Psyllid ID: psy4214

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-
MSNGYEYEIISHLPEHILELLFSYLDLTDIRNCMLVCKKWYTLLCNEKNEVWRVHCLRFMSENVIKSDLLSSLSTYKAKLRAYFHSWNPNDCSRNVYIKPNGFTLHRNPVAQSTDAVRGKMGFYQGRHAWEVFWQGPLGTVAVVGIATKDALLQSHGYLALIGSDSESWGWNIVDNRILHNGESQGSYPQLNNPPKWEKESGLSWTVMTALYPLRRTMSSLGWHSEDCQTKYSTPPYLLYTETQKYQWCTLDPHWMAELFSLGTAVLGHLE
cccHHHHHHHccccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHccccHHccccccccccHHHHHHccccccccccccccEEEEcccEEEEEccccccccEEEcccccccccEEEEEEEccccccEEEEcccccccccccccEEEEEccccccccccccccEEEEccccccccccccccccccccEEEEEEEEccEEEEEEccEEEEEEEcccccccccccEEEEEEEccEEEEEccHHHHHHHHHHHHHHccccc
ccccHHHHHHHcccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHccccccccHHHcccccccHHHHHHHHccccccccccEEEEcccEEEEEccccccccccccccccccccEEEEEEEccccccEEEEEEEccccccccccEEEEEcccccccccEccccEEEEccccccccccccccccHHHHcccEEEccccccccccccccccccccccEEEcccccEEEEEccccEEEEcccHHHHHHHHHHHHHHHcccc
MSNGYEYEIISHLPEHILELLFSYLDLTDIRNCMLVCKKWYTLLCNEKNEVWRVHCLRFMSENVIKSDLLSSLSTYKAKLRAYFHswnpndcsrnvyikpngftlhrnpvaqstdavrgkmgfyqgrHAWEvfwqgplgTVAVVGIATKDALLQSHGYLALigsdseswgwnivdnrilhngesqgsypqlnnppkwekesglswTVMTALYPLRrtmsslgwhsedcqtkystppyllytetqkyqwctldphWMAELFSLGTAVLGHLE
MSNGYEYEIISHLPEHILELLFSYLDLTDIRNCMLVCKKWYTLLCNEKNEVWRVHCLRFMSENVIKSDLLSSLSTYKAKLRAYFHSWNPNDCSRNVYIKPNGFTLHRNPVAQSTDAVRGKMGFYQGRHAWEVFWQGPLGTVAVVGIATKDALLQSHGYLALIGSDSESWGWNIVDNRILHNGESQGSYPQLNNPPKWEKESGLSWTVMTALYPLRRTMSSLGWHSEDCQTKYSTPPYLLYTETQKYQWCTLDPHWMAELFSLGTAVLGHLE
MSNGYEYEIISHLPEHILELLFSYLDLTDIRNCMLVCKKWYTLLCNEKNEVWRVHCLRFMSENVIKSDLLSSLSTYKAKLRAYFHSWNPNDCSRNVYIKPNGFTLHRNPVAQSTDAVRGKMGFYQGRHAWEVFWQGPLGTVAVVGIATKDALLQSHGYLALIGSDSESWGWNIVDNRILHNGESQGSYPQLNNPPKWEKESGLSWTVMTALYPLRRTMSSLGWHSEDCQTKYSTPPYLLYTETQKYQWCTLDPHWMAELFSLGTAVLGHLE
****YEYEIISHLPEHILELLFSYLDLTDIRNCMLVCKKWYTLLCNEKNEVWRVHCLRFMSENVIKSDLLSSLSTYKAKLRAYFHSWNPNDCSRNVYIKPNGFTLHRNPVAQSTDAVRGKMGFYQGRHAWEVFWQGPLGTVAVVGIATKDALLQSHGYLALIGSDSESWGWNIVDNRILHN*******************SGLSWTVMTALYPLRRTMSSLGWHSEDCQTKYSTPPYLLYTETQKYQWCTLDPHWMAELFSLGTAVLG***
*****EY*IISHLPEHILELLFSYLDLTDIRNCMLVCKKWYTLLCNEKNEVWRVHCLRFMSENVIKSD***SLSTYKAKLRAYFHSWNPNDCSRNVYIKPNGFTLHRNPVAQSTDAVRGKMGFYQGRHAWEVFWQGPLGTVAVVGIATKDALLQSHGYLALIGSDSESWGWNIVDNRILHNGESQGSYPQLNNPPKWEKESGLSWTVMTALYPLRRTMSSLGWHSEDCQTKYSTPPYLLYTETQKYQWCTLDPHWMAELFSLGTAVLGHL*
MSNGYEYEIISHLPEHILELLFSYLDLTDIRNCMLVCKKWYTLLCNEKNEVWRVHCLRFMSENVIKSDLLSSLSTYKAKLRAYFHSWNPNDCSRNVYIKPNGFTLHRNPVAQSTDAVRGKMGFYQGRHAWEVFWQGPLGTVAVVGIATKDALLQSHGYLALIGSDSESWGWNIVDNRILHNGESQGSYPQLNNPPKWEKESGLSWTVMTALYPLRRTMSSLGWHSEDCQTKYSTPPYLLYTETQKYQWCTLDPHWMAELFSLGTAVLGHLE
**NGYEYEIISHLPEHILELLFSYLDLTDIRNCMLVCKKWYTLLCNEKNEVWRVHCLRFMSENVIKSDLLSSLSTYKAKLRAYFHSWNPNDCSRNVYIKPNGFTLHRNPVAQSTDAVRGKMGFYQGRHAWEVFWQGPLGTVAVVGIATKDALLQSHGYLALIGSDSESWGWNIVDNRILHNGESQGSYPQLNNPPKWEKESGLSWTVMTALYPLRRTMSSLGWHSEDCQTKYSTPPYLLYTETQKYQWCTLDPHWMAELFSLGTAVLGHLE
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MSNGYEYEIISHLPEHILELLFSYLDLTDIRNCMLVCKKWYTLLCNEKNEVWRVHCLRFMSENVIKSDLLSSLSTYKAKLRAYFHSWNPNDCSRNVYIKPNGFTLHRNPVAQSTDAVRGKMGFYQGRHAWEVFWQGPLGTVAVVGIATKDALLQSHGYLALIGSDSESWGWNIVDNRILHNGESQGSYPQLNNPPKWEKESGLSWTVMTALYPLRRTMSSLGWHSEDCQTKYSTPPYLLYTETQKYQWCTLDPHWMAELFSLGTAVLGHLE
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query271 2.2.26 [Sep-21-2011]
Q7QGL9258 F-box/SPRY domain-contain yes N/A 0.704 0.740 0.664 7e-77
B0X9V1258 F-box/SPRY domain-contain N/A N/A 0.704 0.740 0.664 1e-76
Q16XV7258 F-box/SPRY domain-contain N/A N/A 0.704 0.740 0.664 7e-76
B4KNC5252 F-box/SPRY domain-contain N/A N/A 0.675 0.726 0.683 3e-75
B4J6Q0252 F-box/SPRY domain-contain N/A N/A 0.675 0.726 0.677 4e-75
B3NRP1255 F-box/SPRY domain-contain N/A N/A 0.675 0.717 0.683 5e-75
B3MDR0255 F-box/SPRY domain-contain N/A N/A 0.675 0.717 0.683 6e-75
B4LMQ3252 F-box/SPRY domain-contain N/A N/A 0.675 0.726 0.683 7e-75
B4QE02255 F-box/SPRY domain-contain N/A N/A 0.675 0.717 0.683 7e-75
Q9V6L9255 F-box/SPRY domain-contain yes N/A 0.675 0.717 0.677 2e-74
>sp|Q7QGL9|FBSP1_ANOGA F-box/SPRY domain-containing protein 1 OS=Anopheles gambiae GN=Fsn PE=3 SV=3 Back     alignment and function desciption
 Score =  287 bits (734), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 127/191 (66%), Positives = 155/191 (81%)

