Psyllid ID: psy438

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------67
MSTKSIKIGFRTVELVQDHVDPNHLEKGRYFYFEVNKVPIYSKGSNLIPVDVLPERSNNESTIRDLLVSTKEANMNMLRVWGGGSEVELWWPNGYGEQPLYNLQITLASGVEMSTKSIKIGFRTVELIQDHVDPNHLEKGRYFYFEVNKVPIYSKGSNLIPVDILPERSNNESTIRDLLVSTKEANMNMLRVWGGGVYMSDYFYEPVDILPERSNNESTIRDLLVSTKEANMNMLRVWGGGVYMTRYTDMARHESTIRDLLVSTKEANMNMLRVWGGGVYMSDYFYETCDELGILIWQDMMFACNNYPATPTFLQSVRSEISQTVRRVQHHPCIAVWAGNNEMEGATIQKWYIRENPELYYKEYAELYVNTLKPIVLQYDPTRPYLTSSPTNGIESEKAKYALADNPYSNIYGDTHNYDYYQNLWDPSTAPKSRFCSEFGIQSLPQLSTFQKVATEADLASWRTPFFDSRQHLAGGTGILESSVGHQFEIGNLTLEYFAYLSQIYQAGAIKTITEQMRRDKGVLREDGSGHNMGALYWQLNDTCDELGILIWQDMMFACNNYPATPTFLQSVRSEISQTVRRVQHHPCIAVWAGNNEMEGATIQKWYIRENPELYYKEYAELYVNTLKPIVLQYDPTRPYLTSSPTNGIESEKAKYALADNPYSNIYGD
cccEEEEEEEEEEEEEEccccccccccccEEEEEEccEEEEEcccccccccccccccccHHHHHHHHHHHHHccccEEEEEcccccccccccccccccccEEEEEEEEcccEEEEEEEEEEEEEEEEEEEcccccccccccEEEEEEccEEEEEcccccccccccccccccHHHHHHHHHHHHHHccccEEEEcccccccccccccccccccccccccccccccccccccccEEEEEEEccccccccccccccHHHHHHHHHHHHHccccEEEEccccccccHHHHHHHHHHccEEEEccccccccccccHHHHHHHHHHHHHHHHHHcccccEEEEccccccccHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHcccccEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHcccccccccccHHHcccccccccHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccEEEEEEcccccccccccHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHcccccEEEEEEcccccHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHcccccEEcccccccccccccccccccccccccccc
ccccEEEEEEEEEEEEEEcccccccccccEEEEEEccEEEEEccccccccHcccccccHHHHHHHHHHHHHHccccEEEEEcccccccccccccccccccEEEEEEEEcccccEEEEEEEEEEEEEEEEEcccccccccccEEEEEEccEEEEEccccccccccccccccHHHHHHHHHHHHHHHHHcHHHHccccccccHHHHHHHHHHccEEEEEcccccccccccEEEEcccEEEEccccccccccccccHHHHHHHHHHHHHHHccEEEEHcccccccHHHHHHHHHHccEEEHHHHHHHHcccccHHHHHHHHHHHHHHHHHHcccccEEEEEcccHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccHHccccHHHHccccccHHHHccccccccHHHHHHHccHHHccccccHHHHHHccccccHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHcHHEEccccccHHHHHHHHHHHHHHcccEEEccccHHcccccccHHHHHHHHHHHHHHHHHHccccEEEEEEcccHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccc
mstksikiGFRTVELVqdhvdpnhlekgryfyfevnkvpiyskgsnlipvdvlpersnnesTIRDLLVSTKEANMNMLRvwgggsevelwwpngygeqplyNLQITLASGVEMSTKSIKIGFRTVELIqdhvdpnhlekgryfyfevnkvpiyskgsnlipvdilpersnnesTIRDLLVSTKEANMNMLRVwgggvymsdyfyepvdilpersnnesTIRDLLVSTKEANMNMLRVwgggvymtrytdmarhESTIRDLLVSTKEANMNMLRVwgggvymsdyFYETCDELGILIWQDMMFacnnypatptfLQSVRSEISQTVRRVQHHPciavwagnnemeGATIQKWYIRENPELYYKEYAELYVNTLKpivlqydptrpyltssptngiesekakyaladnpysniygdthnydyyqnlwdpstapksrfcsefgiqslpqlstfQKVATEadlaswrtpffdsrqhlaggtgilessvghqfeiGNLTLEYFAYLSQIYQAGAIKTITEQMRRdkgvlredgsghnmgALYWQLNDTCDELGILIWQDMMFacnnypatptfLQSVRSEISQTVRRVQHHPciavwagnnemeGATIQKWYIRENPELYYKEYAELYVNTLKpivlqydptrpyltssptngiesekakyaladnpysniygd
mstksikigfrtvelvqdhvdpnhleKGRYFYFEVNKVPIYskgsnlipvdvlpersnnesTIRDLLVSTKEANMNMLRVWGGGSEVELWWPNGYGEQPLYNLQITLASGVEMSTKSIKIGFRTVELIQDHVDPNHLEKGRYFYFEVNKVPIYSKgsnlipvdilpersnnesTIRDLLVSTKEANMNMLRVWGGGVYMSDYFYEPVDILPERSNNESTIRDLLVSTKEANMNMLRVWGGGVYMTRYTDMARHESTIRDLLVSTKEANMNMLRVWGGGVYMSDYFYETCDELGILIWQDMMFACNNYPATPTFLQSVRSEISQTVRRVQHHPciavwagnnemeGATIQKWYIRENPELYYKEYAELYVNTLKPIVLQYDPTRPYLTSSPTNGIESEKAKYALADNPYSNIYGDTHNYDYYQNLWDPSTAPKSRFCSEFGIQSLPQLSTFQKVATEADLASWRTPFFDSRQHLAGGTGILESSVGHQFEIGNLTLEYFAYLSQIYQAGAIKTITEQMRRDKGVLREDGSGHNMGALYWQLNDTCDELGILIWQDMMFACNNYPATPTFLQSVRSEISQTVRRVQHHPciavwagnnemeGATIQKWYIRENPELYYKEYAELYVNTLKPIVLQYDPTRPYLTSsptngiesekakyaladnpysniygd
MSTKSIKIGFRTVELVQDHVDPNHLEKGRYFYFEVNKVPIYSKGSNLIPVDVLPERSNNESTIRDLLVSTKEANMNMLRVWGGGSEVELWWPNGYGEQPLYNLQITLASGVEMSTKSIKIGFRTVELIQDHVDPNHLEKGRYFYFEVNKVPIYSKGSNLIPVDILPERSNNESTIRDLLVSTKEANMNMLRVWGGGVYMSDYFYEPVDILPERSNNESTIRDLLVSTKEANMNMLRVWGGGVYMTRYTDMARHESTIRDLLVSTKEANMNMLRVWGGGVYMSDYFYETCDELGILIWQDMMFACNNYPATPTFLQSVRSEISQTVRRVQHHPCIAVWAGNNEMEGATIQKWYIRENPELYYKEYAELYVNTLKPIVLQYDPTRPYLTSSPTNGIESEKAKYALADNPYSNIYGDTHNYDYYQNLWDPSTAPKSRFCSEFGIQSLPQLSTFQKVATEADLASWRTPFFDSRQHLAGGTGILESSVGHQFEIGNLTLEYFAYLSQIYQAGAIKTITEQMRRDKGVLREDGSGHNMGALYWQLNDTCDELGILIWQDMMFACNNYPATPTFLQSVRSEISQTVRRVQHHPCIAVWAGNNEMEGATIQKWYIRENPELYYKEYAELYVNTLKPIVLQYDPTRPYLTSSPTNGIESEKAKYALADNPYSNIYGD
*****IKIGFRTVELVQDHVDPNHLEKGRYFYFEVNKVPIYSKGSNLIPVDVLP*******TIRDLLVSTKEANMNMLRVWGGGSEVELWWPNGYGEQPLYNLQITLASGVEMSTKSIKIGFRTVELIQDHVDPNHLEKGRYFYFEVNKVPIYSKGSNLIPVDILPE******TIRDLLVSTKEANMNMLRVWGGGVYMSDYFYEPVDILPER****STIRDLLVSTKEANMNMLRVWGGGVYMTRYTDMARHESTIRDLLVSTKEANMNMLRVWGGGVYMSDYFYETCDELGILIWQDMMFACNNYPATPTFLQSVRSEISQTVRRVQHHPCIAVWAGNNEMEGATIQKWYIRENPELYYKEYAELYVNTLKPIVLQYDPTRPYLT***********AKYALADNPYSNIYGDTHNYDYYQNLWDPSTAPKSRFCSEFGIQSLPQLSTFQKVATEADLASWRTPFFDSRQHLAGGTGILESSVGHQFEIGNLTLEYFAYLSQIYQAGAIKTITEQMRRDKGVLREDGSGHNMGALYWQLNDTCDELGILIWQDMMFACNNYPATPTFLQSVRSEISQTVRRVQHHPCIAVWAGNNEMEGATIQKWYIRENPELYYKEYAELYVNTLKPIVLQYDPTRPYL****************************
*STKSIKIGFRTVELVQDHVDPNHLEKGRYFYFEVNKVPIYSKGSNLIPVDVLPERSNNESTIRDLLVSTKEANMNMLRVWGGGSEVELWWPNGYGEQPLYNLQITLASGVEMSTKSIKIGFRTVELIQDHVDPNHLEKGRYFYFEVNKVPIYSKGSNLIPVDILPERSNNESTIRDLLVSTKEANMNMLRVWGGGVYMSDYFYEPVDILPERSNNESTIRDLLVSTKEANMNMLRVWGGGVYMTRYTDMARHESTIRDLLVSTKEANMNMLRVWGGGVYMSDYFYETCDELGILIWQDMMFACNNYPATPTFLQSVRSEISQTVRRVQHHPCIAVWAGNNEMEGATIQKWYIRENPELYYKEYAELYVNTLKPIVLQYDPTRPYLTSSPTNGIESEKAKYALADNPYSNIYGDTHNYDYYQNLWDPSTAPKSRFCSEFGIQSLPQLSTFQKVATEADLASWRTPFFDSRQHLAGGTGILESSVGHQFEIGNLTLEYFAYLSQIYQAGAIKTITEQMRRDKGVLREDGSGHNMGALYWQLNDTCDELGILIWQDMMFACNNYPATPTFLQSVRSEISQTVRRVQHHPCIAVWAGNNEMEGATIQKWYIRENPELYYKEYAELYVNTLKPIVLQYDPTRPYLTSSPTNGIESEKAKYALADNPYS*IYGD
MSTKSIKIGFRTVELVQDHVDPNHLEKGRYFYFEVNKVPIYSKGSNLIPVDVLPERSNNESTIRDLLVSTKEANMNMLRVWGGGSEVELWWPNGYGEQPLYNLQITLASGVEMSTKSIKIGFRTVELIQDHVDPNHLEKGRYFYFEVNKVPIYSKGSNLIPVDILPERSNNESTIRDLLVSTKEANMNMLRVWGGGVYMSDYFYEPVDILPERSNNESTIRDLLVSTKEANMNMLRVWGGGVYMTRYTDMARHESTIRDLLVSTKEANMNMLRVWGGGVYMSDYFYETCDELGILIWQDMMFACNNYPATPTFLQSVRSEISQTVRRVQHHPCIAVWAGNNEMEGATIQKWYIRENPELYYKEYAELYVNTLKPIVLQYDPTRPYLTSSPTNGIESEKAKYALADNPYSNIYGDTHNYDYYQNLWDPSTAPKSRFCSEFGIQSLPQLSTFQKVATEADLASWRTPFFDSRQHLAGGTGILESSVGHQFEIGNLTLEYFAYLSQIYQAGAIKTITEQMRRDKGVLREDGSGHNMGALYWQLNDTCDELGILIWQDMMFACNNYPATPTFLQSVRSEISQTVRRVQHHPCIAVWAGNNEMEGATIQKWYIRENPELYYKEYAELYVNTLKPIVLQYDPTRPYLTSSPTNGIESEKAKYALADNPYSNIYGD
*STKSIKIGFRTVELVQDHVDPNHLEKGRYFYFEVNKVPIYSKGSNLIPVDVLPERSNNESTIRDLLVSTKEANMNMLRVWGGGSEVELWWPNGYGEQPLYNLQITLASGVEMSTKSIKIGFRTVELIQDHVDPNHLEKGRYFYFEVNKVPIYSKGSNLIPVDILPERSNNESTIRDLLVSTKEANMNMLRVWGGGVYMSDYFYEPVDILPERSNNESTIRDLLVSTKEANMNMLRVWGGGVYMTRYTDMARHESTIRDLLVSTKEANMNMLRVWGGGVYMSDYFYETCDELGILIWQDMMFACNNYPATPTFLQSVRSEISQTVRRVQHHPCIAVWAGNNEMEGATIQKWYIRENPELYYKEYAELYVNTLKPIVLQYDPTRPYLTSSPTNGIESEKAKYALADNPYSNIYGDTHNYDYYQNLWDPSTAPKSRFCSEFGIQSLPQLSTFQKVATEADLASWRTPFFDSRQHLAGGTGILESSVGHQFEIGNLTLEYFAYLSQIYQAGAIKTITEQMRRDKGVLREDGSGHNMGALYWQLNDTCDELGILIWQDMMFACNNYPATPTFLQSVRSEISQTVRRVQHHPCIAVWAGNNEMEGATIQKWYIRENPELYYKEYAELYVNTLKPIVLQYDPTRPYLTSS*************************
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MSTKSIKIGFRTVELVQDHVDPNHLEKGRYFYFEVNKVPIYSKGSNLIPVDVLPERSNNESTIRDLLVSTKEANMNMLRVWGGGSEVELWWPNGYGEQPLYNLQITLASGVEMSTKSIKIGFRTVELIQDHVDPNHLEKGRYFYFEVNKVPIYSKGSNLIPVDILPERSNNESTIRDLLVSTKEANMNMLRVWGGGVYMSDYFYEPVDILPERSNNESTIRDLLVSTKEANMNMLRVWGGGVYMTRYTDMARHESTIRDLLVSTKEANMNMLRVWGGGVYMSDYFYETCDELGILIWQDMMFACNNYPATPTFLQSVRSEISQTVRRVQHHPCIAVWAGNNEMEGATIQKWYIRENPELYYKEYAELYVNTLKPIVLQYDPTRPYLTSSPTNGIESEKAKYALADNPYSNIYGDTHNYDYYQNLWDPSTAPKSRFCSEFGIQSLPQLSTFQKVATEADLASWRTPFFDSRQHLAGGTGILESSVGHQFEIGNLTLEYFAYLSQIYQAGAIKTITEQMRRDKGVLREDGSGHNMGALYWQLNDTCDELGILIWQDMMFACNNYPATPTFLQSVRSEISQTVRRVQHHPCIAVWAGNNEMEGATIQKWYIRENPELYYKEYAELYVNTLKPIVLQYDPTRPYLTSSPTNGIESEKAKYALADNPYSNIYGD
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query669 2.2.26 [Sep-21-2011]
Q29444879 Beta-mannosidase OS=Bos t yes N/A 0.551 0.419 0.392 6e-78
Q95327879 Beta-mannosidase OS=Capra N/A N/A 0.551 0.419 0.386 3e-77
O00462879 Beta-mannosidase OS=Homo yes N/A 0.563 0.428 0.370 4e-73
Q4FZV0 881 Beta-mannosidase OS=Rattu yes N/A 0.563 0.427 0.353 4e-69
Q8K2I4879 Beta-mannosidase OS=Mus m yes N/A 0.563 0.428 0.355 6e-69
Q93324900 Probable beta-mannosidase yes N/A 0.550 0.408 0.328 1e-59
Q9UUZ3 931 Beta-mannosidase OS=Asper yes N/A 0.466 0.335 0.300 1e-34
Q0CI48783 Probable beta-mannosidase N/A N/A 0.460 0.393 0.317 1e-34
Q2UN00 914 Probable beta-mannosidase yes N/A 0.467 0.342 0.312 2e-34
A2QWU9 931 Probable beta-mannosidase yes N/A 0.466 0.335 0.297 2e-34
>sp|Q29444|MANBA_BOVIN Beta-mannosidase OS=Bos taurus GN=MANBA PE=1 SV=1 Back     alignment and function desciption
 Score =  292 bits (748), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 187/476 (39%), Positives = 242/476 (50%), Gaps = 107/476 (22%)

Query: 87  VELWWPNGYGEQPLYNLQIT--LASGVEMSTKSIKIGFRTVELIQDHVDPNHLEKGRYFY 144
           VE WWP+G+G Q  YN+ +   L  G+    KS K+ FRTVEL+++   P     G  FY
Sbjct: 287 VETWWPHGHGNQTGYNMSVIFELDGGLRFE-KSAKVYFRTVELVEE---PIQNSPGLSFY 342

Query: 145 FEVNKVPIYSKGSNLIPVDILPERSNNESTIRDLLVSTKEANMNMLRVWGGGVYMSDYFY 204
           F++N +PI+ KGSN IP D   +R  +                 MLR+            
Sbjct: 343 FKINGLPIFLKGSNWIPADSFQDRVTSA----------------MLRL------------ 374

Query: 205 EPVDILPERSNNESTIRDLLVSTKEANMNMLRVWGGGVYMTRYTDMARHESTIRDLLVST 264
                             LL S  +ANMN LRVWGG                        
Sbjct: 375 ------------------LLQSVVDANMNALRVWGG------------------------ 392

Query: 265 KEANMNMLRVWGGGVYMSDYFYETCDELGILIWQDMMFACNNYPATPTFLQSVRSEISQT 324
                        GVY  D FYE CDELGI+IWQD MFAC  YP    F+ SVR E++  
Sbjct: 393 -------------GVYEQDEFYELCDELGIMIWQDFMFACALYPTDKDFMDSVREEVTHQ 439

Query: 325 VRRVQHHPCIAVWAGNNEMEGATIQKWYIRENPEL--YYKEYAELYVNTLKPIVLQYDPT 382
           VRR++ HP I  W+GNNE E A +  WY  +   L  Y K+Y  LYV  ++ IVL+ D T
Sbjct: 440 VRRLKSHPSIITWSGNNENEAALMMGWYDTKPGYLQTYIKDYVTLYVKNIRTIVLEGDQT 499

Query: 383 RPYLTSSPTNGIESEKAKYALADNPYSNIYGDTHNYDYYQNLWDPSTAPKSRFCSEFGIQ 442
           RP++TSSPTNG ++  A+  L+ NPY   YGD H YDY  + W+  T PK+RF SE+G Q
Sbjct: 500 RPFITSSPTNGAKT-IAEGWLSPNPYDLNYGDVHFYDYVSDCWNWRTFPKARFVSEYGYQ 558

Query: 443 SLPQLSTFQKVATEADLASWRTPFFDSRQHLAGGTGILESSVGHQFEIGNLT--LEYFA- 499
           S P  ST +KV++E D  S+R+ F   RQHL  G   +   +   F++ N T  L  F  
Sbjct: 559 SWPSFSTLEKVSSEEDW-SYRSSFALHRQHLINGNNEMLHQIELHFKLPNSTDQLRRFKD 617

