Psyllid ID: psy4157

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-
Protein Sequence
MSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTSVDALQKLRPVFQKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQARNIQPLARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATSGGIANRRQER
Secondary Structure (PSIPRED)
ccccccccccccccccccccccHHHHccccccccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcccccccEEcEEcccccccEEEcccccccccccHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHccccccccccccEEEHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEccccccccccccccccccccccccccccHHHHccccccccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcccccccEEcEEcccccccEEEcccccccccccHHHHcccccccccccccccccccccHHHHHHHHHccHHHHHHccccccEEEEEEEcccccccccccccHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
cccccEEEccccccccccEEEEEHHHHHHHEccccccEHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHcccccccEccEEEccccccEEEcccccccccccHHHHHccccccccccccccccEcccEEEEEEEEEHHHHccccEEEcccccccccccHHHHHccccccccccccccccEcccEEEEEEEEEEEHHHHHHccccccEEEHHHcccccEEEEEEEEEcccccEEEccccccccccEEEEEHHHHHHHEccccccEHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHcccccccEccEEEccccccEEEcccccccccccHHHHHccccccccccccccccEcccEEEEEEEEEEEHHHHHHccccccEEEEEEEEEEccHHHHHHcHHHHHHHHHHHHcccHHHccEEHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
msqaphvinirngiklndaemkdsmvfdgltdafHNIHMGITAENIAKKWSISRLEQDEYAYQSQVKTakaqeggyfdeeiVPVVISTrkgdvvvakdeypkantsvdALQKlrpvfqkdgtvtagnasgindgaaAGKLYLFtrkgdvvvakdeypkantTVEALQKLrpvfqkdgtvtagnasginDGAAAVLLMSYKRAQARNIQPLARIAIKsgdataivaggqecmsqaphvinirngiklndaemkdsmvfdgltdafHNIHMGITAENIAKKWSISRLEQDEYAYQSQVKTakaqeggyfdeeiVPVVISTrkgdvvvakdeypkantTVEALQKLrpvfqkdgtvtagnasginDGAAAVLLMSYKTAQARNIQPLARIVAMSsagveptlmgtgpipaVNAVLAKagwskeevgyfnrvatsggianrrqer
Flexible Loop (DISEMBL)
msqaphvinirngiklndaEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEYAYQSQVKtakaqeggyfdeeivpvvISTRKGDVVVAKdeypkantsvdalqklrpvfqkdgtvtagnasgindGAAAGKLYLFTRKGDVVVAKDeypkanttvealqklrpvfqkdgtvtagnasgiNDGAAAVLLMSYKRAQARNIQPLARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEYAYQSQVKtakaqeggyfdeeivpvvISTRKGdvvvakdeypkanttvealqklrpvfqkdgtvtagnasgiNDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGwskeevgyfnrvatsggianrrqer
Low Complexity Region (SEG)
MSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTSVDALQKLRPVFQKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQARNIQPLARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATSGGIANRRQER
Disordered region (IsUnstruct)
******VINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTSVDALQKLRPVFQKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQARNIQPLARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVAT***********
Disordered Region (DISOPRED)
MSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTSVDALQKLRPVFQKDGTVTAGNASGINDGAAAGKLYLFTRKG*VVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQARNIQPLARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATSGGIANRRQE*
Disordered Region (DISEMBL)
MSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTSVDALQKLRPVFQKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQARNIQPLARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATSGGIANRRQER
Disordered Region (DISPRO)
**QAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTSVDALQKLRPVFQKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQARNIQPLARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATSGGIANRRQER
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTSVDALQKLRPVFQKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQARNIQPLARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATSGGIANRRQER
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	441	2.2.26 [Sep-21-2011]
P50174	393	Acetyl-CoA acetyltransfer	yes	N/A	0.505	0.567	0.561	1e-67
Q9BWD1	397	Acetyl-CoA acetyltransfer	yes	N/A	0.489	0.544	0.555	2e-66
Q8CAY6	397	Acetyl-CoA acetyltransfer	yes	N/A	0.489	0.544	0.550	1e-65
Q5XI22	397	Acetyl-CoA acetyltransfer	yes	N/A	0.489	0.544	0.545	5e-65
P07097	392	Acetyl-CoA acetyltransfer	N/A	N/A	0.539	0.607	0.508	3e-63
P54810	391	Acetyl-CoA acetyltransfer	no	N/A	0.455	0.514	0.577	2e-61
P45369	394	Acetyl-CoA acetyltransfer	yes	N/A	0.482	0.540	0.539	7e-61
P44873	393	Acetyl-CoA acetyltransfer	yes	N/A	0.473	0.531	0.521	3e-60
P45359	392	Acetyl-CoA acetyltransfer	yes	N/A	0.492	0.553	0.529	4e-60
Q18AR0	391	Acetyl-CoA acetyltransfer	yes	N/A	0.471	0.531	0.559	1e-59

>sp|P50174|THIL_RHIME Acetyl-CoA acetyltransferase OS=Rhizobium meliloti (strain 1021) GN=phbA PE=3 SV=1

 Score =  257 bits (657), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 128/228 (56%), Positives = 163/228 (71%), Gaps = 5/228 (2%)

Query: 195 LLMSYKRAQARNIQPLARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDS 254
           L  S  RA A  +Q +A     +GDA  IVAGG E MS APH  ++R G+K+ D +M D+
Sbjct: 89  LCGSGLRAVALGMQQIA-----TGDAKVIVAGGMESMSMAPHCAHLRGGVKMGDYKMIDT 143

Query: 255 MVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPV 314
           M+ DGLTDAF+  HMGITAEN+A+KW ++R EQDE+A  SQ K   AQ+ G F +EIVP 
Sbjct: 144 MIKDGLTDAFYGYHMGITAENVARKWQLTREEQDEFALASQNKAEAAQKAGRFADEIVPF 203

Query: 315 VISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYK 374
           V+ TRKGDV V +DEY +   T++++ KLRP F K+GTVTAGNASG+NDGAAA LLM+  
Sbjct: 204 VVKTRKGDVNVDQDEYIRHGATLDSIAKLRPAFDKEGTVTAGNASGLNDGAAAALLMTEA 263

Query: 375 TAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEV 422
            A  R IQPLARIV+ ++AGV+P +MGTGPIPA    L KAGWS  ++
Sbjct: 264 EAARRGIQPLARIVSWATAGVDPQIMGTGPIPASRKALEKAGWSVADI 311

Rhizobium meliloti (strain 1021) (taxid: 266834)
EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: 9

>sp|Q9BWD1|THIC_HUMAN Acetyl-CoA acetyltransferase, cytosolic OS=Homo sapiens GN=ACAT2 PE=1 SV=2

 Score =  253 bits (646), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 121/218 (55%), Positives = 159/218 (72%), Gaps = 2/218 (0%)

Query: 210 LARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHM 269
           LA  +I  GD++ +VAGG E MS+APH+  +R G+K+ +  + DS++ DGLTDAFHN HM
Sbjct: 101 LAVQSIGIGDSSIVVAGGMENMSKAPHLAYLRTGVKIGEMPLTDSILCDGLTDAFHNCHM 160

Query: 270 GITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDE 329
           GITAEN+AKKW +SR +QD+ A  SQ +T  AQ+ G+FD+EIVPV++STRKG + V  DE
Sbjct: 161 GITAENVAKKWQVSREDQDKVAVLSQNRTENAQKAGHFDKEIVPVLVSTRKGLIEVKTDE 220

Query: 330 YPKANTTVEALQKLRPVFQKD--GTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARI 387
           +P+  + +EA+ KL+P F  D  GTVT  NASGINDGAAAV+LM    A  R + PLARI
Sbjct: 221 FPRHGSNIEAMSKLKPYFLTDGTGTVTPANASGINDGAAAVVLMKKSEADKRGLTPLARI 280

Query: 388 VAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYF 425
           V+ S  GVEP++MG GPIPA+   + KAGWS E+V  F
Sbjct: 281 VSWSQVGVEPSIMGIGPIPAIKQAVTKAGWSLEDVDIF 318

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 9

>sp|Q8CAY6|THIC_MOUSE Acetyl-CoA acetyltransferase, cytosolic OS=Mus musculus GN=Acat2 PE=1 SV=2

 Score =  251 bits (640), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 120/218 (55%), Positives = 161/218 (73%), Gaps = 2/218 (0%)

Query: 210 LARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHM 269
           LA  +I  GD+T +VAGG E MS+APH+ ++R G+++ +  + DS++ DGLTDAFHN HM
Sbjct: 101 LAAQSIAMGDSTIVVAGGMENMSKAPHLTHLRTGVRMGEVPLADSILCDGLTDAFHNYHM 160

Query: 270 GITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDE 329
           GITAEN+AKKW +SR  QD+ A  SQ +   AQ+ G+FD+EIVPV++S+RKG   V  DE
Sbjct: 161 GITAENVAKKWQVSREAQDKVAVLSQNRAEHAQKAGHFDKEIVPVLVSSRKGLTEVKIDE 220

Query: 330 YPKANTTVEALQKLRPVFQKD--GTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARI 387
           +P+  + +EA+ KL+P F  D  GTVT  NASG+NDGAAAV+LM    A+ R ++PLARI
Sbjct: 221 FPRHGSNLEAMGKLKPYFLTDGTGTVTPANASGMNDGAAAVVLMKKTEAERRMLKPLARI 280

Query: 388 VAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYF 425
           V+ S AGVEP++MG GPIPA+   +AKAGWS E+V  F
Sbjct: 281 VSWSQAGVEPSVMGVGPIPAIKQAVAKAGWSLEDVDLF 318

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 9

>sp|Q5XI22|THIC_RAT Acetyl-CoA acetyltransferase, cytosolic OS=Rattus norvegicus GN=Acat2 PE=1 SV=1

 Score =  248 bits (634), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 119/218 (54%), Positives = 162/218 (74%), Gaps = 2/218 (0%)

Query: 210 LARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHM 269
           LA  +I  GD+T +VAGG E MS+APH+ ++R+G+K+ +  + DS++ DGLTDAFHN HM
Sbjct: 101 LAAQSIAMGDSTIVVAGGMENMSKAPHLAHLRSGVKMGEVPLADSILCDGLTDAFHNYHM 160

Query: 270 GITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDE 329
           GITAEN+AKKW +SR  QD+ A  SQ +   AQ+ G+FD+EIVPV +S+RKG   V  DE
Sbjct: 161 GITAENVAKKWQVSREAQDKVAVVSQNRAEHAQKAGHFDKEIVPVHVSSRKGLTEVKIDE 220

Query: 330 YPKANTTVEALQKLRPVFQKD--GTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARI 387
           +P+  + +EA+ KL+P F  D  GTVT  NASG+NDGAAAV+LM    A++R ++PLA++
Sbjct: 221 FPRHGSNLEAMSKLKPYFLTDGTGTVTPANASGMNDGAAAVVLMKKTEAESRMLKPLAQV 280

Query: 388 VAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYF 425
           V+ S AGVEP++MG GPIPA+   +AKAGWS E+V  F
Sbjct: 281 VSWSQAGVEPSVMGVGPIPAIKQAVAKAGWSLEDVDVF 318

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 9

>sp|P07097|THIL_ZOORA Acetyl-CoA acetyltransferase OS=Zoogloea ramigera GN=phbA PE=1 SV=4

 Score =  243 bits (619), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 126/248 (50%), Positives = 161/248 (64%), Gaps = 10/248 (4%)

Query: 170 RPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQARNIQPLARIAIKSGDATAIVAGGQE 229
           R    K G      A G+N      L  S  RA A  +Q +A     +GDA+ IVAGG E
Sbjct: 68  RQAAMKAGVPQEATAWGMNQ-----LCGSGLRAVALGMQQIA-----TGDASIIVAGGME 117

Query: 230 CMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDE 289
            MS APH  ++  G+K+ D +M D+M+ DGLTDAF+  HMG TAEN+AK+W +SR EQD 
Sbjct: 118 SMSMAPHCAHLAGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDA 177

Query: 290 YAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQK 349
           +A  SQ K   AQ+ G F +EIVP ++  RKGD+ V  DEY +   T++++ KLRP F K
Sbjct: 178 FAVASQNKAEAAQKDGRFKDEIVPFIVKGRKGDITVDADEYIRHGATLDSMAKLRPAFDK 237

Query: 350 DGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVN 409
           +GTVTAGNASG+NDGAAA LLMS   A  R IQPL RIV+ ++ GV+P +MGTGPIPA  
Sbjct: 238 EGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDPKVMGTGPIPASR 297

Query: 410 AVLAKAGW 417
             L +AGW
Sbjct: 298 KALERAGW 305

Zoogloea ramigera (taxid: 350)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 9

>sp|P54810|THIL_PARDE Acetyl-CoA acetyltransferase OS=Paracoccus denitrificans GN=phaA PE=3 SV=1

 Score =  236 bits (603), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 116/201 (57%), Positives = 145/201 (72%)

Query: 218 GDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIA 277
           GDA  +VAGGQE MS APH   I  G K+ D +M D+M+ DGL DAF++ HMG TAEN+A
Sbjct: 105 GDARIVVAGGQESMSLAPHAAYIAPGQKMGDMKMLDTMIKDGLWDAFNDYHMGTTAENVA 164

Query: 278 KKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTV 337
            KW ISR EQD++A  SQ K   AQ+ G F +EIVPV I +RKG+ VV  DEY +   T+
Sbjct: 165 GKWEISRAEQDQFAVASQNKAEAAQKAGKFADEIVPVTIKSRKGETVVDADEYIRHGATL 224

Query: 338 EALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEP 397
           EA++ +RP F K+GTVTAGNASG+NDGAAAVL+M+   A  R + PLARI + ++AGV+P
Sbjct: 225 EAMENVRPAFSKEGTVTAGNASGLNDGAAAVLVMTEDEAARRGLTPLARIASYATAGVDP 284

Query: 398 TLMGTGPIPAVNAVLAKAGWS 418
            +MGTGPIPA    L KAGWS
Sbjct: 285 QIMGTGPIPASRKALEKAGWS 305

Paracoccus denitrificans (taxid: 266)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 9

>sp|P45369|THIL_ALLVD Acetyl-CoA acetyltransferase OS=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / D) GN=phbA PE=3 SV=2

 Score =  234 bits (598), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 116/215 (53%), Positives = 153/215 (71%), Gaps = 2/215 (0%)

Query: 210 LARIAIKSGDATAIVAGGQECMSQAPHVI-NIRNGIKLNDAEMKDSMVFDGLTDAFHNIH 268
           LA  AI  GDA  ++AGGQE MSQ+ HV+   R+G ++ D  MKD+M+ DGL DAF+N H
Sbjct: 98  LAMQAIACGDADIVIAGGQESMSQSSHVLPRSRDGQRMGDWSMKDTMIVDGLWDAFNNYH 157

Query: 269 MGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDV-VVAK 327
           MG TAENIA+K+  +R +QD +A  SQ KT  AQ+ G F +EI+P+ I  RKGD  V   
Sbjct: 158 MGTTAENIAQKYGFTREQQDAFAAASQQKTEAAQKAGRFQDEIIPIEIPQRKGDPKVFDA 217

Query: 328 DEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARI 387
           DE+P+  TT E+L KLRP F +DG+VTAGNASGINDGAA V++M    A+   ++P+AR+
Sbjct: 218 DEFPRHGTTAESLGKLRPAFSRDGSVTAGNASGINDGAAMVVVMKESKAKELGLKPMARL 277

Query: 388 VAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEV 422
           VA +SAGV+P +MGTGPIPA    L KAGW+  ++
Sbjct: 278 VAFASAGVDPAIMGTGPIPASTKCLEKAGWTPADL 312

Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / D) (taxid: 572477)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 9

>sp|P44873|ATOB_HAEIN Acetyl-CoA acetyltransferase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=atoB PE=3 SV=1

 Score =  233 bits (593), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 110/211 (52%), Positives = 161/211 (76%), Gaps = 2/211 (0%)

Query: 214 AIKSGDATAIVAGGQECMSQAPHVIN--IRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGI 271
           +I SGDA  +V GG E MSQAP++++  +R G+K+ +  ++D+M+ DGLT A ++ HMGI
Sbjct: 101 SIISGDADIVVVGGMENMSQAPYLLDSKVRQGVKMGNLTLRDTMIEDGLTCASNHYHMGI 160

Query: 272 TAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYP 331
           TAENIA+++ ISR  QDE A +SQ   ++A + G FD+EIVPV++ TRKGD++V++DEYP
Sbjct: 161 TAENIAEQYGISRQAQDELALRSQTLASQAVQLGVFDKEIVPVMVKTRKGDIIVSRDEYP 220

Query: 332 KANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMS 391
           KA+TT E L KL+P F+K+GTVTAGNASGINDGAAA++L+S   A A  ++ +A+I + +
Sbjct: 221 KADTTAEGLAKLKPAFKKEGTVTAGNASGINDGAAALILVSESKAHALGLKAIAKIRSYA 280

Query: 392 SAGVEPTLMGTGPIPAVNAVLAKAGWSKEEV 422
           S GV+P++MG GP+PA    L KAG + +++
Sbjct: 281 SGGVDPSVMGLGPVPATQKALKKAGINLDDI 311

Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) (taxid: 71421)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 9

>sp|P45359|THLA_CLOAB Acetyl-CoA acetyltransferase OS=Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) GN=thlA PE=1 SV=1

 Score =  232 bits (592), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 116/219 (52%), Positives = 160/219 (73%), Gaps = 2/219 (0%)

Query: 205 RNIQPLARIAIKSGDATAIVAGGQECMSQAPHVIN-IRNGIKLNDAEMKDSMVFDGLTDA 263
           R +   A+I IK+GDA  I+AGG E MS+AP++ N  R G ++ +A+  D M+ DGL DA
Sbjct: 93  RTVSLAAQI-IKAGDADVIIAGGMENMSRAPYLANNARWGYRMGNAKFVDEMITDGLWDA 151

Query: 264 FHNIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDV 323
           F++ HMGITAENIA++W+ISR EQDE+A  SQ K  +A + G F +EIVPVVI  RKG+ 
Sbjct: 152 FNDYHMGITAENIAERWNISREEQDEFALASQKKAEEAIKSGQFKDEIVPVVIKGRKGET 211

Query: 324 VVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKTAQARNIQP 383
           VV  DE+P+  +T+E L KL+P F+KDGTVTAGNASG+ND AA +++MS + A+   ++P
Sbjct: 212 VVDTDEHPRFGSTIEGLAKLKPAFKKDGTVTAGNASGLNDCAAVLVIMSAEKAKELGVKP 271

Query: 384 LARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEV 422
           LA+IV+  SAGV+P +MG GP  A  A + KAGW+ +E+
Sbjct: 272 LAKIVSYGSAGVDPAIMGYGPFYATKAAIEKAGWTVDEL 310

Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) (taxid: 272562)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 9

>sp|Q18AR0|THLA_CLOD6 Acetyl-CoA acetyltransferase OS=Clostridium difficile (strain 630) GN=thlA PE=1 SV=1

 Score =  231 bits (588), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 117/209 (55%), Positives = 150/209 (71%), Gaps = 1/209 (0%)

Query: 215 IKSGDATAIVAGGQECMSQAPHVI-NIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITA 273
           I  GDA  ++ GG E MS +P+++ + R G ++ DA   DSM+ DGL+D F+N HMGITA
Sbjct: 102 IALGDADIMLVGGAENMSMSPYLVPSARYGARMGDAAFVDSMIKDGLSDIFNNYHMGITA 161

Query: 274 ENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKA 333
           ENIA++W+I+R EQDE A  SQ K  KAQ  G FDEEIVPVVI  RKGD VV KDEY K 
Sbjct: 162 ENIAEQWNITREEQDELALASQNKAEKAQAEGKFDEEIVPVVIKGRKGDTVVDKDEYIKP 221

Query: 334 NTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSA 393
            TT+E L KLRP F+KDGTVTAGNASGINDGAA +++M+ + A+   I+PLA IV+  +A
Sbjct: 222 GTTMEKLAKLRPAFKKDGTVTAGNASGINDGAAMLVVMAKEKAEELGIEPLATIVSYGTA 281

Query: 394 GVEPTLMGTGPIPAVNAVLAKAGWSKEEV 422
           GV+P +MG GP+PA    L  A  + E++
Sbjct: 282 GVDPKIMGYGPVPATKKALEAANMTIEDI 310

Clostridium difficile (strain 630) (taxid: 272563)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 9

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	441
156548948	394	PREDICTED: acetyl-CoA acetyltransferase,	0.480	0.538	0.603	1e-70
288959154	391	acetyl-CoA C-acetyltransferase [Azospiri	0.469	0.529	0.612	1e-70
380026455	396	PREDICTED: acetyl-CoA acetyltransferase,	0.482	0.537	0.607	3e-70
374292777	391	Acetyl-CoA acetyltransferase with thiola	0.521	0.588	0.575	4e-70
260782216	394	hypothetical protein BRAFLDRAFT_109688 [	0.480	0.538	0.574	6e-70
260823516	324	hypothetical protein BRAFLDRAFT_211236 [	0.480	0.654	0.574	6e-70
443702200	394	hypothetical protein CAPTEDRAFT_145800 [	0.512	0.573	0.562	2e-69
306841486	394	acetyl-CoA acetyltransferase [Brucella s	0.496	0.555	0.598	3e-69
265984783	394	acetyl-CoA acetyltransferase [Brucella s	0.496	0.555	0.598	4e-69
23502628	394	acetyl-CoA acetyltransferase [Brucella s	0.496	0.555	0.598	5e-69

>gi|156548948|ref|XP_001607032.1| PREDICTED: acetyl-CoA acetyltransferase, cytosolic-like [Nasonia vitripennis]

 Score =  273 bits (699), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 128/212 (60%), Positives = 166/212 (78%)

Query: 214 AIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITA 273
           AIKSG++  IVAGGQE MS+APH I++R+G+K+ DA M D+M+ DGLTD F+NIHMG+TA
Sbjct: 104 AIKSGESEVIVAGGQESMSKAPHAIHLRDGVKMGDATMVDTMLVDGLTDVFNNIHMGVTA 163

Query: 274 ENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKA 333
           EN+AKK++ISR EQDE+A +SQ K   A   GYFD+EI+PV ++ R+   +V+KDE+PK 
Sbjct: 164 ENLAKKYAISREEQDEFAARSQHKAEIAMTKGYFDKEIIPVPVTIRRKTTIVSKDEFPKP 223

Query: 334 NTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSA 393
            TT + L  L+PVF KDGTVT GNASGINDGAAAV+LMS +TA  + ++P+ARIVAM+  
Sbjct: 224 GTTAKDLAGLKPVFVKDGTVTPGNASGINDGAAAVVLMSSETATKKGLKPMARIVAMTVV 283

Query: 394 GVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYF 425
           G+EP +MG GP+PAV  +L KA W KEEV  F
Sbjct: 284 GLEPDIMGYGPVPAVELLLKKAQWKKEEVDLF 315

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|288959154|ref|YP_003449495.1| acetyl-CoA C-acetyltransferase [Azospirillum sp. B510] gi|288911462|dbj|BAI72951.1| acetyl-CoA C-acetyltransferase [Azospirillum sp. B510]

 Score =  273 bits (698), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 128/209 (61%), Positives = 161/209 (77%)

Query: 214 AIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITA 273
           AIK+GDA  +V GGQE MS APHV+++RNG K+  AE+ D+M+ DGLTDAFH  HMG TA
Sbjct: 101 AIKNGDADILVVGGQESMSMAPHVMHLRNGTKMGSAELLDTMLRDGLTDAFHGYHMGTTA 160

Query: 274 ENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKA 333
           EN+A+KW ++R EQD +A  SQ K   AQ+ G F +EIVPV I  RKGDVVV++DEYPK 
Sbjct: 161 ENVAQKWQLTRQEQDAFAAASQQKAEAAQKAGRFKDEIVPVTIKGRKGDVVVSEDEYPKH 220

Query: 334 NTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSA 393
            TT E+L KLRP F KDGTVTAGNASGINDGAAA++LM+ + A  R + PLARIV+ ++A
Sbjct: 221 GTTAESLAKLRPAFSKDGTVTAGNASGINDGAAALVLMTAENAAKRGVTPLARIVSWATA 280

Query: 394 GVEPTLMGTGPIPAVNAVLAKAGWSKEEV 422
           GV+P +MGTGPIPA    L KAGW+ +++
Sbjct: 281 GVDPAIMGTGPIPASRKALEKAGWTVDDL 309

Source: Azospirillum sp. B510

Species: Azospirillum lipoferum

Genus: Azospirillum

Family: Rhodospirillaceae

Order: Rhodospirillales

Class: Alphaproteobacteria

Phylum: Proteobacteria

Superkingdom: Bacteria

>gi|380026455|ref|XP_003696967.1| PREDICTED: acetyl-CoA acetyltransferase, cytosolic-like [Apis florea]

 Score =  271 bits (694), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 130/214 (60%), Positives = 164/214 (76%), Gaps = 1/214 (0%)

Query: 213 IAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGIT 272
           ++IK+G++  +VAGGQE MSQ+ H I  RNG+K+ D  + D+++FDGLTDAFH IHMGIT
Sbjct: 104 MSIKTGESQIVVAGGQESMSQSAHAIQFRNGVKIGDCRLIDTLIFDGLTDAFHGIHMGIT 163

Query: 273 AENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPK 332
           AEN++K ++ISR EQDEYA +SQ K   A   GYF +EI+PV +ST K  V+V KDEYPK
Sbjct: 164 AENVSKDFNISRNEQDEYAVKSQQKAEAAITKGYFKKEIIPVTLSTEKESVIVDKDEYPK 223

Query: 333 ANTTVEALQKLRPVFQK-DGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMS 391
             TT+E LQKL+P F K +GTVTAGNASGINDGAAAV+LMS   A+ + + PLA+IVAM+
Sbjct: 224 FGTTIEDLQKLKPAFLKAEGTVTAGNASGINDGAAAVVLMSADIAKQKGLSPLAKIVAMA 283

Query: 392 SAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYF 425
             GVEP +MG GPIPAV  VL KA W+KEEV  +
Sbjct: 284 QVGVEPRIMGIGPIPAVELVLQKAKWTKEEVDLY 317

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|374292777|ref|YP_005039812.1| Acetyl-CoA acetyltransferase with thiolase domain (Acetoacetyl-CoA thiolase) [Azospirillum lipoferum 4B] gi|357424716|emb|CBS87595.1| Acetyl-CoA acetyltransferase with thiolase domain (Acetoacetyl-CoA thiolase) [Azospirillum lipoferum 4B]

 Score =  271 bits (693), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 138/240 (57%), Positives = 170/240 (70%), Gaps = 10/240 (4%)

Query: 183 NASGINDGAAAVLLMSYKRAQARNIQPLARIAIKSGDATAIVAGGQECMSQAPHVINIRN 242
            A GIN      L  S  RA A   Q     AIK+GDA  +V GGQE MS APHV+++RN
Sbjct: 80  TAMGINQ-----LCGSGLRAVALGYQ-----AIKNGDADVLVVGGQESMSMAPHVMHLRN 129

Query: 243 GIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQ 302
           G K+  AE+ D+M+ DGLTDAFH  HMG TAEN+A+KW ++R EQD +A  SQ K   AQ
Sbjct: 130 GTKMGSAELLDTMLRDGLTDAFHGYHMGTTAENVAQKWQLTREEQDAFAAASQQKAEAAQ 189

Query: 303 EGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGIN 362
           + G F +EIVPV I  RKGDVVV+ DEYPK  TT E+L KLRP F KDGTVTAGNASGIN
Sbjct: 190 KAGRFKDEIVPVTIKGRKGDVVVSDDEYPKHGTTPESLAKLRPAFSKDGTVTAGNASGIN 249

Query: 363 DGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEV 422
           DGAAA++LM+ + A  R + PLARIV+ ++AGV+P +MGTGPIPA    L KAGW+ +++
Sbjct: 250 DGAAALVLMTAENAAKRGVTPLARIVSWATAGVDPAIMGTGPIPASRKALEKAGWTVDDL 309

Source: Azospirillum lipoferum 4B

Species: Azospirillum lipoferum

Genus: Azospirillum

Family: Rhodospirillaceae

Order: Rhodospirillales

Class: Alphaproteobacteria

Phylum: Proteobacteria

Superkingdom: Bacteria

>gi|260782216|ref|XP_002586186.1| hypothetical protein BRAFLDRAFT_109688 [Branchiostoma floridae] gi|229271281|gb|EEN42197.1| hypothetical protein BRAFLDRAFT_109688 [Branchiostoma floridae]

 Score =  271 bits (692), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 123/214 (57%), Positives = 166/214 (77%), Gaps = 2/214 (0%)

Query: 214 AIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITA 273
           AI++GDA+ +VAGGQE MS+APH +++R+G+K  D  + D+M+ DGL DAF+N HMGITA
Sbjct: 102 AIRNGDASVVVAGGQESMSKAPHCVHMRSGVKFGDVHLVDTMLSDGLMDAFNNYHMGITA 161

Query: 274 ENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKA 333
           EN+AK+W +SR EQD++A +SQ++T +AQ+ G+F +EI PV +++RKG V V  DEYP+ 
Sbjct: 162 ENVAKQWGVSREEQDKFALESQLRTEQAQKEGHFSQEITPVTVTSRKGSVEVKVDEYPRP 221

Query: 334 NTTVEALQKLRPVFQKD--GTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMS 391
              +E + KLRP F KD  GTVTAGNASGINDGAA V+LMS   AQAR + PLAR+V+ +
Sbjct: 222 GCVLEGMTKLRPAFVKDGTGTVTAGNASGINDGAAVVVLMSESEAQARGVTPLARVVSWA 281

Query: 392 SAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYF 425
            AGV+P++MGTGPIPA+   L KA W+K+EV  F
Sbjct: 282 QAGVDPSIMGTGPIPAIRKALEKAKWTKDEVDLF 315

Source: Branchiostoma floridae

Species: Branchiostoma floridae

Genus: Branchiostoma

Family: Branchiostomidae

Phylum: Chordata

Superkingdom: Eukaryota

>gi|260823516|ref|XP_002604229.1| hypothetical protein BRAFLDRAFT_211236 [Branchiostoma floridae] gi|229289554|gb|EEN60240.1| hypothetical protein BRAFLDRAFT_211236 [Branchiostoma floridae]

 Score =  271 bits (692), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 123/214 (57%), Positives = 164/214 (76%), Gaps = 2/214 (0%)

Query: 214 AIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITA 273
           AI+SGDA+ +VAGGQE MS+APH +++R+G+K  D  + D+M+ DGL DAF+N HMGITA
Sbjct: 101 AIRSGDASVVVAGGQESMSKAPHCVHMRSGVKFGDVHLVDTMLSDGLMDAFNNYHMGITA 160

Query: 274 ENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKA 333
           EN+AK+W +SR EQD++A +SQ++T +AQ+ G+F  EI PV +++RKG V V  DEYP+ 
Sbjct: 161 ENVAKQWGVSREEQDKFALESQLRTEQAQKEGHFSREITPVTVTSRKGSVEVKVDEYPRP 220

Query: 334 NTTVEALQKLRPVFQKD--GTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMS 391
              +E + KLRP F KD  GTVTAGNASGINDGAA V+LMS   AQ R + PLAR+V+ +
Sbjct: 221 GCVLEGMTKLRPAFVKDGTGTVTAGNASGINDGAAVVVLMSESEAQTRGVTPLARVVSWA 280

Query: 392 SAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYF 425
            AGV+P++MGTGPIPA+   L KA W+K+EV  F
Sbjct: 281 QAGVDPSIMGTGPIPAIRKALEKAKWTKDEVDLF 314

Source: Branchiostoma floridae

Species: Branchiostoma floridae

Genus: Branchiostoma

Family: Branchiostomidae

Phylum: Chordata

Superkingdom: Eukaryota

>gi|443702200|gb|ELU00361.1| hypothetical protein CAPTEDRAFT_145800 [Capitella teleta]

 Score =  269 bits (688), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 131/233 (56%), Positives = 168/233 (72%), Gaps = 7/233 (3%)

Query: 195 LLMSYKRAQARNIQPLARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDS 254
           L  S  RA A  +Q     A+K  DA  +VAGGQECMS+APH +++RNGIK  D  + DS
Sbjct: 88  LCGSGLRAVALGMQ-----ALKLNDADVVVAGGQECMSKAPHTMHMRNGIKFGDVSLSDS 142

Query: 255 MVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPV 314
           M+ DGL DAF+N HMGITAEN+AK+W++SR EQD++A QSQ+K   AQ+ G+FD EI+PV
Sbjct: 143 MLNDGLIDAFNNYHMGITAENVAKQWNLSREEQDQFALQSQLKCEAAQKAGHFDTEILPV 202

Query: 315 VISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKD--GTVTAGNASGINDGAAAVLLMS 372
            + +RKG + V+KDE+P+A +T EA QKLRP F KD  GTVTAGNASGINDGAAAV++M 
Sbjct: 203 NVPSRKGPITVSKDEFPRAGSTAEAFQKLRPAFIKDGSGTVTAGNASGINDGAAAVVMMR 262

Query: 373 YKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYF 425
             TA  R + PL R+V+ +  GV+P +MG GPI A    L KAGWS ++V  F
Sbjct: 263 ASTAAQRGLTPLVRVVSWAHVGVDPAVMGIGPINATKKALEKAGWSVDDVDLF 315

Source: Capitella teleta

Species: Capitella teleta

Genus: Capitella

Family: Capitellidae

Order: Capitellida

Class: Polychaeta

Phylum: Annelida

Superkingdom: Eukaryota

>gi|306841486|ref|ZP_07474186.1| acetyl-CoA acetyltransferase [Brucella sp. BO2] gi|306288450|gb|EFM59806.1| acetyl-CoA acetyltransferase [Brucella sp. BO2]

 Score =  268 bits (686), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 134/224 (59%), Positives = 162/224 (72%), Gaps = 5/224 (2%)

Query: 195 LLMSYKRAQARNIQPLARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDS 254
           L  S  RA A  +Q      I SGDA  IVAGGQE MS APH   +R+G+K+ D +M D+
Sbjct: 90  LCGSGLRAVALGMQQ-----IISGDAKIIVAGGQESMSMAPHCAYLRSGVKMGDFKMIDT 144

Query: 255 MVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPV 314
           M+ DGLTDAFH  HMGITAENIA++W +SR EQDE+A  SQ K   AQ+ G FDEEIVP 
Sbjct: 145 MLKDGLTDAFHGYHMGITAENIARQWQLSRSEQDEFALASQYKAEAAQKAGRFDEEIVPF 204

Query: 315 VISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYK 374
            +  RKGDVVV+ DEY +  TT+E L KL+P F K+GTVTAGNASGINDGAAAV+LM   
Sbjct: 205 TVKARKGDVVVSADEYIRPGTTMEVLAKLKPAFDKEGTVTAGNASGINDGAAAVVLMDAG 264

Query: 375 TAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWS 418
            A  R ++PLARIV+ ++AGV+P++MGTGPIPA    L KAGWS
Sbjct: 265 EAARRGVKPLARIVSWATAGVDPSIMGTGPIPATRKALEKAGWS 308

Source: Brucella sp. BO2

Species: Brucella sp. BO2

Genus: Brucella

Family: Brucellaceae

Order: Rhizobiales

Class: Alphaproteobacteria

Phylum: Proteobacteria

Superkingdom: Bacteria

>gi|265984783|ref|ZP_06097518.1| acetyl-CoA acetyltransferase [Brucella sp. 83/13] gi|306839459|ref|ZP_07472267.1| acetyl-CoA acetyltransferase [Brucella sp. NF 2653] gi|264663375|gb|EEZ33636.1| acetyl-CoA acetyltransferase [Brucella sp. 83/13] gi|306405404|gb|EFM61675.1| acetyl-CoA acetyltransferase [Brucella sp. NF 2653]

 Score =  268 bits (685), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 134/224 (59%), Positives = 162/224 (72%), Gaps = 5/224 (2%)

Query: 195 LLMSYKRAQARNIQPLARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDS 254
           L  S  RA A  +Q      I SGDA  IVAGGQE MS APH   +R+G+K+ D +M D+
Sbjct: 90  LCGSGLRAVALGMQQ-----IVSGDAKIIVAGGQESMSMAPHCAYLRSGVKMGDFKMIDT 144

Query: 255 MVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPV 314
           M+ DGLTDAFH  HMGITAENIA++W +SR EQDE+A  SQ K   AQ+ G FDEEIVP 
Sbjct: 145 MLKDGLTDAFHGYHMGITAENIARQWQLSRSEQDEFALASQHKAEAAQKAGRFDEEIVPF 204

Query: 315 VISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYK 374
            +  RKGDVVV+ DEY +  TT+E L KL+P F K+GTVTAGNASGINDGAAAV+LM   
Sbjct: 205 TVKARKGDVVVSADEYIRPGTTMEVLAKLKPAFDKEGTVTAGNASGINDGAAAVVLMDAG 264

Query: 375 TAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWS 418
            A  R ++PLARIV+ ++AGV+P++MGTGPIPA    L KAGWS
Sbjct: 265 EAARRGVKPLARIVSWATAGVDPSIMGTGPIPATRKALEKAGWS 308

Source: Brucella sp. 83/13

Species: Brucella sp. 83/13

Genus: Brucella

Family: Brucellaceae

Order: Rhizobiales

Class: Alphaproteobacteria

Phylum: Proteobacteria

Superkingdom: Bacteria

>gi|23502628|ref|NP_698755.1| acetyl-CoA acetyltransferase [Brucella suis 1330] gi|163845349|ref|YP_001623004.1| acetyl-CoA acetyltransferase [Brucella suis ATCC 23445] gi|256370178|ref|YP_003107689.1| acetyl-CoA acetyltransferase [Brucella microti CCM 4915] gi|261219353|ref|ZP_05933634.1| acetyl-CoA acetyltransferase [Brucella ceti M13/05/1] gi|261222890|ref|ZP_05937171.1| acetyl-CoA acetyltransferase [Brucella ceti B1/94] gi|261316270|ref|ZP_05955467.1| acetyl-CoA acetyltransferase [Brucella pinnipedialis B2/94] gi|261322415|ref|ZP_05961612.1| acetyl-CoA acetyltransferase [Brucella ceti M644/93/1] gi|261750922|ref|ZP_05994631.1| acetyl-CoA acetyltransferase [Brucella suis bv. 5 str. 513] gi|265987336|ref|ZP_06099893.1| acetyl-CoA acetyltransferase [Brucella pinnipedialis M292/94/1] gi|265998849|ref|ZP_06111406.1| acetyl-CoA acetyltransferase [Brucella ceti M490/95/1] gi|340791368|ref|YP_004756833.1| acetyl-CoA acetyltransferase [Brucella pinnipedialis B2/94] gi|376281423|ref|YP_005155429.1| acetyl-CoA acetyltransferase [Brucella suis VBI22] gi|384225415|ref|YP_005616579.1| acetyl-CoA acetyltransferase [Brucella suis 1330] gi|23348634|gb|AAN30670.1| acetyl-CoA acetyltransferase [Brucella suis 1330] gi|163676072|gb|ABY40182.1| acetyl-CoA acetyltransferase [Brucella suis ATCC 23445] gi|256000341|gb|ACU48740.1| acetyl-CoA acetyltransferase [Brucella microti CCM 4915] gi|260921474|gb|EEX88127.1| acetyl-CoA acetyltransferase [Brucella ceti B1/94] gi|260924442|gb|EEX91010.1| acetyl-CoA acetyltransferase [Brucella ceti M13/05/1] gi|261295105|gb|EEX98601.1| acetyl-CoA acetyltransferase [Brucella ceti M644/93/1] gi|261295493|gb|EEX98989.1| acetyl-CoA acetyltransferase [Brucella pinnipedialis B2/94] gi|261740675|gb|EEY28601.1| acetyl-CoA acetyltransferase [Brucella suis bv. 5 str. 513] gi|262553538|gb|EEZ09307.1| acetyl-CoA acetyltransferase [Brucella ceti M490/95/1] gi|264659533|gb|EEZ29794.1| acetyl-CoA acetyltransferase [Brucella pinnipedialis M292/94/1] gi|340559827|gb|AEK55065.1| acetyl-CoA acetyltransferase [Brucella pinnipedialis B2/94] gi|343383595|gb|AEM19087.1| acetyl-CoA acetyltransferase [Brucella suis 1330] gi|358259022|gb|AEU06757.1| acetyl-CoA acetyltransferase [Brucella suis VBI22]

 Score =  268 bits (685), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 134/224 (59%), Positives = 162/224 (72%), Gaps = 5/224 (2%)

Query: 195 LLMSYKRAQARNIQPLARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDS 254
           L  S  RA A  +Q      I SGDA  IVAGGQE MS APH   +R+G+K+ D +M D+
Sbjct: 90  LCGSGLRAVALGMQQ-----IVSGDAKIIVAGGQESMSMAPHCAYLRSGVKMGDFKMIDT 144

Query: 255 MVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPV 314
           M+ DGLTDAFH  HMGITAENIA++W +SR EQDE+A  SQ K   AQ+ G FDEEIVP 
Sbjct: 145 MLKDGLTDAFHGYHMGITAENIARQWQLSRSEQDEFALASQHKAEAAQKAGRFDEEIVPF 204

Query: 315 VISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYK 374
            +  RKGDVVV+ DEY +  TT+E L KL+P F K+GTVTAGNASGINDGAAAV+LM   
Sbjct: 205 TVKARKGDVVVSADEYIRPGTTMEVLAKLKPAFDKEGTVTAGNASGINDGAAAVVLMDAG 264

Query: 375 TAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWS 418
            A  R ++PLARIV+ ++AGV+P++MGTGPIPA    L KAGWS
Sbjct: 265 EAARRGVKPLARIVSWATAGVDPSIMGTGPIPATRKALEKAGWS 308

Source: Brucella suis 1330

Species: Brucella suis

Genus: Brucella

Family: Brucellaceae

Order: Rhizobiales

Class: Alphaproteobacteria

Phylum: Proteobacteria

Superkingdom: Bacteria

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	441
UNIPROTKB|F1LS48	653	Acat3 "Protein Acat3" [Rattus	0.489	0.330	0.545	9.9e-64
UNIPROTKB|F1SB62	406	ACAT2 "Uncharacterized protein	0.489	0.532	0.577	1.6e-63
UNIPROTKB|F1Q466	406	ACAT2 "Uncharacterized protein	0.489	0.532	0.559	6.2e-62
UNIPROTKB|B7Z233	426	ACAT2 "cDNA FLJ53975, highly s	0.489	0.507	0.555	3.4e-61
UNIPROTKB|Q9BWD1	397	ACAT2 "Acetyl-CoA acetyltransf	0.489	0.544	0.555	3.4e-61
FB|FBgn0035203	392	CG9149 [Drosophila melanogaste	0.480	0.540	0.570	3.4e-61
MGI|MGI:87871	397	Acat2 "acetyl-Coenzyme A acety	0.489	0.544	0.550	1.9e-60
UNIPROTKB|Q17QI3	397	ACAT2 "Uncharacterized protein	0.489	0.544	0.541	2.4e-60
RGD|1359366	397	Acat2 "acetyl-CoA acetyltransf	0.489	0.544	0.545	2.4e-60
RGD|1562948	397	RGD1562948 "similar to Ab2-076	0.489	0.544	0.536	1.7e-59

UNIPROTKB|F1LS48 Acat3 "Protein Acat3" [Rattus norvegicus (taxid:10116)]

 Score = 618 (222.6 bits), Expect = 9.9e-64, Sum P(2) = 9.9e-64
 Identities = 119/218 (54%), Positives = 162/218 (74%)

Query:   210 LARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHM 269
             LA  +I  GD+T +VAGG E MS+APH+ ++R+G+K+ +  + DS++ DGLTDAFHN HM
Sbjct:   101 LAAQSIAMGDSTIVVAGGMENMSKAPHLAHLRSGVKMGEVPLADSILCDGLTDAFHNYHM 160

Query:   270 GITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDE 329
             GITAEN+AKKW +SR  QD+ A  SQ +   AQ+ G+FD+EIVPV +S+RKG   V  DE
Sbjct:   161 GITAENVAKKWQVSREAQDKVAVVSQNRAEHAQKAGHFDKEIVPVHVSSRKGLTEVKIDE 220

Query:   330 YPKANTTVEALQKLRPVFQKDGT--VTAGNASGINDGAAAVLLMSYKTAQARNIQPLARI 387
             +P+  + +EA+ KL+P F  DGT  VT  NASG+NDGAAAV+LM    A++R ++PLA++
Sbjct:   221 FPRHGSNLEAMSKLKPYFLTDGTGTVTPANASGMNDGAAAVVLMKKTEAESRMLKPLAQV 280

Query:   388 VAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYF 425
             V+ S AGVEP++MG GPIPA+   +AKAGWS E+V  F
Sbjct:   281 VSWSQAGVEPSVMGVGPIPAIKQAVAKAGWSLEDVDVF 318

GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA

UNIPROTKB|F1SB62 ACAT2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 648 (233.2 bits), Expect = 1.6e-63, P = 1.6e-63
 Identities = 126/218 (57%), Positives = 162/218 (74%)

Query:   210 LARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHM 269
             LA  AI  GD+  +VAGG E MS+APH++ +R G++L +A + DS++ DGLTDAFHN HM
Sbjct:   110 LAAQAIGVGDSRIVVAGGMENMSKAPHLVRLRTGVRLGEAALTDSILCDGLTDAFHNYHM 169

Query:   270 GITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDE 329
             GITAEN+AKKW +SR +QD  A  SQ +T KAQ+ G+FD+EIVPV +S+RKG   V  DE
Sbjct:   170 GITAENVAKKWQVSREDQDRLAALSQDRTEKAQKAGHFDKEIVPVFVSSRKGVTEVKTDE 229

Query:   330 YPKANTTVEALQKLRPVFQKDGT--VTAGNASGINDGAAAVLLMSYKTAQARNIQPLARI 387
             +P+  +T+EA+ KL+P F  DGT  VT  NASGINDGAAAV+LM    A+ R + PLA I
Sbjct:   230 FPRPGSTLEAMSKLKPYFLTDGTGTVTPANASGINDGAAAVVLMKKSEAENRGLTPLAHI 289

Query:   388 VAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYF 425
             V+ S AGVEP++MGTGPIPA+   +AKAGWS E+V  F
Sbjct:   290 VSWSQAGVEPSIMGTGPIPAIKQAVAKAGWSLEDVDIF 327

GO:0005739 "mitochondrion" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

GO:0003985 "acetyl-CoA C-acetyltransferase activity" evidence=IEA

UNIPROTKB|F1Q466 ACAT2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 633 (227.9 bits), Expect = 6.2e-62, P = 6.2e-62
 Identities = 122/218 (55%), Positives = 161/218 (73%)

Query:   210 LARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHM 269
             LA  +I  GD++ +VAGG E MS+APH++++R G+K+ +  + DS++ DGLTDAFHN HM
Sbjct:   110 LAAQSIGIGDSSIVVAGGMESMSKAPHLVHLRAGVKIGEMPLADSILCDGLTDAFHNYHM 169

Query:   270 GITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDE 329
             GITAEN+AKKW +SR +QD+ A  SQ +T  AQ+ GYFD+EIVPV +S+RKG   V  DE
Sbjct:   170 GITAENVAKKWQVSREDQDKCAVLSQNRTESAQKAGYFDKEIVPVFVSSRKGLTEVKTDE 229

Query:   330 YPKANTTVEALQKLRPVFQKDGT--VTAGNASGINDGAAAVLLMSYKTAQARNIQPLARI 387
             +P+  + +EA+ KL+P F  DGT  VT  NASGINDGAAAV+LM    A  R + PLA+I
Sbjct:   230 FPRHGSNIEAVSKLKPYFLTDGTGTVTPANASGINDGAAAVVLMKKSEAANRGLTPLAQI 289

Query:   388 VAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYF 425
             V+ S  GVEP++MGTGPIPA+   +AKAGWS E+V  F
Sbjct:   290 VSWSQVGVEPSIMGTGPIPAIKQAVAKAGWSLEDVDIF 327

GO:0005739 "mitochondrion" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

GO:0003985 "acetyl-CoA C-acetyltransferase activity" evidence=IEA

UNIPROTKB|B7Z233 ACAT2 "cDNA FLJ53975, highly similar to Acetyl-CoA acetyltransferase, cytosolic (EC 2.3.1.9)" [Homo sapiens (taxid:9606)]

 Score = 626 (225.4 bits), Expect = 3.4e-61, P = 3.4e-61
 Identities = 121/218 (55%), Positives = 159/218 (72%)

Query:   210 LARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHM 269
             LA  +I  GD++ +VAGG E MS+APH+  +R G+K+ +  + DS++ DGLTDAFHN HM
Sbjct:   130 LAVQSIGIGDSSIVVAGGMENMSKAPHLAYLRTGVKIGEMPLTDSILCDGLTDAFHNCHM 189

Query:   270 GITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDE 329
             GITAEN+AKKW +SR +QD+ A  SQ +T  AQ+ G+FD+EIVPV++STRKG + V  DE
Sbjct:   190 GITAENVAKKWQVSREDQDKVAVLSQNRTENAQKAGHFDKEIVPVLVSTRKGLIEVKTDE 249

Query:   330 YPKANTTVEALQKLRPVFQKDGT--VTAGNASGINDGAAAVLLMSYKTAQARNIQPLARI 387
             +P+  + +EA+ KL+P F  DGT  VT  NASGINDGAAAV+LM    A  R + PLARI
Sbjct:   250 FPRHGSNIEAMSKLKPYFLTDGTGTVTPANASGINDGAAAVVLMKKSEADKRGLTPLARI 309

Query:   388 VAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYF 425
             V+ S  GVEP++MG GPIPA+   + KAGWS E+V  F
Sbjct:   310 VSWSQVGVEPSIMGIGPIPAIKQAVTKAGWSLEDVDIF 347

GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005739 "mitochondrion" evidence=IDA

UNIPROTKB|Q9BWD1 ACAT2 "Acetyl-CoA acetyltransferase, cytosolic" [Homo sapiens (taxid:9606)]

 Score = 626 (225.4 bits), Expect = 3.4e-61, P = 3.4e-61
 Identities = 121/218 (55%), Positives = 159/218 (72%)

Query:   210 LARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHM 269
             LA  +I  GD++ +VAGG E MS+APH+  +R G+K+ +  + DS++ DGLTDAFHN HM
Sbjct:   101 LAVQSIGIGDSSIVVAGGMENMSKAPHLAYLRTGVKIGEMPLTDSILCDGLTDAFHNCHM 160

Query:   270 GITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDE 329
             GITAEN+AKKW +SR +QD+ A  SQ +T  AQ+ G+FD+EIVPV++STRKG + V  DE
Sbjct:   161 GITAENVAKKWQVSREDQDKVAVLSQNRTENAQKAGHFDKEIVPVLVSTRKGLIEVKTDE 220

Query:   330 YPKANTTVEALQKLRPVFQKDGT--VTAGNASGINDGAAAVLLMSYKTAQARNIQPLARI 387
             +P+  + +EA+ KL+P F  DGT  VT  NASGINDGAAAV+LM    A  R + PLARI
Sbjct:   221 FPRHGSNIEAMSKLKPYFLTDGTGTVTPANASGINDGAAAVVLMKKSEADKRGLTPLARI 280

Query:   388 VAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYF 425
             V+ S  GVEP++MG GPIPA+   + KAGWS E+V  F
Sbjct:   281 VSWSQVGVEPSIMGIGPIPAIKQAVTKAGWSLEDVDIF 318

GO:0005737 "cytoplasm" evidence=IDA

GO:0003985 "acetyl-CoA C-acetyltransferase activity" evidence=IDA

GO:0006629 "lipid metabolic process" evidence=IC

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

GO:0005739 "mitochondrion" evidence=IDA

FB|FBgn0035203 CG9149 [Drosophila melanogaster (taxid:7227)]

 Score = 626 (225.4 bits), Expect = 3.4e-61, P = 3.4e-61
 Identities = 121/212 (57%), Positives = 156/212 (73%)

Query:   214 AIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITA 273
             AI+SGDA  +VAGGQE MS APHV+++R G+K+    M DSM+ DGLTDA  NIHMGITA
Sbjct:   101 AIRSGDAQIVVAGGQESMSLAPHVMHLRQGVKMGPGTMVDSMIHDGLTDAMENIHMGITA 160

Query:   274 ENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKA 333
             EN+A K++ISR  QD YA  SQ +  +AQ+ GYFD+EIVPV I  RKG    +KDEY KA
Sbjct:   161 ENLADKYNISREAQDAYAVLSQNRAEEAQKKGYFDKEIVPVEIKDRKGTTTFSKDEYIKA 220

Query:   334 NTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSA 393
              +TVE +QKLR  F++ G++TAGNASG+ND AAAVLLMS +    + ++PLARIV  + +
Sbjct:   221 GSTVEGIQKLRAAFKEGGSITAGNASGVNDSAAAVLLMSGEEVARKGLKPLARIVGWTQS 280

Query:   394 GVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYF 425
             G+EP +MG GP+ AV A+L K  W +EEV  +
Sbjct:   281 GIEPKVMGLGPVTAVEALLQKINWKREEVDLY 312

GO:0005829 "cytosol" evidence=ISS

GO:0003985 "acetyl-CoA C-acetyltransferase activity" evidence=ISS

GO:0008152 "metabolic process" evidence=IEA

MGI|MGI:87871 Acat2 "acetyl-Coenzyme A acetyltransferase 2" [Mus musculus (taxid:10090)]

 Score = 619 (223.0 bits), Expect = 1.9e-60, P = 1.9e-60
 Identities = 120/218 (55%), Positives = 161/218 (73%)

Query:   210 LARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHM 269
             LA  +I  GD+T +VAGG E MS+APH+ ++R G+++ +  + DS++ DGLTDAFHN HM
Sbjct:   101 LAAQSIAMGDSTIVVAGGMENMSKAPHLTHLRTGVRMGEVPLADSILCDGLTDAFHNYHM 160

Query:   270 GITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDE 329
             GITAEN+AKKW +SR  QD+ A  SQ +   AQ+ G+FD+EIVPV++S+RKG   V  DE
Sbjct:   161 GITAENVAKKWQVSREAQDKVAVLSQNRAEHAQKAGHFDKEIVPVLVSSRKGLTEVKIDE 220

Query:   330 YPKANTTVEALQKLRPVFQKDGT--VTAGNASGINDGAAAVLLMSYKTAQARNIQPLARI 387
             +P+  + +EA+ KL+P F  DGT  VT  NASG+NDGAAAV+LM    A+ R ++PLARI
Sbjct:   221 FPRHGSNLEAMGKLKPYFLTDGTGTVTPANASGMNDGAAAVVLMKKTEAERRMLKPLARI 280

Query:   388 VAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYF 425
             V+ S AGVEP++MG GPIPA+   +AKAGWS E+V  F
Sbjct:   281 VSWSQAGVEPSVMGVGPIPAIKQAVAKAGWSLEDVDLF 318

GO:0003824 "catalytic activity" evidence=IEA

GO:0003985 "acetyl-CoA C-acetyltransferase activity" evidence=ISO

GO:0005737 "cytoplasm" evidence=ISO

GO:0005739 "mitochondrion" evidence=IDA

GO:0008152 "metabolic process" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016746 "transferase activity, transferring acyl groups" evidence=IEA

GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA

UNIPROTKB|Q17QI3 ACAT2 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 618 (222.6 bits), Expect = 2.4e-60, P = 2.4e-60
 Identities = 118/218 (54%), Positives = 162/218 (74%)

Query:   210 LARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHM 269
             LA  +I+ GD++ +VAGG E MS+APH++++R G+K+ +  + DS++ DGLTDAFHN HM
Sbjct:   101 LAAQSIRIGDSSIVVAGGMENMSKAPHLVHLRTGVKIGETPLADSILCDGLTDAFHNYHM 160

Query:   270 GITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDE 329
             GITAEN+AK+W +SR +QD+ A  SQ +T  AQ+ G+FD+EIVPV +S++KG   V  DE
Sbjct:   161 GITAENVAKQWQVSREDQDKVAVLSQNRTEHAQKAGHFDKEIVPVFVSSKKGLTEVKTDE 220

Query:   330 YPKANTTVEALQKLRPVFQKDGT--VTAGNASGINDGAAAVLLMSYKTAQARNIQPLARI 387
             +P+  + +EA+ KL+P F  DGT  VT  NASGINDGAAAV+LM    A  R + PLA+I
Sbjct:   221 FPRHGSNMEAVSKLKPCFLMDGTGTVTPANASGINDGAAAVVLMKKSEAGNRGLTPLAQI 280

Query:   388 VAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYF 425
             V+ + AGVEP++MG GPIPA+   +AKAGWS E+V  F
Sbjct:   281 VSWAQAGVEPSIMGIGPIPAIKQAVAKAGWSLEDVDVF 318

GO:0005739 "mitochondrion" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

GO:0003985 "acetyl-CoA C-acetyltransferase activity" evidence=IEA

RGD|1359366 Acat2 "acetyl-CoA acetyltransferase 2" [Rattus norvegicus (taxid:10116)]

 Score = 618 (222.6 bits), Expect = 2.4e-60, P = 2.4e-60
 Identities = 119/218 (54%), Positives = 162/218 (74%)

Query:   210 LARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHM 269
             LA  +I  GD+T +VAGG E MS+APH+ ++R+G+K+ +  + DS++ DGLTDAFHN HM
Sbjct:   101 LAAQSIAMGDSTIVVAGGMENMSKAPHLAHLRSGVKMGEVPLADSILCDGLTDAFHNYHM 160

Query:   270 GITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDE 329
             GITAEN+AKKW +SR  QD+ A  SQ +   AQ+ G+FD+EIVPV +S+RKG   V  DE
Sbjct:   161 GITAENVAKKWQVSREAQDKVAVVSQNRAEHAQKAGHFDKEIVPVHVSSRKGLTEVKIDE 220

Query:   330 YPKANTTVEALQKLRPVFQKDGT--VTAGNASGINDGAAAVLLMSYKTAQARNIQPLARI 387
             +P+  + +EA+ KL+P F  DGT  VT  NASG+NDGAAAV+LM    A++R ++PLA++
Sbjct:   221 FPRHGSNLEAMSKLKPYFLTDGTGTVTPANASGMNDGAAAVVLMKKTEAESRMLKPLAQV 280

Query:   388 VAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYF 425
             V+ S AGVEP++MG GPIPA+   +AKAGWS E+V  F
Sbjct:   281 VSWSQAGVEPSVMGVGPIPAIKQAVAKAGWSLEDVDVF 318

GO:0001889 "liver development" evidence=IEP

GO:0003985 "acetyl-CoA C-acetyltransferase activity" evidence=ISO;IDA

GO:0005634 "nucleus" evidence=ISO

GO:0005730 "nucleolus" evidence=ISO

GO:0005737 "cytoplasm" evidence=ISO

GO:0005739 "mitochondrion" evidence=ISO

GO:0005829 "cytosol" evidence=IDA

GO:0007420 "brain development" evidence=IEP

GO:0031670 "cellular response to nutrient" evidence=IEP

GO:0046952 "ketone body catabolic process" evidence=IEP

GO:0071398 "cellular response to fatty acid" evidence=IEP

RGD|1562948 RGD1562948 "similar to Ab2-076" [Rattus norvegicus (taxid:10116)]

 Score = 610 (219.8 bits), Expect = 1.7e-59, P = 1.7e-59
 Identities = 117/218 (53%), Positives = 161/218 (73%)

Query:   210 LARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHM 269
             LA  +I  GD+T +VAGG E MS+APH+ ++R+G+K+ +  + DS++ DGLTDAFHN HM
Sbjct:   101 LAAQSIAMGDSTIVVAGGMENMSKAPHLAHLRSGVKMGEVPLADSILCDGLTDAFHNYHM 160

Query:   270 GITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDE 329
             GITAEN+AKKW +SR  QD  A  SQ +   AQ+ G+FD+EIVPV +S+RKG   V  DE
Sbjct:   161 GITAENVAKKWQVSREAQDRVAVVSQNRAEHAQKAGHFDKEIVPVHVSSRKGLAEVKIDE 220

Query:   330 YPKANTTVEALQKLRPVFQKDGT--VTAGNASGINDGAAAVLLMSYKTAQARNIQPLARI 387
             +P+  + +EA+ KL+P F  DGT  VT+ NA+G+NDGAAAV+LM    A++R ++PLA++
Sbjct:   221 FPRHGSNLEAMSKLKPYFLTDGTGTVTSANATGMNDGAAAVVLMKKTEAESRMLKPLAQV 280

Query:   388 VAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYF 425
             V+ S AGVEP++MG GPIPA+   +AKAGWS  +V  F
Sbjct:   281 VSWSQAGVEPSVMGVGPIPAIKQAVAKAGWSLPDVDVF 318

GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P45359	THLA_CLOAB	2, ., 3, ., 1, ., 9	0.5296	0.4920	0.5535	yes	N/A
P50174	THIL_RHIME	2, ., 3, ., 1, ., 9	0.5614	0.5056	0.5674	yes	N/A
Q9BWD1	THIC_HUMAN	2, ., 3, ., 1, ., 9	0.5550	0.4897	0.5440	yes	N/A
Q6GJW4	THLA_STAAR	2, ., 3, ., 1, ., 9	0.5022	0.4988	0.5597	yes	N/A
Q9I2A8	ATOB_PSEAE	2, ., 3, ., 1, ., 9	0.5497	0.4739	0.5318	yes	N/A
Q2YVF5	THLA_STAAB	2, ., 3, ., 1, ., 9	0.5067	0.4988	0.5597	yes	N/A
P44873	ATOB_HAEIN	2, ., 3, ., 1, ., 9	0.5213	0.4739	0.5318	yes	N/A
P14611	THIL_CUPNH	2, ., 3, ., 1, ., 9	0.5069	0.4829	0.5419	yes	N/A
Q9ZHI1	THIL_CHRVO	2, ., 3, ., 1, ., 9	0.5209	0.4829	0.5433	yes	N/A
Q2G124	THLA_STAA8	2, ., 3, ., 1, ., 9	0.5022	0.4988	0.5597	yes	N/A
P45369	THIL_ALLVD	2, ., 3, ., 1, ., 9	0.5395	0.4829	0.5406	yes	N/A
Q5XI22	THIC_RAT	2, ., 3, ., 1, ., 9	0.5458	0.4897	0.5440	yes	N/A
Q18AR0	THLA_CLOD6	2, ., 3, ., 1, ., 9	0.5598	0.4716	0.5319	yes	N/A
Q8CAY6	THIC_MOUSE	2, ., 3, ., 1, ., 9	0.5504	0.4897	0.5440	yes	N/A
Q5HIU0	THLA_STAAC	2, ., 3, ., 1, ., 9	0.5067	0.4988	0.5597	yes	N/A

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.3.1	0.766

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	441
PRK05790	393	PRK05790, PRK05790, putative acyltransferase; Prov	1e-111
cd00751	386	cd00751, thiolase, Thiolase are ubiquitous enzymes	1e-101
TIGR01930	386	TIGR01930, AcCoA-C-Actrans, acetyl-CoA acetyltrans	7e-88
PRK09051	394	PRK09051, PRK09051, beta-ketothiolase; Provisional	7e-86
PRK05656	393	PRK05656, PRK05656, acetyl-CoA acetyltransferase;	3e-75
pfam00108	262	pfam00108, Thiolase_N, Thiolase, N-terminal domain	1e-71
PRK05790	393	PRK05790, PRK05790, putative acyltransferase; Prov	3e-71
PRK08235	393	PRK08235, PRK08235, acetyl-CoA acetyltransferase;	5e-71
PRK09050	401	PRK09050, PRK09050, beta-ketoadipyl CoA thiolase;	5e-68
PRK06633	392	PRK06633, PRK06633, acetyl-CoA acetyltransferase;	1e-65
TIGR02430	400	TIGR02430, pcaF, 3-oxoadipyl-CoA thiolase	6e-64
cd00751	386	cd00751, thiolase, Thiolase are ubiquitous enzymes	1e-61
PRK06205	404	PRK06205, PRK06205, acetyl-CoA acetyltransferase;	3e-61
PRK13359	400	PRK13359, PRK13359, beta-ketoadipyl CoA thiolase;	1e-59
pfam00108	262	pfam00108, Thiolase_N, Thiolase, N-terminal domain	2e-58
PLN02644	394	PLN02644, PLN02644, acetyl-CoA C-acetyltransferase	3e-57
PRK09051	394	PRK09051, PRK09051, beta-ketothiolase; Provisional	1e-55
COG0183	392	COG0183, PaaJ, Acetyl-CoA acetyltransferase [Lipid	1e-55
TIGR01930	386	TIGR01930, AcCoA-C-Actrans, acetyl-CoA acetyltrans	3e-54
PRK08131	401	PRK08131, PRK08131, acetyl-CoA acetyltransferase;	5e-51
PRK09052	399	PRK09052, PRK09052, acetyl-CoA acetyltransferase;	1e-50
PRK08235	393	PRK08235, PRK08235, acetyl-CoA acetyltransferase;	7e-49
PRK07851	406	PRK07851, PRK07851, acetyl-CoA acetyltransferase;	3e-48
PRK06445	394	PRK06445, PRK06445, acetyl-CoA acetyltransferase;	1e-47
PRK07661	391	PRK07661, PRK07661, acetyl-CoA acetyltransferase;	1e-47
PRK08947	387	PRK08947, fadA, 3-ketoacyl-CoA thiolase; Reviewed	8e-47
PRK05656	393	PRK05656, PRK05656, acetyl-CoA acetyltransferase;	2e-45
PRK06954	397	PRK06954, PRK06954, acetyl-CoA acetyltransferase;	6e-45
PLN02287	452	PLN02287, PLN02287, 3-ketoacyl-CoA thiolase	1e-43
PRK08242	402	PRK08242, PRK08242, acetyl-CoA acetyltransferase;	1e-41
PRK07108	392	PRK07108, PRK07108, acetyl-CoA acetyltransferase;	4e-41
PRK09050	401	PRK09050, PRK09050, beta-ketoadipyl CoA thiolase;	1e-39
PLN02644	394	PLN02644, PLN02644, acetyl-CoA C-acetyltransferase	1e-37
PRK06633	392	PRK06633, PRK06633, acetyl-CoA acetyltransferase;	2e-37
PRK08170	426	PRK08170, PRK08170, acetyl-CoA acetyltransferase;	3e-37
PRK06205	404	PRK06205, PRK06205, acetyl-CoA acetyltransferase;	1e-36
TIGR02445	385	TIGR02445, fadA, fatty oxidation complex, beta sub	2e-36
PRK06366	388	PRK06366, PRK06366, acetyl-CoA acetyltransferase;	1e-35
TIGR02430	400	TIGR02430, pcaF, 3-oxoadipyl-CoA thiolase	2e-35
PRK06690	361	PRK06690, PRK06690, acetyl-CoA acetyltransferase;	2e-34
PRK07801	382	PRK07801, PRK07801, acetyl-CoA acetyltransferase;	1e-33
PRK06025	417	PRK06025, PRK06025, acetyl-CoA acetyltransferase;	3e-33
PRK13359	400	PRK13359, PRK13359, beta-ketoadipyl CoA thiolase;	1e-32
PRK05790	393	PRK05790, PRK05790, putative acyltransferase; Prov	4e-32
COG0183	392	COG0183, PaaJ, Acetyl-CoA acetyltransferase [Lipid	2e-30
PRK09052	399	PRK09052, PRK09052, acetyl-CoA acetyltransferase;	3e-30
PRK07850	387	PRK07850, PRK07850, acetyl-CoA acetyltransferase;	3e-30
cd00751	386	cd00751, thiolase, Thiolase are ubiquitous enzymes	6e-30
cd00826	393	cd00826, nondecarbox_cond_enzymes, nondecarboxylat	1e-29
PRK07851	406	PRK07851, PRK07851, acetyl-CoA acetyltransferase;	3e-29
PRK06504	390	PRK06504, PRK06504, acetyl-CoA acetyltransferase;	3e-28
PRK09268	427	PRK09268, PRK09268, acetyl-CoA acetyltransferase;	6e-28
PRK08963	428	PRK08963, fadI, 3-ketoacyl-CoA thiolase; Reviewed	6e-28
PRK06954	397	PRK06954, PRK06954, acetyl-CoA acetyltransferase;	1e-27
PRK08131	401	PRK08131, PRK08131, acetyl-CoA acetyltransferase;	3e-27
PRK09051	394	PRK09051, PRK09051, beta-ketothiolase; Provisional	4e-27
PRK07661	391	PRK07661, PRK07661, acetyl-CoA acetyltransferase;	5e-27
PRK07108	392	PRK07108, PRK07108, acetyl-CoA acetyltransferase;	1e-26
PLN02287	452	PLN02287, PLN02287, 3-ketoacyl-CoA thiolase	1e-25
PRK08947	387	PRK08947, fadA, 3-ketoacyl-CoA thiolase; Reviewed	2e-25
PRK06445	394	PRK06445, PRK06445, acetyl-CoA acetyltransferase;	2e-24
TIGR01930	386	TIGR01930, AcCoA-C-Actrans, acetyl-CoA acetyltrans	4e-24
PRK09050	401	PRK09050, PRK09050, beta-ketoadipyl CoA thiolase;	2e-23
PRK08242	402	PRK08242, PRK08242, acetyl-CoA acetyltransferase;	2e-22
PRK08235	393	PRK08235, PRK08235, acetyl-CoA acetyltransferase;	1e-21
PRK08170	426	PRK08170, PRK08170, acetyl-CoA acetyltransferase;	3e-21
PRK05656	393	PRK05656, PRK05656, acetyl-CoA acetyltransferase;	1e-20
pfam00108	262	pfam00108, Thiolase_N, Thiolase, N-terminal domain	1e-20
PRK06366	388	PRK06366, PRK06366, acetyl-CoA acetyltransferase;	2e-20
PRK06690	361	PRK06690, PRK06690, acetyl-CoA acetyltransferase;	2e-19
TIGR02430	400	TIGR02430, pcaF, 3-oxoadipyl-CoA thiolase	8e-19
PRK08963	428	PRK08963, fadI, 3-ketoacyl-CoA thiolase; Reviewed	8e-19
TIGR02446	430	TIGR02446, FadI, fatty oxidation complex, beta sub	1e-18
PRK07850	387	PRK07850, PRK07850, acetyl-CoA acetyltransferase;	2e-18
PRK06205	404	PRK06205, PRK06205, acetyl-CoA acetyltransferase;	3e-18
PRK09268	427	PRK09268, PRK09268, acetyl-CoA acetyltransferase;	3e-17
PRK13359	400	PRK13359, PRK13359, beta-ketoadipyl CoA thiolase;	4e-17
cd00826	393	cd00826, nondecarbox_cond_enzymes, nondecarboxylat	4e-17
PRK06025	417	PRK06025, PRK06025, acetyl-CoA acetyltransferase;	2e-16
TIGR02445	385	TIGR02445, fadA, fatty oxidation complex, beta sub	3e-16
PLN02644	394	PLN02644, PLN02644, acetyl-CoA C-acetyltransferase	5e-15
PRK07801	382	PRK07801, PRK07801, acetyl-CoA acetyltransferase;	5e-15
PRK06504	390	PRK06504, PRK06504, acetyl-CoA acetyltransferase;	1e-13
COG0183	392	COG0183, PaaJ, Acetyl-CoA acetyltransferase [Lipid	3e-13
PRK08963	428	PRK08963, fadI, 3-ketoacyl-CoA thiolase; Reviewed	5e-13
PRK09268	427	PRK09268, PRK09268, acetyl-CoA acetyltransferase;	2e-12
TIGR02446	430	TIGR02446, FadI, fatty oxidation complex, beta sub	2e-11
PRK08170	426	PRK08170, PRK08170, acetyl-CoA acetyltransferase;	3e-11
pfam02803	123	pfam02803, Thiolase_C, Thiolase, C-terminal domain	3e-11
PRK06690	361	PRK06690, PRK06690, acetyl-CoA acetyltransferase;	5e-11
TIGR02446	430	TIGR02446, FadI, fatty oxidation complex, beta sub	1e-08
cd00327	254	cd00327, cond_enzymes, Condensing enzymes; Family	2e-08
PRK06366	388	PRK06366, PRK06366, acetyl-CoA acetyltransferase;	9e-08
COG0304	412	COG0304, FabB, 3-oxoacyl-(acyl-carrier-protein) sy	4e-07
cd00834	406	cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier prot	1e-06
PRK07801	382	PRK07801, PRK07801, acetyl-CoA acetyltransferase;	2e-06
PRK06504	390	PRK06504, PRK06504, acetyl-CoA acetyltransferase;	1e-05
TIGR03150	407	TIGR03150, fabF, beta-ketoacyl-acyl-carrier-protei	8e-04
PRK07314	411	PRK07314, PRK07314, 3-oxoacyl-(acyl carrier protei	0.002
PRK07103	410	PRK07103, PRK07103, polyketide beta-ketoacyl:acyl	0.003

>gnl|CDD|180261 PRK05790, PRK05790, putative acyltransferase; Provisional

 Score =  331 bits (851), Expect = e-111
 Identities = 126/215 (58%), Positives = 159/215 (73%), Gaps = 2/215 (0%)

Query: 210 LARIAIKSGDATAIVAGGQECMSQAPHVI-NIRNGIKLNDAEMKDSMVFDGLTDAFHNIH 268
           LA  AI++GDA  +VAGGQE MSQAPHV+   R G K+ D E+ D+M+ DGLTDAF+  H
Sbjct: 97  LAAQAIRAGDADIVVAGGQESMSQAPHVLPGSRWGQKMGDVELVDTMIHDGLTDAFNGYH 156

Query: 269 MGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGD-VVVAK 327
           MGITAEN+A+++ I+R EQDE+A  SQ K   A + G F +EIVPV I  RKGD VVV  
Sbjct: 157 MGITAENLAEQYGITREEQDEFALASQQKAEAAIKAGRFKDEIVPVTIKQRKGDPVVVDT 216

Query: 328 DEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARI 387
           DE+P+ +TT E+L KLRP F KDGTVTAGNASGINDGAAAV++MS   A+   + PLARI
Sbjct: 217 DEHPRPDTTAESLAKLRPAFDKDGTVTAGNASGINDGAAAVVVMSEAKAKELGLTPLARI 276

Query: 388 VAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEV 422
           V+ + AGV+P +MG GP+PA+   L KAGWS  ++
Sbjct: 277 VSYAVAGVDPAIMGIGPVPAIRKALEKAGWSLADL 311

Length = 393

>gnl|CDD|238383 cd00751, thiolase, Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine

 Score =  306 bits (787), Expect = e-101
 Identities = 110/212 (51%), Positives = 148/212 (69%)

Query: 214 AIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITA 273
           +I +G+A  +VAGG E MS+AP+++              D M+ DGLTD F  + MGITA
Sbjct: 97  SIAAGEADVVVAGGVESMSRAPYLLPKARRGGRLGLNTLDGMLDDGLTDPFTGLSMGITA 156

Query: 274 ENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKA 333
           EN+A+K+ ISR EQDE+A +S  + A AQE G F +EIVPV +  RKG VVV +DE P+ 
Sbjct: 157 ENVAEKYGISREEQDEFALRSHQRAAAAQEAGRFKDEIVPVEVPGRKGPVVVDRDEGPRP 216

Query: 334 NTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSA 393
           +TT+E L KL+P F+KDGTVTAGNASGINDGAAAVLLMS + A+   ++PLARIV  + A
Sbjct: 217 DTTLEKLAKLKPAFKKDGTVTAGNASGINDGAAAVLLMSEEKAKELGLKPLARIVGYAVA 276

Query: 394 GVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYF 425
           GV+P +MG GP+PA+   L +AG + +++   
Sbjct: 277 GVDPAIMGIGPVPAIPKALKRAGLTLDDIDLI 308

They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. Length = 386

>gnl|CDD|233642 TIGR01930, AcCoA-C-Actrans, acetyl-CoA acetyltransferases

 Score =  272 bits (698), Expect = 7e-88
 Identities = 109/214 (50%), Positives = 150/214 (70%), Gaps = 2/214 (0%)

Query: 214 AIKSGDATAIVAGGQECMSQAPHVIN--IRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGI 271
            I++G+A  +VAGG E MS+ P+ +    R G+K  +AE++D ++ DGL D  + + MG+
Sbjct: 96  LIRAGEADVVVAGGVESMSRVPYSVPRSRRWGVKPGNAELEDQILKDGLDDPLNGLSMGL 155

Query: 272 TAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYP 331
           TAEN+AKK+ ISR EQDEYA +S  + AKA E G F +EIVPV +  RKG VVV+ DE  
Sbjct: 156 TAENLAKKYGISREEQDEYALRSHQRAAKAWEEGLFKDEIVPVSVKGRKGPVVVSSDEGI 215

Query: 332 KANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMS 391
           + NTT+E L KL+P F  +GTVTAGN+S +NDGAAA+LLMS + A+   + PLARIV+ +
Sbjct: 216 RPNTTLEKLAKLKPAFDPNGTVTAGNSSPLNDGAAALLLMSEEKAKELGLTPLARIVSYA 275

Query: 392 SAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYF 425
            AGV+P +MG GP+PA+   L KAG S  ++  F
Sbjct: 276 VAGVDPEIMGLGPVPAIPKALKKAGLSISDIDLF 309

This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatty acid oxidation [Fatty acid and phospholipid metabolism, Other]. Length = 386

>gnl|CDD|181625 PRK09051, PRK09051, beta-ketothiolase; Provisional

 Score =  267 bits (685), Expect = 7e-86
 Identities = 108/205 (52%), Positives = 141/205 (68%), Gaps = 3/205 (1%)

Query: 214 AIKSGDATAIVAGGQECMSQAPHVI-NIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGIT 272
           AI  GDA   + GG E MS+AP+++   R G ++ DA++ D MV   L D F  IHMG+T
Sbjct: 103 AILLGDADVAIGGGAESMSRAPYLLPAARWGARMGDAKLVDMMV-GALHDPFGTIHMGVT 161

Query: 273 AENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPK 332
           AEN+A K+ ISR  QD  A +S  + A A   GYF ++IVPV I TRKG+VV   DE+ +
Sbjct: 162 AENVAAKYGISREAQDALALESHRRAAAAIAAGYFKDQIVPVEIKTRKGEVVFDTDEHVR 221

Query: 333 ANTTVEALQKLRPVFQKD-GTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMS 391
           A+TT+E L KL+PVF+K+ GTVTAGNASGINDGAAAV+L     A+AR ++PLAR+V  +
Sbjct: 222 ADTTLEDLAKLKPVFKKENGTVTAGNASGINDGAAAVVLAEADAAEARGLKPLARLVGYA 281

Query: 392 SAGVEPTLMGTGPIPAVNAVLAKAG 416
            AGV+P  MG GP+PA    L +AG
Sbjct: 282 HAGVDPEYMGIGPVPATQKALERAG 306

Length = 394

>gnl|CDD|168156 PRK05656, PRK05656, acetyl-CoA acetyltransferase; Provisional

 Score =  240 bits (613), Expect = 3e-75
 Identities = 116/215 (53%), Positives = 152/215 (70%), Gaps = 2/215 (0%)

Query: 210 LARIAIKSGDATAIVAGGQECMSQAPHVI-NIRNGIKLNDAEMKDSMVFDGLTDAFHNIH 268
           LA  AI+ GDA  I+AGGQE MS AP+V+   R G+++  A++ DSM+ DGL DAF++ H
Sbjct: 97  LAAQAIRCGDAEVIIAGGQENMSLAPYVLPGARTGLRMGHAQLVDSMITDGLWDAFNDYH 156

Query: 269 MGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGD-VVVAK 327
           MGITAEN+ +K+ ISR  QD +A  SQ K   A E G FD+EI P++I  RKG+ +  A 
Sbjct: 157 MGITAENLVEKYGISREAQDAFAAASQQKAVAAIEAGRFDDEITPILIPQRKGEPLAFAT 216

Query: 328 DEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARI 387
           DE P+A TT E+L KL+P F+KDG+VTAGNAS +NDGAAAVLLMS   A+A  +  LA+I
Sbjct: 217 DEQPRAGTTAESLAKLKPAFKKDGSVTAGNASSLNDGAAAVLLMSAAKAKALGLPVLAKI 276

Query: 388 VAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEV 422
            A ++AGV+P +MG GP+ A    L KAGWS  E+
Sbjct: 277 AAYANAGVDPAIMGIGPVSATRRCLDKAGWSLAEL 311

Length = 393

>gnl|CDD|215722 pfam00108, Thiolase_N, Thiolase, N-terminal domain

 Score =  226 bits (578), Expect = 1e-71
 Identities = 100/162 (61%), Positives = 125/162 (77%), Gaps = 3/162 (1%)

Query: 214 AIKSGDATAIVAGGQECMSQAPHVINI-RNGIKLNDAEMKDSMVFDGLTDAFHNIHMGIT 272
           AI++GDA  +VAGG E MS AP+V+   R G ++ DA++ D+M+ DGLTDAF+ IHMGIT
Sbjct: 99  AIRAGDADIVVAGGVESMSNAPYVLPASRVGARMGDAKLVDTMLKDGLTDAFNLIHMGIT 158

Query: 273 AENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGD-VVVAKDEYP 331
           AEN+AKK+ ISR EQDE+A +SQ K A AQ+ G F +EIVPV I  RKG  +VV KDE  
Sbjct: 159 AENVAKKYGISREEQDEFALRSQQKAAAAQKAGKFKDEIVPVTIKGRKGKPLVVDKDEGI 218

Query: 332 KANTTVEALQKLRPVFQKD-GTVTAGNASGINDGAAAVLLMS 372
           +  TT+E+L KL+P F K+ GTVTAGNASG+NDGAAAVLLMS
Sbjct: 219 RPGTTLESLAKLKPAFDKENGTVTAGNASGLNDGAAAVLLMS 260

Thiolase is reported to be structurally related to beta-ketoacyl synthase (pfam00109), and also chalcone synthase. Length = 262

>gnl|CDD|180261 PRK05790, PRK05790, putative acyltransferase; Provisional

 Score =  229 bits (587), Expect = 3e-71
 Identities = 85/139 (61%), Positives = 105/139 (75%), Gaps = 2/139 (1%)

Query: 1   MSQAPHVI-NIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDE 59
           MSQAPHV+   R G K+ D E+ D+M+ DGLTDAF+  HMGITAEN+A+++ I+R EQDE
Sbjct: 118 MSQAPHVLPGSRWGQKMGDVELVDTMIHDGLTDAFNGYHMGITAENLAEQYGITREEQDE 177

Query: 60  YAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGD-VVVAKDEYPKANTSVDALQKLRPVFQ 118
           +A  SQ K   A + G F +EIVPV I  RKGD VVV  DE+P+ +T+ ++L KLRP F 
Sbjct: 178 FALASQQKAEAAIKAGRFKDEIVPVTIKQRKGDPVVVDTDEHPRPDTTAESLAKLRPAFD 237

Query: 119 KDGTVTAGNASGINDGAAA 137
           KDGTVTAGNASGINDGAAA
Sbjct: 238 KDGTVTAGNASGINDGAAA 256

Length = 393

>gnl|CDD|181311 PRK08235, PRK08235, acetyl-CoA acetyltransferase; Provisional

 Score =  229 bits (585), Expect = 5e-71
 Identities = 109/218 (50%), Positives = 145/218 (66%), Gaps = 2/218 (0%)

Query: 210 LARIAIKSGDATAIVAGGQECMSQAPHVI-NIRNGIKLNDAEMKDSMVFDGLTDAFHNIH 268
           LA   I++GDA+ IVAGG E MS AP+++   R G ++ D E+ D MV DGLT AF  +H
Sbjct: 97  LADQIIRAGDASVIVAGGMESMSNAPYILPGARWGYRMGDNEVIDLMVADGLTCAFSGVH 156

Query: 269 MGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGD-VVVAK 327
           MG+    +AK+  ISR  QDE+AY+S  +   A E G F+EEIVPV I  RKGD +VVAK
Sbjct: 157 MGVYGGEVAKELGISREAQDEWAYRSHQRAVSAHEEGRFEEEIVPVTIPQRKGDPIVVAK 216

Query: 328 DEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARI 387
           DE P+ +TT+E L KL+PVF K GT+TAGNA G+NDGAAA++LMS   A+    +PLA I
Sbjct: 217 DEAPRKDTTIEKLAKLKPVFDKTGTITAGNAPGVNDGAAALVLMSEDRAKQEGRKPLATI 276

Query: 388 VAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYF 425
           +A ++  VE       P  A+NA+L K G + E++  F
Sbjct: 277 LAHTAIAVEAKDFPRTPGYAINALLEKTGKTVEDIDLF 314

Length = 393

>gnl|CDD|181624 PRK09050, PRK09050, beta-ketoadipyl CoA thiolase; Validated

 Score =  221 bits (565), Expect = 5e-68
 Identities = 111/237 (46%), Positives = 155/237 (65%), Gaps = 9/237 (3%)

Query: 211 ARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMV----FDGLTDAFHN 266
           AR AIK+G+A  ++AGG E MS+AP V+   +      AE+ D+ +     + L  A + 
Sbjct: 101 AR-AIKAGEAELMIAGGVESMSRAPFVMGKADSAFSRQAEIFDTTIGWRFVNPLMKAQYG 159

Query: 267 IH-MGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGD-VV 324
           +  M  TAEN+A+ ++ISR +QD +A +SQ + A AQ  G+  EEIVPV I  +KGD VV
Sbjct: 160 VDSMPETAENVAEDYNISRADQDAFALRSQQRAAAAQAAGFLAEEIVPVTIPQKKGDPVV 219

Query: 325 VAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPL 384
           V +DE+P+  TT+EAL KL+PVF+ DGTVTAGNASG+NDGAAA+LL S   A+   + P 
Sbjct: 220 VDRDEHPRPETTLEALAKLKPVFRPDGTVTAGNASGVNDGAAALLLASEAAAKKHGLTPR 279

Query: 385 ARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEE--VGYFNRVATSGGIANRRQ 439
           ARI+ M++AGVEP +MG GP PA   +LA+ G + ++  V   N    + G+A  RQ
Sbjct: 280 ARILGMATAGVEPRIMGIGPAPATRKLLARLGLTIDQFDVIELNEAFAAQGLAVLRQ 336

Length = 401

>gnl|CDD|168632 PRK06633, PRK06633, acetyl-CoA acetyltransferase; Provisional

 Score =  214 bits (547), Expect = 1e-65
 Identities = 106/209 (50%), Positives = 144/209 (68%)

Query: 210 LARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHM 269
           LA  +I +GD   ++AGGQE MS   H   IR G K  D +M D M +DGLTD F  + M
Sbjct: 98  LAANSIMTGDNEIVIAGGQENMSLGMHGSYIRAGAKFGDIKMVDLMQYDGLTDVFSGVFM 157

Query: 270 GITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDE 329
           GITAENI+K+++ISR EQDE+A  S  K AKAQ  G F +EI+P+ ++ +K   +   DE
Sbjct: 158 GITAENISKQFNISRQEQDEFALSSHKKAAKAQLAGIFKDEILPIEVTIKKTTSLFDHDE 217

Query: 330 YPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARIVA 389
             + +T++E L KLRP F K+G VTAGNAS INDGAA ++++S +  +  N+ PLARIV+
Sbjct: 218 TVRPDTSLEILSKLRPAFDKNGVVTAGNASSINDGAACLMVVSEEALKKHNLTPLARIVS 277

Query: 390 MSSAGVEPTLMGTGPIPAVNAVLAKAGWS 418
            +SAGV+P++MGT P+PA    L+KAGWS
Sbjct: 278 YASAGVDPSIMGTAPVPASQKALSKAGWS 306

Length = 392

>gnl|CDD|131483 TIGR02430, pcaF, 3-oxoadipyl-CoA thiolase

 Score =  210 bits (537), Expect = 6e-64
 Identities = 103/215 (47%), Positives = 148/215 (68%), Gaps = 6/215 (2%)

Query: 214 AIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMV----FDGLTDAFHNIH- 268
           AIK+G+A  ++AGG E MS+AP V+   +      A+++D+ +     + L  A + +  
Sbjct: 102 AIKAGEADLLIAGGVESMSRAPFVMGKADSAFSRSAKIEDTTIGWRFINPLMKALYGVDS 161

Query: 269 MGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGD-VVVAK 327
           M  TAEN+A+++ ISR +QD +A +SQ +TA AQ  G+F EEIVPVVI  +KG+  VV +
Sbjct: 162 MPETAENVAEEFGISREDQDAFALRSQQRTAAAQASGFFAEEIVPVVIPQKKGEPTVVDQ 221

Query: 328 DEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARI 387
           DE+P+  TT+E L KL+PV + DGTVTAGNASG+NDGAAA+LL S +  Q   + P ARI
Sbjct: 222 DEHPRPETTLEGLAKLKPVVRPDGTVTAGNASGVNDGAAALLLASEEAVQRHGLTPRARI 281

Query: 388 VAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEV 422
           +A ++AGVEP +MG GP+PA   +LA+AG S ++ 
Sbjct: 282 LAAATAGVEPRIMGIGPVPATQKLLARAGLSIDQF 316

Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid. Length = 400

>gnl|CDD|238383 cd00751, thiolase, Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine

 Score =  204 bits (522), Expect = 1e-61
 Identities = 78/159 (49%), Positives = 103/159 (64%), Gaps = 11/159 (6%)

Query: 1   MSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEY 60
           MS+AP+++              D M+ DGLTD F  + MGITAEN+A+K+ ISR EQDE+
Sbjct: 114 MSRAPYLLPKARRGGRLGLNTLDGMLDDGLTDPFTGLSMGITAENVAEKYGISREEQDEF 173

Query: 61  AYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTSVDALQKLRPVFQKD 120
           A +S  + A AQE G F +EIVPV +  RKG VVV +DE P+ +T+++ L KL+P F+KD
Sbjct: 174 ALRSHQRAAAAQEAGRFKDEIVPVEVPGRKGPVVVDRDEGPRPDTTLEKLAKLKPAFKKD 233

Query: 121 GTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEYPKA 159
           GTVTAGNASGINDGAAA           V++  +E  K 
Sbjct: 234 GTVTAGNASGINDGAAA-----------VLLMSEEKAKE 261

They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. Length = 386

>gnl|CDD|235741 PRK06205, PRK06205, acetyl-CoA acetyltransferase; Provisional

 Score =  204 bits (520), Expect = 3e-61
 Identities = 92/215 (42%), Positives = 134/215 (62%), Gaps = 9/215 (4%)

Query: 211 ARIAIKSGDATAIVAGGQECMSQAPH-VINIRNGIKLNDAEMKDSMVFDGLTD--AFHNI 267
           A + +++G A  ++AGG E MS       ++R G++    ++ D +     T       +
Sbjct: 98  AAMQVQTGAADVVIAGGAESMSNVEFYTTDMRWGVRGGGVQLHDRLARGRETAGGRRFPV 157

Query: 268 HMGI--TAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGD-VV 324
             G+  TAEN+ +++ ISR EQD  A +S  +   AQE G FD+EIVPV +  RKGD  V
Sbjct: 158 PGGMIETAENLRREYGISREEQDALAVRSHQRAVAAQEAGRFDDEIVPVTVPQRKGDPTV 217

Query: 325 VAKDEYPKANTTVEALQKLRPVFQK---DGTVTAGNASGINDGAAAVLLMSYKTAQARNI 381
           V +DE+P+A+TT+E+L KLRP+  K   + TVTAGNASG ND AAA L+ +   A+   +
Sbjct: 218 VDRDEHPRADTTLESLAKLRPIMGKQDPEATVTAGNASGQNDAAAACLVTTEDKAEELGL 277

Query: 382 QPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAG 416
           +PLAR+V+ + AGVEP+ MG GP+PA    LA+AG
Sbjct: 278 RPLARLVSWAVAGVEPSRMGIGPVPATEKALARAG 312

Length = 404

>gnl|CDD|183998 PRK13359, PRK13359, beta-ketoadipyl CoA thiolase; Provisional

 Score =  200 bits (509), Expect = 1e-59
 Identities = 103/238 (43%), Positives = 151/238 (63%), Gaps = 9/238 (3%)

Query: 210 LARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMV----FDGLTDAFH 265
           +A  AIKSG+A  ++AGG E MS+AP V+          AE+ D+ +     + L    +
Sbjct: 99  VAARAIKSGEAALMIAGGVESMSRAPFVMGKAESAFSRQAEIFDTTIGWRFVNPLMKQLY 158

Query: 266 NIH-MGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGD-V 323
            +  M  TAEN+A  +++SR +QD +A +SQ K A+AQ  G   +EIVPV I  +KGD +
Sbjct: 159 GVDSMPETAENVATDYNVSRADQDAFALRSQQKAARAQADGTLAQEIVPVTIPQKKGDPL 218

Query: 324 VVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKTAQARNIQP 383
           VV++DE+P+  TT+EAL KL+ V + DGTVTAGNASG+NDGA A+LL S   A+   ++P
Sbjct: 219 VVSRDEHPRE-TTLEALAKLKGVVRPDGTVTAGNASGVNDGACALLLASEAAARRHGLKP 277

Query: 384 LARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEE--VGYFNRVATSGGIANRRQ 439
            AR++ +++AGVEP +MG GP PA   +LA+ G + ++  V   N    S G+A  R+
Sbjct: 278 RARVLGIATAGVEPRVMGIGPAPATQKLLARLGMTLDQFDVIELNEAFASQGLAVLRE 335

Length = 400

>gnl|CDD|215722 pfam00108, Thiolase_N, Thiolase, N-terminal domain

 Score =  192 bits (490), Expect = 2e-58
 Identities = 83/140 (59%), Positives = 107/140 (76%), Gaps = 3/140 (2%)

Query: 1   MSQAPHVINI-RNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDE 59
           MS AP+V+   R G ++ DA++ D+M+ DGLTDAF+ IHMGITAEN+AKK+ ISR EQDE
Sbjct: 116 MSNAPYVLPASRVGARMGDAKLVDTMLKDGLTDAFNLIHMGITAENVAKKYGISREEQDE 175

Query: 60  YAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGD-VVVAKDEYPKANTSVDALQKLRPVFQ 118
           +A +SQ K A AQ+ G F +EIVPV I  RKG  +VV KDE  +  T++++L KL+P F 
Sbjct: 176 FALRSQQKAAAAQKAGKFKDEIVPVTIKGRKGKPLVVDKDEGIRPGTTLESLAKLKPAFD 235

Query: 119 KD-GTVTAGNASGINDGAAA 137
           K+ GTVTAGNASG+NDGAAA
Sbjct: 236 KENGTVTAGNASGLNDGAAA 255

Thiolase is reported to be structurally related to beta-ketoacyl synthase (pfam00109), and also chalcone synthase. Length = 262

>gnl|CDD|215347 PLN02644, PLN02644, acetyl-CoA C-acetyltransferase

 Score =  193 bits (492), Expect = 3e-57
 Identities = 92/220 (41%), Positives = 125/220 (56%), Gaps = 5/220 (2%)

Query: 210 LARIAIKSGDATAIVAGGQECMSQAPHVI-NIRNGIKLNDAEMKDSMVFDGLTDAFHNIH 268
           LA  +I+ G    +VAGG E MS AP  +   R G +L    + D M+ DGL D +++  
Sbjct: 96  LAAQSIQLGINDVVVAGGMESMSNAPKYLPEARKGSRLGHDTVVDGMLKDGLWDVYNDFG 155

Query: 269 MGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGD--VVVA 326
           MG+ AE  A ++SISR EQD YA QS  +   AQE G F  EIVPV +   +G   V+V 
Sbjct: 156 MGVCAELCADQYSISREEQDAYAIQSYERAIAAQEAGAFAWEIVPVEVPGGRGRPSVIVD 215

Query: 327 KDEYPKANTTVEALQKLRPVFQKD-GTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLA 385
           KDE          L+KLRP F++D G+VTAGNAS I+DGAAA++L+S + A    +Q +A
Sbjct: 216 KDEGL-GKFDPAKLRKLRPSFKEDGGSVTAGNASSISDGAAALVLVSGEKALELGLQVIA 274

Query: 386 RIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYF 425
           +I   + A   P L  T P  A+   L  AG    +V Y+
Sbjct: 275 KIRGYADAAQAPELFTTAPALAIPKALKHAGLEASQVDYY 314

Length = 394

>gnl|CDD|181625 PRK09051, PRK09051, beta-ketothiolase; Provisional

 Score =  189 bits (481), Expect = 1e-55
 Identities = 75/139 (53%), Positives = 100/139 (71%), Gaps = 3/139 (2%)

Query: 1   MSQAPHVI-NIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDE 59
           MS+AP+++   R G ++ DA++ D MV   L D F  IHMG+TAEN+A K+ ISR  QD 
Sbjct: 120 MSRAPYLLPAARWGARMGDAKLVDMMV-GALHDPFGTIHMGVTAENVAAKYGISREAQDA 178

Query: 60  YAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTSVDALQKLRPVFQK 119
            A +S  + A A   GYF ++IVPV I TRKG+VV   DE+ +A+T+++ L KL+PVF+K
Sbjct: 179 LALESHRRAAAAIAAGYFKDQIVPVEIKTRKGEVVFDTDEHVRADTTLEDLAKLKPVFKK 238

Query: 120 D-GTVTAGNASGINDGAAA 137
           + GTVTAGNASGINDGAAA
Sbjct: 239 ENGTVTAGNASGINDGAAA 257

Length = 394

>gnl|CDD|223261 COG0183, PaaJ, Acetyl-CoA acetyltransferase [Lipid metabolism]

 Score =  189 bits (481), Expect = 1e-55
 Identities = 93/220 (42%), Positives = 124/220 (56%), Gaps = 14/220 (6%)

Query: 210 LARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHM 269
           LA  AI SG+A  ++AGG E MS AP     R G+++ D+   D M  D L DA     M
Sbjct: 101 LAAQAIASGEADVVLAGGVEKMSDAPMG---REGVRVLDS-AVDPMFEDPLGDATPGYLM 156

Query: 270 GITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDE 329
           G+TAE  AK++ ISR +QDE A +S    A   + G+FD EI P  +        V  D 
Sbjct: 157 GLTAERYAKRYGISREDQDEVAVKSHKNAAANPKAGFFD-EITPEDVLNS----PVVADP 211

Query: 330 YPKAN--TTVEALQKLRPVFQK-DGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLAR 386
             + +   T +    L P F++  GTVTAGNASGINDGAAA+LLMS   A+   + PLA 
Sbjct: 212 LRRLDCSPTSDGAAALVPAFEEVGGTVTAGNASGINDGAAALLLMSESKAKELGLAPLAA 271

Query: 387 IVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSK-EEVGYF 425
           I A + AGV+P++M  GP+ AV+  L  AG    E++G  
Sbjct: 272 IRAYAMAGVDPSIM-DGPVAAVHDALTIAGLLALEDLGLA 310

Length = 392

>gnl|CDD|233642 TIGR01930, AcCoA-C-Actrans, acetyl-CoA acetyltransferases

 Score =  184 bits (470), Expect = 3e-54
 Identities = 72/139 (51%), Positives = 99/139 (71%), Gaps = 2/139 (1%)

Query: 1   MSQAPHVIN--IRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQD 58
           MS+ P+ +    R G+K  +AE++D ++ DGL D  + + MG+TAEN+AKK+ ISR EQD
Sbjct: 113 MSRVPYSVPRSRRWGVKPGNAELEDQILKDGLDDPLNGLSMGLTAENLAKKYGISREEQD 172

Query: 59  EYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTSVDALQKLRPVFQ 118
           EYA +S  + AKA E G F +EIVPV +  RKG VVV+ DE  + NT+++ L KL+P F 
Sbjct: 173 EYALRSHQRAAKAWEEGLFKDEIVPVSVKGRKGPVVVSSDEGIRPNTTLEKLAKLKPAFD 232

Query: 119 KDGTVTAGNASGINDGAAA 137
            +GTVTAGN+S +NDGAAA
Sbjct: 233 PNGTVTAGNSSPLNDGAAA 251

This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatty acid oxidation [Fatty acid and phospholipid metabolism, Other]. Length = 386

>gnl|CDD|181242 PRK08131, PRK08131, acetyl-CoA acetyltransferase; Provisional

 Score =  176 bits (449), Expect = 5e-51
 Identities = 89/222 (40%), Positives = 136/222 (61%), Gaps = 18/222 (8%)

Query: 214 AIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDG----------LTDA 263
           AI  G+    +AGG E MS+AP V+      K   A  +D+ VFD           +   
Sbjct: 102 AITCGEGDLYLAGGVESMSRAPFVMG-----KAESAFSRDAKVFDTTIGARFPNPKIVAQ 156

Query: 264 FHNIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVIST--RKG 321
           + N  M  T +N+A ++ ISR + D +A QSQ K   A+E G+F +EI P+ +    +  
Sbjct: 157 YGNDSMPETGDNVAAEFGISREDADRFAAQSQAKYQAAKEEGFFADEITPIEVPQGRKLP 216

Query: 322 DVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKTAQARNI 381
             +VA+DE+P+ ++TVEAL KL+P+F+  G VTAGNASGINDGAAA+L+ S    +   +
Sbjct: 217 PKLVAEDEHPRPSSTVEALTKLKPLFE-GGVVTAGNASGINDGAAALLIGSRAAGEKYGL 275

Query: 382 QPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVG 423
           +P+ARI++ ++AGVEP +MG GP+ A+   LA+AG + +++ 
Sbjct: 276 KPMARILSSAAAGVEPRIMGIGPVEAIKKALARAGLTLDDMD 317

Length = 401

>gnl|CDD|181626 PRK09052, PRK09052, acetyl-CoA acetyltransferase; Provisional

 Score =  175 bits (447), Expect = 1e-50
 Identities = 88/234 (37%), Positives = 133/234 (56%), Gaps = 21/234 (8%)

Query: 204 ARNIQPLARIA--IKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLT 261
           A  +Q +A  A  I+ G+A  ++A G E MS  P    + N   ++ A      +F    
Sbjct: 96  ASGLQAVAMAADRIRVGEADVMIAAGVESMSMVPM---MGNKPSMSPA------IFARDE 146

Query: 262 DAFHNIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKG 321
           +      MG+TAE +A++W +SR +QD +A +S  K   AQ+ G F +EI P  I+ R  
Sbjct: 147 NVGIAYGMGLTAEKVAEQWKVSREDQDAFALESHQKAIAAQQAGEFKDEITPYEITERFP 206

Query: 322 DV----------VVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLM 371
           D+           V  DE P+A+T++E L KL+PVF   G+VTAGN+S  +DGA AV+L+
Sbjct: 207 DLATGEVDVKTRTVDLDEGPRADTSLEGLAKLKPVFANKGSVTAGNSSQTSDGAGAVILV 266

Query: 372 SYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYF 425
           S K  +  N+ PLAR V+ + AGV P +MG GPI A+ A L +AG  ++++ + 
Sbjct: 267 SEKALKQFNLTPLARFVSFAVAGVPPEIMGIGPIEAIPAALKQAGLKQDDLDWI 320

Length = 399

>gnl|CDD|181311 PRK08235, PRK08235, acetyl-CoA acetyltransferase; Provisional

 Score =  171 bits (434), Expect = 7e-49
 Identities = 94/217 (43%), Positives = 125/217 (57%), Gaps = 18/217 (8%)

Query: 1   MSQAPHVI-NIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDE 59
           MS AP+++   R G ++ D E+ D MV DGLT AF  +HMG+    +AK+  ISR  QDE
Sbjct: 118 MSNAPYILPGARWGYRMGDNEVIDLMVADGLTCAFSGVHMGVYGGEVAKELGISREAQDE 177

Query: 60  YAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGD-VVVAKDEYPKANTSVDALQKLRPVFQ 118
           +AY+S  +   A E G F+EEIVPV I  RKGD +VVAKDE P+ +T+++ L KL+PVF 
Sbjct: 178 WAYRSHQRAVSAHEEGRFEEEIVPVTIPQRKGDPIVVAKDEAPRKDTTIEKLAKLKPVFD 237

Query: 119 KDGTVTAGNASGINDGAAA------------GKLYLFTRKGDVVVAKDEYPKANTTVEAL 166
           K GT+TAGNA G+NDGAAA            G+  L T      +A +      T   A+
Sbjct: 238 KTGTITAGNAPGVNDGAAALVLMSEDRAKQEGRKPLATILAHTAIAVEAKDFPRTPGYAI 297

Query: 167 QKLRPVFQKDG-TVTAGNASGINDGAAAVLLMSYKRA 202
             L    +K G TV   +   IN+  AAV L S + A
Sbjct: 298 NAL---LEKTGKTVEDIDLFEINEAFAAVALASTEIA 331

Length = 393

>gnl|CDD|181146 PRK07851, PRK07851, acetyl-CoA acetyltransferase; Provisional

 Score =  169 bits (431), Expect = 3e-48
 Identities = 86/225 (38%), Positives = 134/225 (59%), Gaps = 20/225 (8%)

Query: 214 AIKSGDATAIVAGGQECMSQ-----APHVINIRNGIKLNDAEMKDSMVFDGLTDAFHN-- 266
           AIK+G+    ++ G E +S+     +  + + +N +   +A+ + +   +G  +A+H+  
Sbjct: 103 AIKAGEGDVFISAGVETVSRFAKGNSDSLPDTKNPL-FAEAQARTAARAEGGAEAWHDPR 161

Query: 267 ---------IHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVIS 317
                    I MG TAEN+A+   ISR EQDE+  +SQ +  +A   G+F+ EI PV   
Sbjct: 162 EDGLLPDVYIAMGQTAENVAQLTGISREEQDEWGVRSQNRAEEAIANGFFEREITPV--- 218

Query: 318 TRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKTAQ 377
           T     VV+ D+ P+A TT E + +L+PVF+ DGTVTAGNA  +NDGAAAV++MS   A+
Sbjct: 219 TLPDGTVVSTDDGPRAGTTYEKVSQLKPVFRPDGTVTAGNACPLNDGAAAVVIMSDTKAR 278

Query: 378 ARNIQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEV 422
              + PLARIV+   +G+ P +MG GP+ A    LA+AG S +++
Sbjct: 279 ELGLTPLARIVSTGVSGLSPEIMGLGPVEASKQALARAGMSIDDI 323

Length = 406

>gnl|CDD|180563 PRK06445, PRK06445, acetyl-CoA acetyltransferase; Provisional

 Score =  167 bits (425), Expect = 1e-47
 Identities = 80/213 (37%), Positives = 124/213 (58%), Gaps = 8/213 (3%)

Query: 215 IKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDS--MVFDGLTDAFHNIHMGIT 272
           I +G A  ++AGG E M++ P   N    I+ N   + D   + +D LT  +    MG+T
Sbjct: 109 IATGMADIVIAGGVEHMTRTPMGDNPH--IEPNPKLLTDPKYIEYD-LTTGYV---MGLT 162

Query: 273 AENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPK 332
           AE +A++  I R E D ++ +S    AKA + GYF +EI+P+ +       VV  D+  +
Sbjct: 163 AEKLAEEAGIKREEMDRWSLRSHQLAAKAIQEGYFKDEILPIEVEVEGKKKVVDVDQSVR 222

Query: 333 ANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSS 392
            +T++E L KL P F+ DG +TAGN+S +N GA+ VLLMS K  +   ++P+A+I +   
Sbjct: 223 PDTSLEKLAKLPPAFKPDGVITAGNSSPLNSGASYVLLMSKKAVKKYGLKPMAKIRSFGF 282

Query: 393 AGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYF 425
           AGV P +MG GP+PA    L KAG S +++  +
Sbjct: 283 AGVPPAIMGKGPVPASKKALEKAGLSVKDIDLW 315

Length = 394

>gnl|CDD|181072 PRK07661, PRK07661, acetyl-CoA acetyltransferase; Provisional

 Score =  167 bits (425), Expect = 1e-47
 Identities = 88/223 (39%), Positives = 126/223 (56%), Gaps = 26/223 (11%)

Query: 215 IKSGDATAIVAGGQECMSQAP---HVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGI 271
           I  G + A++AGG E MS  P   HV+  R   +L +A  +  M             MG 
Sbjct: 104 IMLGHSEAVIAGGAESMSLVPMMGHVV--RPNPRLVEAAPEYYM------------GMGH 149

Query: 272 TAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGD--------- 322
           TAE +A K+ ISR +QD +A +S  + AKA   G F +EIVPV ++ R            
Sbjct: 150 TAEQVAVKYGISREDQDAFAVRSHQRAAKALAEGKFADEIVPVDVTLRTVGENNKLQEET 209

Query: 323 VVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKTAQARNIQ 382
           +  ++DE  +A+TT+E L KLRP F   G+VTAGN+S ++DGAAAVLLM  + A++  ++
Sbjct: 210 ITFSQDEGVRADTTLEILGKLRPAFNVKGSVTAGNSSQMSDGAAAVLLMDREKAESDGLK 269

Query: 383 PLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYF 425
           PLA+  + + AGV P +MG GPI A+   L  AG    ++G F
Sbjct: 270 PLAKFRSFAVAGVPPEVMGIGPIAAIPKALKLAGLELSDIGLF 312

Length = 391

>gnl|CDD|181592 PRK08947, fadA, 3-ketoacyl-CoA thiolase; Reviewed

 Score =  165 bits (420), Expect = 8e-47
 Identities = 80/216 (37%), Positives = 116/216 (53%), Gaps = 18/216 (8%)

Query: 214 AIKSGDATAIVAGGQECMSQAP--HVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGI 271
           AI +GD    + GG E M   P  H ++   G+  N A  K + +            MG+
Sbjct: 104 AIMTGDGDVFLIGGVEHMGHVPMNHGVDFHPGLSKNVA--KAAGM------------MGL 149

Query: 272 TAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGD-VVVAKDEY 330
           TAE + K   ISR +QD +A +S  +   A + G F  EI+P       G   +   DE 
Sbjct: 150 TAEMLGKMHGISREQQDAFAARSHQRAWAATQEGRFKNEIIPTEGHDADGVLKLFDYDEV 209

Query: 331 PKANTTVEALQKLRPVFQ-KDGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARIVA 389
            +  TTVEAL  LRP F   +GTVTAG +S ++DGA+A+L+MS   A+   ++P ARI +
Sbjct: 210 IRPETTVEALAALRPAFDPVNGTVTAGTSSALSDGASAMLVMSESRAKELGLKPRARIRS 269

Query: 390 MSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYF 425
           M+ AG +P++MG GP+PA    L +AG S  ++  F
Sbjct: 270 MAVAGCDPSIMGYGPVPATQKALKRAGLSISDIDVF 305

Length = 387

>gnl|CDD|168156 PRK05656, PRK05656, acetyl-CoA acetyltransferase; Provisional

 Score =  161 bits (410), Expect = 2e-45
 Identities = 74/139 (53%), Positives = 101/139 (72%), Gaps = 2/139 (1%)

Query: 1   MSQAPHVI-NIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDE 59
           MS AP+V+   R G+++  A++ DSM+ DGL DAF++ HMGITAEN+ +K+ ISR  QD 
Sbjct: 118 MSLAPYVLPGARTGLRMGHAQLVDSMITDGLWDAFNDYHMGITAENLVEKYGISREAQDA 177

Query: 60  YAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGD-VVVAKDEYPKANTSVDALQKLRPVFQ 118
           +A  SQ K   A E G FD+EI P++I  RKG+ +  A DE P+A T+ ++L KL+P F+
Sbjct: 178 FAAASQQKAVAAIEAGRFDDEITPILIPQRKGEPLAFATDEQPRAGTTAESLAKLKPAFK 237

Query: 119 KDGTVTAGNASGINDGAAA 137
           KDG+VTAGNAS +NDGAAA
Sbjct: 238 KDGSVTAGNASSLNDGAAA 256

Length = 393

>gnl|CDD|180775 PRK06954, PRK06954, acetyl-CoA acetyltransferase; Provisional

 Score =  160 bits (407), Expect = 6e-45
 Identities = 84/212 (39%), Positives = 122/212 (57%), Gaps = 5/212 (2%)

Query: 217 SGDATAIVAGGQECMSQAPHVI-NIRNGIKLNDAEMKDSMVFDGLTDAFHNIH-MGITAE 274
           +G    IVAGG E M+ AP+++   R G+++   ++ D M  DGL DA+     MG  AE
Sbjct: 109 AGSVDVIVAGGMESMTNAPYLLPKARGGMRMGHGQVLDHMFLDGLEDAYDKGRLMGTFAE 168

Query: 275 NIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYP-KA 333
             A ++  +R  QD +A +S  +  +A E G F  EI PV ++ +KGD V+ +DE P KA
Sbjct: 169 ECAGEYGFTREAQDAFAIESLARAKRANEDGSFAWEIAPVTVAGKKGDTVIDRDEQPFKA 228

Query: 334 NTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSA 393
           N   E +  L+P F K GTVTA N+S I+DGAAA+++M   TA+   + PLAR+V  S+ 
Sbjct: 229 N--PEKIPTLKPAFSKTGTVTAANSSSISDGAAALVMMRASTAKRLGLAPLARVVGHSTF 286

Query: 394 GVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYF 425
              P+   T P+ A+  +  K GW   EV  F
Sbjct: 287 AQAPSKFTTAPVGAIRKLFEKNGWRAAEVDLF 318

Length = 397

>gnl|CDD|215161 PLN02287, PLN02287, 3-ketoacyl-CoA thiolase

 Score =  158 bits (402), Expect = 1e-43
 Identities = 77/218 (35%), Positives = 121/218 (55%), Gaps = 16/218 (7%)

Query: 214 AIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITA 273
           AIK+G     +  G E M+  P    +     +N      S   D L      + MGIT+
Sbjct: 147 AIKAGFYDIGIGAGVESMTTNP----MAWEGGVNPRVESFSQAQDCL------LPMGITS 196

Query: 274 ENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPV---VISTRKGD---VVVAK 327
           EN+A+++ ++R EQD+ A +S  K A A   G F +EIVPV   ++  + G+   +V++ 
Sbjct: 197 ENVAERFGVTREEQDQAAVESHRKAAAATASGKFKDEIVPVHTKIVDPKTGEEKPIVISV 256

Query: 328 DEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARI 387
           D+  + NTT+  L KL+PVF+K+GT TAGN+S ++DGA AVLLM    A  + +  L   
Sbjct: 257 DDGIRPNTTLADLAKLKPVFKKNGTTTAGNSSQVSDGAGAVLLMKRSVAMQKGLPILGVF 316

Query: 388 VAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYF 425
            + ++ GV+P +MG GP  A+ A +  AG   +++  F
Sbjct: 317 RSFAAVGVDPAVMGIGPAVAIPAAVKAAGLELDDIDLF 354

Length = 452

>gnl|CDD|236197 PRK08242, PRK08242, acetyl-CoA acetyltransferase; Validated

 Score =  151 bits (384), Expect = 1e-41
 Identities = 83/239 (34%), Positives = 122/239 (51%), Gaps = 38/239 (15%)

Query: 210 LARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHM 269
           LA   ++SG    ++AGG E MS+ P  +    G    D               F    +
Sbjct: 100 LAAAKVRSGWDDLVIAGGVESMSRVP--MGSDGGAWAMDPST-----------NFPTYFV 146

Query: 270 --GITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAK 327
             GI+A+ IA K+  SR + D YA +SQ + A A   GYF + +VPV    + G  ++  
Sbjct: 147 PQGISADLIATKYGFSREDVDAYAVESQQRAAAAWAEGYFAKSVVPV--KDQNGLTILDH 204

Query: 328 DEYPKANTTVEALQKLRPVFQKDGTV---------------------TAGNASGINDGAA 366
           DE+ +  TT+E+L KL+P F   G +                      AGN+SGI DGAA
Sbjct: 205 DEHMRPGTTMESLAKLKPSFAMMGEMGGFDAVALQKYPEVERINHVHHAGNSSGIVDGAA 264

Query: 367 AVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYF 425
           AVL+ S +  +A  ++P ARIVA ++ G +PT+M TGP+PA    LAKAG + +++  F
Sbjct: 265 AVLIGSEEAGKALGLKPRARIVATATIGSDPTIMLTGPVPATRKALAKAGLTVDDIDLF 323

Length = 402

>gnl|CDD|180843 PRK07108, PRK07108, acetyl-CoA acetyltransferase; Provisional

 Score =  150 bits (380), Expect = 4e-41
 Identities = 80/227 (35%), Positives = 119/227 (52%), Gaps = 27/227 (11%)

Query: 210 LARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDG-LTDAFHNIH 268
           LA   + +G+    VAGG E +S                 EM   M+ +G L +    I+
Sbjct: 99  LAAQRVIAGEGDVFVAGGVESIS-------------CVQNEMNRHMLREGWLVEHKPEIY 145

Query: 269 MGI--TAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGD---- 322
             +  TAEN+AK++ IS+  QDEY  QSQ + A AQ  G FD+EIVP+ ++    D    
Sbjct: 146 WSMLQTAENVAKRYGISKERQDEYGVQSQQRAAAAQAAGRFDDEIVPITVTAGVADKATG 205

Query: 323 ------VVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKTA 376
                 V V+ DE  + +TT+E + K+R      G +TAGNAS  +DGA+A ++M+ K A
Sbjct: 206 RLFTKEVTVSADEGIRPDTTLEGVSKIRSALP-GGVITAGNASQFSDGASACVVMNAKVA 264

Query: 377 QARNIQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVG 423
           +   +QPL      + AG EP  MG GP+ AV  +L +AG   +++ 
Sbjct: 265 EREGLQPLGIFRGFAVAGCEPDEMGIGPVFAVPKLLKQAGLKVDDID 311

Length = 392

>gnl|CDD|181624 PRK09050, PRK09050, beta-ketoadipyl CoA thiolase; Validated

 Score =  146 bits (370), Expect = 1e-39
 Identities = 59/100 (59%), Positives = 78/100 (78%), Gaps = 1/100 (1%)

Query: 39  MGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGD-VVVAK 97
           M  TAEN+A+ ++ISR +QD +A +SQ + A AQ  G+  EEIVPV I  +KGD VVV +
Sbjct: 163 MPETAENVAEDYNISRADQDAFALRSQQRAAAAQAAGFLAEEIVPVTIPQKKGDPVVVDR 222

Query: 98  DEYPKANTSVDALQKLRPVFQKDGTVTAGNASGINDGAAA 137
           DE+P+  T+++AL KL+PVF+ DGTVTAGNASG+NDGAAA
Sbjct: 223 DEHPRPETTLEALAKLKPVFRPDGTVTAGNASGVNDGAAA 262

Length = 401

>gnl|CDD|215347 PLN02644, PLN02644, acetyl-CoA C-acetyltransferase

 Score =  140 bits (355), Expect = 1e-37
 Identities = 66/141 (46%), Positives = 85/141 (60%), Gaps = 5/141 (3%)

Query: 1   MSQAPHVI-NIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDE 59
           MS AP  +   R G +L    + D M+ DGL D +++  MG+ AE  A ++SISR EQD 
Sbjct: 117 MSNAPKYLPEARKGSRLGHDTVVDGMLKDGLWDVYNDFGMGVCAELCADQYSISREEQDA 176

Query: 60  YAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGD--VVVAKDEYPKANTSVDALQKLRPVF 117
           YA QS  +   AQE G F  EIVPV +   +G   V+V KDE          L+KLRP F
Sbjct: 177 YAIQSYERAIAAQEAGAFAWEIVPVEVPGGRGRPSVIVDKDEGL-GKFDPAKLRKLRPSF 235

Query: 118 QKD-GTVTAGNASGINDGAAA 137
           ++D G+VTAGNAS I+DGAAA
Sbjct: 236 KEDGGSVTAGNASSISDGAAA 256

Length = 394

>gnl|CDD|168632 PRK06633, PRK06633, acetyl-CoA acetyltransferase; Provisional

 Score =  140 bits (353), Expect = 2e-37
 Identities = 71/136 (52%), Positives = 91/136 (66%)

Query: 1   MSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEY 60
           MS   H   IR G K  D +M D M +DGLTD F  + MGITAENI+K+++ISR EQDE+
Sbjct: 119 MSLGMHGSYIRAGAKFGDIKMVDLMQYDGLTDVFSGVFMGITAENISKQFNISRQEQDEF 178

Query: 61  AYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTSVDALQKLRPVFQKD 120
           A  S  K AKAQ  G F +EI+P+ ++ +K   +   DE  + +TS++ L KLRP F K+
Sbjct: 179 ALSSHKKAAKAQLAGIFKDEILPIEVTIKKTTSLFDHDETVRPDTSLEILSKLRPAFDKN 238

Query: 121 GTVTAGNASGINDGAA 136
           G VTAGNAS INDGAA
Sbjct: 239 GVVTAGNASSINDGAA 254

Length = 392

>gnl|CDD|181265 PRK08170, PRK08170, acetyl-CoA acetyltransferase; Provisional

 Score =  140 bits (355), Expect = 3e-37
 Identities = 74/231 (32%), Positives = 117/231 (50%), Gaps = 25/231 (10%)

Query: 215 IKSGDATAIVAGGQECMSQAPHVIN-------------------IRNGIKLNDAEMKDSM 255
           I  G A  ++AGG E MS AP + +                   +    KL  + +   +
Sbjct: 103 IALGRADLVLAGGVEAMSHAPLLFSEKMVRWLAGWYAAKSIGQKLAALGKLRPSYLAPVI 162

Query: 256 -VFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPV 314
            +  GLTD    ++MG TAE +A ++ I+R + D YA +S  + A AQ  G   +E+VP+
Sbjct: 163 GLLRGLTDPVVGLNMGQTAEVLAHRFGITREQMDAYAARSHQRLAAAQAEGRL-KEVVPL 221

Query: 315 VISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKD-GTVTAGNASGINDGAAAVLLMSY 373
               R G      D+  + ++++E L KL+P F +  G VTAGN+S I DGA  +LL S 
Sbjct: 222 F--DRDGKFY-DHDDGVRPDSSMEKLAKLKPFFDRPYGRVTAGNSSQITDGACWLLLASE 278

Query: 374 KTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGY 424
           +  +   + PL RIV    A ++P+ MG GP+ A   +L + G + E++  
Sbjct: 279 EAVKKYGLPPLGRIVDSQWAALDPSQMGLGPVHAATPLLQRHGLTLEDLDL 329

Length = 426

>gnl|CDD|235741 PRK06205, PRK06205, acetyl-CoA acetyltransferase; Provisional

 Score =  138 bits (349), Expect = 1e-36
 Identities = 61/146 (41%), Positives = 88/146 (60%), Gaps = 9/146 (6%)

Query: 1   MSQAPH-VINIRNGIKLNDAEMKDSMVFDGLTD--AFHNIHMGI--TAENIAKKWSISRL 55
           MS       ++R G++    ++ D +     T       +  G+  TAEN+ +++ ISR 
Sbjct: 118 MSNVEFYTTDMRWGVRGGGVQLHDRLARGRETAGGRRFPVPGGMIETAENLRREYGISRE 177

Query: 56  EQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGD-VVVAKDEYPKANTSVDALQKLR 114
           EQD  A +S  +   AQE G FD+EIVPV +  RKGD  VV +DE+P+A+T++++L KLR
Sbjct: 178 EQDALAVRSHQRAVAAQEAGRFDDEIVPVTVPQRKGDPTVVDRDEHPRADTTLESLAKLR 237

Query: 115 PVFQK---DGTVTAGNASGINDGAAA 137
           P+  K   + TVTAGNASG ND AAA
Sbjct: 238 PIMGKQDPEATVTAGNASGQNDAAAA 263

Length = 404

>gnl|CDD|131498 TIGR02445, fadA, fatty oxidation complex, beta subunit FadA

 Score =  137 bits (346), Expect = 2e-36
 Identities = 81/216 (37%), Positives = 119/216 (55%), Gaps = 18/216 (8%)

Query: 214 AIKSGDATAIVAGGQECMSQAP--HVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGI 271
           AI +GDA   + GG E M   P  H ++   G+ L+ A+        G+        MG+
Sbjct: 102 AIMTGDADVCLVGGVEHMGHVPMMHGVDFHPGMSLHVAKAA------GM--------MGL 147

Query: 272 TAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDV-VVAKDEY 330
           TAE + K   ISR +QD +A +S  +   A + G F  EI+P       G +     DE 
Sbjct: 148 TAEMLGKMHGISREQQDAFAARSHARAHAATQEGKFKNEIIPTQGHDADGFLKQFDYDEV 207

Query: 331 PKANTTVEALQKLRPVFQ-KDGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARIVA 389
            +  TTVE+L  LRP F  K+GTVTAG +S ++DGA+A+L+MS + A    ++P ARI +
Sbjct: 208 IRPETTVESLAALRPAFDPKNGTVTAGTSSALSDGASAMLVMSEQRANELGLKPRARIRS 267

Query: 390 MSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYF 425
           M+ AG +P++MG GP+PA    L +AG S  ++  F
Sbjct: 268 MAVAGCDPSIMGYGPVPATQKALKRAGLSISDIDVF 303

This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli [Fatty acid and phospholipid metabolism, Degradation]. Length = 385

>gnl|CDD|102340 PRK06366, PRK06366, acetyl-CoA acetyltransferase; Provisional

 Score =  135 bits (341), Expect = 1e-35
 Identities = 78/209 (37%), Positives = 119/209 (56%), Gaps = 14/209 (6%)

Query: 215 IKSGDATAIVAGGQECMSQAPHVI--NIRNGIK---LNDAEMKDSMVFDGLTDAFHNIHM 269
           I  G+   ++AGG E MS AP ++  ++R G K     + ++ D+M+ DGL DAF+  HM
Sbjct: 102 IMLGERDLVIAGGMENMSNAPFLLPSDLRWGPKHLLHKNYKIDDAMLVDGLIDAFYFEHM 161

Query: 270 GITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDE 329
           G++AE  A+K+ I+R   DEY+ QS  +  +A E G F  EIVP           + +DE
Sbjct: 162 GVSAERTARKYGITREMADEYSVQSYERAIRATESGEFRNEIVPFN--------DLDRDE 213

Query: 330 YPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARIVA 389
             +  TT+E L KL P F K+G +TAGN++ ++DG +A+++ S K      ++P+ARI  
Sbjct: 214 GIR-KTTMEDLAKLPPAFDKNGILTAGNSAQLSDGGSALVMASEKAINEYGLKPIARITG 272

Query: 390 MSSAGVEPTLMGTGPIPAVNAVLAKAGWS 418
             SA ++P      PIPA   +L K   S
Sbjct: 273 YESASLDPLDFVEAPIPATRKLLEKQNKS 301

Length = 388

>gnl|CDD|131483 TIGR02430, pcaF, 3-oxoadipyl-CoA thiolase

 Score =  134 bits (340), Expect = 2e-35
 Identities = 67/143 (46%), Positives = 98/143 (68%), Gaps = 6/143 (4%)

Query: 1   MSQAPHVINIRNGIKLNDAEMKDSMV----FDGLTDAFHNIH-MGITAENIAKKWSISRL 55
           MS+AP V+   +      A+++D+ +     + L  A + +  M  TAEN+A+++ ISR 
Sbjct: 119 MSRAPFVMGKADSAFSRSAKIEDTTIGWRFINPLMKALYGVDSMPETAENVAEEFGISRE 178

Query: 56  EQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGD-VVVAKDEYPKANTSVDALQKLR 114
           +QD +A +SQ +TA AQ  G+F EEIVPVVI  +KG+  VV +DE+P+  T+++ L KL+
Sbjct: 179 DQDAFALRSQQRTAAAQASGFFAEEIVPVVIPQKKGEPTVVDQDEHPRPETTLEGLAKLK 238

Query: 115 PVFQKDGTVTAGNASGINDGAAA 137
           PV + DGTVTAGNASG+NDGAAA
Sbjct: 239 PVVRPDGTVTAGNASGVNDGAAA 261

Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid. Length = 400

>gnl|CDD|180659 PRK06690, PRK06690, acetyl-CoA acetyltransferase; Provisional

 Score =  131 bits (331), Expect = 2e-34
 Identities = 72/212 (33%), Positives = 108/212 (50%), Gaps = 27/212 (12%)

Query: 215 IKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAE 274
           I+ G     +AGG E  S +P                ++   F    +   +  MG+ AE
Sbjct: 96  IQGGAGKCYIAGGVESTSTSP---------------FQNRARFS--PETIGDPDMGVAAE 138

Query: 275 NIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKAN 334
            +A++++I+R  QDEYA  S  +T +A E GY  EEI+          ++   DE  K  
Sbjct: 139 YVAERYNITREMQDEYACLSYKRTLQALEKGYIHEEILSF------NGLL---DESIKKE 189

Query: 335 TTVEAL-QKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSA 393
              E + ++ +P F  +GTVTAGN+ G+NDGA AVL+M    A+    +P+ R V  +  
Sbjct: 190 MNYERIIKRTKPAFLHNGTVTAGNSCGVNDGACAVLVMEEGQARKLGYKPVLRFVRSAVV 249

Query: 394 GVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYF 425
           GV+P L GTGPI AVN +L +     E++ YF
Sbjct: 250 GVDPNLPGTGPIFAVNKLLNEMNMKVEDIDYF 281

Length = 361

>gnl|CDD|181123 PRK07801, PRK07801, acetyl-CoA acetyltransferase; Provisional

 Score =  129 bits (326), Expect = 1e-33
 Identities = 77/211 (36%), Positives = 105/211 (49%), Gaps = 22/211 (10%)

Query: 214 AIKSGDATAIVAGGQECMSQAPHVINIRNGIKL------NDAEMKDSMVFDGLTDAFHNI 267
           A+ SG    +VAGG + MSQ P    +  G +L       +++       D     F   
Sbjct: 102 AVMSGTQDLVVAGGVQNMSQIPISSAMTAGEQLGFTSPFAESKGWLHRYGDQEVSQFRG- 160

Query: 268 HMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAK 327
                AE IA+KW ISR E + +A +S  +   A   G FD EIVPV      G V V  
Sbjct: 161 -----AELIAEKWGISREEMERFALESHRRAFAAIRAGRFDNEIVPV------GGVTV-- 207

Query: 328 DEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARI 387
           DE P+  T++E +  L+P+ +  G +TA  AS I+DGA+AVLL S +  +   + P ARI
Sbjct: 208 DEGPR-ETSLEKMAGLKPLVE-GGRLTAAVASQISDGASAVLLASERAVKRHGLTPRARI 265