Query: 8   EIISHLPEHILELLFSYLDLTDIRNCMLVCKKWYTLLCNEKNEVWRVHCLRFMSENVIKS 67
           E   ++P+++LEL+FS+L L D+RNC LVCK WY   C+E NEVWR  CL+ +     K+
Sbjct: 7   EYAPNIPDNVLELIFSFLKLQDLRNCTLVCKSWYRFFCDENNEVWRAQCLQKVPAEAFKN 66

Query: 68  DLLSSLSTYKAKLRAYFHSWNPNDCSRNVYIKPNGFTLHRNPVAQSTDAVRGKMGFYQGR 127
           DLL+ + TYKAKLRAYFH+WNP DCSR+VYIKPNGFTLHRNPVAQSTD  RGK+GF  GR
Sbjct: 67  DLLTVVPTYKAKLRAYFHAWNPFDCSRHVYIKPNGFTLHRNPVAQSTDGSRGKIGFKHGR 126

Query: 128 HAWEVFWQGPLGTVAVVGIATKDALLQSHGYLALIGSDSESWGWNIVDNRILHNGESQGS 187
           HAWEV W+GPLGTVAVVGIATKDA +Q HGY AL+G+D +SWGWN+VDN +LHNG++ G 
Sbjct: 127 HAWEVRWEGPLGTVAVVGIATKDAAIQCHGYYALLGADDQSWGWNLVDNLLLHNGDAHGI 186

Query: 188 YPQLNNPPKWE 198
           YP LNN PK++
Sbjct: 187 YPLLNNAPKYK 197
Required in the presynaptic motoneuron to down-regulate the levels of wnd and restrain synaptic terminal growth at the neuromuscular junction (NMJ).
Anopheles gambiae (taxid: 7165)
>sp|B0X9V1|FBSP1_CULQU F-box/SPRY domain-containing protein 1 OS=Culex quinquefasciatus GN=Fsn PE=3 SV=1 Back     alignment and function description
>sp|Q16XV7|FBSP1_AEDAE F-box/SPRY domain-containing protein 1 OS=Aedes aegypti GN=Fsn PE=3 SV=1 Back     alignment and function description
>sp|B4KNC5|FBSP1_DROMO F-box/SPRY domain-containing protein 1 OS=Drosophila mojavensis GN=Fsn PE=3 SV=1 Back     alignment and function description
>sp|B4J6Q0|FBSP1_DROGR F-box/SPRY domain-containing protein 1 OS=Drosophila grimshawi GN=Fsn PE=3 SV=1 Back     alignment and function description
>sp|B3NRP1|FBSP1_DROER F-box/SPRY domain-containing protein 1 OS=Drosophila erecta GN=Fsn PE=3 SV=1 Back     alignment and function description
>sp|B3MDR0|FBSP1_DROAN F-box/SPRY domain-containing protein 1 OS=Drosophila ananassae GN=Fsn PE=3 SV=1 Back     alignment and function description
>sp|B4LMQ3|FBSP1_DROVI F-box/SPRY domain-containing protein 1 OS=Drosophila virilis GN=Fsn PE=3 SV=1 Back     alignment and function description
>sp|B4QE02|FBSP1_DROSI F-box/SPRY domain-containing protein 1 OS=Drosophila simulans GN=Fsn PE=3 SV=2 Back     alignment and function description
>sp|Q9V6L9|FBSP1_DROME F-box/SPRY domain-containing protein 1 OS=Drosophila melanogaster GN=Fsn PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query271
91094905255 PREDICTED: similar to CG4643 CG4643-PA [ 0.712 0.756 0.694 2e-81
321460926252 hypothetical protein DAPPUDRAFT_326703 [ 0.697 0.75 0.687 3e-77
289742119255 SOCS box protein ssB-1 [Glossina morsita 0.701 0.745 0.678 6e-77
307200788254 F-box/SPRY domain-containing protein 1 [ 0.704 0.751 0.675 7e-77
307183514254 F-box/SPRY domain-containing protein 1 [ 0.704 0.751 0.670 1e-76
242007555254 F-box/SPRY-domain protein, putative [Ped 0.704 0.751 0.664 6e-76
350407599254 PREDICTED: F-box/SPRY domain-containing 0.704 0.751 0.649 3e-75
158288022258 Anopheles gambiae str. PEST AGAP012460-P 0.704 0.740 0.664 4e-75
340717536254 PREDICTED: f-box/SPRY domain-containing 0.704 0.751 0.643 4e-75
380030616280 PREDICTED: F-box/SPRY domain-containing 0.730 0.707 0.626 6e-75
>gi|91094905|ref|XP_973449.1| PREDICTED: similar to CG4643 CG4643-PA [Tribolium castaneum] gi|270006590|gb|EFA03038.1| hypothetical protein TcasGA2_TC010464 [Tribolium castaneum] Back     alignment and taxonomy information
 Score =  308 bits (788), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 134/193 (69%), Positives = 169/193 (87%)

Query: 6   EYEIISHLPEHILELLFSYLDLTDIRNCMLVCKKWYTLLCNEKNEVWRVHCLRFMSENVI 65
           +  + S LP+++LE++FSYL L D+RNC LVCK+WY+ L +E N+VWR+HC+R ++E  +
Sbjct: 2   DAAVASTLPDNVLEVIFSYLSLHDLRNCSLVCKRWYSFLNDENNDVWRLHCIRKLAEEAL 61

Query: 66  KSDLLSSLSTYKAKLRAYFHSWNPNDCSRNVYIKPNGFTLHRNPVAQSTDAVRGKMGFYQ 125
           KSDLLSS+ TYKAKLRA++H+WNPNDCSRN+YIKPNGFTLHRNPVAQSTDA RGK+GF  
Sbjct: 62  KSDLLSSVPTYKAKLRAFYHAWNPNDCSRNIYIKPNGFTLHRNPVAQSTDASRGKIGFRH 121

Query: 126 GRHAWEVFWQGPLGTVAVVGIATKDALLQSHGYLALIGSDSESWGWNIVDNRILHNGESQ 185
           GRHAWEV W+GPLGTVAV+GIATKDA LQ HGY+AL+GSD +SWGWN+VDN +LHNG++Q
Sbjct: 122 GRHAWEVIWEGPLGTVAVIGIATKDAPLQCHGYVALLGSDDQSWGWNLVDNHLLHNGDAQ 181

