCCCCCCCC
Confidence            67789999999999            9999999999999999999999998775

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=8.9e-11  Score=58.23  Aligned_cols=44  Identities=14%  Similarity=0.083  Sum_probs=40.0

Q ss_pred             HHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCCC
Q psy4019          35 KHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKSE   90 (109)
Q Consensus        35 ~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~~   90 (109)
                      .|+++|+++++|.|.            .|++.|.+...|..|+++|++..|+.+..
T Consensus         2 ~H~~~H~~~k~~~C~------------~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            2 SSGSSGTGEKPFECS------------ECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSEECS------------SSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCCCCCCCcCCC------------CCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            367889999999999            99999999999999999999999988764

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=98.86  E-value=9.1e-10  Score=56.80  Aligned_cols=41  Identities=22%  Similarity=0.420  Sum_probs=38.3

Q ss_pred             chhhhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCC
Q psy4019           2 KLNLAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEH   44 (109)
Q Consensus         2 ~l~~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~k   44 (109)
                      .|..|+++|+++++|.|..  |++.|.....|..|+++|.+++
T Consensus        16 ~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A           16 MLKKHIRTHTDVRPYHCTY--CNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             HHHHHHHHTSSCCCEECSS--SSCEESSHHHHHHHHHSSSSCC
T ss_pred             HHHHHHHhcCCCCCccCCC--CCchhcCHHHHHHHHHHhcccC
Confidence            5788999999999999999  9999999999999999998875

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.86  E-value=1.3e-10  Score=56.57  Aligned_cols=41  Identities=17%  Similarity=0.182  Sum_probs=36.9

Q ss_pred             HhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCC
Q psy4019          36 HIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIK   88 (109)
Q Consensus        36 H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~   88 (109)
                      |+++|+++++|.|.            .|++.|.+...|..|+++|++..|+.+
T Consensus         2 H~~~H~~~k~~~C~------------~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCE------------ICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCS------------SSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECC------------CCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            56789999999999            999999999999999999998887753

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.86  E-value=3e-09  Score=49.13  Aligned_cols=33  Identities=27%  Similarity=0.405  Sum_probs=30.6

Q ss_pred             CCcccccCCCCCcCCChhHHHHHhhhhcCCCCccc
Q psy4019          14 KPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYAN   48 (109)
Q Consensus        14 ~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C   48 (109)
                      +||.|..  |++.|.....|..|+++|+++++|.+
T Consensus         1 kp~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~r   33 (33)
T 1rim_A            1 YKFACPE--CPKRFMRSDHLSKHITLHELLGEERR   33 (33)
T ss_dssp             CCCCCSS--SCCCCSSHHHHHHHHHHHTTTCCCCC
T ss_pred             CcccCCC--CCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            5899999  99999999999999999999999863

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=1.7e-10  Score=57.23  Aligned_cols=43  Identities=19%  Similarity=0.080  Sum_probs=39.3

Q ss_pred             HHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCC
Q psy4019          35 KHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKS   89 (109)
Q Consensus        35 ~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~   89 (109)
                      +|+++|+++++|.|.            .|++.|.+...|..|+++|++..|+.+.
T Consensus         2 ~H~~~H~~~~~~~C~------------~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eop_A            2 SSGSSGTGEKPHECR------------ECGKSFSFNSQLIVHQRIHTGENPSGPS   44 (46)
T ss_dssp             CCCCSCCCCCSCBCT------------TTCCBCSSHHHHHHHHTTTTTSCCSCCC
T ss_pred             CCccccCCCCCeeCC------------CCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            367889999999999            9999999999999999999999988764

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=8.4e-11  Score=57.80  Aligned_cols=42  Identities=26%  Similarity=0.128  Sum_probs=38.4

Q ss_pred             HHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCC
Q psy4019          35 KHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIK   88 (109)
Q Consensus        35 ~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~   88 (109)
                      .|+++|+++++|.|.            .|++.|.+...|..|+++|++..|+.+
T Consensus         2 ~H~~~H~~~k~~~C~------------~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eoj_A            2 SSGSSGTGENPYECC------------ECGKVFSRKDQLVSHQKTHSGQSGPSS   43 (44)
T ss_dssp             CSCCSSSSCCSCEET------------TTTEECSSHHHHHHHHTTSSSSCSCCC
T ss_pred             CCccccCCCcCeeCC------------CCCCccCCHHHHHHHHHHcCCCCCCCC
Confidence            367889999999999            999999999999999999999888765

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=1.7e-10  Score=57.15  Aligned_cols=43  Identities=19%  Similarity=0.154  Sum_probs=39.2

Q ss_pred             HHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCC
Q psy4019          35 KHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKS   89 (109)
Q Consensus        35 ~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~   89 (109)
                      .|+++|+++++|.|.            .|++.|.+...|..|+++|++..|+.+.
T Consensus         2 ~H~~~H~~~k~~~C~------------~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCN------------ECGKAFSQTSKLARHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CSSCCCSSCCTTCCT------------TTCCCCSSHHHHHHHHTTTTTCSCCCSC
T ss_pred             CCCcCCCCCcCcCCC------------CCCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence            367889999999999            9999999999999999999999888765

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=1.2e-10  Score=57.79  Aligned_cols=44  Identities=16%  Similarity=0.127  Sum_probs=39.9

Q ss_pred             HHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCCC
Q psy4019          35 KHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKSE   90 (109)
Q Consensus        35 ~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~~   90 (109)
                      +|+++|+++++|.|.            .|++.|.+...|..|+++|++..|+.+..
T Consensus         2 ~H~~~H~~~~~~~C~------------~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCG------------ECGKAFAQKANLTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCCEECS------------SSCCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred             CCccCCCCCCCeECC------------CCCCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            367889999999999            99999999999999999999999988753

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=1e-10  Score=57.66  Aligned_cols=42  Identities=14%  Similarity=0.020  Sum_probs=38.0

Q ss_pred             HHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCC
Q psy4019          35 KHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIK   88 (109)
Q Consensus        35 ~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~   88 (109)
                      .|+++|+++++|.|.            .|++.|.+...|..|+++|++..|+.+
T Consensus         2 ~H~~~H~~~k~~~C~------------~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            2 SSGSSGSGEKPYECN------------ECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCSEECS------------SSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CCCcccCCCcCeECC------------CCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            367889999999999            999999999999999999999888764

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=7.9e-11  Score=58.49  Aligned_cols=44  Identities=20%  Similarity=0.170  Sum_probs=40.1

Q ss_pred             HHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCCC
Q psy4019          35 KHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKSE   90 (109)
Q Consensus        35 ~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~~   90 (109)
                      .|+++|+++++|.|.            .|++.|.+...|..|+++|++..|+.+..
T Consensus         2 ~H~~~H~~~~~~~C~------------~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            2 SSGSSGTGEKPYECK------------VCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEECS------------SSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCCCCCCCcCeECC------------CCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            367889999999999            99999999999999999999999988764

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=1.9e-10  Score=57.13  Aligned_cols=42  Identities=24%  Similarity=0.147  Sum_probs=38.7

Q ss_pred             HhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCC
Q psy4019          36 HIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKS   89 (109)
Q Consensus        36 H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~   89 (109)
                      |+++|+++++|.|.            .|++.|.+...|..|+++|++..|+.+.
T Consensus         3 H~~~H~~~k~~~C~------------~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytq_A            3 SGSSGAGEKPYGCS------------ECGKAFSSKSYLIIHMRTHSGEKPSGPS   44 (46)
T ss_dssp             CSSCSSCCCSCBCS------------SSCCBCSCHHHHHHHHTTTCCSCSSCCC
T ss_pred             CCcCcCCCCCcCCC------------ccChhhCChHHHHHHHHHhCCCCCCCCC
Confidence            67789999999999            9999999999999999999999988765

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=6.3e-11  Score=58.90  Aligned_cols=44  Identities=16%  Similarity=0.109  Sum_probs=40.2

Q ss_pred             HHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCCC
Q psy4019          35 KHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKSE   90 (109)
Q Consensus        35 ~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~~   90 (109)
                      +|+++|+++++|.|.            .|++.|.+...|..|+++|++..|+.+.+
T Consensus         2 ~H~~~H~~~k~~~C~------------~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yto_A            2 SSGSSGTGEKPYKCS------------DCGKAFTRKSGLHIHQQSHTGERHSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCCEECS------------SSCCEESSHHHHHHHHHHHTCCCBTTTBC
T ss_pred             CcccccCCCCCEECc------------ccCCccCCHhHHHHHHHHcCCCCCCCCCC
Confidence            467889999999999            99999999999999999999999988764

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=7.9e-11  Score=58.44  Aligned_cols=44  Identities=20%  Similarity=0.148  Sum_probs=40.1

Q ss_pred             HHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCCC
Q psy4019          35 KHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKSE   90 (109)
Q Consensus        35 ~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~~   90 (109)
                      +|+++|+++++|.|.            .|++.|.....|..|+++|++..|+.+..
T Consensus         2 ~H~~~H~~~k~~~C~------------~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            2 SSGSSGTGEKPYKCN------------ECGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCCEECT------------TSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             CccCCCCCCCCeecc------------ccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            367889999999999            99999999999999999999999988764

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=1.1e-10  Score=57.89  Aligned_cols=44  Identities=18%  Similarity=0.106  Sum_probs=40.1

Q ss_pred             HHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCCC
Q psy4019          35 KHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKSE   90 (109)
Q Consensus        35 ~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~~   90 (109)
                      +|+++|+++++|.|.            .|++.|.....|..|+++|++..|+.+..
T Consensus         2 ~H~~~H~~~k~~~C~------------~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq3_A            2 SSGSSGTGEKPYECN------------QCGKAFSVRSSLTTHQAIHTGKKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSSEET------------TTTEECSSHHHHHHHHTTSCCCCCCCSCC
T ss_pred             CcccCCCCCCCeECC------------CCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            367889999999999            99999999999999999999999988764

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=98.84  E-value=1.4e-10  Score=57.49  Aligned_cols=43  Identities=14%  Similarity=0.057  Sum_probs=39.4

Q ss_pred             HHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCC
Q psy4019          35 KHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKS   89 (109)
Q Consensus        35 ~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~   89 (109)
                      +|+++|+++++|.|.            .|++.|.+...|..|+++|++..|+.+.
T Consensus         2 ~H~~~H~~~k~~~C~------------~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2el4_A            2 SSGSSGTGVKPYGCS------------QCAKTFSLKSQLIVHQRSHTGVKPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECS------------SSSCEESSHHHHHHHGGGSSSCCCSCCT
T ss_pred             ccccCCCCCCceECC------------CCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            467889999999999            9999999999999999999999998765

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.84  E-value=1.8e-10  Score=57.18  Aligned_cols=42  Identities=12%  Similarity=0.057  Sum_probs=38.6

Q ss_pred             HhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCcccccccccc-CCCCCCC
Q psy4019          36 HIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASV-SSPSIKS   89 (109)
Q Consensus        36 H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~-~~p~~~~   89 (109)
                      |+++|++++||.|.            .|++.|.+...|..|+++|++ ..|+.+.
T Consensus         3 H~~~H~~~k~~~C~------------~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            3 SGSSGQKEKCFKCN------------KCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCEECS------------SSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             CccccCCCCCEECc------------CCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            67789999999999            999999999999999999999 8888764

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=1.4e-10  Score=57.61  Aligned_cols=43  Identities=21%  Similarity=0.207  Sum_probs=39.4

Q ss_pred             HHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCC
Q psy4019          35 KHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKS   89 (109)
Q Consensus        35 ~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~   89 (109)
                      +|+++|+++++|.|.            .|++.|.....|..|+++|++..|+.+.
T Consensus         2 ~H~~~H~~~k~~~C~------------~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eml_A            2 SSGSSGTGEKPYECS------------VCGKAFSHRQSLSVHQRIHSGKKPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCSEECS------------SSCCEESSHHHHHHHHGGGSSCCCSCSS
T ss_pred             CccCCcCCCCCeeCC------------CcCCccCCHHHHHHHHHHhcCCCCCCCC
Confidence            467889999999999            9999999999999999999999988765

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=98.84  E-value=1.3e-10  Score=57.63  Aligned_cols=43  Identities=23%  Similarity=0.177  Sum_probs=39.5

Q ss_pred             HHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCC
Q psy4019          35 KHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKS   89 (109)
Q Consensus        35 ~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~   89 (109)
                      +|+++|+++++|.|.            .|++.|.+...|..|+++|++..|+.+.
T Consensus         2 ~H~~~H~~~k~~~C~------------~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ema_A            2 SSGSSGTGEKRYKCN------------ECGKVFSRNSQLSQHQKIHTGEKPSGPS   44 (46)
T ss_dssp             CSCSSCTTSCCEECS------------SSCCEESSHHHHHHHHTGGGCCCCCSSS
T ss_pred             CCccCCCCCcCcCCC------------CCcchhCCHHHHHHHHHhcCCCCCCCCC
Confidence            467889999999999            9999999999999999999999998775

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=98.84  E-value=1.3e-10  Score=57.75  Aligned_cols=43  Identities=21%  Similarity=0.158  Sum_probs=39.5

Q ss_pred             HHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCC
Q psy4019          35 KHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKS   89 (109)
Q Consensus        35 ~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~   89 (109)
                      +|+++|+++++|.|.            .|++.|.+...|..|+++|++..|+.+.
T Consensus         2 ~H~~~H~~~k~~~C~------------~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emk_A            2 SSGSSGTGEKPYECK------------ECGKAFSQTTHLIQHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSSCSCBCS------------SSCCBCSCHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCccCCCCceECC------------CCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            467889999999999            9999999999999999999999998775

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=8.6e-11  Score=58.29  Aligned_cols=44  Identities=16%  Similarity=0.106  Sum_probs=40.1

Q ss_pred             HHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCCC
Q psy4019          35 KHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKSE   90 (109)
Q Consensus        35 ~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~~   90 (109)
                      .|+++|+++++|.|.            .|++.|.+...|..|+++|++..|+.+..
T Consensus         2 ~H~~~H~~~~~~~C~------------~C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            2 SSGSSGTGEKPYNCE------------ECGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSSSSSCCCSEECT------------TTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CCCcCcCCCcCccCC------------CCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            367889999999999            99999999999999999999999998764

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=1.5e-10  Score=57.51  Aligned_cols=43  Identities=12%  Similarity=0.097  Sum_probs=39.5

Q ss_pred             HhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCCC
Q psy4019          36 HIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKSE   90 (109)
Q Consensus        36 H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~~   90 (109)
                      |+++|+++++|.|.            .|++.|.+...|..|+++|++..|+.+..
T Consensus         3 h~~~H~~~k~~~C~------------~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            3 SGSSGAGKKLFKCN------------ECKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSCCSSCCCBCT------------TTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCCCCCCEECC------------ccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            67789999999999            99999999999999999999999988754

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=1.4e-10  Score=57.59  Aligned_cols=44  Identities=18%  Similarity=0.100  Sum_probs=40.0

Q ss_pred             HHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCCC
Q psy4019          35 KHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKSE   90 (109)
Q Consensus        35 ~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~~   90 (109)
                      +|+++|+++++|.|.            .|++.|.+...|..|+++|++..|+.+..
T Consensus         2 ~H~~~H~~~k~~~C~------------~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytj_A            2 SSGSSGTGEKPYICA------------ECGKAFTIRSNLIKHQKIHTKQKPSGPSS   45 (46)
T ss_dssp             CSSCTTSSCCSEECS------------SSCCEESSHHHHHHHHHHTSCCCCSSCSC
T ss_pred             CcccCCCCCcCeECC------------CCChhhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            477889999999999            99999999999999999999999987753

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=1.3e-10  Score=57.63  Aligned_cols=43  Identities=28%  Similarity=0.160  Sum_probs=39.4

Q ss_pred             HHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCC
Q psy4019          35 KHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKS   89 (109)
Q Consensus        35 ~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~   89 (109)
                      .|+++|+++++|.|.            .|++.|.+...|..|+++|++..|+.+.
T Consensus         2 ~H~~~H~~~k~~~C~------------~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCK------------ECGKSFSRAPCLLKHERLHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCSSCCCCCCBT------------TTTBCCSCHHHHHHHHHHCCSSSCCCCC
T ss_pred             CCcccCCCCCCeECC------------CCCCccCchHHHHHHHHhcCCCCCCCCC
Confidence            367889999999999            9999999999999999999999988765

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=98.83  E-value=1.8e-10  Score=57.10  Aligned_cols=43  Identities=23%  Similarity=0.098  Sum_probs=39.3

Q ss_pred             HHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCC
Q psy4019          35 KHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKS   89 (109)
Q Consensus        35 ~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~   89 (109)
                      .|+++|+++++|.|.            .|++.|.+...|..|+++|++..|+.+.
T Consensus         2 ~H~~~H~~~k~~~C~------------~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em9_A            2 SSGSSGTGEKPYNCK------------ECGKSFRWASCLLKHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CSCCSCCCCCSEECS------------SSCCEESSHHHHHHHGGGGTSCCCCSTT
T ss_pred             CCCCCCCCCcCeECC------------ccccccCChHHHHHHHHHhCCCCCCCCC
Confidence            367889999999999            9999999999999999999999988765

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=1.5e-10  Score=57.49  Aligned_cols=43  Identities=16%  Similarity=0.083  Sum_probs=39.2

Q ss_pred             HHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCC
Q psy4019          35 KHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKS   89 (109)
Q Consensus        35 ~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~   89 (109)
                      .|+++|+++++|.|.            .|++.|.+...|..|+++|++..|+.+.
T Consensus         2 ~H~~~H~~~k~~~C~------------~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ene_A            2 SSGSSGTGEKPYKCN------------ECGKVFRHNSYLSRHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCCSSSEECS------------SSCCEESSHHHHHHHHTTTCCCCCCSCC
T ss_pred             CcccCCCCCCCeECC------------CCCchhCChHHHHHHHhhcCCCCCCCCC
Confidence            367889999999999            9999999999999999999999988765

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=1.4e-10  Score=57.61  Aligned_cols=43  Identities=16%  Similarity=0.130  Sum_probs=39.4

Q ss_pred             HHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCC
Q psy4019          35 KHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKS   89 (109)
Q Consensus        35 ~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~   89 (109)
                      +|+++|+++++|.|.            .|++.|.+...|..|+++|++..|+.+.
T Consensus         2 ~H~~~H~~~k~~~C~------------~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCN------------ECGKVFTQNSHLARHRRVHTGGKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCSSEECS------------SSCCEESSSHHHHHHTHHHHSCCCSCSC
T ss_pred             CcCcCCCCCCCeECC------------cCCchhCCHHHHHHHHHhcCCCCCCCCC
Confidence            367889999999999            9999999999999999999999998765

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=1.7e-10  Score=57.29  Aligned_cols=43  Identities=16%  Similarity=0.128  Sum_probs=39.3

Q ss_pred             HHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCC
Q psy4019          35 KHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKS   89 (109)
Q Consensus        35 ~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~   89 (109)
                      .|+++|+++++|.|.            .|++.|.+...|..|+++|++..|+.+.
T Consensus         2 ~H~~~H~~~~~~~C~------------~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCD------------ICGKSFCGRSRLNRHSMVHTAEKPSGPS   44 (46)
T ss_dssp             CCCCCSSSSCSCCCS------------SSCCCCSSHHHHHHHHHHTTCCCSSSCC
T ss_pred             CCCCCCCCCCCcCCC------------cCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            367889999999999            9999999999999999999999988765

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.83  E-value=1.8e-10  Score=57.17  Aligned_cols=42  Identities=19%  Similarity=0.055  Sum_probs=38.8

Q ss_pred             HhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCC
Q psy4019          36 HIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKS   89 (109)
Q Consensus        36 H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~   89 (109)
                      |+++|+++++|.|.            .|++.|.+...|..|+++|++..|+.+.
T Consensus         3 H~~~H~~~k~~~C~------------~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em7_A            3 SGSSGTGEKPYKCE------------ECGKGFICRRDLYTHHMVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSSCCCSEECS------------SSCCEESCHHHHHHHGGGGTTCCCSSTT
T ss_pred             CCCCCCCCcCccCC------------CccchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            67789999999999            9999999999999999999999998765

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1.4e-10  Score=57.58  Aligned_cols=44  Identities=18%  Similarity=0.207  Sum_probs=39.9

Q ss_pred             HHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCCC
Q psy4019          35 KHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKSE   90 (109)
Q Consensus        35 ~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~~   90 (109)
                      .|+++|+++++|.|.            .|++.|.+...|..|+++|++..|+.+..
T Consensus         2 ~H~~~H~~~k~~~C~------------~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep2_A            2 SSGSSGTGEKPYECS------------ICGKSFTKKSQLHVHQQIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSSCSSCCCSEECS------------SSCCEESSHHHHHHHHHTTSSCCSCCSCC
T ss_pred             CCCCCCCCCcCcCCC------------CCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            467889999999999            99999999999999999999999987753

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1.8e-10  Score=57.09  Aligned_cols=43  Identities=14%  Similarity=-0.004  Sum_probs=39.3

Q ss_pred             HHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCC
Q psy4019          35 KHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKS   89 (109)
Q Consensus        35 ~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~   89 (109)
                      .|+++|+++++|.|.            .|++.|.+...|..|+++|++..|+.+.
T Consensus         2 ~H~~~H~~~k~~~C~------------~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2epw_A            2 SSGSSGTGEKPCKCT------------ECGKAFCWKSQLIMHQRTHVDDKHSGPS   44 (46)
T ss_dssp             CCCCCCCCCCSEECS------------SSCCEESSSHHHHHHHHHCCSCCCSCCC
T ss_pred             cCcccCCCCCCeeCC------------CCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            467889999999999            9999999999999999999999988765

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.82  E-value=2.7e-09  Score=61.36  Aligned_cols=44  Identities=14%  Similarity=0.247  Sum_probs=38.8

Q ss_pred             chhhhccccCCCCCcccccCCCCCcCCChhHHHHH-hhhhcCCCCccc
Q psy4019           2 KLNLAYPLLSSQKPYVCGEENCTKRYTDPSSLRKH-IKTVHGEHCYAN   48 (109)
Q Consensus         2 ~l~~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H-~~~h~~~kp~~C   48 (109)
                      +|..|+++| ++++|.|..  |++.|.....|..| +++|+++..|.+
T Consensus        50 ~L~~H~~~h-~~k~~~C~~--Cgk~F~~~~~L~~H~~~~H~~~p~~~~   94 (96)
T 2ctd_A           50 GLKKHMENC-KQEMFTCHH--CGKQLRSLAGMKYHVMANHNSLPSGPS   94 (96)
T ss_dssp             HHHHHHHHH-CCCCCCCSS--SCCCCSSHHHHHHHHHHHTCCCSSCSC
T ss_pred             HHHHHHHHH-CCCCeECCC--CCCeeCCHHHHHHHhHHhcCCCCCCCC
Confidence            578999999 999999999  99999999999999 889987654443

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1.8e-10  Score=57.17  Aligned_cols=43  Identities=19%  Similarity=0.100  Sum_probs=39.3

Q ss_pred             HHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCC
Q psy4019          35 KHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKS   89 (109)
Q Consensus        35 ~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~   89 (109)
                      .|+++|+++++|.|.            .|++.|.+...|..|+++|++..|+.+.
T Consensus         2 ~H~~~H~~~k~~~C~------------~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCH------------ECGKVFRRNSHLARHQLIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCTTCCCCEECT------------TTCCEESSHHHHHHHHTTTCCCCCSCCS
T ss_pred             CCCcCCCCCCCeECC------------CCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            367789999999999            9999999999999999999999998765

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=7.4e-11  Score=58.65  Aligned_cols=44  Identities=16%  Similarity=0.086  Sum_probs=40.1

Q ss_pred             HHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCCC
Q psy4019          35 KHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKSE   90 (109)
Q Consensus        35 ~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~~   90 (109)
                      +|+++|+++++|.|.            .|++.|.+...|..|+++|++..|+.+..
T Consensus         2 ~H~~~H~~~k~~~C~------------~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCN------------VCGKAFVLSAHLNQHLRVHTQETLSGPSS   45 (46)
T ss_dssp             CSCCCCSSCCSEEET------------TTTEEESSHHHHHHHHHHHSSCCSSSCCC
T ss_pred             CccccCCCCCCeECc------------ccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            367889999999999            99999999999999999999999988764

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1.1e-10  Score=57.25  Aligned_cols=42  Identities=12%  Similarity=0.053  Sum_probs=38.4

Q ss_pred             HHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCC
Q psy4019          35 KHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIK   88 (109)
Q Consensus        35 ~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~   88 (109)
                      +|+++|+++++|.|.            .|++.|.+...|..|+++|++..|+.+
T Consensus         2 ~H~~~H~~~k~~~C~------------~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eof_A            2 SSGSSGTGEKPYECN------------ECQKAFNTKSNLMVHQRTHTGESGPSS   43 (44)
T ss_dssp             CCSSCCSCCCSEECT------------TTCCEESCHHHHHHHHHHTTTSSCSCC
T ss_pred             CCccCCCCCCCeECC------------CCCcccCCHhHHHHHHHHhCCCCCCCC
Confidence            367889999999999            999999999999999999999888865

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=98.81  E-value=1.5e-09  Score=61.22  Aligned_cols=41  Identities=22%  Similarity=0.421  Sum_probs=37.3