Query: 388 VAMSSAGVEPTLMGTGPIPAVNAVLAKAGWS 418
             +S  G +P  M T PIPA    L K G S
Sbjct: 266 HHLSVRGDDPVFMLTAPIPATRYALEKTGLS 296

Length = 382

>gnl|CDD|235675 PRK06025, PRK06025, acetyl-CoA acetyltransferase; Provisional

 Score =  129 bits (325), Expect = 3e-33
 Identities = 82/254 (32%), Positives = 114/254 (44%), Gaps = 54/254 (21%)

Query: 210 LARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLT-------- 261
           LA   I SG    ++AGG E MS                A M    +  G          
Sbjct: 101 LAAAQIMSGMEDLVIAGGTEMMSYT--------------AAMAAEDMAAGKPPLGMGSGN 146

Query: 262 ---DAFH-NIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVIS 317
               A H   H G+  + IA    I+R   D    +SQ + A+A + G FD+ +VPV   
Sbjct: 147 LRLRALHPQSHQGVCGDAIATMEGITREALDALGLESQRRAARAIKEGRFDKSLVPVY-- 204

Query: 318 TRKGDVVVAKDEYPKANTTVEALQKLRPVFQK-------DGTVT---------------- 354
              G V +  +E+P+  TT E L  L+P F         D   T                
Sbjct: 205 RDDGSVALDHEEFPRPQTTAEGLAALKPAFTAIADYPLDDKGTTYRGLINQKYPDLEIKH 264

Query: 355 ---AGNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVNAV 411
              AGN+SG+ DGAAA+LL S   A+   ++P ARIVAM++ G +PTLM   P+PA   V
Sbjct: 265 VHHAGNSSGVVDGAAALLLASKAYAEKHGLKPRARIVAMANMGDDPTLMLNAPVPAAKKV 324

Query: 412 LAKAGWSKEEVGYF 425
           LAKAG +K+++  +
Sbjct: 325 LAKAGLTKDDIDLW 338

Length = 417

>gnl|CDD|183998 PRK13359, PRK13359, beta-ketoadipyl CoA thiolase; Provisional

 Score =  127 bits (321), Expect = 1e-32
 Identities = 63/143 (44%), Positives = 92/143 (64%), Gaps = 7/143 (4%)

Query: 1   MSQAPHVINIRNGIKLNDAEMKDSMV----FDGLTDAFHNIH-MGITAENIAKKWSISRL 55
           MS+AP V+          AE+ D+ +     + L    + +  M  TAEN+A  +++SR 
Sbjct: 120 MSRAPFVMGKAESAFSRQAEIFDTTIGWRFVNPLMKQLYGVDSMPETAENVATDYNVSRA 179

Query: 56  EQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGD-VVVAKDEYPKANTSVDALQKLR 114
           +QD +A +SQ K A+AQ  G   +EIVPV I  +KGD +VV++DE+P+  T+++AL KL+
Sbjct: 180 DQDAFALRSQQKAARAQADGTLAQEIVPVTIPQKKGDPLVVSRDEHPRE-TTLEALAKLK 238

Query: 115 PVFQKDGTVTAGNASGINDGAAA 137
            V + DGTVTAGNASG+NDGA A
Sbjct: 239 GVVRPDGTVTAGNASGVNDGACA 261

Length = 400

>gnl|CDD|180261 PRK05790, PRK05790, putative acyltransferase; Provisional

 Score =  125 bits (317), Expect = 4e-32
 Identities = 47/72 (65%), Positives = 56/72 (77%), Gaps = 1/72 (1%)

Query: 144 TRKGD-VVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKRA 202
            RKGD VVV  DE+P+ +TT E+L KLRP F KDGTVTAGNASGINDGAAAV++MS  +A
Sbjct: 206 QRKGDPVVVDTDEHPRPDTTAESLAKLRPAFDKDGTVTAGNASGINDGAAAVVVMSEAKA 265

Query: 203 QARNIQPLARIA 214
           +   + PLARI 
Sbjct: 266 KELGLTPLARIV 277

Length = 393

>gnl|CDD|223261 COG0183, PaaJ, Acetyl-CoA acetyltransferase [Lipid metabolism]

 Score =  120 bits (304), Expect = 2e-30
 Identities = 58/140 (41%), Positives = 75/140 (53%), Gaps = 12/140 (8%)

Query: 1   MSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEY 60
           MS AP     R G+++ D+   D M  D L DA     MG+TAE  AK++ ISR +QDE 
Sbjct: 122 MSDAPMG---REGVRVLDS-AVDPMFEDPLGDATPGYLMGLTAERYAKRYGISREDQDEV 177

Query: 61  AYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKAN--TSVDALQKLRPVFQ 118
           A +S    A   + G+FD EI P  +        V  D   + +   + D    L P F+
Sbjct: 178 AVKSHKNAAANPKAGFFD-EITPEDVLNS----PVVADPLRRLDCSPTSDGAAALVPAFE 232

Query: 119 K-DGTVTAGNASGINDGAAA 137
           +  GTVTAGNASGINDGAAA
Sbjct: 233 EVGGTVTAGNASGINDGAAA 252

Length = 392

>gnl|CDD|181626 PRK09052, PRK09052, acetyl-CoA acetyltransferase; Provisional

 Score =  120 bits (303), Expect = 3e-30
 Identities = 61/174 (35%), Positives = 88/174 (50%), Gaps = 46/174 (26%)

Query: 39  MGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKD 98
           MG+TAE +A++W +SR +QD +A +S  K   AQ+ G F +EI P  I+ R  D+     
Sbjct: 154 MGLTAEKVAEQWKVSREDQDAFALESHQKAIAAQQAGEFKDEITPYEITERFPDL----- 208

Query: 99  EYPKANTSVDALQKLRPVFQKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEYPK 158
                                                A G++ + TR     V  DE P+
Sbjct: 209 -------------------------------------ATGEVDVKTR----TVDLDEGPR 227

Query: 159 ANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQARNIQPLAR 212
           A+T++E L KL+PVF   G+VTAGN+S  +DGA AV+L+S K  +  N+ PLAR
Sbjct: 228 ADTSLEGLAKLKPVFANKGSVTAGNSSQTSDGAGAVILVSEKALKQFNLTPLAR 281

Length = 399

>gnl|CDD|181145 PRK07850, PRK07850, acetyl-CoA acetyltransferase; Provisional

 Score =  120 bits (303), Expect = 3e-30
 Identities = 61/153 (39%), Positives = 83/153 (54%), Gaps = 9/153 (5%)

Query: 273 AENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRK-------GDVVV 325
           AE IAK+  I+R + D +  +SQ + A+A   G FD EI PV                +V
Sbjct: 151 AERIAKRRGITREDVDAFGLRSQRRAAQAWAEGRFDREISPVQAPVLDEEGQPTGETRLV 210

Query: 326 AKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLA 385
            +D+  + +TT+E L  L+PV  + G  TAG +S I+DGAAAVL M    A+A  ++P A
Sbjct: 211 TRDQGLR-DTTMEGLAGLKPVL-EGGIHTAGTSSQISDGAAAVLWMDEDRARALGLRPRA 268

Query: 386 RIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWS 418
           RIVA +  G EP     GP+ A   VL KAG  
Sbjct: 269 RIVAQALVGAEPYYHLDGPVQATAKVLEKAGMK 301

Length = 387

>gnl|CDD|238383 cd00751, thiolase, Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine

 Score =  119 bits (301), Expect = 6e-30
 Identities = 47/70 (67%), Positives = 58/70 (82%)

Query: 144 TRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQ 203
            RKG VVV +DE P+ +TT+E L KL+P F+KDGTVTAGNASGINDGAAAVLLMS ++A+
Sbjct: 201 GRKGPVVVDRDEGPRPDTTLEKLAKLKPAFKKDGTVTAGNASGINDGAAAVLLMSEEKAK 260

Query: 204 ARNIQPLARI 213
              ++PLARI
Sbjct: 261 ELGLKPLARI 270

They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. Length = 386

>gnl|CDD|238422 cd00826, nondecarbox_cond_enzymes, nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine

 Score =  118 bits (297), Expect = 1e-29
 Identities = 62/175 (35%), Positives = 84/175 (48%), Gaps = 21/175 (12%)

Query: 269 MGITAENIAKKWSI--------SRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRK 320
           M  +AEN AK+  I         R   D +A   Q     A++ G F +E     +  RK
Sbjct: 115 METSAENNAKEKHIDVLINKYGMRACPDAFALAGQAGAEAAEKDGRFKDEFAKFGVKGRK 174

Query: 321 GDVVVAKDEYPK--ANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKTAQ- 377
           GD+    DEY +     +++ + KLRP F K+  +TAGNA G+NDGAAA +LMS   AQ 
Sbjct: 175 GDIHSDADEYIQFGDEASLDEIAKLRPAFDKEDFLTAGNACGLNDGAAAAILMSEAEAQK 234

Query: 378 ------ARNIQPLARIVAMSSAGVEPT----LMGTGPIPAVNAVLAKAGWSKEEV 422
                 AR IQ L  I  M+S   +      + G GPI A    L KAG    ++
Sbjct: 235 HGLQSKAREIQALEMITDMASTFEDKKVIKMVGGDGPIEAARKALEKAGLGIGDL 289

There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. Length = 393

>gnl|CDD|181146 PRK07851, PRK07851, acetyl-CoA acetyltransferase; Provisional

 Score =  118 bits (297), Expect = 3e-29
 Identities = 67/199 (33%), Positives = 90/199 (45%), Gaps = 64/199 (32%)

Query: 37  IHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVA 96
           I MG TAEN+A+   ISR EQDE+  +SQ +  +A   G+F+ EI P             
Sbjct: 171 IAMGQTAENVAQLTGISREEQDEWGVRSQNRAEEAIANGFFEREITP------------- 217

Query: 97  KDEYPKANTSVDALQKLRPVFQKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEY 156
                              V   DGTV                           V+ D+ 
Sbjct: 218 -------------------VTLPDGTV---------------------------VSTDDG 231

Query: 157 PKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQARNIQPLARIAIK 216
           P+A TT E + +L+PVF+ DGTVTAGNA  +NDGAAAV++MS  +A+   + PLARI   
Sbjct: 232 PRAGTTYEKVSQLKPVFRPDGTVTAGNACPLNDGAAAVVIMSDTKARELGLTPLARIV-- 289

Query: 217 SGDATAIVAGGQECMSQAP 235
              +T +     E M   P
Sbjct: 290 ---STGVSGLSPEIMGLGP 305

Length = 406

>gnl|CDD|180595 PRK06504, PRK06504, acetyl-CoA acetyltransferase; Provisional

 Score =  114 bits (288), Expect = 3e-28
 Identities = 64/217 (29%), Positives = 109/217 (50%), Gaps = 12/217 (5%)

Query: 214 AIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIH----M 269
           A+ SG    ++A G E M++ P         K      K      G+ + +  I      
Sbjct: 102 AVMSGTMDIVIAAGVESMTRVPMGSPSTLPAKNGLGHYKSP----GMEERYPGIQFSQFT 157

Query: 270 GITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAK-D 328
           G  AE +AKK+ +S+ + DE+A QS  +   A + G F  EIVP+ I+   G   +   D
Sbjct: 158 G--AEMMAKKYGLSKDQLDEFALQSHQRAIAATQAGKFKAEIVPLEITRADGSGEMHTVD 215

Query: 329 EYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARIV 388
           E  + + T+E +  ++ +  + G +TA  AS I DGA+ V++++ +  +A  ++PLARI 
Sbjct: 216 EGIRFDATLEGIAGVKLI-AEGGRLTAATASQICDGASGVMVVNERGLKALGVKPLARIH 274

Query: 389 AMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYF 425
            M+  G +P +M   P+PA    L KAG   +++  +
Sbjct: 275 HMTVIGGDPVIMLEAPLPATERALKKAGMKIDDIDLY 311

Length = 390

>gnl|CDD|236440 PRK09268, PRK09268, acetyl-CoA acetyltransferase; Provisional

 Score =  114 bits (288), Expect = 6e-28
 Identities = 58/158 (36%), Positives = 82/158 (51%), Gaps = 18/158 (11%)

Query: 269 MGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKD 328
           MG  A   AK+W ISR  QDE A  S    A A + G+FD+ I P       G   + +D
Sbjct: 178 MGEHAAITAKEWGISREAQDELAAASHQNLAAAYDRGFFDDLITPF-----LG---LTRD 229

Query: 329 EYPKANTTVEALQKLRPVFQK--DGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLAR 386
              + ++++E L KL+PVF K    T+TAGN++ + DGA+ VLL S + A    +  LA 
Sbjct: 230 NNLRPDSSLEKLAKLKPVFGKGGRATMTAGNSTPLTDGASVVLLASEEWAAEHGLPVLAY 289

Query: 387 IVAMSSAGV------EPTLMGTGPIPAVNAVLAKAGWS 418
           +V   +A V      E  LM   P  AV  +LA+ G +
Sbjct: 290 LVDAETAAVDFVHGKEGLLM--APAYAVPRLLARNGLT 325

Length = 427

>gnl|CDD|181597 PRK08963, fadI, 3-ketoacyl-CoA thiolase; Reviewed

 Score =  114 bits (287), Expect = 6e-28
 Identities = 79/244 (32%), Positives = 121/244 (49%), Gaps = 31/244 (12%)

Query: 198 SYKRAQARNIQPLARIA--IKSGDATAIVAGGQECMSQAPHVINI-----RNGIKLNDAE 250
           S  RA A + Q +A +A  I +G     +AGG +  S  P  I +     R  + LN A 
Sbjct: 86  SVSRACATSFQAVANVAESIMAGTIDIGIAGGADSSSVLP--IGVSKKLARALVDLNKAR 143

Query: 251 -------------MKDSM-VFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEYAYQSQV 296
                        ++D + V   + +    + MG TAE +AK + ISR EQD  A++S  
Sbjct: 144 TLGQRLKLFSRLRLRDLLPVPPAVAEYSTGLRMGDTAEQMAKTYGISREEQDALAHRSHQ 203

Query: 297 KTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVF-QKDGTVTA 355
             A+A   G  D+E++   +   K    + +D   + ++T+E   KLRP F +K GTVTA
Sbjct: 204 LAAQAWAEGKLDDEVMTAHVPPYKQ--PLEEDNNIRGDSTLEDYAKLRPAFDRKHGTVTA 261

Query: 356 GNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPT---LMGTGPIPAVNAVL 412
            N++ + DGAAAVLLMS   A+A  + PL  + + + A ++     L+  GP  A    L
Sbjct: 262 ANSTPLTDGAAAVLLMSESRAKALGLTPLGYLRSYAFAAIDVWQDMLL--GPAYATPLAL 319

Query: 413 AKAG 416
            +AG
Sbjct: 320 ERAG 323

Length = 428

>gnl|CDD|180775 PRK06954, PRK06954, acetyl-CoA acetyltransferase; Provisional

 Score =  113 bits (283), Expect = 1e-27
 Identities = 57/140 (40%), Positives = 84/140 (60%), Gaps = 5/140 (3%)

Query: 1   MSQAPHVI-NIRNGIKLNDAEMKDSMVFDGLTDAFHNIH-MGITAENIAKKWSISRLEQD 58
           M+ AP+++   R G+++   ++ D M  DGL DA+     MG  AE  A ++  +R  QD
Sbjct: 123 MTNAPYLLPKARGGMRMGHGQVLDHMFLDGLEDAYDKGRLMGTFAEECAGEYGFTREAQD 182

Query: 59  EYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYP-KANTSVDALQKLRPVF 117
            +A +S  +  +A E G F  EI PV ++ +KGD V+ +DE P KAN   + +  L+P F
Sbjct: 183 AFAIESLARAKRANEDGSFAWEIAPVTVAGKKGDTVIDRDEQPFKAN--PEKIPTLKPAF 240

Query: 118 QKDGTVTAGNASGINDGAAA 137
            K GTVTA N+S I+DGAAA
Sbjct: 241 SKTGTVTAANSSSISDGAAA 260

Length = 397

>gnl|CDD|181242 PRK08131, PRK08131, acetyl-CoA acetyltransferase; Provisional

 Score =  112 bits (281), Expect = 3e-27
 Identities = 60/149 (40%), Positives = 89/149 (59%), Gaps = 18/149 (12%)

Query: 1   MSQAPHVINIRNGIKLNDAEMKDSMVFDG----------LTDAFHNIHMGITAENIAKKW 50
           MS+AP V+      K   A  +D+ VFD           +   + N  M  T +N+A ++
Sbjct: 119 MSRAPFVMG-----KAESAFSRDAKVFDTTIGARFPNPKIVAQYGNDSMPETGDNVAAEF 173

Query: 51  SISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVIST--RKGDVVVAKDEYPKANTSVD 108
            ISR + D +A QSQ K   A+E G+F +EI P+ +    +    +VA+DE+P+ +++V+
Sbjct: 174 GISREDADRFAAQSQAKYQAAKEEGFFADEITPIEVPQGRKLPPKLVAEDEHPRPSSTVE 233

Query: 109 ALQKLRPVFQKDGTVTAGNASGINDGAAA 137
           AL KL+P+F+  G VTAGNASGINDGAAA
Sbjct: 234 ALTKLKPLFE-GGVVTAGNASGINDGAAA 261

Length = 401

>gnl|CDD|181625 PRK09051, PRK09051, beta-ketothiolase; Provisional

 Score =  111 bits (280), Expect = 4e-27
 Identities = 45/71 (63%), Positives = 58/71 (81%), Gaps = 1/71 (1%)

Query: 144 TRKGDVVVAKDEYPKANTTVEALQKLRPVFQKD-GTVTAGNASGINDGAAAVLLMSYKRA 202
           TRKG+VV   DE+ +A+TT+E L KL+PVF+K+ GTVTAGNASGINDGAAAV+L     A
Sbjct: 207 TRKGEVVFDTDEHVRADTTLEDLAKLKPVFKKENGTVTAGNASGINDGAAAVVLAEADAA 266

Query: 203 QARNIQPLARI 213
           +AR ++PLAR+
Sbjct: 267 EARGLKPLARL 277

Length = 394

>gnl|CDD|181072 PRK07661, PRK07661, acetyl-CoA acetyltransferase; Provisional

 Score =  111 bits (279), Expect = 5e-27
 Identities = 73/226 (32%), Positives = 109/226 (48%), Gaps = 54/226 (23%)

Query: 39  MGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKD 98
           MG TAE +A K+ ISR +QD +A +S  + AKA   G F +EIVPV ++ R         
Sbjct: 147 MGHTAEQVAVKYGISREDQDAFAVRSHQRAAKALAEGKFADEIVPVDVTLRT-------- 198

Query: 99  EYPKANTSVDALQKLRPVFQKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEYPK 158
                   V    KL                               ++  +  ++DE  +
Sbjct: 199 --------VGENNKL-------------------------------QEETITFSQDEGVR 219

Query: 159 ANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQARNIQPLARIAIKSG 218
           A+TT+E L KLRP F   G+VTAGN+S ++DGAAAVLLM  ++A++  ++PLA+      
Sbjct: 220 ADTTLEILGKLRPAFNVKGSVTAGNSSQMSDGAAAVLLMDREKAESDGLKPLAKFR---- 275

Query: 219 DATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAF 264
            + A+     E M   P +  I   +KL   E+ D  +F+ L +AF
Sbjct: 276 -SFAVAGVPPEVMGIGP-IAAIPKALKLAGLELSDIGLFE-LNEAF 318

Length = 391

>gnl|CDD|180843 PRK07108, PRK07108, acetyl-CoA acetyltransferase; Provisional

 Score =  110 bits (277), Expect = 1e-26
 Identities = 69/202 (34%), Positives = 98/202 (48%), Gaps = 50/202 (24%)

Query: 14  IKLNDAEMKDSMVFDG-LTDAFHNIHMGI--TAENIAKKWSISRLEQDEYAYQSQVKTAK 70
           I     EM   M+ +G L +    I+  +  TAEN+AK++ IS+  QDEY  QSQ + A 
Sbjct: 120 ISCVQNEMNRHMLREGWLVEHKPEIYWSMLQTAENVAKRYGISKERQDEYGVQSQQRAAA 179

Query: 71  AQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTSVDALQKLRPVFQKDGTVTAGNASG 130
           AQ  G FD+EIVP+                                     TVTAG A  
Sbjct: 180 AQAAGRFDDEIVPI-------------------------------------TVTAGVAD- 201

Query: 131 INDGAAAGKLYLFTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDG 190
                A G+  LFT+  +V V+ DE  + +TT+E + K+R      G +TAGNAS  +DG
Sbjct: 202 ----KATGR--LFTK--EVTVSADEGIRPDTTLEGVSKIRSALP-GGVITAGNASQFSDG 252

Query: 191 AAAVLLMSYKRAQARNIQPLAR 212
           A+A ++M+ K A+   +QPL  
Sbjct: 253 ASACVVMNAKVAEREGLQPLGI 274

Length = 392

>gnl|CDD|215161 PLN02287, PLN02287, 3-ketoacyl-CoA thiolase

 Score =  108 bits (271), Expect = 1e-25
 Identities = 46/105 (43%), Positives = 73/105 (69%), Gaps = 6/105 (5%)

Query: 39  MGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPV---VISTRKGD--- 92
           MGIT+EN+A+++ ++R EQD+ A +S  K A A   G F +EIVPV   ++  + G+   
Sbjct: 192 MGITSENVAERFGVTREEQDQAAVESHRKAAAATASGKFKDEIVPVHTKIVDPKTGEEKP 251

Query: 93  VVVAKDEYPKANTSVDALQKLRPVFQKDGTVTAGNASGINDGAAA 137
           +V++ D+  + NT++  L KL+PVF+K+GT TAGN+S ++DGA A
Sbjct: 252 IVISVDDGIRPNTTLADLAKLKPVFKKNGTTTAGNSSQVSDGAGA 296

Length = 452

>gnl|CDD|181592 PRK08947, fadA, 3-ketoacyl-CoA thiolase; Reviewed

 Score =  106 bits (268), Expect = 2e-25
 Identities = 56/176 (31%), Positives = 75/176 (42%), Gaps = 56/176 (31%)

Query: 39  MGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKD 98
           MG+TAE + K   ISR +QD +A +S  +   A + G F  EI+P               
Sbjct: 147 MGLTAEMLGKMHGISREQQDAFAARSHQRAWAATQEGRFKNEIIP--------------- 191

Query: 99  EYPKANTSVDALQKLRPVFQKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEYPK 158
                                                A G L LF          DE  +
Sbjct: 192 --------------------------------TEGHDADGVLKLFDY--------DEVIR 211

Query: 159 ANTTVEALQKLRPVFQ-KDGTVTAGNASGINDGAAAVLLMSYKRAQARNIQPLARI 213
             TTVEAL  LRP F   +GTVTAG +S ++DGA+A+L+MS  RA+   ++P ARI
Sbjct: 212 PETTVEALAALRPAFDPVNGTVTAGTSSALSDGASAMLVMSESRAKELGLKPRARI 267

Length = 387

>gnl|CDD|180563 PRK06445, PRK06445, acetyl-CoA acetyltransferase; Provisional

 Score =  103 bits (259), Expect = 2e-24
 Identities = 50/175 (28%), Positives = 79/175 (45%), Gaps = 56/175 (32%)

Query: 39  MGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKD 98
           MG+TAE +A++  I R E D ++ +S    AKA + GYF +EI+P+ +            
Sbjct: 159 MGLTAEKLAEEAGIKREEMDRWSLRSHQLAAKAIQEGYFKDEILPIEV------------ 206

Query: 99  EYPKANTSVDALQKLRPVFQKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEYPK 158
                              + +G                            VV  D+  +
Sbjct: 207 -------------------EVEGKKK-------------------------VVDVDQSVR 222

Query: 159 ANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQARNIQPLARI 213
            +T++E L KL P F+ DG +TAGN+S +N GA+ VLLMS K  +   ++P+A+I
Sbjct: 223 PDTSLEKLAKLPPAFKPDGVITAGNSSPLNSGASYVLLMSKKAVKKYGLKPMAKI 277

Length = 394

>gnl|CDD|233642 TIGR01930, AcCoA-C-Actrans, acetyl-CoA acetyltransferases

 Score =  102 bits (257), Expect = 4e-24
 Identities = 41/69 (59%), Positives = 53/69 (76%)

Query: 145 RKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQA 204
           RKG VVV+ DE  + NTT+E L KL+P F  +GTVTAGN+S +NDGAAA+LLMS ++A+ 
Sbjct: 203 RKGPVVVSSDEGIRPNTTLEKLAKLKPAFDPNGTVTAGNSSPLNDGAAALLLMSEEKAKE 262

Query: 205 RNIQPLARI 213
             + PLARI
Sbjct: 263 LGLTPLARI 271

This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatty acid oxidation [Fatty acid and phospholipid metabolism, Other]. Length = 386

>gnl|CDD|181624 PRK09050, PRK09050, beta-ketoadipyl CoA thiolase; Validated

 Score =  101 bits (253), Expect = 2e-23
 Identities = 49/82 (59%), Positives = 60/82 (73%), Gaps = 4/82 (4%)

Query: 145 RKGD-VVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQ 203
           +KGD VVV +DE+P+  TT+EAL KL+PVF+ DGTVTAGNASG+NDGAAA+LL S   A+
Sbjct: 213 KKGDPVVVDRDEHPRPETTLEALAKLKPVFRPDGTVTAGNASGVNDGAAALLLASEAAAK 272

Query: 204 ARNIQPLARIAIKSGDATAIVA 225
              + P ARI    G ATA V 
Sbjct: 273 KHGLTPRARIL---GMATAGVE 291

Length = 401

>gnl|CDD|236197 PRK08242, PRK08242, acetyl-CoA acetyltransferase; Validated

 Score = 98.4 bits (246), Expect = 2e-22
 Identities = 57/174 (32%), Positives = 86/174 (49%), Gaps = 37/174 (21%)

Query: 40  GITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDE 99
           GI+A+ IA K+  SR + D YA +SQ + A A   GYF + +VPV    + G  ++  DE
Sbjct: 149 GISADLIATKYGFSREDVDAYAVESQQRAAAAWAEGYFAKSVVPV--KDQNGLTILDHDE 206

Query: 100 YPKANTSVDALQKLRPVFQKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEYPKA 159
           + +  T++++L KL+P F   G +   +A                      VA  +YP  
Sbjct: 207 HMRPGTTMESLAKLKPSFAMMGEMGGFDA----------------------VALQKYP-- 242

Query: 160 NTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQARNIQPLARI 213
              VE +  +           AGN+SGI DGAAAVL+ S +  +A  ++P ARI
Sbjct: 243 --EVERINHVH---------HAGNSSGIVDGAAAVLIGSEEAGKALGLKPRARI 285

Length = 402

>gnl|CDD|181311 PRK08235, PRK08235, acetyl-CoA acetyltransferase; Provisional

 Score = 95.5 bits (238), Expect = 1e-21
 Identities = 44/70 (62%), Positives = 55/70 (78%), Gaps = 1/70 (1%)

Query: 145 RKGD-VVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQ 203
           RKGD +VVAKDE P+ +TT+E L KL+PVF K GT+TAGNA G+NDGAAA++LMS  RA+
Sbjct: 207 RKGDPIVVAKDEAPRKDTTIEKLAKLKPVFDKTGTITAGNAPGVNDGAAALVLMSEDRAK 266

Query: 204 ARNIQPLARI 213
               +PLA I
Sbjct: 267 QEGRKPLATI 276

Length = 393

>gnl|CDD|181265 PRK08170, PRK08170, acetyl-CoA acetyltransferase; Provisional

 Score = 95.1 bits (237), Expect = 3e-21
 Identities = 43/109 (39%), Positives = 64/109 (58%), Gaps = 5/109 (4%)

Query: 29  GLTDAFHNIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVIST 88
           GLTD    ++MG TAE +A ++ I+R + D YA +S  + A AQ  G   +E+VP+    
Sbjct: 167 GLTDPVVGLNMGQTAEVLAHRFGITREQMDAYAARSHQRLAAAQAEGRL-KEVVPLF--D 223

Query: 89  RKGDVVVAKDEYPKANTSVDALQKLRPVFQKD-GTVTAGNASGINDGAA 136
           R G      D+  + ++S++ L KL+P F +  G VTAGN+S I DGA 
Sbjct: 224 RDGK-FYDHDDGVRPDSSMEKLAKLKPFFDRPYGRVTAGNSSQITDGAC 271

Length = 426

>gnl|CDD|168156 PRK05656, PRK05656, acetyl-CoA acetyltransferase; Provisional

 Score = 92.6 bits (230), Expect = 1e-20
 Identities = 52/113 (46%), Positives = 73/113 (64%), Gaps = 8/113 (7%)

Query: 145 RKGD-VVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQ 203
           RKG+ +  A DE P+A TT E+L KL+P F+KDG+VTAGNAS +NDGAAAVLLMS  +A+
Sbjct: 207 RKGEPLAFATDEQPRAGTTAESLAKLKPAFKKDGSVTAGNASSLNDGAAAVLLMSAAKAK 266

Query: 204 ARNIQPLARIA--IKSGDATAI-----VAGGQECMSQAPHVINIRNGIKLNDA 249
           A  +  LA+IA    +G   AI     V+  + C+ +A   +   + I+ N+A
Sbjct: 267 ALGLPVLAKIAAYANAGVDPAIMGIGPVSATRRCLDKAGWSLAELDLIEANEA 319

Length = 393

>gnl|CDD|215722 pfam00108, Thiolase_N, Thiolase, N-terminal domain

 Score = 90.4 bits (225), Expect = 1e-20
 Identities = 38/57 (66%), Positives = 45/57 (78%), Gaps = 2/57 (3%)

Query: 144 TRKGD-VVVAKDEYPKANTTVEALQKLRPVFQKD-GTVTAGNASGINDGAAAVLLMS 198
            RKG  +VV KDE  +  TT+E+L KL+P F K+ GTVTAGNASG+NDGAAAVLLMS
Sbjct: 204 GRKGKPLVVDKDEGIRPGTTLESLAKLKPAFDKENGTVTAGNASGLNDGAAAVLLMS 260

Thiolase is reported to be structurally related to beta-ketoacyl synthase (pfam00109), and also chalcone synthase. Length = 262

>gnl|CDD|102340 PRK06366, PRK06366, acetyl-CoA acetyltransferase; Provisional

 Score = 92.4 bits (229), Expect = 2e-20
 Identities = 55/142 (38%), Positives = 83/142 (58%), Gaps = 14/142 (9%)

Query: 1   MSQAPHVI--NIRNGIK---LNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRL 55
           MS AP ++  ++R G K     + ++ D+M+ DGL DAF+  HMG++AE  A+K+ I+R 
Sbjct: 118 MSNAPFLLPSDLRWGPKHLLHKNYKIDDAMLVDGLIDAFYFEHMGVSAERTARKYGITRE 177

Query: 56  EQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTSVDALQKLRP 115
             DEY+ QS  +  +A E G F  EIVP           + +DE  +  T  D L KL P
Sbjct: 178 MADEYSVQSYERAIRATESGEFRNEIVPF--------NDLDRDEGIRKTTMED-LAKLPP 228

Query: 116 VFQKDGTVTAGNASGINDGAAA 137
            F K+G +TAGN++ ++DG +A
Sbjct: 229 AFDKNGILTAGNSAQLSDGGSA 250

Length = 388

>gnl|CDD|180659 PRK06690, PRK06690, acetyl-CoA acetyltransferase; Provisional

 Score = 89.1 bits (221), Expect = 2e-19
 Identities = 39/100 (39%), Positives = 60/100 (60%), Gaps = 10/100 (10%)

Query: 39  MGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKD 98
           MG+ AE +A++++I+R  QDEYA  S  +T +A E GY  EEI+          ++   D
Sbjct: 133 MGVAAEYVAERYNITREMQDEYACLSYKRTLQALEKGYIHEEILSF------NGLL---D 183

Query: 99  EYPKANTSVDAL-QKLRPVFQKDGTVTAGNASGINDGAAA 137
           E  K   + + + ++ +P F  +GTVTAGN+ G+NDGA A
Sbjct: 184 ESIKKEMNYERIIKRTKPAFLHNGTVTAGNSCGVNDGACA 223

Length = 361

>gnl|CDD|131483 TIGR02430, pcaF, 3-oxoadipyl-CoA thiolase

 Score = 87.5 bits (217), Expect = 8e-19
 Identities = 44/82 (53%), Positives = 56/82 (68%), Gaps = 4/82 (4%)

Query: 145 RKGD-VVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQ 203
           +KG+  VV +DE+P+  TT+E L KL+PV + DGTVTAGNASG+NDGAAA+LL S +  Q
Sbjct: 212 KKGEPTVVDQDEHPRPETTLEGLAKLKPVVRPDGTVTAGNASGVNDGAAALLLASEEAVQ 271

Query: 204 ARNIQPLARIAIKSGDATAIVA 225
              + P ARI      ATA V 
Sbjct: 272 RHGLTPRARIL---AAATAGVE 290

Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid. Length = 400

>gnl|CDD|181597 PRK08963, fadI, 3-ketoacyl-CoA thiolase; Reviewed

 Score = 87.7 bits (218), Expect = 8e-19
 Identities = 39/100 (39%), Positives = 60/100 (60%), Gaps = 3/100 (3%)

Query: 39  MGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKD 98
           MG TAE +AK + ISR EQD  A++S    A+A   G  D+E++   +   K    + +D
Sbjct: 176 MGDTAEQMAKTYGISREEQDALAHRSHQLAAQAWAEGKLDDEVMTAHVPPYKQ--PLEED 233

Query: 99  EYPKANTSVDALQKLRPVF-QKDGTVTAGNASGINDGAAA 137
              + +++++   KLRP F +K GTVTA N++ + DGAAA
Sbjct: 234 NNIRGDSTLEDYAKLRPAFDRKHGTVTAANSTPLTDGAAA 273

Length = 428

>gnl|CDD|131499 TIGR02446, FadI, fatty oxidation complex, beta subunit FadI

 Score = 87.4 bits (216), Expect = 1e-18
 Identities = 73/247 (29%), Positives = 117/247 (47%), Gaps = 25/247 (10%)

Query: 198 SYKRAQARNIQPLARIA--IKSGDATAIVAGGQECMSQAPHVIN---IRNGIKLNDAE-- 250
           S  RA A + Q    +A  I +G     +AGG +  S  P  ++     + + LN A   
Sbjct: 88  SVTRACATSFQSAVNVAESIMAGAIDIGIAGGADSSSVLPIGVSKKLAASLVDLNKARTL 147

Query: 251 -----------MKDSM-VFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEYAYQSQVKT 298
                      +KD M V   + +    + MG TAE +AK + I+R EQD  A++S    
Sbjct: 148 GQKLKVFSRLGLKDLMPVPPAVAEYSTGLSMGQTAEQMAKTYGITRAEQDALAHRSHTLA 207

Query: 299 AKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVF-QKDGTVTAGN 357
           ++A   G    E++       K    +A+D   + N+T+    KLRP F +K G+VTA N
Sbjct: 208 SQAWRDGKLAGEVMTAFPPPYKQ--WIAEDNNIRHNSTLAGYAKLRPAFDRKHGSVTAAN 265

Query: 358 ASGINDGAAAVLLMSYKTAQARNIQPLARI--VAMSSAGVEPTLMGTGPIPAVNAVLAKA 415
           ++ + DGAAAV+LM    A+   ++PL  I   A ++  V   ++  GP  A    L +A
Sbjct: 266 STPLTDGAAAVILMREGRAKELGMEPLGYIRSYAFTAIDVWQDML-MGPSYATPLALQRA 324

Query: 416 GWSKEEV 422
           G +  ++
Sbjct: 325 GLALSDL 331

This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli [Fatty acid and phospholipid metabolism, Degradation]. Length = 430

>gnl|CDD|181145 PRK07850, PRK07850, acetyl-CoA acetyltransferase; Provisional

 Score = 86.3 bits (214), Expect = 2e-18
 Identities = 53/171 (30%), Positives = 75/171 (43%), Gaps = 51/171 (29%)

Query: 43  AENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPK 102
           AE IAK+  I+R + D +  +SQ + A+A   G FD EI PV                  
Sbjct: 151 AERIAKRRGITREDVDAFGLRSQRRAAQAWAEGRFDREISPVQA---------------- 194

Query: 103 ANTSVDALQKLRPVFQKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEYPKANTT 162
                       PV  ++G  T                         +V +D+  + +TT
Sbjct: 195 ------------PVLDEEGQPTG---------------------ETRLVTRDQGLR-DTT 220

Query: 163 VEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQARNIQPLARI 213
           +E L  L+PV  + G  TAG +S I+DGAAAVL M   RA+A  ++P ARI
Sbjct: 221 MEGLAGLKPVL-EGGIHTAGTSSQISDGAAAVLWMDEDRARALGLRPRARI 270

Length = 387

>gnl|CDD|235741 PRK06205, PRK06205, acetyl-CoA acetyltransferase; Provisional

 Score = 85.8 bits (213), Expect = 3e-18
 Identities = 39/75 (52%), Positives = 54/75 (72%), Gaps = 4/75 (5%)

Query: 144 TRKGD-VVVAKDEYPKANTTVEALQKLRPVFQK---DGTVTAGNASGINDGAAAVLLMSY 199
            RKGD  VV +DE+P+A+TT+E+L KLRP+  K   + TVTAGNASG ND AAA L+ + 
Sbjct: 210 QRKGDPTVVDRDEHPRADTTLESLAKLRPIMGKQDPEATVTAGNASGQNDAAAACLVTTE 269

Query: 200 KRAQARNIQPLARIA 214
            +A+   ++PLAR+ 
Sbjct: 270 DKAEELGLRPLARLV 284

Length = 404

>gnl|CDD|236440 PRK09268, PRK09268, acetyl-CoA acetyltransferase; Provisional

 Score = 83.0 bits (206), Expect = 3e-17
 Identities = 39/101 (38%), Positives = 56/101 (55%), Gaps = 10/101 (9%)

Query: 39  MGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKD 98
           MG  A   AK+W ISR  QDE A  S    A A + G+FD+ I P       G   + +D
Sbjct: 178 MGEHAAITAKEWGISREAQDELAAASHQNLAAAYDRGFFDDLITPF-----LG---LTRD 229

Query: 99  EYPKANTSVDALQKLRPVFQK--DGTVTAGNASGINDGAAA 137
              + ++S++ L KL+PVF K    T+TAGN++ + DGA+ 
Sbjct: 230 NNLRPDSSLEKLAKLKPVFGKGGRATMTAGNSTPLTDGASV 270

Length = 427

>gnl|CDD|183998 PRK13359, PRK13359, beta-ketoadipyl CoA thiolase; Provisional

 Score = 82.5 bits (204), Expect = 4e-17
 Identities = 44/82 (53%), Positives = 59/82 (71%), Gaps = 5/82 (6%)

Query: 145 RKGD-VVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQ 203
           +KGD +VV++DE+P+  TT+EAL KL+ V + DGTVTAGNASG+NDGA A+LL S   A+
Sbjct: 213 KKGDPLVVSRDEHPRE-TTLEALAKLKGVVRPDGTVTAGNASGVNDGACALLLASEAAAR 271

Query: 204 ARNIQPLARIAIKSGDATAIVA 225
              ++P AR+    G ATA V 
Sbjct: 272 RHGLKPRARVL---GIATAGVE 290

Length = 400

>gnl|CDD|238422 cd00826, nondecarbox_cond_enzymes, nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine

 Score = 82.5 bits (203), Expect = 4e-17
 Identities = 43/112 (38%), Positives = 57/112 (50%), Gaps = 10/112 (8%)

Query: 39  MGITAENIAKKWSI--------SRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRK 90
           M  +AEN AK+  I         R   D +A   Q     A++ G F +E     +  RK
Sbjct: 115 METSAENNAKEKHIDVLINKYGMRACPDAFALAGQAGAEAAEKDGRFKDEFAKFGVKGRK 174

Query: 91  GDVVVAKDEYPK--ANTSVDALQKLRPVFQKDGTVTAGNASGINDGAAAGKL 140
           GD+    DEY +     S+D + KLRP F K+  +TAGNA G+NDGAAA  L
Sbjct: 175 GDIHSDADEYIQFGDEASLDEIAKLRPAFDKEDFLTAGNACGLNDGAAAAIL 226

There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. Length = 393

>gnl|CDD|235675 PRK06025, PRK06025, acetyl-CoA acetyltransferase; Provisional

 Score = 81.0 bits (200), Expect = 2e-16
 Identities = 55/198 (27%), Positives = 82/198 (41%), Gaps = 37/198 (18%)

Query: 38  HMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAK 97
           H G+  + IA    I+R   D    +SQ + A+A + G FD+ +VPV      G V +  
Sbjct: 157 HQGVCGDAIATMEGITREALDALGLESQRRAARAIKEGRFDKSLVPVY--RDDGSVALDH 214

Query: 98  DEYPKANTSVDALQKLRPVFQKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEYP 157
           +E+P+  T+ + L  L+P F                 A A                D+  
Sbjct: 215 EEFPRPQTTAEGLAALKPAF----------------TAIAD------------YPLDD-- 244

Query: 158 KANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQARNIQPLARIAIKS 217
           K  T    + +  P  +      AGN+SG+ DGAAA+LL S   A+   ++P ARI    
Sbjct: 245 KGTTYRGLINQKYPDLEIKHVHHAGNSSGVVDGAAALLLASKAYAEKHGLKPRARIV--- 301

Query: 218 GDATAIVAGGQECMSQAP 235
             A A +      M  AP
Sbjct: 302 --AMANMGDDPTLMLNAP 317

Length = 417

>gnl|CDD|131498 TIGR02445, fadA, fatty oxidation complex, beta subunit FadA

 Score = 79.6 bits (196), Expect = 3e-16
 Identities = 57/176 (32%), Positives = 78/176 (44%), Gaps = 56/176 (31%)

Query: 39  MGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKD 98
           MG+TAE + K   ISR +QD +A +S  +   A + G F  EI+P               
Sbjct: 145 MGLTAEMLGKMHGISREQQDAFAARSHARAHAATQEGKFKNEIIP--------------- 189

Query: 99  EYPKANTSVDALQKLRPVFQKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEYPK 158
                                    T G+        A G L  F          DE  +
Sbjct: 190 -------------------------TQGH-------DADGFLKQFDY--------DEVIR 209

Query: 159 ANTTVEALQKLRPVFQ-KDGTVTAGNASGINDGAAAVLLMSYKRAQARNIQPLARI 213
             TTVE+L  LRP F  K+GTVTAG +S ++DGA+A+L+MS +RA    ++P ARI
Sbjct: 210 PETTVESLAALRPAFDPKNGTVTAGTSSALSDGASAMLVMSEQRANELGLKPRARI 265

This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli [Fatty acid and phospholipid metabolism, Degradation]. Length = 385

>gnl|CDD|215347 PLN02644, PLN02644, acetyl-CoA C-acetyltransferase

 Score = 76.3 bits (188), Expect = 5e-15
 Identities = 32/66 (48%), Positives = 46/66 (69%), Gaps = 2/66 (3%)

Query: 149 VVVAKDEYPKANTTVEALQKLRPVFQKD-GTVTAGNASGINDGAAAVLLMSYKRAQARNI 207
           V+V KDE          L+KLRP F++D G+VTAGNAS I+DGAAA++L+S ++A    +
Sbjct: 212 VIVDKDEGL-GKFDPAKLRKLRPSFKEDGGSVTAGNASSISDGAAALVLVSGEKALELGL 270

Query: 208 QPLARI 213
           Q +A+I
Sbjct: 271 QVIAKI 276

Length = 394

>gnl|CDD|181123 PRK07801, PRK07801, acetyl-CoA acetyltransferase; Provisional

 Score = 75.9 bits (187), Expect = 5e-15
 Identities = 41/95 (43%), Positives = 56/95 (58%), Gaps = 10/95 (10%)

Query: 43  AENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPK 102
           AE IA+KW ISR E + +A +S  +   A   G FD EIVPV      G V V  DE P+
Sbjct: 161 AELIAEKWGISREEMERFALESHRRAFAAIRAGRFDNEIVPV------GGVTV--DEGPR 212

Query: 103 ANTSVDALQKLRPVFQKDGTVTAGNASGINDGAAA 137
             TS++ +  L+P+ +  G +TA  AS I+DGA+A
Sbjct: 213 -ETSLEKMAGLKPLVE-GGRLTAAVASQISDGASA 245

Length = 382

>gnl|CDD|180595 PRK06504, PRK06504, acetyl-CoA acetyltransferase; Provisional

 Score = 72.1 bits (177), Expect = 1e-13
 Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 2/96 (2%)

Query: 43  AENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAK-DEYP 101
           AE +AKK+ +S+ + DE+A QS  +   A + G F  EIVP+ I+   G   +   DE  
Sbjct: 159 AEMMAKKYGLSKDQLDEFALQSHQRAIAATQAGKFKAEIVPLEITRADGSGEMHTVDEGI 218

Query: 102 KANTSVDALQKLRPVFQKDGTVTAGNASGINDGAAA 137
           + + +++ +  ++ +  + G +TA  AS I DGA+ 
Sbjct: 219 RFDATLEGIAGVKLI-AEGGRLTAATASQICDGASG 253

Length = 390

>gnl|CDD|223261 COG0183, PaaJ, Acetyl-CoA acetyltransferase [Lipid metabolism]

 Score = 70.8 bits (174), Expect = 3e-13
 Identities = 32/69 (46%), Positives = 42/69 (60%), Gaps = 3/69 (4%)

Query: 148 DVVVAKDEYPKAN--TTVEALQKLRPVFQK-DGTVTAGNASGINDGAAAVLLMSYKRAQA 204
           +  V  D   + +   T +    L P F++  GTVTAGNASGINDGAAA+LLMS  +A+ 
Sbjct: 204 NSPVVADPLRRLDCSPTSDGAAALVPAFEEVGGTVTAGNASGINDGAAALLLMSESKAKE 263

Query: 205 RNIQPLARI 213
             + PLA I
Sbjct: 264 LGLAPLAAI 272

Length = 392

>gnl|CDD|181597 PRK08963, fadI, 3-ketoacyl-CoA thiolase; Reviewed

 Score = 70.0 bits (172), Expect = 5e-13
 Identities = 38/101 (37%), Positives = 56/101 (55%), Gaps = 5/101 (4%)

Query: 151 VAKDEYPKANTTVEALQKLRPVF-QKDGTVTAGNASGINDGAAAVLLMSYKRAQARNIQP 209
           + +D   + ++T+E   KLRP F +K GTVTA N++ + DGAAAVLLMS  RA+A  + P
Sbjct: 230 LEEDNNIRGDSTLEDYAKLRPAFDRKHGTVTAANSTPLTDGAAAVLLMSESRAKALGLTP 289

Query: 210 LARIAIKSGDATAIVAGGQECM--SQAPHVINIRNGIKLND 248
           L    ++S    AI       +  + A  +   R G+ L D
Sbjct: 290 LGY--LRSYAFAAIDVWQDMLLGPAYATPLALERAGLTLAD 328

Length = 428

>gnl|CDD|236440 PRK09268, PRK09268, acetyl-CoA acetyltransferase; Provisional

 Score = 68.0 bits (167), Expect = 2e-12
 Identities = 44/127 (34%), Positives = 65/127 (51%), Gaps = 26/127 (20%)

Query: 151 VAKDEYPKANTTVEALQKLRPVFQK--DGTVTAGNASGINDGAAAVLLMSYKRAQARNIQ 208
           + +D   + ++++E L KL+PVF K    T+TAGN++ + DGA+ VLL S + A    + 
Sbjct: 226 LTRDNNLRPDSSLEKLAKLKPVFGKGGRATMTAGNSTPLTDGASVVLLASEEWAAEHGLP 285

Query: 209 PLARIAIKSGDA-TAIV--AGGQECMSQAP--HVINI--RNGIKLNDAEMKDSMVFDGLT 261
            LA +     DA TA V    G+E +  AP   V  +  RNG+ L D        FD   
Sbjct: 286 VLAYLV----DAETAAVDFVHGKEGLLMAPAYAVPRLLARNGLTLQD--------FD--- 330

Query: 262 DAFHNIH 268
             F+ IH
Sbjct: 331 --FYEIH 335

Length = 427

>gnl|CDD|131499 TIGR02446, FadI, fatty oxidation complex, beta subunit FadI

 Score = 65.4 bits (159), Expect = 2e-11
 Identities = 37/102 (36%), Positives = 58/102 (56%), Gaps = 3/102 (2%)

Query: 37  IHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVA 96
           + MG TAE +AK + I+R EQD  A++S    ++A   G    E++       K    +A
Sbjct: 176 LSMGQTAEQMAKTYGITRAEQDALAHRSHTLASQAWRDGKLAGEVMTAFPPPYKQ--WIA 233

Query: 97  KDEYPKANTSVDALQKLRPVF-QKDGTVTAGNASGINDGAAA 137
           +D   + N+++    KLRP F +K G+VTA N++ + DGAAA
Sbjct: 234 EDNNIRHNSTLAGYAKLRPAFDRKHGSVTAANSTPLTDGAAA 275

This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli [Fatty acid and phospholipid metabolism, Degradation]. Length = 430

>gnl|CDD|181265 PRK08170, PRK08170, acetyl-CoA acetyltransferase; Provisional

 Score = 64.7 bits (158), Expect = 3e-11
 Identities = 29/74 (39%), Positives = 42/74 (56%), Gaps = 2/74 (2%)

Query: 142 LFTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKD-GTVTAGNASGINDGAAAVLLMSYK 200
           LF R G      D+  + ++++E L KL+P F +  G VTAGN+S I DGA  +LL S +
Sbjct: 221 LFDRDGKFY-DHDDGVRPDSSMEKLAKLKPFFDRPYGRVTAGNSSQITDGACWLLLASEE 279

Query: 201 RAQARNIQPLARIA 214
             +   + PL RI 
Sbjct: 280 AVKKYGLPPLGRIV 293

Length = 426

>gnl|CDD|145779 pfam02803, Thiolase_C, Thiolase, C-terminal domain

 Score = 60.3 bits (147), Expect = 3e-11
 Identities = 18/45 (40%), Positives = 29/45 (64%)

Query: 381 IQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYF 425
           ++PLARI + ++ GV+P +MG GP  A+   L KAG +  ++  F
Sbjct: 1   LKPLARIRSYATVGVDPAIMGIGPAYAIPKALKKAGLTVNDIDLF 45

Thiolase is reported to be structurally related to beta-ketoacyl synthase (pfam00109), and also chalcone synthase. Length = 123

>gnl|CDD|180659 PRK06690, PRK06690, acetyl-CoA acetyltransferase; Provisional

 Score = 63.6 bits (155), Expect = 5e-11
 Identities = 25/62 (40%), Positives = 37/62 (59%), Gaps = 1/62 (1%)

Query: 154 DEYPKANTTVEAL-QKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQARNIQPLAR 212
           DE  K     E + ++ +P F  +GTVTAGN+ G+NDGA AVL+M   +A+    +P+ R
Sbjct: 183 DESIKKEMNYERIIKRTKPAFLHNGTVTAGNSCGVNDGACAVLVMEEGQARKLGYKPVLR 242

Query: 213 IA 214
             
Sbjct: 243 FV 244

Length = 361

>gnl|CDD|131499 TIGR02446, FadI, fatty oxidation complex, beta subunit FadI

 Score = 56.2 bits (135), Expect = 1e-08
 Identities = 28/64 (43%), Positives = 42/64 (65%), Gaps = 1/64 (1%)

Query: 151 VAKDEYPKANTTVEALQKLRPVF-QKDGTVTAGNASGINDGAAAVLLMSYKRAQARNIQP 209
           +A+D   + N+T+    KLRP F +K G+VTA N++ + DGAAAV+LM   RA+   ++P
Sbjct: 232 IAEDNNIRHNSTLAGYAKLRPAFDRKHGSVTAANSTPLTDGAAAVILMREGRAKELGMEP 291

Query: 210 LARI 213
           L  I
Sbjct: 292 LGYI 295

This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli [Fatty acid and phospholipid metabolism, Degradation]. Length = 430

>gnl|CDD|238201 cd00327, cond_enzymes, Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction

 Score = 54.8 bits (132), Expect = 2e-08
 Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 4/76 (5%)

Query: 355 AGNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSS----AGVEPTLMGTGPIPAVNA 410
                   DGAAA ++ S + A  R   P A IV+ ++    A + P + G G   A   
Sbjct: 94  GSEEFVFGDGAAAAVVESEEHALRRGAHPQAEIVSTAATFDGASMVPAVSGEGLARAARK 153

Query: 411 VLAKAGWSKEEVGYFN 426
            L  AG +  ++ Y  
Sbjct: 154 ALEGAGLTPSDIDYVE 169

Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products. Length = 254

>gnl|CDD|102340 PRK06366, PRK06366, acetyl-CoA acetyltransferase; Provisional

 Score = 53.5 bits (128), Expect = 9e-08
 Identities = 23/53 (43%), Positives = 37/53 (69%)

Query: 161 TTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQARNIQPLARI 213
           TT+E L KL P F K+G +TAGN++ ++DG +A+++ S K      ++P+ARI
Sbjct: 218 TTMEDLAKLPPAFDKNGILTAGNSAQLSDGGSALVMASEKAINEYGLKPIARI 270

Length = 388

>gnl|CDD|223381 COG0304, FabB, 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]

 Score = 51.9 bits (125), Expect = 4e-07
 Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 5/73 (6%)

Query: 364 GAAAVLLMSYKTAQARNIQPLARIVA--MSSAGVE---PTLMGTGPIPAVNAVLAKAGWS 418
           GA A++L   + A AR  +  A IV    +S       P   G G I A+ A LA AG +
Sbjct: 233 GAGALVLEELEHALARGAKIYAEIVGYGTTSDAYHITAPAPDGEGAIRAMRAALADAGLT 292

Query: 419 KEEVGYFNRVATS 431
            E++ Y N   TS
Sbjct: 293 PEDIDYINAHGTS 305

Length = 412

>gnl|CDD|238430 cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II

 Score = 50.2 bits (121), Expect = 1e-06
 Identities = 27/80 (33%), Positives = 37/80 (46%), Gaps = 7/80 (8%)

Query: 359 SGIN--DGAAAVLLMSYKTAQARNIQPLARIV--AMSSAG---VEPTLMGTGPIPAVNAV 411
            G    +GA  ++L S + A+AR  +  A I+    SS       P   G G   A+ A 
Sbjct: 225 DGFVLGEGAGVLVLESLEHAKARGAKIYAEILGYGASSDAYHITAPDPDGEGAARAMRAA 284

Query: 412 LAKAGWSKEEVGYFNRVATS 431
           LA AG S E++ Y N   TS
Sbjct: 285 LADAGLSPEDIDYINAHGTS 304

KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. Length = 406

>gnl|CDD|181123 PRK07801, PRK07801, acetyl-CoA acetyltransferase; Provisional

 Score = 48.9 bits (117), Expect = 2e-06
 Identities = 26/63 (41%), Positives = 39/63 (61%), Gaps = 2/63 (3%)

Query: 151 VAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQARNIQPL 210
           V  DE P+  T++E +  L+P+ +  G +TA  AS I+DGA+AVLL S +  +   + P 
Sbjct: 205 VTVDEGPR-ETSLEKMAGLKPLVE-GGRLTAAVASQISDGASAVLLASERAVKRHGLTPR 262

Query: 211 ARI 213
           ARI
Sbjct: 263 ARI 265

Length = 382

>gnl|CDD|180595 PRK06504, PRK06504, acetyl-CoA acetyltransferase; Provisional

 Score = 47.0 bits (112), Expect = 1e-05
 Identities = 20/60 (33%), Positives = 38/60 (63%), Gaps = 1/60 (1%)

Query: 154 DEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQARNIQPLARI 213
           DE  + + T+E +  ++ +  + G +TA  AS I DGA+ V++++ +  +A  ++PLARI
Sbjct: 215 DEGIRFDATLEGIAGVKLI-AEGGRLTAATASQICDGASGVMVVNERGLKALGVKPLARI 273

Length = 390

>gnl|CDD|200247 TIGR03150, fabF, beta-ketoacyl-acyl-carrier-protein synthase II

 Score = 41.3 bits (98), Expect = 8e-04
 Identities = 31/95 (32%), Positives = 42/95 (44%), Gaps = 15/95 (15%)

Query: 344 RPVFQK--DGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAG-----VE 396
           RP F K  DG V       + +GA  ++L   + A+AR  +  A IV    +G       
Sbjct: 218 RP-FDKDRDGFV-------MGEGAGVLVLEELEHAKARGAKIYAEIVGYGMSGDAYHITA 269

Query: 397 PTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATS 431
           P   G G   A+ A L  AG + E+V Y N   TS
Sbjct: 270 PAPEGEGAARAMRAALKDAGINPEDVDYINAHGTS 304

3-oxoacyl-[acyl-carrier-protein] synthase 2 (KAS-II, FabF) is involved in the condensation step of fatty acid biosynthesis in which the malonyl donor group is decarboxylated and the resulting carbanion used to attack and extend the acyl group attached to the acyl carrier protein. Most genomes encoding fatty acid biosynthesis contain a number of condensing enzymes, often of all three types: 1, 2 and 3. Synthase 2 is mechanistically related to synthase 1 (KAS-I, FabB) containing a number of absolutely conserved catalytic residues in common. This model is based primarily on genes which are found in apparent operons with other essential genes of fatty acid biosynthesis (GenProp0681). The large gap between the trusted cutoff and the noise cutoff contains many genes which are not found adjacent to genes of the fatty acid pathway in genomes that often also contain a better hit to this model. These genes may be involved in other processes such as polyketide biosyntheses. Some genomes contain more than one above-trusted hit to this model which may result from recent paralogous expansions. Second hits to this model which are not next to other fatty acid biosynthesis genes may be involved in other processes. FabB sequences should fall well below the noise cutoff of this model [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 407

>gnl|CDD|235987 PRK07314, PRK07314, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

 Score = 39.8 bits (94), Expect = 0.002
 Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 5/74 (6%)

Query: 363 DGAAAVLLMSYKTAQARNIQPLARIV--AMSSAG---VEPTLMGTGPIPAVNAVLAKAGW 417
           +GA  ++L   + A+AR  +  A +V   M+        P   G G   A+   L  AG 
Sbjct: 232 EGAGILVLEELEHAKARGAKIYAEVVGYGMTGDAYHMTAPAPDGEGAARAMKLALKDAGI 291

Query: 418 SKEEVGYFNRVATS 431
           + E++ Y N   TS
Sbjct: 292 NPEDIDYINAHGTS 305

Length = 411

>gnl|CDD|180839 PRK07103, PRK07103, polyketide beta-ketoacyl:acyl carrier protein synthase; Validated

 Score = 39.2 bits (92), Expect = 0.003
 Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 7/73 (9%)

Query: 364 GAAAVLLMSYKTAQARNIQPLARIV--AMSSAG---VEPTLMGTGPIPAVNAVLAKAGWS 418
              AV+L S ++A+ R  +P A+++  +M        +P+L   G +  + A L +AG  
Sbjct: 240 ACGAVVLESAESARRRGARPYAKLLGWSMRLDANRGPDPSL--EGEMRVIRAALRRAGLG 297

Query: 419 KEEVGYFNRVATS 431
            E++ Y N   T 
Sbjct: 298 PEDIDYVNPHGTG 310

Length = 410

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	441
KOG1391|consensus	396		100.0
KOG1390|consensus	396		100.0
PRK06025	417	acetyl-CoA acetyltransferase; Provisional	100.0
KOG1390|consensus	396		100.0
PRK13359	400	beta-ketoadipyl CoA thiolase; Provisional	100.0
PRK08242	402	acetyl-CoA acetyltransferase; Validated	100.0
PRK09051	394	beta-ketothiolase; Provisional	100.0
PRK08235	393	acetyl-CoA acetyltransferase; Provisional	100.0
TIGR02445	385	fadA fatty oxidation complex, beta subunit FadA. T	100.0
PRK06504	390	acetyl-CoA acetyltransferase; Provisional	100.0
PRK09050	401	beta-ketoadipyl CoA thiolase; Validated	100.0
TIGR02430	400	pcaF beta-ketoadipyl CoA thiolase. Members of this	100.0
PRK06205	404	acetyl-CoA acetyltransferase; Provisional	100.0
PRK08947	387	fadA 3-ketoacyl-CoA thiolase; Reviewed	100.0
PRK06366	388	acetyl-CoA acetyltransferase; Provisional	100.0
PRK06633	392	acetyl-CoA acetyltransferase; Provisional	100.0
TIGR02446	430	FadI fatty oxidation complex, beta subunit FadI. T	100.0
PRK08131	401	acetyl-CoA acetyltransferase; Provisional	100.0
PRK07850	387	acetyl-CoA acetyltransferase; Provisional	100.0
PRK05656	393	acetyl-CoA acetyltransferase; Provisional	100.0
PRK06445	394	acetyl-CoA acetyltransferase; Provisional	100.0
PRK06954	397	acetyl-CoA acetyltransferase; Provisional	100.0
PRK08963	428	fadI 3-ketoacyl-CoA thiolase; Reviewed	100.0
KOG1391|consensus	396		100.0
PRK09052	399	acetyl-CoA acetyltransferase; Provisional	100.0
PRK07661	391	acetyl-CoA acetyltransferase; Provisional	100.0
PRK05790	393	putative acyltransferase; Provisional	100.0
PRK08170	426	acetyl-CoA acetyltransferase; Provisional	100.0
PRK09268	427	acetyl-CoA acetyltransferase; Provisional	100.0
PLN02287	452	3-ketoacyl-CoA thiolase	100.0
TIGR01930	386	AcCoA-C-Actrans acetyl-CoA acetyltransferases. Thi	100.0
cd00751	386	thiolase Thiolase are ubiquitous enzymes that cata	100.0
PRK07108	392	acetyl-CoA acetyltransferase; Provisional	100.0
PRK06690	361	acetyl-CoA acetyltransferase; Provisional	100.0
KOG1389|consensus	435		100.0
PF00108	264	Thiolase_N: Thiolase, N-terminal domain; InterPro:	100.0
KOG1389|consensus	435		100.0
PRK06025	417	acetyl-CoA acetyltransferase; Provisional	100.0
PLN02644	394	acetyl-CoA C-acetyltransferase	100.0
PRK07801	382	acetyl-CoA acetyltransferase; Provisional	100.0
PRK07851	406	acetyl-CoA acetyltransferase; Provisional	100.0
PF00108	264	Thiolase_N: Thiolase, N-terminal domain; InterPro:	100.0
PRK08256	391	lipid-transfer protein; Provisional	99.98
PRK06157	398	acetyl-CoA acetyltransferase; Validated	99.97
PRK06066	385	acetyl-CoA acetyltransferase; Provisional	99.97
PRK08242	402	acetyl-CoA acetyltransferase; Validated	99.97
PRK06065	392	acetyl-CoA acetyltransferase; Provisional	99.97
PRK06289	403	acetyl-CoA acetyltransferase; Provisional	99.97
PRK06365	430	acetyl-CoA acetyltransferase; Provisional	99.97
PRK08142	388	acetyl-CoA acetyltransferase; Provisional	99.97
PRK07937	352	lipid-transfer protein; Provisional	99.97
cd00829	375	SCP-x_thiolase Thiolase domain associated with ste	99.97
PRK13359	400	beta-ketoadipyl CoA thiolase; Provisional	99.97
PRK12578	385	acetyl-CoA acetyltransferase; Provisional	99.97
COG0183	392	PaaJ Acetyl-CoA acetyltransferase [Lipid metabolis	99.96
PRK08313	386	acetyl-CoA acetyltransferase; Provisional	99.96
PRK06158	384	thiolase; Provisional	99.96
cd00826	393	nondecarbox_cond_enzymes nondecarboxylating conden	99.96
PTZ00455	438	3-ketoacyl-CoA thiolase; Provisional	99.96
PRK07516	389	acetyl-CoA acetyltransferase; Provisional	99.96
PRK07855	386	lipid-transfer protein; Provisional	99.96
PRK06059	399	lipid-transfer protein; Provisional	99.96
PRK06064	389	acetyl-CoA acetyltransferase; Provisional	99.96
KOG1392|consensus	465		99.96
PRK09050	401	beta-ketoadipyl CoA thiolase; Validated	99.95
TIGR02430	400	pcaF beta-ketoadipyl CoA thiolase. Members of this	99.95
PRK08235	393	acetyl-CoA acetyltransferase; Provisional	99.94
PRK05656	393	acetyl-CoA acetyltransferase; Provisional	99.94
PRK09051	394	beta-ketothiolase; Provisional	99.94
PRK06205	404	acetyl-CoA acetyltransferase; Provisional	99.94
PRK06504	390	acetyl-CoA acetyltransferase; Provisional	99.93
PRK06954	397	acetyl-CoA acetyltransferase; Provisional	99.93
PRK07850	387	acetyl-CoA acetyltransferase; Provisional	99.93
PRK08131	401	acetyl-CoA acetyltransferase; Provisional	99.93
PRK06633	392	acetyl-CoA acetyltransferase; Provisional	99.93
PRK08257	498	acetyl-CoA acetyltransferase; Validated	99.92
PRK07108	392	acetyl-CoA acetyltransferase; Provisional	99.92
KOG1406|consensus	408		99.92
KOG1392|consensus	465		99.92
PRK09268	427	acetyl-CoA acetyltransferase; Provisional	99.91
PRK09052	399	acetyl-CoA acetyltransferase; Provisional	99.91
PRK06366	388	acetyl-CoA acetyltransferase; Provisional	99.91
TIGR02446	430	FadI fatty oxidation complex, beta subunit FadI. T	99.9
PRK08963	428	fadI 3-ketoacyl-CoA thiolase; Reviewed	99.9
TIGR02445	385	fadA fatty oxidation complex, beta subunit FadA. T	99.9
COG0183	392	PaaJ Acetyl-CoA acetyltransferase [Lipid metabolis	99.9
PRK08170	426	acetyl-CoA acetyltransferase; Provisional	99.89
PRK06445	394	acetyl-CoA acetyltransferase; Provisional	99.89
PRK07661	391	acetyl-CoA acetyltransferase; Provisional	99.88
PRK06690	361	acetyl-CoA acetyltransferase; Provisional	99.87
PRK08947	387	fadA 3-ketoacyl-CoA thiolase; Reviewed	99.86
PLN02287	452	3-ketoacyl-CoA thiolase	99.85
PLN02644	394	acetyl-CoA C-acetyltransferase	99.85
PRK05790	393	putative acyltransferase; Provisional	99.84
PRK07851	406	acetyl-CoA acetyltransferase; Provisional	99.76
TIGR01930	386	AcCoA-C-Actrans acetyl-CoA acetyltransferases. Thi	99.72
cd00751	386	thiolase Thiolase are ubiquitous enzymes that cata	99.7
PRK07801	382	acetyl-CoA acetyltransferase; Provisional	99.64
cd00826	393	nondecarbox_cond_enzymes nondecarboxylating conden	99.34
PF02803	123	Thiolase_C: Thiolase, C-terminal domain; InterPro:	99.22
TIGR03150	407	fabF beta-ketoacyl-acyl-carrier-protein synthase I	99.04
PTZ00050	421	3-oxoacyl-acyl carrier protein synthase; Provision	98.98
PRK06333	424	3-oxoacyl-(acyl carrier protein) synthase II; Revi	98.87
PRK14691	342	3-oxoacyl-(acyl carrier protein) synthase II; Prov	98.86
cd00829	375	SCP-x_thiolase Thiolase domain associated with ste	98.83
PRK07314	411	3-oxoacyl-(acyl carrier protein) synthase II; Revi	98.74
PRK08256	391	lipid-transfer protein; Provisional	98.74
PTZ00455	438	3-ketoacyl-CoA thiolase; Provisional	98.68
PLN02836	437	3-oxoacyl-[acyl-carrier-protein] synthase	98.59
PRK06064	389	acetyl-CoA acetyltransferase; Provisional	98.55
PRK06289	403	acetyl-CoA acetyltransferase; Provisional	98.52
PRK08722	414	3-oxoacyl-(acyl carrier protein) synthase II; Revi	98.51
PRK06157	398	acetyl-CoA acetyltransferase; Validated	98.49
cd00327	254	cond_enzymes Condensing enzymes; Family of enzymes	98.48
PRK06365	430	acetyl-CoA acetyltransferase; Provisional	98.47
cd00828	407	elong_cond_enzymes "elongating" condensing enzymes	98.37
PRK07910	418	3-oxoacyl-(acyl carrier protein) synthase II; Revi	98.3
PRK05952	381	3-oxoacyl-(acyl carrier protein) synthase II; Revi	98.29
PRK12578	385	acetyl-CoA acetyltransferase; Provisional	98.28
PRK07103	410	polyketide beta-ketoacyl:acyl carrier protein synt	98.26
smart00825	424	PKS_KS Beta-ketoacyl synthase. The structure of be	98.25
cd00834	406	KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP)	98.13
cd00833	421	PKS polyketide synthases (PKSs) polymerize simple	98.13
PRK07516	389	acetyl-CoA acetyltransferase; Provisional	98.04
cd00825	332	decarbox_cond_enzymes decarboxylating condensing e	97.97
PRK06059	399	lipid-transfer protein; Provisional	97.92
PRK06501	425	3-oxoacyl-(acyl carrier protein) synthase II; Revi	97.91
PRK09116	405	3-oxoacyl-(acyl carrier protein) synthase II; Revi	97.86
COG0304	412	FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Li	97.84
PLN02787	540	3-oxoacyl-[acyl-carrier-protein] synthase II	97.79
KOG1394|consensus	440		97.67
cd00832	399	CLF Chain-length factor (CLF) is a factor required	97.55
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	97.51
PRK06158	384	thiolase; Provisional	97.5
PRK06519	398	3-oxoacyl-(acyl carrier protein) synthase II; Revi	97.43
PRK08439	406	3-oxoacyl-(acyl carrier protein) synthase II; Revi	97.15
PRK06066	385	acetyl-CoA acetyltransferase; Provisional	97.12
PRK09185	392	3-oxoacyl-(acyl carrier protein) synthase I; Revie	97.01
PRK06147	348	3-oxoacyl-(acyl carrier protein) synthase; Validat	96.64
PRK08313	386	acetyl-CoA acetyltransferase; Provisional	96.52
PRK07967	406	3-oxoacyl-(acyl carrier protein) synthase I; Revie	96.32
COG3321	1061	Polyketide synthase modules and related proteins [	96.06
PRK07855	386	lipid-transfer protein; Provisional	95.18
PRK06065	392	acetyl-CoA acetyltransferase; Provisional	94.8
PF02801	119	Ketoacyl-synt_C: Beta-ketoacyl synthase, C-termina	94.55
PRK07937	352	lipid-transfer protein; Provisional	93.64
PRK08142	388	acetyl-CoA acetyltransferase; Provisional	92.73
PRK07515	372	3-oxoacyl-(acyl carrier protein) synthase III; Rev	88.39
PRK08257	498	acetyl-CoA acetyltransferase; Validated	87.78
cd00830	320	KAS_III Ketoacyl-acyl carrier protein synthase III	83.99
PRK07204	329	3-oxoacyl-(acyl carrier protein) synthase III; Rev	80.88

>KOG1391|consensus

Probab=100.00  E-value=1.2e-45  Score=346.38  Aligned_cols=228  Identities=43%  Similarity=0.670  Sum_probs=218.4

Q ss_pred             chhhHHhhhcCeeEEEEeecccCCCCccchh-cccccccCcccccchhhhcccccccccchHHHHHHHHHHHhCCCHHHH
Q psy4157         209 PLARIAIKSGDATAIVAGGQECMSQAPHVIN-IRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQ  287 (441)
Q Consensus       209 ~~A~~~I~sG~advvla~G~E~ms~~P~~~~-~r~g~~~g~~~~~~d~~~~g~~~~~~~~~ma~~Ae~~a~~~Gitre~l  287 (441)
                      ..+++.|..|+++++|++|.|+||++|+... -|+|.++|....+.|.+|.++++++....|+++||++..+|.|+||+.
T Consensus        99 VNgaQ~I~vgea~ivL~GGtEnMSq~Pf~vRnvRFGT~LG~~y~lED~LW~sLtD~y~kLpMa~TAEnL~~qyKisRee~  178 (396)
T KOG1391|consen   99 VNGAQEICVGEAEIVLCGGTENMSQAPFCVRNVRFGTKLGSDYKLEDSLWVSLTDQYVKLPMAMTAENLAVQYKISREEC  178 (396)
T ss_pred             HhhHHHhhcCcceEEEecCccccccCcceeeeeeeccccccccchhhhHhhhccchhhhcchhhhHHHhhhhheecHHHh
Confidence            4689999999999999999999999999765 788999887667788888899999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhhhCCCCCccccceeeecCCCceeEeccCCCCCCCCHHHHhcCCCccccCCccccCCCCCCCCCcEE
Q psy4157         288 DEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAA  367 (441)
Q Consensus       288 d~~A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~g~~~~~~D~~~r~~~t~e~l~~~~~v~~p~G~lt~~n~~~~sDGAAA  367 (441)
                      |+||++|++++.++++.|.|++||.|++++.++|+..+.-|||+|+.+|+|+|.++||+|+++|++|++|.+.++|||+|
T Consensus       179 DefaL~SQ~~Wkkaq~aG~fn~Ei~pI~~K~kkge~~f~vDEHpRp~TT~E~L~KLppvFkKdG~VtAGnASGi~DGA~A  258 (396)
T KOG1391|consen  179 DEFALQSQQRWKKAQDAGYFNDEIAPIEVKTKKGEQTFQVDEHPRPQTTLEQLQKLPPVFKKDGTVTAGNASGIADGAGA  258 (396)
T ss_pred             hHHHhhhHHHHHhhhhcCcccccccceEEeeccCceeeEecCCCCccchHHHHhhCCchhccCCeeeccccccccCCcee
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEcCHHHHHhcCCCceEEEEEEEeecCCCCcCCCChHHHHHHHHHHcCCCCCCccEEEecCCChhhhh
Q psy4157         368 VLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATSGGIAN  436 (441)
Q Consensus       368 vVLaSe~~A~~lg~~p~a~I~~~~~~~~~p~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~~~  436 (441)
                      ||++|||..++++++|++||++|..++++|..|+.+|++|++.+|+++|+++.|||++|+||+|+....
T Consensus       259 vivAsEdavK~~NlkPLARiVays~vGcdP~IMGIGPvPAI~~vLKksGlkl~DiDl~EvNEAFApQ~L  327 (396)
T KOG1391|consen  259 VIVASEDAVKKHNLKPLARIVAYSVVGCDPSIMGIGPVPAISGVLKKSGLKLKDIDLVEVNEAFAPQYL  327 (396)
T ss_pred             EEEechhHHhhcCCchhhhhheeeeeccChhhccccCcHHHHHHHHHcCCcccccceEEechhhchHHH
Confidence            999999999999999999999999999999999999999999999999999999999999999997654

>KOG1390|consensus

Probab=100.00  E-value=9.5e-46  Score=355.75  Aligned_cols=241  Identities=43%  Similarity=0.621  Sum_probs=222.3

Q ss_pred             hhhHHHHHhccC--cchhhHHhhhcCeeEEEEeecccCCCCccchhcccccccCcccccchhhhc-ccccccccchHHHH
Q psy4157         196 LMSYKRAQARNI--QPLARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFD-GLTDAFHNIHMGIT  272 (441)
Q Consensus       196 l~s~~~a~~~gl--~~~A~~~I~sG~advvla~G~E~ms~~P~~~~~r~g~~~g~~~~~~d~~~~-g~~~~~~~~~ma~~  272 (441)
                      ..+..+.|..|+  +.+|++.|+.|.+|+++++|+|+||+.|+....|.+.++|. ..+.|.+.. |++|.+...+||..
T Consensus        85 ~tTvNkvCaSgmKAv~laaQsI~~G~~divVaGGmEsMS~vP~~~~~R~g~~~G~-~~l~Dgi~~DGL~D~y~~~~MG~~  163 (396)
T KOG1390|consen   85 ATTVNKVCASGMKAVILAAQSIQTGHADIVVAGGMESMSNVPYLYVARGGVKYGG-VQLVDGIVKDGLTDAYDKCHMGIC  163 (396)
T ss_pred             eEeehhhhhhhHHHHHHHHHHHhcCCccEEEecccchhccCcchhhhccCcCcCC-eeeeechhhcchHHHhccCCcchh
Confidence            345556777777  47899999999999999999999999995444688888887 667776554 99999999999999


Q ss_pred             HHHHHHHhCCCHHHHHHHHHHHHHHHHhhhhCCCCCccccceeeecCCCceeEeccCCCCCCCCHHHHhcCCCcccc-CC
Q psy4157         273 AENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQK-DG  351 (441)
Q Consensus       273 Ae~~a~~~Gitre~ld~~A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~g~~~~~~D~~~r~~~t~e~l~~~~~v~~p-~G  351 (441)
                      +|+.+++|+||||+||.||+.||+|+.+||++|.|.+||+|++++.++|.+.+++||.+++....+.+.+++++|.. +|
T Consensus       164 aE~~a~~~~ItRe~QD~yAI~Sy~r~~~Aq~~g~f~~EIVPV~V~~~rg~~~v~~DEe~~k~~~~~~~~~l~~vF~~~gg  243 (396)
T KOG1390|consen  164 AENTAKKYQITREEQDAYAIESYKRSENAQKAGKFDKEIVPVEVKTKRGETVVKKDEEPKKGSNIEKLSKLRPVFKEDGG  243 (396)
T ss_pred             HhhhHHHhCCcHhhhhhHHHHhHHHHHHHHhcCCCCCceeeEEEecCCCcEEeccchhhhcccchhhhccccceeecCCC
Confidence            99999999999999999999999999999999999999999999999999999999999998999999999999964 58


Q ss_pred             ccccCCCCCCCCCcEEEEEcCHHHHHhcCCCceEEEEEEEeecCCCCcCCCChHHHHHHHHHHcCCCCCCccEEEecCCC
Q psy4157         352 TVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATS  431 (441)
Q Consensus       352 ~lt~~n~~~~sDGAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~~p~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~F  431 (441)
                      ++|++|.|.++|||+|+||+|++.++++|++|+++|++|+.++.+|.+|..+|..|++++|+++||..+|||+|||||+|
T Consensus       244 TVTaaNAS~lnDGAAAvvL~s~e~~~~~glkPLArIv~~~dAa~~P~df~iaP~laipk~lk~aG~~~sdVd~~EiNEAF  323 (396)
T KOG1390|consen  244 TVTAANASTLNDGAAAVVLMSGEAAKELGLKPLARIVAWGDAATEPIDFTIAPALAIPKALKKAGLEQSDVDYWEINEAF  323 (396)
T ss_pred             eeccccccccCccceeeEEechhhHhHcCCchHHHHhhhhhhccChhhcccchHHHHHHHHHHcCcchhhhhHHhhhhhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhh
Q psy4157         432 GGIANR  437 (441)
Q Consensus       432 t~~~~~  437 (441)
                      +..+.-
T Consensus       324 s~v~lA  329 (396)
T KOG1390|consen  324 SVVVLA  329 (396)
T ss_pred             hHHHHH
Confidence            987653

>PRK06025 acetyl-CoA acetyltransferase; Provisional

Probab=100.00  E-value=1.3e-43  Score=364.39  Aligned_cols=237  Identities=35%  Similarity=0.498  Sum_probs=203.1

Q ss_pred             hHHHHHhccC--cchhhHHhhhcCeeEEEEeecccCCCCccchh--cccccccCcccccchhhhcccccccccchHHHHH
Q psy4157         198 SYKRAQARNI--QPLARIAIKSGDATAIVAGGQECMSQAPHVIN--IRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITA  273 (441)
Q Consensus       198 s~~~a~~~gl--~~~A~~~I~sG~advvla~G~E~ms~~P~~~~--~r~g~~~g~~~~~~d~~~~g~~~~~~~~~ma~~A  273 (441)
                      +.++.|..|+  +.+|+.+|++|++|++|++|+|+||+.|+...  .+++.   . ..+.+...+++++.+....|+++|
T Consensus        87 tvnr~C~Sgl~ai~~aa~~I~~G~~~~~laGG~EsmS~~P~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~Mg~~a  162 (417)
T PRK06025         87 TLDRFCGGGITSVNLAAAQIMSGMEDLVIAGGTEMMSYTAAMAAEDMAAGK---P-PLGMGSGNLRLRALHPQSHQGVCG  162 (417)
T ss_pred             eeccccchHHHHHHHHHHHHHcCCCCEEEEeeeeccCCCcccccccccCCC---C-cccccccCcccccccCCCCHHHHH
Confidence            3447787776  47899999999999999999999999997322  23221   1 111121111334444456899999


Q ss_pred             HHHHHHhCCCHHHHHHHHHHHHHHHHhhhhCCCCCccccceeeecCCCceeEeccCCCCCCCCHHHHhcCCCccc-----
Q psy4157         274 ENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQ-----  348 (441)
Q Consensus       274 e~~a~~~Gitre~ld~~A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~g~~~~~~D~~~r~~~t~e~l~~~~~v~~-----  348 (441)
                      |+++++||||||+||+||++||+||.+|+++|+|++||+|++  .++|.+++++|+++|+++|+|.|.+++|+|+     
T Consensus       163 e~~a~~~~isRe~~D~~A~~Sh~rA~~A~~~G~f~~eIvPv~--~~~~~~~~~~De~~R~~~t~e~la~L~p~F~~~~~~  240 (417)
T PRK06025        163 DAIATMEGITREALDALGLESQRRAARAIKEGRFDKSLVPVY--RDDGSVALDHEEFPRPQTTAEGLAALKPAFTAIADY  240 (417)
T ss_pred             HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcCeEeeEE--cCCCCEEecCCCCCCCCCCHHHHcCCCCCccccccc
Confidence            999999999999999999999999999999999999999997  3345577999999999999999999999997     


Q ss_pred             ---cCCc------------------cccCCCCCCCCCcEEEEEcCHHHHHhcCCCceEEEEEEEeecCCCCcCCCChHHH
Q psy4157         349 ---KDGT------------------VTAGNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPA  407 (441)
Q Consensus       349 ---p~G~------------------lt~~n~~~~sDGAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~~p~~~~~~~~~A  407 (441)
                         ++|+                  +|++|||+++|||+|+||+|+++|++++++|+++|++++..+.+|..++.++..|
T Consensus       241 ~~~~~g~~~~~~~~~~~~~~~~~~~vTagNss~~sDGAAAvVL~See~A~~lg~~p~a~I~g~~~a~~~p~~~~~~p~~A  320 (417)
T PRK06025        241 PLDDKGTTYRGLINQKYPDLEIKHVHHAGNSSGVVDGAAALLLASKAYAEKHGLKPRARIVAMANMGDDPTLMLNAPVPA  320 (417)
T ss_pred             cccCCccccccccccccccccccccccccccCCCCcceEEEEEecHHHHHHcCCCCcEEEEEEEEecCCchhhcccHHHH
Confidence               4688                  9999999999999999999999999999999999999999999998888899999


Q ss_pred             HHHHHHHcCCCCCCccEEEecCCChhhhhhhhc
Q psy4157         408 VNAVLAKAGWSKEEVGYFNRVATSGGIANRRQE  440 (441)
Q Consensus       408 a~~al~~AGl~~~DID~~Ei~D~Ft~~~~~~~~  440 (441)
                      ++++|+++|++++|||+||+||+|+.+...++|
T Consensus       321 i~~aL~~AGl~~~DID~~ei~eaFa~~~l~~~~  353 (417)
T PRK06025        321 AKKVLAKAGLTKDDIDLWEINEAFAVVAEKFIR  353 (417)
T ss_pred             HHHHHHHcCCCHHHCcEEEEchHHHHHHHHHHH
Confidence            999999999999999999999999999887765

>KOG1390|consensus

Probab=100.00  E-value=2e-43  Score=339.72  Aligned_cols=266  Identities=38%  Similarity=0.553  Sum_probs=210.1

Q ss_pred             CCCCCcccccccCcCCCccccccccccCCcccccCCCchHhhHHHHHHHhCCCHHHHhHHHHhcHHHHHHHHhCCCCCcc
Q psy4157           1 MSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEE   80 (441)
Q Consensus         1 mS~~P~~~~~r~g~~~g~~~~~d~~~~~~l~d~~~~~~mg~~ae~~a~~~~isRe~~D~~a~~s~~ra~~a~~~g~~~~e   80 (441)
                      |||+||+.-.|.|.++|...+.|+++.|||||.|.+.+||.+||++|++|+||||+||+||+.|++|+.+||++|.|+.|
T Consensus       122 MS~vP~~~~~R~g~~~G~~~l~Dgi~~DGL~D~y~~~~MG~~aE~~a~~~~ItRe~QD~yAI~Sy~r~~~Aq~~g~f~~E  201 (396)
T KOG1390|consen  122 MSNVPYLYVARGGVKYGGVQLVDGIVKDGLTDAYDKCHMGICAENTAKKYQITREEQDAYAIESYKRSENAQKAGKFDKE  201 (396)
T ss_pred             hccCcchhhhccCcCcCCeeeeechhhcchHHHhccCCcchhHhhhHHHhCCcHhhhhhHHHHhHHHHHHHHhcCCCCCc
Confidence            99999988899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeeeEeccCCCceeeeccCCCCCCccHHHhhhcCcccccCCceecCCCCCCCCccccchhhhhcccCceeeecccCCCCC
Q psy4157          81 IVPVVISTRKGDVVVAKDEYPKANTSVDALQKLRPVFQKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEYPKAN  160 (441)
Q Consensus        81 i~p~~~~~~~g~~~~~~de~~~~~~~~~~l~~l~p~f~~~g~~t~~~~~~~~dg~~~~~~~~~~~~~~~~~~~d~~~~~~  160 (441)
                      ||||+|+.+||..+                                                        |.+||+++.-
T Consensus       202 IVPV~V~~~rg~~~--------------------------------------------------------v~~DEe~~k~  225 (396)
T KOG1390|consen  202 IVPVEVKTKRGETV--------------------------------------------------------VKKDEEPKKG  225 (396)
T ss_pred             eeeEEEecCCCcEE--------------------------------------------------------eccchhhhcc
Confidence            99999998887544                                                        4555556555


Q ss_pred             CCHHHHhcCCCccCC-CCcccCCCCCCccccchhhhhhhHHHHHhccCcchhhHHhhhcCeeEEEEeecccCCCCccchh
Q psy4157         161 TTVEALQKLRPVFQK-DGTVTAGNASGINDGAAAVLLMSYKRAQARNIQPLARIAIKSGDATAIVAGGQECMSQAPHVIN  239 (441)
Q Consensus       161 ~~~~~~~~l~p~~~~-~g~vtagn~s~~~Dgaa~~ll~s~~~a~~~gl~~~A~~~I~sG~advvla~G~E~ms~~P~~~~  239 (441)
                      .+.+++.+++|+|.+ +||||++|+|.+||||++++|||.+.+.++|+.++|+. +  |..|..  ..++.+..      
T Consensus       226 ~~~~~~~~l~~vF~~~ggTVTaaNAS~lnDGAAAvvL~s~e~~~~~glkPLArI-v--~~~dAa--~~P~df~i------  294 (396)
T KOG1390|consen  226 SNIEKLSKLRPVFKEDGGTVTAANASTLNDGAAAVVLMSGEAAKELGLKPLARI-V--AWGDAA--TEPIDFTI------  294 (396)
T ss_pred             cchhhhccccceeecCCCeeccccccccCccceeeEEechhhHhHcCCchHHHH-h--hhhhhc--cChhhccc------
Confidence            667888888888865 46899999999999999999999999999999999975 1  211210  01111111      


Q ss_pred             cccccccCcccccchhhhcccccccccchHHHHHHHHHHHhCCCHHHHHHH----HHHHHHHHHhhhhCCCCCcccccee
Q psy4157         240 IRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEY----AYQSQVKTAKAQEGGYFDEEIVPVV  315 (441)
Q Consensus       240 ~r~g~~~g~~~~~~d~~~~g~~~~~~~~~ma~~Ae~~a~~~Gitre~ld~~----A~~S~~~A~~A~~~g~f~~ei~Pv~  315 (441)
                                                  .-.++.....++-|+..+|.|.|    ||.-...|.. ...|     +.|-.
T Consensus       295 ----------------------------aP~laipk~lk~aG~~~sdVd~~EiNEAFs~v~lA~i-K~Lg-----ldP~k  340 (396)
T KOG1390|consen  295 ----------------------------APALAIPKALKKAGLEQSDVDYWEINEAFSVVVLANI-KKLG-----LDPSK  340 (396)
T ss_pred             ----------------------------chHHHHHHHHHHcCcchhhhhHHhhhhhhhHHHHHHH-HHhC-----CCHhh
Confidence                                        11334578899999999999999    5555555531 1122     34778


Q ss_pred             eecCCCceeEeccCCCCCCCCHHHHhcCCCcccc-CCccccCCCCCCCCCcEEEEE
Q psy4157         316 ISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQK-DGTVTAGNASGINDGAAAVLL  370 (441)
Q Consensus       316 v~~~~g~~~~~~D~~~r~~~t~e~l~~~~~v~~p-~G~lt~~n~~~~sDGAAAvVL  370 (441)
                      ||.++|.+.+   .||......+-+..+-..+++ +|.+-....|-=.-||.+++|
T Consensus       341 VNv~GGAVal---GHPlG~SGaRi~~tL~~~L~~~~g~~GvAaiCnGGGgasa~vi  393 (396)
T KOG1390|consen  341 VNVHGGAVAL---GHPLGMSGARILVTLLHTLEQKGGKIGVAAICNGGGGASAMVI  393 (396)
T ss_pred             ccCCCceeec---CCCcCCcchhHHHHHHHHHHhhCCceeEEEEecCCCceeeEEE
Confidence            9999999888   899988889988888887775 343333333444446777776

>PRK13359 beta-ketoadipyl CoA thiolase; Provisional

Probab=100.00  E-value=7e-43  Score=359.89  Aligned_cols=230  Identities=40%  Similarity=0.588  Sum_probs=195.7

Q ss_pred             chhhHHhhhcCeeEEEEeecccCCCCccchhcccccccCcccccchhh-----h-cccccccccchHHHHHHHHHHHhCC
Q psy4157         209 PLARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMV-----F-DGLTDAFHNIHMGITAENIAKKWSI  282 (441)
Q Consensus       209 ~~A~~~I~sG~advvla~G~E~ms~~P~~~~~r~g~~~g~~~~~~d~~-----~-~g~~~~~~~~~ma~~Ae~~a~~~Gi  282 (441)
                      .+|+.+|++|++|++|++|+|+||+.|+.... .+..++....+.+..     . +++.+.+....|+++||+++++|||
T Consensus        98 ~~A~~~I~sG~~divlagGvEsmS~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gi  176 (400)
T PRK13359         98 GVAARAIKSGEAALMIAGGVESMSRAPFVMGK-AESAFSRQAEIFDTTIGWRFVNPLMKQLYGVDSMPETAENVATDYNV  176 (400)
T ss_pred             HHHHHHHHcCCCCEEEEeeeeccCCCcccccc-ccccccCCcccccccccccccCCccccccccCCHHHHHHHHHHHhCC
Confidence            37899999999999999999999999963210 011111001111110     0 1233334456899999999999999


Q ss_pred             CHHHHHHHHHHHHHHHHhhhhCCCCCccccceeeecCCCc-eeEeccCCCCCCCCHHHHhcCCCccccCCccccCCCCCC
Q psy4157         283 SRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGD-VVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGI  361 (441)
Q Consensus       283 tre~ld~~A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~g~-~~~~~D~~~r~~~t~e~l~~~~~v~~p~G~lt~~n~~~~  361 (441)
                      |||+||+||++||+|+.+++++|+|++||+|+++++++|. ++++.|+++|+ +|+|+|.+++|+|+|+|+||++|||++
T Consensus       177 sre~~d~~a~~Sh~~a~~a~~~g~~~~ei~pv~~~~~~~~~~~~~~De~~r~-~t~e~l~~l~p~f~~~g~lT~~n~~~~  255 (400)
T PRK13359        177 SRADQDAFALRSQQKAARAQADGTLAQEIVPVTIPQKKGDPLVVSRDEHPRE-TTLEALAKLKGVVRPDGTVTAGNASGV  255 (400)
T ss_pred             CHHHHHHHHHHHHHHHHHHHhcCCCccceeeeeeccCCCCceeecCCCCCCC-CCHHHHhcCCCccCCCCceecccccCc
Confidence            9999999999999998889999999999999998766554 67899999997 999999999999999999999999999


Q ss_pred             CCCcEEEEEcCHHHHHhcCCCceEEEEEEEeecCCCCcCCCChHHHHHHHHHHcCCCCCCccEEEecCCChhhhhhhhc
Q psy4157         362 NDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATSGGIANRRQE  440 (441)
Q Consensus       362 sDGAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~~p~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~~~~~~~  440 (441)
                      +|||+|+||+|++.|++++.+|+++|++++..+.+|..+..++..|++++|+++||+++|||+||+||+|++.++.++|
T Consensus       256 ~DGAaa~vL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~A~~~al~~AGl~~~DID~iei~dafa~~~l~~~e  334 (400)
T PRK13359        256 NDGACALLLASEAAARRHGLKPRARVLGIATAGVEPRVMGIGPAPATQKLLARLGMTLDQFDVIELNEAFASQGLAVLR  334 (400)
T ss_pred             cCceEEEEEecHHHHHHCCCCccEEEEEEEEecCCCCccchhHHHHHHHHHHHhCCCHHHcCcCccCcHhHHHHHHHHH
Confidence            9999999999999999999999999999999888888888899999999999999999999999999999999888775

>PRK08242 acetyl-CoA acetyltransferase; Validated

Probab=100.00  E-value=1.6e-42  Score=356.96  Aligned_cols=218  Identities=38%  Similarity=0.548  Sum_probs=191.0

Q ss_pred             chhhHHhhhcCeeEEEEeecccCCCCccchhcccccccCcccccchhhhccccc-ccccchHHHHHHHHHHHhCCCHHHH
Q psy4157         209 PLARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTD-AFHNIHMGITAENIAKKWSISRLEQ  287 (441)
Q Consensus       209 ~~A~~~I~sG~advvla~G~E~ms~~P~~~~~r~g~~~g~~~~~~d~~~~g~~~-~~~~~~ma~~Ae~~a~~~Gitre~l  287 (441)
                      .+|+.+|++|.+|++|++|+|+||+.|+...   +..+     ..+    ++.. ++....|+++||+|+++||||||+|
T Consensus        99 ~~A~~~I~sG~~d~vLv~G~E~mS~~p~~~~---~~~~-----~~~----~~~~~~~~~~~mg~~Ae~~a~~~gisRe~~  166 (402)
T PRK08242         99 NLAAAKVRSGWDDLVIAGGVESMSRVPMGSD---GGAW-----AMD----PSTNFPTYFVPQGISADLIATKYGFSREDV  166 (402)
T ss_pred             HHHHHHHHcCCCCEEEEEEEEccCCCccccc---Cccc-----ccC----cccccccccCCHHHHHHHHHHHhCCCHHHH
Confidence            3689999999999999999999999996321   1000     001    1111 1223478999999999999999999


Q ss_pred             HHHHHHHHHHHHhhhhCCCCCccccceeeecCCCceeEeccCCCCCCCCHHHHhcCCCcccc----CC------------
Q psy4157         288 DEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQK----DG------------  351 (441)
Q Consensus       288 d~~A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~g~~~~~~D~~~r~~~t~e~l~~~~~v~~p----~G------------  351 (441)
                      |+||++||+||.+|+++|+|++||+|++  .++|.+.+++|+++|+++|+|+|.++||+|+|    +|            
T Consensus       167 d~~A~~Sh~~A~~A~~~g~f~~ei~pv~--~~~~~~~~~~de~~r~~~t~e~l~~l~p~f~~~~~~~g~~~~~~~~~~~~  244 (402)
T PRK08242        167 DAYAVESQQRAAAAWAEGYFAKSVVPVK--DQNGLTILDHDEHMRPGTTMESLAKLKPSFAMMGEMGGFDAVALQKYPEV  244 (402)
T ss_pred             HHHHHHHHHHHHHHHHcCCCcceeeeee--cCCCCEeeCCCCCCCCCCCHHHHhCCCCCccCccccCccccccccccccc
Confidence            9999999999999999999999999997  34555778999999999999999999999987    34            


Q ss_pred             -----ccccCCCCCCCCCcEEEEEcCHHHHHhcCCCceEEEEEEEeecCCCCcCCCChHHHHHHHHHHcCCCCCCccEEE
Q psy4157         352 -----TVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYFN  426 (441)
Q Consensus       352 -----~lt~~n~~~~sDGAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~~p~~~~~~~~~Aa~~al~~AGl~~~DID~~E  426 (441)
                           +||++|||+++|||+|+||+|+++|++++++|+++|++++..+.+|..+..++..|++++|+++||+++|||+||
T Consensus       245 ~~~~~~vTagn~s~~~DGAaAlvl~s~e~A~~~g~~p~a~I~g~~~~~~~~~~~~~~~~~a~~~al~~AGl~~~DID~~e  324 (402)
T PRK08242        245 ERINHVHHAGNSSGIVDGAAAVLIGSEEAGKALGLKPRARIVATATIGSDPTIMLTGPVPATRKALAKAGLTVDDIDLFE  324 (402)
T ss_pred             ccccCceecCcCCCCCCceEEEEEecHHHHHHcCCCCcEEEEEEEEecCCchhhcccHHHHHHHHHHHcCCCHHHCCEEE
Confidence                 699999999999999999999999999999999999999999988988889999999999999999999999999


Q ss_pred             ecCCChhhhhhhhc
Q psy4157         427 RVATSGGIANRRQE  440 (441)
Q Consensus       427 i~D~Ft~~~~~~~~  440 (441)
                      |||+|++.+..++|
T Consensus       325 i~daFa~~~l~~~e  338 (402)
T PRK08242        325 LNEAFASVVLRFMQ  338 (402)
T ss_pred             ecchhhHHHHHHHH
Confidence            99999999988876

>PRK09051 beta-ketothiolase; Provisional

Probab=100.00  E-value=3.4e-42  Score=354.64  Aligned_cols=230  Identities=47%  Similarity=0.701  Sum_probs=197.5

Q ss_pred             hhhHHhhhcCeeEEEEeecccCCCCccchh-cccccccCcccccchhhhcccccccccchHHHHHHHHHHHhCCCHHHHH
Q psy4157         210 LARIAIKSGDATAIVAGGQECMSQAPHVIN-IRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQD  288 (441)
Q Consensus       210 ~A~~~I~sG~advvla~G~E~ms~~P~~~~-~r~g~~~g~~~~~~d~~~~g~~~~~~~~~ma~~Ae~~a~~~Gitre~ld  288 (441)
                      +|+.+|++|.+|++|++|+|+|+..|+... .+++..+++ ....+.+...+.+++....|++.+++||++||+|||++|
T Consensus        99 ~A~~~I~sG~~d~vLvvG~E~mS~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ygitre~~d  177 (394)
T PRK09051         99 SAAQAILLGDADVAIGGGAESMSRAPYLLPAARWGARMGD-AKLVDMMVGALHDPFGTIHMGVTAENVAAKYGISREAQD  177 (394)
T ss_pred             HHHHHHHcCCCCEEEEEeehhcccCcccccccccccccCC-chhhhhhcccccccccCCCHHHHHHHHHHHhCCCHHHHH
Confidence            689999999999999999999999886221 122211221 111111111122333344699999999999999999999


Q ss_pred             HHHHHHHHHHHhhhhCCCCCccccceeeecCCCceeEeccCCCCCCCCHHHHhcCCCccccC-CccccCCCCCCCCCcEE
Q psy4157         289 EYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKD-GTVTAGNASGINDGAAA  367 (441)
Q Consensus       289 ~~A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~g~~~~~~D~~~r~~~t~e~l~~~~~v~~p~-G~lt~~n~~~~sDGAAA  367 (441)
                      +||++||+||.+|+++|+|++||+|+.++.+++++++++|+++|+++|+|+|.+++|+++|+ |+||++||||++|||+|
T Consensus       178 ~~avksh~~A~~a~~~g~~~~ei~p~~~~~~~~~~~~~~da~~r~~~t~e~v~~~~~v~~~~~g~lt~~~~s~~~DGAaa  257 (394)
T PRK09051        178 ALALESHRRAAAAIAAGYFKDQIVPVEIKTRKGEVVFDTDEHVRADTTLEDLAKLKPVFKKENGTVTAGNASGINDGAAA  257 (394)
T ss_pred             HHHHHHHHHHHHHHHcCCCcceeeeeeecCCCCCeEECCCCCCCCCCCHHHHcCCCCcccCCCccEeCCcCCCCCCceEE
Confidence            99999999999999999999999999998877778899999999999999999999999876 89999999999999999


Q ss_pred             EEEcCHHHHHhcCCCceEEEEEEEeecCCCCcCCCChHHHHHHHHHHcCCCCCCccEEEecCCChhhhhhhhc
Q psy4157         368 VLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATSGGIANRRQE  440 (441)
Q Consensus       368 vVLaSe~~A~~lg~~p~a~I~~~~~~~~~p~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~~~~~~~  440 (441)
                      +||+|++.|++++.+|+++|++++..+.+|..+..++..|++++|+++||+++|||+||+||+|++....++|
T Consensus       258 ~vl~s~~~a~~~g~~~~~~I~g~~~~~~~~~~~~~~~~~a~~~al~~agi~~~did~~ei~d~f~~~~~~~~e  330 (394)
T PRK09051        258 VVLAEADAAEARGLKPLARLVGYAHAGVDPEYMGIGPVPATQKALERAGLTVADLDVIEANEAFAAQACAVTR  330 (394)
T ss_pred             EEEecHHHHHHCCCCccEEEEEEEEeccCCCcccccHHHHHHHHHHHcCCCHHHcCEEEecCccHHHHHHHHH
Confidence            9999999999999999999999999988888788889999999999999999999999999999999988876

>PRK08235 acetyl-CoA acetyltransferase; Provisional

Probab=100.00  E-value=2e-42  Score=356.33  Aligned_cols=230  Identities=47%  Similarity=0.689  Sum_probs=196.3

Q ss_pred             hhhHHhhhcCeeEEEEeecccCCCCccchh-cccccccCcccccchhh-hcccccccccchHHHHHHHHHHHhCCCHHHH
Q psy4157         210 LARIAIKSGDATAIVAGGQECMSQAPHVIN-IRNGIKLNDAEMKDSMV-FDGLTDAFHNIHMGITAENIAKKWSISRLEQ  287 (441)
Q Consensus       210 ~A~~~I~sG~advvla~G~E~ms~~P~~~~-~r~g~~~g~~~~~~d~~-~~g~~~~~~~~~ma~~Ae~~a~~~Gitre~l  287 (441)
                      .|+..|++|.+|++|++|+|+|+..|+... .+++..+++ ....+.+ ..++++.+....|+++|++|+++||+|||++
T Consensus        97 ~A~~~I~sG~~d~vLvvG~E~ms~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~ygitre~~  175 (393)
T PRK08235         97 LADQIIRAGDASVIVAGGMESMSNAPYILPGARWGYRMGD-NEVIDLMVADGLTCAFSGVHMGVYGGEVAKELGISREAQ  175 (393)
T ss_pred             HHHHHHHCCCCCEEEEEeeeccccCcccccccccccccCC-chhhhhhcccccccccCCCCHHHHHHHHHHHcCCCHHHH
Confidence            689999999999999999999999886321 122222221 1111111 1122232334579999999999999999999


Q ss_pred             HHHHHHHHHHHHhhhhCCCCCccccceeeecCCCc-eeEeccCCCCCCCCHHHHhcCCCccccCCccccCCCCCCCCCcE
Q psy4157         288 DEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGD-VVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAA  366 (441)
Q Consensus       288 d~~A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~g~-~~~~~D~~~r~~~t~e~l~~~~~v~~p~G~lt~~n~~~~sDGAA  366 (441)
                      |+||++||+||.+|++.|+|++||+|++++.++|. +.+++|+++|+++|+|++++++|+++|+|+||++|||+++||||
T Consensus       176 d~~avksh~~a~~a~~~g~~~~ei~pv~~~~~~~~~~~~~~da~~r~~~t~e~~~~~~~v~~p~g~lt~~~~~~~~DGAa  255 (393)
T PRK08235        176 DEWAYRSHQRAVSAHEEGRFEEEIVPVTIPQRKGDPIVVAKDEAPRKDTTIEKLAKLKPVFDKTGTITAGNAPGVNDGAA  255 (393)
T ss_pred             HHHHHHHHHHHHHHHHcCCCCceEeeeEecCCCCCceEeCCCCCCCCCCCHHHHhcCCCcccCCCcEeccccCCCCCceE
Confidence            99999999999999999999999999999877665 67899999999999999999999999999999999999999999


Q ss_pred             EEEEcCHHHHHhcCCCceEEEEEEEeecCCCCcCCCChHHHHHHHHHHcCCCCCCccEEEecCCChhhhhhhhc
Q psy4157         367 AVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATSGGIANRRQE  440 (441)
Q Consensus       367 AvVLaSe~~A~~lg~~p~a~I~~~~~~~~~p~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~~~~~~~  440 (441)
                      |+||+|++.|++++.+|+++|++++..+.++..+..++..|++++|+++||+++|||++|+||+|++..+.++|
T Consensus       256 a~vl~s~~~A~~~~~~p~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~did~~e~~d~f~~~~l~~~e  329 (393)
T PRK08235        256 ALVLMSEDRAKQEGRKPLATILAHTAIAVEAKDFPRTPGYAINALLEKTGKTVEDIDLFEINEAFAAVALASTE  329 (393)
T ss_pred             EEEEecHHHHHHCCCCceEEEEEEEecccChhhhcchHHHHHHHHHHHhCCCHHHCCeehhcchhHHHHHHHHH
Confidence            99999999999999999999999988777777777788899999999999999999999999999999998887

>TIGR02445 fadA fatty oxidation complex, beta subunit FadA

Probab=100.00  E-value=5.4e-42  Score=352.17  Aligned_cols=220  Identities=35%  Similarity=0.500  Sum_probs=193.5

Q ss_pred             chhhHHhhhcCeeEEEEeecccCCCCccchhcccccccCcccccchhhhcccccccccchHHHHHHHHHHHhCCCHHHHH
Q psy4157         209 PLARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQD  288 (441)
Q Consensus       209 ~~A~~~I~sG~advvla~G~E~ms~~P~~~~~r~g~~~g~~~~~~d~~~~g~~~~~~~~~ma~~Ae~~a~~~Gitre~ld  288 (441)
                      .+|+.+|++|++|++|++|+|+|++.|....    ..+.  ..+.+.    ...  .+..|++.+++||++||+|||++|
T Consensus        97 ~~Aa~~I~sG~~d~vlagG~E~ms~~~~~~~----~~~~--~~~~~~----~~~--~~~~~~~~a~~~~~~ygitre~~d  164 (385)
T TIGR02445        97 HDAARAIMTGDADVCLVGGVEHMGHVPMMHG----VDFH--PGMSLH----VAK--AAGMMGLTAEMLGKMHGISREQQD  164 (385)
T ss_pred             HHHHHHHHCCCCCEEEEeeehhcccCccccC----CCcc--hhHHhh----hcc--ccchHHHHHHHHHHHhCCCHHHHH
Confidence            4789999999999999999999999886311    0010  011110    011  134799999999999999999999


Q ss_pred             HHHHHHHHHHHhhhhCCCCCccccceeeecCCCc-eeEeccCCCCCCCCHHHHhcCCCcccc-CCccccCCCCCCCCCcE
Q psy4157         289 EYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGD-VVVAKDEYPKANTTVEALQKLRPVFQK-DGTVTAGNASGINDGAA  366 (441)
Q Consensus       289 ~~A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~g~-~~~~~D~~~r~~~t~e~l~~~~~v~~p-~G~lt~~n~~~~sDGAA  366 (441)
                      +||++||+||.+|+++|+|++||+|++++.++|. +.+++|+++|+++|+|+++++||+++| +|+||++|||+++|||+
T Consensus       165 ~~A~~sh~~a~~a~~~g~f~nei~pv~~~~~~~~~~~~~~da~~r~~~t~e~~~~~~~v~~p~~g~lt~~~~~~~sDGAa  244 (385)
T TIGR02445       165 AFAARSHARAHAATQEGKFKNEIIPTQGHDADGFLKQFDYDEVIRPETTVESLAALRPAFDPKNGTVTAGTSSALSDGAS  244 (385)
T ss_pred             HHHHHHHHHHHHHHHcCCCccceeeeeeccCCCCceeeCCCCCCCCCCCHHHHhcCCceecCCCCceecccCCCcCCceE
Confidence            9999999999999999999999999998876554 678999999999999999999999998 79999999999999999


Q ss_pred             EEEEcCHHHHHhcCCCceEEEEEEEeecCCCCcCCCChHHHHHHHHHHcCCCCCCccEEEecCCChhhhhhhhc
Q psy4157         367 AVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATSGGIANRRQE  440 (441)
Q Consensus       367 AvVLaSe~~A~~lg~~p~a~I~~~~~~~~~p~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~~~~~~~  440 (441)
                      |+||+|+++|++++.+|+++|++++..+.+|..+..++..|++++|+++||+++|||++||||+|+++++.++|
T Consensus       245 avvL~s~e~A~~~g~~~~a~I~g~~~~~~~~~~~~~~~~~a~~~al~~AGi~p~DId~~Ei~daFa~~~l~~~e  318 (385)
T TIGR02445       245 AMLVMSEQRANELGLKPRARIRSMAVAGCDPSIMGYGPVPATQKALKRAGLSISDIDVFELNEAFAAQALPCLK  318 (385)
T ss_pred             EEEEecHHHHHHCCCCeeEEEEEEEEcCCCCcccchhHHHHHHHHHHHcCCCHHHcCEEEEccccHHHHHHHHH
Confidence            99999999999999999999999999888887777788999999999999999999999999999999999987

This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.

>PRK06504 acetyl-CoA acetyltransferase; Provisional

Probab=100.00  E-value=7.3e-42  Score=351.43  Aligned_cols=225  Identities=28%  Similarity=0.422  Sum_probs=192.4

Q ss_pred             chhhHHhhhcCeeEEEEeecccCCCCccchh--cccccccCcccccchhhhcccccccc--cchHHHHHHHHHHHhCCCH
Q psy4157         209 PLARIAIKSGDATAIVAGGQECMSQAPHVIN--IRNGIKLNDAEMKDSMVFDGLTDAFH--NIHMGITAENIAKKWSISR  284 (441)
Q Consensus       209 ~~A~~~I~sG~advvla~G~E~ms~~P~~~~--~r~g~~~g~~~~~~d~~~~g~~~~~~--~~~ma~~Ae~~a~~~Gitr  284 (441)
                      ..|+++|++|++|++||+|+|+|++.|....  .+++..++. ...     .++.+.+.  ...|+..+++||++||++|
T Consensus        97 ~~A~~~I~sG~~dvvLagGvEsmS~~p~~~~~~~~~~~~~~~-~~~-----~~~~~~~~~~~~~~~~aae~~a~~ygisr  170 (390)
T PRK06504         97 HFAAQAVMSGTMDIVIAAGVESMTRVPMGSPSTLPAKNGLGH-YKS-----PGMEERYPGIQFSQFTGAEMMAKKYGLSK  170 (390)
T ss_pred             HHHHHHHHCCCCCEEEEeeeeecCCCcccccccccccccccc-ccc-----cccccccCCCCCCHHHHHHHHHHHhCcCH
Confidence            3789999999999999999999999986322  121111211 000     11112111  2357788999999999999


Q ss_pred             HHHHHHHHHHHHHHHhhhhCCCCCccccceeeecCCCc-eeEeccCCCCCCCCHHHHhcCCCccccCCccccCCCCCCCC
Q psy4157         285 LEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGD-VVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGIND  363 (441)
Q Consensus       285 e~ld~~A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~g~-~~~~~D~~~r~~~t~e~l~~~~~v~~p~G~lt~~n~~~~sD  363 (441)
                      |+||+||++||+||.+|++.|+|++||+|+++++++|. ..+..|+++|+++|+|+|++++|+.+ +|+||++|||+++|
T Consensus       171 e~~d~~A~ksh~~A~~a~~ag~f~~ei~p~~~~~~~~~~~~~~~De~~r~~~t~e~l~~~~~~~~-~g~lt~~n~s~~~D  249 (390)
T PRK06504        171 DQLDEFALQSHQRAIAATQAGKFKAEIVPLEITRADGSGEMHTVDEGIRFDATLEGIAGVKLIAE-GGRLTAATASQICD  249 (390)
T ss_pred             HHHHHHHHHHHHHHHHhHHcCCCccccccccccCCCCCceEEccCCCCCCCCCHHHHhcCCCCCC-CCCCcCccCCCCCC
Confidence            99999999999999999999999999999998876654 67889999999999999999999964 48999999999999


Q ss_pred             CcEEEEEcCHHHHHhcCCCceEEEEEEEeecCCCCcCCCChHHHHHHHHHHcCCCCCCccEEEecCCChhhhhhhhc
Q psy4157         364 GAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATSGGIANRRQE  440 (441)
Q Consensus       364 GAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~~p~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~~~~~~~  440 (441)
                      ||||+||+|+++|++++++|+++|.++...+.+|..++.+++.|++++|+++||+++|||+|||||||++..+.++|
T Consensus       250 GAaA~vl~s~~~A~~l~~~p~~~i~~~~~~~~~~~~~~~~~~~a~~~a~~~agl~~~Did~~Ei~d~Fa~~~l~~~e  326 (390)
T PRK06504        250 GASGVMVVNERGLKALGVKPLARIHHMTVIGGDPVIMLEAPLPATERALKKAGMKIDDIDLYEVNEAFASVPLAWLK  326 (390)
T ss_pred             ceEEEEEecHHHHHHcCCCceEEEEEEEEeecCchhhhccHHHHHHHHHHHcCCCHHHCCEEEecccchHHHHHHHH
Confidence            99999999999999999999989999998888887888899999999999999999999999999999999999987

>PRK09050 beta-ketoadipyl CoA thiolase; Validated

Probab=100.00  E-value=5.1e-42  Score=353.81  Aligned_cols=229  Identities=44%  Similarity=0.635  Sum_probs=195.7

Q ss_pred             hhhHHhhhcCeeEEEEeecccCCCCccchh-cccccccCcccccchh------hhcccccccccchHHHHHHHHHHHhCC
Q psy4157         210 LARIAIKSGDATAIVAGGQECMSQAPHVIN-IRNGIKLNDAEMKDSM------VFDGLTDAFHNIHMGITAENIAKKWSI  282 (441)
Q Consensus       210 ~A~~~I~sG~advvla~G~E~ms~~P~~~~-~r~g~~~g~~~~~~d~------~~~g~~~~~~~~~ma~~Ae~~a~~~Gi  282 (441)
                      .|+.+|.+|++|++|++|+|+||+.|+... .+.  .++......+.      ...++.+.+....|+++||+|+++||+
T Consensus        99 ~A~~~I~sG~~dvvlagGvEsmS~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Mg~~ae~~a~~~gi  176 (401)
T PRK09050         99 TAARAIKAGEAELMIAGGVESMSRAPFVMGKADS--AFSRQAEIFDTTIGWRFVNPLMKAQYGVDSMPETAENVAEDYNI  176 (401)
T ss_pred             HHHHHHHCCCCCEEEEecccccccCcccccchhh--hcccCcccccccccccccCCccccccccccHHHHHHHHHHHhCC
Confidence            689999999999999999999999986221 110  01000011111      001222333456899999999999999


Q ss_pred             CHHHHHHHHHHHHHHHHhhhhCCCCCccccceeeecCCCc-eeEeccCCCCCCCCHHHHhcCCCccccCCccccCCCCCC
Q psy4157         283 SRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGD-VVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGI  361 (441)
Q Consensus       283 tre~ld~~A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~g~-~~~~~D~~~r~~~t~e~l~~~~~v~~p~G~lt~~n~~~~  361 (441)
                      |||+||+||+.||+|+.+|+++|+|++||+|+++++++|+ +++++|+++|+++|+|+|++++|+|+|+|+||++|||++
T Consensus       177 sre~~D~~A~~S~k~a~~A~~ng~~~~ei~p~~~~~~~~~~~~~~~da~~r~~~t~e~l~~l~~~~~~~g~lt~~n~s~~  256 (401)
T PRK09050        177 SRADQDAFALRSQQRAAAAQAAGFLAEEIVPVTIPQKKGDPVVVDRDEHPRPETTLEALAKLKPVFRPDGTVTAGNASGV  256 (401)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeeeccCCCCceeeCCCCCCCCCCCHHHHhcCCCcccCCCEEeCCCcCCC
Confidence            9999999999999999999999999999999998876554 678899999999999999999999988899999999999


Q ss_pred             CCCcEEEEEcCHHHHHhcCCCceEEEEEEEeecCCCCcCCCChHHHHHHHHHHcCCCCCCccEEEecCCChhhhhhhhc
Q psy4157         362 NDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATSGGIANRRQE  440 (441)
Q Consensus       362 sDGAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~~p~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~~~~~~~  440 (441)
                      +|||+|+||+|++.|++++++|+++|++++..+..|..+..++..|++++|++|||+++|||++||||+|++.++.++|
T Consensus       257 ~DGAaa~vl~s~~~A~~lg~~p~a~I~g~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~DId~~ei~D~f~~~~l~~~e  335 (401)
T PRK09050        257 NDGAAALLLASEAAAKKHGLTPRARILGMATAGVEPRIMGIGPAPATRKLLARLGLTIDQFDVIELNEAFAAQGLAVLR  335 (401)
T ss_pred             cCceEEEEEecHHHHHHCCCCccEEEEEEEEeccCCccccchHHHHHHHHHHHcCCCHHHCCccccCcHhHHHHHHHHH
Confidence            9999999999999999999999999999999887787777788999999999999999999999999999999988876

>TIGR02430 pcaF beta-ketoadipyl CoA thiolase

Probab=100.00  E-value=8.8e-42  Score=351.73  Aligned_cols=230  Identities=44%  Similarity=0.645  Sum_probs=194.3

Q ss_pred             hhhHHhhhcCeeEEEEeecccCCCCccchhcccccccCcccccchh------hhcccccccccchHHHHHHHHHHHhCCC
Q psy4157         210 LARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSM------VFDGLTDAFHNIHMGITAENIAKKWSIS  283 (441)
Q Consensus       210 ~A~~~I~sG~advvla~G~E~ms~~P~~~~~r~g~~~g~~~~~~d~------~~~g~~~~~~~~~ma~~Ae~~a~~~Git  283 (441)
                      .|+.+|.+|++|++|++|+|+|++.|+..+. .+..++......+.      ..+++.+.+....|++.|++|+++||+|
T Consensus        98 ~a~~~I~sG~~d~~la~G~E~ms~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~M~~~ae~~a~~ygis  176 (400)
T TIGR02430        98 MAARAIKAGEADLLIAGGVESMSRAPFVMGK-ADSAFSRSAKIEDTTIGWRFINPLMKALYGVDSMPETAENVAEEFGIS  176 (400)
T ss_pred             HHHHHHHCCCCCEEEEeccccccCCcccccc-cccccccccccccccccccccCcccccccccCcHHHHHHHHHHHhCcC
Confidence            6899999999999999999999999852210 00001000001110      0012233334568999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhhhhCCCCCccccceeeecCCCc-eeEeccCCCCCCCCHHHHhcCCCccccCCccccCCCCCCC
Q psy4157         284 RLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGD-VVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGIN  362 (441)
Q Consensus       284 re~ld~~A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~g~-~~~~~D~~~r~~~t~e~l~~~~~v~~p~G~lt~~n~~~~s  362 (441)
                      ||+||+||++||+||.+|+++|+|++||+|+.+++++++ ..+++|+++|+++|+|++.++||+++|+|+||++|||+++
T Consensus       177 re~~d~~A~~Sh~~a~~a~~~g~~~~ei~pv~vk~~~~~~~~~n~da~~r~~~t~e~l~~~~~v~~p~g~lt~~~~s~~~  256 (400)
T TIGR02430       177 REDQDAFALRSQQRTAAAQASGFFAEEIVPVVIPQKKGEPTVVDQDEHPRPETTLEGLAKLKPVVRPDGTVTAGNASGVN  256 (400)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCCCcceEEEEEeccCCCCceeeCCCCccCCCCCHHHHhcCCCcccCCCCEeccccCCcC
Confidence            999999999999999999999999999999998865443 5689999999999999999999999988999999999999


Q ss_pred             CCcEEEEEcCHHHHHhcCCCceEEEEEEEeecCCCCcCCCChHHHHHHHHHHcCCCCCCccEEEecCCChhhhhhhhc
Q psy4157         363 DGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATSGGIANRRQE  440 (441)
Q Consensus       363 DGAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~~p~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~~~~~~~  440 (441)
                      |||||+||+|++.|++++.+|+++|++++..+.+|..+..++..|++++|+++||+++|||++||||+|++.+..++|
T Consensus       257 DGAaa~vl~s~e~A~~~g~~~~~~I~g~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~DID~~ei~D~f~~~~l~~~e  334 (400)
T TIGR02430       257 DGAAALLLASEEAVQRHGLTPRARILAAATAGVEPRIMGIGPVPATQKLLARAGLSIDQFDVIELNEAFAAQALAVLR  334 (400)
T ss_pred             CceEEEEEecHHHHHHCCCCccEEEEEEEEecCCCccccchHHHHHHHHHHHhCCCHHHCCCcccCcHHHHHHHHHHH
Confidence            999999999999999999999999999998877777777788999999999999999999999999999999888776

Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.