Query: 186 GSYPQLNNPPKWE 198
           G+YP LNN PK++
Sbjct: 182 GNYPLLNNAPKYQ 194

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|321460926|gb|EFX71963.1| hypothetical protein DAPPUDRAFT_326703 [Daphnia pulex] Back     alignment and taxonomy information
>gi|289742119|gb|ADD19807.1| SOCS box protein ssB-1 [Glossina morsitans morsitans] Back     alignment and taxonomy information
>gi|307200788|gb|EFN80841.1| F-box/SPRY domain-containing protein 1 [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|307183514|gb|EFN70293.1| F-box/SPRY domain-containing protein 1 [Camponotus floridanus] gi|332018430|gb|EGI59024.1| F-box/SPRY domain-containing protein 1 [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|242007555|ref|XP_002424605.1| F-box/SPRY-domain protein, putative [Pediculus humanus corporis] gi|212508048|gb|EEB11867.1| F-box/SPRY-domain protein, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
>gi|350407599|ref|XP_003488138.1| PREDICTED: F-box/SPRY domain-containing protein 1-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|158288022|ref|XP_309899.3| Anopheles gambiae str. PEST AGAP012460-PA [Anopheles gambiae str. PEST] gi|257096639|sp|Q7QGL9.3|FBSP1_ANOGA RecName: Full=F-box/SPRY domain-containing protein 1 gi|157019320|gb|EAA05647.3| AGAP012460-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
>gi|340717536|ref|XP_003397237.1| PREDICTED: f-box/SPRY domain-containing protein 1-like [Bombus terrestris] Back     alignment and taxonomy information
>gi|380030616|ref|XP_003698939.1| PREDICTED: F-box/SPRY domain-containing protein 1-like [Apis florea] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query271
UNIPROTKB|Q7QGL9258 Fsn "F-box/SPRY domain-contain 0.704 0.740 0.664 1.4e-73
UNIPROTKB|B3NRP1255 Fsn "F-box/SPRY domain-contain 0.675 0.717 0.683 1.7e-73
UNIPROTKB|B4J6Q0252 Fsn "F-box/SPRY domain-contain 0.675 0.726 0.677 1.7e-73
UNIPROTKB|B0X9V1258 Fsn "F-box/SPRY domain-contain 0.704 0.740 0.664 2.8e-73
UNIPROTKB|B3MDR0255 Fsn "F-box/SPRY domain-contain 0.675 0.717 0.683 2.8e-73
UNIPROTKB|B4LMQ3252 Fsn "F-box/SPRY domain-contain 0.675 0.726 0.683 2.8e-73
UNIPROTKB|B4QE02255 Fsn "F-box/SPRY domain-contain 0.675 0.717 0.683 2.8e-73
UNIPROTKB|B4KNC5252 Fsn "F-box/SPRY domain-contain 0.675 0.726 0.683 3.6e-73
FB|FBgn0043010255 Fsn [Drosophila melanogaster ( 0.675 0.717 0.677 5.9e-73
UNIPROTKB|B4HQ29255 Fsn "F-box/SPRY domain-contain 0.675 0.717 0.677 9.6e-73
UNIPROTKB|Q7QGL9 Fsn "F-box/SPRY domain-containing protein 1" [Anopheles gambiae (taxid:7165)] Back     alignment and assigned GO terms
 Score = 743 (266.6 bits), Expect = 1.4e-73, P = 1.4e-73
 Identities = 127/191 (66%), Positives = 155/191 (81%)

Query:     8 EIISHLPEHILELLFSYLDLTDIRNCMLVCKKWYTLLCNEKNEVWRVHCLRFMSENVIKS 67
             E   ++P+++LEL+FS+L L D+RNC LVCK WY   C+E NEVWR  CL+ +     K+
Sbjct:     7 EYAPNIPDNVLELIFSFLKLQDLRNCTLVCKSWYRFFCDENNEVWRAQCLQKVPAEAFKN 66

Query:    68 DLLSSLSTYKAKLRAYFHSWNPNDCSRNVYIKPNGFTLHRNPVAQSTDAVRGKMGFYQGR 127
             DLL+ + TYKAKLRAYFH+WNP DCSR+VYIKPNGFTLHRNPVAQSTD  RGK+GF  GR
Sbjct:    67 DLLTVVPTYKAKLRAYFHAWNPFDCSRHVYIKPNGFTLHRNPVAQSTDGSRGKIGFKHGR 126

Query:   128 HAWEVFWQGPLGTVAVVGIATKDALLQSHGYLALIGSDSESWGWNIVDNRILHNGESQGS 187
             HAWEV W+GPLGTVAVVGIATKDA +Q HGY AL+G+D +SWGWN+VDN +LHNG++ G 
Sbjct:   127 HAWEVRWEGPLGTVAVVGIATKDAAIQCHGYYALLGADDQSWGWNLVDNLLLHNGDAHGI 186

Query:   188 YPQLNNPPKWE 198
             YP LNN PK++
Sbjct:   187 YPLLNNAPKYK 197
GO:0007274 "neuromuscular synaptic transmission" evidence=ISS
GO:0031594 "neuromuscular junction" evidence=ISS
GO:0045886 "negative regulation of synaptic growth at neuromuscular junction" evidence=ISS
UNIPROTKB|B3NRP1 Fsn "F-box/SPRY domain-containing protein 1" [Drosophila erecta (taxid:7220)] Back     alignment and assigned GO terms
UNIPROTKB|B4J6Q0 Fsn "F-box/SPRY domain-containing protein 1" [Drosophila grimshawi (taxid:7222)] Back     alignment and assigned GO terms
UNIPROTKB|B0X9V1 Fsn "F-box/SPRY domain-containing protein 1" [Culex quinquefasciatus (taxid:7176)] Back     alignment and assigned GO terms
UNIPROTKB|B3MDR0 Fsn "F-box/SPRY domain-containing protein 1" [Drosophila ananassae (taxid:7217)] Back     alignment and assigned GO terms
UNIPROTKB|B4LMQ3 Fsn "F-box/SPRY domain-containing protein 1" [Drosophila virilis (taxid:7244)] Back     alignment and assigned GO terms
UNIPROTKB|B4QE02 Fsn "F-box/SPRY domain-containing protein 1" [Drosophila simulans (taxid:7240)] Back     alignment and assigned GO terms
UNIPROTKB|B4KNC5 Fsn "F-box/SPRY domain-containing protein 1" [Drosophila mojavensis (taxid:7230)] Back     alignment and assigned GO terms
FB|FBgn0043010 Fsn [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|B4HQ29 Fsn "F-box/SPRY domain-containing protein 1" [Drosophila sechellia (taxid:7238)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P0C2W1FBSP1_HUMANNo assigned EC number0.61700.69000.6538yesN/A
B4F739FBSP1_XENTRNo assigned EC number0.62960.69370.6666yesN/A
Q9V6L9FBSP1_DROMENo assigned EC number0.67750.67520.7176yesN/A
Q290L5FBSP1_DROPSNo assigned EC number0.66660.67520.7176yesN/A
Q18223FBSP1_CAEELNo assigned EC number0.52380.69370.5662yesN/A
Q6NZ03FBSP1_DANRENo assigned EC number0.58940.70110.6529yesN/A
Q7QGL9FBSP1_ANOGANo assigned EC number0.66490.70470.7403yesN/A
Q8K3B1FBSP1_MOUSENo assigned EC number0.61700.69000.6538yesN/A
P0CH38FBSP1_RATNo assigned EC number0.63030.60140.7086yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query271
cd12907175 cd12907, SPRY_Fbox, SPRY domain in the F-box famil 5e-77
cd12875171 cd12875, SPRY_SOCS_Fbox, SPRY domain in Fbxo45 and 1e-55
cd12906174 cd12906, SPRY_SOCS1-2-4, SPRY domain in the suppre 4e-44
pfam1293747 pfam12937, F-box-like, F-box-like 3e-11
cd12876187 cd12876, SPRY_SOCS3, SPRY domain in the suppressor 4e-11
pfam0064648 pfam00646, F-box, F-box domain 4e-08
smart0025641 smart00256, FBOX, A Receptor for Ubiquitination Ta 4e-08
smart00449122 smart00449, SPRY, Domain in SPla and the RYanodine 7e-06
pfam00622125 pfam00622, SPRY, SPRY domain 9e-06
cd11709118 cd11709, SPRY, SPRY domain 2e-05
cd12891169 cd12891, SPRY_PRY_C-IV_2, PRY/SPRY domain in tripa 0.001
>gnl|CDD|240487 cd12907, SPRY_Fbox, SPRY domain in the F-box family Fbxo45 Back     alignment and domain information 
 Score =  231 bits (590), Expect = 5e-77
 Identities = 89/114 (78%), Positives = 103/114 (90%)