Query: 500 --YLSQIYQAGAIKTITEQMRRDKGVLREDGSGHNMGALYWQLNDTCDELGILIWQ 553
             YL+Q+ QA  +KT TE  RR +  +  +G GH MGALYWQLND        IWQ
Sbjct: 618 TLYLTQVMQAQCVKTETEFYRRSRSEIV-NGKGHTMGALYWQLND--------IWQ 664
Exoglycosidase that cleaves the single beta-linked mannose residue from the non-reducing end of all N-linked glycoprotein oligosaccharides.
Bos taurus (taxid: 9913)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 2EC: 5
>sp|Q95327|MANBA_CAPHI Beta-mannosidase OS=Capra hircus GN=MANBA PE=2 SV=1 Back     alignment and function description
>sp|O00462|MANBA_HUMAN Beta-mannosidase OS=Homo sapiens GN=MANBA PE=1 SV=3 Back     alignment and function description
>sp|Q4FZV0|MANBA_RAT Beta-mannosidase OS=Rattus norvegicus GN=Manba PE=2 SV=1 Back     alignment and function description
>sp|Q8K2I4|MANBA_MOUSE Beta-mannosidase OS=Mus musculus GN=Manba PE=2 SV=1 Back     alignment and function description
>sp|Q93324|MANBA_CAEEL Probable beta-mannosidase OS=Caenorhabditis elegans GN=C33G3.4 PE=1 SV=1 Back     alignment and function description
>sp|Q9UUZ3|MANBA_ASPNG Beta-mannosidase OS=Aspergillus niger GN=mndA PE=1 SV=1 Back     alignment and function description
>sp|Q0CI48|MANBA_ASPTN Probable beta-mannosidase A OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=mndA PE=3 SV=1 Back     alignment and function description
>sp|Q2UN00|MANBA_ASPOR Probable beta-mannosidase A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=mndA PE=3 SV=1 Back     alignment and function description
>sp|A2QWU9|MANBA_ASPNC Probable beta-mannosidase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=mndA PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query669
383859551 1624 PREDICTED: beta-mannosidase-like [Megach 0.550 0.226 0.401 2e-86
328715195 899 PREDICTED: beta-mannosidase-like [Acyrth 0.554 0.412 0.391 3e-86
328784350 1625 PREDICTED: beta-mannosidase-like [Apis m 0.550 0.226 0.394 3e-86
307193411 1648 Beta-mannosidase [Harpegnathos saltator] 0.550 0.223 0.412 5e-86
380025408 1357 PREDICTED: LOW QUALITY PROTEIN: beta-man 0.550 0.271 0.394 6e-86
340713893 1628 PREDICTED: beta-mannosidase-like [Bombus 0.545 0.224 0.394 1e-85
350418842 1629 PREDICTED: beta-mannosidase-like [Bombus 0.550 0.225 0.388 5e-85
307187158 1577 Beta-mannosidase [Camponotus floridanus] 0.550 0.233 0.402 6e-84
345489477 1598 PREDICTED: beta-mannosidase-like [Nasoni 0.551 0.230 0.378 1e-83
427785415 924 Putative beta-mannosidase [Rhipicephalus 0.593 0.429 0.364 2e-82
>gi|383859551|ref|XP_003705257.1| PREDICTED: beta-mannosidase-like [Megachile rotundata] Back     alignment and taxonomy information
 Score =  326 bits (836), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 185/461 (40%), Positives = 236/461 (51%), Gaps = 93/461 (20%)

Query: 87   VELWWPNGYGEQPLYNLQITLASGVEMSTKSIKIGFRTVELIQDHVDPNHLEKGRYFYFE 146
            V+ WWPNGYG Q LY+L +T ++  +   K+++IGFRTVELIQ       L+KG  FYF+
Sbjct: 1010 VDNWWPNGYGNQTLYSLTVTASTSTDTKKKTVQIGFRTVELIQKP-----LKKGLSFYFQ 1064

Query: 147  VNKVPIYSKGSNLIPVDILPERSNNESTIRDLLVSTKEANMNMLRVWGGGVYMSDYFYEP 206
            +N VPI++KGSN I                                             P
Sbjct: 1065 INGVPIFAKGSNFI---------------------------------------------P 1079

Query: 207  VDILPERSNNESTIRDLLVSTKEANMNMLRVWGGGVYMTRYTDMARHESTIRDLLVSTKE 266
              + PE S    TI  LL S K+ANMNMLRVWGG                          
Sbjct: 1080 ASVFPELSAEPETIEHLLASAKQANMNMLRVWGG-------------------------- 1113

Query: 267  ANMNMLRVWGGGVYMSDYFYETCDELGILIWQDMMFACNNYPATPTFLQSVRSEISQTVR 326
                       G+Y S+ FY   D  GI+IWQD MFAC  YP T  FL SV+ E+ Q VR
Sbjct: 1114 -----------GLYESELFYNLADRYGIMIWQDFMFACGMYPTTSEFLDSVKEEVIQNVR 1162

Query: 327  RVQHHPCIAVWAGNNEMEGATIQKWYIRENPELYYKEYAELYVNTLKPIVLQYDPTRPYL 386
            R++ HP I +WAGNNE E A    WY      +Y  +Y +LYVN +K IV Q D TRP+L
Sbjct: 1163 RLKVHPSIVLWAGNNENEAALYGDWYGTGTKSIYKTDYIKLYVNVIKEIVNQLDSTRPFL 1222

Query: 387  TSSPTNGIESEKAKYALADNPYSNIYGDTHNYDYYQNLWDPSTAPKSRFCSEFGIQSLPQ 446
             SSP+NG+ +E+  Y +  +PYS  YGD H Y+Y  N WD    P+ RF SE+G QSLP 
Sbjct: 1223 VSSPSNGLYTEQYNY-IGKDPYSMFYGDVHYYNYINNGWDVHQYPRPRFSSEYGFQSLPS 1281

Query: 447  LSTFQKVATEADLASWRTPFFDSRQHLAGGTGILESSVGHQFEIGNLTLEY-----FAYL 501
            + T   V  +AD  +  + F   RQHLA G   L++ +   F+I     +      + YL
Sbjct: 1282 IFTMLSVTEKADDLNVDSKFVRHRQHLASGMSYLKTLISQNFKIPETQNKVQGFVNYIYL 1341

Query: 502  SQIYQAGAIKTITEQMRRDKGVLREDGSGHNMGALYWQLND 542
            SQI QA ++K  TE  R+ K  L E G G  MGALYWQLND
Sbjct: 1342 SQINQAVSVKIQTEYYRQSKTELNEIGEGMTMGALYWQLND 1382

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|328715195|ref|XP_001945791.2| PREDICTED: beta-mannosidase-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|328784350|ref|XP_392850.4| PREDICTED: beta-mannosidase-like [Apis mellifera] Back     alignment and taxonomy information
>gi|307193411|gb|EFN76236.1| Beta-mannosidase [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|380025408|ref|XP_003696466.1| PREDICTED: LOW QUALITY PROTEIN: beta-mannosidase-like [Apis florea] Back     alignment and taxonomy information
>gi|340713893|ref|XP_003395469.1| PREDICTED: beta-mannosidase-like [Bombus terrestris] Back     alignment and taxonomy information
>gi|350418842|ref|XP_003491985.1| PREDICTED: beta-mannosidase-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|307187158|gb|EFN72401.1| Beta-mannosidase [Camponotus floridanus] Back     alignment and taxonomy information
>gi|345489477|ref|XP_001603021.2| PREDICTED: beta-mannosidase-like [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|427785415|gb|JAA58159.1| Putative beta-mannosidase [Rhipicephalus pulchellus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query669
UNIPROTKB|A6QLB0879 MANBA "Beta-mannosidase" [Bos 0.423 0.321 0.494 8.8e-96
UNIPROTKB|Q29444879 MANBA "Beta-mannosidase" [Bos 0.423 0.321 0.494 8.8e-96
UNIPROTKB|F1NBF1820 MANBA "Uncharacterized protein 0.434 0.354 0.450 2.1e-94
UNIPROTKB|F1PLE9885 MANBA "Uncharacterized protein 0.421 0.318 0.469 1.4e-93
ZFIN|ZDB-GENE-040426-721901 manba "mannosidase, beta A, ly 0.417 0.309 0.463 1e-92
UNIPROTKB|E9PFW2822 MANBA "Beta-mannosidase" [Homo 0.421 0.343 0.462 1.3e-92
UNIPROTKB|O00462879 MANBA "Beta-mannosidase" [Homo 0.421 0.320 0.462 1.3e-92
UNIPROTKB|F1S106878 LOC100524511 "Uncharacterized 0.417 0.317 0.467 4.4e-90
RGD|1305785881 Manba "mannosidase, beta A, ly 0.417 0.316 0.453 7.2e-88
MGI|MGI:88175879 Manba "mannosidase, beta A, ly 0.417 0.317 0.453 4.7e-85
UNIPROTKB|A6QLB0 MANBA "Beta-mannosidase" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
 Score = 697 (250.4 bits), Expect = 8.8e-96, Sum P(2) = 8.8e-96
 Identities = 145/293 (49%), Positives = 185/293 (63%)

Query:   257 IRDLLVSTKEANMNMLRVWGGGVYMSDYFYETCDELGILIWQDMMFACNNYPATPTFLQS 316
             +R LL S  +ANMN LRVWGGGVY  D FYE CDELGI+IWQD MFAC  YP    F+ S
Sbjct:   372 LRLLLQSVVDANMNALRVWGGGVYEQDEFYELCDELGIMIWQDFMFACALYPTDKDFMDS 431

Query:   317 VRSEISQTVRRVQHHPCIAVWAGNNEMEGATIQKWYIRENPEL--YYKEYAELYVNTLKP 374
             VR E++  VRR++ HP I  W+GNNE E A +  WY  +   L  Y K+Y  LYV  ++ 
Sbjct:   432 VREEVTHQVRRLKSHPSIITWSGNNENEAALMMGWYDTKPGYLQTYIKDYVTLYVKNIRT 491

Query:   375 IVLQYDPTRPYLTSSPTNGIESEKAKYALADNPYSNIYGDTHNYDYYQNLWDPSTAPKSR 434
             IVL+ D TRP++TSSPTNG ++  A+  L+ NPY   YGD H YDY  + W+  T PK+R
Sbjct:   492 IVLEGDQTRPFITSSPTNGAKTI-AEGWLSPNPYDLNYGDVHFYDYVSDCWNWRTFPKAR 550

Query:   435 FCSEFGIQSLPQLSTFQKVATEADLASWRTPFFDSRQHLAGGTGILESSVGHQFEIGNLT 494
             F SE+G QS P  ST +KV++E D  S+R+ F   RQHL  G   +   +   F++ N T
Sbjct:   551 FVSEYGYQSWPSFSTLEKVSSEEDW-SYRSSFALHRQHLINGNNEMLHQIELHFKLPNST 609

Query:   495 --LEYFA---YLSQIYQAGAIKTITEQMRRDKGVLREDGSGHNMGALYWQLND 542
               L  F    YL+Q+ QA  +KT TE  RR +  +  +G GH MGALYWQLND
Sbjct:   610 DQLRRFKDTLYLTQVMQAQCVKTETEFYRRSRSEI-VNGKGHTMGALYWQLND 661
GO:0006516 "glycoprotein catabolic process" evidence=IEA
GO:0004567 "beta-mannosidase activity" evidence=IEA
GO:0005975 "carbohydrate metabolic process" evidence=IEA
UNIPROTKB|Q29444 MANBA "Beta-mannosidase" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1NBF1 MANBA "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1PLE9 MANBA "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040426-721 manba "mannosidase, beta A, lysosomal" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|E9PFW2 MANBA "Beta-mannosidase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|O00462 MANBA "Beta-mannosidase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1S106 LOC100524511 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
RGD|1305785 Manba "mannosidase, beta A, lysosomal" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
MGI|MGI:88175 Manba "mannosidase, beta A, lysosomal" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.2.1LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query669
COG3250808 COG3250, LacZ, Beta-galactosidase/beta-glucuronida 2e-27
COG3250 808 COG3250, LacZ, Beta-galactosidase/beta-glucuronida 3e-15
COG3250808 COG3250, LacZ, Beta-galactosidase/beta-glucuronida 6e-08
pfam02836297 pfam02836, Glyco_hydro_2_C, Glycosyl hydrolases fa 0.003
>gnl|CDD|225789 COG3250, LacZ, Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism] Back     alignment and domain information 
 Score =  117 bits (296), Expect = 2e-27
 Identities = 94/478 (19%), Positives = 142/478 (29%), Gaps = 142/478 (29%)

Query: 86  EVELWWPNGYGEQP-LYNLQITLAS-GVEMSTKSIKIGFRTVELIQDHVDPNHLEKGRYF 143
             +LW P    E P LY L +TL      +  ++++IGFRTVE+                
Sbjct: 249 NPKLWSP----EDPYLYRLVVTLKDANTLIDAEALRIGFRTVEIKDGL------------ 292

Query: 144 YFEVNKVPIYSKGSNLIPVDILPERSNNESTIRDLLVSTKEANMNMLRVWGGGVYMSDYF 203
              +N  P++ +G N    D +                            G         
Sbjct: 293 -LLINGKPVFIRGVNRHEDDPIL---------------------------GRVTDEDAM- 323

Query: 204 YEPVDILPERSNNESTIRDLLVSTKEANMNMLRVWGGGVYMTRYTDMARHESTIRDLLVS 263
                               L   KEANMN +R                           
Sbjct: 324 -----------------ERDLKLMKEANMNSVRTS------------------------- 341

Query: 264 TKEANMNMLRVWGGGVYMSDYFYETCDELGILIWQDMMFACNNYPATPTFLQSVRSEISQ 323
                             S+ FY+ CDELG+L+  + M   +  P  P + + V  E+ +
Sbjct: 342 --------------HYPNSEEFYDLCDELGLLVIDEAMIETHGMPDDPEWRKEVSEEVRR 387

Query: 324 TVRRVQHHPCIAVWAGNNE-MEGATIQKWY-----IRENPELYYKEYAELYVNTLKPIVL 377
            V R ++HP I +W+  NE   G+     Y           + Y+       + L P + 
Sbjct: 388 MVERDRNHPSIIIWSLGNESGHGSNHWALYRWFKASDPTRPVQYEGRGTEATDILSP-MY 446

Query: 378 QYDPTRPYLTSSPTNGIESEKAKYAL----ADNPYSNIYGDTHNYDYYQN--LWDPSTAP 431
           +      Y   SP   I  E A         D  Y  ++G+   Y   Q   +WD     
Sbjct: 447 ERVDEILYFPGSPRPLILCEYAHAMGNSYGGDYHYWGVFGE---YPRLQGGFIWD---WV 500

Query: 432 KSRFCS--EFGIQSLPQLSTFQKVATEADLASWRTPFFDSRQHLAGGTGILESSVGHQFE 489
             R     E G Q+      F     +          F  RQ   G             +
Sbjct: 501 DQRLIPIDETGNQAYAYGGDFGDYPNDRSF-ELNGLVFPDRQPNPGLK-----EAKVGTQ 554

Query: 490 IGNL----TLEYFAYLSQIYQAGAIKTITEQMRRDKGVLREDGSGHNMGALYWQLNDT 543
                   T + F   S+   A A +    ++R   G          +G+L WQLND 
Sbjct: 555 FWAFGDPKTFQGFLVTSENLFAEADRERLPKLRALLGET--------LGSLEWQLNDV 604

Length = 808
>gnl|CDD|225789 COG3250, LacZ, Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|225789 COG3250, LacZ, Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|217247 pfam02836, Glyco_hydro_2_C, Glycosyl hydrolases family 2, TIM barrel domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 669
KOG2230|consensus867 100.0
COG3250808 LacZ Beta-galactosidase/beta-glucuronidase [Carboh 100.0
PRK10150604 beta-D-glucuronidase; Provisional 100.0
PRK10340 1021 ebgA cryptic beta-D-galactosidase subunit alpha; R 100.0
PRK09525 1027 lacZ beta-D-galactosidase; Reviewed 100.0
PF02836298 Glyco_hydro_2_C: Glycosyl hydrolases family 2, TIM 100.0
KOG2230|consensus 867 99.89
PF02836 298 Glyco_hydro_2_C: Glycosyl hydrolases family 2, TIM 99.76
PRK10150 604 beta-D-glucuronidase; Provisional 99.75
PRK10340 1021 ebgA cryptic beta-D-galactosidase subunit alpha; R 99.69
PRK09525 1027 lacZ beta-D-galactosidase; Reviewed 99.64
COG3250 808 LacZ Beta-galactosidase/beta-glucuronidase [Carboh 99.62
PF03198314 Glyco_hydro_72: Glucanosyltransferase; InterPro: I 99.06
PF00703110 Glyco_hydro_2: Glycosyl hydrolases family 2; Inter 99.02
PF00150281 Cellulase: Cellulase (glycosyl hydrolase family 5) 98.56
PF02449374 Glyco_hydro_42: Beta-galactosidase; InterPro: IPR0 98.24
PF14488166 DUF4434: Domain of unknown function (DUF4434) 97.77
PLN03059 840 beta-galactosidase; Provisional 97.77
KOG2024|consensus297 97.54
PF01301319 Glyco_hydro_35: Glycosyl hydrolases family 35; Int 97.49
COG1874 673 LacA Beta-galactosidase [Carbohydrate transport an 97.48
COG3934 587 Endo-beta-mannanase [Carbohydrate transport and me 97.15
PF1287688 Cellulase-like: Sugar-binding cellulase-like; Inte 96.76
PF1287688 Cellulase-like: Sugar-binding cellulase-like; Inte 96.44
KOG0496|consensus 649 93.82
PF07745332 Glyco_hydro_53: Glycosyl hydrolase family 53; Inte 93.13
PF13204289 DUF4038: Protein of unknown function (DUF4038); PD 92.95
PF00150281 Cellulase: Cellulase (glycosyl hydrolase family 5) 91.28
COG3534501 AbfA Alpha-L-arabinofuranosidase [Carbohydrate tra 91.08
PF02449 374 Glyco_hydro_42: Beta-galactosidase; InterPro: IPR0 90.44
COG5309305 Exo-beta-1,3-glucanase [Carbohydrate transport and 90.37
TIGR03356427 BGL beta-galactosidase. 89.43
COG3867403 Arabinogalactan endo-1,4-beta-galactosidase [Carbo 83.31
PRK13511469 6-phospho-beta-galactosidase; Provisional 82.99
>KOG2230|consensus Back     alignment and domain information 
Probab=100.00  E-value=2.6e-73  Score=613.28  Aligned_cols=398  Identities=44%  Similarity=0.763  Sum_probs=356.4

Q ss_pred             EEEEecCCcceEEEEEEecCCCCccccCCCCCCCCCcEEEEEEEEeCcEEEEEEEEEEEEEEEEeeecCCCccccCCceE
Q psy438           64 RDLLVSTKEANMNMLRVWGGGSEVELWWPNGYGEQPLYNLQITLASGVEMSTKSIKIGFRTVELIQDHVDPNHLEKGRYF  143 (669)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~p~lW~p~g~g~P~LY~l~~~l~~g~~~d~~~~~~G~R~i~~~~~~~~~~~~~~G~~~  143 (669)
                      -.+.+.+++..+++...+  ..+|+.|||+|+|.+.||.+++..  |+...  +.++|||++++.+++..+   ++|+.|
T Consensus       258 Y~i~Lq~~k~i~~l~i~~--~~~~e~wwp~g~g~q~~y~~~v~~--gg~~~--ekki~frtvelv~~p~kp---~~g~nf  328 (867)
T KOG2230|consen  258 YRLSLQTSKNIMSLSIPM--EHEPERWWPNGMGEQKLYDVVVSM--GGQVK--EKKIGFKTVELVQDPKKP---EKGRNF  328 (867)
T ss_pred             EEEEeccccceeeecccc--cccccccCCCCCCcceeEEEEEec--Cceee--eeeeeeEEEEEeecCCCC---CCCcee
Confidence            445677888777776655  378999999999999999999887  55443  339999999999987665   689999


Q ss_pred             EEEEcCEEeEeccccccCCCCCCCCCCcchhhhhhhhhhhhhhccceeecCCccccccccCCCCcCCcccCCCcchhhhh
Q psy438          144 YFEVNKVPIYSKGSNLIPVDILPERSNNESTIRDLLVSTKEANMNMLRVWGGGVYMSDYFYEPVDILPERSNNESTIRDL  223 (669)
Q Consensus       144 ~~~lNG~~v~~rG~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (669)
                      ||.+||.|+|+||+||+|.+.|..|.+.                                                    
T Consensus       329 yfkin~~pvflkg~nwip~s~f~dr~t~----------------------------------------------------  356 (867)
T KOG2230|consen  329 YFKINDEPVFLKGTNWIPVSMFRDRENI----------------------------------------------------  356 (867)
T ss_pred             EEEEcCcEEEeecCCccChHHHHhhHHH----------------------------------------------------
Confidence            9999999999999999998887655433                                                    


Q ss_pred             hhhhhhhhhhhhhhcCCccccccccccccchHHHHHHHHHHHHcCCCEEEccCCCCCCcHHHHHHHHHcCCEEEeecccc
Q psy438          224 LVSTKEANMNMLRVWGGGVYMTRYTDMARHESTIRDLLVSTKEANMNMLRVWGGGVYMSDYFYETCDELGILIWQDMMFA  303 (669)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~l~~~k~~g~N~iR~~~g~~~~~~~~~~~cDe~Gilv~~e~~~~  303 (669)
                                                     +.++.+|++++++||||||+||||.|++++||++||++|||||||+||+
T Consensus       357 -------------------------------~~~~~LL~Sv~e~~MN~lRVWGGGvYEsd~FY~lad~lGilVWQD~MFA  405 (867)
T KOG2230|consen  357 -------------------------------AKTEFLLDSVAEVGMNMLRVWGGGVYESDYFYQLADSLGILVWQDMMFA  405 (867)
T ss_pred             -------------------------------HHHHHHHHHHHHhCcceEEEecCccccchhHHHHhhhccceehhhhHHH
Confidence                                           3688899999999999999999999999999999999999999999999