Q ss_pred             chhhhccccCCCCCcccccCCCCCcCCChhHHHHHh-hhhcCCC
Q psy4019           2 KLNLAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHI-KTVHGEH   44 (109)
Q Consensus         2 ~l~~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~-~~h~~~k   44 (109)
                      +|..|+++|++++||.|..  |+++|.....|.+|+ ++|.+|.
T Consensus        43 ~L~~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           43 AQERHLRLLHAAQVFPCKY--CPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             HHHHHHHTTSCSSSEECTT--SSCEESSHHHHHHHHHTTCTTCC
T ss_pred             HHhhhhhhccCCCccCCCC--CCCEeCCHHHHHHhCcccCcCCC
Confidence            5889999999999999999  999999999999996 5787764

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.81  E-value=4.3e-09  Score=50.65  Aligned_cols=35  Identities=23%  Similarity=0.248  Sum_probs=30.6

Q ss_pred             ccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCC
Q psy4019           9 LLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGE   43 (109)
Q Consensus         9 ~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~   43 (109)
                      .+++++||.|..+.|+++|.....|.+|+++|+++
T Consensus         3 ~~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            3 SGSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             CSSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            46889999997444999999999999999999975

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=1.6e-10  Score=57.31  Aligned_cols=43  Identities=16%  Similarity=0.111  Sum_probs=39.4

Q ss_pred             HHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCC
Q psy4019          35 KHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKS   89 (109)
Q Consensus        35 ~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~   89 (109)
                      +|+++|+++++|.|.            .|++.|.+...|..|+++|++..|+.+.
T Consensus         2 ~H~~~H~~~~~~~C~------------~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCN------------ECGKVFTQNSHLANHQRIHTGVKPSGPS   44 (46)
T ss_dssp             CCSSCCCCCCSSEET------------TTTEECSSHHHHHHHHGGGSCCCSCSSC
T ss_pred             CCCCCCCCCCCeECC------------CcChhhCCHHHHHHHHHHcCCCCCCCCC
Confidence            367889999999999            9999999999999999999999998765

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=1.3e-10  Score=57.76  Aligned_cols=44  Identities=16%  Similarity=0.055  Sum_probs=39.8

Q ss_pred             HHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCCC
Q psy4019          35 KHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKSE   90 (109)
Q Consensus        35 ~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~~   90 (109)
                      .|+++|+++++|.|.            .|++.|.+...|..|+++|++..|+.+..
T Consensus         2 ~h~~~H~~~k~~~C~------------~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emz_A            2 SSGSSGSGERPFKCN------------ECGKGFGRRSHLAGHLRLHSREKSSGPSS   45 (46)
T ss_dssp             CCCSCSSCCCSCCCS------------SSCCCCSSHHHHHHHHHHHHHTTCCCSCC
T ss_pred             CCCcCCCCCCCeECC------------CCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            367889999999999            99999999999999999999999987753

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.80  E-value=3.4e-09  Score=49.92  Aligned_cols=35  Identities=26%  Similarity=0.361  Sum_probs=32.3

Q ss_pred             cccCCCCCcccccCCCCCcCCCh-hHHHHHhhhhcCCC
Q psy4019           8 PLLSSQKPYVCGEENCTKRYTDP-SSLRKHIKTVHGEH   44 (109)
Q Consensus         8 ~~h~~~~p~~C~~~~C~k~f~~~-~~l~~H~~~h~~~k   44 (109)
                      ++|+++++|.|..  |++.|... ..|..|+++|++++
T Consensus         2 ~~h~~~k~~~C~~--C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            2 SSGSSGRAMKCPY--CDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             CSCCCCCCEECSS--SSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCeECCC--CChhhccCHHHHHHHHHhcCCCC
Confidence            5789999999999  99999999 99999999998864

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.80  E-value=2.1e-10  Score=56.38  Aligned_cols=42  Identities=14%  Similarity=0.015  Sum_probs=38.3

Q ss_pred             HHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCC
Q psy4019          35 KHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIK   88 (109)
Q Consensus        35 ~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~   88 (109)
                      .|+++|+++++|.|.            .|++.|.....|..|+++|++..|+.+
T Consensus         2 ~H~~~H~~~k~~~C~------------~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2emb_A            2 SSGSSGHTRKRYECS------------KCQATFNLRKHLIQHQKTHAAKSGPSS   43 (44)
T ss_dssp             CCCSCCCCCSSEECT------------TTCCEESCHHHHHHHGGGGCCCCCTTC
T ss_pred             CcccccCCCCCeECC------------CCCCccCCHHHHHHHHHHcCCCCCcCC
Confidence            367889999999999            999999999999999999999888865

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=9.4e-11  Score=57.06  Aligned_cols=41  Identities=20%  Similarity=0.137  Sum_probs=37.1

Q ss_pred             HhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCC
Q psy4019          36 HIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIK   88 (109)
Q Consensus        36 H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~   88 (109)
                      |+++|++++||.|.            .|++.|.+...|..|+++|++..|+.+
T Consensus         2 H~~~H~~~k~~~C~------------~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCE------------TCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECT------------TTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCC------------CcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            56789999999999            999999999999999999999888753

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=2e-10  Score=56.97  Aligned_cols=43  Identities=14%  Similarity=0.115  Sum_probs=39.5

Q ss_pred             HHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCC
Q psy4019          35 KHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKS   89 (109)
Q Consensus        35 ~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~   89 (109)
                      .|+++|+++++|.|.            .|++.|.+...|..|+++|++..|+.+.
T Consensus         2 ~H~~~H~~~~~~~C~------------~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en1_A            2 SSGSSGSGEKPFKCE------------ECGKRFTQNSQLHSHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CSTTCCCCCCSEEET------------TTTEEESSHHHHHHHGGGGSCCCCSCCC
T ss_pred             CcccCCCCCCCeeCC------------CCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            477889999999999            9999999999999999999999988765

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.80  E-value=1.2e-10  Score=57.26  Aligned_cols=42  Identities=17%  Similarity=0.082  Sum_probs=38.4

Q ss_pred             HhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCC
Q psy4019          36 HIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKS   89 (109)
Q Consensus        36 H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~   89 (109)
                      |+++|+++++|.|.            .|++.|.+...|..|+++|++..|+.+.
T Consensus         1 H~~~H~~~k~~~C~------------~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (44)
T 2emx_A            1 GSSGSSGEKPFGCS------------CCEKAFSSKSYLLVHQQTHAEEKPSGPS   42 (44)
T ss_dssp             CCCCCSSCCCEECS------------SSSCEESSHHHHHHHHHHHTSSCSCSCC
T ss_pred             CCCCcCCCcCccCC------------CCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            56789999999999            9999999999999999999999988765

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=2e-10  Score=56.96  Aligned_cols=43  Identities=19%  Similarity=0.066  Sum_probs=39.2

Q ss_pred             HHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCC
Q psy4019          35 KHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKS   89 (109)
Q Consensus        35 ~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~   89 (109)
                      +|+++|+++++|.|.            .|++.|.....|..|+++|++..|+.+.
T Consensus         2 ~H~~~H~~~~~~~C~------------~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eov_A            2 SSGSSGTGEKPYKCS------------DCGKSFTWKSRLRIHQKCHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCSSCCSCBCS------------SSCCBCSSHHHHHHHHHHHSCCSSCCSC
T ss_pred             CCCCCCCCCCCccCC------------ccChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            467889999999999            9999999999999999999999888765

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=2.7e-10  Score=56.45  Aligned_cols=43  Identities=19%  Similarity=0.135  Sum_probs=39.3

Q ss_pred             HHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCC
Q psy4019          35 KHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKS   89 (109)
Q Consensus        35 ~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~   89 (109)
                      .|+++|+++++|.|.            .|++.|.....|..|+++|++..|+.+.
T Consensus         2 ~H~~~H~~~k~~~C~------------~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eme_A            2 SSGSSGSGEKPYVCD------------YCGKAFGLSAELVRHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCTTCCCCSEECS------------SSCCEESSHHHHHHHHGGGCCCSCCSSC
T ss_pred             CCCCCCCCCCCeECC------------CCChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            367889999999999            9999999999999999999999888765

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=1.5e-10  Score=57.48  Aligned_cols=43  Identities=16%  Similarity=0.089  Sum_probs=39.4

Q ss_pred             HhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCCC
Q psy4019          36 HIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKSE   90 (109)
Q Consensus        36 H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~~   90 (109)
                      |+++|+++++|.|.            .|++.|.+...|..|+++|++..|+.+..
T Consensus         3 H~~~H~~~k~~~C~------------~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em2_A            3 SGSSGSGEKPFKCK------------ECGKAFRQNIHLASHLRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCSEECS------------SSCCEESSHHHHHHHHHHHCCCCSSCSSC
T ss_pred             CCCCCCCCCCEECC------------cCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            67789999999999            99999999999999999999999987753

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=1.4e-10  Score=57.55  Aligned_cols=43  Identities=23%  Similarity=0.151  Sum_probs=39.4

Q ss_pred             HHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCC
Q psy4019          35 KHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKS   89 (109)
Q Consensus        35 ~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~   89 (109)
                      +|+++|+++++|.|.            .|++.|.+...|..|+++|++..|+.+.
T Consensus         2 ~H~~~H~~~k~~~C~------------~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emy_A            2 SSGSSGTGENPYECH------------ECGKAFSRKYQLISHQRTHAGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSCCEECS------------SSCCEESSHHHHHHHHHHHTTSCCSCSS
T ss_pred             CCCCCCCCCcCcCCC------------CCCcccCcHHHHHHHHHHcCCCCCCCCC
Confidence            467889999999999            9999999999999999999999988765

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.79  E-value=2.3e-10  Score=56.68  Aligned_cols=43  Identities=12%  Similarity=-0.038  Sum_probs=39.2

Q ss_pred             HHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCC
Q psy4019          35 KHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKS   89 (109)
Q Consensus        35 ~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~   89 (109)
                      +|+++|+++++|.|.            .|++.|.+...|..|+++|++..|+.+.
T Consensus         2 ~H~~~H~~~~~~~C~------------~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en8_A            2 SSGSSGSGEKSHTCD------------ECGKNFCYISALRIHQRVHMGEKCSGPS   44 (46)
T ss_dssp             CCCCCCCCCSSEECT------------TTCCEESSHHHHHHHHTTTCCSCSSCCS
T ss_pred             CccccCCCCCCeECC------------CcCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            367889999999999            9999999999999999999999888764

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=1.3e-10  Score=57.68  Aligned_cols=43  Identities=19%  Similarity=0.144  Sum_probs=39.4

Q ss_pred             HHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCC
Q psy4019          35 KHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKS   89 (109)
Q Consensus        35 ~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~   89 (109)
                      +|+++|+++++|.|.            .|++.|.+...|..|+++|++..|+.+.
T Consensus         2 ~H~~~H~~~k~~~C~------------~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emh_A            2 SSGSSGTGERPYICT------------VCGKAFTDRSNLIKHQKIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSCSCCCSEECT------------TTCCEESSHHHHHHHHHHHHCSSCSSSC
T ss_pred             CCCCCCCCCCCcCCC------------CCCchhCCHHHHHHHHHhcCCCCCCCCC
Confidence            367889999999999            9999999999999999999999998775

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=3.6e-10  Score=56.15  Aligned_cols=42  Identities=14%  Similarity=0.018  Sum_probs=38.5

Q ss_pred             HhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCcccccc-ccccCCCCCCC
Q psy4019          36 HIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAK-TASVSSPSIKS   89 (109)
Q Consensus        36 H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~-~~~~~~p~~~~   89 (109)
                      |+++|+++++|.|.            .|++.|.....|..|++ +|++..|+.+.
T Consensus         3 H~~~H~~~k~~~C~------------~C~k~F~~~~~L~~H~~~~H~~~k~~~C~   45 (47)
T 2epx_A            3 SGSSGTGKKPYECI------------ECGKAFIQNTSLIRHWRYYHTGEKPSGPS   45 (47)
T ss_dssp             CCCCCCCCCSBCCS------------SSCCCBSSHHHHHHHHTTTTTTSCSSSCC
T ss_pred             cccccCCCCCEECC------------ccCchhCChHHHHHHhHhhcCCCCCCCCC
Confidence            67789999999999            99999999999999999 99999888764

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=1.6e-10  Score=57.25  Aligned_cols=43  Identities=19%  Similarity=0.035  Sum_probs=39.3

Q ss_pred             HHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCC
Q psy4019          35 KHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKS   89 (109)
Q Consensus        35 ~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~   89 (109)
                      .|+++|+++++|.|.            .|++.|.+...|..|+++|++..|+.+.
T Consensus         2 ~H~~~H~~~k~~~C~------------~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emm_A            2 SSGSSGTGERPHKCN------------ECGKSFIQSAHLIQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCSSCCCSEECS------------SSCCEESSHHHHHHHHHHHSCCCTTSSS
T ss_pred             CCcCCcCCCCCeeCC------------CCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            367889999999999            9999999999999999999999988765

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=1.9e-10  Score=56.50  Aligned_cols=42  Identities=12%  Similarity=0.010  Sum_probs=38.3

Q ss_pred             HHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCC
Q psy4019          35 KHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIK   88 (109)
Q Consensus        35 ~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~   88 (109)
                      .|+++|+++++|.|.            .|++.|.+...|..|+++|++..|+.+
T Consensus         2 ~H~~~H~~~~~~~C~------------~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eox_A            2 SSGSSGTDSKSYNCN------------ECGKAFTRIFHLTRHQKIHTRKSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCCEEET------------TTTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred             CCCcCCCCCCCeECc------------ccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            367889999999999            999999999999999999999888765

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.78  E-value=1.5e-10  Score=56.24  Aligned_cols=41  Identities=22%  Similarity=0.248  Sum_probs=37.0

Q ss_pred             HhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCC
Q psy4019          36 HIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIK   88 (109)
Q Consensus        36 H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~   88 (109)
                      |+++|+++++|.|.            .|++.|.+...|..|++++++..|+.+
T Consensus         2 H~~~H~~~~~~~C~------------~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCG------------QCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECS------------SSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECC------------CCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            56789999999999            999999999999999999999888753

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.78  E-value=2.9e-09  Score=57.64  Aligned_cols=41  Identities=27%  Similarity=0.430  Sum_probs=38.2

Q ss_pred             chhhhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCC
Q psy4019           2 KLNLAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEH   44 (109)
Q Consensus         2 ~l~~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~k   44 (109)
                      .|..|+++|.++++|.|..  |++.|.....|..|+++|+++.
T Consensus        29 ~L~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A           29 ILVQHQRVHTGEKPYKCLE--CGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             HHHHHHHGGGCSCCEECSS--SCCEESSHHHHHHHHHHHHSSS
T ss_pred             HHHHHHHhcCCCCCeECCC--CCcccCCHHHHHHHHHhcCCCC
Confidence            5788999999999999999  9999999999999999998764

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.78  E-value=2.7e-10  Score=56.56  Aligned_cols=43  Identities=9%  Similarity=-0.031  Sum_probs=39.3

Q ss_pred             HHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCC
Q psy4019          35 KHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKS   89 (109)
Q Consensus        35 ~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~   89 (109)
                      +|+++|+++++|.|.            .|++.|.....|..|+++|++..|+.+.
T Consensus         2 ~H~~~H~~~~~~~C~------------~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em5_A            2 SSGSSGSSTKSHQCH------------ECGRGFTLKSHLNQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSCSEECS------------SSCCEESSHHHHHHHHTTTSCSCCSSCC
T ss_pred             CCcCCCCCCCCeECC------------cCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            367889999999999            9999999999999999999999988765

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=1.7e-10  Score=57.21  Aligned_cols=43  Identities=16%  Similarity=0.094  Sum_probs=39.4

Q ss_pred             HHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCC
Q psy4019          35 KHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKS   89 (109)
Q Consensus        35 ~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~   89 (109)
                      +|+++|+++++|.|.            .|++.|.+...|..|+++|++..|+.+.
T Consensus         2 ~H~~~H~~~~~~~C~------------~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCN------------ECGKVFTQNSHLTNHWRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSSSSCSEECS------------SSCCEESSHHHHHHHHHHHSSSSCSSCC
T ss_pred             CCcccCCCCCCEeCC------------cCCCccCCHHHHHHHHHHHCCCCCCCCC
Confidence            367889999999999            9999999999999999999999998775

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=1.7e-10  Score=57.20  Aligned_cols=42  Identities=19%  Similarity=0.143  Sum_probs=38.7

Q ss_pred             HhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCC
Q psy4019          36 HIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKS   89 (109)
Q Consensus        36 H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~   89 (109)
                      |+++|+++++|.|.            .|++.|.+...|..|+++|++..|+.+.
T Consensus         3 H~~~h~~~k~~~C~------------~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ysp_A            3 SGSSGTGEKPYKCE------------KCGKGYNSKFNLDMHQKVHTGERPSGPS   44 (46)
T ss_dssp             CCCCCSSCCSEEET------------TTTEEESCHHHHHHHHTTSCSCCSSCCS
T ss_pred             CCcCCCCCCCeECC------------CCCCccCCHHHHHHHHHhhCCCCCCCCC
Confidence            67789999999999            9999999999999999999999988765

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.77  E-value=3e-10  Score=56.37  Aligned_cols=42  Identities=17%  Similarity=0.017  Sum_probs=38.6

Q ss_pred             HhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCC
Q psy4019          36 HIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKS   89 (109)
Q Consensus        36 H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~   89 (109)
                      |+++|+++++|.|.            .|++.|.+...|..|+++|++..|+.+.
T Consensus         3 h~~~h~~~k~~~C~------------~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2el6_A            3 SGSSGAGVNPYKCS------------QCEKSFSGKLRLLVHQRMHTREKPSGPS   44 (46)
T ss_dssp             SCCSSCCCCSEECS------------SSSCEESSHHHHHHHHGGGCCSSCCSCC
T ss_pred             CCCCCCCCCCeECC------------CCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            56789999999999            9999999999999999999999988764

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=1.4e-10  Score=57.57  Aligned_cols=43  Identities=19%  Similarity=0.050  Sum_probs=39.3

Q ss_pred             HHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCC
Q psy4019          35 KHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKS   89 (109)
Q Consensus        35 ~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~   89 (109)
                      .|+++|+++++|.|.            .|++.|.+...|..|+++|++..|+.+.
T Consensus         2 ~H~~~H~~~k~~~C~------------~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoo_A            2 SSGSSGSGERPYGCN------------ECGKNFGRHSHLIEHLKRHFREKSSGPS   44 (46)
T ss_dssp             CCCCCCSCCCCEECS------------SSCCEESSHHHHHHHHHHHHSTTSSCCS
T ss_pred             CCCCCCCCCCCEEcc------------ccCcccCCHHHHHHHHHHHcCCCCCCCC
Confidence            467889999999999            9999999999999999999999888764

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.77  E-value=3.4e-09  Score=50.11  Aligned_cols=35  Identities=23%  Similarity=0.337  Sum_probs=32.0

Q ss_pred             ccccCCCCCcccccCCCCCcCCChhHHHHH-hhhhcCC
Q psy4019           7 YPLLSSQKPYVCGEENCTKRYTDPSSLRKH-IKTVHGE   43 (109)
Q Consensus         7 ~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H-~~~h~~~   43 (109)
                      +++|++++||.|..  |++.|.....|..| ++.|+++
T Consensus         1 ~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            1 GSSGSSGHLYYCSQ--CHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CCSSSSSCEEECSS--SSCEEECHHHHHHHHHHHTCCC
T ss_pred             CCccCCCcCeECCC--CCcccCCHHHHHHHHHHHccCc
Confidence            46899999999999  99999999999999 8888864

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=1.9e-10  Score=57.03  Aligned_cols=43  Identities=19%  Similarity=0.102  Sum_probs=39.3

Q ss_pred             HHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCC
Q psy4019          35 KHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKS   89 (109)
Q Consensus        35 ~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~   89 (109)
                      .|+++|+++++|.|.            .|++.|.+...|..|+++|++..|+.+.
T Consensus         2 ~H~~~H~~~k~~~C~------------~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCS------------ECGKAFHRHTHLNEHRRIHTGYRPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECS------------SSCCEESSHHHHHHHHHHHTCCCSSCSS
T ss_pred             CCccccCCCcCeECC------------CCCCeeCChHHHHHHHHHcCCCCCCCCC
Confidence            367889999999999            9999999999999999999999998765

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=1.6e-10  Score=57.31  Aligned_cols=43  Identities=16%  Similarity=0.027  Sum_probs=39.4

Q ss_pred             HHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCC
Q psy4019          35 KHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKS   89 (109)
Q Consensus        35 ~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~   89 (109)
                      +|+++|+++++|.|.            .|++.|.....|..|+++|++..|+.+.
T Consensus         2 ~H~~~H~~~k~~~C~------------~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emp_A            2 SSGSSGTGVKPYMCN------------ECGKAFSVYSSLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCSSCCCSEECS------------SSCCEESCHHHHHHHHHHHHCCSCCSCC
T ss_pred             CcccccCCCcCeECC------------CCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            467889999999999            9999999999999999999999988765

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.76  E-value=6.5e-09  Score=48.59  Aligned_cols=35  Identities=29%  Similarity=0.444  Sum_probs=32.0

Q ss_pred             cccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCC
Q psy4019           8 PLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEH   44 (109)
Q Consensus         8 ~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~k   44 (109)
                      +.|+++++|.|..  |++.|.....|..|+++|++++
T Consensus         2 ~~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elq_A            2 SSGSSGKPFKCSL--CEYATRSKSNLKAHMNRHSTEK   36 (36)
T ss_dssp             CSSCCCCSEECSS--SSCEESCHHHHHHHHHHSSTTC
T ss_pred             CCCCCCCCccCCC--CCchhCCHHHHHHHHHHhccCC
Confidence            4689999999999  9999999999999999998764

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.76  E-value=2.8e-09  Score=53.21  Aligned_cols=42  Identities=24%  Similarity=0.331  Sum_probs=34.7

Q ss_pred             hhhhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCC
Q psy4019           3 LNLAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEH   44 (109)
Q Consensus         3 l~~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~k   44 (109)
                      +..|...|++++||.|.++.|++.|.....|..|+++|++++
T Consensus         6 ~~~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            6 SIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SGGGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHHHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            345667799999999962229999999999999999999874

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.75  E-value=1.8e-09  Score=58.60  Aligned_cols=43  Identities=14%  Similarity=0.034  Sum_probs=37.1

Q ss_pred             hcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccc-cccccCCCCCCCCCC
Q psy4019          40 VHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSA-KTASVSSPSIKSEVS   92 (109)
Q Consensus        40 h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~-~~~~~~~p~~~~~~~   92 (109)
                      ++++|||+|...          .|+++|.+.++|..|+ ++|++.+|+.+.+.+
T Consensus        22 ~sGEKPYkC~~~----------~CgKaFsr~s~L~~H~rriHTgEKP~~~~~~~   65 (73)
T 1x3c_A           22 YSPYRPYRCVHQ----------GCFAAFTIQQNLILHYQAVHKSDLPAFSAEVE   65 (73)
T ss_dssp             SCSSCSCBCCST----------TCCCBCSSHHHHHHHHHHHSSSCCCCCCCSCC
T ss_pred             ccCCCCeECCCC----------CcChhHcCHHHHHHHhhhhCCCCCCccccccc
Confidence            578999999611          5999999999999997 689999999988854

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.75  E-value=7.7e-09  Score=48.24  Aligned_cols=35  Identities=31%  Similarity=0.525  Sum_probs=32.1

Q ss_pred             cccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCC
Q psy4019           8 PLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEH   44 (109)
Q Consensus         8 ~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~k   44 (109)
                      .+|+++++|.|..  |++.|.....|..|+++|++++
T Consensus         2 ~~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elt_A            2 SSGSSGKPYKCPQ--CSYASAIKANLNVHLRKHTGEK   36 (36)
T ss_dssp             CCSCCCCSEECSS--SSCEESSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCCCCCCCC--CCcccCCHHHHHHHHHHccCCC
Confidence            3688999999999  9999999999999999998864

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=2.5e-10  Score=56.73  Aligned_cols=42  Identities=17%  Similarity=0.072  Sum_probs=38.5

Q ss_pred             HhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCC
Q psy4019          36 HIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKS   89 (109)
Q Consensus        36 H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~   89 (109)
                      |+++|+++++|.|.            .|++.|.+...|..|+++|++..|+.+.
T Consensus         3 h~~~h~~~k~~~C~------------~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ytm_A            3 SGSSGTGEKPYKCM------------ECGKAFGDNSSCTQHQRLHTGQRPSGPS   44 (46)
T ss_dssp             SCCCCSSCCSSSBT------------TTTBCCSSHHHHHHHHHHHHSCCCCCCC
T ss_pred             CCcCCCCCCCcCCC------------CCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            56789999999999            9999999999999999999999888764

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.75  E-value=2.9e-10  Score=56.40  Aligned_cols=42  Identities=17%  Similarity=0.053  Sum_probs=38.6

Q ss_pred             HhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCC
Q psy4019          36 HIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKS   89 (109)
Q Consensus        36 H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~   89 (109)
                      |+++|+++++|.|.            .|++.|.....|..|+++|++..|+.+.
T Consensus         3 h~~~H~~~k~~~C~------------~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2enc_A            3 SGSSGSGEKPFKCE------------ECGKGFYTNSQCYSHQRSHSGEKPSGPS   44 (46)
T ss_dssp             CSSCCCCCCSEECS------------SSCCEESSHHHHHHHHHHSCCSSCCSSC
T ss_pred             CCCCCCCCCCcCCC------------CCCCcCCChHHHHHHHHHhCCCCCCCCC
Confidence            57789999999999            9999999999999999999999988764

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.75  E-value=3.4e-10  Score=55.63  Aligned_cols=41  Identities=7%  Similarity=-0.174  Sum_probs=37.4

Q ss_pred             HhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCC
Q psy4019          36 HIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIK   88 (109)
Q Consensus        36 H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~   88 (109)
                      |+++|+++++|.|.            .|++.|.....|..|+++|++..|+.+
T Consensus         3 h~~~h~~~~~~~C~------------~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (44)
T 2eou_A            3 SGSSGAAKTTSECQ------------ECGKIFRHSSLLIEHQALHAGESGPSS   43 (44)
T ss_dssp             CSCSCSSSCCCCCT------------TTCCCCSSHHHHHHHHHHHTTSCCCCC
T ss_pred             CCCCCCCCcCeECC------------CCCcccCCHHHHHHHHHHHCCCCCCCC
Confidence            56788999999999            999999999999999999999988865

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.74  E-value=6.7e-09  Score=48.55  Aligned_cols=35  Identities=17%  Similarity=0.297  Sum_probs=31.9

Q ss_pred             cccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCC
Q psy4019           8 PLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEH   44 (109)
Q Consensus         8 ~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~k   44 (109)
                      +.|+++++|.|..  |++.|.....|..|+++|++++
T Consensus         2 ~~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elv_A            2 SSGSSGLLYDCHI--CERKFKNELDRDRHMLVHGDKW   36 (36)
T ss_dssp             CCSCCCCCEECSS--SCCEESSHHHHHHHHTTTSTTC
T ss_pred             CCCCCCCCeECCC--CCCccCCHHHHHHHHHHhcCCC
Confidence            3588999999999  9999999999999999998764

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.74  E-value=2.5e-10  Score=56.64  Aligned_cols=42  Identities=10%  Similarity=-0.211  Sum_probs=38.7

Q ss_pred             HhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCC
Q psy4019          36 HIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKS   89 (109)
Q Consensus        36 H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~   89 (109)
                      |+++|+++++|.|.            .|++.|.....|..|+++|++..|+.+.
T Consensus         3 H~~~H~~~~~~~C~------------~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yso_A            3 SGSSGSREKSHQCR------------ECGEIFFQYVSLIEHQVLHMGQKNSGPS   44 (46)
T ss_dssp             CSCCSSCCCCEECT------------TTCCEESSHHHHHHHHHHHSCCSCCCTT
T ss_pred             cccccCCCCCEEcc------------ccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            67789999999999            9999999999999999999999988765

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.74  E-value=1.4e-08  Score=47.32  Aligned_cols=34  Identities=24%  Similarity=0.388  Sum_probs=31.6

Q ss_pred             ccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCC
Q psy4019           9 LLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEH   44 (109)
Q Consensus         9 ~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~k   44 (109)
                      .|+++++|.|..  |++.|.....|..|+++|++++
T Consensus         3 ~h~~~~~~~C~~--C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            3 SGSSGKTHLCDM--CGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCCCCSSCBCTT--TCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCCCCCeecCc--CCCCcCchHHHHHHHHHhcCCC
Confidence            578999999999  9999999999999999999874

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.74  E-value=2.4e-09  Score=61.45  Aligned_cols=46  Identities=17%  Similarity=0.317  Sum_probs=42.1

Q ss_pred             chhhhccccCC-CCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           2 KLNLAYPLLSS-QKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         2 ~l~~H~~~h~~-~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      .|..|+++|++ +++|.|..  |++.|.....|..|+++|++++|+...
T Consensus        40 ~L~~H~~~h~~~~~~~~C~~--C~k~F~~~~~L~~H~~~h~~~kp~~~~   86 (98)
T 2gqj_A           40 GLKKHMEVCQKLQDALKCQH--CRKQFKSKAGLNYHTMAEHSAKPSDAE   86 (98)
T ss_dssp             HHHHHHHHHHHHHHHHSCSS--SCCCCSCHHHHHHHHHHHSCSCSSCCC
T ss_pred             HHHHHHHHHcCCCCCEECCC--CCCccCCHHHHHHHHHHHcCCCCCCCC
Confidence            57899999998 99999999  999999999999999999999986654

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=2.3e-10  Score=56.76  Aligned_cols=43  Identities=21%  Similarity=0.153  Sum_probs=39.2

Q ss_pred             HHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCC
Q psy4019          35 KHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKS   89 (109)
Q Consensus        35 ~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~   89 (109)
                      .|+++|+++++|.|.            .|++.|.+...|..|+++|++..|+.+.
T Consensus         2 ~h~~~H~~~~~~~C~------------~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en6_A            2 SSGSSGSGEKPYGCN------------ECGKTFSQKSILSAHQRTHTGEKPSGPS   44 (46)
T ss_dssp             CCSCCCCSSCCEEET------------TTTEEESSHHHHHHHHHHHSSCCCSSSC
T ss_pred             CCCCccCCCcCeECC------------CCCcccCchHHHHHHHHHcCCCCCCCCC
Confidence            367789999999999            9999999999999999999999998765

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=3.2e-10  Score=56.26  Aligned_cols=42  Identities=19%  Similarity=0.082  Sum_probs=38.5

Q ss_pred             HhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCC
Q psy4019          36 HIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKS   89 (109)
Q Consensus        36 H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~   89 (109)
                      |+++|+++++|.|.            .|++.|.+...|..|+++|++..|+.+.
T Consensus         3 h~~~h~~~k~~~C~------------~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em8_A            3 SGSSGSGEKPYKCV------------ECGKGYKRRLDLDFHQRVHTGEKLSGPS   44 (46)
T ss_dssp             CCCCCCSCCSEECS------------SSCCEESSHHHHHHHHHHHHCCCCCCSC
T ss_pred             CCCCCCCCCCeECc------------ccCchhCCHHHHHHHHHHHcCCCCCCCC
Confidence            56789999999999            9999999999999999999999988765

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.69  E-value=7.6e-09  Score=51.87  Aligned_cols=35  Identities=31%  Similarity=0.530  Sum_probs=29.8

Q ss_pred             ccCCCCCcccccCCCCCcCCChhHHHHHhh-hhcCCCC
Q psy4019           9 LLSSQKPYVCGEENCTKRYTDPSSLRKHIK-TVHGEHC   45 (109)
Q Consensus         9 ~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~-~h~~~kp   45 (109)
                      +|++++||.|..  |++.|.....|..|++ +|+++..
T Consensus         1 ~Ht~~kp~~C~~--C~k~F~~~~~L~~H~~~~H~~e~~   36 (48)
T 3iuf_A            1 GEDRDKPYACDI--CGKRYKNRPGLSYHYAHSHLAEEE   36 (48)
T ss_dssp             -CTTTSCEECTT--TCCEESSHHHHHHHHHHSSCC---
T ss_pred             CCCCCcCEECCC--cCcccCCHHHHHHHhhhhcCCCCC
Confidence            588999999999  9999999999999999 8988643

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=98.68  E-value=4.4e-09  Score=54.14  Aligned_cols=39  Identities=31%  Similarity=0.525  Sum_probs=35.6

Q ss_pred             chhhhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcC
Q psy4019           2 KLNLAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHG   42 (109)
Q Consensus         2 ~l~~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~   42 (109)
                      .|..|+++|+++++|.|..  |++.|.....|..|++.|.+
T Consensus        19 ~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C           19 YLNIHLRTHTGEKPYKCEF--CEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             HHHHHHHHHHCCCCEECSS--SSCEESSHHHHHHHHHHHC-
T ss_pred             HHHHHHHHcCCCCCcCCCC--CcchhCCHHHHHHHHHHhcC
Confidence            5788999999999999999  99999999999999998753

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.68  E-value=1.3e-09  Score=52.62  Aligned_cols=39  Identities=21%  Similarity=0.273  Sum_probs=35.2

Q ss_pred             hhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCC
Q psy4019          38 KTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIK   88 (109)
Q Consensus        38 ~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~   88 (109)
                      ++|+++++|.|.            .|++.|.....|..|+++|++..|+.+
T Consensus         3 ~~h~~~k~~~C~------------~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            3 SGSSGQRVYECQ------------ECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SSCCCCCCEECS------------SSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CccCCCCCeECC------------CCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            468899999999            999999999999999999999888753

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=5.2e-10  Score=55.23  Aligned_cols=41  Identities=10%  Similarity=0.040  Sum_probs=37.4

Q ss_pred             hhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCC
Q psy4019          37 IKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKS   89 (109)
Q Consensus        37 ~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~   89 (109)
                      .++|+++++|.|.            .|++.|.+...|..|+++|++..|+.++
T Consensus         4 ~~~h~~~k~~~C~------------~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (45)
T 2epu_A            4 GSSGTGQKPFECT------------HCGKSFRAKGNLVTHQRIHTGEKSGPSS   44 (45)
T ss_dssp             CCCCCSCCSEEET------------TTTEEESSHHHHHHHHTTTSSCCCCCSC
T ss_pred             CCCCCCCcCccCC------------CCCCccCChHHHHHHHHHhCCCCCCCCC
Confidence            4578899999999            9999999999999999999999998775

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.68  E-value=8.8e-10  Score=51.96  Aligned_cols=35  Identities=23%  Similarity=0.177  Sum_probs=32.0

Q ss_pred             HhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCcccccccccc
Q psy4019          36 HIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASV   82 (109)
Q Consensus        36 H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~   82 (109)
                      |+++|++++||.|+            .|++.|.+...|..|++++++
T Consensus         2 H~~~h~~~k~~~C~------------~C~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A            2 STRGSTGIKPFQCP------------DCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCT------------TTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCcCCCCCCccCC------------CCCcccCcHHHHHHHHHHhcc
Confidence            56789999999999            999999999999999998875

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.67  E-value=1.4e-09  Score=53.92  Aligned_cols=41  Identities=17%  Similarity=0.037  Sum_probs=37.6

Q ss_pred             hhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCC
Q psy4019          37 IKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKS   89 (109)
Q Consensus        37 ~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~   89 (109)
                      +++|+++++|.|.            .|++.|.+...|..|+++|+...|+.+.
T Consensus         4 ~~~h~~~k~~~C~------------~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            4 GSSGHGERGHRCS------------DCGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSCCCS------------SSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCCCCCcCCC------------CCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            4578899999999            9999999999999999999999998875

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.64  E-value=2.7e-08  Score=46.37  Aligned_cols=34  Identities=29%  Similarity=0.434  Sum_probs=31.2

Q ss_pred             ccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCC
Q psy4019           9 LLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEH   44 (109)
Q Consensus         9 ~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~k   44 (109)
                      .|.++++|.|..  |++.|.....|..|+++|++++
T Consensus         3 ~~~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A            3 SGSSGKIFTCEY--CNKVFKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             TTSCCCCEECTT--TCCEESSHHHHHHHHHHHCCCC
T ss_pred             CCCCCCCEECCC--CCceeCCHHHHHHHHHHhCCCC
Confidence            478899999999  9999999999999999998864

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.63  E-value=2.1e-09  Score=52.54  Aligned_cols=40  Identities=8%  Similarity=0.001  Sum_probs=36.5

Q ss_pred             hhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCC
Q psy4019          38 KTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKS   89 (109)
Q Consensus        38 ~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~   89 (109)
                      +.|+++++|.|.            .|++.|.+...|..|+++|++..|+.+.
T Consensus         3 ~~h~~~k~~~C~------------~C~k~f~~~~~L~~H~~~H~~~k~~~C~   42 (43)
T 2yrm_A            3 SGSSGNGAFFCN------------ECDCRFSEEASLKRHTLQTHSDKSGPSS   42 (43)
T ss_dssp             SCCSSSCCBCCS------------SSCCCBSSHHHHHHHHHHHTCTTCSSSC
T ss_pred             cCcCCCCCEECC------------CCCCeeCChHHHHHHHHhhCCCCCccCC
Confidence            468899999999            9999999999999999999999998764

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=98.63  E-value=1.3e-08  Score=52.92  Aligned_cols=40  Identities=33%  Similarity=0.649  Sum_probs=36.3

Q ss_pred             chhhhccccCCCCCcccccCCCCCcCCChhHHHHHh-hhhcCC
Q psy4019           2 KLNLAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHI-KTVHGE   43 (109)
Q Consensus         2 ~l~~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~-~~h~~~   43 (109)
                      .|..|+++|+++++|.|..  |++.|.....|..|+ +.|.++
T Consensus        17 ~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A           17 HLKRHYRSHTNEKPYPCGL--CNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             HHHHHHHTTTSSCSEECTT--TCCEESSHHHHHHHHTTTSCCS
T ss_pred             HHHHHHHHhCCCCCccCCC--CCCccCCHHHHHHHHHHHcCCc
Confidence            5788999999999999999  999999999999996 678764

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.63  E-value=1.5e-09  Score=53.73  Aligned_cols=41  Identities=17%  Similarity=0.117  Sum_probs=37.4

Q ss_pred             hhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCC
Q psy4019          37 IKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKS   89 (109)
Q Consensus        37 ~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~   89 (109)
                      +++|+++++|.|.            .|++.|.+...|..|+++|++..|+.+.
T Consensus         4 ~~~h~~~~~~~C~------------~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep0_A            4 GSSGTGEKPYKCD------------VCHKSFRYGSSLTVHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCSSTTCCSEECS------------SSCCEESSHHHHHHHHTTTSSSCCCSCC
T ss_pred             CCCCCCCCCeeCc------------ccCcccCChHHHHHHHHHhCCCCCCCCC
Confidence            4678999999999            9999999999999999999999988764

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.63  E-value=1.4e-08  Score=48.23  Aligned_cols=31  Identities=26%  Similarity=0.564  Sum_probs=28.7

Q ss_pred             cCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019          10 LSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus        10 h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      +.+++||.|..  |+++|....+|.+|+       ||.|.
T Consensus         3 ~~gekp~~C~~--CgK~F~~~s~L~~H~-------py~C~   33 (36)
T 1fv5_A            3 LLKPARFMCLP--CGIAFSSPSTLEAHQ-------AYYCS   33 (36)
T ss_dssp             SSSCCCCEETT--TTEECSCHHHHHHHH-------HHTST
T ss_pred             CCCccCeECCC--CCCccCCHhHccCcC-------CeECc
Confidence            57899999999  999999999999998       78887

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.62  E-value=2.4e-08  Score=47.03  Aligned_cols=36  Identities=31%  Similarity=0.508  Sum_probs=31.2

Q ss_pred             ccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCC
Q psy4019           9 LLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEH   44 (109)
Q Consensus         9 ~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~k   44 (109)
                      .|+++++|.|..+.|++.|.....|..|+++|++++
T Consensus         2 ~~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            2 DPGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             CSSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            478999999983239999999999999999999864

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.61  E-value=1.8e-09  Score=53.44  Aligned_cols=41  Identities=27%  Similarity=0.097  Sum_probs=37.4

Q ss_pred             hhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCC
Q psy4019          37 IKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKS   89 (109)
Q Consensus        37 ~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~   89 (109)
                      +++|+++++|.|.            .|++.|.+...|..|+++|++..|+.+.
T Consensus         4 ~~~h~~~k~~~C~------------~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytt_A            4 GSSGEGEKPYQCS------------ECGKSFSGSYRLTQHWITHTREKPSGPS   44 (46)
T ss_dssp             SSSCSCCCTTCCS------------SSCCCCSSHHHHHHHHTHHHHCCCCSCC
T ss_pred             CCCCCCCCCeeCC------------CCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            4678999999999            9999999999999999999999988765

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.57  E-value=1.2e-09  Score=51.50  Aligned_cols=36  Identities=14%  Similarity=0.026  Sum_probs=32.3

Q ss_pred             hhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCC
Q psy4019          38 KTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSP   85 (109)
Q Consensus        38 ~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p   85 (109)
                      ++|+++++|.|.            .|++.|.+...|..|+++|++..|
T Consensus         2 ~~h~~~k~~~C~------------~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            2 SSGSSGRSYSCP------------VCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCEET------------TTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCCcCCC------------CCCCccCCHHHHHHHHHHHcCCCC
Confidence            568899999999            999999999999999999987653

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.56  E-value=4.7e-09  Score=50.09  Aligned_cols=37  Identities=3%  Similarity=0.005  Sum_probs=33.1

Q ss_pred             hcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCC
Q psy4019          40 VHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIK   88 (109)
Q Consensus        40 h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~   88 (109)
                      |+++++|.|.            .|++.|.....|..|+++|++..|+.+
T Consensus         1 h~~~k~~~C~------------~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCS------------FCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             -CCSSSEECT------------TTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCCCceECC------------CCCcccCCHHHHHHHHHHcCCCcccee
Confidence            5688999999            999999999999999999999888764

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=98.54  E-value=1.4e-08  Score=54.79  Aligned_cols=38  Identities=26%  Similarity=0.584  Sum_probs=35.3

Q ss_pred             chhhhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhc
Q psy4019           2 KLNLAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVH   41 (109)
Q Consensus         2 ~l~~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~   41 (109)
                      .|..|+++|.++++|.|..  |++.|.....|..|+++|+
T Consensus        36 ~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           36 ELTRHIRIHTGQKPFQCRI--CMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             HHHHHHHHHHCCCCEECTT--TCCEESCHHHHHHHHTTCC
T ss_pred             HHHHHHHhhCCCCCeECCC--CCchhCCHHHHHHHHHhcC
Confidence            5788999999999999999  9999999999999998874

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.54  E-value=3.6e-09  Score=53.12  Aligned_cols=36  Identities=8%  Similarity=0.078  Sum_probs=29.4

Q ss_pred             hhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCcccccc-ccccCCCC
Q psy4019          39 TVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAK-TASVSSPS   86 (109)
Q Consensus        39 ~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~-~~~~~~p~   86 (109)
                      +|++++||.|.            .|++.|.....|..|++ +|++....
T Consensus         1 ~Ht~~kp~~C~------------~C~k~F~~~~~L~~H~~~~H~~e~~~   37 (48)
T 3iuf_A            1 GEDRDKPYACD------------ICGKRYKNRPGLSYHYAHSHLAEEEG   37 (48)
T ss_dssp             -CTTTSCEECT------------TTCCEESSHHHHHHHHHHSSCC----
T ss_pred             CCCCCcCEECC------------CcCcccCCHHHHHHHhhhhcCCCCCC
Confidence            47899999999            99999999999999999 99876554

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.52  E-value=5e-09  Score=48.65  Aligned_cols=35  Identities=6%  Similarity=0.039  Sum_probs=31.1

Q ss_pred             hhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCC
Q psy4019          39 TVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSP   85 (109)
Q Consensus        39 ~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p   85 (109)
                      +|+++++|.|.            .|++.|.....|..|+++|++..|
T Consensus         1 ~H~~~k~~~C~------------~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            1 GSSGKRPFVCR------------ICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CCSCCSCEECS------------SSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCCcCeeCC------------CCCcccCCHHHHHHHHHHcCCCCC
Confidence            36789999999            999999999999999999987653

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.49  E-value=4.9e-09  Score=48.57  Aligned_cols=35  Identities=11%  Similarity=-0.013  Sum_probs=30.9

Q ss_pred             hhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCC
Q psy4019          39 TVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSP   85 (109)
Q Consensus        39 ~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p   85 (109)
                      +|+++++|.|.            .|++.|.+...|..|+++|++..|
T Consensus         1 ~h~~~k~~~C~------------~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            1 GSSGSSGYVCA------------LCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCCSEECS------------SSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCCeECC------------CCcchhCCHHHHHHHHHHHcCCCC
Confidence            36789999999            999999999999999999887643

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.49  E-value=1.4e-07  Score=50.62  Aligned_cols=39  Identities=26%  Similarity=0.312  Sum_probs=34.1

Q ss_pred             cccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019           8 PLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus         8 ~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      ..+.+++||.|..  |++.|.....|..|+++|+++. ..+.
T Consensus         6 ~~~~~ekpy~C~~--CgK~F~~~s~L~~H~r~Htg~~-~~~~   44 (66)
T 2epp_A            6 SGLREAGILPCGL--CGKVFTDANRLRQHEAQHGVTS-LQLG   44 (66)
T ss_dssp             CSCCCCCCCCCTT--TCCCCSCHHHHHHHHHHHTTTS-CCCC
T ss_pred             CCCCCccCcCCCC--CCCccCCHHHHHhhhhhhCCCc-cccc
Confidence            4588899999999  9999999999999999999864 3454

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.48  E-value=1.3e-07  Score=42.67  Aligned_cols=30  Identities=27%  Similarity=0.654  Sum_probs=27.0

Q ss_pred             CCCcccc--cCCCCCcCCChhHHHHHhhhhcCCC
Q psy4019          13 QKPYVCG--EENCTKRYTDPSSLRKHIKTVHGEH   44 (109)
Q Consensus        13 ~~p~~C~--~~~C~k~f~~~~~l~~H~~~h~~~k   44 (109)
                      ++||.|.  .  |++.|.....|..|+++|++++
T Consensus         1 ek~~~C~~~~--C~k~f~~~~~L~~H~~~H~~~~   32 (32)
T 1zfd_A            1 DRPYSCDHPG--CDKAFVRNHDLIRHKKSHQEKA   32 (32)
T ss_dssp             CCSBCCCCTT--CCCCBSSSHHHHHHHGGGTCCC
T ss_pred             CCCCcCcCCC--CCCccCCHHHHHHHHHHccCCC
Confidence            4789998  7  9999999999999999999864

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.48  E-value=5.8e-09  Score=51.31  Aligned_cols=40  Identities=20%  Similarity=0.210  Sum_probs=36.5

Q ss_pred             hhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCCC
Q psy4019          39 TVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKSE   90 (109)
Q Consensus        39 ~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~~   90 (109)
                      .|+++++|.|.            .|++.|.+...|..|+++|+...++.+..
T Consensus         4 ~h~~~k~~~C~------------~C~k~f~~~~~l~~H~~~H~~~~~~~C~~   43 (45)
T 2epq_A            4 GSSGEKPYSCP------------VCGLRFKRKDRMSYHVRSHDGSVGKSGPS   43 (45)
T ss_dssp             CCSSCCSSEET------------TTTEECSCHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CcCCCCCCcCC------------CCCcccCCHHHHHHHHHHccCCCCCCCcC
Confidence            57899999999            99999999999999999999999887654

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.48  E-value=4.7e-09  Score=50.48  Aligned_cols=32  Identities=6%  Similarity=-0.140  Sum_probs=28.9

Q ss_pred             hcCCCCcccCCCCCCCCCCCCCC--CCCcCCCCCCccccccccccC
Q psy4019          40 VHGEHCYANKKHKGMPSKDKDGL--GGASPSRSDDMPLSAKTASVS   83 (109)
Q Consensus        40 h~~~kp~~C~~~~~~~~~~~~~~--C~~~f~~~~~l~~H~~~~~~~   83 (109)
                      +.+++||+|.            .  |+++|.+...|..|+++|++.
T Consensus         4 ~~gekp~~C~------------~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            4 GSSGILLKCP------------TDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             SSCCCCEECS------------SSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCC------------CCCCCCccCCHHHHHHHHHhcCCC
Confidence            5789999998            5  999999999999999999864

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.47  E-value=4.2e-09  Score=48.20  Aligned_cols=31  Identities=32%  Similarity=0.579  Sum_probs=27.6

Q ss_pred             CCcccccCCCCCcCCChhHHHHHhhhhcCCCCc
Q psy4019          14 KPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCY   46 (109)
Q Consensus        14 ~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~   46 (109)
                      +||.|..  |++.|.....|..|+++|++++||
T Consensus         1 kp~~C~~--C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPA--CPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSS--SCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCC--CCcccCCHHHHHHHHHHHccCCCC
Confidence            4789998  999999999999999999998886

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.45  E-value=3.3e-08  Score=52.52  Aligned_cols=41  Identities=15%  Similarity=0.225  Sum_probs=36.8

Q ss_pred             chhhhccccCCCCCcccc-cCCCCCcCCChhHHHHHhhhhcCCCC
Q psy4019           2 KLNLAYPLLSSQKPYVCG-EENCTKRYTDPSSLRKHIKTVHGEHC   45 (109)
Q Consensus         2 ~l~~H~~~h~~~~p~~C~-~~~C~k~f~~~~~l~~H~~~h~~~kp   45 (109)
                      .|..|+++ ++++||.|. .  |++.|.....|..|+++|...++
T Consensus        24 ~L~~H~~~-~~~~p~~C~~~--C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A           24 TIQSHQYQ-CPRLPVACPNQ--CGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             HHHHHHHH-CSSSEEECTTC--CSCCEEETTTHHHHHHTTSSSCC
T ss_pred             HHHHHHHH-cCCcCccCCcc--cCcccccHHHHHHHHHhhcccCc
Confidence            57889998 999999999 9  99999999999999999876654

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.45  E-value=1.6e-07  Score=42.11  Aligned_cols=29  Identities=38%  Similarity=0.887  Sum_probs=26.2

Q ss_pred             CCcccc--cCCCCCcCCChhHHHHHhhhhcCCC
Q psy4019          14 KPYVCG--EENCTKRYTDPSSLRKHIKTVHGEH   44 (109)
Q Consensus        14 ~p~~C~--~~~C~k~f~~~~~l~~H~~~h~~~k   44 (109)
                      +||.|.  .  |++.|.....|..|+++|++++
T Consensus         1 kp~~C~~~~--C~k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            1 RPFMCTWSY--CGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTT--CCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CCcCCcCCC--CCcccCCHhHHHHHHHHhcCCC
Confidence            479997  7  9999999999999999999864

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=98.41  E-value=1.2e-07  Score=50.06  Aligned_cols=39  Identities=26%  Similarity=0.482  Sum_probs=35.1

Q ss_pred             chhhhccc-c-CCCCCcccccCCCCCcCCChhHHHHHhhhhcC
Q psy4019           2 KLNLAYPL-L-SSQKPYVCGEENCTKRYTDPSSLRKHIKTVHG   42 (109)
Q Consensus         2 ~l~~H~~~-h-~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~   42 (109)
                      .|..|+++ | .++++|.|..  |++.|.....|..|++.+.+
T Consensus        25 ~l~~H~~~~H~~~~~~~~C~~--C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A           25 NFCRHYVTSHKRNVKVYPCPF--CFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             HHHHHHHHHSSSSCCCEECTT--TCCEESCHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHcCCCCcCeECCC--CCCccCCHHHHHHHHHHHcC
Confidence            57889987 7 6899999999  99999999999999998765

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.41  E-value=1.6e-07  Score=41.41  Aligned_cols=30  Identities=33%  Similarity=0.805  Sum_probs=27.3

Q ss_pred             CCCcccccCCCCCcCCChhHHHHHhhhhcCCC
Q psy4019          13 QKPYVCGEENCTKRYTDPSSLRKHIKTVHGEH   44 (109)
Q Consensus        13 ~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~k   44 (109)
                      +++|.|..  |++.|.....|..|+++|++++
T Consensus         1 ~k~~~C~~--C~~~f~~~~~l~~H~~~h~~~k   30 (30)
T 2m0d_A            1 MKPYQCDY--CGRSFSDPTSKMRHLETHDTDK   30 (30)
T ss_dssp             CCCEECTT--TCCEESCHHHHHHHHHTTCCCC
T ss_pred             CcCccCCC--CCcccCCHHHHHHHHHHhccCC
Confidence            47899999  9999999999999999998764

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.41  E-value=5.6e-08  Score=53.10  Aligned_cols=46  Identities=22%  Similarity=0.309  Sum_probs=39.5

Q ss_pred             chhhhccccCC---CCCcccccCCCCCcCCChhHHHHHh-hhhcCCCCcccC
Q psy4019           2 KLNLAYPLLSS---QKPYVCGEENCTKRYTDPSSLRKHI-KTVHGEHCYANK   49 (109)
Q Consensus         2 ~l~~H~~~h~~---~~p~~C~~~~C~k~f~~~~~l~~H~-~~h~~~kp~~C~   49 (109)
                      .|..|+++|.+   +++|.|..  |++.|.....|..|+ +.|.++++....
T Consensus        22 ~L~~H~~~h~~~~~~~~~~C~~--C~k~f~~~~~L~~H~~~~H~~~~~~~~~   71 (78)
T 2d9h_A           22 SLNWHQRKHAETVAALRFPCEF--CGKRFEKPDSVAAHRSKSHPALLLAPQE   71 (78)
T ss_dssp             HHHHHHHHHHHHTTTCCEECTT--TCCEESSHHHHHHHHHHTSTTTSSCCSS
T ss_pred             HHHHHHHHhhccCCCcccCCCC--CCchhCCHHHHHHHHHHhCCCCCCCccc
Confidence            57889999986   89999999  999999999999999 467777776544

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.41  E-value=5.6e-08  Score=52.28  Aligned_cols=39  Identities=23%  Similarity=0.545  Sum_probs=33.9

Q ss_pred             chhhhccccCCCCCcccccCCCCCcCCChhHHHHHhhhh
Q psy4019           2 KLNLAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTV   40 (109)
Q Consensus         2 ~l~~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h   40 (109)
                      .|..|+++|+++++|.|.++.|++.|.....|..|+++|
T Consensus        34 ~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           34 HLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             HHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             HHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            578899999999999995323999999999999998765

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.41  E-value=3.2e-07  Score=40.19  Aligned_cols=29  Identities=24%  Similarity=0.723  Sum_probs=26.4

Q ss_pred             CCcccccCCCCCcCCChhHHHHHhhhhcCCC
Q psy4019          14 KPYVCGEENCTKRYTDPSSLRKHIKTVHGEH   44 (109)
Q Consensus        14 ~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~k   44 (109)
                      +||.|..  |++.|.....|..|+++|++++
T Consensus         1 k~~~C~~--C~~~f~~~~~l~~H~~~h~~~k   29 (29)
T 1ard_A            1 RSFVCEV--CTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCCBCTT--TCCBCSSHHHHHHHHHHHSCCC
T ss_pred             CCeECCC--CCcccCCHHHHHHHHHHhcCCC
Confidence            4799999  9999999999999999998764

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.39  E-value=3e-07  Score=40.16  Aligned_cols=29  Identities=24%  Similarity=0.550  Sum_probs=26.4

Q ss_pred             CCcccccCCCCCcCCChhHHHHHhhhhcCCC
Q psy4019          14 KPYVCGEENCTKRYTDPSSLRKHIKTVHGEH   44 (109)
Q Consensus        14 ~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~k   44 (109)
                      +||.|..  |++.|.....|..|+++|++++
T Consensus         1 k~~~C~~--C~~~f~~~~~l~~H~~~h~~~~   29 (29)
T 2m0e_A            1 KEHKCPH--CDKKFNQVGNLKAHLKIHIADG   29 (29)
T ss_dssp             CCCCCSS--CCCCCCTTTHHHHHHHHHHSCC
T ss_pred             CCCcCCC--CCcccCCHHHHHHHHHHhccCC
Confidence            5799999  9999999999999999998864

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.38  E-value=4.2e-08  Score=44.74  Aligned_cols=31  Identities=23%  Similarity=0.097  Sum_probs=28.2

Q ss_pred             CCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCC
Q psy4019          44 HCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPS   86 (109)
Q Consensus        44 kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~   86 (109)
                      +||.|.            .|++.|.+...|..|+++|++..|+
T Consensus         1 kp~~C~------------~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACP------------ACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSS------------SSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCC------------CCCcccCCHHHHHHHHHHHccCCCC
Confidence            589999            9999999999999999999987764

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.38  E-value=2.1e-07  Score=40.83  Aligned_cols=29  Identities=28%  Similarity=0.567  Sum_probs=26.5

Q ss_pred             CCcccccCCCCCcCCChhHHHHHhhhhcCCC
Q psy4019          14 KPYVCGEENCTKRYTDPSSLRKHIKTVHGEH   44 (109)
Q Consensus        14 ~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~k   44 (109)
                      +||.|..  |++.|.....|..|+++|++++
T Consensus         1 k~~~C~~--C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 1rik_A            1 YKFACPE--CPKRFMRSDHLTLHILLHENKK   29 (29)
T ss_dssp             CCEECSS--SSCEESCSHHHHHHHTGGGSCC
T ss_pred             CCccCCC--CCchhCCHHHHHHHHHHhcCCC
Confidence            5799999  9999999999999999998864

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.38  E-value=1.6e-08  Score=50.15  Aligned_cols=44  Identities=27%  Similarity=0.152  Sum_probs=37.3

Q ss_pred             HhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCC
Q psy4019          36 HIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKS   89 (109)
Q Consensus        36 H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~   89 (109)
                      |.++|+++++|.|...          .|++.|.+...|..|+++|++..|+.+.
T Consensus         3 ~~~~H~~~k~~~C~~~----------~C~k~f~~~~~L~~H~~~H~~~k~~~C~   46 (48)
T 2ent_A            3 SGSSGTGEKPFACTWP----------GCGWRFSRSDELSRHRRSHSGVKPSGPS   46 (48)
T ss_dssp             CCCSSCCCCCEECCSS----------SCCCEESSHHHHHHHHTTSCCCCSCSSC
T ss_pred             CCCCcCCCCCeECCCC----------CCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            3467899999999611          5999999999999999999999988764

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.37  E-value=5.9e-09  Score=49.25  Aligned_cols=33  Identities=12%  Similarity=-0.014  Sum_probs=29.7

Q ss_pred             hhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCcccc-cccccc
Q psy4019          38 KTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLS-AKTASV   82 (109)
Q Consensus        38 ~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H-~~~~~~   82 (109)
                      ++|++++||+|.            .|++.|.....|..| +++|++
T Consensus         2 ~~H~~~k~~~C~------------~C~k~f~~~~~L~~H~~~~H~~   35 (37)
T 2elm_A            2 SSGSSGHLYYCS------------QCHYSSITKNCLKRHVIQKHSN   35 (37)
T ss_dssp             CSSSSSCEEECS------------SSSCEEECHHHHHHHHHHHTCC
T ss_pred             CccCCCcCeECC------------CCCcccCCHHHHHHHHHHHccC
Confidence            568899999999            999999999999999 888764

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.36  E-value=4.8e-07  Score=39.80  Aligned_cols=30  Identities=43%  Similarity=0.701  Sum_probs=27.0

Q ss_pred             CCcccccCCCCCcCCChhHHHHHhhhhcCCCC
Q psy4019          14 KPYVCGEENCTKRYTDPSSLRKHIKTVHGEHC   45 (109)
Q Consensus        14 ~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp   45 (109)
                      ++|.|..  |++.|.....|..|+++|.++++
T Consensus         1 k~~~C~~--C~k~f~~~~~l~~H~~~h~~~~~   30 (30)
T 1klr_A            1 KTYQCQY--CEFRSADSSNLKTHIKTKHSKEK   30 (30)
T ss_dssp             CCCCCSS--SSCCCSCSHHHHHHHHHHTSSCC
T ss_pred             CCccCCC--CCCccCCHHHHHHHHHHHccCCC
Confidence            4799999  99999999999999999988753

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.36  E-value=1.4e-08  Score=47.97  Aligned_cols=35  Identities=6%  Similarity=0.118  Sum_probs=31.2

Q ss_pred             hcCCCCcccCCCCCCCCCCCCCC--CCCcCCCCCCccccccccccCCCC
Q psy4019          40 VHGEHCYANKKHKGMPSKDKDGL--GGASPSRSDDMPLSAKTASVSSPS   86 (109)
Q Consensus        40 h~~~kp~~C~~~~~~~~~~~~~~--C~~~f~~~~~l~~H~~~~~~~~p~   86 (109)
                      |+++++|.|.            .  |++.|.+...|..|+++|++..|+
T Consensus         1 H~~~k~~~C~------------~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCT------------APGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECC------------CTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCCcceECC------------CCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            5688999998            5  999999999999999999987765

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.35  E-value=1.2e-08  Score=50.87  Aligned_cols=39  Identities=5%  Similarity=-0.120  Sum_probs=32.0

Q ss_pred             HHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccC
Q psy4019          35 KHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVS   83 (109)
Q Consensus        35 ~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~   83 (109)
                      .|...|++++||.|...          .|++.|.+...|..|+++|++.
T Consensus         8 ~~~~~H~~~k~~~C~~~----------~C~k~F~~~~~L~~H~~~H~~e   46 (47)
T 1ncs_A            8 DKYVKEMPDKTFECLFP----------GCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             GGSCEEETTTEEECCCT----------TCCCEECSSSSHHHHHHHHTTT
T ss_pred             HHHhccCCCCCeECCCC----------CCCCccCCHHHHHHHHHHccCC
Confidence            34456899999999411          6999999999999999998764

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.34  E-value=2.8e-07  Score=40.34  Aligned_cols=29  Identities=34%  Similarity=0.830  Sum_probs=26.6

Q ss_pred             CCcccccCCCCCcCCChhHHHHHhhhhcCCC
Q psy4019          14 KPYVCGEENCTKRYTDPSSLRKHIKTVHGEH   44 (109)
Q Consensus        14 ~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~k   44 (109)
                      ++|.|..  |++.|.....|..|+++|++++
T Consensus         1 ~~~~C~~--C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            1 GPLKCRE--CGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CCEECTT--TSCEESCHHHHHHHHHHHHTCC
T ss_pred             CCccCCC--CCCccCChhHHHHHHHHhcCCC
Confidence            4799999  9999999999999999998864

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.31  E-value=2.1e-08  Score=47.08  Aligned_cols=34  Identities=3%  Similarity=-0.145  Sum_probs=30.1

Q ss_pred             hhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCC-CCccccccccccC
Q psy4019          38 KTVHGEHCYANKKHKGMPSKDKDGLGGASPSRS-DDMPLSAKTASVS   83 (109)
Q Consensus        38 ~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~-~~l~~H~~~~~~~   83 (109)
                      ++|+++++|.|.            .|++.|.+. ..|..|+++|++.
T Consensus         2 ~~h~~~k~~~C~------------~C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            2 SSGSSGRAMKCP------------YCDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             CSCCCCCCEECS------------SSSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCCCCCCeECC------------CCChhhccCHHHHHHHHHhcCCC
Confidence            468899999999            999999998 9999999988753

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.30  E-value=3e-08  Score=46.22  Aligned_cols=33  Identities=6%  Similarity=-0.131  Sum_probs=29.7

Q ss_pred             hhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccC
Q psy4019          39 TVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVS   83 (109)
Q Consensus        39 ~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~   83 (109)
                      .|+++++|.|.            .|++.|.+...|..|+++|++.
T Consensus         3 ~h~~~k~~~C~------------~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            3 SGSSGLLYDCH------------ICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             CSCCCCCEECS------------SSCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCCCCeECC------------CCCCccCCHHHHHHHHHHhcCC
Confidence            47789999999            9999999999999999998754

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.26  E-value=7.1e-08  Score=47.99  Aligned_cols=40  Identities=10%  Similarity=-0.036  Sum_probs=35.8

Q ss_pred             hhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCCC
Q psy4019          39 TVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKSE   90 (109)
Q Consensus        39 ~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~~   90 (109)
                      .+.++++|.|.            .|++.|.....|..|+++|+...|+.+..
T Consensus         6 ~~~~~k~~~C~------------~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (48)
T 2epr_A            6 SGRTRKQVACE------------ICGKIFRDVYHLNRHKLSHSGEKPYSSGP   45 (48)
T ss_dssp             CCCCCCSEEET------------TTTEEESSHHHHHHHGGGSCSCCCCCSCC
T ss_pred             CCCCCcCeeCC------------CCCcccCCHHHHHHHHHhcCCCCCccCCC
Confidence            35678999999            99999999999999999999999987754

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=98.26  E-value=5.5e-07  Score=53.54  Aligned_cols=38  Identities=24%  Similarity=0.378  Sum_probs=35.2

Q ss_pred             chhhhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCC
Q psy4019           2 KLNLAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGE   43 (109)
Q Consensus         2 ~l~~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~   43 (109)
                      +|..|+++|  ++||.|..  |++.|.....|..|++.|++.
T Consensus        89 ~l~~H~~~H--~~~~~C~~--C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           89 SLKQHIRYT--EHTKVCPV--CKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             HHHHHHHHT--CCCCBCTT--TCCBCSSHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHC--CCCCCCCC--CCcccCCHHHHHHHHHHHCCc
Confidence            578899999  88999999  999999999999999999875

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.25  E-value=5.5e-08  Score=44.67  Aligned_cols=31  Identities=13%  Similarity=-0.019  Sum_probs=28.6

Q ss_pred             CCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCC
Q psy4019          44 HCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPS   86 (109)
Q Consensus        44 kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~   86 (109)
                      +||.|.            .|++.|.....|..|+++|++..|+
T Consensus         1 kp~~C~------------~C~k~F~~~~~L~~H~~~H~~~~~~   31 (33)
T 1rim_A            1 YKFACP------------ECPKRFMRSDHLSKHITLHELLGEE   31 (33)
T ss_dssp             CCCCCS------------SSCCCCSSHHHHHHHHHHHTTTCCC
T ss_pred             CcccCC------------CCCchhCCHHHHHHHHHHhCCCCCC
Confidence            589999            9999999999999999999988776

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.25  E-value=1.7e-07  Score=50.38  Aligned_cols=35  Identities=11%  Similarity=0.082  Sum_probs=31.4

Q ss_pred             hcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCC
Q psy4019          40 VHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPS   86 (109)
Q Consensus        40 h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~   86 (109)
                      +.+++||+|.            .|++.|.+...|..|+++|+.....
T Consensus         8 ~~~ekpy~C~------------~CgK~F~~~s~L~~H~r~Htg~~~~   42 (66)
T 2epp_A            8 LREAGILPCG------------LCGKVFTDANRLRQHEAQHGVTSLQ   42 (66)
T ss_dssp             CCCCCCCCCT------------TTCCCCSCHHHHHHHHHHHTTTSCC
T ss_pred             CCCccCcCCC------------CCCCccCCHHHHHhhhhhhCCCccc
Confidence            5678999999            9999999999999999999986544

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.24  E-value=5.5e-07  Score=39.21  Aligned_cols=28  Identities=29%  Similarity=0.738  Sum_probs=25.2

Q ss_pred             CCCcccccCCCCCcCCChhHHHHHhhhhcC
Q psy4019          13 QKPYVCGEENCTKRYTDPSSLRKHIKTVHG   42 (109)
Q Consensus        13 ~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~   42 (109)
                      +++|.|..  |++.|.....|..|+++|++
T Consensus         1 ~k~~~C~~--C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            1 MRPYSCSV--CGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CCSEECSS--SCCEESCHHHHHHHHTTSCC
T ss_pred             CcCccCCC--CCcccCCHHHHHHHHHhcCC
Confidence            46899999  99999999999999988764

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.23  E-value=3.8e-08  Score=45.87  Aligned_cols=33  Identities=6%  Similarity=0.033  Sum_probs=29.7

Q ss_pred             hhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccC
Q psy4019          39 TVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVS   83 (109)
Q Consensus        39 ~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~   83 (109)
                      .|.+++||+|.            .|++.|.....|..|+++|++.
T Consensus         3 ~h~~~k~~~C~------------~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            3 SGSSGKPFKCS------------LCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             SSCCCCSEECS------------SSSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCCCCccCC------------CCCchhCCHHHHHHHHHHhccC
Confidence            57889999999            9999999999999999988754

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.55  E-value=1.4e-07  Score=41.57  Aligned_cols=29  Identities=41%  Similarity=0.721  Sum_probs=25.5

Q ss_pred             CCcccccCCCCCcCCChhHHHHHhhhhcCCC
Q psy4019          14 KPYVCGEENCTKRYTDPSSLRKHIKTVHGEH   44 (109)
Q Consensus        14 ~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~k   44 (109)
                      +||.|..  |++.|.....|..|+++|++++
T Consensus         1 k~~~C~~--C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2lvt_A            1 KPCQCVM--CGKAFTQASSLIAHVRQHTGEK   29 (29)
Confidence            4789999  9999999999999999988764

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.55  E-value=1.4e-07  Score=41.73  Aligned_cols=30  Identities=40%  Similarity=1.016  Sum_probs=26.2

Q ss_pred             CCCcccccCCCCCcCCChhHHHHHhhhhcCCC
Q psy4019          13 QKPYVCGEENCTKRYTDPSSLRKHIKTVHGEH   44 (109)
Q Consensus        13 ~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~k   44 (109)
                      ++||.|..  |++.|.....|..|+++|++++
T Consensus         1 ~k~~~C~~--C~k~f~~~~~l~~H~~~h~~~k   30 (30)
T 2lvr_A            1 MKPYVCIH--CQRQFADPGALQRHVRIHTGEK   30 (30)
Confidence            36899999  9999999999999999988753

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.23  E-value=6.4e-08  Score=44.95  Aligned_cols=33  Identities=3%  Similarity=-0.060  Sum_probs=29.6

Q ss_pred             hhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccC
Q psy4019          39 TVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVS   83 (109)
Q Consensus        39 ~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~   83 (109)
                      .|.++++|.|.            .|++.|.....|..|+++|++.
T Consensus         3 ~h~~~~~~~C~------------~C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A            3 SGSSGKTHLCD------------MCGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             CCCCCSSCBCT------------TTCCBCSSHHHHHHHHHHHSSC
T ss_pred             CCCCCCCeecC------------cCCCCcCchHHHHHHHHHhcCC
Confidence            46789999999            9999999999999999988764

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.23  E-value=9.8e-07  Score=37.96  Aligned_cols=27  Identities=26%  Similarity=0.737  Sum_probs=23.5

Q ss_pred             CcccccCCCCCcCCChhHHHHHhhhhcCC
Q psy4019          15 PYVCGEENCTKRYTDPSSLRKHIKTVHGE   43 (109)
Q Consensus        15 p~~C~~~~C~k~f~~~~~l~~H~~~h~~~   43 (109)
                      ||.|..  |++.|.....|..|+++|+++
T Consensus         1 ~~~C~~--C~k~f~~~~~l~~H~~~h~~~   27 (27)
T 1znf_A            1 XYKCGL--CERSFVEKSALSRHQRVHKNX   27 (27)
T ss_dssp             -CBCSS--SCCBCSSHHHHHHHGGGTCC-
T ss_pred             CccCCC--CCCcCCCHHHHHHHHHHcCCC
Confidence            588999  999999999999999998763

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.23  E-value=3.7e-08  Score=45.77  Aligned_cols=33  Identities=3%  Similarity=-0.001  Sum_probs=29.7

Q ss_pred             hhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccC
Q psy4019          39 TVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVS   83 (109)
Q Consensus        39 ~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~   83 (109)
                      .|.++++|.|.            .|++.|.....|..|+++|++.
T Consensus         3 ~h~~~k~~~C~------------~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            3 SGSSGKPYKCP------------QCSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             CSCCCCSEECS------------SSSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCC------------CCCcccCCHHHHHHHHHHccCC
Confidence            47889999999            9999999999999999988754

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.23  E-value=8.8e-07  Score=39.05  Aligned_cols=29  Identities=34%  Similarity=0.690  Sum_probs=25.8

Q ss_pred             CCcccccCCCCCcCCChhHHHHH-hhhhcCCC
Q psy4019          14 KPYVCGEENCTKRYTDPSSLRKH-IKTVHGEH   44 (109)
Q Consensus        14 ~p~~C~~~~C~k~f~~~~~l~~H-~~~h~~~k   44 (109)
                      +||.|..  |++.|.....|..| +++|++++
T Consensus         1 k~~~C~~--C~k~f~~~~~l~~H~~~~H~~~~   30 (30)
T 1paa_A            1 KAYACGL--CNRAFTRRDLLIRHAQKIHSGNL   30 (30)
T ss_dssp             CCSBCTT--TCCBCSSSHHHHHHHTTTSCCCC
T ss_pred             CCcCCcc--cCcccCChHHHHHHHHHHccCCC
Confidence            4799999  99999999999999 78888764

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.22  E-value=6.4e-07  Score=38.73  Aligned_cols=27  Identities=37%  Similarity=0.765  Sum_probs=24.5

Q ss_pred             CCCcccccCCCCCcCCChhHHHHHhhhhc
Q psy4019          13 QKPYVCGEENCTKRYTDPSSLRKHIKTVH   41 (109)
Q Consensus        13 ~~p~~C~~~~C~k~f~~~~~l~~H~~~h~   41 (109)
                      ++||.|..  |++.|.....|..|+++|+
T Consensus         1 ek~~~C~~--C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSL--CPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSS--SSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCC--cChhhCCHHHHHHHHHHcc
Confidence            47899999  9999999999999998874

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.20  E-value=2.5e-08  Score=53.52  Aligned_cols=35  Identities=20%  Similarity=0.361  Sum_probs=33.7

Q ss_pred             CCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019          13 QKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus        13 ~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      +++|.|..  |++.|.....|..|+++|+++++|.|.
T Consensus        37 ~~~~~C~~--C~~~f~~~~~l~~H~~~H~~~~~~~C~   71 (73)
T 2ctu_A           37 RKTPMCEK--CRKDSCQEAALNKDEGNESGKKTSGPS   71 (73)
T ss_dssp             SSSCCCHH--HHHTCSCCCSSCCCSSCCCCCCCSSCC
T ss_pred             CCCCCCCC--CChhhcCHHHHHHHHHhhcCCCCCCCC
Confidence            68999999  999999999999999999999999998

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.18  E-value=5.2e-07  Score=39.19  Aligned_cols=27  Identities=22%  Similarity=0.528  Sum_probs=24.3

Q ss_pred             CCCcccccCCCCCcCCChhHHHHHhhhhc
Q psy4019          13 QKPYVCGEENCTKRYTDPSSLRKHIKTVH   41 (109)
Q Consensus        13 ~~p~~C~~~~C~k~f~~~~~l~~H~~~h~   41 (109)
                      ++||.|..  |++.|.....|..|+++|+
T Consensus         1 ~k~~~C~~--C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            1 AAPYRCPL--CRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CCTEEETT--TTEEESCHHHHHHHHTTCC
T ss_pred             CcCcCCCC--CCcccCCHHHHHHHHHhcC
Confidence            47899999  9999999999999998764

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.14  E-value=5e-08  Score=46.28  Aligned_cols=26  Identities=8%  Similarity=-0.020  Sum_probs=24.2

Q ss_pred             hcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccc
Q psy4019          40 VHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSA   77 (109)
Q Consensus        40 h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~   77 (109)
                      +++++||+|.            .|+++|.+.+.|..|+
T Consensus         3 ~~gekp~~C~------------~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            3 LLKPARFMCL------------PCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSSCCCCEET------------TTTEECSCHHHHHHHH
T ss_pred             CCCccCeECC------------CCCCccCCHhHccCcC
Confidence            4689999999            9999999999999997

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.41  E-value=3.2e-07  Score=39.38  Aligned_cols=26  Identities=12%  Similarity=0.106  Sum_probs=22.8

Q ss_pred             CCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccc
Q psy4019          44 HCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTAS   81 (109)
Q Consensus        44 kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~   81 (109)
                      +||.|.            .|++.|.....|..|+++|+
T Consensus         1 kp~~C~------------~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            1 KPYVCE------------RCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            579999            99999999999999998763

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.12  E-value=1.4e-06  Score=47.26  Aligned_cols=42  Identities=14%  Similarity=0.271  Sum_probs=35.1

Q ss_pred             chhhhcc-ccCCC-CCcccccCCCCCcCCChhHHHHHhhhhc-CCCC
Q psy4019           2 KLNLAYP-LLSSQ-KPYVCGEENCTKRYTDPSSLRKHIKTVH-GEHC   45 (109)
Q Consensus         2 ~l~~H~~-~h~~~-~p~~C~~~~C~k~f~~~~~l~~H~~~h~-~~kp   45 (109)
                      .|..|++ .|.++ ++|.|..  |++.|.....|..|++.+. .+.|
T Consensus        30 ~L~~H~~~~h~~~~~~~~C~~--C~~~f~~~~~L~~H~~~~H~~~~p   74 (77)
T 2ct1_A           30 TMKMHILQKHTENVAKFHCPH--CDTVIARKSDLGVHLRKQHSYSGP   74 (77)
T ss_dssp             HHHHHHHHHSSSSCSSEECSS--SSCEESSHHHHHHHHHHTSCCSCC
T ss_pred             HHHHHHHHhcCCCCCccCCCC--CCCccCCHHHHHHHHHHhCCCCCC
Confidence            5788987 68875 8999999  9999999999999999754 4444

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.12  E-value=8.6e-08  Score=45.05  Aligned_cols=34  Identities=3%  Similarity=-0.121  Sum_probs=28.6

Q ss_pred             hcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccC
Q psy4019          40 VHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVS   83 (109)
Q Consensus        40 h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~   83 (109)
                      |+++++|.|...          .|++.|.+...|..|+++|++.
T Consensus         3 ~~~~k~~~C~~~----------~C~k~f~~~~~L~~H~~~H~~e   36 (37)
T 1va1_A            3 PGKKKQHICHIQ----------GCGKVYGKTSHLRAHLRWHTGE   36 (37)
T ss_dssp             SSSCCCEECCST----------TCCCEESCHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCC----------CCCCccCCHHHHHHHHHhcCCC
Confidence            678999999811          3999999999999999988764

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.11  E-value=1.2e-07  Score=44.09  Aligned_cols=33  Identities=0%  Similarity=-0.057  Sum_probs=29.2

Q ss_pred             hhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccC
Q psy4019          39 TVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVS   83 (109)
Q Consensus        39 ~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~   83 (109)
                      .|.++++|.|.            .|++.|.....|..|+++|++.
T Consensus         3 ~~~~~k~~~C~------------~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            3 SGSSGKIFTCE------------YCNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             TTSCCCCEECT------------TTCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCCCCCEECC------------CCCceeCCHHHHHHHHHHhCCC
Confidence            36788999999            9999999999999999988754

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.08  E-value=2.9e-07  Score=46.90  Aligned_cols=41  Identities=17%  Similarity=0.058  Sum_probs=36.4

Q ss_pred             hhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCcccccc-ccccCCCCCCCCC
Q psy4019          39 TVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAK-TASVSSPSIKSEV   91 (109)
Q Consensus        39 ~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~-~~~~~~p~~~~~~   91 (109)
                      .|.++++|.|.            .|++.|.+...|..|++ +|+...|+.+..-
T Consensus         6 ~~~~~k~~~C~------------~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C   47 (54)
T 2eps_A            6 SGSVGKPYICQ------------SCGKGFSRPDHLNGHIKQVHTSERPHKCQVW   47 (54)
T ss_dssp             CCCSSCCEECS------------SSCCEESSHHHHHHHHHHTSCCCCCCCSSSS
T ss_pred             CCCCCCCeECC------------CCCcccCCHHHHHHHHHHhcCCCCCccCCCC
Confidence            46788999999            99999999999999997 9999999987654

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.36  E-value=4.4e-07  Score=40.03  Aligned_cols=29  Identities=3%  Similarity=-0.096  Sum_probs=25.7

Q ss_pred             CCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccC
Q psy4019          43 EHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVS   83 (109)
Q Consensus        43 ~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~   83 (109)
                      ++||.|.            .|++.|.....|..|+++|++.
T Consensus         1 ~k~~~C~------------~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            1 MKPYVCI------------HCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            4689999            9999999999999999988753

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.34  E-value=4.8e-07  Score=39.74  Aligned_cols=28  Identities=4%  Similarity=0.025  Sum_probs=25.1

Q ss_pred             CCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccC
Q psy4019          44 HCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVS   83 (109)
Q Consensus        44 kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~   83 (109)
                      +||.|.            .|++.|.....|..|+++|++.
T Consensus         1 k~~~C~------------~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            1 KPCQCV------------MCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            579999            9999999999999999988753

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.01  E-value=2.4e-06  Score=37.20  Aligned_cols=27  Identities=33%  Similarity=0.728  Sum_probs=24.2

Q ss_pred             CCcccc--cCCCCCcCCChhHHHHHhhhhcC
Q psy4019          14 KPYVCG--EENCTKRYTDPSSLRKHIKTVHG   42 (109)
Q Consensus        14 ~p~~C~--~~~C~k~f~~~~~l~~H~~~h~~   42 (109)
                      ++|.|.  .  |++.|.....|..|+++|++
T Consensus         1 k~~~C~~~~--C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFEN--CGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTT--TCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCc--CcCccCCHHHHHHHHHHhCC
Confidence            478999  7  99999999999999998864

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.23  E-value=8.9e-07  Score=37.90  Aligned_cols=26  Identities=46%  Similarity=0.963  Sum_probs=23.5

Q ss_pred             CCcccccCCCCCcCCChhHHHHHhhhhc
Q psy4019          14 KPYVCGEENCTKRYTDPSSLRKHIKTVH   41 (109)
Q Consensus        14 ~p~~C~~~~C~k~f~~~~~l~~H~~~h~   41 (109)
                      +||.|..  |++.|.....|..|+++|+
T Consensus         1 kp~~C~~--C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            1 KPYVCER--CGKRFVQSSQLANHIRHHD   26 (26)
Confidence            4799999  9999999999999998764

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.98  E-value=1.8e-07  Score=40.75  Aligned_cols=27  Identities=19%  Similarity=0.063  Sum_probs=24.1

Q ss_pred             CCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccc
Q psy4019          43 EHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTAS   81 (109)
Q Consensus        43 ~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~   81 (109)
                      ++||.|.            .|++.|.+...|..|+++|+
T Consensus         1 ~k~~~C~------------~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            1 AAPYRCP------------LCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CCTEEET------------TTTEEESCHHHHHHHHTTCC
T ss_pred             CcCcCCC------------CCCcccCCHHHHHHHHHhcC
Confidence            4789999            99999999999999998764

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.97  E-value=3.4e-07  Score=39.90  Aligned_cols=27  Identities=15%  Similarity=0.121  Sum_probs=24.4

Q ss_pred             CCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccc
Q psy4019          43 EHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTAS   81 (109)
Q Consensus        43 ~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~   81 (109)
                      +++|.|.            .|++.|.....|..|+++|+
T Consensus         1 ~k~~~C~------------~C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            1 MRPYSCS------------VCGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             CCSEECS------------SSCCEESCHHHHHHHHTTSC
T ss_pred             CcCccCC------------CCCcccCCHHHHHHHHHhcC
Confidence            4789999            99999999999999998875

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.97  E-value=2.3e-07  Score=40.25  Aligned_cols=27  Identities=15%  Similarity=0.108  Sum_probs=24.0

Q ss_pred             CCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccc
Q psy4019          43 EHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTAS   81 (109)
Q Consensus        43 ~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~   81 (109)
                      ++||.|.            .|++.|.....|..|+++|+
T Consensus         1 ek~~~C~------------~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCS------------LCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECS------------SSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCC------------CcChhhCCHHHHHHHHHHcc
Confidence            4789999            99999999999999988764

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=97.94  E-value=6.9e-07  Score=39.10  Aligned_cols=28  Identities=18%  Similarity=-0.001  Sum_probs=25.2

Q ss_pred             CCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccC
Q psy4019          44 HCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVS   83 (109)
Q Consensus        44 kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~   83 (109)
                      +||.|.            .|++.|.....|..|+++|++.
T Consensus         1 k~~~C~------------~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            1 YKFACP------------ECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CCEECS------------SSSCEESCSHHHHHHHTGGGSC
T ss_pred             CCccCC------------CCCchhCCHHHHHHHHHHhcCC
Confidence            589999            9999999999999999998754

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.94  E-value=1.9e-06  Score=45.83  Aligned_cols=54  Identities=11%  Similarity=0.085  Sum_probs=43.2

Q ss_pred             cccccCCCCCcCCChhHHHHHh-hhhcCCC------CcccCCCCCCCCCCCCCCCCCcCCCCCCccccccc
Q psy4019          16 YVCGEENCTKRYTDPSSLRKHI-KTVHGEH------CYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKT   79 (109)
Q Consensus        16 ~~C~~~~C~k~f~~~~~l~~H~-~~h~~~k------p~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~   79 (109)
                      +.|.+..|++.|.....|..|+ +.|.+.+      .|.|.          |..|++.+.....|..|++.
T Consensus         2 l~C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~----------W~~C~~~~~~~~~L~~Hir~   62 (64)
T 1zw8_A            2 LKCKWKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACN----------WEDCDFLGDDTASIVNHINA   62 (64)
T ss_dssp             CCCCCTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECC----------CSSCCCEESSHHHHHHHHHH
T ss_pred             CeEeeCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEee----------CCCCcCCCCChHHHHhhccc
Confidence            4677777999999999999998 4787665      78886          55898888777778778764

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=97.94  E-value=4.9e-08  Score=51.43  Aligned_cols=44  Identities=0%  Similarity=-0.081  Sum_probs=36.5

Q ss_pred             HHHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCCCCC
Q psy4019          34 RKHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKSEVS   92 (109)
Q Consensus        34 ~~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~~~~   92 (109)
                      ..|+++|++++||.|.            .|++.|.....|.   ++|++..|+.+..-.
T Consensus         3 ~~h~~~H~~~k~~~C~------------~C~k~F~~~~~l~---~~H~~~k~~~C~~C~   46 (62)
T 1vd4_A            3 ETDERDSTNRASFKCP------------VCSSTFTDLEANQ---LFDPMTGTFRCTFCH   46 (62)
T ss_dssp             CCCSSSCCSSSEEECS------------SSCCEEEHHHHHH---HEETTTTEEBCSSSC
T ss_pred             hhHHHHcCCCCCccCC------------CCCchhccHHHhH---hhcCCCCCEECCCCC
Confidence            3577889999999999            9999998877775   788888888776643

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.93  E-value=1e-06  Score=38.33  Aligned_cols=28  Identities=4%  Similarity=-0.133  Sum_probs=25.0

Q ss_pred             CCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccC
Q psy4019          44 HCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVS   83 (109)
Q Consensus        44 kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~   83 (109)
                      +||.|.            .|++.|.....|..|+++|++.
T Consensus         1 k~~~C~------------~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            1 KEHKCP------------HCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCCS------------SCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCCcCC------------CCCcccCCHHHHHHHHHHhccC
Confidence            589999            9999999999999999988754

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=97.91  E-value=9.3e-07  Score=38.79  Aligned_cols=29  Identities=14%  Similarity=0.146  Sum_probs=25.6

Q ss_pred             CCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCC
Q psy4019          44 HCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSS   84 (109)
Q Consensus        44 kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~   84 (109)
                      ++|.|.            .|++.|.....|..|+++|++..
T Consensus         1 k~~~C~------------~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            1 KTYQCQ------------YCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCS------------SSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccCC------------CCCCccCCHHHHHHHHHHHccCC
Confidence            579999            99999999999999999887653

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.91  E-value=5.5e-07  Score=39.59  Aligned_cols=29  Identities=17%  Similarity=0.043  Sum_probs=25.8

Q ss_pred             CCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccC
Q psy4019          43 EHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVS   83 (109)
Q Consensus        43 ~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~   83 (109)
                      ++||.|.            .|++.|.....|..|+++|++.
T Consensus         1 ~k~~~C~------------~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            1 MKPYQCD------------YCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCCEECT------------TTCCEESCHHHHHHHHHTTCCC
T ss_pred             CcCccCC------------CCCcccCCHHHHHHHHHHhccC
Confidence            4789999            9999999999999999988764

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.86  E-value=2.4e-06  Score=38.28  Aligned_cols=31  Identities=13%  Similarity=0.081  Sum_probs=25.6

Q ss_pred             CCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccC
Q psy4019          43 EHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVS   83 (109)
Q Consensus        43 ~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~   83 (109)
                      ++||.|..-          .|++.|.+...|..|+++|++.
T Consensus         1 ek~~~C~~~----------~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            1 DRPYSCDHP----------GCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCT----------TCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCCcCcCC----------CCCCccCCHHHHHHHHHHccCC
Confidence            478999721          4999999999999999998764

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.83  E-value=2.9e-06  Score=37.25  Aligned_cols=28  Identities=25%  Similarity=0.162  Sum_probs=24.5

Q ss_pred             CCcccCCCCCCCCCCCCCCCCCcCCCCCCcccc-ccccccC
Q psy4019          44 HCYANKKHKGMPSKDKDGLGGASPSRSDDMPLS-AKTASVS   83 (109)
Q Consensus        44 kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H-~~~~~~~   83 (109)
                      +||.|.            .|++.|.....|..| +++|++.
T Consensus         1 k~~~C~------------~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            1 KAYACG------------LCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CCSBCT------------TTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CCcCCc------------ccCcccCChHHHHHHHHHHccCC
Confidence            579999            999999999999999 7888753

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=97.82  E-value=1.1e-06  Score=38.38  Aligned_cols=28  Identities=4%  Similarity=0.125  Sum_probs=24.8

Q ss_pred             CCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccC
Q psy4019          44 HCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVS   83 (109)
Q Consensus        44 kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~   83 (109)
                      +||.|.            .|++.|.....|..|+++|++.
T Consensus         1 k~~~C~------------~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            1 RSFVCE------------VCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCCBCT------------TTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CCeECC------------CCCcccCCHHHHHHHHHHhcCC
Confidence            479999            9999999999999999988753

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.81  E-value=1e-07  Score=53.95  Aligned_cols=42  Identities=5%  Similarity=-0.058  Sum_probs=37.4

Q ss_pred             hhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCCC
Q psy4019          37 IKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKSE   90 (109)
Q Consensus        37 ~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~~   90 (109)
                      .++|+++++|.|.            .|++.|.+...|..|+++|++..|+.+..
T Consensus        17 ~~~H~~~kpy~C~------------~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~   58 (88)
T 1x6f_A           17 NGPRLQNSTYQCK------------HCDSKLQSTAELTSHLNIHNEEFQKRAKR   58 (88)
T ss_dssp             CCSCCCCSCEECS------------SSCCEESSHHHHHHHHHHHHHHHHHHCCC
T ss_pred             ccccCCCCCCcCC------------CCCCEeCCHHHHHHHHHHhCCCCCcccch
Confidence            4578999999999            99999999999999999999888886654

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=97.78  E-value=1.9e-06  Score=37.00  Aligned_cols=26  Identities=12%  Similarity=0.046  Sum_probs=22.8

Q ss_pred             CcccCCCCCCCCCCCCCCCCCcCCCCCCcccccccccc
Q psy4019          45 CYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASV   82 (109)
Q Consensus        45 p~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~   82 (109)
                      ||.|.            .|++.|.....|..|+++|++
T Consensus         1 ~~~C~------------~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCG------------LCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCS------------SSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCC------------CCCCcCCCHHHHHHHHHHcCC
Confidence            58899            999999999999999998864

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.73  E-value=2.9e-06  Score=37.75  Aligned_cols=30  Identities=17%  Similarity=0.170  Sum_probs=24.6

Q ss_pred             CCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccC
Q psy4019          44 HCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVS   83 (109)
Q Consensus        44 kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~   83 (109)
                      +||.|...          .|++.|.....|..|+++|++.
T Consensus         1 kp~~C~~~----------~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            1 RPFMCTWS----------YCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCCBCCST----------TCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CCcCCcCC----------CCCcccCCHhHHHHHHHHhcCC
Confidence            47888521          7999999999999999998764

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.64  E-value=1.4e-06  Score=37.97  Aligned_cols=28  Identities=11%  Similarity=-0.014  Sum_probs=24.8

Q ss_pred             CCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccC
Q psy4019          44 HCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVS   83 (109)
Q Consensus        44 kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~   83 (109)
                      +||.|.            .|++.|.....|..|+++|++.
T Consensus         1 ~~~~C~------------~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2m0f_A            1 GPLKCR------------ECGKQFTTSGNLKRHLRIHSGE   28 (29)
T ss_dssp             CCEECT------------TTSCEESCHHHHHHHHHHHHTC
T ss_pred             CCccCC------------CCCCccCChhHHHHHHHHhcCC
Confidence            579999            9999999999999999988754

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.02  E-value=2.4e-05  Score=33.75  Aligned_cols=20  Identities=15%  Similarity=0.042  Sum_probs=18.2

Q ss_pred             CCCCcCCCCCCccccccccc
Q psy4019          62 LGGASPSRSDDMPLSAKTAS   81 (109)
Q Consensus        62 ~C~~~f~~~~~l~~H~~~~~   81 (109)
                      .|++.|.....|..|+++|+
T Consensus         9 ~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            9 NCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             TTCEEESSHHHHHHHHGGGT
T ss_pred             cCcCccCCHHHHHHHHHHhC
Confidence            78999999999999999876

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.76  E-value=6e-05  Score=40.97  Aligned_cols=39  Identities=21%  Similarity=0.342  Sum_probs=33.4

Q ss_pred             chhhhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCC
Q psy4019           2 KLNLAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEH   44 (109)
Q Consensus         2 ~l~~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~k   44 (109)
                      .|..|+ .|.+++++.|..  |++.|. ...|..|++++.+++
T Consensus        31 ~L~~H~-~~c~~~~~~C~~--C~~~~~-~~~l~~H~~~c~~~~   69 (75)
T 2d9k_A           31 KLKEHE-DYCGARTELCGN--CGRNVL-VKDLKTHPEVCGREG   69 (75)
T ss_dssp             HHHHHH-HHHHHCEEECSS--SCCEEE-TTGGGTHHHHBTTBS
T ss_pred             HHHHHH-hHcCCCceEccc--CCCcCc-HHHHHHHHHHccCCc
Confidence            477898 899999999999  999877 588999999888753

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.74  E-value=0.00034  Score=41.79  Aligned_cols=30  Identities=23%  Similarity=0.555  Sum_probs=27.1

Q ss_pred             cccCCCCCcccccCCCCCcCCChhHHHHHhhh
Q psy4019           8 PLLSSQKPYVCGEENCTKRYTDPSSLRKHIKT   39 (109)
Q Consensus         8 ~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~   39 (109)
                      --|+|+++|.|..  |++.|.....|..|+++
T Consensus        43 ed~tGekpfyC~~--C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           43 PDLPGGGLHRCLA--CARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SSSGGGGCSEETT--TTEECSSHHHHHHHTTC
T ss_pred             ccCCCCcceEccc--CcchhCCHHHHHHHHhh
Confidence            3588999999999  99999999999999874

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.49  E-value=0.00012  Score=43.75  Aligned_cols=29  Identities=7%  Similarity=-0.080  Sum_probs=26.3

Q ss_pred             hhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccc
Q psy4019          39 TVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKT   79 (109)
Q Consensus        39 ~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~   79 (109)
                      -|+|+++|.|.            .|++.|.+...|..|+++
T Consensus        44 d~tGekpfyC~------------~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           44 DLPGGGLHRCL------------ACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SSGGGGCSEET------------TTTEECSSHHHHHHHTTC
T ss_pred             cCCCCcceEcc------------cCcchhCCHHHHHHHHhh
Confidence            47889999999            999999999999999875

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=95.92  E-value=0.0059  Score=32.02  Aligned_cols=39  Identities=28%  Similarity=0.367  Sum_probs=31.3

Q ss_pred             chhhhc-cccCCCC------CcccccCCCCCcCCChhHHHHHhhhh
Q psy4019           2 KLNLAY-PLLSSQK------PYVCGEENCTKRYTDPSSLRKHIKTV   40 (109)
Q Consensus         2 ~l~~H~-~~h~~~~------p~~C~~~~C~k~f~~~~~l~~H~~~h   40 (109)
                      .|..|+ ..|.+.+      +|.|.+.+|++.+.....|..|++..
T Consensus        18 ~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A           18 DLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             HHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             HHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            367787 4677665      79999888999988889999998863

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.36  E-value=0.039  Score=27.16  Aligned_cols=23  Identities=22%  Similarity=0.567  Sum_probs=21.4

Q ss_pred             CCcccccCCCCCcCCChhHHHHHhh
Q psy4019          14 KPYVCGEENCTKRYTDPSSLRKHIK   38 (109)
Q Consensus        14 ~p~~C~~~~C~k~f~~~~~l~~H~~   38 (109)
                      .+|.|+.  |+..|.....|+.|++
T Consensus        11 ~~~~CPr--Cn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           11 GRKICPR--CNAQFRVTEALRGHMC   33 (49)
T ss_dssp             SCCCCTT--TCCCCSSHHHHHHHHH
T ss_pred             CceeCCc--ccccccchHHHHhhhh
Confidence            5789999  9999999999999997

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=90.72  E-value=0.052  Score=32.27  Aligned_cols=22  Identities=18%  Similarity=0.267  Sum_probs=19.5

Q ss_pred             CCcccccCCCCCcCCChhHHHHHh
Q psy4019          14 KPYVCGEENCTKRYTDPSSLRKHI   37 (109)
Q Consensus        14 ~p~~C~~~~C~k~f~~~~~l~~H~   37 (109)
                      +++.|..  |...|.....+..|.
T Consensus        31 ~~~~C~~--C~v~~~S~s~~~~H~   52 (127)
T 1zu1_A           31 SDTQCKV--CSAVLISESQKLAHY   52 (127)
T ss_dssp             CSSEETT--TTEECCSHHHHHHHH
T ss_pred             CCCcCcC--CCCEeCCHHHHHHHH
Confidence            5788999  999999999888887

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=90.54  E-value=0.018  Score=28.37  Aligned_cols=25  Identities=4%  Similarity=-0.261  Sum_probs=21.7

Q ss_pred             CCcccCCCCCCCCCCCCCCCCCcCCCCCCcccccccc
Q psy4019          44 HCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTA   80 (109)
Q Consensus        44 kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~   80 (109)
                      -+|.|+            .|++.|...+.|+.|++-.
T Consensus        11 ~~~~CP------------rCn~~f~~~~sLr~Hmkyc   35 (49)
T 2e72_A           11 GRKICP------------RCNAQFRVTEALRGHMCYC   35 (49)
T ss_dssp             SCCCCT------------TTCCCCSSHHHHHHHHHHH
T ss_pred             CceeCC------------cccccccchHHHHhhhhhc
Confidence            468999            9999999999999999843

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=87.37  E-value=0.67  Score=25.24  Aligned_cols=62  Identities=16%  Similarity=0.191  Sum_probs=43.5

Q ss_pred             CCCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCCCCC
Q psy4019          12 SQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPSIKS   89 (109)
Q Consensus        12 ~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~~~~   89 (109)
                      ...-|.|..  |+..+. +..+..|...-.+...|.|-            .|++.|.. ...+.|.+..+..-=|...
T Consensus         7 ~MV~F~C~~--Cgd~lK-K~kv~~H~~~Cr~~~~~SCI------------DC~~~F~~-~~y~~HtsCISEaeKY~g~   68 (79)
T 1wjv_A            7 GMVFFTCNA--CGESVK-KIQVEKHVSNCRNCECLSCI------------DCGKDFWG-DDYKSHVKCISEGQKYGGK   68 (79)
T ss_dssp             CCCEEEESS--SCCEEE-TTHHHHHHHHCTTCCEEEET------------TTTEEEEG-GGTTTCCCCCSCTTSSCCC
T ss_pred             ceeEEEcCC--CCCeee-cccchhHHhhCCCCCcEEec------------ccCCeeCC-CCEeCEeeeCChhheeeec
Confidence            334588998  997754 45688887655555679999            99999964 5677787766655444433

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=86.35  E-value=0.19  Score=30.91  Aligned_cols=57  Identities=12%  Similarity=0.160  Sum_probs=39.8

Q ss_pred             CCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCCCC
Q psy4019          14 KPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSSPS   86 (109)
Q Consensus        14 ~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~p~   86 (109)
                      ++..|+.  |+..+ ....|..|....-..+.-.|.            .|+..+ ....|..|...+++..++
T Consensus       109 ~~v~C~~--C~~~~-~r~~l~~H~~~~C~~r~~~C~------------~C~~~~-~~~~l~~H~~~~~~~~~~  165 (170)
T 3hcs_A          109 ALMDCPQ--CQRPF-QKFHINIHILKDCPRRQVSCD------------NCAASM-AFEDKEIHDQNCPLALEH  165 (170)
T ss_dssp             SEEECTT--TCCEE-EGGGHHHHHHHTCTTCEEECT------------TTCCEE-EGGGHHHHHTTCCC----
T ss_pred             eeeECCC--CChHH-HHHHHHHHhhhhCCCCCeECC------------CCCCcc-CHHHHHhHHHhCcChhhh
Confidence            4567876  98876 566788898766666777898            888877 445777888887776543

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=85.25  E-value=1.1  Score=20.53  Aligned_cols=25  Identities=12%  Similarity=0.240  Sum_probs=21.4

Q ss_pred             CCcccccCCCCCcCCChhHHHHHhhhh
Q psy4019          14 KPYVCGEENCTKRYTDPSSLRKHIKTV   40 (109)
Q Consensus        14 ~p~~C~~~~C~k~f~~~~~l~~H~~~h   40 (109)
                      ..+.|..  |+-.|.....+..|++..
T Consensus         7 ~~~~C~~--C~IsF~~l~ty~aHKk~Y   31 (36)
T 1fu9_A            7 MKKYCST--CDISFNYVKTYLAHKQFY   31 (36)
T ss_dssp             CCSEETT--TTEECSSHHHHHHHHHHT
T ss_pred             CcCeecc--ccceehhhHHHhhhheec
Confidence            4678999  999999999999997643

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	109
d2glia5	29	g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo	1e-11
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	7e-06
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	1e-05
d1ubdc4	28	g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger	1e-05
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	2e-05
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	3e-05
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	6e-05
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	8e-05
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	8e-05
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	1e-04
d1ubdc3	30	g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger	1e-04
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	2e-04
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	5e-04
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	8e-04
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	0.002
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	0.003
d2j7ja2	29	g.37.1.1 (A:29-57) Transcription factor IIIA, TFII	0.003

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.6 bits (126), Expect = 1e-11
 Identities = 24/29 (82%), Positives = 25/29 (86%)

Query: 14 KPYVCGEENCTKRYTDPSSLRKHIKTVHG 42
          KPYVC    CTKRYTDPSSLRKH+KTVHG
Sbjct: 1  KPYVCKLPGCTKRYTDPSSLRKHVKTVHG 29

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.7 bits (88), Expect = 7e-06
 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 3/37 (8%)

Query: 11 SSQKPYVCGEENCTKRYTDPSSLRKHIKTVH-GEHCY 46
          S  KPY+C    C K ++ P  L  HIK VH  E  +
Sbjct: 1  SVGKPYICQS--CGKGFSRPDHLNGHIKQVHTSERPH 35

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.3 bits (87), Expect = 1e-05
 Identities = 11/30 (36%), Positives = 18/30 (60%)

Query: 14 KPYVCGEENCTKRYTDPSSLRKHIKTVHGE 43
          KP+ C  E C K Y+   +L+ H+++  GE
Sbjct: 1  KPHKCTFEGCRKSYSRLENLKTHLRSHTGE 30

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.9 bits (86), Expect = 1e-05
 Identities = 10/26 (38%), Positives = 17/26 (65%)

Query: 14 KPYVCGEENCTKRYTDPSSLRKHIKT 39
          +PYVC  + C K++   ++L+ HI T
Sbjct: 1  RPYVCPFDGCNKKFAQSTNLKSHILT 26

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.5 bits (85), Expect = 2e-05
 Identities = 11/30 (36%), Positives = 15/30 (50%), Gaps = 2/30 (6%)

Query: 14 KPYVCGEENCTKRYTDPSSLRKHIKTVHGE 43
          KPY C    C  R+T   +++ HI   H E
Sbjct: 7  KPYECYI--CHARFTQSGTMKMHILQKHTE 34

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.1 bits (84), Expect = 3e-05
 Identities = 11/30 (36%), Positives = 18/30 (60%)

Query: 14 KPYVCGEENCTKRYTDPSSLRKHIKTVHGE 43
          +P++C    C KR+T    L++H +T  GE
Sbjct: 1  RPFMCTWSYCGKRFTRSDELQRHKRTHTGE 30

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 35.4 bits (82), Expect = 6e-05
 Identities = 8/26 (30%), Positives = 12/26 (46%)

Query: 14 KPYVCGEENCTKRYTDPSSLRKHIKT 39
          +PY C    C K +     L +H K+
Sbjct: 2  RPYSCDHPGCDKAFVRNHDLIRHKKS 27

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.0 bits (81), Expect = 8e-05
 Identities = 9/26 (34%), Positives = 17/26 (65%)

Query: 14 KPYVCGEENCTKRYTDPSSLRKHIKT 39
          +PY C  E+C +R++  + L +HI+ 
Sbjct: 1  RPYACPVESCDRRFSRSADLTRHIRI 26

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.0 bits (81), Expect = 8e-05
 Identities = 10/30 (33%), Positives = 11/30 (36%), Gaps = 2/30 (6%)

Query: 14 KPYVCGEENCTKRYTDPSSLRKHIKTVHGE 43
          KPY C    C K +     L  H K  H  
Sbjct: 7  KPYACSH--CDKTFRQKQLLDMHFKRYHDP 34

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.5 bits (80), Expect = 1e-04
 Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 2/30 (6%)

Query: 14 KPYVCGEENCTKRYTDPSSLRKHIKTVHGE 43
          KPY C E  C K ++  S L +H +   GE
Sbjct: 6  KPYGCVE--CGKAFSRSSILVQHQRVHTGE 33

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.3 bits (79), Expect = 1e-04
 Identities = 11/30 (36%), Positives = 18/30 (60%)

Query: 14 KPYVCGEENCTKRYTDPSSLRKHIKTVHGE 43
          KP+ C  E C KR++   +LR H++   G+
Sbjct: 1  KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 30

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.3 bits (79), Expect = 2e-04
 Identities = 8/31 (25%), Positives = 13/31 (41%)

Query: 16 YVCGEENCTKRYTDPSSLRKHIKTVHGEHCY 46
          + C E  C K +     L++H+K       Y
Sbjct: 2  FSCPEPACGKSFNFKKHLKEHMKLHSDTRDY 32

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.7 bits (75), Expect = 5e-04
 Identities = 12/30 (40%), Positives = 15/30 (50%), Gaps = 2/30 (6%)

Query: 14 KPYVCGEENCTKRYTDPSSLRKHIKTVHGE 43
          K + C E  C KR+     L KHIKT   +
Sbjct: 1  KKFACPE--CPKRFMRSDHLSKHIKTHQNK 28

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 32.2 bits (74), Expect = 8e-04
 Identities = 7/30 (23%), Positives = 15/30 (50%), Gaps = 2/30 (6%)

Query: 14 KPYVCGEENCTKRYTDPSSLRKHIKTVHGE 43
          + +VC    CT+ +     L++H ++   E
Sbjct: 1  RSFVCEV--CTRAFARQEHLKRHYRSHTNE 28

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 31.0 bits (71), Expect = 0.002
 Identities = 9/27 (33%), Positives = 14/27 (51%), Gaps = 2/27 (7%)

Query: 13 QKPYVCGEENCTKRYTDPSSLRKHIKT 39
          QKP+ C    C + ++    L  HI+T
Sbjct: 1  QKPFQCRI--CMRNFSRSDHLTTHIRT 25

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 31.1 bits (70), Expect = 0.003
 Identities = 9/30 (30%), Positives = 15/30 (50%)

Query: 14 KPYVCGEENCTKRYTDPSSLRKHIKTVHGE 43
          K + C    CTK +    ++R HI+T   +
Sbjct: 17 KTFECLFPGCTKTFKRRYNIRSHIQTHLED 46

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

 Score = 30.8 bits (69), Expect = 0.003
 Identities = 13/27 (48%), Positives = 17/27 (62%)

Query: 13 QKPYVCGEENCTKRYTDPSSLRKHIKT 39
          Q PY C  E C KR++ PS L++H K 
Sbjct: 1  QLPYECPHEGCDKRFSLPSRLKRHEKV 27

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	109
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.68
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.48
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.37
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.37
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.34
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.32
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.29
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.28
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.24
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.19
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.17
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.17
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.16
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	99.14
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.13
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.12
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.11
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.1
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	99.09
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.08
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.07
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.03
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.97
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.97
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.96
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.94
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.94
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.94
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.91
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.86
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.84
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.82
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.72
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.69
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.69
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.63
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.63
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.54
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.5
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.32
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.29
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.27
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.26
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.17
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.16
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.15
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	98.11
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.04
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.96
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.85
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.77
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	97.71
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.69
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.61
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.61
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.59
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.53
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.49
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.36
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.29
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.23
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.23
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.16
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.01
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.95
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	96.95
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.91
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.87
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	96.75
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	96.73
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.37
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.35
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.12
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.12
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.08
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.02
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	95.97
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.93
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	95.74
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.47
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.35
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	95.32
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	95.24
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	94.89
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	94.88
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	94.72
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	94.61
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	94.05
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	93.72
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	93.34
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	92.58
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	91.56
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	89.81
d1y0jb1	36	U-shaped transcription factor, different fingers {	86.26
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	86.13
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	85.55
d1x3ca1	61	Zinc finger protein 292, ZNF292 {Human (Homo sapie	80.95
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	80.38

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=2.7e-18  Score=88.26  Aligned_cols=53  Identities=23%  Similarity=0.343  Sum_probs=50.9

Q ss_pred             CCCcccccCCCCCcCCChhHHHHHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCcccccccc
Q psy4019          13 QKPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTA   80 (109)
Q Consensus        13 ~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~   80 (109)
                      |+||.| .  ||++|.....|..|+++|++++||.|.            .||+.|.....|..|+++|
T Consensus         1 EK~y~C-~--Cgk~F~~~~~l~~H~~~Ht~ekpy~C~------------~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPC-Q--CGKSFTHKSQRDRHMSMHLGLRPYGCG------------VCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEEC-T--TSCEESSHHHHHHHHHHHSCCCSEECT------------TTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCC-C--CCCeECCHHHhHHHhhccccccCCcCC------------CcCCEecCHHHHHHHHhcC
Confidence            689999 7  999999999999999999999999999            9999999999999999876

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=1.5e-14  Score=68.91  Aligned_cols=37  Identities=32%  Similarity=0.539  Sum_probs=35.6

Q ss_pred             hhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCC
Q psy4019           5 LAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGE   43 (109)
Q Consensus         5 ~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~   43 (109)
                      +|+++|++++||.|..  ||++|...++|..|+++|+||
T Consensus         2 rH~~~Ht~ekpy~C~~--CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDE--CGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSS--SCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCC--CCceeeCHHHHHHhCccCCCC
Confidence            5899999999999999  999999999999999999986

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.37  E-value=1.6e-13  Score=65.37  Aligned_cols=36  Identities=33%  Similarity=0.647  Sum_probs=33.7

Q ss_pred             CCCCcccccCCCCCcCCChhHHHHHhh-hhcCCCCcccC
Q psy4019          12 SQKPYVCGEENCTKRYTDPSSLRKHIK-TVHGEHCYANK   49 (109)
Q Consensus        12 ~~~p~~C~~~~C~k~f~~~~~l~~H~~-~h~~~kp~~C~   49 (109)
                      .++||.|..  ||++|....+|.+|++ +|+++|||+|+
T Consensus         2 ~~Kpy~C~~--Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           2 VGKPYICQS--CGKGFSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             SSCCEECSS--SCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCCCccCCC--CCCCcCChHHhhccCcCccCCCcCcCCc
Confidence            478999999  9999999999999976 79999999997

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.37  E-value=1.7e-13  Score=62.91  Aligned_cols=33  Identities=39%  Similarity=0.713  Sum_probs=31.7

Q ss_pred             ccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCC
Q psy4019           9 LLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGE   43 (109)
Q Consensus         9 ~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~   43 (109)
                      +|+|++||.|..  |+++|...+.|..|+++|+||
T Consensus         1 IHTgekpy~C~~--Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVE--CGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSS--SCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCC--CCCEeCchHHhHhhccccCCC
Confidence            699999999999  999999999999999999986

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.34  E-value=3.7e-13  Score=63.54  Aligned_cols=35  Identities=20%  Similarity=0.382  Sum_probs=33.4

Q ss_pred             hccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcC
Q psy4019           6 AYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHG   42 (109)
Q Consensus         6 H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~   42 (109)
                      |.|+|+|++||.|..  |+++|.+..+|..|+++|.+
T Consensus         2 h~R~HTgeKPy~C~~--C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPD--CDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTT--TCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEeCC--CCCEecCHHHHHHHHhcCcC
Confidence            789999999999999  99999999999999999875

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.32  E-value=2.3e-13  Score=67.46  Aligned_cols=42  Identities=21%  Similarity=0.366  Sum_probs=36.3

Q ss_pred             chhhhccccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCCC
Q psy4019           2 KLNLAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGEH   44 (109)
Q Consensus         2 ~l~~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~k   44 (109)
                      .|..|+. |++++||.|.+++|+++|....+|..|+++|+|+|
T Consensus         6 ~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           6 SIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             hhcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            4566774 99999999987779999999999999999999985

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.29  E-value=6.8e-13  Score=62.08  Aligned_cols=34  Identities=24%  Similarity=0.496  Sum_probs=32.2

Q ss_pred             cccccCCCCCcCCChhHHHHHhhhhcCCCCcccC
Q psy4019          16 YVCGEENCTKRYTDPSSLRKHIKTVHGEHCYANK   49 (109)
Q Consensus        16 ~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~C~   49 (109)
                      |.|.+++|+++|.....|.+|+++|+|++||+|+
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            6788888999999999999999999999999997

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.28  E-value=1.1e-12  Score=61.43  Aligned_cols=34  Identities=29%  Similarity=0.639  Sum_probs=32.2

Q ss_pred             cccCCCCCcccccCCCCCcCCChhHHHHHhhhhcCC
Q psy4019           8 PLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGE   43 (109)
Q Consensus         8 ~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~   43 (109)
                      |+|+|++||.|..  |+++|.....|..|+++|+++
T Consensus         1 R~HTgekPy~C~~--C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKPYACSH--CDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TTCCCCCCEECSS--SSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCCEECCC--CCCCcCCHhHHHHhCcccCCC
Confidence            6899999999999  999999999999999999875

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=6.6e-14  Score=66.60  Aligned_cols=37  Identities=19%  Similarity=0.116  Sum_probs=34.5

Q ss_pred             HHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccC
Q psy4019          35 KHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVS   83 (109)
Q Consensus        35 ~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~   83 (109)
                      +|+++|+++|||+|.            .||++|.+.++|..|+++|+++
T Consensus         2 rH~~~Ht~ekpy~C~------------~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCD------------ECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCS------------SSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecC------------CCCceeeCHHHHHHhCccCCCC
Confidence            478899999999999            9999999999999999999874

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.19  E-value=3.3e-13  Score=63.69  Aligned_cols=35  Identities=23%  Similarity=0.177  Sum_probs=32.4

Q ss_pred             HhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCcccccccccc
Q psy4019          36 HIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASV   82 (109)
Q Consensus        36 H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~   82 (109)
                      |.|+|+|+|||+|.            .|+++|.+.++|..|+++|..
T Consensus         2 h~R~HTgeKPy~C~------------~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCP------------DCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCT------------TTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEeC------------CCCCEecCHHHHHHHHhcCcC
Confidence            56899999999999            999999999999999998864

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.17  E-value=8.7e-12  Score=57.79  Aligned_cols=32  Identities=25%  Similarity=0.600  Sum_probs=30.4

Q ss_pred             cCCCCCcccccCCCCCcCCChhHHHHHhhhhcCC
Q psy4019          10 LSSQKPYVCGEENCTKRYTDPSSLRKHIKTVHGE   43 (109)
Q Consensus        10 h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~   43 (109)
                      |+|++||.|..  |++.|.+..+|.+|+++|+..
T Consensus         2 ~TGekPy~C~~--C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRI--CLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSS--SCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCC--CCCcccChHHHHHHccccCCc
Confidence            79999999999  999999999999999999864

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.17  E-value=1.2e-11  Score=55.88  Aligned_cols=31  Identities=35%  Similarity=0.800  Sum_probs=28.5

Q ss_pred             CCcccccCCCCCcCCChhHHHHHhhhhcCCC
Q psy4019          14 KPYVCGEENCTKRYTDPSSLRKHIKTVHGEH   44 (109)
Q Consensus        14 ~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~k   44 (109)
                      +||.|++++|++.|....+|.+|+++|+|+|
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            5899988789999999999999999999985

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.16  E-value=5.1e-13  Score=61.27  Aligned_cols=33  Identities=21%  Similarity=0.139  Sum_probs=31.0

Q ss_pred             hhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccC
Q psy4019          39 TVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVS   83 (109)
Q Consensus        39 ~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~   83 (109)
                      +|+|+|||+|.            .||++|.+.+.|..|+++|+++
T Consensus         1 IHTgekpy~C~------------~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCV------------ECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECS------------SSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCC------------CCCCEeCchHHhHhhccccCCC
Confidence            58999999999            9999999999999999999874

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.14  E-value=2.2e-11  Score=54.44  Aligned_cols=30  Identities=37%  Similarity=0.747  Sum_probs=28.1

Q ss_pred             CCcccccCCCCCcCCChhHHHHHhhhhcCC
Q psy4019          14 KPYVCGEENCTKRYTDPSSLRKHIKTVHGE   43 (109)
Q Consensus        14 ~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~   43 (109)
                      +||.|.+++|+++|....+|.+|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            689999999999999999999999999986

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.13  E-value=1.8e-11  Score=57.16  Aligned_cols=32  Identities=34%  Similarity=0.670  Sum_probs=29.1

Q ss_pred             cccCCCCCcccccCCCCCcCCChhHHHHHhhhhc
Q psy4019           8 PLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTVH   41 (109)
Q Consensus         8 ~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~   41 (109)
                      |+|+|++||.|..  |++.|....+|.+|++.+.
T Consensus         1 R~HTgekP~~C~~--C~k~F~~~~~L~~H~~~~H   32 (36)
T d2ct1a2           1 RTHSGEKPYECYI--CHARFTQSGTMKMHILQKH   32 (36)
T ss_dssp             CCCSCCCSEECTT--TCCEESCHHHHHHHHHHHS
T ss_pred             CccCCCCCEeCCC--CcccccchHHHHHHccccc
Confidence            6899999999999  9999999999999976543

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.12  E-value=2e-11  Score=54.30  Aligned_cols=29  Identities=24%  Similarity=0.723  Sum_probs=27.7

Q ss_pred             CCcccccCCCCCcCCChhHHHHHhhhhcCCC
Q psy4019          14 KPYVCGEENCTKRYTDPSSLRKHIKTVHGEH   44 (109)
Q Consensus        14 ~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~k   44 (109)
                      +||.|..  |+++|.+...|.+|+++|+|||
T Consensus         1 kp~~C~~--C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEV--CTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTT--TCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCC--CCCCCCCchHcccccCcccCCC
Confidence            6899999  9999999999999999999986

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.11  E-value=3.2e-11  Score=53.53  Aligned_cols=29  Identities=41%  Similarity=0.802  Sum_probs=27.6

Q ss_pred             CCcccccCCCCCcCCChhHHHHHhhhhcCCC
Q psy4019          14 KPYVCGEENCTKRYTDPSSLRKHIKTVHGEH   44 (109)
Q Consensus        14 ~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~k   44 (109)
                      +||.|..  |+++|.+.+.|.+|+++|+|+|
T Consensus         1 Kpy~C~~--C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPE--CPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTT--TTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCc--CCCeecchHHhhhhcCccCCcC
Confidence            6899999  9999999999999999999986

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.10  E-value=1.1e-12  Score=61.43  Aligned_cols=34  Identities=18%  Similarity=0.114  Sum_probs=31.7

Q ss_pred             hhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccC
Q psy4019          38 KTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVS   83 (109)
Q Consensus        38 ~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~   83 (109)
                      |+|+|+|||+|.            .|+++|.+.+.|..|+++|+..
T Consensus         1 R~HTgekPy~C~------------~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKPYACS------------HCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TTCCCCCCEECS------------SSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCCEECC------------CCCCCcCCHhHHHHhCcccCCC
Confidence            579999999999            9999999999999999999864

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.09  E-value=2.6e-11  Score=54.29  Aligned_cols=30  Identities=37%  Similarity=0.780  Sum_probs=28.0

Q ss_pred             CCcccccCCCCCcCCChhHHHHHhhhhcCC
Q psy4019          14 KPYVCGEENCTKRYTDPSSLRKHIKTVHGE   43 (109)
Q Consensus        14 ~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~   43 (109)
                      +||.|.+++|+++|....+|.+|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            689999888999999999999999999986

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.08  E-value=1.2e-11  Score=62.81  Aligned_cols=37  Identities=24%  Similarity=0.494  Sum_probs=35.2

Q ss_pred             chhhhccccCCCCCcccccCCCCCcCCChhHHHHHhhhh
Q psy4019           2 KLNLAYPLLSSQKPYVCGEENCTKRYTDPSSLRKHIKTV   40 (109)
Q Consensus         2 ~l~~H~~~h~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h   40 (109)
                      +|..|+++|++++||.|..  |+++|.....|..|+++|
T Consensus        17 ~l~~H~~~Ht~ekpy~C~~--C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1          17 QRDRHMSMHLGLRPYGCGV--CGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             HHHHHHHHHSCCCSEECTT--TSCEESSSHHHHHHHTTT
T ss_pred             HhHHHhhccccccCCcCCC--cCCEecCHHHHHHHHhcC
Confidence            5889999999999999999  999999999999999876

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.07  E-value=2.9e-11  Score=53.21  Aligned_cols=28  Identities=36%  Similarity=0.823  Sum_probs=26.7

Q ss_pred             CCCcccccCCCCCcCCChhHHHHHhhhhcC
Q psy4019          13 QKPYVCGEENCTKRYTDPSSLRKHIKTVHG   42 (109)
Q Consensus        13 ~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~   42 (109)
                      |+||.|..  |+++|.+..+|..|+++|+|
T Consensus         1 EKPy~C~~--C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRI--CMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTT--TCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCC--CcCEecccccccccCCCccC
Confidence            68999999  99999999999999999986

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.03  E-value=4.6e-12  Score=58.73  Aligned_cols=32  Identities=6%  Similarity=0.071  Sum_probs=30.0

Q ss_pred             hcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccC
Q psy4019          40 VHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVS   83 (109)
Q Consensus        40 h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~   83 (109)
                      |+|+|||+|.            .|++.|.+..+|..|+++|+..
T Consensus         2 ~TGekPy~C~------------~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCR------------ICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECS------------SSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCC------------CCCCcccChHHHHHHccccCCc
Confidence            6899999999            9999999999999999999864

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.97  E-value=1.1e-10  Score=51.67  Aligned_cols=29  Identities=34%  Similarity=0.928  Sum_probs=26.7

Q ss_pred             CCcccccCCCCCcCCChhHHHHHhhhhcC
Q psy4019          14 KPYVCGEENCTKRYTDPSSLRKHIKTVHG   42 (109)
Q Consensus        14 ~p~~C~~~~C~k~f~~~~~l~~H~~~h~~   42 (109)
                      +||.|.+++|+++|....+|.+|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            68999999999999999999999999986

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.97  E-value=2.6e-10  Score=51.56  Aligned_cols=30  Identities=27%  Similarity=0.661  Sum_probs=26.3

Q ss_pred             CCCcccccCCCCCcCCChhHHHHHhhhhcC
Q psy4019          13 QKPYVCGEENCTKRYTDPSSLRKHIKTVHG   42 (109)
Q Consensus        13 ~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~   42 (109)
                      |+||.|.+++|+++|....+|.+|+++|+.
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            578999888899999999999999998875

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.96  E-value=6.2e-12  Score=58.78  Aligned_cols=32  Identities=22%  Similarity=0.215  Sum_probs=28.7

Q ss_pred             hhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccc
Q psy4019          38 KTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTAS   81 (109)
Q Consensus        38 ~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~   81 (109)
                      |+|+|+|||+|+            .|++.|.+.++|..|++.++
T Consensus         1 R~HTgekP~~C~------------~C~k~F~~~~~L~~H~~~~H   32 (36)
T d2ct1a2           1 RTHSGEKPYECY------------ICHARFTQSGTMKMHILQKH   32 (36)
T ss_dssp             CCCSCCCSEECT------------TTCCEESCHHHHHHHHHHHS
T ss_pred             CccCCCCCEeCC------------CCcccccchHHHHHHccccc
Confidence            579999999999            99999999999999986544

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.94  E-value=6.8e-12  Score=55.30  Aligned_cols=28  Identities=18%  Similarity=0.195  Sum_probs=26.5