Query: 85  HSWNPNDCSRNVYIKPNGFTLHRNPVAQSTDAVRGKMGFYQGRHAWEVFWQGPLGTVAVV 144
           H+WNPNDCSRNVYIKPNGFTLHRNPVAQSTD  RGK+GF  GRHAWEV+W+GPLGTVAVV
Sbjct: 1   HAWNPNDCSRNVYIKPNGFTLHRNPVAQSTDGARGKIGFSSGRHAWEVWWEGPLGTVAVV 60

Query: 145 GIATKDALLQSHGYLALIGSDSESWGWNIVDNRILHNGESQGSYPQLNNPPKWE 198
           GIATK+A LQ HGY+AL+GSD +SWGWN+VDN +LHNG+ QG+YPQ NN PK++
Sbjct: 61  GIATKEAPLQCHGYVALLGSDDQSWGWNLVDNHLLHNGDVQGNYPQCNNAPKYQ 114

Fbxo45 is a novel synaptic E3 and ubiquitin ligase, related to the suppressor of cytokine signaling (SOCS) proteins and located N-terminal to a SPRY (SPla and the ryanodine receptor) domain. Fbxo45 induces the degradation of a synaptic vesicle-priming factor, Munc13-1, via the SPRY domain, thus playing an important role in the regulation of neurotransmission by modulating Munc13-1 at the synapse. F-box motifs are found in proteins that function as the substrate recognition component of SCF E3 complexes. Length = 175
>gnl|CDD|240455 cd12875, SPRY_SOCS_Fbox, SPRY domain in Fbxo45 and suppressors of cytokine signaling (SOCS) proteins Back     alignment and domain information
>gnl|CDD|240486 cd12906, SPRY_SOCS1-2-4, SPRY domain in the suppressor of cytokine signaling 1, 2, 4 families (SOCS1, SOCS2, SOCS4) Back     alignment and domain information
>gnl|CDD|221867 pfam12937, F-box-like, F-box-like Back     alignment and domain information
>gnl|CDD|240456 cd12876, SPRY_SOCS3, SPRY domain in the suppressor of cytokine signaling 3 (SOCS3) family Back     alignment and domain information
>gnl|CDD|201368 pfam00646, F-box, F-box domain Back     alignment and domain information
>gnl|CDD|197608 smart00256, FBOX, A Receptor for Ubiquitination Targets Back     alignment and domain information
>gnl|CDD|214669 smart00449, SPRY, Domain in SPla and the RYanodine Receptor Back     alignment and domain information
>gnl|CDD|216029 pfam00622, SPRY, SPRY domain Back     alignment and domain information
>gnl|CDD|240451 cd11709, SPRY, SPRY domain Back     alignment and domain information
>gnl|CDD|240471 cd12891, SPRY_PRY_C-IV_2, PRY/SPRY domain in tripartite motif-containing (TRIM) proteins, including TRIM14-like, TRIM16-like, TRIM25-like, TRIM47-like and RNF135 and stonustoxin Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 271
KOG3953|consensus242 100.0
KOG4367|consensus699 99.62
smart00449122 SPRY Domain in SPla and the RYanodine Receptor. Do 99.61
PF00622124 SPRY: SPRY domain; InterPro: IPR003877 The SPRY do 99.51
PF1293747 F-box-like: F-box-like; PDB: 1P22_A 2OVP_B 2OVR_B 99.5
PF0064648 F-box: F-box domain; InterPro: IPR001810 The F-box 98.97
smart0025641 FBOX A Receptor for Ubiquitination Targets. 98.95
KOG2120|consensus419 98.51
KOG4030|consensus197 98.33
KOG0281|consensus 499 98.2
KOG2997|consensus366 98.05
KOG4341|consensus 483 97.61
KOG2626|consensus544 97.27
KOG0274|consensus 537 96.65
PF1376549 PRY: SPRY-associated domain; PDB: 3KB5_A 2VOK_A 2V 96.5
PLN03215 373 ascorbic acid mannose pathway regulator 1; Provisi 95.82
KOG0349|consensus 725 94.89
smart0058952 PRY associated with SPRY domains. 94.07
PF13013109 F-box-like_2: F-box-like domain 92.46
KOG3926|consensus332 91.65
PF06881109 Elongin_A: RNA polymerase II transcription factor 84.43
>KOG3953|consensus Back     alignment and domain information 
Probab=100.00  E-value=6.9e-34  Score=252.87  Aligned_cols=150  Identities=43%  Similarity=0.777  Sum_probs=136.9

Q ss_pred             ccchHHHHHHHHhhhcCCCCCCceeEEeCC-CeEEeeCCCCccchhhhccccccCceeEEEEEEeC-CCCceEEEEEecc
Q psy4214          72 SLSTYKAKLRAYFHSWNPNDCSRNVYIKPN-GFTLHRNPVAQSTDAVRGKMGFYQGRHAWEVFWQG-PLGTVAVVGIATK  149 (271)
Q Consensus        72 ~~P~~~~k~r~~~~~Wd~~~as~nI~LS~~-~~T~~~~P~~~st~qVrg~~gfs~G~HYWEV~~s~-~~Gt~~~vGVa~~  149 (271)
                      .+|+.....++. |.|++.+.+.|+.++++ ++|||+||+.|+|+.+||+.+|+.|+|+|||.|.. +.||+++|||||+
T Consensus        15 ~~~~~~~~~~~~-~~w~~~drs~nv~vk~~~~~tfhrhpvaqstd~~rGk~g~~~g~h~w~i~w~~r~~GT~avVGIaTk   93 (242)
T KOG3953|consen   15 FMPPSALGVQAQ-HGWSPSDRSLNVFVKLPDGLTFHRHPVAQSTDGIRGKRGYSRGRHAWEIAWPNRQRGTHAVVGIATK   93 (242)
T ss_pred             hcCCcchhhHHh-hccCcccccceeEEecCCcceEEecCCccccccccceeeeccCceEEEEEecCCccCCcceEEEEcc
Confidence            444434555544 99999999999999964 79999999999999999999999999999999996 8999999999999