Q ss_pred             cCCCCCChHHHHHHHHHHHHHHHHhCCCcceEeecccCCcchhhhhhhccc--cChhhHHHHHHHHHHHHHHHHHHhhCC
Q psy438          304 CNNYPATPTFLQSVRSEISQTVRRVQHHPCIAVWAGNNEMEGATIQKWYIR--ENPELYYKEYAELYVNTLKPIVLQYDP  381 (669)
Q Consensus       304 ~~~~p~~~~~~~~~~~~~~~~v~r~rnHPSi~~W~~~NE~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~v~~~Dp  381 (669)
                      |+.||.+++|++++++|++..+.|+++||||++|+++||.+.+..++|+..  +....+.++|..+|++.|.++++.-|+
T Consensus       406 CAlYPt~~eFl~sv~eEV~yn~~Rls~HpSviIfsgNNENEaAl~~nWy~~sf~~~~~~~kdyvlly~~~i~el~l~~~~  485 (867)
T KOG2230|consen  406 CALYPTNDEFLSSVREEVRYNAMRLSHHPSVIIFSGNNENEAALVQNWYGTSFERDRFESKDYVLLYANVIHELKLVSHS  485 (867)
T ss_pred             hhcccCcHHHHHHHHHHHHHHHHhhccCCeEEEEeCCCccHHHHHhhhhcccccccchhhhhhhHHHHHHHHHHHhhcCC
Confidence            999999999999999999999999999999999999999999999999932  344456678889999999999999999


Q ss_pred             CCCEEecCCCCCcccccccccccCCCCCCCCCcccccccccccCCCCCCCCCccccccccCCCCCcchhcccCCcccccC
Q psy438          382 TRPYLTSSPTNGIESEKAKYALADNPYSNIYGDTHNYDYYQNLWDPSTAPKSRFCSEFGIQSLPQLSTFQKVATEADLAS  461 (669)
Q Consensus       382 tRp~~~~S~~~~~~~~~~~~~~~~~py~~~~gd~h~y~~~~~~~~~~~~~~~~f~sE~G~~s~p~~~sl~~~~~~~~~~~  461 (669)
                      +||++.|||.+|..++...| ++.||++..+||+|+|+|..++|+...||+|||+||||+||+|+.+++++..+++|| .
T Consensus       486 srPfi~SSPsNG~ete~e~~-VS~NP~dn~~GDVHfYdy~~d~W~~~ifp~pRfaSEyG~QS~P~~~t~~~~~~e~Dw-~  563 (867)
T KOG2230|consen  486 SRPFIVSSPSNGKETEPENY-VSSNPQDNQNGDVHFYDYTKDGWDPGIFPRPRFASEYGFQSFPGAYTWQRSKGEDDW-L  563 (867)
T ss_pred             CCCceecCCCCCcccCcccc-ccCCCccccCCceEeeehhhccCCCCcccCchhhhhcCcccCccHHHHHhccCccch-h
Confidence            99999999999999998899 999999999999999999999999999999999999999999999999999999999 8


Q ss_pred             CCCcccccccccCCchHHHHHHHhhhcCCCCcc-----HHHHHHHhhHhHHHHHHHHHHHHHhccccc-ccCCCCCCCCC
Q psy438          462 WRTPFFDSRQHLAGGTGILESSVGHQFEIGNLT-----LEYFAYLSQIYQAGAIKTITEQMRRDKGVL-REDGSGHNMGA  535 (669)
Q Consensus       462 ~~~~~~~h~~~~~~G~~~~~~~i~~~yg~P~d~-----ledFvy~SQvmQae~~R~~iE~~Rr~~n~~-R~~g~~~~sG~  535 (669)
                      .+|.++.|||||++|+..++.++.+|+++|.+.     .+..+|.||++|++|+|...|+|||.++.. |+  .+++||+
T Consensus       564 ~~sk~~~HRQHHpgGn~~~l~~v~~HlplP~s~~~~~~~k~i~YfsQV~Qa~a~KteTe~YRr~R~t~~~~--~g~tMgA  641 (867)
T KOG2230|consen  564 LGSKLITHRQHHPGGNVPVLALVERHLPLPFSENENYATKLIAYFSQVAQAMATKTETELYRRLRDTPHRT--LGNTMGA  641 (867)
T ss_pred             hccceeeeeccCCCCcchHHHHHHhcCCCCCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhccCchhh--hccchhe
Confidence            999999999999999999999999999999764     666789999999999999999999976654 33  5678999


Q ss_pred             eeEeeccccCccceEehhhhhhhhc
Q psy438          536 LYWQLNDTCDELGILIWQDMMFACN  560 (669)
Q Consensus       536 LyWq~nd~~D~~GilvW~E~~~~~~  560 (669)
                      +||||||.|-.   -.|+.+.+...
T Consensus       642 lYWQLNDvW~A---PsWssidf~gn  663 (867)
T KOG2230|consen  642 LYWQLNDVWVA---PSWSSIDFYGN  663 (867)
T ss_pred             eeeeeccEEec---CcceeeeccCc
Confidence            99999999887   45776665443

>COG3250 LacZ Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK10150 beta-D-glucuronidase; Provisional Back     alignment and domain information
>PRK10340 ebgA cryptic beta-D-galactosidase subunit alpha; Reviewed Back     alignment and domain information
>PRK09525 lacZ beta-D-galactosidase; Reviewed Back     alignment and domain information
>PF02836 Glyco_hydro_2_C: Glycosyl hydrolases family 2, TIM barrel domain; InterPro: IPR006103 O-Glycosyl hydrolases 3 Back     alignment and domain information
>KOG2230|consensus Back     alignment and domain information
>PF02836 Glyco_hydro_2_C: Glycosyl hydrolases family 2, TIM barrel domain; InterPro: IPR006103 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PRK10150 beta-D-glucuronidase; Provisional Back     alignment and domain information
>PRK10340 ebgA cryptic beta-D-galactosidase subunit alpha; Reviewed Back     alignment and domain information
>PRK09525 lacZ beta-D-galactosidase; Reviewed Back     alignment and domain information
>COG3250 LacZ Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF03198 Glyco_hydro_72: Glucanosyltransferase; InterPro: IPR004886 This family is a group of yeast glycolipid proteins anchored to the membrane Back     alignment and domain information
>PF00703 Glyco_hydro_2: Glycosyl hydrolases family 2; InterPro: IPR006102 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF00150 Cellulase: Cellulase (glycosyl hydrolase family 5); InterPro: IPR001547 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF02449 Glyco_hydro_42: Beta-galactosidase; InterPro: IPR013529 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF14488 DUF4434: Domain of unknown function (DUF4434) Back     alignment and domain information
>PLN03059 beta-galactosidase; Provisional Back     alignment and domain information
>KOG2024|consensus Back     alignment and domain information
>PF01301 Glyco_hydro_35: Glycosyl hydrolases family 35; InterPro: IPR001944 O-Glycosyl hydrolases 3 Back     alignment and domain information
>COG1874 LacA Beta-galactosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG3934 Endo-beta-mannanase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF12876 Cellulase-like: Sugar-binding cellulase-like; InterPro: IPR024778 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF12876 Cellulase-like: Sugar-binding cellulase-like; InterPro: IPR024778 O-Glycosyl hydrolases 3 Back     alignment and domain information
>KOG0496|consensus Back     alignment and domain information
>PF07745 Glyco_hydro_53: Glycosyl hydrolase family 53; InterPro: IPR011683 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF13204 DUF4038: Protein of unknown function (DUF4038); PDB: 3KZS_D Back     alignment and domain information
>PF00150 Cellulase: Cellulase (glycosyl hydrolase family 5); InterPro: IPR001547 O-Glycosyl hydrolases 3 Back     alignment and domain information
>COG3534 AbfA Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF02449 Glyco_hydro_42: Beta-galactosidase; InterPro: IPR013529 O-Glycosyl hydrolases 3 Back     alignment and domain information
>COG5309 Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR03356 BGL beta-galactosidase Back     alignment and domain information
>COG3867 Arabinogalactan endo-1,4-beta-galactosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK13511 6-phospho-beta-galactosidase; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query669
2je8_A848 Structure Of A Beta-Mannosidase From Bacteroides Th 3e-43
2je8_A 848 Structure Of A Beta-Mannosidase From Bacteroides Th 4e-17
2vjx_A846 Structural And Biochemical Evidence For A Boat-Like 4e-43
2vjx_A 846 Structural And Biochemical Evidence For A Boat-Like 4e-17
2wbk_A847 Structure Of The Michaelis Complex Of Beta-Mannosid 8e-43
2wbk_A 847 Structure Of The Michaelis Complex Of Beta-Mannosid 4e-17
2vqu_A846 Structural And Biochemical Evidence For A Boat-Like 1e-41
2vqu_A 846 Structural And Biochemical Evidence For A Boat-Like 4e-17
3cmg_A667 Crystal Structure Of Putative Beta-Galactosidase Fr 5e-05
3cmg_A 667 Crystal Structure Of Putative Beta-Galactosidase Fr 3e-04
3fn9_A692 Crystal Structure Of Putative Beta-galactosidase Fr 1e-04
3gm8_A801 Crystal Structure Of A Beta-glycosidase From Bacter 5e-04
>pdb|2JE8|A Chain A, Structure Of A Beta-Mannosidase From Bacteroides Thetaiotaomicron Length = 848 Back     alignment and structure 
Iteration: 1

 Score =  173 bits (438), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 142/506 (28%), Positives = 224/506 (44%), Gaps = 119/506 (23%)
Query: 48  IPVDVLPERSNNESTIRDLLVS-TKEANMNMLRVWGGGSEVELWWPNGYGEQPLYNLQIT 106
           IP +V    S N +T+ ++    T +  +N + +    +    W PNG+G   LY+    
Sbjct: 231 IPAEVRVNVSLNGTTVTEVKQQVTLQPGINHITLPAEVTNPVRWMPNGWGTPTLYDFSAQ 290
Query: 107 LASGVEM-STKSIKIGFRTVELIQDHVDPNHLEKGRYFYFEVNKVPIYSKGSNLIPVD-I 164
           +A G  + + +S +IG RT+ ++ +       + G  FYFEVN +P+++KG+N IP D +
Sbjct: 291 IACGDRIVAEQSHRIGLRTIRVVNEKD-----KDGESFYFEVNGIPMFAKGANYIPQDAL 345
Query: 165 LPERSNNESTIRDLLVSTKEANMNMLRVWGGGVYMSDYFYEPVDILPERSNNESTIRDLL 224
           LP                                         ++  ER   ++  RD+ 
Sbjct: 346 LP-----------------------------------------NVTTERY--QTLFRDM- 361
Query: 225 VSTKEANMNMLRVWGGGVYMTRYTDMARHESTIRDLLVSTKEANMNMLRVWGGGVYMSDY 284
              KEANMNM+R+WGGG Y                      E N+               
Sbjct: 362 ---KEANMNMVRIWGGGTY----------------------ENNL--------------- 381
Query: 285 FYETCDELGILIWQDMMFACNNYPATPTFLQSVRSEISQTVRRVQHHPCIAVWAGNNEME 344
           FY+  DE GIL+WQD MFAC  YP+ PTFL+ V +E    +RR+++H  +A+W GNNE+ 
Sbjct: 382 FYDLADENGILVWQDFMFACTPYPSDPTFLKRVEAEAVYNIRRLRNHASLAMWCGNNEIL 441
Query: 345 GATIQKWYIREN--PELY---YKEYAELYVNTLKPIVLQYDPTRPYLTSSPTNGIESEKA 399
            A ++ W   +   PE+Y      Y +L+   L   V ++D  R Y+ SSP         
Sbjct: 442 EA-LKYWGFEKKFTPEVYQGLMHGYDKLFRELLPSTVKEFDSDRFYVHSSPY-------- 492
Query: 400 KYALADNPYSNIYGDTHNYD--YYQNLWDPSTAPKSRFCSEFGIQSLPQLSTFQKVATEA 457
             A    P S   GD+HN+   Y +  ++       RF SEFG QS P++ T    A   
Sbjct: 493 -LANWGRPESWGTGDSHNWGVWYGKKPFESLDTDLPRFMSEFGFQSFPEMKTIAAFAAPE 551
Query: 458 DLASWRTPFFDSRQHLAGGTGILESSVGHQFEIGNLTLEYFAYLSQIYQAGAIKTITEQM 517
           D     +   ++ Q  + G  ++ + +   + I   + E F Y+  + Q   ++   E  
Sbjct: 552 DYQI-ESEVMNAHQKSSIGNSLIRTYMERDYIIPE-SFEDFVYVGLVLQGQGMRHGLEAH 609
Query: 518 RRDKGVLREDGSGHNMGALYWQLNDT 543
           RR++         + MG LYWQLND+
Sbjct: 610 RRNR--------PYCMGTLYWQLNDS 627
>pdb|2JE8|A Chain A, Structure Of A Beta-Mannosidase From Bacteroides Thetaiotaomicron Length = 848 Back     alignment and structure
>pdb|2VJX|A Chain A, Structural And Biochemical Evidence For A Boat-Like Transition State In Beta-Mannosidases Length = 846 Back     alignment and structure
>pdb|2VJX|A Chain A, Structural And Biochemical Evidence For A Boat-Like Transition State In Beta-Mannosidases Length = 846 Back     alignment and structure
>pdb|2WBK|A Chain A, Structure Of The Michaelis Complex Of Beta-Mannosidase, Man2a, Provides Insight Into The Conformational Itinerary Of Mannoside Hydrolysis Length = 847 Back     alignment and structure
>pdb|2WBK|A Chain A, Structure Of The Michaelis Complex Of Beta-Mannosidase, Man2a, Provides Insight Into The Conformational Itinerary Of Mannoside Hydrolysis Length = 847 Back     alignment and structure
>pdb|2VQU|A Chain A, Structural And Biochemical Evidence For A Boat-Like Transition State In Beta-Mannosidases Length = 846 Back     alignment and structure
>pdb|2VQU|A Chain A, Structural And Biochemical Evidence For A Boat-Like Transition State In Beta-Mannosidases Length = 846 Back     alignment and structure
>pdb|3CMG|A Chain A, Crystal Structure Of Putative Beta-Galactosidase From Bacteroides Fragilis Length = 667 Back     alignment and structure
>pdb|3CMG|A Chain A, Crystal Structure Of Putative Beta-Galactosidase From Bacteroides Fragilis Length = 667 Back     alignment and structure
>pdb|3FN9|A Chain A, Crystal Structure Of Putative Beta-galactosidase From Bacteroides Fragilis Length = 692 Back     alignment and structure
>pdb|3GM8|A Chain A, Crystal Structure Of A Beta-glycosidase From Bacteroides Vulgatus Length = 801 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query669
2je8_A848 Beta-mannosidase; glycoside hydrolase, hydrolase; 1e-80
2je8_A 848 Beta-mannosidase; glycoside hydrolase, hydrolase; 3e-30
2je8_A848 Beta-mannosidase; glycoside hydrolase, hydrolase; 2e-13
2vzs_A 1032 CSXA, EXO-beta-D-glucosaminidase; hydrolase, GH2, 1e-75
2vzs_A 1032 CSXA, EXO-beta-D-glucosaminidase; hydrolase, GH2, 5e-20
2vzs_A1032 CSXA, EXO-beta-D-glucosaminidase; hydrolase, GH2, 1e-15
3fn9_A692 Putative beta-galactosidase; structural genomics, 1e-12
3fn9_A 692 Putative beta-galactosidase; structural genomics, 2e-10
3cmg_A667 Putative beta-galactosidase; structural genomics, 7e-12
3cmg_A 667 Putative beta-galactosidase; structural genomics, 2e-10
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-11
3hn3_A613 Beta-G1, beta-glucuronidase; lysosomal enzyme, aci 7e-09
3hn3_A 613 Beta-G1, beta-glucuronidase; lysosomal enzyme, aci 3e-05
3hn3_A613 Beta-G1, beta-glucuronidase; lysosomal enzyme, aci 6e-04
3gm8_A 801 Glycoside hydrolase family 2, candidate beta-GLYC; 2e-08
3gm8_A 801 Glycoside hydrolase family 2, candidate beta-GLYC; 4e-08
3lpf_A605 Beta-glucuronidase; alpha/beta barrel, sugar-bindi 6e-06
3lpf_A605 Beta-glucuronidase; alpha/beta barrel, sugar-bindi 1e-05
3bga_A 1010 Beta-galactosidase; NYSGXRC, protein structure ini 9e-06
3bga_A 1010 Beta-galactosidase; NYSGXRC, protein structure ini 1e-04
3oba_A 1032 Beta-galactosidase; TIM barrel, tetramer, GH2, gly 2e-05
2w61_A555 GAS2P, glycolipid-anchored surface protein 2; glyc 3e-05
1yq2_A 1024 Beta-galactosidase; glycosyl hydrolase family 2, T 7e-05
1jz7_A 1023 Lactase, beta-galactosidase, LACZ; TIM barrel (alp 1e-04
1jz7_A 1023 Lactase, beta-galactosidase, LACZ; TIM barrel (alp 4e-04
>2je8_A Beta-mannosidase; glycoside hydrolase, hydrolase; HET: B3P; 1.7A {Bacteroides thetaiotaomicron} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2vr4_A* 2vl4_A* 2vmf_A* 2vo5_A* 2vot_A* 2vqt_A* 2vjx_A* 2vqu_A* 2wbk_A* Length = 848 Back     alignment and structure
 Score =  272 bits (695), Expect = 1e-80
 Identities = 130/526 (24%), Positives = 209/526 (39%), Gaps = 117/526 (22%)

Query: 86  EVELWWPNGYGEQPLYNLQITLASGV-EMSTKSIKIGFRTVELIQDHVDPNHLEKGRYFY 144
               W PNG+G   LY+    +A G   ++ +S +IG RT+ ++ +       + G  FY
Sbjct: 270 NPVRWMPNGWGTPTLYDFSAQIACGDRIVAEQSHRIGLRTIRVVNEK-----DKDGESFY 324

Query: 145 FEVNKVPIYSKGSNLIPVDILPERSNNESTIRDLLVSTKEANMNMLRVWGGGVYMSDYFY 204
           FEVN +P+++KG+N IP D L      E                                
Sbjct: 325 FEVNGIPMFAKGANYIPQDALLPNVTTE-------------------------------- 352

Query: 205 EPVDILPERSNNESTIRDLLVSTKEANMNMLRVWGGGVYMTRYTDMARHESTIRDLLVST 264
                           + L    KEANMNM+R                            
Sbjct: 353 --------------RYQTLFRDMKEANMNMVR---------------------------- 370

Query: 265 KEANMNMLRVWGGGVYMSDYFYETCDELGILIWQDMMFACNNYPATPTFLQSVRSEISQT 324
                    +WGGG Y ++ FY+  DE GIL+WQD MFAC  YP+ PTFL+ V +E    
Sbjct: 371 ---------IWGGGTYENNLFYDLADENGILVWQDFMFACTPYPSDPTFLKRVEAEAVYN 421

Query: 325 VRRVQHHPCIAVWAGNNEMEGATIQKWY----IRENPELYYKEYAELYVNTLKPIVLQYD 380
           +RR+++H  +A+W GNNE+  A     +      E  +     Y +L+   L   V ++D
Sbjct: 422 IRRLRNHASLAMWCGNNEILEALKYWGFEKKFTPEVYQGLMHGYDKLFRELLPSTVKEFD 481

Query: 381 PTRPYLTSSPTNGIESEKAKYALADNPYSNIYGDTHNYD--YYQNLWDPSTAPKSRFCSE 438
             R Y+ SSP                P S   GD+HN+   Y +  ++       RF SE
Sbjct: 482 SDRFYVHSSPYLANW---------GRPESWGTGDSHNWGVWYGKKPFESLDTDLPRFMSE 532

Query: 439 FGIQSLPQLSTFQKVATEADLASWRTPFFDSRQHLAGGTGILESSVGHQFEIGNLTLEYF 498
           FG QS P++ T    A   D     +   ++ Q  + G  ++ + +   + I   + E F
Sbjct: 533 FGFQSFPEMKTIAAFAAPEDY-QIESEVMNAHQKSSIGNSLIRTYMERDYIIPE-SFEDF 590

Query: 499 AYLSQIYQAGAIKTITEQMRRDKGVLREDGSGHNMGALYWQLNDTCDELGILIWQDMMFA 558
            Y+  + Q   ++   E  RR++         + MG LYWQLND+   +    W  + + 
Sbjct: 591 VYVGLVLQGQGMRHGLEAHRRNR--------PYCMGTLYWQLNDSWPVVS---WSSIDYY 639

Query: 559 CNNYPATPTFLQSVRSEISQTVRRVQHHPCIAVWAGNNEMEGATIQ 604
            N         ++    +   +++        +    + ME  T++
Sbjct: 640 GNWKALHYQAKRAFAPVLINPIQQNDSLSVYLISDRLDTMEQMTLE 685
>2je8_A Beta-mannosidase; glycoside hydrolase, hydrolase; HET: B3P; 1.7A {Bacteroides thetaiotaomicron} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2vr4_A* 2vl4_A* 2vmf_A* 2vo5_A* 2vot_A* 2vqt_A* 2vjx_A* 2vqu_A* 2wbk_A* Length = 848 Back     alignment and structure
>2je8_A Beta-mannosidase; glycoside hydrolase, hydrolase; HET: B3P; 1.7A {Bacteroides thetaiotaomicron} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2vr4_A* 2vl4_A* 2vmf_A* 2vo5_A* 2vot_A* 2vqt_A* 2vjx_A* 2vqu_A* 2wbk_A* Length = 848 Back     alignment and structure
>2vzs_A CSXA, EXO-beta-D-glucosaminidase; hydrolase, GH2, glucosamine, glycoside hydrolase; HET: GCS; 1.85A {Amycolatopsis orientalis} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2x05_A* 2x09_A* 2vzo_A 2vzt_A* 2vzv_A* 2vzu_A* Length = 1032 Back     alignment and structure
>2vzs_A CSXA, EXO-beta-D-glucosaminidase; hydrolase, GH2, glucosamine, glycoside hydrolase; HET: GCS; 1.85A {Amycolatopsis orientalis} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2x05_A* 2x09_A* 2vzo_A 2vzt_A* 2vzv_A* 2vzu_A* Length = 1032 Back     alignment and structure
>2vzs_A CSXA, EXO-beta-D-glucosaminidase; hydrolase, GH2, glucosamine, glycoside hydrolase; HET: GCS; 1.85A {Amycolatopsis orientalis} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2x05_A* 2x09_A* 2vzo_A 2vzt_A* 2vzv_A* 2vzu_A* Length = 1032 Back     alignment and structure
>3fn9_A Putative beta-galactosidase; structural genomics, glycosidas hydrolase, PSI-2, protein structure initiative; 2.70A {Bacteroides fragilis} Length = 692 Back     alignment and structure
>3fn9_A Putative beta-galactosidase; structural genomics, glycosidas hydrolase, PSI-2, protein structure initiative; 2.70A {Bacteroides fragilis} Length = 692 Back     alignment and structure
>3cmg_A Putative beta-galactosidase; structural genomics, PSI-2, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides fragilis} Length = 667 Back     alignment and structure
>3cmg_A Putative beta-galactosidase; structural genomics, PSI-2, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides fragilis} Length = 667 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3hn3_A Beta-G1, beta-glucuronidase; lysosomal enzyme, acid hydrolase, glycosidase, disease mutat glycoprotein, hydrolase, lysosome, mucopolysaccharidosis; HET: NDG NAG BMA MAN GUP; 1.70A {Homo sapiens} PDB: 1bhg_A* Length = 613 Back     alignment and structure
>3hn3_A Beta-G1, beta-glucuronidase; lysosomal enzyme, acid hydrolase, glycosidase, disease mutat glycoprotein, hydrolase, lysosome, mucopolysaccharidosis; HET: NDG NAG BMA MAN GUP; 1.70A {Homo sapiens} PDB: 1bhg_A* Length = 613 Back     alignment and structure
>3hn3_A Beta-G1, beta-glucuronidase; lysosomal enzyme, acid hydrolase, glycosidase, disease mutat glycoprotein, hydrolase, lysosome, mucopolysaccharidosis; HET: NDG NAG BMA MAN GUP; 1.70A {Homo sapiens} PDB: 1bhg_A* Length = 613 Back     alignment and structure
>3gm8_A Glycoside hydrolase family 2, candidate beta-GLYC; structural genomics, glycosidase, PSI-2, protein initiative; 2.40A {Bacteroides vulgatus} Length = 801 Back     alignment and structure
>3gm8_A Glycoside hydrolase family 2, candidate beta-GLYC; structural genomics, glycosidase, PSI-2, protein initiative; 2.40A {Bacteroides vulgatus} Length = 801 Back     alignment and structure
>3lpf_A Beta-glucuronidase; alpha/beta barrel, sugar-binding domain, beta-sandwich domai glycosyl hydrolase, glycosida hydrolase; HET: Z77; 2.26A {Escherichia coli} PDB: 3k46_A* 3k4d_A* 3lpg_A* 3k4a_A Length = 605 Back     alignment and structure
>3lpf_A Beta-glucuronidase; alpha/beta barrel, sugar-binding domain, beta-sandwich domai glycosyl hydrolase, glycosida hydrolase; HET: Z77; 2.26A {Escherichia coli} PDB: 3k46_A* 3k4d_A* 3lpg_A* 3k4a_A Length = 605 Back     alignment and structure
>3bga_A Beta-galactosidase; NYSGXRC, protein structure initiative II (PSI-II), glycosyl hydrolase family 2, jelly-roll fold; 2.10A {Bacteroides thetaiotaomicron vpi-5482} PDB: 3dec_A Length = 1010 Back     alignment and structure
>3bga_A Beta-galactosidase; NYSGXRC, protein structure initiative II (PSI-II), glycosyl hydrolase family 2, jelly-roll fold; 2.10A {Bacteroides thetaiotaomicron vpi-5482} PDB: 3dec_A Length = 1010 Back     alignment and structure
>3oba_A Beta-galactosidase; TIM barrel, tetramer, GH2, glycosidase, hydrolase; 2.75A {Kluyveromyces lactis} PDB: 3ob8_A Length = 1032 Back     alignment and structure
>2w61_A GAS2P, glycolipid-anchored surface protein 2; glycoprotein, cell membrane, fungal cell WALL, transglycosyl glucan, membrane, GPI-anchor; 1.62A {Saccharomyces cerevisiae} PDB: 2w62_A* 2w63_A* Length = 555 Back     alignment and structure
>1yq2_A Beta-galactosidase; glycosyl hydrolase family 2, TIM barrel, hexamer; 1.90A {Arthrobacter SP} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 Length = 1024 Back     alignment and structure
>1jz7_A Lactase, beta-galactosidase, LACZ; TIM barrel (alpha/beta barrel), jelly-roll barrel, immunoglobulin, beta supersandwich, hydrolase; HET: GAL; 1.50A {Escherichia coli} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 PDB: 1hn1_A 1jyx_A* 1jz3_A* 1jz4_A* 1jz5_A* 1jz6_A* 1dp0_A* 3iap_A* 1jz8_A* 1jyn_A* 1jyv_A* 1jyw_A* 3iaq_A* 1px3_A 1px4_A* 3czj_A* 3i3e_A 3i3d_A* 3i3b_A 3dym_A ... Length = 1023 Back     alignment and structure
>1jz7_A Lactase, beta-galactosidase, LACZ; TIM barrel (alpha/beta barrel), jelly-roll barrel, immunoglobulin, beta supersandwich, hydrolase; HET: GAL; 1.50A {Escherichia coli} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 PDB: 1hn1_A 1jyx_A* 1jz3_A* 1jz4_A* 1jz5_A* 1jz6_A* 1dp0_A* 3iap_A* 1jz8_A* 1jyn_A* 1jyv_A* 1jyw_A* 3iaq_A* 1px3_A 1px4_A* 3czj_A* 3i3e_A 3i3d_A* 3i3b_A 3dym_A ... Length = 1023 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query669
2je8_A848 Beta-mannosidase; glycoside hydrolase, hydrolase; 100.0
2vzs_A 1032 CSXA, EXO-beta-D-glucosaminidase; hydrolase, GH2, 100.0
3lpf_A605 Beta-glucuronidase; alpha/beta barrel, sugar-bindi 100.0
3hn3_A613 Beta-G1, beta-glucuronidase; lysosomal enzyme, aci 100.0
3fn9_A692 Putative beta-galactosidase; structural genomics, 100.0
3cmg_A667 Putative beta-galactosidase; structural genomics, 100.0
3oba_A 1032 Beta-galactosidase; TIM barrel, tetramer, GH2, gly 100.0
3gm8_A801 Glycoside hydrolase family 2, candidate beta-GLYC; 100.0
1jz7_A 1023 Lactase, beta-galactosidase, LACZ; TIM barrel (alp 100.0
3bga_A 1010 Beta-galactosidase; NYSGXRC, protein structure ini 100.0
1yq2_A 1024 Beta-galactosidase; glycosyl hydrolase family 2, T 100.0
3vup_A351 Beta-1,4-mannanase; TIM barrel, digestive fluid, H 99.87
4awe_A387 Endo-beta-D-1,4-mannanase; hydrolase, endo-mannana 99.82
2w61_A555 GAS2P, glycolipid-anchored surface protein 2; glyc 99.81
2je8_A 848 Beta-mannosidase; glycoside hydrolase, hydrolase; 99.79
1qnr_A344 Endo-1,4-B-D-mannanase; hydrolase, anomalous scatt 99.73
3fn9_A 692 Putative beta-galactosidase; structural genomics, 99.72
2c0h_A353 Mannan endo-1,4-beta-mannosidase; hydrolase, signa 99.71
3cmg_A 667 Putative beta-galactosidase; structural genomics, 99.71
3lpf_A 605 Beta-glucuronidase; alpha/beta barrel, sugar-bindi 99.71
3hn3_A 613 Beta-G1, beta-glucuronidase; lysosomal enzyme, aci 99.68
2vzs_A 1032 CSXA, EXO-beta-D-glucosaminidase; hydrolase, GH2, 99.67
3oba_A 1032 Beta-galactosidase; TIM barrel, tetramer, GH2, gly 99.65
1uuq_A440 Mannosyl-oligosaccharide glucosidase; hydrolase, m 99.64
4hty_A359 Cellulase; (alpha/beta)8 barrel, family 5 endogluc 99.6
3gm8_A 801 Glycoside hydrolase family 2, candidate beta-GLYC; 99.6
1rh9_A373 Endo-beta-mannanase; endo-beta-mannase, retaining, 99.59
1jz7_A 1023 Lactase, beta-galactosidase, LACZ; TIM barrel (alp 99.54
3d3a_A 612 Beta-galactosidase; protein structure initiative I 99.51
3bga_A 1010 Beta-galactosidase; NYSGXRC, protein structure ini 99.51
1yq2_A 1024 Beta-galactosidase; glycosyl hydrolase family 2, T 99.5
1ece_A358 Endocellulase E1; glycosyl hydrolase; HET: BGC; 2. 99.47
3pzg_A383 Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 99.46
3jug_A345 Beta-mannanase; TIM-barrel, glycosidase, hydrolase 99.44
1bqc_A302 Protein (beta-mannanase); glycosyl hydrolase, fami 99.43
3pzt_A327 Endoglucanase; alpha/beta barrel, glycosyl hydrola 99.43
2whl_A294 Beta-mannanase, baman5; glycoside hydrolase, hydro 99.39
1egz_A291 Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CL 99.37
1tvn_A293 Cellulase, endoglucanase G; glycoside hydrolase, C 99.34
7a3h_A303 Endoglucanase; hydrolase, cellulose degradation, g 99.3
3aof_A317 Endoglucanase; glycosyl hydrolase family 5, cellul 99.26
3nco_A320 Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1 99.19
1wky_A464 Endo-beta-1,4-mannanase; TIM barrel, catalytic dom 99.18
2cks_A306 Endoglucanase E-5; carbohydrate metabolism, polysa 99.14
3qho_A458 Endoglucanase, 458AA long hypothetical endo-1,4-be 99.14
3vup_A 351 Beta-1,4-mannanase; TIM barrel, digestive fluid, H 98.98
2osx_A481 Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel 98.95
3u7v_A552 Beta-galactosidase; structural genomics, PSI-biolo 98.91
1kwg_A 645 Beta-galactosidase; TIM barrel, glycoside hydrolas 98.9
1g01_A364 Endoglucanase; alpha/beta barrel, TIM barrel, hydr 98.84
4awe_A 387 Endo-beta-D-1,4-mannanase; hydrolase, endo-mannana 98.84
1tg7_A 971 Beta-galactosidase; TIM barrel domain, glycoside h 98.81
3civ_A343 Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1. 98.81
3thd_A 654 Beta-galactosidase; TIM-barrel domain, glycosyl hy 98.67
1ceo_A343 Cellulase CELC; glycosyl hydrolase, family A/5 of 98.61
3tty_A 675 Beta-GAL, beta-galactosidase; TIM barrel, glycosid 98.59
2w61_A 555 GAS2P, glycolipid-anchored surface protein 2; glyc 98.56
4e8d_A 595 Glycosyl hydrolase, family 35; TIM barrel, beta-pr 98.54
2y8k_A491 Arabinoxylanase, carbohydrate binding family 6; hy 98.49
1h1n_A305 Endo type cellulase ENGI; hydrolase, glycosyl hydr 98.48
1vjz_A341 Endoglucanase; TM1752, structural genomics, JCSG, 98.44
1edg_A380 Endoglucanase A; family A, cellulases, xylanases, 98.44
1qnr_A 344 Endo-1,4-B-D-mannanase; hydrolase, anomalous scatt 98.44
2jep_A395 Xyloglucanase; family 5, plant cell WALL, hydrolas 98.42
3ayr_A376 Endoglucanase; TIM barrel, hydrolase, carbohydrate 98.41
3ndz_A345 Endoglucanase D; cellotriose, xylanase, carbohydra 98.39
3icg_A515 Endoglucanase D; cellulase, xylanase, carbohydrate 98.39
1h4p_A408 Glucan 1,3-beta-glucosidase I/II; hydrolase, gluca 98.37
1uuq_A 440 Mannosyl-oligosaccharide glucosidase; hydrolase, m 98.34
2c0h_A 353 Mannan endo-1,4-beta-mannosidase; hydrolase, signa 98.27
3qr3_A340 Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A 98.25
3n9k_A399 Glucan 1,3-beta-glucosidase; aromatic entranceway/ 98.2
3l55_A353 B-1,4-endoglucanase/cellulase; putative beta-1,4-e 98.17
3og2_A 1003 Beta-galactosidase; TIM barrel domain, glycoside h 98.15
1ur4_A399 Galactanase; hydrolase, beta-1, glycoside hydrolas 97.98
1rh9_A 373 Endo-beta-mannanase; endo-beta-mannase, retaining, 97.91
1hjs_A332 Beta-1,4-galactanase; 4-galactanases, family 53 gl 97.87
1fob_A334 Beta-1,4-galactanase; B/A barrel, glycosyl hydrola 97.85
3pzt_A 327 Endoglucanase; alpha/beta barrel, glycosyl hydrola 97.66
1egz_A291 Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CL 97.52
4h41_A340 Putative alpha-L-fucosidase; hydrolase, carbohydra 97.5
4hty_A 359 Cellulase; (alpha/beta)8 barrel, family 5 endogluc 97.47
7a3h_A 303 Endoglucanase; hydrolase, cellulose degradation, g 97.45
3nco_A 320 Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1 97.32
2cks_A 306 Endoglucanase E-5; carbohydrate metabolism, polysa 97.29
1tvn_A293 Cellulase, endoglucanase G; glycoside hydrolase, C 97.26
1bqc_A 302 Protein (beta-mannanase); glycosyl hydrolase, fami 97.2
3pzg_A 383 Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 97.14
1ece_A 358 Endocellulase E1; glycosyl hydrolase; HET: BGC; 2. 97.02
3cui_A315 EXO-beta-1,4-glucanase; CEX, xylanase, isofagomine 96.92
3aof_A 317 Endoglucanase; glycosyl hydrolase family 5, cellul 96.91
3jug_A 345 Beta-mannanase; TIM-barrel, glycosidase, hydrolase 96.87
2c7f_A513 Alpha-L-arabinofuranosidase; glycosidase, xylan, a 96.85
1kwg_A 645 Beta-galactosidase; TIM barrel, glycoside hydrolas 96.85
1xyz_A347 1,4-beta-D-xylan-xylanohydrolase; glycosyl hydrola 96.83
2whl_A 294 Beta-mannanase, baman5; glycoside hydrolase, hydro 96.75
1qw9_A502 Arabinosidase, alpha-L-arabinofuranosidase; hydrol 96.63
3d3a_A 612 Beta-galactosidase; protein structure initiative I 96.54
1ceo_A 343 Cellulase CELC; glycosyl hydrolase, family A/5 of 96.18
2y2w_A574 Arabinofuranosidase; hydrolase, arabinoxylan, glyc 95.98
4ekj_A500 Beta-xylosidase; TIM-barrel fold, hemicellulase, h 95.96
1w91_A503 Beta-xylosidase; MAD, seMet, tetramer, hydrolase; 95.87
1us2_A530 Xylanase10C, endo-beta-1,4-xylanase; hydrolase, ca 95.86
3qho_A 458 Endoglucanase, 458AA long hypothetical endo-1,4-be 95.65
3gyc_A393 Putative glycoside hydrolase; YP_001304622.1, stru 95.45
1wky_A 464 Endo-beta-1,4-mannanase; TIM barrel, catalytic dom 95.4
1nq6_A302 XYS1; glycoside hydrolase family 10, xylanase, xyl 95.37
1v0l_A313 Endo-1,4-beta-xylanase A; glycoside hydrolase fami 95.37
3ug3_A504 Alpha-L-arabinofuranosidase; TIM barrel, hydrolase 95.28
3civ_A 343 Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1. 95.26
2osx_A 481 Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel 95.11
1vem_A516 Beta-amylase; beta-alpha-barrels, optimum PH, hydr 94.97
3kzs_A463 Glycosyl hydrolase family 5; structural genomics, 94.83
2vrq_A496 Alpha-L-arabinofuranosidase; hydrolase, glycosidas 94.81
1vjz_A 341 Endoglucanase; TM1752, structural genomics, JCSG, 94.8
2y8k_A 491 Arabinoxylanase, carbohydrate binding family 6; hy 94.61
1i1w_A303 Endo-1,4-beta-xylanase; xylan degradation, hydrola 94.26
1ta3_B303 Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), 94.23
1uhv_A500 Beta-xylosidase; family 39 glycoside hydrolase, xy 94.21
1g01_A 364 Endoglucanase; alpha/beta barrel, TIM barrel, hydr 93.94
2d1z_A436 Endo-1,4-beta-D-xylanase; TIM-barrel, retaining en 93.62
1vff_A423 Beta-glucosidase; glycosyl hydrolase, membrane-bou 93.45
1wcg_A464 Thioglucosidase, myrosinase; aphid, beta-glucosida 93.15
1v08_A512 Beta-glucosidase; glycoside hydrolase, dimboa-gluc 92.9
3tty_A 675 Beta-GAL, beta-galactosidase; TIM barrel, glycosid 92.89
3vny_A488 Beta-glucuronidase; TIM barrel, greek-KEY, glycosi 92.84
2uwf_A356 Endoxylanase, alkaline active endoxylanase; hydrol 92.56
1ug6_A431 Beta-glycosidase; glucosidase, atomic resolution, 92.49
2e9l_A469 Cytosolic beta-glucosidase; novel cytosolic neutra 92.33
1qox_A449 Beta-glucosidase; hydrolase, cellulose degradation 92.29
2jep_A 395 Xyloglucanase; family 5, plant cell WALL, hydrolas 92.29
3ahx_A453 Beta-glucosidase A; cellulases, glycosyl hydrolase 92.18
2o9p_A454 Beta-glucosidase B; family 1 glycoside hydrolase; 91.87
2dga_A565 Beta-glucosidase; alpha/beta barrel, hydrolase; 1. 91.85
1r85_A379 Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A 91.84
2e3z_A465 Beta-glucosidase; TIM barrel, glycoside hydrolase 91.78
1v02_A565 Dhurrinase, dhurrinase-1; beta-glucosidase, dhurri 91.64
1cbg_A490 Cyanogenic beta-glucosidase; hydrolase (O-glycosyl 91.55
1w32_A348 Endo-1,4-beta-xylanase A precursor; mutant, calciu 91.42
1e4i_A447 Beta-glucosidase; hydrolase, family 1 glycosyl hyd 91.38
1e4m_M501 Myrosinase MA1; hydrolase, family 1 glycosyl hydro 91.21
1pbg_A468 PGAL, 6-phospho-beta-D-galactosidase; hydrolase (g 91.2
3ndz_A 345 Endoglucanase D; cellotriose, xylanase, carbohydra 90.65
2w5f_A540 Endo-1,4-beta-xylanase Y; cellulosome, glycosidase 90.51
1n82_A331 Xylanase, intra-cellular xylanase; hydrolase; 1.45 90.4
1h1n_A 305 Endo type cellulase ENGI; hydrolase, glycosyl hydr 90.31
2dep_A356 Xylanase B, thermostable celloxylanase; glycosidas 90.05
1edg_A 380 Endoglucanase A; family A, cellulases, xylanases, 90.01
2jf7_A532 Strictosidine-O-beta-D-glucosidase; alkaloid, hydr 89.91
2j78_A468 Beta-glucosidase A; family 1, hydrolase, inhibitor 89.52
3icg_A 515 Endoglucanase D; cellulase, xylanase, carbohydrate 89.42
1gnx_A479 Beta-glucosidase; hydrolase, glycosyltransferase, 89.34
3apg_A473 Beta-glucosidase; TIM barrel, hydrolase, sugar bin 89.3
3fj0_A465 Beta-glucosidase; BGLB,BGL, hydrolase, glycosidase 89.24
1qvb_A481 Beta-glycosidase; TIM-barrel, thermostable, hydrol 89.18
2xhy_A479 BGLA, 6-phospho-beta-glucosidase BGLA; hydrolase, 89.1
1h4p_A 408 Glucan 1,3-beta-glucosidase I/II; hydrolase, gluca 89.03
4hz8_A444 Beta-glucosidase; BGLB,BGL, hydrolase, glycosid ba 88.36
3n9k_A 399 Glucan 1,3-beta-glucosidase; aromatic entranceway/ 88.32
3ta9_A458 Glycoside hydrolase family 1; TIM barrel, glucosid 88.23
3ahy_A473 Beta-glucosidase; cellulases, glycosyl hydrolase, 87.49
3ayr_A 376 Endoglucanase; TIM barrel, hydrolase, carbohydrate 86.49
3cui_A 315 EXO-beta-1,4-glucanase; CEX, xylanase, isofagomine 85.6
1xyz_A 347 1,4-beta-D-xylan-xylanohydrolase; glycosyl hydrola 84.99
3f5l_A481 Beta-glucosidase; beta-alpha-barrels, glycosidase, 83.84
3qr3_A 340 Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A 83.47
3l55_A 353 B-1,4-endoglucanase/cellulase; putative beta-1,4-e 83.18
3gnp_A488 OS03G0212800 protein; beta-alpha barrel, glycosida 82.97
3vii_A487 Beta-glucosidase; cellulases, glycosyl hydrolase, 82.63
4b3l_A479 Beta-glucosidase; hydrolase, glycosidase, carbohyd 81.42
3qom_A481 6-phospho-beta-glucosidase; structural genomics, P 81.3
3ptm_A505 Beta-glucosidase OS4BGlu12; beta-alpha barrel, gly 80.99
4atd_A513 Raucaffricine-O-beta-D-glucosidase; alkaloid, hydr 80.3
>2je8_A Beta-mannosidase; glycoside hydrolase, hydrolase; HET: B3P; 1.7A {Bacteroides thetaiotaomicron} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2vr4_A* 2vl4_A* 2vmf_A* 2vo5_A* 2vot_A* 2vqt_A* 2vjx_A* 2vqu_A* 2wbk_A* Back     alignment and structure
Probab=100.00  E-value=2.1e-69  Score=638.52  Aligned_cols=374  Identities=33%  Similarity=0.610  Sum_probs=315.7

Q ss_pred             EEEEecCCcceEEEEEEecCCCCccccCCCCCCCCCcEEEEEEEEe-CcEEEEEEEEEEEEEEEEeeecCCCccccCCce
Q psy438           64 RDLLVSTKEANMNMLRVWGGGSEVELWWPNGYGEQPLYNLQITLAS-GVEMSTKSIKIGFRTVELIQDHVDPNHLEKGRY  142 (669)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~p~lW~p~g~g~P~LY~l~~~l~~-g~~~d~~~~~~G~R~i~~~~~~~~~~~~~~G~~  142 (669)
                      +.+.+..++..+++.+.+   ++|+||||+|+|+|+||+|+++|.. |+++|+.+.+||||+|+++.+++.     .|+.
T Consensus       251 ~~~~~~~g~~~~~~~~~i---~~p~LW~p~g~g~P~LY~l~v~l~~~g~~~D~~~~~~G~R~i~~~~~~d~-----~G~~  322 (848)
T 2je8_A          251 QQVTLQPGINHITLPAEV---TNPVRWMPNGWGTPTLYDFSAQIACGDRIVAEQSHRIGLRTIRVVNEKDK-----DGES  322 (848)
T ss_dssp             EEEEECSEEEEEEEEEEE---ESCCCBCCTTSSCBCCEEEEEEEEETTEEEEEEEEEECCCCEEEECCEET-----TEEC
T ss_pred             EEEEecCCCcEEEEEEEc---CCCcccCCCCCCCCccEEEEEEEEeCCeEEEEEEeeEEeEEEEEEecCCC-----CCce
Confidence            344555555555666777   7999999999999999999999987 889999999999999999875322     4778


Q ss_pred             EEEEEcCEEeEeccccccCCCCCCCCCCcchhhhhhhhhhhhhhccceeecCCccccccccCCCCcCCcccCCCcchhhh
Q psy438          143 FYFEVNKVPIYSKGSNLIPVDILPERSNNESTIRDLLVSTKEANMNMLRVWGGGVYMSDYFYEPVDILPERSNNESTIRD  222 (669)
Q Consensus       143 ~~~~lNG~~v~~rG~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (669)
                      |+|+|||+||++||+|+||.+.+.++.+.                                                   
T Consensus       323 f~f~lNG~~v~l~G~n~~~~~~~~~~~~~---------------------------------------------------  351 (848)
T 2je8_A          323 FYFEVNGIPMFAKGANYIPQDALLPNVTT---------------------------------------------------  351 (848)
T ss_dssp             CEEEETTEEECEEEEEECCSCSSGGGCCH---------------------------------------------------
T ss_pred             EEEEECCEEeEEEeEeecCchhcccCCCH---------------------------------------------------
Confidence            88999999999999999997776655322                                                   


Q ss_pred             hhhhhhhhhhhhhhhcCCccccccccccccchHHHHHHHHHHHHcCCCEEEccCCCCCCcHHHHHHHHHcCCEEEeeccc
Q psy438          223 LLVSTKEANMNMLRVWGGGVYMTRYTDMARHESTIRDLLVSTKEANMNMLRVWGGGVYMSDYFYETCDELGILIWQDMMF  302 (669)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~l~~~k~~g~N~iR~~~g~~~~~~~~~~~cDe~Gilv~~e~~~  302 (669)
                                                      +.++++|++||++|+|+||+|||+|||+++||++|||+|||||+|+|+
T Consensus       352 --------------------------------~~~~~~l~~~k~~g~N~iR~wgg~~y~~~~~~d~cD~~GilV~~e~~~  399 (848)
T 2je8_A          352 --------------------------------ERYQTLFRDMKEANMNMVRIWGGGTYENNLFYDLADENGILVWQDFMF  399 (848)
T ss_dssp             --------------------------------HHHHHHHHHHHHTTCCEEEECTTSCCCCHHHHHHHHHHTCEEEEECSC
T ss_pred             --------------------------------HHHHHHHHHHHHcCCcEEEeCCCccCCCHHHHHHHHHcCCEEEECccc
Confidence                                            367889999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCChHHHHHHHHHHHHHHHHhCCCcceEeecccCCcchhhhhhhccc-----cChhhHHHHHHHHHHHHHHHHHH
Q psy438          303 ACNNYPATPTFLQSVRSEISQTVRRVQHHPCIAVWAGNNEMEGATIQKWYIR-----ENPELYYKEYAELYVNTLKPIVL  377 (669)
Q Consensus       303 ~~~~~p~~~~~~~~~~~~~~~~v~r~rnHPSi~~W~~~NE~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~v~  377 (669)
                      +|..||.++.|++.+++++++||+|+||||||++|+++||...... .|..+     +..+.+..+|..+|.+.|.+++|
T Consensus       400 ~~~~~~~~~~~~~~~~~~~~~~v~r~~nHPSii~W~~~NE~~~~~~-~w~~~~~~~~~~~~~~~~~y~~~~~~~l~~~vk  478 (848)
T 2je8_A          400 ACTPYPSDPTFLKRVEAEAVYNIRRLRNHASLAMWCGNNEILEALK-YWGFEKKFTPEVYQGLMHGYDKLFRELLPSTVK  478 (848)
T ss_dssp             BSSCCCCCHHHHHHHHHHHHHHHHHHTTCTTEEEEESCBSHHHHHH-HSCTTTTSCHHHHHHHHHHHHHHHTTHHHHHHH
T ss_pred             ccCCCCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEccCCCccccc-ccccccccCccchhhhHHHHHHHHHHHHHHHHH
Confidence            9988899999999999999999999999999999999999965422 34311     11233444565667888999999


Q ss_pred             hhCCCCCEEecCCCCCcccccccccccCCCCCCCCCcccccccccccCCCCCCC--CCccccccccCCCCCcchhcccCC
Q psy438          378 QYDPTRPYLTSSPTNGIESEKAKYALADNPYSNIYGDTHNYDYYQNLWDPSTAP--KSRFCSEFGIQSLPQLSTFQKVAT  455 (669)
Q Consensus       378 ~~DptRp~~~~S~~~~~~~~~~~~~~~~~py~~~~gd~h~y~~~~~~~~~~~~~--~~~f~sE~G~~s~p~~~sl~~~~~  455 (669)
                      ++||+|||+.+||++|..         .+|++...||.|+|+++........|.  +|+|+||||++++|+++|+++++.
T Consensus       479 ~~Dptr~v~~~S~~~g~~---------~~~~~~~~gd~hy~~~w~~~~~~~~y~~~~p~f~sE~G~~s~P~~~tl~~~~~  549 (848)
T 2je8_A          479 EFDSDRFYVHSSPYLANW---------GRPESWGTGDSHNWGVWYGKKPFESLDTDLPRFMSEFGFQSFPEMKTIAAFAA  549 (848)
T ss_dssp             HHCTTSEEESSBSSSCCT---------TCGGGTTBSCEECCTTTTTCCCGGGGGTSCCSSEEECCCCBCCCHHHHHHHCC
T ss_pred             HhCCCCeEEecCCCCCCC---------CCCCCCCCCCccccCcccCCcCHHHhhhcCcceecccCCCcCCCHHHHHhhCC
Confidence            999999999999976621         135666789999998775443333443  699999999999999999999999


Q ss_pred             cccccCCCCcccccccccCCchHHHHHHHhhhcCCCCccHHHHHHHhhHhHHHHHHHHHHHHHhcccccccCCCCCCCCC
Q psy438          456 EADLASWRTPFFDSRQHLAGGTGILESSVGHQFEIGNLTLEYFAYLSQIYQAGAIKTITEQMRRDKGVLREDGSGHNMGA  535 (669)
Q Consensus       456 ~~~~~~~~~~~~~h~~~~~~G~~~~~~~i~~~yg~P~d~ledFvy~SQvmQae~~R~~iE~~Rr~~n~~R~~g~~~~sG~  535 (669)
                      +++| .+.++.+.+|+++..|+..+..++..+|+.|.+ +++|+++||++|++++|.++|+|||.+.        +|+|+
T Consensus       550 ~~~~-~~~s~~~~~h~~~~~g~~~i~~~~~~~~~~p~~-~~df~~~sq~~qa~~~k~~~e~~rr~~~--------~~~G~  619 (848)
T 2je8_A          550 PEDY-QIESEVMNAHQKSSIGNSLIRTYMERDYIIPES-FEDFVYVGLVLQGQGMRHGLEAHRRNRP--------YCMGT  619 (848)
T ss_dssp             GGGC-STTSHHHHHTBCSSSCTHHHHHHHHHHSCCCSS-HHHHHHHHHHHHHHHHHHHHHHHHHTTT--------TCCEE
T ss_pred             Hhhc-CCCCcchhhcccCccchHHHHHHHHHhCCCCCC-HHHHHHHHHHHHHHHHHHHHHHHHccCC--------CCcEE
Confidence            9898 567777888888888888888899999999986 9999999999999999999999999763        48999