>PRK06205 acetyl-CoA acetyltransferase; Provisional

Probab=100.00  E-value=2.6e-41  Score=349.44  Aligned_cols=230  Identities=39%  Similarity=0.564  Sum_probs=194.0

Q ss_pred             hhhHHhhhcCeeEEEEeecccCCCCccchh-cccccccCcccccchhhh-cccc---c-ccccchHHHHHHHHHHHhCCC
Q psy4157         210 LARIAIKSGDATAIVAGGQECMSQAPHVIN-IRNGIKLNDAEMKDSMVF-DGLT---D-AFHNIHMGITAENIAKKWSIS  283 (441)
Q Consensus       210 ~A~~~I~sG~advvla~G~E~ms~~P~~~~-~r~g~~~g~~~~~~d~~~-~g~~---~-~~~~~~ma~~Ae~~a~~~Git  283 (441)
                      .|+.+|++|.+|++||+|+|+|+..|.... .+++..+++ ....+.+. .++.   . ......|+.++++||++||+|
T Consensus        97 ~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~m~~~a~~~~~~~git  175 (404)
T PRK06205         97 TAAMQVQTGAADVVIAGGAESMSNVEFYTTDMRWGVRGGG-VQLHDRLARGRETAGGRRFPVPGGMIETAENLRREYGIS  175 (404)
T ss_pred             HHHHHHHcCCCCEEEEeeehhhccCcccccccccccccCc-chhhhhhccCcccccccccCCCCCHHHHHHHHHHHhCCC
Confidence            689999999999999999999998875321 222222211 11111110 0111   1 111345777899999999999


Q ss_pred             HHHHHHHHHHHHHHHHhhhhCCCCCccccceeeecCCCc-eeEeccCCCCCCCCHHHHhcCCCcc---ccCCccccCCCC
Q psy4157         284 RLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGD-VVVAKDEYPKANTTVEALQKLRPVF---QKDGTVTAGNAS  359 (441)
Q Consensus       284 re~ld~~A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~g~-~~~~~D~~~r~~~t~e~l~~~~~v~---~p~G~lt~~n~~  359 (441)
                      ||+||+||++||+||.+|+++|+|++||+|++++.++|+ +++++|+++|+++|+|+|+++||++   +|.|+||++|||
T Consensus       176 re~~~~~Av~sh~~A~~a~~~g~~~~ei~pv~~~~~~~~~~~~~~da~~r~~~t~e~~~~~~~v~~~~~p~g~lt~~~~~  255 (404)
T PRK06205        176 REEQDALAVRSHQRAVAAQEAGRFDDEIVPVTVPQRKGDPTVVDRDEHPRADTTLESLAKLRPIMGKQDPEATVTAGNAS  255 (404)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCCCcceeeeeEecCCCCCceEeccCCCCCCCCCHHHHhcCCCcCccCCCCCceeCcccC
Confidence            999999999999999999999999999999998876655 6789999999999999999999999   577899999999


Q ss_pred             CCCCCcEEEEEcCHHHHHhcCCCceEEEEEEEeecCCCCcCCCChHHHHHHHHHHcCCCCCCccEEEecCCChhhhhhhh
Q psy4157         360 GINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATSGGIANRRQ  439 (441)
Q Consensus       360 ~~sDGAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~~p~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~~~~~~  439 (441)
                      +++|||+|+||+|++.|++++++|+++|.+++..+.+|..+..+++.|++++|++|||+++|||++||||+|++++..++
T Consensus       256 ~~~DGAaa~vl~se~~A~~~~~~p~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~Did~~ei~d~f~~~~l~~~  335 (404)
T PRK06205        256 GQNDAAAACLVTTEDKAEELGLRPLARLVSWAVAGVEPSRMGIGPVPATEKALARAGLTLDDIDLIELNEAFAAQVLAVL  335 (404)
T ss_pred             CCCCceeEEEEecHHHHHHCCCCceEEEEEEEEeccCCccccccHHHHHHHHHHHcCCCHHHCCEeeeccHHHHHHHHHH
Confidence            99999999999999999999999999999999998888877789999999999999999999999999999999999887


Q ss_pred             c
Q psy4157         440 E  440 (441)
Q Consensus       440 ~  440 (441)
                      |
T Consensus       336 e  336 (404)
T PRK06205        336 K  336 (404)
T ss_pred             H
Confidence            6

>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed

Probab=100.00  E-value=2.1e-41  Score=348.18  Aligned_cols=220  Identities=35%  Similarity=0.494  Sum_probs=193.1

Q ss_pred             chhhHHhhhcCeeEEEEeecccCCCCccchhcccccccCcccccchhhhcccccccccchHHHHHHHHHHHhCCCHHHHH
Q psy4157         209 PLARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQD  288 (441)
Q Consensus       209 ~~A~~~I~sG~advvla~G~E~ms~~P~~~~~r~g~~~g~~~~~~d~~~~g~~~~~~~~~ma~~Ae~~a~~~Gitre~ld  288 (441)
                      .+|+.+|++|++|++|++|+|+|+..|....    ..+.  ..+.+.    +..  ....|++.|++||++||++||++|
T Consensus        99 ~~A~~~I~sG~~d~vlv~G~E~ms~~~~~~~----~~~~--~~~~~~----~~~--~~~~~~~~a~~~~~~ygisre~~~  166 (387)
T PRK08947         99 HDAARAIMTGDGDVFLIGGVEHMGHVPMNHG----VDFH--PGLSKN----VAK--AAGMMGLTAEMLGKMHGISREQQD  166 (387)
T ss_pred             HHHHHHHHCCCCCEEEEccccccccCccccc----cCcc--hhhhhh----ccc--cchHHHHHHHHHHHHhCCCHHHHH
Confidence            3789999999999999999999999885311    0010  011111    011  134799999999999999999999


Q ss_pred             HHHHHHHHHHHhhhhCCCCCccccceeeecCCCc-eeEeccCCCCCCCCHHHHhcCCCcccc-CCccccCCCCCCCCCcE
Q psy4157         289 EYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGD-VVVAKDEYPKANTTVEALQKLRPVFQK-DGTVTAGNASGINDGAA  366 (441)
Q Consensus       289 ~~A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~g~-~~~~~D~~~r~~~t~e~l~~~~~v~~p-~G~lt~~n~~~~sDGAA  366 (441)
                      +||++||+||.+|+++|+|++||+|+.+++++|. .++++|+++|+++|+|+|++++|+++| +|+||++|||+++|||+
T Consensus       167 ~~avksh~~a~~a~~~g~f~~ei~pv~~~~~~~~~~~~~~da~~r~~~t~e~~~~~~~v~~p~~g~lt~~~~~~~sDGAa  246 (387)
T PRK08947        167 AFAARSHQRAWAATQEGRFKNEIIPTEGHDADGVLKLFDYDEVIRPETTVEALAALRPAFDPVNGTVTAGTSSALSDGAS  246 (387)
T ss_pred             HHHHHHHHHHHHHHHcCCCcceEeeeeecCCCCCceeecCCCCCcCCCCHHHHhcCCceeeCCCCcEEccccCCcCCceE
Confidence            9999999999999999999999999998876654 678999999999999999999999998 78999999999999999


Q ss_pred             EEEEcCHHHHHhcCCCceEEEEEEEeecCCCCcCCCChHHHHHHHHHHcCCCCCCccEEEecCCChhhhhhhhc
Q psy4157         367 AVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATSGGIANRRQE  440 (441)
Q Consensus       367 AvVLaSe~~A~~lg~~p~a~I~~~~~~~~~p~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~~~~~~~  440 (441)
                      |+||+|++.|++++.+|+++|++++..+.++..+..++..+++++|+++||+++|||++||||||++.+..++|
T Consensus       247 Avvl~s~~~A~~~g~~p~~~I~g~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~DId~~El~d~F~~~~l~~~e  320 (387)
T PRK08947        247 AMLVMSESRAKELGLKPRARIRSMAVAGCDPSIMGYGPVPATQKALKRAGLSISDIDVFELNEAFAAQSLPCLK  320 (387)
T ss_pred             EEEEccHHHHHHCCCCccEEEEEEEEcCcCcccccccHHHHHHHHHHHcCCCHHHCCEEEecccchHHHHHHHH
Confidence            99999999999999999999999999887787777788999999999999999999999999999999999987

>PRK06366 acetyl-CoA acetyltransferase; Provisional

Probab=100.00  E-value=1.2e-41  Score=350.26  Aligned_cols=223  Identities=35%  Similarity=0.507  Sum_probs=189.4

Q ss_pred             chhhHHhhhcCeeEEEEeecccCCCCccchh--ccccccc--Ccccccchhhh-cccccccccchHHHHHHHHHHHhCCC
Q psy4157         209 PLARIAIKSGDATAIVAGGQECMSQAPHVIN--IRNGIKL--NDAEMKDSMVF-DGLTDAFHNIHMGITAENIAKKWSIS  283 (441)
Q Consensus       209 ~~A~~~I~sG~advvla~G~E~ms~~P~~~~--~r~g~~~--g~~~~~~d~~~-~g~~~~~~~~~ma~~Ae~~a~~~Git  283 (441)
                      .+|+.+|.+|++|+||++|+|+|++.|....  .+++..+  .......+.+. .++.+++....|++.+++||++||+|
T Consensus        96 ~~Aa~~I~sG~~d~vla~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~mal~A~~~~~~yGit  175 (388)
T PRK06366         96 ESAAREIMLGERDLVIAGGMENMSNAPFLLPSDLRWGPKHLLHKNYKIDDAMLVDGLIDAFYFEHMGVSAERTARKYGIT  175 (388)
T ss_pred             HHHHHHHhcCCCCEEEEEeeEccccCcccccccccccccccccccchhhhhhcccCccccccCccHHHHHHHHHHHcCCC
Confidence            3789999999999999999999998886322  1111100  00001111111 14444433457899999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhhhhCCCCCccccceeeecCCCceeEeccCCCCCCCCHHHHhcCCCccccCCccccCCCCCCCC
Q psy4157         284 RLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGIND  363 (441)
Q Consensus       284 re~ld~~A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~g~~~~~~D~~~r~~~t~e~l~~~~~v~~p~G~lt~~n~~~~sD  363 (441)
                      ||+||+||++||+||.+|.+.|+|++||+|+.     +   ++.|+++| ++|+|+|+++||+++|+|+||++|||+++|
T Consensus       176 rE~~a~vAv~s~~~A~~np~ag~~~~ei~p~~-----~---~~~d~~~r-~~t~e~~~~s~~v~~p~g~lt~~d~s~~sD  246 (388)
T PRK06366        176 REMADEYSVQSYERAIRATESGEFRNEIVPFN-----D---LDRDEGIR-KTTMEDLAKLPPAFDKNGILTAGNSAQLSD  246 (388)
T ss_pred             HHHHHHHHHHHHHHHHhhHhcCCccccccccc-----c---cccccCcc-cCCHHHHhhCCCccCCCCCEehhhcCCccc
Confidence            99999999999999998888889999999985     1   78899999 799999999999999989999999999999


Q ss_pred             CcEEEEEcCHHHHHhcCCCceEEEEEEEeecCCCCcCCCChHHHHHHHHHHcCCCCCCccEEEecCCChhhhhhhhc
Q psy4157         364 GAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATSGGIANRRQE  440 (441)
Q Consensus       364 GAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~~p~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~~~~~~~  440 (441)
                      ||+||||+|+++|++++++|+++|++++..+.+|..+..+++.|++++|+||||+++|||++||||+|++.+..++|
T Consensus       247 GAaAvvl~See~A~~l~~~pv~~I~g~~~~~~~~~~~~~~~~~A~~~al~~Agl~~~DiDv~Ei~daFa~~~l~~le  323 (388)
T PRK06366        247 GGSALVMASEKAINEYGLKPIARITGYESASLDPLDFVEAPIPATRKLLEKQNKSIDYYDLVEHNEAFSIASIIVRD  323 (388)
T ss_pred             ceeEEEEecHHHHHHcCCCcCEEEEEEEEEecCHHHhcccHHHHHHHHHHHcCCCHHHcceeeccchhHHHHHHHHH
Confidence            99999999999999999999999999999988888888888999999999999999999999999999999999988

>PRK06633 acetyl-CoA acetyltransferase; Provisional

Probab=100.00  E-value=3.8e-41  Score=345.99  Aligned_cols=231  Identities=45%  Similarity=0.690  Sum_probs=194.4

Q ss_pred             chhhHHhhhcCeeEEEEeecccCCCCccchhcccccccCcccccchh-hhcccccccccchHHHHHHHHHHHhCCCHHHH
Q psy4157         209 PLARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSM-VFDGLTDAFHNIHMGITAENIAKKWSISRLEQ  287 (441)
Q Consensus       209 ~~A~~~I~sG~advvla~G~E~ms~~P~~~~~r~g~~~g~~~~~~d~-~~~g~~~~~~~~~ma~~Ae~~a~~~Gitre~l  287 (441)
                      ..|+.+|++|++|++|++|+|+|++.|.....+....++. ....+. .++.+.+.+....|++.|++||++||+|||++
T Consensus        97 ~~A~~~I~sG~~dvvla~G~E~ms~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~a~~a~~~~~~~gitre~~  175 (392)
T PRK06633         97 ALAANSIMTGDNEIVIAGGQENMSLGMHGSYIRAGAKFGD-IKMVDLMQYDGLTDVFSGVFMGITAENISKQFNISRQEQ  175 (392)
T ss_pred             HHHHHHHHcCCCCEEEEcccccCCCCCcchhcccccccCc-chhhhhhcccccccccCcchHHHHHHHHHHHhCCCHHHH
Confidence            3789999999999999999999999874211011111111 011111 11122222233479999999999999999999


Q ss_pred             HHHHHHHHHHHHhhhhCCCCCccccceeeecCCCceeEeccCCCCCCCCHHHHhcCCCccccCCccccCCCCCCCCCcEE
Q psy4157         288 DEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAA  367 (441)
Q Consensus       288 d~~A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~g~~~~~~D~~~r~~~t~e~l~~~~~v~~p~G~lt~~n~~~~sDGAAA  367 (441)
                      |+||++||+||.+|...++|++||+|++++.++|..++++|+++|+.+++|.+.+++|+|+|.|+||++|||+++|||++
T Consensus       176 d~~Avksh~~a~~np~A~~~~~ei~p~~v~~~~~~~~~~~d~~~rp~~~~e~l~~l~p~~~~~g~lt~~n~s~~sDGAaa  255 (392)
T PRK06633        176 DEFALSSHKKAAKAQLAGIFKDEILPIEVTIKKTTSLFDHDETVRPDTSLEILSKLRPAFDKNGVVTAGNASSINDGAAC  255 (392)
T ss_pred             HHHHHHHHHHHHHhHHcCCCcCceeeEEeccCCCceeeccCCCCCCCCCHHHHccCCCccCCCCCEechhcCCccCceEE
Confidence            99999999999999999989999999988755555678999999999999999999999998899999999999999999


Q ss_pred             EEEcCHHHHHhcCCCceEEEEEEEeecCCCCcCCCChHHHHHHHHHHcCCCCCCccEEEecCCChhhhhhhhc
Q psy4157         368 VLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATSGGIANRRQE  440 (441)
Q Consensus       368 vVLaSe~~A~~lg~~p~a~I~~~~~~~~~p~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~~~~~~~  440 (441)
                      +||+|++.|++++.+|+++|++++..+.+|..++.+++.|+++||+++||+++|||++|+||+|++..+.+.|
T Consensus       256 lvl~see~A~~~g~~p~a~I~g~~~~~~~~~~~~~~~~~a~~~Al~~AGl~p~DID~~ei~dafa~~~l~~~~  328 (392)
T PRK06633        256 LMVVSEEALKKHNLTPLARIVSYASAGVDPSIMGTAPVPASQKALSKAGWSVNDLEVIEVNEAFAAQSIYVNR  328 (392)
T ss_pred             EEEecHHHHHHCCCCeeEEEEEEEEecCCcchhchHHHHHHHHHHHHcCCCHHHcCeeehhhHHHHHHHHHHh
Confidence            9999999999999999999999999988888887888999999999999999999999999999999887664

>TIGR02446 FadI fatty oxidation complex, beta subunit FadI

Probab=100.00  E-value=7.8e-41  Score=347.65  Aligned_cols=230  Identities=25%  Similarity=0.328  Sum_probs=190.0

Q ss_pred             chhhHHhhhcCeeEEEEeecccCCCCccchhc---c--cc----cccCcc------cccchhhh-ccccccc-ccchHHH
Q psy4157         209 PLARIAIKSGDATAIVAGGQECMSQAPHVINI---R--NG----IKLNDA------EMKDSMVF-DGLTDAF-HNIHMGI  271 (441)
Q Consensus       209 ~~A~~~I~sG~advvla~G~E~ms~~P~~~~~---r--~g----~~~g~~------~~~~d~~~-~g~~~~~-~~~~ma~  271 (441)
                      .+|+.+|++|++|++||+|+|+||+.|+....   +  +.    ...+..      ..+.+.+. ....+.+ +...|++
T Consensus       101 ~~a~~~I~sG~~dvvla~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~  180 (430)
T TIGR02446       101 VNVAESIMAGAIDIGIAGGADSSSVLPIGVSKKLAASLVDLNKARTLGQKLKVFSRLGLKDLMPVPPAVAEYSTGLSMGQ  180 (430)
T ss_pred             HHHHHHHHCCCCCEEEEeeeEcccCCcccccccccccccccccccccCccccccccchhhhhcccCcccccccCCCcHHH
Confidence            47899999999999999999999998853210   0  00    000000      00001000 0111111 1346999


Q ss_pred             HHHHHHHHhCCCHHHHHHHHHHHHHHHHhhhhCCCCCccccceeeecCCCceeEeccCCCCCCCCHHHHhcCCCcccc-C
Q psy4157         272 TAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQK-D  350 (441)
Q Consensus       272 ~Ae~~a~~~Gitre~ld~~A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~g~~~~~~D~~~r~~~t~e~l~~~~~v~~p-~  350 (441)
                      .|++||++||++||+||+||++||+||.+|+++|.|++||+|+.+|++  ...+++|+++|+++|+|+|+++||+|+| .
T Consensus       181 ~ae~~a~~ygisre~~d~~Avksh~~a~~A~~~g~~~~ei~p~~~np~--a~~~~~D~~~r~~~t~e~~~~~~~i~~p~~  258 (430)
T TIGR02446       181 TAEQMAKTYGITRAEQDALAHRSHTLASQAWRDGKLAGEVMTAFPPPY--KQWIAEDNNIRHNSTLAGYAKLRPAFDRKH  258 (430)
T ss_pred             HHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHcCCCCceeeeeeecCC--ceEecccCCCCCCCCHHHHhcCCceecCCC
Confidence            999999999999999999999999999999999999999999987653  2568999999999999999999999987 4


Q ss_pred             CccccCCCCCCCCCcEEEEEcCHHHHHhcCCCceEEEEEEEeecCCC-CcCCCChHHHHHHHHHHcCCCCCCccEEEecC
Q psy4157         351 GTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEP-TLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVA  429 (441)
Q Consensus       351 G~lt~~n~~~~sDGAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~~p-~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D  429 (441)
                      |+||++|||+++|||+|+||+|+++|++++++|+++|++++..+.+| ..++.++..|+++||++|||+++|||+|||||
T Consensus       259 g~lt~~~~~~~~DGAaA~il~se~~A~~l~~~p~~~i~~~~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~Did~~Ei~d  338 (430)
T TIGR02446       259 GSVTAANSTPLTDGAAAVILMREGRAKELGMEPLGYIRSYAFTAIDVWQDMLMGPSYATPLALQRAGLALSDLTLIDMHE  338 (430)
T ss_pred             CceechhcCCCCCceEEEEEecHHHHHHcCCCceEEEEEEEeeccCchHhhcccHHHHHHHHHHHcCCCHHHCCEEEecc
Confidence            89999999999999999999999999999999999999999887777 35677888999999999999999999999999


Q ss_pred             CChhhhhhhhc
Q psy4157         430 TSGGIANRRQE  440 (441)
Q Consensus       430 ~Ft~~~~~~~~  440 (441)
                      ||++.++.++|
T Consensus       339 aFa~~~l~~~e  349 (430)
T TIGR02446       339 AFAAQTLANVQ  349 (430)
T ss_pred             ccHHHHHHHHH
Confidence            99999999887

This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.

>PRK08131 acetyl-CoA acetyltransferase; Provisional

Probab=100.00  E-value=7e-41  Score=345.31  Aligned_cols=229  Identities=37%  Similarity=0.554  Sum_probs=191.6

Q ss_pred             hhhHHhhhcCeeEEEEeecccCCCCccchhcccccccCcccccchhhh------cccccccccchHHHHHHHHHHHhCCC
Q psy4157         210 LARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVF------DGLTDAFHNIHMGITAENIAKKWSIS  283 (441)
Q Consensus       210 ~A~~~I~sG~advvla~G~E~ms~~P~~~~~r~g~~~g~~~~~~d~~~------~g~~~~~~~~~ma~~Ae~~a~~~Git  283 (441)
                      .|+.+|++|++|++||+|+|+|++.|..... .+..++......+...      .++.+.+....|++.|++||++||+|
T Consensus        98 ~A~~~I~sG~~dvvlagG~Esms~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~mg~~ae~~~~~ygit  176 (401)
T PRK08131         98 DAARAITCGEGDLYLAGGVESMSRAPFVMGK-AESAFSRDAKVFDTTIGARFPNPKIVAQYGNDSMPETGDNVAAEFGIS  176 (401)
T ss_pred             HHHHHHHCCCCCEEEEEEecCCCCCcccccc-cccccccCcchhhhhhcccccCcccccccccCCHHHHHHHHHHHhCCC
Confidence            7899999999999999999999999863210 0000000001111100      11122233457999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhhhhCCCCCccccceeeecC-CC-ceeEeccCCCCCCCCHHHHhcCCCccccCCccccCCCCCC
Q psy4157         284 RLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTR-KG-DVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGI  361 (441)
Q Consensus       284 re~ld~~A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~-~g-~~~~~~D~~~r~~~t~e~l~~~~~v~~p~G~lt~~n~~~~  361 (441)
                      ||++|+||++||+|+.+++++++|++||+|+++.+. ++ ...+..|+++|+++|+|.|.++||+| ++|+||++|||++
T Consensus       177 re~~d~vA~~S~~~~~~a~~~~~~~~~i~pi~v~~~~~~~~~~v~~De~~r~~~~~e~L~~l~p~f-~~g~lt~~~~s~~  255 (401)
T PRK08131        177 REDADRFAAQSQAKYQAAKEEGFFADEITPIEVPQGRKLPPKLVAEDEHPRPSSTVEALTKLKPLF-EGGVVTAGNASGI  255 (401)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCCCCceeeEEeccccCCCceEEecCCCCCCCCCHHHHhcCCCCC-CCCCccCCcCCCC
Confidence            999999999999999999999999999999988652 22 35688999999999999999999999 4599999999999


Q ss_pred             CCCcEEEEEcCHHHHHhcCCCceEEEEEEEeecCCCCcCCCChHHHHHHHHHHcCCCCCCccEEEecCCChhhhhhhhc
Q psy4157         362 NDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATSGGIANRRQE  440 (441)
Q Consensus       362 sDGAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~~p~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~~~~~~~  440 (441)
                      +|||+|+||+|+++|++++++|+++|++++..+.+|..+..+++.|++++|+++||+++|||++||||+|++..+.++|
T Consensus       256 ~DGAaa~vl~s~~~a~~~~~~p~~~i~g~~~~~~~~~~~~~~~~~a~~~a~~~agl~~~did~~ei~d~Fa~~~l~~~e  334 (401)
T PRK08131        256 NDGAAALLIGSRAAGEKYGLKPMARILSSAAAGVEPRIMGIGPVEAIKKALARAGLTLDDMDIIEINEAFASQVLGCLK  334 (401)
T ss_pred             CCceEEEEEeeHHHHHHcCCCceEEEEEEEEeccCCccccchHHHHHHHHHHHcCCCHHHCCeehhccHHHHHHHHHHH
Confidence            9999999999999999999999999999999988888888899999999999999999999999999999999988876

>PRK07850 acetyl-CoA acetyltransferase; Provisional

Probab=100.00  E-value=1.7e-40  Score=341.20  Aligned_cols=219  Identities=35%  Similarity=0.432  Sum_probs=187.3

Q ss_pred             hhhHHhhhcCeeEEEEeecccCCCCccchhcccccccCcccccchhhhcccccccccchHHHHHHHHHHHhCCCHHHHHH
Q psy4157         210 LARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDE  289 (441)
Q Consensus       210 ~A~~~I~sG~advvla~G~E~ms~~P~~~~~r~g~~~g~~~~~~d~~~~g~~~~~~~~~ma~~Ae~~a~~~Gitre~ld~  289 (441)
                      .|+.+|++|++|++|++|+|+|++.|+...  .+..++. ....+      ++ +....|+..+++||++||+|||+||+
T Consensus        98 ~A~~~I~sG~~dvvla~G~E~mS~~p~~~~--~~~~~~~-~~~~~------~~-~~~~~m~~~ae~~~~~ygisre~~d~  167 (387)
T PRK07850         98 LVAGLIAAGAIDVGIACGVEAMSRVPLGAN--AGPGRGL-PRPDS------WD-IDMPNQFEAAERIAKRRGITREDVDA  167 (387)
T ss_pred             HHHHHHHCCCCCEEEEEeEecCCCCccccc--ccccccC-ccccc------cc-cCcchHHHHHHHHHHHhCCCHHHHHH
Confidence            689999999999999999999999985221  1111111 00001      01 11235678999999999999999999


Q ss_pred             HHHHHHHHHHhhhhCCCCCccccceeeec--CC----Cc-eeEeccCCCCCCCCHHHHhcCCCccccCCccccCCCCCCC
Q psy4157         290 YAYQSQVKTAKAQEGGYFDEEIVPVVIST--RK----GD-VVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGIN  362 (441)
Q Consensus       290 ~A~~S~~~A~~A~~~g~f~~ei~Pv~v~~--~~----g~-~~~~~D~~~r~~~t~e~l~~~~~v~~p~G~lt~~n~~~~s  362 (441)
                      ||++||+||.+|+++|+|++||+|++++.  ++    +. ..++.|+.+| ++|+|+|++++|+| ++|++|++|||+++
T Consensus       168 ~a~~sh~~a~~A~~~g~f~~ei~pv~~~~~~~~~np~~~~~~~~~D~~~r-~~t~e~l~~l~p~~-~~~~~t~~~~~~~s  245 (387)
T PRK07850        168 FGLRSQRRAAQAWAEGRFDREISPVQAPVLDEEGQPTGETRLVTRDQGLR-DTTMEGLAGLKPVL-EGGIHTAGTSSQIS  245 (387)
T ss_pred             HHHHHHHHHHHHHHcCCCcceeeeEeecccccccccCCCceEeecCCCcc-cCCHHHhccCCCCC-CCCCccchhcCCcC
Confidence            99999999999999999999999998763  11    22 4689999999 99999999999998 56788999999999


Q ss_pred             CCcEEEEEcCHHHHHhcCCCceEEEEEEEeecCCCCcCCCChHHHHHHHHHHcCCCCCCccEEEecCCChhhhhhhhc
Q psy4157         363 DGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATSGGIANRRQE  440 (441)
Q Consensus       363 DGAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~~p~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~~~~~~~  440 (441)
                      |||||+||+|+++|++++++|.++|++++..+.+|..+..+++.|++++|+++||+++|||++||||||+++.+.++|
T Consensus       246 DGAaa~vl~see~A~~l~~~p~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~did~~ei~d~F~~~~l~~~e  323 (387)
T PRK07850        246 DGAAAVLWMDEDRARALGLRPRARIVAQALVGAEPYYHLDGPVQATAKVLEKAGMKIGDIDLVEINEAFASVVLSWAQ  323 (387)
T ss_pred             CceEEEEEecHHHHHHcCCCCcEEEEEEEEeccCchhhcchHHHHHHHHHHHcCCCHHHcCeeeecccchHHHHHHHH
Confidence            999999999999999999999999999999888888888899999999999999999999999999999999999887

>PRK05656 acetyl-CoA acetyltransferase; Provisional

Probab=100.00  E-value=4.2e-40  Score=339.30  Aligned_cols=230  Identities=49%  Similarity=0.732  Sum_probs=195.8

Q ss_pred             hhhHHhhhcCeeEEEEeecccCCCCccchh-cccccccCcccccchhhh-cccccccccchHHHHHHHHHHHhCCCHHHH
Q psy4157         210 LARIAIKSGDATAIVAGGQECMSQAPHVIN-IRNGIKLNDAEMKDSMVF-DGLTDAFHNIHMGITAENIAKKWSISRLEQ  287 (441)
Q Consensus       210 ~A~~~I~sG~advvla~G~E~ms~~P~~~~-~r~g~~~g~~~~~~d~~~-~g~~~~~~~~~ma~~Ae~~a~~~Gitre~l  287 (441)
                      .|+.+|.+|.+|++|++|+|+|+..|+... .|.+..++. ....+... +++++.+.+..|++.+++||++||+|||++
T Consensus        97 ~A~~~I~sG~~d~vLv~G~E~ms~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~a~~a~~~~~~~gitre~~  175 (393)
T PRK05656         97 LAAQAIRCGDAEVIIAGGQENMSLAPYVLPGARTGLRMGH-AQLVDSMITDGLWDAFNDYHMGITAENLVEKYGISREAQ  175 (393)
T ss_pred             HHHHHHHcCCCCEEEEEEEhhhccCccccccccccccccc-hhhhhhhccccccccccCCCHHHHHHHHHHHhCCCHHHH
Confidence            689999999999999999999999996321 121212211 11111110 122332233579999999999999999999


Q ss_pred             HHHHHHHHHHHHhhhhCCCCCccccceeeecCCCc-eeEeccCCCCCCCCHHHHhcCCCccccCCccccCCCCCCCCCcE
Q psy4157         288 DEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGD-VVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAA  366 (441)
Q Consensus       288 d~~A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~g~-~~~~~D~~~r~~~t~e~l~~~~~v~~p~G~lt~~n~~~~sDGAA  366 (441)
                      |+||++||+||.+|++.++|++||+|+++.+..++ +.++.|+++|+++|+|.|.+++|+|.|+|+||++|||+++|||+
T Consensus       176 d~~Av~sh~~a~~a~~~a~~~~ei~pv~~~~~~~~~~~~~~D~~~r~~~~~e~l~~l~p~~~~~g~lt~~~~s~~~DGAa  255 (393)
T PRK05656        176 DAFAAASQQKAVAAIEAGRFDDEITPILIPQRKGEPLAFATDEQPRAGTTAESLAKLKPAFKKDGSVTAGNASSLNDGAA  255 (393)
T ss_pred             HHHHHHHHHHHHHHHHcCCCcceeeeEEeccCCCCceEeccCCCCCCCCCHHHHhcCCCCcCCCCCEEccccCCCCCceE
Confidence            99999999999998999999999999988765554 66789999999999999999999998889999999999999999


Q ss_pred             EEEEcCHHHHHhcCCCceEEEEEEEeecCCCCcCCCChHHHHHHHHHHcCCCCCCccEEEecCCChhhhhhhhc
Q psy4157         367 AVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATSGGIANRRQE  440 (441)
Q Consensus       367 AvVLaSe~~A~~lg~~p~a~I~~~~~~~~~p~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~~~~~~~  440 (441)
                      |+||+|++.|++++.+|+++|++++..+.+|..+..++..|++++|+++||+++|||++|+||+|++..+.++|
T Consensus       256 a~vl~s~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~~e~~d~f~~~~~~~~e  329 (393)
T PRK05656        256 AVLLMSAAKAKALGLPVLAKIAAYANAGVDPAIMGIGPVSATRRCLDKAGWSLAELDLIEANEAFAAQSLAVGK  329 (393)
T ss_pred             EEEEecHHHHHHCCCCeeEEEEEEEEecCCCcccchhHHHHHHHHHHHcCCCHHHCCEEEecCccHHHHHHHHH
Confidence            99999999999999999999999999888888888899999999999999999999999999999999888776

>PRK06445 acetyl-CoA acetyltransferase; Provisional

Probab=100.00  E-value=4.8e-40  Score=339.08  Aligned_cols=227  Identities=33%  Similarity=0.518  Sum_probs=192.0

Q ss_pred             chhhHHhhhcCeeEEEEeecccCCCCccchhcccccccCcccccchhhhcccccccccchHHHHHHHHHHHhCCCHHHHH
Q psy4157         209 PLARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQD  288 (441)
Q Consensus       209 ~~A~~~I~sG~advvla~G~E~ms~~P~~~~~r~g~~~g~~~~~~d~~~~g~~~~~~~~~ma~~Ae~~a~~~Gitre~ld  288 (441)
                      ..|+.+|++|.+|++|++|+|+|++.|...........   ....++.+.. ++.+....|++.|++||++||+|||++|
T Consensus       103 ~~A~~~I~sG~~d~vLv~G~e~ms~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~a~~a~~~~~~ygitre~~a  178 (394)
T PRK06445        103 SIGAMEIATGMADIVIAGGVEHMTRTPMGDNPHIEPNP---KLLTDPKYIE-YDLTTGYVMGLTAEKLAEEAGIKREEMD  178 (394)
T ss_pred             HHHHHHHHcCCCCEEEEeeecccccCccccCccccCCh---hhccccccCc-ccccCCCCHHHHHHHHHHHhCCCHHHHH
Confidence            37899999999999999999999988752100000000   0000111101 1111223599999999999999999999


Q ss_pred             HHHHHHHHHHHhhhhCCCCCccccceeeecCCCc-eeEeccCCCCCCCCHHHHhcCCCccccCCccccCCCCCCCCCcEE
Q psy4157         289 EYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGD-VVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAA  367 (441)
Q Consensus       289 ~~A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~g~-~~~~~D~~~r~~~t~e~l~~~~~v~~p~G~lt~~n~~~~sDGAAA  367 (441)
                      +||++||+||.+|+++|+|++||+|+.+. ++|. ..+++|+++|+++|+|+|++++|+++|+|+||++|||+++|||+|
T Consensus       179 ~va~~sh~~A~~a~~~g~~~~ei~p~~~~-~~~~~~~~npda~~r~~~t~e~~~~~~~v~~~~g~lt~~~~~~~~DGAaa  257 (394)
T PRK06445        179 RWSLRSHQLAAKAIQEGYFKDEILPIEVE-VEGKKKVVDVDQSVRPDTSLEKLAKLPPAFKPDGVITAGNSSPLNSGASY  257 (394)
T ss_pred             HHHHHHHHHHHHHHHcCCCcceEeEEEec-CCCCceeeCCCCCCCCCCCHHHHhcCCCccCCCCcEecCcCCCCCCceEE
Confidence            99999999999999999999999999884 4444 567999999999999999999999998899999999999999999


Q ss_pred             EEEcCHHHHHhcCCCceEEEEEEEeecCCCCcCCCChHHHHHHHHHHcCCCCCCccEEEecCCChhhhhhhhc
Q psy4157         368 VLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATSGGIANRRQE  440 (441)
Q Consensus       368 vVLaSe~~A~~lg~~p~a~I~~~~~~~~~p~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~~~~~~~  440 (441)
                      |||+|++.|++++.+|+++|++++....+|..+..++..|++++|+++||+++|||++|+||+|+++...++|
T Consensus       258 vvl~s~~~A~~~~~~~~a~i~g~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~dId~~e~~d~f~~~~l~~~e  330 (394)
T PRK06445        258 VLLMSKKAVKKYGLKPMAKIRSFGFAGVPPAIMGKGPVPASKKALEKAGLSVKDIDLWEINEAFAVVVLYAIK  330 (394)
T ss_pred             EEEecHHHHHHCCCCceEEEEEEEEeccCCchhcchHHHHHHHHHHHcCCCHHHcCEEEecccchHHHHHHHH
Confidence            9999999999999999999999999988887777889999999999999999999999999999999999987

>PRK06954 acetyl-CoA acetyltransferase; Provisional

Probab=100.00  E-value=3.1e-40  Score=340.62  Aligned_cols=229  Identities=35%  Similarity=0.576  Sum_probs=194.3

Q ss_pred             hhhHHhhhcCeeEEEEeecccCCCCccchh-cccccccCcccccchhhh-ccccccc-ccchHHHHHHHHHHHhCCCHHH
Q psy4157         210 LARIAIKSGDATAIVAGGQECMSQAPHVIN-IRNGIKLNDAEMKDSMVF-DGLTDAF-HNIHMGITAENIAKKWSISRLE  286 (441)
Q Consensus       210 ~A~~~I~sG~advvla~G~E~ms~~P~~~~-~r~g~~~g~~~~~~d~~~-~g~~~~~-~~~~ma~~Ae~~a~~~Gitre~  286 (441)
                      .|+.+|++|.+|++|++|+|+|+..|+..+ .|.+..++. ....+.+. .++.+.+ .+..|++.+++||++||+|||+
T Consensus       102 ~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ygitre~  180 (397)
T PRK06954        102 FAHDMLVAGSVDVIVAGGMESMTNAPYLLPKARGGMRMGH-GQVLDHMFLDGLEDAYDKGRLMGTFAEECAGEYGFTREA  180 (397)
T ss_pred             HHHHHHHCCCCCEEEEEeeeccCCCcccCcccccccccCc-chhhhhhcccccccccccCCCHHHHHHHHHHHhCCCHHH
Confidence            689999999999999999999998886322 122211221 01111111 1211222 2457999999999999999999


Q ss_pred             HHHHHHHHHHHHHhhhhCCCCCccccceeeecCCCceeEeccCCCCCCCCHHHHhcCCCccccCCccccCCCCCCCCCcE
Q psy4157         287 QDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAA  366 (441)
Q Consensus       287 ld~~A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~g~~~~~~D~~~r~~~t~e~l~~~~~v~~p~G~lt~~n~~~~sDGAA  366 (441)
                      +|+||++||+||.++|+.++|+++++|+++.+..++..++.|+++| .++.|.+.+++|+|+|+|+||++|||+++||||
T Consensus       181 ~d~~A~~s~~~a~~a~~~~~~~~~~~pv~v~~~~~~~~v~~D~~pr-~~~~~~l~~l~~~f~~~g~lt~~~~~~~~DGAa  259 (397)
T PRK06954        181 QDAFAIESLARAKRANEDGSFAWEIAPVTVAGKKGDTVIDRDEQPF-KANPEKIPTLKPAFSKTGTVTAANSSSISDGAA  259 (397)
T ss_pred             HHHHHHHHHHHHHHHHHcCCCCceEeeEEeccCCCCeEeccCCCcC-CCCHHHHhCCCCccCCCCcEEccccCCCCCceE
Confidence            9999999999999889999999999999888766667799999999 599999999999999999999999999999999


Q ss_pred             EEEEcCHHHHHhcCCCceEEEEEEEeecCCCCcCCCChHHHHHHHHHHcCCCCCCccEEEecCCChhhhhhhhc
Q psy4157         367 AVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATSGGIANRRQE  440 (441)
Q Consensus       367 AvVLaSe~~A~~lg~~p~a~I~~~~~~~~~p~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~~~~~~~  440 (441)
                      |+||+|+++|++++++|+++|+++++.+.+|..+..++..|++++|+++||+++|||+|||||+|++..+.++|
T Consensus       260 a~vl~s~~~a~~~~~~p~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~Did~~ei~d~fa~~~l~~~e  333 (397)
T PRK06954        260 ALVMMRASTAKRLGLAPLARVVGHSTFAQAPSKFTTAPVGAIRKLFEKNGWRAAEVDLFEINEAFAVVTMAAMK  333 (397)
T ss_pred             EEEEecHHHHHHCCCCceEEEEEEEecccCcccccchHHHHHHHHHHHcCCCHHHCCEEehhhHHHHHHHHHHH
Confidence            99999999999999999999999998877787777889999999999999999999999999999999998876

>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed

Probab=100.00  E-value=5e-40  Score=342.06  Aligned_cols=230  Identities=29%  Similarity=0.356  Sum_probs=189.1

Q ss_pred             chhhHHhhhcCeeEEEEeecccCCCCccchhc---cc-cc-----ccCcc------cccchhhh--cccccccccchHHH
Q psy4157         209 PLARIAIKSGDATAIVAGGQECMSQAPHVINI---RN-GI-----KLNDA------EMKDSMVF--DGLTDAFHNIHMGI  271 (441)
Q Consensus       209 ~~A~~~I~sG~advvla~G~E~ms~~P~~~~~---r~-g~-----~~g~~------~~~~d~~~--~g~~~~~~~~~ma~  271 (441)
                      ..|+++|++|++|++||+|+|+|++.|+....   +. ..     .++..      ....+.+.  +++.+......|++
T Consensus        99 ~~Aa~~I~sG~~dvvLvgG~Esms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~  178 (428)
T PRK08963         99 ANVAESIMAGTIDIGIAGGADSSSVLPIGVSKKLARALVDLNKARTLGQRLKLFSRLRLRDLLPVPPAVAEYSTGLRMGD  178 (428)
T ss_pred             HHHHHHHHCCCCCEEEEecccccCCCccccccccccchhccccccccCcccccccccchhhccccCcccccccCCCCHHH
Confidence            36899999999999999999999999853210   10 00     00000      00000000  11222112346999


Q ss_pred             HHHHHHHHhCCCHHHHHHHHHHHHHHHHhhhhCCCCCccccceeeecCCCceeEeccCCCCCCCCHHHHhcCCCcccc-C
Q psy4157         272 TAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQK-D  350 (441)
Q Consensus       272 ~Ae~~a~~~Gitre~ld~~A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~g~~~~~~D~~~r~~~t~e~l~~~~~v~~p-~  350 (441)
                      .|++||++||+|||++|+||++||+||.+|++.|+|++||+|+.++++.  ..++.|+++|+++|+|+|++++++++| +
T Consensus       179 ~A~~~~~~ygisre~~~~~avksh~~a~~~~~~g~~~~ei~p~~~~p~a--~~~~~D~~~r~~~t~e~~~~~~~v~~p~~  256 (428)
T PRK08963        179 TAEQMAKTYGISREEQDALAHRSHQLAAQAWAEGKLDDEVMTAHVPPYK--QPLEEDNNIRGDSTLEDYAKLRPAFDRKH  256 (428)
T ss_pred             HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccceeeEEecCCc--eeeCCCCCCCCCCCHHHHhcCCccccCCC
Confidence            9999999999999999999999999999999999999999999886543  358999999999999999999999985 5


Q ss_pred             CccccCCCCCCCCCcEEEEEcCHHHHHhcCCCceEEEEEEEeecCCCC-cCCCChHHHHHHHHHHcCCCCCCccEEEecC
Q psy4157         351 GTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPT-LMGTGPIPAVNAVLAKAGWSKEEVGYFNRVA  429 (441)
Q Consensus       351 G~lt~~n~~~~sDGAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~~p~-~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D  429 (441)
                      |+||++|||+++|||+|+||+|+++|++++.+|+++|.+++..+.+|. .++.++..|++++|+++||+++|||++||||
T Consensus       257 g~lt~~~~~~~~DGAaA~vl~see~A~~l~~~p~~~i~g~~~~~~~~~~~~~~~~~~a~~~al~~AGl~~~DiD~~Ei~d  336 (428)
T PRK08963        257 GTVTAANSTPLTDGAAAVLLMSESRAKALGLTPLGYLRSYAFAAIDVWQDMLLGPAYATPLALERAGLTLADLTLIDMHE  336 (428)
T ss_pred             CceehhhcCCCCCceEEEEEecHHHHHHcCCCccEEEEEEecccCCchhhhhhHHHHHHHHHHHHcCCCHHHCCEEEEcc
Confidence            899999999999999999999999999999999999999998876663 3566788999999999999999999999999


Q ss_pred             CChhhhhhhhc
Q psy4157         430 TSGGIANRRQE  440 (441)
Q Consensus       430 ~Ft~~~~~~~~  440 (441)
                      ||++++..++|
T Consensus       337 ~Fa~~~l~~~e  347 (428)
T PRK08963        337 AFAAQTLANLQ  347 (428)
T ss_pred             ccHHHHHHHHH
Confidence            99999988876

>KOG1391|consensus

Probab=100.00  E-value=1.3e-40  Score=312.46  Aligned_cols=175  Identities=46%  Similarity=0.701  Sum_probs=146.1

Q ss_pred             CCCCCccc-ccccCcCCCccccccccccCCcccccCCCchHhhHHHHHHHhCCCHHHHhHHHHhcHHHHHHHHhCCCCCc
Q psy4157           1 MSQAPHVI-NIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDE   79 (441)
Q Consensus         1 mS~~P~~~-~~r~g~~~g~~~~~d~~~~~~l~d~~~~~~mg~~ae~~a~~~~isRe~~D~~a~~s~~ra~~a~~~g~~~~   79 (441)
                      ||++||.. +.|+|..+|..+-.+.++|++|+|+|...+|+.||||++.+|.||||++|+||++||+||.+||++|+|.+
T Consensus       121 MSq~Pf~vRnvRFGT~LG~~y~lED~LW~sLtD~y~kLpMa~TAEnL~~qyKisRee~DefaL~SQ~~Wkkaq~aG~fn~  200 (396)
T KOG1391|consen  121 MSQAPFCVRNVRFGTKLGSDYKLEDSLWVSLTDQYVKLPMAMTAENLAVQYKISREECDEFALQSQQRWKKAQDAGYFND  200 (396)
T ss_pred             cccCcceeeeeeeccccccccchhhhHhhhccchhhhcchhhhHHHhhhhheecHHHhhHHHhhhHHHHHhhhhcCcccc
Confidence            99999965 79999999998888889999999999999999999999999999999999999999999999999999999


Q ss_pred             ceeeeEeccCCCceeeeccCCCCCCccHHHhhhcCcccccCCceecCCCCCCCCccccchhhhhcccCceeeecccCCCC
Q psy4157          80 EIVPVVISTRKGDVVVAKDEYPKANTSVDALQKLRPVFQKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEYPKA  159 (441)
Q Consensus        80 ei~p~~~~~~~g~~~~~~de~~~~~~~~~~l~~l~p~f~~~g~~t~~~~~~~~dg~~~~~~~~~~~~~~~~~~~d~~~~~  159 (441)
                      ||+|++++.+||+..+..||||||.||+|+|+||+|+|+|+                                       
T Consensus       201 Ei~pI~~K~kkge~~f~vDEHpRp~TT~E~L~KLppvFkKd---------------------------------------  241 (396)
T KOG1391|consen  201 EIAPIEVKTKKGEQTFQVDEHPRPQTTLEQLQKLPPVFKKD---------------------------------------  241 (396)
T ss_pred             cccceEEeeccCceeeEecCCCCccchHHHHhhCCchhccC---------------------------------------
Confidence            99999999988887777777777766666666655555544                                       


Q ss_pred             CCCHHHHhcCCCccCCCCcccCCCCCCccccchhhhhhhHHHHHhccCcchhhHHhhhcCeeEEEEeecccCCCCcc
Q psy4157         160 NTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQARNIQPLARIAIKSGDATAIVAGGQECMSQAPH  236 (441)
Q Consensus       160 ~~~~~~~~~l~p~~~~~g~vtagn~s~~~Dgaa~~ll~s~~~a~~~gl~~~A~~~I~sG~advvla~G~E~ms~~P~  236 (441)
                                       |+||+||+|+++|||+++++++++..+++++.|+|+.  .   +=.++.+.++-|+-+|.
T Consensus       242 -----------------G~VtAGnASGi~DGA~AvivAsEdavK~~NlkPLARi--V---ays~vGcdP~IMGIGPv  296 (396)
T KOG1391|consen  242 -----------------GTVTAGNASGIADGAGAVIVASEDAVKKHNLKPLARI--V---AYSVVGCDPSIMGIGPV  296 (396)
T ss_pred             -----------------CeeeccccccccCCceeEEEechhHHhhcCCchhhhh--h---eeeeeccChhhccccCc
Confidence                             4577777788888888888888888888899888874  1   11222345777777775

>PRK09052 acetyl-CoA acetyltransferase; Provisional

Probab=100.00  E-value=1.7e-39  Score=334.92  Aligned_cols=222  Identities=37%  Similarity=0.587  Sum_probs=190.6

Q ss_pred             hhhHHhhhcCeeEEEEeecccCCCCccchhcccccccCcccccchhhhcccccccccchHHHHHHHHHHHhCCCHHHHHH
Q psy4157         210 LARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDE  289 (441)
Q Consensus       210 ~A~~~I~sG~advvla~G~E~ms~~P~~~~~r~g~~~g~~~~~~d~~~~g~~~~~~~~~ma~~Ae~~a~~~Gitre~ld~  289 (441)
                      +|+.+|++|++|+||++|+|+|+..|.... ...  +.  ....+.. .++.+   ...|++.|++|+++||+|||++|+
T Consensus       104 ~A~~~I~sG~~d~vLv~G~E~mS~~p~~~~-~~~--~~--~~~~~~~-~~~~~---~~~~~~~a~~~~~~ygitre~~d~  174 (399)
T PRK09052        104 MAADRIRVGEADVMIAAGVESMSMVPMMGN-KPS--MS--PAIFARD-ENVGI---AYGMGLTAEKVAEQWKVSREDQDA  174 (399)
T ss_pred             HHHHHHHCCCCCEEEEEEEeccccCcccCc-ccc--cC--cchhccC-Ccccc---cchHHHHHHHHHHHhCCCHHHHHH
Confidence            689999999999999999999999984211 000  00  0011100 01111   247999999999999999999999


Q ss_pred             HHHHHHHHHHhhhhCCCCCccccceeeecC-----CC-----ceeEeccCCCCCCCCHHHHhcCCCccccCCccccCCCC
Q psy4157         290 YAYQSQVKTAKAQEGGYFDEEIVPVVISTR-----KG-----DVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNAS  359 (441)
Q Consensus       290 ~A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~-----~g-----~~~~~~D~~~r~~~t~e~l~~~~~v~~p~G~lt~~n~~  359 (441)
                      ||++||+||.+|+..|+|++||+|+++...     +|     ...+..|+++|+++|+|.|.+++|+|.|+|+||++|||
T Consensus       175 ~a~~sh~~a~~n~~ag~~~~ei~~~~v~~~~~~~~~~~~~~~~~~~~~D~~~r~~~~~e~l~~l~p~f~~~g~lt~~n~s  254 (399)
T PRK09052        175 FALESHQKAIAAQQAGEFKDEITPYEITERFPDLATGEVDVKTRTVDLDEGPRADTSLEGLAKLKPVFANKGSVTAGNSS  254 (399)
T ss_pred             HHHHHHHHHHHHHHcCCCCceEeeEeccccccccccCcccccceEeccCCCCCCCCCHHHHhcCCCccCCCCcEECCccC
Confidence            999999999999988999999999987643     23     25688999999999999999999999988999999999


Q ss_pred             CCCCCcEEEEEcCHHHHHhcCCCceEEEEEEEeecCCCCcCCCChHHHHHHHHHHcCCCCCCccEEEecCCChhhhhhhh
Q psy4157         360 GINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATSGGIANRRQ  439 (441)
Q Consensus       360 ~~sDGAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~~p~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~~~~~~  439 (441)
                      +++|||+|+||+|++.|++++++|+++|++++..+.+|..+..+++.|+++||++|||+++|||++||||+|++.+..++
T Consensus       255 ~~~DGAaa~vl~se~~a~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~A~~~al~~Agi~~~did~~ei~D~f~~~~l~~~  334 (399)
T PRK09052        255 QTSDGAGAVILVSEKALKQFNLTPLARFVSFAVAGVPPEIMGIGPIEAIPAALKQAGLKQDDLDWIELNEAFAAQSLAVI  334 (399)
T ss_pred             CCCCceEEEEEecHHHHHHCCCCeeEEEEEEEEeccCCCccchhHHHHHHHHHHHcCCCHHHcCEEEeCcHHHHHHHHHH
Confidence            99999999999999999999999999999999999999888889999999999999999999999999999999998877


Q ss_pred             c
Q psy4157         440 E  440 (441)
Q Consensus       440 ~  440 (441)
                      |
T Consensus       335 e  335 (399)
T PRK09052        335 R  335 (399)
T ss_pred             H
Confidence            6

>PRK07661 acetyl-CoA acetyltransferase; Provisional

Probab=100.00  E-value=2.2e-39  Score=333.46  Aligned_cols=220  Identities=38%  Similarity=0.538  Sum_probs=190.2

Q ss_pred             hhhHHhhhcCeeEEEEeecccCCCCccchhcccccccCcccccchhhhcccccccccchHHHHHHHHHHHhCCCHHHHHH
Q psy4157         210 LARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDE  289 (441)
Q Consensus       210 ~A~~~I~sG~advvla~G~E~ms~~P~~~~~r~g~~~g~~~~~~d~~~~g~~~~~~~~~ma~~Ae~~a~~~Gitre~ld~  289 (441)
                      .|+.+|++|.+|++||+|+|+|+..|+... ..+  ..  ....+    .  .+.....|++.+++|+++||+|||++|+
T Consensus        99 ~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~-~~~--~~--~~~~~----~--~~~~~~~m~~~a~~~~~~~g~tre~~a~  167 (391)
T PRK07661         99 YGAERIMLGHSEAVIAGGAESMSLVPMMGH-VVR--PN--PRLVE----A--APEYYMGMGHTAEQVAVKYGISREDQDA  167 (391)
T ss_pred             HHHHHHHcCCCCEEEEEEEeecccCCcccc-ccC--CC--ccccc----c--ccchhhhHHHHHHHHHHHhCCCHHHHHH
Confidence            689999999999999999999999885211 000  00  00000    0  1111235899999999999999999999


Q ss_pred             HHHHHHHHHHhhhhCCCCCccccceeeecC----CC-----ceeEeccCCCCCCCCHHHHhcCCCccccCCccccCCCCC
Q psy4157         290 YAYQSQVKTAKAQEGGYFDEEIVPVVISTR----KG-----DVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASG  360 (441)
Q Consensus       290 ~A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~----~g-----~~~~~~D~~~r~~~t~e~l~~~~~v~~p~G~lt~~n~~~  360 (441)
                      ||++||+||.+|++.|+|++||+|+.++.+    +|     .++++.|+++|+++|+|.+.+++|+|++.|+||++|||+
T Consensus       168 ~av~s~~~a~~n~~ag~~~~ei~pi~~~~~~~~~~~~~~~~~~~~~~d~~~rp~~~~e~l~~l~p~f~~~g~lt~~~~~~  247 (391)
T PRK07661        168 FAVRSHQRAAKALAEGKFADEIVPVDVTLRTVGENNKLQEETITFSQDEGVRADTTLEILGKLRPAFNVKGSVTAGNSSQ  247 (391)
T ss_pred             HHHHHHHHHHHHHHcCCCccceeeeecccccccccCcccccceeEecCCCCCCCCCHHHHhcCCCCcCCCCCEeccccCC
Confidence            999999999999999999999999988753    22     367899999999999999999999998789999999999


Q ss_pred             CCCCcEEEEEcCHHHHHhcCCCceEEEEEEEeecCCCCcCCCChHHHHHHHHHHcCCCCCCccEEEecCCChhhhhhhhc
Q psy4157         361 INDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATSGGIANRRQE  440 (441)
Q Consensus       361 ~sDGAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~~p~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~~~~~~~  440 (441)
                      ++||||||||+|++.|++++.+|+++|++++..+.+|..+..++..|++++|+++||+++|||+||+||+|++.+..++|
T Consensus       248 ~~DGAaavvl~s~~~A~~~g~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~did~~ei~d~f~~~~l~~~e  327 (391)
T PRK07661        248 MSDGAAAVLLMDREKAESDGLKPLAKFRSFAVAGVPPEVMGIGPIAAIPKALKLAGLELSDIGLFELNEAFASQSIQVIR  327 (391)
T ss_pred             CCCceEEEEEecHHHHHHCCCCceEEEEEEEEecCCCcccchHHHHHHHHHHHHcCCCHHHCCEEEeCCHHHHHHHHHHH
Confidence            99999999999999999999999999999999998888887888999999999999999999999999999999999876

>PRK05790 putative acyltransferase; Provisional

Probab=100.00  E-value=5.9e-39  Score=330.98  Aligned_cols=230  Identities=54%  Similarity=0.802  Sum_probs=194.0

Q ss_pred             hhhHHhhhcCeeEEEEeecccCCCCccchh-cccccccCcccccchh-hhcccccccccchHHHHHHHHHHHhCCCHHHH
Q psy4157         210 LARIAIKSGDATAIVAGGQECMSQAPHVIN-IRNGIKLNDAEMKDSM-VFDGLTDAFHNIHMGITAENIAKKWSISRLEQ  287 (441)
Q Consensus       210 ~A~~~I~sG~advvla~G~E~ms~~P~~~~-~r~g~~~g~~~~~~d~-~~~g~~~~~~~~~ma~~Ae~~a~~~Gitre~l  287 (441)
                      .|+.+|++|.+|+||++|+|+|+..|.... .+.+..++. ....+. .+.+.++++.+..|++.+++||++||+|||++
T Consensus        97 ~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~a~~a~~y~~~yG~tre~l  175 (393)
T PRK05790         97 LAAQAIRAGDADIVVAGGQESMSQAPHVLPGSRWGQKMGD-VELVDTMIHDGLTDAFNGYHMGITAENLAEQYGITREEQ  175 (393)
T ss_pred             HHHHHHHcCCCCEEEEEeeeccccCcccccccccccccCc-chhhhhhcccccccccCCCCHHHHHHHHHHHhCCCHHHH
Confidence            689999999999999999999998875311 111111111 001111 01112222234579999999999999999999


Q ss_pred             HHHHHHHHHHHHhhhhCCCCCccccceeeecCCCc-eeEeccCCCCCCCCHHHHhcCCCccccCCccccCCCCCCCCCcE
Q psy4157         288 DEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGD-VVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAA  366 (441)
Q Consensus       288 d~~A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~g~-~~~~~D~~~r~~~t~e~l~~~~~v~~p~G~lt~~n~~~~sDGAA  366 (441)
                      ++||++||+||.+|+++|+|+++|+|+.+..++++ ++++.|+++|.+++.|.+.+++|+++|+|+||++|||+++|||+
T Consensus       176 a~vav~~~~~A~~~~~~g~~~~~i~P~~~~~~~~~~~~~~~d~~~~~~~~~e~l~~~~~v~~~~g~lt~~d~~~~~DGAa  255 (393)
T PRK05790        176 DEFALASQQKAEAAIKAGRFKDEIVPVTIKQRKGDPVVVDTDEHPRPDTTAESLAKLRPAFDKDGTVTAGNASGINDGAA  255 (393)
T ss_pred             HHHHHHHHHHHHHHHHcCCCcceEeeEEecCCCCCceEecCCCCCCCCCCHHHHhCCCCccCCCCCEeCCcCCCCCCceE
Confidence            99999999999998899999999999988765444 66799999999999999999999999989999999999999999


Q ss_pred             EEEEcCHHHHHhcCCCceEEEEEEEeecCCCCcCCCChHHHHHHHHHHcCCCCCCccEEEecCCChhhhhhhhc
Q psy4157         367 AVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATSGGIANRRQE  440 (441)
Q Consensus       367 AvVLaSe~~A~~lg~~p~a~I~~~~~~~~~p~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~~~~~~~  440 (441)
                      |+||+|+++|++++.+|+++|++++..+.+|..+..+++.|++++|++||++++|||++||||+|++.++.++|
T Consensus       256 avvl~s~e~a~~~~~~~~~~I~g~~~~~~~~~~~~~~~~~a~~~a~~~Agi~~~did~~e~~d~f~~~~l~~~e  329 (393)
T PRK05790        256 AVVVMSEAKAKELGLTPLARIVSYAVAGVDPAIMGIGPVPAIRKALEKAGWSLADLDLIEINEAFAAQALAVEK  329 (393)
T ss_pred             EEEEecHHHHHHCCCCeeEEEEEEEEccCCCCccchhHHHHHHHHHHHcCCCHHHCCEEEeCcHHHHHHHHHHH
Confidence            99999999999999999889999999888777766788899999999999999999999999999999999887

>PRK08170 acetyl-CoA acetyltransferase; Provisional

Probab=100.00  E-value=4.7e-39  Score=334.65  Aligned_cols=227  Identities=34%  Similarity=0.504  Sum_probs=186.6

Q ss_pred             chhhHHhhhcCeeEEEEeecccCCCCccchhc---cc----------ccccCccccc-chhhh------cccccccccch
Q psy4157         209 PLARIAIKSGDATAIVAGGQECMSQAPHVINI---RN----------GIKLNDAEMK-DSMVF------DGLTDAFHNIH  268 (441)
Q Consensus       209 ~~A~~~I~sG~advvla~G~E~ms~~P~~~~~---r~----------g~~~g~~~~~-~d~~~------~g~~~~~~~~~  268 (441)
                      .+|+.+|.+|.+|++|++|+|+|+..|.....   ++          +.+++....+ .+...      .++.+++.+..
T Consensus        97 ~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  176 (426)
T PRK08170         97 DSAAANIALGRADLVLAGGVEAMSHAPLLFSEKMVRWLAGWYAAKSIGQKLAALGKLRPSYLAPVIGLLRGLTDPVVGLN  176 (426)
T ss_pred             HHHHHHHHCCCCCEEEEEEEecccCCccccccccccchhccccccccCccccccccccccccccccccCccccccccCcC
Confidence            36899999999999999999999988752210   00          0001000000 00000      12233333357


Q ss_pred             HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhhhhCCCCCccccceeeecCCCceeEeccCCCCCCCCHHHHhcCCCccc
Q psy4157         269 MGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQ  348 (441)
Q Consensus       269 ma~~Ae~~a~~~Gitre~ld~~A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~g~~~~~~D~~~r~~~t~e~l~~~~~v~~  348 (441)
                      |++.+++||++||+|||+||+||++||+||.+|+++|.|+ ||+|++  .++|+ .+.+|+++|+++|+|+|++++|+++
T Consensus       177 ~a~~a~~~~~~ygitre~~a~vav~s~~~a~~A~~~g~~~-~i~pv~--~~~~n-p~a~de~~r~~~t~e~~~~~~~v~~  252 (426)
T PRK08170        177 MGQTAEVLAHRFGITREQMDAYAARSHQRLAAAQAEGRLK-EVVPLF--DRDGK-FYDHDDGVRPDSSMEKLAKLKPFFD  252 (426)
T ss_pred             HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcc-eEeeee--cCCCC-eeccCCCCCCCCCHHHHhcCCCccc
Confidence            9999999999999999999999999999999999999998 999997  23333 4788999999999999999999998


Q ss_pred             -cCCccccCCCCCCCCCcEEEEEcCHHHHHhcCCCceEEEEEEEeecCCCCcCCCChHHHHHHHHHHcCCCCCCccEEEe
Q psy4157         349 -KDGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYFNR  427 (441)
Q Consensus       349 -p~G~lt~~n~~~~sDGAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~~p~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei  427 (441)
                       |.|+||++|||+++|||+|+||+|+++|++++.+|+++|+++...+.+|..+..+++.|++++|+++||+++|||++||
T Consensus       253 ~p~~~lt~~~~s~~~DGAaA~vl~s~e~A~~~~~~p~~~i~~~~~~~~~~~~~~~~~~~a~~~al~~aGl~~~did~~ei  332 (426)
T PRK08170        253 RPYGRVTAGNSSQITDGACWLLLASEEAVKKYGLPPLGRIVDSQWAALDPSQMGLGPVHAATPLLQRHGLTLEDLDLWEI  332 (426)
T ss_pred             CCCCCEeccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEeeEeeeCchhhcccHHHHHHHHHHHcCCCHHHcCEEEe
Confidence             6689999999999999999999999999999999999999999988888888788999999999999999999999999


Q ss_pred             cCCChhhhhhhh
Q psy4157         428 VATSGGIANRRQ  439 (441)
Q Consensus       428 ~D~Ft~~~~~~~  439 (441)
                      ||+|++.++.++
T Consensus       333 ~daFa~~~l~~l  344 (426)
T PRK08170        333 NEAFAAQVLACL  344 (426)
T ss_pred             cchhHHHHHHHH
Confidence            999999988443

>PRK09268 acetyl-CoA acetyltransferase; Provisional

Probab=100.00  E-value=4.8e-39  Score=334.17  Aligned_cols=222  Identities=30%  Similarity=0.419  Sum_probs=179.2

Q ss_pred             hhhHHhhhcCeeEEEEeecccCCCCccchh--ccc-----c--cccCccc----cc-chhhh---cccccccccchHHHH
Q psy4157         210 LARIAIKSGDATAIVAGGQECMSQAPHVIN--IRN-----G--IKLNDAE----MK-DSMVF---DGLTDAFHNIHMGIT  272 (441)
Q Consensus       210 ~A~~~I~sG~advvla~G~E~ms~~P~~~~--~r~-----g--~~~g~~~----~~-~d~~~---~g~~~~~~~~~ma~~  272 (441)
                      .|+.+|++|.+|++||+|+|+|++.|....  .|.     +  ..++...    .. .+.+.   +..++++....|+..
T Consensus       102 ~A~~~I~sG~~d~vlvgG~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~  181 (427)
T PRK09268        102 LVANKIALGQIDSGIAGGVDTTSDAPIAVNEGLRKILLELNRAKTTGDRLKALGKLRPKHLAPEIPRNGEPRTGLSMGEH  181 (427)
T ss_pred             HHHHHHHCCCCCEEEEeeEEccCCCcccccccccccccccccccccCcccccccccccccccccCccccccccCCcHHHH
Confidence            689999999999999999999999886321  110     0  0001000    00 00000   011122223469999


Q ss_pred             HHHHHHHhCCCHHHHHHHHHHHHHHHHhhhhCCCCCccccceeeecCCCceeEeccCCCCCCCCHHHHhcCCCcccc--C
Q psy4157         273 AENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQK--D  350 (441)
Q Consensus       273 Ae~~a~~~Gitre~ld~~A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~g~~~~~~D~~~r~~~t~e~l~~~~~v~~p--~  350 (441)
                      +++||++||+|||+||+||++||+||.+|++.|+|++||+|+.     +   +++|+++|+++|+|+|++++|+|+|  +
T Consensus       182 ae~~a~~ygisre~~d~~Avksh~~A~~A~~~g~~~~einP~~-----~---~~~D~~~r~~~t~e~l~~~~~v~~p~~~  253 (427)
T PRK09268        182 AAITAKEWGISREAQDELAAASHQNLAAAYDRGFFDDLITPFL-----G---LTRDNNLRPDSSLEKLAKLKPVFGKGGR  253 (427)
T ss_pred             HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccCcc-----C---cccCCCCCCCCCHHHHhCCCcccccCCC
Confidence            9999999999999999999999999999999999999999983     2   7899999999999999999999998  6


Q ss_pred             CccccCCCCCCCCCcEEEEEcCHHHHHhcCCCceEEEEEEEeecCCC----CcCCCChHHHHHHHHHHcCCCCCCccEEE
Q psy4157         351 GTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEP----TLMGTGPIPAVNAVLAKAGWSKEEVGYFN  426 (441)
Q Consensus       351 G~lt~~n~~~~sDGAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~~p----~~~~~~~~~Aa~~al~~AGl~~~DID~~E  426 (441)
                      |+||++|||+++|||+|+||+|+++|++++.+|.++|..+...+.+|    ..+..++..|++++|++|||+++|||++|
T Consensus       254 g~lt~~n~~~~~DGAaAvvl~s~~~A~~l~~~p~~~i~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~AGl~~~Did~~E  333 (427)
T PRK09268        254 ATMTAGNSTPLTDGASVVLLASEEWAAEHGLPVLAYLVDAETAAVDFVHGKEGLLMAPAYAVPRLLARNGLTLQDFDFYE  333 (427)
T ss_pred             CceeccccCCCCCceEEEEEecHHHHHHcCCCceEEEEEEEEEcCCcccccchhhccHHHHHHHHHHHcCCCHHHCCEEE
Confidence            99999999999999999999999999999999987775555555554    34667888999999999999999999999


Q ss_pred             ecCCChhhhhhhh
Q psy4157         427 RVATSGGIANRRQ  439 (441)
Q Consensus       427 i~D~Ft~~~~~~~  439 (441)
                      |||||++.++.++
T Consensus       334 i~d~Fa~~~l~~l  346 (427)
T PRK09268        334 IHEAFASQVLATL  346 (427)
T ss_pred             eccccHHHHHHHH
Confidence            9999999955544

>PLN02287 3-ketoacyl-CoA thiolase

Probab=100.00  E-value=3e-38  Score=329.64  Aligned_cols=221  Identities=35%  Similarity=0.510  Sum_probs=188.5

Q ss_pred             hhhHHhhhcCeeEEEEeecccCCCCccchhcccccccCcccccchhhhcccccccccchHHHHHHHHHHHhCCCHHHHHH
Q psy4157         210 LARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDE  289 (441)
Q Consensus       210 ~A~~~I~sG~advvla~G~E~ms~~P~~~~~r~g~~~g~~~~~~d~~~~g~~~~~~~~~ma~~Ae~~a~~~Gitre~ld~  289 (441)
                      .|+.+|.+|.+|++||+|+|+|+..|.....    .+..  .+.+  +....+  ....|++.+++||++||+|||+||+
T Consensus       143 ~Aa~~I~sG~~dvvLv~GvE~mS~~p~~~~~----~~~~--~~~~--~~~~~~--~~~~~g~~a~~y~~~yGitrE~la~  212 (452)
T PLN02287        143 DVAAAIKAGFYDIGIGAGVESMTTNPMAWEG----GVNP--RVES--FSQAQD--CLLPMGITSENVAERFGVTREEQDQ  212 (452)
T ss_pred             HHHHHHHcCCCCeEEEEeEEecCCCchhhcc----ccCc--hhhc--cccccc--cCcCHHHHHHHHHHHhCCCHHHHHH
Confidence            6899999999999999999999998852210    0100  0000  001111  1235999999999999999999999


Q ss_pred             HHHHHHHHHHhhhhCCCCCccccceeeecC--C-Cc---eeEeccCCCCCCCCHHHHhcCCCccccCCccccCCCCCCCC
Q psy4157         290 YAYQSQVKTAKAQEGGYFDEEIVPVVISTR--K-GD---VVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGIND  363 (441)
Q Consensus       290 ~A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~--~-g~---~~~~~D~~~r~~~t~e~l~~~~~v~~p~G~lt~~n~~~~sD  363 (441)
                      ||++||+||.+|+..|+|++||+|+.++.+  + |.   +.++.|+++|.++++|++.+++|+|+|+|+||++|||+++|
T Consensus       213 vAvksh~nAa~np~ag~f~~ei~pv~~~~~~~~~~~~~~~~~~~De~~r~~~~~e~l~~l~~v~~~~g~lt~~~~s~~sD  292 (452)
T PLN02287        213 AAVESHRKAAAATASGKFKDEIVPVHTKIVDPKTGEEKPIVISVDDGIRPNTTLADLAKLKPVFKKNGTTTAGNSSQVSD  292 (452)
T ss_pred             HHHHHHHHHHhhhhcCCcccceeeeeccccccccCCccceeecccCCCCCCCCHHHHhcCCCccCCCCCEeccccCCcCC
Confidence            999999999998888899999999987641  1 22   57899999999999999999999999889999999999999


Q ss_pred             CcEEEEEcCHHHHHhcCCCceEEEEEEEeecCCCCcCCCChHHHHHHHHHHcCCCCCCccEEEecCCChhhhhhhhc
Q psy4157         364 GAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATSGGIANRRQE  440 (441)
Q Consensus       364 GAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~~p~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~~~~~~~  440 (441)
                      ||+|+||+|+++|++++.+|+++++++...+.+|..+..+++.|++++|++|||+++|||+|||||+|++....++|
T Consensus       293 GAaalvl~see~A~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~A~~~al~~Agl~~~DID~~Ei~daFa~~~l~~~e  369 (452)
T PLN02287        293 GAGAVLLMKRSVAMQKGLPILGVFRSFAAVGVDPAVMGIGPAVAIPAAVKAAGLELDDIDLFEINEAFASQFVYCCK  369 (452)
T ss_pred             ceEEEEEeeHHHHHHCCCCeEEEEEEEeeccCCCccchHHHHHHHHHHHHHcCCCHHHCCEEEecchHHHHHHHHHH
Confidence            99999999999999999999999999988777787777788999999999999999999999999999999999887

>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases

Probab=100.00  E-value=7.2e-38  Score=322.11  Aligned_cols=230  Identities=46%  Similarity=0.696  Sum_probs=194.5

Q ss_pred             hhhHHhhhcCeeEEEEeecccCCCCccchh-c-ccccccCcccccchhhhc-ccccccccchHHHHHHHHHHHhCCCHHH
Q psy4157         210 LARIAIKSGDATAIVAGGQECMSQAPHVIN-I-RNGIKLNDAEMKDSMVFD-GLTDAFHNIHMGITAENIAKKWSISRLE  286 (441)
Q Consensus       210 ~A~~~I~sG~advvla~G~E~ms~~P~~~~-~-r~g~~~g~~~~~~d~~~~-g~~~~~~~~~ma~~Ae~~a~~~Gitre~  286 (441)
                      .|+.+|++|.+++||++|+|+|+..+.... . +....++. ....++..+ ++..++....|++.+++||++||+|||+
T Consensus        92 ~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~a~~a~~y~~~yG~t~e~  170 (386)
T TIGR01930        92 LAAQLIRAGEADVVVAGGVESMSRVPYSLPRSRREGVDPGR-FELEDQILKDGLTDPLNGLSMGLTAENLAKKYGISREE  170 (386)
T ss_pred             HHHHHHHCCCCCEEEEEEehhhccCccccccccccccccCc-cccchhhcCccccccccCCCHHHHHHHHHHHcCCCHHH
Confidence            689999999999999999999998774321 0 11111111 001111111 3333333457999999999999999999


Q ss_pred             HHHHHHHHHHHHHhhhhCCCCCccccceeeecCCCceeEeccCCCCCCCCHHHHhcCCCccccCCccccCCCCCCCCCcE
Q psy4157         287 QDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAA  366 (441)
Q Consensus       287 ld~~A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~g~~~~~~D~~~r~~~t~e~l~~~~~v~~p~G~lt~~n~~~~sDGAA  366 (441)
                      |++|+++||+||.+++++|.|+.||+|+.++.+++.+++..|+++|+++|+|+|++++|+++|.|+||++|||+++|||+
T Consensus       171 la~vav~~~~~A~~n~~~g~~~~~i~P~a~~~~~~~~~~~~da~~r~~~t~e~v~~s~~i~~P~~~l~~~d~~~~~dGAa  250 (386)
T TIGR01930       171 QDEYALRSHQRAAKAWEEGLFKDEIVPVSVKGRKGPVTVSTDEGIRPNTTLEKLAKLKPAFDPNGTVTAGNSSPLNDGAA  250 (386)
T ss_pred             HHHHHHHHHHHHHHHHHcCCCCCeEEEEEeccCCCCeEeCCCCCCCCCCCHHHHhCCCCCcCCCCeeeCCccCCCCccee
Confidence            99999999999999889999999999997766666678899999999999999999999999989999999999999999


Q ss_pred             EEEEcCHHHHHhcCCCceEEEEEEEeecCCCCcCCCChHHHHHHHHHHcCCCCCCccEEEecCCChhhhhhhhc
Q psy4157         367 AVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATSGGIANRRQE  440 (441)
Q Consensus       367 AvVLaSe~~A~~lg~~p~a~I~~~~~~~~~p~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~~~~~~~  440 (441)
                      |+||+|++.|++++.+|+++|.+++..+..|..+..++..|++++|+++||+++|||++|+||||++.++.++|
T Consensus       251 a~vl~s~~~A~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~a~~~a~~~Agi~~~did~~e~~d~fa~~~~~~~e  324 (386)
T TIGR01930       251 ALLLMSEERAKELGLTPLARIVSFAVAGVDPEIMGLGPVPAIPKALKKAGLSISDIDLFEINEAFAAQVLACIK  324 (386)
T ss_pred             EEEEecHHHHHHCCCCccEEEEEEEEecCCCccccccHHHHHHHHHHHcCCCHHHCCeeehcchhHHHHHHHHH
Confidence            99999999999999999999999998877777666778899999999999999999999999999999998887

This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt

>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine

Probab=100.00  E-value=1.8e-37  Score=319.17  Aligned_cols=229  Identities=50%  Similarity=0.742  Sum_probs=194.9

Q ss_pred             hhhHHhhhcCeeEEEEeecccCCCCccchh-cccccccCcccccchhh-hcccccccccchHHHHHHHHHHHhCCCHHHH
Q psy4157         210 LARIAIKSGDATAIVAGGQECMSQAPHVIN-IRNGIKLNDAEMKDSMV-FDGLTDAFHNIHMGITAENIAKKWSISRLEQ  287 (441)
Q Consensus       210 ~A~~~I~sG~advvla~G~E~ms~~P~~~~-~r~g~~~g~~~~~~d~~-~~g~~~~~~~~~ma~~Ae~~a~~~Gitre~l  287 (441)
                      .|+.+|++|.+++||++|+|+|+..|.... .+.+...+. .. .... ..++..++....|++.+++||++||+|||++
T Consensus        93 ~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~a~~a~~~~~~yg~tre~l  170 (386)
T cd00751          93 LAAQSIAAGEADVVVAGGVESMSRAPYLLPKARRGGRLGL-NT-LDGMLDDGLTDPFTGLSMGITAENVAEKYGISREEQ  170 (386)
T ss_pred             HHHHHHHCCCCCeEEEeeeeccccCcccccccccccccCc-cc-cccccccccccccCCCCHHHHHHHHHHHcCCCHHHH
Confidence            688999999999999999999998875322 111110100 00 0111 1133333334578999999999999999999


Q ss_pred             HHHHHHHHHHHHhhhhCCCCCccccceeeecCCCceeEeccCCCCCCCCHHHHhcCCCccccCCccccCCCCCCCCCcEE
Q psy4157         288 DEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAA  367 (441)
Q Consensus       288 d~~A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~g~~~~~~D~~~r~~~t~e~l~~~~~v~~p~G~lt~~n~~~~sDGAAA  367 (441)
                      |+||++||+||.+|++++.+.++|+|+.++.++++.++++|+++|+++|+|+|++++++++|.|+||++|||+++|||++
T Consensus       171 a~vav~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~a~~r~~~t~e~v~~s~~i~~p~g~l~~~d~~~~~dGaaa  250 (386)
T cd00751         171 DEFALRSHQRAAAAQEAGRFKDEIVPVEVPGRKGPVVVDRDEGPRPDTTLEKLAKLKPAFKKDGTVTAGNASGINDGAAA  250 (386)
T ss_pred             HHHHHHHHHHHHHHHHcCCCcCeEEEEEeccCCCCeEeCCCCCCCCCCCHHHHhCCCCCcCCCCcEeCCcCCCCCcceEE
Confidence            99999999999999999999999999998876666788999999999999999999999998899999999999999999


Q ss_pred             EEEcCHHHHHhcCCCceEEEEEEEeecCCCCcCCCChHHHHHHHHHHcCCCCCCccEEEecCCChhhhhhhhc
Q psy4157         368 VLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATSGGIANRRQE  440 (441)
Q Consensus       368 vVLaSe~~A~~lg~~p~a~I~~~~~~~~~p~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~~~~~~~  440 (441)
                      |||+|++.|++++.+|+++|++++.....+..+..++..+++++|+++||+++|||++|+||+|++..+.++|
T Consensus       251 vvl~s~~~a~~~~~~~~~~I~g~~~~~~~~~~~~~~~~~a~~~a~~~Agi~~~did~~e~~d~f~~~~~~~~e  323 (386)
T cd00751         251 VLLMSEEKAKELGLKPLARIVGYAVAGVDPAIMGIGPVPAIPKALKRAGLTLDDIDLIEINEAFAAQALACLK  323 (386)
T ss_pred             EEEecHHHHHHCCCCeeEEEEEEEEccCCCcccchhHHHHHHHHHHHcCCCHHHcCEEEeechhHHHHHHHHH
Confidence            9999999999999999999999998888777777788999999999999999999999999999999998887

They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.

>PRK07108 acetyl-CoA acetyltransferase; Provisional

Probab=100.00  E-value=9.1e-38  Score=321.57  Aligned_cols=221  Identities=35%  Similarity=0.529  Sum_probs=188.9

Q ss_pred             chhhHHhhhcCeeEEEEeecccCCCCccchhcccccccCcccccchhhhcccccccccchHHHHHHHHHHHhCCCHHHHH
Q psy4157         209 PLARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQD  288 (441)
Q Consensus       209 ~~A~~~I~sG~advvla~G~E~ms~~P~~~~~r~g~~~g~~~~~~d~~~~g~~~~~~~~~ma~~Ae~~a~~~Gitre~ld  288 (441)
                      .+|+.+|++|++|++|++|+|+||+.|....   +...+.  ..   ......+.+  ..|+.++++++.+|+++|+++|
T Consensus        98 ~~A~~~I~sG~~d~vlagGvE~ms~~p~~~~---~~~~~~--~~---~~~~~~~~~--~~m~~~ae~~a~~~~i~r~~~d  167 (392)
T PRK07108         98 ALAAQRVIAGEGDVFVAGGVESISCVQNEMN---RHMLRE--GW---LVEHKPEIY--WSMLQTAENVAKRYGISKERQD  167 (392)
T ss_pred             HHHHHHHHCCCCCEEEEEEEeccCCCCCcCC---CcCccc--hh---hhccCCccc--cCHHHHHHHHHHHhCCCHHHHH
Confidence            3689999999999999999999999885321   000100  00   000000101  3578889999999999999999


Q ss_pred             HHHHHHHHHHHhhhhCCCCCccccceeeec----C-CC-----ceeEeccCCCCCCCCHHHHhcCCCccccCCccccCCC
Q psy4157         289 EYAYQSQVKTAKAQEGGYFDEEIVPVVIST----R-KG-----DVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNA  358 (441)
Q Consensus       289 ~~A~~S~~~A~~A~~~g~f~~ei~Pv~v~~----~-~g-----~~~~~~D~~~r~~~t~e~l~~~~~v~~p~G~lt~~n~  358 (441)
                      +|+..||++|..++++|.|++||+|+.+++    + .+     .+++++|+++|+++|+|+|.+++|+| +.|+||++||
T Consensus       168 ~~a~~s~~~A~~A~k~g~~~~ei~pv~~~~~~~n~~a~~~~~~~~~~~~de~~r~~~t~e~l~~l~~~~-~~g~lt~~n~  246 (392)
T PRK07108        168 EYGVQSQQRAAAAQAAGRFDDEIVPITVTAGVADKATGRLFTKEVTVSADEGIRPDTTLEGVSKIRSAL-PGGVITAGNA  246 (392)
T ss_pred             HHHHHHHHHHHHHHHcCCCcCceeeEEecccccccccCcccccceeEccCCCCCCCCCHHHHhcCCCCC-CCCCCcCCcC
Confidence            999999999999999999999999997652    1 22     46789999999999999999999998 5689999999


Q ss_pred             CCCCCCcEEEEEcCHHHHHhcCCCceEEEEEEEeecCCCCcCCCChHHHHHHHHHHcCCCCCCccEEEecCCChhhhhhh
Q psy4157         359 SGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATSGGIANRR  438 (441)
Q Consensus       359 ~~~sDGAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~~p~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~~~~~  438 (441)
                      |+++|||+|+||+|++.|++++++|+++|++++..+.+|..+..+++.|+++||+++||+++|||+||+||+|++....+
T Consensus       247 ~~~~DGAaa~vl~s~~~A~~~g~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~Did~~ei~eafa~~~l~~  326 (392)
T PRK07108        247 SQFSDGASACVVMNAKVAEREGLQPLGIFRGFAVAGCEPDEMGIGPVFAVPKLLKQAGLKVDDIDLWELNEAFAVQVLYC  326 (392)
T ss_pred             CCCCCceEEEEEecHHHHHHCCCCceEEEEEEEEeccCCcccchhHHHHHHHHHHHcCCCHHHcCchHhhhHHHHHHHHH
Confidence            99999999999999999999999999999999999988888888899999999999999999999999999999999988


Q ss_pred             hc
Q psy4157         439 QE  440 (441)
Q Consensus       439 ~~  440 (441)
                      +|
T Consensus       327 ~e  328 (392)
T PRK07108        327 RD  328 (392)
T ss_pred             HH
Confidence            76

>PRK06690 acetyl-CoA acetyltransferase; Provisional

Probab=100.00  E-value=2.1e-37  Score=314.92  Aligned_cols=207  Identities=36%  Similarity=0.534  Sum_probs=183.1

Q ss_pred             chhhHHhhhcCeeEEEEeecccCCCCccchhcccccccCcccccchhhhcccccccccchHHHHHHHHHHHhCCCHHHHH
Q psy4157         209 PLARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQD  288 (441)
Q Consensus       209 ~~A~~~I~sG~advvla~G~E~ms~~P~~~~~r~g~~~g~~~~~~d~~~~g~~~~~~~~~ma~~Ae~~a~~~Gitre~ld  288 (441)
                      ..|+..|++|++|++|++|+|+|++.|+..  +..  +..     +.        +....|++.|++||++||+|||+||
T Consensus        90 ~~a~~~I~sG~~d~~l~gG~E~ms~~p~~~--~~~--~~~-----~~--------~~~~~~~~~a~~~~~~ygitre~~d  152 (361)
T PRK06690         90 RTACHFIQGGAGKCYIAGGVESTSTSPFQN--RAR--FSP-----ET--------IGDPDMGVAAEYVAERYNITREMQD  152 (361)
T ss_pred             HHHHHHHHCCCCCEEEEeccccccCCCccc--ccc--cCc-----cc--------ccCccHHHHHHHHHHHhCCCHHHHH
Confidence            378999999999999999999999988521  100  100     00        0112499999999999999999999


Q ss_pred             HHHHHHHHHHHhhhhCCCCCccccceeeecCCCceeEeccCCCCCCCCHHHH-hcCCCccccCCccccCCCCCCCCCcEE
Q psy4157         289 EYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEAL-QKLRPVFQKDGTVTAGNASGINDGAAA  367 (441)
Q Consensus       289 ~~A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~g~~~~~~D~~~r~~~t~e~l-~~~~~v~~p~G~lt~~n~~~~sDGAAA  367 (441)
                      +||..||+|+.+|+++++|++||+|++     +   ++ |+++|+.+|+|++ .+++|+|+|.|+||++|||+++|||+|
T Consensus       153 ~~A~~s~k~a~~a~~n~~~~~ei~~v~-----~---~~-d~~~r~~~~~e~ll~~l~p~~~~~g~lt~~~~~~~~DGAaA  223 (361)
T PRK06690        153 EYACLSYKRTLQALEKGYIHEEILSFN-----G---LL-DESIKKEMNYERIIKRTKPAFLHNGTVTAGNSCGVNDGACA  223 (361)
T ss_pred             HHHHHHHHHHHHHHHCCCCCCceeccc-----C---cc-ccccCCCCCHHHHhhcCCCcccCCCceeccccCCCCCCeEE
Confidence            999999999999999999999999985     1   55 8999999999999 777999988899999999999999999


Q ss_pred             EEEcCHHHHHhcCCCceEEEEEEEeecCCCCcCCCChHHHHHHHHHHcCCCCCCccEEEecCCChhhhhhhhcC
Q psy4157         368 VLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATSGGIANRRQER  441 (441)
Q Consensus       368 vVLaSe~~A~~lg~~p~a~I~~~~~~~~~p~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~~~~~~~~  441 (441)
                      +||+|++.|++++++|+++|++++..+.+|..+..+++.+++++|+++||+++|||+||+||+|+++...++|.
T Consensus       224 vvl~s~e~A~~lg~~p~~~i~~~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~Did~~ei~eafa~~~~~~~e~  297 (361)
T PRK06690        224 VLVMEEGQARKLGYKPVLRFVRSAVVGVDPNLPGTGPIFAVNKLLNEMNMKVEDIDYFEINEAFASKVVACAKE  297 (361)
T ss_pred             EEEecHHHHHHcCCCceEEEEEEEEeccCcccchhHHHHHHHHHHHHcCCCHHHcCEeeecchhHHHHHHHHHh
Confidence            99999999999999999999999988888888888899999999999999999999999999999999998873

>KOG1389|consensus

Probab=100.00  E-value=2.9e-38  Score=303.05  Aligned_cols=233  Identities=35%  Similarity=0.474  Sum_probs=177.7

Q ss_pred             CCCchHhhHHHHHHHhCCCHHHHhHHHHhcHHHHHHHHhCCCCCcceeee--EeccCCCceeeeccCCCCCCccHHHhhh
Q psy4157          35 HNIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPV--VISTRKGDVVVAKDEYPKANTSVDALQK  112 (441)
Q Consensus        35 ~~~~mg~~ae~~a~~~~isRe~~D~~a~~s~~ra~~a~~~g~~~~ei~p~--~~~~~~g~~~~~~de~~~~~~~~~~l~~  112 (441)
                      +-++||+|.||+|++|||||||||+||+.||+||++|..+|+|++||+||  ++.+.+|+.      -            
T Consensus       178 CllpmGitsEnva~rfgvsR~eqD~~Av~S~kkAa~A~~~G~f~dEIiPv~tkv~D~~g~~------k------------  239 (435)
T KOG1389|consen  178 CLLPMGITSENVAERFGVSREEQDEAAVDSHKKAAAATAKGKFKDEIIPVKTKVVDPKGDE------K------------  239 (435)
T ss_pred             cccccccchHHHHHHhCCChhhhhHHHHHHHHHHHHHhhcCcchhheeeeeeeccCCcCCc------c------------
Confidence            34689999999999999999999999999999999999999999999999  677666531      0            


Q ss_pred             cCcccccCCceecCCCCCCCCccccchhhhhcccCceeeecccCCCCCCCHHHHhcCCCccCCCCcccCCCCCCccccch
Q psy4157         113 LRPVFQKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAA  192 (441)
Q Consensus       113 l~p~f~~~g~~t~~~~~~~~dg~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~p~~~~~g~vtagn~s~~~Dgaa  192 (441)
                        |                                 .++..||++|+++|++.|++|||+|.++|+.|+||||+++|||+
T Consensus       240 --~---------------------------------i~v~~DeGiRp~ttl~~l~klkpvFkkdGttTagNsSQvSDGa~  284 (435)
T KOG1389|consen  240 --P---------------------------------ITVSVDEGIRPNTTLESLAKLKPVFKKDGTTTAGNSSQVSDGAG  284 (435)
T ss_pred             --c---------------------------------eeEecCCCCCCCcchhHHhhcchhhhcCCccccCchhhcccchh
Confidence              0                                 12344555555555555555666666666789999999999999


Q ss_pred             hhhhhhHHHHHhccCcchhhHHhhhcCeeEEEE-eecccCCCCccchhcccccccCcccccchhhhcccccccccchHHH
Q psy4157         193 AVLLMSYKRAQARNIQPLARIAIKSGDATAIVA-GGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGI  271 (441)
Q Consensus       193 ~~ll~s~~~a~~~gl~~~A~~~I~sG~advvla-~G~E~ms~~P~~~~~r~g~~~g~~~~~~d~~~~g~~~~~~~~~ma~  271 (441)
                      ++|||.+..|.++||+.++..      .+...+ +.++.|+.+|...                                 
T Consensus       285 aVLLmkRs~A~qlgLPvlgvf------r~f~~vGv~P~iMGiGPavA---------------------------------  325 (435)
T KOG1389|consen  285 AVLLMKRSVAMQLGLPVLGVF------RDFAAVGVPPAIMGIGPAVA---------------------------------  325 (435)
T ss_pred             hhhhhhhhhHhhcCCceeEEe------eeeeeecCCHHHcCCCchhh---------------------------------
Confidence            999999999999999987753      233333 3456677766532                                 


Q ss_pred             HHHHHHHHhCCCHHHHHHH----HHHHHHHHHhhhhCCCCCccccceeeecCCCceeEeccCCCCCCCCHHHHhcCCCcc
Q psy4157         272 TAENIAKKWSISRLEQDEY----AYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVF  347 (441)
Q Consensus       272 ~Ae~~a~~~Gitre~ld~~----A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~g~~~~~~D~~~r~~~t~e~l~~~~~v~  347 (441)
                       -+...++.|+..+|+|.|    |++||..++. ++.+.     -|-++|.++|.+.+   .||...+..+.+.++-...
T Consensus       326 -Ip~alk~aGL~v~did~FEINEAFAsQ~~yc~-~KL~l-----d~ekVN~~GGaiAl---GHPlGatGAR~VaTlL~em  395 (435)
T KOG1389|consen  326 -IPKALKAAGLEVDDIDLFEINEAFASQALYCR-NKLGL-----DPEKVNVNGGAIAL---GHPLGATGARCVATLLHEM  395 (435)
T ss_pred             -hHHHHHHcCCcccccceeehhHHHHHHHHHHH-HHhCC-----CHHHcCCCCceeec---cCCcCCccHhHHHHHHHHH
Confidence             144566667777777777    8999998873 44433     35578888999888   8999999999999888777


Q ss_pred             ccC------CccccCCCCCCCCCcEEEEEc
Q psy4157         348 QKD------GTVTAGNASGINDGAAAVLLM  371 (441)
Q Consensus       348 ~p~------G~lt~~n~~~~sDGAAAvVLa  371 (441)
                      ++.      |++++|--+++  |||||+.-
T Consensus       396 Krrgkd~~~GVvSmCIGtGm--GaAAvFer  423 (435)
T KOG1389|consen  396 KRRGKDCRFGVVSMCIGTGM--GAAAVFER  423 (435)
T ss_pred             HhhccccccceEEEeecCCc--chheeeec
Confidence            643      57777776666  89888753

>PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2

Probab=100.00  E-value=5.3e-38  Score=307.35  Aligned_cols=141  Identities=52%  Similarity=0.774  Sum_probs=123.9

Q ss_pred             CCCCCccc-ccccCcCCCccccccccccCCcccccCCCchHhhHHHHHHHhCCCHHHHhHHHHhcHHHHHHHHhCCCCCc
Q psy4157           1 MSQAPHVI-NIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDE   79 (441)
Q Consensus         1 mS~~P~~~-~~r~g~~~g~~~~~d~~~~~~l~d~~~~~~mg~~ae~~a~~~~isRe~~D~~a~~s~~ra~~a~~~g~~~~   79 (441)
                      ||+.|+.. ..|+++.+|+....|.++.++++|++...+||+|||++|++||||||+||+||++||+||++||++|+|++
T Consensus       118 mS~~p~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~Mg~tAE~~a~~ygisRee~D~~A~~Sh~rA~~A~~~G~f~~  197 (264)
T PF00108_consen  118 MSRVPMGLSSRRWGAPLGDAKLEDSLLRDGLYDPYAGQPMGITAENLAKKYGISREEQDEYAVRSHQRAAAAQDEGRFDD  197 (264)
T ss_dssp             TTTSCEEECCTTSTSSSSGEEEEEHHHHHTTCCTTTTSHHHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHHHHTTTTTT
T ss_pred             cccccccccccccccccCccccccccccccccccccccccccccccccccCCcCHHHHhhhhhcCHHHHHHhccccchhh
Confidence            89999887 58899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ceeeeEeccCCCc-eeeeccCCCCCCccHHHhhhcCcccccC-CceecCCCCCCCCccccchhh
Q psy4157          80 EIVPVVISTRKGD-VVVAKDEYPKANTSVDALQKLRPVFQKD-GTVTAGNASGINDGAAAGKLY  141 (441)
Q Consensus        80 ei~p~~~~~~~g~-~~~~~de~~~~~~~~~~l~~l~p~f~~~-g~~t~~~~~~~~dg~~~~~~~  141 (441)
                      ||+||+++.++|+ .+|++||++|+++++|+|+||||+|.++ |+|||||||+++||||+++|+
T Consensus       198 eIvpv~~~~~~g~~~~~~~De~~r~~~~~e~l~~L~p~f~~~~G~vTagnss~~~DGAaa~~l~  261 (264)
T PF00108_consen  198 EIVPVEVPDKKGEEVTVDRDEGIRPDTTLEKLAKLKPAFRKDGGTVTAGNSSPLNDGAAAVLLM  261 (264)
T ss_dssp             TBE-EEEEETTSEEEEE-S-STCGTT--HHHHHTS-BSSSTTTSS-BTTTB--BEEEEEEEEEE
T ss_pred             heeeEeeeccccceeeeeccchhhcchhHHHHhcccccccccccccccccCCCccchhheEEEe
Confidence            9999999988897 6899999999999999999999999997 999999999999999998654

3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 1PXT_B 1AFW_B 1WL4_A 1WL5_A 4E1L_B 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2WUA_B ....

>KOG1389|consensus

Probab=100.00  E-value=1.5e-37  Score=298.15  Aligned_cols=233  Identities=36%  Similarity=0.489  Sum_probs=197.5

Q ss_pred             hhhhHHHHHhccCcchh--hHHhhhcCeeEEEEeecccCCCC-ccchhcccccccCcccccchhhhcccccccccchHHH
Q psy4157         195 LLMSYKRAQARNIQPLA--RIAIKSGDATAIVAGGQECMSQA-PHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGI  271 (441)
Q Consensus       195 ll~s~~~a~~~gl~~~A--~~~I~sG~advvla~G~E~ms~~-P~~~~~r~g~~~g~~~~~~d~~~~g~~~~~~~~~ma~  271 (441)
                      -++...+.|..||+..+  +..|++|.+|+.++.|+|+|+.. |...+......++......|          +-..||.
T Consensus       115 pv~tvNRqCsSGLqaVadiA~~Ir~G~ydIGla~GvESMt~~~~~g~~g~~~~~~~~~~~A~d----------CllpmGi  184 (435)
T KOG1389|consen  115 PVRTVNRQCSSGLQAVADIAAKIRAGFYDIGLAAGVESMTTNYPRGWPGSINPRLQKFEKARD----------CLLPMGI  184 (435)
T ss_pred             chhhhhhhhhhHHHHHHHHHHHHhcCceeeecccchhhhcccCCCCCccccChhhhhhhHHhh----------ccccccc
Confidence            34566688988986432  45799999999999999999987 44322000001111011111          2357899


Q ss_pred             HHHHHHHHhCCCHHHHHHHHHHHHHHHHhhhhCCCCCccccce--eeecCCC---ceeEeccCCCCCCCCHHHHhcCCCc
Q psy4157         272 TAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPV--VISTRKG---DVVVAKDEYPKANTTVEALQKLRPV  346 (441)
Q Consensus       272 ~Ae~~a~~~Gitre~ld~~A~~S~~~A~~A~~~g~f~~ei~Pv--~v~~~~g---~~~~~~D~~~r~~~t~e~l~~~~~v  346 (441)
                      +.|+++++||++|+++|+||+.||++|.+|.+.|.|..||+|+  ++.+.+|   .+++..|+.+|+.+|++.|.+++|+
T Consensus       185 tsEnva~rfgvsR~eqD~~Av~S~kkAa~A~~~G~f~dEIiPv~tkv~D~~g~~k~i~v~~DeGiRp~ttl~~l~klkpv  264 (435)
T KOG1389|consen  185 TSENVAERFGVSREEQDEAAVDSHKKAAAATAKGKFKDEIIPVKTKVVDPKGDEKPITVSVDEGIRPNTTLESLAKLKPV  264 (435)
T ss_pred             chHHHHHHhCCChhhhhHHHHHHHHHHHHHhhcCcchhheeeeeeeccCCcCCccceeEecCCCCCCCcchhHHhhcchh
Confidence            9999999999999999999999999999999999999999999  4444443   3777889999999999999999999


Q ss_pred             cccCCccccCCCCCCCCCcEEEEEcCHHHHHhcCCCceEEEEEEEeecCCCCcCCCChHHHHHHHHHHcCCCCCCccEEE
Q psy4157         347 FQKDGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYFN  426 (441)
Q Consensus       347 ~~p~G~lt~~n~~~~sDGAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~~p~~~~~~~~~Aa~~al~~AGl~~~DID~~E  426 (441)
                      |+++|+.|++|+|++||||+||+|+.+..|.++|++.++....+..++.+|..|+.+|++|++++++.+||..+|||+||
T Consensus       265 FkkdGttTagNsSQvSDGa~aVLLmkRs~A~qlgLPvlgvfr~f~~vGv~P~iMGiGPavAIp~alk~aGL~v~did~FE  344 (435)
T KOG1389|consen  265 FKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMQLGLPVLGVFRDFAAVGVPPAIMGIGPAVAIPKALKAAGLEVDDIDLFE  344 (435)
T ss_pred             hhcCCccccCchhhcccchhhhhhhhhhhHhhcCCceeEEeeeeeeecCCHHHcCCCchhhhHHHHHHcCCcccccceee
Confidence            99999999999999999999999999999999999989999999999999999999999999999999999999999999


Q ss_pred             ecCCChhhhhh
Q psy4157         427 RVATSGGIANR  437 (441)
Q Consensus       427 i~D~Ft~~~~~  437 (441)
                      |||+|+..+..
T Consensus       345 INEAFAsQ~~y  355 (435)
T KOG1389|consen  345 INEAFASQALY  355 (435)
T ss_pred             hhHHHHHHHHH
Confidence            99999987653

>PRK06025 acetyl-CoA acetyltransferase; Provisional

Probab=100.00  E-value=8.6e-37  Score=313.95  Aligned_cols=168  Identities=30%  Similarity=0.421  Sum_probs=133.6

Q ss_pred             CCCCCcccc--cccCcCCCccccccccccCCcccccCCCchHhhHHHHHHHhCCCHHHHhHHHHhcHHHHHHHHhCCCCC
Q psy4157           1 MSQAPHVIN--IRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFD   78 (441)
Q Consensus         1 mS~~P~~~~--~r~g~~~g~~~~~d~~~~~~l~d~~~~~~mg~~ae~~a~~~~isRe~~D~~a~~s~~ra~~a~~~g~~~   78 (441)
                      |||+||++.  .|+|+   +..+.|.+ .++++|++.+.+||+||||+|++||||||+||+||++||+||++||++|+|+
T Consensus       122 mS~~P~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~Mg~~ae~~a~~~~isRe~~D~~A~~Sh~rA~~A~~~G~f~  197 (417)
T PRK06025        122 MSYTAAMAAEDMAAGK---PPLGMGSG-NLRLRALHPQSHQGVCGDAIATMEGITREALDALGLESQRRAARAIKEGRFD  197 (417)
T ss_pred             cCCCcccccccccCCC---Cccccccc-CcccccccCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence            999998543  45553   22333433 5788888888999999999999999999999999999999999999999999


Q ss_pred             cceeeeEeccCCCceeeeccCCCCCCccHHHhhhcCccccc--------CCceecCCCCCCCCccccchhhhhcccCcee
Q psy4157          79 EEIVPVVISTRKGDVVVAKDEYPKANTSVDALQKLRPVFQK--------DGTVTAGNASGINDGAAAGKLYLFTRKGDVV  150 (441)
Q Consensus        79 ~ei~p~~~~~~~g~~~~~~de~~~~~~~~~~l~~l~p~f~~--------~g~~t~~~~~~~~dg~~~~~~~~~~~~~~~~  150 (441)
                      +|||||+  +++|..+|++||++|+++|+|+|++|||+|++        +|+. .+                        
T Consensus       198 ~eIvPv~--~~~~~~~~~~De~~R~~~t~e~la~L~p~F~~~~~~~~~~~g~~-~~------------------------  250 (417)
T PRK06025        198 KSLVPVY--RDDGSVALDHEEFPRPQTTAEGLAALKPAFTAIADYPLDDKGTT-YR------------------------  250 (417)
T ss_pred             CeEeeEE--cCCCCEEecCCCCCCCCCCHHHHcCCCCCccccccccccCCccc-cc------------------------
Confidence            9999998  34555678999999999999999999999973        5531 00                        


Q ss_pred             eecccCCCCCCCHHHHhcCCCccCCCCcccCCCCCCccccchhhhhhhHHHHHhccCcchhh
Q psy4157         151 VAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQARNIQPLAR  212 (441)
Q Consensus       151 ~~~d~~~~~~~~~~~~~~l~p~~~~~g~vtagn~s~~~Dgaa~~ll~s~~~a~~~gl~~~A~  212 (441)
                       .-++            ..+|......+||+||+|+++|||+++||+++++++++|+.+.++
T Consensus       251 -~~~~------------~~~~~~~~~~~vTagNss~~sDGAAAvVL~See~A~~lg~~p~a~  299 (417)
T PRK06025        251 -GLIN------------QKYPDLEIKHVHHAGNSSGVVDGAAALLLASKAYAEKHGLKPRAR  299 (417)
T ss_pred             -cccc------------cccccccccccccccccCCCCcceEEEEEecHHHHHHcCCCCcEE
Confidence             0000            012323223459999999999999999999999999999877554

>PLN02644 acetyl-CoA C-acetyltransferase

Probab=100.00  E-value=1.4e-35  Score=305.89  Aligned_cols=229  Identities=40%  Similarity=0.545  Sum_probs=188.6

Q ss_pred             hhhHHhhhcCeeEEEEeecccCCCCccchh-cccccccCcccccchhhh-cccccccccchHHHHHHHHHHHhCCCHHHH
Q psy4157         210 LARIAIKSGDATAIVAGGQECMSQAPHVIN-IRNGIKLNDAEMKDSMVF-DGLTDAFHNIHMGITAENIAKKWSISRLEQ  287 (441)
Q Consensus       210 ~A~~~I~sG~advvla~G~E~ms~~P~~~~-~r~g~~~g~~~~~~d~~~-~g~~~~~~~~~ma~~Ae~~a~~~Gitre~l  287 (441)
                      .|+.+|++|++|+||++|+|+|+..|.... .+.+..++. ....+.++ ..++.++....|++.|++||++||+|||++
T Consensus        96 ~Aa~~I~sG~~d~vlv~G~E~~s~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~yG~tre~l  174 (394)
T PLN02644         96 LAAQSIQLGINDVVVAGGMESMSNAPKYLPEARKGSRLGH-DTVVDGMLKDGLWDVYNDFGMGVCAELCADQYSISREEQ  174 (394)
T ss_pred             HHHHHHHcCCCCEEEEEeEEecCCCccccccccccccccc-chhhhhccccccccccCCCcHHHHHHHHHHHhCCCHHHH
Confidence            789999999999999999999998874221 111111111 00001111 122233333468999999999999999999


Q ss_pred             HHHHHHHHHHHHhhhhCCCCCccccceeeecCCCc--eeEeccCCCCCCCCHHHHhcCCCcccc-CCccccCCCCCCCCC
Q psy4157         288 DEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGD--VVVAKDEYPKANTTVEALQKLRPVFQK-DGTVTAGNASGINDG  364 (441)
Q Consensus       288 d~~A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~g~--~~~~~D~~~r~~~t~e~l~~~~~v~~p-~G~lt~~n~~~~sDG  364 (441)
                      |+|+++||+|+.+++++++|++||+|+++.+++++  ..++.|+++| .++.+.|.+++|+|++ +|++|++|||+++||
T Consensus       175 a~vav~s~~~a~~a~~~~~~~~ei~~~~v~~~~~~~~~~~~~de~~~-~~~~~~l~~l~p~f~~~~g~vt~~~~~~~~DG  253 (394)
T PLN02644        175 DAYAIQSYERAIAAQEAGAFAWEIVPVEVPGGRGRPSVIVDKDEGLG-KFDPAKLRKLRPSFKEDGGSVTAGNASSISDG  253 (394)
T ss_pred             HHHHHHHHHHHHHhHHcCCCccceeeEEeccCCCCCceEeecCCCcC-CCCHHHHhCCCCcccCCCCcEeccccCCCCcc
Confidence            99999999999988988999999999988754443  3478899997 7899999999999987 699999999999999


Q ss_pred             cEEEEEcCHHHHHhcCCCceEEEEEEEeecCCCCcCCCChHHHHHHHHHHcCCCCCCccEEEecCCChhhhhhhhc
Q psy4157         365 AAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATSGGIANRRQE  440 (441)
Q Consensus       365 AAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~~p~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~~~~~~~  440 (441)
                      |+++||+|++.|++++.+|+++|++++.....+..+..++..+++++|+++||+++|||++|+||+|+++++.++|
T Consensus       254 aaavvl~s~~~A~~~~~~~~a~I~g~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~Did~~Ei~d~f~~~~l~~~e  329 (394)
T PLN02644        254 AAALVLVSGEKALELGLQVIAKIRGYADAAQAPELFTTAPALAIPKALKHAGLEASQVDYYEINEAFSVVALANQK  329 (394)
T ss_pred             eEEEEeccHHHHHHCCCCeEEEEEEEEEcCCCCcccchhHHHHHHHHHHHcCCCHHHCCEEEeCcHHHHHHHHHHH
Confidence            9999999999999999999899999998776665666778889999999999999999999999999999999887

>PRK07801 acetyl-CoA acetyltransferase; Provisional

Probab=100.00  E-value=2.2e-35  Score=303.31  Aligned_cols=219  Identities=34%  Similarity=0.468  Sum_probs=176.5

Q ss_pred             hhhHHhhhcCeeEEEEeecccCCCCccchhcccccccCcccccchhhhccccccc--ccchHHHHHHHHHHHhCCCHHHH
Q psy4157         210 LARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAF--HNIHMGITAENIAKKWSISRLEQ  287 (441)
Q Consensus       210 ~A~~~I~sG~advvla~G~E~ms~~P~~~~~r~g~~~g~~~~~~d~~~~g~~~~~--~~~~ma~~Ae~~a~~~Gitre~l  287 (441)
                      .|+.+|++|++|+|||+|+|+|+..|+....+.+..++........  ..+..++  .+..|...+++||++||+|||++
T Consensus        98 ~Aa~~I~sG~~d~vLv~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~~a~~~~~~yG~tre~~  175 (382)
T PRK07801         98 FAAQAVMSGTQDLVVAGGVQNMSQIPISSAMTAGEQLGFTSPFAES--KGWLHRYGDQEVSQFRGAELIAEKWGISREEM  175 (382)
T ss_pred             HHHHHHHCCCCCEEEEcchhhhcCCcccccccccccccCCcccccC--cchhhhccCCCCCHHHHHHHHHHHhCCCHHHH
Confidence            6899999999999999999999988741111111001100000000  0001111  12234446999999999999999


Q ss_pred             HHHHHHHHHHHHhhhhCCCCCccccceeeecCCCceeEeccCCCCCCCCHHHHhcCCCccccCCccccCCCCCCCCCcEE
Q psy4157         288 DEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAA  367 (441)
Q Consensus       288 d~~A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~g~~~~~~D~~~r~~~t~e~l~~~~~v~~p~G~lt~~n~~~~sDGAAA  367 (441)
                      |+||++||+||..++++|.|.++++|+.        .+..|+++| ++|+|+|+++||++++ |+||++|||+++|||+|
T Consensus       176 a~vav~~~~~a~~n~~ag~~~~~~~p~~--------~~~~d~~~~-~~t~e~~~~~~~i~~~-~pl~~~d~~~~~DGaaa  245 (382)
T PRK07801        176 ERFALESHRRAFAAIRAGRFDNEIVPVG--------GVTVDEGPR-ETSLEKMAGLKPLVEG-GRLTAAVASQISDGASA  245 (382)
T ss_pred             HHHHHHHHHHHHHHHHcCCCcccccccc--------CccccCCcC-cCCHHHHhcCCCCCCC-CCcccccCCCCCCceEE
Confidence            9999999999999888989989888885        157899999 7999999999999942 67999999999999999


Q ss_pred             EEEcCHHHHHhcCCCceEEEEEEEeecCCCCcCCCChHHHHHHHHHHcCCCCCCccEEEecCCChhhhhhhhc
Q psy4157         368 VLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATSGGIANRRQE  440 (441)
Q Consensus       368 vVLaSe~~A~~lg~~p~a~I~~~~~~~~~p~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~~~~~~~  440 (441)
                      +||+|+++|++++.+|.++|++++....++..+..++..|+++||+++||+++|||++|+||+|+++...++|
T Consensus       246 ~il~s~e~a~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~~a~~~agi~~~did~~e~~d~Fa~~~~~~~e  318 (382)
T PRK07801        246 VLLASERAVKRHGLTPRARIHHLSVRGDDPVFMLTAPIPATRYALEKTGLSIDDIDVVEINEAFAPVVLAWLK  318 (382)
T ss_pred             EEEecHHHHHHCCCCccEEEEEEEEecCChHhhccChHHHHHHHHHHcCCCHHHcCEeeecccchHHHHHHHH
Confidence            9999999999999989999999987776665567788899999999999999999999999999999999987

>PRK07851 acetyl-CoA acetyltransferase; Provisional

Probab=100.00  E-value=3.4e-35  Score=303.86  Aligned_cols=228  Identities=36%  Similarity=0.505  Sum_probs=186.7

Q ss_pred             hhhHHhhhcCeeEEEEeecccCCCCccchhccccc----ccCc-------ccccchhhhc-ccc---cccccchHHHHHH
Q psy4157         210 LARIAIKSGDATAIVAGGQECMSQAPHVINIRNGI----KLND-------AEMKDSMVFD-GLT---DAFHNIHMGITAE  274 (441)
Q Consensus       210 ~A~~~I~sG~advvla~G~E~ms~~P~~~~~r~g~----~~g~-------~~~~~d~~~~-g~~---~~~~~~~ma~~Ae  274 (441)
                      .|+.+|++|.+|+|||+|+|+|+..|.....+.+.    .+.+       .....+..+. ++.   .+.....|++.++
T Consensus        99 ~Aa~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~amg~~a~  178 (406)
T PRK07851         99 MAFHAIKAGEGDVFISAGVETVSRFAKGNSDSLPDTKNPLFAEAQARTAARAEGGAEAWHDPREDGLLPDVYIAMGQTAE  178 (406)
T ss_pred             HHHHHHHCCCCCEEEEeeEEecccCcccccccccccCchhhhhcccccccccccccccccccccccccccccccHHHHHH
Confidence            68999999999999999999998876311100000    0000       0000000011 110   1111235688999


Q ss_pred             HHHHHhCCCHHHHHHHHHHHHHHHHhhhhCCCCCccccceeeecCCCceeEeccCCCCCCCCHHHHhcCCCccccCCccc
Q psy4157         275 NIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVT  354 (441)
Q Consensus       275 ~~a~~~Gitre~ld~~A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~g~~~~~~D~~~r~~~t~e~l~~~~~v~~p~G~lt  354 (441)
                      +|+++||++|+++++|+++||++|..|++++.++.+++|+.+++  + +.+++|+++|+++|+|+|++++++++|.|+||
T Consensus       179 ~~~~~yg~~re~~~~~a~~s~~~a~~A~~n~~~a~~~~p~~~p~--~-~~~~~d~~~r~~~t~e~v~~s~~v~~P~~~lt  255 (406)
T PRK07851        179 NVAQLTGISREEQDEWGVRSQNRAEEAIANGFFEREITPVTLPD--G-TVVSTDDGPRAGTTYEKVSQLKPVFRPDGTVT  255 (406)
T ss_pred             HHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCccceeeeecCC--C-ceeCCCCCccCCcCHHHHhcCCCccCCCCcEe
Confidence            99999999999999999999999999999999999999997765  2 45788999999999999999999999999999


Q ss_pred             cCCCCCCCCCcEEEEEcCHHHHHhcCCCceEEEEEEEeecCCCCcCCCChHHHHHHHHHHcCCCCCCccEEEecCCChhh
Q psy4157         355 AGNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATSGGI  434 (441)
Q Consensus       355 ~~n~~~~sDGAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~~p~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~  434 (441)
                      ++|||+++|||+|+||+|+++|++++.+|+++|++++.....|..+..++..|+++||++|||+++|||++||||+|++.
T Consensus       256 ~~d~~~~~DGaaa~vl~s~e~A~~~~~~~~a~I~g~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~did~~ei~d~f~~~  335 (406)
T PRK07851        256 AGNACPLNDGAAAVVIMSDTKARELGLTPLARIVSTGVSGLSPEIMGLGPVEASKQALARAGMSIDDIDLVEINEAFAAQ  335 (406)
T ss_pred             cCcCCccCCceeEEEEccHHHHHHcCCCccEEEEEEEEccCCCCccchhHHHHHHHHHHHhCCCHHHCCeehhhhHHHHH
Confidence            99999999999999999999999999999999999998887777666778899999999999999999999999999999


Q ss_pred             hhhhhc
Q psy4157         435 ANRRQE  440 (441)
Q Consensus       435 ~~~~~~  440 (441)
                      ++.++|
T Consensus       336 ~l~~le  341 (406)
T PRK07851        336 VLPSAR  341 (406)
T ss_pred             HHHHHH
Confidence            998887

>PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2

Probab=100.00  E-value=7.3e-34  Score=278.15  Aligned_cols=174  Identities=52%  Similarity=0.753  Sum_probs=139.3

Q ss_pred             HHHHhccC--cchhhHHhhhcCeeEEEEeecccCCCCccchh-cccccccCcccccchhhh-cccccccccchHHHHHHH
Q psy4157         200 KRAQARNI--QPLARIAIKSGDATAIVAGGQECMSQAPHVIN-IRNGIKLNDAEMKDSMVF-DGLTDAFHNIHMGITAEN  275 (441)
Q Consensus       200 ~~a~~~gl--~~~A~~~I~sG~advvla~G~E~ms~~P~~~~-~r~g~~~g~~~~~~d~~~-~g~~~~~~~~~ma~~Ae~  275 (441)
                      +++|..|+  ..+|+..|++|++|++|++|+|+||+.|+... .+++..++. ....+..+ +++++++....|+++||+
T Consensus        85 ~~~CaSG~~Av~~a~~~I~sG~~dvvlagGvE~mS~~p~~~~~~~~~~~~g~-~~~~d~~~~~~~~~~~~~~~Mg~tAE~  163 (264)
T PF00108_consen   85 NRACASGLQAVHLAAMAIASGEADVVLAGGVESMSRVPMGLSSRRWGAPLGD-AKLEDSLLRDGLYDPYAGQPMGITAEN  163 (264)
T ss_dssp             E-GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEETTTSCEEECCTTSTSSSSG-EEEEEHHHHHTTCCTTTTSHHHHHHHH
T ss_pred             hhhhhHHHHHHHHhhhhhcCCCccEEEEecccccccccccccccccccccCc-ccccccccccccccccccccccccccc
Confidence            35565555  35799999999999999999999999999763 455555554 33334433 356677778899999999


Q ss_pred             HHHHhCCCHHHHHHHHHHHHHHHHhhhhCCCCCccccceeeecCCCc-eeEeccCCCCCCCCHHHHhcCCCccccC-Ccc
Q psy4157         276 IAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGD-VVVAKDEYPKANTTVEALQKLRPVFQKD-GTV  353 (441)
Q Consensus       276 ~a~~~Gitre~ld~~A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~g~-~~~~~D~~~r~~~t~e~l~~~~~v~~p~-G~l  353 (441)
                      ++++||||||+||+||++||+||.+|++.|+|++||+|++++.++|. .++++|+++|+.+|+|.|.+++|+|.++ |+|
T Consensus       164 ~a~~ygisRee~D~~A~~Sh~rA~~A~~~G~f~~eIvpv~~~~~~g~~~~~~~De~~r~~~~~e~l~~L~p~f~~~~G~v  243 (264)
T PF00108_consen  164 LAKKYGISREEQDEYAVRSHQRAAAAQDEGRFDDEIVPVEVPDKKGEEVTVDRDEGIRPDTTLEKLAKLKPAFRKDGGTV  243 (264)
T ss_dssp             HHHHHT--HHHHHHHHHHHHHHHHHHHHTTTTTTTBE-EEEEETTSEEEEE-S-STCGTT--HHHHHTS-BSSSTTTSS-
T ss_pred             ccccCCcCHHHHhhhhhcCHHHHHHhccccchhhheeeEeeeccccceeeeeccchhhcchhHHHHhccccccccccccc
Confidence            99999999999999999999999999999999999999999988887 7899999999999999999999999986 999


Q ss_pred             ccCCCCCCCCCcEEEEEcCHH
Q psy4157         354 TAGNASGINDGAAAVLLMSYK  374 (441)
Q Consensus       354 t~~n~~~~sDGAAAvVLaSe~  374 (441)
                      |++|+|+++||||++||+||+
T Consensus       244 Tagnss~~~DGAaa~~l~see  264 (264)
T PF00108_consen  244 TAGNSSPLNDGAAAVLLMSEE  264 (264)
T ss_dssp             BTTTB--BEEEEEEEEEEEHH
T ss_pred             ccccCCCccchhheEEEeecC
Confidence            999999999999999999986

3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 1PXT_B 1AFW_B 1WL4_A 1WL5_A 4E1L_B 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2WUA_B ....