Q ss_pred             ccccccCCCcceecCCCceeeEEecCCeeEeCCcccCCCCCCCCCCCCCCCCeEEEEEecccccccccceeEEEEecCCc
Q psy4214         150 DALLQSHGYLALIGSDSESWGWNIVDNRILHNGESQGSYPQLNNPPKWEKESGLSWTVMTALYPLRRTMSSLGWHSEDCQ  229 (271)
Q Consensus       150 ~~~l~~~g~~sllG~n~~SWgl~~~~~~~~Hng~~~~~~p~~~~~~~~~~~~rIGV~LD~~~~~~~~~~G~Lsfy~~~~~  229 (271)
                      .++++++||..|||+|++||||++.+|.++|||.....||.+++.|+|.+++||+|+||       .+.|+|+|+.+.+.
T Consensus        94 ~Aplha~gy~aLlGs~~qswGw~l~~~~l~H~g~~~~~yp~~~~~p~~~vp~ri~viLD-------m~egtl~F~~~~e~  166 (242)
T KOG3953|consen   94 VAPLHAVGYTALLGSNSQSWGWDLGRNVLYHDGQVAGLYPALNRQPKYNVPDRILVILD-------MIEGTLSFAADGEY  166 (242)
T ss_pred             cCchhhhHHHHHhCCCCCccceecccceeeecCccccccccccCCchhcCCceEEEEEe-------eccceEEEEECCeE
Confidence            99999999999999999999999998999999977778999888899999999999999       99999999997655

>KOG4367|consensus Back     alignment and domain information
>smart00449 SPRY Domain in SPla and the RYanodine Receptor Back     alignment and domain information
>PF00622 SPRY: SPRY domain; InterPro: IPR003877 The SPRY domain is of unknown function Back     alignment and domain information
>PF12937 F-box-like: F-box-like; PDB: 1P22_A 2OVP_B 2OVR_B 2OVQ_B 1FS1_A 1FS2_C 1FQV_I 1LDK_E 2AST_B 2ASS_B Back     alignment and domain information
>PF00646 F-box: F-box domain; InterPro: IPR001810 The F-box domain was first described as a sequence motif found in cyclin-F that interacts with the protein SKP1 [, ] Back     alignment and domain information
>smart00256 FBOX A Receptor for Ubiquitination Targets Back     alignment and domain information
>KOG2120|consensus Back     alignment and domain information
>KOG4030|consensus Back     alignment and domain information
>KOG0281|consensus Back     alignment and domain information
>KOG2997|consensus Back     alignment and domain information
>KOG4341|consensus Back     alignment and domain information
>KOG2626|consensus Back     alignment and domain information
>KOG0274|consensus Back     alignment and domain information
>PF13765 PRY: SPRY-associated domain; PDB: 3KB5_A 2VOK_A 2VOL_B 2FBE_B 2WL1_A 2IWG_E Back     alignment and domain information
>PLN03215 ascorbic acid mannose pathway regulator 1; Provisional Back     alignment and domain information
>KOG0349|consensus Back     alignment and domain information
>smart00589 PRY associated with SPRY domains Back     alignment and domain information
>PF13013 F-box-like_2: F-box-like domain Back     alignment and domain information
>KOG3926|consensus Back     alignment and domain information
>PF06881 Elongin_A: RNA polymerase II transcription factor SIII (Elongin) subunit A; InterPro: IPR010684 This family represents a conserved region within RNA polymerase II transcription factor SIII (Elongin) subunit A Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query271
2v24_A208 Structure Of The Human Spry Domain-Containing Socs 4e-26
3f2o_A233 Crystal Structure Of Human SplaRYANODINE RECEPTOR D 7e-26
2jk9_A212 The Structure Of Spla-Ryanodine Receptor Domain And 7e-26
2afj_A226 Spry Domain-Containing Socs Box Protein 2 (Ssb-2) L 7e-26
3ek9_A213 Spry Domain-Containing Socs Box Protein 2: Crystal 8e-26
3emw_A217 Crystal Structure Of Human SplaRYANODINE RECEPTOR D 2e-25
2fnj_A226 Crystal Structure Of A B30.2SPRY DOMAIN-Containing 8e-23
2ihs_A214 Crystal Structure Of The B30.2SPRY DOMAIN OF GUSTAV 1e-22
>pdb|2V24|A Chain A, Structure Of The Human Spry Domain-Containing Socs Box Protein Ssb-4 Length = 208 Back     alignment and structure 
Iteration: 1