Q ss_pred             eeEeeccccCccc
Q psy438          536 LYWQLNDTCDELG  548 (669)
Q Consensus       536 LyWq~nd~~D~~G  548 (669)
                      ++|||||+|+..+
T Consensus       620 l~WqlnD~Wp~~s  632 (848)
T 2je8_A          620 LYWQLNDSWPVVS  632 (848)
T ss_dssp             EESCSCCSSSCBB
T ss_pred             EEEeccCCcccce
Confidence            9999999999843
>2vzs_A CSXA, EXO-beta-D-glucosaminidase; hydrolase, GH2, glucosamine, glycoside hydrolase; HET: GCS; 1.85A {Amycolatopsis orientalis} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2x05_A* 2x09_A* 2vzo_A 2vzt_A* 2vzv_A* 2vzu_A* Back     alignment and structure
>3lpf_A Beta-glucuronidase; alpha/beta barrel, sugar-binding domain, beta-sandwich domai glycosyl hydrolase, glycosida hydrolase; HET: Z77; 2.26A {Escherichia coli} PDB: 3k46_A* 3k4d_A* 3lpg_A* 3k4a_A Back     alignment and structure
>3hn3_A Beta-G1, beta-glucuronidase; lysosomal enzyme, acid hydrolase, glycosidase, disease mutat glycoprotein, hydrolase, lysosome, mucopolysaccharidosis; HET: NDG NAG BMA MAN GUP; 1.70A {Homo sapiens} PDB: 1bhg_A* Back     alignment and structure
>3fn9_A Putative beta-galactosidase; structural genomics, glycosidas hydrolase, PSI-2, protein structure initiative; 2.70A {Bacteroides fragilis} Back     alignment and structure
>3cmg_A Putative beta-galactosidase; structural genomics, PSI-2, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides fragilis} Back     alignment and structure
>3oba_A Beta-galactosidase; TIM barrel, tetramer, GH2, glycosidase, hydrolase; 2.75A {Kluyveromyces lactis} PDB: 3ob8_A Back     alignment and structure
>3gm8_A Glycoside hydrolase family 2, candidate beta-GLYC; structural genomics, glycosidase, PSI-2, protein initiative; 2.40A {Bacteroides vulgatus} Back     alignment and structure
>1jz7_A Lactase, beta-galactosidase, LACZ; TIM barrel (alpha/beta barrel), jelly-roll barrel, immunoglobulin, beta supersandwich, hydrolase; HET: GAL; 1.50A {Escherichia coli} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 PDB: 1hn1_A 1jyx_A* 1jz3_A* 1jz4_A* 1jz5_A* 1jz6_A* 1dp0_A* 3iap_A* 1jz8_A* 1jyn_A* 1jyv_A* 1jyw_A* 3iaq_A* 1px3_A 1px4_A* 3czj_A* 3i3e_A 3i3d_A* 3i3b_A 3dym_A ... Back     alignment and structure
>3bga_A Beta-galactosidase; NYSGXRC, protein structure initiative II (PSI-II), glycosyl hydrolase family 2, jelly-roll fold; 2.10A {Bacteroides thetaiotaomicron vpi-5482} PDB: 3dec_A Back     alignment and structure
>1yq2_A Beta-galactosidase; glycosyl hydrolase family 2, TIM barrel, hexamer; 1.90A {Arthrobacter SP} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 Back     alignment and structure
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai} Back     alignment and structure
>4awe_A Endo-beta-D-1,4-mannanase; hydrolase, endo-mannanase, glycosyl hydrolase, GH5; HET: NAG; 1.40A {Neurospora sitophila} Back     alignment and structure
>2w61_A GAS2P, glycolipid-anchored surface protein 2; glycoprotein, cell membrane, fungal cell WALL, transglycosyl glucan, membrane, GPI-anchor; 1.62A {Saccharomyces cerevisiae} PDB: 2w62_A* 2w63_A* Back     alignment and structure
>2je8_A Beta-mannosidase; glycoside hydrolase, hydrolase; HET: B3P; 1.7A {Bacteroides thetaiotaomicron} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2vr4_A* 2vl4_A* 2vmf_A* 2vo5_A* 2vot_A* 2vqt_A* 2vjx_A* 2vqu_A* 2wbk_A* Back     alignment and structure
>1qnr_A Endo-1,4-B-D-mannanase; hydrolase, anomalous scattering; HET: NAG MAB; 1.4A {Trichoderma reesei} SCOP: c.1.8.3 PDB: 1qno_A* 1qnq_A* 1qnp_A* 1qns_A* Back     alignment and structure
>3fn9_A Putative beta-galactosidase; structural genomics, glycosidas hydrolase, PSI-2, protein structure initiative; 2.70A {Bacteroides fragilis} Back     alignment and structure
>2c0h_A Mannan endo-1,4-beta-mannosidase; hydrolase, signal, TIM alpha/beta barrel; 1.6A {Mytilus edulis} SCOP: c.1.8.3 Back     alignment and structure
>3cmg_A Putative beta-galactosidase; structural genomics, PSI-2, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides fragilis} Back     alignment and structure
>3lpf_A Beta-glucuronidase; alpha/beta barrel, sugar-binding domain, beta-sandwich domai glycosyl hydrolase, glycosida hydrolase; HET: Z77; 2.26A {Escherichia coli} PDB: 3k46_A* 3k4d_A* 3lpg_A* 3k4a_A Back     alignment and structure
>3hn3_A Beta-G1, beta-glucuronidase; lysosomal enzyme, acid hydrolase, glycosidase, disease mutat glycoprotein, hydrolase, lysosome, mucopolysaccharidosis; HET: NDG NAG BMA MAN GUP; 1.70A {Homo sapiens} PDB: 1bhg_A* Back     alignment and structure
>2vzs_A CSXA, EXO-beta-D-glucosaminidase; hydrolase, GH2, glucosamine, glycoside hydrolase; HET: GCS; 1.85A {Amycolatopsis orientalis} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2x05_A* 2x09_A* 2vzo_A 2vzt_A* 2vzv_A* 2vzu_A* Back     alignment and structure
>3oba_A Beta-galactosidase; TIM barrel, tetramer, GH2, glycosidase, hydrolase; 2.75A {Kluyveromyces lactis} PDB: 3ob8_A Back     alignment and structure
>1uuq_A Mannosyl-oligosaccharide glucosidase; hydrolase, mannosidase, mannan, glycoside hydrolase, family 5; 1.5A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uz4_A* Back     alignment and structure
>4hty_A Cellulase; (alpha/beta)8 barrel, family 5 endoglucanase, hydrolase; 2.00A {Uncultured bacterium} PDB: 4hu0_A* Back     alignment and structure
>3gm8_A Glycoside hydrolase family 2, candidate beta-GLYC; structural genomics, glycosidase, PSI-2, protein initiative; 2.40A {Bacteroides vulgatus} Back     alignment and structure
>1rh9_A Endo-beta-mannanase; endo-beta-mannase, retaining, glycoside hydrolase family 5; 1.50A {Solanum lycopersicum} SCOP: c.1.8.3 Back     alignment and structure
>1jz7_A Lactase, beta-galactosidase, LACZ; TIM barrel (alpha/beta barrel), jelly-roll barrel, immunoglobulin, beta supersandwich, hydrolase; HET: GAL; 1.50A {Escherichia coli} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 PDB: 1hn1_A 1jyx_A* 1jz3_A* 1jz4_A* 1jz5_A* 1jz6_A* 1dp0_A* 3iap_A* 1jz8_A* 1jyn_A* 1jyv_A* 1jyw_A* 3iaq_A* 1px3_A 1px4_A* 3czj_A* 3i3e_A 3i3d_A* 3i3b_A 3dym_A ... Back     alignment and structure
>3d3a_A Beta-galactosidase; protein structure initiative II, PSI II, NYSGXRC, 11092F, structural genomics; 2.15A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>3bga_A Beta-galactosidase; NYSGXRC, protein structure initiative II (PSI-II), glycosyl hydrolase family 2, jelly-roll fold; 2.10A {Bacteroides thetaiotaomicron vpi-5482} PDB: 3dec_A Back     alignment and structure
>1yq2_A Beta-galactosidase; glycosyl hydrolase family 2, TIM barrel, hexamer; 1.90A {Arthrobacter SP} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 Back     alignment and structure
>1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A Back     alignment and structure
>3pzg_A Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 5; alpha/beta barrel, glycosyl hydrolase, sugar binding, secret hydrolase; 1.40A {Thermotoga petrophila} PDB: 3pz9_A 3pzi_A* 3pzm_A 3pzn_A* 3pzo_A* 3pzq_A* Back     alignment and structure
>3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus} Back     alignment and structure
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A* Back     alignment and structure
>3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A Back     alignment and structure
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A Back     alignment and structure
>1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family 5-2, cellulase; 2.30A {Erwinia chrysanthemi} SCOP: c.1.8.3 Back     alignment and structure
>1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family 5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3 PDB: 1tvp_A* Back     alignment and structure
>7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A Back     alignment and structure
>3aof_A Endoglucanase; glycosyl hydrolase family 5, cellulase, biofuel, hyperthermo hydrolase; HET: BMA; 1.29A {Thermotoga maritima} PDB: 3amg_A* 3amc_A 3amd_A 3mmu_A 3mmw_A 3azs_A* 3azr_A* 3azt_A* Back     alignment and structure
>3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A* Back     alignment and structure
>1wky_A Endo-beta-1,4-mannanase; TIM barrel, catalytic domain, CBM, hydrolase; 1.65A {Bacillus SP} SCOP: b.18.1.31 c.1.8.3 Back     alignment and structure
>2cks_A Endoglucanase E-5; carbohydrate metabolism, polysaccharide degradation, glycoside hydrolase family 5, hydrolase, glycosidase; HET: BEN; 1.6A {Thermobifida fusca} PDB: 2ckr_A* Back     alignment and structure
>3qho_A Endoglucanase, 458AA long hypothetical endo-1,4-beta-glucanase; cellulase, catalytic domain, hydrolase; HET: CTT; 1.65A {Pyrococcus horikoshii} PDB: 3axx_A* 2zum_A 2zun_A* 3qhm_A* 3qhn_A* Back     alignment and structure
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai} Back     alignment and structure
>2osx_A Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel, hydrolase; HET: SIA GAL BGC 16C; 1.10A {Rhodococcus SP} PDB: 2oyk_A* 2osw_A* 2oyl_A* 2oym_A* 2osy_A* Back     alignment and structure
>3u7v_A Beta-galactosidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel, glyco_hydro_42; HET: MSE; 1.80A {Caulobacter crescentus} Back     alignment and structure
>1kwg_A Beta-galactosidase; TIM barrel, glycoside hydrolase family 42, trimer, hydrolase; 1.60A {Thermus thermophilus} SCOP: b.71.1.1 c.1.8.1 c.23.16.5 PDB: 1kwk_A* Back     alignment and structure
>1g01_A Endoglucanase; alpha/beta barrel, TIM barrel, hydrolase; 1.90A {Bacillus SP} SCOP: c.1.8.3 PDB: 1g0c_A* Back     alignment and structure
>4awe_A Endo-beta-D-1,4-mannanase; hydrolase, endo-mannanase, glycosyl hydrolase, GH5; HET: NAG; 1.40A {Neurospora sitophila} Back     alignment and structure
>1tg7_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family GH35, glycopr penicillium, hydrolase; HET: NAG BMA MAN; 1.90A {Penicillium SP} SCOP: b.149.1.1 b.18.1.27 b.18.1.27 b.71.1.5 c.1.8.14 PDB: 1xc6_A* Back     alignment and structure
>3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A {Alicyclobacillus acidocaldarius} Back     alignment and structure
>3thd_A Beta-galactosidase; TIM-barrel domain, glycosyl hydrolase, glycosylation, hydrolase; HET: NAG DGJ; 1.79A {Homo sapiens} PDB: 3thc_A* Back     alignment and structure
>1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A Back     alignment and structure
>3tty_A Beta-GAL, beta-galactosidase; TIM barrel, glycoside hydrolase, hydrolase; HET: GLA; 2.25A {Bacillus circulans subsp} PDB: 3tts_A* Back     alignment and structure
>2w61_A GAS2P, glycolipid-anchored surface protein 2; glycoprotein, cell membrane, fungal cell WALL, transglycosyl glucan, membrane, GPI-anchor; 1.62A {Saccharomyces cerevisiae} PDB: 2w62_A* 2w63_A* Back     alignment and structure
>4e8d_A Glycosyl hydrolase, family 35; TIM barrel, beta-propeller, glycohydrolase; 1.80A {Streptococcus pneumoniae} PDB: 4e8c_A Back     alignment and structure
>2y8k_A Arabinoxylanase, carbohydrate binding family 6; hydrolase; 1.47A {Clostridium thermocellum} Back     alignment and structure
>1h1n_A Endo type cellulase ENGI; hydrolase, glycosyl hydrolase, family 5, subtype, thermophilic, thermophIle, endoglucanase; 1.12A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1gzj_A Back     alignment and structure
>1vjz_A Endoglucanase; TM1752, structural genomics, JCSG, PSI, prote structure initiative, joint center for structural genomics; 2.05A {Thermotoga maritima} SCOP: c.1.8.3 Back     alignment and structure
>1edg_A Endoglucanase A; family A, cellulases, xylanases, family 5 of glycosyl hydrol cellulose degradation; 1.60A {Clostridium cellulolyticum} SCOP: c.1.8.3 Back     alignment and structure
>1qnr_A Endo-1,4-B-D-mannanase; hydrolase, anomalous scattering; HET: NAG MAB; 1.4A {Trichoderma reesei} SCOP: c.1.8.3 PDB: 1qno_A* 1qnq_A* 1qnp_A* 1qns_A* Back     alignment and structure
>2jep_A Xyloglucanase; family 5, plant cell WALL, hydrolase; 1.4A {Paenibacillus pabuli} PDB: 2jeq_A* Back     alignment and structure
>3ayr_A Endoglucanase; TIM barrel, hydrolase, carbohydrate/sugar binding; 2.00A {Piromyces rhizinflatus} PDB: 3ays_A* Back     alignment and structure
>3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_A* Back     alignment and structure
>1h4p_A Glucan 1,3-beta-glucosidase I/II; hydrolase, glucan degradation, hydrolyase, glycosidase; HET: NAG BMA MAN NDG; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.8.3 Back     alignment and structure
>1uuq_A Mannosyl-oligosaccharide glucosidase; hydrolase, mannosidase, mannan, glycoside hydrolase, family 5; 1.5A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uz4_A* Back     alignment and structure
>2c0h_A Mannan endo-1,4-beta-mannosidase; hydrolase, signal, TIM alpha/beta barrel; 1.6A {Mytilus edulis} SCOP: c.1.8.3 Back     alignment and structure
>3qr3_A Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A {Hypocrea jecorina} Back     alignment and structure
>3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} SCOP: c.1.8.3 PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A Back     alignment and structure
>3og2_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family 35, glycoprot hydrolase; HET: NAG BMA MAN GLC; 1.20A {Trichoderma reesei} PDB: 3ogr_A* 3ogs_A* 3ogv_A* Back     alignment and structure
>1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A* Back     alignment and structure
>1rh9_A Endo-beta-mannanase; endo-beta-mannase, retaining, glycoside hydrolase family 5; 1.50A {Solanum lycopersicum} SCOP: c.1.8.3 Back     alignment and structure
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A* Back     alignment and structure
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A Back     alignment and structure
>3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A Back     alignment and structure
>1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family 5-2, cellulase; 2.30A {Erwinia chrysanthemi} SCOP: c.1.8.3 Back     alignment and structure
>4h41_A Putative alpha-L-fucosidase; hydrolase, carbohydrate metabolism, HOST glycans, structural genomics; HET: MSE 1PE PE4 PG4 PG6; 1.80A {Bacteroides thetaiotaomicron} Back     alignment and structure
>4hty_A Cellulase; (alpha/beta)8 barrel, family 5 endoglucanase, hydrolase; 2.00A {Uncultured bacterium} PDB: 4hu0_A* Back     alignment and structure
>7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A Back     alignment and structure
>3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A* Back     alignment and structure
>2cks_A Endoglucanase E-5; carbohydrate metabolism, polysaccharide degradation, glycoside hydrolase family 5, hydrolase, glycosidase; HET: BEN; 1.6A {Thermobifida fusca} PDB: 2ckr_A* Back     alignment and structure
>1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family 5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3 PDB: 1tvp_A* Back     alignment and structure
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A* Back     alignment and structure
>3pzg_A Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 5; alpha/beta barrel, glycosyl hydrolase, sugar binding, secret hydrolase; 1.40A {Thermotoga petrophila} PDB: 3pz9_A 3pzi_A* 3pzm_A 3pzn_A* 3pzo_A* 3pzq_A* Back     alignment and structure
>1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A Back     alignment and structure
>3cui_A EXO-beta-1,4-glucanase; CEX, xylanase, isofagomine inhibitor, TIM barrel, cellulose degradation, glycosidase, hydrolase; HET: X4S; 1.50A {Cellulomonas fimi} PDB: 3cug_A* 3cuh_A* 3cuf_A* 3cuj_A* 1fh9_A* 1fh7_A 1fh8_A 1exp_A* 1fhd_A* 1j01_A* 2exo_A 2xyl_A 2his_A* Back     alignment and structure
>3aof_A Endoglucanase; glycosyl hydrolase family 5, cellulase, biofuel, hyperthermo hydrolase; HET: BMA; 1.29A {Thermotoga maritima} PDB: 3amg_A* 3amc_A 3amd_A 3mmu_A 3mmw_A 3azs_A* 3azr_A* 3azt_A* Back     alignment and structure
>3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus} Back     alignment and structure
>2c7f_A Alpha-L-arabinofuranosidase; glycosidase, xylan, arabinan, hydrolase; HET: AHR; 2.7A {Clostridium thermocellum} SCOP: b.71.1.2 c.1.8.3 PDB: 2c8n_A Back     alignment and structure
>1kwg_A Beta-galactosidase; TIM barrel, glycoside hydrolase family 42, trimer, hydrolase; 1.60A {Thermus thermophilus} SCOP: b.71.1.1 c.1.8.1 c.23.16.5 PDB: 1kwk_A* Back     alignment and structure
>1xyz_A 1,4-beta-D-xylan-xylanohydrolase; glycosyl hydrolase, xylanase, family F/10 of glycosyl hydrolases, glycosyltransferase; 1.40A {Clostridium thermocellum} SCOP: c.1.8.3 Back     alignment and structure
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A Back     alignment and structure
>1qw9_A Arabinosidase, alpha-L-arabinofuranosidase; hydrolase; HET: KHP; 1.20A {Geobacillus stearothermophilus} SCOP: b.71.1.2 c.1.8.3 PDB: 1pz2_A* 1qw8_A* 1pz3_A Back     alignment and structure
>3d3a_A Beta-galactosidase; protein structure initiative II, PSI II, NYSGXRC, 11092F, structural genomics; 2.15A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A Back     alignment and structure
>2y2w_A Arabinofuranosidase; hydrolase, arabinoxylan, glycoside hydrolase family 51; 2.50A {Bifidobacterium longum} Back     alignment and structure
>4ekj_A Beta-xylosidase; TIM-barrel fold, hemicellulase, hydrolase; 2.50A {Caulobacter vibrioides} Back     alignment and structure
>1w91_A Beta-xylosidase; MAD, seMet, tetramer, hydrolase; 2.2A {Geobacillus stearothermophilus} SCOP: b.71.1.2 c.1.8.3 PDB: 2bs9_A 2bfg_A* Back     alignment and structure
>1us2_A Xylanase10C, endo-beta-1,4-xylanase; hydrolase, carbohydrate binding module, xylan degradation; HET: XYP; 1.85A {Cellvibrio japonicus} SCOP: b.18.1.11 c.1.8.3 PDB: 1us3_A Back     alignment and structure
>3qho_A Endoglucanase, 458AA long hypothetical endo-1,4-beta-glucanase; cellulase, catalytic domain, hydrolase; HET: CTT; 1.65A {Pyrococcus horikoshii} PDB: 3axx_A* 2zum_A 2zun_A* 3qhm_A* 3qhn_A* Back     alignment and structure
>3gyc_A Putative glycoside hydrolase; YP_001304622.1, structural GEN joint center for structural genomics, JCSG; HET: MSE; 1.85A {Parabacteroides distasonis atcc 8503} Back     alignment and structure
>1wky_A Endo-beta-1,4-mannanase; TIM barrel, catalytic domain, CBM, hydrolase; 1.65A {Bacillus SP} SCOP: b.18.1.31 c.1.8.3 Back     alignment and structure
>1nq6_A XYS1; glycoside hydrolase family 10, xylanase, xylan degradation,, hydrolase; 1.78A {Streptomyces halstedii} SCOP: c.1.8.3 Back     alignment and structure
>1v0l_A Endo-1,4-beta-xylanase A; glycoside hydrolase family 10, xylan degradation, isofagomine, hydrolase; 0.98A {Streptomyces lividans} SCOP: c.1.8.3 PDB: 1e0x_A 1e0w_A* 1od8_A 1v0k_A 1v0m_A 1v0n_A 1e0v_A* 1xas_A 2g3i_A 2g3j_A* 2g4f_A 1v6y_A Back     alignment and structure
>3ug3_A Alpha-L-arabinofuranosidase; TIM barrel, hydrolase; 1.80A {Thermotoga maritima} PDB: 3ug4_A* 3ug5_A* 3s2c_A 4atw_A Back     alignment and structure
>3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A {Alicyclobacillus acidocaldarius} Back     alignment and structure
>2osx_A Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel, hydrolase; HET: SIA GAL BGC 16C; 1.10A {Rhodococcus SP} PDB: 2oyk_A* 2osw_A* 2oyl_A* 2oym_A* 2osy_A* Back     alignment and structure
>1vem_A Beta-amylase; beta-alpha-barrels, optimum PH, hydrolase; HET: GLC; 1.85A {Bacillus cereus} SCOP: b.3.1.1 c.1.8.1 PDB: 1b90_A* 1j0y_A* 1j0z_A* 1j10_A* 1b9z_A* 1j12_A* 1j18_A* 1j11_A* 5bca_A 1veo_A* 1itc_A* 1ven_A* 1vep_A* 1cqy_A Back     alignment and structure
>3kzs_A Glycosyl hydrolase family 5; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 2.10A {Bacteroides thetaiotaomicron} Back     alignment and structure
>2vrq_A Alpha-L-arabinofuranosidase; hydrolase, glycosidase; HET: XYP; 2.00A {Thermobacillus xylanilyticus} PDB: 2vrk_A Back     alignment and structure
>1vjz_A Endoglucanase; TM1752, structural genomics, JCSG, PSI, prote structure initiative, joint center for structural genomics; 2.05A {Thermotoga maritima} SCOP: c.1.8.3 Back     alignment and structure
>2y8k_A Arabinoxylanase, carbohydrate binding family 6; hydrolase; 1.47A {Clostridium thermocellum} Back     alignment and structure
>1i1w_A Endo-1,4-beta-xylanase; xylan degradation, hydrolase, glycosidase, enzyme, ultra HIG resolution, cryo temperature, 1; HET: PCA; 0.89A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1i1x_A* 2bnj_A* 1gok_A 1gom_A 1goo_A 1goq_A* 1gor_A* 1k6a_A 3o2l_A 3nyd_A* 1tux_A 1b31_A 1b30_A 1b3v_A* 1b3w_A* 1b3x_A* 1b3y_A* 1b3z_A* 1bg4_A Back     alignment and structure
>1ta3_B Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), beta alpha barrel (xylanase), HYD inhibitor-hydrolase complex; HET: NAG; 1.70A {Emericella nidulans} SCOP: c.1.8.3 Back     alignment and structure
>1uhv_A Beta-xylosidase; family 39 glycoside hydrolase, xylan, xylose, covalent glycosyl-enzyme intermediate; 2.10A {Thermoanaerobacterium saccharolyticum} SCOP: b.71.1.2 c.1.8.3 PDB: 1px8_A Back     alignment and structure
>1g01_A Endoglucanase; alpha/beta barrel, TIM barrel, hydrolase; 1.90A {Bacillus SP} SCOP: c.1.8.3 PDB: 1g0c_A* Back     alignment and structure
>2d1z_A Endo-1,4-beta-D-xylanase; TIM-barrel, retaining enzyme, catalytic-site mutant, chemica hydrolase; 1.60A {Streptomyces olivaceoviridis} PDB: 2d20_A* 2d22_A 2d23_A 2d24_A* 1xyf_A 1isw_A* 1isx_A* 1isy_A* 1isv_A* 1it0_A* 1v6u_A* 1v6v_A* 1v6w_A* 1v6x_A* 1isz_A Back     alignment and structure
>1vff_A Beta-glucosidase; glycosyl hydrolase, membrane-bound enzyme, thermostability, TIM barrel, alkylglucosides; 2.50A {Pyrococcus horikoshii} SCOP: c.1.8.4 Back     alignment and structure
>1wcg_A Thioglucosidase, myrosinase; aphid, beta-glucosidase, insect, beta-barrel, hydrolase, glycosidase; 1.10A {Brevicoryne brassicae} SCOP: c.1.8.4 Back     alignment and structure
>1v08_A Beta-glucosidase; glycoside hydrolase, dimboa-glucoside, inhibitor, PEST defense, family GH1, hydrolase, chloroplast, transit peptide, 3D-structure; HET: NTZ; 1.9A {Zea mays} SCOP: c.1.8.4 PDB: 1e4l_A* 1e4n_A* 1e56_A* 1e55_A* 1e1e_A 1e1f_A* 1h49_A* 1hxj_A Back     alignment and structure
>3tty_A Beta-GAL, beta-galactosidase; TIM barrel, glycoside hydrolase, hydrolase; HET: GLA; 2.25A {Bacillus circulans subsp} PDB: 3tts_A* Back     alignment and structure
>3vny_A Beta-glucuronidase; TIM barrel, greek-KEY, glycoside hydrolase family 79, hydrol; 1.50A {Acidobacterium capsulatum} PDB: 3vnz_A* 3vo0_A* Back     alignment and structure
>2uwf_A Endoxylanase, alkaline active endoxylanase; hydrolase, xylan degradation, xylanase structure, glycosidase, alkaliphilic; 2.10A {Bacillus halodurans} PDB: 2f8q_A 2fgl_A* Back     alignment and structure
>1ug6_A Beta-glycosidase; glucosidase, atomic resolution, riken structural genomics/PR initiative, RSGI, structural genomics, hydrolase; 0.99A {Thermus thermophilus} SCOP: c.1.8.4 PDB: 1np2_A Back     alignment and structure
>2e9l_A Cytosolic beta-glucosidase; novel cytosolic neutral beta-glycosylceramidase, hydrolase; HET: BGC PLM OLA; 1.60A {Homo sapiens} PDB: 2e9m_A* 2zox_A* 2jfe_X* Back     alignment and structure
>1qox_A Beta-glucosidase; hydrolase, cellulose degradation; 2.7A {Bacillus circulans} SCOP: c.1.8.4 Back     alignment and structure
>2jep_A Xyloglucanase; family 5, plant cell WALL, hydrolase; 1.4A {Paenibacillus pabuli} PDB: 2jeq_A* Back     alignment and structure
>3ahx_A Beta-glucosidase A; cellulases, glycosyl hydrolase, manganese enhancement, hydro; HET: 7PE; 1.90A {Clostridium cellulovorans} Back     alignment and structure
>2o9p_A Beta-glucosidase B; family 1 glycoside hydrolase; 2.10A {Paenibacillus polymyxa} PDB: 2o9t_A* 2z1s_A* 2jie_A* 2o9r_A* Back     alignment and structure
>2dga_A Beta-glucosidase; alpha/beta barrel, hydrolase; 1.80A {Triticum aestivum} PDB: 3aiq_A* 3air_A* 3ais_A* 3aiu_A 3aiv_A* 3aiw_A* Back     alignment and structure
>1r85_A Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 1hiz_A* 1r87_A* 3mmd_A* 1r86_A Back     alignment and structure
>2e3z_A Beta-glucosidase; TIM barrel, glycoside hydrolase family 1, CLAN GH-A, structural genomics, NPPSFA; 1.50A {Phanerochaete chrysosporium} PDB: 2e40_A* Back     alignment and structure
>1v02_A Dhurrinase, dhurrinase-1; beta-glucosidase, dhurrin hydrolysis, PEST defense, family GH1, hydrolase; 1.9A {Sorghum bicolor} SCOP: c.1.8.4 PDB: 1v02_E 1v03_A* Back     alignment and structure
>1cbg_A Cyanogenic beta-glucosidase; hydrolase (O-glycosyl); 2.15A {Trifolium repens} SCOP: c.1.8.4 Back     alignment and structure
>1w32_A Endo-1,4-beta-xylanase A precursor; mutant, calcium ION, thermostable, glycosyle hydrolase, family 10, error prone PCR, hydrolase; 1.2A {Cellvibrio japonicus} SCOP: c.1.8.3 PDB: 1w2p_A 1w2v_A 1w3h_A 1clx_A 1e5n_A* 1xys_A Back     alignment and structure
>1e4i_A Beta-glucosidase; hydrolase, family 1 glycosyl hydrolase, covalent enzyme-GLYC intermediate, alpha/beta barrel; HET: G2F NFG; 2.00A {Bacillus polymyxa} SCOP: c.1.8.4 PDB: 1tr1_A 1bgg_A* 1bga_A 1uyq_A* Back     alignment and structure
>1e4m_M Myrosinase MA1; hydrolase, family 1 glycosyl hydrolase, glucosinolate, TIM B; HET: NAG FUC BMA MAN; 1.2A {Sinapis alba} SCOP: c.1.8.4 PDB: 1e6q_M* 1e6s_M* 1e6x_M* 1e70_M* 1e71_M* 1e72_M* 1e73_M* 1w9b_M* 1w9d_M* 2wxd_M* 1dwa_M* 1dwf_M* 1dwg_M* 1dwh_M* 1dwi_M* 1dwj_M* 1myr_A* Back     alignment and structure
>1pbg_A PGAL, 6-phospho-beta-D-galactosidase; hydrolase (glycosyl hydrolase); 2.30A {Lactococcus lactis} SCOP: c.1.8.4 PDB: 3pbg_A 2pbg_A 4pbg_A* Back     alignment and structure
>3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_A* Back     alignment and structure
>2w5f_A Endo-1,4-beta-xylanase Y; cellulosome, glycosidase, xylan degradation, hydrolase; HET: XYP; 1.90A {Clostridium thermocellum} PDB: 2wze_A* 2wys_A* Back     alignment and structure
>1n82_A Xylanase, intra-cellular xylanase; hydrolase; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 3mua_A* 2q8x_A* 3msd_A* 3msg_A* 3mui_A* 3ms8_A Back     alignment and structure
>1h1n_A Endo type cellulase ENGI; hydrolase, glycosyl hydrolase, family 5, subtype, thermophilic, thermophIle, endoglucanase; 1.12A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1gzj_A Back     alignment and structure
>2dep_A Xylanase B, thermostable celloxylanase; glycosidase, xylan degradation, family 10, structural genomics, NPPSFA; 1.80A {Clostridium stercorarium} Back     alignment and structure
>1edg_A Endoglucanase A; family A, cellulases, xylanases, family 5 of glycosyl hydrol cellulose degradation; 1.60A {Clostridium cellulolyticum} SCOP: c.1.8.3 Back     alignment and structure
>2jf7_A Strictosidine-O-beta-D-glucosidase; alkaloid, hydrolase; 2.48A {Rauvolfia serpentina} PDB: 2jf6_A Back     alignment and structure
>2j78_A Beta-glucosidase A; family 1, hydrolase, inhibitor, glycosidase, polysaccharide degradation, transition state mimic, carbohydrate metabolism; HET: GOX; 1.65A {Thermotoga maritima} SCOP: c.1.8.4 PDB: 1oif_A* 1oim_A* 1oin_A* 1od0_A* 1w3j_A* 1uz1_A* 2cbv_A* 2ces_A* 2cet_A* 2j75_A* 2j77_A* 2cbu_A* 2j79_A* 2j7b_A* 2j7c_A* 2j7d_A* 2j7e_A* 2j7f_A* 2j7g_A* 2j7h_A* ... Back     alignment and structure
>1gnx_A Beta-glucosidase; hydrolase, glycosyltransferase, family 1 of glycosyl hydrolase; HET: SUC; 1.68A {Streptomyces SP} SCOP: c.1.8.4 PDB: 1gon_A Back     alignment and structure
>3apg_A Beta-glucosidase; TIM barrel, hydrolase, sugar binding, hydrolysis; 2.35A {Pyrococcus furiosus} Back     alignment and structure
>1qvb_A Beta-glycosidase; TIM-barrel, thermostable, hydrolase; 2.40A {Thermosphaera aggregans} SCOP: c.1.8.4 Back     alignment and structure
>2xhy_A BGLA, 6-phospho-beta-glucosidase BGLA; hydrolase, glycosidase; 2.30A {Escherichia coli} Back     alignment and structure
>1h4p_A Glucan 1,3-beta-glucosidase I/II; hydrolase, glucan degradation, hydrolyase, glycosidase; HET: NAG BMA MAN NDG; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.8.3 Back     alignment and structure
>4hz8_A Beta-glucosidase; BGLB,BGL, hydrolase, glycosid barrel, carbohydrate/sugar binding; HET: BGC; 1.14A {Uncultured bacterium} PDB: 4hz7_A* 4hz6_A* 3fj0_A* 3cmj_A 3fiz_A* 3fiy_A* Back     alignment and structure
>3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} SCOP: c.1.8.3 PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A Back     alignment and structure
>3ta9_A Glycoside hydrolase family 1; TIM barrel, glucosidase; 3.00A {Halothermothrix orenii} Back     alignment and structure
>3ahy_A Beta-glucosidase; cellulases, glycosyl hydrolase, manganese enhancement, hydro; 1.63A {Trichoderma reesei} Back     alignment and structure
>3ayr_A Endoglucanase; TIM barrel, hydrolase, carbohydrate/sugar binding; 2.00A {Piromyces rhizinflatus} PDB: 3ays_A* Back     alignment and structure
>3cui_A EXO-beta-1,4-glucanase; CEX, xylanase, isofagomine inhibitor, TIM barrel, cellulose degradation, glycosidase, hydrolase; HET: X4S; 1.50A {Cellulomonas fimi} PDB: 3cug_A* 3cuh_A* 3cuf_A* 3cuj_A* 1fh9_A* 1fh7_A 1fh8_A 1exp_A* 1fhd_A* 1j01_A* 2exo_A 2xyl_A 2his_A* Back     alignment and structure
>1xyz_A 1,4-beta-D-xylan-xylanohydrolase; glycosyl hydrolase, xylanase, family F/10 of glycosyl hydrolases, glycosyltransferase; 1.40A {Clostridium thermocellum} SCOP: c.1.8.3 Back     alignment and structure
>3f5l_A Beta-glucosidase; beta-alpha-barrels, glycosidase, hydrolase; HET: LB2 MES; 1.37A {Oryza sativa japonica group} PDB: 3aht_A* 3ahv_A* 3f5i_A* 3f5j_A* 3f5k_A* 3f4v_A* 2rgm_A* 2rgl_A* 3scr_A* 3scs_A* 3scp_A* 3scq_A* 3scu_A* 3scn_A* 3sco_A* 3sct_A* 3scv_A* 3scw_A* Back     alignment and structure
>3qr3_A Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A {Hypocrea jecorina} Back     alignment and structure
>3gnp_A OS03G0212800 protein; beta-alpha barrel, glycosidase, hydrolase; HET: SOG; 1.80A {Oryza sativa subsp} PDB: 3gno_A* 3gnr_A* Back     alignment and structure
>3vii_A Beta-glucosidase; cellulases, glycosyl hydrolase, hydrolase; HET: BTB; 0.97A {Neotermes koshunensis} PDB: 3ahz_A* 3vif_A* 3vih_A 3vig_A* 3vim_A* 3ai0_A* 3vin_A* 3vio_A* 3vip_A* 3vij_A* 3vik_A* 3vil_A* Back     alignment and structure
>4b3l_A Beta-glucosidase; hydrolase, glycosidase, carbohydrate-active enzyme; 2.51A {Streptococcus pyogenes} PDB: 4b3k_A Back     alignment and structure
>3qom_A 6-phospho-beta-glucosidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, glycoside hydrolase, hydrolase; HET: BGC; 1.50A {Lactobacillus plantarum} SCOP: c.1.8.0 PDB: 4gze_A Back     alignment and structure
>3ptm_A Beta-glucosidase OS4BGlu12; beta-alpha barrel, glycosidase, hydrolase; HET: G2F; 2.40A {Oryza sativa} PDB: 3ptk_A* 3ptq_A* Back     alignment and structure
>4atd_A Raucaffricine-O-beta-D-glucosidase; alkaloid, hydrolase; 2.10A {Rauvolfia serpentina} PDB: 4a3y_A 3u5u_A 3u57_A 3u5y_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 669
d2je8a5348 c.1.8.3 (A:331-678) Five-domain beta-mannosidase, 3e-42
d2je8a5 348 c.1.8.3 (A:331-678) Five-domain beta-mannosidase, 3e-15
d2je8a5348 c.1.8.3 (A:331-678) Five-domain beta-mannosidase, 7e-14
d2je8a5348 c.1.8.3 (A:331-678) Five-domain beta-mannosidase, 2e-11
d2vzsa5339 c.1.8.3 (A:336-674) Exochitosanase CsxA {Amycolato 1e-37
d2vzsa5 339 c.1.8.3 (A:336-674) Exochitosanase CsxA {Amycolato 1e-12
d2vzsa5339 c.1.8.3 (A:336-674) Exochitosanase CsxA {Amycolato 7e-06
d2vzsa5339 c.1.8.3 (A:336-674) Exochitosanase CsxA {Amycolato 1e-04
d1bhga3304 c.1.8.3 (A:329-632) beta-Glucuronidase, domain 3 { 5e-12
d1bhga3304 c.1.8.3 (A:329-632) beta-Glucuronidase, domain 3 { 3e-05
d1bhga3304 c.1.8.3 (A:329-632) beta-Glucuronidase, domain 3 { 5e-05
d1bhga3 304 c.1.8.3 (A:329-632) beta-Glucuronidase, domain 3 { 4e-04
d1yq2a5297 c.1.8.3 (A:313-609) beta-Galactosidase, domain 3 { 1e-09
d1yq2a5297 c.1.8.3 (A:313-609) beta-Galactosidase, domain 3 { 2e-05
d1yq2a5297 c.1.8.3 (A:313-609) beta-Galactosidase, domain 3 { 4e-05
d1yq2a5297 c.1.8.3 (A:313-609) beta-Galactosidase, domain 3 { 0.003
d2vzsa1110 b.1.4.1 (A:226-335) Exochitosanase CsxA, domains 2 1e-07
d2c0ha1350 c.1.8.3 (A:18-367) endo-1,4-beta-mannosidase {Blue 3e-06
d2je8a1111 b.1.4.1 (A:220-330) Beta-mannosidase, domains 2, 4 1e-05
d1jz8a5292 c.1.8.3 (A:334-625) beta-Galactosidase, domain 3 { 4e-05
d1jz8a5292 c.1.8.3 (A:334-625) beta-Galactosidase, domain 3 { 6e-05
d1jz8a5292 c.1.8.3 (A:334-625) beta-Galactosidase, domain 3 { 2e-04
d1bhga1103 b.1.4.1 (A:226-328) beta-Glucuronidase {Human (Hom 2e-04
d1qnra_344 c.1.8.3 (A:) Beta-mannanase {Trichoderma reesei [T 6e-04
d1rh9a1370 c.1.8.3 (A:30-399) Beta-mannanase {Tomato (Lycoper 8e-04
d1rh9a1370 c.1.8.3 (A:30-399) Beta-mannanase {Tomato (Lycoper 0.001
d1uuqa_410 c.1.8.3 (A:) Exomannosidase {Cellvibrio mixtus [Ta 0.001
>d2je8a5 c.1.8.3 (A:331-678) Five-domain beta-mannosidase, domain 3 {Bacteroides thetaiotaomicron [TaxId: 818]} Length = 348 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: beta-glycanases
domain: Five-domain beta-mannosidase, domain 3
species: Bacteroides thetaiotaomicron [TaxId: 818]

 Score =  154 bits (389), Expect = 3e-42
 Identities = 90/293 (30%), Positives = 138/293 (47%), Gaps = 21/293 (7%)

Query: 254 ESTIRDLLVSTKEANMNMLRVWGGGVYMSDYFYETCDELGILIWQDMMFACNNYPATPTF 313
               + L    KEANMNM+R+WGGG Y ++ FY+  DE GIL+WQD MFAC  YP+ PTF
Sbjct: 44  TERYQTLFRDMKEANMNMVRIWGGGTYENNLFYDLADENGILVWQDFMFACTPYPSDPTF 103

Query: 314 LQSVRSEISQTVRRVQHHPCIAVWAGNNEMEGAT----IQKWYIRENPELYYKEYAELYV 369
           L+ V +E    +RR+++H  +A+W GNNE+  A      +K +  E  +     Y +L+ 
Sbjct: 104 LKRVEAEAVYNIRRLRNHASLAMWCGNNEILEALKYWGFEKKFTPEVYQGLMHGYDKLFR 163

Query: 370 NTLKPIVLQYDPTRPYLTSSPTNGIESEKAKYALADNPYSNIYGDTHNYDYYQNLWDPST 429
             L   V ++D  R Y+ SSP                 +           Y +  ++   
Sbjct: 164 ELLPSTVKEFDSDRFYVHSSPYLANWGR-------PESWGTGDSHNWGVWYGKKPFESLD 216

Query: 430 APKSRFCSEFGIQSLPQLSTFQKVATEADLASWRTPFFDSRQHLAGGTGILESSVGHQFE 489
               RF SEFG QS P++ T    A   D     +   ++ Q  + G  ++ + +   + 
Sbjct: 217 TDLPRFMSEFGFQSFPEMKTIAAFAAPEDY-QIESEVMNAHQKSSIGNSLIRTYMERDYI 275

Query: 490 IGNLTLEYFAYLSQIYQAGAIKTITEQMRRDKGVLREDGSGHNMGALYWQLND 542
           I   + E F Y+  + Q   ++   E  RR++         + MG LYWQLND
Sbjct: 276 IPE-SFEDFVYVGLVLQGQGMRHGLEAHRRNR--------PYCMGTLYWQLND 319
>d2je8a5 c.1.8.3 (A:331-678) Five-domain beta-mannosidase, domain 3 {Bacteroides thetaiotaomicron [TaxId: 818]} Length = 348 Back     information, alignment and structure
>d2je8a5 c.1.8.3 (A:331-678) Five-domain beta-mannosidase, domain 3 {Bacteroides thetaiotaomicron [TaxId: 818]} Length = 348 Back     information, alignment and structure
>d2je8a5 c.1.8.3 (A:331-678) Five-domain beta-mannosidase, domain 3 {Bacteroides thetaiotaomicron [TaxId: 818]} Length = 348 Back     information, alignment and structure
>d2vzsa5 c.1.8.3 (A:336-674) Exochitosanase CsxA {Amycolatopsis orientalis [TaxId: 31958]} Length = 339 Back     information, alignment and structure
>d2vzsa5 c.1.8.3 (A:336-674) Exochitosanase CsxA {Amycolatopsis orientalis [TaxId: 31958]} Length = 339 Back     information, alignment and structure
>d2vzsa5 c.1.8.3 (A:336-674) Exochitosanase CsxA {Amycolatopsis orientalis [TaxId: 31958]} Length = 339 Back     information, alignment and structure
>d2vzsa5 c.1.8.3 (A:336-674) Exochitosanase CsxA {Amycolatopsis orientalis [TaxId: 31958]} Length = 339 Back     information, alignment and structure
>d1bhga3 c.1.8.3 (A:329-632) beta-Glucuronidase, domain 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 304 Back     information, alignment and structure
>d1bhga3 c.1.8.3 (A:329-632) beta-Glucuronidase, domain 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 304 Back     information, alignment and structure
>d1bhga3 c.1.8.3 (A:329-632) beta-Glucuronidase, domain 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 304 Back     information, alignment and structure
>d1bhga3 c.1.8.3 (A:329-632) beta-Glucuronidase, domain 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 304 Back     information, alignment and structure
>d1yq2a5 c.1.8.3 (A:313-609) beta-Galactosidase, domain 3 {Arthrobacter sp. c2-2 [TaxId: 192168]} Length = 297 Back     information, alignment and structure
>d1yq2a5 c.1.8.3 (A:313-609) beta-Galactosidase, domain 3 {Arthrobacter sp. c2-2 [TaxId: 192168]} Length = 297 Back     information, alignment and structure
>d1yq2a5 c.1.8.3 (A:313-609) beta-Galactosidase, domain 3 {Arthrobacter sp. c2-2 [TaxId: 192168]} Length = 297 Back     information, alignment and structure
>d1yq2a5 c.1.8.3 (A:313-609) beta-Galactosidase, domain 3 {Arthrobacter sp. c2-2 [TaxId: 192168]} Length = 297 Back     information, alignment and structure
>d2vzsa1 b.1.4.1 (A:226-335) Exochitosanase CsxA, domains 2, 4 and 5 {Amycolatopsis orientalis [TaxId: 31958]} Length = 110 Back     information, alignment and structure
>d2c0ha1 c.1.8.3 (A:18-367) endo-1,4-beta-mannosidase {Blue mussel (Mytilus edulis) [TaxId: 6550]} Length = 350 Back     information, alignment and structure
>d2je8a1 b.1.4.1 (A:220-330) Beta-mannosidase, domains 2, 4 and 5 {Bacteroides thetaiotaomicron [TaxId: 818]} Length = 111 Back     information, alignment and structure
>d1jz8a5 c.1.8.3 (A:334-625) beta-Galactosidase, domain 3 {Escherichia coli [TaxId: 562]} Length = 292 Back     information, alignment and structure
>d1jz8a5 c.1.8.3 (A:334-625) beta-Galactosidase, domain 3 {Escherichia coli [TaxId: 562]} Length = 292 Back     information, alignment and structure
>d1jz8a5 c.1.8.3 (A:334-625) beta-Galactosidase, domain 3 {Escherichia coli [TaxId: 562]} Length = 292 Back     information, alignment and structure
>d1bhga1 b.1.4.1 (A:226-328) beta-Glucuronidase {Human (Homo sapiens) [TaxId: 9606]} Length = 103 Back     information, alignment and structure
>d1qnra_ c.1.8.3 (A:) Beta-mannanase {Trichoderma reesei [TaxId: 51453]} Length = 344 Back     information, alignment and structure
>d1rh9a1 c.1.8.3 (A:30-399) Beta-mannanase {Tomato (Lycopersicon esculentum) [TaxId: 4081]} Length = 370 Back     information, alignment and structure
>d1rh9a1 c.1.8.3 (A:30-399) Beta-mannanase {Tomato (Lycopersicon esculentum) [TaxId: 4081]} Length = 370 Back     information, alignment and structure
>d1uuqa_ c.1.8.3 (A:) Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} Length = 410 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query669
d2je8a5348 Five-domain beta-mannosidase, domain 3 {Bacteroide 100.0
d2vzsa5339 Exochitosanase CsxA {Amycolatopsis orientalis [Tax 100.0
d1bhga3304 beta-Glucuronidase, domain 3 {Human (Homo sapiens) 100.0
d1yq2a5297 beta-Galactosidase, domain 3 {Arthrobacter sp. c2- 99.97
d1jz8a5292 beta-Galactosidase, domain 3 {Escherichia coli [Ta 99.97
d1bhga3 304 beta-Glucuronidase, domain 3 {Human (Homo sapiens) 99.78
d2c0ha1350 endo-1,4-beta-mannosidase {Blue mussel (Mytilus ed 99.76
d1qnra_344 Beta-mannanase {Trichoderma reesei [TaxId: 51453]} 99.73
d1uuqa_410 Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} 99.73
d1yq2a5 297 beta-Galactosidase, domain 3 {Arthrobacter sp. c2- 99.7
d2je8a5 348 Five-domain beta-mannosidase, domain 3 {Bacteroide 99.69
d1rh9a1370 Beta-mannanase {Tomato (Lycopersicon esculentum) [ 99.66
d1jz8a5 292 beta-Galactosidase, domain 3 {Escherichia coli [Ta 99.64
d1bqca_302 Beta-mannanase {Thermomonospora fusca [TaxId: 2021 99.64
d2vzsa5 339 Exochitosanase CsxA {Amycolatopsis orientalis [Tax 99.62
d1wkya2297 Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 2449 99.56
d1egza_291 Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: 99.54
d1tg7a5354 Beta-galactosidase LacA, N-terminal domain {Penici 99.53
d2je8a1111 Beta-mannosidase, domains 2, 4 and 5 {Bacteroides 99.5
d1tvna1293 Endoglucanase Cel5a {Pseudoalteromonas haloplankti 99.47
d2vzsa1110 Exochitosanase CsxA, domains 2, 4 and 5 {Amycolato 99.44
d7a3ha_300 Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId 99.41
d1ecea_358 Endocellulase E1 {Acidothermus cellulolyticus [Tax 99.25
d1jz8a1114 beta-Galactosidase, domains 2 and 4 {Escherichia c 99.08
d1g01a_357 Alkaline cellulase K catalytic domain {Bacillus sp 98.96
d1bhga1103 beta-Glucuronidase {Human (Homo sapiens) [TaxId: 9 98.89
d1yq2a293 beta-Galactosidase, domains 2 and 4 {Arthrobacter 98.8
d1ceoa_340 Endoglucanase CelC {Clostridium thermocellum [TaxI 98.58
d1h1na_305 Endocellulase EngI {Thermoascus aurantiacus [TaxId 98.53
d2pb1a1394 Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) 98.35
d2c0ha1 350 endo-1,4-beta-mannosidase {Blue mussel (Mytilus ed 98.27
d1qnra_ 344 Beta-mannanase {Trichoderma reesei [TaxId: 51453]} 98.26
d1rh9a1 370 Beta-mannanase {Tomato (Lycopersicon esculentum) [ 98.17
d1uuqa_ 410 Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} 98.11
d1vjza_325 Endoglucanase homologue TM1752 {Thermotoga maritim 97.98
d1bqca_ 302 Beta-mannanase {Thermomonospora fusca [TaxId: 2021 97.93
d1wkya2 297 Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 2449 97.77
d1h4pa_408 Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharom 97.7
d1kwga2393 A4 beta-galactosidase {Thermus thermophilus [TaxId 97.55
d1ur4a_387 Beta-1,4-galactanase {Bacillus licheniformis [TaxI 97.43
d1tg7a5 354 Beta-galactosidase LacA, N-terminal domain {Penici 97.28
d1uhva2346 Beta-D-xylosidase, catalytic domain {Thermoanaerob 97.26
d1edga_380 Endoglucanase CelA {Clostridium cellulolyticum [Ta 97.05
d1egza_291 Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: 97.01
d7a3ha_ 300 Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId 96.72
d1hjsa_332 Beta-1,4-galactanase {Thielavia heterothallica, ak 96.64
d1tvna1293 Endoglucanase Cel5a {Pseudoalteromonas haloplankti 96.59
d1foba_334 Beta-1,4-galactanase {Fungus (Aspergillus aculeatu 96.26
d1qw9a2367 Alpha-L-arabinofuranosidase, catalytic domain {Bac 95.93
d1ceoa_ 340 Endoglucanase CelC {Clostridium thermocellum [TaxI 95.69
d1ecea_ 358 Endocellulase E1 {Acidothermus cellulolyticus [Tax 94.65
d1fh9a_312 Xylanase A, catalytic core {Cellulomonas fimi [Tax 92.14
d1vbua1324 Xylanase {Thermotoga maritima [TaxId: 2336]} 89.87
d1ghsa_306 Plant beta-glucanases {Barley (Hordeum vulgare), 1 89.11
d1vjza_ 325 Endoglucanase homologue TM1752 {Thermotoga maritim 86.91
d1g01a_ 357 Alkaline cellulase K catalytic domain {Bacillus sp 86.87
d1nq6a_302 Xylanase A, catalytic core {Streptomyces halstedii 86.24
d1xyza_320 Xylanase {Clostridium thermocellum, XynZ [TaxId: 1 85.85
d2pb1a1 394 Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) 84.23
d2j78a1443 Beta-glucosidase A {Thermotoga maritima [TaxId: 23 83.22
d1gnxa_464 Beta-glucosidase A {Streptomyces sp. [TaxId: 1931] 83.08
d1h1na_ 305 Endocellulase EngI {Thermoascus aurantiacus [TaxId 83.0
d1e4ia_447 Beta-glucosidase A {Bacillus polymyxa [TaxId: 1406 82.94
>d2je8a5 c.1.8.3 (A:331-678) Five-domain beta-mannosidase, domain 3 {Bacteroides thetaiotaomicron [TaxId: 818]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: beta-glycanases
domain: Five-domain beta-mannosidase, domain 3
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=100.00  E-value=1.9e-46  Score=387.58  Aligned_cols=319  Identities=35%  Similarity=0.651  Sum_probs=237.8

Q ss_pred             EEEEEeeecCCCccccCCceEEEEEcCEEeEeccccccCCCCCCCCCCcchhhhhhhhhhhhhhccceeecCCccccccc
Q psy438          123 RTVELIQDHVDPNHLEKGRYFYFEVNKVPIYSKGSNLIPVDILPERSNNESTIRDLLVSTKEANMNMLRVWGGGVYMSDY  202 (669)
Q Consensus       123 R~i~~~~~~~~~~~~~~G~~~~~~lNG~~v~~rG~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  202 (669)
                      ||||+..+..     +.|+.|+|+|||+||||||+|+|+.+.+.++.+                                
T Consensus         1 rtie~~~~~~-----~~g~~~~f~lNG~p~~lrG~~~~~~~~~~~~~~--------------------------------   43 (348)
T d2je8a5           1 RTIRVVNEKD-----KDGESFYFEVNGIPMFAKGANYIPQDALLPNVT--------------------------------   43 (348)
T ss_dssp             CCEEEECCEE-----TTEECCEEEETTEEECEEEEEECCSCSSGGGCC--------------------------------
T ss_pred             CeEEEEeecC-----CCCCeeEEEECCEEEEEeeEecCCCCCCCCCCC--------------------------------
Confidence            7899865543     258889999999999999999998776544322                                


Q ss_pred             cCCCCcCCcccCCCcchhhhhhhhhhhhhhhhhhhcCCccccccccccccchHHHHHHHHHHHHcCCCEEEccCCCCCCc
Q psy438          203 FYEPVDILPERSNNESTIRDLLVSTKEANMNMLRVWGGGVYMTRYTDMARHESTIRDLLVSTKEANMNMLRVWGGGVYMS  282 (669)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~l~~~k~~g~N~iR~~~g~~~~~  282 (669)
                                                                         ++.++++|+++|++|+|+||+|+++|+|+
T Consensus        44 ---------------------------------------------------~e~~~~di~l~ke~G~N~IR~~~~~~~p~   72 (348)
T d2je8a5          44 ---------------------------------------------------TERYQTLFRDMKEANMNMVRIWGGGTYEN   72 (348)
T ss_dssp             ---------------------------------------------------HHHHHHHHHHHHHTTCCEEEECTTSCCCC
T ss_pred             ---------------------------------------------------HHHHHHHHHHHHHcCCCEEecCCCCCCCC
Confidence                                                               23688899999999999999999777889


Q ss_pred             HHHHHHHHHcCCEEEeecccccCCCCCChHHHHHHHHHHHHHHHHhCCCcceEeecccCCcchhhhh-hhccccChhhHH
Q psy438          283 DYFYETCDELGILIWQDMMFACNNYPATPTFLQSVRSEISQTVRRVQHHPCIAVWAGNNEMEGATIQ-KWYIRENPELYY  361 (669)
Q Consensus       283 ~~~~~~cDe~Gilv~~e~~~~~~~~p~~~~~~~~~~~~~~~~v~r~rnHPSi~~W~~~NE~~~~~~~-~~~~~~~~~~~~  361 (669)
                      ++|||+|||+|||||+|+|+.+..++.++.+.+.++++++++|+|+|||||||+|+++||....... .+.....+..+.
T Consensus        73 ~~f~d~cD~~GilV~~e~~~~~~~~~~~~~~~~~~~~~~~~~I~r~rNHPSIi~W~~gnE~~~~~~~~~~~~~~~~~~~~  152 (348)
T d2je8a5          73 NLFYDLADENGILVWQDFMFACTPYPSDPTFLKRVEAEAVYNIRRLRNHASLAMWCGNNEILEALKYWGFEKKFTPEVYQ  152 (348)
T ss_dssp             HHHHHHHHHHTCEEEEECSCBSSCCCCCHHHHHHHHHHHHHHHHHHTTCTTEEEEESCBSHHHHHHHSCTTTTSCHHHHH
T ss_pred             HHHHHHHHHCCCEEEeccchhccCCCCCHHHHHHHHHHHHHHHHHhcCCCeEEEEeccCccccchhhccchhhhhHHHHH
Confidence            9999999999999999999998888999999999999999999999999999999999998654321 111112222222


Q ss_pred             H---HHHHHHHHHHHHHHHhhCCCCCEEecCCCCCcccccccccccCCCCCCCCCcccccccccc--cCCCCCCCCCccc
Q psy438          362 K---EYAELYVNTLKPIVLQYDPTRPYLTSSPTNGIESEKAKYALADNPYSNIYGDTHNYDYYQN--LWDPSTAPKSRFC  436 (669)
Q Consensus       362 ~---~~~~~~~~~l~~~v~~~DptRp~~~~S~~~~~~~~~~~~~~~~~py~~~~gd~h~y~~~~~--~~~~~~~~~~~f~  436 (669)
                      .   .....+...+...+++.||+|+++.+|+........         +....++.+.|..+..  .........+.|+
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (348)
T d2je8a5         153 GLMHGYDKLFRELLPSTVKEFDSDRFYVHSSPYLANWGRP---------ESWGTGDSHNWGVWYGKKPFESLDTDLPRFM  223 (348)
T ss_dssp             HHHHHHHHHHTTHHHHHHHHHCTTSEEESSBSSSCCTTCG---------GGTTBSCEECCTTTTTCCCGGGGGTSCCSSE
T ss_pred             HHHHhhhhhHHHHHHHHHHHhCCCCceecCCCccccCCCc---------cccccccccccccccccCchhhhhccCCcce
Confidence            1   122334456677889999999999988765432211         1111222222221111  0111122468899


Q ss_pred             cccccCCCCCcchhcccCCcccccCCCCcccccccccCCchHHHHHHHhhhcCCCCccHHHHHHHhhHhHHHHHHHHHHH
Q psy438          437 SEFGIQSLPQLSTFQKVATEADLASWRTPFFDSRQHLAGGTGILESSVGHQFEIGNLTLEYFAYLSQIYQAGAIKTITEQ  516 (669)
Q Consensus       437 sE~G~~s~p~~~sl~~~~~~~~~~~~~~~~~~h~~~~~~G~~~~~~~i~~~yg~P~d~ledFvy~SQvmQae~~R~~iE~  516 (669)
                      +|+|+.+.|.+++..+...+.+. .+.+...........|...+..++...++.+++ +++|++.||.+|+++++.++|.
T Consensus       224 ~e~g~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~sq~~q~~~~~~~~e~  301 (348)
T d2je8a5         224 SEFGFQSFPEMKTIAAFAAPEDY-QIESEVMNAHQKSSIGNSLIRTYMERDYIIPES-FEDFVYVGLVLQGQGMRHGLEA  301 (348)
T ss_dssp             EECCCCBCCCHHHHHHHCCGGGC-STTSHHHHHTBCSSSCTHHHHHHHHHHSCCCSS-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             eeeccccCCcccccccccCcccc-cccccccccccccccchHHHHHhhhhccCCccc-hHHHHHhhHHHHHHHHHHHHHH
Confidence            99999999999999998887776 444444333333335566677777777888876 9999999999999999999999


Q ss_pred             HHhcccccccCCCCCCCCCeeEeeccccCccc
Q psy438          517 MRRDKGVLREDGSGHNMGALYWQLNDTCDELG  548 (669)
Q Consensus       517 ~Rr~~n~~R~~g~~~~sG~LyWq~nd~~D~~G  548 (669)
                      +|+...        .+.|.++|+++|.|+..+
T Consensus       302 ~~r~~~--------~~~G~~~w~~~D~~p~~~  325 (348)
T d2je8a5         302 HRRNRP--------YCMGTLYWQLNDSWPVVS  325 (348)
T ss_dssp             HHHTTT--------TCCEEEESCSCCSSSCBB
T ss_pred             HhccCC--------CeeEEEEecccCccccCc
Confidence            998543        378999999999999865
>d2vzsa5 c.1.8.3 (A:336-674) Exochitosanase CsxA {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d1bhga3 c.1.8.3 (A:329-632) beta-Glucuronidase, domain 3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1yq2a5 c.1.8.3 (A:313-609) beta-Galactosidase, domain 3 {Arthrobacter sp. c2-2 [TaxId: 192168]} Back     information, alignment and structure
>d1jz8a5 c.1.8.3 (A:334-625) beta-Galactosidase, domain 3 {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1bhga3 c.1.8.3 (A:329-632) beta-Glucuronidase, domain 3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2c0ha1 c.1.8.3 (A:18-367) endo-1,4-beta-mannosidase {Blue mussel (Mytilus edulis) [TaxId: 6550]} Back     information, alignment and structure
>d1qnra_ c.1.8.3 (A:) Beta-mannanase {Trichoderma reesei [TaxId: 51453]} Back     information, alignment and structure
>d1uuqa_ c.1.8.3 (A:) Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} Back     information, alignment and structure
>d1yq2a5 c.1.8.3 (A:313-609) beta-Galactosidase, domain 3 {Arthrobacter sp. c2-2 [TaxId: 192168]} Back     information, alignment and structure
>d2je8a5 c.1.8.3 (A:331-678) Five-domain beta-mannosidase, domain 3 {Bacteroides thetaiotaomicron [TaxId: 818]} Back     information, alignment and structure
>d1rh9a1 c.1.8.3 (A:30-399) Beta-mannanase {Tomato (Lycopersicon esculentum) [TaxId: 4081]} Back     information, alignment and structure
>d1jz8a5 c.1.8.3 (A:334-625) beta-Galactosidase, domain 3 {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1bqca_ c.1.8.3 (A:) Beta-mannanase {Thermomonospora fusca [TaxId: 2021]} Back     information, alignment and structure
>d2vzsa5 c.1.8.3 (A:336-674) Exochitosanase CsxA {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d1wkya2 c.1.8.3 (A:34-330) Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 244966]} Back     information, alignment and structure
>d1egza_ c.1.8.3 (A:) Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: 556]} Back     information, alignment and structure
>d1tg7a5 c.1.8.14 (A:41-394) Beta-galactosidase LacA, N-terminal domain {Penicillium sp. [TaxId: 5081]} Back     information, alignment and structure
>d2je8a1 b.1.4.1 (A:220-330) Beta-mannosidase, domains 2, 4 and 5 {Bacteroides thetaiotaomicron [TaxId: 818]} Back     information, alignment and structure
>d1tvna1 c.1.8.3 (A:1-293) Endoglucanase Cel5a {Pseudoalteromonas haloplanktis [TaxId: 228]} Back     information, alignment and structure
>d2vzsa1 b.1.4.1 (A:226-335) Exochitosanase CsxA, domains 2, 4 and 5 {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d7a3ha_ c.1.8.3 (A:) Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId: 76935]} Back     information, alignment and structure
>d1ecea_ c.1.8.3 (A:) Endocellulase E1 {Acidothermus cellulolyticus [TaxId: 28049]} Back     information, alignment and structure
>d1jz8a1 b.1.4.1 (A:220-333) beta-Galactosidase, domains 2 and 4 {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1g01a_ c.1.8.3 (A:) Alkaline cellulase K catalytic domain {Bacillus sp. [TaxId: 1409]} Back     information, alignment and structure
>d1bhga1 b.1.4.1 (A:226-328) beta-Glucuronidase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1yq2a2 b.1.4.1 (A:220-312) beta-Galactosidase, domains 2 and 4 {Arthrobacter sp. c2-2 [TaxId: 192168]} Back     information, alignment and structure
>d1ceoa_ c.1.8.3 (A:) Endoglucanase CelC {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1h1na_ c.1.8.3 (A:) Endocellulase EngI {Thermoascus aurantiacus [TaxId: 5087]} Back     information, alignment and structure
>d2pb1a1 c.1.8.3 (A:7-400) Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) [TaxId: 5476]} Back     information, alignment and structure
>d2c0ha1 c.1.8.3 (A:18-367) endo-1,4-beta-mannosidase {Blue mussel (Mytilus edulis) [TaxId: 6550]} Back     information, alignment and structure
>d1qnra_ c.1.8.3 (A:) Beta-mannanase {Trichoderma reesei [TaxId: 51453]} Back     information, alignment and structure
>d1rh9a1 c.1.8.3 (A:30-399) Beta-mannanase {Tomato (Lycopersicon esculentum) [TaxId: 4081]} Back     information, alignment and structure
>d1uuqa_ c.1.8.3 (A:) Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} Back     information, alignment and structure
>d1vjza_ c.1.8.3 (A:) Endoglucanase homologue TM1752 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1bqca_ c.1.8.3 (A:) Beta-mannanase {Thermomonospora fusca [TaxId: 2021]} Back     information, alignment and structure
>d1wkya2 c.1.8.3 (A:34-330) Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 244966]} Back     information, alignment and structure
>d1h4pa_ c.1.8.3 (A:) Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1kwga2 c.1.8.1 (A:1-393) A4 beta-galactosidase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1ur4a_ c.1.8.3 (A:) Beta-1,4-galactanase {Bacillus licheniformis [TaxId: 1402]} Back     information, alignment and structure
>d1tg7a5 c.1.8.14 (A:41-394) Beta-galactosidase LacA, N-terminal domain {Penicillium sp. [TaxId: 5081]} Back     information, alignment and structure
>d1uhva2 c.1.8.3 (A:14-359) Beta-D-xylosidase, catalytic domain {Thermoanaerobacterium saccharolyticum [TaxId: 28896]} Back     information, alignment and structure
>d1edga_ c.1.8.3 (A:) Endoglucanase CelA {Clostridium cellulolyticum [TaxId: 1521]} Back     information, alignment and structure
>d1egza_ c.1.8.3 (A:) Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: 556]} Back     information, alignment and structure
>d7a3ha_ c.1.8.3 (A:) Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId: 76935]} Back     information, alignment and structure
>d1hjsa_ c.1.8.3 (A:) Beta-1,4-galactanase {Thielavia heterothallica, aka Myceliophthora thermophila [TaxId: 78579]} Back     information, alignment and structure
>d1tvna1 c.1.8.3 (A:1-293) Endoglucanase Cel5a {Pseudoalteromonas haloplanktis [TaxId: 228]} Back     information, alignment and structure
>d1foba_ c.1.8.3 (A:) Beta-1,4-galactanase {Fungus (Aspergillus aculeatus) [TaxId: 5053]} Back     information, alignment and structure
>d1qw9a2 c.1.8.3 (A:18-384) Alpha-L-arabinofuranosidase, catalytic domain {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1ceoa_ c.1.8.3 (A:) Endoglucanase CelC {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1ecea_ c.1.8.3 (A:) Endocellulase E1 {Acidothermus cellulolyticus [TaxId: 28049]} Back     information, alignment and structure
>d1fh9a_ c.1.8.3 (A:) Xylanase A, catalytic core {Cellulomonas fimi [TaxId: 1708]} Back     information, alignment and structure
>d1vbua1 c.1.8.3 (A:517-840) Xylanase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1ghsa_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-beta-glucanase [TaxId: 4513]} Back     information, alignment and structure
>d1vjza_ c.1.8.3 (A:) Endoglucanase homologue TM1752 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1g01a_ c.1.8.3 (A:) Alkaline cellulase K catalytic domain {Bacillus sp. [TaxId: 1409]} Back     information, alignment and structure
>d1nq6a_ c.1.8.3 (A:) Xylanase A, catalytic core {Streptomyces halstedii [TaxId: 1944]} Back     information, alignment and structure
>d1xyza_ c.1.8.3 (A:) Xylanase {Clostridium thermocellum, XynZ [TaxId: 1515]} Back     information, alignment and structure
>d2pb1a1 c.1.8.3 (A:7-400) Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) [TaxId: 5476]} Back     information, alignment and structure
>d2j78a1 c.1.8.4 (A:3-445) Beta-glucosidase A {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1gnxa_ c.1.8.4 (A:) Beta-glucosidase A {Streptomyces sp. [TaxId: 1931]} Back     information, alignment and structure
>d1h1na_ c.1.8.3 (A:) Endocellulase EngI {Thermoascus aurantiacus [TaxId: 5087]} Back     information, alignment and structure
>d1e4ia_ c.1.8.4 (A:) Beta-glucosidase A {Bacillus polymyxa [TaxId: 1406]} Back     information, alignment and structure