Q ss_pred             CCCcccCCCCCCCCCCCCCCCCCcCCCCCCcccccccccc
Q psy4019          43 EHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASV   82 (109)
Q Consensus        43 ~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~   82 (109)
                      ||||+|.            .|++.|.++++|..|+++|++
T Consensus         1 EKPy~C~------------~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCR------------ICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECT------------TTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCC------------CCcCEecccccccccCCCccC
Confidence            6899999            999999999999999999975

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.94  E-value=2.1e-10  Score=50.24  Aligned_cols=28  Identities=36%  Similarity=0.860  Sum_probs=20.9

Q ss_pred             CCcccccCCCCCcCCChhHHHHHhhhhc
Q psy4019          14 KPYVCGEENCTKRYTDPSSLRKHIKTVH   41 (109)
Q Consensus        14 ~p~~C~~~~C~k~f~~~~~l~~H~~~h~   41 (109)
                      +||.|.+++|+++|....+|.+|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            4777777777777777777777777764

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.94  E-value=8.4e-12  Score=61.69  Aligned_cols=41  Identities=12%  Similarity=-0.007  Sum_probs=34.5

Q ss_pred             HHHHHhhhhcCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccC
Q psy4019          32 SLRKHIKTVHGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVS   83 (109)
Q Consensus        32 ~l~~H~~~h~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~   83 (109)
                      .+..|++ |++++||+|..-          .|++.|.+.++|..|+++|++.
T Consensus         6 ~l~~h~~-h~gekpy~C~~~----------~C~k~F~~~~~L~~H~r~Htge   46 (47)
T d1ncsa_           6 SIDKYVK-EMPDKTFECLFP----------GCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             SGGGSCE-EETTTEEECCCT----------TCCCEECSSSSHHHHHHHHTTT
T ss_pred             hhcchhh-ccCCCCeECCcC----------CCCccccCchHHHhhcccccCC
Confidence            4556664 999999999711          4999999999999999999975

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.91  E-value=2.6e-10  Score=48.99  Aligned_cols=26  Identities=38%  Similarity=0.719  Sum_probs=24.6

Q ss_pred             CCcccccCCCCCcCCChhHHHHHhhhhc
Q psy4019          14 KPYVCGEENCTKRYTDPSSLRKHIKTVH   41 (109)
Q Consensus        14 ~p~~C~~~~C~k~f~~~~~l~~H~~~h~   41 (109)
                      +||.|.+  ||++|...+.|..|+++|+
T Consensus         1 KPy~C~e--CgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLE--CGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSS--SCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCC--CcCeeccCcccccCccCCC
Confidence            6999999  9999999999999999985

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.86  E-value=1e-10  Score=51.86  Aligned_cols=29  Identities=21%  Similarity=0.070  Sum_probs=27.0

Q ss_pred             CCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCC
Q psy4019          44 HCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSS   84 (109)
Q Consensus        44 kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~   84 (109)
                      |||.|.            .|+++|.++++|..|+++|+++.
T Consensus         1 Kpy~C~------------~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACP------------ECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCT------------TTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECC------------cCCCeecchHHhhhhcCccCCcC
Confidence            699999            99999999999999999999863

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.84  E-value=9.3e-11  Score=55.51  Aligned_cols=36  Identities=19%  Similarity=0.125  Sum_probs=32.8

Q ss_pred             CCCCcccCCCCCCCCCCCCCCCCCcCCCCCCcccccc-ccccCCCCCCC
Q psy4019          42 GEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAK-TASVSSPSIKS   89 (109)
Q Consensus        42 ~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~-~~~~~~p~~~~   89 (109)
                      .+|||+|.            .||+.|.+.++|..|++ +|++.+||.+.
T Consensus         2 ~~Kpy~C~------------~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           2 VGKPYICQ------------SCGKGFSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             SSCCEECS------------SSCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCCCccCC------------CCCCCcCChHHhhccCcCccCCCcCcCCc
Confidence            47999999            99999999999999986 89999999764

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.82  E-value=1e-10  Score=51.95  Aligned_cols=29  Identities=3%  Similarity=0.122  Sum_probs=27.0

Q ss_pred             CCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCC
Q psy4019          44 HCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSS   84 (109)
Q Consensus        44 kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~   84 (109)
                      |||+|+            .|+++|.+.+.|..|+++|++++
T Consensus         1 kp~~C~------------~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCE------------VCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCT------------TTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCC------------CCCCCCCCchHcccccCcccCCC
Confidence            699999            99999999999999999999863

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.72  E-value=8.7e-11  Score=50.54  Aligned_cols=26  Identities=12%  Similarity=0.060  Sum_probs=24.4

Q ss_pred             CCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccc
Q psy4019          44 HCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTAS   81 (109)
Q Consensus        44 kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~   81 (109)
                      |||+|.            +||++|.+++.|..|+++|+
T Consensus         1 KPy~C~------------eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCL------------ECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECS------------SSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCC------------CCcCeeccCcccccCccCCC
Confidence            699999            99999999999999999875

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.69  E-value=1.8e-09  Score=47.16  Aligned_cols=28  Identities=11%  Similarity=-0.035  Sum_probs=24.7

Q ss_pred             CCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccc
Q psy4019          44 HCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTAS   81 (109)
Q Consensus        44 kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~   81 (109)
                      |||.|...          .|+++|.+.++|..|+++|+
T Consensus         1 rPf~C~~~----------gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFD----------GCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCST----------TCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCC----------CcCCcCCCHHHHHHHHhhcc
Confidence            68999843          69999999999999999885

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.69  E-value=1.3e-09  Score=49.20  Aligned_cols=31  Identities=13%  Similarity=0.081  Sum_probs=27.2

Q ss_pred             CCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccC
Q psy4019          43 EHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVS   83 (109)
Q Consensus        43 ~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~   83 (109)
                      |+||.|..-          .|+++|.+.++|..|+++|+..
T Consensus         1 ErP~~C~~p----------gC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           1 DRPYSCDHP----------GCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCT----------TCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CcCeECcCC----------CCCCeeCCHHHHHHHhhhccCC
Confidence            689999833          5999999999999999999864

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.63  E-value=1.4e-09  Score=48.87  Aligned_cols=31  Identities=16%  Similarity=0.166  Sum_probs=27.0

Q ss_pred             CCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCC
Q psy4019          44 HCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSS   84 (109)
Q Consensus        44 kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~   84 (109)
                      |||.|+.-          .|++.|.+.++|..|+++|++++
T Consensus         1 kpf~C~~~----------~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWS----------YCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCST----------TCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCC----------CCCcCcCChhHhhhhcCcccccC
Confidence            68999633          79999999999999999999863

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.63  E-value=7.2e-10  Score=49.36  Aligned_cols=30  Identities=10%  Similarity=-0.079  Sum_probs=26.2

Q ss_pred             CCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccC
Q psy4019          44 HCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVS   83 (109)
Q Consensus        44 kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~   83 (109)
                      |||.|...          .|+++|.+.++|..|+++|+++
T Consensus         1 kp~~C~~~----------gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFE----------GCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCST----------TCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCC----------CCCceECChhHhhhhcCcCcCC
Confidence            68999832          5999999999999999999874

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.54  E-value=8.7e-10  Score=49.15  Aligned_cols=30  Identities=7%  Similarity=-0.083  Sum_probs=26.2

Q ss_pred             CCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccC
Q psy4019          44 HCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVS   83 (109)
Q Consensus        44 kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~   83 (109)
                      |||.|...          .|+++|.+.++|..|+++|+++
T Consensus         1 kp~~C~~~----------gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFE----------GCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCST----------TCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCC----------CCCceECcHHHcCccccccCCC
Confidence            68999833          6999999999999999999874

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.50  E-value=1.4e-09  Score=48.01  Aligned_cols=29  Identities=21%  Similarity=0.095  Sum_probs=25.6

Q ss_pred             CCcccCCCCCCCCCCCCCCCCCcCCCCCCcccccccccc
Q psy4019          44 HCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASV   82 (109)
Q Consensus        44 kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~   82 (109)
                      |||.|...          .|+++|.++++|..|+++|++
T Consensus         1 Kp~~C~~~----------gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVE----------SCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCST----------TCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCC----------CCCcEECchhHhhhhcCccCC
Confidence            68999843          699999999999999999875

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.32  E-value=2.2e-07  Score=38.14  Aligned_cols=26  Identities=27%  Similarity=0.667  Sum_probs=23.9

Q ss_pred             CcccccCCCCCcCCChhHHHHHhhhhcC
Q psy4019          15 PYVCGEENCTKRYTDPSSLRKHIKTVHG   42 (109)
Q Consensus        15 p~~C~~~~C~k~f~~~~~l~~H~~~h~~   42 (109)
                      |++|..  |++.|.....|..|++.|+|
T Consensus         1 phkc~~--c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEV--CGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTT--TTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccch--hhhHhcchhHHHHHhhccCC
Confidence            578999  99999999999999999875

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.29  E-value=1.2e-08  Score=43.23  Aligned_cols=27  Identities=26%  Similarity=0.266  Sum_probs=24.1

Q ss_pred             CCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccc
Q psy4019          43 EHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTAS   81 (109)
Q Consensus        43 ~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~   81 (109)
                      ||||.|.            .||+.|.+++...+|.++|-
T Consensus         1 EkPf~C~------------~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACD------------ICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECT------------TTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccc------------hhhhhhhcchhhhhhhhhcc
Confidence            6899999            99999999999998988774

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.27  E-value=2.1e-07  Score=40.87  Aligned_cols=32  Identities=31%  Similarity=0.538  Sum_probs=29.2

Q ss_pred             CCcccccCCCCCcCCChhHHHHHhhhhcCCCCcc
Q psy4019          14 KPYVCGEENCTKRYTDPSSLRKHIKTVHGEHCYA   47 (109)
Q Consensus        14 ~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~kp~~   47 (109)
                      +...|..  ||+.|...-.|.+|...|.++|||.
T Consensus         4 k~~~ce~--cgk~frdvyhlnrhklshs~ekpys   35 (35)
T d2epra1           4 KQVACEI--CGKIFRDVYHLNRHKLSHSGEKPYS   35 (35)
T ss_dssp             CSEEETT--TTEEESSHHHHHHHGGGSCSCCCCC
T ss_pred             hhhhHHH--HHHHHHHHHHHHhhhcccCCCCCCC
Confidence            4568999  9999999999999999999999984

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.26  E-value=1.7e-08  Score=46.67  Aligned_cols=28  Identities=18%  Similarity=-0.008  Sum_probs=26.3

Q ss_pred             CCCCcCCCCCCccccccccccCCCCCCC
Q psy4019          62 LGGASPSRSDDMPLSAKTASVSSPSIKS   89 (109)
Q Consensus        62 ~C~~~f~~~~~l~~H~~~~~~~~p~~~~   89 (109)
                      .|++.|.+...|..|+++|++.+|+.+.
T Consensus         8 ~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           8 ACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             TTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             CCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            6999999999999999999999999874

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.17  E-value=6.4e-07  Score=37.84  Aligned_cols=27  Identities=22%  Similarity=0.694  Sum_probs=25.3

Q ss_pred             CCCcccccCCCCCcCCChhHHHHHhhhhc
Q psy4019          13 QKPYVCGEENCTKRYTDPSSLRKHIKTVH   41 (109)
Q Consensus        13 ~~p~~C~~~~C~k~f~~~~~l~~H~~~h~   41 (109)
                      ++||.|..  ||+.|..+....+|.++|.
T Consensus         1 EkPf~C~~--CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDI--CGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTT--TCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccch--hhhhhhcchhhhhhhhhcc
Confidence            58999999  9999999999999999885

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.16  E-value=5.1e-08  Score=40.07  Aligned_cols=26  Identities=15%  Similarity=0.102  Sum_probs=23.4

Q ss_pred             CcccCCCCCCCCCCCCCCCCCcCCCCCCcccccccccc
Q psy4019          45 CYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASV   82 (109)
Q Consensus        45 p~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~   82 (109)
                      |.+|+            .|+++|++.+.|..|++.|++
T Consensus         1 phkc~------------~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCE------------VCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBT------------TTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccc------------hhhhHhcchhHHHHHhhccCC
Confidence            56899            999999999999999998874

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.15  E-value=7e-07  Score=37.28  Aligned_cols=27  Identities=37%  Similarity=0.714  Sum_probs=24.5

Q ss_pred             CcccccCCCCCcCCChhHHHHHhhhhcCC
Q psy4019          15 PYVCGEENCTKRYTDPSSLRKHIKTVHGE   43 (109)
Q Consensus        15 p~~C~~~~C~k~f~~~~~l~~H~~~h~~~   43 (109)
                      .+.|..  ||++|...+.|++|+.+|+|+
T Consensus         2 ~hvc~e--cgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           2 VHVCAE--CGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             CEECTT--TCCEESSHHHHHHHGGGTSCC
T ss_pred             cchHHH--HhHHHHHHHHHHHHhhcccCC
Confidence            367988  999999999999999999985

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=98.11  E-value=8.8e-07  Score=37.26  Aligned_cols=28  Identities=43%  Similarity=0.838  Sum_probs=25.1

Q ss_pred             CCcccccCCCCCcCCChhHHHHHhhhhc
Q psy4019          14 KPYVCGEENCTKRYTDPSSLRKHIKTVH   41 (109)
Q Consensus        14 ~p~~C~~~~C~k~f~~~~~l~~H~~~h~   41 (109)
                      .||.|..++|++.|...+.|++|.++|.
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvha   29 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVHA   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhccC
Confidence            5899999999999999999999998873

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.04  E-value=1.6e-06  Score=37.06  Aligned_cols=28  Identities=82%  Similarity=1.361  Sum_probs=23.8

Q ss_pred             CCcccccCCCCCcCCChhHHHHHhhhhc
Q psy4019          14 KPYVCGEENCTKRYTDPSSLRKHIKTVH   41 (109)
Q Consensus        14 ~p~~C~~~~C~k~f~~~~~l~~H~~~h~   41 (109)
                      +||.|..++|++.+...++|++|++.+.
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~H   28 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVH   28 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhC
Confidence            5888988889999999999999988654

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.96  E-value=2.6e-06  Score=35.94  Aligned_cols=30  Identities=43%  Similarity=0.779  Sum_probs=27.3

Q ss_pred             CCcccccCCCCCcCCChhHHHHHhhhhcCC
Q psy4019          14 KPYVCGEENCTKRYTDPSSLRKHIKTVHGE   43 (109)
Q Consensus        14 ~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~   43 (109)
                      +||.|..++|.+.|...-.|.+|.-.|+|+
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            589999999999999999999999899875

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.85  E-value=2.8e-06  Score=36.64  Aligned_cols=28  Identities=39%  Similarity=0.835  Sum_probs=17.9

Q ss_pred             CCcccccCCCCCcCCChhHHHHHh-hhhc
Q psy4019          14 KPYVCGEENCTKRYTDPSSLRKHI-KTVH   41 (109)
Q Consensus        14 ~p~~C~~~~C~k~f~~~~~l~~H~-~~h~   41 (109)
                      +||.|..++|.|+|...+.-.+|+ |+|.
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs   29 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHS   29 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTC
T ss_pred             CCccccCCChhhhhcchhhhhhhcccccc
Confidence            466666666777776666666665 5554

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.77  E-value=7.6e-06  Score=34.22  Aligned_cols=29  Identities=24%  Similarity=0.657  Sum_probs=26.5

Q ss_pred             CCCcccccCCCCCcCCChhHHHHHhhhhcCC
Q psy4019          13 QKPYVCGEENCTKRYTDPSSLRKHIKTVHGE   43 (109)
Q Consensus        13 ~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~   43 (109)
                      ++||+|..  |...-...+.|..|.+.|+|+
T Consensus         1 erpfkcql--csy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQI--CPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSS--SSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeee--cccccCCchheEEeeecccCc
Confidence            57999999  999999999999999999874

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.71  E-value=1.4e-05  Score=36.20  Aligned_cols=30  Identities=27%  Similarity=0.670  Sum_probs=26.6

Q ss_pred             CCCCcccccCCCCCcCCChhHHHHHhhhhc
Q psy4019          12 SQKPYVCGEENCTKRYTDPSSLRKHIKTVH   41 (109)
Q Consensus        12 ~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~   41 (109)
                      .++||.|..++|+..|.....|..|++.|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            479999998889999999999999987764

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.69  E-value=1.5e-05  Score=34.05  Aligned_cols=29  Identities=28%  Similarity=0.734  Sum_probs=26.6

Q ss_pred             CCCcccccCCCCCcCCChhHHHHHhhhhcCC
Q psy4019          13 QKPYVCGEENCTKRYTDPSSLRKHIKTVHGE   43 (109)
Q Consensus        13 ~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~   43 (109)
                      ++||.|+.  |...|....-+.-|.+.|.|.
T Consensus         1 ekp~~cpi--c~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPV--CGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETT--TTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccch--HHHHhhccccceEeeecccCc
Confidence            58999999  999999999999999999874

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.61  E-value=3.7e-05  Score=32.20  Aligned_cols=27  Identities=44%  Similarity=0.822  Sum_probs=24.9

Q ss_pred             cccccCCCCCcCCChhHHHHHhhhhcCCC
Q psy4019          16 YVCGEENCTKRYTDPSSLRKHIKTVHGEH   44 (109)
Q Consensus        16 ~~C~~~~C~k~f~~~~~l~~H~~~h~~~k   44 (109)
                      |.|..  |+......+-|.+|++.|++++
T Consensus         2 YvC~~--Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEE--CGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTT--TCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccc--cCcccCCHHHHHHHHHHhcCCC
Confidence            78999  9999999999999999999874

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.61  E-value=2.8e-05  Score=31.36  Aligned_cols=24  Identities=29%  Similarity=0.801  Sum_probs=21.8

Q ss_pred             cccccCCCCCcCCChhHHHHHhhhhc
Q psy4019          16 YVCGEENCTKRYTDPSSLRKHIKTVH   41 (109)
Q Consensus        16 ~~C~~~~C~k~f~~~~~l~~H~~~h~   41 (109)
                      |+|..  |.++|...+.|.+|++.|.
T Consensus         1 ykcgl--cersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGL--CERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSS--SCCBCSSHHHHHHHGGGTC
T ss_pred             Ccccc--hHHHHHHHHHHHHHHHhhc
Confidence            67888  9999999999999999874

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.59  E-value=1.1e-06  Score=37.52  Aligned_cols=29  Identities=14%  Similarity=-0.032  Sum_probs=25.0

Q ss_pred             CCcccCCCCCCCCCCCCCCCCCcCCCCCCcccccccccc
Q psy4019          44 HCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASV   82 (109)
Q Consensus        44 kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~   82 (109)
                      |||.|.+.          .|++++...++|++|++++++
T Consensus         1 KPY~Ck~~----------gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLP----------GCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCST----------TTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccC----------CCCcccCCHHHHHHHHHhhCC
Confidence            68999865          799999999999999997653

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.53  E-value=5.5e-05  Score=30.92  Aligned_cols=26  Identities=27%  Similarity=0.570  Sum_probs=24.0

Q ss_pred             ccccCCCCCcCCChhHHHHHhhhhcCCC
Q psy4019          17 VCGEENCTKRYTDPSSLRKHIKTVHGEH   44 (109)
Q Consensus        17 ~C~~~~C~k~f~~~~~l~~H~~~h~~~k   44 (109)
                      .|+.  |.+.|...-.|..|.+.|+|++
T Consensus         2 qcp~--c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPT--CHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTT--TCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcc--hHHHHHHhHhhhhccccccCCC
Confidence            5888  9999999999999999999985

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.49  E-value=1.4e-05  Score=34.34  Aligned_cols=29  Identities=17%  Similarity=0.062  Sum_probs=24.2

Q ss_pred             CCcccCCCCCCCCCCCCCCCCCcCCCCCCccccc-ccccc
Q psy4019          44 HCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSA-KTASV   82 (109)
Q Consensus        44 kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~-~~~~~   82 (109)
                      |||.|+.-          .|.|.|+..++..+|. ++|+.
T Consensus         1 kPY~C~~~----------gC~KafsNsSDraKHqnRTHs~   30 (31)
T d2glia4           1 KPYMCEHE----------GCSKAFSNASDRAKHQNRTHSN   30 (31)
T ss_dssp             CCEECCST----------TCCCEESSSSTTHHHHHHTTCS
T ss_pred             CCccccCC----------ChhhhhcchhhhhhhccccccC
Confidence            68999854          7999999999999996 77763

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.36  E-value=6e-05  Score=34.61  Aligned_cols=26  Identities=35%  Similarity=0.788  Sum_probs=23.3

Q ss_pred             CCCCCcccccCCCCCcCCChhHHHHHhh
Q psy4019          11 SSQKPYVCGEENCTKRYTDPSSLRKHIK   38 (109)
Q Consensus        11 ~~~~p~~C~~~~C~k~f~~~~~l~~H~~   38 (109)
                      +|-+||.|..  |+|.|.+...+.+|..
T Consensus         1 TGiKPYeC~~--C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           1 TGIKPYECNI--CAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCCEECSS--SCCEESCHHHHHHHHH
T ss_pred             CCCCceeccc--hhhhhhhHHHHHHhhh
Confidence            4779999999  9999999999999864

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.29  E-value=7.5e-05  Score=30.86  Aligned_cols=26  Identities=42%  Similarity=0.770  Sum_probs=24.2

Q ss_pred             CCcccccCCCCCcCCChhHHHHHhhhhc
Q psy4019          14 KPYVCGEENCTKRYTDPSSLRKHIKTVH   41 (109)
Q Consensus        14 ~p~~C~~~~C~k~f~~~~~l~~H~~~h~   41 (109)
                      +||+|..  |..+-...+.|.+|+|+|.
T Consensus         2 kp~kck~--cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKT--CDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSS--SCCEESSHHHHHHHHHHSC
T ss_pred             CCccccc--ccchhcchhhHhhhhhccc
Confidence            7999999  9999999999999999885

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.23  E-value=3.8e-06  Score=35.93  Aligned_cols=28  Identities=21%  Similarity=0.279  Sum_probs=24.8

Q ss_pred             CCCcccCCCCCCCCCCCCCCCCCcCCCCCCcccccccccc
Q psy4019          43 EHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASV   82 (109)
Q Consensus        43 ~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~   82 (109)
                      +|||.|+            .|...|.+.+-|..|.+.|.+
T Consensus         1 ekp~~cp------------ic~qrfkrkdrmsyhvrshdg   28 (32)
T d2epqa1           1 EKPYSCP------------VCGLRFKRKDRMSYHVRSHDG   28 (32)
T ss_dssp             CCSSEET------------TTTEECSCHHHHHHHHHHHSC
T ss_pred             CCCcccc------------hHHHHhhccccceEeeecccC
Confidence            6899999            999999999989888887765

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.23  E-value=7.2e-06  Score=34.29  Aligned_cols=28  Identities=7%  Similarity=0.152  Sum_probs=24.2

Q ss_pred             CCCcccCCCCCCCCCCCCCCCCCcCCCCCCcccccccccc
Q psy4019          43 EHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASV   82 (109)
Q Consensus        43 ~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~   82 (109)
                      ++||+|.            .|...-..++.|..|++.|++
T Consensus         1 erpfkcq------------lcsy~srnssqltvhlr~htg   28 (29)
T d2dmda3           1 ERPFKCQ------------ICPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCCEECS------------SSSCEESSHHHHHHHHTTCCS
T ss_pred             CCcceee------------ecccccCCchheEEeeecccC
Confidence            5799999            898877788889999998876

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.16  E-value=1e-05  Score=37.25  Aligned_cols=29  Identities=10%  Similarity=0.101  Sum_probs=24.3

Q ss_pred             cCCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccc
Q psy4019          41 HGEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTAS   81 (109)
Q Consensus        41 ~~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~   81 (109)
                      +|.|||.|.            .|++.|..++++-+|.....
T Consensus         1 TGiKPYeC~------------~C~KrFMWRDSF~RH~~~C~   29 (44)
T d2csha2           1 TGIKPYECN------------ICAKRFMWRDSFHRHVTSCT   29 (44)
T ss_dssp             CCCCCEECS------------SSCCEESCHHHHHHHHHHHH
T ss_pred             CCCCceecc------------chhhhhhhHHHHHHhhhhhh
Confidence            477999999            99999999999888775443

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.01  E-value=7e-06  Score=34.42  Aligned_cols=27  Identities=11%  Similarity=-0.077  Sum_probs=23.1

Q ss_pred             CCcccCCCCCCCCCCCCCCCCCcCCCCCCcccccccc
Q psy4019          44 HCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTA   80 (109)
Q Consensus        44 kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~   80 (109)
                      .||+|+..          .|+++|+..+-|++|.++|
T Consensus         2 ~py~c~he----------gcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHE----------GCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCST----------TCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCcc----------CccccccCHHHHhhhhhcc
Confidence            48999865          8999999998999998876

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.95  E-value=2.4e-05  Score=34.13  Aligned_cols=26  Identities=12%  Similarity=-0.019  Sum_probs=24.0

Q ss_pred             CCCCcCCCCCCccccccccccCCCCC
Q psy4019          62 LGGASPSRSDDMPLSAKTASVSSPSI   87 (109)
Q Consensus        62 ~C~~~f~~~~~l~~H~~~~~~~~p~~   87 (109)
                      .||+.|...-.|.+|.-.|++++||.
T Consensus        10 ~cgk~frdvyhlnrhklshs~ekpys   35 (35)
T d2epra1          10 ICGKIFRDVYHLNRHKLSHSGEKPYS   35 (35)
T ss_dssp             TTTEEESSHHHHHHHGGGSCSCCCCC
T ss_pred             HHHHHHHHHHHHHhhhcccCCCCCCC
Confidence            99999998889999999999999874

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.95  E-value=0.00064  Score=28.46  Aligned_cols=26  Identities=50%  Similarity=0.819  Sum_probs=23.0

Q ss_pred             CCcccccCCCCCcCCChhHHHHHhhhhc
Q psy4019          14 KPYVCGEENCTKRYTDPSSLRKHIKTVH   41 (109)
Q Consensus        14 ~p~~C~~~~C~k~f~~~~~l~~H~~~h~   41 (109)
                      +||.|..  |.......++|..|+++..
T Consensus         1 kpy~cqy--c~yrsadssnlkthiktkh   26 (30)
T d1klra_           1 KTYQCQY--CEFRSADSSNLKTHIKTKH   26 (30)
T ss_dssp             CCCCCSS--SSCCCSCSHHHHHHHHHHT
T ss_pred             CCccccc--cccccccchhhhhhhhccc
Confidence            5899999  9999999999999998643

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.91  E-value=0.00045  Score=28.77  Aligned_cols=29  Identities=24%  Similarity=0.625  Sum_probs=26.3

Q ss_pred             CCCcccccCCCCCcCCChhHHHHHhhhhcCC
Q psy4019          13 QKPYVCGEENCTKRYTDPSSLRKHIKTVHGE   43 (109)
Q Consensus        13 ~~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~   43 (109)
                      ++-|.|..  |...|.....|..|+-.|+|+
T Consensus         2 eqvftcs~--cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSV--CQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSS--SCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHH--HHHHHHHHHhheeeeecccCC
Confidence            46789999  999999999999999999985

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.87  E-value=0.00056  Score=30.07  Aligned_cols=29  Identities=24%  Similarity=0.562  Sum_probs=23.5

Q ss_pred             CcccccCCCC---CcCCChhHHHHHhhhhcCC
Q psy4019          15 PYVCGEENCT---KRYTDPSSLRKHIKTVHGE   43 (109)
Q Consensus        15 p~~C~~~~C~---k~f~~~~~l~~H~~~h~~~   43 (109)
                      .|.|.+.+|.   +.|...-.|..|+|.|+||
T Consensus         2 ~y~C~W~~C~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2           2 EFVCHWGGCSRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CeEEECCCCCCCCCcchhHHHHHHHHhhcCCC
Confidence            4667776676   4688999999999999986

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.75  E-value=0.00048  Score=31.13  Aligned_cols=29  Identities=17%  Similarity=0.606  Sum_probs=25.8

Q ss_pred             CCcccccCCCCCcCCChhHHHHHhhhhcCCC
Q psy4019          14 KPYVCGEENCTKRYTDPSSLRKHIKTVHGEH   44 (109)
Q Consensus        14 ~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~k   44 (109)
                      +.|.|..  |++.|....+|--|++.|..++
T Consensus         4 r~~~C~~--C~k~F~s~qALGGH~~~Hr~~r   32 (37)
T d1njqa_           4 RSYTCSF--CKREFRSAQALGGHMNVHRRDR   32 (37)
T ss_dssp             SSEECTT--TCCEESSHHHHHHHHHTTCCSC
T ss_pred             CccCCCC--CCCccCCcccccchHhhhcchH
Confidence            5699999  9999999999999999987654

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.73  E-value=0.00046  Score=28.79  Aligned_cols=24  Identities=33%  Similarity=0.750  Sum_probs=21.9

Q ss_pred             CcccccCCCCCcCCChhHHHHHhhhh
Q psy4019          15 PYVCGEENCTKRYTDPSSLRKHIKTV   40 (109)
Q Consensus        15 p~~C~~~~C~k~f~~~~~l~~H~~~h   40 (109)
                      ||.|..  |..+|....+|.+|++..
T Consensus         1 py~C~~--CnF~FKTKGNLTKHmkSK   24 (29)
T d1bboa2           1 PYHCTY--CNFSFKTKGNLTKHMKSK   24 (29)
T ss_dssp             CEECSS--SSCEESSHHHHHHHHHSS
T ss_pred             Ccccce--eeeeEeeccchhHhhhhh
Confidence            689999  999999999999999864

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.37  E-value=5.3e-05  Score=31.33  Aligned_cols=26  Identities=15%  Similarity=0.107  Sum_probs=23.2

Q ss_pred             CCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccc
Q psy4019          44 HCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTAS   81 (109)
Q Consensus        44 kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~   81 (109)
                      |||+|.            .|+..-..++.|.+|.++|+
T Consensus         2 kp~kck------------~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCK------------TCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECS------------SSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccc------------cccchhcchhhHhhhhhccc
Confidence            799999            99988888889999999886

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.35  E-value=8.1e-05  Score=31.90  Aligned_cols=23  Identities=22%  Similarity=0.143  Sum_probs=19.5

Q ss_pred             CcccCCCCCCCCCCCCCCCCCcCCCCCCccccccc
Q psy4019          45 CYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKT   79 (109)
Q Consensus        45 p~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~   79 (109)
                      ||.|.            .|++.|++++.|.+|.+.
T Consensus         1 Pf~C~------------~C~R~FaRrDLlLRH~qK   23 (31)
T d2adra2           1 PYPCG------------LCNRAFTRRDLLIRHAQK   23 (31)
T ss_dssp             SEECT------------TTCCEESSHHHHHHHHTT
T ss_pred             Ccccc------------cccchhhHHHHHHHHHHH
Confidence            68898            999999999988877654

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.12  E-value=0.0014  Score=27.94  Aligned_cols=26  Identities=35%  Similarity=0.802  Sum_probs=22.3

Q ss_pred             CcccccCCCCCcCCChhHHHHHhh-hhcC
Q psy4019          15 PYVCGEENCTKRYTDPSSLRKHIK-TVHG   42 (109)
Q Consensus        15 p~~C~~~~C~k~f~~~~~l~~H~~-~h~~   42 (109)
                      ||.|..  |++.|....-|.+|+. .|.|
T Consensus         1 Pf~C~~--C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGL--CNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTT--TCCEESSHHHHHHHHTTTSCC
T ss_pred             Cccccc--ccchhhHHHHHHHHHHHHhcC
Confidence            789999  9999999999999964 5655

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.12  E-value=0.00012  Score=33.10  Aligned_cols=30  Identities=7%  Similarity=0.097  Sum_probs=24.9

Q ss_pred             CCCCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccc
Q psy4019          42 GEHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTAS   81 (109)
Q Consensus        42 ~~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~   81 (109)
                      .+|||.|..-          .|+.+|...+.|..|.+.|.
T Consensus         3 ddkPF~C~~p----------GC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAP----------GCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCT----------TTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCC----------CccccccchHHHHHhhhhhe
Confidence            4799999643          89999999999999887664

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.08  E-value=0.0022  Score=26.69  Aligned_cols=26  Identities=38%  Similarity=0.858  Sum_probs=22.5

Q ss_pred             CCcccccCCCCCcCCChhHHHHHhhhhc
Q psy4019          14 KPYVCGEENCTKRYTDPSSLRKHIKTVH   41 (109)
Q Consensus        14 ~p~~C~~~~C~k~f~~~~~l~~H~~~h~   41 (109)
                      +||+|..  |.....+.++|..|++.-.
T Consensus         1 rPFkC~~--CsFDtkq~SnL~kH~kk~H   26 (29)
T d1x5wa2           1 RPFKCNY--CSFDTKQPSNLSKHMKKFH   26 (29)
T ss_dssp             CSEECSS--SSCEESSHHHHHHHHHHHH
T ss_pred             CCcccce--ecccccCcchHHHHHHHHc
Confidence            5899999  9998899999999987533

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.02  E-value=0.0021  Score=26.19  Aligned_cols=26  Identities=35%  Similarity=0.622  Sum_probs=21.1

Q ss_pred             cccccCCCCCcCCChhHHHHHhhhhc
Q psy4019          16 YVCGEENCTKRYTDPSSLRKHIKTVH   41 (109)
Q Consensus        16 ~~C~~~~C~k~f~~~~~l~~H~~~h~   41 (109)
                      |.|..++|+++|.....|+.|+-.|+
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeeccc
Confidence            56666779999999998998887765

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.97  E-value=0.00023  Score=29.43  Aligned_cols=21  Identities=10%  Similarity=-0.057  Sum_probs=19.3

Q ss_pred             CCCCcCCCCCCcccccccccc
Q psy4019          62 LGGASPSRSDDMPLSAKTASV   82 (109)
Q Consensus        62 ~C~~~f~~~~~l~~H~~~~~~   82 (109)
                      +||++|..++.|++|.-.|++
T Consensus         7 ecgkaf~essklkrh~lvhtg   27 (28)
T d1ubdc2           7 ECGKAFVESSKLKRHQLVHTG   27 (28)
T ss_dssp             TTCCEESSHHHHHHHGGGTSC
T ss_pred             HHhHHHHHHHHHHHHhhcccC
Confidence            999999999999999988876

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.93  E-value=0.0023  Score=27.05  Aligned_cols=30  Identities=30%  Similarity=0.661  Sum_probs=26.5

Q ss_pred             CCcccccCCCCCcCCChhHHHHHhhhhcCC
Q psy4019          14 KPYVCGEENCTKRYTDPSSLRKHIKTVHGE   43 (109)
Q Consensus        14 ~p~~C~~~~C~k~f~~~~~l~~H~~~h~~~   43 (109)
                      +.|.|..+.|+..|.....|..|.-.|+||
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            468888888999999999999999889885

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=95.74  E-value=0.00036  Score=27.96  Aligned_cols=20  Identities=10%  Similarity=0.024  Sum_probs=17.6

Q ss_pred             CCCCcCCCCCCccccccccc
Q psy4019          62 LGGASPSRSDDMPLSAKTAS   81 (109)
Q Consensus        62 ~C~~~f~~~~~l~~H~~~~~   81 (109)
                      .|.++|...+.|.+|.+.|.
T Consensus         5 lcersfveksalsrhqrvhk   24 (26)
T d1znfa_           5 LCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             SSCCBCSSHHHHHHHGGGTC
T ss_pred             chHHHHHHHHHHHHHHHhhc
Confidence            99999999999999988763

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.47  E-value=0.0071  Score=24.61  Aligned_cols=22  Identities=32%  Similarity=0.682  Sum_probs=19.7

Q ss_pred             CcccccCCCCCcCCChhHHHHHhh
Q psy4019          15 PYVCGEENCTKRYTDPSSLRKHIK   38 (109)
Q Consensus        15 p~~C~~~~C~k~f~~~~~l~~H~~   38 (109)
                      ||.|..  ||+.+....+|..|..
T Consensus         1 pf~c~k--cgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPK--CGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTT--TCCBCSSHHHHHHHHH
T ss_pred             CCcccc--chhhhhhHhHHHHHHH
Confidence            689998  9999999999999864

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.35  E-value=0.00069  Score=28.29  Aligned_cols=29  Identities=7%  Similarity=-0.063  Sum_probs=23.3

Q ss_pred             CCcccCCCCCCCCCCCCCCCCCcCCCCCCcccccccccc
Q psy4019          44 HCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASV   82 (109)
Q Consensus        44 kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~   82 (109)
                      +||.|...          .|.+.|..-..|.+|.-+|++
T Consensus         1 ~pfpc~~e----------gc~kgf~tlhhltrhs~thtg   29 (30)
T d1tf3a2           1 KPFPCKEE----------GCEKGFTSLHHLTRHSLTHTG   29 (30)
T ss_dssp             CSEECCCS----------SCCCEESSTTHHHHHHHHHHT
T ss_pred             CCcCcccc----------cccccchhhhhhhhhhccccC
Confidence            57888754          799999988888888777765

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.32  E-value=0.00063  Score=28.48  Aligned_cols=27  Identities=15%  Similarity=0.153  Sum_probs=22.1

Q ss_pred             CCcccCCCCCCCCCCCCCCCCCcCCCCCCcccccccccc
Q psy4019          44 HCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASV   82 (109)
Q Consensus        44 kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~   82 (109)
                      |||+|.            .|......+++|..|+++-+.
T Consensus         1 kpy~cq------------yc~yrsadssnlkthiktkhs   27 (30)
T d1klra_           1 KTYQCQ------------YCEFRSADSSNLKTHIKTKHS   27 (30)
T ss_dssp             CCCCCS------------SSSCCCSCSHHHHHHHHHHTS
T ss_pred             CCcccc------------ccccccccchhhhhhhhcccc
Confidence            689999            888777788889999887543

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.24  E-value=0.00059  Score=28.40  Aligned_cols=22  Identities=9%  Similarity=0.046  Sum_probs=19.9

Q ss_pred             CCCCcCCCCCCccccccccccC
Q psy4019          62 LGGASPSRSDDMPLSAKTASVS   83 (109)
Q Consensus        62 ~C~~~f~~~~~l~~H~~~~~~~   83 (109)
                      .||..-...+.|.+|+++|+..
T Consensus         6 ~Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           6 ECGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             TTCCBCSSHHHHHHHHHHTSSC
T ss_pred             ccCcccCCHHHHHHHHHHhcCC
Confidence            8999988899999999999875

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.89  E-value=0.00078  Score=30.42  Aligned_cols=29  Identities=3%  Similarity=-0.027  Sum_probs=24.5

Q ss_pred             CCcccCCCCCCCCCCCCCCCCCcCCCCCCccccccccccCC
Q psy4019          44 HCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASVSS   84 (109)
Q Consensus        44 kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~   84 (109)
                      +.|+|.            .|++.|.....|.-|++.|....
T Consensus         4 r~~~C~------------~C~k~F~s~qALGGH~~~Hr~~r   32 (37)
T d1njqa_           4 RSYTCS------------FCKREFRSAQALGGHMNVHRRDR   32 (37)
T ss_dssp             SSEECT------------TTCCEESSHHHHHHHHHTTCCSC
T ss_pred             CccCCC------------CCCCccCCcccccchHhhhcchH
Confidence            569999            99999999889998988886543

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.88  E-value=0.01  Score=24.35  Aligned_cols=24  Identities=42%  Similarity=0.834  Sum_probs=19.3

Q ss_pred             ccccCCCCCcCCChhHHHHHhhhh
Q psy4019          17 VCGEENCTKRYTDPSSLRKHIKTV   40 (109)
Q Consensus        17 ~C~~~~C~k~f~~~~~l~~H~~~h   40 (109)
                      .|+..+|.+.|...+.+++|+.+|
T Consensus         3 ~CphkgC~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           3 ACPHKGCTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             ECCSTTCCCEESSHHHHHHHHGGG
T ss_pred             cCCcccHHHHhhchHHHHHHhhcc
Confidence            355566999999999999998766

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.72  E-value=0.015  Score=23.73  Aligned_cols=26  Identities=27%  Similarity=0.515  Sum_probs=22.6

Q ss_pred             CcccccCCCCCcCCChhHHHHHhhhhcC
Q psy4019          15 PYVCGEENCTKRYTDPSSLRKHIKTVHG   42 (109)
Q Consensus        15 p~~C~~~~C~k~f~~~~~l~~H~~~h~~   42 (109)
                      |-+|..  |..+......|+.|.|+|..
T Consensus         2 pekc~e--csyscsskaalrvh~rihc~   27 (28)
T d1x5wa1           2 PEKCSE--CSYSCSSKAALRIHERIHCT   27 (28)
T ss_dssp             SEECSS--SSCEESSHHHHHHHHGGGCC
T ss_pred             CccCcc--cccccCcHHHHHHhhccccC
Confidence            567888  99999999999999998753

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.61  E-value=0.01  Score=23.58  Aligned_cols=21  Identities=29%  Similarity=0.972  Sum_probs=19.4

Q ss_pred             CcccccCCCCCcCCChhHHHHHh
Q psy4019          15 PYVCGEENCTKRYTDPSSLRKHI   37 (109)
Q Consensus        15 p~~C~~~~C~k~f~~~~~l~~H~   37 (109)
                      ||+|..  |...|.+...|+.|+
T Consensus         2 pykcss--csqqfmqkkdlqshm   22 (26)
T d2dlqa1           2 PYKCSS--CSQQFMQKKDLQSHM   22 (26)
T ss_dssp             SEECSS--SCCEESSHHHHHHHH
T ss_pred             CCcccH--HHHHHHHHHHHHHHH
Confidence            799998  999999999999886

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.05  E-value=0.017  Score=23.79  Aligned_cols=23  Identities=22%  Similarity=0.476  Sum_probs=18.4

Q ss_pred             ccccCCCCCcCCChhHHHHHhhh
Q psy4019          17 VCGEENCTKRYTDPSSLRKHIKT   39 (109)
Q Consensus        17 ~C~~~~C~k~f~~~~~l~~H~~~   39 (109)
                      .|..++|++.|.....|..|.+.
T Consensus         2 ~cdf~gc~kifsnrqylnhh~ky   24 (30)
T d2dlka1           2 PCDFPGCGRIFSNRQYLNHHKKY   24 (30)
T ss_dssp             ECSSTTTCCEESSHHHHHHHHHH
T ss_pred             CCCCCCchhhhccHHHHHhHHHH
Confidence            36667799999999999888763

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.72  E-value=0.0012  Score=27.43  Aligned_cols=28  Identities=11%  Similarity=0.139  Sum_probs=24.2

Q ss_pred             CCCcccCCCCCCCCCCCCCCCCCcCCCCCCcccccccccc
Q psy4019          43 EHCYANKKHKGMPSKDKDGLGGASPSRSDDMPLSAKTASV   82 (109)
Q Consensus        43 ~kp~~C~~~~~~~~~~~~~~C~~~f~~~~~l~~H~~~~~~   82 (109)
                      +..|.|.            .|...|.++-.|+.|+-.|++
T Consensus         2 eqvftcs------------~cqe~f~rrmelr~hmvshtg   29 (30)
T d2dlqa3           2 EQVFTCS------------VCQETFRRRMELRLHMVSHTG   29 (30)
T ss_dssp             CCCEECS------------SSCCEESSHHHHHHHHHHHSS
T ss_pred             cceEEeH------------HHHHHHHHHHhheeeeecccC
Confidence            4678999            999999999999999988775

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.34  E-value=0.039  Score=25.85  Aligned_cols=26  Identities=35%  Similarity=0.570  Sum_probs=22.7

Q ss_pred             CCcccccCCCCCcCCChhHHHHHhhhhc
Q psy4019          14 KPYVCGEENCTKRYTDPSSLRKHIKTVH   41 (109)
Q Consensus        14 ~p~~C~~~~C~k~f~~~~~l~~H~~~h~   41 (109)
                      .-|.|..  |+|.|....-|+.|...|.
T Consensus         5 ~l~pCG~--CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           5 GILPCGL--CGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCCTT--TCCCCSCHHHHHHHHHHHT
T ss_pred             ceeeccc--cccccCCHHHHhHhHHhcC
Confidence            3578999  9999999999999987774

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=92.58  E-value=0.04  Score=21.83  Aligned_cols=22  Identities=32%  Similarity=0.711  Sum_probs=19.7

Q ss_pred             cccccCCCCCcCCChhHHHHHhhh
Q psy4019          16 YVCGEENCTKRYTDPSSLRKHIKT   39 (109)
Q Consensus        16 ~~C~~~~C~k~f~~~~~l~~H~~~   39 (109)
                      |.|+.  |-+.|....++..|.++
T Consensus         2 ypcp~--cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPF--CFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTT--TCCEESCHHHHHHHHHH
T ss_pred             cCCch--hhHHhccccCceEEEEE
Confidence            67998  99999999999999875

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.56  E-value=0.061  Score=23.18  Aligned_cols=26  Identities=27%  Similarity=0.782  Sum_probs=21.9

Q ss_pred             CcccccCCCCCcCCChhHHHHHhhhhcC
Q psy4019          15 PYVCGEENCTKRYTDPSSLRKHIKTVHG   42 (109)
Q Consensus        15 p~~C~~~~C~k~f~~~~~l~~H~~~h~~   42 (109)
                      .|.|..  |+++|.....+.+|....+|
T Consensus         4 afvcsk--cgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSK--CGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSS--SCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecc--cccchhcchHHHHHhhhcCC
Confidence            588998  99999999999999765554

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=89.81  E-value=0.19  Score=23.32  Aligned_cols=29  Identities=28%  Similarity=0.582  Sum_probs=24.5

Q ss_pred             CCCCCcccccCCCCCcCCChhHHHHHhhhhc
Q psy4019          11 SSQKPYVCGEENCTKRYTDPSSLRKHIKTVH   41 (109)
Q Consensus        11 ~~~~p~~C~~~~C~k~f~~~~~l~~H~~~h~   41 (109)
                      ..++|-.|+.  |+....++.+|.+|...-.
T Consensus        20 ~s~qpatcpi--c~avirqsrnlrrhlel~h   48 (54)
T d1yuja_          20 QSEQPATCPI--CYAVIRQSRNLRRHLELRH   48 (54)
T ss_dssp             TTSCCEECTT--TCCEESSHHHHHHHHHHHT
T ss_pred             cccCCCCCch--HHHHHHHHHHHHHHHHHHh
Confidence            3467889999  9999999999999987643

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=86.26  E-value=0.31  Score=20.62  Aligned_cols=23  Identities=26%  Similarity=0.664  Sum_probs=20.0

Q ss_pred             CCcccccCCCCCcCCChhHHHHHhh
Q psy4019          14 KPYVCGEENCTKRYTDPSSLRKHIK   38 (109)
Q Consensus        14 ~p~~C~~~~C~k~f~~~~~l~~H~~   38 (109)
                      ..|.|.-  ||-.|...+.|..|+.
T Consensus         7 arf~c~p--cgirfss~stleahqt   29 (36)
T d1y0jb1           7 ARFMCLP--CGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCCBCTT--TCCBCSCHHHHHHHTT
T ss_pred             cceeccc--cceeecChhHHHhhhh
Confidence            3588988  9999999999999974

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.13  E-value=0.094  Score=26.50  Aligned_cols=24  Identities=21%  Similarity=0.591  Sum_probs=21.2

Q ss_pred             CCcccccCCCCCcCCChhHHHHHhhh
Q psy4019          14 KPYVCGEENCTKRYTDPSSLRKHIKT   39 (109)
Q Consensus        14 ~p~~C~~~~C~k~f~~~~~l~~H~~~   39 (109)
                      ..|-|..  |++.|.....|..|++.
T Consensus        14 gqfYCv~--C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          14 GLHRCLA--CARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             GCSEETT--TTEECSSHHHHHHHTTC
T ss_pred             CEEeccc--ccCccCCHHHHHHHHcc
Confidence            4588999  99999999999999864

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.55  E-value=0.25  Score=19.88  Aligned_cols=23  Identities=22%  Similarity=0.537  Sum_probs=19.9

Q ss_pred             CcccccCCCCCcCCChhHHHHHhhh
Q psy4019          15 PYVCGEENCTKRYTDPSSLRKHIKT   39 (109)
Q Consensus        15 p~~C~~~~C~k~f~~~~~l~~H~~~   39 (109)
                      .|.|+.  |+-....++.|..|++.
T Consensus         2 k~qcph--c~tiiarksdlrvhlrn   24 (28)
T d2ct1a1           2 KFHCPH--CDTVIARKSDLGVHLRK   24 (28)
T ss_dssp             SEECSS--SSCEESSHHHHHHHHHH
T ss_pred             CccCCc--chhheeehhhhhHHhhh
Confidence            378999  99999999999999874

>d1x3ca1 g.37.1.1 (A:8-68) Zinc finger protein 292, ZNF292 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 292, ZNF292
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.95  E-value=1.5  Score=20.64  Aligned_cols=32  Identities=22%  Similarity=0.485  Sum_probs=25.5

Q ss_pred             CCCCcccccCCCCCcCCChhHHHHHhh-hhcCC
Q psy4019          12 SQKPYVCGEENCTKRYTDPSSLRKHIK-TVHGE   43 (109)
Q Consensus        12 ~~~p~~C~~~~C~k~f~~~~~l~~H~~-~h~~~   43 (109)
                      .-+||.|...+|..+|.-..+|.-|-+ +|...
T Consensus        17 pyrpyrcvhqgc~aaftiq~nlilhy~avh~s~   49 (61)
T d1x3ca1          17 PYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSD   49 (61)
T ss_dssp             SSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSC
T ss_pred             CCCceeeeccchhhhhhhhhhHHHHHHHHhhhc
Confidence            457899998889999999999998866 45543

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=80.38  E-value=0.65  Score=18.86  Aligned_cols=24  Identities=25%  Similarity=0.815  Sum_probs=19.1

Q ss_pred             CcccccCCCCCcCCChhHHHHHhh
Q psy4019          15 PYVCGEENCTKRYTDPSSLRKHIK   38 (109)
Q Consensus        15 p~~C~~~~C~k~f~~~~~l~~H~~   38 (109)
                      .|.|..-+|.-.|....++.+|..
T Consensus         2 nf~cdsd~cdl~fttkanmkkhfn   25 (31)
T d1tf3a3           2 NFTCDSDGCDLRFTTKANMKKHFN   25 (31)
T ss_dssp             CEECSSSSCCCEESSHHHHHHHHH
T ss_pred             CccccCCCcceEEeehHHHHHHHh
Confidence            467776669999999999998864