 Score =  114 bits (286), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 58/114 (50%), Positives = 79/114 (69%), Gaps = 4/114 (3%)
Query: 85  HSWNPNDCSRNVYIKPNG-FTLHRNPVAQSTDAVRGKMGFYQGRHAWEVFWQG-PLGTVA 142
           H+WNP D S NV++K +   T HR+PVAQSTD +RGK+G  +G HAW++ W     GT A
Sbjct: 29  HAWNPEDRSLNVFVKDDDRLTFHRHPVAQSTDGIRGKVGHARGLHAWQINWPARQRGTHA 88
Query: 143 VVGIATKDALLQSHGYLALIGSDSESWGWNIVDNRILHNGESQG--SYPQLNNP 194
           VVG+AT  A L S GY AL+GSD+ESWGW++  +R+ H+G++Q   +YP    P
Sbjct: 89  VVGVATARAPLHSVGYTALVGSDAESWGWDLGRSRLYHDGKNQPGVAYPAFLGP 142
>pdb|3F2O|A Chain A, Crystal Structure Of Human SplaRYANODINE RECEPTOR DOMAIN AND SOCS BOX Containing 1 (Spsb1) In Complex With A 20-Residue Vasa Peptide Length = 233 Back     alignment and structure
>pdb|2JK9|A Chain A, The Structure Of Spla-Ryanodine Receptor Domain And Socs Box Containing 1 In Complex With A Par-4 Peptide Length = 212 Back     alignment and structure
>pdb|2AFJ|A Chain A, Spry Domain-Containing Socs Box Protein 2 (Ssb-2) Length = 226 Back     alignment and structure
>pdb|3EK9|A Chain A, Spry Domain-Containing Socs Box Protein 2: Crystal Structure And Residues Critical For Protein Binding Length = 213 Back     alignment and structure
>pdb|3EMW|A Chain A, Crystal Structure Of Human SplaRYANODINE RECEPTOR DOMAIN AND SOCS BOX Containing 2 (Spsb2) In Complex With A 20-Residue Vasa Peptide Length = 217 Back     alignment and structure
>pdb|2FNJ|A Chain A, Crystal Structure Of A B30.2SPRY DOMAIN-Containing Protein Gustavus In Complex With Elongin B And Elongin C Length = 226 Back     alignment and structure
>pdb|2IHS|A Chain A, Crystal Structure Of The B30.2SPRY DOMAIN OF GUSTAVUS IN Complex With A 20-Residue Vasa Peptide Length = 214 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query271
2afj_A226 Gene rich cluster, C9 gene; beta sandwich, gene re 3e-37
3emw_A217 SPRY domain-containing SOCS box protein 2; apoptos 2e-35
2jk9_A212 SPRY domain-containing SOCS box protein 1; transcr 2e-33
3toj_A213 SET1/ASH2 histone methyltransferase complex subun; 2e-11
2yyo_A171 SPRY domain-containing protein 3; NPPSFA, national 1e-09
1fs1_A53 SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, L 2e-09
2ast_B336 S-phase kinase-associated protein 2; SCF-substrate 5e-08
3ogk_B 592 Coronatine-insensitive protein 1; leucine rich rep 1e-07
3l2o_B312 F-box only protein 4; small G protein fold, UBL co 2e-07
2e31_A297 FBS1, F-box only protein 2; ubiquitin, SCF, ubiqui 3e-07
2p1m_B 594 Transport inhibitor response 1 protein; F-BOX, leu 6e-07
3v7d_B 464 Cell division control protein 4; WD 40 domain, pho 4e-06
1p22_A 435 F-BOX/WD-repeat protein 1A; ubiquitination, degrad 1e-05
2ovr_B 445 FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 1e-04
>2afj_A Gene rich cluster, C9 gene; beta sandwich, gene regulation; NMR {Mus musculus} SCOP: b.29.1.22 Length = 226 Back     alignment and structure
 Score =  130 bits (328), Expect = 3e-37
 Identities = 57/156 (36%), Positives = 78/156 (50%), Gaps = 5/156 (3%)

Query: 49  NEVWRVHCLRFMSENVIKSDLLSSLSTYKA--KLRAYFHSWNPNDCSRNVYIKPNGFTLH 106
           +        + +  +    + L  L +      +    H WNP DCS N+ +K  G    
Sbjct: 3   SARQSTPTSQALYSDFSPPEGLEELLSAPPPDLVAQRHHGWNPKDCSENIDVKEGGLCFE 62

Query: 107 RNPVAQSTDAVRGKMGFYQGRHAWEVFWQG-PLGTVAVVGIATKDALLQSHGYLALIGSD 165
           R PVAQSTD VRGK G+ +G HAWE+ W     GT AVVG+AT  A LQ+  Y AL+GS+
Sbjct: 63  RRPVAQSTDGVRGKRGYSRGLHAWEISWPLEQRGTHAVVGVATALAPLQADHYAALLGSN 122

Query: 166 SESWGWNIVDNRILHNGE--SQGSYPQLNNPPKWEK 199
           SESWGW+I   ++ H  +      YP      +   
Sbjct: 123 SESWGWDIGRGKLYHQSKGLEAPQYPAGPQGEQLVV 158
>3emw_A SPRY domain-containing SOCS box protein 2; apoptosis nucleus, apoptosis, UBL conjugation pathwayc, CL transcription regulation, transcription, phosphoprotein; 1.80A {Homo sapiens} PDB: 3ek9_A Length = 217 Back     alignment and structure
>2jk9_A SPRY domain-containing SOCS box protein 1; transcription regulation, transcription; 1.79A {Homo sapiens} PDB: 3f2o_A 2fnj_A 2v24_A 2ihs_A Length = 212 Back     alignment and structure
>3toj_A SET1/ASH2 histone methyltransferase complex subun; transcription, SPRY domain, prote binding, histone methylation, RBBP5, DPY-30, nuclear; 2.07A {Homo sapiens} Length = 213 Back     alignment and structure
>2yyo_A SPRY domain-containing protein 3; NPPSFA, national project on protein structural and functional analyses; 2.00A {Homo sapiens} Length = 171 Back     alignment and structure
>1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E Length = 53 Back     alignment and structure
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A Length = 336 Back     alignment and structure
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* Length = 592 Back     alignment and structure
>3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens} Length = 312 Back     alignment and structure
>2e31_A FBS1, F-box only protein 2; ubiquitin, SCF, ubiquitin ligase, FBS1; 2.40A {Mus musculus} PDB: 2e32_A Length = 297 Back     alignment and structure
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* Length = 594 Back     alignment and structure
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* Length = 464 Back     alignment and structure
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 Length = 435 Back     alignment and structure
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* Length = 445 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query271
3emw_A217 SPRY domain-containing SOCS box protein 2; apoptos 99.95
2afj_A226 Gene rich cluster, C9 gene; beta sandwich, gene re 99.95
2jk9_A212 SPRY domain-containing SOCS box protein 1; transcr 99.94
2vok_A188 52 kDa RO protein; polymorphism, immune system, me 99.93
3uv9_A186 TRIM5alpha, tripartite motif-containing protein 5; 99.93
2wl1_A191 Pyrin, marenostrin; amyloidosis, polymorphism, cyt 99.92
3kb5_A193 Tripartite motif-containing protein 72; B30.2, gus 99.92
2fbe_A201 Predicted: similar to RET finger protein-like 1; d 99.92
4b3n_A602 Maltose-binding periplasmic protein, tripartite mo 99.85
3toj_A213 SET1/ASH2 histone methyltransferase complex subun; 99.77
2yyo_A171 SPRY domain-containing protein 3; NPPSFA, national 99.5
1fs1_A53 SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, L 99.38
3v7d_B 464 Cell division control protein 4; WD 40 domain, pho 99.04
1p22_A 435 F-BOX/WD-repeat protein 1A; ubiquitination, degrad 98.99
3l2o_B312 F-box only protein 4; small G protein fold, UBL co 98.96
2e31_A297 FBS1, F-box only protein 2; ubiquitin, SCF, ubiqui 98.95
2ovr_B 445 FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 98.92
2ast_B336 S-phase kinase-associated protein 2; SCF-substrate 98.55
2p1m_B 594 Transport inhibitor response 1 protein; F-BOX, leu 98.17
3ogk_B 592 Coronatine-insensitive protein 1; leucine rich rep 97.67
2e63_A170 KIAA1787 protein; structure genomics, neuralized d 96.18
>3emw_A SPRY domain-containing SOCS box protein 2; apoptosis nucleus, apoptosis, UBL conjugation pathwayc, CL transcription regulation, transcription, phosphoprotein; 1.80A {Homo sapiens} PDB: 3ek9_A Back     alignment and structure
Probab=99.95  E-value=1.1e-28  Score=218.47  Aligned_cols=151  Identities=39%  Similarity=0.633  Sum_probs=125.7