>PRK08256 lipid-transfer protein; Provisional

Probab=99.98  E-value=7.1e-32  Score=278.15  Aligned_cols=202  Identities=18%  Similarity=0.132  Sum_probs=158.4

Q ss_pred             chhhHHhhhcCeeEEEEeecccCCCCccchh--cccccccCcccccchhhhcccc-cccccchHHHHHHHHHHHhCCCHH
Q psy4157         209 PLARIAIKSGDATAIVAGGQECMSQAPHVIN--IRNGIKLNDAEMKDSMVFDGLT-DAFHNIHMGITAENIAKKWSISRL  285 (441)
Q Consensus       209 ~~A~~~I~sG~advvla~G~E~ms~~P~~~~--~r~g~~~g~~~~~~d~~~~g~~-~~~~~~~ma~~Ae~~a~~~Gitre  285 (441)
                      .+|+.+|++|.+|+||++|+|+|+..+....  .+. ..++......+.+ .... .......|++.+++||++||+++|
T Consensus        88 ~~A~~~I~sG~~d~vLv~g~e~~s~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~a~~y~~~~G~t~e  165 (391)
T PRK08256         88 FLARQAVRSGAADCALALGFEQMQPGALGSVWDDRP-SPLERFDKALAEL-QGFDPAPPALRMFGGAGREHMEKYGTTAE  165 (391)
T ss_pred             HHHHHHHHCCCCCEEEEEEEeecccccccccccccc-chhhhhhhhhhhh-cccccCCccHHHHHHHHHHHHHHhCCCHH
Confidence            3789999999999999999999987664211  110 0010000000111 0101 011134789999999999999999


Q ss_pred             HHHHHHHHHHHHHHhhhhCCCCCccccceeeecCCCceeEeccCCCCCCCCHHHHhcCCCccccCCccccCCCCCCCCCc
Q psy4157         286 EQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGA  365 (441)
Q Consensus       286 ~ld~~A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~g~~~~~~D~~~r~~~t~e~l~~~~~v~~p~G~lt~~n~~~~sDGA  365 (441)
                      ++++||++||+||.++           |.              .++|.++|+|+|+++|++++|   ||++|||+++|||
T Consensus       166 ~~a~vav~~~~~A~~n-----------p~--------------A~~~~~~t~e~~~~s~~i~~P---l~~~d~~~~~DGA  217 (391)
T PRK08256        166 TFAKIGVKARRHAANN-----------PY--------------AQFRDEYTLEDVLASPMIWGP---LTRLQCCPPTCGA  217 (391)
T ss_pred             HHHHHHHHHHHhhhcC-----------Ch--------------hhcCCCCCHHHHhcCCcccCC---CcHhhcCCCCCCe
Confidence            9999999999999753           21              345667999999999999988   9999999999999


Q ss_pred             EEEEEcCHHHHHhcCCCceEEEEEEEeecCCCCcCCC----------ChHHHHHHHHHHcCCCCCCccEEEecCCChhhh
Q psy4157         366 AAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGT----------GPIPAVNAVLAKAGWSKEEVGYFNRVATSGGIA  435 (441)
Q Consensus       366 AAvVLaSe~~A~~lg~~p~a~I~~~~~~~~~p~~~~~----------~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~~  435 (441)
                      +||||+|+++|++++++|.++|++++..+.+|..+..          +++.|++++|+++|++++|||++||||||++.+
T Consensus       218 aA~il~s~~~a~~~~~~~~v~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~ag~~~~DiD~~ei~d~f~~~~  297 (391)
T PRK08256        218 AAAIVCSEEFARKHGLDRAVEIVAQAMTTDTPSTFDGRSMIDLVGYDMTRAAAQQVYEQAGIGPEDIDVVELHDCFSANE  297 (391)
T ss_pred             EEEEEecHHHHHhcCCCCCEEEEEEEEeccccccccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEeeccCCcHHH
Confidence            9999999999999998888999999987766544321          246899999999999999999999999999999


Q ss_pred             hhhhc
Q psy4157         436 NRRQE  440 (441)
Q Consensus       436 ~~~~~  440 (441)
                      +.++|
T Consensus       298 l~~le  302 (391)
T PRK08256        298 LLTYE  302 (391)
T ss_pred             HHHHH
Confidence            99988

>PRK06157 acetyl-CoA acetyltransferase; Validated

Probab=99.97  E-value=1.2e-31  Score=276.90  Aligned_cols=194  Identities=19%  Similarity=0.146  Sum_probs=155.4

Q ss_pred             chhhHHhhhcCeeEEEEeecccCCCCccch-hcccccccCcccccchhhhcccccccccchHHHHHHHHHHHhCCCHHHH
Q psy4157         209 PLARIAIKSGDATAIVAGGQECMSQAPHVI-NIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQ  287 (441)
Q Consensus       209 ~~A~~~I~sG~advvla~G~E~ms~~P~~~-~~r~g~~~g~~~~~~d~~~~g~~~~~~~~~ma~~Ae~~a~~~Gitre~l  287 (441)
                      .+|+.+|++|++|++|++|+|+|+..|+.. ....   .+.  .+ +....++.   .+..|++.+++||++||+++|++
T Consensus        96 ~~A~~~I~sG~~d~vlv~G~e~~s~~~~~~~~~~~---~~~--~~-~~~~~~~~---~~~~~al~a~~~~~~yG~t~e~~  166 (398)
T PRK06157         96 RGAVYAVASGAYDIALALGVEKLKDTGYGGLPVAN---PGT--LA-DMTMPNVT---APGNFAQLASAYAAKYGVSREDL  166 (398)
T ss_pred             HHHHHHHHCCCCCEEEEEEEeecccCccccccccc---ccc--ch-hcccccCc---hHHHHHHHHHHHHHHhCCCHHHH
Confidence            379999999999999999999999877521 1000   000  00 00000111   12468999999999999999999


Q ss_pred             ----HHHHHHHHHHHHhhhhCCCCCccccceeeecCCCceeEeccCCCCCCCCHHHHhcCCCccccCCccccCCCCCCCC
Q psy4157         288 ----DEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGIND  363 (441)
Q Consensus       288 ----d~~A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~g~~~~~~D~~~r~~~t~e~l~~~~~v~~p~G~lt~~n~~~~sD  363 (441)
                          ++|+++||+||.++           |              |+++|+++|+|+|+++||+++|   +++.|||+++|
T Consensus       167 ~~~~a~vav~~~~~A~~n-----------p--------------~A~~r~~~t~e~v~~s~~v~~P---l~~~d~~~~~D  218 (398)
T PRK06157        167 KRAMAHVSVKSHANGARN-----------P--------------KAHLRKAVTEEQVLKAPMIAGP---LGLFDCCGVSD  218 (398)
T ss_pred             cccccHHHHHHHHHHhcC-----------C--------------hhhcCCCCCHHHHhcCCcccCC---CchhccCCCCC
Confidence                79999999999742           2              3677888999999999999988   99999999999


Q ss_pred             CcEEEEEcCHHHHHhcCCCceEEEEEEEeecC----------CCCcCCCChHHHHHHHHHHcCCC--CCCccEEEecCCC
Q psy4157         364 GAAAVLLMSYKTAQARNIQPLARIVAMSSAGV----------EPTLMGTGPIPAVNAVLAKAGWS--KEEVGYFNRVATS  431 (441)
Q Consensus       364 GAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~----------~p~~~~~~~~~Aa~~al~~AGl~--~~DID~~Ei~D~F  431 (441)
                      ||+|+||+|+++|++++.+|.++|++++....          ++..++ .++.|++++|++|||+  ++|||++||||+|
T Consensus       219 GAaA~vl~s~~~A~~l~~~~~v~I~g~~~~~~~~~~~~~~~~~~~~~~-~~~~aa~~a~~~AGl~~~~~Did~~Ei~D~F  297 (398)
T PRK06157        219 GAAAAIVTTPEIARALGKKDPVYVKALQLAVSNGWELQYNGWDGSYFP-TTRIAARKAYREAGITDPREELSMAEVHDCF  297 (398)
T ss_pred             ccEEEEEecHHHHHhhCCCCCeEEEEEEEecccccccccccccccccH-HHHHHHHHHHHHcCCCCchhcCCEEEEecCC
Confidence            99999999999999999867799999987632          222222 3568999999999998  7999999999999


Q ss_pred             hhhhhhhhc
Q psy4157         432 GGIANRRQE  440 (441)
Q Consensus       432 t~~~~~~~~  440 (441)
                      +++++.++|
T Consensus       298 s~~~l~~~e  306 (398)
T PRK06157        298 SITELVTME  306 (398)
T ss_pred             hHHHHHHHH
Confidence            999999987

>PRK06066 acetyl-CoA acetyltransferase; Provisional

Probab=99.97  E-value=1.4e-31  Score=274.43  Aligned_cols=194  Identities=18%  Similarity=0.111  Sum_probs=152.8

Q ss_pred             hhhHHhhhcCeeEEEEeecccCCCCccchhcccccccCcccccchhhhcccccccccc-hHHHHHHHHHHHhCCCHHHHH
Q psy4157         210 LARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNI-HMGITAENIAKKWSISRLEQD  288 (441)
Q Consensus       210 ~A~~~I~sG~advvla~G~E~ms~~P~~~~~r~g~~~g~~~~~~d~~~~g~~~~~~~~-~ma~~Ae~~a~~~Gitre~ld  288 (441)
                      .|+.+|++|.+|+|||+|.|+|+....... ..+. ..+ ..+..+  .++   ..+. .|++.+++||++||+++|+++
T Consensus        94 ~A~~aV~sG~~d~vLv~g~~~~~~~~~~~~-~~~~-~~~-~~~~~p--~g~---~~p~~~~al~a~rym~~yG~t~E~lA  165 (385)
T PRK06066         94 HAVMHINSGLANVVVVEAHSKPSDILTFSD-VVKF-AMD-PIYVRP--IGP---PNPHFIAGLDAVKFMSRKGITREDLA  165 (385)
T ss_pred             HHHHHHHcCCCCEEEEEEEeeccCccchhh-hhhc-ccC-cceecc--cCC---CcHHHHHHHHHHHHHHHHCcCHHHHH
Confidence            689999999999999999999876322110 0000 000 000000  021   1222 569999999999999999999


Q ss_pred             HHHHHHHHHHHhhhhCCCCCccccceeeecCCCceeEeccCCCCCCCCHHHHhcCCCccccCCccccCCCCCCCCCcEEE
Q psy4157         289 EYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAV  368 (441)
Q Consensus       289 ~~A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~g~~~~~~D~~~r~~~t~e~l~~~~~v~~p~G~lt~~n~~~~sDGAAAv  368 (441)
                      +|++++|.||..+           |.              +++|+++|+|+|+++++|.+|   ||++|||+++|||+||
T Consensus       166 ~Vavk~r~nA~~N-----------P~--------------A~~r~~~t~edvl~S~~ia~P---l~~~d~~~~~DGAaAv  217 (385)
T PRK06066        166 LVVEKNKKAGLSN-----------PR--------------ASYASNISLEDVLSSEYVVYP---LTELDIAPFVDGAIVV  217 (385)
T ss_pred             HHHHHHHHHHhcC-----------Ch--------------hhcCCCCCHHHHhcCCcccCC---chhhccCCCCCceEEE
Confidence            9999999999742           32              466778999999999999998   9999999999999999


Q ss_pred             EEcCHHHHHhcCCCceEEEEEEEeec----CCCCcCCCChH--HHHHHHHHHcCCC--CCCccEEEecCCChhhhhhhhc
Q psy4157         369 LLMSYKTAQARNIQPLARIVAMSSAG----VEPTLMGTGPI--PAVNAVLAKAGWS--KEEVGYFNRVATSGGIANRRQE  440 (441)
Q Consensus       369 VLaSe~~A~~lg~~p~a~I~~~~~~~----~~p~~~~~~~~--~Aa~~al~~AGl~--~~DID~~Ei~D~Ft~~~~~~~~  440 (441)
                      ||+|+++|++++.+|. +|++++...    ..+..+...+.  .|+++||++|||+  ++|||++||||||+++++.++|
T Consensus       218 vl~s~~~a~~l~~~pv-~I~g~g~~~~~~~~~~~~~~~~~~~~~Aa~~a~~~AGi~~p~~DiD~~ei~D~Ft~~~l~~~e  296 (385)
T PRK06066        218 VLASEEVAKKLTDDPV-WIKGIGWSTESSNLETAELGKANYMRIAADMAYKMAGIESPRKEVDAAEVDDRYSYKELQHIE  296 (385)
T ss_pred             EEeCHHHHHhcCCCCE-EEEEEEEecCCcccccccccccHHHHHHHHHHHHHcCCCCCHHHCcEEEEecCChHHHHHHHH
Confidence            9999999999998885 999888643    23434444443  7999999999998  7999999999999999999988

>PRK08242 acetyl-CoA acetyltransferase; Validated

Probab=99.97  E-value=1.9e-31  Score=274.97  Aligned_cols=250  Identities=28%  Similarity=0.367  Sum_probs=171.7

Q ss_pred             ccCCCchHhhHHHHHHHhCCCHHHHhHHHHhcHHHHHHHHhCCCCCcceeeeEeccCCCceeeeccCCCCCCccHHHhhh
Q psy4157          33 AFHNIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTSVDALQK  112 (441)
Q Consensus        33 ~~~~~~mg~~ae~~a~~~~isRe~~D~~a~~s~~ra~~a~~~g~~~~ei~p~~~~~~~g~~~~~~de~~~~~~~~~~l~~  112 (441)
                      ++...+||++||++|++||||||+||+||++||+||.+|+++|+|++||+||+  +++|..+++.||++|+++|+|+|++
T Consensus       142 ~~~~~~mg~~Ae~~a~~~gisRe~~d~~A~~Sh~~A~~A~~~g~f~~ei~pv~--~~~~~~~~~~de~~r~~~t~e~l~~  219 (402)
T PRK08242        142 PTYFVPQGISADLIATKYGFSREDVDAYAVESQQRAAAAWAEGYFAKSVVPVK--DQNGLTILDHDEHMRPGTTMESLAK  219 (402)
T ss_pred             ccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeee--cCCCCEeeCCCCCCCCCCCHHHHhC
Confidence            44456899999999999999999999999999999999999999999999998  4566667899999999999999999


Q ss_pred             cCcccccCCceecCCCCCCCCccccchhhhhcccCceeeecccCCCCCCCHHHHhcCCCccCCCCcccCCCCCCccccch
Q psy4157         113 LRPVFQKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAA  192 (441)
Q Consensus       113 l~p~f~~~g~~t~~~~~~~~dg~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~p~~~~~g~vtagn~s~~~Dgaa  192 (441)
                      |||+|.+.|+.         ||                          .+.+.+.+++.+-.-..+||++|+|+++|||+
T Consensus       220 l~p~f~~~~~~---------~g--------------------------~~~~~~~~~~~~~~~~~~vTagn~s~~~DGAa  264 (402)
T PRK08242        220 LKPSFAMMGEM---------GG--------------------------FDAVALQKYPEVERINHVHHAGNSSGIVDGAA  264 (402)
T ss_pred             CCCCccCcccc---------Cc--------------------------ccccccccccccccccCceecCcCCCCCCceE
Confidence            99999875520         00                          00011111111111123699999999999999


Q ss_pred             hhhhhhHHHHHhccCcchhhHHhhhcCeeEEEEeecccCCCCccchhcccccccCcccccchhhhcccccccccchHHHH
Q psy4157         193 AVLLMSYKRAQARNIQPLARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGIT  272 (441)
Q Consensus       193 ~~ll~s~~~a~~~gl~~~A~~~I~sG~advvla~G~E~ms~~P~~~~~r~g~~~g~~~~~~d~~~~g~~~~~~~~~ma~~  272 (441)
                      ++||+++++++++|+.+.++.  . |       .+.  -+..|...                           .......
T Consensus       265 Alvl~s~e~A~~~g~~p~a~I--~-g-------~~~--~~~~~~~~---------------------------~~~~~~a  305 (402)
T PRK08242        265 AVLIGSEEAGKALGLKPRARI--V-A-------TAT--IGSDPTIM---------------------------LTGPVPA  305 (402)
T ss_pred             EEEEecHHHHHHcCCCCcEEE--E-E-------EEE--ecCCchhh---------------------------cccHHHH
Confidence            999999999999998776532  1 1       000  01111100                           0011236


Q ss_pred             HHHHHHHhCCCHHHHHHH----HHHHHHHHHhhhhCCCCCccccceeeecCCCceeEeccCCCCCCCCHHHHhcCCCccc
Q psy4157         273 AENIAKKWSISRLEQDEY----AYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQ  348 (441)
Q Consensus       273 Ae~~a~~~Gitre~ld~~----A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~g~~~~~~D~~~r~~~t~e~l~~~~~v~~  348 (441)
                      +++.+++.|++.+|+|.|    ++..+..+.. ...|. .    +..+|..+|.+.+   .||...+....+..+-..++
T Consensus       306 ~~~al~~AGl~~~DID~~ei~daFa~~~l~~~-e~lG~-~----~~~vN~~GG~la~---GHP~GAsG~~~~~~l~~~L~  376 (402)
T PRK08242        306 TRKALAKAGLTVDDIDLFELNEAFASVVLRFM-QALDI-P----HDKVNVNGGAIAM---GHPLGATGAMILGTVLDELE  376 (402)
T ss_pred             HHHHHHHcCCCHHHCCEEEecchhhHHHHHHH-HHhCC-C----CcCCCcCCCHHhc---CCcHHHHHHHHHHHHHHHHH
Confidence            688899999999999877    6666555531 22343 2    2235667776655   67777777776655544443


Q ss_pred             c-C---CccccCCCCCCCCCcEEEEE
Q psy4157         349 K-D---GTVTAGNASGINDGAAAVLL  370 (441)
Q Consensus       349 p-~---G~lt~~n~~~~sDGAAAvVL  370 (441)
                      . +   |..++|.....   +.|+||
T Consensus       377 ~~~~~~g~~~~c~ggG~---g~a~~~  399 (402)
T PRK08242        377 RRGKRTALITLCVGGGM---GIATII  399 (402)
T ss_pred             hcCCCeEEEEEcccCCc---eeEEEE
Confidence            2 2   56666665554   445554

>PRK06065 acetyl-CoA acetyltransferase; Provisional

Probab=99.97  E-value=6.4e-31  Score=270.61  Aligned_cols=194  Identities=16%  Similarity=0.067  Sum_probs=151.9

Q ss_pred             hhhHHhhhcCeeEEEEeecccCCCCccchhcccccccCcccccchhhhc-ccccccccchHHHHHHHHHHHhCCCHHHHH
Q psy4157         210 LARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFD-GLTDAFHNIHMGITAENIAKKWSISRLEQD  288 (441)
Q Consensus       210 ~A~~~I~sG~advvla~G~E~ms~~P~~~~~r~g~~~g~~~~~~d~~~~-g~~~~~~~~~ma~~Ae~~a~~~Gitre~ld  288 (441)
                      .|+.+|++|.+|+||++|.|+|+...........       ...+..+. ++ .+..+..|++.+++||++||+++|+++
T Consensus       100 ~A~~~I~sG~ad~vLVvg~e~~~~~~~~~~~~~~-------~~~~~~~~~p~-g~~~~~~~Al~a~rym~~yG~~~e~lA  171 (392)
T PRK06065        100 AGWYHVASGLCQKVLAVAEEKMSPARPHPQAVFR-------YIWDPILEKPL-NPNLIWIFAMEMHRYMATYGIKKEEIA  171 (392)
T ss_pred             HHHHHHhCCCCCEEEEEEeecccccccchhHHHh-------hhccchhccCC-CccHHHHHHHHHHHHHHHHCcCHHHHH
Confidence            6899999999999999999998653111100000       00011111 11 112234689999999999999999999


Q ss_pred             HHHHHHHHHHHhhhhCCCCCccccceeeecCCCceeEeccCCCCCCCCHHHHhcCCCccccCCccccCCCCCCCCCcEEE
Q psy4157         289 EYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAV  368 (441)
Q Consensus       289 ~~A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~g~~~~~~D~~~r~~~t~e~l~~~~~v~~p~G~lt~~n~~~~sDGAAAv  368 (441)
                      +|++++|+||..+           |.              +++|+++|+|+++++|+|.+|   +|+++||+++|||+|+
T Consensus       172 ~vav~~~~~A~~N-----------P~--------------A~~r~~lt~e~vl~s~~ia~P---l~l~d~~~~~DGAaA~  223 (392)
T PRK06065        172 LVSVKNKRNALNN-----------PY--------------AQLGSKITVEDVLKSEVLVWP---VQLLDVSPVSDGAAAI  223 (392)
T ss_pred             HHHHHHHHhhccC-----------ch--------------hhhcCCCCHHHHhcCCcccCC---CchhhcCCCCCceEEE
Confidence            9999999999742           32              466778999999999999998   9999999999999999


Q ss_pred             EEcCHHHHHhcCCCceEEEEEEEeecCCC------CcCCCChHHHHHHHHHHcCCCC--CCccEEEecCCChhhhhhhhc
Q psy4157         369 LLMSYKTAQARNIQPLARIVAMSSAGVEP------TLMGTGPIPAVNAVLAKAGWSK--EEVGYFNRVATSGGIANRRQE  440 (441)
Q Consensus       369 VLaSe~~A~~lg~~p~a~I~~~~~~~~~p------~~~~~~~~~Aa~~al~~AGl~~--~DID~~Ei~D~Ft~~~~~~~~  440 (441)
                      ||+|+++|++++.+| ++|.+++......      .....+++.|++++|+++|+++  +|||++||||||+++.+.++|
T Consensus       224 vl~s~e~A~~l~~~~-v~I~g~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~aGi~~p~~diD~~ei~D~Fs~~~l~~~E  302 (392)
T PRK06065        224 VLASEDLARRYTDTP-VWVEGVGWTLDNTEWPNRDLAYPRYVEFAARMAYKMAGIERPRKEIDVAEPYDPFDYKELHHLE  302 (392)
T ss_pred             EEeCHHHHHhcCCCC-EEEEEEEEecCccccccccccccHHHHHHHHHHHHHcCCCCchhhCcEEEecCCChHHHHHHHH
Confidence            999999999999777 6799988753211      1223345789999999999985  999999999999999999998

>PRK06289 acetyl-CoA acetyltransferase; Provisional

Probab=99.97  E-value=3.6e-31  Score=273.95  Aligned_cols=201  Identities=14%  Similarity=0.126  Sum_probs=153.9

Q ss_pred             chhhHHhhhcCeeEEEEeecccCCCCccchh-cccccccCcccccchhhhcccccccc-cchHHHHHHHHHHHhCCCHHH
Q psy4157         209 PLARIAIKSGDATAIVAGGQECMSQAPHVIN-IRNGIKLNDAEMKDSMVFDGLTDAFH-NIHMGITAENIAKKWSISRLE  286 (441)
Q Consensus       209 ~~A~~~I~sG~advvla~G~E~ms~~P~~~~-~r~g~~~g~~~~~~d~~~~g~~~~~~-~~~ma~~Ae~~a~~~Gitre~  286 (441)
                      ..|+.+|.+|++++||++|+|+|+..|.... ...+    . ..+.+.  .++..++. +..|++.+++||++||++||+
T Consensus        98 ~~Aa~~I~sG~~~~VLvvg~e~~s~~~~~~~~~~~~----~-~~~~~~--~~~~~~~~~~~~~al~a~~y~~~yG~t~e~  170 (403)
T PRK06289         98 LAAMADLRAGRYDVALVVGVELMKTVPGDVAAEHLG----A-AAWTGH--EGQDARFPWPSMFARVADEYDRRYGLDEEH  170 (403)
T ss_pred             HHHHHHHHcCCCCEEEEEEEEecCCCCchhhHHhhh----c-cccccc--ccccCCCccHHHHHHHHHHHHHHhCCCHHH
Confidence            3789999999999999999999998764321 0110    0 001110  01111111 345899999999999999999


Q ss_pred             HHHHHHHHHHHHHhhhhCCCCCccccceeeecCCCceeEeccCCCCCCCCHHHHhcCCCccccCCccccCCCCCCCCCcE
Q psy4157         287 QDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAA  366 (441)
Q Consensus       287 ld~~A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~g~~~~~~D~~~r~~~t~e~l~~~~~v~~p~G~lt~~n~~~~sDGAA  366 (441)
                      +++||++||+||.+ ++..+++.++.                   .++++.|++..+|++.+|   ||++|||+++||||
T Consensus       171 la~va~~~~~~A~~-NP~A~~~~~~~-------------------~~~~~~~d~~~s~~i~~P---l~~~d~~~~~DGAa  227 (403)
T PRK06289        171 LRAIAEINFANARR-NPNAQTRGWAF-------------------PDEATNDDDATNPVVEGR---LRRQDCSQVTDGGA  227 (403)
T ss_pred             HHHHHHHHHHHHcc-CcHhhcCcccc-------------------ccccchhhhhcCCcccCC---CchhhcCCCCCcee
Confidence            99999999999975 33334432211                   024688899999999877   99999999999999


Q ss_pred             EEEEcCHHHHHhcCC-CceEEEEEEEeecCC-------------CCcCCCChHHHHHHHHHHcCCCCCCccEEEecCCCh
Q psy4157         367 AVLLMSYKTAQARNI-QPLARIVAMSSAGVE-------------PTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATSG  432 (441)
Q Consensus       367 AvVLaSe~~A~~lg~-~p~a~I~~~~~~~~~-------------p~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft  432 (441)
                      |+||+|+++|++++. +|.++|++++..+..             +..+ ..+..|+++||++|||+++|||++||||||+
T Consensus       228 A~vl~s~e~a~~l~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~aa~~a~~~Agi~~~Didv~el~D~fa  306 (403)
T PRK06289        228 GVVLASDAYLRDYADARPIPRIKGWGHRTAPLGLEQKLDRSAGDPYVL-PHVRQAVLDAYRRAGVGLDDLDGFEVHDCFT  306 (403)
T ss_pred             EEEEEcHHHHHHhccCCCCEEEEEEEEecccccccccccccccccccc-HHHHHHHHHHHHHcCCCHHHCeEEeeeccch
Confidence            999999999999986 677999999976332             2222 2356899999999999999999999999999


Q ss_pred             hhhhhhhc
Q psy4157         433 GIANRRQE  440 (441)
Q Consensus       433 ~~~~~~~~  440 (441)
                      ++.+.++|
T Consensus       307 ~~~l~~le  314 (403)
T PRK06289        307 PSEYLAID  314 (403)
T ss_pred             HHHHHHHH
Confidence            99999988

>PRK06365 acetyl-CoA acetyltransferase; Provisional

Probab=99.97  E-value=1.4e-30  Score=271.24  Aligned_cols=196  Identities=18%  Similarity=0.114  Sum_probs=149.8

Q ss_pred             chhhHHhhhcCeeEEEEeecccCCCCccchhcccccccCcccccchhhhc-ccccccccchHHHHHHHHHHHhCCCHHHH
Q psy4157         209 PLARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFD-GLTDAFHNIHMGITAENIAKKWSISRLEQ  287 (441)
Q Consensus       209 ~~A~~~I~sG~advvla~G~E~ms~~P~~~~~r~g~~~g~~~~~~d~~~~-g~~~~~~~~~ma~~Ae~~a~~~Gitre~l  287 (441)
                      ..|+.+|++|.+++|||+|+|+|+..|........ ...     .+..+. ++.. ..+..|++.+++||++||+|+|++
T Consensus       107 ~~A~~~I~sG~~~~vLv~G~e~~s~~~~~~~~~~~-~~~-----~d~~~~~~~g~-~~~~~~al~a~ry~~~yG~t~e~l  179 (430)
T PRK06365        107 QAGYEEIASGRMDCVAVYGFETMSHVNTWKGNEFI-ALA-----SDTNFDYPLGG-FYTGYYAMMAVRHMYEFGTTVEQL  179 (430)
T ss_pred             HHHHHHHHcCCCCEEEEEEeeecccccchhhhhhh-ccc-----ccccccccccC-ccHHHHHHHHHHHHHHHCCCHHHH
Confidence            37999999999999999999999987742110000 000     011111 1111 112458999999999999999999


Q ss_pred             HHHHHHHHHHHHhhhhCCCCCccccceeeecCCCceeEeccCCCCCCCCHHHHhcCCCccccCCccccCCCCCCCCCcEE
Q psy4157         288 DEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAA  367 (441)
Q Consensus       288 d~~A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~g~~~~~~D~~~r~~~t~e~l~~~~~v~~p~G~lt~~n~~~~sDGAAA  367 (441)
                      ++|+++||+||.++           |.              ++.|.++|+|+|+++|+|++|   ||++|||+++|||+|
T Consensus       180 a~vav~~~~~A~~N-----------P~--------------A~~~~~~t~e~v~~s~~i~~P---lt~~d~~~~sDGAaA  231 (430)
T PRK06365        180 AKVSVKNHGNAIHN-----------PF--------------AQSPMKITVEDVRKSPMVSYP---LTRLDVCAMSDGAAC  231 (430)
T ss_pred             HHHHHHHHHHHhhC-----------cH--------------hhcCCCCCHHHHhcCCccccC---cchhhcCCcCCceEE
Confidence            99999999999752           22              344667899999999999987   999999999999999


Q ss_pred             EEEcCHHHHHhcCCCceEEEEEE--EeecCCCCcCCC--------------------------ChHHHHHHHHHHcCCC-
Q psy4157         368 VLLMSYKTAQARNIQPLARIVAM--SSAGVEPTLMGT--------------------------GPIPAVNAVLAKAGWS-  418 (441)
Q Consensus       368 vVLaSe~~A~~lg~~p~a~I~~~--~~~~~~p~~~~~--------------------------~~~~Aa~~al~~AGl~-  418 (441)
                      +||+|+++|++++.+|+ +|.++  +..+.++..+..                          ....|+++||+++||+ 
T Consensus       232 vvl~See~A~~l~~~pv-~i~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~AGl~~  310 (430)
T PRK06365        232 AILASEDKAFEITDKPV-LIKAIGTGSDTLRLADRPFGEVPLLPNESPDDYKDLRYPGVHSFRAGRMAAKEAYEMAGITD  310 (430)
T ss_pred             EEEecHHHHHhcCCCCe-EEEEEEEeccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcCCCC
Confidence            99999999999998884 45444  433333322111                          1247999999999998 


Q ss_pred             -CCCccEEEecCCChhhhhhhhc
Q psy4157         419 -KEEVGYFNRVATSGGIANRRQE  440 (441)
Q Consensus       419 -~~DID~~Ei~D~Ft~~~~~~~~  440 (441)
                       ++|||++||||||+++++.++|
T Consensus       311 ~~~DiD~~Ei~D~Fa~~~l~~lE  333 (430)
T PRK06365        311 PLNDLDLIELHDAYTSSEIQTYE  333 (430)
T ss_pred             CHHHCCEEEeecCCcHHHHHHHH
Confidence             8999999999999999999987

>PRK08142 acetyl-CoA acetyltransferase; Provisional

Probab=99.97  E-value=1.7e-30  Score=267.11  Aligned_cols=196  Identities=14%  Similarity=0.085  Sum_probs=154.8

Q ss_pred             chhhHHhhhcCeeEEEEeecccCCCCccchh--cccccccCcccccchhhhc-ccccccccchHHHHHHHHHHHhCCCHH
Q psy4157         209 PLARIAIKSGDATAIVAGGQECMSQAPHVIN--IRNGIKLNDAEMKDSMVFD-GLTDAFHNIHMGITAENIAKKWSISRL  285 (441)
Q Consensus       209 ~~A~~~I~sG~advvla~G~E~ms~~P~~~~--~r~g~~~g~~~~~~d~~~~-g~~~~~~~~~ma~~Ae~~a~~~Gitre  285 (441)
                      ..|+.+|++|.+|+|||+|.|+|........  ..+.....+    .++..+ ++   ..+..|++.+++||++||+++|
T Consensus        90 ~~A~~~I~sG~~d~vLvvg~e~~~~~~~~~~~~~~~~~~~~~----~~~~~~~g~---~~~~~~Al~a~~ym~~yG~t~e  162 (388)
T PRK08142         90 GHAAQAIAAGKCSVALITLAGRPRSEGSSGTEPRNWGADAPD----APFEAPYGP---TTHNLYAMCAMRHMHEYGTTSE  162 (388)
T ss_pred             HHHHHHHHcCCCCEEEEEeeeecccCCccccccccccccccc----cchhccccc---ccHHHHHHHHHHHHHHHCcCHH
Confidence            3689999999999999999999864321100  011100000    011111 22   2245789999999999999999


Q ss_pred             HHHHHHHHHHHHHHhhhhCCCCCccccceeeecCCCceeEeccCCCCCCCCHHHHhcCCCccccCCccccCCCCCCCCCc
Q psy4157         286 EQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGA  365 (441)
Q Consensus       286 ~ld~~A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~g~~~~~~D~~~r~~~t~e~l~~~~~v~~p~G~lt~~n~~~~sDGA  365 (441)
                      ++++|++++|+||..+           |.              +++|+++|+|+|+++|+|.+|   +|+++||+++|||
T Consensus       163 ~la~vav~~~~~A~~N-----------P~--------------A~~r~~~t~e~vl~s~~Ia~P---l~l~d~~~~~DGA  214 (388)
T PRK08142        163 QLAWIKVAASHHAQHN-----------PH--------------AMLRDVVTVEDVLNSPMIADP---LHRLDCCVVTDGG  214 (388)
T ss_pred             HHHHHHHHHHHHhccC-----------Ch--------------hhcCCCCCHHHHhcCCcccCC---chhhccCcccCce
Confidence            9999999999999742           32              466778999999999999999   9999999999999


Q ss_pred             EEEEEcCHHHHHhcCCCceEEEEEEEeecC-----CCCcCCCChHHHHHHHHHHcCCCCCCccEEEecCCChhhhhhhhc
Q psy4157         366 AAVLLMSYKTAQARNIQPLARIVAMSSAGV-----EPTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATSGGIANRRQE  440 (441)
Q Consensus       366 AAvVLaSe~~A~~lg~~p~a~I~~~~~~~~-----~p~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~~~~~~~  440 (441)
                      +|+||+|+++|++++. |.++|.+++....     .++....++..|++++|++||++++|||++||||||+++++.++|
T Consensus       215 aA~vl~s~~~A~~l~~-~~v~I~g~~~~~~~~~~~~~~~~~~~~~~aa~~a~~~AGi~~~did~~elyD~Fs~~~~~~~E  293 (388)
T PRK08142        215 GALVVVRPEIARSLKR-PLVKVLGAGEAIKGQMGGKVDLTYSGAAWSGPAAFAEAGVTPADIKYASIYDSFTITVLMQLE  293 (388)
T ss_pred             EEEEEecHHHHhhcCC-CCEEEEEEEEecCCccccCcccccHHHHHHHHHHHHHcCCCHHHCCEEEEeccchHHHHHHHH
Confidence            9999999999999974 5589999987632     333344456789999999999999999999999999999999988

>PRK07937 lipid-transfer protein; Provisional

Probab=99.97  E-value=2.8e-30  Score=262.23  Aligned_cols=189  Identities=19%  Similarity=0.090  Sum_probs=150.5

Q ss_pred             hhhHHhhhcCeeEEEEeecccCCCCccchhcccccccCcccccchhhhc-ccccccccchHHHHHHHHHHHhCCCHHHHH
Q psy4157         210 LARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFD-GLTDAFHNIHMGITAENIAKKWSISRLEQD  288 (441)
Q Consensus       210 ~A~~~I~sG~advvla~G~E~ms~~P~~~~~r~g~~~g~~~~~~d~~~~-g~~~~~~~~~ma~~Ae~~a~~~Gitre~ld  288 (441)
                      .|+.+|++|.+|+||++|.|+|+.......      +..   ..+..+. ++ ....+..|++.+++||++||+|+|+++
T Consensus        92 ~A~~aI~sG~~d~VLv~g~~k~~~~~~~~~------~~~---~~~~~~~~p~-G~~~~~~~Al~a~~ym~~yG~t~e~lA  161 (352)
T PRK07937         92 EAWVKLLTGEVDTALVYGFGKSSAGTLRRV------LAL---QLDPYTVAPL-WPDSVSMAGLQARAGLDAGKWTEEQMA  161 (352)
T ss_pred             HHHHHHhcCCCCEEEEEEecccCccchhhh------hhc---cCCcceeccC-CCchHHHHHHHHHHHHHHhCCCHHHHH
Confidence            689999999999999999999864221100      000   0011111 11 011245789999999999999999999


Q ss_pred             HHHHHHHHHHHhhhhCCCCCccccceeeecCCCceeEeccCCCCCCCCHHHHhcCCCccccCCccccCCCCCCCCCcEEE
Q psy4157         289 EYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAV  368 (441)
Q Consensus       289 ~~A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~g~~~~~~D~~~r~~~t~e~l~~~~~v~~p~G~lt~~n~~~~sDGAAAv  368 (441)
                      +|++++|+||..+           |.              .++|  +|+|+++++|+|.+|   ||++|||+++|||+|+
T Consensus       162 ~vavk~r~nA~~N-----------P~--------------A~~r--it~edvl~s~~ia~P---L~l~d~~~~~DGAaA~  211 (352)
T PRK07937        162 EVAARSRADARRN-----------PS--------------AEPS--ISVDELLARPYFADP---LRRHDIAPITDGAAAV  211 (352)
T ss_pred             HHHHHHHHHHhhC-----------ch--------------hhcc--CCHHHHhcCCcccCC---chhhcCCCCCCcceEE
Confidence            9999999999742           32              4666  899999999999998   9999999999999999


Q ss_pred             EEcCHHHHHhcCCCceEEEEEEEeecCCCCcCC---CChHHHHHHHHHHc-CCCCCCccEEEecCCChhhhhhhhc
Q psy4157         369 LLMSYKTAQARNIQPLARIVAMSSAGVEPTLMG---TGPIPAVNAVLAKA-GWSKEEVGYFNRVATSGGIANRRQE  440 (441)
Q Consensus       369 VLaSe~~A~~lg~~p~a~I~~~~~~~~~p~~~~---~~~~~Aa~~al~~A-Gl~~~DID~~Ei~D~Ft~~~~~~~~  440 (441)
                      ||+|+++|++++.+| ++|.+++.....+ .+.   ..+..+++++++++ |++++|||++||||||+++++.++|
T Consensus       212 vl~s~~~A~~l~~~p-v~I~g~~~~~~~~-~~~~~d~~~~~~~~~a~~~aAgi~~~diD~~Ei~D~F~~~~l~~~e  285 (352)
T PRK07937        212 VLAAGDRARELRERP-AWITGIEHRIESP-SLGARDLTRSPSTALAAEAATGGDAGGVDVAELHAPFTHQELILRE  285 (352)
T ss_pred             EEecHHHHHHcCCCc-EEEEEEEEeeCCc-cccccccccHHHHHHHHHHhcCCCHHHCCEEEEeCCChHHHHHHHH
Confidence            999999999999878 9999998864332 222   44567778888886 9999999999999999999999988

>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism

Probab=99.97  E-value=2.6e-30  Score=264.62  Aligned_cols=198  Identities=19%  Similarity=0.125  Sum_probs=158.2

Q ss_pred             chhhHHhhhcCeeEEEEeecccCCCCccchhcccccccCcccccchhhhcccccccccchHHHHHHHHHHHhCCCHHHHH
Q psy4157         209 PLARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQD  288 (441)
Q Consensus       209 ~~A~~~I~sG~advvla~G~E~ms~~P~~~~~r~g~~~g~~~~~~d~~~~g~~~~~~~~~ma~~Ae~~a~~~Gitre~ld  288 (441)
                      .+|+.+|.+|.++++|++|.|+|+..|.....  .....+ ..+ ..... .........|++.+++||++||+|+|+++
T Consensus        85 ~~Aa~~I~sG~~~~vlv~g~e~~s~~~~~~~~--~~~~~~-~~~-~~~~~-~~~~~~~~~~al~a~~~~~~~g~t~e~~~  159 (375)
T cd00829          85 RAAAAAIASGLADVVLVVGAEKMSDVPTGDEA--GGRASD-LEW-EGPEP-PGGLTPPALYALAARRYMHRYGTTREDLA  159 (375)
T ss_pred             HHHHHHHHhCCCCEEEEEEEeecccCcccchh--hccccc-hhh-hhccc-ccCCChHHHHHHHHHHHHHHhCCCHHHHH
Confidence            36899999999999999999999988742110  000000 000 00000 00111135789999999999999999999


Q ss_pred             HHHHHHHHHHHhhhhCCCCCccccceeeecCCCceeEeccCCCCCCCCHHHHhcCCCccccCCccccCCCCCCCCCcEEE
Q psy4157         289 EYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAV  368 (441)
Q Consensus       289 ~~A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~g~~~~~~D~~~r~~~t~e~l~~~~~v~~p~G~lt~~n~~~~sDGAAAv  368 (441)
                      .||+++|+||.++ +.                        +++|.++|+|++.++|++++|   +|++|||+++|||+|+
T Consensus       160 ~va~~~~~~A~~n-p~------------------------A~~~~~~t~d~~~~~~~i~~p---l~~~~~~~~~DGaaa~  211 (375)
T cd00829         160 KVAVKNHRNAARN-PY------------------------AQFRKPITVEDVLNSRMIADP---LRLLDCCPVSDGAAAV  211 (375)
T ss_pred             HHHHHHHHHHhcC-Ch------------------------hhcCCCCCHHHHhcCCcccCC---CchhhcCCCCCceeEE
Confidence            9999999999754 22                        244557899999999999987   9999999999999999


Q ss_pred             EEcCHHHHHhcCCCceEEEEEEEeecCCCCc-------CCCChHHHHHHHHHHcCCCCCCccEEEecCCChhhhhhhhc
Q psy4157         369 LLMSYKTAQARNIQPLARIVAMSSAGVEPTL-------MGTGPIPAVNAVLAKAGWSKEEVGYFNRVATSGGIANRRQE  440 (441)
Q Consensus       369 VLaSe~~A~~lg~~p~a~I~~~~~~~~~p~~-------~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~~~~~~~  440 (441)
                      ||+|+++|+++ .+|.++|++++.....+..       +..+++.|++++|++|||+++|||++||||||+++++.++|
T Consensus       212 vl~s~~~a~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~did~~ei~d~F~~~~l~~~e  289 (375)
T cd00829         212 VLASEERAREL-TDRPVWILGVGAASDTPSLSERDDFLSLDAARLAARRAYKMAGITPDDIDVAELYDCFTIAELLALE  289 (375)
T ss_pred             EEecHHHHhhc-CCCCeEEEEEEEecCCccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEEecCcChHHHHHHHH
Confidence            99999999999 6788999999988765543       45567899999999999999999999999999999999887

The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.

>PRK13359 beta-ketoadipyl CoA thiolase; Provisional

Probab=99.97  E-value=7.3e-30  Score=263.30  Aligned_cols=264  Identities=33%  Similarity=0.456  Sum_probs=177.3

Q ss_pred             CCCCCcccccccCcCCC-cccccccc-----ccCCcccccCCCchHhhHHHHHHHhCCCHHHHhHHHHhcHHHHHHHHhC
Q psy4157           1 MSQAPHVINIRNGIKLN-DAEMKDSM-----VFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEG   74 (441)
Q Consensus         1 mS~~P~~~~~r~g~~~g-~~~~~d~~-----~~~~l~d~~~~~~mg~~ae~~a~~~~isRe~~D~~a~~s~~ra~~a~~~   74 (441)
                      ||++||++. +.+..++ ...+.+.+     ..+++.+.+.+..||+|||+++++||||||+||+||++||+|+.+|+++
T Consensus       120 mS~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~Sh~~a~~a~~~  198 (400)
T PRK13359        120 MSRAPFVMG-KAESAFSRQAEIFDTTIGWRFVNPLMKQLYGVDSMPETAENVATDYNVSRADQDAFALRSQQKAARAQAD  198 (400)
T ss_pred             cCCCccccc-cccccccCCcccccccccccccCCccccccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhc
Confidence            899997432 1122222 22223322     2356777788889999999999999999999999999999999999999


Q ss_pred             CCCCcceeeeEeccCCCceeeeccCCCCCCccHHHhhhcCcccccCCceecCCCCCCCCccccchhhhhcccCceeeecc
Q psy4157          75 GYFDEEIVPVVISTRKGDVVVAKDEYPKANTSVDALQKLRPVFQKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKD  154 (441)
Q Consensus        75 g~~~~ei~p~~~~~~~g~~~~~~de~~~~~~~~~~l~~l~p~f~~~g~~t~~~~~~~~dg~~~~~~~~~~~~~~~~~~~d  154 (441)
                      |+|++|||||++++++|..                                                       +.+.+|
T Consensus       199 g~~~~ei~pv~~~~~~~~~-------------------------------------------------------~~~~~D  223 (400)
T PRK13359        199 GTLAQEIVPVTIPQKKGDP-------------------------------------------------------LVVSRD  223 (400)
T ss_pred             CCCccceeeeeeccCCCCc-------------------------------------------------------eeecCC
Confidence            9999999999987543321                                                       246778


Q ss_pred             cCCCCCCCHHHHhcCCCccCCCCcccCCCCCCccccchhhhhhhHHHHHhccCcchhhHHhhhcCeeEEEEeecccCCCC
Q psy4157         155 EYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQARNIQPLARIAIKSGDATAIVAGGQECMSQA  234 (441)
Q Consensus       155 ~~~~~~~~~~~~~~l~p~~~~~g~vtagn~s~~~Dgaa~~ll~s~~~a~~~gl~~~A~~~I~sG~advvla~G~E~ms~~  234 (441)
                      |++|+ +|+|+|.+|||+|.++|++|++|+|+++|||++++|++++.++++|+.+.++.  . |       .+.-.  ..
T Consensus       224 e~~r~-~t~e~l~~l~p~f~~~g~lT~~n~~~~~DGAaa~vL~s~e~A~~~g~~~~a~I--~-g-------~~~~~--~~  290 (400)
T PRK13359        224 EHPRE-TTLEALAKLKGVVRPDGTVTAGNASGVNDGACALLLASEAAARRHGLKPRARV--L-G-------IATAG--VE  290 (400)
T ss_pred             CCCCC-CCHHHHhcCCCccCCCCceecccccCccCceEEEEEecHHHHHHCCCCccEEE--E-E-------EEEec--CC
Confidence            88886 88899999999998889999999999999999999999999999998765542  1 1       11110  11


Q ss_pred             ccchhcccccccCcccccchhhhcccccccccchHHHHHHHHHHHhCCCHHHHHHH----HHHHHHHHHhhhhCCCCCcc
Q psy4157         235 PHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEY----AYQSQVKTAKAQEGGYFDEE  310 (441)
Q Consensus       235 P~~~~~r~g~~~g~~~~~~d~~~~g~~~~~~~~~ma~~Ae~~a~~~Gitre~ld~~----A~~S~~~A~~A~~~g~f~~e  310 (441)
                      |...                           .......+++..++.|++.+|+|.|    ++.....+.. ...|.... 
T Consensus       291 p~~~---------------------------~~~~~~A~~~al~~AGl~~~DID~iei~dafa~~~l~~~-e~lg~~~~-  341 (400)
T PRK13359        291 PRVM---------------------------GIGPAPATQKLLARLGMTLDQFDVIELNEAFASQGLAVL-RELGLADD-  341 (400)
T ss_pred             CCcc---------------------------chhHHHHHHHHHHHhCCCHHHcCcCccCcHhHHHHHHHH-HHcCCCCC-
Confidence            1100                           0011345688899999999999887    5665555531 12232111 


Q ss_pred             ccceeeecCCCceeEeccCCCCCCCCHHHHhcCCCccc-cC---CccccCCCCCCCCCcEEEEE
Q psy4157         311 IVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQ-KD---GTVTAGNASGINDGAAAVLL  370 (441)
Q Consensus       311 i~Pv~v~~~~g~~~~~~D~~~r~~~t~e~l~~~~~v~~-p~---G~lt~~n~~~~sDGAAAvVL  370 (441)
                      ..|  +|..||.+.+   .|+-..+....+..+-.-+. .+   |..++|.....   +.|+||
T Consensus       342 ~~p--vN~~GG~la~---GHp~gasG~~~v~e~~~qL~~~~~~~g~~~~c~~gG~---g~a~~i  397 (400)
T PRK13359        342 DAR--VNPNGGAIAL---GHPLGASGARLVTTALYQLERTGGRFALCTMCIGVGQ---GIAIAI  397 (400)
T ss_pred             CCC--EECCCchhhc---CCchhHHHHHHHHHHHHHHhhcCCCeEEEEEcccCCc---eeEEEE
Confidence            123  4666665444   56665555555443322221 11   56666665554   445554

>PRK12578 acetyl-CoA acetyltransferase; Provisional

Probab=99.97  E-value=7.2e-30  Score=262.76  Aligned_cols=198  Identities=15%  Similarity=0.072  Sum_probs=154.9

Q ss_pred             hhhHHhhhcCeeEEEEeecccCCCCccchhcccccccCcccccchhhhcccccccccchHHHHHHHHHHHhCCCHHHHHH
Q psy4157         210 LARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDE  289 (441)
Q Consensus       210 ~A~~~I~sG~advvla~G~E~ms~~P~~~~~r~g~~~g~~~~~~d~~~~g~~~~~~~~~ma~~Ae~~a~~~Gitre~ld~  289 (441)
                      .|+.+|.+|.+++||++|.|+|+..|.......+....+ ..+.. ...+.   ..+..+++.+++||++||+|+|++++
T Consensus        91 ~A~~~I~sG~~~~vLvvg~e~~s~~~~~~~~~~~~~~~~-~~~~~-~~~g~---~~~~~~a~~a~~~m~~~g~t~e~~a~  165 (385)
T PRK12578         91 TAYTAVASGLVDMAIAVGVDKMTEVDTSTSLAIGGRGGN-YQWEY-HFYGT---TFPTYYALYATRHMAVYGTTEEQMAL  165 (385)
T ss_pred             HHHHHHHCCCCCEEEEEEEeecccCcccchhhhcccccc-ccccc-ccCCC---ChHHHHHHHHHHHHHHhCcCHHHHHH
Confidence            688999999999999999999998764211000000000 00100 00011   11345788899999999999999999


Q ss_pred             HHHHHHHHHHhhhhCCCCCccccceeeecCCCceeEeccCCCCCCCCHHHHhcCCCccccCCccccCCCCCCCCCcEEEE
Q psy4157         290 YAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVL  369 (441)
Q Consensus       290 ~A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~g~~~~~~D~~~r~~~t~e~l~~~~~v~~p~G~lt~~n~~~~sDGAAAvV  369 (441)
                      |+++||+||..+ +.                        +++|++++.|+++++|++.+|   +|++|||+++|||+|+|
T Consensus       166 va~~~~~~A~~n-p~------------------------a~~~~~i~~e~v~~s~~i~~P---l~~~d~~~~~DGAaA~v  217 (385)
T PRK12578        166 VSVKAHKYGAMN-PK------------------------AHFQKPVTVEEVLKSRAISWP---IKLLDSCPISDGSATAI  217 (385)
T ss_pred             HHHHHHHHHhcC-Ch------------------------hhcCCCCCHHHHhcCCccCCC---ccHhhcCCcCCCeEEEE
Confidence            999999999854 22                        344566789999999999988   99999999999999999


Q ss_pred             EcCHHHHHhcCCCceEEEEEEEeec------CCCCcCCC-ChHHHHHHHHHHcCCCCCCccEEEecCCChhhhhhhhc
Q psy4157         370 LMSYKTAQARNIQPLARIVAMSSAG------VEPTLMGT-GPIPAVNAVLAKAGWSKEEVGYFNRVATSGGIANRRQE  440 (441)
Q Consensus       370 LaSe~~A~~lg~~p~a~I~~~~~~~------~~p~~~~~-~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~~~~~~~  440 (441)
                      |+|+++|++++.+|.++|++++...      .+|+.+.. ++..|+++||++|||+++|||++|+||||+++++.++|
T Consensus       218 l~s~e~A~~l~~~~~~~I~g~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~DiD~~ei~d~ft~~~l~~le  295 (385)
T PRK12578        218 FASEEKVKELKIDSPVWITGIGYANDYAYVARRGEWVGFKATQLAARQAYNMAKVTPNDIEVATVHDAFTIAEIMGYE  295 (385)
T ss_pred             EecHHHHHhcCCCCCeEEEEEEEecCcccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEEecCcChHHHHHHHH
Confidence            9999999999987889999998753      23333333 46789999999999999999999999999999999887

>COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism]

Probab=99.96  E-value=3.2e-31  Score=272.99  Aligned_cols=219  Identities=42%  Similarity=0.586  Sum_probs=189.8

Q ss_pred             chhhHHhhhcCeeEEEEeecccCCCCccchhcccccccCcccccchhhhc-ccccccccchHHHHHHHHHHHhCCCHHHH
Q psy4157         209 PLARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFD-GLTDAFHNIHMGITAENIAKKWSISRLEQ  287 (441)
Q Consensus       209 ~~A~~~I~sG~advvla~G~E~ms~~P~~~~~r~g~~~g~~~~~~d~~~~-g~~~~~~~~~ma~~Ae~~a~~~Gitre~l  287 (441)
                      ..|+++|++|.+|++|++|+|+||..|..   +++..+..  ...|.++. ++++++....|+++|++||++||+|||+|
T Consensus       100 ~~A~~~I~sG~~dvvlagG~E~mS~~~~~---~~~~~~~~--~~~d~~~~~~~~~~~~~~~~g~~A~~~~~~yGitre~~  174 (392)
T COG0183         100 RLAAQAIASGEADVVLAGGVEKMSDAPMG---REGVRVLD--SAVDPMFEDPLGDATPGYLMGLTAERYAKRYGISREDQ  174 (392)
T ss_pred             HHHHHHHHCCCCCEEEEEeeeeccCCCcc---ccchhhhh--hhhhhccccccccccchhHHHHHHHHHHHHhCCCHHHH
Confidence            36999999999999999999999999973   11222221  12233222 34445456789999999999999999999


Q ss_pred             HHHHHHHHHHHHhhhhCCCCCccccceeeecCCCceeEeccCCCCCC--CCHHHHhcCCCccccC-CccccCCCCCCCCC
Q psy4157         288 DEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKAN--TTVEALQKLRPVFQKD-GTVTAGNASGINDG  364 (441)
Q Consensus       288 d~~A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~g~~~~~~D~~~r~~--~t~e~l~~~~~v~~p~-G~lt~~n~~~~sDG  364 (441)
                      |+||++||+||.+|.+.++| +||+|.++...    .+..|+.+|.+  ++.|.+.+++|.+++. |++|++|.|+++||
T Consensus       175 d~~Av~sh~~A~~np~a~~~-~eI~~~~v~~~----~~~~dp~~r~d~~~~~dg~a~l~~a~~~~~g~~tagnas~i~dg  249 (392)
T COG0183         175 DEVAVKSHKNAAANPKAGFF-DEITPEDVLNS----PVVADPLRRLDCSPTSDGAAALVPAFEEVGGTVTAGNASGINDG  249 (392)
T ss_pred             HHHHHHHHHHHHhhHhcCCC-CceeeEEecCC----ceecCCcccCCCCCChhhhcCceeccccCCceEEEecccccccH
Confidence            99999999999999888888 99999987653    46789999998  9999999999999765 79999999999999


Q ss_pred             cEEEEEcCHHHHHhcCCCceEEEEEEEeecCCCCcCCCChHHHHHHHHHHcCCC-CCCccEEEecCCChhhhhhh
Q psy4157         365 AAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWS-KEEVGYFNRVATSGGIANRR  438 (441)
Q Consensus       365 AAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~~p~~~~~~~~~Aa~~al~~AGl~-~~DID~~Ei~D~Ft~~~~~~  438 (441)
                      |+++++++++.++++++.|+++++++..++.+|..+ ..++.+++++|++++|. ++|||++|+||.|..+..-.
T Consensus       250 a~a~~~~~~~~~~~~~l~~~A~~~a~~~aGv~p~~~-~~~v~av~~~~~~~~l~~~edlgl~e~nEafa~~~~~~  323 (392)
T COG0183         250 AAALLLMSESKAKELGLAPLAAIRAYAMAGVDPSIM-DGPVAAVHDALTIAGLLALEDLGLAEKGEAFAAVALGV  323 (392)
T ss_pred             HHHHHHhhHHHHHHCCCcHHHHHHHHHHhCCCcccc-cCCHHHHHHHHHHcCCchhhhcCceecChHHHHHHHhh
Confidence            999999999999999999999999999999999998 99999999999999999 99999999999999887644

>PRK08313 acetyl-CoA acetyltransferase; Provisional

Probab=99.96  E-value=1.4e-29  Score=260.52  Aligned_cols=192  Identities=15%  Similarity=0.085  Sum_probs=154.2

Q ss_pred             hhhHHhhhcCeeEEEEeecccCCCCccchhcccccccCcccccchhhhcccccccccchHHHHHHHHHHHhCCCHHHHHH
Q psy4157         210 LARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDE  289 (441)
Q Consensus       210 ~A~~~I~sG~advvla~G~E~ms~~P~~~~~r~g~~~g~~~~~~d~~~~g~~~~~~~~~ma~~Ae~~a~~~Gitre~ld~  289 (441)
                      .|+..|++|.+++||++|.|+|+..+....    ... + ..+..   +  .....+..|++.+++||++||+++|++.+
T Consensus        95 ~A~~~I~sG~~~~vLVvg~e~~s~~~~~~~----~~~-~-~~~~~---~--~g~~~~~~~al~a~~ym~~~G~~~e~la~  163 (386)
T PRK08313         95 VAASLVQSGVYRRVLAVAWEKQSESNAMWA----LSI-P-VPFTK---P--VGAGAGGYFAPHVRAYIRRSGAPEHIGAM  163 (386)
T ss_pred             HHHHHHHCCCCCEEEEEEEEEccCCccccc----ccc-c-ccccc---c--cccchHHHHHHHHHHHHHHHCcCHHHHHH
Confidence            688899999999999999999876521111    000 0 00101   0  11122457899999999999999999999


Q ss_pred             HHHHHHHHHHhhhhCCCCCccccceeeecCCCceeEeccCCCCCC-CCHHHHhcCCCccccCCccccCCCCCCCCCcEEE
Q psy4157         290 YAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKAN-TTVEALQKLRPVFQKDGTVTAGNASGINDGAAAV  368 (441)
Q Consensus       290 ~A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~g~~~~~~D~~~r~~-~t~e~l~~~~~v~~p~G~lt~~n~~~~sDGAAAv  368 (441)
                      |++++|+||.++           |.              .++|++ +|+|+|+++++|++|   +|++|||+++|||||+
T Consensus       164 vav~~~~~A~~N-----------P~--------------A~~r~~~~t~e~v~~s~~ia~P---l~~~d~~~~~DGAaAv  215 (386)
T PRK08313        164 VAVKDRLNGAKN-----------PY--------------AHLHQPDITLEKVMASQMLWDP---IRFDETCPSSDGACAV  215 (386)
T ss_pred             HHHHHHHHHccC-----------cH--------------HhcCCCCCCHHHHhcCCcccCC---CchhccCCCCCceEEE
Confidence            999999999742           32              456664 999999999999998   9999999999999999


Q ss_pred             EEcCHHHHHhcCCCceEEEEEEEeecCCC------CcCCCChHHHHHHHHHHcCCC--CCCccEEEecCCChhhhhhhhc
Q psy4157         369 LLMSYKTAQARNIQPLARIVAMSSAGVEP------TLMGTGPIPAVNAVLAKAGWS--KEEVGYFNRVATSGGIANRRQE  440 (441)
Q Consensus       369 VLaSe~~A~~lg~~p~a~I~~~~~~~~~p------~~~~~~~~~Aa~~al~~AGl~--~~DID~~Ei~D~Ft~~~~~~~~  440 (441)
                      ||+|+++|++++.+|.++|++++......      .....+.+.|+++||++||++  ++|||++||||||++.+..++|
T Consensus       216 vl~s~e~a~~l~~~~~~~I~g~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~Agi~~p~~Did~~el~d~F~~~~~~~~e  295 (386)
T PRK08313        216 VIGDEEAADAAAGRPVAWIHGTAMRTEPLAFAGRDQVNPQAGRDAAAALWKAAGITDPRDEIDVAEIYVPFSWFEPMWLE  295 (386)
T ss_pred             EEecHHHHHhcCCCCCeEEEEEEEEecCcccccccccccHHHHHHHHHHHHHcCCCCChhhCCEEEeccCChHHHHHHHH
Confidence            99999999999888989999998764321      122345678999999999998  7999999999999999999887

>PRK06158 thiolase; Provisional

Probab=99.96  E-value=1.3e-29  Score=260.70  Aligned_cols=192  Identities=15%  Similarity=0.132  Sum_probs=150.6

Q ss_pred             hhhHHhhhcCeeEEEEe-ecccCCCCccchhcccccccCcccccchhhhcccccccccchHHHHHHHHHHHhCCCHHHHH
Q psy4157         210 LARIAIKSGDATAIVAG-GQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQD  288 (441)
Q Consensus       210 ~A~~~I~sG~advvla~-G~E~ms~~P~~~~~r~g~~~g~~~~~~d~~~~g~~~~~~~~~ma~~Ae~~a~~~Gitre~ld  288 (441)
                      .|+..|.+|.+|+|||+ |.|+|+.......     ...+ ..+..+  .+..  .....|++.+++||++||+|+|+++
T Consensus        94 ~A~~~I~sG~~d~vLV~~g~~~~~~~~~~~~-----~~~~-~~~~~~--~g~~--~~~~~~al~a~~ym~~yG~t~e~~a  163 (384)
T PRK06158         94 PAALALEAGLCDVALICYGSNQRSAGGKLRS-----MLDP-QPYEAP--YKPV--NPVSAYALAAARHMHQYGTTREQLA  163 (384)
T ss_pred             HHHHHHHcCCCCEEEEeeccccccCcccccc-----cccc-cchhcc--cCCC--CcHHHHHHHHHHHHHHHCcCHHHHH
Confidence            68999999999999985 7787764211100     0000 001000  0111  1134689999999999999999999


Q ss_pred             HHHHHHHHHHHhhhhCCCCCccccceeeecCCCceeEeccCCCCCCCCHHHHhcCCCccccCCccccCCCCCCCCCcEEE
Q psy4157         289 EYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAV  368 (441)
Q Consensus       289 ~~A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~g~~~~~~D~~~r~~~t~e~l~~~~~v~~p~G~lt~~n~~~~sDGAAAv  368 (441)
                      +|++++|+||..+           |.              +++|+++|+|+++++|+|.+|   +|++|||+++|||+|+
T Consensus       164 ~vav~~~~~a~~N-----------P~--------------A~~~~~~t~e~vl~s~~ia~P---l~~~d~~~~~DGAaAv  215 (384)
T PRK06158        164 EVAVAARQWAQLN-----------PE--------------AFMRDPLTIDDVLAARMVSDP---LSVRDCCLVTDGAGAV  215 (384)
T ss_pred             HHHHHHHHHHhcC-----------ch--------------hhhCCCCCHHHHhcCCccCCC---CchhhcCCccCCeEEE
Confidence            9999999999742           22              567788999999999999998   9999999999999999


Q ss_pred             EEcCHHHHHhcCCCceEEEEEEEeecC------CCCcCCCChHHHHHHHHHHcCCCCCCccEEEecCCChhhhhhhhc
Q psy4157         369 LLMSYKTAQARNIQPLARIVAMSSAGV------EPTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATSGGIANRRQE  440 (441)
Q Consensus       369 VLaSe~~A~~lg~~p~a~I~~~~~~~~------~p~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~~~~~~~  440 (441)
                      ||+|+++|++++.+| ++|++++....      .++....+...|+++||++|||+++|||++||||||+++...|+|
T Consensus       216 VL~s~e~A~~l~~~~-v~i~g~~~~~~~~~~~~~~~~~~~~~~~aa~~A~~~AGi~p~DId~~ElyD~Fs~~~l~~~E  292 (384)
T PRK06158        216 VMVRADRARDLPRPP-VYVLGAAAATWHRQISSMPDLTVTAAAESGPRAFAMAGLTPADIDVVELYDAFTINTILFLE  292 (384)
T ss_pred             EEecHHHHhhcCCCc-EEEEEEEEecCCcccccccchhhhHHHHHHHHHHHHcCCCHHHCcEEEecCCchHHHHHHHH
Confidence            999999999998766 78888875532      123333445679999999999999999999999999999999988

>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine

Probab=99.96  E-value=2.6e-29  Score=259.07  Aligned_cols=202  Identities=33%  Similarity=0.454  Sum_probs=159.5

Q ss_pred             chhhHHhhhcCeeEEEEeecccCCCCccchhcccccccCcccccchhhhcccccccccchHHHHHHHHHHHhCCCHHHHH
Q psy4157         209 PLARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQD  288 (441)
Q Consensus       209 ~~A~~~I~sG~advvla~G~E~ms~~P~~~~~r~g~~~g~~~~~~d~~~~g~~~~~~~~~ma~~Ae~~a~~~Gitre~ld  288 (441)
                      ..|+..|++|.++++|++|.|+|+..|....     .  .                  ..+    ..+..+|| +|++++
T Consensus        93 ~~A~~~I~sG~~~~vlv~g~e~~s~~~~~~~-----~--~------------------~~~----~~~~~~~~-~r~~~~  142 (393)
T cd00826          93 ALAMQLIAGGDANCILAGGFEKMETSAENNA-----K--E------------------KHI----DVLINKYG-MRACPD  142 (393)
T ss_pred             HHHHHHHHCCCCCEEEEEeeeccccCccccc-----c--c------------------chh----HHHHHHhC-Chhhcc
Confidence            3688999999999999999999998762100     0  0                  000    12355778 888899


Q ss_pred             HHHHHHHHHHHhhhhCCCCCccccceeeecCCCceeEe--ccCCCCCCCCHHHHhcCCCccccCCccccCCCCCCCCCcE
Q psy4157         289 EYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVA--KDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAA  366 (441)
Q Consensus       289 ~~A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~g~~~~~--~D~~~r~~~t~e~l~~~~~v~~p~G~lt~~n~~~~sDGAA  366 (441)
                      .+++.||..+..+++.|.+.+++.|+.++.++|.....  +..++++++|+|+|++++|++.+++++|++|||+++||||
T Consensus       143 ~~a~~s~~~~~~~~~~G~~~e~~a~v~~~~~~~~~~a~~np~a~~~~~~t~e~~~~~~~i~~~~~pl~~~~~~~~~DGAA  222 (393)
T cd00826         143 AFALAGQAGAEAAEKDGRFKDEFAKFGVKGRKGDIHSDADEYIQFGDEASLDEIAKLRPAFDKEDFLTAGNACGLNDGAA  222 (393)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHEEEEEEecCCCCEEEecCCCCCCCCCCCHHHHhcCCCccCCCCCEechhcCCcCCCeE
Confidence            99999998888888889988888888877643322233  3445557799999999999995456699999999999999


Q ss_pred             EEEEcCHHHHHhcCC-------CceEEEEEEEeecCCCC----cCCCChHHHHHHHHHHcCCCCCCccEEEecCCChhhh
Q psy4157         367 AVLLMSYKTAQARNI-------QPLARIVAMSSAGVEPT----LMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATSGGIA  435 (441)
Q Consensus       367 AvVLaSe~~A~~lg~-------~p~a~I~~~~~~~~~p~----~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~~  435 (441)
                      |+||+|+++|+++++       .|.++++++.....+|.    .+..+++.|+++||++|||+++|||++||||||++.+
T Consensus       223 A~vl~S~~~a~~l~l~~~~v~i~~~a~~~~~~~~~~~~~~~~~~~~~~~~~A~~~al~~Agi~~~DID~~Ei~d~Fa~~~  302 (393)
T cd00826         223 AAILMSEAEAQKHGLQSKAREIQALEMITDMASTFEDKKVIKMVGGDGPIEAARKALEKAGLGIGDLDLIEAHDAFAANA  302 (393)
T ss_pred             EEEEecHHHHHHcCCcccccccceEEEEEeeeccccCccccccccceeHHHHHHHHHHHcCCCHHHcCeeehhhhhHHHH
Confidence            999999999999986       23444444444455565    4567789999999999999999999999999999999


Q ss_pred             hhhhc
Q psy4157         436 NRRQE  440 (441)
Q Consensus       436 ~~~~~  440 (441)
                      +.++|
T Consensus       303 l~~~e  307 (393)
T cd00826         303 CATNE  307 (393)
T ss_pred             HHHHH
Confidence            99987

There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.

>PTZ00455 3-ketoacyl-CoA thiolase; Provisional

Probab=99.96  E-value=5e-29  Score=259.72  Aligned_cols=207  Identities=15%  Similarity=0.082  Sum_probs=148.5

Q ss_pred             hhhHHhhhcCeeEEEEeecccCCCCccchhcccccccCcccccchhhhcccccccccchHHHHHHHHHHHhC-CCHHHHH
Q psy4157         210 LARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWS-ISRLEQD  288 (441)
Q Consensus       210 ~A~~~I~sG~advvla~G~E~ms~~P~~~~~r~g~~~g~~~~~~d~~~~g~~~~~~~~~ma~~Ae~~a~~~G-itre~ld  288 (441)
                      .|+.+|++|++|+|||+|+|+|+..|.......   +.....+ .. ...+.+...+..+++.+ +||++|| +|||+||
T Consensus       129 ~A~~~I~sG~~dvvlv~G~E~ms~~~~~~~~~~---~~~~~~~-~~-~~~~~~~~~~~~~a~~~-~ym~~~ggitrE~la  202 (438)
T PTZ00455        129 SAWEALLAGTSDIALVVGVEVQTTVSARVGGDY---LARAADY-RR-QRKLDDFTFPCLFAKRM-KYIQEHGHFTMEDTA  202 (438)
T ss_pred             HHHHHHHCCCCCEEEEEEEeecccCcchhhhhh---ccchhhc-cc-cccccCcchHHHHHHHH-HHHHHHCCCCHHHHH
Confidence            789999999999999999999999885321000   0000000 00 00000100122345443 8899996 9999999


Q ss_pred             HHHHHHHHHHHhhhhCCCCCccccceeeecCCCceeEeccCCCCCCCCHHHHhcCCCccccCCccccCCCCCCCCCcEEE
Q psy4157         289 EYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAV  368 (441)
Q Consensus       289 ~~A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~g~~~~~~D~~~r~~~t~e~l~~~~~v~~p~G~lt~~n~~~~sDGAAAv  368 (441)
                      +||+++|.++..+ +..++.+.  |+       .+....|+.+|   +. ++++++++..|   ++++|||+++|||||+
T Consensus       203 ~vAvka~~~a~~n-P~A~~~~~--~~-------t~~~~~d~~~~---~~-e~l~s~~i~~p---l~~~d~s~~sDGAaA~  265 (438)
T PTZ00455        203 RVAAKAYANGNKN-PLAHMHTR--KL-------SLEFCTGASDK---NP-KFLGNETYKPF---LRMTDCSQVSDGGAGL  265 (438)
T ss_pred             HHHHHHHHHHhcC-CHhhccCC--CC-------Cceeecccccc---ch-hhhcCCcccCc---CchhcCCCccccceEE
Confidence            9999999999753 22222110  11       11223466666   33 45567778766   9999999999999999


Q ss_pred             EEcCHHHHHhcCCCc----eEEEEEEEeecC----CC---CcCCCChHHHHHHHHHHcCCCCCCccEEEecCCChhhhhh
Q psy4157         369 LLMSYKTAQARNIQP----LARIVAMSSAGV----EP---TLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATSGGIANR  437 (441)
Q Consensus       369 VLaSe~~A~~lg~~p----~a~I~~~~~~~~----~p---~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~~~~  437 (441)
                      ||+|+++|++++++|    .++|++++..+.    +|   ..++. .+.|++++|++|||+++|||++||||||++.+..
T Consensus       266 vl~See~A~~l~~~p~~~~~v~i~g~~~~~~~~~~~~~~~~~~~~-~~~A~~~a~~~AGl~~~DiD~~Ei~daFa~~~l~  344 (438)
T PTZ00455        266 VLASEEGLQKMGLSPNDSRLVEIKSLACASGNLYEDPPDATRMFT-SRAAAQKALSMAGVKPSDLQVAEVHDCFTIAELL  344 (438)
T ss_pred             EEecHHHHHhcCCCCCCCccEEEEEEEEecCCcccCccccccchH-HHHHHHHHHHHcCCCHHHCcEeeecccChHHHHH
Confidence            999999999999888    799999998865    44   22333 3789999999999999999999999999999999


Q ss_pred             hhc
Q psy4157         438 RQE  440 (441)
Q Consensus       438 ~~~  440 (441)
                      ++|
T Consensus       345 ~~e  347 (438)
T PTZ00455        345 MYE  347 (438)
T ss_pred             HHH
Confidence            987

>PRK07516 acetyl-CoA acetyltransferase; Provisional

Probab=99.96  E-value=4.7e-29  Score=257.02  Aligned_cols=193  Identities=21%  Similarity=0.157  Sum_probs=148.8

Q ss_pred             chhhHHhhhcCeeEEEEeecccCCCCccch-h-cccccccCcccccchhhhcccccccccchHHHHHHHHHHHhCCCHHH
Q psy4157         209 PLARIAIKSGDATAIVAGGQECMSQAPHVI-N-IRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLE  286 (441)
Q Consensus       209 ~~A~~~I~sG~advvla~G~E~ms~~P~~~-~-~r~g~~~g~~~~~~d~~~~g~~~~~~~~~ma~~Ae~~a~~~Gitre~  286 (441)
                      .+|+..|++|.+|++|++|.|+|+..|... . ...+..++.      .... .... ....|++.+++||++||+++|+
T Consensus        93 ~~A~~~I~sG~~d~vLvvg~e~~s~~~~~~~~~~~~~~~~~~------~~~~-~~~~-~~~~~a~~a~~y~~~yg~~~e~  164 (389)
T PRK07516         93 YAALDAIEAGRARIVLVVGAEKMTATPTAEVGDILLGASYLK------EEGD-TPGG-FAGVFGRIAQAYFQRYGDQSDA  164 (389)
T ss_pred             HHHHHHHHCCCCCEEEEEEehhhccCcchhhHHHhhhccccc------cccc-cCCC-cHHHHHHHHHHHHHHHCCCHHH
Confidence            368999999999999999999999887532 1 011101100      0000 0011 1236999999999999999999


Q ss_pred             HHHHHHHHHHHHHhhhhCCCCCccccceeeecCCCceeEeccCCCCCCCCHHH----HhcCCCccccCCccccCCCCCCC
Q psy4157         287 QDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEA----LQKLRPVFQKDGTVTAGNASGIN  362 (441)
Q Consensus       287 ld~~A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~g~~~~~~D~~~r~~~t~e~----l~~~~~v~~p~G~lt~~n~~~~s  362 (441)
                      +++||++||+||..+           |+              +++|+++|+|+    +.+++++.+|   +|++|||+++
T Consensus       165 ~a~vav~~~~~A~~n-----------P~--------------A~~~~~~t~~~~~~~~~~~~~i~~p---l~~~d~~~~~  216 (389)
T PRK07516        165 LAMIAAKNHANGVAN-----------PY--------------AQMRKDLGFEFCRTVSEKNPLVAGP---LRRTDCSLVS  216 (389)
T ss_pred             HHHHHHHHHHhhhcC-----------Ch--------------hhcCCcccHHhhhhhhhcCCcccCC---CchhhcCCcC
Confidence            999999999999752           33              24455566664    6778888877   9999999999


Q ss_pred             CCcEEEEEcCHHHHHhcCCCceEEEEEEEeecC-------CCCcCCCChHHHHHHHHHHcCCCCCCccEEEecCCChhhh
Q psy4157         363 DGAAAVLLMSYKTAQARNIQPLARIVAMSSAGV-------EPTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATSGGIA  435 (441)
Q Consensus       363 DGAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~-------~p~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~~  435 (441)
                      |||+|+||+|+++|++++  +.++|++++....       ++. ...++..|++++|+++||+++|||++|+||+|+++.
T Consensus       217 DGAaa~il~s~~~a~~~~--~~v~i~g~~~~~~~~~~~~~~~~-~~~~~~~a~~~a~~~agl~~~did~~e~~d~f~~~~  293 (389)
T PRK07516        217 DGAAALVLADAETARALQ--RAVRFRARAHVNDFLPLSRRDPL-AFEGPRRAWQRALAQAGVTLDDLSFVETHDCFTIAE  293 (389)
T ss_pred             cceEEEEEecHHHHHhcC--CCEEEEEEEeccCcccccCCCcc-ccHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCHHH
Confidence            999999999999999984  3589999987632       222 234567899999999999999999999999999999


Q ss_pred             hhhhc
Q psy4157         436 NRRQE  440 (441)
Q Consensus       436 ~~~~~  440 (441)
                      +.++|
T Consensus       294 ~~~~e  298 (389)
T PRK07516        294 LIEYE  298 (389)
T ss_pred             HHHHH
Confidence            99887

>PRK07855 lipid-transfer protein; Provisional

Probab=99.96  E-value=8.6e-29  Score=254.65  Aligned_cols=200  Identities=14%  Similarity=0.074  Sum_probs=146.4

Q ss_pred             hhhHHhhhcCeeEEEEeecc--cCCCCccchhcccccccCcccccchhhhc-ccccccccchHHHHHHHHHHHhCCCHHH
Q psy4157         210 LARIAIKSGDATAIVAGGQE--CMSQAPHVINIRNGIKLNDAEMKDSMVFD-GLTDAFHNIHMGITAENIAKKWSISRLE  286 (441)
Q Consensus       210 ~A~~~I~sG~advvla~G~E--~ms~~P~~~~~r~g~~~g~~~~~~d~~~~-g~~~~~~~~~ma~~Ae~~a~~~Gitre~  286 (441)
                      .|+.+|++|.+|+||++|..  .+......................++..+ ++..  ....|++.+++||++||+|+|+
T Consensus        90 ~A~~~I~sG~~d~vLv~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~al~a~~ym~~~G~t~e~  167 (386)
T PRK07855         90 QAAMAVATGVADVVVCYRAFNERSGMRFGQGQTGLAENPTSTGVDYGWSYPHGLLT--PAAWVAMLARRYMHEYGATSED  167 (386)
T ss_pred             HHHHHHHCCCCCEEEEEeecccccccccccccccccccccccccchhhhhhcCCCC--hHHHHHHHHHHHHHHHCCCHHH
Confidence            68999999999999998872  22111000000000000000000011111 2111  1246899999999999999999


Q ss_pred             HHHHHHHHHHHHHhhhhCCCCCccccceeeecCCCceeEeccCCC-CCCCCHHHHhcCCCccccCCccccCCCCCCCCCc
Q psy4157         287 QDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYP-KANTTVEALQKLRPVFQKDGTVTAGNASGINDGA  365 (441)
Q Consensus       287 ld~~A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~g~~~~~~D~~~-r~~~t~e~l~~~~~v~~p~G~lt~~n~~~~sDGA  365 (441)
                      +++|++++|+||..+           |.              +++ |+++|+|+++++|+|.+|   +|++|||+++|||
T Consensus       168 lA~vavk~~~~A~~N-----------P~--------------A~~~~~~~t~e~vl~s~~Ia~P---l~~~d~~~~sDGA  219 (386)
T PRK07855        168 FGRVAVADRKHAATN-----------PK--------------AWFYGRPITLEDHQNSRWIAEP---LRLLDCCQESDGA  219 (386)
T ss_pred             HHHHHHHHHHHHhcC-----------hH--------------hhhcCCCCCHHHHhcCCcccCC---chhhhcCCcCCce
Confidence            999999999999742           32              455 467999999999999998   9999999999999


Q ss_pred             EEEEEcCHHHHHhcCCCceEEEEEEEeecCCC---------CcCC--CChHHHHHHHHHHcCCCCCCccEEEecCCChhh
Q psy4157         366 AAVLLMSYKTAQARNIQPLARIVAMSSAGVEP---------TLMG--TGPIPAVNAVLAKAGWSKEEVGYFNRVATSGGI  434 (441)
Q Consensus       366 AAvVLaSe~~A~~lg~~p~a~I~~~~~~~~~p---------~~~~--~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~  434 (441)
                      ||+||+|+++|++++.+| ++|.+++......         ..+.  .+...|+++||++|||+++|||++||||||+++
T Consensus       220 aAvvl~see~A~~l~~~p-v~I~g~~~~~~~~~~~~~~~~~~d~~~~~~~~~aa~~a~~~AGi~~~DiDv~El~D~Ft~~  298 (386)
T PRK07855        220 VALVVTSAERARDLKQRP-AVIKAAAQGSGADQYMMTSYYRDDITGLPEMGLVARQLWAQSGLGPADIDTAILYDHFTPF  298 (386)
T ss_pred             EEEEEecHHHHhhCCCCC-EEEEEEEEecCCccccccccccccccccchHHHHHHHHHHHcCCCHHHCcEEEeccCCcHH
Confidence            999999999999998777 6999998743211         0111  122479999999999999999999999999999


Q ss_pred             hhhhhc
Q psy4157         435 ANRRQE  440 (441)
Q Consensus       435 ~~~~~~  440 (441)
                      ++.++|
T Consensus       299 ~l~~~E  304 (386)
T PRK07855        299 VLMQLE  304 (386)
T ss_pred             HHHHHH
Confidence            999988

>PRK06059 lipid-transfer protein; Provisional

Probab=99.96  E-value=5.7e-29  Score=257.25  Aligned_cols=198  Identities=16%  Similarity=0.136  Sum_probs=153.5

Q ss_pred             chhhHHhhhcCeeEEEEeecccCCCCccchhcccccccCcccccchhhhcccccccccchHHHHHHHHHHHhCCCHHHHH
Q psy4157         209 PLARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQD  288 (441)
Q Consensus       209 ~~A~~~I~sG~advvla~G~E~ms~~P~~~~~r~g~~~g~~~~~~d~~~~g~~~~~~~~~ma~~Ae~~a~~~Gitre~ld  288 (441)
                      .+|+.+|++|.++++|++|.|+|+..... . ..+....+ ..+......++..   +..|++.+++||++||+++|++.
T Consensus        93 ~~A~~~I~sG~~~~vLvvg~e~~s~~~~~-~-~~~~~~~~-~~~~~~~~~g~~~---~~~~al~a~~~~~~yg~s~e~~a  166 (399)
T PRK06059         93 QSARAQILAGLCDVALVVGADTTPKGFFA-P-VGGERPDD-PDWLRFHLIGATN---PVYFALLARRRMDLYGATVEDFA  166 (399)
T ss_pred             HHHHHHHHCCCCCEEEEEEEcccCCCCCc-c-cccccccc-cchhhcccCCCcc---HHHHHHHHHHHHHHhCCCHHHHH
Confidence            36899999999999999999999863211 1 00101111 1110000012221   35799999999999999999999


Q ss_pred             HHHHHHHHHHHhhhhCCCCCccccceeeecCCCceeEeccCCCCCCCCHHHHhcCCCccccCCccccCCCCCCCCCcEEE
Q psy4157         289 EYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAV  368 (441)
Q Consensus       289 ~~A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~g~~~~~~D~~~r~~~t~e~l~~~~~v~~p~G~lt~~n~~~~sDGAAAv  368 (441)
                      .|++++|.+|..                         ++|+++|+++|+|+|++++++++|   +|++|||+++|||||+
T Consensus       167 ~v~~~~~~~a~~-------------------------Np~A~~r~~~t~e~v~~s~~i~~P---l~~~d~~~~~DGAaA~  218 (399)
T PRK06059        167 QVKVKNARHGLL-------------------------NPNARYRKEVTVEDVLASPVVSDP---LRLLDICATSDGAAAL  218 (399)
T ss_pred             HHHHHHHHHHcc-------------------------CcHhhcCCCCCHHHHhcCCcccCC---CchhhcCCCCCceEEE
Confidence            999999999852                         224678889999999999999988   9999999999999999


Q ss_pred             EEcCHHHHHhc--CCCceEEEEEEEeecC-CC----CcCCCC--------------hHHHHHHHHHHcCCCCCCccEEEe
Q psy4157         369 LLMSYKTAQAR--NIQPLARIVAMSSAGV-EP----TLMGTG--------------PIPAVNAVLAKAGWSKEEVGYFNR  427 (441)
Q Consensus       369 VLaSe~~A~~l--g~~p~a~I~~~~~~~~-~p----~~~~~~--------------~~~Aa~~al~~AGl~~~DID~~Ei  427 (441)
                      ||+|+++|+++  +.+|.++|++++..+. .+    ......              ...+++++|+++||+++|||++||
T Consensus       219 vl~s~~~A~~l~~~~~~~v~I~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~a~~~a~~~agl~~~Did~~El  298 (399)
T PRK06059        219 IVASKSFARRHLGSVAGVPSVRAISTVTPRYPQHLPELPDIATDSTAAVPAPERVFKDQILDAAYAEAGIGPEDLSLAEV  298 (399)
T ss_pred             EEecHHHHHhhccccCCceEEEEEEEecccccccccccccccccccccccccccHHHHHHHHHHHHHcCCCHHHCcEEee
Confidence            99999999999  7778899999987652 21    111111              146799999999999999999999


Q ss_pred             cCCChhhhhhhhc
Q psy4157         428 VATSGGIANRRQE  440 (441)
Q Consensus       428 ~D~Ft~~~~~~~~  440 (441)
                      ||||+++.+.++|
T Consensus       299 ~d~f~~~~l~~~e  311 (399)
T PRK06059        299 YDLSTALELDWYE  311 (399)
T ss_pred             cccChHHHHHHHH
Confidence            9999999999987

>PRK06064 acetyl-CoA acetyltransferase; Provisional

Probab=99.96  E-value=1.3e-28  Score=253.63  Aligned_cols=197  Identities=21%  Similarity=0.175  Sum_probs=155.0

Q ss_pred             chhhHHhhhcCeeEEEEeecccCCCCccchhcccccccCcccccchhhhcccccccccchHHHHHHHHHHHhCCCHHHHH
Q psy4157         209 PLARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQD  288 (441)
Q Consensus       209 ~~A~~~I~sG~advvla~G~E~ms~~P~~~~~r~g~~~g~~~~~~d~~~~g~~~~~~~~~ma~~Ae~~a~~~Gitre~ld  288 (441)
                      .+|+.+|++|.++++|++|.|+|+..|.....+.....++ ..+..+  .++.   .+..|++.+++|+++||+++|+++
T Consensus        93 ~~A~~~I~sG~~~~vLv~G~e~~s~~~~~~~~~~~~~~~~-~~~~~~--~g~~---~~~~~al~a~~~~~~yG~s~e~~a  166 (389)
T PRK06064         93 RQAYLAVASGEADVVLAAGVEKMTDVPTPDATEAIARAGD-YEWEEF--FGAT---FPGLYALIARRYMHKYGTTEEDLA  166 (389)
T ss_pred             HHHHHHHHCCCCCEEEEEEEEecccCcchhhhhhhhcccc-cccccc--cCCc---hHHHHHHHHHHHHHHHCCCHHHHH
Confidence            3789999999999999999999998764211000000011 000000  0111   134789999999999999999999


Q ss_pred             HHHHHHHHHHHhhhhCCCCCccccceeeecCCCceeEeccCCCCCCCCHHHHhcCCCccccCCccccCCCCCCCCCcEEE
Q psy4157         289 EYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAV  368 (441)
Q Consensus       289 ~~A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~g~~~~~~D~~~r~~~t~e~l~~~~~v~~p~G~lt~~n~~~~sDGAAAv  368 (441)
                      +|+++||+||.++           |.              .++|+++|+|+|++++++++|   +|++|||+++|||+|+
T Consensus       167 ~~a~~~~~~A~~n-----------p~--------------a~~~~~~t~~~~~~s~~i~~P---l~~~d~~~~~dGAaa~  218 (389)
T PRK06064        167 LVAVKNHYNGSKN-----------PY--------------AQFQKEITVEQVLNSPPVADP---LKLLDCSPITDGAAAV  218 (389)
T ss_pred             HHHHHHHHHHhhC-----------cH--------------hhhCCCCCHHHHhcCCcccCC---CchhhcCCCCCcceEE
Confidence            9999999999753           21              355667899999999999988   9999999999999999


Q ss_pred             EEcCHHHHHhcCCCceEEEEEEEeecCCC------Cc-CCCChHHHHHHHHHHcCCCCCCccEEEecCCChhhhhhhhc
Q psy4157         369 LLMSYKTAQARNIQPLARIVAMSSAGVEP------TL-MGTGPIPAVNAVLAKAGWSKEEVGYFNRVATSGGIANRRQE  440 (441)
Q Consensus       369 VLaSe~~A~~lg~~p~a~I~~~~~~~~~p------~~-~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~~~~~~~  440 (441)
                      ||+|++.|++++.+| ++|++++.....+      +. ...++..|++++|+++||+++|||++|+||+|+++...++|
T Consensus       219 vL~s~~~A~~~~~~~-v~I~g~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~aGi~~~did~~e~~d~ft~~~~~~~e  296 (389)
T PRK06064        219 ILASEEKAKEYTDTP-VWIKASGQASDTIALHDRKDFTTLDAAVVAAEKAYKMAGIEPKDIDVAEVHDCFTIAEILAYE  296 (389)
T ss_pred             EEecHHHHHHhcCCC-eEEEEEEEecCcccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEEecCCCcHHHHHHHH
Confidence            999999999998666 5999998765433      22 23345689999999999999999999999999999998887

>KOG1392|consensus

Probab=99.96  E-value=7.9e-30  Score=243.00  Aligned_cols=222  Identities=31%  Similarity=0.439  Sum_probs=180.4

Q ss_pred             hhHHhhhcCeeEEEEeecccCCCCccchh--ccc---cc----ccCcc----cccc-hhhh---cccccccccchHHHHH
Q psy4157         211 ARIAIKSGDATAIVAGGQECMSQAPHVIN--IRN---GI----KLNDA----EMKD-SMVF---DGLTDAFHNIHMGITA  273 (441)
Q Consensus       211 A~~~I~sG~advvla~G~E~ms~~P~~~~--~r~---g~----~~g~~----~~~~-d~~~---~g~~~~~~~~~ma~~A  273 (441)
                      +.-+|.+|.+|+++++|+|-||..|++..  .|.   +.    .++..    ..++ +.+.   +...+..+...||..+
T Consensus       138 gmgliatg~~dvivaggvelmsdvpirhsrkmrklml~~nkak~~gqrl~l~s~fr~nflapelpavaefstgetmghsa  217 (465)
T KOG1392|consen  138 GMGLIATGNADVIVAGGVELMSDVPIRHSRKMRKLMLGMNKAKDVGQRLKLGSQFRKNFLAPELPAVAEFSTGETMGHSA  217 (465)
T ss_pred             cceeEeeCCcCEEEEcceeecccCchhhhHHHHHHhhccccccchhhhhhHHhhhhhhccCcCcchheeccccccccccH
Confidence            44467899999999999999999998653  110   00    11100    0111 1111   1222333456899999


Q ss_pred             HHHHHHhCCCHHHHHHHHHHHHHHHHhhhhCCCCCccccceeeecCCCceeEeccCCCCCCCCHHHHhcCCCccc-cCCc
Q psy4157         274 ENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQ-KDGT  352 (441)
Q Consensus       274 e~~a~~~Gitre~ld~~A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~g~~~~~~D~~~r~~~t~e~l~~~~~v~~-p~G~  352 (441)
                      .+++..|+++|.+||+||++||..|.+|+++|.|.+ ++|+++..++- ++ .+|..+|. .++|++.+++|.|- |-|+
T Consensus       218 drlaaafnvsr~eqdeyalrshtlakeaq~~g~ftd-vvpfkv~gkd~-~t-~kdngirv-ssle~laklkpafvkpygt  293 (465)
T KOG1392|consen  218 DRLAAAFNVSRREQDEYALRSHTLAKEAQKNGKFTD-VVPFKVDGKDP-KT-IKDNGIRV-SSLEKLAKLKPAFVKPYGT  293 (465)
T ss_pred             HHHHHHhccchhhhhHHHHhhhHHHHHHHhcCcccc-eeeEecCCCCc-ce-ecCCCccc-CCHHHHhhcCchhccCcce
Confidence            999999999999999999999999999999999965 67988764432 33 48999984 79999999999986 4599


Q ss_pred             cccCCCCCCCCCcEEEEEcCHHHHHhcCCCceEEEEEEEeecCCCCc-CCCChHHHHHHHHHHcCCCCCCccEEEecCCC
Q psy4157         353 VTAGNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTL-MGTGPIPAVNAVLAKAGWSKEEVGYFNRVATS  431 (441)
Q Consensus       353 lt~~n~~~~sDGAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~~p~~-~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~F  431 (441)
                      +|+.|++-++|||.|+|+++|++|..+|.+|.++++.+-+++.||.. +.++|.++++++|++|||+++|||+|||||+|
T Consensus       294 vtaanasfltdgasa~limteekala~gykpkaylrdflyvsqdpkdqlllgpay~ipkll~kagltlkdid~feiheaf  373 (465)
T KOG1392|consen  294 VTAANASFLTDGASAALIMTEEKALANGYKPKAYLRDFLYVSQDPKDQLLLGPAYVIPKLLDKAGLTLKDIDVFEIHEAF  373 (465)
T ss_pred             eEecccchhcCcchhhhhhhHHHHHHcCCCchHHhhhheeeccCchhheecccccccHHHHHHcCCcccccchhhhHHHH
Confidence            99999999999999999999999999999999999999999999865 67899999999999999999999999999999


Q ss_pred             hhhhh
Q psy4157         432 GGIAN  436 (441)
Q Consensus       432 t~~~~  436 (441)
                      +....
T Consensus       374 agqil  378 (465)
T KOG1392|consen  374 AGQIL  378 (465)
T ss_pred             hHHHH
Confidence            97654

>PRK09050 beta-ketoadipyl CoA thiolase; Validated

Probab=99.95  E-value=8.1e-28  Score=248.30  Aligned_cols=264  Identities=36%  Similarity=0.493  Sum_probs=173.8

Q ss_pred             CCCCCccc-ccccCcCCCcccccccc-----ccCCcccccCCCchHhhHHHHHHHhCCCHHHHhHHHHhcHHHHHHHHhC
Q psy4157           1 MSQAPHVI-NIRNGIKLNDAEMKDSM-----VFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEG   74 (441)
Q Consensus         1 mS~~P~~~-~~r~g~~~g~~~~~d~~-----~~~~l~d~~~~~~mg~~ae~~a~~~~isRe~~D~~a~~s~~ra~~a~~~   74 (441)
                      ||++||++ ..|..+.. ...+.|.+     ..+++.+.|.+..||.+||+++++||||||+||+||+.||+|+.+|+++
T Consensus       120 mS~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~Mg~~ae~~a~~~gisre~~D~~A~~S~k~a~~A~~n  198 (401)
T PRK09050        120 MSRAPFVMGKADSAFSR-QAEIFDTTIGWRFVNPLMKAQYGVDSMPETAENVAEDYNISRADQDAFALRSQQRAAAAQAA  198 (401)
T ss_pred             cccCcccccchhhhccc-CcccccccccccccCCccccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHc
Confidence            89999743 22322211 11222321     2356677788889999999999999999999999999999999999999


Q ss_pred             CCCCcceeeeEeccCCCceeeeccCCCCCCccHHHhhhcCcccccCCceecCCCCCCCCccccchhhhhcccCceeeecc
Q psy4157          75 GYFDEEIVPVVISTRKGDVVVAKDEYPKANTSVDALQKLRPVFQKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKD  154 (441)
Q Consensus        75 g~~~~ei~p~~~~~~~g~~~~~~de~~~~~~~~~~l~~l~p~f~~~g~~t~~~~~~~~dg~~~~~~~~~~~~~~~~~~~d  154 (441)
                      |+|++||+||++++++|+.                                                       ..+.+|
T Consensus       199 g~~~~ei~p~~~~~~~~~~-------------------------------------------------------~~~~~d  223 (401)
T PRK09050        199 GFLAEEIVPVTIPQKKGDP-------------------------------------------------------VVVDRD  223 (401)
T ss_pred             CCCcceeeeeeeccCCCCc-------------------------------------------------------eeeCCC
Confidence            9999999999998654431                                                       135677


Q ss_pred             cCCCCCCCHHHHhcCCCccCCCCcccCCCCCCccccchhhhhhhHHHHHhccCcchhhHHhhhcCeeEEEEeecccCCCC
Q psy4157         155 EYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQARNIQPLARIAIKSGDATAIVAGGQECMSQA  234 (441)
Q Consensus       155 ~~~~~~~~~~~~~~l~p~~~~~g~vtagn~s~~~Dgaa~~ll~s~~~a~~~gl~~~A~~~I~sG~advvla~G~E~ms~~  234 (441)
                      +++|.++|+|+|.++||+|.++|++|++|+|+++|||++++|+++++++++|+.+.++.  . |       .+.-.  ..
T Consensus       224 a~~r~~~t~e~l~~l~~~~~~~g~lt~~n~s~~~DGAaa~vl~s~~~A~~lg~~p~a~I--~-g-------~~~~~--~~  291 (401)
T PRK09050        224 EHPRPETTLEALAKLKPVFRPDGTVTAGNASGVNDGAAALLLASEAAAKKHGLTPRARI--L-G-------MATAG--VE  291 (401)
T ss_pred             CCCCCCCCHHHHhcCCCcccCCCEEeCCCcCCCcCceEEEEEecHHHHHHCCCCccEEE--E-E-------EEEec--cC
Confidence            77777788888888888887778999999999999999999999999999998765442  1 1       11100  01


Q ss_pred             ccchhcccccccCcccccchhhhcccccccccchHHHHHHHHHHHhCCCHHHHHHH----HHHHHHHHHhhhhCCCCCcc
Q psy4157         235 PHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEY----AYQSQVKTAKAQEGGYFDEE  310 (441)
Q Consensus       235 P~~~~~r~g~~~g~~~~~~d~~~~g~~~~~~~~~ma~~Ae~~a~~~Gitre~ld~~----A~~S~~~A~~A~~~g~f~~e  310 (441)
                      |..        .                   .......+++..++.|++.+|+|.|    ++....... ....|.-.+ 
T Consensus       292 ~~~--------~-------------------~~~~~~a~~~al~~Agl~~~DId~~ei~D~f~~~~l~~-~e~lg~~~~-  342 (401)
T PRK09050        292 PRI--------M-------------------GIGPAPATRKLLARLGLTIDQFDVIELNEAFAAQGLAV-LRQLGLADD-  342 (401)
T ss_pred             Ccc--------c-------------------cchHHHHHHHHHHHcCCCHHHCCccccCcHhHHHHHHH-HHHcCCCCC-
Confidence            100        0                   0012346688899999999999887    555555543 122333211 


Q ss_pred             ccceeeecCCCceeEeccCCCCCCCCHH----HHhcCCCccccCCccccCCCCCCCCCcEEE
Q psy4157         311 IVPVVISTRKGDVVVAKDEYPKANTTVE----ALQKLRPVFQKDGTVTAGNASGINDGAAAV  368 (441)
Q Consensus       311 i~Pv~v~~~~g~~~~~~D~~~r~~~t~e----~l~~~~~v~~p~G~lt~~n~~~~sDGAAAv  368 (441)
                      -.|  +|..||.+.+   .|+-..+.+.    -+..++---.+-|.+++|....+  |.+.+
T Consensus       343 ~~p--vN~~GG~la~---Ghp~gasG~~~~~e~~~qLr~~~~~~g~~~~c~~gG~--g~a~~  397 (401)
T PRK09050        343 DAR--VNPNGGAIAL---GHPLGMSGARLVLTALHQLERTGGRYALCTMCIGVGQ--GIALA  397 (401)
T ss_pred             CCC--EeCCCchHhc---CCchhHHHHHHHHHHHHHHHhcCCCeEEEEEcccccc--eeEEE
Confidence            123  4566665443   5655444333    33333221111156666665554  44443

>TIGR02430 pcaF beta-ketoadipyl CoA thiolase

Probab=99.95  E-value=5.9e-27  Score=241.74  Aligned_cols=239  Identities=35%  Similarity=0.478  Sum_probs=162.2

Q ss_pred             CCcccccCCCchHhhHHHHHHHhCCCHHHHhHHHHhcHHHHHHHHhCCCCCcceeeeEeccCCCceeeeccCCCCCCccH
Q psy4157          28 DGLTDAFHNIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTSV  107 (441)
Q Consensus        28 ~~l~d~~~~~~mg~~ae~~a~~~~isRe~~D~~a~~s~~ra~~a~~~g~~~~ei~p~~~~~~~g~~~~~~de~~~~~~~~  107 (441)
                      +++.+.|.+..||.+||+++++||||||+||+||++||+||.+|+++|+|++||+||.+++++++.              
T Consensus       151 ~~~~~~~~~~~M~~~ae~~a~~ygisre~~d~~A~~Sh~~a~~a~~~g~~~~ei~pv~vk~~~~~~--------------  216 (400)
T TIGR02430       151 PLMKALYGVDSMPETAENVAEEFGISREDQDAFALRSQQRTAAAQASGFFAEEIVPVVIPQKKGEP--------------  216 (400)
T ss_pred             cccccccccCcHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHcCCCcceEEEEEeccCCCCc--------------
Confidence            566777788899999999999999999999999999999999999999999999999987533210              


Q ss_pred             HHhhhcCcccccCCceecCCCCCCCCccccchhhhhcccCceeeecccCCCCCCCHHHHhcCCCccCCCCcccCCCCCCc
Q psy4157         108 DALQKLRPVFQKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGI  187 (441)
Q Consensus       108 ~~l~~l~p~f~~~g~~t~~~~~~~~dg~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~p~~~~~g~vtagn~s~~  187 (441)
                                                               ..+.+|+++|.++++|+|.++||+|.++|++|.+|+|++
T Consensus       217 -----------------------------------------~~~n~da~~r~~~t~e~l~~~~~v~~p~g~lt~~~~s~~  255 (400)
T TIGR02430       217 -----------------------------------------TVVDQDEHPRPETTLEGLAKLKPVVRPDGTVTAGNASGV  255 (400)
T ss_pred             -----------------------------------------eeeCCCCccCCCCCHHHHhcCCCcccCCCCEeccccCCc
Confidence                                                     135678888878889999999999887899999999999


Q ss_pred             cccchhhhhhhHHHHHhccCcchhhHHhhhcCeeEEEEeecccCCCCccchhcccccccCcccccchhhhcccccccccc
Q psy4157         188 NDGAAAVLLMSYKRAQARNIQPLARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNI  267 (441)
Q Consensus       188 ~Dgaa~~ll~s~~~a~~~gl~~~A~~~I~sG~advvla~G~E~ms~~P~~~~~r~g~~~g~~~~~~d~~~~g~~~~~~~~  267 (441)
                      +|||++++|++++.++++|..+.++.  . |       .+.-.  ..|...                           ..
T Consensus       256 ~DGAaa~vl~s~e~A~~~g~~~~~~I--~-g-------~~~~~--~~~~~~---------------------------~~  296 (400)
T TIGR02430       256 NDGAAALLLASEEAVQRHGLTPRARI--L-A-------AATAG--VEPRIM---------------------------GI  296 (400)
T ss_pred             CCceEEEEEecHHHHHHCCCCccEEE--E-E-------EEEec--CCCccc---------------------------cc
Confidence            99999999999999999997665542  1 1       11100  111000                           01


Q ss_pred             hHHHHHHHHHHHhCCCHHHHHHH----HHHHHHHHHhhhhCCCCCccccceeeecCCCceeEeccCCCCCCCCHHHH---
Q psy4157         268 HMGITAENIAKKWSISRLEQDEY----AYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEAL---  340 (441)
Q Consensus       268 ~ma~~Ae~~a~~~Gitre~ld~~----A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~g~~~~~~D~~~r~~~t~e~l---  340 (441)
                      .....+++..++.|++.+|+|.|    ++.....+.. ...|.-.+ -.|  +|..||.+.+   .|+-..+.+..+   
T Consensus       297 ~~~~a~~~al~~Agl~~~DID~~ei~D~f~~~~l~~~-e~lG~~~~-~~p--vN~~GG~la~---GHp~gasG~~~~~e~  369 (400)
T TIGR02430       297 GPVPATQKLLARAGLSIDQFDVIELNEAFAAQALAVL-RELGLADD-DAR--VNPNGGAIAL---GHPLGASGARLVLTA  369 (400)
T ss_pred             hHHHHHHHHHHHhCCCHHHCCCcccCcHHHHHHHHHH-HHcCCCCC-CCe--ECCCCchHhc---cChHHHHHHHHHHHH
Confidence            12346688889999999999877    5555554431 12232111 123  4555664433   455444333333   


Q ss_pred             -hcCCCccccCCccccCCCCCCCCCcEEEE
Q psy4157         341 -QKLRPVFQKDGTVTAGNASGINDGAAAVL  369 (441)
Q Consensus       341 -~~~~~v~~p~G~lt~~n~~~~sDGAAAvV  369 (441)
                       ..++---.+-|.+++|....+  |.+.+|
T Consensus       370 ~~qLr~~~~~~g~~~~c~~gG~--g~a~~~  397 (400)
T TIGR02430       370 LRQLERSGGRYALCTMCIGVGQ--GIALAI  397 (400)
T ss_pred             HHHHHhcCCCEEEEEEccccCh--hhEEEE
Confidence             223211111156666665555  554444

Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.

>PRK08235 acetyl-CoA acetyltransferase; Provisional

Probab=99.94  E-value=9.8e-27  Score=239.94  Aligned_cols=258  Identities=38%  Similarity=0.568  Sum_probs=177.8

Q ss_pred             CCCCCccc-ccccCcCCCccccccccccCCcccccCCCchHhhHHHHHHHhCCCHHHHhHHHHhcHHHHHHHHhCCCCCc
Q psy4157           1 MSQAPHVI-NIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDE   79 (441)
Q Consensus         1 mS~~P~~~-~~r~g~~~g~~~~~d~~~~~~l~d~~~~~~mg~~ae~~a~~~~isRe~~D~~a~~s~~ra~~a~~~g~~~~   79 (441)
                      ||+.||+. ..|++.++++..+.+.+.++++++.+.+..||.+||+++++||||||+||+||++||+||++|+++|+|++
T Consensus       118 ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~ygitre~~d~~avksh~~a~~a~~~g~~~~  197 (393)
T PRK08235        118 MSNAPYILPGARWGYRMGDNEVIDLMVADGLTCAFSGVHMGVYGGEVAKELGISREAQDEWAYRSHQRAVSAHEEGRFEE  197 (393)
T ss_pred             cccCcccccccccccccCCchhhhhhcccccccccCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCCc
Confidence            79999754 24545555543344444556777777777899999999999999999999999999999999999999999


Q ss_pred             ceeeeEeccCCCceeeeccCCCCCCccHHHhhhcCcccccCCceecCCCCCCCCccccchhhhhcccCceeeecccCCCC
Q psy4157          80 EIVPVVISTRKGDVVVAKDEYPKANTSVDALQKLRPVFQKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEYPKA  159 (441)
Q Consensus        80 ei~p~~~~~~~g~~~~~~de~~~~~~~~~~l~~l~p~f~~~g~~t~~~~~~~~dg~~~~~~~~~~~~~~~~~~~d~~~~~  159 (441)
                      ||+||++++++|+.                                                       ..+.+|+++|.
T Consensus       198 ei~pv~~~~~~~~~-------------------------------------------------------~~~~~da~~r~  222 (393)
T PRK08235        198 EIVPVTIPQRKGDP-------------------------------------------------------IVVAKDEAPRK  222 (393)
T ss_pred             eEeeeEecCCCCCc-------------------------------------------------------eEeCCCCCCCC
Confidence            99999997655431                                                       23567777777


Q ss_pred             CCCHHHHhcCCCccCCCCcccCCCCCCccccchhhhhhhHHHHHhccCcchhhHHhhhcCeeEEEEeecccCCCCccchh
Q psy4157         160 NTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQARNIQPLARIAIKSGDATAIVAGGQECMSQAPHVIN  239 (441)
Q Consensus       160 ~~~~~~~~~l~p~~~~~g~vtagn~s~~~Dgaa~~ll~s~~~a~~~gl~~~A~~~I~sG~advvla~G~E~ms~~P~~~~  239 (441)
                      ++|+|++.++||+|.++|++|.+|+|+++|||+++||++++++++++..+.++.   .|       .+.  .+..|.   
T Consensus       223 ~~t~e~~~~~~~v~~p~g~lt~~~~~~~~DGAaa~vl~s~~~A~~~~~~p~~~i---~g-------~~~--~~~~~~---  287 (393)
T PRK08235        223 DTTIEKLAKLKPVFDKTGTITAGNAPGVNDGAAALVLMSEDRAKQEGRKPLATI---LA-------HTA--IAVEAK---  287 (393)
T ss_pred             CCCHHHHhcCCCcccCCCcEeccccCCCCCceEEEEEecHHHHHHCCCCceEEE---EE-------EEe--cccChh---
Confidence            788888888888888888999999999999999999999999999998775432   11       100  000000   


Q ss_pred             cccccccCcccccchhhhcccccccccchHHHHHHHHHHHhCCCHHHHHHH----HHHHHHHHHhhhhCCCCCcccccee
Q psy4157         240 IRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEY----AYQSQVKTAKAQEGGYFDEEIVPVV  315 (441)
Q Consensus       240 ~r~g~~~g~~~~~~d~~~~g~~~~~~~~~ma~~Ae~~a~~~Gitre~ld~~----A~~S~~~A~~A~~~g~f~~ei~Pv~  315 (441)
                                    +.          .......+++..++.|++.+|+|.|    ++.....+.. ...|..     +..
T Consensus       288 --------------~~----------~~~~~~a~~~al~~agl~~~did~~e~~d~f~~~~l~~~-e~lg~~-----~~p  337 (393)
T PRK08235        288 --------------DF----------PRTPGYAINALLEKTGKTVEDIDLFEINEAFAAVALAST-EIAGID-----PEK  337 (393)
T ss_pred             --------------hh----------cchHHHHHHHHHHHhCCCHHHCCeehhcchhHHHHHHHH-HHhCCC-----ccc
Confidence                          00          0011346788889999999998876    5555555431 122332     223


Q ss_pred             eecCCCceeEeccCCCCCCCCHHHHhcCCCccc----cCCccccCCCCCC
Q psy4157         316 ISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQ----KDGTVTAGNASGI  361 (441)
Q Consensus       316 v~~~~g~~~~~~D~~~r~~~t~e~l~~~~~v~~----p~G~lt~~n~~~~  361 (441)
                      +|..+|.+.+   .||-..+.+.++..+-.-+.    +-|..+.|+..++
T Consensus       338 vN~~GG~la~---Ghp~gasG~~~~~~l~~qL~~~~~~~g~~~~c~~gG~  384 (393)
T PRK08235        338 VNVNGGAVAL---GHPIGASGARIIVTLIHELKRRGGGIGIAAICSGGGQ  384 (393)
T ss_pred             CCcCCchHHh---CCcHHHHHHHHHHHHHHHHHhcCCCeEEEEEcccccc
Confidence            4666666544   56666666655544333222    1145556554443

>PRK05656 acetyl-CoA acetyltransferase; Provisional

Probab=99.94  E-value=5.9e-27  Score=241.69  Aligned_cols=265  Identities=40%  Similarity=0.565  Sum_probs=176.2

Q ss_pred             CCCCCccc-ccccCcCCCccccccccccCCcccccCCCchHhhHHHHHHHhCCCHHHHhHHHHhcHHHHHHHHhCCCCCc
Q psy4157           1 MSQAPHVI-NIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDE   79 (441)
Q Consensus         1 mS~~P~~~-~~r~g~~~g~~~~~d~~~~~~l~d~~~~~~mg~~ae~~a~~~~isRe~~D~~a~~s~~ra~~a~~~g~~~~   79 (441)
                      ||++||+. ..|.+.++++....+.+..+++++.+.+..|+.+||+++++||||||+||+||+.||+||++|+..|+|++
T Consensus       118 ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~~~~~~gitre~~d~~Av~sh~~a~~a~~~a~~~~  197 (393)
T PRK05656        118 MSLAPYVLPGARTGLRMGHAQLVDSMITDGLWDAFNDYHMGITAENLVEKYGISREAQDAFAAASQQKAVAAIEAGRFDD  197 (393)
T ss_pred             hccCccccccccccccccchhhhhhhccccccccccCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcc
Confidence            79999753 33555555543333333346667766667899999999999999999999999999999999999999999


Q ss_pred             ceeeeEeccCCCceeeeccCCCCCCccHHHhhhcCcccccCCceecCCCCCCCCccccchhhhhcccCceeeecccCCCC
Q psy4157          80 EIVPVVISTRKGDVVVAKDEYPKANTSVDALQKLRPVFQKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEYPKA  159 (441)
Q Consensus        80 ei~p~~~~~~~g~~~~~~de~~~~~~~~~~l~~l~p~f~~~g~~t~~~~~~~~dg~~~~~~~~~~~~~~~~~~~d~~~~~  159 (441)
                      ||+||++.+..+..                                                       ..+.+||++|+
T Consensus       198 ei~pv~~~~~~~~~-------------------------------------------------------~~~~~D~~~r~  222 (393)
T PRK05656        198 EITPILIPQRKGEP-------------------------------------------------------LAFATDEQPRA  222 (393)
T ss_pred             eeeeEEeccCCCCc-------------------------------------------------------eEeccCCCCCC
Confidence            99999886532221                                                       23467788887


Q ss_pred             CCCHHHHhcCCCccCCCCcccCCCCCCccccchhhhhhhHHHHHhccCcchhhHHhhhcCeeEEEEeecccCCCCccchh
Q psy4157         160 NTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQARNIQPLARIAIKSGDATAIVAGGQECMSQAPHVIN  239 (441)
Q Consensus       160 ~~~~~~~~~l~p~~~~~g~vtagn~s~~~Dgaa~~ll~s~~~a~~~gl~~~A~~~I~sG~advvla~G~E~ms~~P~~~~  239 (441)
                      ++++|.|++|||+|.++|++|++|+|+++|||+++||++++.++++|..+.++.  . |       .+.-  ...|..  
T Consensus       223 ~~~~e~l~~l~p~~~~~g~lt~~~~s~~~DGAaa~vl~s~~~A~~~g~~~~a~i--~-g-------~~~~--~~~~~~--  288 (393)
T PRK05656        223 GTTAESLAKLKPAFKKDGSVTAGNASSLNDGAAAVLLMSAAKAKALGLPVLAKI--A-A-------YANA--GVDPAI--  288 (393)
T ss_pred             CCCHHHHhcCCCCcCCCCCEEccccCCCCCceEEEEEecHHHHHHCCCCeeEEE--E-E-------EEEe--cCCCcc--
Confidence            888888888888887788999999999999999999999999999998765442  1 1       1100  001100  


Q ss_pred             cccccccCcccccchhhhcccccccccchHHHHHHHHHHHhCCCHHHHHHH----HHHHHHHHHhhhhCCCCCcccccee
Q psy4157         240 IRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEY----AYQSQVKTAKAQEGGYFDEEIVPVV  315 (441)
Q Consensus       240 ~r~g~~~g~~~~~~d~~~~g~~~~~~~~~ma~~Ae~~a~~~Gitre~ld~~----A~~S~~~A~~A~~~g~f~~ei~Pv~  315 (441)
                                               ........+++..++.|++.+|+|.|    ++.....+.. ...|. ..+  |  
T Consensus       289 -------------------------~~~~~~~a~~~al~~agl~~~dId~~e~~d~f~~~~~~~~-e~lg~-~~~--~--  337 (393)
T PRK05656        289 -------------------------MGIGPVSATRRCLDKAGWSLAELDLIEANEAFAAQSLAVG-KELGW-DAA--K--  337 (393)
T ss_pred             -------------------------cchhHHHHHHHHHHHcCCCHHHCCEEEecCccHHHHHHHH-HHhCC-CCc--c--
Confidence                                     00112346688888999999998876    3334433321 11222 111  3  


Q ss_pred             eecCCCceeEeccCCCCCCCCHHHHhcCCCccc-cC---CccccCCCCCCCCCcEEEEEc
Q psy4157         316 ISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQ-KD---GTVTAGNASGINDGAAAVLLM  371 (441)
Q Consensus       316 v~~~~g~~~~~~D~~~r~~~t~e~l~~~~~v~~-p~---G~lt~~n~~~~sDGAAAvVLa  371 (441)
                      +|..+|...+   .|+-..+....+..+-..+. .+   |..+.|...++   +.|+||-
T Consensus       338 vn~~Gg~~a~---GHp~gAsG~~~~~~l~~~l~~~~~~~gl~~~c~~gG~---g~a~~~e  391 (393)
T PRK05656        338 VNVNGGAIAL---GHPIGASGCRVLVTLLHEMIRRDAKKGLATLCIGGGQ---GVALAIE  391 (393)
T ss_pred             CCcCCCHHHh---CccHHHHHHHHHHHHHHHHHHcCCCEEEEEEcccCcc---eEEEEEe
Confidence            3555555444   56666666665554433332 12   45565555544   4455553

>PRK09051 beta-ketothiolase; Provisional

Probab=99.94  E-value=2.1e-26  Score=237.41  Aligned_cols=155  Identities=55%  Similarity=0.820  Sum_probs=123.6

Q ss_pred             CCCCCccc-ccccCcCCCccccccccccCCcccccCCCchHhhHHHHHHHhCCCHHHHhHHHHhcHHHHHHHHhCCCCCc
Q psy4157           1 MSQAPHVI-NIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDE   79 (441)
Q Consensus         1 mS~~P~~~-~~r~g~~~g~~~~~d~~~~~~l~d~~~~~~mg~~ae~~a~~~~isRe~~D~~a~~s~~ra~~a~~~g~~~~   79 (441)
                      ||++|++. ..|++.++++.+..|.+ .+++.+++.+..||.+||+++++||||||+||+||+.||+||++|+++|+|++
T Consensus       120 mS~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~a~~~~~~ygitre~~d~~avksh~~A~~a~~~g~~~~  198 (394)
T PRK09051        120 MSRAPYLLPAARWGARMGDAKLVDMM-VGALHDPFGTIHMGVTAENVAAKYGISREAQDALALESHRRAAAAIAAGYFKD  198 (394)
T ss_pred             cccCcccccccccccccCCchhhhhh-cccccccccCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcc
Confidence            79999743 34555455543333433 24556666666899999999999999999999999999999999999999999


Q ss_pred             ceeeeEeccCCCceeeeccCCCCCCccHHHhhhcCcccccCCceecCCCCCCCCccccchhhhhcccCceeeecccCCCC
Q psy4157          80 EIVPVVISTRKGDVVVAKDEYPKANTSVDALQKLRPVFQKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEYPKA  159 (441)
Q Consensus        80 ei~p~~~~~~~g~~~~~~de~~~~~~~~~~l~~l~p~f~~~g~~t~~~~~~~~dg~~~~~~~~~~~~~~~~~~~d~~~~~  159 (441)
                      ||+||.++++++..                                                        .+.+|+++|.
T Consensus       199 ei~p~~~~~~~~~~--------------------------------------------------------~~~~da~~r~  222 (394)
T PRK09051        199 QIVPVEIKTRKGEV--------------------------------------------------------VFDTDEHVRA  222 (394)
T ss_pred             eeeeeeecCCCCCe--------------------------------------------------------EECCCCCCCC
Confidence            99999997654432                                                        3456666666


Q ss_pred             CCCHHHHhcCCCccCCC-CcccCCCCCCccccchhhhhhhHHHHHhccCcchhh
Q psy4157         160 NTTVEALQKLRPVFQKD-GTVTAGNASGINDGAAAVLLMSYKRAQARNIQPLAR  212 (441)
Q Consensus       160 ~~~~~~~~~l~p~~~~~-g~vtagn~s~~~Dgaa~~ll~s~~~a~~~gl~~~A~  212 (441)
                      ++|+|+|.++||+|.++ |.+|++|+|+++|||+++||++++.++++|..+.++
T Consensus       223 ~~t~e~v~~~~~v~~~~~g~lt~~~~s~~~DGAaa~vl~s~~~a~~~g~~~~~~  276 (394)
T PRK09051        223 DTTLEDLAKLKPVFKKENGTVTAGNASGINDGAAAVVLAEADAAEARGLKPLAR  276 (394)
T ss_pred             CCCHHHHcCCCCcccCCCccEeCCcCCCCCCceEEEEEecHHHHHHCCCCccEE
Confidence            77777777777777655 789999999999999999999999999999877544

>PRK06205 acetyl-CoA acetyltransferase; Provisional

Probab=99.94  E-value=8.7e-26  Score=233.79  Aligned_cols=267  Identities=33%  Similarity=0.431  Sum_probs=173.7

Q ss_pred             CCCCCccc-ccccCcCCCccccccccccCCcc---ccc-CCCchHhhHHHHHHHhCCCHHHHhHHHHhcHHHHHHHHhCC
Q psy4157           1 MSQAPHVI-NIRNGIKLNDAEMKDSMVFDGLT---DAF-HNIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGG   75 (441)
Q Consensus         1 mS~~P~~~-~~r~g~~~g~~~~~d~~~~~~l~---d~~-~~~~mg~~ae~~a~~~~isRe~~D~~a~~s~~ra~~a~~~g   75 (441)
                      ||+.|+.. ..|++.++++....+.+..+.+.   +.+ ...+|+++||+++++||||||+||+||+.||++|.+|++.|
T Consensus       118 ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~a~~~~~~~gitre~~~~~Av~sh~~A~~a~~~g  197 (404)
T PRK06205        118 MSNVEFYTTDMRWGVRGGGVQLHDRLARGRETAGGRRFPVPGGMIETAENLRREYGISREEQDALAVRSHQRAVAAQEAG  197 (404)
T ss_pred             hccCcccccccccccccCcchhhhhhccCcccccccccCCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcC
Confidence            78888543 44555555543333443333332   222 35689999999999999999999999999999999999999


Q ss_pred             CCCcceeeeEeccCCCceeeeccCCCCCCccHHHhhhcCcccccCCceecCCCCCCCCccccchhhhhcccCceeeeccc
Q psy4157          76 YFDEEIVPVVISTRKGDVVVAKDEYPKANTSVDALQKLRPVFQKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDE  155 (441)
Q Consensus        76 ~~~~ei~p~~~~~~~g~~~~~~de~~~~~~~~~~l~~l~p~f~~~g~~t~~~~~~~~dg~~~~~~~~~~~~~~~~~~~d~  155 (441)
                      +|++||+||++++++|+.                                                       ..+.+|+
T Consensus       198 ~~~~ei~pv~~~~~~~~~-------------------------------------------------------~~~~~da  222 (404)
T PRK06205        198 RFDDEIVPVTVPQRKGDP-------------------------------------------------------TVVDRDE  222 (404)
T ss_pred             CCcceeeeeEecCCCCCc-------------------------------------------------------eEeccCC
Confidence            999999999998755431                                                       1245566


Q ss_pred             CCCCCCCHHHHhcCCCccC---CCCcccCCCCCCccccchhhhhhhHHHHHhccCcchhhHHhhhcCeeEEEEeecccCC
Q psy4157         156 YPKANTTVEALQKLRPVFQ---KDGTVTAGNASGINDGAAAVLLMSYKRAQARNIQPLARIAIKSGDATAIVAGGQECMS  232 (441)
Q Consensus       156 ~~~~~~~~~~~~~l~p~~~---~~g~vtagn~s~~~Dgaa~~ll~s~~~a~~~gl~~~A~~~I~sG~advvla~G~E~ms  232 (441)
                      ++|.++|+|++.++||+|.   ++|++|.+|+|+++|||+++||++++++++++..+.++.  . |....         +
T Consensus       223 ~~r~~~t~e~~~~~~~v~~~~~p~g~lt~~~~~~~~DGAaa~vl~se~~A~~~~~~p~~~i--~-g~~~~---------~  290 (404)
T PRK06205        223 HPRADTTLESLAKLRPIMGKQDPEATVTAGNASGQNDAAAACLVTTEDKAEELGLRPLARL--V-SWAVA---------G  290 (404)
T ss_pred             CCCCCCCHHHHhcCCCcCccCCCCCceeCcccCCCCCceeEEEEecHHHHHHCCCCceEEE--E-EEEEe---------c
Confidence            6666677777777777773   568899999999999999999999999999998765432  1 11100         0


Q ss_pred             CCccchhcccccccCcccccchhhhcccccccccchHHHHHHHHHHHhCCCHHHHHHH----HHHHHHHHHhhhhCCCCC
Q psy4157         233 QAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEY----AYQSQVKTAKAQEGGYFD  308 (441)
Q Consensus       233 ~~P~~~~~r~g~~~g~~~~~~d~~~~g~~~~~~~~~ma~~Ae~~a~~~Gitre~ld~~----A~~S~~~A~~A~~~g~f~  308 (441)
                      ..|..                           ........+++..++.|++.+|+|.|    ++..+..+.. ...|.-.
T Consensus       291 ~~~~~---------------------------~~~~~~~a~~~al~~Agl~~~Did~~ei~d~f~~~~l~~~-e~lg~~~  342 (404)
T PRK06205        291 VEPSR---------------------------MGIGPVPATEKALARAGLTLDDIDLIELNEAFAAQVLAVL-KEWGFGA  342 (404)
T ss_pred             cCCcc---------------------------ccccHHHHHHHHHHHcCCCHHHCCEeeeccHHHHHHHHHH-HHhCcCc
Confidence            01100                           00122456788888999999998876    5666555531 1223221


Q ss_pred             ccccceeeecCCCceeEeccCCCCCCCCHHHHhcCCCcccc-C---CccccCCCCCCCCCcEEEEE
Q psy4157         309 EEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQK-D---GTVTAGNASGINDGAAAVLL  370 (441)
Q Consensus       309 ~ei~Pv~v~~~~g~~~~~~D~~~r~~~t~e~l~~~~~v~~p-~---G~lt~~n~~~~sDGAAAvVL  370 (441)
                      +...|  +|..+|.+.+   .||-..+.+..+..+-.-+.. +   |..+.|.....   +.|+||
T Consensus       343 ~~~~~--vN~~GG~la~---Ghp~gatG~~~v~e~~~qL~~~~~~~gl~~~c~~gg~---g~a~~~  400 (404)
T PRK06205        343 DDEER--LNVNGSGISL---GHPVGATGGRILATLLRELQRRQARYGLETMCIGGGQ---GLAAVF  400 (404)
T ss_pred             ccCCC--cCCCCCHHhh---CCChhhhHHHHHHHHHHHHHhcCCCeEEEEEeccCCh---hhEEEE
Confidence            11113  5667776554   677666666555443322221 1   45555554444   445554

>PRK06504 acetyl-CoA acetyltransferase; Provisional

Probab=99.93  E-value=3.9e-26  Score=235.07  Aligned_cols=230  Identities=25%  Similarity=0.335  Sum_probs=161.3

Q ss_pred             CCCCCcccc--cccCcCCCccccccccccCCcccccC--CCchHhhHHHHHHHhCCCHHHHhHHHHhcHHHHHHHHhCCC
Q psy4157           1 MSQAPHVIN--IRNGIKLNDAEMKDSMVFDGLTDAFH--NIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGY   76 (441)
Q Consensus         1 mS~~P~~~~--~r~g~~~g~~~~~d~~~~~~l~d~~~--~~~mg~~ae~~a~~~~isRe~~D~~a~~s~~ra~~a~~~g~   76 (441)
                      ||++|+...  .|++.++++..      .+++++.+.  +.+|+.++|+++++||||||+||+||++||+||.+|+++|+
T Consensus       119 mS~~p~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~aae~~a~~ygisre~~d~~A~ksh~~A~~a~~ag~  192 (390)
T PRK06504        119 MTRVPMGSPSTLPAKNGLGHYK------SPGMEERYPGIQFSQFTGAEMMAKKYGLSKDQLDEFALQSHQRAIAATQAGK  192 (390)
T ss_pred             cCCCcccccccccccccccccc------ccccccccCCCCCCHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHhHHcCC
Confidence            899997532  24444444311      155555443  55899999999999999999999999999999999999999


Q ss_pred             CCcceeeeEeccCCCceeeeccCCCCCCccHHHhhhcCcccccCCceecCCCCCCCCccccchhhhhcccCceeeecccC
Q psy4157          77 FDEEIVPVVISTRKGDVVVAKDEYPKANTSVDALQKLRPVFQKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEY  156 (441)
Q Consensus        77 ~~~ei~p~~~~~~~g~~~~~~de~~~~~~~~~~l~~l~p~f~~~g~~t~~~~~~~~dg~~~~~~~~~~~~~~~~~~~d~~  156 (441)
                      |++||+||++++++|+.                                                       ..+.+||+
T Consensus       193 f~~ei~p~~~~~~~~~~-------------------------------------------------------~~~~~De~  217 (390)
T PRK06504        193 FKAEIVPLEITRADGSG-------------------------------------------------------EMHTVDEG  217 (390)
T ss_pred             CccccccccccCCCCCc-------------------------------------------------------eEEccCCC
Confidence            99999999987654321                                                       24667888


Q ss_pred             CCCCCCHHHHhcCCCccCCCCcccCCCCCCccccchhhhhhhHHHHHhccCcchhhHHhhhcCeeEEEEeecccCCCCcc
Q psy4157         157 PKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQARNIQPLARIAIKSGDATAIVAGGQECMSQAPH  236 (441)
Q Consensus       157 ~~~~~~~~~~~~l~p~~~~~g~vtagn~s~~~Dgaa~~ll~s~~~a~~~gl~~~A~~~I~sG~advvla~G~E~ms~~P~  236 (441)
                      +|.++|+|+|.++||++ ++|++|++|+|+++|||+++||+|+++++++++.+.++  |.    ...+. +.+     |.
T Consensus       218 ~r~~~t~e~l~~~~~~~-~~g~lt~~n~s~~~DGAaA~vl~s~~~A~~l~~~p~~~--i~----~~~~~-~~~-----~~  284 (390)
T PRK06504        218 IRFDATLEGIAGVKLIA-EGGRLTAATASQICDGASGVMVVNERGLKALGVKPLAR--IH----HMTVI-GGD-----PV  284 (390)
T ss_pred             CCCCCCHHHHhcCCCCC-CCCCCcCccCCCCCCceEEEEEecHHHHHHcCCCceEE--EE----EEEEe-ecC-----ch
Confidence            88888899999999985 46899999999999999999999999999999877543  11    00000 000     00


Q ss_pred             chhcccccccCcccccchhhhcccccccccchHHHHHHHHHHHhCCCHHHHHHH----HHHHHHHHHhhhhCCCCCcccc
Q psy4157         237 VINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEY----AYQSQVKTAKAQEGGYFDEEIV  312 (441)
Q Consensus       237 ~~~~r~g~~~g~~~~~~d~~~~g~~~~~~~~~ma~~Ae~~a~~~Gitre~ld~~----A~~S~~~A~~A~~~g~f~~ei~  312 (441)
                      .                  +         .......+++..++.|++.+|+|.|    ++........ ...|.- .+  
T Consensus       285 ~------------------~---------~~~~~~a~~~a~~~agl~~~Did~~Ei~d~Fa~~~l~~~-e~lG~~-~~--  333 (390)
T PRK06504        285 I------------------M---------LEAPLPATERALKKAGMKIDDIDLYEVNEAFASVPLAWL-KATGAD-PE--  333 (390)
T ss_pred             h------------------h---------hccHHHHHHHHHHHcCCCHHHCCEEEecccchHHHHHHH-HHhCCC-CC--
Confidence            0                  0         0011235788888999999998877    5555555431 223432 21  


Q ss_pred             ceeeecCCCceeEeccCCCCCCCCHHHH
Q psy4157         313 PVVISTRKGDVVVAKDEYPKANTTVEAL  340 (441)
Q Consensus       313 Pv~v~~~~g~~~~~~D~~~r~~~t~e~l  340 (441)
                        .+|..+|.+..   .||-..+...++
T Consensus       334 --pvN~~GG~la~---Ghp~gatG~r~~  356 (390)
T PRK06504        334 --RLNVNGGAIAL---GHPLGASGTKLM  356 (390)
T ss_pred             --CcCCCCcHHhc---CCCcchhHHHHH
Confidence              35667776555   677766674433

>PRK06954 acetyl-CoA acetyltransferase; Provisional

Probab=99.93  E-value=9.5e-26  Score=232.96  Aligned_cols=262  Identities=31%  Similarity=0.477  Sum_probs=177.5

Q ss_pred             CCCCCccc-ccccCcCCCccccccccccCCcccccC-CCchHhhHHHHHHHhCCCHHHHhHHHHhcHHHHHHHHhCCCCC
Q psy4157           1 MSQAPHVI-NIRNGIKLNDAEMKDSMVFDGLTDAFH-NIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFD   78 (441)
Q Consensus         1 mS~~P~~~-~~r~g~~~g~~~~~d~~~~~~l~d~~~-~~~mg~~ae~~a~~~~isRe~~D~~a~~s~~ra~~a~~~g~~~   78 (441)
                      ||++|++. ..|.+.++++....+.+..+.+.+.+. +..||.+||+++++||||||+||+||++||++|.+|+..|+|+
T Consensus       123 ms~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ygitre~~d~~A~~s~~~a~~a~~~~~~~  202 (397)
T PRK06954        123 MTNAPYLLPKARGGMRMGHGQVLDHMFLDGLEDAYDKGRLMGTFAEECAGEYGFTREAQDAFAIESLARAKRANEDGSFA  202 (397)
T ss_pred             cCCCcccCcccccccccCcchhhhhhcccccccccccCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence            78889753 234455555433334444566655553 6789999999999999999999999999999999999999999


Q ss_pred             cceeeeEeccCCCceeeeccCCCCCCccHHHhhhcCcccccCCceecCCCCCCCCccccchhhhhcccCceeeecccCCC
Q psy4157          79 EEIVPVVISTRKGDVVVAKDEYPKANTSVDALQKLRPVFQKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEYPK  158 (441)
Q Consensus        79 ~ei~p~~~~~~~g~~~~~~de~~~~~~~~~~l~~l~p~f~~~g~~t~~~~~~~~dg~~~~~~~~~~~~~~~~~~~d~~~~  158 (441)
                      +||+||++.+.++.                                                        ..+++||+||
T Consensus       203 ~~~~pv~v~~~~~~--------------------------------------------------------~~v~~D~~pr  226 (397)
T PRK06954        203 WEIAPVTVAGKKGD--------------------------------------------------------TVIDRDEQPF  226 (397)
T ss_pred             ceEeeEEeccCCCC--------------------------------------------------------eEeccCCCcC
Confidence            99999998653322                                                        2367888888


Q ss_pred             CCCCHHHHhcCCCccCCCCcccCCCCCCccccchhhhhhhHHHHHhccCcchhhHHhhhcCeeEEEEeecccCCCCccch
Q psy4157         159 ANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQARNIQPLARIAIKSGDATAIVAGGQECMSQAPHVI  238 (441)
Q Consensus       159 ~~~~~~~~~~l~p~~~~~g~vtagn~s~~~Dgaa~~ll~s~~~a~~~gl~~~A~~~I~sG~advvla~G~E~ms~~P~~~  238 (441)
                       ++++|+|++|+|+|.++|++|.+|+|+++|||+++||+++++++++|+.+.++.  . |       .+.  ....|.  
T Consensus       227 -~~~~~~l~~l~~~f~~~g~lt~~~~~~~~DGAaa~vl~s~~~a~~~~~~p~~~i--~-g-------~~~--~~~~~~--  291 (397)
T PRK06954        227 -KANPEKIPTLKPAFSKTGTVTAANSSSISDGAAALVMMRASTAKRLGLAPLARV--V-G-------HST--FAQAPS--  291 (397)
T ss_pred             -CCCHHHHhCCCCccCCCCcEEccccCCCCCceEEEEEecHHHHHHCCCCceEEE--E-E-------EEe--cccCcc--
Confidence             588999999999998889999999999999999999999999999998775431  1 1       110  000000  


Q ss_pred             hcccccccCcccccchhhhcccccccccchHHHHHHHHHHHhCCCHHHHHHH----HHHHHHHHHhhhhCCCCCccccce
Q psy4157         239 NIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEY----AYQSQVKTAKAQEGGYFDEEIVPV  314 (441)
Q Consensus       239 ~~r~g~~~g~~~~~~d~~~~g~~~~~~~~~ma~~Ae~~a~~~Gitre~ld~~----A~~S~~~A~~A~~~g~f~~ei~Pv  314 (441)
                                     +.     .     ......+++..++.|++.+|+|.|    ++....... ..+.|. ..    .
T Consensus       292 ---------------~~-----~-----~~~~~a~~~al~~agl~~~Did~~ei~d~fa~~~l~~-~e~lg~-~~----~  340 (397)
T PRK06954        292 ---------------KF-----T-----TAPVGAIRKLFEKNGWRAAEVDLFEINEAFAVVTMAA-MKEHGL-PH----E  340 (397)
T ss_pred             ---------------cc-----c-----chHHHHHHHHHHHcCCCHHHCCEEehhhHHHHHHHHH-HHHhCC-Cc----c
Confidence                           00     0     011346788899999999998877    444444442 112343 22    2


Q ss_pred             eeecCCCceeEeccCCCCCCCCHHHHhcCCCccc----cCCccccCCCCCCCCCcEEEE
Q psy4157         315 VISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQ----KDGTVTAGNASGINDGAAAVL  369 (441)
Q Consensus       315 ~v~~~~g~~~~~~D~~~r~~~t~e~l~~~~~v~~----p~G~lt~~n~~~~sDGAAAvV  369 (441)
                      .+|..+|.+.+   .||-..+.+.++..+-.-+.    +-++.++|...+.  |++.+|
T Consensus       341 ~vN~~GG~~a~---Ghp~gasG~~~~~~~~~qL~~~~g~~~v~~~c~~gg~--g~a~~~  394 (397)
T PRK06954        341 KVNVNGGACAL---GHPIGASGARILVTLIGALRARGGKRGVASLCIGGGE--ATAMGI  394 (397)
T ss_pred             cCCcCCChHHh---cccHHHHHHHHHHHHHHHHHhcCCCeEEEEEccccch--hhEEEE
Confidence            34666666544   57766665554443332222    1246666655554  554444

>PRK07850 acetyl-CoA acetyltransferase; Provisional

Probab=99.93  E-value=1.9e-25  Score=229.90  Aligned_cols=231  Identities=29%  Similarity=0.359  Sum_probs=158.4

Q ss_pred             CCchHhhHHHHHHHhCCCHHHHhHHHHhcHHHHHHHHhCCCCCcceeeeEeccC--CCceeeeccCCCCCCccHHHhhhc
Q psy4157          36 NIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTR--KGDVVVAKDEYPKANTSVDALQKL  113 (441)
Q Consensus        36 ~~~mg~~ae~~a~~~~isRe~~D~~a~~s~~ra~~a~~~g~~~~ei~p~~~~~~--~g~~~~~~de~~~~~~~~~~l~~l  113 (441)
                      ...|+.+||+++++||||||+||+||++||+||++|+++|+|++||+||++++.  ++++                    
T Consensus       144 ~~~m~~~ae~~~~~ygisre~~d~~a~~sh~~a~~A~~~g~f~~ei~pv~~~~~~~~~np--------------------  203 (387)
T PRK07850        144 MPNQFEAAERIAKRRGITREDVDAFGLRSQRRAAQAWAEGRFDREISPVQAPVLDEEGQP--------------------  203 (387)
T ss_pred             cchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeEeeccccccccc--------------------
Confidence            457999999999999999999999999999999999999999999999998742  1110                    


Q ss_pred             CcccccCCceecCCCCCCCCccccchhhhhcccCceeeecccCCCCCCCHHHHhcCCCccCCCCcccCCCCCCccccchh
Q psy4157         114 RPVFQKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAA  193 (441)
Q Consensus       114 ~p~f~~~g~~t~~~~~~~~dg~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~p~~~~~g~vtagn~s~~~Dgaa~  193 (441)
                            .+.                         -..++.||++| ++|+|+|.+|+|+| ++|++|++|+|+++|||++
T Consensus       204 ------~~~-------------------------~~~~~~D~~~r-~~t~e~l~~l~p~~-~~~~~t~~~~~~~sDGAaa  250 (387)
T PRK07850        204 ------TGE-------------------------TRLVTRDQGLR-DTTMEGLAGLKPVL-EGGIHTAGTSSQISDGAAA  250 (387)
T ss_pred             ------CCC-------------------------ceEeecCCCcc-cCCHHHhccCCCCC-CCCCccchhcCCcCCceEE
Confidence                  010                         01367899999 89999999999999 6889999999999999999


Q ss_pred             hhhhhHHHHHhccCcchhhHHhhhcCeeEEEEeecccCCCCccchhcccccccCcccccchhhhcccccccccchHHHHH
Q psy4157         194 VLLMSYKRAQARNIQPLARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITA  273 (441)
Q Consensus       194 ~ll~s~~~a~~~gl~~~A~~~I~sG~advvla~G~E~ms~~P~~~~~r~g~~~g~~~~~~d~~~~g~~~~~~~~~ma~~A  273 (441)
                      +||+|+++++++++.+.++.          +..+.  .+..|..                           ........+
T Consensus       251 ~vl~see~A~~l~~~p~~~i----------~g~~~--~~~~~~~---------------------------~~~~~~~a~  291 (387)
T PRK07850        251 VLWMDEDRARALGLRPRARI----------VAQAL--VGAEPYY---------------------------HLDGPVQAT  291 (387)
T ss_pred             EEEecHHHHHHcCCCCcEEE----------EEEEE--eccCchh---------------------------hcchHHHHH
Confidence            99999999999997665431          11110  0000100                           001113466


Q ss_pred             HHHHHHhCCCHHHHHHH----HHHHHHHHHhhhhCCCCCccccceeeecCCCceeEeccCCCCCCCCHHHHhcCCCccc-
Q psy4157         274 ENIAKKWSISRLEQDEY----AYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQ-  348 (441)
Q Consensus       274 e~~a~~~Gitre~ld~~----A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~g~~~~~~D~~~r~~~t~e~l~~~~~v~~-  348 (441)
                      ++..++.|++.+|+|.|    ++........ ...|. ..+  |  +|..+|.+..   .||-..+.+..+..+-.-+. 
T Consensus       292 ~~al~~agl~~~did~~ei~d~F~~~~l~~~-e~lg~-~~~--p--vN~~GG~la~---Ghp~gatG~~~v~e~~~qL~~  362 (387)
T PRK07850        292 AKVLEKAGMKIGDIDLVEINEAFASVVLSWA-QVHEP-DMD--K--VNVNGGAIAL---GHPVGSTGARLITTALHELER  362 (387)
T ss_pred             HHHHHHcCCCHHHcCeeeecccchHHHHHHH-HHcCC-CCC--C--cCCCCchhhc---CCCcchhHHHHHHHHHHHHHh
Confidence            88888999999998877    5555555431 12232 111  3  4666776554   67776666554433222221 


Q ss_pred             ---cCCccccCCCCCCCCCcEEEEE
Q psy4157         349 ---KDGTVTAGNASGINDGAAAVLL  370 (441)
Q Consensus       349 ---p~G~lt~~n~~~~sDGAAAvVL  370 (441)
                         +-|.+++|.....  |. |+||
T Consensus       363 ~~~~~g~~~~c~~gg~--g~-a~~~  384 (387)
T PRK07850        363 TDKSTALITMCAGGAL--ST-GTII  384 (387)
T ss_pred             cCCCeEEEEEccccCc--ee-EEEE
Confidence               1166777666655  44 4444

>PRK08131 acetyl-CoA acetyltransferase; Provisional

Probab=99.93  E-value=3.4e-25  Score=228.79  Aligned_cols=239  Identities=31%  Similarity=0.432  Sum_probs=163.6

Q ss_pred             CCcccccCCCchHhhHHHHHHHhCCCHHHHhHHHHhcHHHHHHHHhCCCCCcceeeeEeccCCCceeeeccCCCCCCccH
Q psy4157          28 DGLTDAFHNIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTSV  107 (441)
Q Consensus        28 ~~l~d~~~~~~mg~~ae~~a~~~~isRe~~D~~a~~s~~ra~~a~~~g~~~~ei~p~~~~~~~g~~~~~~de~~~~~~~~  107 (441)
                      .++.|.|.+..||++||+++++||||||+||+||++||+|+.+|++.|+|++||+|+++.+.+...              
T Consensus       151 ~~~~~~~a~~~mg~~ae~~~~~ygitre~~d~vA~~S~~~~~~a~~~~~~~~~i~pi~v~~~~~~~--------------  216 (401)
T PRK08131        151 PKIVAQYGNDSMPETGDNVAAEFGISREDADRFAAQSQAKYQAAKEEGFFADEITPIEVPQGRKLP--------------  216 (401)
T ss_pred             cccccccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCceeeEEeccccCCC--------------
Confidence            445565778899999999999999999999999999999999999999999999999886421100              


Q ss_pred             HHhhhcCcccccCCceecCCCCCCCCccccchhhhhcccCceeeecccCCCCCCCHHHHhcCCCccCCCCcccCCCCCCc
Q psy4157         108 DALQKLRPVFQKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGI  187 (441)
Q Consensus       108 ~~l~~l~p~f~~~g~~t~~~~~~~~dg~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~p~~~~~g~vtagn~s~~  187 (441)
                                                              ...|++||+||+++|+|+|.+|||+| ++|++|++|+|++
T Consensus       217 ----------------------------------------~~~v~~De~~r~~~~~e~L~~l~p~f-~~g~lt~~~~s~~  255 (401)
T PRK08131        217 ----------------------------------------PKLVAEDEHPRPSSTVEALTKLKPLF-EGGVVTAGNASGI  255 (401)
T ss_pred             ----------------------------------------ceEEecCCCCCCCCCHHHHhcCCCCC-CCCCccCCcCCCC
Confidence                                                    01367788888888888888899988 5789999999999


Q ss_pred             cccchhhhhhhHHHHHhccCcchhhHHhhhcCeeEEEEeecccCCCCccchhcccccccCcccccchhhhcccccccccc
Q psy4157         188 NDGAAAVLLMSYKRAQARNIQPLARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNI  267 (441)
Q Consensus       188 ~Dgaa~~ll~s~~~a~~~gl~~~A~~~I~sG~advvla~G~E~ms~~P~~~~~r~g~~~g~~~~~~d~~~~g~~~~~~~~  267 (441)
                      +|||+++||+++++++++++.+.++.  .        ..+.-.  ..|...                           ..
T Consensus       256 ~DGAaa~vl~s~~~a~~~~~~p~~~i--~--------g~~~~~--~~~~~~---------------------------~~  296 (401)
T PRK08131        256 NDGAAALLIGSRAAGEKYGLKPMARI--L--------SSAAAG--VEPRIM---------------------------GI  296 (401)
T ss_pred             CCceEEEEEeeHHHHHHcCCCceEEE--E--------EEEEec--cCCccc---------------------------cc
Confidence            99999999999999999987765432  1        111110  011000                           00


Q ss_pred             hHHHHHHHHHHHhCCCHHHHHHH----HHHHHHHHHhhhhCCCCCccccceeeecCCCceeEeccCCCCCCCCHHHHhcC
Q psy4157         268 HMGITAENIAKKWSISRLEQDEY----AYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKL  343 (441)
Q Consensus       268 ~ma~~Ae~~a~~~Gitre~ld~~----A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~g~~~~~~D~~~r~~~t~e~l~~~  343 (441)
                      .....+++..++.|++.+|+|.|    ++..+.... ....|.- ..  ...+|..||.+.+   .||...+.+.++..+
T Consensus       297 ~~~~a~~~a~~~agl~~~did~~ei~d~Fa~~~l~~-~e~lg~~-~~--~~~vN~~GG~la~---GhP~gAtG~~~~~el  369 (401)
T PRK08131        297 GPVEAIKKALARAGLTLDDMDIIEINEAFASQVLGC-LKGLGVD-FD--DPRVNPNGGAIAV---GHPLGASGARLALTA  369 (401)
T ss_pred             hHHHHHHHHHHHcCCCHHHCCeehhccHHHHHHHHH-HHHcCCC-CC--CCCccCCccHHhc---CCchhhhHHHHHHHH
Confidence            12346688889999999998877    565555553 1223431 11  1235666775544   677766777665544


Q ss_pred             CCccc----cCCccccCCCCCCCCCcEEEE
Q psy4157         344 RPVFQ----KDGTVTAGNASGINDGAAAVL  369 (441)
Q Consensus       344 ~~v~~----p~G~lt~~n~~~~sDGAAAvV  369 (441)
                      -.-+.    +.+..++  |+...-|.+.+|
T Consensus       370 ~~qL~~~~~~~~~~~~--~~ggg~g~a~i~  397 (401)
T PRK08131        370 ARELQRRGKRYAVVSL--CIGVGQGLAMVI  397 (401)
T ss_pred             HHHHHhcCCCceEEEE--EecCChhhEEEE
Confidence            33332    1234443  444444554443

>PRK06633 acetyl-CoA acetyltransferase; Provisional

Probab=99.93  E-value=1.8e-25  Score=230.11  Aligned_cols=263  Identities=36%  Similarity=0.506  Sum_probs=169.2

Q ss_pred             CCCCCcccccccCcCCCccccccccccCCcccccCCCchHhhHHHHHHHhCCCHHHHhHHHHhcHHHHHHHHhCCCCCcc
Q psy4157           1 MSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEE   80 (441)
Q Consensus         1 mS~~P~~~~~r~g~~~g~~~~~d~~~~~~l~d~~~~~~mg~~ae~~a~~~~isRe~~D~~a~~s~~ra~~a~~~g~~~~e   80 (441)
                      ||++|+....|.+.+++.....+.+.++++.+.+++..|+.+||+++++||||||+||+||+.||+||.++.++|+|++|
T Consensus       119 ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~~~~~~gitre~~d~~Avksh~~a~~np~A~~~~~e  198 (392)
T PRK06633        119 MSLGMHGSYIRAGAKFGDIKMVDLMQYDGLTDVFSGVFMGITAENISKQFNISRQEQDEFALSSHKKAAKAQLAGIFKDE  198 (392)
T ss_pred             CCCCCcchhcccccccCcchhhhhhcccccccccCcchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHcCCCcCc
Confidence            78888522122222344322333344556666666678999999999999999999999999999999999999999999


Q ss_pred             eeeeEeccCCCceeeeccCCCCCCccHHHhhhcCcccccCCceecCCCCCCCCccccchhhhhcccCceeeecccCCCCC
Q psy4157          81 IVPVVISTRKGDVVVAKDEYPKANTSVDALQKLRPVFQKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEYPKAN  160 (441)
Q Consensus        81 i~p~~~~~~~g~~~~~~de~~~~~~~~~~l~~l~p~f~~~g~~t~~~~~~~~dg~~~~~~~~~~~~~~~~~~~d~~~~~~  160 (441)
                      |+|++++.++|..+                                                        +.+||++|++
T Consensus       199 i~p~~v~~~~~~~~--------------------------------------------------------~~~d~~~rp~  222 (392)
T PRK06633        199 ILPIEVTIKKTTSL--------------------------------------------------------FDHDETVRPD  222 (392)
T ss_pred             eeeEEeccCCCcee--------------------------------------------------------eccCCCCCCC
Confidence            99999875444333                                                        4556666666


Q ss_pred             CCHHHHhcCCCccCCCCcccCCCCCCccccchhhhhhhHHHHHhccCcchhhHHhhhcCeeEEEEeecccCCCCccchhc
Q psy4157         161 TTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQARNIQPLARIAIKSGDATAIVAGGQECMSQAPHVINI  240 (441)
Q Consensus       161 ~~~~~~~~l~p~~~~~g~vtagn~s~~~Dgaa~~ll~s~~~a~~~gl~~~A~~~I~sG~advvla~G~E~ms~~P~~~~~  240 (441)
                      +++|.|.+|+|+|.++|++|.+|+|+++|||+++||++++.++++|..+.++.  . |       .+.-  +..|..   
T Consensus       223 ~~~e~l~~l~p~~~~~g~lt~~n~s~~sDGAaalvl~see~A~~~g~~p~a~I--~-g-------~~~~--~~~~~~---  287 (392)
T PRK06633        223 TSLEILSKLRPAFDKNGVVTAGNASSINDGAACLMVVSEEALKKHNLTPLARI--V-S-------YASA--GVDPSI---  287 (392)
T ss_pred             CCHHHHccCCCccCCCCCEechhcCCccCceEEEEEecHHHHHHCCCCeeEEE--E-E-------EEEe--cCCcch---
Confidence            77777777777776678899999999999999999999999999998765432  1 1       1100  001100   


Q ss_pred             ccccccCcccccchhhhcccccccccchHHHHHHHHHHHhCCCHHHHHHH----HHHHHHHHHhhhhCCCCCccccceee
Q psy4157         241 RNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEY----AYQSQVKTAKAQEGGYFDEEIVPVVI  316 (441)
Q Consensus       241 r~g~~~g~~~~~~d~~~~g~~~~~~~~~ma~~Ae~~a~~~Gitre~ld~~----A~~S~~~A~~A~~~g~f~~ei~Pv~v  316 (441)
                                              ........+++..++.|++.+|+|.|    ++..+..... ...+. +    ...+
T Consensus       288 ------------------------~~~~~~~a~~~Al~~AGl~p~DID~~ei~dafa~~~l~~~-~~l~~-~----~~~v  337 (392)
T PRK06633        288 ------------------------MGTAPVPASQKALSKAGWSVNDLEVIEVNEAFAAQSIYVN-REMKW-D----MEKV  337 (392)
T ss_pred             ------------------------hchHHHHHHHHHHHHcCCCHHHcCeeehhhHHHHHHHHHH-hhhCC-C----cccc
Confidence                                    00112346788889999999998876    4444444321 11121 1    1234


Q ss_pred             ecCCCceeEeccCCCCCCCCHHHHhcCCCccc-cC---CccccCCCCCCCCCcEEEE
Q psy4157         317 STRKGDVVVAKDEYPKANTTVEALQKLRPVFQ-KD---GTVTAGNASGINDGAAAVL  369 (441)
Q Consensus       317 ~~~~g~~~~~~D~~~r~~~t~e~l~~~~~v~~-p~---G~lt~~n~~~~sDGAAAvV  369 (441)
                      |..+|...+   .|+...+...++..+-.-+. .+   |..++|...++  |.+.+|
T Consensus       338 N~sGg~~a~---GHplgAtG~~~~~~~~~qL~~~~~~~g~~~~c~~gG~--g~a~~~  389 (392)
T PRK06633        338 NINGGAIAI---GHPIGASGGRVLITLIHGLRRAKAKKGLVTLCIGGGM--GMAMCV  389 (392)
T ss_pred             CCCCchHhh---CCcHHHHHHHHHHHHHHHHHhcCCCeEEEEEecccCh--hheEEE
Confidence            556665444   56665555544433322222 12   55666665554  444433

>PRK08257 acetyl-CoA acetyltransferase; Validated

Probab=99.92  E-value=7e-25  Score=232.06  Aligned_cols=202  Identities=18%  Similarity=0.148  Sum_probs=147.5

Q ss_pred             chhhHHhhhcCeeEEEEeecccCCCCccchh----cccccc----c----Cccccc-chhhh-cccccccccchHHHHHH
Q psy4157         209 PLARIAIKSGDATAIVAGGQECMSQAPHVIN----IRNGIK----L----NDAEMK-DSMVF-DGLTDAFHNIHMGITAE  274 (441)
Q Consensus       209 ~~A~~~I~sG~advvla~G~E~ms~~P~~~~----~r~g~~----~----g~~~~~-~d~~~-~g~~~~~~~~~ma~~Ae  274 (441)
                      ..|+.+|++|++|+||++|.|+|+..+....    ..+...    +    +..... .++.. .++..|  ...|++.+.
T Consensus        97 ~~Aa~~IasG~advVLv~G~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~~~p--~~~yal~a~  174 (498)
T PRK08257         97 NEAALRIAAGEADVALVAGAEAQSTATKLRKAGEKLDWTPQDEGPLADRGGDPRPMASPAELRHGLDRP--VYVYPLFEN  174 (498)
T ss_pred             HHHHHHHHCCCCCEEEEeeeeeccccchhccccccccccccccccccccccccccccchhhhhcCCCCc--chHHHHHHH
Confidence            3689999999999999999999976543110    000000    0    000000 00111 132222  236899999


Q ss_pred             HHHHHhCCCHHH-HHHHH---HHHHHHHHhhhhCCCCCccccceeeecCCCceeEeccCCCCCCCCHHHHh----cCCCc
Q psy4157         275 NIAKKWSISRLE-QDEYA---YQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQ----KLRPV  346 (441)
Q Consensus       275 ~~a~~~Gitre~-ld~~A---~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~g~~~~~~D~~~r~~~t~e~l~----~~~~v  346 (441)
                      +||++||+|+|+ +++++   .++|++|.++           |.              +++|.++|+|+++    ++|+|
T Consensus       175 ay~~~~G~t~e~~~a~~a~l~~~~~~~Aa~N-----------P~--------------A~~r~~~t~eevl~~~~~~rmI  229 (498)
T PRK08257        175 ALRAALGRSPEEHRAEMGELWAPFSAVAAKN-----------PH--------------AWIPRERSAEEIVTPTPDNRMI  229 (498)
T ss_pred             HHHHHhCcCHHHHHHHHHHHHHHHHHHHhhC-----------HH--------------HhhCCCCCHHHHhcccCCCCee
Confidence            999999999998 34444   4788998742           22              4556778999999    78999


Q ss_pred             cccCCccccCCCCC-CCCCcEEEEEcCHHHHHhcCCC--ceEEEEEEEeecCCC-----CcCCCCh--HHHHHHHHHHcC
Q psy4157         347 FQKDGTVTAGNASG-INDGAAAVLLMSYKTAQARNIQ--PLARIVAMSSAGVEP-----TLMGTGP--IPAVNAVLAKAG  416 (441)
Q Consensus       347 ~~p~G~lt~~n~~~-~sDGAAAvVLaSe~~A~~lg~~--p~a~I~~~~~~~~~p-----~~~~~~~--~~Aa~~al~~AG  416 (441)
                      .+|   +|+++||+ ++|||||+||+|+++|++++++  +.++|.+++......     ..+...+  ..|+++||++||
T Consensus       230 a~P---l~~ldca~~~~DGaaAvil~S~e~A~~l~~~~~~~V~i~g~a~~~~~~~~~~r~~~~~~~~~~~aa~~a~~~AG  306 (498)
T PRK08257        230 AWP---YTKLMNANDMVDQGAAVLLTSVAKARRLGVPEDRWVYLHGGADAHDPYDILERPDLHRSPAIRAAGRRALALAG  306 (498)
T ss_pred             eCC---ccHhhcCCCCcccceEEEEeeHHHHHhcCCCCCceEEEEEEEEeeCccccccccccccChHHHHHHHHHHHHhC
Confidence            998   99999996 8999999999999999999853  358899988764321     1122233  469999999999


Q ss_pred             CCCCCccEEEecCCChhhhhhhhc
Q psy4157         417 WSKEEVGYFNRVATSGGIANRRQE  440 (441)
Q Consensus       417 l~~~DID~~Ei~D~Ft~~~~~~~~  440 (441)
                      |+++|||++||||||++.+..++|
T Consensus       307 i~~~Did~~elydcF~~~~~~~~E  330 (498)
T PRK08257        307 LGIDDIDAFDLYSCFPSAVQVAAR  330 (498)
T ss_pred             CCHHHCCEEEeccCCHHHHHHHHH
Confidence            999999999999999999999887

>PRK07108 acetyl-CoA acetyltransferase; Provisional

Probab=99.92  E-value=1.2e-24  Score=224.33  Aligned_cols=236  Identities=31%  Similarity=0.392  Sum_probs=161.9

Q ss_pred             CchHhhHHHHHHHhCCCHHHHhHHHHhcHHHHHHHHhCCCCCcceeeeEeccCCCceeeeccCCCCCCccHHHhhhcCcc
Q psy4157          37 IHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTSVDALQKLRPV  116 (441)
Q Consensus        37 ~~mg~~ae~~a~~~~isRe~~D~~a~~s~~ra~~a~~~g~~~~ei~p~~~~~~~g~~~~~~de~~~~~~~~~~l~~l~p~  116 (441)
                      ..||.++|+++++|+|+||+||+|+++||+||..|+++|+|++||+||.++...-.+    ..+                
T Consensus       146 ~~m~~~ae~~a~~~~i~r~~~d~~a~~s~~~A~~A~k~g~~~~ei~pv~~~~~~~n~----~a~----------------  205 (392)
T PRK07108        146 WSMLQTAENVAKRYGISKERQDEYGVQSQQRAAAAQAAGRFDDEIVPITVTAGVADK----ATG----------------  205 (392)
T ss_pred             cCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcCceeeEEeccccccc----ccC----------------
Confidence            479999999999999999999999999999999999999999999999886321000    000                


Q ss_pred             cccCCceecCCCCCCCCccccchhhhhcccCceeeecccCCCCCCCHHHHhcCCCccCCCCcccCCCCCCccccchhhhh
Q psy4157         117 FQKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLL  196 (441)
Q Consensus       117 f~~~g~~t~~~~~~~~dg~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~p~~~~~g~vtagn~s~~~Dgaa~~ll  196 (441)
                          +                     ..|+ ...+++||++|.++|+|+|.+|||+| ++|++|++|+|+++|||++++|
T Consensus       206 ----~---------------------~~~~-~~~~~~de~~r~~~t~e~l~~l~~~~-~~g~lt~~n~~~~~DGAaa~vl  258 (392)
T PRK07108        206 ----R---------------------LFTK-EVTVSADEGIRPDTTLEGVSKIRSAL-PGGVITAGNASQFSDGASACVV  258 (392)
T ss_pred             ----c---------------------cccc-ceeEccCCCCCCCCCHHHHhcCCCCC-CCCCCcCCcCCCCCCceEEEEE
Confidence                0                     0000 12467899999899999999999999 6799999999999999999999


Q ss_pred             hhHHHHHhccCcchhhHHhhhcCeeEEEEeecccCCCCccchhcccccccCcccccchhhhcccccccccchHHHHHHHH
Q psy4157         197 MSYKRAQARNIQPLARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENI  276 (441)
Q Consensus       197 ~s~~~a~~~gl~~~A~~~I~sG~advvla~G~E~ms~~P~~~~~r~g~~~g~~~~~~d~~~~g~~~~~~~~~ma~~Ae~~  276 (441)
                      +++++++++|..+.++.  . |   ...+      +..|..                           ........+++.
T Consensus       259 ~s~~~A~~~g~~~~~~i--~-g---~~~~------~~~~~~---------------------------~~~~~~~a~~~a  299 (392)
T PRK07108        259 MNAKVAEREGLQPLGIF--R-G---FAVA------GCEPDE---------------------------MGIGPVFAVPKL  299 (392)
T ss_pred             ecHHHHHHCCCCceEEE--E-E---EEEe------ccCCcc---------------------------cchhHHHHHHHH
Confidence            99999999998775432  1 1   0000      011100                           001123467889


Q ss_pred             HHHhCCCHHHHHHH----HHHHHHHHHhhhhCCCCCccccceeeecCCCceeEeccCCCCCCCCHHHHhcCCCcccc-C-
Q psy4157         277 AKKWSISRLEQDEY----AYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQK-D-  350 (441)
Q Consensus       277 a~~~Gitre~ld~~----A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~g~~~~~~D~~~r~~~t~e~l~~~~~v~~p-~-  350 (441)
                      .++.|++.+|+|.|    ++..+.... ....|. .    +..+|..+|.+.+   .||-..+....+.++-..++. + 
T Consensus       300 l~~agl~~~Did~~ei~eafa~~~l~~-~e~lg~-~----~~~vN~~GG~~a~---GHp~gatG~r~~~~l~~~l~~~~~  370 (392)
T PRK07108        300 LKQAGLKVDDIDLWELNEAFAVQVLYC-RDTLGI-P----MDRLNVNGGAIAV---GHPYGVSGARLTGHALIEGKRRGA  370 (392)
T ss_pred             HHHcCCCHHHcCchHhhhHHHHHHHHH-HHhcCC-C----ccccCCCCChHHh---CcchhhhHHHHHHHHHHHHHhhCC
Confidence            99999999999987    444444442 112232 2    2235667776555   677777777766665444432 2 


Q ss_pred             --CccccCCCCCCCCCcEEEE
Q psy4157         351 --GTVTAGNASGINDGAAAVL  369 (441)
Q Consensus       351 --G~lt~~n~~~~sDGAAAvV  369 (441)
                        |..++|...+.  |+|.+|
T Consensus       371 ~~g~~~~c~~gg~--g~a~~i  389 (392)
T PRK07108        371 KYVVVTMCIGGGQ--GAAGLF  389 (392)
T ss_pred             CEEEEEEccccCh--hhEEEE
Confidence              55665555444  554443

>KOG1406|consensus

Probab=99.92  E-value=3.7e-26  Score=215.88  Aligned_cols=198  Identities=19%  Similarity=0.196  Sum_probs=155.4

Q ss_pred             hhhHHhhhcCeeEEEEeecccCCCCccchh--cccccccCcccccchhhhccccc-ccccchHHHHHHHHHHHhCCCHHH
Q psy4157         210 LARIAIKSGDATAIVAGGQECMSQAPHVIN--IRNGIKLNDAEMKDSMVFDGLTD-AFHNIHMGITAENIAKKWSISRLE  286 (441)
Q Consensus       210 ~A~~~I~sG~advvla~G~E~ms~~P~~~~--~r~g~~~g~~~~~~d~~~~g~~~-~~~~~~ma~~Ae~~a~~~Gitre~  286 (441)
                      +|.+.|++|.+|+||+.|+|+|..+.....  .|. .++..+....... .++.. |.....||..+.++|++||..+|+
T Consensus        96 lakqiiesgn~dcvlalgfekm~~gsl~~k~~dra-~p~dkhi~~m~e~-ygl~a~pmaaqmfgnagkehmekygtk~eh  173 (408)
T KOG1406|consen   96 LAKQIIESGNSDCVLALGFEKMERGSLSNKAADRA-LPVDKHISVMSET-YGLEAAPMAAQMFGNAGKEHMEKYGTKPEH  173 (408)
T ss_pred             HHHHHHhcCCcceEEeechhhhCCcccchhhhhcc-CcchhhHHHHHhh-ccCCCCcchHHHhhhhHHHHHHHhCCCHHH
Confidence            688899999999999999999998866432  222 1111111110000 02222 334567899999999999999999


Q ss_pred             HHHHHHHHHHHHHhhhhCCCCCccccceeeecCCCceeEeccCCCCCCCCHHHHhcCCCccccCCccccCCCCCCCCCcE
Q psy4157         287 QDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAA  366 (441)
Q Consensus       287 ld~~A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~g~~~~~~D~~~r~~~t~e~l~~~~~v~~p~G~lt~~n~~~~sDGAA  366 (441)
                      ++.++.++|.+...+           |.              .++|...++|+++++|-+++=   +|.+.|||.+|||+
T Consensus       174 fakiawknhkhsvnn-----------py--------------sqf~deysldqvm~s~~v~df---lt~lqccptsdgaa  225 (408)
T KOG1406|consen  174 FAKIAWKNHKHSVNN-----------PY--------------SQFRDEYSLDQVMKSPQVVDF---LTKLQCCPTSDGAA  225 (408)
T ss_pred             HhHhhhhccccccCC-----------hh--------------HhhhhhccHHHHhcchHHHHH---HHHhhcCCCCCchH
Confidence            999999999998632           33              366778899999999999974   99999999999999


Q ss_pred             EEEEcCHHHHHhcCCCc-eEEEEEEEeecCCCCcCCC----------ChHHHHHHHHHHcCCCCCCccEEEecCCChhhh
Q psy4157         367 AVLLMSYKTAQARNIQP-LARIVAMSSAGVEPTLMGT----------GPIPAVNAVLAKAGWSKEEVGYFNRVATSGGIA  435 (441)
Q Consensus       367 AvVLaSe~~A~~lg~~p-~a~I~~~~~~~~~p~~~~~----------~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~~  435 (441)
                      |.||+||.++++++++. .++|++....++.|+.|..          ....+++++|++.|++|+||+++|+||||+.-.
T Consensus       226 aailaseafv~k~gl~~qaveivg~em~td~ps~faeks~ikm~gfdm~~~aa~~l~aksgltpndvqvielhdcfs~ne  305 (408)
T KOG1406|consen  226 AAILASEAFVRKHGLEKQAVEIVGMEMATDPPSTFAEKSLIKMAGFDMTRLAAKRLFAKSGLTPNDVQVIELHDCFSANE  305 (408)
T ss_pred             HHHHhHHHHHHhcccHHHHHHHHHHHhccCCchhhhhhhhhhhhcchHHHHHHHHHHHHcCCCcccceEEEeecccchhh
Confidence            99999999999999875 4588888888888876532          236799999999999999999999999999765


Q ss_pred             hh
Q psy4157         436 NR  437 (441)
Q Consensus       436 ~~  437 (441)
                      ..
T Consensus       306 li  307 (408)
T KOG1406|consen  306 LI  307 (408)
T ss_pred             hh
Confidence            43

>KOG1392|consensus

Probab=99.92  E-value=1e-24  Score=208.12  Aligned_cols=184  Identities=32%  Similarity=0.472  Sum_probs=133.7

Q ss_pred             ccccCCCchHhhHHHHHHHhCCCHHHHhHHHHhcHHHHHHHHhCCCCCcceeeeEeccCCCceeeeccCCCCCCccHHHh
Q psy4157          31 TDAFHNIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTSVDAL  110 (441)
Q Consensus        31 ~d~~~~~~mg~~ae~~a~~~~isRe~~D~~a~~s~~ra~~a~~~g~~~~ei~p~~~~~~~g~~~~~~de~~~~~~~~~~l  110 (441)
                      .+..++..||++++++|..|.+||.|||+||+|||..|.+|+++|+|. .+||+.++.++  .+..+|+++|+ +++|+|
T Consensus       205 aefstgetmghsadrlaaafnvsr~eqdeyalrshtlakeaq~~g~ft-dvvpfkv~gkd--~~t~kdngirv-ssle~l  280 (465)
T KOG1392|consen  205 AEFSTGETMGHSADRLAAAFNVSRREQDEYALRSHTLAKEAQKNGKFT-DVVPFKVDGKD--PKTIKDNGIRV-SSLEKL  280 (465)
T ss_pred             eeccccccccccHHHHHHHhccchhhhhHHHHhhhHHHHHHHhcCccc-ceeeEecCCCC--cceecCCCccc-CCHHHH
Confidence            444578899999999999999999999999999999999999999998 68999986432  23346666664 556666


Q ss_pred             hhcCcccccCCceecCCCCCCCCccccchhhhhcccCceeeecccCCCCCCCHHHHhcCCCccCC-CCcccCCCCCCccc
Q psy4157         111 QKLRPVFQKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEYPKANTTVEALQKLRPVFQK-DGTVTAGNASGIND  189 (441)
Q Consensus       111 ~~l~p~f~~~g~~t~~~~~~~~dg~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~p~~~~-~g~vtagn~s~~~D  189 (441)
                      +||||+|                                                        -+ .||||++|+|-++|
T Consensus       281 aklkpaf--------------------------------------------------------vkpygtvtaanasfltd  304 (465)
T KOG1392|consen  281 AKLKPAF--------------------------------------------------------VKPYGTVTAANASFLTD  304 (465)
T ss_pred             hhcCchh--------------------------------------------------------ccCcceeEecccchhcC
Confidence            6666665                                                        32 47899999999999


Q ss_pred             cchhhhhhhHHHHHhccCcchhhHHhhhcCeeEEEEeecccCCCCccchhcccccccCcccccchhhhcccccccccchH
Q psy4157         190 GAAAVLLMSYKRAQARNIQPLARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHM  269 (441)
Q Consensus       190 gaa~~ll~s~~~a~~~gl~~~A~~~I~sG~advvla~G~E~ms~~P~~~~~r~g~~~g~~~~~~d~~~~g~~~~~~~~~m  269 (441)
                      ||+++++|+++.+...|+.+-|+..      |...+      ++-|.                 |.+   +..|      
T Consensus       305 gasa~limteekala~gykpkaylr------dflyv------sqdpk-----------------dql---llgp------  346 (465)
T KOG1392|consen  305 GASAALIMTEEKALANGYKPKAYLR------DFLYV------SQDPK-----------------DQL---LLGP------  346 (465)
T ss_pred             cchhhhhhhHHHHHHcCCCchHHhh------hheee------ccCch-----------------hhe---eccc------
Confidence            9999999999999999999988752      22111      11111                 111   0001      


Q ss_pred             HHHHHHHHHHhCCCHHHHHHH----HHHHHHHHH-hhhhCCCCCcccc
Q psy4157         270 GITAENIAKKWSISRLEQDEY----AYQSQVKTA-KAQEGGYFDEEIV  312 (441)
Q Consensus       270 a~~Ae~~a~~~Gitre~ld~~----A~~S~~~A~-~A~~~g~f~~ei~  312 (441)
                      +.....++++.|+|..|+|.|    |+.-+-.|. +|.+..||.++-+
T Consensus       347 ay~ipkll~kagltlkdid~feiheafagqilanlkamdsdwfck~ym  394 (465)
T KOG1392|consen  347 AYVIPKLLDKAGLTLKDIDVFEIHEAFAGQILANLKAMDSDWFCKEYM  394 (465)
T ss_pred             ccccHHHHHHcCCcccccchhhhHHHHhHHHHhhhhhhcchHHHHHHh
Confidence            112267788899999999988    666666664 5667778866543

>PRK09268 acetyl-CoA acetyltransferase; Provisional

Probab=99.91  E-value=2.1e-24  Score=224.69  Aligned_cols=119  Identities=39%  Similarity=0.581  Sum_probs=99.8

Q ss_pred             CcccccCCCchHhhHHHHHHHhCCCHHHHhHHHHhcHHHHHHHHhCCCCCcceeeeEeccCCCceeeeccCCCCCCccHH
Q psy4157          29 GLTDAFHNIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTSVD  108 (441)
Q Consensus        29 ~l~d~~~~~~mg~~ae~~a~~~~isRe~~D~~a~~s~~ra~~a~~~g~~~~ei~p~~~~~~~g~~~~~~de~~~~~~~~~  108 (441)
                      .++|++.+.+||.++|+++++||||||+||+||++||++|++|+++|+|++||+|+.     +   |+            
T Consensus       168 ~~~~~~~~~~m~~~ae~~a~~ygisre~~d~~Avksh~~A~~A~~~g~~~~einP~~-----~---~~------------  227 (427)
T PRK09268        168 RNGEPRTGLSMGEHAAITAKEWGISREAQDELAAASHQNLAAAYDRGFFDDLITPFL-----G---LT------------  227 (427)
T ss_pred             cccccccCCcHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccCcc-----C---cc------------
Confidence            445556677899999999999999999999999999999999999999999999982     1   33            


Q ss_pred             HhhhcCcccccCCceecCCCCCCCCccccchhhhhcccCceeeecccCCCCCCCHHHHhcCCCccCC--CCcccCCCCCC
Q psy4157         109 ALQKLRPVFQKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEYPKANTTVEALQKLRPVFQK--DGTVTAGNASG  186 (441)
Q Consensus       109 ~l~~l~p~f~~~g~~t~~~~~~~~dg~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~p~~~~--~g~vtagn~s~  186 (441)
                                                                  +|+++|.++|+|+|.++||+|.+  +|++|++|+|+
T Consensus       228 --------------------------------------------~D~~~r~~~t~e~l~~~~~v~~p~~~g~lt~~n~~~  263 (427)
T PRK09268        228 --------------------------------------------RDNNLRPDSSLEKLAKLKPVFGKGGRATMTAGNSTP  263 (427)
T ss_pred             --------------------------------------------cCCCCCCCCCHHHHhCCCcccccCCCCceeccccCC
Confidence                                                        45555555666666666666665  68899999999


Q ss_pred             ccccchhhhhhhHHHHHhccCcchh
Q psy4157         187 INDGAAAVLLMSYKRAQARNIQPLA  211 (441)
Q Consensus       187 ~~Dgaa~~ll~s~~~a~~~gl~~~A  211 (441)
                      ++|||+++||+|++++++++..+.+
T Consensus       264 ~~DGAaAvvl~s~~~A~~l~~~p~~  288 (427)
T PRK09268        264 LTDGASVVLLASEEWAAEHGLPVLA  288 (427)
T ss_pred             CCCceEEEEEecHHHHHHcCCCceE
Confidence            9999999999999999999887643

>PRK09052 acetyl-CoA acetyltransferase; Provisional

Probab=99.91  E-value=4.3e-24  Score=220.62  Aligned_cols=210  Identities=33%  Similarity=0.454  Sum_probs=145.4

Q ss_pred             CchHhhHHHHHHHhCCCHHHHhHHHHhcHHHHHHHHhCCCCCcceeeeEeccCCCceeeeccCCCCCCccHHHhhhcCcc
Q psy4157          37 IHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTSVDALQKLRPV  116 (441)
Q Consensus        37 ~~mg~~ae~~a~~~~isRe~~D~~a~~s~~ra~~a~~~g~~~~ei~p~~~~~~~g~~~~~~de~~~~~~~~~~l~~l~p~  116 (441)
                      ..|+.+||+++++||||||+||+||++||+||.+++++|+|++||+|++|...+.                        +
T Consensus       152 ~~~~~~a~~~~~~ygitre~~d~~a~~sh~~a~~n~~ag~~~~ei~~~~v~~~~~------------------------~  207 (399)
T PRK09052        152 YGMGLTAEKVAEQWKVSREDQDAFALESHQKAIAAQQAGEFKDEITPYEITERFP------------------------D  207 (399)
T ss_pred             chHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCCceEeeEecccccc------------------------c
Confidence            4799999999999999999999999999999999999999999999998864310                        0


Q ss_pred             cccCCceecCCCCCCCCccccchhhhhcccCceeeecccCCCCCCCHHHHhcCCCccCCCCcccCCCCCCccccchhhhh
Q psy4157         117 FQKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLL  196 (441)
Q Consensus       117 f~~~g~~t~~~~~~~~dg~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~p~~~~~g~vtagn~s~~~Dgaa~~ll  196 (441)
                      +.+ |..                   +  +-+..+.+|+++|+++++|+|++|||+|.++|++|++|+|+++|||+++||
T Consensus       208 ~~~-~~~-------------------~--~~~~~~~~D~~~r~~~~~e~l~~l~p~f~~~g~lt~~n~s~~~DGAaa~vl  265 (399)
T PRK09052        208 LAT-GEV-------------------D--VKTRTVDLDEGPRADTSLEGLAKLKPVFANKGSVTAGNSSQTSDGAGAVIL  265 (399)
T ss_pred             ccc-Ccc-------------------c--ccceEeccCCCCCCCCCHHHHhcCCCccCCCCcEECCccCCCCCceEEEEE
Confidence            000 000                   0  001246788888888899999999999987899999999999999999999


Q ss_pred             hhHHHHHhccCcchhhHHhhhcCeeEEEEeecccCCCCccchhcccccccCcccccchhhhcccccccccchHHHHHHHH
Q psy4157         197 MSYKRAQARNIQPLARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENI  276 (441)
Q Consensus       197 ~s~~~a~~~gl~~~A~~~I~sG~advvla~G~E~ms~~P~~~~~r~g~~~g~~~~~~d~~~~g~~~~~~~~~ma~~Ae~~  276 (441)
                      ++++.++++|+.+.++.          +..+.-  +..|..                           ........+++.
T Consensus       266 ~se~~a~~~g~~~~a~i----------~g~~~~--~~~~~~---------------------------~~~~~~~A~~~a  306 (399)
T PRK09052        266 VSEKALKQFNLTPLARF----------VSFAVA--GVPPEI---------------------------MGIGPIEAIPAA  306 (399)
T ss_pred             ecHHHHHHCCCCeeEEE----------EEEEEe--ccCCCc---------------------------cchhHHHHHHHH
Confidence            99999999998775442          111110  111100                           001224567888


Q ss_pred             HHHhCCCHHHHHHH----HHHHHHHHHhhhhCCCCCccccceeeecCCCceeEeccCCCCCCCCHHHH
Q psy4157         277 AKKWSISRLEQDEY----AYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEAL  340 (441)
Q Consensus       277 a~~~Gitre~ld~~----A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~g~~~~~~D~~~r~~~t~e~l  340 (441)
                      +++.|++.+|+|.|    ++.....+.. ...|. ..    ..+|..||.+.+   .|+-..+.+.++
T Consensus       307 l~~Agi~~~did~~ei~D~f~~~~l~~~-e~lg~-~~----~~vN~~GG~la~---GHp~gasG~~~~  365 (399)
T PRK09052        307 LKQAGLKQDDLDWIELNEAFAAQSLAVI-RDLGL-DP----SKVNPLGGAIAL---GHPLGATGAIRT  365 (399)
T ss_pred             HHHcCCCHHHcCEEEeCcHHHHHHHHHH-HHhCC-CC----cccCCCCchhhc---CchHHHHHHHHH
Confidence            99999999999877    5555555531 12232 11    234555664433   565544444333

>PRK06366 acetyl-CoA acetyltransferase; Provisional

Probab=99.91  E-value=2.7e-24  Score=221.58  Aligned_cols=254  Identities=32%  Similarity=0.445  Sum_probs=177.8

Q ss_pred             CCCCCcccc--cccCcCC---CccccccccccCCcccccCCCchHhhHHHHHHHhCCCHHHHhHHHHhcHHHHHHHHhCC
Q psy4157           1 MSQAPHVIN--IRNGIKL---NDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGG   75 (441)
Q Consensus         1 mS~~P~~~~--~r~g~~~---g~~~~~d~~~~~~l~d~~~~~~mg~~ae~~a~~~~isRe~~D~~a~~s~~ra~~a~~~g   75 (441)
                      ||++|+...  .|++.++   ++....+.+...++.+++...+|+.+||+.+++||||||+||+||+.||++|+++.++|
T Consensus       118 ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~mal~A~~~~~~yGitrE~~a~vAv~s~~~A~~np~ag  197 (388)
T PRK06366        118 MSNAPFLLPSDLRWGPKHLLHKNYKIDDAMLVDGLIDAFYFEHMGVSAERTARKYGITREMADEYSVQSYERAIRATESG  197 (388)
T ss_pred             cccCcccccccccccccccccccchhhhhhcccCccccccCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhhHhcC
Confidence            789997542  2322211   12112233344677887777789999999999999999999999999999999999999


Q ss_pred             CCCcceeeeEeccCCCceeeeccCCCCCCccHHHhhhcCcccccCCceecCCCCCCCCccccchhhhhcccCceeeeccc
Q psy4157          76 YFDEEIVPVVISTRKGDVVVAKDEYPKANTSVDALQKLRPVFQKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDE  155 (441)
Q Consensus        76 ~~~~ei~p~~~~~~~g~~~~~~de~~~~~~~~~~l~~l~p~f~~~g~~t~~~~~~~~dg~~~~~~~~~~~~~~~~~~~d~  155 (441)
                      +|++||+|+..                                                                +++||
T Consensus       198 ~~~~ei~p~~~----------------------------------------------------------------~~~d~  213 (388)
T PRK06366        198 EFRNEIVPFND----------------------------------------------------------------LDRDE  213 (388)
T ss_pred             Ccccccccccc----------------------------------------------------------------ccccc
Confidence            99999999830                                                                34677


Q ss_pred             CCCCCCCHHHHhcCCCccCCCCcccCCCCCCccccchhhhhhhHHHHHhccCcchhhHHhhhcCeeEEEEeecccCCCCc
Q psy4157         156 YPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQARNIQPLARIAIKSGDATAIVAGGQECMSQAP  235 (441)
Q Consensus       156 ~~~~~~~~~~~~~l~p~~~~~g~vtagn~s~~~Dgaa~~ll~s~~~a~~~gl~~~A~~~I~sG~advvla~G~E~ms~~P  235 (441)
                      ++| ++|+|++.++||+|.++|++|.+|+|+++|||+++||+|++++++++..+.++.  . |   ...+      +..|
T Consensus       214 ~~r-~~t~e~~~~s~~v~~p~g~lt~~d~s~~sDGAaAvvl~See~A~~l~~~pv~~I--~-g---~~~~------~~~~  280 (388)
T PRK06366        214 GIR-KTTMEDLAKLPPAFDKNGILTAGNSAQLSDGGSALVMASEKAINEYGLKPIARI--T-G---YESA------SLDP  280 (388)
T ss_pred             Ccc-cCCHHHHhhCCCccCCCCCEehhhcCCcccceeEEEEecHHHHHHcCCCcCEEE--E-E---EEEE------ecCH
Confidence            887 688888888888888888999999999999999999999999999998775432  1 1   1000      0011


Q ss_pred             cchhcccccccCcccccchhhhcccccccccchHHHHHHHHHHHhCCCHHHHHHH----HHHHHHHHHhhhhCCCCCccc
Q psy4157         236 HVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEY----AYQSQVKTAKAQEGGYFDEEI  311 (441)
Q Consensus       236 ~~~~~r~g~~~g~~~~~~d~~~~g~~~~~~~~~ma~~Ae~~a~~~Gitre~ld~~----A~~S~~~A~~A~~~g~f~~ei  311 (441)
                      .                 +.     .   .  .....+++..++.|++.+|+|-|    ++..+..... ...| |+.+ 
T Consensus       281 ~-----------------~~-----~---~--~~~~A~~~al~~Agl~~~DiDv~Ei~daFa~~~l~~l-e~lg-l~g~-  330 (388)
T PRK06366        281 L-----------------DF-----V---E--APIPATRKLLEKQNKSIDYYDLVEHNEAFSIASIIVR-DQLK-IDNE-  330 (388)
T ss_pred             H-----------------Hh-----c---c--cHHHHHHHHHHHcCCCHHHcceeeccchhHHHHHHHH-HHhC-CCCC-
Confidence            0                 00     0   0  01357789999999999999877    6666666541 1223 2322 


Q ss_pred             cceeeecCCCceeEeccCCCCCCCCHHHHhcCCCcccc-C---CccccCCCCCCCCCcEEEE
Q psy4157         312 VPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQK-D---GTVTAGNASGINDGAAAVL  369 (441)
Q Consensus       312 ~Pv~v~~~~g~~~~~~D~~~r~~~t~e~l~~~~~v~~p-~---G~lt~~n~~~~sDGAAAvV  369 (441)
                         .+|..||.+.+   .||...+.+.++..+-.-+.. +   |..++|.....  |.+++|
T Consensus       331 ---~vN~~GG~la~---GHP~GatG~~~~~~l~~qL~~~~~~~g~~~~c~~gg~--g~a~~~  384 (388)
T PRK06366        331 ---RFNVNGGAVAI---GHPIGNSGSRIIVTLINALKTRHMKTGLATLCHGGGG--AHTLTL  384 (388)
T ss_pred             ---ccCCCCchhhh---CCCcCCCHHHHHHHHHHHHHhcCCCeEEEEEecccCh--hhEEEE
Confidence               35777887666   788888888877666554432 2   45566555544  554444

>TIGR02446 FadI fatty oxidation complex, beta subunit FadI

Probab=99.90  E-value=1.3e-23  Score=218.88  Aligned_cols=118  Identities=37%  Similarity=0.558  Sum_probs=102.2

Q ss_pred             CCchHhhHHHHHHHhCCCHHHHhHHHHhcHHHHHHHHhCCCCCcceeeeEeccCCCceeeeccCCCCCCccHHHhhhcCc
Q psy4157          36 NIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTSVDALQKLRP  115 (441)
Q Consensus        36 ~~~mg~~ae~~a~~~~isRe~~D~~a~~s~~ra~~a~~~g~~~~ei~p~~~~~~~g~~~~~~de~~~~~~~~~~l~~l~p  115 (441)
                      +.+||.+||+++++||||||+||+||++||++|.+||++|+|++||+||.+..++  .                      
T Consensus       175 ~~~m~~~ae~~a~~ygisre~~d~~Avksh~~a~~A~~~g~~~~ei~p~~~np~a--~----------------------  230 (430)
T TIGR02446       175 GLSMGQTAEQMAKTYGITRAEQDALAHRSHTLASQAWRDGKLAGEVMTAFPPPYK--Q----------------------  230 (430)
T ss_pred             CCcHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHcCCCCceeeeeeecCCc--e----------------------
Confidence            6689999999999999999999999999999999999999999999999764321  1                      


Q ss_pred             ccccCCceecCCCCCCCCccccchhhhhcccCceeeecccCCCCCCCHHHHhcCCCccCC-CCcccCCCCCCccccchhh
Q psy4157         116 VFQKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEYPKANTTVEALQKLRPVFQK-DGTVTAGNASGINDGAAAV  194 (441)
Q Consensus       116 ~f~~~g~~t~~~~~~~~dg~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~p~~~~-~g~vtagn~s~~~Dgaa~~  194 (441)
                                                        .+.+||++|.++|+|++.++||+|.+ .|++|.+|+|+++|||+++
T Consensus       231 ----------------------------------~~~~D~~~r~~~t~e~~~~~~~i~~p~~g~lt~~~~~~~~DGAaA~  276 (430)
T TIGR02446       231 ----------------------------------WIAEDNNIRHNSTLAGYAKLRPAFDRKHGSVTAANSTPLTDGAAAV  276 (430)
T ss_pred             ----------------------------------EecccCCCCCCCCHHHHhcCCceecCCCCceechhcCCCCCceEEE
Confidence                                              25567777777777788888888765 4889999999999999999


Q ss_pred             hhhhHHHHHhccCcchh
Q psy4157         195 LLMSYKRAQARNIQPLA  211 (441)
Q Consensus       195 ll~s~~~a~~~gl~~~A  211 (441)
                      ||+|+++++++++.+.+
T Consensus       277 il~se~~A~~l~~~p~~  293 (430)
T TIGR02446       277 ILMREGRAKELGMEPLG  293 (430)
T ss_pred             EEecHHHHHHcCCCceE
Confidence            99999999999887643

This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.

>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed

Probab=99.90  E-value=2.2e-23  Score=217.32  Aligned_cols=127  Identities=39%  Similarity=0.552  Sum_probs=106.8

Q ss_pred             CCcccccCCCchHhhHHHHHHHhCCCHHHHhHHHHhcHHHHHHHHhCCCCCcceeeeEeccCCCceeeeccCCCCCCccH
Q psy4157          28 DGLTDAFHNIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTSV  107 (441)
Q Consensus        28 ~~l~d~~~~~~mg~~ae~~a~~~~isRe~~D~~a~~s~~ra~~a~~~g~~~~ei~p~~~~~~~g~~~~~~de~~~~~~~~  107 (441)
                      +++.+..++.+||.+||+++++||||||+||+||++||++|.+++++|+|++|||||.+++++  .              
T Consensus       165 ~~~~~~~~~~~m~~~A~~~~~~ygisre~~~~~avksh~~a~~~~~~g~~~~ei~p~~~~p~a--~--------------  228 (428)
T PRK08963        165 PAVAEYSTGLRMGDTAEQMAKTYGISREEQDALAHRSHQLAAQAWAEGKLDDEVMTAHVPPYK--Q--------------  228 (428)
T ss_pred             cccccccCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccceeeEEecCCc--e--------------
Confidence            444553346789999999999999999999999999999999999999999999999885321  1              


Q ss_pred             HHhhhcCcccccCCceecCCCCCCCCccccchhhhhcccCceeeecccCCCCCCCHHHHhcCCCccCC-CCcccCCCCCC
Q psy4157         108 DALQKLRPVFQKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEYPKANTTVEALQKLRPVFQK-DGTVTAGNASG  186 (441)
Q Consensus       108 ~~l~~l~p~f~~~g~~t~~~~~~~~dg~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~p~~~~-~g~vtagn~s~  186 (441)
                                                                .+.+||++|.++|+|++.++||+|.+ +|++|.+|+|+
T Consensus       229 ------------------------------------------~~~~D~~~r~~~t~e~~~~~~~v~~p~~g~lt~~~~~~  266 (428)
T PRK08963        229 ------------------------------------------PLEEDNNIRGDSTLEDYAKLRPAFDRKHGTVTAANSTP  266 (428)
T ss_pred             ------------------------------------------eeCCCCCCCCCCCHHHHhcCCccccCCCCceehhhcCC
Confidence                                                      24566777767777888888888763 58999999999


Q ss_pred             ccccchhhhhhhHHHHHhccCcchhh
Q psy4157         187 INDGAAAVLLMSYKRAQARNIQPLAR  212 (441)
Q Consensus       187 ~~Dgaa~~ll~s~~~a~~~gl~~~A~  212 (441)
                      ++|||+++||++++++++++..+.++
T Consensus       267 ~~DGAaA~vl~see~A~~l~~~p~~~  292 (428)
T PRK08963        267 LTDGAAAVLLMSESRAKALGLTPLGY  292 (428)
T ss_pred             CCCceEEEEEecHHHHHHcCCCccEE
Confidence            99999999999999999999877543

>TIGR02445 fadA fatty oxidation complex, beta subunit FadA

Probab=99.90  E-value=2.1e-23  Score=214.65  Aligned_cols=211  Identities=30%  Similarity=0.417  Sum_probs=152.6

Q ss_pred             CchHhhHHHHHHHhCCCHHHHhHHHHhcHHHHHHHHhCCCCCcceeeeEeccCCCceeeeccCCCCCCccHHHhhhcCcc
Q psy4157          37 IHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTSVDALQKLRPV  116 (441)
Q Consensus        37 ~~mg~~ae~~a~~~~isRe~~D~~a~~s~~ra~~a~~~g~~~~ei~p~~~~~~~g~~~~~~de~~~~~~~~~~l~~l~p~  116 (441)
                      ..|+.+||+++++||||||+||+||++||+||.+|+++|+|++||+||++++++|..                       
T Consensus       143 ~~~~~~a~~~~~~ygitre~~d~~A~~sh~~a~~a~~~g~f~nei~pv~~~~~~~~~-----------------------  199 (385)
T TIGR02445       143 GMMGLTAEMLGKMHGISREQQDAFAARSHARAHAATQEGKFKNEIIPTQGHDADGFL-----------------------  199 (385)
T ss_pred             chHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccceeeeeeccCCCCc-----------------------
Confidence            489999999999999999999999999999999999999999999999998644321                       


Q ss_pred             cccCCceecCCCCCCCCccccchhhhhcccCceeeecccCCCCCCCHHHHhcCCCccCC-CCcccCCCCCCccccchhhh
Q psy4157         117 FQKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEYPKANTTVEALQKLRPVFQK-DGTVTAGNASGINDGAAAVL  195 (441)
Q Consensus       117 f~~~g~~t~~~~~~~~dg~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~p~~~~-~g~vtagn~s~~~Dgaa~~l  195 (441)
                                                      +.+.+|+++|.++++|++.++||+|.+ +|++|++|+|+++|||++++
T Consensus       200 --------------------------------~~~~~da~~r~~~t~e~~~~~~~v~~p~~g~lt~~~~~~~sDGAaavv  247 (385)
T TIGR02445       200 --------------------------------KQFDYDEVIRPETTVESLAALRPAFDPKNGTVTAGTSSALSDGASAML  247 (385)
T ss_pred             --------------------------------eeeCCCCCCCCCCCHHHHhcCCceecCCCCceecccCCCcCCceEEEE
Confidence                                            235677777777888888888888876 78999999999999999999


Q ss_pred             hhhHHHHHhccCcchhhHHhhhcCeeEEEEeecccCCCCccchhcccccccCcccccchhhhcccccccccchHHHHHHH
Q psy4157         196 LMSYKRAQARNIQPLARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAEN  275 (441)
Q Consensus       196 l~s~~~a~~~gl~~~A~~~I~sG~advvla~G~E~ms~~P~~~~~r~g~~~g~~~~~~d~~~~g~~~~~~~~~ma~~Ae~  275 (441)
                      |++++++++++..+.++.          +..+.-  +..|..        +            +       ......+++
T Consensus       248 L~s~e~A~~~g~~~~a~I----------~g~~~~--~~~~~~--------~------------~-------~~~~~a~~~  288 (385)
T TIGR02445       248 VMSEQRANELGLKPRARI----------RSMAVA--GCDPSI--------M------------G-------YGPVPATQK  288 (385)
T ss_pred             EecHHHHHHCCCCeeEEE----------EEEEEc--CCCCcc--------c------------c-------hhHHHHHHH
Confidence            999999999987665431          111111  001100        0            0       011235578


Q ss_pred             HHHHhCCCHHHHHHH----HHHHHHHHHhhhhCCCCCccccceeeecCCCceeEeccCCCCCCCCHHHHhcCCCcc
Q psy4157         276 IAKKWSISRLEQDEY----AYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVF  347 (441)
Q Consensus       276 ~a~~~Gitre~ld~~----A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~g~~~~~~D~~~r~~~t~e~l~~~~~v~  347 (441)
                      ..++.|++.+|+|.|    ++.....+. ..+.|...+-  ...+|..+|.+.+   .||-..+.+..+..+-...
T Consensus       289 al~~AGi~p~DId~~Ei~daFa~~~l~~-~e~lg~~~~g--~~~vN~~GG~la~---GhP~GATG~r~v~~l~~~l  358 (385)
T TIGR02445       289 ALKRAGLSISDIDVFELNEAFAAQALPC-LKDLGLLDKM--DEKVNLNGGAIAL---GHPLGCSGARISTTLLNLM  358 (385)
T ss_pred             HHHHcCCCHHHcCEEEEccccHHHHHHH-HHHcCCCCCC--CCCcCCCCchhhc---CCCccccHHHHHHHHHHHH
Confidence            888999999999876    666666653 1234543320  0235666776555   6887777777665554444

This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.

>COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism]

Probab=99.90  E-value=1.5e-23  Score=216.03  Aligned_cols=229  Identities=33%  Similarity=0.432  Sum_probs=166.2

Q ss_pred             CCCCCcccccccCcCCCccccccccccCCcccccCCCchHhhHHHHHHHhCCCHHHHhHHHHhcHHHHHHHHhCCCCCcc
Q psy4157           1 MSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEE   80 (441)
Q Consensus         1 mS~~P~~~~~r~g~~~g~~~~~d~~~~~~l~d~~~~~~mg~~ae~~a~~~~isRe~~D~~a~~s~~ra~~a~~~g~~~~e   80 (441)
                      ||++|+.   |++.++++. ..|.+..+++++++....||.+||+++++||||||+||+||++||+||+++.+.|+| +|
T Consensus       122 mS~~~~~---~~~~~~~~~-~~d~~~~~~~~~~~~~~~~g~~A~~~~~~yGitre~~d~~Av~sh~~A~~np~a~~~-~e  196 (392)
T COG0183         122 MSDAPMG---REGVRVLDS-AVDPMFEDPLGDATPGYLMGLTAERYAKRYGISREDQDEVAVKSHKNAAANPKAGFF-DE  196 (392)
T ss_pred             ccCCCcc---ccchhhhhh-hhhhccccccccccchhHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhhHhcCCC-Cc
Confidence            8999986   677777766 788889999999998899999999999999999999999999999999999999999 99


Q ss_pred             eeeeEeccCCCceeeeccCCCCCCccHHHhhhcCcccccCCceecCCCCCCCCccccchhhhhcccCceeeecccCCCCC
Q psy4157          81 IVPVVISTRKGDVVVAKDEYPKANTSVDALQKLRPVFQKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEYPKAN  160 (441)
Q Consensus        81 i~p~~~~~~~g~~~~~~de~~~~~~~~~~l~~l~p~f~~~g~~t~~~~~~~~dg~~~~~~~~~~~~~~~~~~~d~~~~~~  160 (441)
                      |+|+++.+.    .+..|+++|++.                                                      -
T Consensus       197 I~~~~v~~~----~~~~dp~~r~d~------------------------------------------------------~  218 (392)
T COG0183         197 ITPEDVLNS----PVVADPLRRLDC------------------------------------------------------S  218 (392)
T ss_pred             eeeEEecCC----ceecCCcccCCC------------------------------------------------------C
Confidence            999998642    344455554440                                                      0


Q ss_pred             CCHHHHhcCCCccCCC-CcccCCCCCCccccchhhhhhhHHHHHhccCcchhhHHhhhcCeeEEEEeecccCCCCccchh
Q psy4157         161 TTVEALQKLRPVFQKD-GTVTAGNASGINDGAAAVLLMSYKRAQARNIQPLARIAIKSGDATAIVAGGQECMSQAPHVIN  239 (441)
Q Consensus       161 ~~~~~~~~l~p~~~~~-g~vtagn~s~~~Dgaa~~ll~s~~~a~~~gl~~~A~~~I~sG~advvla~G~E~ms~~P~~~~  239 (441)
                      ++.|.+++|+|+|.+. |++|+||+|+++||+++++++++..+..+++.++|+..=. ..+    .+.+..| ..|..  
T Consensus       219 ~~~dg~a~l~~a~~~~~g~~tagnas~i~dga~a~~~~~~~~~~~~~l~~~A~~~a~-~~a----Gv~p~~~-~~~v~--  290 (392)
T COG0183         219 PTSDGAAALVPAFEEVGGTVTAGNASGINDGAAALLLMSESKAKELGLAPLAAIRAY-AMA----GVDPSIM-DGPVA--  290 (392)
T ss_pred             CChhhhcCceeccccCCceEEEecccccccHHHHHHHhhHHHHHHCCCcHHHHHHHH-HHh----CCCcccc-cCCHH--
Confidence            4455555555555543 5799999999999999999999999999999998874110 000    0111222 22221  


Q ss_pred             cccccccCcccccchhhhcccccccccchHHHHHHHHHHHhCCC-HHHHHHH----HHHHHHHHHhhhhCCCCCccccce
Q psy4157         240 IRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSIS-RLEQDEY----AYQSQVKTAKAQEGGYFDEEIVPV  314 (441)
Q Consensus       240 ~r~g~~~g~~~~~~d~~~~g~~~~~~~~~ma~~Ae~~a~~~Git-re~ld~~----A~~S~~~A~~A~~~g~f~~ei~Pv  314 (441)
                                                      .......+.++. .|+++.|    |++.+..+.. ...|.       .
T Consensus       291 --------------------------------av~~~~~~~~l~~~edlgl~e~nEafa~~~~~~~-~~~G~-------~  330 (392)
T COG0183         291 --------------------------------AVHDALTIAGLLALEDLGLAEKGEAFAAVALGVT-KILGD-------L  330 (392)
T ss_pred             --------------------------------HHHHHHHHcCCchhhhcCceecChHHHHHHHhhH-HhcCC-------c
Confidence                                            225556667777 7777777    7777777652 22333       2


Q ss_pred             eeecCCCceeEeccCCCCCCCCHHHHhcC
Q psy4157         315 VISTRKGDVVVAKDEYPKANTTVEALQKL  343 (441)
Q Consensus       315 ~v~~~~g~~~~~~D~~~r~~~t~e~l~~~  343 (441)
                      .+|.+||.+.+   .||-..+....+..+
T Consensus       331 ~VN~~GGaiA~---GHPiGAtG~~~~~~l  356 (392)
T COG0183         331 PVNPSGGAIAL---GHPIGATGARILVEL  356 (392)
T ss_pred             eeCCCcchhhc---CCCccchHHHHHHHH
Confidence            35777887666   678777777655444

>PRK08170 acetyl-CoA acetyltransferase; Provisional

Probab=99.89  E-value=8.3e-23  Score=212.93  Aligned_cols=124  Identities=39%  Similarity=0.606  Sum_probs=105.1

Q ss_pred             CCcccccCCCchHhhHHHHHHHhCCCHHHHhHHHHhcHHHHHHHHhCCCCCcceeeeEeccCCCceeeeccCCCCCCccH
Q psy4157          28 DGLTDAFHNIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTSV  107 (441)
Q Consensus        28 ~~l~d~~~~~~mg~~ae~~a~~~~isRe~~D~~a~~s~~ra~~a~~~g~~~~ei~p~~~~~~~g~~~~~~de~~~~~~~~  107 (441)
                      +++.+++++..|+.+||+.+++||||||+||+||+.||++|.+|++.|+|+ ||+||+  +++|+ .             
T Consensus       166 ~g~~~~~~~~~~a~~a~~~~~~ygitre~~a~vav~s~~~a~~A~~~g~~~-~i~pv~--~~~~n-p-------------  228 (426)
T PRK08170        166 RGLTDPVVGLNMGQTAEVLAHRFGITREQMDAYAARSHQRLAAAQAEGRLK-EVVPLF--DRDGK-F-------------  228 (426)
T ss_pred             ccccccccCcCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcc-eEeeee--cCCCC-e-------------
Confidence            466776666789999999999999999999999999999999999999998 999997  23221 2             


Q ss_pred             HHhhhcCcccccCCceecCCCCCCCCccccchhhhhcccCceeeecccCCCCCCCHHHHhcCCCccC-CCCcccCCCCCC
Q psy4157         108 DALQKLRPVFQKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEYPKANTTVEALQKLRPVFQ-KDGTVTAGNASG  186 (441)
Q Consensus       108 ~~l~~l~p~f~~~g~~t~~~~~~~~dg~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~p~~~-~~g~vtagn~s~  186 (441)
                                                                 ++.||++|+++|+|++.++||+|. +.|++|++|+|+
T Consensus       229 -------------------------------------------~a~de~~r~~~t~e~~~~~~~v~~~p~~~lt~~~~s~  265 (426)
T PRK08170        229 -------------------------------------------YDHDDGVRPDSSMEKLAKLKPFFDRPYGRVTAGNSSQ  265 (426)
T ss_pred             -------------------------------------------eccCCCCCCCCCHHHHhcCCCcccCCCCCEeccccCC
Confidence                                                       355666666677777777777776 568899999999


Q ss_pred             ccccchhhhhhhHHHHHhccCcchh
Q psy4157         187 INDGAAAVLLMSYKRAQARNIQPLA  211 (441)
Q Consensus       187 ~~Dgaa~~ll~s~~~a~~~gl~~~A  211 (441)
                      ++|||+++||++++++++++..+.+
T Consensus       266 ~~DGAaA~vl~s~e~A~~~~~~p~~  290 (426)
T PRK08170        266 ITDGACWLLLASEEAVKKYGLPPLG  290 (426)
T ss_pred             CCCceEEEEEecHHHHHHCCCCceE
Confidence            9999999999999999999987754

>PRK06445 acetyl-CoA acetyltransferase; Provisional

Probab=99.89  E-value=9.7e-23  Score=210.46  Aligned_cols=233  Identities=32%  Similarity=0.445  Sum_probs=160.9

Q ss_pred             cccCCCchHhhHHHHHHHhCCCHHHHhHHHHhcHHHHHHHHhCCCCCcceeeeEeccCCCceeeeccCCCCCCccHHHhh
Q psy4157          32 DAFHNIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTSVDALQ  111 (441)
Q Consensus        32 d~~~~~~mg~~ae~~a~~~~isRe~~D~~a~~s~~ra~~a~~~g~~~~ei~p~~~~~~~g~~~~~~de~~~~~~~~~~l~  111 (441)
                      +.+.+..||.+||+++++||||||+||+||++||++|.+|+++|+|++||+||++. ++|..                  
T Consensus       152 ~~~~~~~~a~~a~~~~~~ygitre~~a~va~~sh~~A~~a~~~g~~~~ei~p~~~~-~~~~~------------------  212 (394)
T PRK06445        152 DLTTGYVMGLTAEKLAEEAGIKREEMDRWSLRSHQLAAKAIQEGYFKDEILPIEVE-VEGKK------------------  212 (394)
T ss_pred             cccCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEeEEEec-CCCCc------------------
Confidence            33445679999999999999999999999999999999999999999999999883 34321                  


Q ss_pred             hcCcccccCCceecCCCCCCCCccccchhhhhcccCceeeecccCCCCCCCHHHHhcCCCccCCCCcccCCCCCCccccc
Q psy4157         112 KLRPVFQKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGA  191 (441)
Q Consensus       112 ~l~p~f~~~g~~t~~~~~~~~dg~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~p~~~~~g~vtagn~s~~~Dga  191 (441)
                                                           ..+.+|+++|.++|+|++.+++|+|.++|.+|.+|+|+++|||
T Consensus       213 -------------------------------------~~~npda~~r~~~t~e~~~~~~~v~~~~g~lt~~~~~~~~DGA  255 (394)
T PRK06445        213 -------------------------------------KVVDVDQSVRPDTSLEKLAKLPPAFKPDGVITAGNSSPLNSGA  255 (394)
T ss_pred             -------------------------------------eeeCCCCCCCCCCCHHHHhcCCCccCCCCcEecCcCCCCCCce
Confidence                                                 1346677777788888888888888877899999999999999


Q ss_pred             hhhhhhhHHHHHhccCcchhhHHhhhcCeeEEEEeecccCCCCccchhcccccccCcccccchhhhcccccccccchHHH
Q psy4157         192 AAVLLMSYKRAQARNIQPLARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGI  271 (441)
Q Consensus       192 a~~ll~s~~~a~~~gl~~~A~~~I~sG~advvla~G~E~ms~~P~~~~~r~g~~~g~~~~~~d~~~~g~~~~~~~~~ma~  271 (441)
                      +++||++++.+++++..+.++.          +..+.-  +..|...                           ......
T Consensus       256 aavvl~s~~~A~~~~~~~~a~i----------~g~~~~--~~~~~~~---------------------------~~~~~~  296 (394)
T PRK06445        256 SYVLLMSKKAVKKYGLKPMAKI----------RSFGFA--GVPPAIM---------------------------GKGPVP  296 (394)
T ss_pred             EEEEEecHHHHHHCCCCceEEE----------EEEEEe--ccCCchh---------------------------cchHHH
Confidence            9999999999999987764431          111110  0011000                           001234


Q ss_pred             HHHHHHHHhCCCHHHHHHH----HHHHHHHHHhhhhCCCCCccccceeeecCCCceeEeccCCCCCCCCHHHHhcCCCcc
Q psy4157         272 TAENIAKKWSISRLEQDEY----AYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVF  347 (441)
Q Consensus       272 ~Ae~~a~~~Gitre~ld~~----A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~g~~~~~~D~~~r~~~t~e~l~~~~~v~  347 (441)
                      .+++..++-|++.+|+|.|    ++..+.... ....|.- ++    .+|..+|.+..   .||-..+.+.++..+-.-+
T Consensus       297 a~~~al~~Agl~~~dId~~e~~d~f~~~~l~~-~e~lg~~-~~----~vN~~GG~la~---Ghp~gatG~~~v~e~~~qL  367 (394)
T PRK06445        297 ASKKALEKAGLSVKDIDLWEINEAFAVVVLYA-IKELGLD-PE----TVNIKGGAIAI---GHPLGATGARIVGTLARQL  367 (394)
T ss_pred             HHHHHHHHcCCCHHHcCEEEecccchHHHHHH-HHHhCCC-cc----ccCCCCCHHHc---CCCccchHHHHHHHHHHHH
Confidence            5688888889999888876    555454443 1223432 21    35677776555   6887777776654433222


Q ss_pred             c-cC---CccccCCCCCCCCCcEEEEEc
Q psy4157         348 Q-KD---GTVTAGNASGINDGAAAVLLM  371 (441)
Q Consensus       348 ~-p~---G~lt~~n~~~~sDGAAAvVLa  371 (441)
                      . ++   |..+.+.....   +.++||.
T Consensus       368 ~~~~~~~gl~~~~~~gg~---g~a~~~e  392 (394)
T PRK06445        368 QIKGKDYGVATLCVGGGQ---GGAVVLE  392 (394)
T ss_pred             HhcCCCEEEEEEcccCCh---hhEEEEE
Confidence            1 11   56666555543   4455553

>PRK07661 acetyl-CoA acetyltransferase; Provisional

Probab=99.88  E-value=2.1e-22  Score=207.55  Aligned_cols=232  Identities=34%  Similarity=0.460  Sum_probs=160.4

Q ss_pred             CchHhhHHHHHHHhCCCHHHHhHHHHhcHHHHHHHHhCCCCCcceeeeEeccC----CCceeeeccCCCCCCccHHHhhh
Q psy4157          37 IHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTR----KGDVVVAKDEYPKANTSVDALQK  112 (441)
Q Consensus        37 ~~mg~~ae~~a~~~~isRe~~D~~a~~s~~ra~~a~~~g~~~~ei~p~~~~~~----~g~~~~~~de~~~~~~~~~~l~~  112 (441)
                      ..||.+||+++++||||||+||+||+.||+||.+++++|+|+.||+||+++++    +|+.. .                
T Consensus       145 ~~m~~~a~~~~~~~g~tre~~a~~av~s~~~a~~n~~ag~~~~ei~pi~~~~~~~~~~~~~~-~----------------  207 (391)
T PRK07661        145 MGMGHTAEQVAVKYGISREDQDAFAVRSHQRAAKALAEGKFADEIVPVDVTLRTVGENNKLQ-E----------------  207 (391)
T ss_pred             hhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccceeeeecccccccccCccc-c----------------
Confidence            46999999999999999999999999999999999999999999999998753    22100 0                


Q ss_pred             cCcccccCCceecCCCCCCCCccccchhhhhcccCceeeecccCCCCCCCHHHHhcCCCccCCCCcccCCCCCCccccch
Q psy4157         113 LRPVFQKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAA  192 (441)
Q Consensus       113 l~p~f~~~g~~t~~~~~~~~dg~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~p~~~~~g~vtagn~s~~~Dgaa  192 (441)
                                                        ....+++||++|+++++|.|++|+|+|..+|++|.+|+|+++|||+
T Consensus       208 ----------------------------------~~~~~~~d~~~rp~~~~e~l~~l~p~f~~~g~lt~~~~~~~~DGAa  253 (391)
T PRK07661        208 ----------------------------------ETITFSQDEGVRADTTLEILGKLRPAFNVKGSVTAGNSSQMSDGAA  253 (391)
T ss_pred             ----------------------------------cceeEecCCCCCCCCCHHHHhcCCCCcCCCCCEeccccCCCCCceE
Confidence                                              0124677888887788888888888887778999999999999999


Q ss_pred             hhhhhhHHHHHhccCcchhhHHhhhcCeeEEEEeecccCCCCccchhcccccccCcccccchhhhcccccccccchHHHH
Q psy4157         193 AVLLMSYKRAQARNIQPLARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGIT  272 (441)
Q Consensus       193 ~~ll~s~~~a~~~gl~~~A~~~I~sG~advvla~G~E~ms~~P~~~~~r~g~~~g~~~~~~d~~~~g~~~~~~~~~ma~~  272 (441)
                      ++||++++.++++|..+.++.  .        ..+.-  +..|..                           ........
T Consensus       254 avvl~s~~~A~~~g~~~~~~i--~--------g~~~~--~~~~~~---------------------------~~~~~~~a  294 (391)
T PRK07661        254 AVLLMDREKAESDGLKPLAKF--R--------SFAVA--GVPPEV---------------------------MGIGPIAA  294 (391)
T ss_pred             EEEEecHHHHHHCCCCceEEE--E--------EEEEe--cCCCcc---------------------------cchHHHHH
Confidence            999999999999998776532  1        11111  001100                           00112356


Q ss_pred             HHHHHHHhCCCHHHHHHH----HHHHHHHHHhhhhCCCCCccccceeeecCCCceeEeccCCCCCCCCHHHHhcCCCccc
Q psy4157         273 AENIAKKWSISRLEQDEY----AYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQ  348 (441)
Q Consensus       273 Ae~~a~~~Gitre~ld~~----A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~g~~~~~~D~~~r~~~t~e~l~~~~~v~~  348 (441)
                      +++..++.|++.+|+|.|    ++..+..... ...|.. .    ..+|..+|.+.+   .||-..+.+.++..+-.-+.
T Consensus       295 ~~~al~~agl~~~did~~ei~d~f~~~~l~~~-e~lg~~-~----~~vN~~GG~~a~---Ghp~gasG~~~~~el~~qL~  365 (391)
T PRK07661        295 IPKALKLAGLELSDIGLFELNEAFASQSIQVI-RELGLD-E----EKVNVNGGAIAL---GHPLGCTGAKLTLSLIHEMK  365 (391)
T ss_pred             HHHHHHHcCCCHHHCCEEEeCCHHHHHHHHHH-HHcCCC-C----CCCCCCCChHHh---CCcHHHHHHHHHHHHHHHHH
Confidence            788899999999999877    6666666541 123332 1    234566665544   67766666666555444333


Q ss_pred             c-C---CccccCCCCCCCCCcEEEEE
Q psy4157         349 K-D---GTVTAGNASGINDGAAAVLL  370 (441)
Q Consensus       349 p-~---G~lt~~n~~~~sDGAAAvVL  370 (441)
                      . +   |..++|....+  |. |+||
T Consensus       366 ~~~~~~g~~~~c~~gg~--g~-a~~~  388 (391)
T PRK07661        366 RRNEQFGIVTMCIGGGM--GA-AGVF  388 (391)
T ss_pred             hcCCCeEEEEEccccCh--hh-EEEE
Confidence            2 2   55666555544  44 4444

>PRK06690 acetyl-CoA acetyltransferase; Provisional

Probab=99.87  E-value=5.3e-22  Score=202.24  Aligned_cols=110  Identities=42%  Similarity=0.645  Sum_probs=96.0

Q ss_pred             CchHhhHHHHHHHhCCCHHHHhHHHHhcHHHHHHHHhCCCCCcceeeeEeccCCCceeeeccCCCCCCccHHHhhhcCcc
Q psy4157          37 IHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTSVDALQKLRPV  116 (441)
Q Consensus        37 ~~mg~~ae~~a~~~~isRe~~D~~a~~s~~ra~~a~~~g~~~~ei~p~~~~~~~g~~~~~~de~~~~~~~~~~l~~l~p~  116 (441)
                      .+||.+||+++++||||||+||+||+.||+|+.+|+++|+|++||+||+     +   |                     
T Consensus       131 ~~~~~~a~~~~~~ygitre~~d~~A~~s~k~a~~a~~n~~~~~ei~~v~-----~---~---------------------  181 (361)
T PRK06690        131 PDMGVAAEYVAERYNITREMQDEYACLSYKRTLQALEKGYIHEEILSFN-----G---L---------------------  181 (361)
T ss_pred             ccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCceeccc-----C---c---------------------
Confidence            3599999999999999999999999999999999999999999999984     1   2                     


Q ss_pred             cccCCceecCCCCCCCCccccchhhhhcccCceeeecccCCCCCCCHHHH-hcCCCccCCCCcccCCCCCCccccchhhh
Q psy4157         117 FQKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEYPKANTTVEAL-QKLRPVFQKDGTVTAGNASGINDGAAAVL  195 (441)
Q Consensus       117 f~~~g~~t~~~~~~~~dg~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~~l~p~~~~~g~vtagn~s~~~Dgaa~~l  195 (441)
                                                         . |+++|.++++|+| ++|||+|.++|++|++|+|+++|||+++|
T Consensus       182 -----------------------------------~-d~~~r~~~~~e~ll~~l~p~~~~~g~lt~~~~~~~~DGAaAvv  225 (361)
T PRK06690        182 -----------------------------------L-DESIKKEMNYERIIKRTKPAFLHNGTVTAGNSCGVNDGACAVL  225 (361)
T ss_pred             -----------------------------------c-ccccCCCCCHHHHhhcCCCcccCCCceeccccCCCCCCeEEEE
Confidence                                               2 5555556677776 77777777778899999999999999999


Q ss_pred             hhhHHHHHhccCcchh
Q psy4157         196 LMSYKRAQARNIQPLA  211 (441)
Q Consensus       196 l~s~~~a~~~gl~~~A  211 (441)
                      |++++.++++|..+.+
T Consensus       226 l~s~e~A~~lg~~p~~  241 (361)
T PRK06690        226 VMEEGQARKLGYKPVL  241 (361)
T ss_pred             EecHHHHHHcCCCceE
Confidence            9999999999987654

>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed

Probab=99.86  E-value=1.7e-21  Score=200.68  Aligned_cols=211  Identities=30%  Similarity=0.402  Sum_probs=149.3

Q ss_pred             CchHhhHHHHHHHhCCCHHHHhHHHHhcHHHHHHHHhCCCCCcceeeeEeccCCCceeeeccCCCCCCccHHHhhhcCcc
Q psy4157          37 IHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTSVDALQKLRPV  116 (441)
Q Consensus        37 ~~mg~~ae~~a~~~~isRe~~D~~a~~s~~ra~~a~~~g~~~~ei~p~~~~~~~g~~~~~~de~~~~~~~~~~l~~l~p~  116 (441)
                      ..|+.+||+++++||||||+||+||+.||++|.+||++|+|++|||||.+++++|..                       
T Consensus       145 ~~~~~~a~~~~~~ygisre~~~~~avksh~~a~~a~~~g~f~~ei~pv~~~~~~~~~-----------------------  201 (387)
T PRK08947        145 GMMGLTAEMLGKMHGISREQQDAFAARSHQRAWAATQEGRFKNEIIPTEGHDADGVL-----------------------  201 (387)
T ss_pred             hHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEeeeeecCCCCCc-----------------------
Confidence            479999999999999999999999999999999999999999999999998654431                       


Q ss_pred             cccCCceecCCCCCCCCccccchhhhhcccCceeeecccCCCCCCCHHHHhcCCCccCC-CCcccCCCCCCccccchhhh
Q psy4157         117 FQKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEYPKANTTVEALQKLRPVFQK-DGTVTAGNASGINDGAAAVL  195 (441)
Q Consensus       117 f~~~g~~t~~~~~~~~dg~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~p~~~~-~g~vtagn~s~~~Dgaa~~l  195 (441)
                                                      +.+.+|+++|.++|+|++.++||+|.+ +|++|.+|+|+++|||+++|
T Consensus       202 --------------------------------~~~~~da~~r~~~t~e~~~~~~~v~~p~~g~lt~~~~~~~sDGAaAvv  249 (387)
T PRK08947        202 --------------------------------KLFDYDEVIRPETTVEALAALRPAFDPVNGTVTAGTSSALSDGASAML  249 (387)
T ss_pred             --------------------------------eeecCCCCCcCCCCHHHHhcCCceeeCCCCcEEccccCCcCCceEEEE
Confidence                                            135667777777888888888888876 78999999999999999999


Q ss_pred             hhhHHHHHhccCcchhhHHhhhcCeeEEEEeecccCCCCccchhcccccccCcccccchhhhcccccccccchHHHHHHH
Q psy4157         196 LMSYKRAQARNIQPLARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAEN  275 (441)
Q Consensus       196 l~s~~~a~~~gl~~~A~~~I~sG~advvla~G~E~ms~~P~~~~~r~g~~~g~~~~~~d~~~~g~~~~~~~~~ma~~Ae~  275 (441)
                      |++++.+.+++..+.++.          +..+.-  +..|..        +               .    ......+++
T Consensus       250 l~s~~~A~~~g~~p~~~I----------~g~~~~--~~~~~~--------~---------------~----~~~~~a~~~  290 (387)
T PRK08947        250 VMSESRAKELGLKPRARI----------RSMAVA--GCDPSI--------M---------------G----YGPVPATQK  290 (387)
T ss_pred             EccHHHHHHCCCCccEEE----------EEEEEc--CcCccc--------c---------------c----ccHHHHHHH
Confidence            999999999887664431          111111  000000        0               0    011235578


Q ss_pred             HHHHhCCCHHHHHHH----HHHHHHHHHhhhhCCCCCccccceeeecCCCceeEeccCCCCCCCCHHHHhcCCCcc
Q psy4157         276 IAKKWSISRLEQDEY----AYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVF  347 (441)
Q Consensus       276 ~a~~~Gitre~ld~~----A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~g~~~~~~D~~~r~~~t~e~l~~~~~v~  347 (441)
                      ..++.|++.+|+|-|    ++....... ..+.|....--  ..+|..+|.+..   .||-..+.+..+..+-...
T Consensus       291 al~~Agl~~~DId~~El~d~F~~~~l~~-~e~lg~~~~~~--~~vN~~GG~la~---GhP~GAtG~~~v~~l~~~L  360 (387)
T PRK08947        291 ALKRAGLSISDIDVFELNEAFAAQSLPC-LKDLGLLDKMD--EKVNLNGGAIAL---GHPLGCSGARISTTLLNLM  360 (387)
T ss_pred             HHHHcCCCHHHCCEEEecccchHHHHHH-HHHcCCCCCCC--CCcCCCCchhhc---CCCccccHHHHHHHHHHHH
Confidence            888899999988776    555555543 12345443200  134666775554   6777777776655444333

>PLN02287 3-ketoacyl-CoA thiolase

Probab=99.85  E-value=4e-21  Score=201.03  Aligned_cols=241  Identities=30%  Similarity=0.429  Sum_probs=169.5

Q ss_pred             CCchHhhHHHHHHHhCCCHHHHhHHHHhcHHHHHHHHhCCCCCcceeeeEeccC--C-CceeeeccCCCCCCccHHHhhh
Q psy4157          36 NIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTR--K-GDVVVAKDEYPKANTSVDALQK  112 (441)
Q Consensus        36 ~~~mg~~ae~~a~~~~isRe~~D~~a~~s~~ra~~a~~~g~~~~ei~p~~~~~~--~-g~~~~~~de~~~~~~~~~~l~~  112 (441)
                      ..+||.++|+++++||||||+||+||+.||++|++++++|+|+.||+||.+++.  + |+.                   
T Consensus       189 ~~~~g~~a~~y~~~yGitrE~la~vAvksh~nAa~np~ag~f~~ei~pv~~~~~~~~~~~~-------------------  249 (452)
T PLN02287        189 LLPMGITSENVAERFGVTREEQDQAAVESHRKAAAATASGKFKDEIVPVHTKIVDPKTGEE-------------------  249 (452)
T ss_pred             CcCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhhhhcCCcccceeeeeccccccccCCc-------------------
Confidence            346999999999999999999999999999999999999999999999988642  1 110                   


Q ss_pred             cCcccccCCceecCCCCCCCCccccchhhhhcccCceeeecccCCCCCCCHHHHhcCCCccCCCCcccCCCCCCccccch
Q psy4157         113 LRPVFQKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAA  192 (441)
Q Consensus       113 l~p~f~~~g~~t~~~~~~~~dg~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~p~~~~~g~vtagn~s~~~Dgaa  192 (441)
                                                        ....+++||++|++++.|+|.++||+|.++|++|++|+|+++|||+
T Consensus       250 ----------------------------------~~~~~~~De~~r~~~~~e~l~~l~~v~~~~g~lt~~~~s~~sDGAa  295 (452)
T PLN02287        250 ----------------------------------KPIVISVDDGIRPNTTLADLAKLKPVFKKNGTTTAGNSSQVSDGAG  295 (452)
T ss_pred             ----------------------------------cceeecccCCCCCCCCHHHHhcCCCccCCCCCEeccccCCcCCceE
Confidence                                              0024678888888889999999999998889999999999999999


Q ss_pred             hhhhhhHHHHHhccCcchhhHHhhhcCeeEEEEeecccCCCCccchhcccccccCcccccchhhhcccccccccchHHHH
Q psy4157         193 AVLLMSYKRAQARNIQPLARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGIT  272 (441)
Q Consensus       193 ~~ll~s~~~a~~~gl~~~A~~~I~sG~advvla~G~E~ms~~P~~~~~r~g~~~g~~~~~~d~~~~g~~~~~~~~~ma~~  272 (441)
                      ++||++++++++++..+++..          +  +.......|..                          . .......
T Consensus       296 alvl~see~A~~~~~~~~a~~----------~--~~~~~~~~~~~--------------------------~-~~~~~~A  336 (452)
T PLN02287        296 AVLLMKRSVAMQKGLPILGVF----------R--SFAAVGVDPAV--------------------------M-GIGPAVA  336 (452)
T ss_pred             EEEEeeHHHHHHCCCCeEEEE----------E--EEeeccCCCcc--------------------------c-hHHHHHH
Confidence            999999999999887654431          1  11000000100                          0 0012346


Q ss_pred             HHHHHHHhCCCHHHHHHH----HHHHHHHHHhhhhCCCCCccccceeeecCCCceeEeccCCCCCCCCHHHHhcCCCccc
Q psy4157         273 AENIAKKWSISRLEQDEY----AYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQ  348 (441)
Q Consensus       273 Ae~~a~~~Gitre~ld~~----A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~g~~~~~~D~~~r~~~t~e~l~~~~~v~~  348 (441)
                      +++..++.|++.+|+|.|    ++....... ....|..     +..+|..+|.+.+   .||-..+.+.++..+-.-+.
T Consensus       337 ~~~al~~Agl~~~DID~~Ei~daFa~~~l~~-~e~lG~~-----~~pvN~sGG~la~---GHp~gAsG~~~v~~l~~qL~  407 (452)
T PLN02287        337 IPAAVKAAGLELDDIDLFEINEAFASQFVYC-CKKLGLD-----PEKVNVNGGAIAL---GHPLGATGARCVATLLHEMK  407 (452)
T ss_pred             HHHHHHHcCCCHHHCCEEEecchHHHHHHHH-HHHcCCC-----ccccCCCCcHHhc---cCcHHHHHHHHHHHHHHHHH
Confidence            788889999999998876    666565553 1123432     2245666776555   67777777766554443332


Q ss_pred             c------CCccccCCCCCCCCCcEEEEEcCHHHHHhcC
Q psy4157         349 K------DGTVTAGNASGINDGAAAVLLMSYKTAQARN  380 (441)
Q Consensus       349 p------~G~lt~~n~~~~sDGAAAvVLaSe~~A~~lg  380 (441)
                      .      -|..++|...+.   +.|+||-+-|.+.++.
T Consensus       408 ~~~~~~~~gl~~~c~ggG~---g~a~~ie~~~~~~~~~  442 (452)
T PLN02287        408 RRGKDCRFGVVSMCIGTGM---GAAAVFERGDSVDELS  442 (452)
T ss_pred             hcCCCCCeeEEEEccccCc---eeEEEEEecCchhhhh
Confidence            1      155666555554   5677887777777763

>PLN02644 acetyl-CoA C-acetyltransferase

Probab=99.85  E-value=1.8e-20  Score=193.59  Aligned_cols=264  Identities=36%  Similarity=0.491  Sum_probs=171.0

Q ss_pred             CCCCCcccc-cccCcCCCccccccccccCCcccccCCCchHhhHHHHHHHhCCCHHHHhHHHHhcHHHHHHHHhCCCCCc
Q psy4157           1 MSQAPHVIN-IRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDE   79 (441)
Q Consensus         1 mS~~P~~~~-~r~g~~~g~~~~~d~~~~~~l~d~~~~~~mg~~ae~~a~~~~isRe~~D~~a~~s~~ra~~a~~~g~~~~   79 (441)
                      ||+.|+..+ .|.+..+++....+.+....++++|....|+.+||+.+++||+|||++|+|++.||+|+.+++..|.|+.
T Consensus       117 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~yG~tre~la~vav~s~~~a~~a~~~~~~~~  196 (394)
T PLN02644        117 MSNAPKYLPEARKGSRLGHDTVVDGMLKDGLWDVYNDFGMGVCAELCADQYSISREEQDAYAIQSYERAIAAQEAGAFAW  196 (394)
T ss_pred             cCCCcccccccccccccccchhhhhccccccccccCCCcHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHcCCCcc
Confidence            788886432 3433334432222222234556777677899999999999999999999999999999999999999999


Q ss_pred             ceeeeEeccCCCceeeeccCCCCCCccHHHhhhcCcccccCCceecCCCCCCCCccccchhhhhcccCceeeecccCCCC
Q psy4157          80 EIVPVVISTRKGDVVVAKDEYPKANTSVDALQKLRPVFQKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEYPKA  159 (441)
Q Consensus        80 ei~p~~~~~~~g~~~~~~de~~~~~~~~~~l~~l~p~f~~~g~~t~~~~~~~~dg~~~~~~~~~~~~~~~~~~~d~~~~~  159 (441)
                      ||+|++|.++++...                                                      ..+++||++| 
T Consensus       197 ei~~~~v~~~~~~~~------------------------------------------------------~~~~~de~~~-  221 (394)
T PLN02644        197 EIVPVEVPGGRGRPS------------------------------------------------------VIVDKDEGLG-  221 (394)
T ss_pred             ceeeEEeccCCCCCc------------------------------------------------------eEeecCCCcC-
Confidence            999999864322100                                                      1356788886 


Q ss_pred             CCCHHHHhcCCCccCC-CCcccCCCCCCccccchhhhhhhHHHHHhccCcchhhHHhhhcCeeEEEEeecccCCCCccch
Q psy4157         160 NTTVEALQKLRPVFQK-DGTVTAGNASGINDGAAAVLLMSYKRAQARNIQPLARIAIKSGDATAIVAGGQECMSQAPHVI  238 (441)
Q Consensus       160 ~~~~~~~~~l~p~~~~-~g~vtagn~s~~~Dgaa~~ll~s~~~a~~~gl~~~A~~~I~sG~advvla~G~E~ms~~P~~~  238 (441)
                      .++.+.|.+|||+|++ +|+||++|+|+++||++++||++++.+.+++..+.++.          +..+ .. ...|.. 
T Consensus       222 ~~~~~~l~~l~p~f~~~~g~vt~~~~~~~~DGaaavvl~s~~~A~~~~~~~~a~I----------~g~~-~~-~~~~~~-  288 (394)
T PLN02644        222 KFDPAKLRKLRPSFKEDGGSVTAGNASSISDGAAALVLVSGEKALELGLQVIAKI----------RGYA-DA-AQAPEL-  288 (394)
T ss_pred             CCCHHHHhCCCCcccCCCCcEeccccCCCCcceEEEEeccHHHHHHCCCCeEEEE----------EEEE-Ec-CCCCcc-
Confidence            6888999999999987 59999999999999999999999999998887654321          1111 00 000100 


Q ss_pred             hcccccccCcccccchhhhcccccccccchHHHHHHHHHHHhCCCHHHHHHH----HHHHHHHHHhhhhCCCCCccccce
Q psy4157         239 NIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEY----AYQSQVKTAKAQEGGYFDEEIVPV  314 (441)
Q Consensus       239 ~~r~g~~~g~~~~~~d~~~~g~~~~~~~~~ma~~Ae~~a~~~Gitre~ld~~----A~~S~~~A~~A~~~g~f~~ei~Pv  314 (441)
                                      .    ..      .....+++..++.|++.+|+|-|    ++........ ...|. .    +.
T Consensus       289 ----------------~----~~------~~~~a~~~al~~Agi~~~Did~~Ei~d~f~~~~l~~~-e~lg~-~----~~  336 (394)
T PLN02644        289 ----------------F----TT------APALAIPKALKHAGLEASQVDYYEINEAFSVVALANQ-KLLGL-D----PE  336 (394)
T ss_pred             ----------------c----ch------hHHHHHHHHHHHcCCCHHHCCEEEeCcHHHHHHHHHH-HHhCC-C----cc
Confidence                            0    00      01135688888899999988766    5544444431 12232 1    22


Q ss_pred             eeecCCCceeEeccCCCCCCCCHHHHhcCCCccc-cC---CccccCCCCCCCCCcEEEEE
Q psy4157         315 VISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQ-KD---GTVTAGNASGINDGAAAVLL  370 (441)
Q Consensus       315 ~v~~~~g~~~~~~D~~~r~~~t~e~l~~~~~v~~-p~---G~lt~~n~~~~sDGAAAvVL  370 (441)
                      .+|..+|.+.+   .|+-..+.+.++..+-.-+. ++   |..+.++...+   +.++||
T Consensus       337 ~vN~~GG~l~~---Ghp~gasG~~~~~~~~~~l~~~~~~~g~~~~~~~gg~---g~a~~~  390 (394)
T PLN02644        337 KVNVHGGAVSL---GHPIGCSGARILVTLLGVLRSKNGKYGVAGICNGGGG---ASAIVV  390 (394)
T ss_pred             ccCCCCChHhh---CCCHHHHHHHHHHHHHHHHHhcCCCeEEEEEeccCCc---eeEEEE
Confidence            34666665544   56666666665544433332 11   44555554443   334444

>PRK05790 putative acyltransferase; Provisional

Probab=99.84  E-value=2.7e-20  Score=192.27  Aligned_cols=264  Identities=44%  Similarity=0.633  Sum_probs=170.6

Q ss_pred             CCCCCccc-ccccCcCCCccccccccccCCcccccCCCchHhhHHHHHHHhCCCHHHHhHHHHhcHHHHHHHHhCCCCCc
Q psy4157           1 MSQAPHVI-NIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDE   79 (441)
Q Consensus         1 mS~~P~~~-~~r~g~~~g~~~~~d~~~~~~l~d~~~~~~mg~~ae~~a~~~~isRe~~D~~a~~s~~ra~~a~~~g~~~~   79 (441)
                      ||+.|+.. ..+.+..++.....+.+.+++.++.+.+..|+.+||+.+++||+|||++|+||+.||++|++++.+|+|++
T Consensus       118 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~y~~~yG~tre~la~vav~~~~~A~~~~~~g~~~~  197 (393)
T PRK05790        118 MSQAPHVLPGSRWGQKMGDVELVDTMIHDGLTDAFNGYHMGITAENLAEQYGITREEQDEFALASQQKAEAAIKAGRFKD  197 (393)
T ss_pred             cccCcccccccccccccCcchhhhhhcccccccccCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcc
Confidence            67777532 22333333321222323344455555566899999999999999999999999999999999999999999


Q ss_pred             ceeeeEeccCCCceeeeccCCCCCCccHHHhhhcCcccccCCceecCCCCCCCCccccchhhhhcccCceeeecccCCCC
Q psy4157          80 EIVPVVISTRKGDVVVAKDEYPKANTSVDALQKLRPVFQKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEYPKA  159 (441)
Q Consensus        80 ei~p~~~~~~~g~~~~~~de~~~~~~~~~~l~~l~p~f~~~g~~t~~~~~~~~dg~~~~~~~~~~~~~~~~~~~d~~~~~  159 (441)
                      ||+|+.+.+++++.                                                       ..++.|+++|.
T Consensus       198 ~i~P~~~~~~~~~~-------------------------------------------------------~~~~~d~~~~~  222 (393)
T PRK05790        198 EIVPVTIKQRKGDP-------------------------------------------------------VVVDTDEHPRP  222 (393)
T ss_pred             eEeeEEecCCCCCc-------------------------------------------------------eEecCCCCCCC
Confidence            99999886533221                                                       23567888888


Q ss_pred             CCCHHHHhcCCCccCCCCcccCCCCCCccccchhhhhhhHHHHHhccCcchhhHHhhhcCeeEEEEeecccCCCCccchh
Q psy4157         160 NTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQARNIQPLARIAIKSGDATAIVAGGQECMSQAPHVIN  239 (441)
Q Consensus       160 ~~~~~~~~~l~p~~~~~g~vtagn~s~~~Dgaa~~ll~s~~~a~~~gl~~~A~~~I~sG~advvla~G~E~ms~~P~~~~  239 (441)
                      +.+.|.|.+++|+|.+.|.+|.+|+|+++|||+++||++++++++++..+.++.          +..+.-  +..|..  
T Consensus       223 ~~~~e~l~~~~~v~~~~g~lt~~d~~~~~DGAaavvl~s~e~a~~~~~~~~~~I----------~g~~~~--~~~~~~--  288 (393)
T PRK05790        223 DTTAESLAKLRPAFDKDGTVTAGNASGINDGAAAVVVMSEAKAKELGLTPLARI----------VSYAVA--GVDPAI--  288 (393)
T ss_pred             CCCHHHHhCCCCccCCCCCEeCCcCCCCCCceEEEEEecHHHHHHCCCCeeEEE----------EEEEEc--cCCCCc--
Confidence            889999999999998788999999999999999999999999999887654321          111111  011100  


Q ss_pred             cccccccCcccccchhhhcccccccccchHHHHHHHHHHHhCCCHHHHHHH----HHHHHHHHHhhhhCCCCCcccccee
Q psy4157         240 IRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEY----AYQSQVKTAKAQEGGYFDEEIVPVV  315 (441)
Q Consensus       240 ~r~g~~~g~~~~~~d~~~~g~~~~~~~~~ma~~Ae~~a~~~Gitre~ld~~----A~~S~~~A~~A~~~g~f~~ei~Pv~  315 (441)
                                           .    .......+++..++.|++.+|+|-+    ++........ ...|. .    +..
T Consensus       289 ---------------------~----~~~~~~a~~~a~~~Agi~~~did~~e~~d~f~~~~l~~~-e~lg~-~----~~p  337 (393)
T PRK05790        289 ---------------------M----GIGPVPAIRKALEKAGWSLADLDLIEINEAFAAQALAVE-KELGL-D----PEK  337 (393)
T ss_pred             ---------------------c----chhHHHHHHHHHHHcCCCHHHCCEEEeCcHHHHHHHHHH-HHhCC-C----hhh
Confidence                                 0    0012345688888999999998766    4444443321 11232 2    123


Q ss_pred             eecCCCceeEeccCCCCCCCCHHHHhcCCCcccc----CCccccCCCCCCCCCcEEEEE
Q psy4157         316 ISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQK----DGTVTAGNASGINDGAAAVLL  370 (441)
Q Consensus       316 v~~~~g~~~~~~D~~~r~~~t~e~l~~~~~v~~p----~G~lt~~n~~~~sDGAAAvVL  370 (441)
                      +|..+|....   .|+-..+.+.++..+-.-+..    -|..+.+..+..  |+ ++||
T Consensus       338 vN~~GG~l~~---Ghp~gatG~~~~~e~~~qL~~~~~~~gl~~~~~~~g~--g~-~~~~  390 (393)
T PRK05790        338 VNVNGGAIAL---GHPIGASGARILVTLLHEMKRRGAKKGLATLCIGGGQ--GV-ALIV  390 (393)
T ss_pred             cCCCcchhhh---CcchhhhHHHHHHHHHHHHHhcCCCeEEEEEeccCCc--ee-EEEE
Confidence            4556665444   566655565554433222211    155666555543  44 4444

>PRK07851 acetyl-CoA acetyltransferase; Provisional

Probab=99.76  E-value=5.6e-18  Score=175.64  Aligned_cols=118  Identities=50%  Similarity=0.736  Sum_probs=105.4

Q ss_pred             CCchHhhHHHHHHHhCCCHHHHhHHHHhcHHHHHHHHhCCCCCcceeeeEeccCCCceeeeccCCCCCCccHHHhhhcCc
Q psy4157          36 NIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTSVDALQKLRP  115 (441)
Q Consensus        36 ~~~mg~~ae~~a~~~~isRe~~D~~a~~s~~ra~~a~~~g~~~~ei~p~~~~~~~g~~~~~~de~~~~~~~~~~l~~l~p  115 (441)
                      ..+||.++|+++++||++||+||+|++.||++|..|+++++|+.+|+||.+|+.   .                      
T Consensus       170 ~~amg~~a~~~~~~yg~~re~~~~~a~~s~~~a~~A~~n~~~a~~~~p~~~p~~---~----------------------  224 (406)
T PRK07851        170 YIAMGQTAENVAQLTGISREEQDEWGVRSQNRAEEAIANGFFEREITPVTLPDG---T----------------------  224 (406)
T ss_pred             cccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCccceeeeecCCC---c----------------------
Confidence            457899999999999999999999999999999999999999999999988741   1                      


Q ss_pred             ccccCCceecCCCCCCCCccccchhhhhcccCceeeecccCCCCCCCHHHHhcCCCccCCCCcccCCCCCCccccchhhh
Q psy4157         116 VFQKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVL  195 (441)
Q Consensus       116 ~f~~~g~~t~~~~~~~~dg~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~p~~~~~g~vtagn~s~~~Dgaa~~l  195 (441)
                                                        .+.+|+++|.+.|+|++.++||++.++|++|.+|.|.++|||++++
T Consensus       225 ----------------------------------~~~~d~~~r~~~t~e~v~~s~~v~~P~~~lt~~d~~~~~DGaaa~v  270 (406)
T PRK07851        225 ----------------------------------VVSTDDGPRAGTTYEKVSQLKPVFRPDGTVTAGNACPLNDGAAAVV  270 (406)
T ss_pred             ----------------------------------eeCCCCCccCCcCHHHHhcCCCccCCCCcEecCcCCccCCceeEEE
Confidence                                              2456777777888999999999998889999999999999999999


Q ss_pred             hhhHHHHHhccCcchhh
Q psy4157         196 LMSYKRAQARNIQPLAR  212 (441)
Q Consensus       196 l~s~~~a~~~gl~~~A~  212 (441)
                      |++++++++++..+.++
T Consensus       271 l~s~e~A~~~~~~~~a~  287 (406)
T PRK07851        271 IMSDTKARELGLTPLAR  287 (406)
T ss_pred             EccHHHHHHcCCCccEE
Confidence            99999999999876543

>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases

Probab=99.72  E-value=8.7e-17  Score=165.83  Aligned_cols=130  Identities=57%  Similarity=0.824  Sum_probs=112.5

Q ss_pred             ccCCcccccCCCchHhhHHHHHHHhCCCHHHHhHHHHhcHHHHHHHHhCCCCCcceeeeEeccCCCceeeeccCCCCCCc
Q psy4157          26 VFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANT  105 (441)
Q Consensus        26 ~~~~l~d~~~~~~mg~~ae~~a~~~~isRe~~D~~a~~s~~ra~~a~~~g~~~~ei~p~~~~~~~g~~~~~~de~~~~~~  105 (441)
                      ...|+.+++....|+..+++.+++||||||++++||+.||++|+.++.+|+|++||+|+.+.+++++             
T Consensus       140 ~~~g~~~~~~~~~~a~~a~~y~~~yG~t~e~la~vav~~~~~A~~n~~~g~~~~~i~P~a~~~~~~~-------------  206 (386)
T TIGR01930       140 LKDGLTDPLNGLSMGLTAENLAKKYGISREEQDEYALRSHQRAAKAWEEGLFKDEIVPVSVKGRKGP-------------  206 (386)
T ss_pred             cCccccccccCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEEeccCCCC-------------
Confidence            3456667766778999999999999999999999999999999999999999999999977543322             


Q ss_pred             cHHHhhhcCcccccCCceecCCCCCCCCccccchhhhhcccCceeeecccCCCCCCCHHHHhcCCCccCCCCcccCCCCC
Q psy4157         106 SVDALQKLRPVFQKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNAS  185 (441)
Q Consensus       106 ~~~~l~~l~p~f~~~g~~t~~~~~~~~dg~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~p~~~~~g~vtagn~s  185 (441)
                                                                 +.|.+|+..|.+.|+|++.+.+|++.+.|++|..+.|
T Consensus       207 -------------------------------------------~~~~~da~~r~~~t~e~v~~s~~i~~P~~~l~~~d~~  243 (386)
T TIGR01930       207 -------------------------------------------VTVSTDEGIRPNTTLEKLAKLKPAFDPNGTVTAGNSS  243 (386)
T ss_pred             -------------------------------------------eEeCCCCCCCCCCCHHHHhCCCCCcCCCCeeeCCccC
Confidence                                                       2356677777788999999999999888899999999


Q ss_pred             CccccchhhhhhhHHHHHhccCcchh
Q psy4157         186 GINDGAAAVLLMSYKRAQARNIQPLA  211 (441)
Q Consensus       186 ~~~Dgaa~~ll~s~~~a~~~gl~~~A  211 (441)
                      .++|||+++||++++.+++++..+.+
T Consensus       244 ~~~dGAaa~vl~s~~~A~~~~~~~~~  269 (386)
T TIGR01930       244 PLNDGAAALLLMSEERAKELGLTPLA  269 (386)
T ss_pred             CCCcceeEEEEecHHHHHHCCCCccE
Confidence            99999999999999999999876544

This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt

>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine

Probab=99.70  E-value=2.9e-16  Score=161.88  Aligned_cols=130  Identities=62%  Similarity=0.905  Sum_probs=111.1

Q ss_pred             ccCCcccccCCCchHhhHHHHHHHhCCCHHHHhHHHHhcHHHHHHHHhCCCCCcceeeeEeccCCCceeeeccCCCCCCc
Q psy4157          26 VFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANT  105 (441)
Q Consensus        26 ~~~~l~d~~~~~~mg~~ae~~a~~~~isRe~~D~~a~~s~~ra~~a~~~g~~~~ei~p~~~~~~~g~~~~~~de~~~~~~  105 (441)
                      ...++.+++....|+..+++.+++||+|||++|+||+.||+||.++...|+|.+||+|+.+..++++.            
T Consensus       139 ~~~~~~~~~~~~~~a~~a~~~~~~yg~tre~la~vav~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~~------------  206 (386)
T cd00751         139 LDDGLTDPFTGLSMGITAENVAEKYGISREEQDEFALRSHQRAAAAQEAGRFKDEIVPVEVPGRKGPV------------  206 (386)
T ss_pred             cccccccccCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCcCeEEEEEeccCCCCe------------
Confidence            34566666666789999999999999999999999999999999999999999999999886543322            


Q ss_pred             cHHHhhhcCcccccCCceecCCCCCCCCccccchhhhhcccCceeeecccCCCCCCCHHHHhcCCCccCCCCcccCCCCC
Q psy4157         106 SVDALQKLRPVFQKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNAS  185 (441)
Q Consensus       106 ~~~~l~~l~p~f~~~g~~t~~~~~~~~dg~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~p~~~~~g~vtagn~s  185 (441)
                                                                  .+.+|++.|.++|+|++.+++|++.+.|++|..|.|
T Consensus       207 --------------------------------------------~~~~~a~~r~~~t~e~v~~s~~i~~p~g~l~~~d~~  242 (386)
T cd00751         207 --------------------------------------------VVDRDEGPRPDTTLEKLAKLKPAFKKDGTVTAGNAS  242 (386)
T ss_pred             --------------------------------------------EeCCCCCCCCCCCHHHHhCCCCCcCCCCcEeCCcCC
Confidence                                                        355677777778888888888888877899999999


Q ss_pred             CccccchhhhhhhHHHHHhccCcchh
Q psy4157         186 GINDGAAAVLLMSYKRAQARNIQPLA  211 (441)
Q Consensus       186 ~~~Dgaa~~ll~s~~~a~~~gl~~~A  211 (441)
                      +++|||++++|++++++.+++..+.+
T Consensus       243 ~~~dGaaavvl~s~~~a~~~~~~~~~  268 (386)
T cd00751         243 GINDGAAAVLLMSEEKAKELGLKPLA  268 (386)
T ss_pred             CCCcceEEEEEecHHHHHHCCCCeeE
Confidence            99999999999999999988876543

They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.

>PRK07801 acetyl-CoA acetyltransferase; Provisional

Probab=99.64  E-value=6.3e-16  Score=159.23  Aligned_cols=110  Identities=41%  Similarity=0.573  Sum_probs=96.9

Q ss_pred             CCchHhhHHHHHHHhCCCHHHHhHHHHhcHHHHHHHHhCCCCCcceeeeEeccCCCceeeeccCCCCCCccHHHhhhcCc
Q psy4157          36 NIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTSVDALQKLRP  115 (441)
Q Consensus        36 ~~~mg~~ae~~a~~~~isRe~~D~~a~~s~~ra~~a~~~g~~~~ei~p~~~~~~~g~~~~~~de~~~~~~~~~~l~~l~p  115 (441)
                      ..+|+.++|+.+++||||||+||+||+.||++|..+.++|+|.++|+|+.-                             
T Consensus       154 ~~~~~~~a~~~~~~yG~tre~~a~vav~~~~~a~~n~~ag~~~~~~~p~~~-----------------------------  204 (382)
T PRK07801        154 EVSQFRGAELIAEKWGISREEMERFALESHRRAFAAIRAGRFDNEIVPVGG-----------------------------  204 (382)
T ss_pred             CCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccccC-----------------------------
Confidence            457888899999999999999999999999999999999999999998831                             


Q ss_pred             ccccCCceecCCCCCCCCccccchhhhhcccCceeeecccCCCCCCCHHHHhcCCCccCCCCcccCCCCCCccccchhhh
Q psy4157         116 VFQKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVL  195 (441)
Q Consensus       116 ~f~~~g~~t~~~~~~~~dg~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~p~~~~~g~vtagn~s~~~Dgaa~~l  195 (441)
                                                         +.+||++| ++|+|++.++||++. .|.+|..|+|+++|||+++|
T Consensus       205 -----------------------------------~~~d~~~~-~~t~e~~~~~~~i~~-~~pl~~~d~~~~~DGaaa~i  247 (382)
T PRK07801        205 -----------------------------------VTVDEGPR-ETSLEKMAGLKPLVE-GGRLTAAVASQISDGASAVL  247 (382)
T ss_pred             -----------------------------------ccccCCcC-cCCHHHHhcCCCCCC-CCCcccccCCCCCCceEEEE
Confidence                                               34678887 688899999999883 47899999999999999999


Q ss_pred             hhhHHHHHhccCcchh
Q psy4157         196 LMSYKRAQARNIQPLA  211 (441)
Q Consensus       196 l~s~~~a~~~gl~~~A  211 (441)
                      |++++++++++..+.+
T Consensus       248 l~s~e~a~~~~~~~~~  263 (382)
T PRK07801        248 LASERAVKRHGLTPRA  263 (382)
T ss_pred             EecHHHHHHCCCCccE
Confidence            9999999999876543

>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine

Probab=99.34  E-value=1.5e-11  Score=127.34  Aligned_cols=107  Identities=36%  Similarity=0.601  Sum_probs=90.5

Q ss_pred             HHHHHHhCCCHHHHhHHHHhcHHHHHHHHhCCCCCcceeeeEeccCCCceeeeccCCCCCCccHHHhhhcCcccccCCce
Q psy4157          44 ENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTSVDALQKLRPVFQKDGTV  123 (441)
Q Consensus        44 e~~a~~~~isRe~~D~~a~~s~~ra~~a~~~g~~~~ei~p~~~~~~~g~~~~~~de~~~~~~~~~~l~~l~p~f~~~g~~  123 (441)
                      +.++..|+ +||++|.|++.||.++..+++.|.++++|.||.+..++|...                             
T Consensus       129 ~~~~~~~~-~r~~~~~~a~~s~~~~~~~~~~G~~~e~~a~v~~~~~~~~~~-----------------------------  178 (393)
T cd00826         129 DVLINKYG-MRACPDAFALAGQAGAEAAEKDGRFKDEFAKFGVKGRKGDIH-----------------------------  178 (393)
T ss_pred             HHHHHHhC-ChhhccHHHHHHHHHHHHHHHcCCCHHHEEEEEEecCCCCEE-----------------------------
Confidence            44688999 999999999999999999999999999999998876433222                             


Q ss_pred             ecCCCCCCCCccccchhhhhcccCceeeecccCCC--CCCCHHHHhcCCCccCCCCcccCCCCCCccccchhhhhhhHHH
Q psy4157         124 TAGNASGINDGAAAGKLYLFTRKGDVVVAKDEYPK--ANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKR  201 (441)
Q Consensus       124 t~~~~~~~~dg~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~l~p~~~~~g~vtagn~s~~~Dgaa~~ll~s~~~  201 (441)
                                                 ..+|++.+  .++|+|++.+++|+|.+++.+|..|+|+++|||+++||+|+++
T Consensus       179 ---------------------------a~~np~a~~~~~~t~e~~~~~~~i~~~~~pl~~~~~~~~~DGAAA~vl~S~~~  231 (393)
T cd00826         179 ---------------------------SDADEYIQFGDEASLDEIAKLRPAFDKEDFLTAGNACGLNDGAAAAILMSEAE  231 (393)
T ss_pred             ---------------------------EecCCCCCCCCCCCHHHHhcCCCccCCCCCEechhcCCcCCCeEEEEEecHHH
Confidence                                       23344443  4588999999999987678999999999999999999999999


Q ss_pred             HHhccC
Q psy4157         202 AQARNI  207 (441)
Q Consensus       202 a~~~gl  207 (441)
                      ++++++
T Consensus       232 a~~l~l  237 (393)
T cd00826         232 AQKHGL  237 (393)
T ss_pred             HHHcCC
Confidence            999887

There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.

>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2

Probab=99.22  E-value=9.5e-12  Score=108.03  Aligned_cols=60  Identities=35%  Similarity=0.570  Sum_probs=49.8

Q ss_pred             CCceEEEEEEEeecCCCCcCCCChHHHHHHHHHHcCCCCCCccEEEecCCChhhhhhhhc
Q psy4157         381 IQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATSGGIANRRQE  440 (441)
Q Consensus       381 ~~p~a~I~~~~~~~~~p~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~~~~~~~  440 (441)
                      ++|+++|+++..++.+|..++.+|..|++++|+++|++++|||+|||||+|++.....+|
T Consensus         1 l~pla~i~~~~~~~~~P~~~~~~p~~A~~~al~~ag~~~~did~~Ei~EaFA~~~l~~~~   60 (123)
T PF02803_consen    1 LKPLARIVGYASAGVDPEDMGLGPVPAARKALERAGLTPDDIDVIEINEAFAAQVLAFLE   60 (123)
T ss_dssp             --ESEEEEEEEEEE--GGGGGGTHHHHHHHHHHHHT--GGGESEEEE--SBHHHHHHHHH
T ss_pred             CCeEEEEEEEEEEecCHHHhCchHHHHHHHHHHHhCCCccccchhhccchhhhHHHHhhc
Confidence            479999999999999999999999999999999999999999999999999999887665

3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C ....

>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II

Probab=99.04  E-value=3.5e-10  Score=117.07  Aligned_cols=76  Identities=32%  Similarity=0.441  Sum_probs=64.8

Q ss_pred             CCCCCCCCcEEEEEcCHHHHHhcCCCceEEEEEEEeecC-----CCCcCCCChHHHHHHHHHHcCCCCCCccEEEecCCC
Q psy4157         357 NASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGV-----EPTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATS  431 (441)
Q Consensus       357 n~~~~sDGAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~-----~p~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~F  431 (441)
                      ++..++|||+++||.+++.|++.+.+++++|++++...+     .|.....+...+++++|+++|++++|||++|.|+++
T Consensus       225 ~g~~~gEGAaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~Al~~Agi~~~dId~ve~h~tg  304 (407)
T TIGR03150       225 DGFVMGEGAGVLVLEELEHAKARGAKIYAEIVGYGMSGDAYHITAPAPEGEGAARAMRAALKDAGINPEDVDYINAHGTS  304 (407)
T ss_pred             CcEEEeceEEEEEEeeHHHHHHCCCeEEEEEEEEEECCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHhHCCEEeCcCCC
Confidence            455679999999999999999999999999999987653     122233446789999999999999999999999999


Q ss_pred             h
Q psy4157         432 G  432 (441)
Q Consensus       432 t  432 (441)
                      |
T Consensus       305 t  305 (407)
T TIGR03150       305 T  305 (407)
T ss_pred             C
Confidence            9

FabB sequences should fall well below the noise cutoff of this model.

>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional

Probab=98.98  E-value=1.4e-09  Score=113.67  Aligned_cols=75  Identities=27%  Similarity=0.316  Sum_probs=65.3

Q ss_pred             CCCCCcEEEEEcCHHHHHhcCCCceEEEEEEEeecC-----CCCcCCCChHHHHHHHHHH-cCCCCCCccEEEecCCChh
Q psy4157         360 GINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGV-----EPTLMGTGPIPAVNAVLAK-AGWSKEEVGYFNRVATSGG  433 (441)
Q Consensus       360 ~~sDGAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~-----~p~~~~~~~~~Aa~~al~~-AGl~~~DID~~Ei~D~Ft~  433 (441)
                      .++|||+++||.+++.|++.|.+++++|++++...+     .|.....++..|++++|++ |||+++|||++|+|++++.
T Consensus       236 ~~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~ai~~Al~~~Agi~~~dId~ie~hgtgt~  315 (421)
T PTZ00050        236 VMGEGAGILVLEELEHALRRGAKIYAEIRGYGSSSDAHHITAPHPDGRGARRCMENALKDGANININDVDYVNAHATSTP  315 (421)
T ss_pred             eeccceEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCChHHHHHHHHHHHHhccCCChhhCCEEECCCccCC
Confidence            469999999999999999999999999999998764     2333445678899999999 9999999999999999984


Q ss_pred             h
Q psy4157         434 I  434 (441)
Q Consensus       434 ~  434 (441)
                      +
T Consensus       316 ~  316 (421)
T PTZ00050        316 I  316 (421)
T ss_pred             C
Confidence            4

>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=98.87  E-value=3.1e-09  Score=110.93  Aligned_cols=74  Identities=30%  Similarity=0.375  Sum_probs=63.4

Q ss_pred             CCCCcEEEEEcCHHHHHhcCCCceEEEEEEEeecCC-----CCcCCCChHHHHHHHHHHcCCCCCCccEEEecCCChhh
Q psy4157         361 INDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVE-----PTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATSGGI  434 (441)
Q Consensus       361 ~sDGAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~~-----p~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~  434 (441)
                      ++|||+++||.+++.|++.|.+++++|.+++...+.     |.....+...+++++|+++||+++|||++|.|+++|..
T Consensus       242 ~gEGaa~lvLe~~~~A~~rg~~i~a~i~G~~~~~d~~~~~~~~~~~~~~~~a~~~Al~~Agi~p~dId~i~~hgtgt~~  320 (424)
T PRK06333        242 MGEGAGILVIETLEHALARGAPPLAELVGYGTSADAYHMTAGPEDGEGARRAMLIALRQAGIPPEEVQHLNAHATSTPV  320 (424)
T ss_pred             EecceEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHHHCCEEeccCCCCcc
Confidence            799999999999999999999999999999876532     21223345789999999999999999999999999873

>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional

Probab=98.86  E-value=3.2e-09  Score=107.94  Aligned_cols=76  Identities=29%  Similarity=0.386  Sum_probs=67.8

Q ss_pred             CCCCCcEEEEEcCHHHHHhcCCCceEEEEEEEeecCC-----CCcCCCChHHHHHHHHHHcCCCCCCccEEEecCCChhh
Q psy4157         360 GINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVE-----PTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATSGGI  434 (441)
Q Consensus       360 ~~sDGAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~~-----p~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~  434 (441)
                      .++|||+++||.+++.|+++|.+|+++|++++..++.     |...+.++..|++++|+++||+++|||++|.|+++|..
T Consensus       159 v~gEGAa~lvLes~~~A~~rG~~i~a~I~g~~~~~d~~~~~~p~p~~~~~~~ai~~AL~~Agl~p~dIdyIeaHgtgT~~  238 (342)
T PRK14691        159 VMGEGAGLLIIEELEHALARGAKPLAEIVGYGTSADAYHMTSGAEDGDGAYRAMKIALRQAGITPEQVQHLNAHATSTPV  238 (342)
T ss_pred             cccceEEEEEEeeHHHHHhCCCCceEEEEEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEecCCCCcC
Confidence            4899999999999999999999999999999988754     33445667899999999999999999999999999975


Q ss_pred             h
Q psy4157         435 A  435 (441)
Q Consensus       435 ~  435 (441)
                      .
T Consensus       239 ~  239 (342)
T PRK14691        239 G  239 (342)
T ss_pred             C
Confidence            3

>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism

Probab=98.83  E-value=1.2e-08  Score=104.80  Aligned_cols=86  Identities=23%  Similarity=0.314  Sum_probs=70.5

Q ss_pred             CCchHhhHHHHHHHhCCCHHHHhHHHHhcHHHHHHHHhCCCCCcceeeeEeccCCCceeeeccCCCCCCccHHHhhhcCc
Q psy4157          36 NIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTSVDALQKLRP  115 (441)
Q Consensus        36 ~~~mg~~ae~~a~~~~isRe~~D~~a~~s~~ra~~a~~~g~~~~ei~p~~~~~~~g~~~~~~de~~~~~~~~~~l~~l~p  115 (441)
                      ...|+..+++.+++||||||++|+||+.||++|+++... +|++   |                                
T Consensus       137 ~~~~al~a~~~~~~~g~t~e~~~~va~~~~~~A~~np~A-~~~~---~--------------------------------  180 (375)
T cd00829         137 PALYALAARRYMHRYGTTREDLAKVAVKNHRNAARNPYA-QFRK---P--------------------------------  180 (375)
T ss_pred             HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCChh-hcCC---C--------------------------------
Confidence            346999999999999999999999999999999887543 5543   2                                


Q ss_pred             ccccCCceecCCCCCCCCccccchhhhhcccCceeeecccCCCCCCCHHHHhcCCCccCCCCcccCCCCCCccccchhhh
Q psy4157         116 VFQKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVL  195 (441)
Q Consensus       116 ~f~~~g~~t~~~~~~~~dg~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~p~~~~~g~vtagn~s~~~Dgaa~~l  195 (441)
                                                                   .++|.+.++||++.   -+|..|+|.++|||+++|
T Consensus       181 ---------------------------------------------~t~d~~~~~~~i~~---pl~~~~~~~~~DGaaa~v  212 (375)
T cd00829         181 ---------------------------------------------ITVEDVLNSRMIAD---PLRLLDCCPVSDGAAAVV  212 (375)
T ss_pred             ---------------------------------------------CCHHHHhcCCcccC---CCchhhcCCCCCceeEEE
Confidence                                                         33345555667764   489999999999999999


Q ss_pred             hhhHHHHHhc
Q psy4157         196 LMSYKRAQAR  205 (441)
Q Consensus       196 l~s~~~a~~~  205 (441)
                      |+++++++++
T Consensus       213 l~s~~~a~~~  222 (375)
T cd00829         213 LASEERAREL  222 (375)
T ss_pred             EecHHHHhhc
Confidence            9999999887

The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.

>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=98.74  E-value=1.2e-08  Score=105.94  Aligned_cols=78  Identities=27%  Similarity=0.390  Sum_probs=67.3

Q ss_pred             CCCCCCCCCcEEEEEcCHHHHHhcCCCceEEEEEEEeecC-----CCCcCCCChHHHHHHHHHHcCCCCCCccEEEecCC
Q psy4157         356 GNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGV-----EPTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVAT  430 (441)
Q Consensus       356 ~n~~~~sDGAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~-----~p~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~  430 (441)
                      .+++.++|||+++||.+++.|++++.+++++|++++...+     .|.....+...++++||+++|++++|||++|.|++
T Consensus       225 ~dG~~~geGAaavvL~~~~~A~~~g~~~~a~I~g~~~~~d~~~~~~~~~~~~~~~~a~~~Al~~agi~~~dId~v~~hgt  304 (411)
T PRK07314        225 RDGFVMGEGAGILVLEELEHAKARGAKIYAEVVGYGMTGDAYHMTAPAPDGEGAARAMKLALKDAGINPEDIDYINAHGT  304 (411)
T ss_pred             CCCEeEEceEEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHHHCCEEEcccc
Confidence            3778899999999999999999999999999999987653     33334445788999999999999999999999998


Q ss_pred             Chh
Q psy4157         431 SGG  433 (441)
Q Consensus       431 Ft~  433 (441)
                      +|.
T Consensus       305 gt~  307 (411)
T PRK07314        305 STP  307 (411)
T ss_pred             CCc
Confidence            874

>PRK08256 lipid-transfer protein; Provisional

Probab=98.74  E-value=3.1e-08  Score=102.60  Aligned_cols=90  Identities=14%  Similarity=0.133  Sum_probs=74.1

Q ss_pred             CchHhhHHHHHHHhCCCHHHHhHHHHhcHHHHHHHHhCCCCCcceeeeEeccCCCceeeeccCCCCCCccHHHhhhcCcc
Q psy4157          37 IHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTSVDALQKLRPV  116 (441)
Q Consensus        37 ~~mg~~ae~~a~~~~isRe~~D~~a~~s~~ra~~a~~~g~~~~ei~p~~~~~~~g~~~~~~de~~~~~~~~~~l~~l~p~  116 (441)
                      ..|+..+++..++||+|||++++||+.||++|+..-. +.|                                       
T Consensus       147 ~~~a~~a~~y~~~~G~t~e~~a~vav~~~~~A~~np~-A~~---------------------------------------  186 (391)
T PRK08256        147 RMFGGAGREHMEKYGTTAETFAKIGVKARRHAANNPY-AQF---------------------------------------  186 (391)
T ss_pred             HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhhhcCCh-hhc---------------------------------------
Confidence            3689999999999999999999999999999987631 111                                       


Q ss_pred             cccCCceecCCCCCCCCccccchhhhhcccCceeeecccCCCCCCCHHHHhcCCCccCCCCcccCCCCCCccccchhhhh
Q psy4157         117 FQKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLL  196 (441)
Q Consensus       117 f~~~g~~t~~~~~~~~dg~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~p~~~~~g~vtagn~s~~~Dgaa~~ll  196 (441)
                                                               |.++|+|.+.+.+|++.+   +|..+.|+++|||+++||
T Consensus       187 -----------------------------------------~~~~t~e~~~~s~~i~~P---l~~~d~~~~~DGAaA~il  222 (391)
T PRK08256        187 -----------------------------------------RDEYTLEDVLASPMIWGP---LTRLQCCPPTCGAAAAIV  222 (391)
T ss_pred             -----------------------------------------CCCCCHHHHhcCCcccCC---CcHhhcCCCCCCeEEEEE
Confidence                                                     123566777777887764   899999999999999999


Q ss_pred             hhHHHHHhccCcch
Q psy4157         197 MSYKRAQARNIQPL  210 (441)
Q Consensus       197 ~s~~~a~~~gl~~~  210 (441)
                      +++++++++++.+.
T Consensus       223 ~s~~~a~~~~~~~~  236 (391)
T PRK08256        223 CSEEFARKHGLDRA  236 (391)
T ss_pred             ecHHHHHhcCCCCC
Confidence            99999999887543

>PTZ00455 3-ketoacyl-CoA thiolase; Provisional

Probab=98.68  E-value=7.5e-08  Score=101.08  Aligned_cols=49  Identities=22%  Similarity=0.373  Sum_probs=41.9

Q ss_pred             ecccCCCCCCCHHHH--hcCCCccCCCCcccCCCCCCccccchhhhhhhHHHHHhccCcc
Q psy4157         152 AKDEYPKANTTVEAL--QKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQARNIQP  209 (441)
Q Consensus       152 ~~d~~~~~~~~~~~~--~~l~p~~~~~g~vtagn~s~~~Dgaa~~ll~s~~~a~~~gl~~  209 (441)
                      ..|+.+|   +.|.|  ..++|.|      +..|+|+++|||+++||+|+++++++++.+
T Consensus       230 ~~d~~~~---~~e~l~s~~i~~pl------~~~d~s~~sDGAaA~vl~See~A~~l~~~p  280 (438)
T PTZ00455        230 CTGASDK---NPKFLGNETYKPFL------RMTDCSQVSDGGAGLVLASEEGLQKMGLSP  280 (438)
T ss_pred             ecccccc---chhhhcCCcccCcC------chhcCCCccccceEEEEecHHHHHhcCCCC
Confidence            4577777   56778  7788875      599999999999999999999999998876

>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase

Probab=98.59  E-value=6.7e-08  Score=101.51  Aligned_cols=78  Identities=26%  Similarity=0.377  Sum_probs=65.4

Q ss_pred             CCCCCCCCcEEEEEcCHHHHHhcCCCceEEEEEEEeecCC-----CCcCCCChHHHHHHHHHHcCCCCCCccEEEecCCC
Q psy4157         357 NASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVE-----PTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATS  431 (441)
Q Consensus       357 n~~~~sDGAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~~-----p~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~F  431 (441)
                      +++.++|||+++||.+++.|++.|.+++++|.+++...+.     |.....+...|+++||++|||+++|||++|.|+++
T Consensus       249 ~G~~~gEGaaalVLe~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p~~~~~~~~~a~~~Al~~Agi~~~dId~ve~hgtg  328 (437)
T PLN02836        249 DGFVIGEGAGVLVLEELEHAKRRGAKIYAEVRGYGMSGDAHHITQPHEDGRGAVLAMTRALQQSGLHPNQVDYVNAHATS  328 (437)
T ss_pred             CCeeeecCEEEEEEeeHHHHHHCCCceEEEEEeeeecCCCCCCcCCCcchHHHHHHHHHHHHHcCCCHhHcCEEEccCCc
Confidence            5667899999999999999999999999999999876542     21122234679999999999999999999999999


Q ss_pred             hhh
Q psy4157         432 GGI  434 (441)
Q Consensus       432 t~~  434 (441)
                      |..
T Consensus       329 t~~  331 (437)
T PLN02836        329 TPL  331 (437)
T ss_pred             CcC
Confidence            953

>PRK06064 acetyl-CoA acetyltransferase; Provisional

Probab=98.55  E-value=3.6e-07  Score=94.58  Aligned_cols=88  Identities=25%  Similarity=0.287  Sum_probs=71.0

Q ss_pred             chHhhHHHHHHHhCCCHHHHhHHHHhcHHHHHHHHhCCCCCcceeeeEeccCCCceeeeccCCCCCCccHHHhhhcCccc
Q psy4157          38 HMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTSVDALQKLRPVF  117 (441)
Q Consensus        38 ~mg~~ae~~a~~~~isRe~~D~~a~~s~~ra~~a~~~g~~~~ei~p~~~~~~~g~~~~~~de~~~~~~~~~~l~~l~p~f  117 (441)
                      .|+..+++.+++||+|||+++++++.||++|++... ++|+                                       
T Consensus       146 ~~al~a~~~~~~yG~s~e~~a~~a~~~~~~A~~np~-a~~~---------------------------------------  185 (389)
T PRK06064        146 LYALIARRYMHKYGTTEEDLALVAVKNHYNGSKNPY-AQFQ---------------------------------------  185 (389)
T ss_pred             HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHhhCcH-hhhC---------------------------------------
Confidence            588899999999999999999999999999986643 1221                                       


Q ss_pred             ccCCceecCCCCCCCCccccchhhhhcccCceeeecccCCCCCCCHHHHhcCCCccCCCCcccCCCCCCccccchhhhhh
Q psy4157         118 QKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLM  197 (441)
Q Consensus       118 ~~~g~~t~~~~~~~~dg~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~p~~~~~g~vtagn~s~~~Dgaa~~ll~  197 (441)
                                                               .++++|.+.+.+|++.+   +|..|.|.++|||+++||+
T Consensus       186 -----------------------------------------~~~t~~~~~~s~~i~~P---l~~~d~~~~~dGAaa~vL~  221 (389)
T PRK06064        186 -----------------------------------------KEITVEQVLNSPPVADP---LKLLDCSPITDGAAAVILA  221 (389)
T ss_pred             -----------------------------------------CCCCHHHHhcCCcccCC---CchhhcCCCCCcceEEEEe
Confidence                                                     12455666667777653   8899999999999999999


Q ss_pred             hHHHHHhccCcc
Q psy4157         198 SYKRAQARNIQP  209 (441)
Q Consensus       198 s~~~a~~~gl~~  209 (441)
                      ++++|.+++..+
T Consensus       222 s~~~A~~~~~~~  233 (389)
T PRK06064        222 SEEKAKEYTDTP  233 (389)
T ss_pred             cHHHHHHhcCCC
Confidence            999998876433

>PRK06289 acetyl-CoA acetyltransferase; Provisional

Probab=98.52  E-value=3.3e-07  Score=95.34  Aligned_cols=87  Identities=18%  Similarity=0.233  Sum_probs=67.7

Q ss_pred             hHhhHHHHHHHhCCCHHHHhHHHHhcHHHHHH---HHhCCCCCcceeeeEeccCCCceeeeccCCCCCCccHHHhhhcCc
Q psy4157          39 MGITAENIAKKWSISRLEQDEYAYQSQVKTAK---AQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTSVDALQKLRP  115 (441)
Q Consensus        39 mg~~ae~~a~~~~isRe~~D~~a~~s~~ra~~---a~~~g~~~~ei~p~~~~~~~g~~~~~~de~~~~~~~~~~l~~l~p  115 (441)
                      |+..|++..++||+|||++++||+.||++|+.   |+..+++..  .|+++                             
T Consensus       153 ~al~a~~y~~~yG~t~e~la~va~~~~~~A~~NP~A~~~~~~~~--~~~~~-----------------------------  201 (403)
T PRK06289        153 FARVADEYDRRYGLDEEHLRAIAEINFANARRNPNAQTRGWAFP--DEATN-----------------------------  201 (403)
T ss_pred             HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHccCcHhhcCccccc--cccch-----------------------------
Confidence            79999999999999999999999999999997   887665531  01110                             


Q ss_pred             ccccCCceecCCCCCCCCccccchhhhhcccCceeeecccCCCCCCCHHHHhcCCCccCCCCcccCCCCCCccccchhhh
Q psy4157         116 VFQKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVL  195 (441)
Q Consensus       116 ~f~~~g~~t~~~~~~~~dg~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~p~~~~~g~vtagn~s~~~Dgaa~~l  195 (441)
                                                            |+..           ++|++  .+.+|..|.|+++|||+++|
T Consensus       202 --------------------------------------~d~~-----------~s~~i--~~Pl~~~d~~~~~DGAaA~v  230 (403)
T PRK06289        202 --------------------------------------DDDA-----------TNPVV--EGRLRRQDCSQVTDGGAGVV  230 (403)
T ss_pred             --------------------------------------hhhh-----------cCCcc--cCCCchhhcCCCCCceeEEE
Confidence                                                  0000           23444  24589999999999999999


Q ss_pred             hhhHHHHHhccC
Q psy4157         196 LMSYKRAQARNI  207 (441)
Q Consensus       196 l~s~~~a~~~gl  207 (441)
                      |++++++++++.
T Consensus       231 l~s~e~a~~l~~  242 (403)
T PRK06289        231 LASDAYLRDYAD  242 (403)
T ss_pred             EEcHHHHHHhcc
Confidence            999999998875

>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=98.51  E-value=1.3e-07  Score=98.65  Aligned_cols=78  Identities=31%  Similarity=0.455  Sum_probs=65.5

Q ss_pred             CCCCCCCcEEEEEcCHHHHHhcCCCceEEEEEEEeecCC-----CCcCCCChHHHHHHHHHHcCCCCCCccEEEecCCCh
Q psy4157         358 ASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVE-----PTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATSG  432 (441)
Q Consensus       358 ~~~~sDGAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~~-----p~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft  432 (441)
                      .-.++|||+++||.+++.|++.|.+++++|.+++..++.     |.....+...+++++|+++||+++|||++|.|+++|
T Consensus       229 G~~~gEGaaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~a~~~Al~~agi~~~did~ie~hgtgt  308 (414)
T PRK08722        229 GFVLGDGAGMMVLEEYEHAKARGAKIYAELVGFGMSGDAYHMTSPSEDGSGGALAMEAAMRDAGVTGEQIGYVNAHGTST  308 (414)
T ss_pred             ceEeeceEEEEEEccHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCcchHHHHHHHHHHHHHcCCCHHHcCEEEccCccC
Confidence            345899999999999999999999999999999976542     222233457899999999999999999999999998


Q ss_pred             hhh
Q psy4157         433 GIA  435 (441)
Q Consensus       433 ~~~  435 (441)
                      ...
T Consensus       309 ~~~  311 (414)
T PRK08722        309 PAG  311 (414)
T ss_pred             CCC
Confidence            753

>PRK06157 acetyl-CoA acetyltransferase; Validated

Probab=98.49  E-value=1.7e-07  Score=97.40  Aligned_cols=87  Identities=21%  Similarity=0.208  Sum_probs=68.7

Q ss_pred             chHhhHHHHHHHhCCCHHHH----hHHHHhcHHHHHHHHhCCCCCcceeeeEeccCCCceeeeccCCCCCCccHHHhhhc
Q psy4157          38 HMGITAENIAKKWSISRLEQ----DEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTSVDALQKL  113 (441)
Q Consensus        38 ~mg~~ae~~a~~~~isRe~~----D~~a~~s~~ra~~a~~~g~~~~ei~p~~~~~~~g~~~~~~de~~~~~~~~~~l~~l  113 (441)
                      .|+..+++..++||||||++    +++++.||++|...-                                         
T Consensus       147 ~~al~a~~~~~~yG~t~e~~~~~~a~vav~~~~~A~~np-----------------------------------------  185 (398)
T PRK06157        147 NFAQLASAYAAKYGVSREDLKRAMAHVSVKSHANGARNP-----------------------------------------  185 (398)
T ss_pred             HHHHHHHHHHHHhCCCHHHHcccccHHHHHHHHHHhcCC-----------------------------------------
Confidence            47889999999999999999    599999998887421                                         


Q ss_pred             CcccccCCceecCCCCCCCCccccchhhhhcccCceeeecccCCCCCCCHHHHhcCCCccCCCCcccCCCCCCccccchh
Q psy4157         114 RPVFQKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAA  193 (441)
Q Consensus       114 ~p~f~~~g~~t~~~~~~~~dg~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~p~~~~~g~vtagn~s~~~Dgaa~  193 (441)
                                                              |.++|.++|+|.+.++||++.+-   +.-|.|+++|||++
T Consensus       186 ----------------------------------------~A~~r~~~t~e~v~~s~~v~~Pl---~~~d~~~~~DGAaA  222 (398)
T PRK06157        186 ----------------------------------------KAHLRKAVTEEQVLKAPMIAGPL---GLFDCCGVSDGAAA  222 (398)
T ss_pred             ----------------------------------------hhhcCCCCCHHHHhcCCcccCCC---chhccCCCCCccEE
Confidence                                                    12223346667777777777643   34499999999999


Q ss_pred             hhhhhHHHHHhccCc
Q psy4157         194 VLLMSYKRAQARNIQ  208 (441)
Q Consensus       194 ~ll~s~~~a~~~gl~  208 (441)
                      +||+|++++++++..
T Consensus       223 ~vl~s~~~A~~l~~~  237 (398)
T PRK06157        223 AIVTTPEIARALGKK  237 (398)
T ss_pred             EEEecHHHHHhhCCC
Confidence            999999999998863

>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction

Probab=98.48  E-value=1.9e-07  Score=89.92  Aligned_cols=82  Identities=26%  Similarity=0.303  Sum_probs=68.4

Q ss_pred             CCCCCCcEEEEEcCHHHHHhcCCCceEEEEEEEeecCCCC----cCCCChHHHHHHHHHHcCCCCCCccEEEecCCChhh
Q psy4157         359 SGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPT----LMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATSGGI  434 (441)
Q Consensus       359 ~~~sDGAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~~p~----~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~  434 (441)
                      +.++|||+|+||.+++.+++++.+|+.+|.++......+.    ........+++++|+++|++++|||++++|++++.+
T Consensus        98 ~~~gdGAaa~vL~~~~~a~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ag~~~~did~~~~h~~~~~~  177 (254)
T cd00327          98 FVFGDGAAAAVVESEEHALRRGAHPQAEIVSTAATFDGASMVPAVSGEGLARAARKALEGAGLTPSDIDYVEAHGTGTPI  177 (254)
T ss_pred             eeecceEEEEEECcHHHHHHCCCceEEEEEEEEEcCCCCCCCCCCChHHHHHHHHHHHHHcCCCHHHCCEEEccCCcCcc
Confidence            6789999999999999999999899999999876544333    223456789999999999999999999999999987


Q ss_pred             hhhhhc
Q psy4157         435 ANRRQE  440 (441)
Q Consensus       435 ~~~~~~  440 (441)
                      ...+.|
T Consensus       178 ~~~~~~  183 (254)
T cd00327         178 GDAVEL  183 (254)
T ss_pred             ccHHHH
Confidence            665543

Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.

>PRK06365 acetyl-CoA acetyltransferase; Provisional

Probab=98.47  E-value=1.4e-07  Score=98.91  Aligned_cols=89  Identities=18%  Similarity=0.184  Sum_probs=72.2

Q ss_pred             chHhhHHHHHHHhCCCHHHHhHHHHhcHHHHHHHHhCCCCCcceeeeEeccCCCceeeeccCCCCCCccHHHhhhcCccc
Q psy4157          38 HMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTSVDALQKLRPVF  117 (441)
Q Consensus        38 ~mg~~ae~~a~~~~isRe~~D~~a~~s~~ra~~a~~~g~~~~ei~p~~~~~~~g~~~~~~de~~~~~~~~~~l~~l~p~f  117 (441)
                      .|+..+++..++||+|||++++|++.||++|..    +-|+.+                                     
T Consensus       160 ~~al~a~ry~~~yG~t~e~la~vav~~~~~A~~----NP~A~~-------------------------------------  198 (430)
T PRK06365        160 YYAMMAVRHMYEFGTTVEQLAKVSVKNHGNAIH----NPFAQS-------------------------------------  198 (430)
T ss_pred             HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHhh----CcHhhc-------------------------------------
Confidence            388999999999999999999999999999987    222211                                     


Q ss_pred             ccCCceecCCCCCCCCccccchhhhhcccCceeeecccCCCCCCCHHHHhcCCCccCCCCcccCCCCCCccccchhhhhh
Q psy4157         118 QKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLM  197 (441)
Q Consensus       118 ~~~g~~t~~~~~~~~dg~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~p~~~~~g~vtagn~s~~~Dgaa~~ll~  197 (441)
                                                              |.+.|+|++.+.++++.   -+|..|.|+++|||+++||+
T Consensus       199 ----------------------------------------~~~~t~e~v~~s~~i~~---Plt~~d~~~~sDGAaAvvl~  235 (430)
T PRK06365        199 ----------------------------------------PMKITVEDVRKSPMVSY---PLTRLDVCAMSDGAACAILA  235 (430)
T ss_pred             ----------------------------------------CCCCCHHHHhcCCcccc---CcchhhcCCcCCceEEEEEe
Confidence                                                    11345666667766653   48999999999999999999


Q ss_pred             hHHHHHhccCcch
Q psy4157         198 SYKRAQARNIQPL  210 (441)
Q Consensus       198 s~~~a~~~gl~~~  210 (441)
                      |++++++++.++.
T Consensus       236 See~A~~l~~~pv  248 (430)
T PRK06365        236 SEDKAFEITDKPV  248 (430)
T ss_pred             cHHHHHhcCCCCe
Confidence            9999999887664

>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases

Probab=98.37  E-value=6.2e-07  Score=92.97  Aligned_cols=79  Identities=24%  Similarity=0.231  Sum_probs=66.9

Q ss_pred             CCCCCCCCCcEEEEEcCHHHHHhcCCCceEEEEEEEeecCCCCc----CCCChHHHHHHHHHHcCCCCCCccEEEecCCC
Q psy4157         356 GNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTL----MGTGPIPAVNAVLAKAGWSKEEVGYFNRVATS  431 (441)
Q Consensus       356 ~n~~~~sDGAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~~p~~----~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~F  431 (441)
                      .++..++|||++|||.+++.|++.|.+++++|.+++...+....    ...+...+++++|+++|++++|||++|.|++.
T Consensus       224 ~~G~~~gEGAaalvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~a~~~Al~~Agi~~~dId~i~~hgtg  303 (407)
T cd00828         224 RDGFVEAEGAGVLVLERAELALARGAPIYGRVAGTASTTDGAGRSVPAGGKGIARAIRTALAKAGLSLDDLDVISAHGTS  303 (407)
T ss_pred             CCcEEeecceEEEEEeeHHHHHHCCCeEEEEEEEEEeccCCCCCCCCCChHHHHHHHHHHHHHcCCCHHHcCEEeccccc
Confidence            46677899999999999999999999999999999876543222    12456789999999999999999999999998


Q ss_pred             hhh
Q psy4157         432 GGI  434 (441)
Q Consensus       432 t~~  434 (441)
                      |..
T Consensus       304 t~~  306 (407)
T cd00828         304 TPA  306 (407)
T ss_pred             Ccc
Confidence            854

They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.

>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=98.30  E-value=9.6e-07  Score=92.34  Aligned_cols=76  Identities=24%  Similarity=0.278  Sum_probs=64.6

Q ss_pred             CCCCCCcEEEEEcCHHHHHhcCCCceEEEEEEEeecC-----CCCcCCCChHHHHHHHHHHcCCCCCCccEEEecCCChh
Q psy4157         359 SGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGV-----EPTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATSGG  433 (441)
Q Consensus       359 ~~~sDGAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~-----~p~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~  433 (441)
                      -.++||+++|||.+++.|++.|.+++++|++++...+     .|.....+...+++++|+++|++++|||++|.|.+.|.
T Consensus       238 ~v~gEGaa~vvLe~~~~A~~rg~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~a~~~Al~~agi~~~did~ie~hgtgt~  317 (418)
T PRK07910        238 FVFGEGGALMVIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGERAGHAMTRAIELAGLTPGDIDHVNAHATGTS  317 (418)
T ss_pred             EeeeceEEEEEEeeHHHHHhCCCcEEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHhCCCHHHCCEEEcCCcCCC
Confidence            3478999999999999999999999999999997653     23333345678999999999999999999999999875


Q ss_pred             h
Q psy4157         434 I  434 (441)
Q Consensus       434 ~  434 (441)
                      .
T Consensus       318 ~  318 (418)
T PRK07910        318 V  318 (418)
T ss_pred             C
Confidence            3

>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=98.29  E-value=1.2e-06  Score=90.63  Aligned_cols=75  Identities=24%  Similarity=0.367  Sum_probs=63.0

Q ss_pred             CCCCCCcEEEEEcCHHHHHhcCCCceEEEEEEEeecC-----CCCcCCCChHHHHHHHHHHcCCCCCCccEEEecCCChh
Q psy4157         359 SGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGV-----EPTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATSGG  433 (441)
Q Consensus       359 ~~~sDGAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~-----~p~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~  433 (441)
                      -.++|||+++||.+++.|++.+.+++++|.+++...+     .|.....+...|++++|+++||+++|||++|.|..-|.
T Consensus       206 ~v~gEGaa~lvLe~~~~A~~rg~~i~a~I~g~~~~~d~~~~~~~~~~~~~~~~ai~~Al~~agi~p~dId~i~~hgtgt~  285 (381)
T PRK05952        206 LVLGEGGAILVLESAELAQKRGAKIYGQILGFGLTCDAYHMSAPEPDGKSAIAAIQQCLARSGLTPEDIDYIHAHGTATR  285 (381)
T ss_pred             ccccccEEEEEEeeHHHHHhCCCceEEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCHHHeeEEEccCCCCC
Confidence            3589999999999999999999999999999997643     12223345678999999999999999999998887654

>PRK12578 acetyl-CoA acetyltransferase; Provisional

Probab=98.28  E-value=1.8e-06  Score=89.24  Aligned_cols=86  Identities=12%  Similarity=0.140  Sum_probs=67.4

Q ss_pred             HhhHHHHHHHhCCCHHHHhHHHHhcHHHHHHHHhCCCCCcceeeeEeccCCCceeeeccCCCCCCccHHHhhhcCccccc
Q psy4157          40 GITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTSVDALQKLRPVFQK  119 (441)
Q Consensus        40 g~~ae~~a~~~~isRe~~D~~a~~s~~ra~~a~~~g~~~~ei~p~~~~~~~g~~~~~~de~~~~~~~~~~l~~l~p~f~~  119 (441)
                      +..++....+||+|||++++|++.||++|..+. .++|+++|+|.+|.+                               
T Consensus       146 a~~a~~~m~~~g~t~e~~a~va~~~~~~A~~np-~a~~~~~i~~e~v~~-------------------------------  193 (385)
T PRK12578        146 ALYATRHMAVYGTTEEQMALVSVKAHKYGAMNP-KAHFQKPVTVEEVLK-------------------------------  193 (385)
T ss_pred             HHHHHHHHHHhCcCHHHHHHHHHHHHHHHhcCC-hhhcCCCCCHHHHhc-------------------------------
Confidence            345778888999999999999999999999886 678887776543310                               


Q ss_pred             CCceecCCCCCCCCccccchhhhhcccCceeeecccCCCCCCCHHHHhcCCCccCCCCcccCCCCCCccccchhhhhhhH
Q psy4157         120 DGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSY  199 (441)
Q Consensus       120 ~g~~t~~~~~~~~dg~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~p~~~~~g~vtagn~s~~~Dgaa~~ll~s~  199 (441)
                                                                       -|++..   -+|..|.|+++|||+++||+++
T Consensus       194 -------------------------------------------------s~~i~~---Pl~~~d~~~~~DGAaA~vl~s~  221 (385)
T PRK12578        194 -------------------------------------------------SRAISW---PIKLLDSCPISDGSATAIFASE  221 (385)
T ss_pred             -------------------------------------------------CCccCC---CccHhhcCCcCCCeEEEEEecH
Confidence                                                             011111   1589999999999999999999


Q ss_pred             HHHHhccCcc
Q psy4157         200 KRAQARNIQP  209 (441)
Q Consensus       200 ~~a~~~gl~~  209 (441)
                      +++++++..+
T Consensus       222 e~A~~l~~~~  231 (385)
T PRK12578        222 EKVKELKIDS  231 (385)
T ss_pred             HHHHhcCCCC
Confidence            9999988644

>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated

Probab=98.26  E-value=1.4e-06  Score=90.85  Aligned_cols=79  Identities=23%  Similarity=0.294  Sum_probs=66.0

Q ss_pred             CCCCCCCCCcEEEEEcCHHHHHhcCCCceEEEEEEEeecCCCCc---CCCChHHHHHHHHHHcCCCCCCccEEEecCCCh
Q psy4157         356 GNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTL---MGTGPIPAVNAVLAKAGWSKEEVGYFNRVATSG  432 (441)
Q Consensus       356 ~n~~~~sDGAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~~p~~---~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft  432 (441)
                      .++..++|||+++||.+++.|++.|.+++++|.+++...+--..   ...+...+++++|+++|++++|||++|.|.++|
T Consensus       232 ~dG~v~gEGaaalvLe~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p~~~~~~~a~~~Al~~Agi~~~dId~v~~hgtgt  311 (410)
T PRK07103        232 RDGFIYGEACGAVVLESAESARRRGARPYAKLLGWSMRLDANRGPDPSLEGEMRVIRAALRRAGLGPEDIDYVNPHGTGS  311 (410)
T ss_pred             CCCeeEeeeEEEEEEccHHHHHHCCCceEEEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEccCCCC
Confidence            46677899999999999999999999999999999976432111   122346799999999999999999999999999


Q ss_pred             hh
Q psy4157         433 GI  434 (441)
Q Consensus       433 ~~  434 (441)
                      ..
T Consensus       312 ~~  313 (410)
T PRK07103        312 PL  313 (410)
T ss_pred             CC
Confidence            75

>smart00825 PKS_KS Beta-ketoacyl synthase

Probab=98.25  E-value=2.4e-06  Score=89.00  Aligned_cols=78  Identities=19%  Similarity=0.187  Sum_probs=63.8

Q ss_pred             CCCCCCCCcEEEEEcCHHHHHhcCCCceEEEEEEEeecCCCCc--C---CCChHHHHHHHHHHcCCCCCCccEEEecCCC
Q psy4157         357 NASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTL--M---GTGPIPAVNAVLAKAGWSKEEVGYFNRVATS  431 (441)
Q Consensus       357 n~~~~sDGAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~~p~~--~---~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~F  431 (441)
                      ++..++|||+++||.+++.|++.+.+++++|.+++........  .   ..+...+++++|+++|++++|||+++.|++.
T Consensus       229 ~g~~~geGAaalVLe~~e~A~~~g~~i~a~I~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~dId~i~~h~tg  308 (424)
T smart00825      229 DGYVRGEGVGVVVLKRLSDALRDGDPILAVIRGSAVNQDGRSNGLTAPSGPAQARLIRQALARAGVDPADVDYVEAHGTG  308 (424)
T ss_pred             CcccccceEEEEEEccHHHHHHCCCeEEEEEEEEEEeCCCCCCCCCCcCHHHHHHHHHHHHHHhCCCHHHccEEEeeCCC
Confidence            4556899999999999999999998889999999876542211  1   1234679999999999999999999999888


Q ss_pred             hhh
Q psy4157         432 GGI  434 (441)
Q Consensus       432 t~~  434 (441)
                      +..
T Consensus       309 t~~  311 (424)
T smart00825      309 TPL  311 (424)
T ss_pred             CCC
Confidence            763

The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.

>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II

Probab=98.13  E-value=4.2e-06  Score=86.52  Aligned_cols=77  Identities=31%  Similarity=0.429  Sum_probs=63.6

Q ss_pred             CCCCCCCCcEEEEEcCHHHHHhcCCCceEEEEEEEeecCC-----CCcCCCChHHHHHHHHHHcCCCCCCccEEEecCCC
Q psy4157         357 NASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVE-----PTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATS  431 (441)
Q Consensus       357 n~~~~sDGAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~~-----p~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~F  431 (441)
                      ++..++|||+++||.+.+.|++.+.+++++|.+++...+.     |.....+...+++++|+++|++++|||++|.|...
T Consensus       225 ~g~~~geGA~a~vL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~agi~~~dId~v~~h~tg  304 (406)
T cd00834         225 DGFVLGEGAGVLVLESLEHAKARGAKIYAEILGYGASSDAYHITAPDPDGEGAARAMRAALADAGLSPEDIDYINAHGTS  304 (406)
T ss_pred             CCEeeeccEEEEEEecHHHHHHCCCeEEEEEEEEEecccCCCCCCCCCCcHHHHHHHHHHHHHcCCCHHHCCEEeccccc
Confidence            3456899999999999999999998899999999865431     22223455789999999999999999999999987


Q ss_pred             hh
Q psy4157         432 GG  433 (441)
Q Consensus       432 t~  433 (441)
                      +.
T Consensus       305 t~  306 (406)
T cd00834         305 TP  306 (406)
T ss_pred             Cc
Confidence            74

KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.

>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations

Probab=98.13  E-value=5.8e-06  Score=85.81  Aligned_cols=79  Identities=16%  Similarity=0.167  Sum_probs=64.0

Q ss_pred             CCCCCCCCcEEEEEcCHHHHHhcCCCceEEEEEEEeecCCCCc-----CCCChHHHHHHHHHHcCCCCCCccEEEecCCC
Q psy4157         357 NASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTL-----MGTGPIPAVNAVLAKAGWSKEEVGYFNRVATS  431 (441)
Q Consensus       357 n~~~~sDGAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~~p~~-----~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~F  431 (441)
                      ++..++|||+++||.+++.|++.+.+++++|.+++........     ...+...+++++|+++|++++|||++|.|...
T Consensus       229 ~g~~~geGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~p~~~~~~~a~~~al~~Agi~~~did~i~~hgtg  308 (421)
T cd00833         229 DGYVRGEGVGVVVLKRLSDALRDGDRIYAVIRGSAVNQDGRTKGITAPSGEAQAALIRRAYARAGVDPSDIDYVEAHGTG  308 (421)
T ss_pred             CCeeeeceEEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCcCCCHHHHHHHHHHHHHHhCCCHHHCcEEEeeCCC
Confidence            3445899999999999999999998889999999866432211     12234689999999999999999999999998


Q ss_pred             hhhh
Q psy4157         432 GGIA  435 (441)
Q Consensus       432 t~~~  435 (441)
                      |...
T Consensus       309 t~~~  312 (421)
T cd00833         309 TPLG  312 (421)
T ss_pred             CCCC
Confidence            7653

PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.

>PRK07516 acetyl-CoA acetyltransferase; Provisional

Probab=98.04  E-value=5.8e-06  Score=85.62  Aligned_cols=33  Identities=9%  Similarity=0.039  Sum_probs=31.8

Q ss_pred             chHhhHHHHHHHhCCCHHHHhHHHHhcHHHHHH
Q psy4157          38 HMGITAENIAKKWSISRLEQDEYAYQSQVKTAK   70 (441)
Q Consensus        38 ~mg~~ae~~a~~~~isRe~~D~~a~~s~~ra~~   70 (441)
                      .|+..|++.+++||+|||+++++|+.||++|+.
T Consensus       146 ~~a~~a~~y~~~yg~~~e~~a~vav~~~~~A~~  178 (389)
T PRK07516        146 VFGRIAQAYFQRYGDQSDALAMIAAKNHANGVA  178 (389)
T ss_pred             HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhc
Confidence            599999999999999999999999999999987

>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction

Probab=97.97  E-value=1.1e-05  Score=80.97  Aligned_cols=80  Identities=24%  Similarity=0.251  Sum_probs=64.2

Q ss_pred             CCCCCCCCCcEEEEEcCHHHHHhcCCCceEEEEEEEeecCCCCcC-----CCChHHHHHHHHHHcCCCCCCccEEEecCC
Q psy4157         356 GNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLM-----GTGPIPAVNAVLAKAGWSKEEVGYFNRVAT  430 (441)
Q Consensus       356 ~n~~~~sDGAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~~p~~~-----~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~  430 (441)
                      .+++.++|||+|+||.+++.+++.+.+++++|.++..........     ......+++++|+++|++++|||+++.|..
T Consensus       154 ~~g~~~gdGaaA~vL~~~~~a~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~agl~~~did~~~~h~~  233 (332)
T cd00825         154 ADGFVFGDGAGALVVEELEHALARGAHIYAEIVGTAATIDGAGMGAFAPSAEGLARAAKEALAVAGLTVWDIDYLVAHGT  233 (332)
T ss_pred             CCCEEEEeeEEEEEECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCcCHHHHHHHHHHHHHHcCCCHhHCCEEEccCC
Confidence            367788999999999999999999988889999987543321111     123467999999999999999999999999


Q ss_pred             Chhhh
Q psy4157         431 SGGIA  435 (441)
Q Consensus       431 Ft~~~  435 (441)
                      .+.+.
T Consensus       234 ~~~~~  238 (332)
T cd00825         234 GTPIG  238 (332)
T ss_pred             CCCCC
Confidence            87543

Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).

>PRK06059 lipid-transfer protein; Provisional

Probab=97.92  E-value=1.6e-05  Score=82.65  Aligned_cols=53  Identities=21%  Similarity=0.198  Sum_probs=41.7

Q ss_pred             ccCCCCCCCHHHHhcCCCccCCCCcccCCCCCCccccchhhhhhhHHHHHhc--cCcc
Q psy4157         154 DEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQAR--NIQP  209 (441)
Q Consensus       154 d~~~~~~~~~~~~~~l~p~~~~~g~vtagn~s~~~Dgaa~~ll~s~~~a~~~--gl~~  209 (441)
                      |.+.|.++|+|.+.+.+|++.+   ++..|+|+++|||+++||+++++++++  +..+
T Consensus       181 ~A~~r~~~t~e~v~~s~~i~~P---l~~~d~~~~~DGAaA~vl~s~~~A~~l~~~~~~  235 (399)
T PRK06059        181 NARYRKEVTVEDVLASPVVSDP---LRLLDICATSDGAAALIVASKSFARRHLGSVAG  235 (399)
T ss_pred             HhhcCCCCCHHHHhcCCcccCC---CchhhcCCCCCceEEEEEecHHHHHhhccccCC
Confidence            3444556777888888887763   466799999999999999999999888  5543

>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=97.91  E-value=2.3e-05  Score=82.23  Aligned_cols=75  Identities=29%  Similarity=0.339  Sum_probs=62.6

Q ss_pred             CCCCCcEEEEEcCHHHHHhcCCCceEEEEEEEeecCCCCc-----CCCChHHHHHHHHHHcCCCCCCccEEEecCCChhh
Q psy4157         360 GINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTL-----MGTGPIPAVNAVLAKAGWSKEEVGYFNRVATSGGI  434 (441)
Q Consensus       360 ~~sDGAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~~p~~-----~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~  434 (441)
                      .++|||+++||.+.+.|++.+.++++.|.+++...+....     ...+...+++++|+++|++++|||+++.|++.|..
T Consensus       242 v~GEGaaalVLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~AL~~agi~p~dId~i~~Hgtgt~~  321 (425)
T PRK06501        242 VMAEGAGALVLESLESAVARGAKILGIVAGCGEKADSFHRTRSSPDGSPAIGAIRAALADAGLTPEQIDYINAHGTSTPE  321 (425)
T ss_pred             eeeccEEEEEECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEEecCccCcc
Confidence            4799999999999999999999999999999866532211     11234689999999999999999999999999875

>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=97.86  E-value=3.4e-05  Score=80.40  Aligned_cols=76  Identities=25%  Similarity=0.323  Sum_probs=62.7

Q ss_pred             CCCCCCcEEEEEcCHHHHHhcCCCceEEEEEEEeecCCCCcC---CCChHHHHHHHHHHcCCCCCCccEEEecCCChhh
Q psy4157         359 SGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLM---GTGPIPAVNAVLAKAGWSKEEVGYFNRVATSGGI  434 (441)
Q Consensus       359 ~~~sDGAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~~p~~~---~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~  434 (441)
                      ..+++||+++||.+++.|++.|.+++++|.+++...+.....   ..+...+++++|+++|++++|||+++.|.+-|..
T Consensus       229 ~v~gEGa~~~vLe~~~~A~~rga~i~a~i~g~~~~~d~~~~~~p~~~~~~~ai~~AL~~Agi~p~dId~I~~Hgtgt~~  307 (405)
T PRK09116        229 LVIGEGAGTLVLEELEHAKARGATIYAEIVGFGTNSDGAHVTQPQAETMQIAMELALKDAGLAPEDIGYVNAHGTATDR  307 (405)
T ss_pred             EeeeccEEEEEEccHHHHHhCCCceEEEEEEEEEcCCCCcCCCCCHHHHHHHHHHHHHHhCCCHHHcCEEECcCccCCC
Confidence            347899999999999999999999999999999765422211   1234679999999999999999999999987743

>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]

Probab=97.84  E-value=3.8e-05  Score=79.96  Aligned_cols=73  Identities=36%  Similarity=0.489  Sum_probs=65.7

Q ss_pred             CCCCcEEEEEcCHHHHHhcCCCceEEEEEEEeecC-----CCCcCCCChHHHHHHHHHHcCCCCCCccEEEecCCChh
Q psy4157         361 INDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGV-----EPTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATSGG  433 (441)
Q Consensus       361 ~sDGAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~-----~p~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~  433 (441)
                      ++.||+++||.+.+.|++.|.+.+++|++++..++     .|...+.+...|+++||+++||+++|||++--|...|.
T Consensus       230 ~gEGag~lVLE~~ehA~aRGA~Iyaei~G~g~~~Da~h~t~P~p~g~Ga~~am~~AL~~Agl~~~~idYinaHgTsT~  307 (412)
T COG0304         230 IGEGAGALVLEELEHALARGAKIYAEIVGYGTTSDAYHITAPAPDGEGAIRAMRAALADAGLTPEDIDYINAHGTSTP  307 (412)
T ss_pred             EecceeEEEecChhhHHhCCCceEEEEEEEEecccccccCCCCCCCchHHHHHHHHHHHcCCCHhHCCEEeCCCccCC
Confidence            78899999999999999999999999999997764     45556778899999999999999999999999987764

>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II

Probab=97.79  E-value=3.3e-05  Score=83.23  Aligned_cols=75  Identities=32%  Similarity=0.392  Sum_probs=62.6

Q ss_pred             CCCCCcEEEEEcCHHHHHhcCCCceEEEEEEEeecCC-----CCcCCCChHHHHHHHHHHcCCCCCCccEEEecCCChhh
Q psy4157         360 GINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVE-----PTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATSGGI  434 (441)
Q Consensus       360 ~~sDGAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~~-----p~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~  434 (441)
                      .+++||+++||.+.+.|++.|.+++++|+|++...+-     |...+.+...+++++|+++||+++|||+++.|-.-|..
T Consensus       358 v~GEGAa~lVLE~~e~A~~rGa~IyA~I~G~g~s~Da~~~t~p~p~g~g~~~am~~AL~~AGl~p~dIdyInaHGTGT~~  437 (540)
T PLN02787        358 VMGEGAGVLLLEELEHAKKRGANIYAEFLGGSFTCDAYHMTEPHPEGAGVILCIEKALAQSGVSKEDVNYINAHATSTKA  437 (540)
T ss_pred             ccccceEEEEEeeHHHHHHCCCeeEEEEEEEEEecCCCCCCCCCcCHHHHHHHHHHHHHHcCCCHHHCcEEEccCccCCC
Confidence            4799999999999999999999999999999876532     22222345789999999999999999999999876643

>KOG1394|consensus

Probab=97.67  E-value=3.2e-05  Score=77.32  Aligned_cols=76  Identities=26%  Similarity=0.399  Sum_probs=68.4

Q ss_pred             CCCCCcEEEEEcCHHHHHhcCCCceEEEEEEEeecC-----CCCcCCCChHHHHHHHHHHcCCCCCCccEEEecCCChhh
Q psy4157         360 GINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGV-----EPTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATSGGI  434 (441)
Q Consensus       360 ~~sDGAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~-----~p~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~  434 (441)
                      .+.+|++.+||-+-|.|++.|.+.+++++||+..++     .|...+.+...|+.++|++|||+|+|||++--|-..|.+
T Consensus       254 VmGEGagvlvlEelEHA~~RgA~I~AE~lGygls~Da~HiT~P~~dG~Ga~~am~raL~~Agl~pe~i~YvNAHATST~~  333 (440)
T KOG1394|consen  254 VMGEGAGVLVLEELEHAKKRGAPIYAEVLGYGLSSDAYHITSPDPDGAGAVLAMERALKDAGLSPEDIDYVNAHATSTPL  333 (440)
T ss_pred             eeccceeEEehHhHHHHHHcCCceeHHhhcCcccccccccCCCCCCcchHHHHHHHHHHHcCCChhhcCeeecccccCcC
Confidence            488999999999999999999999999999998764     577778889999999999999999999999999888765


Q ss_pred             h
Q psy4157         435 A  435 (441)
Q Consensus       435 ~  435 (441)
                      +
T Consensus       334 G  334 (440)
T KOG1394|consen  334 G  334 (440)
T ss_pred             c
Confidence            4

>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria

Probab=97.55  E-value=0.00017  Score=75.11  Aligned_cols=75  Identities=21%  Similarity=0.178  Sum_probs=62.2

Q ss_pred             CCCCCCcEEEEEcCHHHHHhcCCCceEEEEEEEeecCCCCc--CCCChHHHHHHHHHHcCCCCCCccEEEecCCChh
Q psy4157         359 SGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTL--MGTGPIPAVNAVLAKAGWSKEEVGYFNRVATSGG  433 (441)
Q Consensus       359 ~~~sDGAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~~p~~--~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~  433 (441)
                      -.+++||++|||.+++.|++.|.+++++|.+++...+....  ...+...+++++|+++|++++|||+++.|-+-|.
T Consensus       225 ~~~gEGa~~lvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~~~~~~~~a~~~al~~ag~~~~~i~~v~~hgtgt~  301 (399)
T cd00832         225 YVPGEGGAILVLEDAAAARERGARVYGEIAGYAATFDPPPGSGRPPGLARAIRLALADAGLTPEDVDVVFADAAGVP  301 (399)
T ss_pred             EeeeceEEEEEEeeHHHHHHCCCeEEEEEEeEEEcCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHccEEEeccCcCC
Confidence            45899999999999999999999999999999976532211  2334578999999999999999999999976554

CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=97.51  E-value=0.00028  Score=87.69  Aligned_cols=74  Identities=16%  Similarity=0.235  Sum_probs=61.0

Q ss_pred             CCCCCcEEEEEcCHHHHHhcCCCceEEEEEEEeecCCC--CcCC---CChHHHHHHHHHHcCCCCCCccEEEecCCChh
Q psy4157         360 GINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEP--TLMG---TGPIPAVNAVLAKAGWSKEEVGYFNRVATSGG  433 (441)
Q Consensus       360 ~~sDGAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~~p--~~~~---~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~  433 (441)
                      .+++|+++|||-+.+.|++.|.+.++.|.|++...+-.  ..+.   .+...+++++|++||++++|||++|-|-.=|.
T Consensus       268 v~GEGag~vvLkrL~dA~~dGd~IyAvI~G~g~~~DG~~~~itaP~~~gq~~~i~~Al~~Agi~p~~I~yIeaHGTGT~  346 (2582)
T TIGR02813       268 MIGEGIGMMALKRLEDAERDGDRIYAVIKGVGASSDGKFKSIYAPRPEGQAKALKRAYDDAGFAPHTCGLIEAHGTGTA  346 (2582)
T ss_pred             cccceEEEEEeCcHHHHHhCCCcEEEEEEEEEEcCCCCCCCCcCCCHHHHHHHHHHHHHHcCCCHHHCCEEEecCCCCC
Confidence            48899999999999999999999999999999765422  2221   23368999999999999999999999976553

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PRK06158 thiolase; Provisional

Probab=97.50  E-value=0.0006  Score=70.63  Aligned_cols=86  Identities=17%  Similarity=0.261  Sum_probs=65.7

Q ss_pred             hHhhHHHHHHHhCCCHHHHhHHHHhcHHHHHHHHhCCCCCcceeeeEeccCCCceeeeccCCCCCCccHHHhhhcCcccc
Q psy4157          39 MGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTSVDALQKLRPVFQ  118 (441)
Q Consensus        39 mg~~ae~~a~~~~isRe~~D~~a~~s~~ra~~a~~~g~~~~ei~p~~~~~~~g~~~~~~de~~~~~~~~~~l~~l~p~f~  118 (441)
                      ++..+....++||+|||++.++++.+|+.|..=           |                                   
T Consensus       144 ~al~a~~ym~~yG~t~e~~a~vav~~~~~a~~N-----------P-----------------------------------  177 (384)
T PRK06158        144 YALAAARHMHQYGTTREQLAEVAVAARQWAQLN-----------P-----------------------------------  177 (384)
T ss_pred             HHHHHHHHHHHHCcCHHHHHHHHHHHHHHHhcC-----------c-----------------------------------
Confidence            677889999999999999999999999998710           1                                   


Q ss_pred             cCCceecCCCCCCCCccccchhhhhcccCceeeecccCCCCCCCHHHHhcCCCccCCCCcccCCCCCCccccchhhhhhh
Q psy4157         119 KDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMS  198 (441)
Q Consensus       119 ~~g~~t~~~~~~~~dg~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~p~~~~~g~vtagn~s~~~Dgaa~~ll~s  198 (441)
                                                         +.+.|.+.|+|.+..-|++..   -++-.+.|..+|||+++||++
T Consensus       178 -----------------------------------~A~~~~~~t~e~vl~s~~ia~---Pl~~~d~~~~~DGAaAvVL~s  219 (384)
T PRK06158        178 -----------------------------------EAFMRDPLTIDDVLAARMVSD---PLSVRDCCLVTDGAGAVVMVR  219 (384)
T ss_pred             -----------------------------------hhhhCCCCCHHHHhcCCccCC---CCchhhcCCccCCeEEEEEec
Confidence                                               011122455566666666644   377888899999999999999


Q ss_pred             HHHHHhccCc
Q psy4157         199 YKRAQARNIQ  208 (441)
Q Consensus       199 ~~~a~~~gl~  208 (441)
                      ++++++++..
T Consensus       220 ~e~A~~l~~~  229 (384)
T PRK06158        220 ADRARDLPRP  229 (384)
T ss_pred             HHHHhhcCCC
Confidence            9999887643

>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=97.43  E-value=0.0003  Score=73.25  Aligned_cols=70  Identities=24%  Similarity=0.206  Sum_probs=57.9

Q ss_pred             CCCCCcEEEEEcCHHHHHhcCCCceEEEEEEEeecCCCCcCCCChHHHHHHHHHHcCCCCCCccEEEecCCCh
Q psy4157         360 GINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATSG  432 (441)
Q Consensus       360 ~~sDGAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~~p~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft  432 (441)
                      .+++||+++||.+++.|++.|.+++++|.|++.-. ++. ...+...++++||++||+ ++|||++.-|-.-|
T Consensus       240 v~GEGAa~lvLE~~~~A~~Rga~i~AeI~G~~~d~-~~~-~~~~~~~am~~AL~~Agl-~~~IdyI~ahgtgT  309 (398)
T PRK06519        240 ILGSGGAFLVLESREHAEARGARPYARISGVESDR-ARR-APGDLEASLERLLKPAGG-LAAPTAVISGATGA  309 (398)
T ss_pred             eeeceEEEEEEeeHHHHHhCCCceEEEEEEEeecC-CCC-ChHHHHHHHHHHHHHCCC-cccCCEEEeCCCCC
Confidence            37899999999999999999999999999996422 222 223457899999999999 89999999886654

>PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=97.15  E-value=0.0013  Score=68.61  Aligned_cols=73  Identities=29%  Similarity=0.462  Sum_probs=59.5

Q ss_pred             CCCCCCcEEEEEcCHHHHHhcCCCceEEEEEEEeecCCCCcCC---CChHHHHHHHHHHcCCCCCCccEEEecCCChh
Q psy4157         359 SGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMG---TGPIPAVNAVLAKAGWSKEEVGYFNRVATSGG  433 (441)
Q Consensus       359 ~~~sDGAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~~p~~~~---~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~  433 (441)
                      -.++|||+++||.+.+.|++.|.+++++|.+++..++......   .+...+++++|+++|+  +|||++|.|-.-|.
T Consensus       228 ~v~gEGa~~lvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~p~~~~~~~a~~~al~~ag~--~~i~~v~~hgtgt~  303 (406)
T PRK08439        228 FVMGEGAGALVLEEYESAKKRGAKIYAEIIGFGESGDANHITSPAPEGPLRAMKAALEMAGN--PKIDYINAHGTSTP  303 (406)
T ss_pred             EEeeCceEEEEEccHHHHHHCCCeEEEEEEeEEccCCCCCCCCCCHHHHHHHHHHHHHHcCC--CccCEEEccCCcCC
Confidence            3489999999999999999999999999999987553222111   2446899999999999  89999999987664

>PRK06066 acetyl-CoA acetyltransferase; Provisional

Probab=97.12  E-value=0.0026  Score=65.94  Aligned_cols=31  Identities=29%  Similarity=0.284  Sum_probs=28.7

Q ss_pred             ccCCCCCCccccchhhhhhhHHHHHhccCcc
Q psy4157         179 VTAGNASGINDGAAAVLLMSYKRAQARNIQP  209 (441)
Q Consensus       179 vtagn~s~~~Dgaa~~ll~s~~~a~~~gl~~  209 (441)
                      +|..|.|+++|||+++||++++++++++..+
T Consensus       202 l~~~d~~~~~DGAaAvvl~s~~~a~~l~~~p  232 (385)
T PRK06066        202 LTELDIAPFVDGAIVVVLASEEVAKKLTDDP  232 (385)
T ss_pred             chhhccCCCCCceEEEEEeCHHHHHhcCCCC
Confidence            8999999999999999999999999887655

>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed

Probab=97.01  E-value=0.0009  Score=69.42  Aligned_cols=68  Identities=25%  Similarity=0.360  Sum_probs=51.6

Q ss_pred             CCCCCcEEEEEcCHHHHHhcCCCceEEEEEEEeecCCCC-----cCCCChHHHHHHHHHHcCCCCCCccEEEecCCChhh
Q psy4157         360 GINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPT-----LMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATSGGI  434 (441)
Q Consensus       360 ~~sDGAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~~p~-----~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~  434 (441)
                      .++|||++|||.+++       .+.++|.+++...+...     ....+...+++++|+++|++++|||++|.|...|..
T Consensus       220 ~~gEGaa~vVLe~~~-------~~~~~I~g~g~~~d~~~~~~~~~~~~~~~~a~~~Al~~Agl~~~dId~v~~hgtgt~~  292 (392)
T PRK09185        220 NIGEAAAFFLLERED-------DAAVALLGVGESSDAHHMSAPHPEGLGAILAMQQALADAGLAPADIGYINLHGTATPL  292 (392)
T ss_pred             ceeceEEEEEEEEcC-------CCcEEEEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHccEEEeCCCCCcC
Confidence            378899999999871       23368999887643221     112234679999999999999999999999998864

>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated

Probab=96.64  E-value=0.0028  Score=64.82  Aligned_cols=72  Identities=26%  Similarity=0.253  Sum_probs=54.0

Q ss_pred             CCCCCCcEEEEEcCHHHHHhcCCCceEEEEEEEeecCCC------CcCCCChHHHHHHHHHHcCCCCCCccEEEecCCCh
Q psy4157         359 SGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEP------TLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATSG  432 (441)
Q Consensus       359 ~~~sDGAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~~p------~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft  432 (441)
                      -.++|||+++||.+.+.|++.+.++++  .+++......      ...+.+...+++++|+++|++++|||++..|-.-+
T Consensus       187 ~v~GEGA~a~vLe~~~~A~~rga~i~a--~g~~~~~~~~~~~~~~p~~g~gl~~ai~~AL~~agl~~~dId~v~ah~~gt  264 (348)
T PRK06147        187 FIPGEAAAAVLLGRPAGGEAPGLPLLG--LGLGREPAPVGESEDLPLRGDGLTQAIRAALAEAGCGLEDMDYRIADLNGE  264 (348)
T ss_pred             eeeeceEEEEEEccHhhhhcCCCceEE--EEEeecCCCcccCCCCCCChHHHHHHHHHHHHHcCCCHHHCCEEEcCCCCC
Confidence            348999999999999999988877765  4444332211      01233457899999999999999999999887644

>PRK08313 acetyl-CoA acetyltransferase; Provisional

Probab=96.52  E-value=0.014  Score=60.52  Aligned_cols=47  Identities=21%  Similarity=0.289  Sum_probs=39.3

Q ss_pred             CCHHHHhcCCCccCCCCcccCCCCCCccccchhhhhhhHHHHHhccCcch
Q psy4157         161 TTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQARNIQPL  210 (441)
Q Consensus       161 ~~~~~~~~l~p~~~~~g~vtagn~s~~~Dgaa~~ll~s~~~a~~~gl~~~  210 (441)
                      .|+|.+.+.+|+..+   ++..|.|.++|||+++||+|++++++++..+.
T Consensus       185 ~t~e~v~~s~~ia~P---l~~~d~~~~~DGAaAvvl~s~e~a~~l~~~~~  231 (386)
T PRK08313        185 ITLEKVMASQMLWDP---IRFDETCPSSDGACAVVIGDEEAADAAAGRPV  231 (386)
T ss_pred             CCHHHHhcCCcccCC---CchhccCCCCCceEEEEEecHHHHHhcCCCCC
Confidence            566777777777664   89999999999999999999999998876554

>PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed

Probab=96.32  E-value=0.011  Score=61.85  Aligned_cols=72  Identities=24%  Similarity=0.320  Sum_probs=56.5

Q ss_pred             CCCCCCcEEEEEcCHHHHHhcCCCceEEEEEEEeecCCCCcC---CCChHHHHHHHHHHcCCCCCCccEEEecCCChh
Q psy4157         359 SGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLM---GTGPIPAVNAVLAKAGWSKEEVGYFNRVATSGG  433 (441)
Q Consensus       359 ~~~sDGAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~~p~~~---~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~  433 (441)
                      -.+++||+++||.+.+.|++.|.+++++|.|++...+-....   ..+...+++++|+.++  + |||+++.|-.-|.
T Consensus       228 ~v~gEGaa~lvLe~~~~A~~rga~i~a~i~G~g~~~d~~~~~~p~~~~~~~a~~~Al~~~~--~-~Idyi~aHgtGT~  302 (406)
T PRK07967        228 FVIAGGGGVVVVEELEHALARGAKIYAEIVGYGATSDGYDMVAPSGEGAVRCMQMALATVD--T-PIDYINTHGTSTP  302 (406)
T ss_pred             eeeeceEEEEEEeeHHHHHhCCCcEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHhCCC--C-CccEEEcCCCCCC
Confidence            348999999999999999999999999999999765322221   2234679999998654  5 9999999876553

>COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=96.06  E-value=0.026  Score=65.70  Aligned_cols=75  Identities=19%  Similarity=0.161  Sum_probs=59.4

Q ss_pred             CCCCCcEEEEEcCHHHHHhcCCCceEEEEEEEeecCCCCc--CC---CChHHHHHHHHHHcCCCCCCccEEEecCCChhh
Q psy4157         360 GINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTL--MG---TGPIPAVNAVLAKAGWSKEEVGYFNRVATSGGI  434 (441)
Q Consensus       360 ~~sDGAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~~p~~--~~---~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~  434 (441)
                      ..+.|+.+|||-.-+.|.+-|...++.|++.+...+-...  ..   .+-...++++|+++|+.|++|+++|-|=.=|.+
T Consensus       236 v~geG~g~vvLKrl~~A~~dgd~IyavI~gsavn~dG~~~gltaP~~~aQ~~v~~~al~~a~i~p~tv~yvEaHgTGT~l  315 (1061)
T COG3321         236 VRGEGAGVVVLKRLSDAERDGDRIYAVIRGSAVNQDGRSNGLTAPNLEAQADVIREALADAGIDPATVQYVEAHGTGTPL  315 (1061)
T ss_pred             EEeeeEEEEEEEEhHHHHhCCCeEEEEEEeeeeccCCCcCCCCCCCHHHHHHHHHHHHHhcCCCcccCcEEEecCCCCCC
Confidence            3667999999999999999999899999999866432221  11   233679999999999999999999999754433

>PRK07855 lipid-transfer protein; Provisional

Probab=95.18  E-value=0.1  Score=54.22  Aligned_cols=31  Identities=26%  Similarity=0.349  Sum_probs=26.6

Q ss_pred             ccCCCCCCccccchhhhhhhHHHHHhccCcc
Q psy4157         179 VTAGNASGINDGAAAVLLMSYKRAQARNIQP  209 (441)
Q Consensus       179 vtagn~s~~~Dgaa~~ll~s~~~a~~~gl~~  209 (441)
                      ++--+.|+.+|||+++||+|++++++++..+
T Consensus       207 l~~~d~~~~sDGAaAvvl~see~A~~l~~~p  237 (386)
T PRK07855        207 LRLLDCCQESDGAVALVVTSAERARDLKQRP  237 (386)
T ss_pred             chhhhcCCcCCceEEEEEecHHHHhhCCCCC
Confidence            5667889999999999999999999887543

>PRK06065 acetyl-CoA acetyltransferase; Provisional

Probab=94.80  E-value=0.067  Score=55.66  Aligned_cols=31  Identities=35%  Similarity=0.378  Sum_probs=26.8

Q ss_pred             ccCCCCCCccccchhhhhhhHHHHHhccCcc
Q psy4157         179 VTAGNASGINDGAAAVLLMSYKRAQARNIQP  209 (441)
Q Consensus       179 vtagn~s~~~Dgaa~~ll~s~~~a~~~gl~~  209 (441)
                      ++--+.|+++|||+++||+|++++++++..+
T Consensus       208 l~l~d~~~~~DGAaA~vl~s~e~A~~l~~~~  238 (392)
T PRK06065        208 VQLLDVSPVSDGAAAIVLASEDLARRYTDTP  238 (392)
T ss_pred             CchhhcCCCCCceEEEEEeCHHHHHhcCCCC
Confidence            5666788999999999999999999887654

>PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2

Probab=94.55  E-value=0.061  Score=46.12  Aligned_cols=51  Identities=22%  Similarity=0.251  Sum_probs=33.2

Q ss_pred             eEEEEEEEeecCC--CCcCC----CChHHHHHHHHHHcCCCCCCccEEEecCCChhh
Q psy4157         384 LARIVAMSSAGVE--PTLMG----TGPIPAVNAVLAKAGWSKEEVGYFNRVATSGGI  434 (441)
Q Consensus       384 ~a~I~~~~~~~~~--p~~~~----~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~  434 (441)
                      ++.|++++...+.  +....    .+...+++++|+++|++++|||++|.|-+=+..
T Consensus         1 ya~i~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agi~~~~I~~i~~hg~Gt~~   57 (119)
T PF02801_consen    1 YAVIRGYGVNSDGARSSSLTAPNGAALARAIRRALADAGISPEDIDYIEAHGTGTPL   57 (119)
T ss_dssp             SEEEEEEEEEE-SSSTSSSSSTTHHHHHHHHHHHHHHHTS-GGGEEEEE----SSHH
T ss_pred             CEEEEEEEEECCCCCCCCCcCcCHHHHHHHHHHHHhhhccccccceeeeeecccccc
Confidence            4678888877643  22221    234789999999999999999999999866553

3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A ....

>PRK07937 lipid-transfer protein; Provisional

Probab=93.64  E-value=0.16  Score=52.08  Aligned_cols=31  Identities=35%  Similarity=0.460  Sum_probs=27.3

Q ss_pred             ccCCCCCCccccchhhhhhhHHHHHhccCcc
Q psy4157         179 VTAGNASGINDGAAAVLLMSYKRAQARNIQP  209 (441)
Q Consensus       179 vtagn~s~~~Dgaa~~ll~s~~~a~~~gl~~  209 (441)
                      ++--+.|+++|||+++||+|++++++++..+
T Consensus       196 L~l~d~~~~~DGAaA~vl~s~~~A~~l~~~p  226 (352)
T PRK07937        196 LRRHDIAPITDGAAAVVLAAGDRARELRERP  226 (352)
T ss_pred             chhhcCCCCCCcceEEEEecHHHHHHcCCCc
Confidence            5777889999999999999999999987654

>PRK08142 acetyl-CoA acetyltransferase; Provisional

Probab=92.73  E-value=0.27  Score=51.09  Aligned_cols=29  Identities=14%  Similarity=0.209  Sum_probs=24.2

Q ss_pred             ccCCCCCCccccchhhhhhhHHHHHhccC
Q psy4157         179 VTAGNASGINDGAAAVLLMSYKRAQARNI  207 (441)
Q Consensus       179 vtagn~s~~~Dgaa~~ll~s~~~a~~~gl  207 (441)
                      ++--..|.++|||+++||+|++++++++-
T Consensus       202 l~l~d~~~~~DGAaA~vl~s~~~A~~l~~  230 (388)
T PRK08142        202 LHRLDCCVVTDGGGALVVVRPEIARSLKR  230 (388)
T ss_pred             chhhccCcccCceEEEEEecHHHHhhcCC
Confidence            45555688899999999999999998864

>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=88.39  E-value=0.44  Score=48.99  Aligned_cols=30  Identities=17%  Similarity=0.147  Sum_probs=25.7

Q ss_pred             HHHHHHHHHHcCCCCCCccEEEecCCChhh
Q psy4157         405 IPAVNAVLAKAGWSKEEVGYFNRVATSGGI  434 (441)
Q Consensus       405 ~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~  434 (441)
                      ..+++++|+++|++++|||+|-+|-.-.-+
T Consensus       274 ~~~i~~~L~~~gl~~~dId~~~~Hq~~~~~  303 (372)
T PRK07515        274 AEHIVEHLAENGLTPADVKRFWLHQANINM  303 (372)
T ss_pred             HHHHHHHHHHcCCCHHHCCEEEECCCCHHH
Confidence            468999999999999999999999655443

>PRK08257 acetyl-CoA acetyltransferase; Validated

Probab=87.78  E-value=2.9  Score=45.01  Aligned_cols=23  Identities=35%  Similarity=0.407  Sum_probs=20.6

Q ss_pred             CccccchhhhhhhHHHHHhccCc
Q psy4157         186 GINDGAAAVLLMSYKRAQARNIQ  208 (441)
Q Consensus       186 ~~~Dgaa~~ll~s~~~a~~~gl~  208 (441)
                      ..+|||+++||+|+++++++++.
T Consensus       241 ~~~DGaaAvil~S~e~A~~l~~~  263 (498)
T PRK08257        241 DMVDQGAAVLLTSVAKARRLGVP  263 (498)
T ss_pred             CCcccceEEEEeeHHHHHhcCCC
Confidence            48999999999999999998863

>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems

Probab=83.99  E-value=1.6  Score=43.35  Aligned_cols=31  Identities=19%  Similarity=0.348  Sum_probs=26.4

Q ss_pred             HHHHHHHHHHcCCCCCCccEEEecCCChhhh
Q psy4157         405 IPAVNAVLAKAGWSKEEVGYFNRVATSGGIA  435 (441)
Q Consensus       405 ~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~~  435 (441)
                      ..+++++|+++|++++|||.|-+|-....+-
T Consensus       226 ~~~i~~~l~~~g~~~~di~~~~~h~~~~~~~  256 (320)
T cd00830         226 PESIEEALEKAGLTPDDIDWFVPHQANLRII  256 (320)
T ss_pred             HHHHHHHHHHcCCCHHHCCEEEECCCCHHHH
Confidence            4688899999999999999999998765543

It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.

>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=80.88  E-value=1.6  Score=43.76  Aligned_cols=31  Identities=16%  Similarity=0.306  Sum_probs=26.5

Q ss_pred             HHHHHHHHHcCCCCCCccEEEecCCChhhhh
Q psy4157         406 PAVNAVLAKAGWSKEEVGYFNRVATSGGIAN  436 (441)
Q Consensus       406 ~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~~~  436 (441)
                      .+++++|+++|++++|||.|=.|-.-..+.-
T Consensus       234 ~~i~~~L~~~gl~~~did~~~~H~~~~~~~~  264 (329)
T PRK07204        234 KFIDKLLMDAGYTLADIDLIVPHQASGPAMR  264 (329)
T ss_pred             HHHHHHHHHcCCCHHHCCEEEeCCCCHHHHH
Confidence            6889999999999999999999987655543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	441
1wl4_A	397	Human Cytosolic Acetoacetyl-Coa Thiolase Complexed		2e-67
1dlu_A	389	Unliganded Biosynthetic Thiolase From Zoogloea Rami		2e-65
2wkv_A	392	Biosynthetic Thiolase From Z. Ramigera. Complex Of		2e-65
2wku_A	392	Biosynthetic Thiolase From Z. Ramigera. The N316h M		2e-65
1m1t_A	392	Biosynthetic Thiolase, Q64a Mutant Length = 392		2e-65
2wl5_C	392	Biosynthetic Thiolase From Z. Ramigera. Complex Of		2e-65
2wl6_A	392	Biosynthetic Thiolase From Z. Ramigera. The N316h-H		3e-65
2wkt_C	392	Biosynthetic Thiolase From Z. Ramigera. Complex Of		3e-65
2vu2_A	392	Biosynthetic Thiolase From Z. Ramigera. Complex Wit		3e-65
2wl4_A	392	Biosynthetic Thiolase From Z. Ramigera. Complex Of		3e-65
2wl4_C	392	Biosynthetic Thiolase From Z. Ramigera. Complex Of		3e-65
1qfl_A	389	Biosynthetic Thiolase From Zoogloea Ramigera In Com		3e-65
2wl5_A	392	Biosynthetic Thiolase From Z. Ramigera. Complex Of		4e-65
1m4s_A	392	Biosynthetic Thiolase, Cys89 Acetylated, Unliganded		4e-65
2wkt_A	392	Biosynthetic Thiolase From Z. Ramigera. Complex Of		4e-65
2wl4_B	392	Biosynthetic Thiolase From Z. Ramigera. Complex Of		4e-65
2wl4_D	392	Biosynthetic Thiolase From Z. Ramigera. Complex Of		4e-65
1m1o_A	392	Crystal Structure Of Biosynthetic Thiolase, C89a Mu		5e-65
4dd5_A	396	Biosynthetic Thiolase (Thla1) From Clostridium Diff		7e-61
4e1l_A	395	Crystal Structure Of Acetoacetyl-Coa Thiolase (Thla		1e-56
3ss6_A	394	Crystal Structure Of The Bacillus Anthracis Acetyl-		9e-53
2ibu_A	395	Crystallographic And Kinetic Studies Of Human Mitoc		5e-40
2ib7_A	395	Crystallographic And Kinetic Studies Of Human Mitoc		5e-40
2f2s_A	406	Human Mitochondrial Acetoacetyl-Coa Thiolase Length		6e-40
1ulq_A	401	Crystal Structure Of Tt0182 From Thermus Thermophil		1e-39
2iik_A	418	Crystal Structure Of Human Peroxisomal Acetyl-Coa A		4e-31
1afw_A	393	The 1.8 Angstrom Crystal Structure Of The Dimeric P		7e-29
1pxt_A	390	The 2.8 Angstroms Structure Of Peroxisomal 3-Ketoac		9e-29
2wua_A	440	Structure Of The Peroxisomal 3-Ketoacyl-Coa Thiolas		6e-28
2wu9_A	442	Crystal Structure Of Peroxisomal Kat2 From Arabidop		8e-28
2c7y_A	404	Plant Enzyme Length = 404		1e-27
3svk_A	407	Crystal Structure Of Acetyl-Coa Acetyltransferase F		8e-27
1wdk_C	390	Fatty Acid Beta-Oxidation Multienzyme Complex From		3e-26
3goa_A	387	Crystal Structure Of The Salmonella Typhimurium Fad		6e-26

>pdb|1WL4|A Chain A, Human Cytosolic Acetoacetyl-Coa Thiolase Complexed With Coa Length = 397

Iteration: 1
 Score =  253 bits (646), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 121/218 (55%), Positives = 159/218 (72%), Gaps = 2/218 (0%)
Query: 210 LARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHM 269
           LA  +I  GD++ +VAGG E MS+APH+  +R G+K+ +  + DS++ DGLTDAFHN HM
Sbjct: 101 LAVQSIGIGDSSIVVAGGMENMSKAPHLAYLRTGVKIGEMPLTDSILCDGLTDAFHNCHM 160
Query: 270 GITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDE 329
           GITAEN+AKKW +SR +QD+ A  SQ +T  AQ+ G+FD+EIVPV++STRKG + V  DE
Sbjct: 161 GITAENVAKKWQVSREDQDKVAVLSQNRTENAQKAGHFDKEIVPVLVSTRKGLIEVKTDE 220
Query: 330 YPKANTTVEALQKLRPVFQKD--GTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARI 387
           +P+  + +EA+ KL+P F  D  GTVT  NASGINDGAAAV+LM    A  R + PLARI
Sbjct: 221 FPRHGSNIEAMSKLKPYFLTDGTGTVTPANASGINDGAAAVVLMKKSEADKRGLTPLARI 280
Query: 388 VAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYF 425
           V+ S  GVEP++MG GPIPA+   + KAGWS E+V  F
Sbjct: 281 VSWSQVGVEPSIMGIGPIPAIKQAVTKAGWSLEDVDIF 318

>pdb|1DLU|A Chain A, Unliganded Biosynthetic Thiolase From Zoogloea Ramigera Length = 389

Iteration: 1
 Score =  246 bits (627), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 127/248 (51%), Positives = 162/248 (65%), Gaps = 10/248 (4%)
Query: 170 RPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQARNIQPLARIAIKSGDATAIVAGGQE 229
           R    K G      A G+N      L  S  RA A  +Q +A     +GDA+ IVAGG E
Sbjct: 65  RQAAMKAGVPQEATAWGMNQ-----LCGSGLRAVALGMQQIA-----TGDASIIVAGGME 114
Query: 230 CMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDE 289
            MS APH  ++R G+K+ D +M D+M+ DGLTDAF+  HMG TAEN+AK+W +SR EQD 
Sbjct: 115 SMSMAPHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDA 174
Query: 290 YAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQK 349
           +A  SQ K   AQ+ G F +EIVP ++  RKGD+ V  DEY +   T++++ KLRP F K
Sbjct: 175 FAVASQNKAEAAQKDGRFKDEIVPFIVKGRKGDITVDADEYIRHGATLDSMAKLRPAFDK 234
Query: 350 DGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVN 409
           +GTVTAGNASG+NDGAAA LLMS   A  R IQPL RIV+ ++ GV+P +MGTGPIPA  
Sbjct: 235 EGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDPKVMGTGPIPASR 294
Query: 410 AVLAKAGW 417
             L +AGW
Sbjct: 295 KALERAGW 302

>pdb|2WKV|A Chain A, Biosynthetic Thiolase From Z. Ramigera. Complex Of The N316d Mutant With Coenzyme A. Length = 392

Iteration: 1
 Score =  246 bits (627), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 127/248 (51%), Positives = 162/248 (65%), Gaps = 10/248 (4%)
Query: 170 RPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQARNIQPLARIAIKSGDATAIVAGGQE 229
           R    K G      A G+N      L  S  RA A  +Q +A     +GDA+ IVAGG E
Sbjct: 68  RQAAMKAGVPQEATAWGMNQ-----LCGSGLRAVALGMQQIA-----TGDASIIVAGGME 117
Query: 230 CMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDE 289
            MS APH  ++R G+K+ D +M D+M+ DGLTDAF+  HMG TAEN+AK+W +SR EQD 
Sbjct: 118 SMSMAPHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDA 177
Query: 290 YAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQK 349
           +A  SQ K   AQ+ G F +EIVP ++  RKGD+ V  DEY +   T++++ KLRP F K
Sbjct: 178 FAVASQNKAEAAQKDGRFKDEIVPFIVKGRKGDITVDADEYIRHGATLDSMAKLRPAFDK 237
Query: 350 DGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVN 409
           +GTVTAGNASG+NDGAAA LLMS   A  R IQPL RIV+ ++ GV+P +MGTGPIPA  
Sbjct: 238 EGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDPKVMGTGPIPASR 297
Query: 410 AVLAKAGW 417
             L +AGW
Sbjct: 298 KALERAGW 305

>pdb|2WKU|A Chain A, Biosynthetic Thiolase From Z. Ramigera. The N316h Mutant. Length = 392

Iteration: 1
 Score =  246 bits (627), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 127/248 (51%), Positives = 162/248 (65%), Gaps = 10/248 (4%)
Query: 170 RPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQARNIQPLARIAIKSGDATAIVAGGQE 229
           R    K G      A G+N      L  S  RA A  +Q +A     +GDA+ IVAGG E
Sbjct: 68  RQAAMKAGVPQEATAWGMNQ-----LCGSGLRAVALGMQQIA-----TGDASIIVAGGME 117
Query: 230 CMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDE 289
            MS APH  ++R G+K+ D +M D+M+ DGLTDAF+  HMG TAEN+AK+W +SR EQD 
Sbjct: 118 SMSMAPHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDA 177
Query: 290 YAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQK 349
           +A  SQ K   AQ+ G F +EIVP ++  RKGD+ V  DEY +   T++++ KLRP F K
Sbjct: 178 FAVASQNKAEAAQKDGRFKDEIVPFIVKGRKGDITVDADEYIRHGATLDSMAKLRPAFDK 237
Query: 350 DGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVN 409
           +GTVTAGNASG+NDGAAA LLMS   A  R IQPL RIV+ ++ GV+P +MGTGPIPA  
Sbjct: 238 EGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDPKVMGTGPIPASR 297
Query: 410 AVLAKAGW 417
             L +AGW
Sbjct: 298 KALERAGW 305

>pdb|1M1T|A Chain A, Biosynthetic Thiolase, Q64a Mutant Length = 392

Iteration: 1
 Score =  246 bits (627), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 128/254 (50%), Positives = 163/254 (64%), Gaps = 10/254 (3%)
Query: 164 EALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQARNIQPLARIAIKSGDATAI 223
           E     R    K G      A G+N      L  S  RA A  +Q +A     +GDA+ I
Sbjct: 62  EGANPARQAAMKAGVPQEATAWGMNQ-----LCGSGLRAVALGMQQIA-----TGDASII 111
Query: 224 VAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSIS 283
           VAGG E MS APH  ++R G+K+ D +M D+M+ DGLTDAF+  HMG TAEN+AK+W +S
Sbjct: 112 VAGGMESMSMAPHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLS 171
Query: 284 RLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKL 343
           R EQD +A  SQ K   AQ+ G F +EIVP ++  RKGD+ V  DEY +   T++++ KL
Sbjct: 172 RDEQDAFAVASQNKAEAAQKDGRFKDEIVPFIVKGRKGDITVDADEYIRHGATLDSMAKL 231
Query: 344 RPVFQKDGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTG 403
           RP F K+GTVTAGNASG+NDGAAA LLMS   A  R IQPL RIV+ ++ GV+P +MGTG
Sbjct: 232 RPAFDKEGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDPKVMGTG 291
Query: 404 PIPAVNAVLAKAGW 417
           PIPA    L +AGW
Sbjct: 292 PIPASRKALERAGW 305

>pdb|2WL5|C Chain C, Biosynthetic Thiolase From Z. Ramigera. Complex Of The H348n Mutant With Coenzyme A. Length = 392

Iteration: 1
 Score =  246 bits (627), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 127/248 (51%), Positives = 162/248 (65%), Gaps = 10/248 (4%)
Query: 170 RPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQARNIQPLARIAIKSGDATAIVAGGQE 229
           R    K G      A G+N      L  S  RA A  +Q +A     +GDA+ IVAGG E
Sbjct: 68  RQAAMKAGVPQEATAWGMNQ-----LCGSGLRAVALGMQQIA-----TGDASIIVAGGME 117
Query: 230 CMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDE 289
            MS APH  ++R G+K+ D +M D+M+ DGLTDAF+  HMG TAEN+AK+W +SR EQD 
Sbjct: 118 SMSMAPHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDA 177
Query: 290 YAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQK 349
           +A  SQ K   AQ+ G F +EIVP ++  RKGD+ V  DEY +   T++++ KLRP F K
Sbjct: 178 FAVASQNKAEAAQKDGRFKDEIVPFIVKGRKGDITVDADEYIRHGATLDSMAKLRPAFDK 237
Query: 350 DGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVN 409
           +GTVTAGNASG+NDGAAA LLMS   A  R IQPL RIV+ ++ GV+P +MGTGPIPA  
Sbjct: 238 EGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDPKVMGTGPIPASR 297
Query: 410 AVLAKAGW 417
             L +AGW
Sbjct: 298 KALERAGW 305

>pdb|2WL6|A Chain A, Biosynthetic Thiolase From Z. Ramigera. The N316h-H348n Mutant. Length = 392

Iteration: 1
 Score =  246 bits (627), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 127/248 (51%), Positives = 162/248 (65%), Gaps = 10/248 (4%)
Query: 170 RPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQARNIQPLARIAIKSGDATAIVAGGQE 229
           R    K G      A G+N      L  S  RA A  +Q +A     +GDA+ IVAGG E
Sbjct: 68  RQAAMKAGVPQEATAWGMNQ-----LCGSGLRAVALGMQQIA-----TGDASIIVAGGME 117
Query: 230 CMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDE 289
            MS APH  ++R G+K+ D +M D+M+ DGLTDAF+  HMG TAEN+AK+W +SR EQD 
Sbjct: 118 SMSMAPHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDA 177
Query: 290 YAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQK 349
           +A  SQ K   AQ+ G F +EIVP ++  RKGD+ V  DEY +   T++++ KLRP F K
Sbjct: 178 FAVASQNKAEAAQKDGRFKDEIVPFIVKGRKGDITVDADEYIRHGATLDSMAKLRPAFDK 237
Query: 350 DGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVN 409
           +GTVTAGNASG+NDGAAA LLMS   A  R IQPL RIV+ ++ GV+P +MGTGPIPA  
Sbjct: 238 EGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDPKVMGTGPIPASR 297
Query: 410 AVLAKAGW 417
             L +AGW
Sbjct: 298 KALERAGW 305

>pdb|2WKT|C Chain C, Biosynthetic Thiolase From Z. Ramigera. Complex Of The N316a Mutant With Coenzyme A Length = 392

Iteration: 1
 Score =  246 bits (627), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 127/248 (51%), Positives = 162/248 (65%), Gaps = 10/248 (4%)
Query: 170 RPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQARNIQPLARIAIKSGDATAIVAGGQE 229
           R    K G      A G+N      L  S  RA A  +Q +A     +GDA+ IVAGG E
Sbjct: 68  RQAAMKAGVPQEATAWGMNQ-----LCGSGLRAVALGMQQIA-----TGDASIIVAGGME 117
Query: 230 CMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDE 289
            MS APH  ++R G+K+ D +M D+M+ DGLTDAF+  HMG TAEN+AK+W +SR EQD 
Sbjct: 118 SMSMAPHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDA 177
Query: 290 YAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQK 349
           +A  SQ K   AQ+ G F +EIVP ++  RKGD+ V  DEY +   T++++ KLRP F K
Sbjct: 178 FAVASQNKAEAAQKDGRFKDEIVPFIVKGRKGDITVDADEYIRHGATLDSMAKLRPAFDK 237
Query: 350 DGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVN 409
           +GTVTAGNASG+NDGAAA LLMS   A  R IQPL RIV+ ++ GV+P +MGTGPIPA  
Sbjct: 238 EGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDPKVMGTGPIPASR 297
Query: 410 AVLAKAGW 417
             L +AGW
Sbjct: 298 KALERAGW 305

>pdb|2VU2|A Chain A, Biosynthetic Thiolase From Z. Ramigera. Complex With S- Pantetheine-11-pivalate. Length = 392

Iteration: 1
 Score =  246 bits (627), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 127/248 (51%), Positives = 162/248 (65%), Gaps = 10/248 (4%)
Query: 170 RPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQARNIQPLARIAIKSGDATAIVAGGQE 229
           R    K G      A G+N      L  S  RA A  +Q +A     +GDA+ IVAGG E
Sbjct: 68  RQAAMKAGVPQEATAWGMNQ-----LCGSGLRAVALGMQQIA-----TGDASIIVAGGME 117
Query: 230 CMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDE 289
            MS APH  ++R G+K+ D +M D+M+ DGLTDAF+  HMG TAEN+AK+W +SR EQD 
Sbjct: 118 SMSMAPHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDA 177
Query: 290 YAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQK 349
           +A  SQ K   AQ+ G F +EIVP ++  RKGD+ V  DEY +   T++++ KLRP F K
Sbjct: 178 FAVASQNKAEAAQKDGRFKDEIVPFIVKGRKGDITVDADEYIRHGATLDSMAKLRPAFDK 237
Query: 350 DGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVN 409
           +GTVTAGNASG+NDGAAA LLMS   A  R IQPL RIV+ ++ GV+P +MGTGPIPA  
Sbjct: 238 EGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDPKVMGTGPIPASR 297
Query: 410 AVLAKAGW 417
             L +AGW
Sbjct: 298 KALERAGW 305

>pdb|2WL4|A Chain A, Biosynthetic Thiolase From Z. Ramigera. Complex Of The H348a Mutant With Coenzyme A Length = 392

Iteration: 1
 Score =  245 bits (626), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 127/248 (51%), Positives = 162/248 (65%), Gaps = 10/248 (4%)
Query: 170 RPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQARNIQPLARIAIKSGDATAIVAGGQE 229
           R    K G      A G+N      L  S  RA A  +Q +A     +GDA+ IVAGG E
Sbjct: 68  RQAAMKAGVPQEATAWGMNQ-----LCGSGLRAVALGMQQIA-----TGDASIIVAGGME 117
Query: 230 CMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDE 289
            MS APH  ++R G+K+ D +M D+M+ DGLTDAF+  HMG TAEN+AK+W +SR EQD 
Sbjct: 118 SMSMAPHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDA 177
Query: 290 YAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQK 349
           +A  SQ K   AQ+ G F +EIVP ++  RKGD+ V  DEY +   T++++ KLRP F K
Sbjct: 178 FAVASQNKAEAAQKDGRFKDEIVPFIVKGRKGDITVDADEYIRHGATLDSMAKLRPAFDK 237
Query: 350 DGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVN 409
           +GTVTAGNASG+NDGAAA LLMS   A  R IQPL RIV+ ++ GV+P +MGTGPIPA  
Sbjct: 238 EGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDPKVMGTGPIPASR 297
Query: 410 AVLAKAGW 417
             L +AGW
Sbjct: 298 KALERAGW 305

>pdb|2WL4|C Chain C, Biosynthetic Thiolase From Z. Ramigera. Complex Of The H348a Mutant With Coenzyme A Length = 392

Iteration: 1
 Score =  245 bits (626), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 127/248 (51%), Positives = 162/248 (65%), Gaps = 10/248 (4%)
Query: 170 RPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQARNIQPLARIAIKSGDATAIVAGGQE 229
           R    K G      A G+N      L  S  RA A  +Q +A     +GDA+ IVAGG E
Sbjct: 68  RQAAMKAGVPQEATAWGMNQ-----LCGSGLRAVALGMQQIA-----TGDASIIVAGGME 117
Query: 230 CMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDE 289
            MS APH  ++R G+K+ D +M D+M+ DGLTDAF+  HMG TAEN+AK+W +SR EQD 
Sbjct: 118 SMSMAPHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDA 177
Query: 290 YAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQK 349
           +A  SQ K   AQ+ G F +EIVP ++  RKGD+ V  DEY +   T++++ KLRP F K
Sbjct: 178 FAVASQNKAEAAQKDGRFKDEIVPFIVKGRKGDITVDADEYIRHGATLDSMAKLRPAFDK 237
Query: 350 DGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVN 409
           +GTVTAGNASG+NDGAAA LLMS   A  R IQPL RIV+ ++ GV+P +MGTGPIPA  
Sbjct: 238 EGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDPKVMGTGPIPASR 297
Query: 410 AVLAKAGW 417
             L +AGW
Sbjct: 298 KALERAGW 305

>pdb|1QFL|A Chain A, Biosynthetic Thiolase From Zoogloea Ramigera In Complex With A Reaction Intermediate. Length = 389

Iteration: 1
 Score =  245 bits (626), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 127/248 (51%), Positives = 162/248 (65%), Gaps = 10/248 (4%)
Query: 170 RPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQARNIQPLARIAIKSGDATAIVAGGQE 229
           R    K G      A G+N      L  S  RA A  +Q +A     +GDA+ IVAGG E
Sbjct: 65  RQAAMKAGVPQEATAWGMNQ-----LXGSGLRAVALGMQQIA-----TGDASIIVAGGME 114
Query: 230 CMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDE 289
            MS APH  ++R G+K+ D +M D+M+ DGLTDAF+  HMG TAEN+AK+W +SR EQD 
Sbjct: 115 SMSMAPHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDA 174
Query: 290 YAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQK 349
           +A  SQ K   AQ+ G F +EIVP ++  RKGD+ V  DEY +   T++++ KLRP F K
Sbjct: 175 FAVASQNKAEAAQKDGRFKDEIVPFIVKGRKGDITVDADEYIRHGATLDSMAKLRPAFDK 234
Query: 350 DGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVN 409
           +GTVTAGNASG+NDGAAA LLMS   A  R IQPL RIV+ ++ GV+P +MGTGPIPA  
Sbjct: 235 EGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDPKVMGTGPIPASR 294
Query: 410 AVLAKAGW 417
             L +AGW
Sbjct: 295 KALERAGW 302

>pdb|2WL5|A Chain A, Biosynthetic Thiolase From Z. Ramigera. Complex Of The H348n Mutant With Coenzyme A. Length = 392

Iteration: 1
 Score =  245 bits (625), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 127/248 (51%), Positives = 162/248 (65%), Gaps = 10/248 (4%)
Query: 170 RPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQARNIQPLARIAIKSGDATAIVAGGQE 229
           R    K G      A G+N      L  S  RA A  +Q +A     +GDA+ IVAGG E
Sbjct: 68  RQAAMKAGVPQEATAWGMNQ-----LXGSGLRAVALGMQQIA-----TGDASIIVAGGME 117
Query: 230 CMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDE 289
            MS APH  ++R G+K+ D +M D+M+ DGLTDAF+  HMG TAEN+AK+W +SR EQD 
Sbjct: 118 SMSMAPHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDA 177
Query: 290 YAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQK 349
           +A  SQ K   AQ+ G F +EIVP ++  RKGD+ V  DEY +   T++++ KLRP F K
Sbjct: 178 FAVASQNKAEAAQKDGRFKDEIVPFIVKGRKGDITVDADEYIRHGATLDSMAKLRPAFDK 237
Query: 350 DGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVN 409
           +GTVTAGNASG+NDGAAA LLMS   A  R IQPL RIV+ ++ GV+P +MGTGPIPA  
Sbjct: 238 EGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDPKVMGTGPIPASR 297
Query: 410 AVLAKAGW 417
             L +AGW
Sbjct: 298 KALERAGW 305

>pdb|1M4S|A Chain A, Biosynthetic Thiolase, Cys89 Acetylated, Unliganded Form Length = 392

Iteration: 1
 Score =  245 bits (625), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 127/248 (51%), Positives = 162/248 (65%), Gaps = 10/248 (4%)
Query: 170 RPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQARNIQPLARIAIKSGDATAIVAGGQE 229
           R    K G      A G+N      L  S  RA A  +Q +A     +GDA+ IVAGG E
Sbjct: 68  RQAAMKAGVPQEATAWGMNQ-----LXGSGLRAVALGMQQIA-----TGDASIIVAGGME 117
Query: 230 CMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDE 289
            MS APH  ++R G+K+ D +M D+M+ DGLTDAF+  HMG TAEN+AK+W +SR EQD 
Sbjct: 118 SMSMAPHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDA 177
Query: 290 YAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQK 349
           +A  SQ K   AQ+ G F +EIVP ++  RKGD+ V  DEY +   T++++ KLRP F K
Sbjct: 178 FAVASQNKAEAAQKDGRFKDEIVPFIVKGRKGDITVDADEYIRHGATLDSMAKLRPAFDK 237
Query: 350 DGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVN 409
           +GTVTAGNASG+NDGAAA LLMS   A  R IQPL RIV+ ++ GV+P +MGTGPIPA  
Sbjct: 238 EGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDPKVMGTGPIPASR 297
Query: 410 AVLAKAGW 417
             L +AGW
Sbjct: 298 KALERAGW 305

>pdb|2WKT|A Chain A, Biosynthetic Thiolase From Z. Ramigera. Complex Of The N316a Mutant With Coenzyme A. Length = 392

Iteration: 1
 Score =  245 bits (625), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 127/248 (51%), Positives = 162/248 (65%), Gaps = 10/248 (4%)
Query: 170 RPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQARNIQPLARIAIKSGDATAIVAGGQE 229
           R    K G      A G+N      L  S  RA A  +Q +A     +GDA+ IVAGG E
Sbjct: 68  RQAAMKAGVPQEATAWGMNQ-----LXGSGLRAVALGMQQIA-----TGDASIIVAGGME 117
Query: 230 CMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDE 289
            MS APH  ++R G+K+ D +M D+M+ DGLTDAF+  HMG TAEN+AK+W +SR EQD 
Sbjct: 118 SMSMAPHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDA 177
Query: 290 YAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQK 349
           +A  SQ K   AQ+ G F +EIVP ++  RKGD+ V  DEY +   T++++ KLRP F K
Sbjct: 178 FAVASQNKAEAAQKDGRFKDEIVPFIVKGRKGDITVDADEYIRHGATLDSMAKLRPAFDK 237
Query: 350 DGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVN 409
           +GTVTAGNASG+NDGAAA LLMS   A  R IQPL RIV+ ++ GV+P +MGTGPIPA  
Sbjct: 238 EGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDPKVMGTGPIPASR 297
Query: 410 AVLAKAGW 417
             L +AGW
Sbjct: 298 KALERAGW 305

>pdb|2WL4|B Chain B, Biosynthetic Thiolase From Z. Ramigera. Complex Of The H348a Mutant With Coenzyme A Length = 392

Iteration: 1
 Score =  245 bits (625), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 127/248 (51%), Positives = 162/248 (65%), Gaps = 10/248 (4%)
Query: 170 RPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQARNIQPLARIAIKSGDATAIVAGGQE 229
           R    K G      A G+N      L  S  RA A  +Q +A     +GDA+ IVAGG E
Sbjct: 68  RQAAMKAGVPQEATAWGMNQ-----LXGSGLRAVALGMQQIA-----TGDASIIVAGGME 117
Query: 230 CMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDE 289
            MS APH  ++R G+K+ D +M D+M+ DGLTDAF+  HMG TAEN+AK+W +SR EQD 
Sbjct: 118 SMSMAPHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDA 177
Query: 290 YAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQK 349
           +A  SQ K   AQ+ G F +EIVP ++  RKGD+ V  DEY +   T++++ KLRP F K
Sbjct: 178 FAVASQNKAEAAQKDGRFKDEIVPFIVKGRKGDITVDADEYIRHGATLDSMAKLRPAFDK 237
Query: 350 DGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVN 409
           +GTVTAGNASG+NDGAAA LLMS   A  R IQPL RIV+ ++ GV+P +MGTGPIPA  
Sbjct: 238 EGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDPKVMGTGPIPASR 297
Query: 410 AVLAKAGW 417
             L +AGW
Sbjct: 298 KALERAGW 305

>pdb|2WL4|D Chain D, Biosynthetic Thiolase From Z. Ramigera. Complex Of The H348a Mutant With Coenzyme A Length = 392

Iteration: 1
 Score =  245 bits (625), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 127/248 (51%), Positives = 162/248 (65%), Gaps = 10/248 (4%)
Query: 170 RPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQARNIQPLARIAIKSGDATAIVAGGQE 229
           R    K G      A G+N      L  S  RA A  +Q +A     +GDA+ IVAGG E
Sbjct: 68  RQAAMKAGVPQEATAWGMNQ-----LXGSGLRAVALGMQQIA-----TGDASIIVAGGME 117
Query: 230 CMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDE 289
            MS APH  ++R G+K+ D +M D+M+ DGLTDAF+  HMG TAEN+AK+W +SR EQD 
Sbjct: 118 SMSMAPHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDA 177
Query: 290 YAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQK 349
           +A  SQ K   AQ+ G F +EIVP ++  RKGD+ V  DEY +   T++++ KLRP F K
Sbjct: 178 FAVASQNKAEAAQKDGRFKDEIVPFIVKGRKGDITVDADEYIRHGATLDSMAKLRPAFDK 237
Query: 350 DGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVN 409
           +GTVTAGNASG+NDGAAA LLMS   A  R IQPL RIV+ ++ GV+P +MGTGPIPA  
Sbjct: 238 EGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDPKVMGTGPIPASR 297
Query: 410 AVLAKAGW 417
             L +AGW
Sbjct: 298 KALERAGW 305

>pdb|1M1O|A Chain A, Crystal Structure Of Biosynthetic Thiolase, C89a Mutant, Complexed With Acetoacetyl-Coa Length = 392

Iteration: 1
 Score =  244 bits (624), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 115/203 (56%), Positives = 147/203 (72%)
Query: 215 IKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAE 274
           I +GDA+ IVAGG E MS APH  ++R G+K+ D +M D+M+ DGLTDAF+  HMG TAE
Sbjct: 103 IATGDASIIVAGGMESMSMAPHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAE 162
Query: 275 NIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKAN 334
           N+AK+W +SR EQD +A  SQ K   AQ+ G F +EIVP ++  RKGD+ V  DEY +  
Sbjct: 163 NVAKQWQLSRDEQDAFAVASQNKAEAAQKDGRFKDEIVPFIVKGRKGDITVDADEYIRHG 222
Query: 335 TTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAG 394
            T++++ KLRP F K+GTVTAGNASG+NDGAAA LLMS   A  R IQPL RIV+ ++ G
Sbjct: 223 ATLDSMAKLRPAFDKEGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVG 282
Query: 395 VEPTLMGTGPIPAVNAVLAKAGW 417
           V+P +MGTGPIPA    L +AGW
Sbjct: 283 VDPKVMGTGPIPASRKALERAGW 305

>pdb|4DD5|A Chain A, Biosynthetic Thiolase (Thla1) From Clostridium Difficile Length = 396

Iteration: 1
 Score =  231 bits (588), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 117/209 (55%), Positives = 150/209 (71%), Gaps = 1/209 (0%)
Query: 215 IKSGDATAIVAGGQECMSQAPHVI-NIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITA 273
           I  GDA  ++ GG E MS +P+++ + R G ++ DA   DSM+ DGL+D F+N HMGITA
Sbjct: 107 IALGDADIMLVGGAENMSMSPYLVPSARYGARMGDAAFVDSMIKDGLSDIFNNYHMGITA 166
Query: 274 ENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKA 333
           ENIA++W+I+R EQDE A  SQ K  KAQ  G FDEEIVPVVI  RKGD VV KDEY K 
Sbjct: 167 ENIAEQWNITREEQDELALASQNKAEKAQAEGKFDEEIVPVVIKGRKGDTVVDKDEYIKP 226
Query: 334 NTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSA 393
            TT+E L KLRP F+KDGTVTAGNASGINDGAA +++M+ + A+   I+PLA IV+  +A
Sbjct: 227 GTTMEKLAKLRPAFKKDGTVTAGNASGINDGAAMLVVMAKEKAEELGIEPLATIVSYGTA 286
Query: 394 GVEPTLMGTGPIPAVNAVLAKAGWSKEEV 422
           GV+P +MG GP+PA    L  A  + E++
Sbjct: 287 GVDPKIMGYGPVPATKKALEAANMTIEDI 315

>pdb|4E1L|A Chain A, Crystal Structure Of Acetoacetyl-Coa Thiolase (Thla2) From Clostridium Difficile Length = 395

Iteration: 1
 Score =  217 bits (552), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 114/215 (53%), Positives = 146/215 (67%), Gaps = 2/215 (0%)
Query: 210 LARIAIKSGDATAIVAGGQECMSQAPHVI-NIRNGIKLNDAEMKDSMVFDGLTDAFHNIH 268
           LA  +I SG+   ++AGG E MSQAP+++   R G K+ +  M DSM+ DGL DAF+  H
Sbjct: 100 LAAQSITSGENDVVIAGGTENMSQAPYIVPTARFGSKMGNITMVDSMLTDGLIDAFNQYH 159
Query: 269 MGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDV-VVAK 327
           MGITAENIA K+  +R  QD+ A +SQ K   A +   F EEIVPV +  R+G +  + K
Sbjct: 160 MGITAENIATKFEFTREMQDKLALESQNKAENAIKNNRFKEEIVPVDVLIRRGKIETIDK 219
Query: 328 DEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARI 387
           DEYPK   T E L KL+P F+KDGTVTAGNASGINDGAA ++LMS + A    I+PLA+I
Sbjct: 220 DEYPKLGMTFEGLSKLKPAFKKDGTVTAGNASGINDGAAMLILMSQQKADELGIRPLAKI 279
Query: 388 VAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEV 422
            + +SAGVEP +MGTGPIPA    L KAG S  ++
Sbjct: 280 KSYASAGVEPEVMGTGPIPATRKALKKAGLSINDI 314

>pdb|3SS6|A Chain A, Crystal Structure Of The Bacillus Anthracis Acetyl-Coa Acetyltransferase Length = 394

Iteration: 1
 Score =  204 bits (519), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 110/245 (44%), Positives = 160/245 (65%), Gaps = 7/245 (2%)
Query: 180 TAGNASGINDGAAAVLLMSYKRAQARNIQPL--ARIAIKSGDATAIVAGGQECMSQAPHV 237
           TA  A+G  D    V   + +R  +  +Q +  A + I+ G +  +VAGG E MS +P+ 
Sbjct: 71  TAALAAGFPD---TVTGYTIQRQXSSGMQAIMSAAMQIQLGVSEVVVAGGVEAMSSSPYA 127
Query: 238 I-NIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEYAYQSQV 296
           +   R G +L   E++D+ V++ L D  H+I MG TAEN+ +++ I+R EQDE A +S  
Sbjct: 128 LKQHRWGQRLQHGEIRDT-VWEVLEDPIHHIMMGETAENLVEQYEITREEQDEVALRSHT 186
Query: 297 KTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAG 356
              KA E GYFD++IVP+ I  R+ +VV +KDE+P+A+ T E L  L+P F+KDG+VTAG
Sbjct: 187 LALKAIESGYFDDQIVPITIKERRKEVVFSKDEHPRADITAEKLAGLKPAFRKDGSVTAG 246
Query: 357 NASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAG 416
           NASG+NDG+A ++LMS + A+ + +QPLARIV  S AGV+P +MG GP PA+   L K  
Sbjct: 247 NASGLNDGSAVLVLMSEEKAKEKGLQPLARIVGYSVAGVDPKIMGIGPAPAIRKGLEKVD 306
Query: 417 WSKEE 421
           WS E+
Sbjct: 307 WSLED 311

>pdb|2IBU|A Chain A, Crystallographic And Kinetic Studies Of Human Mitochondrial Acetoacetyl-coa Thiolase (t2): The Importance Of Potassium And Chloride For Its Structure And Function Length = 395

Iteration: 1
 Score =  161 bits (408), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 94/218 (43%), Positives = 132/218 (60%), Gaps = 4/218 (1%)
Query: 210 LARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHM 269
           +A  ++  G    +VAGG E MS  P+V+N R        +++D +V DGLTD ++ IHM
Sbjct: 103 MASQSLMCGHQDVMVAGGMESMSNVPYVMN-RGSTPYGGVKLEDLIVKDGLTDVYNKIHM 161
Query: 270 GITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTR-KGDVVVAKD 328
           G  AEN AKK +I+R EQD YA  S  ++  A E G F  E++PV ++ + + DVVV +D
Sbjct: 162 GSCAENTAKKLNIARNEQDAYAINSYTRSKAAWEAGKFGNEVIPVTVTVKGQPDVVVKED 221
Query: 329 EYPKANTTVEALQKLRPVFQKD-GTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARI 387
           E  K       + KL+ VFQK+ GTVTA NAS +NDGAAA++LM+   A+  N+ PLARI
Sbjct: 222 EEYK-RVDFSKVPKLKTVFQKENGTVTAANASTLNDGAAALVLMTADAAKRLNVTPLARI 280
Query: 388 VAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYF 425
           VA + A VEP      P+ A + VL   G  KE++  +
Sbjct: 281 VAFADAAVEPIDFPIAPVYAASMVLKDVGLKKEDIAMW 318

>pdb|2IB7|A Chain A, Crystallographic And Kinetic Studies Of Human Mitochondrial Acetoacetyl-Coa Thiolase (T2): The Importance Of Potassium And Chloride For Its Structure And Function Length = 395

Iteration: 1
 Score =  161 bits (408), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 94/218 (43%), Positives = 132/218 (60%), Gaps = 4/218 (1%)
Query: 210 LARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHM 269
           +A  ++  G    +VAGG E MS  P+V+N R        +++D +V DGLTD ++ IHM
Sbjct: 103 MASQSLMCGHQDVMVAGGMESMSNVPYVMN-RGSTPYGGVKLEDLIVKDGLTDVYNKIHM 161
Query: 270 GITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTR-KGDVVVAKD 328
           G  AEN AKK +I+R EQD YA  S  ++  A E G F  E++PV ++ + + DVVV +D
Sbjct: 162 GSCAENTAKKLNIARNEQDAYAINSYTRSKAAWEAGKFGNEVIPVTVTVKGQPDVVVKED 221
Query: 329 EYPKANTTVEALQKLRPVFQKD-GTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARI 387
           E  K       + KL+ VFQK+ GTVTA NAS +NDGAAA++LM+   A+  N+ PLARI
Sbjct: 222 EEYK-RVDFSKVPKLKTVFQKENGTVTAANASTLNDGAAALVLMTADAAKRLNVTPLARI 280
Query: 388 VAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYF 425
           VA + A VEP      P+ A + VL   G  KE++  +
Sbjct: 281 VAFADAAVEPIDFPIAPVYAASMVLKDVGLKKEDIAMW 318

>pdb|2F2S|A Chain A, Human Mitochondrial Acetoacetyl-Coa Thiolase Length = 406

Iteration: 1
 Score =  161 bits (408), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 94/218 (43%), Positives = 132/218 (60%), Gaps = 4/218 (1%)
Query: 210 LARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHM 269
           +A  ++  G    +VAGG E MS  P+V+N R        +++D +V DGLTD ++ IHM
Sbjct: 114 MASQSLMCGHQDVMVAGGMESMSNVPYVMN-RGSTPYGGVKLEDLIVKDGLTDVYNKIHM 172
Query: 270 GITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTR-KGDVVVAKD 328
           G  AEN AKK +I+R EQD YA  S  ++  A E G F  E++PV ++ + + DVVV +D
Sbjct: 173 GSCAENTAKKLNIARNEQDAYAINSYTRSKAAWEAGKFGNEVIPVTVTVKGQPDVVVKED 232
Query: 329 EYPKANTTVEALQKLRPVFQKD-GTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARI 387
           E  K       + KL+ VFQK+ GTVTA NAS +NDGAAA++LM+   A+  N+ PLARI
Sbjct: 233 EEYK-RVDFSKVPKLKTVFQKENGTVTAANASTLNDGAAALVLMTADAAKRLNVTPLARI 291
Query: 388 VAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYF 425
           VA + A VEP      P+ A + VL   G  KE++  +
Sbjct: 292 VAFADAAVEPIDFPIAPVYAASMVLKDVGLKKEDIAMW 329

>pdb|1ULQ|A Chain A, Crystal Structure Of Tt0182 From Thermus Thermophilus Hb8 Length = 401

Iteration: 1
 Score =  160 bits (405), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 89/218 (40%), Positives = 131/218 (60%), Gaps = 6/218 (2%)
Query: 214 AIKSGDATAIVAGGQECMSQAPHVI-NIRNGIKLNDAEMKDS-----MVFDGLTDAFHNI 267
           AI +G+    +  G E MS+AP+ +     G    +  M D+      V   +   +   
Sbjct: 102 AIWAGEGKVYIGSGVESMSRAPYAVPKPERGFPTGNLVMYDTTLGWRFVNPKMQALYGTE 161
Query: 268 HMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAK 327
            MG TAEN+A+ + I R EQD +A  S  K  +A E G F +E+VPV +   K +++V +
Sbjct: 162 SMGETAENLAEMYGIRREEQDRFALLSHQKAVRAWEEGRFQDEVVPVPVKRGKEEILVEQ 221
Query: 328 DEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARI 387
           DE P+ +T++E L  LRPVF++ GTVTAGN+S +NDGAAAVLL+S   A+A  ++PLAR+
Sbjct: 222 DEGPRRDTSLEKLAALRPVFREGGTVTAGNSSPLNDGAAAVLLVSDDYAKAHGLRPLARV 281
Query: 388 VAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYF 425
            A++ AGV P +MG GP+PA    L +AG S  ++G  
Sbjct: 282 RAIAVAGVPPRIMGIGPVPATRKALERAGLSFSDLGLI 319

>pdb|2IIK|A Chain A, Crystal Structure Of Human Peroxisomal Acetyl-Coa Acyl Transferase 1 (Acaa1) Length = 418

Iteration: 1
 Score =  132 bits (332), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 93/256 (36%), Positives = 136/256 (53%), Gaps = 17/256 (6%)
Query: 177 GTVTAGNASGINDGAAAVLLMSYKRAQARNIQPLARIA--IKSGDATAIVAGGQECMSQA 234
           G + A  A  ++D    V L +  R  +  +Q +A IA  I++G     +A G E MS A
Sbjct: 91  GAIMARIAQFLSDIPETVPLSTVNRQCSSGLQAVASIAGGIRNGSYDIGMACGVESMSLA 150
Query: 235 PHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEYAYQS 294
               +  N   +    M+     D L      I MGIT+EN+A+++ ISR +QD +A  S
Sbjct: 151 ----DRGNPGNITSRLMEKEKARDCL------IPMGITSENVAERFGISREKQDTFALAS 200
Query: 295 QVKTAKAQEGGYFDEEIVPVVISTR-----KGDVVVAKDEYPKANTTVEALQKLRPVFQK 349
           Q K A+AQ  G F  EIVPV  +       K  + V +DE  + +TT+E L KL+P F+K
Sbjct: 201 QQKAARAQSKGCFQAEIVPVTTTVHDDKGTKRSITVTQDEGIRPSTTMEGLAKLKPAFKK 260
Query: 350 DGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVN 409
           DG+ TAGN+S ++DGAAA+LL     A+   +  L  + + +  GV P +MG GP  A+ 
Sbjct: 261 DGSTTAGNSSQVSDGAAAILLARRSKAEELGLPILGVLRSYAVVGVPPDIMGIGPAYAIP 320
Query: 410 AVLAKAGWSKEEVGYF 425
             L KAG +  +V  F
Sbjct: 321 VALQKAGLTVSDVDIF 336

>pdb|1AFW|A Chain A, The 1.8 Angstrom Crystal Structure Of The Dimeric Peroxisomal Thiolase Of Saccharomyces Cerevisiae Length = 393

Iteration: 1
 Score =  124 bits (312), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 77/229 (33%), Positives = 116/229 (50%), Gaps = 26/229 (11%)
Query: 220 ATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIH----------- 268
           +T  VA  ++C S    V +I N IK+   ++  ++  + +T+ + N++           
Sbjct: 91  STPFVALNRQCSSGLTAVNDIANKIKVGQIDIGLALGVESMTNNYKNVNPLGMISSEELQ 150
Query: 269 -----------MGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVIS 317
                      MGIT EN+A  + ISR +QDE+A  S  K  KA+  G F++EI+P+ + 
Sbjct: 151 KNREAKKCLIPMGITNENVAANFKISRKDQDEFAANSYQKAYKAKNEGLFEDEILPIKLP 210
Query: 318 TRKGDVVVAKDEYPKANTTVEALQKLRPVFQKD-GTVTAGNASGINDGAAAVLLMSYKTA 376
                 +   DE P+ N T E+L  +RP F KD GT TAGNAS ++DG A VLL     A
Sbjct: 211 DGS---ICQSDEGPRPNVTAESLSSIRPAFIKDRGTTTAGNASQVSDGVAGVLLARRSVA 267
Query: 377 QARNIQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYF 425
              N+  L R +   + GV P +MG GP  A+  VL   G   +++  F
Sbjct: 268 NQLNLPVLGRYIDFQTVGVPPEIMGVGPAYAIPKVLEATGLQVQDIDIF 316

>pdb|1PXT|A Chain A, The 2.8 Angstroms Structure Of Peroxisomal 3-Ketoacyl-Coa Thiolase Of Saccharomyces Cerevisiae: A Five Layered A-B-A- B-A Structure, Constructed From Two Core Domains Of Identical Topology Length = 390

Iteration: 1
 Score =  124 bits (312), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 77/229 (33%), Positives = 116/229 (50%), Gaps = 26/229 (11%)
Query: 220 ATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIH----------- 268
           +T  VA  ++C S    V +I N IK+   ++  ++  + +T+ + N++           
Sbjct: 88  STPFVALNRQCSSGLTAVNDIANKIKVGQIDIGLALGVESMTNNYKNVNPLGMISSEELQ 147
Query: 269 -----------MGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVIS 317
                      MGIT EN+A  + ISR +QDE+A  S  K  KA+  G F++EI+P+ + 
Sbjct: 148 KNREAKKCLIPMGITNENVAANFKISRKDQDEFAANSYQKAYKAKNEGLFEDEILPIKLP 207
Query: 318 TRKGDVVVAKDEYPKANTTVEALQKLRPVFQKD-GTVTAGNASGINDGAAAVLLMSYKTA 376
                 +   DE P+ N T E+L  +RP F KD GT TAGNAS ++DG A VLL     A
Sbjct: 208 DGS---ICQSDEGPRPNVTAESLSSIRPAFIKDRGTTTAGNASQVSDGVAGVLLARRSVA 264
Query: 377 QARNIQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYF 425
              N+  L R +   + GV P +MG GP  A+  VL   G   +++  F
Sbjct: 265 NQLNLPVLGRYIDFQTVGVPPEIMGVGPAYAIPKVLEATGLQVQDIDIF 313

>pdb|2WUA|A Chain A, Structure Of The Peroxisomal 3-Ketoacyl-Coa Thiolase From Sunflower Length = 440

Iteration: 1
 Score =  122 bits (305), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 65/165 (39%), Positives = 101/165 (61%), Gaps = 6/165 (3%)
Query: 267 IHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPV---VISTRKGD- 322
           + MGIT+EN+A+K+SI+R EQD+ A  S  KTA A   G F +EI+P+   ++  + GD 
Sbjct: 177 LPMGITSENVAQKFSITRQEQDQAAVGSHRKTAAATAAGRFKDEIIPIKTKIVDPKTGDE 236
Query: 323 --VVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKTAQARN 380
             V ++ D+  +  T++  L KL+PVF+KDG+ TAG +S ++DGA AVLLM    A  + 
Sbjct: 237 KPVTISVDDGIRPGTSLADLAKLKPVFRKDGSTTAGTSSQVSDGAGAVLLMKRSIALQKG 296
Query: 381 IQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYF 425
           +  L      ++ GV P++MG GP  A+ A +  AG   +++  F
Sbjct: 297 LPILGVFRTFAAVGVPPSIMGIGPAVAIPAAVKAAGLQIDDIDLF 341

>pdb|2WU9|A Chain A, Crystal Structure Of Peroxisomal Kat2 From Arabidopsis Thaliana Length = 442

Iteration: 1
 Score =  121 bits (303), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 65/165 (39%), Positives = 101/165 (61%), Gaps = 6/165 (3%)
Query: 267 IHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPV---VISTRKGD- 322
           + MG+T+EN+A+++ +SR EQD+ A  S  K A A   G F +EI+PV   ++  + GD 
Sbjct: 174 LPMGVTSENVAQRFGVSRQEQDQAAVDSHRKAAAATAAGKFKDEIIPVKTKLVDPKTGDE 233
Query: 323 --VVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKTAQARN 380
             + V+ D+  +  TT+ +L KL+PVF+KDGT TAGN+S ++DGA AVLLM    A  + 
Sbjct: 234 KPITVSVDDGIRPTTTLASLGKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMQKG 293
Query: 381 IQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYF 425
           +  L      ++ GV+P +MG GP  A+ A +  AG   +++  F
Sbjct: 294 LPVLGVFRTFAAVGVDPAIMGIGPAVAIPAAVKAAGLELDDIDLF 338

>pdb|2C7Y|A Chain A, Plant Enzyme Length = 404

Iteration: 1
 Score =  121 bits (303), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 65/165 (39%), Positives = 101/165 (61%), Gaps = 6/165 (3%)
Query: 267 IHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPV---VISTRKGD- 322
           + MG+T+EN+A+++ +SR EQD+ A  S  K A A   G F +EI+PV   ++  + GD 
Sbjct: 157 LPMGVTSENVAQRFGVSRQEQDQAAVDSHRKAAAATAAGKFKDEIIPVKTKLVDPKTGDE 216
Query: 323 --VVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKTAQARN 380
             + V+ D+  +  TT+ +L KL+PVF+KDGT TAGN+S ++DGA AVLLM    A  + 
Sbjct: 217 KPITVSVDDGIRPTTTLASLGKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMQKG 276
Query: 381 IQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYF 425
           +  L      ++ GV+P +MG GP  A+ A +  AG   +++  F
Sbjct: 277 LPVLGVFRTFAAVGVDPAIMGIGPAVAIPAAVKAAGLELDDIDLF 321

>pdb|3SVK|A Chain A, Crystal Structure Of Acetyl-Coa Acetyltransferase From Mycobacterium Avium Length = 407

Iteration: 1
 Score =  118 bits (295), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 94/299 (31%), Positives = 146/299 (48%), Gaps = 40/299 (13%)
Query: 153 KDEYPKANTTVEA---LQKLRPVFQKDGTV--TAGNASGINDGAAAVLLMSYKRAQARNI 207
           +  YP  + T+ +   L  + PV  + G +  TA  A+G+ +    V L  +  +    +
Sbjct: 44  RRRYPDLDETLISDMILGVVSPVGDQGGDIARTAVLAAGLPETTGGVQLNRFCASGLEAV 103
Query: 208 QPLARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNI 267
              A+  ++SG    ++AGG E MS+ P  +    G    D E    + F         +
Sbjct: 104 NTAAQ-KVRSGWDDLVLAGGVESMSRVP--MGSDGGAWATDPETNYRIGF---------V 151
Query: 268 HMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAK 327
             GI A+ IA     SR + D YA +SQ K A A  GGYF + +VPV    + G V++  
Sbjct: 152 PQGIGADLIATLEGFSREDVDAYALRSQQKAAAAWSGGYFAKSVVPV--RDQNGLVILDH 209
Query: 328 DEYPKANTTVEALQKLRPVFQKDGTV---------------------TAGNASGINDGAA 366
           DE+ + +TT+E L KL+  F   G +                     T GN+SGI DGAA
Sbjct: 210 DEHMRPDTTMEGLAKLKTAFDGVGEMGGFDDVALQKYHWVEKINHVHTGGNSSGIVDGAA 269
Query: 367 AVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYF 425
            VL+ S K  +++ + P ARIVA +++G +P +M TGP PA   VL +AG + +++  F
Sbjct: 270 LVLVGSEKAGKSQGLTPRARIVATATSGSDPVIMLTGPTPATRKVLDRAGLTIDDIDLF 328

>pdb|1WDK|C Chain C, Fatty Acid Beta-Oxidation Multienzyme Complex From Pseudomonas Fragi, Form I (Native2) Length = 390

Iteration: 1
 Score =  116 bits (290), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 74/214 (34%), Positives = 117/214 (54%), Gaps = 14/214 (6%)
Query: 214 AIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITA 273
           AI +G+    V GG E M      +++ +G+  N      +    G+        MG+TA
Sbjct: 107 AIMTGNGDVFVVGGVEHMGH----VSMMHGVDPNPHMSLYAAKASGM--------MGLTA 154
Query: 274 ENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDV-VVAKDEYPK 332
           E + K   ISR +QD +A +S     KA   G F +EI+P+      G + +   DE  +
Sbjct: 155 EMLGKMHGISREQQDAFAVRSHQLAHKATVEGKFKDEIIPMQGYDENGFLKIFDYDETIR 214
Query: 333 ANTTVEALQKLRPVFQ-KDGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMS 391
            +TT+E+L  L+P F  K GTVTAG +S I DGA+ +++MS + A+   ++PLA I +M+
Sbjct: 215 PDTTLESLAALKPAFNPKGGTVTAGTSSQITDGASCMIVMSAQRAKDLGLEPLAVIRSMA 274
Query: 392 SAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYF 425
            AGV+P +MG GP+PA    L +AG +  ++ + 
Sbjct: 275 VAGVDPAIMGYGPVPATQKALKRAGLNMADIDFI 308

>pdb|3GOA|A Chain A, Crystal Structure Of The Salmonella Typhimurium Fada 3- Ketoacyl-Coa Thiolase Length = 387

Iteration: 1
 Score =  115 bits (287), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 75/217 (34%), Positives = 109/217 (50%), Gaps = 22/217 (10%)
Query: 215 IKSGDATAIVAGGQECMSQAP--HVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGIT 272
           I +GDA   + GG E     P  H ++   G+  N A+                   G+T
Sbjct: 105 IXTGDAQVCLVGGVEHXGHVPXSHGVDFHPGLSRNVAKAAGXX--------------GLT 150
Query: 273 AENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAK---DE 329
           AE +++   ISR  QD++A +S  +   A + G F  EI+P        D V+ +   DE
Sbjct: 151 AEXLSRLHGISREXQDQFAARSHARAWAATQSGAFKTEIIPT--GGHDADGVLKQFNYDE 208
Query: 330 YPKANTTVEALQKLRPVFQK-DGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARIV 388
             +  TTVEAL  LRP F    GTVTAG +S ++DGAAA L+ S   A+   ++P ARI 
Sbjct: 209 VIRPETTVEALSTLRPAFDPVSGTVTAGTSSALSDGAAAXLVXSESRARELGLKPRARIR 268
Query: 389 AMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYF 425
           + +  G +P++ G GP+PA    L KAG S  ++  F
Sbjct: 269 SXAVVGCDPSIXGYGPVPASKLALKKAGLSASDIDVF 305

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	441
2vu1_A	392	Acetyl-COA acetyltransferase; acyltransferase, PHB	1e-126
2vu1_A	392	Acetyl-COA acetyltransferase; acyltransferase, PHB	8e-82
2vu1_A	392	Acetyl-COA acetyltransferase; acyltransferase, PHB	4e-36
4dd5_A	396	Acetyl-COA acetyltransferase; structural genomics,	1e-125
4dd5_A	396	Acetyl-COA acetyltransferase; structural genomics,	5e-81
4dd5_A	396	Acetyl-COA acetyltransferase; structural genomics,	2e-36
4e1l_A	395	Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich,	1e-124
4e1l_A	395	Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich,	2e-82
1wl4_A	397	Acetyl-coenzyme A acetyltransferase 2; thiolase fo	1e-123
1wl4_A	397	Acetyl-coenzyme A acetyltransferase 2; thiolase fo	1e-78
1wl4_A	397	Acetyl-coenzyme A acetyltransferase 2; thiolase fo	3e-33
3ss6_A	394	Acetyl-COA acetyltransferase; structural genomics,	1e-122
3ss6_A	394	Acetyl-COA acetyltransferase; structural genomics,	3e-78
3ss6_A	394	Acetyl-COA acetyltransferase; structural genomics,	3e-36
1ulq_A	401	Putative acetyl-COA acetyltransferase; structural	1e-111
1ulq_A	401	Putative acetyl-COA acetyltransferase; structural	2e-69
1ulq_A	401	Putative acetyl-COA acetyltransferase; structural	9e-34
2ib8_A	395	Acetyl-COA acetyltransferase; thiolase fold, potas	1e-109
2ib8_A	395	Acetyl-COA acetyltransferase; thiolase fold, potas	1e-67
2ib8_A	395	Acetyl-COA acetyltransferase; thiolase fold, potas	6e-28
1wdk_C	390	3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrame	1e-100
1wdk_C	390	3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrame	1e-58
1wdk_C	390	3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrame	1e-29
1afw_A	393	3-ketoacetyl-COA thiolase; fatty acid metabolism;	2e-99
1afw_A	393	3-ketoacetyl-COA thiolase; fatty acid metabolism;	2e-57
1afw_A	393	3-ketoacetyl-COA thiolase; fatty acid metabolism;	3e-29
2iik_A	418	3-ketoacyl-COA thiolase, peroxisomal; fatty acid m	1e-94
2iik_A	418	3-ketoacyl-COA thiolase, peroxisomal; fatty acid m	5e-60
3goa_A	387	3-ketoacyl-COA thiolase; metabolism, fatty acid, p	2e-92
3goa_A	387	3-ketoacyl-COA thiolase; metabolism, fatty acid, p	2e-51
3goa_A	387	3-ketoacyl-COA thiolase; metabolism, fatty acid, p	6e-28
2wu9_A	442	3-ketoacyl-COA thiolase 2, peroxisomal; cysteine o	5e-90
2wu9_A	442	3-ketoacyl-COA thiolase 2, peroxisomal; cysteine o	8e-55
3svk_A	407	Acetyl-COA acetyltransferase; ssgcid, NIH, niaid,	1e-72
3svk_A	407	Acetyl-COA acetyltransferase; ssgcid, NIH, niaid,	1e-45
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-06

>2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ... Length = 392

 Score =  370 bits (953), Expect = e-126
 Identities = 116/216 (53%), Positives = 150/216 (69%)

Query: 210 LARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHM 269
           L    I +GDA+ IVAGG E MS APH  ++R G+K+ D +M D+M+ DGLTDAF+  HM
Sbjct: 98  LGMQQIATGDASIIVAGGMESMSMAPHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHM 157

Query: 270 GITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDE 329
           G TAEN+AK+W +SR EQD +A  SQ K   AQ+ G F +EIVP ++  RKGD+ V  DE
Sbjct: 158 GTTAENVAKQWQLSRDEQDAFAVASQNKAEAAQKDGRFKDEIVPFIVKGRKGDITVDADE 217

Query: 330 YPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARIVA 389
           Y +   T++++ KLRP F K+GTVTAGNASG+NDGAAA LLMS   A  R IQPL RIV+
Sbjct: 218 YIRHGATLDSMAKLRPAFDKEGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVS 277

Query: 390 MSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYF 425
            ++ GV+P +MGTGPIPA    L +AGW   ++   
Sbjct: 278 WATVGVDPKVMGTGPIPASRKALERAGWKIGDLDLV 313

>2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ... Length = 392

 Score =  256 bits (657), Expect = 8e-82
 Identities = 77/137 (56%), Positives = 101/137 (73%)

Query: 1   MSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEY 60
           MS APH  ++R G+K+ D +M D+M+ DGLTDAF+  HMG TAEN+AK+W +SR EQD +
Sbjct: 119 MSMAPHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDAF 178

Query: 61  AYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTSVDALQKLRPVFQKD 120
           A  SQ K   AQ+ G F +EIVP ++  RKGD+ V  DEY +   ++D++ KLRP F K+
Sbjct: 179 AVASQNKAEAAQKDGRFKDEIVPFIVKGRKGDITVDADEYIRHGATLDSMAKLRPAFDKE 238

Query: 121 GTVTAGNASGINDGAAA 137
           GTVTAGNASG+NDGAAA
Sbjct: 239 GTVTAGNASGLNDGAAA 255

>2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ... Length = 392

 Score =  136 bits (344), Expect = 4e-36
 Identities = 43/71 (60%), Positives = 51/71 (71%)

Query: 144 TRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQ 203
            RKGD+ V  DEY +   T++++ KLRP F K+GTVTAGNASG+NDGAAA LLMS   A 
Sbjct: 206 GRKGDITVDADEYIRHGATLDSMAKLRPAFDKEGTVTAGNASGLNDGAAAALLMSEAEAS 265

Query: 204 ARNIQPLARIA 214
            R IQPL RI 
Sbjct: 266 RRGIQPLGRIV 276

>4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile} Length = 396

 Score =  368 bits (948), Expect = e-125
 Identities = 118/217 (54%), Positives = 152/217 (70%), Gaps = 1/217 (0%)

Query: 210 LARIAIKSGDATAIVAGGQECMSQAPHVI-NIRNGIKLNDAEMKDSMVFDGLTDAFHNIH 268
           +A   I  GDA  ++ GG E MS +P+++ + R G ++ DA   DSM+ DGL+D F+N H
Sbjct: 102 MASQLIALGDADIMLVGGAENMSMSPYLVPSARYGARMGDAAFVDSMIKDGLSDIFNNYH 161

Query: 269 MGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKD 328
           MGITAENIA++W+I+R EQDE A  SQ K  KAQ  G FDEEIVPVVI  RKGD VV KD
Sbjct: 162 MGITAENIAEQWNITREEQDELALASQNKAEKAQAEGKFDEEIVPVVIKGRKGDTVVDKD 221

Query: 329 EYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARIV 388
           EY K  TT+E L KLRP F+KDGTVTAGNASGINDGAA +++M+ + A+   I+PLA IV
Sbjct: 222 EYIKPGTTMEKLAKLRPAFKKDGTVTAGNASGINDGAAMLVVMAKEKAEELGIEPLATIV 281

Query: 389 AMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYF 425
           +  +AGV+P +MG GP+PA    L  A  + E++   
Sbjct: 282 SYGTAGVDPKIMGYGPVPATKKALEAANMTIEDIDLV 318

>4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile} Length = 396

 Score =  254 bits (652), Expect = 5e-81
 Identities = 87/138 (63%), Positives = 105/138 (76%), Gaps = 1/138 (0%)

Query: 1   MSQAPHVI-NIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDE 59
           MS +P+++ + R G ++ DA   DSM+ DGL+D F+N HMGITAENIA++W+I+R EQDE
Sbjct: 123 MSMSPYLVPSARYGARMGDAAFVDSMIKDGLSDIFNNYHMGITAENIAEQWNITREEQDE 182

Query: 60  YAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTSVDALQKLRPVFQK 119
            A  SQ K  KAQ  G FDEEIVPVVI  RKGD VV KDEY K  T+++ L KLRP F+K
Sbjct: 183 LALASQNKAEKAQAEGKFDEEIVPVVIKGRKGDTVVDKDEYIKPGTTMEKLAKLRPAFKK 242

Query: 120 DGTVTAGNASGINDGAAA 137
           DGTVTAGNASGINDGAA 
Sbjct: 243 DGTVTAGNASGINDGAAM 260

>4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile} Length = 396

 Score =  137 bits (347), Expect = 2e-36
 Identities = 45/71 (63%), Positives = 55/71 (77%)

Query: 144 TRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQ 203
            RKGD VV KDEY K  TT+E L KLRP F+KDGTVTAGNASGINDGAA +++M+ ++A+
Sbjct: 211 GRKGDTVVDKDEYIKPGTTMEKLAKLRPAFKKDGTVTAGNASGINDGAAMLVVMAKEKAE 270

Query: 204 ARNIQPLARIA 214
              I+PLA I 
Sbjct: 271 ELGIEPLATIV 281

>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile} Length = 395

 Score =  364 bits (936), Expect = e-124
 Identities = 114/218 (52%), Positives = 146/218 (66%), Gaps = 2/218 (0%)

Query: 210 LARIAIKSGDATAIVAGGQECMSQAPHVI-NIRNGIKLNDAEMKDSMVFDGLTDAFHNIH 268
           LA  +I SG+   ++AGG E MSQAP+++   R G K+ +  M DSM+ DGL DAF+  H
Sbjct: 100 LAAQSITSGENDVVIAGGTENMSQAPYIVPTARFGSKMGNITMVDSMLTDGLIDAFNQYH 159

Query: 269 MGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDV-VVAK 327
           MGITAENIA K+  +R  QD+ A +SQ K   A +   F EEIVPV +  R+G +  + K
Sbjct: 160 MGITAENIATKFEFTREMQDKLALESQNKAENAIKNNRFKEEIVPVDVLIRRGKIETIDK 219

Query: 328 DEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARI 387
           DEYPK   T E L KL+P F+KDGTVTAGNASGINDGAA ++LMS + A    I+PLA+I
Sbjct: 220 DEYPKLGMTFEGLSKLKPAFKKDGTVTAGNASGINDGAAMLILMSQQKADELGIRPLAKI 279

Query: 388 VAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYF 425
            + +SAGVEP +MGTGPIPA    L KAG S  ++   
Sbjct: 280 KSYASAGVEPEVMGTGPIPATRKALKKAGLSINDIDLI 317

>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile} Length = 395

 Score =  258 bits (661), Expect = 2e-82
 Identities = 86/215 (40%), Positives = 109/215 (50%), Gaps = 56/215 (26%)

Query: 1   MSQAPHVI-NIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDE 59
           MSQAP+++   R G K+ +  M DSM+ DGL DAF+  HMGITAENIA K+  +R  QD+
Sbjct: 121 MSQAPYIVPTARFGSKMGNITMVDSMLTDGLIDAFNQYHMGITAENIATKFEFTREMQDK 180

Query: 60  YAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTSVDALQKLRPVFQK 119
            A +SQ K   A +   F EEIVPV +  R+G +                         K
Sbjct: 181 LALESQNKAENAIKNNRFKEEIVPVDVLIRRGKIE---------------------TIDK 219

Query: 120 DGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTV 179
           D                                  EYPK   T E L KL+P F+KDGTV
Sbjct: 220 D----------------------------------EYPKLGMTFEGLSKLKPAFKKDGTV 245

Query: 180 TAGNASGINDGAAAVLLMSYKRAQARNIQPLARIA 214
           TAGNASGINDGAA ++LMS ++A    I+PLA+I 
Sbjct: 246 TAGNASGINDGAAMLILMSQQKADELGIRPLAKIK 280

>1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A Length = 397

 Score =  362 bits (931), Expect = e-123
 Identities = 121/218 (55%), Positives = 159/218 (72%), Gaps = 2/218 (0%)

Query: 210 LARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHM 269
           LA  +I  GD++ +VAGG E MS+APH+  +R G+K+ +  + DS++ DGLTDAFHN HM
Sbjct: 101 LAVQSIGIGDSSIVVAGGMENMSKAPHLAYLRTGVKIGEMPLTDSILCDGLTDAFHNCHM 160

Query: 270 GITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDE 329
           GITAEN+AKKW +SR +QD+ A  SQ +T  AQ+ G+FD+EIVPV++STRKG + V  DE
Sbjct: 161 GITAENVAKKWQVSREDQDKVAVLSQNRTENAQKAGHFDKEIVPVLVSTRKGLIEVKTDE 220

Query: 330 YPKANTTVEALQKLRPVFQKDGT--VTAGNASGINDGAAAVLLMSYKTAQARNIQPLARI 387
           +P+  + +EA+ KL+P F  DGT  VT  NASGINDGAAAV+LM    A  R + PLARI
Sbjct: 221 FPRHGSNIEAMSKLKPYFLTDGTGTVTPANASGINDGAAAVVLMKKSEADKRGLTPLARI 280

Query: 388 VAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYF 425
           V+ S  GVEP++MG GPIPA+   + KAGWS E+V  F
Sbjct: 281 VSWSQVGVEPSIMGIGPIPAIKQAVTKAGWSLEDVDIF 318

>1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A Length = 397

 Score =  248 bits (635), Expect = 1e-78
 Identities = 79/139 (56%), Positives = 107/139 (76%), Gaps = 2/139 (1%)

Query: 1   MSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEY 60
           MS+APH+  +R G+K+ +  + DS++ DGLTDAFHN HMGITAEN+AKKW +SR +QD+ 
Sbjct: 122 MSKAPHLAYLRTGVKIGEMPLTDSILCDGLTDAFHNCHMGITAENVAKKWQVSREDQDKV 181

Query: 61  AYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTSVDALQKLRPVFQKD 120
           A  SQ +T  AQ+ G+FD+EIVPV++STRKG + V  DE+P+  ++++A+ KL+P F  D
Sbjct: 182 AVLSQNRTENAQKAGHFDKEIVPVLVSTRKGLIEVKTDEFPRHGSNIEAMSKLKPYFLTD 241

Query: 121 GT--VTAGNASGINDGAAA 137
           GT  VT  NASGINDGAAA
Sbjct: 242 GTGTVTPANASGINDGAAA 260

>1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A Length = 397

 Score =  128 bits (324), Expect = 3e-33
 Identities = 40/73 (54%), Positives = 49/73 (67%), Gaps = 2/73 (2%)

Query: 144 TRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGT--VTAGNASGINDGAAAVLLMSYKR 201
           TRKG + V  DE+P+  + +EA+ KL+P F  DGT  VT  NASGINDGAAAV+LM    
Sbjct: 209 TRKGLIEVKTDEFPRHGSNIEAMSKLKPYFLTDGTGTVTPANASGINDGAAAVVLMKKSE 268

Query: 202 AQARNIQPLARIA 214
           A  R + PLARI 
Sbjct: 269 ADKRGLTPLARIV 281

>3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis} Length = 394

 Score =  359 bits (925), Expect = e-122
 Identities = 101/217 (46%), Positives = 145/217 (66%), Gaps = 2/217 (0%)

Query: 210 LARIAIKSGDATAIVAGGQECMSQAPHVI-NIRNGIKLNDAEMKDSMVFDGLTDAFHNIH 268
            A + I+ G +  +VAGG E MS +P+ +   R G +L   E++D++  + L D  H+I 
Sbjct: 100 SAAMQIQLGVSEVVVAGGVEAMSSSPYALKQHRWGQRLQHGEIRDTVW-EVLEDPIHHIM 158

Query: 269 MGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKD 328
           MG TAEN+ +++ I+R EQDE A +S     KA E GYFD++IVP+ I  R+ +VV +KD
Sbjct: 159 MGETAENLVEQYEITREEQDEVALRSHTLALKAIESGYFDDQIVPITIKERRKEVVFSKD 218

Query: 329 EYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARIV 388
           E+P+A+ T E L  L+P F+KDG+VTAGNASG+NDG+A ++LMS + A+ + +QPLARIV
Sbjct: 219 EHPRADITAEKLAGLKPAFRKDGSVTAGNASGLNDGSAVLVLMSEEKAKEKGLQPLARIV 278

Query: 389 AMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYF 425
             S AGV+P +MG GP PA+   L K  WS E+    
Sbjct: 279 GYSVAGVDPKIMGIGPAPAIRKGLEKVDWSLEDADLL 315

>3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis} Length = 394

 Score =  247 bits (633), Expect = 3e-78
 Identities = 64/138 (46%), Positives = 96/138 (69%), Gaps = 2/138 (1%)

Query: 1   MSQAPHVI-NIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDE 59
           MS +P+ +   R G +L   E++D++  + L D  H+I MG TAEN+ +++ I+R EQDE
Sbjct: 121 MSSSPYALKQHRWGQRLQHGEIRDTVW-EVLEDPIHHIMMGETAENLVEQYEITREEQDE 179

Query: 60  YAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTSVDALQKLRPVFQK 119
            A +S     KA E GYFD++IVP+ I  R+ +VV +KDE+P+A+ + + L  L+P F+K
Sbjct: 180 VALRSHTLALKAIESGYFDDQIVPITIKERRKEVVFSKDEHPRADITAEKLAGLKPAFRK 239

Query: 120 DGTVTAGNASGINDGAAA 137
           DG+VTAGNASG+NDG+A 
Sbjct: 240 DGSVTAGNASGLNDGSAV 257

>3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis} Length = 394

 Score =  136 bits (345), Expect = 3e-36
 Identities = 39/71 (54%), Positives = 57/71 (80%)

Query: 144 TRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQ 203
            R+ +VV +KDE+P+A+ T E L  L+P F+KDG+VTAGNASG+NDG+A ++LMS ++A+
Sbjct: 208 ERRKEVVFSKDEHPRADITAEKLAGLKPAFRKDGSVTAGNASGLNDGSAVLVLMSEEKAK 267

Query: 204 ARNIQPLARIA 214
            + +QPLARI 
Sbjct: 268 EKGLQPLARIV 278

>1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 Length = 401

 Score =  332 bits (854), Expect = e-111
 Identities = 89/219 (40%), Positives = 131/219 (59%), Gaps = 6/219 (2%)

Query: 210 LARIAIKSGDATAIVAGGQECMSQAPHVI-NIRNGIKLNDAEMKDS-----MVFDGLTDA 263
            A  AI +G+    +  G E MS+AP+ +     G    +  M D+      V   +   
Sbjct: 98  QAARAIWAGEGKVYIGSGVESMSRAPYAVPKPERGFPTGNLVMYDTTLGWRFVNPKMQAL 157

Query: 264 FHNIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDV 323
           +    MG TAEN+A+ + I R EQD +A  S  K  +A E G F +E+VPV +   K ++
Sbjct: 158 YGTESMGETAENLAEMYGIRREEQDRFALLSHQKAVRAWEEGRFQDEVVPVPVKRGKEEI 217

Query: 324 VVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKTAQARNIQP 383
           +V +DE P+ +T++E L  LRPVF++ GTVTAGN+S +NDGAAAVLL+S   A+A  ++P
Sbjct: 218 LVEQDEGPRRDTSLEKLAALRPVFREGGTVTAGNSSPLNDGAAAVLLVSDDYAKAHGLRP 277

Query: 384 LARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEV 422
           LAR+ A++ AGV P +MG GP+PA    L +AG S  ++
Sbjct: 278 LARVRAIAVAGVPPRIMGIGPVPATRKALERAGLSFSDL 316

>1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 Length = 401

 Score =  224 bits (574), Expect = 2e-69
 Identities = 58/143 (40%), Positives = 85/143 (59%), Gaps = 6/143 (4%)

Query: 1   MSQAPHVI-NIRNGIKLNDAEMKDS-----MVFDGLTDAFHNIHMGITAENIAKKWSISR 54
           MS+AP+ +     G    +  M D+      V   +   +    MG TAEN+A+ + I R
Sbjct: 119 MSRAPYAVPKPERGFPTGNLVMYDTTLGWRFVNPKMQALYGTESMGETAENLAEMYGIRR 178

Query: 55  LEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTSVDALQKLR 114
            EQD +A  S  K  +A E G F +E+VPV +   K +++V +DE P+ +TS++ L  LR
Sbjct: 179 EEQDRFALLSHQKAVRAWEEGRFQDEVVPVPVKRGKEEILVEQDEGPRRDTSLEKLAALR 238

Query: 115 PVFQKDGTVTAGNASGINDGAAA 137
           PVF++ GTVTAGN+S +NDGAAA
Sbjct: 239 PVFREGGTVTAGNSSPLNDGAAA 261

>1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 Length = 401

 Score =  129 bits (328), Expect = 9e-34
 Identities = 40/82 (48%), Positives = 57/82 (69%), Gaps = 3/82 (3%)

Query: 144 TRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQ 203
             K +++V +DE P+ +T++E L  LRPVF++ GTVTAGN+S +NDGAAAVLL+S   A+
Sbjct: 212 RGKEEILVEQDEGPRRDTSLEKLAALRPVFREGGTVTAGNSSPLNDGAAAVLLVSDDYAK 271

Query: 204 ARNIQPLARIAIKSGDATAIVA 225
           A  ++PLAR+      A A V 
Sbjct: 272 AHGLRPLARVR---AIAVAGVP 290

>2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A* Length = 395

 Score =  326 bits (838), Expect = e-109
 Identities = 94/218 (43%), Positives = 131/218 (60%), Gaps = 4/218 (1%)

Query: 210 LARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHM 269
           +A  ++  G    +VAGG E MS  P+V+N R        +++D +V DGLTD ++ IHM
Sbjct: 103 MASQSLMCGHQDVMVAGGMESMSNVPYVMN-RGSTPYGGVKLEDLIVKDGLTDVYNKIHM 161

Query: 270 GITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKG-DVVVAKD 328
           G  AEN AKK +I+R EQD YA  S  ++  A E G F  E++PV ++ +   DVVV +D
Sbjct: 162 GSCAENTAKKLNIARNEQDAYAINSYTRSKAAWEAGKFGNEVIPVTVTVKGQPDVVVKED 221

Query: 329 EYPKANTTVEALQKLRPVFQKD-GTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARI 387
           E  K       + KL+ VFQK+ GTVTA NAS +NDGAAA++LM+   A+  N+ PLARI
Sbjct: 222 EEYK-RVDFSKVPKLKTVFQKENGTVTAANASTLNDGAAALVLMTADAAKRLNVTPLARI 280

Query: 388 VAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYF 425
           VA + A VEP      P+ A + VL   G  KE++  +
Sbjct: 281 VAFADAAVEPIDFPIAPVYAASMVLKDVGLKKEDIAMW 318

>2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A* Length = 395

 Score =  219 bits (561), Expect = 1e-67
 Identities = 65/139 (46%), Positives = 87/139 (62%), Gaps = 4/139 (2%)

Query: 1   MSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEY 60
           MS  P+V+N R        +++D +V DGLTD ++ IHMG  AEN AKK +I+R EQD Y
Sbjct: 124 MSNVPYVMN-RGSTPYGGVKLEDLIVKDGLTDVYNKIHMGSCAENTAKKLNIARNEQDAY 182

Query: 61  AYQSQVKTAKAQEGGYFDEEIVPVVISTRKG-DVVVAKDEYPKANTSVDALQKLRPVFQK 119
           A  S  ++  A E G F  E++PV ++ +   DVVV +DE  K       + KL+ VFQK
Sbjct: 183 AINSYTRSKAAWEAGKFGNEVIPVTVTVKGQPDVVVKEDEEYK-RVDFSKVPKLKTVFQK 241

Query: 120 D-GTVTAGNASGINDGAAA 137
           + GTVTA NAS +NDGAAA
Sbjct: 242 ENGTVTAANASTLNDGAAA 260

>2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A* Length = 395

 Score =  113 bits (285), Expect = 6e-28
 Identities = 36/71 (50%), Positives = 47/71 (66%), Gaps = 2/71 (2%)

Query: 145 RKGDVVVAKDEYPKANTTVEALQKLRPVFQKD-GTVTAGNASGINDGAAAVLLMSYKRAQ 203
            + DVVV +DE  K       + KL+ VFQK+ GTVTA NAS +NDGAAA++LM+   A+
Sbjct: 212 GQPDVVVKEDEEYK-RVDFSKVPKLKTVFQKENGTVTAANASTLNDGAAALVLMTADAAK 270

Query: 204 ARNIQPLARIA 214
             N+ PLARI 
Sbjct: 271 RLNVTPLARIV 281

>1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C* Length = 390

 Score =  304 bits (781), Expect = e-100
 Identities = 74/214 (34%), Positives = 111/214 (51%), Gaps = 14/214 (6%)

Query: 214 AIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITA 273
           AI +G+    V GG E M     +               D      L  A  +  MG+TA
Sbjct: 107 AIMTGNGDVFVVGGVEHMGHVSMMHG------------VDPNPHMSLYAAKASGMMGLTA 154

Query: 274 ENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGD-VVVAKDEYPK 332
           E + K   ISR +QD +A +S     KA   G F +EI+P+      G   +   DE  +
Sbjct: 155 EMLGKMHGISREQQDAFAVRSHQLAHKATVEGKFKDEIIPMQGYDENGFLKIFDYDETIR 214

Query: 333 ANTTVEALQKLRPVFQ-KDGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMS 391
            +TT+E+L  L+P F  K GTVTAG +S I DGA+ +++MS + A+   ++PLA I +M+
Sbjct: 215 PDTTLESLAALKPAFNPKGGTVTAGTSSQITDGASCMIVMSAQRAKDLGLEPLAVIRSMA 274

Query: 392 SAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYF 425
            AGV+P +MG GP+PA    L +AG +  ++ + 
Sbjct: 275 VAGVDPAIMGYGPVPATQKALKRAGLNMADIDFI 308

>1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C* Length = 390

 Score =  196 bits (500), Expect = 1e-58
 Identities = 44/139 (31%), Positives = 64/139 (46%), Gaps = 14/139 (10%)

Query: 1   MSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEY 60
           M     +               D      L  A  +  MG+TAE + K   ISR +QD +
Sbjct: 124 MGHVSMMHG------------VDPNPHMSLYAAKASGMMGLTAEMLGKMHGISREQQDAF 171

Query: 61  AYQSQVKTAKAQEGGYFDEEIVPVVISTRKGD-VVVAKDEYPKANTSVDALQKLRPVFQ- 118
           A +S     KA   G F +EI+P+      G   +   DE  + +T++++L  L+P F  
Sbjct: 172 AVRSHQLAHKATVEGKFKDEIIPMQGYDENGFLKIFDYDETIRPDTTLESLAALKPAFNP 231

Query: 119 KDGTVTAGNASGINDGAAA 137
           K GTVTAG +S I DGA+ 
Sbjct: 232 KGGTVTAGTSSQITDGASC 250

>1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C* Length = 390

 Score =  117 bits (297), Expect = 1e-29
 Identities = 30/72 (41%), Positives = 45/72 (62%), Gaps = 2/72 (2%)

Query: 144 TRKGD-VVVAKDEYPKANTTVEALQKLRPVFQ-KDGTVTAGNASGINDGAAAVLLMSYKR 201
              G   +   DE  + +TT+E+L  L+P F  K GTVTAG +S I DGA+ +++MS +R
Sbjct: 199 DENGFLKIFDYDETIRPDTTLESLAALKPAFNPKGGTVTAGTSSQITDGASCMIVMSAQR 258

Query: 202 AQARNIQPLARI 213
           A+   ++PLA I
Sbjct: 259 AKDLGLEPLAVI 270

>1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A Length = 393

 Score =  301 bits (774), Expect = 2e-99
 Identities = 74/213 (34%), Positives = 103/213 (48%), Gaps = 11/213 (5%)

Query: 214 AIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITA 273
            IK G     +A G E M+     +N           +    +          I MGIT 
Sbjct: 114 KIKVGQIDIGLALGVESMTNNYKNVN-------PLGMISSEELQKNREAKKCLIPMGITN 166

Query: 274 ENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKA 333
           EN+A  + ISR +QDE+A  S  K  KA+  G F++EI+P+ +       +   DE P+ 
Sbjct: 167 ENVAANFKISRKDQDEFAANSYQKAYKAKNEGLFEDEILPIKL---PDGSICQSDEGPRP 223

Query: 334 NTTVEALQKLRPVFQKD-GTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSS 392
           N T E+L  +RP F KD GT TAGNAS ++DG A VLL     A   N+  L R +   +
Sbjct: 224 NVTAESLSSIRPAFIKDRGTTTAGNASQVSDGVAGVLLARRSVANQLNLPVLGRYIDFQT 283

Query: 393 AGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYF 425
            GV P +MG GP  A+  VL   G   +++  F
Sbjct: 284 VGVPPEIMGVGPAYAIPKVLEATGLQVQDIDIF 316

>1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A Length = 393

 Score =  193 bits (492), Expect = 2e-57
 Identities = 47/138 (34%), Positives = 69/138 (50%), Gaps = 11/138 (7%)

Query: 1   MSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEY 60
           M+     +N           +    +          I MGIT EN+A  + ISR +QDE+
Sbjct: 131 MTNNYKNVN-------PLGMISSEELQKNREAKKCLIPMGITNENVAANFKISRKDQDEF 183

Query: 61  AYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTSVDALQKLRPVFQKD 120
           A  S  K  KA+  G F++EI+P+ +       +   DE P+ N + ++L  +RP F KD
Sbjct: 184 AANSYQKAYKAKNEGLFEDEILPIKL---PDGSICQSDEGPRPNVTAESLSSIRPAFIKD 240

Query: 121 -GTVTAGNASGINDGAAA 137
            GT TAGNAS ++DG A 
Sbjct: 241 RGTTTAGNASQVSDGVAG 258

>1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A Length = 393

 Score =  117 bits (295), Expect = 3e-29
 Identities = 30/70 (42%), Positives = 37/70 (52%), Gaps = 1/70 (1%)

Query: 146 KGDVVVAKDEYPKANTTVEALQKLRPVFQKD-GTVTAGNASGINDGAAAVLLMSYKRAQA 204
               +   DE P+ N T E+L  +RP F KD GT TAGNAS ++DG A VLL     A  
Sbjct: 210 PDGSICQSDEGPRPNVTAESLSSIRPAFIKDRGTTTAGNASQVSDGVAGVLLARRSVANQ 269

Query: 205 RNIQPLARIA 214
            N+  L R  
Sbjct: 270 LNLPVLGRYI 279

>2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens} Length = 418

 Score =  290 bits (744), Expect = 1e-94
 Identities = 79/218 (36%), Positives = 116/218 (53%), Gaps = 17/218 (7%)

Query: 214 AIKSGDATAIVAGGQECMSQAPHVIN-IRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGIT 272
            I++G     +A G E MS A            +   + +D +           I MGIT
Sbjct: 130 GIRNGSYDIGMACGVESMSLADRGNPGNITSRLMEKEKARDCL-----------IPMGIT 178

Query: 273 AENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVIS-----TRKGDVVVAK 327
           +EN+A+++ ISR +QD +A  SQ K A+AQ  G F  EIVPV  +       K  + V +
Sbjct: 179 SENVAERFGISREKQDTFALASQQKAARAQSKGCFQAEIVPVTTTVHDDKGTKRSITVTQ 238

Query: 328 DEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARI 387
           DE  + +TT+E L KL+P F+KDG+ TAGN+S ++DGAAA+LL     A+   +  L  +
Sbjct: 239 DEGIRPSTTMEGLAKLKPAFKKDGSTTAGNSSQVSDGAAAILLARRSKAEELGLPILGVL 298

Query: 388 VAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYF 425
            + +  GV P +MG GP  A+   L KAG +  +V  F
Sbjct: 299 RSYAVVGVPPDIMGIGPAYAIPVALQKAGLTVSDVDIF 336

>2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens} Length = 418

 Score =  200 bits (511), Expect = 5e-60
 Identities = 60/215 (27%), Positives = 89/215 (41%), Gaps = 63/215 (29%)

Query: 1   MSQAPHVIN-IRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDE 59
           MS A            +   + +D +           I MGIT+EN+A+++ ISR +QD 
Sbjct: 147 MSLADRGNPGNITSRLMEKEKARDCL-----------IPMGITSENVAERFGISREKQDT 195

Query: 60  YAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTSVDALQKLRPVFQK 119
           +A  SQ K A+AQ  G F  EIVPV  +                                
Sbjct: 196 FALASQQKAARAQSKGCFQAEIVPVTTTVHDDK--------------------------- 228

Query: 120 DGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTV 179
                                     K  + V +DE  + +TT+E L KL+P F+KDG+ 
Sbjct: 229 ------------------------GTKRSITVTQDEGIRPSTTMEGLAKLKPAFKKDGST 264

Query: 180 TAGNASGINDGAAAVLLMSYKRAQARNIQPLARIA 214
           TAGN+S ++DGAAA+LL    +A+   +  L  + 
Sbjct: 265 TAGNSSQVSDGAAAILLARRSKAEELGLPILGVLR 299

>3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium} Length = 387

 Score =  283 bits (726), Expect = 2e-92
 Identities = 77/214 (35%), Positives = 111/214 (51%), Gaps = 14/214 (6%)

Query: 214 AIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITA 273
            I +GDA   + GG E M   P      +G+  +    ++     G         MG+TA
Sbjct: 104 MIMTGDAQVCLVGGVEHMGHVPMS----HGVDFHPGLSRNVAKAAG--------MMGLTA 151

Query: 274 ENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGD-VVVAKDEYPK 332
           E +++   ISR  QD++A +S  +   A + G F  EI+P       G       DE  +
Sbjct: 152 EMLSRLHGISREMQDQFAARSHARAWAATQSGAFKTEIIPTGGHDADGVLKQFNYDEVIR 211

Query: 333 ANTTVEALQKLRPVFQK-DGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMS 391
             TTVEAL  LRP F    GTVTAG +S ++DGAAA+L+MS   A+   ++P ARI +M+
Sbjct: 212 PETTVEALSTLRPAFDPVSGTVTAGTSSALSDGAAAMLVMSESRARELGLKPRARIRSMA 271

Query: 392 SAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYF 425
             G +P++MG GP+PA    L KAG S  ++  F
Sbjct: 272 VVGCDPSIMGYGPVPASKLALKKAGLSASDIDVF 305

>3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium} Length = 387

 Score =  177 bits (451), Expect = 2e-51
 Identities = 45/139 (32%), Positives = 66/139 (47%), Gaps = 14/139 (10%)

Query: 1   MSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEY 60
           M   P      +G+  +    ++     G         MG+TAE +++   ISR  QD++
Sbjct: 121 MGHVPMS----HGVDFHPGLSRNVAKAAG--------MMGLTAEMLSRLHGISREMQDQF 168

Query: 61  AYQSQVKTAKAQEGGYFDEEIVPVVISTRKGD-VVVAKDEYPKANTSVDALQKLRPVFQK 119
           A +S  +   A + G F  EI+P       G       DE  +  T+V+AL  LRP F  
Sbjct: 169 AARSHARAWAATQSGAFKTEIIPTGGHDADGVLKQFNYDEVIRPETTVEALSTLRPAFDP 228

Query: 120 -DGTVTAGNASGINDGAAA 137
             GTVTAG +S ++DGAAA
Sbjct: 229 VSGTVTAGTSSALSDGAAA 247

>3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium} Length = 387

 Score =  113 bits (285), Expect = 6e-28
 Identities = 34/71 (47%), Positives = 43/71 (60%), Gaps = 2/71 (2%)

Query: 145 RKGD-VVVAKDEYPKANTTVEALQKLRPVFQK-DGTVTAGNASGINDGAAAVLLMSYKRA 202
             G       DE  +  TTVEAL  LRP F    GTVTAG +S ++DGAAA+L+MS  RA
Sbjct: 197 ADGVLKQFNYDEVIRPETTVEALSTLRPAFDPVSGTVTAGTSSALSDGAAAMLVMSESRA 256

Query: 203 QARNIQPLARI 213
           +   ++P ARI
Sbjct: 257 RELGLKPRARI 267

>2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A Length = 442

 Score =  279 bits (715), Expect = 5e-90
 Identities = 75/219 (34%), Positives = 118/219 (53%), Gaps = 18/219 (8%)

Query: 214 AIKSGDATAIVAGGQECMSQAPHVIN-IRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGIT 272
           AIK+G     +  G E M+  P       N      A+ ++ +           + MG+T
Sbjct: 131 AIKAGFYDIGIGAGLESMTTNPMAWEGSVNPAVKKFAQAQNCL-----------LPMGVT 179

Query: 273 AENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPV---VISTRKGD---VVVA 326
           +EN+A+++ +SR EQD+ A  S  K A A   G F +EI+PV   ++  + GD   + V+
Sbjct: 180 SENVAQRFGVSRQEQDQAAVDSHRKAAAATAAGKFKDEIIPVKTKLVDPKTGDEKPITVS 239

Query: 327 KDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLAR 386
            D+  +  TT+ +L KL+PVF+KDGT TAGN+S ++DGA AVLLM    A  + +  L  
Sbjct: 240 VDDGIRPTTTLASLGKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMQKGLPVLGV 299

Query: 387 IVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYF 425
               ++ GV+P +MG GP  A+ A +  AG   +++  F
Sbjct: 300 FRTFAAVGVDPAIMGIGPAVAIPAAVKAAGLELDDIDLF 338

>2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A Length = 442

 Score =  187 bits (477), Expect = 8e-55
 Identities = 57/214 (26%), Positives = 87/214 (40%), Gaps = 62/214 (28%)

Query: 1   MSQAPHVIN-IRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDE 59
           M+  P       N      A+ ++ +           + MG+T+EN+A+++ +SR EQD+
Sbjct: 148 MTTNPMAWEGSVNPAVKKFAQAQNCL-----------LPMGVTSENVAQRFGVSRQEQDQ 196

Query: 60  YAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTSVDALQKLRPVFQK 119
            A  S  K A A   G F +EI+PV                                  K
Sbjct: 197 AAVDSHRKAAAATAAGKFKDEIIPVKTKLVD---------------------------PK 229

Query: 120 DGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTV 179
            G                        +  + V+ D+  +  TT+ +L KL+PVF+KDGT 
Sbjct: 230 TG-----------------------DEKPITVSVDDGIRPTTTLASLGKLKPVFKKDGTT 266

Query: 180 TAGNASGINDGAAAVLLMSYKRAQARNIQPLARI 213
           TAGN+S ++DGA AVLLM    A  + +  L   
Sbjct: 267 TAGNSSQVSDGAGAVLLMKRSVAMQKGLPVLGVF 300

>3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium} Length = 407

 Score =  233 bits (596), Expect = 1e-72
 Identities = 78/237 (32%), Positives = 114/237 (48%), Gaps = 42/237 (17%)

Query: 214 AIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEM-KDSMVFDG---LTDAFHNIHM 269
            ++SG    ++AGG E MS+ P               M  D   +            +  
Sbjct: 109 KVRSGWDDLVLAGGVESMSRVP---------------MGSDGGAWATDPETNYRIGFVPQ 153

Query: 270 GITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDE 329
           GI A+ IA     SR + D YA +SQ K A A  GGYF + +VPV    + G V++  DE
Sbjct: 154 GIGADLIATLEGFSREDVDAYALRSQQKAAAAWSGGYFAKSVVPV--RDQNGLVILDHDE 211

Query: 330 YPKANTTVEALQKLRPVFQKDG---------------------TVTAGNASGINDGAAAV 368
           + + +TT+E L KL+  F   G                       T GN+SGI DGAA V
Sbjct: 212 HMRPDTTMEGLAKLKTAFDGVGEMGGFDDVALQKYHWVEKINHVHTGGNSSGIVDGAALV 271

Query: 369 LLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYF 425
           L+ S K  +++ + P ARIVA +++G +P +M TGP PA   VL +AG + +++  F
Sbjct: 272 LVGSEKAGKSQGLTPRARIVATATSGSDPVIMLTGPTPATRKVLDRAGLTIDDIDLF 328

>3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium} Length = 407

 Score =  162 bits (412), Expect = 1e-45
 Identities = 55/177 (31%), Positives = 81/177 (45%), Gaps = 37/177 (20%)

Query: 37  IHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVA 96
           +  GI A+ IA     SR + D YA +SQ K A A  GGYF + +VPV    + G V++ 
Sbjct: 151 VPQGIGADLIATLEGFSREDVDAYALRSQQKAAAAWSGGYFAKSVVPV--RDQNGLVILD 208

Query: 97  KDEYPKANTSVDALQKLRPVFQKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEY 156
            DE+ + +T+++ L KL+  F   G +   +                             
Sbjct: 209 HDEHMRPDTTMEGLAKLKTAFDGVGEMGGFDDV--------------------------- 241

Query: 157 PKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQARNIQPLARI 213
                   ALQK   V + +   T GN+SGI DGAA VL+ S K  +++ + P ARI
Sbjct: 242 --------ALQKYHWVEKINHVHTGGNSSGIVDGAALVLVGSEKAGKSQGLTPRARI 290

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 47.5 bits (112), Expect = 7e-06
 Identities = 63/378 (16%), Positives = 111/378 (29%), Gaps = 118/378 (31%)

Query: 76  YFDEEIVPVVISTRKGDV-----------VVAKDEYPKANTSVDALQKLRPVF------Q 118
           Y  ++I+ V       +            +++K+E      S DA+     +F      Q
Sbjct: 16  YQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQ 75

Query: 119 KD------GTVTAGN----ASGI----NDGAAAGKLYLFTRK---GDVVVAKDEYPKANT 161
           ++        V   N     S I       +   ++Y+  R     D  V    + K N 
Sbjct: 76  EEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQV----FAKYNV 131

Query: 162 T--------VEALQKLRPVFQKDGTVTAGNASGINDG----AAAVLLMSYKRAQARNIQP 209
           +         +AL +LRP       +  G   G   G    A  V L SYK     + + 
Sbjct: 132 SRLQPYLKLRQALLELRPA---KNVLIDGVL-GS--GKTWVALDVCL-SYKVQCKMDFK- 183

Query: 210 LARIA-IKSGDATAIVAGGQECMSQAPHVI-----NIRNGIKLNDAEMKDSMVFDGLTDA 263
              I  +              C S  P  +      +   I  N     D          
Sbjct: 184 ---IFWLNLK----------NCNS--PETVLEMLQKLLYQIDPNWTSRSDHSS------- 221

Query: 264 FHNIHMGITAENIAKKWSISRLEQDEYAYQS------QVKTAKAQEGGYFDEEIVPVVIS 317
             NI + I   +  +   + RL + +  Y++       V+ AKA     F+     ++++
Sbjct: 222 --NIKLRI---HSIQAE-LRRLLKSK-PYENCLLVLLNVQNAKAWN--AFNLS-CKILLT 271

Query: 318 TRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKT-- 375
           TR     V  D    A TT  +L         D   +              L    +   
Sbjct: 272 TR--FKQVT-DFLSAATTTHISLDHHSMTLTPDEVKSL---------LLKYLDCRPQDLP 319

Query: 376 AQARNIQPLARIVAMSSA 393
            +     P    +++ + 
Sbjct: 320 REVLTTNPRR--LSIIAE 335

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	441
4dd5_A	396	Acetyl-COA acetyltransferase; structural genomics,	100.0
1ulq_A	401	Putative acetyl-COA acetyltransferase; structural	100.0
3ss6_A	394	Acetyl-COA acetyltransferase; structural genomics,	100.0
1wl4_A	397	Acetyl-coenzyme A acetyltransferase 2; thiolase fo	100.0
2vu1_A	392	Acetyl-COA acetyltransferase; acyltransferase, PHB	100.0
4e1l_A	395	Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich,	100.0
3goa_A	387	3-ketoacyl-COA thiolase; metabolism, fatty acid, p	100.0
2wu9_A	442	3-ketoacyl-COA thiolase 2, peroxisomal; cysteine o	100.0
1afw_A	393	3-ketoacetyl-COA thiolase; fatty acid metabolism;	100.0
1wdk_C	390	3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrame	100.0
3svk_A	407	Acetyl-COA acetyltransferase; ssgcid, NIH, niaid,	100.0
2iik_A	418	3-ketoacyl-COA thiolase, peroxisomal; fatty acid m	100.0
2ib8_A	395	Acetyl-COA acetyltransferase; thiolase fold, potas	100.0
4egv_A	520	Acetyl-COA acetyltransferase; NEW SUB-family, thio	99.96
4dd5_A	396	Acetyl-COA acetyltransferase; structural genomics,	99.93
3ss6_A	394	Acetyl-COA acetyltransferase; structural genomics,	99.92
1wl4_A	397	Acetyl-coenzyme A acetyltransferase 2; thiolase fo	99.91
4e1l_A	395	Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich,	99.91
2vu1_A	392	Acetyl-COA acetyltransferase; acyltransferase, PHB	99.9
1ulq_A	401	Putative acetyl-COA acetyltransferase; structural	99.9
3goa_A	387	3-ketoacyl-COA thiolase; metabolism, fatty acid, p	99.88
3svk_A	407	Acetyl-COA acetyltransferase; ssgcid, NIH, niaid,	99.85
2wu9_A	442	3-ketoacyl-COA thiolase 2, peroxisomal; cysteine o	99.84
2ib8_A	395	Acetyl-COA acetyltransferase; thiolase fold, potas	99.81
1afw_A	393	3-ketoacetyl-COA thiolase; fatty acid metabolism;	99.8
1wdk_C	390	3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrame	99.79
2iik_A	418	3-ketoacyl-COA thiolase, peroxisomal; fatty acid m	99.79
4egv_A	520	Acetyl-COA acetyltransferase; NEW SUB-family, thio	99.61
4ddo_A	451	3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgci	99.18
3kzu_A	428	3-oxoacyl-(acyl-carrier-protein) synthase II; seat	99.18
2wge_A	416	3-oxoacyl-[acyl-carrier-protein] synthase 1; beta	99.18
3o04_A	413	LMO2201 protein, beta-keto-acyl carrier protein sy	99.1
2gp6_A	434	3-oxoacyl-[acyl-carrier-protein] synthase 2; thiol	99.04
3mqd_A	428	Beta-ketoacyl synthase; ssgcid, ALS collaborative	98.95
2hg4_A	917	DEBS, 6-deoxyerythronolide B synthase; ketosynthas	98.82
1j3n_A	408	3-oxoacyl-(acyl-carrier protein) synthase II; cond	98.74
2iwz_A	438	3-oxoacyl-[acyl-carrier-protein] synthase; mitocho	98.73
2ix4_A	431	3-oxoacyl-[acyl-carrier-protein] synthase; beta-ke	98.71
1e5m_A	416	KAS II, beta ketoacyl acyl carrier protein synthas	98.71
1ox0_A	430	Beta ketoacyl-acyl carrier protein synthase; trans	98.7
3ho9_A	427	3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF,	98.68
1tqy_B	415	Actinorhodin polyketide putative beta-ketoacyl SY;	98.68
2gqd_A	437	3-oxoacyl-[acyl-carrier-protein] synthase 2; dupli	98.66
1tqy_A	424	Beta-ketoacyl synthase/acyl transferase; alpha-bet	98.6
4ewg_A	412	Beta-ketoacyl synthase; ssgcid, structural genomic	98.59
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	98.57
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	98.49
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	98.41
3hhd_A	965	Fatty acid synthase; transferase, multienzyme, meg	98.37
2vba_A	406	3-oxoacyl-[acyl-carrier-protein] synthase 1; cytop	98.32
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	98.31
2qo3_A	915	Eryaii erythromycin polyketide synthase modules 3;	98.24
2ebd_A	309	3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH,	96.65
1u6e_A	335	3-oxoacyl-[acyl-carrier-protein] synthase III; tra	96.35
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	96.06
3tsy_A	979	Fusion protein 4-coumarate--COA ligase 1, resvera	95.98
1zow_A	313	3-oxoacyl-[acyl-carrier-protein] synthase III; FAB	95.96
3lma_A	347	Stage V sporulation protein AD (spovad); NESG, str	95.82
1ub7_A	322	3-oxoacyl-[acyl-carrier protein] synthase; fatty a	95.46
1ted_A	393	PKS18; thiolase fold, substrate binding tunnel, tr	94.78
1hnj_A	317	Beta-ketoacyl-acyl carrier protein synthase III; F	94.18
1u0m_A	382	Putative polyketide synthase; type III polyketide	93.86
2h84_A	374	Steely1; thiolase-fold, type III polyketide syntha	93.58
2x3e_A	331	3-oxoacyl-[acyl-carrier-protein] synthase 3; HED,	93.48
4dfe_A	333	3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgci	92.1
1mzj_A	339	Beta-ketoacylsynthase III; beta-ketosynthase, arom	91.4
1xpm_A	396	3-hydroxy-3-methylglutaryl COA synthase; HMG-COA s	89.7
3il3_A	323	3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH,	85.49
3s21_A	345	3-oxoacyl-[ACP] synthase III; non-decarboxylative	85.21
3led_A	392	3-oxoacyl-acyl carrier protein synthase III; struc	83.47
3s3l_A	357	CERJ; acyltransferase, FABH homologue, KS III homo	80.08

>4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile}

Probab=100.00  E-value=1.3e-39  Score=334.63  Aligned_cols=231  Identities=49%  Similarity=0.733  Sum_probs=204.7

Q ss_pred             chhhHHhhhcCeeEEEEeecccCCCCccchh-cccccccCcccccchhhh-cccccccccchHHHHHHHHHHHhCCCHHH
Q psy4157         209 PLARIAIKSGDATAIVAGGQECMSQAPHVIN-IRNGIKLNDAEMKDSMVF-DGLTDAFHNIHMGITAENIAKKWSISRLE  286 (441)
Q Consensus       209 ~~A~~~I~sG~advvla~G~E~ms~~P~~~~-~r~g~~~g~~~~~~d~~~-~g~~~~~~~~~ma~~Ae~~a~~~Gitre~  286 (441)
                      .+|+.+|++|.++++|++|+|+|+..|+... .+++..+++ ..+.+.+. .++++++.+..|++.|++||++||+|||+
T Consensus       101 ~~A~~~I~~G~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~tre~  179 (396)
T 4dd5_A          101 SMASQLIALGDADIMLVGGAENMSMSPYLVPSARYGARMGD-AAFVDSMIKDGLSDIFNNYHMGITAENIAEQWNITREE  179 (396)
T ss_dssp             HHHHHHHHHTSCSEEEEEEEEESTTCCEECTTTTTCCCSSC-CCCEEHHHHHTSEETTTTEEHHHHHHHHHHHHTCCHHH
T ss_pred             HHHHHHHhcCCCCEEEEEEEecccCCcccccccccccccCc-ccccchhhhcccccccccchHHHHHHHHHHHhCCCHHH
Confidence            3689999999999999999999999998653 455555554 33334332 26667766778999999999999999999


Q ss_pred             HHHHHHHHHHHHHhhhhCCCCCccccceeeecCCCceeEeccCCCCCCCCHHHHhcCCCccccCCccccCCCCCCCCCcE
Q psy4157         287 QDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAA  366 (441)
Q Consensus       287 ld~~A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~g~~~~~~D~~~r~~~t~e~l~~~~~v~~p~G~lt~~n~~~~sDGAA  366 (441)
                      ||+||++||+||.+|++.|+|++||+|++++.++|...++.|+++|+++|+|+|.+++|+|+|+|++|++|||+++|||+
T Consensus       180 ~~~~a~~s~~~a~~a~~~g~f~~ei~pv~~~~~~~~~~~~~d~~~r~~~t~e~l~~~~~v~~p~g~~t~~~~~~~~dGaa  259 (396)
T 4dd5_A          180 QDELALASQNKAEKAQAEGKFDEEIVPVVIKGRKGDTVVDKDEYIKPGTTMEKLAKLRPAFKKDGTVTAGNASGINDGAA  259 (396)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTTTTTBCCEEEC----CEEECSCSCCCTTCCHHHHHHCCBSSSTTCSCBTTTBCCCEEEEE
T ss_pred             HHHHHHHHHHHHHHhHHcCCcccceeeeeeccCCCceeecCcccccCCCCHHHHhhCCCccCCCCCeecCCCCCcCccee
Confidence            99999999999999999999999999999998888888999999999999999999999999999999999999999999


Q ss_pred             EEEEcCHHHHHhcCCCceEEEEEEEeecCCCCcCCCChHHHHHHHHHHcCCCCCCccEEEecCCChhhhhhhhc
Q psy4157         367 AVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATSGGIANRRQE  440 (441)
Q Consensus       367 AvVLaSe~~A~~lg~~p~a~I~~~~~~~~~p~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~~~~~~~  440 (441)
                      +|||++++.|++++.+|+++|++++..+.+|..++.++..+++++|+++||+++|||++|+||+|++....++|
T Consensus       260 avvL~s~~~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId~ve~~d~f~~~~~~~~~  333 (396)
T 4dd5_A          260 MLVVMAKEKAEELGIEPLATIVSYGTAGVDPKIMGYGPVPATKKALEAANMTIEDIDLVEANEAFAAQSVAVIR  333 (396)
T ss_dssp             EEEEEEHHHHHHHTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCSEEEECCSBHHHHHHHHH
T ss_pred             EEEEeeHHHHHHCCCCceEEEEEEEEecCCCCcccHHHHHHHHHHHHHcCCCHHHcCEEEecChHHHHHHHHHH
Confidence            99999999999999999999999999888888888899999999999999999999999999999998877655

>1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1

Probab=100.00  E-value=2e-39  Score=333.65  Aligned_cols=231  Identities=39%  Similarity=0.576  Sum_probs=197.6

Q ss_pred             chhhHHhhhcCeeEEEEeecccCCCCccchh-cccccccCcccccchhh----h-cccc-cccccchHHHHHHHHHHHhC
Q psy4157         209 PLARIAIKSGDATAIVAGGQECMSQAPHVIN-IRNGIKLNDAEMKDSMV----F-DGLT-DAFHNIHMGITAENIAKKWS  281 (441)
Q Consensus       209 ~~A~~~I~sG~advvla~G~E~ms~~P~~~~-~r~g~~~g~~~~~~d~~----~-~g~~-~~~~~~~ma~~Ae~~a~~~G  281 (441)
                      .+|+.+|++|++|++|++|+|+|+..|.... .+++..++. ..+.+.+    . .++. +.+....|++.|++||++||
T Consensus        97 ~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~p~~~~~~~~~~~a~~~~~~~g  175 (401)
T 1ulq_A           97 AQAARAIWAGEGKVYIGSGVESMSRAPYAVPKPERGFPTGN-LVMYDTTLGWRFVNPKMQALYGTESMGETAENLAEMYG  175 (401)
T ss_dssp             HHHHHHHHTTSCSEEEEEEEEESSSCCEEECCCCSSSCCSC-EEEEETTSSCCSCCHHHHHHSCCCCHHHHHHHHHHHHT
T ss_pred             HHHHHHHHCCCCCEEEEEEEeecCCCcccccccccccccCc-ccccchhhhccccccccccccccchHHHHHHHHHHHhC
Confidence            3789999999999999999999999887432 223322221 1111110    0 1221 11123458999999999999


Q ss_pred             CCHHHHHHHHHHHHHHHHhhhhCCCCCccccceeeecCCCceeEeccCCCCCCCCHHHHhcCCCccccCCccccCCCCCC
Q psy4157         282 ISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGI  361 (441)
Q Consensus       282 itre~ld~~A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~g~~~~~~D~~~r~~~t~e~l~~~~~v~~p~G~lt~~n~~~~  361 (441)
                      +|||++|+||++||++|.++++.|+|++||+|+++++++|.+++++|+++|+++|+|+|.++||+|+++|++|++|||++
T Consensus       176 ~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~P~~~~~~~~~~~~~~d~~~r~~~t~e~~~~~rpif~~~G~vt~~~~~~~  255 (401)
T 1ulq_A          176 IRREEQDRFALLSHQKAVRAWEEGRFQDEVVPVPVKRGKEEILVEQDEGPRRDTSLEKLAALRPVFREGGTVTAGNSSPL  255 (401)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEETTEEEEECSCSCCCTTCCHHHHHHSCBSSSTTCSCBGGGBCCC
T ss_pred             CCHHHHHHHHHHHHHHHHhhhhcCCcccceeceeecCCCCceeeccccccCCCCCHHHHhhCCCccCCCCCeechhcCCc
Confidence            99999999999999999988999999999999999888777788999999999999999999999998899999999999


Q ss_pred             CCCcEEEEEcCHHHHHhcCCCceEEEEEEEeecCCCCcCCCChHHHHHHHHHHcCCCCCCccEEEecCCChhhhhhhhc
Q psy4157         362 NDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATSGGIANRRQE  440 (441)
Q Consensus       362 sDGAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~~p~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~~~~~~~  440 (441)
                      +|||++|||+|++.|++++.+|+++|++++..+++|..++.++..|++++|+++||+++|||+||+||+|++.+..++|
T Consensus       256 ~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId~ie~heafa~~~l~~~~  334 (401)
T 1ulq_A          256 NDGAAAVLLVSDDYAKAHGLRPLARVRAIAVAGVPPRIMGIGPVPATRKALERAGLSFSDLGLIELNEAFAAQALAVLR  334 (401)
T ss_dssp             EEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHTTCCGGGCSEEEECCSBHHHHHHHHH
T ss_pred             cchheEEEEecHHHHHHcCCCceEEEEEEEEecCCccccchhHHHHHHHHHHHcCCCHHHcCEEEEecchHHHHHHHHH
Confidence            9999999999999999999999999999999998888888899999999999999999999999999999998887665

>3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis}

Probab=100.00  E-value=3.7e-39  Score=331.01  Aligned_cols=231  Identities=43%  Similarity=0.675  Sum_probs=207.8

Q ss_pred             chhhHHhhhcCeeEEEEeecccCCCCccchh-cccccccCcccccchhhhcccccccccchHHHHHHHHHHHhCCCHHHH
Q psy4157         209 PLARIAIKSGDATAIVAGGQECMSQAPHVIN-IRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQ  287 (441)
Q Consensus       209 ~~A~~~I~sG~advvla~G~E~ms~~P~~~~-~r~g~~~g~~~~~~d~~~~g~~~~~~~~~ma~~Ae~~a~~~Gitre~l  287 (441)
                      .+|+.+|++|++|++|++|+|+|+..|.... .+++..+++ ..+.+.+..++++++....|++.|++||++||++||+|
T Consensus        99 ~~A~~~I~~G~~~~vlv~G~e~~s~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~tre~~  177 (394)
T 3ss6_A           99 MSAAMQIQLGVSEVVVAGGVEAMSSSPYALKQHRWGQRLQH-GEIRDTVWEVLEDPIHHIMMGETAENLVEQYEITREEQ  177 (394)
T ss_dssp             HHHHHHHHHTSCSEEEEEEEEECTTCCEEESSTTTCCCSSC-CCCEEHHHHHTBCTTTCCBHHHHHHHHHHHHTCCHHHH
T ss_pred             HHHHHHHhCCCCCEEEEEEEhhccCCcccccccccccccCC-cccccccccccccccccchHHHHHHHHHHHhCCCHHHH
Confidence            3689999999999999999999999988543 455544544 33334433455666667789999999999999999999


Q ss_pred             HHHHHHHHHHHHhhhhCCCCCccccceeeecCCCceeEeccCCCCCCCCHHHHhcCCCccccCCccccCCCCCCCCCcEE
Q psy4157         288 DEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAA  367 (441)
Q Consensus       288 d~~A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~g~~~~~~D~~~r~~~t~e~l~~~~~v~~p~G~lt~~n~~~~sDGAAA  367 (441)
                      |+||++||++|.+|++.|+|++||+|++++.++|...+++|+++|+++|+|++.+++|+|+|+|++|++|||+++|||++
T Consensus       178 ~~~a~~s~~~A~~a~~ag~f~~ei~p~~~~~~~~~~~~~~d~~~R~~~t~e~~~~~~pvf~~~g~~t~~~~~~~~dGaaa  257 (394)
T 3ss6_A          178 DEVALRSHTLALKAIESGYFDDQIVPITIKERRKEVVFSKDEHPRADITAEKLAGLKPAFRKDGSVTAGNASGLNDGSAV  257 (394)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTTTTBCCEEEECSSCEEEECSCCCCCTTCCHHHHHTCCBSSSTTCCCBSTTBCCCEEEEEE
T ss_pred             HHHHHHHHHHHHHhHhcCCccceeEeEEeccCCCceeecccccccCCCCHHHHhhCCCccCCCCceecCccCCcccceeE
Confidence            99999999999999999999999999999999888789999999999999999999999999999999999999999999


Q ss_pred             EEEcCHHHHHhcCCCceEEEEEEEeecCCCCcCCCChHHHHHHHHHHcCCCCCCccEEEecCCChhhhhhhhc
Q psy4157         368 VLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATSGGIANRRQE  440 (441)
Q Consensus       368 vVLaSe~~A~~lg~~p~a~I~~~~~~~~~p~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~~~~~~~  440 (441)
                      +||++++.|++++.+|+++|.+++..+.+|..++.++..+++++|+++|++++|||++|+||+|++......|
T Consensus       258 vvL~~~~~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dId~ve~~d~fa~~~~~~~~  330 (394)
T 3ss6_A          258 LVLMSEEKAKEKGLQPLARIVGYSVAGVDPKIMGIGPAPAIRKGLEKVDWSLEDADLLEINEAFAAQYLAVEK  330 (394)
T ss_dssp             EEEEEHHHHHHHTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCSEEEECCSBHHHHHHHHH
T ss_pred             EEeccHHHHHHCCCCceEEEEEEEEecCCCccchHHHHHHHHHHHHHcCCCHHHcCEEEeCCchHHHHHHHHH
Confidence            9999999999999999999999999888888888899999999999999999999999999999998877655

>1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A

Probab=100.00  E-value=4.4e-39  Score=330.75  Aligned_cols=231  Identities=52%  Similarity=0.808  Sum_probs=199.2

Q ss_pred             chhhHHhhhcCeeEEEEeecccCCCCccchhcccccccCcccccchhh-hcccccccccchHHHHHHHHHHHhCCCHHHH
Q psy4157         209 PLARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMV-FDGLTDAFHNIHMGITAENIAKKWSISRLEQ  287 (441)
Q Consensus       209 ~~A~~~I~sG~advvla~G~E~ms~~P~~~~~r~g~~~g~~~~~~d~~-~~g~~~~~~~~~ma~~Ae~~a~~~Gitre~l  287 (441)
                      .+|+..|++|++|++|++|+|+|+..|.....+++..+++ ..+.+.. ..++++++....|++.+++||++||+|||+|
T Consensus       100 ~~A~~~I~~G~~d~vlagG~e~~s~~p~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~g~~a~~~~~~~g~tre~~  178 (397)
T 1wl4_A          100 CLAVQSIGIGDSSIVVAGGMENMSKAPHLAYLRTGVKIGE-MPLTDSILCDGLTDAFHNCHMGITAENVAKKWQVSREDQ  178 (397)
T ss_dssp             HHHHHHHHTTSCSEEEEEEEEESTTCCEECCCSSCCSSSC-CCCEEHHHHHTTBCTTTCCBHHHHHHHHHHHTTCCHHHH
T ss_pred             HHHHHHHHCCCCCEEEEEEEeecCCCccccccccccccCc-ccccchhccccccCccccchHHHHHHHHHHHhCcCHHHH
Confidence            3789999999999999999999998886432223322222 1112221 1245554444679999999999999999999


Q ss_pred             HHHHHHHHHHHHhhhhCCCCCccccceeeecCCCceeEeccCCCCCCCCHHHHhcCCCccccC--CccccCCCCCCCCCc
Q psy4157         288 DEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKD--GTVTAGNASGINDGA  365 (441)
Q Consensus       288 d~~A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~g~~~~~~D~~~r~~~t~e~l~~~~~v~~p~--G~lt~~n~~~~sDGA  365 (441)
                      |+||++||+||.+|++.|+|++||+|++++.++|.+.+++|+++|+++|+|+|++++|+|+|+  |++|++|||+++|||
T Consensus       179 ~~~a~~s~~~A~~a~~~g~~~~ei~pv~~~~~~~~~~~~~d~~~r~~~t~e~~~~~rpvfd~~~~G~vt~~~~s~~~dGA  258 (397)
T 1wl4_A          179 DKVAVLSQNRTENAQKAGHFDKEIVPVLVSTRKGLIEVKTDEFPRHGSNIEAMSKLKPYFLTDGTGTVTPANASGINDGA  258 (397)
T ss_dssp             HHHHHHHHHHHHHHHHTTTTTTTBCCEEEEETTEEEEECSCSCCCTTCCHHHHHTSCCSSCCSSCCCCCTTSBCCCEEEE
T ss_pred             HHHHHHHHHHHHhhHhcCCcccceeeeeeccCCCceeeccccccCCCCCHHHHhcCCCccCCCCCCCEechhcCCccchh
Confidence            999999999999999999999999999998887777788999999999999999999999886  899999999999999


Q ss_pred             EEEEEcCHHHHHhcCCCceEEEEEEEeecCCCCcCCCChHHHHHHHHHHcCCCCCCccEEEecCCChhhhhhhhc
Q psy4157         366 AAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATSGGIANRRQE  440 (441)
Q Consensus       366 AAvVLaSe~~A~~lg~~p~a~I~~~~~~~~~p~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~~~~~~~  440 (441)
                      +||||+|++.|++++.+|+++|++++..+..|..+..++..|++++|+++||+++|||+||+||+|++.+..++|
T Consensus       259 aavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId~ie~~d~f~~~~l~~~~  333 (397)
T 1wl4_A          259 AAVVLMKKSEADKRGLTPLARIVSWSQVGVEPSIMGIGPIPAIKQAVTKAGWSLEDVDIFEINEAFAAVSAAIVK  333 (397)
T ss_dssp             EEEEEEEHHHHHHTTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCCEEEECCSBHHHHHHHHH
T ss_pred             heeeEecHHHHHHcCCCccEEEEEEEEeecChhhccchHHHHHHHHHHHcCCCHHHCCEEEEecccHHHHHHHHH
Confidence            999999999999999999999999999988888888899999999999999999999999999999987755443

>2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ...

Probab=100.00  E-value=2.4e-38  Score=324.70  Aligned_cols=231  Identities=49%  Similarity=0.775  Sum_probs=197.8

Q ss_pred             chhhHHhhhcCeeEEEEeecccCCCCccchhcccccccCcccccchhhh-cccccccccchHHHHHHHHHHHhCCCHHHH
Q psy4157         209 PLARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVF-DGLTDAFHNIHMGITAENIAKKWSISRLEQ  287 (441)
Q Consensus       209 ~~A~~~I~sG~advvla~G~E~ms~~P~~~~~r~g~~~g~~~~~~d~~~-~g~~~~~~~~~ma~~Ae~~a~~~Gitre~l  287 (441)
                      .+|+.+|++|++|++|++|+|+|+..|.....+++..++. ....+.++ .++.+++....|++.+++||++||+|||++
T Consensus        97 ~~A~~~I~~G~~d~vlvgG~e~~s~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~s~e~~  175 (392)
T 2vu1_A           97 ALGMQQIATGDASIIVAGGMESMSMAPHCAHLRGGVKMGD-FKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRDEQ  175 (392)
T ss_dssp             HHHHHHHHTTSCSCEEEEEEEESTTCCEEECCTTCCCSSC-EEEEEHHHHHHTBCTTTCCBHHHHHHHHHHHHTCCHHHH
T ss_pred             HHHHHHHHCCCCCEEEEEEEeccCCCccccccccccccCc-ccccchhhhcccccccccchHHHHHHHHHHHhCCCHHHH
Confidence            3689999999999999999999998886300112222211 01112111 134444444579999999999999999999


Q ss_pred             HHHHHHHHHHHHhhhhCCCCCccccceeeecCCCceeEeccCCCCCCCCHHHHhcCCCccccCCccccCCCCCCCCCcEE
Q psy4157         288 DEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAA  367 (441)
Q Consensus       288 d~~A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~g~~~~~~D~~~r~~~t~e~l~~~~~v~~p~G~lt~~n~~~~sDGAAA  367 (441)
                      |+||++||++|.+|++.|+|++||+|++++.++|...++.|+++|+++|+|+|+++||+++++|++|++|||+++|||+|
T Consensus       176 ~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~f~~d~~~r~~~t~e~~~~~~~v~~~~g~vt~~~~~~~~dGAaa  255 (392)
T 2vu1_A          176 DAFAVASQNKAEAAQKDGRFKDEIVPFIVKGRKGDITVDADEYIRHGATLDSMAKLRPAFDKEGTVTAGNASGLNDGAAA  255 (392)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTTTTBCCEEECCTTCCEEECSCSSCCTTCCHHHHHTCCCSSCTTCCCCSSSBCCCEEEEEE
T ss_pred             HHHHHHHHHHHHHhHhcCCccceeeeeeeccCCCceeeccccccCCCCCHHHHhcCCCccCCCCCeeCcccCCccChhhe
Confidence            99999999999999999999999999998877777778999999999999999999999988899999999999999999


Q ss_pred             EEEcCHHHHHhcCCCceEEEEEEEeecCCCCcCCCChHHHHHHHHHHcCCCCCCccEEEecCCChhhhhhhhc
Q psy4157         368 VLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATSGGIANRRQE  440 (441)
Q Consensus       368 vVLaSe~~A~~lg~~p~a~I~~~~~~~~~p~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~~~~~~~  440 (441)
                      |||+|++.|++++.+|+++|++++..+..|..+..++..|++++|+++||+++|||+||+||+|++.+..++|
T Consensus       256 vvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dId~ie~~d~f~~~~l~~~~  328 (392)
T 2vu1_A          256 ALLMSEAEASRRGIQPLGRIVSWATVGVDPKVMGTGPIPASRKALERAGWKIGDLDLVEANEAFAAQACAVNK  328 (392)
T ss_dssp             EEEEEHHHHHHHTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCSEEEECCSBHHHHHHHHH
T ss_pred             eeEecHHHHHhcCCCccEEEEEEEEeecChhhcchhHHHHHHHHHHHcCCCHHHcCEEEeccccHHHHHHHHH
Confidence            9999999999999999999999999988888888899999999999999999999999999999998865544

>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile}

Probab=100.00  E-value=3.1e-38  Score=324.12  Aligned_cols=231  Identities=48%  Similarity=0.702  Sum_probs=203.2

Q ss_pred             chhhHHhhhcCeeEEEEeecccCCCCccchh-cccccccCcccccchhhh-cccccccccchHHHHHHHHHHHhCCCHHH
Q psy4157         209 PLARIAIKSGDATAIVAGGQECMSQAPHVIN-IRNGIKLNDAEMKDSMVF-DGLTDAFHNIHMGITAENIAKKWSISRLE  286 (441)
Q Consensus       209 ~~A~~~I~sG~advvla~G~E~ms~~P~~~~-~r~g~~~g~~~~~~d~~~-~g~~~~~~~~~ma~~Ae~~a~~~Gitre~  286 (441)
                      .+|+.+|.+|.++++|++|+|+|+..|+... .+++..+++ ..+.+.+. .++++++....|++.+++|+++||++||+
T Consensus        99 ~~A~~~I~~G~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~tre~  177 (395)
T 4e1l_A           99 QLAAQSITSGENDVVIAGGTENMSQAPYIVPTARFGSKMGN-ITMVDSMLTDGLIDAFNQYHMGITAENIATKFEFTREM  177 (395)
T ss_dssp             HHHHHHHHTTSCSEEEEEEEEETTTHHHHSBHHHHEEESCC-C------CCTTEEEETTHHHHHHHHHHHHHHHTCCHHH
T ss_pred             HHHHHHHhCCCCCEEEEEEEecccCCcccccccccccccCc-cccchhhcccccccccccchHHHHHHHHHHHhCCCHHH
Confidence            3689999999999999999999999887542 344444443 23333332 25566666678999999999999999999


Q ss_pred             HHHHHHHHHHHHHhhhhCCCCCccccceeeecCCCc-eeEeccCCCCCCCCHHHHhcCCCccccCCccccCCCCCCCCCc
Q psy4157         287 QDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGD-VVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGA  365 (441)
Q Consensus       287 ld~~A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~g~-~~~~~D~~~r~~~t~e~l~~~~~v~~p~G~lt~~n~~~~sDGA  365 (441)
                      +|+|+++||++|.+|+++|+|++||+|++++.++|. +.+++|+++|+++|+|+|.+++|+|+|+|++|++|||+++|||
T Consensus       178 ~~~~a~~s~~~a~~a~~~g~~~~ei~pv~~~~~~g~~~~~~~d~~~r~~~t~e~l~~~~~v~~~~g~~t~~~~~~~~dGa  257 (395)
T 4e1l_A          178 QDKLALESQNKAENAIKNNRFKEEIVPVDVLIRRGKIETIDKDEYPKLGMTFEGLSKLKPAFKKDGTVTAGNASGINDGA  257 (395)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEEETTEEEEECSCSCCCTTCCHHHHHHCCBSSSTTCSCBTTSBCCCEEEE
T ss_pred             HHHHHHHHHHHHHHHHHcCCcccceeeeEeccCCCcceEECCccccCCCCCHHHHhhCCCccCCCCCeeCCcCCCccceE
Confidence            999999999999999999999999999999888775 5789999999999999999999999999999999999999999


Q ss_pred             EEEEEcCHHHHHhcCCCceEEEEEEEeecCCCCcCCCChHHHHHHHHHHcCCCCCCccEEEecCCChhhhhhhhc
Q psy4157         366 AAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATSGGIANRRQE  440 (441)
Q Consensus       366 AAvVLaSe~~A~~lg~~p~a~I~~~~~~~~~p~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~~~~~~~  440 (441)
                      +++||++++.|++++.+|+++|.+++....+|..++.++..+++++|+++||+++|||++|+||+|++....+.|
T Consensus       258 aavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~ai~~al~~agl~~~dId~ve~~d~fa~~~~~~~~  332 (395)
T 4e1l_A          258 AMLILMSQQKADELGIRPLAKIKSYASAGVEPEVMGTGPIPATRKALKKAGLSINDIDLIEANEAFAAQALAVKN  332 (395)
T ss_dssp             EEEEEEEHHHHHHHTCCCSEEEEEEEEEECCGGGTTCTHHHHHHHHHHHTTCCGGGCSEEEECCSBHHHHHHHHH
T ss_pred             EEEEEecHHHHHHCCCCeEEEEEEEEEccCCCCcchHHHHHHHHHHHHHcCCCHHHcCEEEecChhHHHHHHHHH
Confidence            999999999999999999999999999888898888899999999999999999999999999999998877665

>3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium}

Probab=100.00  E-value=1e-37  Score=319.57  Aligned_cols=220  Identities=35%  Similarity=0.468  Sum_probs=194.9

Q ss_pred             chhhHHhhhcCeeEEEEeecccCCCCccchhcccccccCcccccchhhhcccccccccchHHHHHHHHHHHhCCCHHHHH
Q psy4157         209 PLARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQD  288 (441)
Q Consensus       209 ~~A~~~I~sG~advvla~G~E~ms~~P~~~~~r~g~~~g~~~~~~d~~~~g~~~~~~~~~ma~~Ae~~a~~~Gitre~ld  288 (441)
                      .+|+++|++|++|++|++|+|+|+..|+...  .+  +.      + .+..+++++ ...|++.+++||++||++||+||
T Consensus        99 ~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~--~~--~~------~-~~~~~~~~~-~~~~g~~a~~~~~~~g~tre~~~  166 (387)
T 3goa_A           99 HDAARMIMTGDAQVCLVGGVEHMGHVPMSHG--VD--FH------P-GLSRNVAKA-AGMMGLTAEMLSRLHGISREMQD  166 (387)
T ss_dssp             HHHHHHHHTTSCSEEEEEEEECTTTSCTTTT--BC--CC------T-TCC--------CCCHHHHHHHHHHTTCCHHHHH
T ss_pred             HHHHHHHhCCCCCEEEEEEEecCCCCccccc--cC--cC------c-ccccccccc-cccHHHHHHHHHHHhCCCHHHHH
Confidence            3789999999999999999999999987521  11  10      1 112233333 56789999999999999999999


Q ss_pred             HHHHHHHHHHHhhhhCCCCCccccceeeecCCCc-eeEeccCCCCCCCCHHHHhcCCCcccc-CCccccCCCCCCCCCcE
Q psy4157         289 EYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGD-VVVAKDEYPKANTTVEALQKLRPVFQK-DGTVTAGNASGINDGAA  366 (441)
Q Consensus       289 ~~A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~g~-~~~~~D~~~r~~~t~e~l~~~~~v~~p-~G~lt~~n~~~~sDGAA  366 (441)
                      +||++||+||.+|+++|+|++||+|++++.++|+ ..++.|+++|+++|+|+|.+++|+|+| +|++|++|||+++|||+
T Consensus       167 ~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~~~~~~~~~~d~~~r~~~t~e~l~~~~p~f~~~~g~~t~~~~~~~~dGaa  246 (387)
T 3goa_A          167 QFAARSHARAWAATQSGAFKTEIIPTGGHDADGVLKQFNYDEVIRPETTVEALSTLRPAFDPVSGTVTAGTSSALSDGAA  246 (387)
T ss_dssp             HHHHHHHHHHHHHHHHTTTTTTBCCEEEECTTSCEEEECSCTTCCTTCCHHHHTTSCCSSCTTTCCCCGGGBCCCEEEEE
T ss_pred             HHHHHHHHHHHHhHhcCCcccceeeeeeccccCcccccccccccCCCCCHHHHhcCCCcccCCCCceecccCCCcCccEE
Confidence            9999999999999999999999999999988876 678999999999999999999999999 99999999999999999


Q ss_pred             EEEEcCHHHHHhcCCCceEEEEEEEeecCCCCcCCCChHHHHHHHHHHcCCCCCCccEEEecCCChhhhhhhhc
Q psy4157         367 AVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATSGGIANRRQE  440 (441)
Q Consensus       367 AvVLaSe~~A~~lg~~p~a~I~~~~~~~~~p~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~~~~~~~  440 (441)
                      ++||+|++.|++++.+|+++|++++..++.|..+..++..+++++|+++||+++|||++|+||+|++....++|
T Consensus       247 avvL~s~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~did~ve~h~~f~~~~~~~~~  320 (387)
T 3goa_A          247 AMLVMSESRARELGLKPRARIRSMAVVGCDPSIMGYGPVPASKLALKKAGLSASDIDVFEMNEAFAAQILPCIK  320 (387)
T ss_dssp             EEEEEEHHHHHHTTCCCCEEEEEEEEEECCTTSTTCTHHHHHHHHHHHHTCCGGGCSEEEECCSBHHHHHHHHH
T ss_pred             EEEEecHHHHHHcCCCccEEEEEEEEcCCCCCcchHHHHHHHHHHHHHcCCCHHHcCEEEEeCcchHHHHHHHH
Confidence            99999999999999999999999999999999888999999999999999999999999999999998877665

>2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A

Probab=100.00  E-value=7.1e-38  Score=325.86  Aligned_cols=221  Identities=33%  Similarity=0.477  Sum_probs=191.2

Q ss_pred             chhhHHhhhcCeeEEEEeecccCCCCccchhcccccccCcccccchhhhc-ccccccccchHHHHHHHHHHHhCCCHHHH
Q psy4157         209 PLARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFD-GLTDAFHNIHMGITAENIAKKWSISRLEQ  287 (441)
Q Consensus       209 ~~A~~~I~sG~advvla~G~E~ms~~P~~~~~r~g~~~g~~~~~~d~~~~-g~~~~~~~~~ma~~Ae~~a~~~Gitre~l  287 (441)
                      .+|+.+|++|++|++|++|+|+|+..|....   .       ...++++. ++ +++....|++.+++||++||++||+|
T Consensus       126 ~~A~~~I~sG~~d~vLvgG~e~~s~~p~~~~---~-------~~~~~~~~~~~-~~~~~~~mg~~A~~~~~~~gisre~~  194 (442)
T 2wu9_A          126 ADVAAAIKAGFYDIGIGAGLESMTTNPMAWE---G-------SVNPAVKKFAQ-AQNCLLPMGVTSENVAQRFGVSRQEQ  194 (442)
T ss_dssp             HHHHHHHHTTSCSEEEEEEEEETTTSCCCCC---S-------CCCGGGGGCHH-HHHTTSCHHHHHHHHHHHHTCCHHHH
T ss_pred             HHHHHHHHCCCCCEEEEEEEeecCCCccccc---c-------ccchhhhhccc-cccchhHHHHHHHHHHHHhCCCHHHH
Confidence            3789999999999999999999998876321   0       00011110 11 22233579999999999999999999


Q ss_pred             HHHHHHHHHHHHhhhhCCCCCccccceeeecCC------CceeEeccCCCCCCCCHHHHhcCCCccccCCccccCCCCCC
Q psy4157         288 DEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRK------GDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGI  361 (441)
Q Consensus       288 d~~A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~------g~~~~~~D~~~r~~~t~e~l~~~~~v~~p~G~lt~~n~~~~  361 (441)
                      |+||++||++|.++.+.|+|++||+|++++.++      |..+++.|+++|+++|+|+|+++||+|+++|++|++|||++
T Consensus       195 ~~~A~~s~~~A~~~p~ag~~~~ei~pv~~~~~~~~~~~~~~~~~~~De~~r~~~t~e~~~~~rpvfd~~G~vt~~n~s~~  274 (442)
T 2wu9_A          195 DQAAVDSHRKAAAATAAGKFKDEIIPVKTKLVDPKTGDEKPITVSVDDGIRPTTTLASLGKLKPVFKKDGTTTAGNSSQV  274 (442)
T ss_dssp             HHHHHHHHHHHHHHHHTTTTTTTBCCEEEEEECTTTCCEEEEEECSCTTCCTTCCHHHHHTSCCSSCTTCCCCGGGBCCC
T ss_pred             HHHHHHHHHHHHhChhcccccccccceeeccccccccccCceeeecccCcCCCCCHHHHhcCCCccCCCCCeechhcCCC
Confidence            999999999999888889999999999885221      34678999999999999999999999998899999999999


Q ss_pred             CCCcEEEEEcCHHHHHhcCCCceEEEEEEEeecCCCCcCCCChHHHHHHHHHHcCCCCCCccEEEecCCChhhhhhhhc
Q psy4157         362 NDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATSGGIANRRQE  440 (441)
Q Consensus       362 sDGAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~~p~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~~~~~~~  440 (441)
                      +|||+||||+|++.|++++.+|+++|++++..+++|..++.++..|++++|++|||+++|||+||+||+||+....++|
T Consensus       275 ~DGAaavvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~A~~~Al~~AGl~~~DId~iE~h~aft~~~l~~~~  353 (442)
T 2wu9_A          275 SDGAGAVLLMKRSVAMQKGLPVLGVFRTFAAVGVDPAIMGIGPAVAIPAAVKAAGLELDDIDLFEINEAFASQFVYCRN  353 (442)
T ss_dssp             EEEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCGGGGGGHHHHHHHHHHHHTTCCGGGCCEEEECCSBHHHHHHHHH
T ss_pred             CCceEEEEEeeHHHHHHcCCCceEEEEEEEEecCCchhcchHHHHHHHHHHHHcCCCHHHCCEEEEeCCChHHHHHHHH
Confidence            9999999999999999999999999999999988888888889999999999999999999999999999998877664

>1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A

Probab=100.00  E-value=6.7e-37  Score=314.18  Aligned_cols=221  Identities=34%  Similarity=0.467  Sum_probs=188.6

Q ss_pred             chhhHHhhhcCeeEEEEeecccCCCCccchhcccccccCcccccchhhh-cccccccccchHHHHHHHHHHHhCCCHHHH
Q psy4157         209 PLARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVF-DGLTDAFHNIHMGITAENIAKKWSISRLEQ  287 (441)
Q Consensus       209 ~~A~~~I~sG~advvla~G~E~ms~~P~~~~~r~g~~~g~~~~~~d~~~-~g~~~~~~~~~ma~~Ae~~a~~~Gitre~l  287 (441)
                      .+|+.+|++|++|++|++|+|.|+..|.....  +...     ..+.+. .++ .+.....|++.+++|+++||++||+|
T Consensus       109 ~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~--~~~~-----~~~~~~~~g~-~~~~~~~~~~~a~~~~~~~g~sre~~  180 (393)
T 1afw_A          109 NDIANKIKVGQIDIGLALGVESMTNNYKNVNP--LGMI-----SSEELQKNRE-AKKCLIPMGITNENVAANFKISRKDQ  180 (393)
T ss_dssp             HHHHHHHHTTSCSEEEEEEEEEHHHHGGGSCT--TCSC-----CCHHHHHCTT-GGGGGSCHHHHHHHHHHHTTCCHHHH
T ss_pred             HHHHHHHHCCCCCEEEEEEEEecCCCcccccc--cccc-----cchhhhhccc-ccccchhHHHHHHHHHHHhCcCHHHH
Confidence            36899999999999999999999877663210  0000     001111 133 22223568999999999999999999


Q ss_pred             HHHHHHHHHHHHhhhhCCCCCccccceeeecCCCceeEeccCCCCCCCCHHHHhcCCCccccC-CccccCCCCCCCCCcE
Q psy4157         288 DEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKD-GTVTAGNASGINDGAA  366 (441)
Q Consensus       288 d~~A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~g~~~~~~D~~~r~~~t~e~l~~~~~v~~p~-G~lt~~n~~~~sDGAA  366 (441)
                      |+||++||++|.++++.|+|++||+|++++.  |. .+++|+++|+++|+|+|+++||+|+++ |++|++|||+++|||+
T Consensus       181 ~~~a~~s~~~A~~~~~ag~f~~ei~P~~~~~--~~-~~~~d~~~r~~~t~e~~~~~rpvf~~~~G~vt~~~~~~~~dGAa  257 (393)
T 1afw_A          181 DEFAANSYQKAYKAKNEGLFEDEILPIKLPD--GS-ICQSDEGPRPNVTAESLSSIRPAFIKDRGTTTAGNASQVSDGVA  257 (393)
T ss_dssp             HHHHHHHHHHHHHHHHTTSSTTTBCCEECTT--SC-EECSCSSCCSCCCHHHHHHCCBSCC---CCCBTTTBCCBEEEEE
T ss_pred             HHHHHHHHHHHHhhHhcCCccceeeeeeccC--Cc-eeccccccCCCCCHHHHhcCCCcccCCCCCeechhcCcccchhh
Confidence            9999999999999999999999999998765  34 789999999999999999999999877 8999999999999999


Q ss_pred             EEEEcCHHHHHhcCCCceEEEEEEEeecCCCCcCCCChHHHHHHHHHHcCCCCCCccEEEecCCChhhhhhhhc
Q psy4157         367 AVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATSGGIANRRQE  440 (441)
Q Consensus       367 AvVLaSe~~A~~lg~~p~a~I~~~~~~~~~p~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~~~~~~~  440 (441)
                      +|||+|++.|++++.+|+++|++++..+++|..++.++..|++++|+++||+++|||++|+||+|++....++|
T Consensus       258 avvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId~ve~h~~ft~~~l~~~~  331 (393)
T 1afw_A          258 GVLLARRSVANQLNLPVLGRYIDFQTVGVPPEIMGVGPAYAIPKVLEATGLQVQDIDIFEINEAFAAQALYCIH  331 (393)
T ss_dssp             EEEEEEHHHHHHTTCCCCEEEEEEEEEECCGGGGGGHHHHHHHHHHHHHTCCGGGCSEEEECCSBHHHHHHHHH
T ss_pred             eeeEecHHHHHHcCCCccEEEEEEEEeccChhhcchhHHHHHHHHHHHcCCCHHHCCEEEEeccCHHHHHHHHH
Confidence            99999999999999999999999999998888888889999999999999999999999999999998877654

>1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C*

Probab=100.00  E-value=3.2e-36  Score=308.73  Aligned_cols=220  Identities=33%  Similarity=0.467  Sum_probs=191.1

Q ss_pred             chhhHHhhhcCeeEEEEeecccCCCCccchhcccccccCcccccchhhhcccccccccchHHHHHHHHHHHhCCCHHHHH
Q psy4157         209 PLARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQD  288 (441)
Q Consensus       209 ~~A~~~I~sG~advvla~G~E~ms~~P~~~~~r~g~~~g~~~~~~d~~~~g~~~~~~~~~ma~~Ae~~a~~~Gitre~ld  288 (441)
                      .+|+..|++|++|++|++|+|.|+..|.... .    +.+ ..+..   ++   +.....|++.|++||++||++++++|
T Consensus       102 ~~A~~~I~~G~~d~vlvgG~e~~s~~p~~~~-~----~~~-~~~~~---~~---~~~~~~~g~~a~~~~~~~g~s~e~~~  169 (390)
T 1wdk_C          102 HTAAQAIMTGNGDVFVVGGVEHMGHVSMMHG-V----DPN-PHMSL---YA---AKASGMMGLTAEMLGKMHGISREQQD  169 (390)
T ss_dssp             HHHHHHHHTTSCSEEEEEEEEETTTSCTTTT-B----CCC-GGGGG---TS---CGGGGSHHHHHHHHHHHHTCCHHHHH
T ss_pred             HHHHHHHHcCCCCEEEEeeeeccccCCcccc-c----ccC-ccccc---cC---CcchhHHHHHHHHHHHHhCCCHHHHH
Confidence            3789999999999999999999998876321 0    100 00100   01   11113589999999999999999999


Q ss_pred             HHHHHHHHHHHhhhhCCCCCccccceeeecCCCc-eeEeccCCCCCCCCHHHHhcCCCcccc-CCccccCCCCCCCCCcE
Q psy4157         289 EYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGD-VVVAKDEYPKANTTVEALQKLRPVFQK-DGTVTAGNASGINDGAA  366 (441)
Q Consensus       289 ~~A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~g~-~~~~~D~~~r~~~t~e~l~~~~~v~~p-~G~lt~~n~~~~sDGAA  366 (441)
                      +||++||+||.+|++.|+|.+||+|++++.+++. ..++.|+++|+++|+|+|+++||+++| +|++|++|||+++|||+
T Consensus       170 ~~a~~s~~~a~~a~~~g~~~~ei~p~~~~~~~~~~~~fd~d~~~r~~~t~e~~~~~~~i~~p~~G~vt~~~~~~~~dGAa  249 (390)
T 1wdk_C          170 AFAVRSHQLAHKATVEGKFKDEIIPMQGYDENGFLKIFDYDETIRPDTTLESLAALKPAFNPKGGTVTAGTSSQITDGAS  249 (390)
T ss_dssp             HHHHHHHHHHHHHHHTTTTTTTBCCEEEECTTCCEEEECSCTTCCTTCCHHHHHTSCCSSCTTTCCCCGGGBCCCEEEEE
T ss_pred             HHHHHHHHHHHHHHhcCCcccceeeeeeccCCCcceeeccccccCCCCCHHHHhcCCCcccCCCCcEechhcCcccchhh
Confidence            9999999999999999999999999988765554 578999999999999999999999999 99999999999999999


Q ss_pred             EEEEcCHHHHHhcCCCceEEEEEEEeecCCCCcCCCChHHHHHHHHHHcCCCCCCccEEEecCCChhhhhhhhc
Q psy4157         367 AVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATSGGIANRRQE  440 (441)
Q Consensus       367 AvVLaSe~~A~~lg~~p~a~I~~~~~~~~~p~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~~~~~~~  440 (441)
                      +|||+|++.|++++.+|+++|++++..+.+|..++.++..|++++|+++||+++|||++|+||+|++.+..++|
T Consensus       250 avvL~s~~~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId~ve~~d~f~~~~~~~~~  323 (390)
T 1wdk_C          250 CMIVMSAQRAKDLGLEPLAVIRSMAVAGVDPAIMGYGPVPATQKALKRAGLNMADIDFIELNEAFAAQALPVLK  323 (390)
T ss_dssp             EEEEEEHHHHHHTTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCCEEEECCSBHHHHHHHHH
T ss_pred             eeEEecHHHHHHcCCCccEEEEEEEEeccChhhcchhHHHHHHHHHHHcCCChhhCcEEEeccCCHHHHHHHHH
Confidence            99999999999999999999999999888888888899999999999999999999999999999987766554

>3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium}

Probab=100.00  E-value=3e-36  Score=310.67  Aligned_cols=217  Identities=36%  Similarity=0.499  Sum_probs=175.9

Q ss_pred             hhhHHhhhcCeeEEEEeecccCCCCccchh-cccccccCcccccchhhhcccccccccchHHHHHHHHHHHhCCCHHHHH
Q psy4157         210 LARIAIKSGDATAIVAGGQECMSQAPHVIN-IRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQD  288 (441)
Q Consensus       210 ~A~~~I~sG~advvla~G~E~ms~~P~~~~-~r~g~~~g~~~~~~d~~~~g~~~~~~~~~ma~~Ae~~a~~~Gitre~ld  288 (441)
                      +|+.+|++|++|++|++|+|+|+..|+... .++.         .+..   +..++....|++.|++++++||++|++||
T Consensus       105 ~A~~~I~sG~~d~vLv~G~e~~s~~p~~~~~~~~~---------~~~~---~~~~~~~~~~g~~Ae~~a~~~~i~re~~d  172 (407)
T 3svk_A          105 TAAQKVRSGWDDLVLAGGVESMSRVPMGSDGGAWA---------TDPE---TNYRIGFVPQGIGADLIATLEGFSREDVD  172 (407)
T ss_dssp             HHHHHHHHTSCCEEEEEEEECC-----------CC---------CCTT---TCCCCCCHHHHHHHHHHHHHHTCCHHHHH
T ss_pred             HHHHHHHcCCCCEEEEEEEcccccCcccccccccc---------cCch---hhccccccCHHHHHHHHHHHhCcCHHHHH
Confidence            689999999999999999999999887432 1110         0111   11122335789999999999999999999


Q ss_pred             HHHHHHHHHHHhhhhCCCCCccccceeeecCCCceeEeccCCCCCCCCHHHHhcCCCccccCCcc---------------
Q psy4157         289 EYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTV---------------  353 (441)
Q Consensus       289 ~~A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~g~~~~~~D~~~r~~~t~e~l~~~~~v~~p~G~l---------------  353 (441)
                      +|++.||++|..|+++|.|++||+|++.  ++|...+++|+++|+++|+|+|++++|+|+|.|++               
T Consensus       173 ~~a~~s~~~A~~A~~~g~~~~ei~pv~~--~~g~~~~~pd~~~r~~~t~e~l~~~~~vf~~~g~v~~~~~~~~~~~~~~~  250 (407)
T 3svk_A          173 AYALRSQQKAAAAWSGGYFAKSVVPVRD--QNGLVILDHDEHMRPDTTMEGLAKLKTAFDGVGEMGGFDDVALQKYHWVE  250 (407)
T ss_dssp             HHHHHHHHHHHHHHHTTTTTTTBCCEEC--TTSCEEECSCTTCCTTCCHHHHHTSCBSCC-------------CTTTTCS
T ss_pred             HHHHHHHHHHHHHHHcCCcccceeeeec--CCCceeeCCccccCCCCCHHHHhhCCCeecCCCccccccccccccccccc
Confidence            9999999999999999999999999973  44556789999999999999999999999986654               


Q ss_pred             ------ccCCCCCCCCCcEEEEEcCHHHHHhcCCCceEEEEEEEeecCCCCcCCCChHHHHHHHHHHcCCCCCCccEEEe
Q psy4157         354 ------TAGNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYFNR  427 (441)
Q Consensus       354 ------t~~n~~~~sDGAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~~p~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei  427 (441)
                            |++|||+++|||+++||+|++.|++++.+|+++|++++..+.+|..+..++..|++++|+++||+++|||++|+
T Consensus       251 ~i~~~~t~~~~s~~~DGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId~~e~  330 (407)
T 3svk_A          251 KINHVHTGGNSSGIVDGAALVLVGSEKAGKSQGLTPRARIVATATSGSDPVIMLTGPTPATRKVLDRAGLTIDDIDLFEL  330 (407)
T ss_dssp             SCCCCCBTTTBCCBEEEEEEEEEECHHHHHHTTCCCCEEEEEEEEC------CCCTHHHHHHHHHHHHTCCGGGCSEEEE
T ss_pred             cccccccccccCcccCceeEEEEeeHHHHHHcCCCCcEEEEEEEEeccCCccccHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence                  99999999999999999999999999999999999999999999988899999999999999999999999999


Q ss_pred             cCCChhhhhhhhc
Q psy4157         428 VATSGGIANRRQE  440 (441)
Q Consensus       428 ~D~Ft~~~~~~~~  440 (441)
                      ||+|+++...++|
T Consensus       331 hdaf~~~~l~~~~  343 (407)
T 3svk_A          331 NEAFASVVLKFQK  343 (407)
T ss_dssp             CCSBHHHHHHHHH
T ss_pred             eChhHHHHHHHHH
Confidence            9999999877665

>2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens}

Probab=100.00  E-value=1.4e-35  Score=306.69  Aligned_cols=222  Identities=37%  Similarity=0.517  Sum_probs=186.6

Q ss_pred             chhhHHhhhcCeeEEEEeecccCCCCccchhcccccccCcccccchhhhcccccccccchHHHHHHHHHHHhCCCHHHHH
Q psy4157         209 PLARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQD  288 (441)
Q Consensus       209 ~~A~~~I~sG~advvla~G~E~ms~~P~~~~~r~g~~~g~~~~~~d~~~~g~~~~~~~~~ma~~Ae~~a~~~Gitre~ld  288 (441)
                      .+|+..|++|.+|++|++|+|.|+..|....   + .+.+  .+.+.  ....+++  ..|++.++++|++||+|||+||
T Consensus       125 ~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~---~-~~~~--~~~~~--~~~~~~~--~~~g~~a~~~a~~~gitre~~~  194 (418)
T 2iik_A          125 ASIAGGIRNGSYDIGMACGVESMSLADRGNP---G-NITS--RLMEK--EKARDCL--IPMGITSENVAERFGISREKQD  194 (418)
T ss_dssp             HHHHHHHHTTSCSEEEEEEEEETTTCC---------CCCT--TGGGC--HHHHGGG--SCHHHHHHHHHHHTTCCHHHHH
T ss_pred             HHHHHHHHCCCCCEEEEeccccCccCCccCC---c-ccch--hhhcc--ccccccc--ccHHHHHHHHHHHhCCCHHHHH
Confidence            3689999999999999999999999876321   0 0000  01000  0111111  3588999999999999999999


Q ss_pred             HHHHHHHHHHHhhhhCCCCCccccceeee--cCCC---ceeEeccCCCCCCCCHHHHhcCCCccccCCccccCCCCCCCC
Q psy4157         289 EYAYQSQVKTAKAQEGGYFDEEIVPVVIS--TRKG---DVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGIND  363 (441)
Q Consensus       289 ~~A~~S~~~A~~A~~~g~f~~ei~Pv~v~--~~~g---~~~~~~D~~~r~~~t~e~l~~~~~v~~p~G~lt~~n~~~~sD  363 (441)
                      +||++||+||..+++.|+|++||+|++++  .++|   .++++.|+.+|+.+|+|+|+++||+|+++|++|++|||+++|
T Consensus       195 ~~a~~s~~~A~~a~~~g~~~~ei~pv~~~~~~~~~~~~~~~~~~d~~~rp~~t~e~l~~~~~vfd~~~~~t~~d~~~~~D  274 (418)
T 2iik_A          195 TFALASQQKAARAQSKGCFQAEIVPVTTTVHDDKGTKRSITVTQDEGIRPSTTMEGLAKLKPAFKKDGSTTAGNSSQVSD  274 (418)
T ss_dssp             HHHHHHHHHHHHHHHHTTTTTTBCCEEEEEECTTSCEEEEEECSCTTCCTTCCHHHHHHCCCSSSTTCCCCSTTBCCCEE
T ss_pred             HHHHHHHHHHHhChhcCccccceeeeeeccccccCcccceeeecccCcCCCCCHHHHhhCCCcccCCCceeeccccCCCC
Confidence            99999999999888789999999999864  3333   257889999999999999999999999888999999999999


Q ss_pred             CcEEEEEcCHHHHHhcCCCceEEEEEEEeecCCCCcCCCChHHHHHHHHHHcCCCCCCccEEEecCCChhhhhhhhc
Q psy4157         364 GAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATSGGIANRRQE  440 (441)
Q Consensus       364 GAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~~p~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~~~~~~~  440 (441)
                      ||+||||+|++.|++++.+|+++|++++..+.+|..++.++..|++++|++|||+++|||++|+||+|++.....+|
T Consensus       275 GAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId~vE~h~af~~~~~~~~~  351 (418)
T 2iik_A          275 GAAAILLARRSKAEELGLPILGVLRSYAVVGVPPDIMGIGPAYAIPVALQKAGLTVSDVDIFEINEAFASQAAYCVE  351 (418)
T ss_dssp             EEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCGGGGGGHHHHHHHHHHHHHTCCGGGEEEEEECCSBHHHHHHHHH
T ss_pred             CceEEEEecHHHHHhcCCCceEEEEEEEeccCCchhcchhHHHHHHHHHHHcCCCHHHCCeeeeeccchHHHHHHHH
Confidence            99999999999999999999999999999888888888889999999999999999999999999999988776654

>2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A*

Probab=100.00  E-value=9.8e-35  Score=298.02  Aligned_cols=229  Identities=41%  Similarity=0.583  Sum_probs=192.6

Q ss_pred             chhhHHhhhcCeeEEEEeecccCCCCccchhcccccccCcccccchh-hhcccccccccchHHHHHHHHHHHhCCCHHHH
Q psy4157         209 PLARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSM-VFDGLTDAFHNIHMGITAENIAKKWSISRLEQ  287 (441)
Q Consensus       209 ~~A~~~I~sG~advvla~G~E~ms~~P~~~~~r~g~~~g~~~~~~d~-~~~g~~~~~~~~~ma~~Ae~~a~~~Gitre~l  287 (441)
                      .+|+.+|++|++|++|++|+|.|+..|.... +.+..++. ..+.+. .+.++++++....|++.+++|+++||++|+++
T Consensus       102 ~~A~~~I~~G~~d~vlvgG~e~~s~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~m~~~a~~~~~~~g~sre~~  179 (395)
T 2ib8_A          102 MMASQSLMCGHQDVMVAGGMESMSNVPYVMN-RGSTPYGG-VKLEDLIVKDGLTDVYNKIHMGSCAENTAKKLNIARNEQ  179 (395)
T ss_dssp             HHHHHHHHTTSCSEEEEEEEEEGGGCCEEEC-SSBCCTTC-EEEEEHHHHHTTEETTTTEEHHHHHHHHHHHHTCCHHHH
T ss_pred             HHHHHHHHCCCCCEEEEEeeecccCCccccc-cccccccc-ccccccccccccccccccchHHHHHHHHHHHcCCCHHHH
Confidence            3689999999999999999999998876321 11101111 011111 12233444445679999999999999999999


Q ss_pred             HHHHHHHHHHHHhhhhCCCCCccccceeeecCCC-ceeEeccCCCCCCCCHHHHhcCCCcccc-CCccccCCCCCCCCCc
Q psy4157         288 DEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKG-DVVVAKDEYPKANTTVEALQKLRPVFQK-DGTVTAGNASGINDGA  365 (441)
Q Consensus       288 d~~A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~g-~~~~~~D~~~r~~~t~e~l~~~~~v~~p-~G~lt~~n~~~~sDGA  365 (441)
                      ++||++||+||.+|++.++|++||+|+++++.++ +..++.|+++| ++++|.+.+++|+|++ .|++|++|||+++|||
T Consensus       180 ~~~A~~s~~~a~~a~~~~~f~~ei~p~~~~~~~~p~~~~~~D~~~r-~~~~~~l~~l~~~f~~~~g~vt~~~~~~~~dGA  258 (395)
T 2ib8_A          180 DAYAINSYTRSKAAWEAGKFGNEVIPVTVTVKGQPDVVVKEDEEYK-RVDFSKVPKLKTVFQKENGTVTAANASTLNDGA  258 (395)
T ss_dssp             HHHHHHHHHHHHHHHHTTTTTTTBCCEEECCTTSCCEEECSCSGGG-SCCTTTGGGSCCTTCSSSCCCCTTTBCCCEEEE
T ss_pred             HHHHHHHHHHHHhcccccCcccceeeeeecccCCcceeeccccccc-cCCHHHHhcCCccccCCCCCcccccCCccccce
Confidence            9999999999999999999999999999876433 35788999999 5899999999999954 6999999999999999


Q ss_pred             EEEEEcCHHHHHhcCCCceEEEEEEEeecCCCCcCCCChHHHHHHHHHHcCCCCCCccEEEecCCChhhhhhhhc
Q psy4157         366 AAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATSGGIANRRQE  440 (441)
Q Consensus       366 AAvVLaSe~~A~~lg~~p~a~I~~~~~~~~~p~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~~~~~~~  440 (441)
                      ++|||+|++.|++++.+|+++|++++..+.+|..++.++..|++++|+++||+++|||++|+||+|++.+..++|
T Consensus       259 aavvL~s~~~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId~ie~~D~f~~~~l~~~e  333 (395)
T 2ib8_A          259 AALVLMTADAAKRLNVTPLARIVAFADAAVEPIDFPIAPVYAASMVLKDVGLKKEDIAMWEVNEAFSLVVLANIK  333 (395)
T ss_dssp             EEEEEEEHHHHHHTTCCCCEEEEEEEEEECCGGGGGGHHHHHHHHHHHHHTCCGGGEEEEEECCSBHHHHHHHHH
T ss_pred             eEEEEecHHHHHhcCCCccEEEEEEEEeccChhhccccHHHHHHHHHHHcCCCHHHcCEEEEccccHHHHHHHHH
Confidence            999999999999999999999999998877887777788999999999999999999999999999999988775

>4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis}

Probab=99.96  E-value=1e-31  Score=284.72  Aligned_cols=223  Identities=13%  Similarity=0.025  Sum_probs=163.4

Q ss_pred             chhhHHhhhcCeeEEEEeecccCCCCccchhcccccccCcccccchhhhcccccccccchHHHHHHHHHHHhCCCHHHHH
Q psy4157         209 PLARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQD  288 (441)
Q Consensus       209 ~~A~~~I~sG~advvla~G~E~ms~~P~~~~~r~g~~~g~~~~~~d~~~~g~~~~~~~~~ma~~Ae~~a~~~Gitre~ld  288 (441)
                      .+|+++|++|++|++|++|+|+|++.|+...  .+...+. ....+.     ........|...++.+..+||++++.++
T Consensus       123 ~~AA~aI~aG~advvlAgG~EsMS~~p~~~~--~~~~~~~-~~~~~~-----~~~~~~~~~~~~a~~~~~~~g~~~~~~~  194 (520)
T 4egv_A          123 TEFGGKIAAGENDVVLIFGSENTSTLRHFSK--AENKPDH-SETVDG-----QLEDRGYGYDGIFDEYTIRHGLIGAPVQ  194 (520)
T ss_dssp             HHHHHHHHTTSCSEEEEEEEECCC------------------------------------------CTTGGGTCCSHHHH
T ss_pred             HHHHHHHHcCCCCEEEEEEEEeccccccccc--cccccCc-cccccc-----cccccccccchhHHHHHHHhCCCcHHHH
Confidence            4789999999999999999999999987542  1111100 000000     0111123456677888999999999999


Q ss_pred             HHHHHHHHHHHhhhhCCCCCccccceeeecCCCceeEeccCCCCCCCCHHHHhcCCCcccc--CCccccCCCCCCCCCcE
Q psy4157         289 EYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQK--DGTVTAGNASGINDGAA  366 (441)
Q Consensus       289 ~~A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~g~~~~~~D~~~r~~~t~e~l~~~~~v~~p--~G~lt~~n~~~~sDGAA  366 (441)
                      .+++.||.++..++..+.|++||.|+.++..+. ...++|+++|.++|+|++.++++.+.+  ++++|++|||+++|||+
T Consensus       195 ~~~~~s~~~a~~g~~~~~f~~eia~v~v~~~~~-a~~np~a~~r~~~t~E~l~~l~p~~r~i~~p~~ta~nas~isDGAA  273 (520)
T 4egv_A          195 YGLLENARRARLGLSVADYRLAMAELFAPFSKV-AAKNPYSSAPTERSVEELLTVTASNRMIVDPYPRLMVARDQVNQGA  273 (520)
T ss_dssp             HHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHH-HHHCTTSSSCCCCCHHHHHSCCSSSCEEETTEEGGGCC--CCCEEE
T ss_pred             HHHHHHHHHHHHccccchhhhheeEEEEecccc-cccCccccccCCCCHHHhcccCcccccccCCcccccccCCCCcceE
Confidence            999999999988888888888998886654322 234678999999999999998877654  46789999999999999


Q ss_pred             EEEEcCHHHHHhcCCCceEEEEEEEeecCCCCcCC--------CChHHHHHHHHHHcCCCCCCccEEEecCCChhhhhhh
Q psy4157         367 AVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMG--------TGPIPAVNAVLAKAGWSKEEVGYFNRVATSGGIANRR  438 (441)
Q Consensus       367 AvVLaSe~~A~~lg~~p~a~I~~~~~~~~~p~~~~--------~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~~~~~  438 (441)
                      ||||+|+++|+++|++|+++|.+++..+.+|..+.        .++..|++++|+++||+++|||++|+||||++.+..+
T Consensus       274 AvVL~S~e~A~~lGl~p~a~I~~~a~a~~~~~~~~~~~~~~~~~~~~~a~~~al~~agl~~~did~~E~~dAF~~~~l~~  353 (520)
T 4egv_A          274 ALLMMSVESARKLGVPEEKWVYLRGHADMKEPKLLERADIGASPASVTAVNEALRVAGIGLDDVAAFDLYSCFPFPVFNI  353 (520)
T ss_dssp             EEEEEEHHHHHHHTCCGGGCEEEEEEEEEECCCGGGCSCTTCCHHHHHHHHHHHHHHTCCGGGEEEEEECCSSSHHHHHH
T ss_pred             EEEEeeHHHHHHcCCCCceEEEEEEEeccCCcccccccccccChHHHHHHHHHHHHhCCCHHHCCEEEEeCCcHHHHHHH
Confidence            99999999999999999999999888776665442        3457899999999999999999999999999999887


Q ss_pred             hc
Q psy4157         439 QE  440 (441)
Q Consensus       439 ~~  440 (441)
                      +|
T Consensus       354 ~~  355 (520)
T 4egv_A          354 CD  355 (520)
T ss_dssp             HH
T ss_pred             HH
Confidence            76

>4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile}

Probab=99.93  E-value=5.6e-26  Score=233.19  Aligned_cols=156  Identities=61%  Similarity=0.893  Sum_probs=136.5

Q ss_pred             CCCCCccc-ccccCcCCCccccccccccCCcccccCCCchHhhHHHHHHHhCCCHHHHhHHHHhcHHHHHHHHhCCCCCc
Q psy4157           1 MSQAPHVI-NIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDE   79 (441)
Q Consensus         1 mS~~P~~~-~~r~g~~~g~~~~~d~~~~~~l~d~~~~~~mg~~ae~~a~~~~isRe~~D~~a~~s~~ra~~a~~~g~~~~   79 (441)
                      ||+.||.. ..|+++++|+....|.+..+++++++.+..||.+||+++++||||||+||+||++||++|.+|+++|+|++
T Consensus       123 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~tre~~~~~a~~s~~~a~~a~~~g~f~~  202 (396)
T 4dd5_A          123 MSMSPYLVPSARYGARMGDAAFVDSMIKDGLSDIFNNYHMGITAENIAEQWNITREEQDELALASQNKAEKAQAEGKFDE  202 (396)
T ss_dssp             STTCCEECTTTTTCCCSSCCCCEEHHHHHTSEETTTTEEHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTT
T ss_pred             ccCCcccccccccccccCcccccchhhhcccccccccchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHcCCccc
Confidence            78999875 68899999998889999999999999999999999999999999999999999999999999999999999


Q ss_pred             ceeeeEeccCCCceeeeccCCCCCCccHHHhhhcCcccccCCceecCCCCCCCCccccchhhhhcccCceeeecccCCCC
Q psy4157          80 EIVPVVISTRKGDVVVAKDEYPKANTSVDALQKLRPVFQKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEYPKA  159 (441)
Q Consensus        80 ei~p~~~~~~~g~~~~~~de~~~~~~~~~~l~~l~p~f~~~g~~t~~~~~~~~dg~~~~~~~~~~~~~~~~~~~d~~~~~  159 (441)
                      ||+||+++.+||..                                                        .+.+|+++|.
T Consensus       203 ei~pv~~~~~~~~~--------------------------------------------------------~~~~d~~~r~  226 (396)
T 4dd5_A          203 EIVPVVIKGRKGDT--------------------------------------------------------VVDKDEYIKP  226 (396)
T ss_dssp             TBCCEEEC----CE--------------------------------------------------------EECSCSCCCT
T ss_pred             ceeeeeeccCCCce--------------------------------------------------------eecCcccccC
Confidence            99999998766543                                                        3456666677


Q ss_pred             CCCHHHHhcCCCccCCCCcccCCCCCCccccchhhhhhhHHHHHhccCcchhh
Q psy4157         160 NTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQARNIQPLAR  212 (441)
Q Consensus       160 ~~~~~~~~~l~p~~~~~g~vtagn~s~~~Dgaa~~ll~s~~~a~~~gl~~~A~  212 (441)
                      ++|+|+|.++||+|.++|++|++|+|+++|||+++||.+++.+.++|..+++.
T Consensus       227 ~~t~e~l~~~~~v~~p~g~~t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~  279 (396)
T 4dd5_A          227 GTTMEKLAKLRPAFKKDGTVTAGNASGINDGAAMLVVMAKEKAEELGIEPLAT  279 (396)
T ss_dssp             TCCHHHHHHCCBSSSTTCSCBTTTBCCCEEEEEEEEEEEHHHHHHHTCCCSEE
T ss_pred             CCCHHHHhhCCCccCCCCCeecCCCCCcCcceeEEEEeeHHHHHHCCCCceEE
Confidence            77778888888888878899999999999999999999999999999877654

>3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis}

Probab=99.92  E-value=2e-25  Score=228.78  Aligned_cols=155  Identities=48%  Similarity=0.783  Sum_probs=137.8

Q ss_pred             CCCCCccc-ccccCcCCCccccccccccCCcccccCCCchHhhHHHHHHHhCCCHHHHhHHHHhcHHHHHHHHhCCCCCc
Q psy4157           1 MSQAPHVI-NIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDE   79 (441)
Q Consensus         1 mS~~P~~~-~~r~g~~~g~~~~~d~~~~~~l~d~~~~~~mg~~ae~~a~~~~isRe~~D~~a~~s~~ra~~a~~~g~~~~   79 (441)
                      ||+.|+.+ ..|+++++++..+.|.+. ++++|++....||.+||+++++||||||+||+||+.||++|.+++++|+|++
T Consensus       121 ~s~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~a~~~~~~~g~tre~~~~~a~~s~~~A~~a~~ag~f~~  199 (394)
T 3ss6_A          121 MSSSPYALKQHRWGQRLQHGEIRDTVW-EVLEDPIHHIMMGETAENLVEQYEITREEQDEVALRSHTLALKAIESGYFDD  199 (394)
T ss_dssp             CTTCCEEESSTTTCCCSSCCCCEEHHH-HHTBCTTTCCBHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHTTTTT
T ss_pred             ccCCcccccccccccccCCcccccccc-cccccccccchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHhcCCccc
Confidence            78999865 688999999888888776 8999999999999999999999999999999999999999999999999999


Q ss_pred             ceeeeEeccCCCceeeeccCCCCCCccHHHhhhcCcccccCCceecCCCCCCCCccccchhhhhcccCceeeecccCCCC
Q psy4157          80 EIVPVVISTRKGDVVVAKDEYPKANTSVDALQKLRPVFQKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEYPKA  159 (441)
Q Consensus        80 ei~p~~~~~~~g~~~~~~de~~~~~~~~~~l~~l~p~f~~~g~~t~~~~~~~~dg~~~~~~~~~~~~~~~~~~~d~~~~~  159 (441)
                      ||+||+++++||+.                                                        .+.+|+++|.
T Consensus       200 ei~p~~~~~~~~~~--------------------------------------------------------~~~~d~~~R~  223 (394)
T 3ss6_A          200 QIVPITIKERRKEV--------------------------------------------------------VFSKDEHPRA  223 (394)
T ss_dssp             TBCCEEEECSSCEE--------------------------------------------------------EECSCCCCCT
T ss_pred             eeEeEEeccCCCce--------------------------------------------------------eecccccccC
Confidence            99999998776643                                                        3456677777


Q ss_pred             CCCHHHHhcCCCccCCCCcccCCCCCCccccchhhhhhhHHHHHhccCcchhh
Q psy4157         160 NTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQARNIQPLAR  212 (441)
Q Consensus       160 ~~~~~~~~~l~p~~~~~g~vtagn~s~~~Dgaa~~ll~s~~~a~~~gl~~~A~  212 (441)
                      ++|+|++.++||+|.++|++|++|+|+++||+++++|++.+.+.++|..+++.
T Consensus       224 ~~t~e~~~~~~pvf~~~g~~t~~~~~~~~dGaaavvL~~~~~A~~~g~~~~a~  276 (394)
T 3ss6_A          224 DITAEKLAGLKPAFRKDGSVTAGNASGLNDGSAVLVLMSEEKAKEKGLQPLAR  276 (394)
T ss_dssp             TCCHHHHHTCCBSSSTTCCCBSTTBCCCEEEEEEEEEEEHHHHHHHTCCCSEE
T ss_pred             CCCHHHHhhCCCccCCCCceecCccCCcccceeEEEeccHHHHHHCCCCceEE
Confidence            78888888888888888899999999999999999999999999999877654

>1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A

Probab=99.91  E-value=2e-24  Score=221.69  Aligned_cols=156  Identities=57%  Similarity=0.900  Sum_probs=131.2

Q ss_pred             CCCCCcccccccCcCCCccccccccccCCcccccCCCchHhhHHHHHHHhCCCHHHHhHHHHhcHHHHHHHHhCCCCCcc
Q psy4157           1 MSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEE   80 (441)
Q Consensus         1 mS~~P~~~~~r~g~~~g~~~~~d~~~~~~l~d~~~~~~mg~~ae~~a~~~~isRe~~D~~a~~s~~ra~~a~~~g~~~~e   80 (441)
                      ||+.|+....|+++++++....+.++.+|++++|.+..||.++|+++++||||||+||+||++||++|+++++.|+|++|
T Consensus       122 ~s~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~a~~~~~~~g~tre~~~~~a~~s~~~A~~a~~~g~~~~e  201 (397)
T 1wl4_A          122 MSKAPHLAYLRTGVKIGEMPLTDSILCDGLTDAFHNCHMGITAENVAKKWQVSREDQDKVAVLSQNRTENAQKAGHFDKE  201 (397)
T ss_dssp             STTCCEECCCSSCCSSSCCCCEEHHHHHTTBCTTTCCBHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTTTTTT
T ss_pred             cCCCccccccccccccCcccccchhccccccCccccchHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHhhHhcCCcccc
Confidence            78888766567777777655566667789999888889999999999999999999999999999999999999999999


Q ss_pred             eeeeEeccCCCceeeeccCCCCCCccHHHhhhcCcccccCCceecCCCCCCCCccccchhhhhcccCceeeecccCCCCC
Q psy4157          81 IVPVVISTRKGDVVVAKDEYPKANTSVDALQKLRPVFQKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEYPKAN  160 (441)
Q Consensus        81 i~p~~~~~~~g~~~~~~de~~~~~~~~~~l~~l~p~f~~~g~~t~~~~~~~~dg~~~~~~~~~~~~~~~~~~~d~~~~~~  160 (441)
                      |+||+++++||+.+                                                        +.+|+++|.+
T Consensus       202 i~pv~~~~~~~~~~--------------------------------------------------------~~~d~~~r~~  225 (397)
T 1wl4_A          202 IVPVLVSTRKGLIE--------------------------------------------------------VKTDEFPRHG  225 (397)
T ss_dssp             BCCEEEEETTEEEE--------------------------------------------------------ECSCSCCCTT
T ss_pred             eeeeeeccCCCcee--------------------------------------------------------eccccccCCC
Confidence            99999987665433                                                        3455666666


Q ss_pred             CCHHHHhcCCCccCCC--CcccCCCCCCccccchhhhhhhHHHHHhccCcchhh
Q psy4157         161 TTVEALQKLRPVFQKD--GTVTAGNASGINDGAAAVLLMSYKRAQARNIQPLAR  212 (441)
Q Consensus       161 ~~~~~~~~l~p~~~~~--g~vtagn~s~~~Dgaa~~ll~s~~~a~~~gl~~~A~  212 (441)
                      +|+|+|.++||+|.++  |.+|.+|+|+++|||+++||++++.++++|..+++.
T Consensus       226 ~t~e~~~~~rpvfd~~~~G~vt~~~~s~~~dGAaavvL~s~~~A~~~g~~~~a~  279 (397)
T 1wl4_A          226 SNIEAMSKLKPYFLTDGTGTVTPANASGINDGAAAVVLMKKSEADKRGLTPLAR  279 (397)
T ss_dssp             CCHHHHHTSCCSSCCSSCCCCCTTSBCCCEEEEEEEEEEEHHHHHHTTCCCSEE
T ss_pred             CCHHHHhcCCCccCCCCCCCEechhcCCccchhheeeEecHHHHHHcCCCccEE
Confidence            7777777777777654  889999999999999999999999999999877554

>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile}

Probab=99.91  E-value=4.2e-25  Score=226.47  Aligned_cols=157  Identities=54%  Similarity=0.799  Sum_probs=133.8

Q ss_pred             CCCCCccc-ccccCcCCCccccccccccCCcccccCCCchHhhHHHHHHHhCCCHHHHhHHHHhcHHHHHHHHhCCCCCc
Q psy4157           1 MSQAPHVI-NIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDE   79 (441)
Q Consensus         1 mS~~P~~~-~~r~g~~~g~~~~~d~~~~~~l~d~~~~~~mg~~ae~~a~~~~isRe~~D~~a~~s~~ra~~a~~~g~~~~   79 (441)
                      ||+.||.. ..|+++++++..+.|.+..++++|++....||.+||+++++||||||+||+||++||++|.+|+++|+|++
T Consensus       121 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~tre~~~~~a~~s~~~a~~a~~~g~~~~  200 (395)
T 4e1l_A          121 MSQAPYIVPTARFGSKMGNITMVDSMLTDGLIDAFNQYHMGITAENIATKFEFTREMQDKLALESQNKAENAIKNNRFKE  200 (395)
T ss_dssp             TTTHHHHSBHHHHEEESCCC------CCTTEEEETTHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTT
T ss_pred             ccCCcccccccccccccCccccchhhcccccccccccchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCccc
Confidence            78888765 57888899988889999999999999989999999999999999999999999999999999999999999


Q ss_pred             ceeeeEeccCCCceeeeccCCCCCCccHHHhhhcCcccccCCceecCCCCCCCCccccchhhhhcccCceeeecccCCCC
Q psy4157          80 EIVPVVISTRKGDVVVAKDEYPKANTSVDALQKLRPVFQKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEYPKA  159 (441)
Q Consensus        80 ei~p~~~~~~~g~~~~~~de~~~~~~~~~~l~~l~p~f~~~g~~t~~~~~~~~dg~~~~~~~~~~~~~~~~~~~d~~~~~  159 (441)
                      ||+||+++.+||+.                                                       ..+.+|+++|.
T Consensus       201 ei~pv~~~~~~g~~-------------------------------------------------------~~~~~d~~~r~  225 (395)
T 4e1l_A          201 EIVPVDVLIRRGKI-------------------------------------------------------ETIDKDEYPKL  225 (395)
T ss_dssp             TBCCEEEEEETTEE-------------------------------------------------------EEECSCSCCCT
T ss_pred             ceeeeEeccCCCcc-------------------------------------------------------eEECCccccCC
Confidence            99999998776642                                                       13456777777


Q ss_pred             CCCHHHHhcCCCccCCCCcccCCCCCCccccchhhhhhhHHHHHhccCcchhh
Q psy4157         160 NTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQARNIQPLAR  212 (441)
Q Consensus       160 ~~~~~~~~~l~p~~~~~g~vtagn~s~~~Dgaa~~ll~s~~~a~~~gl~~~A~  212 (441)
                      ++|+|+|.++||+|.++|++|++|+|+++||+++++|++.+.+.++|..+++.
T Consensus       226 ~~t~e~l~~~~~v~~~~g~~t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~  278 (395)
T 4e1l_A          226 GMTFEGLSKLKPAFKKDGTVTAGNASGINDGAAMLILMSQQKADELGIRPLAK  278 (395)
T ss_dssp             TCCHHHHHHCCBSSSTTCSCBTTSBCCCEEEEEEEEEEEHHHHHHHTCCCSEE
T ss_pred             CCCHHHHhhCCCccCCCCCeeCCcCCCccceEEEEEEecHHHHHHCCCCeEEE
Confidence            78888888888888888899999999999999999999999999999877654

>2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ...

Probab=99.90  E-value=5e-24  Score=218.28  Aligned_cols=156  Identities=56%  Similarity=0.878  Sum_probs=128.9

Q ss_pred             CCCCCcccccccCcCCCccccccccccCCcccccCCCchHhhHHHHHHHhCCCHHHHhHHHHhcHHHHHHHHhCCCCCcc
Q psy4157           1 MSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEE   80 (441)
Q Consensus         1 mS~~P~~~~~r~g~~~g~~~~~d~~~~~~l~d~~~~~~mg~~ae~~a~~~~isRe~~D~~a~~s~~ra~~a~~~g~~~~e   80 (441)
                      ||+.|+....|+++++++....+.+..+++++++....||.+||+++++||||||+||+||++||+||.+++++|+|++|
T Consensus       119 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~s~e~~~~~a~~s~~~A~~~~~ag~~~~e  198 (392)
T 2vu1_A          119 MSMAPHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDAFAVASQNKAEAAQKDGRFKDE  198 (392)
T ss_dssp             STTCCEEECCTTCCCSSCEEEEEHHHHHHTBCTTTCCBHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHTTTTTT
T ss_pred             cCCCccccccccccccCcccccchhhhcccccccccchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHhcCCccce
Confidence            67888752345666665444556666778888888889999999999999999999999999999999999999999999


Q ss_pred             eeeeEeccCCCceeeeccCCCCCCccHHHhhhcCcccccCCceecCCCCCCCCccccchhhhhcccCceeeecccCCCCC
Q psy4157          81 IVPVVISTRKGDVVVAKDEYPKANTSVDALQKLRPVFQKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEYPKAN  160 (441)
Q Consensus        81 i~p~~~~~~~g~~~~~~de~~~~~~~~~~l~~l~p~f~~~g~~t~~~~~~~~dg~~~~~~~~~~~~~~~~~~~d~~~~~~  160 (441)
                      |+|++++.++|...                                                        +++||++|++
T Consensus       199 i~p~~~~~~~~~~~--------------------------------------------------------f~~d~~~r~~  222 (392)
T 2vu1_A          199 IVPFIVKGRKGDIT--------------------------------------------------------VDADEYIRHG  222 (392)
T ss_dssp             BCCEEECCTTCCEE--------------------------------------------------------ECSCSSCCTT
T ss_pred             eeeeeeccCCCcee--------------------------------------------------------eccccccCCC
Confidence            99999976655433                                                        3456666667


Q ss_pred             CCHHHHhcCCCccCCCCcccCCCCCCccccchhhhhhhHHHHHhccCcchhh
Q psy4157         161 TTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQARNIQPLAR  212 (441)
Q Consensus       161 ~~~~~~~~l~p~~~~~g~vtagn~s~~~Dgaa~~ll~s~~~a~~~gl~~~A~  212 (441)
                      +|+|+|.++||+|.++|.+|.+|+|+++|||+++||++++.++++|..+++.
T Consensus       223 ~t~e~~~~~~~v~~~~g~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~  274 (392)
T 2vu1_A          223 ATLDSMAKLRPAFDKEGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGR  274 (392)
T ss_dssp             CCHHHHHTCCCSSCTTCCCCSSSBCCCEEEEEEEEEEEHHHHHHHTCCCSEE
T ss_pred             CCHHHHhcCCCccCCCCCeeCcccCCccChhheeeEecHHHHHhcCCCccEE
Confidence            7777777777777777889999999999999999999999999999877553

>1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1

Probab=99.90  E-value=7.5e-24  Score=217.65  Aligned_cols=156  Identities=43%  Similarity=0.638  Sum_probs=125.5

Q ss_pred             CCCCCccc-ccccCcCCCcccccccc----ccCCcc-cccCCCchHhhHHHHHHHhCCCHHHHhHHHHhcHHHHHHHHhC
Q psy4157           1 MSQAPHVI-NIRNGIKLNDAEMKDSM----VFDGLT-DAFHNIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEG   74 (441)
Q Consensus         1 mS~~P~~~-~~r~g~~~g~~~~~d~~----~~~~l~-d~~~~~~mg~~ae~~a~~~~isRe~~D~~a~~s~~ra~~a~~~   74 (441)
                      ||+.|+.. ..|+++++++..+.+.+    ..+++. +.|...+|+.+||+++++||||||+||+||+.||++|++++++
T Consensus       119 ~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~a  198 (401)
T 1ulq_A          119 MSRAPYAVPKPERGFPTGNLVMYDTTLGWRFVNPKMQALYGTESMGETAENLAEMYGIRREEQDRFALLSHQKAVRAWEE  198 (401)
T ss_dssp             SSSCCEEECCCCSSSCCSCEEEEETTSSCCSCCHHHHHHSCCCCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cCCCcccccccccccccCcccccchhhhccccccccccccccchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhhhhc
Confidence            67888754 45667666643333332    334554 5566778999999999999999999999999999999999999


Q ss_pred             CCCCcceeeeEeccCCCceeeeccCCCCCCccHHHhhhcCcccccCCceecCCCCCCCCccccchhhhhcccCceeeecc
Q psy4157          75 GYFDEEIVPVVISTRKGDVVVAKDEYPKANTSVDALQKLRPVFQKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKD  154 (441)
Q Consensus        75 g~~~~ei~p~~~~~~~g~~~~~~de~~~~~~~~~~l~~l~p~f~~~g~~t~~~~~~~~dg~~~~~~~~~~~~~~~~~~~d  154 (441)
                      |+|++||+|++++++||+.                                                        .+++|
T Consensus       199 g~~~~ei~P~~~~~~~~~~--------------------------------------------------------~~~~d  222 (401)
T 1ulq_A          199 GRFQDEVVPVPVKRGKEEI--------------------------------------------------------LVEQD  222 (401)
T ss_dssp             TTTTTTBCCEEEEETTEEE--------------------------------------------------------EECSC
T ss_pred             CCcccceeceeecCCCCce--------------------------------------------------------eeccc
Confidence            9999999999998766543                                                        34556


Q ss_pred             cCCCCCCCHHHHhcCCCccCCCCcccCCCCCCccccchhhhhhhHHHHHhccCcchhh
Q psy4157         155 EYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQARNIQPLAR  212 (441)
Q Consensus       155 ~~~~~~~~~~~~~~l~p~~~~~g~vtagn~s~~~Dgaa~~ll~s~~~a~~~gl~~~A~  212 (441)
                      |++|+++|+|+|.++||+|.++|.+|.+|+|+++|||+++||++++.++++|..++++
T Consensus       223 ~~~r~~~t~e~~~~~rpif~~~G~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~  280 (401)
T 1ulq_A          223 EGPRRDTSLEKLAALRPVFREGGTVTAGNSSPLNDGAAAVLLVSDDYAKAHGLRPLAR  280 (401)
T ss_dssp             SCCCTTCCHHHHHHSCBSSSTTCSCBGGGBCCCEEEEEEEEEEEHHHHHHTTCCCSEE
T ss_pred             cccCCCCCHHHHhhCCCccCCCCCeechhcCCccchheEEEEecHHHHHHcCCCceEE
Confidence            6666677777777777777777889999999999999999999999999999877554

>3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium}

Probab=99.88  E-value=5.9e-23  Score=210.11  Aligned_cols=131  Identities=39%  Similarity=0.505  Sum_probs=109.4

Q ss_pred             ccCCcccccCCCchHhhHHHHHHHhCCCHHHHhHHHHhcHHHHHHHHhCCCCCcceeeeEeccCCCceeeeccCCCCCCc
Q psy4157          26 VFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANT  105 (441)
Q Consensus        26 ~~~~l~d~~~~~~mg~~ae~~a~~~~isRe~~D~~a~~s~~ra~~a~~~g~~~~ei~p~~~~~~~g~~~~~~de~~~~~~  105 (441)
                      .++++++++ ...||.+||+++++||||||+||+||+.||+||.+|++.|+|++||+||+++.++|+.            
T Consensus       135 ~~~~~~~~~-~~~~g~~a~~~~~~~g~tre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~~~~~------------  201 (387)
T 3goa_A          135 GLSRNVAKA-AGMMGLTAEMLSRLHGISREMQDQFAARSHARAWAATQSGAFKTEIIPTGGHDADGVL------------  201 (387)
T ss_dssp             TCC--------CCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEECTTSCE------------
T ss_pred             ccccccccc-cccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHhcCCcccceeeeeeccccCcc------------
Confidence            356777877 7899999999999999999999999999999999999999999999999998776641            


Q ss_pred             cHHHhhhcCcccccCCceecCCCCCCCCccccchhhhhcccCceeeecccCCCCCCCHHHHhcCCCccCC-CCcccCCCC
Q psy4157         106 SVDALQKLRPVFQKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEYPKANTTVEALQKLRPVFQK-DGTVTAGNA  184 (441)
Q Consensus       106 ~~~~l~~l~p~f~~~g~~t~~~~~~~~dg~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~p~~~~-~g~vtagn~  184 (441)
                                                                 ..++.|+++|.++|+|+|.++||+|.+ +|++|++|+
T Consensus       202 -------------------------------------------~~~~~d~~~r~~~t~e~l~~~~p~f~~~~g~~t~~~~  238 (387)
T 3goa_A          202 -------------------------------------------KQFNYDEVIRPETTVEALSTLRPAFDPVSGTVTAGTS  238 (387)
T ss_dssp             -------------------------------------------EEECSCTTCCTTCCHHHHTTSCCSSCTTTCCCCGGGB
T ss_pred             -------------------------------------------cccccccccCCCCCHHHHhcCCCcccCCCCceecccC
Confidence                                                       134567777777788888888888887 899999999


Q ss_pred             CCccccchhhhhhhHHHHHhccCcchhh
Q psy4157         185 SGINDGAAAVLLMSYKRAQARNIQPLAR  212 (441)
Q Consensus       185 s~~~Dgaa~~ll~s~~~a~~~gl~~~A~  212 (441)
                      |+++||+++++|++++.+.++|..+++.
T Consensus       239 ~~~~dGaaavvL~s~~~A~~~g~~~~a~  266 (387)
T 3goa_A          239 SALSDGAAAMLVMSESRARELGLKPRAR  266 (387)
T ss_dssp             CCCEEEEEEEEEEEHHHHHHTTCCCCEE
T ss_pred             CCcCccEEEEEEecHHHHHHcCCCccEE
Confidence            9999999999999999999999887654

>3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium}

Probab=99.85  E-value=2.4e-21  Score=199.48  Aligned_cols=142  Identities=38%  Similarity=0.503  Sum_probs=112.6

Q ss_pred             ccCCCchHhhHHHHHHHhCCCHHHHhHHHHhcHHHHHHHHhCCCCCcceeeeEeccCCCceeeeccCCCCCCccHHHhhh
Q psy4157          33 AFHNIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTSVDALQK  112 (441)
Q Consensus        33 ~~~~~~mg~~ae~~a~~~~isRe~~D~~a~~s~~ra~~a~~~g~~~~ei~p~~~~~~~g~~~~~~de~~~~~~~~~~l~~  112 (441)
                      ++...+||.+||+++++|+||||+||+|+++||+||..|+++|+|++||+||+.  ++|..+++.|+++|+++|+|++.+
T Consensus       147 ~~~~~~~g~~Ae~~a~~~~i~re~~d~~a~~s~~~A~~A~~~g~~~~ei~pv~~--~~g~~~~~pd~~~r~~~t~e~l~~  224 (407)
T 3svk_A          147 RIGFVPQGIGADLIATLEGFSREDVDAYALRSQQKAAAAWSGGYFAKSVVPVRD--QNGLVILDHDEHMRPDTTMEGLAK  224 (407)
T ss_dssp             CCCCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEC--TTSCEEECSCTTCCTTCCHHHHHT
T ss_pred             cccccCHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHcCCcccceeeeec--CCCceeeCCccccCCCCCHHHHhh
Confidence            344568999999999999999999999999999999999999999999999985  356667899999999999999999


Q ss_pred             cCcccccCCceecCCCCCCCCccccchhhhhcccCceeeecccCCCCCCCHHHHhcCCCccC-CCCcccCCCCCCccccc
Q psy4157         113 LRPVFQKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEYPKANTTVEALQKLRPVFQ-KDGTVTAGNASGINDGA  191 (441)
Q Consensus       113 l~p~f~~~g~~t~~~~~~~~dg~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~p~~~-~~g~vtagn~s~~~Dga  191 (441)
                      |||+|.+.|++.                 .+    | .+.   +.          .. |... -++.+|++|+|+++|||
T Consensus       225 ~~~vf~~~g~v~-----------------~~----~-~~~---~~----------~~-~~~~~i~~~~t~~~~s~~~DGA  268 (407)
T 3svk_A          225 LKTAFDGVGEMG-----------------GF----D-DVA---LQ----------KY-HWVEKINHVHTGGNSSGIVDGA  268 (407)
T ss_dssp             SCBSCC--------------------------------------C----------TT-TTCSSCCCCCBTTTBCCBEEEE
T ss_pred             CCCeecCCCccc-----------------cc----c-ccc---cc----------cc-cccccccccccccccCcccCce
Confidence            999998887530                 00    0 000   00          00 1111 25789999999999999


Q ss_pred             hhhhhhhHHHHHhccCcchhh
Q psy4157         192 AAVLLMSYKRAQARNIQPLAR  212 (441)
Q Consensus       192 a~~ll~s~~~a~~~gl~~~A~  212 (441)
                      ++++|++++.++++|..+++.
T Consensus       269 aavvL~s~~~A~~~g~~~~a~  289 (407)
T 3svk_A          269 ALVLVGSEKAGKSQGLTPRAR  289 (407)
T ss_dssp             EEEEEECHHHHHHTTCCCCEE
T ss_pred             eEEEEeeHHHHHHcCCCCcEE
Confidence            999999999999999887654

>2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A

Probab=99.84  E-value=3.5e-21  Score=200.16  Aligned_cols=134  Identities=38%  Similarity=0.526  Sum_probs=111.1

Q ss_pred             CCcccccCCCchHhhHHHHHHHhCCCHHHHhHHHHhcHHHHHHHHhCCCCCcceeeeEeccCCCceeeeccCCCCCCccH
Q psy4157          28 DGLTDAFHNIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTSV  107 (441)
Q Consensus        28 ~~l~d~~~~~~mg~~ae~~a~~~~isRe~~D~~a~~s~~ra~~a~~~g~~~~ei~p~~~~~~~g~~~~~~de~~~~~~~~  107 (441)
                      +++ +++....||.+||+++++||||||+||+||++||++|.+++++|+|++||+||+++.+..+.      .       
T Consensus       166 ~~~-~~~~~~~mg~~A~~~~~~~gisre~~~~~A~~s~~~A~~~p~ag~~~~ei~pv~~~~~~~~~------~-------  231 (442)
T 2wu9_A          166 FAQ-AQNCLLPMGVTSENVAQRFGVSRQEQDQAAVDSHRKAAAATAAGKFKDEIIPVKTKLVDPKT------G-------  231 (442)
T ss_dssp             CHH-HHHTTSCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEEECTTT------C-------
T ss_pred             ccc-cccchhHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhChhcccccccccceeeccccccc------c-------
Confidence            344 55666789999999999999999999999999999999999999999999999885211000      0       


Q ss_pred             HHhhhcCcccccCCceecCCCCCCCCccccchhhhhcccCceeeecccCCCCCCCHHHHhcCCCccCCCCcccCCCCCCc
Q psy4157         108 DALQKLRPVFQKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGI  187 (441)
Q Consensus       108 ~~l~~l~p~f~~~g~~t~~~~~~~~dg~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~p~~~~~g~vtagn~s~~  187 (441)
                                 +.|                          ...+++||++|+++|+|+|.++||+|.++|.+|++|+|++
T Consensus       232 -----------~~~--------------------------~~~~~~De~~r~~~t~e~~~~~rpvfd~~G~vt~~n~s~~  274 (442)
T 2wu9_A          232 -----------DEK--------------------------PITVSVDDGIRPTTTLASLGKLKPVFKKDGTTTAGNSSQV  274 (442)
T ss_dssp             -----------CEE--------------------------EEEECSCTTCCTTCCHHHHHTSCCSSCTTCCCCGGGBCCC
T ss_pred             -----------ccC--------------------------ceeeecccCcCCCCCHHHHhcCCCccCCCCCeechhcCCC
Confidence                       000                          1246778888888888888888888888899999999999


Q ss_pred             cccchhhhhhhHHHHHhccCcchhh
Q psy4157         188 NDGAAAVLLMSYKRAQARNIQPLAR  212 (441)
Q Consensus       188 ~Dgaa~~ll~s~~~a~~~gl~~~A~  212 (441)
                      +|||+++||++++.++++|..++++
T Consensus       275 ~DGAaavvL~s~e~A~~~g~~~~a~  299 (442)
T 2wu9_A          275 SDGAGAVLLMKRSVAMQKGLPVLGV  299 (442)
T ss_dssp             EEEEEEEEEEEHHHHHHHTCCCCEE
T ss_pred             CCceEEEEEeeHHHHHHcCCCceEE
Confidence            9999999999999999999877654

>2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A*

Probab=99.81  E-value=2.5e-20  Score=190.94  Aligned_cols=137  Identities=49%  Similarity=0.706  Sum_probs=112.7

Q ss_pred             ccccccccCCcccccCCCchHhhHHHHHHHhCCCHHHHhHHHHhcHHHHHHHHhCCCCCcceeeeEeccCCCceeeeccC
Q psy4157          20 EMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDE   99 (441)
Q Consensus        20 ~~~d~~~~~~l~d~~~~~~mg~~ae~~a~~~~isRe~~D~~a~~s~~ra~~a~~~g~~~~ei~p~~~~~~~g~~~~~~de   99 (441)
                      .+.|.+.++++++++.+.+||.+||+++++||||||+||+||++||++|.+|++.|+|++||+|+++++....       
T Consensus       142 ~~~~~~~~~~~~~~~~~~~m~~~a~~~~~~~g~sre~~~~~A~~s~~~a~~a~~~~~f~~ei~p~~~~~~~~p-------  214 (395)
T 2ib8_A          142 KLEDLIVKDGLTDVYNKIHMGSCAENTAKKLNIARNEQDAYAINSYTRSKAAWEAGKFGNEVIPVTVTVKGQP-------  214 (395)
T ss_dssp             EEEEHHHHHTTEETTTTEEHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEECCTTSC-------
T ss_pred             cccccccccccccccccchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhcccccCcccceeeeeecccCCc-------
Confidence            3445555678888888889999999999999999999999999999999999999999999999998753211       


Q ss_pred             CCCCCccHHHhhhcCcccccCCceecCCCCCCCCccccchhhhhcccCceeeecccCCCCCCCHHHHhcCCCccCC-CCc
Q psy4157         100 YPKANTSVDALQKLRPVFQKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEYPKANTTVEALQKLRPVFQK-DGT  178 (441)
Q Consensus       100 ~~~~~~~~~~l~~l~p~f~~~g~~t~~~~~~~~dg~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~p~~~~-~g~  178 (441)
                                                                      +..+++||.+| ++++|+|++|||+|.+ +|.
T Consensus       215 ------------------------------------------------~~~~~~D~~~r-~~~~~~l~~l~~~f~~~~g~  245 (395)
T 2ib8_A          215 ------------------------------------------------DVVVKEDEEYK-RVDFSKVPKLKTVFQKENGT  245 (395)
T ss_dssp             ------------------------------------------------CEEECSCSGGG-SCCTTTGGGSCCTTCSSSCC
T ss_pred             ------------------------------------------------ceeeccccccc-cCCHHHHhcCCccccCCCCC
Confidence                                                            01345566666 4666777777777743 688


Q ss_pred             ccCCCCCCccccchhhhhhhHHHHHhccCcchhh
Q psy4157         179 VTAGNASGINDGAAAVLLMSYKRAQARNIQPLAR  212 (441)
Q Consensus       179 vtagn~s~~~Dgaa~~ll~s~~~a~~~gl~~~A~  212 (441)
                      +|++|+|+++|||+++||++++.++++|..++++
T Consensus       246 vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~  279 (395)
T 2ib8_A          246 VTAANASTLNDGAAALVLMTADAAKRLNVTPLAR  279 (395)
T ss_dssp             CCTTTBCCCEEEEEEEEEEEHHHHHHTTCCCCEE
T ss_pred             cccccCCccccceeEEEEecHHHHHhcCCCccEE
Confidence            9999999999999999999999999999877554

>1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A

Probab=99.80  E-value=6.7e-20  Score=187.83  Aligned_cols=125  Identities=44%  Similarity=0.641  Sum_probs=104.4

Q ss_pred             CCcccccCCCchHhhHHHHHHHhCCCHHHHhHHHHhcHHHHHHHHhCCCCCcceeeeEeccCCCceeeeccCCCCCCccH
Q psy4157          28 DGLTDAFHNIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTSV  107 (441)
Q Consensus        28 ~~l~d~~~~~~mg~~ae~~a~~~~isRe~~D~~a~~s~~ra~~a~~~g~~~~ei~p~~~~~~~g~~~~~~de~~~~~~~~  107 (441)
                      +++ ++....+||.+||+++++||||||+||+||++||++|.+++++|+|++||+|+++++  |+ +             
T Consensus       152 ~g~-~~~~~~~~~~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~f~~ei~P~~~~~--~~-~-------------  214 (393)
T 1afw_A          152 NRE-AKKCLIPMGITNENVAANFKISRKDQDEFAANSYQKAYKAKNEGLFEDEILPIKLPD--GS-I-------------  214 (393)
T ss_dssp             CTT-GGGGGSCHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTSSTTTBCCEECTT--SC-E-------------
T ss_pred             ccc-ccccchhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHhhHhcCCccceeeeeeccC--Cc-e-------------
Confidence            455 444456899999999999999999999999999999999999999999999998864  22 3             


Q ss_pred             HHhhhcCcccccCCceecCCCCCCCCccccchhhhhcccCceeeecccCCCCCCCHHHHhcCCCccCCC-CcccCCCCCC
Q psy4157         108 DALQKLRPVFQKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKD-GTVTAGNASG  186 (441)
Q Consensus       108 ~~l~~l~p~f~~~g~~t~~~~~~~~dg~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~p~~~~~-g~vtagn~s~  186 (441)
                                                                 +++|+++|.++|+|+|.++||+|.++ |.+|.+|+|+
T Consensus       215 -------------------------------------------~~~d~~~r~~~t~e~~~~~rpvf~~~~G~vt~~~~~~  251 (393)
T 1afw_A          215 -------------------------------------------CQSDEGPRPNVTAESLSSIRPAFIKDRGTTTAGNASQ  251 (393)
T ss_dssp             -------------------------------------------ECSCSSCCSCCCHHHHHHCCBSCC---CCCBTTTBCC
T ss_pred             -------------------------------------------eccccccCCCCCHHHHhcCCCcccCCCCCeechhcCc
Confidence                                                       35566666667777777777777666 8899999999


Q ss_pred             ccccchhhhhhhHHHHHhccCcchhh
Q psy4157         187 INDGAAAVLLMSYKRAQARNIQPLAR  212 (441)
Q Consensus       187 ~~Dgaa~~ll~s~~~a~~~gl~~~A~  212 (441)
                      ++|||+++||++++.++++|..++++
T Consensus       252 ~~dGAaavvL~s~~~A~~~g~~~~a~  277 (393)
T 1afw_A          252 VSDGVAGVLLARRSVANQLNLPVLGR  277 (393)
T ss_dssp             BEEEEEEEEEEEHHHHHHTTCCCCEE
T ss_pred             ccchhheeeEecHHHHHHcCCCccEE
Confidence            99999999999999999999877554

>1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C*

Probab=99.79  E-value=1.6e-19  Score=184.73  Aligned_cols=121  Identities=40%  Similarity=0.564  Sum_probs=106.0

Q ss_pred             CchHhhHHHHHHHhCCCHHHHhHHHHhcHHHHHHHHhCCCCCcceeeeEeccCCCceeeeccCCCCCCccHHHhhhcCcc
Q psy4157          37 IHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTSVDALQKLRPV  116 (441)
Q Consensus        37 ~~mg~~ae~~a~~~~isRe~~D~~a~~s~~ra~~a~~~g~~~~ei~p~~~~~~~g~~~~~~de~~~~~~~~~~l~~l~p~  116 (441)
                      .+||.+||+++++||+|||+||+||++||+||.+++++|+|.+||+|++++.++|..                       
T Consensus       148 ~~~g~~a~~~~~~~g~s~e~~~~~a~~s~~~a~~a~~~g~~~~ei~p~~~~~~~~~~-----------------------  204 (390)
T 1wdk_C          148 GMMGLTAEMLGKMHGISREQQDAFAVRSHQLAHKATVEGKFKDEIIPMQGYDENGFL-----------------------  204 (390)
T ss_dssp             GSHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEECTTCCE-----------------------
T ss_pred             hHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhcCCcccceeeeeeccCCCcc-----------------------
Confidence            469999999999999999999999999999999999999999999999886544420                       


Q ss_pred             cccCCceecCCCCCCCCccccchhhhhcccCceeeecccCCCCCCCHHHHhcCCCccCC-CCcccCCCCCCccccchhhh
Q psy4157         117 FQKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEYPKANTTVEALQKLRPVFQK-DGTVTAGNASGINDGAAAVL  195 (441)
Q Consensus       117 f~~~g~~t~~~~~~~~dg~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~p~~~~-~g~vtagn~s~~~Dgaa~~l  195 (441)
                                                      ..+++||++|.++|+|+|.++||+|.+ +|++|.+|+|+++|||+++|
T Consensus       205 --------------------------------~~fd~d~~~r~~~t~e~~~~~~~i~~p~~G~vt~~~~~~~~dGAaavv  252 (390)
T 1wdk_C          205 --------------------------------KIFDYDETIRPDTTLESLAALKPAFNPKGGTVTAGTSSQITDGASCMI  252 (390)
T ss_dssp             --------------------------------EEECSCTTCCTTCCHHHHHTSCCSSCTTTCCCCGGGBCCCEEEEEEEE
T ss_pred             --------------------------------eeeccccccCCCCCHHHHhcCCCcccCCCCcEechhcCcccchhheeE
Confidence                                            124567777778888888888888887 89999999999999999999


Q ss_pred             hhhHHHHHhccCcchhh
Q psy4157         196 LMSYKRAQARNIQPLAR  212 (441)
Q Consensus       196 l~s~~~a~~~gl~~~A~  212 (441)
                      |++++.++++|..+++.
T Consensus       253 L~s~~~A~~~g~~~~a~  269 (390)
T 1wdk_C          253 VMSAQRAKDLGLEPLAV  269 (390)
T ss_dssp             EEEHHHHHHTTCCCSEE
T ss_pred             EecHHHHHHcCCCccEE
Confidence            99999999999877543

>2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens}

Probab=99.79  E-value=1.6e-19  Score=186.47  Aligned_cols=123  Identities=46%  Similarity=0.685  Sum_probs=105.3

Q ss_pred             CchHhhHHHHHHHhCCCHHHHhHHHHhcHHHHHHHHhCCCCCcceeeeEec--cCCCceeeeccCCCCCCccHHHhhhcC
Q psy4157          37 IHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVIS--TRKGDVVVAKDEYPKANTSVDALQKLR  114 (441)
Q Consensus        37 ~~mg~~ae~~a~~~~isRe~~D~~a~~s~~ra~~a~~~g~~~~ei~p~~~~--~~~g~~~~~~de~~~~~~~~~~l~~l~  114 (441)
                      .+||.++|+++++||||||+||+||++||++|.++++.|+|++||+||++.  +++|+..                    
T Consensus       173 ~~~g~~a~~~a~~~gitre~~~~~a~~s~~~A~~a~~~g~~~~ei~pv~~~~~~~~~~~~--------------------  232 (418)
T 2iik_A          173 IPMGITSENVAERFGISREKQDTFALASQQKAARAQSKGCFQAEIVPVTTTVHDDKGTKR--------------------  232 (418)
T ss_dssp             SCHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEEEECTTSCEE--------------------
T ss_pred             ccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhChhcCccccceeeeeeccccccCccc--------------------
Confidence            469999999999999999999999999999999999999999999999874  2222100                    


Q ss_pred             cccccCCceecCCCCCCCCccccchhhhhcccCceeeecccCCCCCCCHHHHhcCCCccCCCCcccCCCCCCccccchhh
Q psy4157         115 PVFQKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAV  194 (441)
Q Consensus       115 p~f~~~g~~t~~~~~~~~dg~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~p~~~~~g~vtagn~s~~~Dgaa~~  194 (441)
                                                       ...+++|+.+|+++|+|+|.++||+|.++|++|++|+|.++|||+++
T Consensus       233 ---------------------------------~~~~~~d~~~rp~~t~e~l~~~~~vfd~~~~~t~~d~~~~~DGAaav  279 (418)
T 2iik_A          233 ---------------------------------SITVTQDEGIRPSTTMEGLAKLKPAFKKDGSTTAGNSSQVSDGAAAI  279 (418)
T ss_dssp             ---------------------------------EEEECSCTTCCTTCCHHHHHHCCCSSSTTCCCCSTTBCCCEEEEEEE
T ss_pred             ---------------------------------ceeeecccCcCCCCCHHHHhhCCCcccCCCceeeccccCCCCCceEE
Confidence                                             02356777788788888888888888888899999999999999999


Q ss_pred             hhhhHHHHHhccCcchhh
Q psy4157         195 LLMSYKRAQARNIQPLAR  212 (441)
Q Consensus       195 ll~s~~~a~~~gl~~~A~  212 (441)
                      ||++++.++++|..+++.
T Consensus       280 vL~s~~~A~~~g~~~~a~  297 (418)
T 2iik_A          280 LLARRSKAEELGLPILGV  297 (418)
T ss_dssp             EEEEHHHHHHHTCCCCEE
T ss_pred             EEecHHHHHhcCCCceEE
Confidence            999999999999887654

>4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis}

Probab=99.61  E-value=1.9e-17  Score=175.39  Aligned_cols=121  Identities=10%  Similarity=0.001  Sum_probs=94.6

Q ss_pred             CCchHhhHHHHHHHhCCCHHHHhHHHHhcHHHHHHHHhCCCCCcceeeeEeccCCCceeeeccCCCCCCccHHHhhhcCc
Q psy4157          36 NIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTSVDALQKLRP  115 (441)
Q Consensus        36 ~~~mg~~ae~~a~~~~isRe~~D~~a~~s~~ra~~a~~~g~~~~ei~p~~~~~~~g~~~~~~de~~~~~~~~~~l~~l~p  115 (441)
                      ...|+.++|+++.+||++|++||.|+++||+|+..+++.|.|++||+||.++.++.                        
T Consensus       172 ~~~~~~~a~~~~~~~g~~~~~~~~~~~~s~~~a~~g~~~~~f~~eia~v~v~~~~~------------------------  227 (520)
T 4egv_A          172 GYGYDGIFDEYTIRHGLIGAPVQYGLLENARRARLGLSVADYRLAMAELFAPFSKV------------------------  227 (520)
T ss_dssp             ---------CTTGGGTCCSHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHH------------------------
T ss_pred             ccccchhHHHHHHHhCCCcHHHHHHHHHHHHHHHHccccchhhhheeEEEEecccc------------------------
Confidence            45788999999999999999999999999999999999999999999997754321                        


Q ss_pred             ccccCCceecCCCCCCCCccccchhhhhcccCceeeecccCCCCCCCHHHHhcCCCccCC--CCcccCCCCCCccccchh
Q psy4157         116 VFQKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEYPKANTTVEALQKLRPVFQK--DGTVTAGNASGINDGAAA  193 (441)
Q Consensus       116 ~f~~~g~~t~~~~~~~~dg~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~p~~~~--~g~vtagn~s~~~Dgaa~  193 (441)
                                                       .....|+++|.++|+|+|.+++|.|.+  ++++|++|+|++||||++
T Consensus       228 ---------------------------------a~~np~a~~r~~~t~E~l~~l~p~~r~i~~p~~ta~nas~isDGAAA  274 (520)
T 4egv_A          228 ---------------------------------AAKNPYSSAPTERSVEELLTVTASNRMIVDPYPRLMVARDQVNQGAA  274 (520)
T ss_dssp             ---------------------------------HHHCTTSSSCCCCCHHHHHSCCSSSCEEETTEEGGGCC--CCCEEEE
T ss_pred             ---------------------------------cccCccccccCCCCHHHhcccCcccccccCCcccccccCCCCcceEE
Confidence                                             123456677777788888888887764  678999999999999999


Q ss_pred             hhhhhHHHHHhccCcchhhH
Q psy4157         194 VLLMSYKRAQARNIQPLARI  213 (441)
Q Consensus       194 ~ll~s~~~a~~~gl~~~A~~  213 (441)
                      +||+|+++++++|+.++++.
T Consensus       275 vVL~S~e~A~~lGl~p~a~I  294 (520)
T 4egv_A          275 LLMMSVESARKLGVPEEKWV  294 (520)
T ss_dssp             EEEEEHHHHHHHTCCGGGCE
T ss_pred             EEEeeHHHHHHcCCCCceEE
Confidence            99999999999999998764

>4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A*

Probab=99.18  E-value=7e-11  Score=122.87  Aligned_cols=79  Identities=28%  Similarity=0.396  Sum_probs=67.5

Q ss_pred             CCCCCCCCCcEEEEEcCHHHHHhcCCCceEEEEEEEeecCCCCcCCC------ChHHHHHHHHHHcCCCCCCccEEEecC
Q psy4157         356 GNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGT------GPIPAVNAVLAKAGWSKEEVGYFNRVA  429 (441)
Q Consensus       356 ~n~~~~sDGAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~~p~~~~~------~~~~Aa~~al~~AGl~~~DID~~Ei~D  429 (441)
                      .+++.++|||+||||.+++.|++++.+|+++|++++... ++..+..      +...+++++|+++||+++|||++|+|+
T Consensus       257 ~~g~v~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~-d~~~~~~~~~~~~~~~~ai~~al~~Agl~~~dId~ve~Hg  335 (451)
T 4ddo_A          257 RDGFVMGEGAAMVVVESLDHALARGARPIAEIIGYGTTA-DAYHMTAGPDDGSGAMRAMKLALRMGDVAPEQVDYVNAHA  335 (451)
T ss_dssp             CCSBCBBCEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEE-CCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCC
T ss_pred             CCCcEEeceEEEEEEeeHHHHHhCCCceEEEEEEEEEec-CCCccCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEEecC
Confidence            467779999999999999999999999999999998776 3333221      347899999999999999999999999


Q ss_pred             CChhhh
Q psy4157         430 TSGGIA  435 (441)
Q Consensus       430 ~Ft~~~  435 (441)
                      ++|.+.
T Consensus       336 tgt~~~  341 (451)
T 4ddo_A          336 TSTPVG  341 (451)
T ss_dssp             CSCHHH
T ss_pred             CcCccc
Confidence            999754

>3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A

Probab=99.18  E-value=1.6e-11  Score=126.87  Aligned_cols=79  Identities=29%  Similarity=0.411  Sum_probs=68.9

Q ss_pred             CCCCCCCCCcEEEEEcCHHHHHhcCCCceEEEEEEEeecC-----CCCcCCCChHHHHHHHHHHcCCCCCCccEEEecCC
Q psy4157         356 GNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGV-----EPTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVAT  430 (441)
Q Consensus       356 ~n~~~~sDGAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~-----~p~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~  430 (441)
                      .+++.++|||+||||.+++.|++.+.+++++|.+++...+     .|.....+...+++++|+++||+++|||++|.|++
T Consensus       242 ~~G~v~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~Hgt  321 (428)
T 3kzu_A          242 RDGFVMGEGAGIVVLEELEHALARGAKIYAEVIGYGMSGDAFHITAPTESGEGAQRCMVAALKRAGIVPDEIDYINAHGT  321 (428)
T ss_dssp             CCSBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCC
T ss_pred             CCceeecCceEEEEEccHHHHHhCCCceEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHeeEEEecCC
Confidence            4677799999999999999999999999999999987653     34444556789999999999999999999999999


Q ss_pred             Chhhh
Q psy4157         431 SGGIA  435 (441)
Q Consensus       431 Ft~~~  435 (441)
                      || .+
T Consensus       322 gT-~~  325 (428)
T 3kzu_A          322 ST-MA  325 (428)
T ss_dssp             SS-TT
T ss_pred             cc-hh
Confidence            99 44

>2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A*

Probab=99.18  E-value=1.4e-11  Score=126.78  Aligned_cols=79  Identities=24%  Similarity=0.295  Sum_probs=68.9

Q ss_pred             CCCCCCCCCcEEEEEcCHHHHHhcCCCceEEEEEEEeecC-----CCCcCCCChHHHHHHHHHHcCCCCCCccEEEecCC
Q psy4157         356 GNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGV-----EPTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVAT  430 (441)
Q Consensus       356 ~n~~~~sDGAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~-----~p~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~  430 (441)
                      .+++.++|||+||||.+++.|++.|.+++++|++++...+     .|...+.++..+++++|+++||+++|||++|+|++
T Consensus       234 ~dg~v~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~agl~~~dId~ve~Hgt  313 (416)
T 2wge_A          234 RDGFVFGEAGALMLIETEEHAKARGAKPLARLLGAGITSDAFHMVAPAADGVRAGRAMTRSLELAGLSPADIDHVNAHGT  313 (416)
T ss_dssp             CCCBCBBCEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCC
T ss_pred             CCCccccCceEEEEECcHHHHHHCCCceEEEEEEEEEecCCCCccCCCCChHHHHHHHHHHHHHcCCCHHHCCEEEECCC
Confidence            4678899999999999999999999999999999987652     34444556788999999999999999999999999


Q ss_pred             Chhh
Q psy4157         431 SGGI  434 (441)
Q Consensus       431 Ft~~  434 (441)
                      +|.+
T Consensus       314 gT~~  317 (416)
T 2wge_A          314 ATPI  317 (416)
T ss_dssp             CCHH
T ss_pred             CCcC
Confidence            9875

>3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes}

Probab=99.10  E-value=1.4e-10  Score=119.00  Aligned_cols=78  Identities=31%  Similarity=0.450  Sum_probs=67.2

Q ss_pred             CCCCCCCCcEEEEEcCHHHHHhcCCCceEEEEEEEeecC-----CCCcCCCChHHHHHHHHHHcCCCCCCccEEEecCCC
Q psy4157         357 NASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGV-----EPTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATS  431 (441)
Q Consensus       357 n~~~~sDGAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~-----~p~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~F  431 (441)
                      ++..++|||+||||.+++.|++.+.+++++|.+++...+     .|.....+...+++++|+++||+++|||++|+|+++
T Consensus       227 ~g~~~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~ve~Hgtg  306 (413)
T 3o04_A          227 DGFIIGEGAGIVILEEYEHAKARGAKIYAEIVGYGATGDAYHITAPAPNGEGAARAMKMAIDDAGLTPDKVDYINAHGTS  306 (413)
T ss_dssp             CSBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCGGGHHHHHHHHHHHHHHTCCGGGCCEEECCCCC
T ss_pred             CCceEeccEEEEEEeeHHHHHhCCCeEEEEEEEEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEEEeCCc
Confidence            566799999999999999999999999999999987653     233333456789999999999999999999999999


Q ss_pred             hhh
Q psy4157         432 GGI  434 (441)
Q Consensus       432 t~~  434 (441)
                      |.+
T Consensus       307 T~~  309 (413)
T 3o04_A          307 TPY  309 (413)
T ss_dssp             CHH
T ss_pred             Ccc
Confidence            874

>2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis}

Probab=99.04  E-value=5.8e-10  Score=115.44  Aligned_cols=77  Identities=23%  Similarity=0.296  Sum_probs=64.2

Q ss_pred             CCCCCCCCCcEEEEEcCHHHHHhcCCCceEEEEEEEeecC-----CCCcCCCChHHHHHHHHHHcCCCCCCccEEEecCC
Q psy4157         356 GNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGV-----EPTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVAT  430 (441)
Q Consensus       356 ~n~~~~sDGAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~-----~p~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~  430 (441)
                      .+++.++|||++|||.+++.|++.+.+++++|.+++...+     .|.....+...+++++|+++||+++|||++|+| .
T Consensus       251 ~~g~v~gdGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~Dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~H-g  329 (434)
T 2gp6_A          251 RDGFVFGEGGALLLIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGERAGHAITRAIQLAGLAPGDIDHVNAH-A  329 (434)
T ss_dssp             CCCCCBBCCEEEEEEEEHHHHHTTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHTTCCTTTEEEEECC-C
T ss_pred             CCCcceecceEEEEeCcHHHHHHCCCceEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCHHHcCEEEEe-C
Confidence            3667899999999999999999999889999999987653     233333456789999999999999999999999 5


Q ss_pred             Chh
Q psy4157         431 SGG  433 (441)
Q Consensus       431 Ft~  433 (441)
                      +..
T Consensus       330 tgt  332 (434)
T 2gp6_A          330 TGT  332 (434)
T ss_dssp             CSC
T ss_pred             CcC
Confidence            543

>3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A*

Probab=98.95  E-value=9.9e-10  Score=113.38  Aligned_cols=75  Identities=25%  Similarity=0.319  Sum_probs=64.0

Q ss_pred             CCCCCCCCcEEEEEcCHHHHHhcCCCceEEEEEEEeecCCCCc---CCCChHHHHHHHHHHcCCCCCCccEEEecCCChh
Q psy4157         357 NASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTL---MGTGPIPAVNAVLAKAGWSKEEVGYFNRVATSGG  433 (441)
Q Consensus       357 n~~~~sDGAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~~p~~---~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~  433 (441)
                      ++..++|||++|||.+++.|++.|.+|+++|++++...+....   .+.++..|++++|+  |++ +|||++|.|.+.|.
T Consensus       246 ~G~v~gEGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~P~~~~~~~ai~~Al~--gl~-~dId~ve~HgtgT~  322 (428)
T 3mqd_A          246 DGFVIAGGAGVLVLEDLETALARGAKIYGEIVGYGATSDGYDMVAPSGEGAIRCMKMALS--TVT-SKIDYINPHATSTP  322 (428)
T ss_dssp             CSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCSHHHHHHHHHHHT--TCC-SCCCEEECCCCSCH
T ss_pred             CCcccccceEEEEEccHHHHHhCCCcEEEEEEEEEEcCCCCCCCCCCHHHHHHHHHHHHh--CCc-cccCEEEEeCCCCC
Confidence            4556999999999999999999999999999999987643322   34567899999999  999 99999999988886


Q ss_pred             h
Q psy4157         434 I  434 (441)
Q Consensus       434 ~  434 (441)
                      +
T Consensus       323 ~  323 (428)
T 3mqd_A          323 A  323 (428)
T ss_dssp             H
T ss_pred             C
Confidence            4

>2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea}

Probab=98.82  E-value=8.4e-09  Score=115.93  Aligned_cols=81  Identities=19%  Similarity=0.211  Sum_probs=68.7

Q ss_pred             ccCCCCCCCCCcEEEEEcCHHHHHhcCCCceEEEEEEEeecCCCCcCCC-----ChHHHHHHHHHHcCCCCCCccEEEec
Q psy4157         354 TAGNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGT-----GPIPAVNAVLAKAGWSKEEVGYFNRV  428 (441)
Q Consensus       354 t~~n~~~~sDGAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~~p~~~~~-----~~~~Aa~~al~~AGl~~~DID~~Ei~  428 (441)
                      +..|++.++|||++|||.+.+.|++.|.++++.|+|++...+.......     +...+++++|++|||+++|||++|.|
T Consensus       255 ~~adG~~~gEGagavVL~~l~~A~~~g~~i~a~I~G~~~~~dg~~~~~~~P~~~~q~~ai~~Al~~Agl~p~dId~veaH  334 (917)
T 2hg4_A          255 KAADGFGLAEGAGVLVLQRLSAARREGRPVLAVLRGSAVNQDGASNGLTAPSGPAQQRVIRRALENAGVRAGDVDYVEAH  334 (917)
T ss_dssp             TTCCCBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSSCCCHHHHHHHHHHHHHHHTCCGGGCCEEECC
T ss_pred             ccccCCCCcceEEEEEEeeHHHHHhCCCCeEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEeec
Confidence            3568899999999999999999999999899999999977654333222     23579999999999999999999999


Q ss_pred             CCChhh
Q psy4157         429 ATSGGI  434 (441)
Q Consensus       429 D~Ft~~  434 (441)
                      +++|.+
T Consensus       335 gtgT~~  340 (917)
T 2hg4_A          335 GTGTRL  340 (917)
T ss_dssp             CCCCTT
T ss_pred             cCCCcc
Confidence            999964

>1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1

Probab=98.74  E-value=1.2e-08  Score=104.33  Aligned_cols=79  Identities=29%  Similarity=0.448  Sum_probs=67.8

Q ss_pred             CCCCCCCCCcEEEEEcCHHHHHhcCCCceEEEEEEEeecC-----CCCcCCCChHHHHHHHHHHcCCCCCCccEEEecCC
Q psy4157         356 GNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGV-----EPTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVAT  430 (441)
Q Consensus       356 ~n~~~~sDGAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~-----~p~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~  430 (441)
                      .+++.++|||++|||.+++.|++.|.+++++|.+++...+     .|.....+...+++++|+++|++++|||++|.|++
T Consensus       224 ~dg~v~geGaaavvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~Hgt  303 (408)
T 1j3n_A          224 RDGFVMGEGAGVLVLEAYEHAKKRGARIYAELVGFGRSADAHHITEPHPEGKGAALAMARALKDAGIAPEQVGYINAHGT  303 (408)
T ss_dssp             CCCBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCC
T ss_pred             CCceEEeeeEEEEEEeeHHHHHhCCCcEEEEEEEEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEEEeCC
Confidence            3677899999999999999999999989999999987653     23333445678999999999999999999999999


Q ss_pred             Chhh
Q psy4157         431 SGGI  434 (441)
Q Consensus       431 Ft~~  434 (441)
                      ||.+
T Consensus       304 gt~~  307 (408)
T 1j3n_A          304 STPV  307 (408)
T ss_dssp             SCHH
T ss_pred             cCcc
Confidence            9975

>2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A

Probab=98.73  E-value=1.4e-08  Score=105.20  Aligned_cols=78  Identities=29%  Similarity=0.446  Sum_probs=67.6

Q ss_pred             CCCCCCCCcEEEEEcCHHHHHhcCCCceEEEEEEEeecCC-----CCcCCCChHHHHHHHHHHcCCCCCCccEEEecCCC
Q psy4157         357 NASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVE-----PTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATS  431 (441)
Q Consensus       357 n~~~~sDGAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~~-----p~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~F  431 (441)
                      +++.++|||++|||.+.+.|++.+.+++++|++++...+.     |.....+...+++++|+++||+++|||++|+|+++
T Consensus       251 ~G~~~geGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~d~~~~t~p~~~~~~~~~ai~~Al~~Agl~p~dId~ve~Hgtg  330 (438)
T 2iwz_A          251 DGFVMGEGAAVLVLEEYEHAVQRRARIYAEVLGYGLSGDAGHITAPDPEGEGALRCMAAALKDAGVQPEEISYINAHATS  330 (438)
T ss_dssp             CSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCS
T ss_pred             CCEEeeceEEEEEeccHHHHHhCCCceEEEEecceecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEEecCCC
Confidence            5678999999999999999999999899999999976543     33333456789999999999999999999999999


Q ss_pred             hhh
Q psy4157         432 GGI  434 (441)
Q Consensus       432 t~~  434 (441)
                      |.+
T Consensus       331 T~~  333 (438)
T 2iwz_A          331 TPL  333 (438)
T ss_dssp             CHH
T ss_pred             Ccc
Confidence            985

>2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A

Probab=98.71  E-value=1.6e-08  Score=104.32  Aligned_cols=79  Identities=25%  Similarity=0.422  Sum_probs=67.7

Q ss_pred             CCCCCCCCCcEEEEEcCHHHHHhcCCCceEEEEEEEeecC-----CCCcCCCChHHHHHHHHHHcCCCCCCccEEEecCC
Q psy4157         356 GNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGV-----EPTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVAT  430 (441)
Q Consensus       356 ~n~~~~sDGAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~-----~p~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~  430 (441)
                      .+++.++|||+|+||.+++.|++.+.+++++|.+++...+     .|.....+...+++++|+++||+++|||++|.|.+
T Consensus       243 ~~g~~~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~agl~~~dId~ve~Hgt  322 (431)
T 2ix4_A          243 RDGFVIGEGSGVIVLEEYEHAKRRGAKIYAELCGYGMSGDAHHITQPPEDGKGAVLAMTRALRQSGLCPNQIDYVNAHAT  322 (431)
T ss_dssp             CCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCC
T ss_pred             CCCceeecceEEEEEccHHHHHhCCCceEEEEeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEEEeCC
Confidence            4677899999999999999999999999999999987653     23334445678999999999999999999999998


Q ss_pred             Chhh
Q psy4157         431 SGGI  434 (441)
Q Consensus       431 Ft~~  434 (441)
                      +|.+
T Consensus       323 gT~~  326 (431)
T 2ix4_A          323 STPI  326 (431)
T ss_dssp             SCHH
T ss_pred             cCcc
Confidence            8864

>1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1

Probab=98.71  E-value=1.7e-08  Score=103.62  Aligned_cols=79  Identities=23%  Similarity=0.299  Sum_probs=67.8

Q ss_pred             CCCCCCCCCcEEEEEcCHHHHHhcCCCceEEEEEEEeecCC-----CCcCCCChHHHHHHHHHHcCCCCCCccEEEecCC
Q psy4157         356 GNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVE-----PTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVAT  430 (441)
Q Consensus       356 ~n~~~~sDGAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~~-----p~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~  430 (441)
                      .+++.++|||++|||.+++.|++.+.+++++|++++...+.     |...+.+...+++++|+++||+++|||++|+|.+
T Consensus       230 ~~G~v~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p~~~~~~~~~ai~~al~~agl~~~dId~ve~Hgt  309 (416)
T 1e5m_A          230 RDGFVMGEGSGILILEELESALARGAKIYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWALKDSGLKPEMVSYINAHGT  309 (416)
T ss_dssp             CCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCC
T ss_pred             CCCceeeeeEEEEEECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHhHCCEEEEECC
Confidence            46778999999999999999999999899999999977543     3333345678999999999999999999999999


Q ss_pred             Chhh
Q psy4157         431 SGGI  434 (441)
Q Consensus       431 Ft~~  434 (441)
                      +|.+
T Consensus       310 gt~~  313 (416)
T 1e5m_A          310 STPA  313 (416)
T ss_dssp             SCHH
T ss_pred             CCcC
Confidence            9874

>1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A

Probab=98.70  E-value=1.6e-08  Score=104.28  Aligned_cols=80  Identities=29%  Similarity=0.362  Sum_probs=68.7

Q ss_pred             CCCCCCCCCcEEEEEcCHHHHHhcCCCceEEEEEEEeecC-----CCCcCCCChHHHHHHHHHHcCCCCCCccEEEecCC
Q psy4157         356 GNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGV-----EPTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVAT  430 (441)
Q Consensus       356 ~n~~~~sDGAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~-----~p~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~  430 (441)
                      .|++.++|||++|||.+++.|++.|.+++++|.+++...+     .|.....+...+++++|+++||+++|||++|.|++
T Consensus       245 ~~g~~~geGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~Hgt  324 (430)
T 1ox0_A          245 RNGFVMGEGSGMLVLESLEHAEKRGATILAEVVGYGNTCDAYHMTSPHPEGQGAIKAIKLALEEAEISPEQVAYVNAHGT  324 (430)
T ss_dssp             CCSBCBCCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCCEECCCC
T ss_pred             CCCccccceEEEEEECcHHHHHhCCCceEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHhCcCHHHcCEEEEeCC
Confidence            4778899999999999999999999999999999986543     23333445678999999999999999999999999


Q ss_pred             Chhhh
Q psy4157         431 SGGIA  435 (441)
Q Consensus       431 Ft~~~  435 (441)
                      +|.+.
T Consensus       325 gt~~~  329 (430)
T 1ox0_A          325 STPAN  329 (430)
T ss_dssp             SCHHH
T ss_pred             cCccc
Confidence            99864

>3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A

Probab=98.68  E-value=2.3e-08  Score=103.04  Aligned_cols=80  Identities=26%  Similarity=0.404  Sum_probs=68.5

Q ss_pred             CCCCCCCCcEEEEEcCHHHHHhcCCCceEEEEEEEeecC-----CCCcCCCChHHHHHHHHHHcCCCCCCccEEEecCCC
Q psy4157         357 NASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGV-----EPTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATS  431 (441)
Q Consensus       357 n~~~~sDGAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~-----~p~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~F  431 (441)
                      ++..++|||++|||.+++.|++.+.+++++|.+++...+     .|.....+...+++++|++|||+++|||++|+|.+.
T Consensus       242 ~G~v~geGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~Hgtg  321 (427)
T 3ho9_A          242 DGFVLGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNAHGTS  321 (427)
T ss_dssp             CSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSBTTBCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCS
T ss_pred             CCceeeeeEEEEEEccHHHHHHCCCcEEEEEEEEeecCCCCCcCCCCCCHHHHHHHHHHHHHHcCCCHHHccEEEecCCc
Confidence            556699999999999999999999999999999987653     333344567899999999999999999999999888


Q ss_pred             hhhhh
Q psy4157         432 GGIAN  436 (441)
Q Consensus       432 t~~~~  436 (441)
                      |..+.
T Consensus       322 T~~~d  326 (427)
T 3ho9_A          322 TPAGD  326 (427)
T ss_dssp             CHHHH
T ss_pred             CCCcC
Confidence            87554

>1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1

Probab=98.68  E-value=3e-08  Score=101.69  Aligned_cols=79  Identities=19%  Similarity=0.130  Sum_probs=67.3

Q ss_pred             CCCCCCCCCcEEEEEcCHHHHHhcCC-CceEEEEEEEeecCCCCcCCC--ChHHHHHHHHHHcCCCCCCccEEEecCCCh
Q psy4157         356 GNASGINDGAAAVLLMSYKTAQARNI-QPLARIVAMSSAGVEPTLMGT--GPIPAVNAVLAKAGWSKEEVGYFNRVATSG  432 (441)
Q Consensus       356 ~n~~~~sDGAAAvVLaSe~~A~~lg~-~p~a~I~~~~~~~~~p~~~~~--~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft  432 (441)
                      .+++.++|||++|||.+++.|++.|. +++++|.+++...+-......  +...+++++|+++||+++|||++|.|+++|
T Consensus       230 ~~G~~~geGaaavvL~~~~~A~~~g~~~i~a~I~g~~~~~dg~~~~~p~~~~~~ai~~al~~Agl~~~dId~ve~Hgtgt  309 (415)
T 1tqy_B          230 AAGYVPGEGGAILVLEDSAAAEARGRHDAYGELAGCASTFDPAPGSGRPAGLERAIRLALNDAGTGPEDVDVVFADGAGV  309 (415)
T ss_dssp             CCCBCBBCEEEEEEEEEHHHHHHHTCCCCSEEEEEEEEEECCCTTCCCCCSHHHHHHHHHHHHTCCGGGCCEEECCCCCS
T ss_pred             CCCcceeeeEEEEEECcHHHHHHCCCCceEEEEEEEEEccCCCCCCCCCHHHHHHHHHHHHHcCCCHhHCCEEEEeCCCC
Confidence            46788999999999999999999999 899999999876542221111  778999999999999999999999999998


Q ss_pred             hh
Q psy4157         433 GI  434 (441)
Q Consensus       433 ~~  434 (441)
                      .+
T Consensus       310 ~~  311 (415)
T 1tqy_B          310 PE  311 (415)
T ss_dssp             HH
T ss_pred             cC
Confidence            63

>2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus}

Probab=98.66  E-value=2.4e-08  Score=103.33  Aligned_cols=79  Identities=28%  Similarity=0.389  Sum_probs=67.6

Q ss_pred             CCCCCCCCCcEEEEEcCHHHHHhcCCCceEEEEEEEeecCCCCc-----CCCChHHHHHHHHHHcCCCCCCccEEEecCC
Q psy4157         356 GNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTL-----MGTGPIPAVNAVLAKAGWSKEEVGYFNRVAT  430 (441)
Q Consensus       356 ~n~~~~sDGAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~~p~~-----~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~  430 (441)
                      .+++.++|||++|||.+.+.|++.+.+++++|++++...+....     ...+...+++++|+++||+++|||++|.|++
T Consensus       250 ~~G~v~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~ai~~Al~~Agl~p~dId~ve~Hgt  329 (437)
T 2gqd_A          250 RDGFVMGEGAGILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDAGIEPKDVQYLNAHGT  329 (437)
T ss_dssp             CCSBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCGGGHHHHHHHHHHHHHHTCCGGGCCEEECCCC
T ss_pred             CCCceeeceEEEEEECcHHHHHhCCCceEEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHhhCCEEEEECC
Confidence            46778999999999999999999999999999999977643222     2234578999999999999999999999999


Q ss_pred             Chhh
Q psy4157         431 SGGI  434 (441)
Q Consensus       431 Ft~~  434 (441)
                      +|.+
T Consensus       330 gT~~  333 (437)
T 2gqd_A          330 STPV  333 (437)
T ss_dssp             SCHH
T ss_pred             CCcC
Confidence            9985

>1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1

Probab=98.60  E-value=4.9e-08  Score=100.46  Aligned_cols=79  Identities=18%  Similarity=0.211  Sum_probs=67.3

Q ss_pred             CCCCCCCCCcEEEEEcCHHHHHhcCCCceEEEEEEEeecCC-----CCcCCCChHHHHHHHHHHcCCCCCCccEEEecCC
Q psy4157         356 GNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVE-----PTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVAT  430 (441)
Q Consensus       356 ~n~~~~sDGAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~~-----p~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~  430 (441)
                      .+++.++|||++|||.+.+.|++.|.+++++|.+++...+.     |...+.+...+++++|+++||+++|||++|.|++
T Consensus       232 ~~G~v~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~g~~~~~ai~~al~~agl~~~dId~ve~Hgt  311 (424)
T 1tqy_A          232 RDGFVLAEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTGLKADGREMAETIRVALDESRTDATDIDYINAHGS  311 (424)
T ss_dssp             CCCBCEECEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCC
T ss_pred             CCceeeecceeEEEeccHHHHHhCCCcEEEEEeeeEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEecCc
Confidence            46788999999999999999999999999999999876542     2222334578999999999999999999999999


Q ss_pred             Chhh
Q psy4157         431 SGGI  434 (441)
Q Consensus       431 Ft~~  434 (441)
                      +|.+
T Consensus       312 gt~~  315 (424)
T 1tqy_A          312 GTRQ  315 (424)
T ss_dssp             CCHH
T ss_pred             cCcC
Confidence            9874

>4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum}

Probab=98.59  E-value=4.6e-08  Score=100.30  Aligned_cols=80  Identities=23%  Similarity=0.285  Sum_probs=67.6

Q ss_pred             CCCCCCCCCcEEEEEcCHHHHHhcCCCceEEEEEEEeecCCCCc---CCCChHHHHHHHHHHcCCCCCCccEEEecCCCh
Q psy4157         356 GNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTL---MGTGPIPAVNAVLAKAGWSKEEVGYFNRVATSG  432 (441)
Q Consensus       356 ~n~~~~sDGAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~~p~~---~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft  432 (441)
                      .+++.++|||++|||.+++.|++.+.+++++|++++...+-...   ...+...+++++|++|||+++|||++|.|...|
T Consensus       230 ~~G~~~geGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~Hgtgt  309 (412)
T 4ewg_A          230 RDGLVVGEGAATLVLEEYEHAKARGATIHAEIVGFGCNSDGAHMTQPTASTMARAMQLALEDAKLDANAIAYVNAHGTST  309 (412)
T ss_dssp             CCCBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSSCCHHHHHHHHHHHHHHTTCCGGGEEEEECCCCCC
T ss_pred             CCCCceECeEEEEEEccHHHHhhCCCcEEEEEEEEEEcCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEccCCCC
Confidence            46778999999999999999999999999999999977542211   123567899999999999999999999999988


Q ss_pred             hhh
Q psy4157         433 GIA  435 (441)
Q Consensus       433 ~~~  435 (441)
                      .+.
T Consensus       310 ~~~  312 (412)
T 4ewg_A          310 DRG  312 (412)
T ss_dssp             HHH
T ss_pred             ccc
Confidence            743

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=98.57  E-value=2.2e-07  Score=109.46  Aligned_cols=39  Identities=15%  Similarity=0.118  Sum_probs=34.6

Q ss_pred             CCCCCCCCcEEEEEcCHHHHHhcCCCceEEEEEEEeecC
Q psy4157         357 NASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGV  395 (441)
Q Consensus       357 n~~~~sDGAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~  395 (441)
                      +....+||++++||++.+.|.+.|.++++.|.+++...+
T Consensus      1349 ~Gfv~gEGag~vVL~~~~~A~~~G~~I~avI~g~a~~~D 1387 (1878)
T 2uv9_A         1349 NGFMESQGCGVQVIMTAQLALEMGVPIYGIVAMTSTATD 1387 (1878)
T ss_dssp             CCBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEECC
T ss_pred             CCCcccceeEEEEEeeHHHHHHCCCceEEEEEEEEEecC
Confidence            344589999999999999999999999999999997754

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=98.49  E-value=3.9e-07  Score=107.52  Aligned_cols=36  Identities=14%  Similarity=0.086  Sum_probs=33.2

Q ss_pred             CCCCCcEEEEEcCHHHHHhcCCCceEEEEEEEeecC
Q psy4157         360 GINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGV  395 (441)
Q Consensus       360 ~~sDGAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~  395 (441)
                      .++||++++||++.+.|++.|.++++.|.+++...+
T Consensus      1377 v~gEGag~vVL~~~~~A~~~G~~I~avI~g~a~~~D 1412 (1887)
T 2uv8_A         1377 MEAQGAGIQIIMQADLALKMGVPIYGIVAMAATATD 1412 (1887)
T ss_dssp             CBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEECC
T ss_pred             ccccceEEEEEccHHHHHHCCCceEEEEeeeEEecC
Confidence            479999999999999999999999999999997765

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=98.41  E-value=1.3e-07  Score=108.80  Aligned_cols=38  Identities=13%  Similarity=0.061  Sum_probs=33.4

Q ss_pred             CCCCCCCcEEEEEcCHHHHHhcCCCceEEEEEEEeecC
Q psy4157         358 ASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGV  395 (441)
Q Consensus       358 ~~~~sDGAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~  395 (441)
                      ...++|||+++||++.+.|++.|.++++.|.+++...+
T Consensus      1176 Gfv~GEGAGavVLesle~Al~~G~~IyAvI~GsavnsD 1213 (1688)
T 2pff_A         1176 GFMEAQGAGIQIIMQADLALKMGVPIYGIVAMAATATD 1213 (1688)
T ss_dssp             CCCCCSCCEEEEEECSHHHHSSSCCCCCEECCCCCCCC
T ss_pred             CCccccceEEEEeCcHHHHHHCCCceEEEEEEEEEECC
Confidence            34589999999999999999999999999999886654

>3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A

Probab=98.37  E-value=5.8e-07  Score=101.51  Aligned_cols=72  Identities=19%  Similarity=0.195  Sum_probs=58.5

Q ss_pred             CCCCCcEEEEEcCHHHHHhcCCCceEEEEEEEeecCCCCcCC------CChHHHHHHHHHHcCCCCCCccEEEecCCChh
Q psy4157         360 GINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMG------TGPIPAVNAVLAKAGWSKEEVGYFNRVATSGG  433 (441)
Q Consensus       360 ~~sDGAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~~p~~~~------~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~  433 (441)
                      ..+|||++|||.+.+.|+    ++++.|+|++...+......      .+...+++++|++|||+++|||++|.|.++|.
T Consensus       225 ~~gEGagavvL~~l~~A~----~i~a~I~g~~~n~dg~~~~~~t~P~~~~q~~~i~~Al~~Agl~p~dIdyvEaHgTgT~  300 (965)
T 3hhd_A          225 CRSEGVVAVLLTKKSLAR----RVYATILNAGTNTDGFKEQGVTFPSGDIQEQLIRSLYQSAGVAPESFEYIEAHGTGTK  300 (965)
T ss_dssp             CBBCEEEEEEEEEGGGCS----SCSEEEEEEEEEECCCCTTCTTSCCHHHHHHHHHHHHHHTTCCGGGEEEEECCCCCCT
T ss_pred             cccceEEEEEEecHHHcC----cccEEEEeeeccCCCCCCCCCcCCCHHHHHHHHHHHHHHhCCCHHHhccccccCCCCC
Confidence            469999999999998885    47899999997765433211      13468999999999999999999999999996


Q ss_pred             hh
Q psy4157         434 IA  435 (441)
Q Consensus       434 ~~  435 (441)
                      ++
T Consensus       301 ~g  302 (965)
T 3hhd_A          301 VG  302 (965)
T ss_dssp             TH
T ss_pred             CC
Confidence            43

>2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ...

Probab=98.32  E-value=6.4e-07  Score=91.60  Aligned_cols=76  Identities=20%  Similarity=0.313  Sum_probs=63.9

Q ss_pred             CCCCCCCCCcEEEEEcCHHHHHhcCCCceEEEEEEEeecCCCCcC---CCChHHHHHHHHHHcCCCCCCccEEEecCCCh
Q psy4157         356 GNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLM---GTGPIPAVNAVLAKAGWSKEEVGYFNRVATSG  432 (441)
Q Consensus       356 ~n~~~~sDGAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~~p~~~---~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft  432 (441)
                      .+++.++|||++|||.+++.|++.|.+++++|++++...+-....   ..+...+++++|+++|   +|||++|.|+++|
T Consensus       226 ~~G~v~gEGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~t~p~~~~~~~ai~~al~~ag---~dId~ve~HgtgT  302 (406)
T 2vba_A          226 RDGFVIAGGGGMVVVEELEHALARGAHIYAEIVGYGATSDGADMVAPSGEGAVRCMKMAMHGVD---TPIDYLNSHGTST  302 (406)
T ss_dssp             CCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCTTSCCSHHHHHHHHHHHTTCC---SCCCEEECCCCSC
T ss_pred             CCceEeeceEEEEEeCcHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCHHHHHHHHHHHHhhCC---CCccEEEeeCccC
Confidence            356779999999999999999999999999999999765422111   3356789999999999   8999999999999


Q ss_pred             hh
Q psy4157         433 GI  434 (441)
Q Consensus       433 ~~  434 (441)
                      .+
T Consensus       303 ~~  304 (406)
T 2vba_A          303 PV  304 (406)
T ss_dssp             HH
T ss_pred             cc
Confidence            75

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=98.31  E-value=5.2e-07  Score=111.16  Aligned_cols=75  Identities=17%  Similarity=0.121  Sum_probs=59.3

Q ss_pred             CCCCCCcEEEEEcCHHHHHhcCCCceEEEEEEEeecCCCCcCC-------------CChHHHHHHHHHHcCCCCCCccEE
Q psy4157         359 SGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMG-------------TGPIPAVNAVLAKAGWSKEEVGYF  425 (441)
Q Consensus       359 ~~~sDGAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~~p~~~~-------------~~~~~Aa~~al~~AGl~~~DID~~  425 (441)
                      ..++|||++|||.+.+.|++.|.++++.|.+.+.. .++..+.             .+...+++++|+++||+++|||++
T Consensus      2811 ~v~GEGAgavVL~~~e~A~~~G~~I~avI~g~~~n-~Dg~~~~~~aP~~g~~~a~~~~q~~ai~~AL~~AGl~p~DIdyV 2889 (3089)
T 3zen_D         2811 FLEAQGGGTILLARGDLALKMGLPVLAVVGYAQSF-ADGVHTSIPAPGLGALGAARGGRESTLARSLAQLGVGADDIAVI 2889 (3089)
T ss_dssp             BCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEE-CCCCCCCSSCCCCGGGGGSTTGGGSHHHHHHHTTTCCGGGEEEE
T ss_pred             EEEeccceEEEEeeHHHHHhCCCceEEEEEEEEEe-cCCcccCccCCchhHHhHhhhhHHHHHHHHHHHcCCCHHHeeEE
Confidence            44899999999999999999999999966666543 2222211             122358999999999999999999


Q ss_pred             EecCCChhh
Q psy4157         426 NRVATSGGI  434 (441)
Q Consensus       426 Ei~D~Ft~~  434 (441)
                      |.|+++|.+
T Consensus      2890 EaHGTGT~l 2898 (3089)
T 3zen_D         2890 SKHDTSTLA 2898 (3089)
T ss_dssp             ECCCCCCTT
T ss_pred             EEecCCccc
Confidence            999999864

>2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea}

Probab=98.24  E-value=1.6e-06  Score=97.51  Aligned_cols=80  Identities=16%  Similarity=0.208  Sum_probs=66.5

Q ss_pred             CCCCCCCCCcEEEEEcCHHHHHhcCCCceEEEEEEEeecCCCCc--C---CCChHHHHHHHHHHcCCCCCCccEEEecCC
Q psy4157         356 GNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTL--M---GTGPIPAVNAVLAKAGWSKEEVGYFNRVAT  430 (441)
Q Consensus       356 ~n~~~~sDGAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~~p~~--~---~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~  430 (441)
                      .+++.++|||++|||.+.+.|++.|.+++++|+|++...+....  .   ..+...+++++|++|||+++|||++|.|++
T Consensus       235 adG~v~gEGagavVL~~~~~A~~~g~~i~a~I~G~~~~~dg~~~~~~~p~~~~~~~~i~~Al~~Agl~p~dId~ve~Hgt  314 (915)
T 2qo3_A          235 ADGFGFSEGVTLVLLERLSEARRNGHEVLAVVRGSALNQDGASNGLSAPSGPAQRRVIRQALESCGLEPGDVDAVEAHGT  314 (915)
T ss_dssp             CCCBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSTTCCCHHHHHHHHHHHHHHTTCCGGGCCEEECCCC
T ss_pred             CCceeecCceEEEEEeEhHHhhhCCCCeEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCCHHHCcEEEecCC
Confidence            36778999999999999999999999889999999876532211  1   123568999999999999999999999999


Q ss_pred             Chhhh
Q psy4157         431 SGGIA  435 (441)
Q Consensus       431 Ft~~~  435 (441)
                      +|.+.
T Consensus       315 gT~~g  319 (915)
T 2qo3_A          315 GTALG  319 (915)
T ss_dssp             CCTTT
T ss_pred             CCccC
Confidence            98753

>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}

Probab=96.65  E-value=0.0012  Score=64.08  Aligned_cols=72  Identities=25%  Similarity=0.205  Sum_probs=48.2

Q ss_pred             CCCCCCCCcEEEEEcCHHHHHhcCCCceEEEEEEEee--cC------CCC--c-CCC----------ChHHHHHHHHHHc
Q psy4157         357 NASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSA--GV------EPT--L-MGT----------GPIPAVNAVLAKA  415 (441)
Q Consensus       357 n~~~~sDGAAAvVLaSe~~A~~lg~~p~a~I~~~~~~--~~------~p~--~-~~~----------~~~~Aa~~al~~A  415 (441)
                      +++.++|||+|+||.+++.++        .|.+....  +.      .|.  . ...          ....+++++|+++
T Consensus       152 ~~~~~gdGaaA~vL~~~~~~~--------~i~~~~~~~~g~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~i~~al~~a  223 (309)
T 2ebd_A          152 TCVLFGDGAGAVVVTRSEDKS--------DILATRMYAEGSLEELLHADNCGYIRMKGRELFKVAVRSMEEVCREVLEKA  223 (309)
T ss_dssp             TTTTBCEEEEEEEEEECSSSC--------EEEEEEEEECGGGGGGEEECTTCCEEECHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hccccccccEEEEEEecCCCC--------ceeEEEEEecCCccceeEeCCCCeEEEccHHHHHHHHHHHHHHHHHHHHHc
Confidence            356799999999998765321        12222211  10      010  0 001          2357899999999


Q ss_pred             CCCCCCccEEEecCCChhhhh
Q psy4157         416 GWSKEEVGYFNRVATSGGIAN  436 (441)
Q Consensus       416 Gl~~~DID~~Ei~D~Ft~~~~  436 (441)
                      |++++|||+++.|.+++.+.-
T Consensus       224 gl~~~did~~~~H~~~~~~~~  244 (309)
T 2ebd_A          224 GVKPEEVSLVIPHQANVRIIN  244 (309)
T ss_dssp             TCCGGGCSEEEECCSCHHHHH
T ss_pred             CCCHHHCCEEEEcCCCHHHHH
Confidence            999999999999999987643

>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A

Probab=96.35  E-value=0.001  Score=65.43  Aligned_cols=35  Identities=11%  Similarity=0.068  Sum_probs=30.9

Q ss_pred             HHHHHHHHHHcCCCCCCccEEEecCCChhhhhhhh
Q psy4157         405 IPAVNAVLAKAGWSKEEVGYFNRVATSGGIANRRQ  439 (441)
Q Consensus       405 ~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~~~~~~  439 (441)
                      ..+++++|+++|++++|||++++|++++.+.-...
T Consensus       235 ~~~i~~al~~agl~~~dId~~~~H~~~~~~~~~~~  269 (335)
T 1u6e_A          235 GDVGRRAMDAAGVRPDQIDVFVPHQANSRINELLV  269 (335)
T ss_dssp             HHHHHHHHHHHTCCGGGCCEEEECCSCHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCHHHCCEEEECCCCHHHHHHHH
Confidence            46899999999999999999999999998865543

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=96.06  E-value=0.0087  Score=73.84  Aligned_cols=72  Identities=18%  Similarity=0.158  Sum_probs=55.8

Q ss_pred             CCCCCCcEEEEEcCHHHHHhcCCCceEEEEEEEeecCCC---CcC-C--CChHHHHHHHHHHcCCCCCCccEEEecCCCh
Q psy4157         359 SGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEP---TLM-G--TGPIPAVNAVLAKAGWSKEEVGYFNRVATSG  432 (441)
Q Consensus       359 ~~~sDGAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~~p---~~~-~--~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft  432 (441)
                      -..++|+++|||-+.+.|+    +.++.|+|++...+-.   ... +  .+...+++++|++|||+|+|||++|-|-.=|
T Consensus       222 ~~~gEG~~~~vLk~l~~A~----~i~a~i~g~~~n~dg~~~~~~t~P~~~~q~~~i~~al~~ag~~p~~i~yveaHGTgT  297 (2512)
T 2vz8_A          222 YCRAEAVVAVLLTKKSLAR----RVYATILNAGTNTDGSKEQGVTFPSGDVQEQLIRSLYAPAGPDPESLEYIEAHGTGT  297 (2512)
T ss_dssp             BCBBCEEEEEEEEEGGGCS----CCSEEEEEEEEEECCCCTTCSSSCCHHHHHHHHHTTSGGGSSCTTSCCEEECCCCCC
T ss_pred             cceeeeEEEEEEEEHHHCC----cccEEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEeecCCC
Confidence            3578999999999888875    4789999998765431   122 1  2346799999999999999999999997665


Q ss_pred             hh
Q psy4157         433 GI  434 (441)
Q Consensus       433 ~~  434 (441)
                      .+
T Consensus       298 ~~  299 (2512)
T 2vz8_A          298 KV  299 (2512)
T ss_dssp             TT
T ss_pred             CC
Confidence            43

>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}

Probab=95.98  E-value=0.002  Score=72.47  Aligned_cols=79  Identities=14%  Similarity=0.037  Sum_probs=50.8

Q ss_pred             CCCCCCCcEEEEEcCHHHHHhcCCCceEEEEEEEeecCCCCcC-----CCC----------------hHHHHHHHHHHcC
Q psy4157         358 ASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLM-----GTG----------------PIPAVNAVLAKAG  416 (441)
Q Consensus       358 ~~~~sDGAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~~p~~~-----~~~----------------~~~Aa~~al~~AG  416 (441)
                      |+.++|||+|+||.+++.+...+........++..........     ..+                ...+++++|+++|
T Consensus       799 ~~lfGDGA~A~vL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~al~~ag  878 (979)
T 3tsy_A          799 QALFGDGSAAVIVGSDPDISIERPLFQLVSAAQTFIPNSAGAIAGNLREVGLTFHLWPNVPTLISENVEKCLTQAFDPLG  878 (979)
T ss_dssp             HHHBCCEEEEEEEESSCCSSSCCCCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHGGGT
T ss_pred             hhhccCceEEEEEecCCCccccCcceEEEeeeeEEecCchhheEEEEecCceEEEEchHHHHHHHHHHHHHHHHHHhhcC
Confidence            4567999999999987654433322222333333222111000     001                3578999999999


Q ss_pred             CCCCCccEEEecCCChhhhh
Q psy4157         417 WSKEEVGYFNRVATSGGIAN  436 (441)
Q Consensus       417 l~~~DID~~Ei~D~Ft~~~~  436 (441)
                      ++++|||+|.+|-...-+.-
T Consensus       879 l~~~did~~~~Hq~~~~i~~  898 (979)
T 3tsy_A          879 ISDWNSLFWIAHPGGPAILD  898 (979)
T ss_dssp             CCCGGGSEEEECCSCHHHHH
T ss_pred             CCCcccceEEECCCChHHHH
Confidence            99999999999998876643

>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A

Probab=95.96  E-value=0.0029  Score=61.54  Aligned_cols=34  Identities=18%  Similarity=0.154  Sum_probs=29.7

Q ss_pred             hHHHHHHHHHHcCCCCCCccEEEecCCChhhhhh
Q psy4157         404 PIPAVNAVLAKAGWSKEEVGYFNRVATSGGIANR  437 (441)
Q Consensus       404 ~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~~~~  437 (441)
                      ...+++++|+++|++++|||+++.|.+++.+.-.
T Consensus       214 ~~~~i~~al~~agl~~~did~~~~H~~~~~~~d~  247 (313)
T 1zow_A          214 MGDASTRVVEKANLTSDDIDLFIPHQANIRIMES  247 (313)
T ss_dssp             HHHHHHHHHHHTTCCGGGCSEEEECCSCHHHHHH
T ss_pred             HHHHHHHHHHHcCCCHHHCCEEEEcCCCHHHHHH
Confidence            3568999999999999999999999999876543

>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A

Probab=95.82  E-value=0.0012  Score=65.74  Aligned_cols=27  Identities=19%  Similarity=0.174  Sum_probs=24.2

Q ss_pred             hhhHHhhhcCeeEEEEeecccCCCCcc
Q psy4157         210 LARIAIKSGDATAIVAGGQECMSQAPH  236 (441)
Q Consensus       210 ~A~~~I~sG~advvla~G~E~ms~~P~  236 (441)
                      +|+..|.+|.++.||++|.|+|+..+.
T Consensus       119 ~Aa~~I~sG~~~~VLVVGaE~~S~aer  145 (347)
T 3lma_A          119 ISSALIDGGFAKRALAATSSHNATAER  145 (347)
T ss_dssp             HHHHHHHTTSCSEEEEEEEECGGGTTC
T ss_pred             HHHHHHhcCCCCEEEEEEeccccchhh
Confidence            688899999999999999999987654

>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2

Probab=95.46  E-value=0.0074  Score=58.88  Aligned_cols=32  Identities=22%  Similarity=0.200  Sum_probs=28.5

Q ss_pred             hHHHHHHHHHHcCCCCCCccEEEecCCChhhh
Q psy4157         404 PIPAVNAVLAKAGWSKEEVGYFNRVATSGGIA  435 (441)
Q Consensus       404 ~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~~  435 (441)
                      ...+++++|+++|++++|||+++.|...+.+.
T Consensus       222 ~~~~i~~al~~agl~~~did~~~~H~~~~~~~  253 (322)
T 1ub7_A          222 MNTATLEAIEKAGLTPEDIRLFVPHQANLRII  253 (322)
T ss_dssp             HHHHHHHHHHHHTCCGGGCSEEEECCSCHHHH
T ss_pred             HHHHHHHHHHHcCCCHHHCCEEEEcCCCHHHH
Confidence            45689999999999999999999999987654

>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A

Probab=94.78  E-value=0.0077  Score=60.85  Aligned_cols=76  Identities=16%  Similarity=0.154  Sum_probs=50.2

Q ss_pred             CCCCCCcEEEEEcCHHHHHhcCCCceEEEEEEEee-cCCCCc--------------CC--------CChHHHHHHHHHHc
Q psy4157         359 SGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSA-GVEPTL--------------MG--------TGPIPAVNAVLAKA  415 (441)
Q Consensus       359 ~~~sDGAAAvVLaSe~~A~~lg~~p~a~I~~~~~~-~~~p~~--------------~~--------~~~~~Aa~~al~~A  415 (441)
                      +..+|||+|+||.+.+.+...+ ..+++|.+++.. ..+...              .+        .....+++++|+++
T Consensus       222 ~lfGDGA~A~vL~~~~~~~~~~-~~~~~i~~~~~~~~~d~~~~~~~~~~~~g~~~~~g~~v~~~~~~~~~~~i~~aL~~a  300 (393)
T 1ted_A          222 SLFGDGCAALVIGASQVQEKLE-PGKVVVRSSFSQLLDNTEDGIVLGVNHNGITCELSENLPGYIFSGVAPVVTEMLWDN  300 (393)
T ss_dssp             HHBCEEEEEEEEEEECTTSCCC-TTCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHT
T ss_pred             hhhcCccEEEEEecCCCccccC-cceeeeeccceEEcCCchhhccceecCCCeEEecCchHHHHHHHHHHHHHHHHHHHc
Confidence            4589999999997665331111 134577776543 111100              01        01245789999999


Q ss_pred             CCCCCCccEEEecCCChhhh
Q psy4157         416 GWSKEEVGYFNRVATSGGIA  435 (441)
Q Consensus       416 Gl~~~DID~~Ei~D~Ft~~~  435 (441)
                      |++++|||+|.+|-..+.+.
T Consensus       301 gl~~~dId~~~~H~~~~~i~  320 (393)
T 1ted_A          301 GLQISDIDLWAIHPGGPKII  320 (393)
T ss_dssp             TCCGGGCSCEEECCSCHHHH
T ss_pred             CCCHhHCCEEEECCCcHHHH
Confidence            99999999999999987764

>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*

Probab=94.18  E-value=0.024  Score=55.10  Aligned_cols=31  Identities=13%  Similarity=0.168  Sum_probs=27.4

Q ss_pred             HHHHHHHHHHcCCCCCCccEEEecCCChhhh
Q psy4157         405 IPAVNAVLAKAGWSKEEVGYFNRVATSGGIA  435 (441)
Q Consensus       405 ~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~~  435 (441)
                      ..+++++|+++|++++|||+++.|-..+.+.
T Consensus       221 ~~~i~~aL~~agl~~~did~v~~H~~~~~~~  251 (317)
T 1hnj_A          221 AHIVDETLAANNLDRSQLDWLVPHQANLRII  251 (317)
T ss_dssp             HHHHHHHHHHTTCCGGGCCEEEECCSCHHHH
T ss_pred             HHHHHHHHHHcCCCHHHCCEEEEcCCCHHHH
Confidence            5689999999999999999999998876553

>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2

Probab=93.86  E-value=0.031  Score=56.11  Aligned_cols=29  Identities=17%  Similarity=0.432  Sum_probs=26.8

Q ss_pred             HHHHHHHHcCCCCCCccEEEecCCChhhh
Q psy4157         407 AVNAVLAKAGWSKEEVGYFNRVATSGGIA  435 (441)
Q Consensus       407 Aa~~al~~AGl~~~DID~~Ei~D~Ft~~~  435 (441)
                      +++++|+++|++++|||+|..|-.++.+.
T Consensus       257 ~i~~aL~~agl~~~dId~v~~H~~~~~i~  285 (382)
T 1u0m_A          257 ALKELAGEHGWDASDLDFYIVHAGGPRIL  285 (382)
T ss_dssp             HHHHHHHTTSCCSSCCSCCEEECSHHHHH
T ss_pred             HHHHHHHHcCCCHHHCCEEEECCCCHHHH
Confidence            88999999999999999999999987654

>2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum}

Probab=93.58  E-value=0.025  Score=56.44  Aligned_cols=73  Identities=21%  Similarity=0.249  Sum_probs=48.5

Q ss_pred             CCCCCCcEEEEEcCHHHHHhcCCCceEEEEEEEeecC-----------CCCc----CC--------CChHHHHHHHHHHc
Q psy4157         359 SGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGV-----------EPTL----MG--------TGPIPAVNAVLAKA  415 (441)
Q Consensus       359 ~~~sDGAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~-----------~p~~----~~--------~~~~~Aa~~al~~A  415 (441)
                      ...+|||+|+||.+.+.+++   .+..++.+++....           .+..    +.        .....+++++|+++
T Consensus       204 ~lfGDGA~A~vL~~~~~~~~---~~~~~l~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~a  280 (374)
T 2h84_A          204 SIFADGSAAYIIGCNPRIEE---TPLYEVMCSINRSFPNTENAMVWDLEKEGWNLGLDASIPIVIGSGIEAFVDTLLDKA  280 (374)
T ss_dssp             HHBCCEEEEEEEESSCCTTC---CCCEEEEEEEEEECSSCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhccCcEEEEEecCCCccc---CCceeEEeeeeEEeCCCcccceeEEecCcEEEEeCchHHHHHHHHHHHHHHHHHHhc
Confidence            45899999999987654421   12346666554311           0000    00        12345888999999


Q ss_pred             C------CCCCCccEEEecCCChhhh
Q psy4157         416 G------WSKEEVGYFNRVATSGGIA  435 (441)
Q Consensus       416 G------l~~~DID~~Ei~D~Ft~~~  435 (441)
                      |      ++++|||+| +|-..+.+.
T Consensus       281 g~~~~~~l~~~did~~-~H~~~~~i~  305 (374)
T 2h84_A          281 KLQTSTAISAKDCEFL-IHTGGKSIL  305 (374)
T ss_dssp             TTTSCSCCCSSSSEEE-ECCCCHHHH
T ss_pred             CCccccCCChhhcCEe-ECCCCHHHH
Confidence            9      999999999 999987654

>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}

Probab=93.48  E-value=0.028  Score=55.07  Aligned_cols=31  Identities=19%  Similarity=0.348  Sum_probs=27.7

Q ss_pred             HHHHHHHHHHcCCCCCCccEEEecCCChhhh
Q psy4157         405 IPAVNAVLAKAGWSKEEVGYFNRVATSGGIA  435 (441)
Q Consensus       405 ~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~~  435 (441)
                      ..+++++|+++|++++|||+|..|-..+.+.
T Consensus       227 ~~~i~~aL~~agl~~~did~~~~H~~~~~~~  257 (331)
T 2x3e_A          227 SDSVRRVLDRVGWQASDLHHLVPHQANTRIL  257 (331)
T ss_dssp             HHHHHHHHHHHTCCGGGCSEEEECCCCHHHH
T ss_pred             HHHHHHHHHHcCCCHHHCCEEEEcCCCHHHH
Confidence            4689999999999999999999999887654

>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}

Probab=92.10  E-value=0.096  Score=51.40  Aligned_cols=31  Identities=19%  Similarity=0.152  Sum_probs=26.8

Q ss_pred             HHHHHHHHHHcCCCCCCccEEEecCCChhhh
Q psy4157         405 IPAVNAVLAKAGWSKEEVGYFNRVATSGGIA  435 (441)
Q Consensus       405 ~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~~  435 (441)
                      ..+++++|+++|++++|||.|.+|-...-+.
T Consensus       237 ~~~i~~~l~~~gl~~~did~~~~Hq~~~~i~  267 (333)
T 4dfe_A          237 EKVAVEALEKANLSAEQIDWLIPHQANIRIM  267 (333)
T ss_dssp             HHHHHHHHHHTTCCGGGCSEEEECCSCHHHH
T ss_pred             HHHHHHHHHHcCCCHHHCCEEEEcCCCHHHH
Confidence            3578899999999999999999998876553

>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2

Probab=91.40  E-value=0.068  Score=52.49  Aligned_cols=31  Identities=23%  Similarity=0.240  Sum_probs=27.0

Q ss_pred             hHHHHHHHHHHcCCCCCCccEEEecCCChhh
Q psy4157         404 PIPAVNAVLAKAGWSKEEVGYFNRVATSGGI  434 (441)
Q Consensus       404 ~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~  434 (441)
                      ...+++++|+++|++++|||+|+.|-..+.+
T Consensus       233 ~~~~i~~aL~~agl~~~did~v~~H~~~~~~  263 (339)
T 1mzj_A          233 VVPAAREALEVAGLTVGDLVAFVPHQANLRI  263 (339)
T ss_dssp             HHHHHHHHHHTTTCCGGGCSEEEECCSCHHH
T ss_pred             HHHHHHHHHHHcCCCHHHCCEEEECCCCHHH
Confidence            3468999999999999999999999877654

>1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A*

Probab=89.70  E-value=0.2  Score=50.57  Aligned_cols=31  Identities=10%  Similarity=-0.021  Sum_probs=27.7

Q ss_pred             HHHHHHHHHHcCCCCCCccEEEecCCChhhh
Q psy4157         405 IPAVNAVLAKAGWSKEEVGYFNRVATSGGIA  435 (441)
Q Consensus       405 ~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~~  435 (441)
                      ..+++++|+++|++++|||++=.|-+++.+.
T Consensus       210 ~~~~~~~L~~agl~~~did~~~~H~~~~~~~  240 (396)
T 1xpm_A          210 QQSWNEYAKRQGKSLADFASLCFHVPFTKMG  240 (396)
T ss_dssp             HHHHHHHHHHHTCCGGGCSEEEECCSSHHHH
T ss_pred             HHHHHHHHHHcCCCHHHCCEEEecCCchHHH
Confidence            4689999999999999999999999987653

>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae}

Probab=85.49  E-value=1.2  Score=43.46  Aligned_cols=30  Identities=13%  Similarity=0.168  Sum_probs=25.5

Q ss_pred             HHHHHHHHHcCCCCCCccEEEecCCChhhh
Q psy4157         406 PAVNAVLAKAGWSKEEVGYFNRVATSGGIA  435 (441)
Q Consensus       406 ~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~~  435 (441)
                      .+++++|+++|++++|||.|=+|-...-+.
T Consensus       228 ~~i~~~l~~~gl~~~did~~v~Hq~~~~i~  257 (323)
T 3il3_A          228 NVVEETLLANNLDKKDLDWLVPHQANLRII  257 (323)
T ss_dssp             HHHHHHHHTTTCCTTTCCEEEECCSCHHHH
T ss_pred             HHHHHHHHHcCCCHHHCCEEEEcCCCHHHH
Confidence            467899999999999999999998776543

>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A

Probab=85.21  E-value=0.61  Score=45.85  Aligned_cols=72  Identities=18%  Similarity=0.175  Sum_probs=44.7

Q ss_pred             CCCCCCCcEEEEEcCHHHHHhcCCCceEEEEEEEeecCC--CC--------cCCCC----------hHHHHHHHHHHcCC
Q psy4157         358 ASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVE--PT--------LMGTG----------PIPAVNAVLAKAGW  417 (441)
Q Consensus       358 ~~~~sDGAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~~--p~--------~~~~~----------~~~Aa~~al~~AGl  417 (441)
                      +...+|||+|+||...+...  +   ..+|.+.......  ..        ....+          ...+++++|+++|+
T Consensus       187 ~~~~GdGA~A~vl~~~~~~~--~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl  261 (345)
T 3s21_A          187 ALTLGCGAAAMVMARSELVP--D---APRYKGGVTRSATEWNKLCRGNLDRMVTDTRLLLIEGIKLAQKTFVAAKQVLGW  261 (345)
T ss_dssp             GGGBCCEEEEEEEEEGGGST--T---SCEEEEEEEEECGGGTTC-----------CHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred             ceeeccceeEEEEecCCCCC--C---CcceeeeccccCcchhhhccccCcceEEcHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence            34689999999998765311  1   1234444332210  00        00011          12467899999999


Q ss_pred             CCCCccEEEecCCChhh
Q psy4157         418 SKEEVGYFNRVATSGGI  434 (441)
Q Consensus       418 ~~~DID~~Ei~D~Ft~~  434 (441)
                      +++|||.|.+|-....+
T Consensus       262 ~~~did~~v~Hq~~~~i  278 (345)
T 3s21_A          262 AVEELDQFVIHQVSRPH  278 (345)
T ss_dssp             CGGGCSEEEECCSCHHH
T ss_pred             CHHHCCEEEeCCCCHHH
Confidence            99999999999876554

>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris}

Probab=83.47  E-value=0.78  Score=46.18  Aligned_cols=28  Identities=4%  Similarity=-0.117  Sum_probs=23.9

Q ss_pred             HHHHHHHHHcCCCCCCccEEEecCCChh
Q psy4157         406 PAVNAVLAKAGWSKEEVGYFNRVATSGG  433 (441)
Q Consensus       406 ~Aa~~al~~AGl~~~DID~~Ei~D~Ft~  433 (441)
                      .+++++|+++|++++|||.|=+|-.-.-
T Consensus       295 ~~i~~~L~~~gl~~~dId~~v~Hqan~~  322 (392)
T 3led_A          295 EMIIEHAREIGIDPHGLKRMWLHQANIN  322 (392)
T ss_dssp             HHHHHHHHHTTCCGGGCSEEEECSSCHH
T ss_pred             HHHHHHHHHcCCCHHHCcEEEEcCCCHH
Confidence            4688999999999999999988876543

>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B*

Probab=80.08  E-value=1.2  Score=44.21  Aligned_cols=25  Identities=24%  Similarity=0.209  Sum_probs=21.5

Q ss_pred             HHHHHHHHHcCCCCCCccEEEe-cCC
Q psy4157         406 PAVNAVLAKAGWSKEEVGYFNR-VAT  430 (441)
Q Consensus       406 ~Aa~~al~~AGl~~~DID~~Ei-~D~  430 (441)
                      .+++++|+++|++++|||.|=+ |-.
T Consensus       242 ~~i~~~L~~~gl~~~did~~v~~hq~  267 (357)
T 3s3l_A          242 AAKTQALEDAGTAIEDIAHAVIPVSR  267 (357)
T ss_dssp             HHHHHHHHHTTCCGGGCSEEECCSCC
T ss_pred             HHHHHHHHHcCCCHHHCCEEEecCcC
Confidence            4788999999999999999986 543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	441
d1m3ka1	268	c.95.1.1 (A:1-268) Biosynthetic thiolase {Zoogloea	4e-56
d1m3ka1	268	c.95.1.1 (A:1-268) Biosynthetic thiolase {Zoogloea	4e-47
d1m3ka1	268	c.95.1.1 (A:1-268) Biosynthetic thiolase {Zoogloea	1e-22
d1ulqa1	273	c.95.1.1 (A:3-275) Beta-ketoadipyl CoA thiolase {T	1e-40
d1ulqa1	273	c.95.1.1 (A:3-275) Beta-ketoadipyl CoA thiolase {T	5e-30
d1ulqa1	273	c.95.1.1 (A:3-275) Beta-ketoadipyl CoA thiolase {T	3e-22
d1afwa1	269	c.95.1.1 (A:25-293) Thiolase {Baker's yeast (Sacch	2e-33
d1afwa1	269	c.95.1.1 (A:25-293) Thiolase {Baker's yeast (Sacch	2e-27
d1afwa1	269	c.95.1.1 (A:25-293) Thiolase {Baker's yeast (Sacch	3e-20
d1wdkc1	262	c.95.1.1 (C:2-263) Fatty oxidation complex beta su	4e-30
d1wdkc1	262	c.95.1.1 (C:2-263) Fatty oxidation complex beta su	9e-23
d1wdkc1	262	c.95.1.1 (C:2-263) Fatty oxidation complex beta su	4e-19
d1m3ka2	124	c.95.1.1 (A:269-392) Biosynthetic thiolase {Zooglo	5e-11
d1afwa2	124	c.95.1.1 (A:294-417) Thiolase {Baker's yeast (Sacc	2e-10
d1wdkc2	128	c.95.1.1 (C:264-391) Fatty oxidation complex beta	4e-09
d1ulqa2	125	c.95.1.1 (A:276-400) Beta-ketoadipyl CoA thiolase	7e-09

>d1m3ka1 c.95.1.1 (A:1-268) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} Length = 268

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Biosynthetic thiolase
species: Zoogloea ramigera [TaxId: 350]

 Score =  184 bits (469), Expect = 4e-56
 Identities = 99/199 (49%), Positives = 130/199 (65%), Gaps = 1/199 (0%)

Query: 181 AGNASGINDGAAAVLLMSYKRAQARNIQPLARIAIKSGDATAIVAGGQECMSQAPHVINI 240
           A   +G+   A A  +     +  R +  L    I +GDA+ IVAGG E MS APH  ++
Sbjct: 70  AAMKAGVPQEATAWGMNQLAGSGLRAV-ALGMQQIATGDASIIVAGGMESMSMAPHCAHL 128

Query: 241 RNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAK 300
           R G+K+ D +M D+M+ DGLTDAF+  HMG TAEN+AK+W +SR EQD +A  SQ K   
Sbjct: 129 RGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDAFAVASQNKAEA 188

Query: 301 AQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASG 360
           AQ+ G F +EIVP ++  RKGD+ V  DEY +   T++++ KLRP F K+GTVTAGNASG
Sbjct: 189 AQKDGRFKDEIVPFIVKGRKGDITVDADEYIRHGATLDSMAKLRPAFDKEGTVTAGNASG 248

Query: 361 INDGAAAVLLMSYKTAQAR 379
           +NDGAAA LLMS   A  R
Sbjct: 249 LNDGAAAALLMSEAEASRR 267

>d1m3ka1 c.95.1.1 (A:1-268) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} Length = 268

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Biosynthetic thiolase
species: Zoogloea ramigera [TaxId: 350]

 Score =  161 bits (407), Expect = 4e-47
 Identities = 77/137 (56%), Positives = 101/137 (73%)

Query: 1   MSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEY 60
           MS APH  ++R G+K+ D +M D+M+ DGLTDAF+  HMG TAEN+AK+W +SR EQD +
Sbjct: 119 MSMAPHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDAF 178

Query: 61  AYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTSVDALQKLRPVFQKD 120
           A  SQ K   AQ+ G F +EIVP ++  RKGD+ V  DEY +   ++D++ KLRP F K+
Sbjct: 179 AVASQNKAEAAQKDGRFKDEIVPFIVKGRKGDITVDADEYIRHGATLDSMAKLRPAFDKE 238

Query: 121 GTVTAGNASGINDGAAA 137
           GTVTAGNASG+NDGAAA
Sbjct: 239 GTVTAGNASGLNDGAAA 255

>d1m3ka1 c.95.1.1 (A:1-268) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} Length = 268

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Biosynthetic thiolase
species: Zoogloea ramigera [TaxId: 350]

 Score = 94.4 bits (234), Expect = 1e-22
 Identities = 37/62 (59%), Positives = 45/62 (72%)

Query: 144 TRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQ 203
            RKGD+ V  DEY +   T++++ KLRP F K+GTVTAGNASG+NDGAAA LLMS   A 
Sbjct: 206 GRKGDITVDADEYIRHGATLDSMAKLRPAFDKEGTVTAGNASGLNDGAAAALLMSEAEAS 265

Query: 204 AR 205
            R
Sbjct: 266 RR 267

>d1ulqa1 c.95.1.1 (A:3-275) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} Length = 273

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoadipyl CoA thiolase
species: Thermus thermophilus [TaxId: 274]

 Score =  144 bits (363), Expect = 1e-40
 Identities = 73/207 (35%), Positives = 110/207 (53%), Gaps = 7/207 (3%)

Query: 181 AGNASGINDGAAAVLLMSYKRAQARNIQPLARIAIKSGDATAIVAGGQECMSQAPHVI-N 239
           A   +G     A   +     +    +   A  AI +G+    +  G E MS+AP+ +  
Sbjct: 68  ALLLAGFPVEVAGCTVNRLCGSGLEAVA-QAARAIWAGEGKVYIGSGVESMSRAPYAVPK 126

Query: 240 IRNGIKLNDAEMKDS-----MVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEYAYQS 294
              G    +  M D+      V   +   +    MG TAEN+A+ + I R EQD +A  S
Sbjct: 127 PERGFPTGNLVMYDTTLGWRFVNPKMQALYGTESMGETAENLAEMYGIRREEQDRFALLS 186

Query: 295 QVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVT 354
             K  +A E G F +E+VPV +   K +++V +DE P+ +T++E L  LRPVF++ GTVT
Sbjct: 187 HQKAVRAWEEGRFQDEVVPVPVKRGKEEILVEQDEGPRRDTSLEKLAALRPVFREGGTVT 246

Query: 355 AGNASGINDGAAAVLLMSYKTAQARNI 381
           AGN+S +NDGAAAVLL+S   A+A  +
Sbjct: 247 AGNSSPLNDGAAAVLLVSDDYAKAHGL 273

>d1ulqa1 c.95.1.1 (A:3-275) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} Length = 273

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoadipyl CoA thiolase
species: Thermus thermophilus [TaxId: 274]

 Score =  115 bits (288), Expect = 5e-30
 Identities = 63/166 (37%), Positives = 94/166 (56%), Gaps = 17/166 (10%)

Query: 1   MSQAPHVI-NIRNGIKLNDAEMKDS-----MVFDGLTDAFHNIHMGITAENIAKKWSISR 54
           MS+AP+ +     G    +  M D+      V   +   +    MG TAEN+A+ + I R
Sbjct: 117 MSRAPYAVPKPERGFPTGNLVMYDTTLGWRFVNPKMQALYGTESMGETAENLAEMYGIRR 176

Query: 55  LEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTSVDALQKLR 114
            EQD +A  S  K  +A E G F +E+VPV +   K +++V +DE P+ +TS++ L  LR
Sbjct: 177 EEQDRFALLSHQKAVRAWEEGRFQDEVVPVPVKRGKEEILVEQDEGPRRDTSLEKLAALR 236

Query: 115 PVFQKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEYPKAN 160
           PVF++ GTVTAGN+S +NDGAAA           V++  D+Y KA+
Sbjct: 237 PVFREGGTVTAGNSSPLNDGAAA-----------VLLVSDDYAKAH 271

>d1ulqa1 c.95.1.1 (A:3-275) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} Length = 273

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoadipyl CoA thiolase
species: Thermus thermophilus [TaxId: 274]

 Score = 94.1 bits (233), Expect = 3e-22
 Identities = 33/65 (50%), Positives = 48/65 (73%)

Query: 143 FTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKRA 202
              K +++V +DE P+ +T++E L  LRPVF++ GTVTAGN+S +NDGAAAVLL+S   A
Sbjct: 209 KRGKEEILVEQDEGPRRDTSLEKLAALRPVFREGGTVTAGNSSPLNDGAAAVLLVSDDYA 268

Query: 203 QARNI 207
           +A  +
Sbjct: 269 KAHGL 273

>d1afwa1 c.95.1.1 (A:25-293) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 269

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Thiolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  124 bits (313), Expect = 2e-33
 Identities = 59/165 (35%), Positives = 80/165 (48%), Gaps = 11/165 (6%)

Query: 214 AIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITA 273
            IK G     +A G E M+     +N           +    +          I MGIT 
Sbjct: 114 KIKVGQIDIGLALGVESMTNNYKNVNPLGM-------ISSEELQKNREAKKCLIPMGITN 166

Query: 274 ENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKA 333
           EN+A  + ISR +QDE+A  S  K  KA+  G F++EI+P+ +       +   DE P+ 
Sbjct: 167 ENVAANFKISRKDQDEFAANSYQKAYKAKNEGLFEDEILPIKLPDGS---ICQSDEGPRP 223

Query: 334 NTTVEALQKLRPVFQKD-GTVTAGNASGINDGAAAVLLMSYKTAQ 377
           N T E+L  +RP F KD GT TAGNAS ++DG A VLL     A 
Sbjct: 224 NVTAESLSSIRPAFIKDRGTTTAGNASQVSDGVAGVLLARRSVAN 268

>d1afwa1 c.95.1.1 (A:25-293) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 269

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Thiolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  108 bits (270), Expect = 2e-27
 Identities = 45/118 (38%), Positives = 65/118 (55%), Gaps = 4/118 (3%)

Query: 21  MKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEE 80
           +    +          I MGIT EN+A  + ISR +QDE+A  S  K  KA+  G F++E
Sbjct: 144 ISSEELQKNREAKKCLIPMGITNENVAANFKISRKDQDEFAANSYQKAYKAKNEGLFEDE 203

Query: 81  IVPVVISTRKGDVVVAKDEYPKANTSVDALQKLRPVFQKD-GTVTAGNASGINDGAAA 137
           I+P+ +       +   DE P+ N + ++L  +RP F KD GT TAGNAS ++DG A 
Sbjct: 204 ILPIKLPDGS---ICQSDEGPRPNVTAESLSSIRPAFIKDRGTTTAGNASQVSDGVAG 258

>d1afwa1 c.95.1.1 (A:25-293) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 269

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Thiolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 87.6 bits (216), Expect = 3e-20
 Identities = 27/55 (49%), Positives = 33/55 (60%), Gaps = 1/55 (1%)

Query: 150 VVAKDEYPKANTTVEALQKLRPVFQKD-GTVTAGNASGINDGAAAVLLMSYKRAQ 203
           +   DE P+ N T E+L  +RP F KD GT TAGNAS ++DG A VLL     A 
Sbjct: 214 ICQSDEGPRPNVTAESLSSIRPAFIKDRGTTTAGNASQVSDGVAGVLLARRSVAN 268

>d1wdkc1 c.95.1.1 (C:2-263) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} Length = 262

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase)
species: Pseudomonas fragi [TaxId: 296]

 Score =  115 bits (288), Expect = 4e-30
 Identities = 57/170 (33%), Positives = 83/170 (48%), Gaps = 14/170 (8%)

Query: 211 ARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMG 270
           A  AI +G+    V GG E M     +               D      L  A  +  MG
Sbjct: 104 AAQAIMTGNGDVFVVGGVEHMGHVSMMH------------GVDPNPHMSLYAAKASGMMG 151

Query: 271 ITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVA-KDE 329
           +TAE + K   ISR +QD +A +S     KA   G F +EI+P+      G + +   DE
Sbjct: 152 LTAEMLGKMHGISREQQDAFAVRSHQLAHKATVEGKFKDEIIPMQGYDENGFLKIFDYDE 211

Query: 330 YPKANTTVEALQKLRPVFQ-KDGTVTAGNASGINDGAAAVLLMSYKTAQA 378
             + +TT+E+L  L+P F  K GTVTAG +S I DGA+ +++MS + A+ 
Sbjct: 212 TIRPDTTLESLAALKPAFNPKGGTVTAGTSSQITDGASCMIVMSAQRAKD 261

>d1wdkc1 c.95.1.1 (C:2-263) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} Length = 262

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase)
species: Pseudomonas fragi [TaxId: 296]

 Score = 95.0 bits (235), Expect = 9e-23
 Identities = 43/119 (36%), Positives = 63/119 (52%), Gaps = 2/119 (1%)

Query: 21  MKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEE 80
             D      L  A  +  MG+TAE + K   ISR +QD +A +S     KA   G F +E
Sbjct: 132 GVDPNPHMSLYAAKASGMMGLTAEMLGKMHGISREQQDAFAVRSHQLAHKATVEGKFKDE 191

Query: 81  IVPVVISTRKGDVVVA-KDEYPKANTSVDALQKLRPVFQ-KDGTVTAGNASGINDGAAA 137
           I+P+      G + +   DE  + +T++++L  L+P F  K GTVTAG +S I DGA+ 
Sbjct: 192 IIPMQGYDENGFLKIFDYDETIRPDTTLESLAALKPAFNPKGGTVTAGTSSQITDGASC 250

>d1wdkc1 c.95.1.1 (C:2-263) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} Length = 262

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase)
species: Pseudomonas fragi [TaxId: 296]

 Score = 84.6 bits (208), Expect = 4e-19
 Identities = 25/52 (48%), Positives = 37/52 (71%), Gaps = 1/52 (1%)

Query: 154 DEYPKANTTVEALQKLRPVFQ-KDGTVTAGNASGINDGAAAVLLMSYKRAQA 204
           DE  + +TT+E+L  L+P F  K GTVTAG +S I DGA+ +++MS +RA+ 
Sbjct: 210 DETIRPDTTLESLAALKPAFNPKGGTVTAGTSSQITDGASCMIVMSAQRAKD 261

>d1m3ka2 c.95.1.1 (A:269-392) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} Length = 124

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Biosynthetic thiolase
species: Zoogloea ramigera [TaxId: 350]

 Score = 57.6 bits (139), Expect = 5e-11
 Identities = 22/45 (48%), Positives = 30/45 (66%)

Query: 381 IQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYF 425
           IQPL RIV+ ++ GV+P +MGTGPIPA    L +AGW   ++   
Sbjct: 1   IQPLGRIVSWATVGVDPKVMGTGPIPASRKALERAGWKIGDLDLV 45

>d1afwa2 c.95.1.1 (A:294-417) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 124

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Thiolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 56.5 bits (136), Expect = 2e-10
 Identities = 15/46 (32%), Positives = 23/46 (50%)

Query: 380 NIQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYF 425
           N+  L R +   + GV P +MG GP  A+  VL   G   +++  F
Sbjct: 2   NLPVLGRYIDFQTVGVPPEIMGVGPAYAIPKVLEATGLQVQDIDIF 47

>d1wdkc2 c.95.1.1 (C:264-391) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} Length = 128

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase)
species: Pseudomonas fragi [TaxId: 296]

 Score = 52.4 bits (125), Expect = 4e-09
 Identities = 18/45 (40%), Positives = 30/45 (66%)

Query: 381 IQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYF 425
           ++PLA I +M+ AGV+P +MG GP+PA    L +AG +  ++ + 
Sbjct: 2   LEPLAVIRSMAVAGVDPAIMGYGPVPATQKALKRAGLNMADIDFI 46

>d1ulqa2 c.95.1.1 (A:276-400) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} Length = 125

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoadipyl CoA thiolase
species: Thermus thermophilus [TaxId: 274]

 Score = 51.5 bits (123), Expect = 7e-09
 Identities = 20/43 (46%), Positives = 28/43 (65%)

Query: 383 PLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYF 425
           PLAR+ A++ AGV P +MG GP+PA    L +AG S  ++G  
Sbjct: 2   PLARVRAIAVAGVPPRIMGIGPVPATRKALERAGLSFSDLGLI 44

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	441
d1m3ka1	268	Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3	100.0
d1ulqa1	273	Beta-ketoadipyl CoA thiolase {Thermus thermophilus	100.0
d1m3ka1	268	Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3	100.0
d1ulqa1	273	Beta-ketoadipyl CoA thiolase {Thermus thermophilus	100.0
d1wdkc1	262	Fatty oxidation complex beta subunit (3-ketoacyl-C	99.97
d1wdkc1	262	Fatty oxidation complex beta subunit (3-ketoacyl-C	99.97
d1afwa1	269	Thiolase {Baker's yeast (Saccharomyces cerevisiae)	99.97
d1afwa1	269	Thiolase {Baker's yeast (Saccharomyces cerevisiae)	99.96
d1afwa2	124	Thiolase {Baker's yeast (Saccharomyces cerevisiae)	99.33
d1m3ka2	124	Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3	99.26
d1wdkc2	128	Fatty oxidation complex beta subunit (3-ketoacyl-C	99.24
d1ulqa2	125	Beta-ketoadipyl CoA thiolase {Thermus thermophilus	99.21
d1tqyb2	194	Actinorhodin polyketide putative beta-ketoacyl syn	97.75
d1tqya2	205	Actinorhodin polyketide putative beta-ketoacyl syn	97.73
d1ox0a2	158	Beta-ketoacyl-ACP synthase II {Streptococcus pneum	95.02
d1e5ma2	161	Beta-ketoacyl-ACP synthase II {Synechocystis sp. [	94.47
d1j3na2	159	Beta-ketoacyl-ACP synthase II {Thermus thermophilu	94.43
d2ix4a2	161	Beta-ketoacyl-ACP synthase II {Thale cress (Arabid	93.7
d2gfva2	161	Beta-ketoacyl-ACP synthase II {Escherichia coli [T	93.47
d1afwa2	124	Thiolase {Baker's yeast (Saccharomyces cerevisiae)	90.82
d1teda_	372	Polyketide synthase PKS18 {Mycobacterium tuberculo	81.66
d1wdkc2	128	Fatty oxidation complex beta subunit (3-ketoacyl-C	81.52

>d1m3ka1 c.95.1.1 (A:1-268) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Biosynthetic thiolase
species: Zoogloea ramigera [TaxId: 350]

Probab=100.00  E-value=1.3e-37  Score=301.35  Aligned_cols=141  Identities=55%  Similarity=0.878  Sum_probs=136.5

Q ss_pred             CCCCCcccccccCcCCCccccccccccCCcccccCCCchHhhHHHHHHHhCCCHHHHhHHHHhcHHHHHHHHhCCCCCcc
Q psy4157           1 MSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEE   80 (441)
Q Consensus         1 mS~~P~~~~~r~g~~~g~~~~~d~~~~~~l~d~~~~~~mg~~ae~~a~~~~isRe~~D~~a~~s~~ra~~a~~~g~~~~e   80 (441)
                      |||.||....|.+.+.++....|.++.++|+|++.+.+||++||++|++||||||+||+||++||+||.+|+++|+|++|
T Consensus       119 mS~~p~~~~~~~~~~~~~~~~~~~~~~~~l~d~~~~~~Mg~~Ae~~A~~~gisRe~~D~~A~~S~~ra~~A~~~g~f~~e  198 (268)
T d1m3ka1         119 MSMAPHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDAFAVASQNKAEAAQKDGRFKDE  198 (268)
T ss_dssp             STTCCEEECCSSCCSSSCEEEEEHHHHHHTBCTTTCSBHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTTTT
T ss_pred             cccCchhhhcccCCcCCCcccccccccccCcCcccCCcHHHHHHHHHHHHCcCHHHHHHHHHHHHHHhhhHHHcCCchhh
Confidence            89999988888999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeeeEeccCCCceeeeccCCCCCCccHHHhhhcCcccccCCceecCCCCCCCCccccchhh
Q psy4157          81 IVPVVISTRKGDVVVAKDEYPKANTSVDALQKLRPVFQKDGTVTAGNASGINDGAAAGKLY  141 (441)
Q Consensus        81 i~p~~~~~~~g~~~~~~de~~~~~~~~~~l~~l~p~f~~~g~~t~~~~~~~~dg~~~~~~~  141 (441)
                      |+|+.++.++|..++++||++|+++++|+|++|||+|.++|+|||||||+++|||||++|.
T Consensus       199 i~p~~~~~~~g~~~v~~d~~~r~~tt~e~L~~L~p~f~~~GtvTagnss~~~DGAAa~ll~  259 (268)
T d1m3ka1         199 IVPFIVKGRKGDITVDADEYIRHGATLDSMAKLRPAFDKEGTVTAGNASGLNDGAAAALLM  259 (268)
T ss_dssp             BCCEEECCTTCCEEECSCSSCCTTCCHHHHHTCCBSSCTTCCCBSSSBCCCEEEEEEEEEE
T ss_pred             ccccccCCCCCCeEEeCCCCCCCCCCHHHHcCCCCCcCCCCcEEChhhChHHHHHHHHHHh
Confidence            9999999989988999999999999999999999999999999999999999999998665

>d1ulqa1 c.95.1.1 (A:3-275) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoadipyl CoA thiolase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=2e-35  Score=286.78  Aligned_cols=141  Identities=41%  Similarity=0.601  Sum_probs=127.7

Q ss_pred             CCCCCccc-ccccCcCCCcccccccccc-----CCcccccCCCchHhhHHHHHHHhCCCHHHHhHHHHhcHHHHHHHHhC
Q psy4157           1 MSQAPHVI-NIRNGIKLNDAEMKDSMVF-----DGLTDAFHNIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEG   74 (441)
Q Consensus         1 mS~~P~~~-~~r~g~~~g~~~~~d~~~~-----~~l~d~~~~~~mg~~ae~~a~~~~isRe~~D~~a~~s~~ra~~a~~~   74 (441)
                      ||++||.+ +.|+|+.+|.....|....     +++.+.+...+||++||++|++||||||+||+||++||+||.+|+++
T Consensus       117 mS~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~ae~~a~~~~itRe~~D~~a~~S~~ra~~A~~~  196 (273)
T d1ulqa1         117 MSRAPYAVPKPERGFPTGNLVMYDTTLGWRFVNPKMQALYGTESMGETAENLAEMYGIRREEQDRFALLSHQKAVRAWEE  196 (273)
T ss_dssp             SSSCCEEECCCCSSSCCSCEEEEETTSSCCSCCHHHHHHSCCCCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cchhhhccccccccccCCCcccccccccccccchhhhccccccchHHHHHHHHhhcCCCHHHHHHHHhhHHHHHHHHHHc
Confidence            89999876 6889999988766665443     44455677889999999999999999999999999999999999999


Q ss_pred             CCCCcceeeeEeccCCCceeeeccCCCCCCccHHHhhhcCcccccCCceecCCCCCCCCccccchhh
Q psy4157          75 GYFDEEIVPVVISTRKGDVVVAKDEYPKANTSVDALQKLRPVFQKDGTVTAGNASGINDGAAAGKLY  141 (441)
Q Consensus        75 g~~~~ei~p~~~~~~~g~~~~~~de~~~~~~~~~~l~~l~p~f~~~g~~t~~~~~~~~dg~~~~~~~  141 (441)
                      |+|++||+|+.+..+++...|++||++|+++++|+|++|||+|+++|+|||||||+++|||||++|.
T Consensus       197 g~f~~eivp~~~~~~~~~~~v~~d~~~r~~tt~e~La~L~p~f~~~G~vTagnss~~sDGAAa~vl~  263 (273)
T d1ulqa1         197 GRFQDEVVPVPVKRGKEEILVEQDEGPRRDTSLEKLAALRPVFREGGTVTAGNSSPLNDGAAAVLLV  263 (273)
T ss_dssp             TTTTTTBCCEEEEETTEEEEECSCSCCCTTCCHHHHHHSCBSSSTTCSCBGGGBCCCEEEEEEEEEE
T ss_pred             CCcceeeeeeccccccCceEEeCCCCcCCCCCHHHHccCCCCcCCCCcEEchhhchHHHHHHHHHHc
Confidence            9999999999998877777899999999999999999999999999999999999999999998665

>d1m3ka1 c.95.1.1 (A:1-268) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Biosynthetic thiolase
species: Zoogloea ramigera [TaxId: 350]

Probab=100.00  E-value=1.1e-34  Score=280.74  Aligned_cols=171  Identities=53%  Similarity=0.798  Sum_probs=153.6

Q ss_pred             chhhHHhhhcCeeEEEEeecccCCCCccchhcccccccCcccccchhhhc-ccccccccchHHHHHHHHHHHhCCCHHHH
Q psy4157         209 PLARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFD-GLTDAFHNIHMGITAENIAKKWSISRLEQ  287 (441)
Q Consensus       209 ~~A~~~I~sG~advvla~G~E~ms~~P~~~~~r~g~~~g~~~~~~d~~~~-g~~~~~~~~~ma~~Ae~~a~~~Gitre~l  287 (441)
                      .+|+++|.+|++|++|++|+|+||+.|+....+.+...++ ....+.+.. ++++++....|+..||+++++|||+||+|
T Consensus        97 ~~Aa~~I~~G~~dvvlagG~EsmS~~p~~~~~~~~~~~~~-~~~~~~~~~~~l~d~~~~~~Mg~~Ae~~A~~~gisRe~~  175 (268)
T d1m3ka1          97 ALGMQQIATGDASIIVAGGMESMSMAPHCAHLRGGVKMGD-FKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRDEQ  175 (268)
T ss_dssp             HHHHHHHHTTSCSCEEEEEEEESTTCCEEECCSSCCSSSC-EEEEEHHHHHHTBCTTTCSBHHHHHHHHHHHTTCCHHHH
T ss_pred             HHHHHHHhCCCceEEeeccccccccCchhhhcccCCcCCC-cccccccccccCcCcccCCcHHHHHHHHHHHHCcCHHHH
Confidence            4799999999999999999999999998654344444444 344444333 67777777899999999999999999999


Q ss_pred             HHHHHHHHHHHHhhhhCCCCCccccceeeecCCCceeEeccCCCCCCCCHHHHhcCCCccccCCccccCCCCCCCCCcEE
Q psy4157         288 DEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAA  367 (441)
Q Consensus       288 d~~A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~g~~~~~~D~~~r~~~t~e~l~~~~~v~~p~G~lt~~n~~~~sDGAAA  367 (441)
                      |+||++||++|.+|+++|+|++||+|+.++.++|.++++.|+++|+.+|+|.|.+|+|+|+++|++|++|||+++|||||
T Consensus       176 D~~A~~S~~ra~~A~~~g~f~~ei~p~~~~~~~g~~~v~~d~~~r~~tt~e~L~~L~p~f~~~GtvTagnss~~~DGAAa  255 (268)
T d1m3ka1         176 DAFAVASQNKAEAAQKDGRFKDEIVPFIVKGRKGDITVDADEYIRHGATLDSMAKLRPAFDKEGTVTAGNASGLNDGAAA  255 (268)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTTTTBCCEEECCTTCCEEECSCSSCCTTCCHHHHHTCCBSSCTTCCCBSSSBCCCEEEEEE
T ss_pred             HHHHHHHHHHhhhHHHcCCchhhccccccCCCCCCeEEeCCCCCCCCCCHHHHcCCCCCcCCCCcEEChhhChHHHHHHH
Confidence            99999999999999999999999999999988888999999999999999999999999999999999999999999999


Q ss_pred             EEEcCHHHHHhcC
Q psy4157         368 VLLMSYKTAQARN  380 (441)
Q Consensus       368 vVLaSe~~A~~lg  380 (441)
                      +||+|+++|+++|
T Consensus       256 ~ll~se~~a~~~G  268 (268)
T d1m3ka1         256 ALLMSEAEASRRG  268 (268)
T ss_dssp             EEEEEHHHHHHHT
T ss_pred             HHHhhHHHHHhcC
Confidence            9999999999986

>d1ulqa1 c.95.1.1 (A:3-275) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoadipyl CoA thiolase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.5e-34  Score=280.72  Aligned_cols=180  Identities=38%  Similarity=0.555  Sum_probs=152.8

Q ss_pred             HHHhccC--cchhhHHhhhcCeeEEEEeecccCCCCccchh-cccccccCcccccchhh-----hc-ccccccccchHHH
Q psy4157         201 RAQARNI--QPLARIAIKSGDATAIVAGGQECMSQAPHVIN-IRNGIKLNDAEMKDSMV-----FD-GLTDAFHNIHMGI  271 (441)
Q Consensus       201 ~a~~~gl--~~~A~~~I~sG~advvla~G~E~ms~~P~~~~-~r~g~~~g~~~~~~d~~-----~~-g~~~~~~~~~ma~  271 (441)
                      ++|..|+  +.+|+++|++|.+|++|++|+|+||+.|+... .+.+.+++. ....+..     .. ++.++.....|++
T Consensus        85 ~~CaSg~~Ai~~a~~~I~~G~~d~~lagG~EsmS~~p~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~m~~  163 (273)
T d1ulqa1          85 RLCGSGLEAVAQAARAIWAGEGKVYIGSGVESMSRAPYAVPKPERGFPTGN-LVMYDTTLGWRFVNPKMQALYGTESMGE  163 (273)
T ss_dssp             CGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESSSCCEEECCCCSSSCCSC-EEEEETTSSCCSCCHHHHHHSCCCCHHH
T ss_pred             cccchHHHHHHHHHHHHhcCCCccceeeeccccchhhhccccccccccCCC-cccccccccccccchhhhccccccchHH
Confidence            4555554  36799999999999999999999999998664 444544443 1111111     11 2223334568999


Q ss_pred             HHHHHHHHhCCCHHHHHHHHHHHHHHHHhhhhCCCCCccccceeeecCCCceeEeccCCCCCCCCHHHHhcCCCccccCC
Q psy4157         272 TAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDG  351 (441)
Q Consensus       272 ~Ae~~a~~~Gitre~ld~~A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~g~~~~~~D~~~r~~~t~e~l~~~~~v~~p~G  351 (441)
                      +||+++++||||||+||+||++||++|.+|+++|+|++||+|+.+..+++.+.+++|+++|+.+|+|+|.+|+|+|+|+|
T Consensus       164 ~ae~~a~~~~itRe~~D~~a~~S~~ra~~A~~~g~f~~eivp~~~~~~~~~~~v~~d~~~r~~tt~e~La~L~p~f~~~G  243 (273)
T d1ulqa1         164 TAENLAEMYGIRREEQDRFALLSHQKAVRAWEEGRFQDEVVPVPVKRGKEEILVEQDEGPRRDTSLEKLAALRPVFREGG  243 (273)
T ss_dssp             HHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEETTEEEEECSCSCCCTTCCHHHHHHSCBSSSTTC
T ss_pred             HHHHHHhhcCCCHHHHHHHHhhHHHHHHHHHHcCCcceeeeeeccccccCceEEeCCCCcCCCCCHHHHccCCCCcCCCC
Confidence            99999999999999999999999999999999999999999999988888888999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCcEEEEEcCHHHHHhcCC
Q psy4157         352 TVTAGNASGINDGAAAVLLMSYKTAQARNI  381 (441)
Q Consensus       352 ~lt~~n~~~~sDGAAAvVLaSe~~A~~lg~  381 (441)
                      ++|++|||+++||||||||+|+++|++|||
T Consensus       244 ~vTagnss~~sDGAAa~vl~se~~a~~lGL  273 (273)
T d1ulqa1         244 TVTAGNSSPLNDGAAAVLLVSDDYAKAHGL  273 (273)
T ss_dssp             SCBGGGBCCCEEEEEEEEEEEHHHHHHTTC
T ss_pred             cEEchhhchHHHHHHHHHHccHHHHHHcCC
Confidence            999999999999999999999999999986

>d1wdkc1 c.95.1.1 (C:2-263) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase)
species: Pseudomonas fragi [TaxId: 296]

Probab=99.97  E-value=1.4e-32  Score=265.04  Aligned_cols=169  Identities=33%  Similarity=0.430  Sum_probs=144.6

Q ss_pred             HHHHHhccC--cchhhHHhhhcCeeEEEEeecccCCCCccchhcccccccCcccccchhhhcccccccccchHHHHHHHH
Q psy4157         199 YKRAQARNI--QPLARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENI  276 (441)
Q Consensus       199 ~~~a~~~gl--~~~A~~~I~sG~advvla~G~E~ms~~P~~~~~r~g~~~g~~~~~~d~~~~g~~~~~~~~~ma~~Ae~~  276 (441)
                      .+++|..|+  +.+|++.|.+|++|++|++|+|+||+.|......         ..   ....+.++.....|++++|++
T Consensus        90 V~~~C~Sgl~Ai~~aa~~I~sG~~dvvlAgGvEsmS~~p~~~~~~---------~~---~~~~~~~~~~~~~mg~tae~~  157 (262)
T d1wdkc1          90 VSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHMGHVSMMHGVD---------PN---PHMSLYAAKASGMMGLTAEML  157 (262)
T ss_dssp             EECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTSCTTTTBC---------CC---GGGGGTSCGGGGSHHHHHHHH
T ss_pred             ccccccHHHHHHHHHHHHHHhhcCCceeeeccccccccccccccc---------cc---ccccccccccccchhhhHHHH
Confidence            345665555  4689999999999999999999999999753200         00   001223444556899999999


Q ss_pred             HHHhCCCHHHHHHHHHHHHHHHHhhhhCCCCCccccceeeecCCCc-eeEeccCCCCCCCCHHHHhcCCCcccc-CCccc
Q psy4157         277 AKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGD-VVVAKDEYPKANTTVEALQKLRPVFQK-DGTVT  354 (441)
Q Consensus       277 a~~~Gitre~ld~~A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~g~-~~~~~D~~~r~~~t~e~l~~~~~v~~p-~G~lt  354 (441)
                      +++|||+|+++|+||+.||++|.+|+++|+|++||+|++++.+++. ..++.|+++|+.+|+|.|.+++|+|++ +|+||
T Consensus       158 a~~~gisRe~~D~~a~~S~~ra~~A~~~G~f~~ei~pv~~~~~~~~~~~~~~De~~R~~tt~E~La~LkP~f~~~~GtvT  237 (262)
T d1wdkc1         158 GKMHGISREQQDAFAVRSHQLAHKATVEGKFKDEIIPMQGYDENGFLKIFDYDETIRPDTTLESLAALKPAFNPKGGTVT  237 (262)
T ss_dssp             HHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEECTTCCEEEECSCTTCCTTCCHHHHHTSCCSSCTTTCCCC
T ss_pred             HHHhccccccchhhhhhhhhhhhhHhhcCCcceeeeeeccccccccccccccccCCCCCCCHHHHcCCCCcccCCCCcCc
Confidence            9999999999999999999999999999999999999999887775 567899999999999999999999985 69999


Q ss_pred             cCCCCCCCCCcEEEEEcCHHHHHhc
Q psy4157         355 AGNASGINDGAAAVLLMSYKTAQAR  379 (441)
Q Consensus       355 ~~n~~~~sDGAAAvVLaSe~~A~~l  379 (441)
                      ++|||+++||||||||+|+++|++|
T Consensus       238 agnsS~isDGAAavll~se~~akeL  262 (262)
T d1wdkc1         238 AGTSSQITDGASCMIVMSAQRAKDL  262 (262)
T ss_dssp             GGGBCCCEEEEEEEEEEEHHHHHHT
T ss_pred             chhhChHHHHHHHHHHhCHHHHhcC
Confidence            9999999999999999999999986

>d1wdkc1 c.95.1.1 (C:2-263) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase)
species: Pseudomonas fragi [TaxId: 296]

Probab=99.97  E-value=6.9e-33  Score=267.11  Aligned_cols=129  Identities=33%  Similarity=0.434  Sum_probs=113.9

Q ss_pred             CCCCCcccccccCcCCCccccccccccCCcccccCCCchHhhHHHHHHHhCCCHHHHhHHHHhcHHHHHHHHhCCCCCcc
Q psy4157           1 MSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEE   80 (441)
Q Consensus         1 mS~~P~~~~~r~g~~~g~~~~~d~~~~~~l~d~~~~~~mg~~ae~~a~~~~isRe~~D~~a~~s~~ra~~a~~~g~~~~e   80 (441)
                      |||+|+..+.+            .+.+..+.+++....||+|||++|++||||||+||+||++||+||++|+++|+|++|
T Consensus       124 mS~~p~~~~~~------------~~~~~~~~~~~~~~~mg~tae~~a~~~gisRe~~D~~a~~S~~ra~~A~~~G~f~~e  191 (262)
T d1wdkc1         124 MGHVSMMHGVD------------PNPHMSLYAAKASGMMGLTAEMLGKMHGISREQQDAFAVRSHQLAHKATVEGKFKDE  191 (262)
T ss_dssp             TTTSCTTTTBC------------CCGGGGGTSCGGGGSHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTT
T ss_pred             ccccccccccc------------ccccccccccccccchhhhHHHHHHHhccccccchhhhhhhhhhhhhHhhcCCccee
Confidence            89999754311            122344567777889999999999999999999999999999999999999999999


Q ss_pred             eeeeEeccCCCce-eeeccCCCCCCccHHHhhhcCccccc-CCceecCCCCCCCCccccchhh
Q psy4157          81 IVPVVISTRKGDV-VVAKDEYPKANTSVDALQKLRPVFQK-DGTVTAGNASGINDGAAAGKLY  141 (441)
Q Consensus        81 i~p~~~~~~~g~~-~~~~de~~~~~~~~~~l~~l~p~f~~-~g~~t~~~~~~~~dg~~~~~~~  141 (441)
                      |+||++++++|.. +++.||++||++|+|+|++|||+|.+ +|+|||||||+++|||||++|+
T Consensus       192 i~pv~~~~~~~~~~~~~~De~~R~~tt~E~La~LkP~f~~~~GtvTagnsS~isDGAAavll~  254 (262)
T d1wdkc1         192 IIPMQGYDENGFLKIFDYDETIRPDTTLESLAALKPAFNPKGGTVTAGTSSQITDGASCMIVM  254 (262)
T ss_dssp             BCCEEEECTTCCEEEECSCTTCCTTCCHHHHHTSCCSSCTTTCCCCGGGBCCCEEEEEEEEEE
T ss_pred             eeeeccccccccccccccccCCCCCCCHHHHcCCCCcccCCCCcCcchhhChHHHHHHHHHHh
Confidence            9999999888764 67899999999999999999999984 8999999999999999998665

>d1afwa1 c.95.1.1 (A:25-293) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Thiolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.97  E-value=2e-32  Score=264.65  Aligned_cols=111  Identities=41%  Similarity=0.600  Sum_probs=100.6

Q ss_pred             CCcccccCCCchHhhHHHHHHHhCCCHHHHhHHHHhcHHHHHHHHhCCCCCcceeeeEeccCCCceeeeccCCCCCCccH
Q psy4157          28 DGLTDAFHNIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTSV  107 (441)
Q Consensus        28 ~~l~d~~~~~~mg~~ae~~a~~~~isRe~~D~~a~~s~~ra~~a~~~g~~~~ei~p~~~~~~~g~~~~~~de~~~~~~~~  107 (441)
                      ..+.+++...+||+|||++|++||||||+||+||++||+||.+|+++|+|++||+||+++++   .+++.||++||++|+
T Consensus       151 ~~~~~~~~~~~Mg~tAe~~a~~~~isRee~D~~a~~S~~rA~~A~~~g~f~~eivpv~~~~~---~~~~~De~~R~~tt~  227 (269)
T d1afwa1         151 KNREAKKCLIPMGITNENVAANFKISRKDQDEFAANSYQKAYKAKNEGLFEDEILPIKLPDG---SICQSDEGPRPNVTA  227 (269)
T ss_dssp             HCTTGGGGGSCHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTSSTTTBCCEECTTS---CEECSCSSCCSCCCH
T ss_pred             ccccccccccccccccccchhhcCccHHHHhhHHHHHHHHHHHHHhcCCcceEecceecccc---cEEecCCCcCCCCCH
Confidence            34556667789999999999999999999999999999999999999999999999998743   478999999999999


Q ss_pred             HHhhhcCccccc-CCceecCCCCCCCCccccchhh
Q psy4157         108 DALQKLRPVFQK-DGTVTAGNASGINDGAAAGKLY  141 (441)
Q Consensus       108 ~~l~~l~p~f~~-~g~~t~~~~~~~~dg~~~~~~~  141 (441)
                      |+|++|||+|.+ +|+|||||||+++|||||++|.
T Consensus       228 E~La~L~P~f~~~~G~vTagnsS~~sDGAAavll~  262 (269)
T d1afwa1         228 ESLSSIRPAFIKDRGTTTAGNASQVSDGVAGVLLA  262 (269)
T ss_dssp             HHHHHCCBSCC---CCCBTTTBCCBEEEEEEEEEE
T ss_pred             HHHcCCCCccCCCCCeEcchhcChHHHHHHHHHHh
Confidence            999999999976 6999999999999999998665

>d1afwa1 c.95.1.1 (A:25-293) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Thiolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.96  E-value=1.1e-30  Score=252.33  Aligned_cols=159  Identities=36%  Similarity=0.476  Sum_probs=133.2

Q ss_pred             chhhHHhhhcCeeEEEEeecccCCCCccchh-cccccccCcccccchhhhcccccccccchHHHHHHHHHHHhCCCHHHH
Q psy4157         209 PLARIAIKSGDATAIVAGGQECMSQAPHVIN-IRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQ  287 (441)
Q Consensus       209 ~~A~~~I~sG~advvla~G~E~ms~~P~~~~-~r~g~~~g~~~~~~d~~~~g~~~~~~~~~ma~~Ae~~a~~~Gitre~l  287 (441)
                      .+|++.|.+|++|++|++|+|+||+.|.... ...    +.   . ..+......+.....|+.+||+++++|||+|+++
T Consensus       109 ~~Aa~~I~~G~~divlagG~EsmS~~p~~~~~~~~----~~---~-~~~~~~~~~~~~~~~Mg~tAe~~a~~~~isRee~  180 (269)
T d1afwa1         109 NDIANKIKVGQIDIGLALGVESMTNNYKNVNPLGM----IS---S-EELQKNREAKKCLIPMGITNENVAANFKISRKDQ  180 (269)
T ss_dssp             HHHHHHHHTTSCSEEEEEEEEEHHHHGGGSCTTCS----CC---C-HHHHHCTTGGGGGSCHHHHHHHHHHHTTCCHHHH
T ss_pred             HHHHHHHhhccccceeeeecccccccccccccccc----cc---c-chhcccccccccccccccccccchhhcCccHHHH
Confidence            5799999999999999999999999987542 111    00   0 0111122333445689999999999999999999


Q ss_pred             HHHHHHHHHHHHhhhhCCCCCccccceeeecCCCceeEeccCCCCCCCCHHHHhcCCCcccc-CCccccCCCCCCCCCcE
Q psy4157         288 DEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQK-DGTVTAGNASGINDGAA  366 (441)
Q Consensus       288 d~~A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~g~~~~~~D~~~r~~~t~e~l~~~~~v~~p-~G~lt~~n~~~~sDGAA  366 (441)
                      |+||++||++|.+|+++|+|.+||+|++++.+   .+++.|+++|+++|+|+|.+|+|+|.+ +|++|++|||+++||||
T Consensus       181 D~~a~~S~~rA~~A~~~g~f~~eivpv~~~~~---~~~~~De~~R~~tt~E~La~L~P~f~~~~G~vTagnsS~~sDGAA  257 (269)
T d1afwa1         181 DEFAANSYQKAYKAKNEGLFEDEILPIKLPDG---SICQSDEGPRPNVTAESLSSIRPAFIKDRGTTTAGNASQVSDGVA  257 (269)
T ss_dssp             HHHHHHHHHHHHHHHHTTSSTTTBCCEECTTS---CEECSCSSCCSCCCHHHHHHCCBSCC---CCCBTTTBCCBEEEEE
T ss_pred             hhHHHHHHHHHHHHHhcCCcceEecceecccc---cEEecCCCcCCCCCHHHHcCCCCccCCCCCeEcchhcChHHHHHH
Confidence            99999999999999999999999999987532   468899999999999999999999965 59999999999999999


Q ss_pred             EEEEcCHHHHHh
Q psy4157         367 AVLLMSYKTAQA  378 (441)
Q Consensus       367 AvVLaSe~~A~~  378 (441)
                      ||||+|+++|++
T Consensus       258 avll~se~~A~e  269 (269)
T d1afwa1         258 GVLLARRSVANQ  269 (269)
T ss_dssp             EEEEEEHHHHHH
T ss_pred             HHHHhhHHHhcC
Confidence            999999999986

>d1afwa2 c.95.1.1 (A:294-417) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Thiolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.33  E-value=3.9e-13  Score=113.06  Aligned_cols=61  Identities=26%  Similarity=0.410  Sum_probs=57.9

Q ss_pred             cCCCceEEEEEEEeecCCCCcCCCChHHHHHHHHHHcCCCCCCccEEEecCCChhhhhhhh
Q psy4157         379 RNIQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATSGGIANRRQ  439 (441)
Q Consensus       379 lg~~p~a~I~~~~~~~~~p~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~~~~~~  439 (441)
                      ||++|+++|++|+.++.+|..|+.+|+.|++++|+|+|++++|||+|||||+|+..+...+
T Consensus         1 Lgl~plAri~~~a~~g~~P~~m~~gPv~Ai~klL~r~gl~~~Did~~EinEAFA~q~l~~~   61 (124)
T d1afwa2           1 LNLPVLGRYIDFQTVGVPPEIMGVGPAYAIPKVLEATGLQVQDIDIFEINEAFAAQALYCI   61 (124)
T ss_dssp             TTCCCCEEEEEEEEEECCGGGGGGHHHHHHHHHHHHHTCCGGGCSEEEECCSBHHHHHHHH
T ss_pred             CCCcEEEEEEEEEEEecCHHHhhhChHHHHHHHHHHcCCCcccCcEEEeccchhHHHHHHH
Confidence            6899999999999999999999999999999999999999999999999999999887544

>d1m3ka2 c.95.1.1 (A:269-392) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Biosynthetic thiolase
species: Zoogloea ramigera [TaxId: 350]

Probab=99.26  E-value=2.3e-12  Score=108.24  Aligned_cols=59  Identities=39%  Similarity=0.690  Sum_probs=56.0

Q ss_pred             CCceEEEEEEEeecCCCCcCCCChHHHHHHHHHHcCCCCCCccEEEecCCChhhhhhhh
Q psy4157         381 IQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATSGGIANRRQ  439 (441)
Q Consensus       381 ~~p~a~I~~~~~~~~~p~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~~~~~~  439 (441)
                      ++|+++|++++.++.+|..|+.+|+.|++++|+|+|++++|||+|||||+|+..+...+
T Consensus         1 L~Plari~~~a~~g~dP~~mg~~Pv~A~~~lL~r~gl~~~Did~~EinEAFA~q~la~~   59 (124)
T d1m3ka2           1 IQPLGRIVSWATVGVDPKVMGTGPIPASRKALERAGWKIGDLDLVEANEAFAAQACAVN   59 (124)
T ss_dssp             CCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCSEEEECCSBHHHHHHHH
T ss_pred             CCcEEEEEEEEEEecChHHhccchHHHHHHHHHHcCCChhcccHHHhcccchhheeeeh
Confidence            58999999999999999999999999999999999999999999999999999887654

>d1wdkc2 c.95.1.1 (C:264-391) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase)
species: Pseudomonas fragi [TaxId: 296]

Probab=99.24  E-value=3.1e-12  Score=108.01  Aligned_cols=58  Identities=33%  Similarity=0.605  Sum_probs=55.3

Q ss_pred             CCCceEEEEEEEeecCCCCcCCCChHHHHHHHHHHcCCCCCCccEEEecCCChhhhhh
Q psy4157         380 NIQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATSGGIANR  437 (441)
Q Consensus       380 g~~p~a~I~~~~~~~~~p~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~~~~  437 (441)
                      |++|+++|++|+.++++|..|+.+|+.|++++|+|+|++++|||+|||||+|+..+..
T Consensus         1 Gl~pla~i~~~~~~g~dP~~mg~~p~~A~~klL~ragl~~~did~~EinEAFA~q~l~   58 (128)
T d1wdkc2           1 GLEPLAVIRSMAVAGVDPAIMGYGPVPATQKALKRAGLNMADIDFIELNEAFAAQALP   58 (128)
T ss_dssp             TCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCCEEEECCSBHHHHHH
T ss_pred             CCCEEEEEEEEEEEecCHHHhccCcHHHHHHHhhhcCccccccceEEeecccchhhhh
Confidence            6899999999999999999999999999999999999999999999999999988653

>d1ulqa2 c.95.1.1 (A:276-400) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoadipyl CoA thiolase
species: Thermus thermophilus [TaxId: 274]

Probab=99.21  E-value=6.2e-12  Score=105.67  Aligned_cols=56  Identities=38%  Similarity=0.622  Sum_probs=53.1

Q ss_pred             CceEEEEEEEeecCCCCcCCCChHHHHHHHHHHcCCCCCCccEEEecCCChhhhhh
Q psy4157         382 QPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATSGGIANR  437 (441)
Q Consensus       382 ~p~a~I~~~~~~~~~p~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~~~~  437 (441)
                      ||+++|++|+.++.+|..|+.+|+.|++++|+++|++++|||+|||||+|+..+..
T Consensus         1 KPlA~i~~~~~~g~~P~~~~~~P~~A~~~~L~r~gl~~~Did~~EinEAFAaq~l~   56 (125)
T d1ulqa2           1 RPLARVRAIAVAGVPPRIMGIGPVPATRKALERAGLSFSDLGLIELNEAFAAQALA   56 (125)
T ss_dssp             CCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHTTCCGGGCSEEEECCSBHHHHHH
T ss_pred             CCeEEEEEEEEEecCHHHHhhccHHHHHhHhhccCcCccccchheeccccchhHHH
Confidence            69999999999999999999999999999999999999999999999999976653

>d1tqyb2 c.95.1.1 (B:210-403) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB
species: Streptomyces coelicolor [TaxId: 1902]

Probab=97.75  E-value=3.7e-05  Score=68.57  Aligned_cols=78  Identities=18%  Similarity=0.094  Sum_probs=62.7

Q ss_pred             CCCCCCCCcEEEEEcCHHHHHhcCC-CceEEEEEEEeecCC--CCcCCCChHHHHHHHHHHcCCCCCCccEEEecCCChh
Q psy4157         357 NASGINDGAAAVLLMSYKTAQARNI-QPLARIVAMSSAGVE--PTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATSGG  433 (441)
Q Consensus       357 n~~~~sDGAAAvVLaSe~~A~~lg~-~p~a~I~~~~~~~~~--p~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~  433 (441)
                      +.-.+++|++++||.+.+.|++.|. +.++.|.+++...+.  +...+.+...+++++|+++|++++|||++|-|-.-|.
T Consensus        14 ~G~~~gEGa~~~vLe~~~~A~~rg~~~i~a~i~g~~~~~d~~~~~~~~~g~~~~i~~aL~~a~i~~~di~~v~ahgtGt~   93 (194)
T d1tqyb2          14 AGYVPGEGGAILVLEDSAAAEARGRHDAYGELAGCASTFDPAPGSGRPAGLERAIRLALNDAGTGPEDVDVVFADGAGVP   93 (194)
T ss_dssp             CCBCBBCEEEEEEEEEHHHHHHHTCCCCSEEEEEEEEEECCCTTCCCCCSHHHHHHHHHHHHTCCGGGCCEEECCCCCSH
T ss_pred             CCEeeEeeEEEEEEeEHHHHHhcCCceeeeeeecccccccccccccchhhhhhhhhhhcccccccccceeeeeccccCcc
Confidence            3445899999999999999999886 468999998866432  2223345678999999999999999999999987765


Q ss_pred             h
Q psy4157         434 I  434 (441)
Q Consensus       434 ~  434 (441)
                      .
T Consensus        94 ~   94 (194)
T d1tqyb2          94 E   94 (194)
T ss_dssp             H
T ss_pred             c
Confidence            4

>d1tqya2 c.95.1.1 (A:219-423) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA
species: Streptomyces coelicolor [TaxId: 1902]

Probab=97.73  E-value=3e-05  Score=69.75  Aligned_cols=77  Identities=18%  Similarity=0.234  Sum_probs=62.4

Q ss_pred             CCCCCCCcEEEEEcCHHHHHhcCCCceEEEEEEEeecCCCCcC-----CCChHHHHHHHHHHcCCCCCCccEEEecCCCh
Q psy4157         358 ASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLM-----GTGPIPAVNAVLAKAGWSKEEVGYFNRVATSG  432 (441)
Q Consensus       358 ~~~~sDGAAAvVLaSe~~A~~lg~~p~a~I~~~~~~~~~p~~~-----~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft  432 (441)
                      --.+++|++++||.+.+.|++.+.++++.|.+++...+-....     ......+++++|+++|++++|||++|.|-.-|
T Consensus        16 G~v~gEGa~~~vL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~a~i~~~~i~~ie~hgtGt   95 (205)
T d1tqya2          16 GFVLAEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTGLKADGREMAETIRVALDESRTDATDIDYINAHGSGT   95 (205)
T ss_dssp             CBCEECEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCCC
T ss_pred             CEeeEeeEEEEEEeEHHHHHHCCCceEEEEEeeEccccccccCcccccccccchhhhhHHhhhcCCccceeeeecccccc
Confidence            3458999999999999999999999999999988764322221     12236789999999999999999999998766


Q ss_pred             hh
Q psy4157         433 GI  434 (441)
Q Consensus       433 ~~  434 (441)
                      .+
T Consensus        96 ~~   97 (205)
T d1tqya2          96 RQ   97 (205)
T ss_dssp             HH
T ss_pred             cc
Confidence            54

>d1ox0a2 c.95.1.1 (A:252-409) Beta-ketoacyl-ACP synthase II {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=95.02  E-value=0.011  Score=50.19  Aligned_cols=52  Identities=31%  Similarity=0.348  Sum_probs=39.9

Q ss_pred             ceEEEEEEEeecCCCCc-----CCCChHHHHHHHHHHcCCCCCCccEEEecCCChhh
Q psy4157         383 PLARIVAMSSAGVEPTL-----MGTGPIPAVNAVLAKAGWSKEEVGYFNRVATSGGI  434 (441)
Q Consensus       383 p~a~I~~~~~~~~~p~~-----~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~  434 (441)
                      .+++|+|++...+--..     -+.+...+++++|+++|+.++|||++|.|-.-|..
T Consensus         2 Iyaei~G~~~~~Dg~~~~~p~p~g~~~~~~~~~al~~a~l~p~~i~~v~aHgtgT~~   58 (158)
T d1ox0a2           2 ILAEVVGYGNTCDAYHMTSPHPEGQGAIKAIKLALEEAEISPEQVAYVNAHGTSTPA   58 (158)
T ss_dssp             CCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCCEECCCCSCHH
T ss_pred             EEEEEEEEEEcCCCCCCcCCCCCHHHHHHHHHHhhccccccceeeeEEeeecccccc
Confidence            57899999976532222     22234679999999999999999999999887654

>d1e5ma2 c.95.1.1 (A:256-416) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Synechocystis sp. [TaxId: 1143]

Probab=94.47  E-value=0.03  Score=47.37  Aligned_cols=52  Identities=23%  Similarity=0.210  Sum_probs=39.2

Q ss_pred             ceEEEEEEEeecCCCC-----cCCCChHHHHHHHHHHcCCCCCCccEEEecCCChhh
Q psy4157         383 PLARIVAMSSAGVEPT-----LMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATSGGI  434 (441)
Q Consensus       383 p~a~I~~~~~~~~~p~-----~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~  434 (441)
                      .+++|+|++...+--.     ..+.+...++++||+++|++++|||++|.|-.-|..
T Consensus         2 Iya~i~G~~~~~Dg~~~~~~~p~g~~~~~~i~~Al~~a~i~~~~i~~v~~HgtGT~~   58 (161)
T d1e5ma2           2 IYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWALKDSGLKPEMVSYINAHGTSTPA   58 (161)
T ss_dssp             CCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHH
T ss_pred             EEEEEeeEEEeCCCCCCCCCCcCHHHHHHHHHHHHHHcCCChhhcceEEEeccCCcc
Confidence            4688999997754211     122334689999999999999999999999866553

>d1j3na2 c.95.1.1 (A:250-408) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Thermus thermophilus [TaxId: 274]

Probab=94.43  E-value=0.021  Score=48.25  Aligned_cols=52  Identities=31%  Similarity=0.429  Sum_probs=39.2

Q ss_pred             ceEEEEEEEeecCC-----CCcCCCChHHHHHHHHHHcCCCCCCccEEEecCCChhh
Q psy4157         383 PLARIVAMSSAGVE-----PTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATSGGI  434 (441)
Q Consensus       383 p~a~I~~~~~~~~~-----p~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~  434 (441)
                      .+++|.|++...+-     |.....+...+++++|+++|++++|||++|.|-.=|..
T Consensus         2 Iya~I~G~~~~~Dg~~~~~~~p~g~~~~~~~~~al~~agi~p~~I~~ie~HgtGT~~   58 (159)
T d1j3na2           2 IYAELVGFGRSADAHHITEPHPEGKGAALAMARALKDAGIAPEQVGYINAHGTSTPV   58 (159)
T ss_dssp             CCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHH
T ss_pred             EEEEEeEEEEeCCCCCCCCCCcCHHHHHHHhhccHhhcCCCHHHcCeEeccccCCcc
Confidence            46789999976432     22222344678999999999999999999999876654

>d2ix4a2 c.95.1.1 (A:301-461) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]

Probab=93.70  E-value=0.033  Score=47.10  Aligned_cols=51  Identities=27%  Similarity=0.424  Sum_probs=38.1

Q ss_pred             eEEEEEEEeecCC-----CCcCCCChHHHHHHHHHHcCCCCCCccEEEecCCChhh
Q psy4157         384 LARIVAMSSAGVE-----PTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATSGGI  434 (441)
Q Consensus       384 ~a~I~~~~~~~~~-----p~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~  434 (441)
                      +++|.|++...+-     |.....+...+++++|+++|++++|||++|.|-.-|.+
T Consensus         1 Y~~i~G~~~~~Dg~~~t~p~~~g~~~~~~~~~al~~a~~~~~di~yveaHGtGT~~   56 (161)
T d2ix4a2           1 YAELCGYGMSGDAHHITQPPEDGKGAVLAMTRALRQSGLCPNQIDYVNAHATSTPI   56 (161)
T ss_dssp             CEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHH
T ss_pred             CeEEEEEEEcCCCCCCcCCChhHHHHHHHHHHHHHhcCCCccccCEEEEeccCCCC
Confidence            4789999876532     22222233568999999999999999999999877654

>d2gfva2 c.95.1.1 (A:252-412) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Escherichia coli [TaxId: 562]

Probab=93.47  E-value=0.042  Score=46.39  Aligned_cols=52  Identities=27%  Similarity=0.364  Sum_probs=38.6

Q ss_pred             ceEEEEEEEeecCC-----CCcCCCChHHHHHHHHHHcCCCCCCccEEEecCCChhh
Q psy4157         383 PLARIVAMSSAGVE-----PTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATSGGI  434 (441)
Q Consensus       383 p~a~I~~~~~~~~~-----p~~~~~~~~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~  434 (441)
                      .+++|+|++...+-     |.....+...+++++|+++|++++|||++|.|-.=|.+
T Consensus         2 Iya~I~G~~~~~Dg~~~~~~~p~g~~~~~~~~~al~~a~i~p~~i~~ie~HgtGT~~   58 (161)
T d2gfva2           2 IYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNAHGTSTPA   58 (161)
T ss_dssp             CCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHH
T ss_pred             EEEEEeeEEEeCCCCCCCCCCCCHHHHHHHHHHhHhhcccCcceEEEEEeecccCcc
Confidence            46789999876432     11112234679999999999999999999999866654

>d1afwa2 c.95.1.1 (A:294-417) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Thiolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.82  E-value=0.005  Score=50.33  Aligned_cols=78  Identities=15%  Similarity=0.201  Sum_probs=51.4

Q ss_pred             HHHHHHHHhCCCHHHHHHH----HHHHHHHHHhhhhCCCCCccccceeeecCCCceeEeccCCCCCCCCHHHHhcCCCcc
Q psy4157         272 TAENIAKKWSISRLEQDEY----AYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVF  347 (441)
Q Consensus       272 ~Ae~~a~~~Gitre~ld~~----A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~g~~~~~~D~~~r~~~t~e~l~~~~~v~  347 (441)
                      ..++.+++.|++.+|+|.|    ||.++..++. .+.+.     -+-++|.++|.+.+   .||...+..+.+.++-...
T Consensus        29 Ai~klL~r~gl~~~Did~~EinEAFA~q~l~~~-~~l~i-----d~~kvN~~GGaiAl---GHP~GaSGarlv~~l~~~L   99 (124)
T d1afwa2          29 AIPKVLEATGLQVQDIDIFEINEAFAAQALYCI-HKLGI-----DLNKVNPRGGAIAL---GHPLGCTGARQVATILREL   99 (124)
T ss_dssp             HHHHHHHHHTCCGGGCSEEEECCSBHHHHHHHH-HHHTC-----CGGGBSTTCCHHHH---CBCTTTHHHHHHHHHHHHS
T ss_pred             HHHHHHHHcCCCcccCcEEEeccchhHHHHHHH-HHcCC-----ChhhccccCcccee---cCCcCCchHHHHHHHHHHh
Confidence            4577788888888888877    6666666652 22222     23457888888877   8999988888776665555


Q ss_pred             ccC--CccccCCC
Q psy4157         348 QKD--GTVTAGNA  358 (441)
Q Consensus       348 ~p~--G~lt~~n~  358 (441)
                      +++  |..++|..
T Consensus       100 ~~~~~glas~C~g  112 (124)
T d1afwa2         100 KKDQIGVVSMCIG  112 (124)
T ss_dssp             CTTCEEEEEEEET
T ss_pred             ccCCEEEEEEccc
Confidence            432  45555443

>d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Polyketide synthase PKS18
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=81.66  E-value=0.46  Score=44.75  Aligned_cols=31  Identities=16%  Similarity=0.239  Sum_probs=26.4

Q ss_pred             HHHHHHHHHHcCCCCCCccEEEecCCChhhh
Q psy4157         405 IPAVNAVLAKAGWSKEEVGYFNRVATSGGIA  435 (441)
Q Consensus       405 ~~Aa~~al~~AGl~~~DID~~Ei~D~Ft~~~  435 (441)
                      ..+++++|+++|++++|||+|=+|-....+.
T Consensus       269 ~~~i~~~L~~~gl~~~did~~i~Hq~~~~i~  299 (372)
T d1teda_         269 APVVTEMLWDNGLQISDIDLWAIHPGGPKII  299 (372)
T ss_dssp             HHHHHHHHHHTTCCGGGCSCEEECCSCHHHH
T ss_pred             HHHHHHHHHhcCCCHHHhhhhhccCccHHHH
Confidence            4678999999999999999999998765543

>d1wdkc2 c.95.1.1 (C:264-391) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase)
species: Pseudomonas fragi [TaxId: 296]

Probab=81.52  E-value=0.012  Score=48.34  Aligned_cols=91  Identities=13%  Similarity=0.141  Sum_probs=58.6

Q ss_pred             HHHHHHHHHhCCCHHHHHHH----HHHHHHHHHhhhhCCCCCccccceeeecCCCceeEeccCCCCCCCCHHHHhcCCCc
Q psy4157         271 ITAENIAKKWSISRLEQDEY----AYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPV  346 (441)
Q Consensus       271 ~~Ae~~a~~~Gitre~ld~~----A~~S~~~A~~A~~~g~f~~ei~Pv~v~~~~g~~~~~~D~~~r~~~t~e~l~~~~~v  346 (441)
                      ..+++.+++.|++.+|+|.|    ||.++..+.. .+.+.+  ++.+-++|.++|.+.+   .||...+..+.+.++-..
T Consensus        27 ~A~~klL~ragl~~~did~~EinEAFA~q~l~~~-~~~~~~--~~~~ekvN~~GGaiAl---GHP~GASGaRlv~~l~~~  100 (128)
T d1wdkc2          27 PATQKALKRAGLNMADIDFIELNEAFAAQALPVL-KDLKVL--DKMNEKVNLHGGAIAL---GHPFGCSGARISGTLLNV  100 (128)
T ss_dssp             HHHHHHHHHHTCCGGGCCEEEECCSBHHHHHHHH-HHTTCG--GGHHHHBSTTCCHHHH---CCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhhhcCccccccceEEeecccchhhhhhh-hhcccc--cCCcceecCCCCcccc---cccccccchhHHHHHHHH
Confidence            35577888888888888887    6777766652 122221  1223467888998887   899888888877776655


Q ss_pred             ccc-C---CccccCCCCCCCCCcEEEEE
Q psy4157         347 FQK-D---GTVTAGNASGINDGAAAVLL  370 (441)
Q Consensus       347 ~~p-~---G~lt~~n~~~~sDGAAAvVL  370 (441)
                      +.. +   |.+++|.....   +.|+||
T Consensus       101 L~~~~~~~Glas~C~gGG~---g~A~~i  125 (128)
T d1wdkc2         101 MKQNGGTFGLSTMCIGLGQ---GIATVF  125 (128)
T ss_dssp             HHHTTCSEEEEEEEETTTE---EEEEEE
T ss_pred             HHhcCCCEEEEEecccccc---eeEEEE
Confidence            543 2   45666555544   455555