Q ss_pred             cccchHHHHHHHHhhhcCCCCCCceeEEeCCCeEEeeCCCCccchhhhccccccCceeEEEEEEeC-CCCceEEEEEecc
Q psy4214          71 SSLSTYKAKLRAYFHSWNPNDCSRNVYIKPNGFTLHRNPVAQSTDAVRGKMGFYQGRHAWEVFWQG-PLGTVAVVGIATK  149 (271)
Q Consensus        71 s~~P~~~~k~r~~~~~Wd~~~as~nI~LS~~~~T~~~~P~~~st~qVrg~~gfs~G~HYWEV~~s~-~~Gt~~~vGVa~~  149 (271)
                      ..+|+ .....+...+||++||++++.||+|+.+++.+|..+++++|||+++|++|+|||||++.+ ..|+.+.||||++
T Consensus        31 l~~~~-~~~~~~~~~tlDp~ta~~~L~lSed~~~v~~~~~~~~~~~Vl~~~~~~sGrhYWEV~v~~~~~g~~~~vGv~~~  109 (217)
T 3emw_A           31 LSAPP-PDLGAQRRHGWNPKDCSENIEVKEGGLYFERRPVAQSTDGARGKRGYSRGLHAWEISWPLEQRGTHAVVGVATA  109 (217)
T ss_dssp             HHSCC-CCHHHHHHTSEEEEEECTTEEEEGGGTEEEECCBSSCEEEEEESCCBSSSEEEEEEECCGGGCTTCCEEEEECT
T ss_pred             hcCCC-cccccccceEeCcccCCCCEEECCCCeEEEECccCCCCCEEEeCCCccCccEEEEEEEcccCCCCceeEEEEcC
Confidence            34555 344557889999999999999999999998888877788999999999999999999986 3556789999999


Q ss_pred             ccccccCCCcceecCCCceeeEEecCCeeEeCCccc--CCCCCCCCCCCCCCCCeEEEEEecccccccccceeEEEEecC
Q psy4214         150 DALLQSHGYLALIGSDSESWGWNIVDNRILHNGESQ--GSYPQLNNPPKWEKESGLSWTVMTALYPLRRTMSSLGWHSED  227 (271)
Q Consensus       150 ~~~l~~~g~~sllG~n~~SWgl~~~~~~~~Hng~~~--~~~p~~~~~~~~~~~~rIGV~LD~~~~~~~~~~G~Lsfy~~~  227 (271)
                      .++++++|+.+++|.|+.||+|.+.++..|||++..  ..||...+.+.+..+++|||+||       +++|+|+||.++
T Consensus       110 ~~~r~~~g~~~~lG~~~~SW~l~~~~g~~~h~~~~~~~~~~~~~~~~~~~~~~d~IGV~LD-------~~~G~LsFy~ng  182 (217)
T 3emw_A          110 LAPLQTDHYAALLGSNSESWGWDIGRGKLYHQSKGPGAPQYPAGTQGEQLEVPERLLVVLD-------MEEGTLGYAIGG  182 (217)
T ss_dssp             TSCCEESSSCCCTTSSTTEEEEETTTCBEESSCCSSCCCBSSSSSTTCCCCCCSEEEEEEE-------TTTTEEEEEETT
T ss_pred             ccccccCCccccccCCCCEEEEEeCCCcEEeCCcccCCccccccccccCCCCCCEEEEEEE-------cCCCEEEEEECC
Confidence            999988998899999999999998777899998753  23653111245678999999999       999999999865


Q ss_pred             Cc
Q psy4214         228 CQ  229 (271)
Q Consensus       228 ~~  229 (271)
                      ..
T Consensus       183 ~~  184 (217)
T 3emw_A          183 TY  184 (217)
T ss_dssp             EE
T ss_pred             eE
Confidence            44
>2afj_A Gene rich cluster, C9 gene; beta sandwich, gene regulation; NMR {Mus musculus} SCOP: b.29.1.22 Back     alignment and structure
>2jk9_A SPRY domain-containing SOCS box protein 1; transcription regulation, transcription; 1.79A {Homo sapiens} PDB: 3f2o_A 2fnj_A 2v24_A 2ihs_A Back     alignment and structure
>2vok_A 52 kDa RO protein; polymorphism, immune system, metal-binding, tripartite motif (TRIM) protein, SPRY systemic lupus erythematosus, zinc, B30.2; 1.30A {Mus musculus} PDB: 2vol_B* 2iwg_B* Back     alignment and structure
>3uv9_A TRIM5alpha, tripartite motif-containing protein 5; domain SWAP, antiretroviral, HIV capsid, ligase; 1.55A {Macaca mulatta} Back     alignment and structure
>2wl1_A Pyrin, marenostrin; amyloidosis, polymorphism, cytoskeleton, actin-binding inflammatory response, metal-binding, signaling protein; 1.35A {Homo sapiens} Back     alignment and structure
>3kb5_A Tripartite motif-containing protein 72; B30.2, gustavus, SPRY, TRIM21, TRIM72, PRY, high resolution, Mg53; 1.50A {Homo sapiens} Back     alignment and structure
>2fbe_A Predicted: similar to RET finger protein-like 1; dimer, jellyroll beta-sandwich fold, unknown function; 2.52A {Homo sapiens} SCOP: b.29.1.22 Back     alignment and structure
>4b3n_A Maltose-binding periplasmic protein, tripartite motif-containing protein 5; sugar binding protein-ligase complex; HET: MAL MES; 3.30A {Escherichia coli} PDB: 2lm3_A Back     alignment and structure
>3toj_A SET1/ASH2 histone methyltransferase complex subun; transcription, SPRY domain, prote binding, histone methylation, RBBP5, DPY-30, nuclear; 2.07A {Homo sapiens} Back     alignment and structure
>2yyo_A SPRY domain-containing protein 3; NPPSFA, national project on protein structural and functional analyses; 2.00A {Homo sapiens} Back     alignment and structure
>1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E Back     alignment and structure
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* Back     alignment and structure
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 Back     alignment and structure
>3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens} Back     alignment and structure
>2e31_A FBS1, F-box only protein 2; ubiquitin, SCF, ubiquitin ligase, FBS1; 2.40A {Mus musculus} PDB: 2e32_A Back     alignment and structure
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* Back     alignment and structure
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A Back     alignment and structure
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* Back     alignment and structure
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* Back     alignment and structure
>2e63_A KIAA1787 protein; structure genomics, neuralized domain, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 271
d2fnja1217 b.29.1.22 (A:35-251) LD34464p {Fruit fly (Drosophi 1e-25
d2afja1213 b.29.1.22 (A:12-224) SPRY domain-containing SOCS b 5e-21
d1nexb1100 a.158.1.1 (B:270-369) Cdc4 F-box and linker domain 1e-11
d2ovrb1102 a.158.1.1 (B:2263-2364) F-box/WD repeat-containing 2e-08
d1p22a1118 a.158.1.1 (A:135-252) F-box/WD-repeat protein 1 (b 2e-07
d1fs1a141 a.158.1.1 (A:109-149) Skp2 {Human (Homo sapiens) [ 3e-07
>d2fnja1 b.29.1.22 (A:35-251) LD34464p {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 217 Back     information, alignment and structure

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: SPRY domain
domain: LD34464p
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 98.7 bits (245), Expect = 1e-25
 Identities = 52/124 (41%), Positives = 77/124 (62%), Gaps = 3/124 (2%)

Query: 66  KSDLLSSLSTYKAKLRAYFHSWNPNDCSRNVYIKPNG-FTLHRNPVAQSTDAVRGKMGFY 124
           + D+L  +      L+   HSWN  D S N+++K +   T HR+PVAQSTD +RGK+G  
Sbjct: 6   RIDILLDMPPASRDLQLK-HSWNSEDRSLNIFVKEDDKLTFHRHPVAQSTDCIRGKVGLT 64

Query: 125 QGRHAWEVFW-QGPLGTVAVVGIATKDALLQSHGYLALIGSDSESWGWNIVDNRILHNGE 183
           +G H WE++W     GT AVVG+ T DA L S GY +L+GS  +SWGW++  N++ H+ +
Sbjct: 65  KGLHIWEIYWPTRQRGTHAVVGVCTADAPLHSVGYQSLVGSTEQSWGWDLGRNKLYHDSK 124

Query: 184 SQGS 187
           +   
Sbjct: 125 NCAG 128
>d2afja1 b.29.1.22 (A:12-224) SPRY domain-containing SOCS box protein 2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 213 Back     information, alignment and structure
>d1nexb1 a.158.1.1 (B:270-369) Cdc4 F-box and linker domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 100 Back     information, alignment and structure
>d2ovrb1 a.158.1.1 (B:2263-2364) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 102 Back     information, alignment and structure
>d1p22a1 a.158.1.1 (A:135-252) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 118 Back     information, alignment and structure
>d1fs1a1 a.158.1.1 (A:109-149) Skp2 {Human (Homo sapiens) [TaxId: 9606]} Length = 41 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query271
d2fnja1217 LD34464p {Fruit fly (Drosophila melanogaster) [Tax 99.94
d2iwgb1179 52 kDa Ro protein {Human (Homo sapiens) [TaxId: 96 99.93
d2fbea1188 Similar to Ret finger protein-like 1 {Human (Homo 99.91
d2afja1213 SPRY domain-containing SOCS box protein 2 {Mouse ( 99.86
d1fs1a141 Skp2 {Human (Homo sapiens) [TaxId: 9606]} 99.53
d1nexb1100 Cdc4 F-box and linker domains {Baker's yeast (Sacc 99.41
d2ovrb1102 F-box/WD repeat-containing protein 7, FBXW7 {Human 99.4
d1p22a1118 F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom 99.29
>d2fnja1 b.29.1.22 (A:35-251) LD34464p {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: SPRY domain
domain: LD34464p
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.94  E-value=3.5e-27  Score=205.77  Aligned_cols=156  Identities=35%  Similarity=0.680  Sum_probs=132.4

Q ss_pred             ccccccchHHHHHHHHhhhcCCCCCCceeEEeCC-CeEEeeCCCCccchhhhccccccCceeEEEEEEeC-CCCceEEEE
Q psy4214          68 DLLSSLSTYKAKLRAYFHSWNPNDCSRNVYIKPN-GFTLHRNPVAQSTDAVRGKMGFYQGRHAWEVFWQG-PLGTVAVVG  145 (271)
Q Consensus        68 dils~~P~~~~k~r~~~~~Wd~~~as~nI~LS~~-~~T~~~~P~~~st~qVrg~~gfs~G~HYWEV~~s~-~~Gt~~~vG  145 (271)
                      |++...|+ ..+..+++++||+.+++.++.|++| ..+++++|.++++++|||+++|++|+|||||++.. ..|+.++||
T Consensus         8 d~~~~~pp-~~~~~~~~~~wn~~~~~~~~~ls~~~~~~~~~~~~~~~~~~vrgt~g~ssGk~YWEV~v~~~~~~~~~~IG   86 (217)
T d2fnja1           8 DILLDMPP-ASRDLQLKHSWNSEDRSLNIFVKEDDKLTFHRHPVAQSTDCIRGKVGLTKGLHIWEIYWPTRQRGTHAVVG   86 (217)
T ss_dssp             HHHHHSCC-CCHHHHHHTSEEEEEECTTEEEETTEEEEEEECCCTTEEEEEEESCCBCSSEEEEEEECCGGGCTTCCEEE
T ss_pred             CeeecCCC-CCccccccccCChhcCCCCEEEeCCCceEEEeCCccccCCeEEEcccccCCcEEEEEEEecCCCCCeeEEE
Confidence            45566777 5666678999999999999999976 57788999999999999999999999999999975 567788999


Q ss_pred             EeccccccccCCCcceecCCCceeeEEecCCeeEeCCcccC--CCCCC-CCCCCCCCCCeEEEEEecccccccccceeEE
Q psy4214         146 IATKDALLQSHGYLALIGSDSESWGWNIVDNRILHNGESQG--SYPQL-NNPPKWEKESGLSWTVMTALYPLRRTMSSLG  222 (271)
Q Consensus       146 Va~~~~~l~~~g~~sllG~n~~SWgl~~~~~~~~Hng~~~~--~~p~~-~~~~~~~~~~rIGV~LD~~~~~~~~~~G~Ls  222 (271)
                      |+++.++++..++.+++|.|..||+|+..++..+|++....  .||.. ...+.|..+++|||.||       +++|+|+
T Consensus        87 V~~~~~~~~~~~~~~~~G~~~~s~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~gDvIGV~LD-------~d~gtLs  159 (217)
T d2fnja1          87 VCTADAPLHSVGYQSLVGSTEQSWGWDLGRNKLYHDSKNCAGVTYPAILKNDEAFLVPDKFLVALD-------MDEGTLS  159 (217)
T ss_dssp             EECTTSCSEEESSCCCTTSSTTEEEEETTTTEEEESTTTSCCEESSTTCCTTCCCCCCSEEEEEEE-------TTTTEEE
T ss_pred             EEecccCcccCCccccccCCCCcceEecCCCEEEecCCCccccccCcccccCCccCCCCEEEEEEe-------CCCCEEE
Confidence            99999999998999999999999999987788999986532  24432 22457888999999999       9999999


Q ss_pred             EEecCCccc
Q psy4214         223 WHSEDCQTK  231 (271)
Q Consensus       223 fy~~~~~~~  231 (271)
                      ||.++..+.
T Consensus       160 F~kNG~~lG  168 (217)
T d2fnja1         160 FIVDQQYLG  168 (217)
T ss_dssp             EEETTEEEE
T ss_pred             EEECCEEee
Confidence            999876643
>d2iwgb1 b.29.1.22 (B:4-182) 52 kDa Ro protein {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2fbea1 b.29.1.22 (A:1-188) Similar to Ret finger protein-like 1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2afja1 b.29.1.22 (A:12-224) SPRY domain-containing SOCS box protein 2 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1fs1a1 a.158.1.1 (A:109-149) Skp2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1nexb1 a.158.1.1 (B:270-369) Cdc4 F-box and linker domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2ovrb1 a.158.1.1 (B:2263-2364) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1p22a1 a.158.1.1 (A:135-252) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure