Psyllid ID: psy4573

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300------
Protein Sequence
MCPYKKPSLHQVSFRFYASRKKRGHEKTLPRAKKCREVEQDGSLACNVCSKRCGSKSGLKIHMKSHTLSKRYACSICLAEFHTLTEKDRHTLSHVVEGEYKCNQCDHVAKKLAYLQAHMKKHRNEYTAYCDLCQEGFFRKAKYETHNIQKHNAPPFECESCKKIFTYHKNTTHLGIKFECEVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTKALVRHHVRSHHSSARLGLNLLDHELSMITSKG
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHcccccccHHcccccccccccccccccHHccccccHHHHHHccccccccccccccccccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccccHHHHHcccccccccccccccccccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccHHcccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccEEEcccccccccccccccEccccHHHHHccccccccccccccccccEccccHHHHHHHHcccccccccccccccEccccHHHHHHHHcccccccccccccccEccccHHHHHHHHcccccccccccccccEccccHHHHHHHHcccccccccccccccEcccccEEccccEEEccccccEEccHHHHHHHHHHHHccccEEccccccEEccHHHHHHHHHHHHccccEEccccccEEccHHHHHHHHHHHHccccEEccccccEEccHHHHHHHHHHHccccccEcccccccEccccccc
Coil and Loop (DISEMBL)
mcpykkpslhqvSFRFYASrkkrghektlprakkcreveqdgslacnvcskrcgsksglkihmksHTLSKRYACSICLAefhtltekdrhtlshvvegeykcnqcDHVAKKLAYLQAHMKKHRNEYTAYCDLCQEGffrkakyethniqkhnappfecesckkIFTYhkntthlgikfecevchrklstknhLRLHMrthtnerpavcsycgkgfrrgdaLTEHirihtgqrpyvceicgkgftqkqalnthkrghtgeipyhcefcserfstkALVRHHVrshhssarlGLNLLDHELSMITSKG
Flexible Loop (DISEMBL)
mcpykkpslhqvsfrfyasrkkrghektlprakkcreveqdgslacnvcskrcgsksglkIHMKSHTLSKRYACSICLAEFHTLTEKDRHTLSHVVEGEYKCNQCDHVAKKLAYLQAHMKKHRNEYTAYCDLCQEGFFRKAKYETHniqkhnappfECESCKKIFTYHKNTTHLGIKFECEVCHRKLSTKNHlrlhmrthtnerpavcsyCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTKALVRHHVRshhssarlglnlldhelsmitskg
Low Complexity Region (SEG)
MCPYKKPSLHQVSFRFYASRKKRGHEKTLPRAKKCREVEQDGSLACNVCSKRCGSKSGLKIHMKSHTLSKRYACSICLAEFHTLTEKDRHTLSHVVEGEYKCNQCDHVAKKLAYLQAHMKKHRNEYTAYCDLCQEGFFRKAKYETHNIQKHNAPPFECESCKKIFTYHKNTTHLGIKFECEVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTKalvrhhvrshhssarlGLNLLDHELSMITSKG
Disordered region (IsUnstruct)
******************************************SLACNVCSKRCGSKSGLKIHMKSHTLSKRYACSICLAEFHTLTEKDRHTLSHVVEGEYKCNQCDHVAKKLAYLQAHMKKHRNEYTAYCDLCQEGFFRKAKYETHNIQKHNAPPFECESCKKIFTYHKNTTHLGIKFECEVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTKALVRHHVRSHH**ARLGLNLL***********
Disordered Region (DISOPRED)
*CPYKKPSLHQVSFRFYASRKKRGHEKTLPRAKKCREVEQDGSLACNVCSKRCGSKSGLKIHMKSHTLSKRYACSICLAEFHTLTEKDRHTLSHVVEGEYKCNQCDHVAKKLAYLQAHMKKHRNEYTAYCDLCQEGFFRKAKYETHNIQKHNAPPFECESCKKIFTYHKNTTHLGIKFECEVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTKALVRHHVRSHHSSARLGLNLLDHELSMI****
Disordered Region (DISEMBL)
MCPYKKPSLHQVSFRFYASR***********AKKCREVEQDGSLACNVCSKRCGSKSGLKIHMKSHTLSKRYACSICLAEFHTLTEKDRHTLSHVVEGEYKCNQCDHVAKKLAYLQAHMKKHRNEYTAYCDLCQEGFFRKAKYETHNIQKHNAPPFECESCKKIFTYHKNTTHLGIKFECEVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTKALV**********ARLGLNLLDHELSMITSKG
Disordered Region (DISPRO)
****KKPSLHQVSFRFYASRKKRGHEKTLPRAKKCREVEQDGSLACNVCSKRCGSKSGLKIHMKSHTLSKRYACSICLAEFHTLTEKDRHTLSHVVEGEYKCNQCDHVAKKLAYLQAHMKKHRNEYTAYCDLCQEGFFRKAKYETHNIQKHNAPPFECESCKKIFTYHKNTTHLGIKFECEVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTKALVRHHVRSHHSSARLGLNLLDHE********
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MCPYKKPSLHQVSFRFYASRKKRGHEKTLPRAKKCREVEQDGSLACNVCSKRCGSKSGLKIHMKSHTLSKRYACSICLAEFHTLTEKDRHTLSHVVEGEYKCNQCDHVAKKLAYLQAHMKKHRNEYTAYCDLCQEGFFRKAKYETHNIQKHNAPPFECESCKKIFTYHKNTTHLGIKFECEVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTKALVRHHVRSHHSSARLGLNLLDHELSMITSKG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	306	2.2.26 [Sep-21-2011]
C9JN71	531	Zinc finger protein 878 O	yes	N/A	0.781	0.450	0.395	2e-43
Q9UJU3	913	Zinc finger protein 112 O	no	N/A	0.745	0.249	0.384	2e-39
A0JNB1	787	Zinc finger protein 227 O	no	N/A	0.781	0.303	0.359	2e-39
Q86WZ6	799	Zinc finger protein 227 O	no	N/A	0.781	0.299	0.359	5e-39
Q5MCW4	686	Zinc finger protein 569 O	no	N/A	0.846	0.377	0.350	3e-38
Q0VGE8	651	Zinc finger protein 816 O	no	N/A	0.781	0.367	0.379	5e-38
Q6ZMW2	699	Zinc finger protein 782 O	no	N/A	0.781	0.341	0.371	1e-37
Q0VAW7	879	Zinc finger protein 112 O	no	N/A	0.790	0.275	0.358	3e-37
A1YF12	682	Zinc finger protein 16 OS	N/A	N/A	0.784	0.351	0.373	5e-37
Q5R5U3	672	Zinc finger protein 271 O	no	N/A	0.781	0.355	0.359	9e-37

>sp|C9JN71|ZN878_HUMAN Zinc finger protein 878 OS=Homo sapiens GN=ZNF878 PE=3 SV=2

 Score =  176 bits (446), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 97/245 (39%), Positives = 129/245 (52%), Gaps = 6/245 (2%)

Query: 46  CNVCSKRCGSKSGLKIHMKSHTLSKRYACSICLAEFHTLTEKDRHTLSHVVEGEYKCNQC 105
           CN+C K   S S LK H KSHT  KRY C  C   F+  +    H  +H  E  Y+C QC
Sbjct: 229 CNICGKAFFSPSSLKRHEKSHTGEKRYKCKQCDKAFNCPSSFQYHERTHSGEKPYECTQC 288

Query: 106 DHVAKKLAYLQAHMKKHRNEYTAYCDLCQEGFFRKAKYETHNIQKHNAPPFECESCKKIF 165
               + + YL+ H +KH  E    C LC +GF     +  H        P+EC+ C K F
Sbjct: 289 RKAFRSVKYLRVHERKHTGEKPYECKLCGKGFISSTSFRYHEKTHTGEKPYECKKCVKAF 348

Query: 166 TYHKNT-----THLGIK-FECEVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGD 219
           ++ K+      TH G K FEC+ C +  ++ N    H RTHT E+P  C  CGK FR   
Sbjct: 349 SFVKDLRIHERTHTGEKPFECKQCGKTFTSSNSFHYHERTHTGEKPYECKQCGKAFRSAS 408

Query: 220 ALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTKALVRH 279
            L +HIR HTG++PY C+ CGK F     L  H+R HTGE PY C+ C + F +   +R+
Sbjct: 409 VLQKHIRTHTGEKPYGCKQCGKVFRVASQLKMHERTHTGEKPYECKQCGKAFISSNSIRY 468

Query: 280 HVRSH 284
           H R+H
Sbjct: 469 HKRTH 473

May be involved in transcriptional regulation.
Homo sapiens (taxid: 9606)

>sp|Q9UJU3|ZN112_HUMAN Zinc finger protein 112 OS=Homo sapiens GN=ZNF112 PE=2 SV=2

 Score =  162 bits (411), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 90/234 (38%), Positives = 127/234 (54%), Gaps = 6/234 (2%)

Query: 57  SGLKIHMKSHTLSKRYACSICLAEFHTLTEKDRHTLSHVVEGEYKCNQCDHVAKKLAYLQ 116
           S LK H + HT  K Y C+IC   F+  +  + H   H  E  YKC +CD    + +YLQ
Sbjct: 510 SKLKDHQRVHTGQKPYKCNICGKGFNHRSVLNVHQRVHTGEKPYKCEECDKGFSRSSYLQ 569

Query: 117 AHMKKHRNEYTAYCDLCQEGFFRKAKYETHNIQKHNAPPFECESCKKIFTYHKNT----- 171
           AH + H  E    C+ C +GF R +  + H        P++CE C K F+   +      
Sbjct: 570 AHQRVHTGEKPYKCEECGKGFSRNSYLQGHQRVHTGEKPYKCEECGKGFSRSSHLQGHQR 629

Query: 172 THLGIK-FECEVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTG 230
            H G K F+CE C +  S   +L++H R HT E+P  C  CGKGF +   L  H R+HTG
Sbjct: 630 VHTGEKPFKCEECGKGFSWSFNLQIHQRVHTGEKPYKCEECGKGFSKASTLLAHQRVHTG 689

Query: 231 QRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTKALVRHHVRSH 284
           ++PY C+ CGK F+Q+  L +H+  H+GE PY CE C + FS +A ++ H R H
Sbjct: 690 EKPYQCDECGKSFSQRSYLQSHQSVHSGERPYICEVCGKGFSQRAYLQGHQRVH 743

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|A0JNB1|ZN227_BOVIN Zinc finger protein 227 OS=Bos taurus GN=ZNF227 PE=2 SV=1

 Score =  162 bits (411), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 88/245 (35%), Positives = 118/245 (48%), Gaps = 6/245 (2%)

Query: 46  CNVCSKRCGSKSGLKIHMKSHTLSKRYACSICLAEFHTLTEKDRHTLSHVVEGEYKCNQC 105
           C  C K     + L IH + HT  K Y C  C   F   +    H   H  E  +KC  C
Sbjct: 454 CEACGKGFTRNTDLHIHFRVHTGEKPYTCKECGKGFSQASNLQVHQNVHTGEKRFKCETC 513

Query: 106 DHVAKKLAYLQAHMKKHRNEYTAYCDLCQEGFFRKAKYETHNIQKHNAPPFECESCKKIF 165
                + + LQ H + H  E    CD+C + F   +  + H +      P+ CE+C K F
Sbjct: 514 GKGFSQSSKLQTHQRVHTGEKPYRCDVCGKDFSYSSNLKLHQVIHTGEKPYTCEACGKGF 573

Query: 166 TYHKNT-----THLGIK-FECEVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGD 219
           ++  N       H G K ++CE C +  S     R+H R HT E+P  C  CGKGF +  
Sbjct: 574 SWRSNLHAHQRVHSGEKPYKCEACDKSFSQAIDFRVHQRVHTGEKPYKCGVCGKGFSQSS 633

Query: 220 ALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTKALVRH 279
            L  H R+HTG++PY C++CGKGF        H+RGHTGE PY CE C + F     +RH
Sbjct: 634 GLQSHQRVHTGEKPYKCDVCGKGFRYSSQFIYHQRGHTGEKPYKCEECGKGFGRSLNLRH 693

Query: 280 HVRSH 284
           H R H
Sbjct: 694 HQRVH 698

May be involved in transcriptional regulation.

Bos taurus (taxid: 9913)

>sp|Q86WZ6|ZN227_HUMAN Zinc finger protein 227 OS=Homo sapiens GN=ZNF227 PE=2 SV=1

 Score =  161 bits (408), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 88/245 (35%), Positives = 118/245 (48%), Gaps = 6/245 (2%)

Query: 46  CNVCSKRCGSKSGLKIHMKSHTLSKRYACSICLAEFHTLTEKDRHTLSHVVEGEYKCNQC 105
           C  C K     + L IH + HT  K Y C  C   F   +    H   H  E  +KC  C
Sbjct: 466 CEACGKGFTRNTDLHIHFRVHTGEKPYKCKECGKGFSQASNLQVHQNVHTGEKRFKCETC 525

Query: 106 DHVAKKLAYLQAHMKKHRNEYTAYCDLCQEGFFRKAKYETHNIQKHNAPPFECESCKKIF 165
                + + LQ H + H  E    CD+C + F   +  + H +      P++CE C K F
Sbjct: 526 GKGFSQSSKLQTHQRVHTGEKPYRCDVCGKDFSYSSNLKLHQVIHTGEKPYKCEECGKGF 585

Query: 166 TYHKNT-----THLGIK-FECEVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGD 219
           ++  N       H G K ++CE C +  S     R+H R HT E+P  C  CGKGF +  
Sbjct: 586 SWRSNLHAHQRVHSGEKPYKCEQCDKSFSQAIDFRVHQRVHTGEKPYKCGVCGKGFSQSS 645

Query: 220 ALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTKALVRH 279
            L  H R+HTG++PY C++CGKGF        H+RGHTGE PY CE C + F     +RH
Sbjct: 646 GLQSHQRVHTGEKPYKCDVCGKGFRYSSQFIYHQRGHTGEKPYKCEECGKGFGRSLNLRH 705

Query: 280 HVRSH 284
           H R H
Sbjct: 706 HQRVH 710

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q5MCW4|ZN569_HUMAN Zinc finger protein 569 OS=Homo sapiens GN=ZNF569 PE=2 SV=1

 Score =  159 bits (402), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 93/265 (35%), Positives = 126/265 (47%), Gaps = 6/265 (2%)

Query: 46  CNVCSKRCGSKSGLKIHMKSHTLSKRYACSICLAEFHTLTEKDRHTLSHVVEGEYKCNQC 105
           CN C K     S L +HM+SHT  K Y C  C   F        H   H  E  Y+CN+C
Sbjct: 384 CNECGKAFSQSSALTVHMRSHTGEKPYECKECRKAFSHKKNFITHQKIHTREKPYECNEC 443

Query: 106 DHVAKKLAYLQAHMKKHRNEYTAYCDLCQEGFFRKAKYETHNIQKHNAPPFECESCKKIF 165
                +++ L  H + H  E    C  C + F +K+    H        P+EC  C K F
Sbjct: 444 GKAFIQMSNLVRHQRIHTGEKPYICKECGKAFSQKSNLIAHEKIHSGEKPYECNECGKAF 503

Query: 166 TYHKN-----TTHLGIK-FECEVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGD 219
           +  +N       H G K ++C  C +  S    L LH+R+HT E+P  C  CGK F +  
Sbjct: 504 SQKQNFITHQKVHTGEKPYDCNECGKAFSQIASLTLHLRSHTGEKPYECDKCGKAFSQCS 563

Query: 220 ALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTKALVRH 279
            L  H+R HTG++PYVC  CGK F+Q+ +L  H RGHTGE PY C  C + FS  + +  
Sbjct: 564 LLNLHMRSHTGEKPYVCNECGKAFSQRTSLIVHMRGHTGEKPYECNKCGKAFSQSSSLTI 623

Query: 280 HVRSHHSSARLGLNLLDHELSMITS 304
           H+R H        +      S I+S
Sbjct: 624 HIRGHTGEKPFDCSKCGKAFSQISS 648

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q0VGE8|ZN816_HUMAN Zinc finger protein 816 OS=Homo sapiens GN=ZNF816 PE=2 SV=2

 Score =  158 bits (400), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 93/245 (37%), Positives = 121/245 (49%), Gaps = 6/245 (2%)

Query: 46  CNVCSKRCGSKSGLKIHMKSHTLSKRYACSICLAEFHTLTEKDRHTLSHVVEGEYKCNQC 105
           CN C K    KS L+ H   HT  K Y C  C   +   +  +RH   H  EG YKC  C
Sbjct: 371 CNECGKTFSQKSSLQCHHILHTGEKPYKCEECDNVYIRRSHLERHRKIHTGEGSYKCKVC 430

Query: 106 DHVAKKLAYLQAHMKKHRNEYTAYCDLCQEGFFRKAKYETHNIQKHNAPPFECESCKKIF 165
           D V +  +YL  H + H  E    C+ C   F RK+  + H+       P+ C  C K+F
Sbjct: 431 DKVFRSDSYLAEHQRVHTGEKPYKCNKCGRSFSRKSSLQYHHTLHTGEKPYTCNECGKVF 490

Query: 166 TYHKNTT-----HLGIK-FECEVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGD 219
           +  +N       H G K ++CE C +  S ++HL  H R HT E+P  C  C K FR   
Sbjct: 491 SRRENLARHHRLHAGEKPYKCEECDKVFSRRSHLERHRRIHTGEKPYKCKVCDKAFRSDS 550

Query: 220 ALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTKALVRH 279
            L  H R+HTG++PY C  C K F QK  L  H+R HTGE PY C  C + F+ KA +  
Sbjct: 551 CLANHTRVHTGEKPYKCNKCAKVFNQKGILAQHQRVHTGEKPYKCNECGKVFNQKASLAK 610

Query: 280 HVRSH 284
           H R H
Sbjct: 611 HQRVH 615

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q6ZMW2|ZN782_HUMAN Zinc finger protein 782 OS=Homo sapiens GN=ZNF782 PE=2 SV=1

 Score =  157 bits (396), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 91/245 (37%), Positives = 128/245 (52%), Gaps = 6/245 (2%)

Query: 46  CNVCSKRCGSKSGLKIHMKSHTLSKRYACSICLAEFHTLTEKDRHTLSHVVEGEYKCNQC 105
           C+ C K   +KSGL+IH ++HT  K + C  C   F+  +    H  +H  E  ++CN+C
Sbjct: 424 CDGCDKAFSAKSGLRIHQRTHTGEKPFECHECGKSFNYKSILIVHQRTHTGEKPFECNEC 483

Query: 106 DHVAKKLAYLQAHMKKHRNEYTAYCDLCQEGFFRKAKYETHNIQKHNAPPFECESCKKIF 165
                 ++ L+ H + H  E    CD C + F  K+    H+       P++C  C K F
Sbjct: 484 GKSFSHMSGLRNHRRTHTGERPYKCDECGKAFKLKSGLRKHHRTHTGEKPYKCNQCGKAF 543

Query: 166 TYHKNT-----THLGIK-FECEVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGD 219
                       H G K ++C  C    S K++LR+H RTHT E+P  C  CGK FR+  
Sbjct: 544 GQKSQLRGHHRIHTGEKPYKCNHCGEAFSQKSNLRVHHRTHTGEKPYQCEECGKTFRQKS 603

Query: 220 ALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTKALVRH 279
            L  H R HTG++PY C  CGK F++K  L  H+R HTGE PY+C  C E FS K+ +R 
Sbjct: 604 NLRGHQRTHTGEKPYECNECGKAFSEKSVLRKHQRTHTGEKPYNCNQCGEAFSQKSNLRV 663

Query: 280 HVRSH 284
           H R+H
Sbjct: 664 HQRTH 668

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q0VAW7|ZN112_MOUSE Zinc finger protein 112 OS=Mus musculus GN=Znf112 PE=2 SV=2

 Score =  155 bits (392), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 89/248 (35%), Positives = 124/248 (50%), Gaps = 6/248 (2%)

Query: 46  CNVCSKRCGSKSGLKIHMKSHTLSKRYACSICLAEFHTLTEKDRHTLSHVVEGEYKCNQC 105
           C  C K       L+IH + HT  K Y C  C   F   +    H   H  E  Y+C++C
Sbjct: 609 CEECGKGFSWSFNLQIHQRVHTGEKPYKCGECGKGFSKASTLLAHERVHTGEKPYQCHEC 668

Query: 106 DHVAKKLAYLQAHMKKHRNEYTAYCDLCQEGFFRKAKYETHNIQKHNAPPFECESCKKIF 165
                + +YLQ+H   H  E    C++C +GF ++A  + H        P++CE C K F
Sbjct: 669 GKNFSQKSYLQSHQSVHSGERPHICEVCGKGFSQRAYLQGHLRVHTRVKPYKCEVCGKGF 728

Query: 166 TYHK-----NTTHLGIK-FECEVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGD 219
           +           H G K F+CE C +  S  + L+ H R H   RP  C  CGKGF    
Sbjct: 729 SQGSRLEAHQRVHTGRKPFKCETCTKGFSESSRLQAHQRIHEEGRPYKCDQCGKGFSGYS 788

Query: 220 ALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTKALVRH 279
           +L  H R+HTG++PY CE+CGKGF+Q+  L  H+R HTGE PY C+ C + F   + +  
Sbjct: 789 SLQAHHRVHTGEKPYKCEVCGKGFSQRSNLQAHQRVHTGEKPYTCDACGKGFRWSSGLLI 848

Query: 280 HVRSHHSS 287
           H R+H S 
Sbjct: 849 HQRAHSSD 856

May be involved in transcriptional regulation.

Mus musculus (taxid: 10090)

>sp|A1YF12|ZNF16_GORGO Zinc finger protein 16 OS=Gorilla gorilla gorilla GN=ZNF16 PE=3 SV=1

 Score =  155 bits (391), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 92/246 (37%), Positives = 121/246 (49%), Gaps = 6/246 (2%)

Query: 41  DGSLACNVCSKRCGSKSGLKIHMKSHTLSKRYACSICLAEFHTLTEKDRHTLSHVVEGEY 100
           + S  C+ C K     S LK H +SH   K Y CS C   F   ++  RH   H  E  Y
Sbjct: 234 EASFMCDDCGKTFSQNSVLKNHHRSHMSEKAYQCSECGKAFRGHSDFSRHQSHHSSERPY 293

Query: 101 KCNQCDHVAKKLAYLQAHMKKHRNEYTAYCDLCQEGFFRKAKYETHNIQKHNAPPFECES 160
            CN+C     + + L+ H K H +E    C+ C + F R +    H        P+ C  
Sbjct: 294 MCNECGKAFSQNSSLKKHQKSHMSEKPYECNECGKAFRRSSNLIQHQRIHSGEKPYVCSE 353

Query: 161 CKKIFTYHKNT-----THLGIK-FECEVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKG 214
           C K F    N      TH G K FEC  C +  S   HLR H R HT E+P  C+ CGK 
Sbjct: 354 CGKAFRRSSNLIKHHRTHTGEKPFECGECGKAFSQSAHLRKHQRVHTGEKPYECNDCGKP 413

Query: 215 FRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTK 274
           F R   L +H R+HTG++PY C  CGK F+Q  +L  H+R HTGE P+ C  C + FS  
Sbjct: 414 FSRVSNLIKHHRVHTGEKPYKCSDCGKAFSQSSSLIQHRRIHTGEKPHVCNICGKAFSYS 473

Query: 275 ALVRHH 280
           +++R H
Sbjct: 474 SVLRKH 479

May be involved in transcriptional regulation.

Gorilla gorilla gorilla (taxid: 9595)

>sp|Q5R5U3|ZN271_PONAB Zinc finger protein 271 OS=Pongo abelii GN=ZNF271 PE=2 SV=1

 Score =  154 bits (389), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 88/245 (35%), Positives = 121/245 (49%), Gaps = 6/245 (2%)

Query: 46  CNVCSKRCGSKSGLKIHMKSHTLSKRYACSICLAEFHTLTEKDRHTLSHVVEGEYKCNQC 105
           C+VC+K     S L +H + HT  K Y C+ C   F   ++  +H   H  E  YKCN+C
Sbjct: 249 CDVCAKAFSQSSDLILHQRIHTGEKPYPCNQCSKSFSQNSDLIKHRRIHTGEKPYKCNEC 308

Query: 106 DHVAKKLAYLQAHMKKHRNEYTAYCDLCQEGFFRKAKYETHNIQKHNAPPFECESCKKIF 165
                + + L  H + H  E    CD C + F R +    H        P+ C  C K+F
Sbjct: 309 GKAFNQSSVLILHQRIHTGEKPYPCDQCSKTFSRLSDLINHQRIHTGEKPYPCNQCNKMF 368

Query: 166 TYHKNTT-----HLGIK-FECEVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGD 219
           +   +       H G K +EC+ C +  S  ++L LH R HT E+P  CS C K F R  
Sbjct: 369 SRRSDLVKHHRIHTGEKPYECDECGKTFSQSSNLILHQRIHTGEKPYPCSDCTKSFSRRS 428

Query: 220 ALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTKALVRH 279
            L +H RIHTG++PY C  C K F+Q   L  H+R H+GE PYHC  C + FS  + +  
Sbjct: 429 DLVKHQRIHTGEKPYACNQCDKSFSQSSDLTKHQRVHSGEKPYHCNSCEKAFSQSSDLIL 488

Query: 280 HVRSH 284
           H R H
Sbjct: 489 HQRIH 493

May be involved in transcriptional regulation.

Pongo abelii (taxid: 9601)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	306
402904356	503	PREDICTED: zinc finger protein 878-like	0.781	0.475	0.4	5e-43
355755487	477	hypothetical protein EGM_09298, partial	0.781	0.501	0.4	9e-43
355703173	578	hypothetical protein EGK_10148 [Macaca m	0.781	0.413	0.395	3e-42
426387313	531	PREDICTED: zinc finger protein 878 [Gori	0.781	0.450	0.395	6e-42
332634996	531	zinc finger protein 878 [Homo sapiens] g	0.781	0.450	0.395	1e-41
441628330	503	PREDICTED: zinc finger protein 878 [Noma	0.781	0.475	0.4	1e-41
397485309	1055	PREDICTED: zinc finger protein 878-like	0.781	0.226	0.395	1e-41
405950372	592	Histone-lysine N-methyltransferase PRDM9	0.787	0.407	0.372	2e-41
390478614	1748	PREDICTED: LOW QUALITY PROTEIN: zinc fin	0.781	0.136	0.387	2e-41
410053259	503	PREDICTED: zinc finger protein 878 [Pan	0.781	0.475	0.395	4e-41

>gi|402904356|ref|XP_003915012.1| PREDICTED: zinc finger protein 878-like [Papio anubis]

 Score =  181 bits (458), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 98/245 (40%), Positives = 132/245 (53%), Gaps = 6/245 (2%)

Query: 46  CNVCSKRCGSKSGLKIHMKSHTLSKRYACSICLAEFHTLTEKDRHTLSHVVEGEYKCNQC 105
           CN+C K   S S LK H KSHT  KRY C+ C   F+ L+    H  +H  E  Y+C QC
Sbjct: 201 CNICGKAFFSPSSLKRHEKSHTGEKRYKCTQCGKAFNCLSSFQYHERTHSGEKPYECTQC 260

Query: 106 DHVAKKLAYLQAHMKKHRNEYTAYCDLCQEGFFRKAKYETHNIQKHNAPPFECESCKKIF 165
               + + YL+ H +KH  E    C LC +GF     +  H        P+EC+ C+K F
Sbjct: 261 RKAFRSVKYLRVHERKHTGEKPYECKLCGKGFISSTSFRYHEKTHTGEKPYECKKCEKAF 320

Query: 166 TYHKNT-----THLGIK-FECEVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGD 219
           ++ K+      TH G K FEC+ C +  ++ N    H RTHT E+P  C  CGK FR   
Sbjct: 321 SFVKDLRIHERTHTGEKPFECKRCGKTFTSSNSFHYHERTHTGEKPYECEQCGKAFRSAS 380

Query: 220 ALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTKALVRH 279
            L +HIR HTG++PY C+ CGK F     L  H+R HTGE PY C+ C + F +   +R+
Sbjct: 381 ILQKHIRTHTGEKPYGCKQCGKAFRVASQLKMHERTHTGEKPYECKQCGKAFISSNSIRY 440

Query: 280 HVRSH 284
           H R+H
Sbjct: 441 HKRTH 445

Source: Papio anubis

Species: Papio anubis

Genus: Papio

Family: Cercopithecidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|355755487|gb|EHH59234.1| hypothetical protein EGM_09298, partial [Macaca fascicularis]

 Score =  180 bits (456), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 98/245 (40%), Positives = 131/245 (53%), Gaps = 6/245 (2%)

Query: 46  CNVCSKRCGSKSGLKIHMKSHTLSKRYACSICLAEFHTLTEKDRHTLSHVVEGEYKCNQC 105
           CN+C K   S S LK H KSHT  KRY C+ C   F+  +    H  +H  E  Y+C QC
Sbjct: 200 CNICGKAFFSPSSLKRHEKSHTGEKRYKCTQCGKAFNCPSSFQYHERTHSGEKPYECTQC 259

Query: 106 DHVAKKLAYLQAHMKKHRNEYTAYCDLCQEGFFRKAKYETHNIQKHNAPPFECESCKKIF 165
               + + YL+ H +KH  E    C LC +GF     +  H        P+ECE C+K F
Sbjct: 260 RKAFRSVKYLRVHERKHTGEKPYECKLCGKGFISSTSFRYHEKTHTGEKPYECEKCEKAF 319

Query: 166 TYHKNT-----THLGIK-FECEVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGD 219
           ++ K+      TH G K FEC+ C +  ++ N    H RTHT E+P  C  CGK FR   
Sbjct: 320 SFVKDLRIHERTHTGEKPFECKRCGKTFTSSNSFHYHERTHTGEKPYECEQCGKAFRSAS 379

Query: 220 ALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTKALVRH 279
            L +HIR HTG++PY C+ CGK F     L  H+R HTGE PY C+ C + F +   +R+
Sbjct: 380 ILQKHIRTHTGEKPYGCKQCGKAFRVASQLKMHERTHTGEKPYECKQCGKAFISSNSIRY 439

Query: 280 HVRSH 284
           H R+H
Sbjct: 440 HKRTH 444

Source: Macaca fascicularis

Species: Macaca fascicularis

Genus: Macaca

Family: Cercopithecidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|355703173|gb|EHH29664.1| hypothetical protein EGK_10148 [Macaca mulatta]

 Score =  178 bits (452), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 97/245 (39%), Positives = 131/245 (53%), Gaps = 6/245 (2%)

Query: 46  CNVCSKRCGSKSGLKIHMKSHTLSKRYACSICLAEFHTLTEKDRHTLSHVVEGEYKCNQC 105
           CN+C K   S S LK H KSHT  KRY C+ C   F+  +    H  +H  E  Y+C QC
Sbjct: 276 CNICGKAFFSPSSLKRHEKSHTGEKRYKCTQCGKAFNCPSSFQYHERTHSGEKPYECTQC 335

Query: 106 DHVAKKLAYLQAHMKKHRNEYTAYCDLCQEGFFRKAKYETHNIQKHNAPPFECESCKKIF 165
               + + YL+ H +KH  E    C LC +GF     +  H        P+EC+ C+K F
Sbjct: 336 RKAFRSVKYLRVHERKHTGEKPYECKLCGKGFISSTSFRYHEKTHTGEKPYECKKCEKAF 395

Query: 166 TYHKNT-----THLGIK-FECEVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGD 219
           ++ K+      TH G K FEC+ C +  ++ N    H RTHT E+P  C  CGK FR   
Sbjct: 396 SFVKDLRIHERTHTGEKPFECKRCGKTFTSSNSFHYHERTHTGEKPYECEQCGKAFRSAS 455

Query: 220 ALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTKALVRH 279
            L +HIR HTG++PY C+ CGK F     L  H+R HTGE PY C+ C + F +   +R+
Sbjct: 456 ILQKHIRTHTGEKPYGCKQCGKAFRVASQLKMHERTHTGEKPYECKQCGKAFISSNSIRY 515

Query: 280 HVRSH 284
           H R+H
Sbjct: 516 HKRTH 520

Source: Macaca mulatta

Species: Macaca mulatta

Genus: Macaca

Family: Cercopithecidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|426387313|ref|XP_004060115.1| PREDICTED: zinc finger protein 878 [Gorilla gorilla gorilla]

 Score =  177 bits (449), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 97/245 (39%), Positives = 130/245 (53%), Gaps = 6/245 (2%)

Query: 46  CNVCSKRCGSKSGLKIHMKSHTLSKRYACSICLAEFHTLTEKDRHTLSHVVEGEYKCNQC 105
           CN+C K   S S LK H KSHT  KRY C  C   F+  +    H  +H  E  Y+C QC
Sbjct: 229 CNICGKAFFSPSSLKRHEKSHTGEKRYKCKQCDKAFNCPSSFQYHERTHSGEKPYECTQC 288

Query: 106 DHVAKKLAYLQAHMKKHRNEYTAYCDLCQEGFFRKAKYETHNIQKHNAPPFECESCKKIF 165
               + + YL+ H +KH  E    C LC +GF     +  H        P+EC+ C+K F
Sbjct: 289 RKAFRSVKYLRVHERKHTGEKPYECKLCGKGFISSTSFRYHEKTHTGEKPYECKKCEKAF 348

Query: 166 TYHKNT-----THLGIK-FECEVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGD 219
           ++ K+      TH G K FEC+ C +  ++ N    H RTHT E+P  C  CGK FR   
Sbjct: 349 SFVKDLRIHERTHTGEKPFECKQCGKTFTSSNSFHYHERTHTGEKPYECKQCGKAFRSAS 408

Query: 220 ALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTKALVRH 279
            L +HIR HTG++PY C+ CGK F     L  H+R HTGE PY C+ C + F +   +R+
Sbjct: 409 VLQKHIRTHTGEKPYGCKQCGKVFRVASQLKMHERTHTGEKPYECKQCGKAFISSNSIRY 468

Query: 280 HVRSH 284
           H R+H
Sbjct: 469 HKRTH 473

Source: Gorilla gorilla gorilla

Species: Gorilla gorilla

Genus: Gorilla

Family: Hominidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|332634996|ref|NP_001073873.2| zinc finger protein 878 [Homo sapiens] gi|325511372|sp|C9JN71.2|ZN878_HUMAN RecName: Full=Zinc finger protein 878

 Score =  176 bits (446), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 97/245 (39%), Positives = 129/245 (52%), Gaps = 6/245 (2%)

Query: 46  CNVCSKRCGSKSGLKIHMKSHTLSKRYACSICLAEFHTLTEKDRHTLSHVVEGEYKCNQC 105
           CN+C K   S S LK H KSHT  KRY C  C   F+  +    H  +H  E  Y+C QC
Sbjct: 229 CNICGKAFFSPSSLKRHEKSHTGEKRYKCKQCDKAFNCPSSFQYHERTHSGEKPYECTQC 288

Query: 106 DHVAKKLAYLQAHMKKHRNEYTAYCDLCQEGFFRKAKYETHNIQKHNAPPFECESCKKIF 165
               + + YL+ H +KH  E    C LC +GF     +  H        P+EC+ C K F
Sbjct: 289 RKAFRSVKYLRVHERKHTGEKPYECKLCGKGFISSTSFRYHEKTHTGEKPYECKKCVKAF 348

Query: 166 TYHKNT-----THLGIK-FECEVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGD 219
           ++ K+      TH G K FEC+ C +  ++ N    H RTHT E+P  C  CGK FR   
Sbjct: 349 SFVKDLRIHERTHTGEKPFECKQCGKTFTSSNSFHYHERTHTGEKPYECKQCGKAFRSAS 408

Query: 220 ALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTKALVRH 279
            L +HIR HTG++PY C+ CGK F     L  H+R HTGE PY C+ C + F +   +R+
Sbjct: 409 VLQKHIRTHTGEKPYGCKQCGKVFRVASQLKMHERTHTGEKPYECKQCGKAFISSNSIRY 468

Query: 280 HVRSH 284
           H R+H
Sbjct: 469 HKRTH 473

Source: Homo sapiens

Species: Homo sapiens

Genus: Homo

Family: Hominidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|441628330|ref|XP_003275706.2| PREDICTED: zinc finger protein 878 [Nomascus leucogenys]

 Score =  176 bits (446), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 98/245 (40%), Positives = 130/245 (53%), Gaps = 6/245 (2%)

Query: 46  CNVCSKRCGSKSGLKIHMKSHTLSKRYACSICLAEFHTLTEKDRHTLSHVVEGEYKCNQC 105
           CNVC K   S S LK H KSHT  KRY C  C   F+  +    H  +H  E  Y+C QC
Sbjct: 201 CNVCGKAFFSPSSLKRHEKSHTGEKRYKCKQCGKAFNCPSSFQYHERTHSGEKPYECTQC 260

Query: 106 DHVAKKLAYLQAHMKKHRNEYTAYCDLCQEGFFRKAKYETHNIQKHNAPPFECESCKKIF 165
               + + YL+ H +KH  E    C LC +GF     +  H        P+EC+ C+K F
Sbjct: 261 RKAFRSVKYLRVHERKHTGEKPYECKLCGKGFISSTSFRYHEKTHTGEKPYECKKCEKAF 320

Query: 166 TYHKNT-----THLGIK-FECEVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGD 219
           ++ K+      TH G K FEC+ C +  ++ N    H RTHT E+P  C  CGK FR   
Sbjct: 321 SFVKDLRIHERTHTGEKPFECKQCGKTFTSSNSFHYHERTHTGEKPYECKQCGKAFRSVS 380

Query: 220 ALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTKALVRH 279
            L +HIR HTG++PY C+ CGK F     L  H+R HTGE PY C+ C + F +   +R+
Sbjct: 381 ILQKHIRTHTGEKPYGCKQCGKVFRVASQLKMHERTHTGEKPYECKQCGKAFISSNSIRY 440

Query: 280 HVRSH 284
           H R+H
Sbjct: 441 HKRTH 445

Source: Nomascus leucogenys

Species: Nomascus leucogenys

Genus: Nomascus

Family: Hylobatidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|397485309|ref|XP_003813795.1| PREDICTED: zinc finger protein 878-like [Pan paniscus]

 Score =  176 bits (445), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 97/245 (39%), Positives = 130/245 (53%), Gaps = 6/245 (2%)

Query: 46  CNVCSKRCGSKSGLKIHMKSHTLSKRYACSICLAEFHTLTEKDRHTLSHVVEGEYKCNQC 105
           CN+C K   S S LK H KSHT  KRY C  C   F+  +    H  +H  E  Y+C QC
Sbjct: 302 CNICGKAFFSPSSLKRHEKSHTGEKRYKCKQCDKAFNCPSSFQYHERTHSGEKPYECTQC 361

Query: 106 DHVAKKLAYLQAHMKKHRNEYTAYCDLCQEGFFRKAKYETHNIQKHNAPPFECESCKKIF 165
               + + YL+ H +KH  E    C LC +GF     +  H        P+EC+ C+K F
Sbjct: 362 RKAFRSVKYLRVHERKHTGEKPYECKLCGKGFISSTSFRYHEKTHTGEKPYECKKCEKAF 421

Query: 166 TYHKNT-----THLGIK-FECEVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGD 219
           ++ K+      TH G K FEC+ C +  ++ N    H RTHT E+P  C  CGK FR   
Sbjct: 422 SFVKDLQIHERTHTGEKPFECKQCGKTFTSSNSFHYHERTHTGEKPYECKQCGKAFRSAS 481

Query: 220 ALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTKALVRH 279
            L +HIR HTG++PY C+ CGK F     L  H+R HTGE PY C+ C + F +   +R+
Sbjct: 482 ILQKHIRTHTGEKPYGCKQCGKVFRVASQLKMHERTHTGEKPYECKQCGKAFISSNSIRY 541

Query: 280 HVRSH 284
           H R+H
Sbjct: 542 HKRTH 546

Source: Pan paniscus

Species: Pan paniscus

Genus: Pan

Family: Hominidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|405950372|gb|EKC18365.1| Histone-lysine N-methyltransferase PRDM9 [Crassostrea gigas]

 Score =  175 bits (444), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 92/247 (37%), Positives = 129/247 (52%), Gaps = 6/247 (2%)

Query: 46  CNVCSKRCGSKSGLKIHMKSHTLSKRYACSICLAEFHTLTEKDRHTLSHVVEGEYKCNQC 105
           C++C K       L+ HM++HT  K Y C++C   F+       H   H  E  YKCN C
Sbjct: 346 CDLCGKSFNLSQHLQKHMRTHTGEKPYKCNVCGKAFNQSQNLQTHMRIHTGEKPYKCNVC 405

Query: 106 DHVAKKLAYLQAHMKKHRNEYTAYCDLCQEGFFRKAKYETHNIQKHNAPPFECESCKKIF 165
                +   LQAHM+ H  E    CD+C + F      + H        P++C+ C K F
Sbjct: 406 GKAFNQSQNLQAHMRTHTGEKPYKCDVCGKAFTESGSLQKHMRTHTGEKPYKCDVCGKAF 465

Query: 166 TYHKNT-----THLGIK-FECEVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGD 219
               +       H G K ++C++C +  +   HL+ HMRTHT E+P  C  CGK F +  
Sbjct: 466 NQSADLQKHMRIHTGEKPYKCDMCGKAFNQIPHLQTHMRTHTGEKPYKCDVCGKAFNQSA 525

Query: 220 ALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTKALVRH 279
            L +H+RIHTG++PY C +CGK F Q Q+L  HKR HTGE PY C+ C + FS  +  R 
Sbjct: 526 DLQKHMRIHTGEKPYKCNMCGKAFNQSQSLQAHKRTHTGEKPYKCDVCGKAFSDPSHYRS 585

Query: 280 HVRSHHS 286
           H +SH +
Sbjct: 586 HKKSHEA 592

Source: Crassostrea gigas

Species: Crassostrea gigas

Genus: Crassostrea

Family: Ostreidae

Order: Ostreoida

Class: Bivalvia

Phylum: Mollusca

Superkingdom: Eukaryota

>gi|390478614|ref|XP_002807853.2| PREDICTED: LOW QUALITY PROTEIN: zinc finger protein 729 [Callithrix jacchus]

 Score =  175 bits (443), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 95/245 (38%), Positives = 131/245 (53%), Gaps = 6/245 (2%)

Query: 46   CNVCSKRCGSKSGLKIHMKSHTLSKRYACSICLAEFHTLTEKDRHTLSHVVEGEYKCNQC 105
            CN+C K   S S LK H K+HT  KRY C  C   F+  +    H  +H  E  Y+C QC
Sbjct: 1046 CNICGKAFFSPSSLKRHEKTHTEEKRYKCKQCGKAFNCPSSFQYHERTHSGEKPYECKQC 1105

Query: 106  DHVAKKLAYLQAHMKKHRNEYTAYCDLCQEGFFRKAKYETHNIQKHNAPPFECESCKKIF 165
                + + YL+ H +KH  E    C LC + F     +  H        P++C+ C+K F
Sbjct: 1106 GKAFRSVKYLRVHERKHTGEKPYECKLCGKAFISSTSFRYHEKTHTGERPYKCKKCEKAF 1165

Query: 166  TYHKNT-----THLGIK-FECEVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGD 219
            +Y K+      TH G K +EC+ C +  ++ N    H RTHT E+P  C +CGK FR   
Sbjct: 1166 SYVKDLRVHERTHTGEKPYECKQCKKTFTSSNSFHYHQRTHTGEKPYECKHCGKAFRSAS 1225

Query: 220  ALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTKALVRH 279
             L +HIR HTG++PY C+ CGK FT    L  H+R HTGE PY C+ C + F +   +R+
Sbjct: 1226 ILQKHIRTHTGEKPYGCKQCGKVFTVASQLKMHERTHTGEKPYECKQCGKAFISSNSIRY 1285

Query: 280  HVRSH 284
            H R+H
Sbjct: 1286 HKRTH 1290

Source: Callithrix jacchus

Species: Callithrix jacchus

Genus: Callithrix

Family: Cebidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|410053259|ref|XP_003953422.1| PREDICTED: zinc finger protein 878 [Pan troglodytes]

 Score =  174 bits (442), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 97/245 (39%), Positives = 130/245 (53%), Gaps = 6/245 (2%)

Query: 46  CNVCSKRCGSKSGLKIHMKSHTLSKRYACSICLAEFHTLTEKDRHTLSHVVEGEYKCNQC 105
           CN+C K   S S LK H KSHT  KRY C  C   F+  +    H  +H  E  Y+C QC
Sbjct: 201 CNICGKAFFSPSSLKRHEKSHTGEKRYKCKQCDKAFNCPSSFQYHERTHSGEKPYECTQC 260

Query: 106 DHVAKKLAYLQAHMKKHRNEYTAYCDLCQEGFFRKAKYETHNIQKHNAPPFECESCKKIF 165
               + + YL+ H +KH  E    C LC +GF     +  H        P+EC+ C+K F
Sbjct: 261 RKAFRSVKYLRVHERKHTGEKPYECKLCGKGFISSTSFCYHEKTHTGEKPYECKKCEKAF 320

Query: 166 TYHKNT-----THLGIK-FECEVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGD 219
           ++ K+      TH G K FEC+ C +  ++ N    H RTHT E+P  C  CGK FR   
Sbjct: 321 SFVKDLQIHERTHTGEKPFECKQCGKTFTSSNSFHYHERTHTGEKPYECKQCGKAFRSAS 380

Query: 220 ALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTKALVRH 279
            L +HIR HTG++PY C+ CGK F     L  H+R HTGE PY C+ C + F +   +R+
Sbjct: 381 ILQKHIRTHTGEKPYGCKQCGKVFRVASQLKMHERTHTGEKPYECKRCGKAFISSNSIRY 440

Query: 280 HVRSH 284
           H R+H
Sbjct: 441 HKRTH 445

Source: Pan troglodytes

Species: Pan troglodytes

Genus: Pan

Family: Hominidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	306
UNIPROTKB|C9JN71	531	ZNF878 "Zinc finger protein 87	0.738	0.425	0.400	8.8e-47
UNIPROTKB|Q0VGE8	651	ZNF816 "Zinc finger protein 81	0.748	0.351	0.378	8.1e-44
ZFIN|ZDB-GENE-110913-94	419	si:dkey-199m13.3 "si:dkey-199m	0.826	0.603	0.357	1.3e-43
RGD|2293498	455	Zfp9 "zinc finger protein 9" [	0.882	0.593	0.35	1.3e-43
UNIPROTKB|B1AKS7	420	ZNF25 "Zinc finger protein 25"	0.862	0.628	0.346	1.7e-43
UNIPROTKB|P17030	456	ZNF25 "Zinc finger protein 25"	0.862	0.578	0.346	1.7e-43
UNIPROTKB|F1LNE0	454	Zfp9 "Protein Zfp9" [Rattus no	0.879	0.592	0.35	2.2e-43
UNIPROTKB|A4IFL9	641	LOC100125304 "LOC100125304 pro	0.748	0.357	0.395	2.8e-43
UNIPROTKB|F1P9J6	633	ZNF16 "Uncharacterized protein	0.751	0.363	0.381	9.3e-43
ZFIN|ZDB-GENE-110913-27	419	si:ch211-241n15.2 "si:ch211-24	0.745	0.544	0.372	9.3e-43

UNIPROTKB|C9JN71 ZNF878 "Zinc finger protein 878" [Homo sapiens (taxid:9606)]

 Score = 490 (177.5 bits), Expect = 8.8e-47, P = 8.8e-47
 Identities = 93/232 (40%), Positives = 121/232 (52%)

Query:    46 CNVCSKRCGSKSGLKIHMKSHTLSKRYACSICLAEFHTLTEKDRHTLSHVVEGEYKCNQC 105
             CN+C K   S S LK H KSHT  KRY C  C   F+  +    H  +H  E  Y+C QC
Sbjct:   229 CNICGKAFFSPSSLKRHEKSHTGEKRYKCKQCDKAFNCPSSFQYHERTHSGEKPYECTQC 288

Query:   106 DHVAKKLAYLQAHMKKHRNEYTAYCDLCQEGFFRKAKYETHNIQKHNAPPFECESCKKIF 165
                 + + YL+ H +KH  E    C LC +GF     +  H        P+EC+ C K F
Sbjct:   289 RKAFRSVKYLRVHERKHTGEKPYECKLCGKGFISSTSFRYHEKTHTGEKPYECKKCVKAF 348

Query:   166 TYHKNT-----THLGIK-FECEVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGD 219
             ++ K+      TH G K FEC+ C +  ++ N    H RTHT E+P  C  CGK FR   
Sbjct:   349 SFVKDLRIHERTHTGEKPFECKQCGKTFTSSNSFHYHERTHTGEKPYECKQCGKAFRSAS 408

Query:   220 ALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERF 271
              L +HIR HTG++PY C+ CGK F     L  H+R HTGE PY C+ C + F
Sbjct:   409 VLQKHIRTHTGEKPYGCKQCGKVFRVASQLKMHERTHTGEKPYECKQCGKAF 460

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|Q0VGE8 ZNF816 "Zinc finger protein 816" [Homo sapiens (taxid:9606)]

 Score = 462 (167.7 bits), Expect = 8.1e-44, P = 8.1e-44
 Identities = 89/235 (37%), Positives = 116/235 (49%)

Query:    46 CNVCSKRCGSKSGLKIHMKSHTLSKRYACSICLAEFHTLTEKDRHTLSHVVEGEYKCNQC 105
             CN C K    KS L+ H   HT  K Y C  C   +   +  +RH   H  EG YKC  C
Sbjct:   371 CNECGKTFSQKSSLQCHHILHTGEKPYKCEECDNVYIRRSHLERHRKIHTGEGSYKCKVC 430

Query:   106 DHVAKKLAYLQAHMKKHRNEYTAYCDLCQEGFFRKAKYETHNIQKHNAPPFECESCKKIF 165
             D V +  +YL  H + H  E    C+ C   F RK+  + H+       P+ C  C K+F
Sbjct:   431 DKVFRSDSYLAEHQRVHTGEKPYKCNKCGRSFSRKSSLQYHHTLHTGEKPYTCNECGKVF 490

Query:   166 TYHKNTT-----HLGIK-FECEVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGD 219
             +  +N       H G K ++CE C +  S ++HL  H R HT E+P  C  C K FR   
Sbjct:   491 SRRENLARHHRLHAGEKPYKCEECDKVFSRRSHLERHRRIHTGEKPYKCKVCDKAFRSDS 550

Query:   220 ALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTK 274
              L  H R+HTG++PY C  C K F QK  L  H+R HTGE PY C  C + F+ K
Sbjct:   551 CLANHTRVHTGEKPYKCNKCAKVFNQKGILAQHQRVHTGEKPYKCNECGKVFNQK 605

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

ZFIN|ZDB-GENE-110913-94 si:dkey-199m13.3 "si:dkey-199m13.3" [Danio rerio (taxid:7955)]

 Score = 460 (167.0 bits), Expect = 1.3e-43, P = 1.3e-43
 Identities = 94/263 (35%), Positives = 125/263 (47%)

Query:    19 SRKKRGHEKTLPRAKKCREVEQDGSLACNVCSKRCGSKSGLKIHMKSHTLSKRYACSICL 78
             SRK    +  L    +    EQ     C  C K  G K   K HM+ HT  + Y C +C 
Sbjct:    86 SRKSFSQKSNLDVHMRVHTREQP--FTCEQCGKSFGQKQSFKAHMRIHTRERLYTCQLCG 143

Query:    79 AEFHTLTEKDRHTLSHVVEGEYKCNQCDHVAKKLAYLQAHMKKHRNEYTAYCDLCQEGFF 138
               F+       H   H  E  + C QC     +   L  HM+ H  E    C+ C + F 
Sbjct:   144 KSFYHAGHFAAHMRIHTGEKPFSCKQCGKSFSQKPNLDVHMRVHTGEKPYTCEQCGKSFS 203

Query:   139 RKAKYETHNIQKHNAP-PFECESCKKIFTYHKNT-----THLGIK-FECEVCHRKLSTKN 191
             +K  ++ H ++ H    P+ C+ C K F + +N      TH G K F C+ C +  STK 
Sbjct:   204 QKRSFKAH-MRIHTGERPYTCQQCGKSFCHARNLEVHMRTHTGEKPFSCKQCRKNFSTKL 262

Query:   192 HLRLHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNT 251
             +L  HMR HT E+P  C  CGK   +   L  H+RIHTG++PY C  CGK F  K  LN 
Sbjct:   263 NLIAHMRVHTREKPYTCEQCGKSLGKKQDLYIHMRIHTGEKPYTCTECGKSFPHKNTLNH 322

Query:   252 HKRGHTGEIPYHCEFCSERFSTK 274
             H R HTGE P+ C  C + F+TK
Sbjct:   323 HMRTHTGEKPFVCAQCGKSFTTK 345

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

RGD|2293498 Zfp9 "zinc finger protein 9" [Rattus norvegicus (taxid:10116)]

 Score = 460 (167.0 bits), Expect = 1.3e-43, P = 1.3e-43
 Identities = 98/280 (35%), Positives = 135/280 (48%)

Query:     2 CPYKKPSLHQVSFRFYASRKKRGHEKTLPRAKKCREVEQDGSLACNVCSKRCGSKSGLKI 61
             C  K+ ++H    R    +     +K    AK+ +   +  S  C+ C K    KS L  
Sbjct:    77 CGDKRRTVHDPKARHQEQQAGTARQKR-ELAKRQKTPTRHESYDCSKCGKSFCQKSSLLA 135

Query:    62 HMKSHTLSKRYACSICLAEFHTLTEKDRHTLSHVVEGEYKCNQCDHVAKKLAYLQAHMKK 121
             H ++HT  K Y C  C   F+   +   H   H  +  Y C +C+ +   L+ L  H++ 
Sbjct:   136 HQETHT-KKSYKCDKCGQAFYKNEDLSIHQKVHTRDKTYPCKECNKIFYHLSSLTRHLRI 194

Query:   122 HRNEYTAYCDLCQEGFFRKAKYETHNIQKHNAPPFECESCKKIF---TY---HKNTTHLG 175
             H  E    C  C++ F++K     H        PFEC+ C K F    Y   H+ T H G
Sbjct:   195 HAGEKPYECSQCEKSFYQKPHLTEHQKTHTGEKPFECKECGKFFYVKAYLLVHQKT-HTG 253

Query:   176 IK-FECEVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPY 234
              K FEC+ C +  S K+HL +H RTHT E+P  C  CGK F R   L  H R HTG++PY
Sbjct:   254 EKPFECKECGKFFSQKSHLTVHQRTHTGEKPYKCKECGKLFSRNSHLITHQRTHTGEKPY 313

Query:   235 VCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTK 274
              C+ CG  F QK AL  H+R HTGE P+ C  C + F  K
Sbjct:   314 KCKECGNRFYQKSALTVHQRTHTGEKPFECSKCGKHFYYK 353

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|B1AKS7 ZNF25 "Zinc finger protein 25" [Homo sapiens (taxid:9606)]

 Score = 459 (166.6 bits), Expect = 1.7e-43, P = 1.7e-43
 Identities = 95/274 (34%), Positives = 132/274 (48%)

Query:     8 SLHQVSFRFYASRKKRGHEKTLPRAKKCREVEQDGSLACNVCSKRCGSKSGLKIHMKSHT 67
             S+H +  R+  S+        L + +K    E+  +  C  C K    KS L +H  +H+
Sbjct:    48 SIHDLEARYQESQAGNSRNGELTKHQKTHTTEK--ACECKECGKFFCQKSALIVHQHTHS 105

Query:    68 LSKRYACSICLAEFHTLTEKDRHTLSHVVEGEYKCNQCDHVAKKLAYLQAHMKKHRNEYT 127
               K Y C  C   F    +  RH   H  +  Y+C +C  +   L+ L  H++ H  E  
Sbjct:   106 KGKSYDCDKCGKSFSKNEDLIRHQKIHTRDKTYECKECKKIFYHLSSLSRHLRTHAGEKP 165

Query:   128 AYCDLCQEGFFRKAKYETHNIQKHNAPPFECESCKKIF---TY---HKNTTHLGIK-FEC 180
               C+ C++ F++K     H        PFEC  C K F    Y   H+ T H G K +EC
Sbjct:   166 YECNQCEKSFYQKPHLTEHQKTHTGEKPFECTECGKFFYVKAYLMVHQKT-HTGEKPYEC 224

Query:   181 EVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEICG 240
             + C +  S K+HL +H R HT E+P  C  CGK F R   L  H R HTG++PY C+ C 
Sbjct:   225 KECGKAFSQKSHLTVHQRMHTGEKPYKCKECGKFFSRNSHLKTHQRSHTGEKPYECKECR 284

Query:   241 KGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTK 274
             K F QK AL  H+R HTGE P+ C  C + F  K
Sbjct:   285 KCFYQKSALTVHQRTHTGEKPFECNKCGKTFYYK 318

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|P17030 ZNF25 "Zinc finger protein 25" [Homo sapiens (taxid:9606)]

 Score = 459 (166.6 bits), Expect = 1.7e-43, P = 1.7e-43
 Identities = 95/274 (34%), Positives = 132/274 (48%)

Query:     8 SLHQVSFRFYASRKKRGHEKTLPRAKKCREVEQDGSLACNVCSKRCGSKSGLKIHMKSHT 67
             S+H +  R+  S+        L + +K    E+  +  C  C K    KS L +H  +H+
Sbjct:    84 SIHDLEARYQESQAGNSRNGELTKHQKTHTTEK--ACECKECGKFFCQKSALIVHQHTHS 141

Query:    68 LSKRYACSICLAEFHTLTEKDRHTLSHVVEGEYKCNQCDHVAKKLAYLQAHMKKHRNEYT 127
               K Y C  C   F    +  RH   H  +  Y+C +C  +   L+ L  H++ H  E  
Sbjct:   142 KGKSYDCDKCGKSFSKNEDLIRHQKIHTRDKTYECKECKKIFYHLSSLSRHLRTHAGEKP 201

Query:   128 AYCDLCQEGFFRKAKYETHNIQKHNAPPFECESCKKIF---TY---HKNTTHLGIK-FEC 180
               C+ C++ F++K     H        PFEC  C K F    Y   H+ T H G K +EC
Sbjct:   202 YECNQCEKSFYQKPHLTEHQKTHTGEKPFECTECGKFFYVKAYLMVHQKT-HTGEKPYEC 260

Query:   181 EVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEICG 240
             + C +  S K+HL +H R HT E+P  C  CGK F R   L  H R HTG++PY C+ C 
Sbjct:   261 KECGKAFSQKSHLTVHQRMHTGEKPYKCKECGKFFSRNSHLKTHQRSHTGEKPYECKECR 320

Query:   241 KGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTK 274
             K F QK AL  H+R HTGE P+ C  C + F  K
Sbjct:   321 KCFYQKSALTVHQRTHTGEKPFECNKCGKTFYYK 354

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|F1LNE0 Zfp9 "Protein Zfp9" [Rattus norvegicus (taxid:10116)]

 Score = 458 (166.3 bits), Expect = 2.2e-43, P = 2.2e-43
 Identities = 98/280 (35%), Positives = 136/280 (48%)

Query:     2 CPYKKPSLHQVSFRFYASRKKRGHEKTLPRAKKCREVEQDGSLACNVCSKRCGSKSGLKI 61
             C  K+ ++H    R     ++ G  +    AK+ +   +  S  C+ C K    KS L  
Sbjct:    77 CGDKRRTVHDPKARH--QEQQAGTARKGELAKRQKTPTRHESYDCSKCGKSFCQKSSLLA 134

Query:    62 HMKSHTLSKRYACSICLAEFHTLTEKDRHTLSHVVEGEYKCNQCDHVAKKLAYLQAHMKK 121
             H ++HT  K Y C  C   F+   +   H   H  +  Y C +C+ +   L+ L  H++ 
Sbjct:   135 HQETHT-KKSYKCDKCGQAFYKNEDLSIHQKVHTRDKTYPCKECNKIFYHLSSLTRHLRI 193

Query:   122 HRNEYTAYCDLCQEGFFRKAKYETHNIQKHNAPPFECESCKKIF---TY---HKNTTHLG 175
             H  E    C  C++ F++K     H        PFEC+ C K F    Y   H+ T H G
Sbjct:   194 HAGEKPYECSQCEKSFYQKPHLTEHQKTHTGEKPFECKECGKFFYVKAYLLVHQKT-HTG 252

Query:   176 IK-FECEVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPY 234
              K FEC+ C +  S K+HL +H RTHT E+P  C  CGK F R   L  H R HTG++PY
Sbjct:   253 EKPFECKECGKFFSQKSHLTVHQRTHTGEKPYKCKECGKLFSRNSHLITHQRTHTGEKPY 312

Query:   235 VCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTK 274
              C+ CG  F QK AL  H+R HTGE P+ C  C + F  K
Sbjct:   313 KCKECGNRFYQKSALTVHQRTHTGEKPFECSKCGKHFYYK 352

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|A4IFL9 LOC100125304 "LOC100125304 protein" [Bos taurus (taxid:9913)]

 Score = 457 (165.9 bits), Expect = 2.8e-43, P = 2.8e-43
 Identities = 93/235 (39%), Positives = 119/235 (50%)

Query:    46 CNVCSKRCGSKSGLKIHMKSHTLSKRYACSICLAEFHTLTEKDRHTLSHVVEGEYKCNQC 105
             C  C K    KS L  H + HT  K + CS+C   F   +  + H  +H+ E +Y CN+C
Sbjct:   205 CTECGKAFIKKSRLIDHQRVHTGEKPHRCSVCGKAFSRKSRLNEHQKTHIGEKQYACNEC 264

Query:   106 DHVAKKLAYLQAHMKKHRNEYTAYCDLCQEGFFRKAKYETHNIQKHNAPPFECESCKKIF 165
             D V  K + L  H K H  E    CD C +GF +K++   H        P  C  C K F
Sbjct:   265 DKVFPKKSRLLIHQKTHTGEKPYICDDCGKGFVKKSRLINHQRVHTGEKPHGCSLCDKAF 324

Query:   166 T-----YHKNTTHLGIK-FECEVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGD 219
             +          TH G K +EC  C +    K+ L  H +THT E+  +CS CGKGF +  
Sbjct:   325 SRKSRLMEHQRTHTGEKPYECTECDKAFRWKSQLNAHQKTHTGEKSYICSDCGKGFIQKG 384

Query:   220 ALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTK 274
              L  H R HTG++PYVC  CGKGF QK  L  H+R HTGE PY C  C + FS K
Sbjct:   385 NLIVHQRTHTGEKPYVCTECGKGFIQKGNLLIHQRTHTGEKPYVCTECGKGFSQK 439

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|F1P9J6 ZNF16 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 452 (164.2 bits), Expect = 9.3e-43, P = 9.3e-43
 Identities = 90/236 (38%), Positives = 116/236 (49%)

Query:    43 SLACNVCSKRCGSKSGLKIHMKSHTLSKRYACSICLAEFHTLTEKDRHTLSHVVEGEYKC 102
             S  CN C K     S LK H +SH   K Y CS C   F   +   RH ++H  E  Y C
Sbjct:   187 SFVCNECGKSFSQNSFLKNHQRSHVSEKPYQCSECRKTFSVHSNLIRHQINHSGEKPYVC 246

Query:   103 NQCDHVAKKLAYLQAHMKKHRNEYTAYCDLCQEGFFRKAKYETHNIQKHNAPPFECESCK 162
             ++C     + + L+ H K H +E    C  C + F R +    H        P+ C  C 
Sbjct:   247 SECGKAFSQNSSLKKHQKSHMSEKPYECSECGKAFRRSSNLIQHQRIHSGEKPYVCNECG 306

Query:   163 KIFTYHKNT-----THLGIK-FECEVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFR 216
             K F    N      TH G K F+C  C +  S  +HLR H R HT ERP  C+ CGK F 
Sbjct:   307 KAFRRSSNLIKHHRTHTGEKPFQCNECGKAFSQSSHLRKHQRVHTGERPYECNECGKPFS 366

Query:   217 RGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFS 272
             R   L +H R+HTG++PY C  CGK F+Q  +L  H+R HTGE P+ C  C + FS
Sbjct:   367 RVSNLIKHHRVHTGEKPYKCSDCGKAFSQSSSLIQHRRIHTGEKPHVCNVCGKAFS 422

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

ZFIN|ZDB-GENE-110913-27 si:ch211-241n15.2 "si:ch211-241n15.2" [Danio rerio (taxid:7955)]

 Score = 452 (164.2 bits), Expect = 9.3e-43, P = 9.3e-43
 Identities = 88/236 (37%), Positives = 116/236 (49%)

Query:    46 CNVCSKRCGSKSGLKIHMKSHTLSKRYACSICLAEFHTLTEKDRHTLSHVVEGEYKCNQC 105
             C  C K  G K   K HM+ HT  K Y C  C   F+       H   H  E  + C QC
Sbjct:   111 CEQCGKSFGQKQSFKAHMRIHTREKPYTCQQCEKSFYHAGHFAAHMRIHTGEKPFSCKQC 170

Query:   106 DHVAKKLAYLQAHMKKHRNEYTAYCDLCQEGFFRKAKYETHNIQKHNAP-PFECESCKKI 164
                  +   L  HM+ H  E    C+ C + F +K  ++TH ++ H    P+ C+ C K 
Sbjct:   171 GKSFSQKPNLDVHMRVHTGEKPYTCEQCGKSFSQKQSFKTH-MRIHTGERPYTCQQCGKS 229

Query:   165 FTYHKNTT-----HLGIK-FECEVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRG 218
             F + +N       H G K F C+ C +  S K +L  HMR HT E+P  C  CGK   + 
Sbjct:   230 FRHARNLDVHMRIHTGEKPFSCKQCRKSFSKKLNLIAHMRVHTREKPYTCEQCGKSLGKK 289

Query:   219 DALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTK 274
               L  H+RIHTG++PY C  CGK F  K  LN H R HTGE P+ C+ C + F+TK
Sbjct:   290 QDLYIHMRIHTGEKPYTCTECGKSFPHKNTLNHHMRTHTGEKPFTCDQCGKSFTTK 345

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	306
KOG1074|consensus	958		99.95
KOG2462|consensus	279		99.95
KOG2462|consensus	279		99.94
KOG3608|consensus	467		99.93
KOG3608|consensus	467		99.93
KOG1074|consensus	958		99.89
KOG3623|consensus	1007		99.89
KOG3623|consensus	1007		99.83
KOG3576|consensus	267		99.74
KOG3576|consensus	267		99.69
PLN03086	567	PRLI-interacting factor K; Provisional	99.29
PLN03086	567	PRLI-interacting factor K; Provisional	99.19
PHA00733	128	hypothetical protein	99.17
PHA00733	128	hypothetical protein	99.05
KOG3993|consensus	500		99.02
PHA02768	55	hypothetical protein; Provisional	98.82
PHA02768	55	hypothetical protein; Provisional	98.75
KOG3993|consensus	500		98.54
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.47
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.46
PHA00616	44	hypothetical protein	98.45
PHA00732	79	hypothetical protein	98.28
PHA00616	44	hypothetical protein	98.27
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.2
PHA00732	79	hypothetical protein	98.14
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.94
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.76
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.66
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.63
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.56
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.53
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.5
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.41
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.36
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.16
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.95
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.67
smart00355	26	ZnF_C2H2 zinc finger.	96.65
smart00355	26	ZnF_C2H2 zinc finger.	96.53
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.5
COG5236	493	Uncharacterized conserved protein, contains RING Z	96.43
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.41
COG5189	423	SFP1 Putative transcriptional repressor regulating	96.23
KOG1146|consensus	1406		96.07
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.05
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.01
PRK04860	160	hypothetical protein; Provisional	95.9
PRK04860	160	hypothetical protein; Provisional	95.89
KOG2785|consensus	390		95.59
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	95.57
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	95.53
KOG2231|consensus	669		95.32
KOG2482|consensus	423		94.64
KOG2231|consensus	669		94.63
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	94.26
KOG2785|consensus	390		94.15
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	94.02
KOG2482|consensus	423		93.92
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	93.53
COG5236	493	Uncharacterized conserved protein, contains RING Z	93.38
KOG1146|consensus	1406		92.5
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	92.27
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	92.02
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	91.99
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	91.76
KOG2893|consensus	341		91.55
COG4049	65	Uncharacterized protein containing archaeal-type C	91.18
COG5048	467	FOG: Zn-finger [General function prediction only]	90.5
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	90.11
KOG4173|consensus	253		88.94
COG4049	65	Uncharacterized protein containing archaeal-type C	87.43
KOG2893|consensus	341		86.1
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	85.82
COG5048	467	FOG: Zn-finger [General function prediction only]	85.78
KOG4173|consensus	253		85.52
cd00729	34	rubredoxin_SM Rubredoxin, Small Modular nonheme ir	85.28
PHA00626	59	hypothetical protein	83.91
PF13717	36	zinc_ribbon_4: zinc-ribbon domain	83.32
PF10571	26	UPF0547: Uncharacterised protein family UPF0547; I	83.26
PF09723	42	Zn-ribbon_8: Zinc ribbon domain; InterPro: IPR0134	82.9
PF13719	37	zinc_ribbon_5: zinc-ribbon domain	82.15
PRK14890	59	putative Zn-ribbon RNA-binding protein; Provisiona	81.51
TIGR02098	38	MJ0042_CXXC MJ0042 family finger-like domain. This	80.49
smart00834	41	CxxC_CXXC_SSSS Putative regulatory protein. CxxC_C	80.31

>KOG1074|consensus

Probab=99.95  E-value=8.5e-29  Score=221.55  Aligned_cols=191  Identities=27%  Similarity=0.528  Sum_probs=149.0

Q ss_pred             ccCCCChhhhccHHHHHHHHHhcccCCccccCcchhhccchHHHHHHhhhcCC----CCCcccc---ccccccccccc--
Q psy4573         100 YKCNQCDHVAKKLAYLQAHMKKHRNEYTAYCDLCQEGFFRKAKYETHNIQKHN----APPFECE---SCKKIFTYHKN--  170 (306)
Q Consensus       100 ~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~~h~----~~~~~c~---~c~~~f~~~~~--  170 (306)
                      .+|-+|.+..+-.+.|+.|+++|++++||+|.+|+++|.++.+|+.|+..|..    ..++.|+   +|-+-|...-.  
T Consensus       606 NqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kftn~V~lp  685 (958)
T KOG1074|consen  606 NQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKFTNAVTLP  685 (958)
T ss_pred             cceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcccccccCccccccccCCchhhhccccccccccc
Confidence            67999999999999999999999999999999999999999999999766653    3457888   88887764322  


Q ss_pred             ---cccc--------------CcceeccccccccCChHHHHHHHhhccC----------------CC----CcccCcCCC
Q psy4573         171 ---TTHL--------------GIKFECEVCHRKLSTKNHLRLHMRTHTN----------------ER----PAVCSYCGK  213 (306)
Q Consensus       171 ---~~~~--------------~~~~~C~~C~~~f~~~~~l~~H~~~h~~----------------~~----~~~C~~C~~  213 (306)
                         .+|.              ...-.|..|.+.|.+...+..++..|.+                +.    +..+..|+.
T Consensus       686 QhIriH~~~~~s~g~~a~e~~~~adq~~~~qk~~~~a~~f~~~~se~~~~~s~~~~~~~~~t~t~~~~~tp~~~e~~~~~  765 (958)
T KOG1074|consen  686 QHIRIHLGGQISNGGTAAEGILAADQCSSCQKTFSDARSFSQQISEQPSPESEPDEQMDERTETEELDVTPPPPENSCGR  765 (958)
T ss_pred             ceEEeecCCCCCCCcccccccchhcccchhhhcccccccchhhhhccCCcccCCcccccccccccccccCCCcccccccc
Confidence               1111              1135699999999999999998877621                11    344556666


Q ss_pred             ccCCcHHHHHHHHHc-----------------------cC----------------------------------------
Q psy4573         214 GFRRGDALTEHIRIH-----------------------TG----------------------------------------  230 (306)
Q Consensus       214 ~f~~~~~l~~H~~~h-----------------------~~----------------------------------------  230 (306)
                      .+.....+..+-..+                       +.                                        
T Consensus       766 ~~~~e~~i~~~g~te~asa~~~~vg~~s~~~~~~~~~~T~~k~~~~~~~~~~~~~~~v~~~pvl~~~~~~~l~eg~~t~~  845 (958)
T KOG1074|consen  766 ELEGEMAISVRGSTEEASANLDEVGTVSAAGEAGEEDDTSEKPTQASSFPGEILAPSVNMDPVLWNQETSMLNEGLATKT  845 (958)
T ss_pred             ccCcccccccccchhhhhcChhhhcCccccchhhhhcccCCCCcccccCCCcCCccccccCchhhccccccccccccccc
Confidence            655444333331111                       00                                        


Q ss_pred             -------------------------------CCCcccCcccCcCCChhHHHHHHhhccCCCcccCCcchHhhcChHHHHH
Q psy4573         231 -------------------------------QRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTKALVRH  279 (306)
Q Consensus       231 -------------------------------~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~  279 (306)
                                                     .....|..||+.|...+.|..|+++|.++++|.|.+|++.|+.+.+|..
T Consensus       846 n~~t~~~~~~sv~qs~~~p~l~p~l~~~~pvnn~h~C~vCgk~FsSSsALqiH~rTHtg~KPF~C~fC~~aFttrgnLKv  925 (958)
T KOG1074|consen  846 NEITPEGPADSVIQSGGVPTLEPSLGRPGPVNNAHVCNVCGKQFSSSAALEIHMRTHTGPKPFFCHFCEEAFTTRGNLKV  925 (958)
T ss_pred             ccccCCCcchhhhhhccccccCCCCCCCCcccchhhhccchhcccchHHHHHhhhcCCCCCCccchhhhhhhhhhhhhhh
Confidence                                           0116899999999999999999999999999999999999999999999


Q ss_pred             HhhhcCCCCCC
Q psy4573         280 HVRSHHSSARL  290 (306)
Q Consensus       280 H~~~~h~~~~~  290 (306)
                      ||.+|++..+.
T Consensus       926 HMgtH~w~q~~  936 (958)
T KOG1074|consen  926 HMGTHMWVQPP  936 (958)
T ss_pred             hhccccccCCC
Confidence            99999998763

>KOG2462|consensus

Probab=99.95  E-value=1.4e-28  Score=195.38  Aligned_cols=137  Identities=30%  Similarity=0.637  Sum_probs=121.0

Q ss_pred             CccccCcchhhccchHHHHHHhhhcCCCCCcccccccccccccccccccCcceeccccccccCChHHHHHHHhhccCCCC
Q psy4573         126 YTAYCDLCQEGFFRKAKYETHNIQKHNAPPFECESCKKIFTYHKNTTHLGIKFECEVCHRKLSTKNHLRLHMRTHTNERP  205 (306)
Q Consensus       126 ~~~~C~~C~~~~~~~~~l~~H~~~~h~~~~~~c~~c~~~f~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  205 (306)
                      ..|+|+.|++.+.+..+|.+|...|-.-.                   ....+.|+.|++.|.+...|..|+++|+  -+
T Consensus       129 ~r~~c~eCgk~ysT~snLsrHkQ~H~~~~-------------------s~ka~~C~~C~K~YvSmpALkMHirTH~--l~  187 (279)
T KOG2462|consen  129 PRYKCPECGKSYSTSSNLSRHKQTHRSLD-------------------SKKAFSCKYCGKVYVSMPALKMHIRTHT--LP  187 (279)
T ss_pred             Cceeccccccccccccccchhhccccccc-------------------ccccccCCCCCceeeehHHHhhHhhccC--CC
Confidence            35778888888888888888844444210                   1235789999999999999999999998  57


Q ss_pred             cccCcCCCccCCcHHHHHHHHHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCCcchHhhcChHHHHHHhhh
Q psy4573         206 AVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTKALVRHHVRS  283 (306)
Q Consensus       206 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  283 (306)
                      .+|.+||+.|...+.|+.|+++|+||+||.|++|++.|.++++|+.||++|.+.+.|+|..|+++|+.++.|.+|...
T Consensus       188 c~C~iCGKaFSRPWLLQGHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~SyLnKH~ES  265 (279)
T KOG2462|consen  188 CECGICGKAFSRPWLLQGHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALKSYLNKHSES  265 (279)
T ss_pred             cccccccccccchHHhhcccccccCCCCccCCcccchhcchHHHHHHHHhhcCCccccCcchhhHHHHHHHHHHhhhh
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999999765

>KOG2462|consensus

Probab=99.94  E-value=2.9e-27  Score=187.88  Aligned_cols=124  Identities=33%  Similarity=0.688  Sum_probs=118.6

Q ss_pred             ceeccccccccCChHHHHHHHhhccC---CCCcccCcCCCccCCcHHHHHHHHHccCCCCcccCcccCcCCChhHHHHHH
Q psy4573         177 KFECEVCHRKLSTKNHLRLHMRTHTN---ERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHK  253 (306)
Q Consensus       177 ~~~C~~C~~~f~~~~~l~~H~~~h~~---~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~  253 (306)
                      .|+|+.||+.+.+..+|.+|..+|..   .+.+.|.+|++.|.+-..|..|+++|+  -+.+|.+||+.|+....|.-|+
T Consensus       130 r~~c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~--l~c~C~iCGKaFSRPWLLQGHi  207 (279)
T KOG2462|consen  130 RYKCPECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHT--LPCECGICGKAFSRPWLLQGHI  207 (279)
T ss_pred             ceeccccccccccccccchhhcccccccccccccCCCCCceeeehHHHhhHhhccC--CCcccccccccccchHHhhccc
Confidence            69999999999999999999999864   577999999999999999999999997  6789999999999999999999


Q ss_pred             hhccCCCcccCCcchHhhcChHHHHHHhhhcCCCCCCCcccccccchhh
Q psy4573         254 RGHTGEIPYHCEFCSERFSTKALVRHHVRSHHSSARLGLNLLDHELSMI  302 (306)
Q Consensus       254 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~c~~~~~~~  302 (306)
                      ++|+|||||.|+.|+++|.++++|+.||++|.+.+.|+|..|+++|...
T Consensus       208 RTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~  256 (279)
T KOG2462|consen  208 RTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALK  256 (279)
T ss_pred             ccccCCCCccCCcccchhcchHHHHHHHHhhcCCccccCcchhhHHHHH
Confidence            9999999999999999999999999999999999999999999999754

>KOG3608|consensus

Probab=99.93  E-value=4.4e-26  Score=185.79  Aligned_cols=223  Identities=21%  Similarity=0.465  Sum_probs=156.5

Q ss_pred             cCCccccc--ccccccCChHHHHHHhhhcCCC------------C-ceecc--cchhccCChHHHhhhhhhcccCCcccC
Q psy4573          40 QDGSLACN--VCSKRCGSKSGLKIHMKSHTLS------------K-RYACS--ICLAEFHTLTEKDRHTLSHVVEGEYKC  102 (306)
Q Consensus        40 ~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~------------~-~~~C~--~C~~~~~~~~~l~~H~~~~~~~~~~~C  102 (306)
                      ....|.|.  .|+..|.+...|..|+..|..-            + .+.|.  .|...+.++..|++|++.|.+++..-|
T Consensus       131 ~g~~f~C~WedCe~~F~s~~ef~dHV~~H~l~ceyd~~~~~~D~~pv~~C~W~~Ct~~~~~k~~LreH~r~Hs~eKvvAC  210 (467)
T KOG3608|consen  131 LGQNFRCGWEDCEREFVSIVEFQDHVVKHALFCEYDIQKTPEDERPVTMCNWAMCTKHMGNKYRLREHIRTHSNEKVVAC  210 (467)
T ss_pred             chhhhccChhhcCCcccCHHHHHHHHHHhhhhhhhhhhhCCCCCCceeeccchhhhhhhccHHHHHHHHHhcCCCeEEec
Confidence            34446674  6888888888888887655321            0 12222  244444455555555555555555555


Q ss_pred             CCChhhhccHHHHHHHHHhcc--cCCccccCcchhhccchHHHHHHhhhcCCCCCcccccccccccccccccccCcceec
Q psy4573         103 NQCDHVAKKLAYLQAHMKKHR--NEYTAYCDLCQEGFFRKAKYETHNIQKHNAPPFECESCKKIFTYHKNTTHLGIKFEC  180 (306)
Q Consensus       103 ~~C~~~f~~~~~l~~H~~~~~--~~~~~~C~~C~~~~~~~~~l~~H~~~~h~~~~~~c~~c~~~f~~~~~~~~~~~~~~C  180 (306)
                      +.|+..|.++..|.-|++.-+  ...+|+|..|.+.|.+...|..|+..+..                        -|+|
T Consensus       211 p~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~rHvn------------------------~ykC  266 (467)
T KOG3608|consen  211 PHCGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVVRHVN------------------------CYKC  266 (467)
T ss_pred             chHHHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHHHhhh------------------------cccc
Confidence            555555555555554543221  23345555555555555555555333332                        5899


Q ss_pred             cccccccCChHHHHHHHhh-ccCCCCcccCcCCCccCCcHHHHHHHHHccCCCCcccCc--ccCcCCChhHHHHHHhhcc
Q psy4573         181 EVCHRKLSTKNHLRLHMRT-HTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEI--CGKGFTQKQALNTHKRGHT  257 (306)
Q Consensus       181 ~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~  257 (306)
                      ++|..+....++|.+|++. |..++||+|..|++.|...+.|..|+..|. +..|.|..  |.++|.....|++|++.++
T Consensus       267 plCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS-~~~y~C~h~~C~~s~r~~~q~~~H~~evh  345 (467)
T KOG3608|consen  267 PLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHS-KTVYQCEHPDCHYSVRTYTQMRRHFLEVH  345 (467)
T ss_pred             cccccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHHhcc-ccceecCCCCCcHHHHHHHHHHHHHHHhc
Confidence            9999999999999999997 888999999999999999999999999888 67799987  9999999999999998776


Q ss_pred             ---CCCcccCCcchHhhcChHHHHHHhhhcCCC
Q psy4573         258 ---GEIPYHCEFCSERFSTKALVRHHVRSHHSS  287 (306)
Q Consensus       258 ---~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  287 (306)
                         ++.+|.|-.|++.|++-.+|.+|+.+.|+=
T Consensus       346 Eg~np~~Y~CH~Cdr~ft~G~~L~~HL~kkH~f  378 (467)
T KOG3608|consen  346 EGNNPILYACHCCDRFFTSGKSLSAHLMKKHGF  378 (467)
T ss_pred             cCCCCCceeeecchhhhccchhHHHHHHHhhcc
Confidence               355699999999999999999999888864

>KOG3608|consensus

Probab=99.93  E-value=1.4e-25  Score=182.90  Aligned_cols=236  Identities=24%  Similarity=0.467  Sum_probs=197.5

Q ss_pred             ccccc--ccccccCC-hHHHHHHhhhc-----------------CCC-----------------Cceecc--cchhccCC
Q psy4573          43 SLACN--VCSKRCGS-KSGLKIHMKSH-----------------TLS-----------------KRYACS--ICLAEFHT   83 (306)
Q Consensus        43 ~~~C~--~C~~~f~~-~~~l~~H~~~h-----------------~~~-----------------~~~~C~--~C~~~~~~   83 (306)
                      .+.|.  .|++...+ ..+|.+|.-.|                 ...                 ..|.|.  .|++.|.+
T Consensus        69 e~qC~w~~C~f~~~~~s~~l~RHvy~H~y~~~l~q~G~~al~~~~dig~c~~~f~~~~~ip~~g~~f~C~WedCe~~F~s  148 (467)
T KOG3608|consen   69 EHQCTWNSCDFRTENSSADLIRHVYFHCYHTKLKQQGKLALDLHPDIGACTAPFRLMEKIPALGQNFRCGWEDCEREFVS  148 (467)
T ss_pred             ceeEEeccCCccccchHHHHHhhhhhhhhHHHHHHHHHHHHhcCCCcCcccCCcchhhccccchhhhccChhhcCCcccC
Confidence            57774  78877765 58899987433                 000                 125554  48999999


Q ss_pred             hHHHhhhhhhcccC------------Cc-ccC--CCChhhhccHHHHHHHHHhcccCCccccCcchhhccchHHHHHHhh
Q psy4573          84 LTEKDRHTLSHVVE------------GE-YKC--NQCDHVAKKLAYLQAHMKKHRNEYTAYCDLCQEGFFRKAKYETHNI  148 (306)
Q Consensus        84 ~~~l~~H~~~~~~~------------~~-~~C--~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~  148 (306)
                      ...+..|+..|.-.            +| +.|  ..|.+.+.+++.|++|++.|.+++...|+.||.-|.++..|-.|.+
T Consensus       149 ~~ef~dHV~~H~l~ceyd~~~~~~D~~pv~~C~W~~Ct~~~~~k~~LreH~r~Hs~eKvvACp~Cg~~F~~~tkl~DH~r  228 (467)
T KOG3608|consen  149 IVEFQDHVVKHALFCEYDIQKTPEDERPVTMCNWAMCTKHMGNKYRLREHIRTHSNEKVVACPHCGELFRTKTKLFDHLR  228 (467)
T ss_pred             HHHHHHHHHHhhhhhhhhhhhCCCCCCceeeccchhhhhhhccHHHHHHHHHhcCCCeEEecchHHHHhccccHHHHHHH
Confidence            99999998766321            11 344  4589999999999999999999999999999999999999999977


Q ss_pred             hcCCCCCcccccccccccccccccccCcceeccccccccCChHHHHHHHhhccCCCCcccCcCCCccCCcHHHHHHHHH-
Q psy4573         149 QKHNAPPFECESCKKIFTYHKNTTHLGIKFECEVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGDALTEHIRI-  227 (306)
Q Consensus       149 ~~h~~~~~~c~~c~~~f~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-  227 (306)
                      ....-.                    ..+|.|..|.+.|+....|..|+..|.  +-|+|+.|+......+.|..|++. 
T Consensus       229 Rqt~l~--------------------~n~fqC~~C~KrFaTeklL~~Hv~rHv--n~ykCplCdmtc~~~ssL~~H~r~r  286 (467)
T KOG3608|consen  229 RQTELN--------------------TNSFQCAQCFKRFATEKLLKSHVVRHV--NCYKCPLCDMTCSSASSLTTHIRYR  286 (467)
T ss_pred             hhhhhc--------------------CCchHHHHHHHHHhHHHHHHHHHHHhh--hcccccccccCCCChHHHHHHHHhh
Confidence            766321                    126889999999999999999999987  569999999999999999999985 


Q ss_pred             ccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCCc--chHhhcChHHHHHHhhhcC-CCCC--CCcccccccchh
Q psy4573         228 HTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEF--CSERFSTKALVRHHVRSHH-SSAR--LGLNLLDHELSM  301 (306)
Q Consensus       228 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h-~~~~--~~C~~c~~~~~~  301 (306)
                      |...+||+|+.|++.|.+.++|.+|+..|. +..|+|..  |.++|.+..+|.+|++.+| ++.+  |.|..|++.|+.
T Consensus       287 Hs~dkpfKCd~Cd~~c~~esdL~kH~~~HS-~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~np~~Y~CH~Cdr~ft~  364 (467)
T KOG3608|consen  287 HSKDKPFKCDECDTRCVRESDLAKHVQVHS-KTVYQCEHPDCHYSVRTYTQMRRHFLEVHEGNNPILYACHCCDRFFTS  364 (467)
T ss_pred             hccCCCccccchhhhhccHHHHHHHHHhcc-ccceecCCCCCcHHHHHHHHHHHHHHHhccCCCCCceeeecchhhhcc
Confidence            888999999999999999999999999777 77799988  9999999999999999999 4433  999999999875

>KOG1074|consensus

Probab=99.89  E-value=1.6e-24  Score=194.39  Aligned_cols=81  Identities=38%  Similarity=0.746  Sum_probs=73.7

Q ss_pred             ceeccccccccCChHHHHHHHhhccCCCCcccCcCCCccCCcHHHHHHHHHccCC----CCcccC---cccCcCCChhHH
Q psy4573         177 KFECEVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQ----RPYVCE---ICGKGFTQKQAL  249 (306)
Q Consensus       177 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~----~~~~C~---~C~~~f~~~~~L  249 (306)
                      +..|-+|.++..-.+.|+.|.++|+|++||+|.+||+.|.++.+|+.|+.+|...    .++.|+   +|-+.|.+.-.|
T Consensus       605 PNqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kftn~V~l  684 (958)
T KOG1074|consen  605 PNQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKFTNAVTL  684 (958)
T ss_pred             ccceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcccccccCccccccccCCchhhhcccccccccc
Confidence            4669999999999999999999999999999999999999999999999998654    347798   899999999999


Q ss_pred             HHHHhhcc
Q psy4573         250 NTHKRGHT  257 (306)
Q Consensus       250 ~~H~~~h~  257 (306)
                      ..|+++|.
T Consensus       685 pQhIriH~  692 (958)
T KOG1074|consen  685 PQHIRIHL  692 (958)
T ss_pred             cceEEeec
Confidence            99999887

>KOG3623|consensus

Probab=99.89  E-value=9.2e-24  Score=186.65  Aligned_cols=109  Identities=27%  Similarity=0.519  Sum_probs=96.6

Q ss_pred             cccccccccccCChHHHHHHhhh-cCC-CCceecccchhccCChHHHhhhhhhcccC-------------CcccCCCChh
Q psy4573          43 SLACNVCSKRCGSKSGLKIHMKS-HTL-SKRYACSICLAEFHTLTEKDRHTLSHVVE-------------GEYKCNQCDH  107 (306)
Q Consensus        43 ~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~~~~~~~l~~H~~~~~~~-------------~~~~C~~C~~  107 (306)
                      ..+|+.|++.+.+...|+.|++. |.. +..|.|.+|..+|..+..|.+|+..|...             +.|+|.+|++
T Consensus       210 lltcpycdrgykrltslkeHikyrhekne~nfsC~lCsytFAyRtQLErhm~~hkpg~dqa~sltqsa~lRKFKCtECgK  289 (1007)
T KOG3623|consen  210 LLTCPYCDRGYKRLTSLKEHIKYRHEKNEPNFSCMLCSYTFAYRTQLERHMQLHKPGGDQAISLTQSALLRKFKCTECGK  289 (1007)
T ss_pred             hhcchhHHHHHHHHHHHHHHHHHHHhhCCCCCcchhhhhhhhhHHHHHHHHHhhcCCCcccccccchhhhccccccccch
Confidence            37899999999999999999875 433 55799999999999999999999988543             3499999999


Q ss_pred             hhccHHHHHHHHHhcccCCccccCcchhhccchHHHHHHhhhcC
Q psy4573         108 VAKKLAYLQAHMKKHRNEYTAYCDLCQEGFFRKAKYETHNIQKH  151 (306)
Q Consensus       108 ~f~~~~~l~~H~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~~h  151 (306)
                      .|..+-.|+.|+++|.|++||.|+.|++.|....++..|+.+.-
T Consensus       290 AFKfKHHLKEHlRIHSGEKPfeCpnCkKRFSHSGSySSHmSSKK  333 (1007)
T KOG3623|consen  290 AFKFKHHLKEHLRIHSGEKPFECPNCKKRFSHSGSYSSHMSSKK  333 (1007)
T ss_pred             hhhhHHHHHhhheeecCCCCcCCcccccccccCCcccccccccc
Confidence            99999999999999999999999999999999999999976543

>KOG3623|consensus

Probab=99.83  E-value=6.4e-21  Score=168.86  Aligned_cols=119  Identities=29%  Similarity=0.531  Sum_probs=96.1

Q ss_pred             ccCCCChhhhccHHHHHHHHHhc--ccCCccccCcchhhccchHHHHHHhhhcCCCCCcccccccccccccccccccCcc
Q psy4573         100 YKCNQCDHVAKKLAYLQAHMKKH--RNEYTAYCDLCQEGFFRKAKYETHNIQKHNAPPFECESCKKIFTYHKNTTHLGIK  177 (306)
Q Consensus       100 ~~C~~C~~~f~~~~~l~~H~~~~--~~~~~~~C~~C~~~~~~~~~l~~H~~~~h~~~~~~c~~c~~~f~~~~~~~~~~~~  177 (306)
                      ..|+.|.+.+.....|+.|++.-  ..+..|.|..|.++|.+...|.+|+..+....+-.         ..-......+.
T Consensus       211 ltcpycdrgykrltslkeHikyrhekne~nfsC~lCsytFAyRtQLErhm~~hkpg~dqa---------~sltqsa~lRK  281 (1007)
T KOG3623|consen  211 LTCPYCDRGYKRLTSLKEHIKYRHEKNEPNFSCMLCSYTFAYRTQLERHMQLHKPGGDQA---------ISLTQSALLRK  281 (1007)
T ss_pred             hcchhHHHHHHHHHHHHHHHHHHHhhCCCCCcchhhhhhhhhHHHHHHHHHhhcCCCccc---------ccccchhhhcc
Confidence            78999999999999999998643  45668999999999999999999988887332100         00001122347


Q ss_pred             eeccccccccCChHHHHHHHhhccCCCCcccCcCCCccCCcHHHHHHHHH
Q psy4573         178 FECEVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGDALTEHIRI  227 (306)
Q Consensus       178 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  227 (306)
                      |+|..|++.|..+..|+.|+++|.|++||.|+.|++.|..+..+..|+..
T Consensus       282 FKCtECgKAFKfKHHLKEHlRIHSGEKPfeCpnCkKRFSHSGSySSHmSS  331 (1007)
T KOG3623|consen  282 FKCTECGKAFKFKHHLKEHLRIHSGEKPFECPNCKKRFSHSGSYSSHMSS  331 (1007)
T ss_pred             ccccccchhhhhHHHHHhhheeecCCCCcCCcccccccccCCcccccccc
Confidence            99999999999999999999999999999999999999998888888753

>KOG3576|consensus

Probab=99.74  E-value=3.9e-19  Score=134.71  Aligned_cols=115  Identities=34%  Similarity=0.706  Sum_probs=108.3

Q ss_pred             CcceeccccccccCChHHHHHHHhhccCCCCcccCcCCCccCCcHHHHHHHHHccCCCCcccCcccCcCCChhHHHHHHh
Q psy4573         175 GIKFECEVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKR  254 (306)
Q Consensus       175 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~  254 (306)
                      ...|.|.+|++.|.....|++|++.|...+.|.|..||+.|.+.-.|.+|+++|+|.+||+|..|++.|+.+..|..|++
T Consensus       115 ~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl~  194 (267)
T KOG3576|consen  115 QDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHLK  194 (267)
T ss_pred             CCeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHHH
Confidence            44799999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             hccC-----------CCcccCCcchHhhcChHHHHHHhhhcCCCCC
Q psy4573         255 GHTG-----------EIPYHCEFCSERFSTKALVRHHVRSHHSSAR  289 (306)
Q Consensus       255 ~h~~-----------~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~  289 (306)
                      ..++           .+.|.|..|+++-...+.+..|++.+|+..+
T Consensus       195 kvhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp~Sp  240 (267)
T KOG3576|consen  195 KVHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHPFSP  240 (267)
T ss_pred             HHcCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcCCCCH
Confidence            7776           3468999999999999999999999998765

>KOG3576|consensus

Probab=99.69  E-value=9e-18  Score=127.35  Aligned_cols=119  Identities=29%  Similarity=0.480  Sum_probs=109.0

Q ss_pred             hhcCCcccccccccccCChHHHHHHhhhcCCCCceecccchhccCChHHHhhhhhhcccCCcccCCCChhhhccHHHHHH
Q psy4573          38 VEQDGSLACNVCSKRCGSKSGLKIHMKSHTLSKRYACSICLAEFHTLTEKDRHTLSHVVEGEYKCNQCDHVAKKLAYLQA  117 (306)
Q Consensus        38 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~  117 (306)
                      ..+...|.|..|++.|..+..|.+|++-|...+.+.|..||+.|+..-+|.+|+++|.+..||+|..|++.|..+-.|..
T Consensus       112 ssd~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsles  191 (267)
T KOG3576|consen  112 SSDQDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLES  191 (267)
T ss_pred             CCCCCeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHH
Confidence            44567799999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhccc-----------CCccccCcchhhccchHHHHHHhhhcCCCCCc
Q psy4573         118 HMKKHRN-----------EYTAYCDLCQEGFFRKAKYETHNIQKHNAPPF  156 (306)
Q Consensus       118 H~~~~~~-----------~~~~~C~~C~~~~~~~~~l~~H~~~~h~~~~~  156 (306)
                      |++.-++           .+.|.|+.||.+......+..|+..+|+..|+
T Consensus       192 hl~kvhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp~Spa  241 (267)
T KOG3576|consen  192 HLKKVHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHPFSPA  241 (267)
T ss_pred             HHHHHcCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcCCCCHH
Confidence            9876554           46789999999999999999999999976654

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.29  E-value=1.3e-11  Score=110.81  Aligned_cols=147  Identities=17%  Similarity=0.395  Sum_probs=105.0

Q ss_pred             cccCcchhhccchHHHHHHhhhcCCCCCcccc--cccccccccccccccCcceeccccccccCChHHHHHHHhhccCCCC
Q psy4573         128 AYCDLCQEGFFRKAKYETHNIQKHNAPPFECE--SCKKIFTYHKNTTHLGIKFECEVCHRKLSTKNHLRLHMRTHTNERP  205 (306)
Q Consensus       128 ~~C~~C~~~~~~~~~l~~H~~~~h~~~~~~c~--~c~~~f~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  205 (306)
                      ..|+.|...... ..|..|. ..-......|+  .|+..|......    ..+.|+.|+..|. ...|..|+..++  .+
T Consensus       408 V~C~NC~~~i~l-~~l~lHe-~~C~r~~V~Cp~~~Cg~v~~r~el~----~H~~C~~Cgk~f~-~s~LekH~~~~H--kp  478 (567)
T PLN03086        408 VECRNCKHYIPS-RSIALHE-AYCSRHNVVCPHDGCGIVLRVEEAK----NHVHCEKCGQAFQ-QGEMEKHMKVFH--EP  478 (567)
T ss_pred             EECCCCCCccch-hHHHHHH-hhCCCcceeCCcccccceeeccccc----cCccCCCCCCccc-hHHHHHHHHhcC--CC
Confidence            356666554433 3344553 22233344555  366666433332    2358999999886 677999999975  78


Q ss_pred             cccCcCCCccCCcHHHHHHHHHccCCCCcccCcccCcCC----------ChhHHHHHHhhccCCCcccCCcchHhhcChH
Q psy4573         206 AVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFT----------QKQALNTHKRGHTGEIPYHCEFCSERFSTKA  275 (306)
Q Consensus       206 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~----------~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~  275 (306)
                      +.|+ |+..+ ....|..|+.+|.+.+++.|..|++.|.          ....|..|... .+.+++.|..|++.+.. .
T Consensus       479 v~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~-CG~rt~~C~~Cgk~Vrl-r  554 (567)
T PLN03086        479 LQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESI-CGSRTAPCDSCGRSVML-K  554 (567)
T ss_pred             ccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchhhhhhhHHHHHHh-cCCcceEccccCCeeee-h
Confidence            9999 99755 6689999999999999999999999884          23578899887 48889999999988754 4


Q ss_pred             HHHHHhhhcCCC
Q psy4573         276 LVRHHVRSHHSS  287 (306)
Q Consensus       276 ~l~~H~~~~h~~  287 (306)
                      .|..|+...|..
T Consensus       555 dm~~H~~~~h~~  566 (567)
T PLN03086        555 EMDIHQIAVHQK  566 (567)
T ss_pred             hHHHHHHHhhcC
Confidence            588888887753

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.19  E-value=1.6e-11  Score=110.31  Aligned_cols=93  Identities=17%  Similarity=0.409  Sum_probs=80.6

Q ss_pred             CCcccCcCCCccCCcHHHHHHHHHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCCcchHhhc----------C
Q psy4573         204 RPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFS----------T  273 (306)
Q Consensus       204 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~----------~  273 (306)
                      +.+.|+.|++.|. ...|..|+.+++  .++.|+ ||..+ .+..|..|+..|.+.+++.|++|++.|.          .
T Consensus       452 ~H~~C~~Cgk~f~-~s~LekH~~~~H--kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~  526 (567)
T PLN03086        452 NHVHCEKCGQAFQ-QGEMEKHMKVFH--EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDR  526 (567)
T ss_pred             cCccCCCCCCccc-hHHHHHHHHhcC--CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchhhh
Confidence            4578999999996 678999999985  789999 99755 7799999999999999999999999985          2


Q ss_pred             hHHHHHHhhhcCCCCCCCcccccccchhh
Q psy4573         274 KALVRHHVRSHHSSARLGLNLLDHELSMI  302 (306)
Q Consensus       274 ~~~l~~H~~~~h~~~~~~C~~c~~~~~~~  302 (306)
                      ...|..|.... +..++.|..|++.+..+
T Consensus       527 ~s~Lt~HE~~C-G~rt~~C~~Cgk~Vrlr  554 (567)
T PLN03086        527 LRGMSEHESIC-GSRTAPCDSCGRSVMLK  554 (567)
T ss_pred             hhhHHHHHHhc-CCcceEccccCCeeeeh
Confidence            45899998884 88999999999987654

>PHA00733 hypothetical protein

Probab=99.17  E-value=2.7e-11  Score=89.01  Aligned_cols=95  Identities=20%  Similarity=0.339  Sum_probs=68.9

Q ss_pred             HHHHHHHhhccCCCCcccCcCCCccCCcHHHHHH--HH---HccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCC
Q psy4573         191 NHLRLHMRTHTNERPAVCSYCGKGFRRGDALTEH--IR---IHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCE  265 (306)
Q Consensus       191 ~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H--~~---~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~  265 (306)
                      ..|.++-..--..+++.|.+|...|.....|..+  +.   .+.+.+||.|+.||+.|.+...|..|++.+  ..+|.|.
T Consensus        26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~  103 (128)
T PHA00733         26 EELKRYHSLTPEQKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCP  103 (128)
T ss_pred             HHhhhhhcCChhhhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC--CcCccCC
Confidence            3444433332334667788888777776666655  22   234577899999999999999999998865  3468999


Q ss_pred             cchHhhcChHHHHHHhhhcCCC
Q psy4573         266 FCSERFSTKALVRHHVRSHHSS  287 (306)
Q Consensus       266 ~C~~~f~~~~~l~~H~~~~h~~  287 (306)
                      .|+++|.....|..|+.+.|+.
T Consensus       104 ~CgK~F~~~~sL~~H~~~~h~~  125 (128)
T PHA00733        104 VCGKEFRNTDSTLDHVCKKHNI  125 (128)
T ss_pred             CCCCccCCHHHHHHHHHHhcCc
Confidence            9999999999999999888865

>PHA00733 hypothetical protein

Probab=99.05  E-value=2.9e-10  Score=83.60  Aligned_cols=80  Identities=23%  Similarity=0.384  Sum_probs=60.2

Q ss_pred             ceeccccccccCChHHH------HHHHhhccCCCCcccCcCCCccCCcHHHHHHHHHccCCCCcccCcccCcCCChhHHH
Q psy4573         177 KFECEVCHRKLSTKNHL------RLHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALN  250 (306)
Q Consensus       177 ~~~C~~C~~~f~~~~~l------~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~  250 (306)
                      ++.|.+|...|.....|      .+|+. +.+.+||.|+.|++.|.+...|..|++.+  +.+|.|++|++.|.....|.
T Consensus        40 ~~~~~~~~~~~~~~~~l~~~~~l~~~~~-~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~~CgK~F~~~~sL~  116 (128)
T PHA00733         40 RLIRAVVKTLIYNPQLLDESSYLYKLLT-SKAVSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCPVCGKEFRNTDSTL  116 (128)
T ss_pred             hHHHHHHhhhccChhhhcchHHHHhhcc-cCCCCCccCCCCCCcCCCHHHHHHHHhcC--CcCccCCCCCCccCCHHHHH
Confidence            34444444444444444      44433 34578999999999999999999999876  35799999999999999999


Q ss_pred             HHHhhccCC
Q psy4573         251 THKRGHTGE  259 (306)
Q Consensus       251 ~H~~~h~~~  259 (306)
                      .|+...|+.
T Consensus       117 ~H~~~~h~~  125 (128)
T PHA00733        117 DHVCKKHNI  125 (128)
T ss_pred             HHHHHhcCc
Confidence            999877653

>KOG3993|consensus

Probab=99.02  E-value=6.2e-11  Score=100.09  Aligned_cols=199  Identities=20%  Similarity=0.317  Sum_probs=126.0

Q ss_pred             ceecccchhccCChHHHhhhhhhcccCCcccCCCChhhhccHHHHHHHHHhcccCCccccCcchhhccchHHHHHHhhhc
Q psy4573          71 RYACSICLAEFHTLTEKDRHTLSHVVEGEYKCNQCDHVAKKLAYLQAHMKKHRNEYTAYCDLCQEGFFRKAKYETHNIQK  150 (306)
Q Consensus        71 ~~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~~  150 (306)
                      .|.|.+|...|.+.-.|.+|.-.......|+|++|++.|+-..+|..|.+.|.....--                    .
T Consensus       267 dyiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa--------------------~  326 (500)
T KOG3993|consen  267 DYICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAA--------------------K  326 (500)
T ss_pred             HHHHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccCCchhhh--------------------h
Confidence            48888888888888888888755444556888888888888888888888886432100                    0


Q ss_pred             CCCCCccc-cccccccccc--ccccccCcceeccccccccCChHHHHHHHhhccCCCC-----------------cccCc
Q psy4573         151 HNAPPFEC-ESCKKIFTYH--KNTTHLGIKFECEVCHRKLSTKNHLRLHMRTHTNERP-----------------AVCSY  210 (306)
Q Consensus       151 h~~~~~~c-~~c~~~f~~~--~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-----------------~~C~~  210 (306)
                      .+..|-+- ...+......  +-....+..|.|..|++.|+....|+.|+.+|.....                 +.+..
T Consensus       327 a~~~P~k~~~~~rae~~ea~rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~~~k~~a~~f~~s~~~~l~~~~~~  406 (500)
T KOG3993|consen  327 AGSPPPKQAVETRAEVQEAERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAPLAKEKAPKFLLSRVIPLMHFNQA  406 (500)
T ss_pred             cCCCChhhhhhhhhhhhhccccCCcccCceeecHHhhhhhHHHHHHHHhHHhhhccccchhcccCcchhhcccccccccc
Confidence            00000000 0000000000  0011223389999999999999999999888753211                 22344


Q ss_pred             CCCccCCcHHHHHHHHHccC-CCCcccCcccCcCCChhHHHHHHhhccCCCcccCCcchHhhcChHHHHHHhhhcCCCCC
Q psy4573         211 CGKGFRRGDALTEHIRIHTG-QRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTKALVRHHVRSHHSSAR  289 (306)
Q Consensus       211 C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~  289 (306)
                      ++-.+.....-..++-.+.+ ..-..++.++..++++..=-.+.+.-..++.|.|.+|.-+|.....|.+|+..-|+...
T Consensus       407 ~a~h~~a~~~~g~~vl~~a~sael~~pp~~~~ppsss~~sgg~~rlg~~~q~f~~ky~~atfyss~~ltrhin~~Hpse~  486 (500)
T KOG3993|consen  407 VATHSSASDSHGDEVLYVAGSAELELPPYDGSPPSSSGSSGGYGRLGIAEQGFTCKYCPATFYSSPGLTRHINKCHPSEL  486 (500)
T ss_pred             cccccccccccccceeeeeccccccCCCCCCCCcccCCCCCccccccchhhccccccchHhhhcCcchHhHhhhcChHHh
Confidence            44333322222222222211 12245788888888877766777666777889999999999999999999999888643

>PHA02768 hypothetical protein; Provisional

Probab=98.82  E-value=1.4e-09  Score=65.82  Aligned_cols=41  Identities=24%  Similarity=0.493  Sum_probs=20.2

Q ss_pred             cccCcccCcCCChhHHHHHHhhccCCCcccCCcchHhhcChHH
Q psy4573         234 YVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTKAL  276 (306)
Q Consensus       234 ~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~  276 (306)
                      |.|++||+.|+..+.|..|+++|.  ++|+|..|++.|...+.
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~   46 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGE   46 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceecccce
Confidence            445555555555555555555544  34455555555544433

>PHA02768 hypothetical protein; Provisional

Probab=98.75  E-value=3e-09  Score=64.33  Aligned_cols=42  Identities=17%  Similarity=0.367  Sum_probs=21.3

Q ss_pred             cccCcCCCccCCcHHHHHHHHHccCCCCcccCcccCcCCChhHH
Q psy4573         206 AVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQAL  249 (306)
Q Consensus       206 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L  249 (306)
                      |.|+.||+.|...+.|..|+++|+  ++|+|..|++.|...+.|
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l   47 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEY   47 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceeccccee
Confidence            445555555555555555555554  345555555555544443

>KOG3993|consensus

Probab=98.54  E-value=2.8e-08  Score=84.36  Aligned_cols=188  Identities=17%  Similarity=0.189  Sum_probs=116.5

Q ss_pred             CcccccccccccCChHHHHHHhhhcCCCCceecccchhccCChHHHhhhhhhcccCCcccC---CCChhhhccHHHHHHH
Q psy4573          42 GSLACNVCSKRCGSKSGLKIHMKSHTLSKRYACSICLAEFHTLTEKDRHTLSHVVEGEYKC---NQCDHVAKKLAYLQAH  118 (306)
Q Consensus        42 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~C---~~C~~~f~~~~~l~~H  118 (306)
                      +.|.|..|...|.....|..|.-.-.-.-.|.|+.|+++|+.-.+|..|.+.|.....--=   +-=.+........+.-
T Consensus       266 GdyiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea  345 (500)
T KOG3993|consen  266 GDYICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEA  345 (500)
T ss_pred             HHHHHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhc
Confidence            3499999999999999999996543334469999999999999999999998854321100   0000000011111111


Q ss_pred             HHh--cccCCccccCcchhhccchHHHHHHhhhcCCC-CC-------c---------cccccccccccccc-------cc
Q psy4573         119 MKK--HRNEYTAYCDLCQEGFFRKAKYETHNIQKHNA-PP-------F---------ECESCKKIFTYHKN-------TT  172 (306)
Q Consensus       119 ~~~--~~~~~~~~C~~C~~~~~~~~~l~~H~~~~h~~-~~-------~---------~c~~c~~~f~~~~~-------~~  172 (306)
                      .+.  ...+..|.|..|++.|....+|+.|+..++.. ..       +         -+..+...+.....       ..
T Consensus       346 ~rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~~~k~~a~~f~~s~~~~l~~~~~~~a~h~~a~~~~g~~vl~~a  425 (500)
T KOG3993|consen  346 ERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAPLAKEKAPKFLLSRVIPLMHFNQAVATHSSASDSHGDEVLYVA  425 (500)
T ss_pred             cccCCcccCceeecHHhhhhhHHHHHHHHhHHhhhccccchhcccCcchhhcccccccccccccccccccccccceeeee
Confidence            110  12345789999999999999999998887721 10       1         12222222221111       01


Q ss_pred             ccCcceeccccccccCChHHHHHHHhhccCCCCcccCcCCCccCCcHHHHHHHHHcc
Q psy4573         173 HLGIKFECEVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHT  229 (306)
Q Consensus       173 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  229 (306)
                      .......++.++-.+.++..--.+.+.-..+..|.|.+|.-.|.++..|.+|+...+
T Consensus       426 ~sael~~pp~~~~ppsss~~sgg~~rlg~~~q~f~~ky~~atfyss~~ltrhin~~H  482 (500)
T KOG3993|consen  426 GSAELELPPYDGSPPSSSGSSGGYGRLGIAEQGFTCKYCPATFYSSPGLTRHINKCH  482 (500)
T ss_pred             ccccccCCCCCCCCcccCCCCCccccccchhhccccccchHhhhcCcchHhHhhhcC
Confidence            111234577788666666544444444445667899999999999999999987643

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.47  E-value=9.1e-08  Score=49.39  Aligned_cols=20  Identities=55%  Similarity=1.301  Sum_probs=7.6

Q ss_pred             HHHHHccCCCCcccCcccCc
Q psy4573         223 EHIRIHTGQRPYVCEICGKG  242 (306)
Q Consensus       223 ~H~~~h~~~~~~~C~~C~~~  242 (306)
                      .|+++|++++||.|++|++.
T Consensus         4 ~H~~~H~~~k~~~C~~C~k~   23 (26)
T PF13465_consen    4 RHMRTHTGEKPYKCPYCGKS   23 (26)
T ss_dssp             HHHHHHSSSSSEEESSSSEE
T ss_pred             HHhhhcCCCCCCCCCCCcCe
Confidence            33333333333333333333

...

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.46  E-value=5.9e-08  Score=50.09  Aligned_cols=25  Identities=52%  Similarity=1.103  Sum_probs=17.9

Q ss_pred             HHHHHHhhccCCCcccCCcchHhhc
Q psy4573         248 ALNTHKRGHTGEIPYHCEFCSERFS  272 (306)
Q Consensus       248 ~L~~H~~~h~~~~~~~C~~C~~~f~  272 (306)
                      +|.+|+++|.++++|.|++|+++|.
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEES
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeC
Confidence            3667777777777777777777764

...

>PHA00616 hypothetical protein

Probab=98.45  E-value=6.8e-08  Score=55.55  Aligned_cols=32  Identities=25%  Similarity=0.374  Sum_probs=16.4

Q ss_pred             cccCcccCcCCChhHHHHHHhhccCCCcccCC
Q psy4573         234 YVCEICGKGFTQKQALNTHKRGHTGEIPYHCE  265 (306)
Q Consensus       234 ~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~  265 (306)
                      |+|+.||+.|.+.+.|..|++.|++++++.|.
T Consensus         2 YqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~   33 (44)
T PHA00616          2 YQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLE   33 (44)
T ss_pred             CccchhhHHHhhHHHHHHHHHHhcCCCcccee
Confidence            45555555555555555555555555554443

>PHA00732 hypothetical protein

Probab=98.28  E-value=4.7e-07  Score=60.33  Aligned_cols=46  Identities=33%  Similarity=0.491  Sum_probs=25.9

Q ss_pred             CcccCcCCCccCCcHHHHHHHHH-ccCCCCcccCcccCcCCChhHHHHHHhhc
Q psy4573         205 PAVCSYCGKGFRRGDALTEHIRI-HTGQRPYVCEICGKGFTQKQALNTHKRGH  256 (306)
Q Consensus       205 ~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~L~~H~~~h  256 (306)
                      ||.|..|++.|.+...|..|++. |.   ++.|+.||+.|.   .|..|.++.
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~---~~~C~~CgKsF~---~l~~H~~~~   47 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT---LTKCPVCNKSYR---RLNQHFYSQ   47 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC---CCccCCCCCEeC---Chhhhhccc
Confidence            35566666666666666666653 33   235666666665   355555443

>PHA00616 hypothetical protein

Probab=98.27  E-value=6e-07  Score=51.66  Aligned_cols=33  Identities=33%  Similarity=0.520  Sum_probs=30.8

Q ss_pred             cccCCcchHhhcChHHHHHHhhhcCCCCCCCcc
Q psy4573         261 PYHCEFCSERFSTKALVRHHVRSHHSSARLGLN  293 (306)
Q Consensus       261 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~  293 (306)
                      +|+|+.||+.|.+.+.|.+|+++||+..++.|.
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~   33 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLE   33 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCcccee
Confidence            589999999999999999999999999988763

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.20  E-value=2.5e-06  Score=52.78  Aligned_cols=51  Identities=27%  Similarity=0.582  Sum_probs=32.1

Q ss_pred             CcccCcccCcCCChhHHHHHHhhccC--CCcccCCcchHhhcChHHHHHHhhhcCC
Q psy4573         233 PYVCEICGKGFTQKQALNTHKRGHTG--EIPYHCEFCSERFSTKALVRHHVRSHHS  286 (306)
Q Consensus       233 ~~~C~~C~~~f~~~~~L~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~~h~  286 (306)
                      .|.||.|++. .+...|..|....|.  .+.+.|++|...+.  .+|..|+..+|+
T Consensus         2 ~f~CP~C~~~-~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H~   54 (54)
T PF05605_consen    2 SFTCPYCGKG-FSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQHR   54 (54)
T ss_pred             CcCCCCCCCc-cCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhcC
Confidence            3677777773 455667777654433  23577777776544  377777777663

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PHA00732 hypothetical protein

Probab=98.14  E-value=2.1e-06  Score=57.20  Aligned_cols=46  Identities=33%  Similarity=0.641  Sum_probs=26.7

Q ss_pred             ceeccccccccCChHHHHHHHhh-ccCCCCcccCcCCCccCCcHHHHHHHHHc
Q psy4573         177 KFECEVCHRKLSTKNHLRLHMRT-HTNERPAVCSYCGKGFRRGDALTEHIRIH  228 (306)
Q Consensus       177 ~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~h  228 (306)
                      ||.|+.|++.|.+...|..|++. |.   ++.|+.|++.|.   .+..|+...
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~---~~~C~~CgKsF~---~l~~H~~~~   47 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT---LTKCPVCNKSYR---RLNQHFYSQ   47 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC---CCccCCCCCEeC---Chhhhhccc
Confidence            35666666666666666666653 33   245666666665   345565443

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.94  E-value=1.7e-05  Score=48.98  Aligned_cols=49  Identities=33%  Similarity=0.587  Sum_probs=25.4

Q ss_pred             cccCcCCCccCCcHHHHHHHHH-ccC-CCCcccCcccCcCCChhHHHHHHhhcc
Q psy4573         206 AVCSYCGKGFRRGDALTEHIRI-HTG-QRPYVCEICGKGFTQKQALNTHKRGHT  257 (306)
Q Consensus       206 ~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~L~~H~~~h~  257 (306)
                      |.|++|++ ..+...|..|+.. |.. .+.+.||+|...+.  .+|..|+..++
T Consensus         3 f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    3 FTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             cCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhc
Confidence            55666666 3344556666543 332 23456666665433  36666665543

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.76  E-value=1.2e-05  Score=40.12  Aligned_cols=20  Identities=50%  Similarity=1.011  Sum_probs=8.8

Q ss_pred             ccCcccCcCCChhHHHHHHh
Q psy4573         235 VCEICGKGFTQKQALNTHKR  254 (306)
Q Consensus       235 ~C~~C~~~f~~~~~L~~H~~  254 (306)
                      +|++|++.|.+...|..|++
T Consensus         2 ~C~~C~~~f~~~~~l~~H~~   21 (23)
T PF00096_consen    2 KCPICGKSFSSKSNLKRHMR   21 (23)
T ss_dssp             EETTTTEEESSHHHHHHHHH
T ss_pred             CCCCCCCccCCHHHHHHHHh
Confidence            34444444444444444443

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.66  E-value=3.6e-05  Score=38.35  Aligned_cols=22  Identities=36%  Similarity=0.963  Sum_probs=14.4

Q ss_pred             eeccccccccCChHHHHHHHhh
Q psy4573         178 FECEVCHRKLSTKNHLRLHMRT  199 (306)
Q Consensus       178 ~~C~~C~~~f~~~~~l~~H~~~  199 (306)
                      |.|+.|++.|.+...|..|++.
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhH
Confidence            4566666666666666666654

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.63  E-value=2.7e-05  Score=39.16  Aligned_cols=24  Identities=38%  Similarity=1.034  Sum_probs=11.5

Q ss_pred             ccCCcchHhhcChHHHHHHhhhcC
Q psy4573         262 YHCEFCSERFSTKALVRHHVRSHH  285 (306)
Q Consensus       262 ~~C~~C~~~f~~~~~l~~H~~~~h  285 (306)
                      |.|++|++.|.+...|..|+.++|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            345555555555555555555443

...

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.56  E-value=3.9e-05  Score=39.90  Aligned_cols=24  Identities=46%  Similarity=0.945  Sum_probs=13.1

Q ss_pred             cccCcccCcCCChhHHHHHHhhcc
Q psy4573         234 YVCEICGKGFTQKQALNTHKRGHT  257 (306)
Q Consensus       234 ~~C~~C~~~f~~~~~L~~H~~~h~  257 (306)
                      |.|..|++.|.+...|..|++.|.
T Consensus         2 ~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    2 FECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             EEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCccCCccCChhHHHHHhHHhc
Confidence            455555555555555555555443

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.53  E-value=5.1e-05  Score=38.09  Aligned_cols=24  Identities=46%  Similarity=0.956  Sum_probs=14.0

Q ss_pred             cccCcccCcCCChhHHHHHHhhcc
Q psy4573         234 YVCEICGKGFTQKQALNTHKRGHT  257 (306)
Q Consensus       234 ~~C~~C~~~f~~~~~L~~H~~~h~  257 (306)
                      |.|++|++.|.+...|..|++.|+
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            456666666666666666666543

...

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.50  E-value=5e-05  Score=53.59  Aligned_cols=20  Identities=30%  Similarity=0.685  Sum_probs=0.0

Q ss_pred             ccccccccCChHHHHHHHhh
Q psy4573         180 CEVCHRKLSTKNHLRLHMRT  199 (306)
Q Consensus       180 C~~C~~~f~~~~~l~~H~~~  199 (306)
                      |..|+..|.+...|..|+..
T Consensus         2 C~~C~~~f~~~~~l~~H~~~   21 (100)
T PF12756_consen    2 CLFCDESFSSVDDLLQHMKK   21 (100)
T ss_dssp             --------------------
T ss_pred             cccccccccccccccccccc
Confidence            55555555555555555544

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.41  E-value=8.1e-05  Score=52.49  Aligned_cols=73  Identities=19%  Similarity=0.254  Sum_probs=17.1

Q ss_pred             cccccccccCChHHHHHHhhhcCCCCceecccchhccCChHHHhhhhhhcccCCcccCCCChhhhccHHHHHHHHHhc
Q psy4573          45 ACNVCSKRCGSKSGLKIHMKSHTLSKRYACSICLAEFHTLTEKDRHTLSHVVEGEYKCNQCDHVAKKLAYLQAHMKKH  122 (306)
Q Consensus        45 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~  122 (306)
                      .|..|+..|.+...|..|+...++...-    ....+.....+..+++... ...+.|.+|++.|.+...|..||+.+
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~----~~~~l~~~~~~~~~~~~~~-~~~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDIP----DQKYLVDPNRLLNYLRKKV-KESFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             -----------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             Cccccccccccccccccccccccccccc----ccccccccccccccccccc-CCCCCCCccCCCCcCHHHHHHHHcCc
Confidence            4777888888888888887665543211    1111122333333333221 22477777777777777777777654

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.36  E-value=7.7e-05  Score=38.77  Aligned_cols=26  Identities=42%  Similarity=0.894  Sum_probs=24.0

Q ss_pred             cccCCcchHhhcChHHHHHHhhhcCC
Q psy4573         261 PYHCEFCSERFSTKALVRHHVRSHHS  286 (306)
Q Consensus       261 ~~~C~~C~~~f~~~~~l~~H~~~~h~  286 (306)
                      +|.|..|++.|.+...|..|++.|++
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~~   26 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHCS   26 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhcC
Confidence            58999999999999999999988875

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.16  E-value=0.00014  Score=60.08  Aligned_cols=53  Identities=26%  Similarity=0.698  Sum_probs=44.1

Q ss_pred             CCCCcccCc--ccCcCCChhHHHHHHhhcc-------------------CCCcccCCcchHhhcChHHHHHHhh
Q psy4573         230 GQRPYVCEI--CGKGFTQKQALNTHKRGHT-------------------GEIPYHCEFCSERFSTKALVRHHVR  282 (306)
Q Consensus       230 ~~~~~~C~~--C~~~f~~~~~L~~H~~~h~-------------------~~~~~~C~~C~~~f~~~~~l~~H~~  282 (306)
                      +++||+|++  |.+.+.++-.|.-|+.--|                   ..+||+|+.|++.+.+...|..|..
T Consensus       346 d~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr~  419 (423)
T COG5189         346 DGKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHRK  419 (423)
T ss_pred             cCceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceeccc
Confidence            458999976  9999999999999986433                   2478999999999999999998854

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.95  E-value=0.0003  Score=35.32  Aligned_cols=24  Identities=38%  Similarity=0.822  Sum_probs=13.6

Q ss_pred             ccCCcchHhhcChHHHHHHhhhcCC
Q psy4573         262 YHCEFCSERFSTKALVRHHVRSHHS  286 (306)
Q Consensus       262 ~~C~~C~~~f~~~~~l~~H~~~~h~  286 (306)
                      |+|+.|++... ...|.+|++.+|+
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H~   24 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHHP   24 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHHS
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhCc
Confidence            45666666665 6666666666553

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.67  E-value=0.0013  Score=38.87  Aligned_cols=24  Identities=29%  Similarity=0.504  Sum_probs=8.4

Q ss_pred             cccCcccCcCCChhHHHHHHhhcc
Q psy4573         234 YVCEICGKGFTQKQALNTHKRGHT  257 (306)
Q Consensus       234 ~~C~~C~~~f~~~~~L~~H~~~h~  257 (306)
                      -.|++|+..+....+|.+|+..+|
T Consensus        25 atCP~C~a~~~~srnLrRHle~~H   48 (54)
T PF09237_consen   25 ATCPICGAVIRQSRNLRRHLEIRH   48 (54)
T ss_dssp             EE-TTT--EESSHHHHHHHHHHHT
T ss_pred             CCCCcchhhccchhhHHHHHHHHh
Confidence            334444444444444444443333

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>smart00355 ZnF_C2H2 zinc finger

Probab=96.65  E-value=0.0017  Score=32.92  Aligned_cols=19  Identities=53%  Similarity=0.936  Sum_probs=7.7

Q ss_pred             cCcccCcCCChhHHHHHHh
Q psy4573         236 CEICGKGFTQKQALNTHKR  254 (306)
Q Consensus       236 C~~C~~~f~~~~~L~~H~~  254 (306)
                      |+.|++.|.+...|..|++
T Consensus         3 C~~C~~~f~~~~~l~~H~~   21 (26)
T smart00355        3 CPECGKVFKSKSALKEHMR   21 (26)
T ss_pred             CCCCcchhCCHHHHHHHHH
Confidence            3344444444444444433

>smart00355 ZnF_C2H2 zinc finger

Probab=96.53  E-value=0.0021  Score=32.49  Aligned_cols=24  Identities=33%  Similarity=0.863  Sum_probs=21.6

Q ss_pred             ccCCcchHhhcChHHHHHHhhhcC
Q psy4573         262 YHCEFCSERFSTKALVRHHVRSHH  285 (306)
Q Consensus       262 ~~C~~C~~~f~~~~~l~~H~~~~h  285 (306)
                      |.|..|+++|.....|..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            579999999999999999998654

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.50  E-value=0.0021  Score=37.92  Aligned_cols=34  Identities=21%  Similarity=0.416  Sum_probs=24.6

Q ss_pred             ccCCCcccCCcchHhhcChHHHHHHhhhcCCCCC
Q psy4573         256 HTGEIPYHCEFCSERFSTKALVRHHVRSHHSSAR  289 (306)
Q Consensus       256 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~  289 (306)
                      +-.++|-.|++|+..+.+..+|.+|+...|+.++
T Consensus        19 ~~S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   19 SQSEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             CTTS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             hccCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            3457788999999999999999999999998654

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=96.43  E-value=0.0072  Score=50.82  Aligned_cols=128  Identities=24%  Similarity=0.419  Sum_probs=86.2

Q ss_pred             cccccc--cccccCChHHHHHHhhhcCCCCceecccch---hcc------CChHHHhhhhhhcccCCc----ccCCCChh
Q psy4573          43 SLACNV--CSKRCGSKSGLKIHMKSHTLSKRYACSICL---AEF------HTLTEKDRHTLSHVVEGE----YKCNQCDH  107 (306)
Q Consensus        43 ~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~---~~~------~~~~~l~~H~~~~~~~~~----~~C~~C~~  107 (306)
                      .|.||.  |..+......|..|.++.++.  +.|.+|-   +.|      .++..|..|...-..+.-    =.|..|..
T Consensus       151 ~F~CP~skc~~~C~~~k~lk~H~K~~H~~--~~C~~C~~nKk~F~~E~~lF~~~~Lr~H~~~G~~e~GFKGHP~C~FC~~  228 (493)
T COG5236         151 SFKCPKSKCHRRCGSLKELKKHYKAQHGF--VLCSECIGNKKDFWNEIRLFRSSTLRDHKNGGLEEEGFKGHPLCIFCKI  228 (493)
T ss_pred             HhcCCchhhhhhhhhHHHHHHHHHhhcCc--EEhHhhhcCcccCccceeeeecccccccccCCccccCcCCCchhhhccc
Confidence            488874  788888889999999886654  7788883   233      345566667643222212    25999999


Q ss_pred             hhccHHHHHHHHHhcccCCccccCcchhh-------ccchHHHHHHhhhcCCCCCcccccccccccccccccccCcceec
Q psy4573         108 VAKKLAYLQAHMKKHRNEYTAYCDLCQEG-------FFRKAKYETHNIQKHNAPPFECESCKKIFTYHKNTTHLGIKFEC  180 (306)
Q Consensus       108 ~f~~~~~l~~H~~~~~~~~~~~C~~C~~~-------~~~~~~l~~H~~~~h~~~~~~c~~c~~~f~~~~~~~~~~~~~~C  180 (306)
                      .|-+...|..|++..+..    |-+|+..       |.+...|..|++..|-    .|..                    
T Consensus       229 ~FYdDDEL~~HcR~~HE~----ChICD~v~p~~~QYFK~Y~~Le~HF~~~hy----~ct~--------------------  280 (493)
T COG5236         229 YFYDDDELRRHCRLRHEA----CHICDMVGPIRYQYFKSYEDLEAHFRNAHY----CCTF--------------------  280 (493)
T ss_pred             eecChHHHHHHHHhhhhh----hhhhhccCccchhhhhCHHHHHHHhhcCce----EEEE--------------------
Confidence            999999999999876643    5555543       6677888888776662    1211                    


Q ss_pred             cccc----cccCChHHHHHHHhhc
Q psy4573         181 EVCH----RKLSTKNHLRLHMRTH  200 (306)
Q Consensus       181 ~~C~----~~f~~~~~l~~H~~~h  200 (306)
                      ..|-    .+|++...|..|+...
T Consensus       281 qtc~~~k~~vf~~~~el~~h~~~~  304 (493)
T COG5236         281 QTCRVGKCYVFPYHTELLEHLTRF  304 (493)
T ss_pred             EEEecCcEEEeccHHHHHHHHHHH
Confidence            0121    3588888899998653

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.41  E-value=0.0018  Score=32.42  Aligned_cols=23  Identities=30%  Similarity=0.629  Sum_probs=11.7

Q ss_pred             cccCcccCcCCChhHHHHHHhhcc
Q psy4573         234 YVCEICGKGFTQKQALNTHKRGHT  257 (306)
Q Consensus       234 ~~C~~C~~~f~~~~~L~~H~~~h~  257 (306)
                      |+|+.|+.... ...|.+|++.++
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            45556665555 555666655543

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=96.23  E-value=0.0014  Score=54.36  Aligned_cols=51  Identities=22%  Similarity=0.444  Sum_probs=35.9

Q ss_pred             CCcccCCC--ChhhhccHHHHHHHHHhcc-------------------cCCccccCcchhhccchHHHHHHh
Q psy4573          97 EGEYKCNQ--CDHVAKKLAYLQAHMKKHR-------------------NEYTAYCDLCQEGFFRKAKYETHN  147 (306)
Q Consensus        97 ~~~~~C~~--C~~~f~~~~~l~~H~~~~~-------------------~~~~~~C~~C~~~~~~~~~l~~H~  147 (306)
                      ++||+|++  |++.+.+.-.|+.|+..-+                   .++||+|++|++.+.....|+.|+
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr  418 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHR  418 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceecc
Confidence            47788866  7788888778887775433                   136777777777777777777663

>KOG1146|consensus

Probab=96.07  E-value=0.003  Score=62.13  Aligned_cols=111  Identities=16%  Similarity=0.287  Sum_probs=72.9

Q ss_pred             CCcccccccccccCChHHHHHHhhhcCCCCceecccchhccCChHHHhhhhhhcccCCcccCCCChhhhccHHHHHHHHH
Q psy4573          41 DGSLACNVCSKRCGSKSGLKIHMKSHTLSKRYACSICLAEFHTLTEKDRHTLSHVVEGEYKCNQCDHVAKKLAYLQAHMK  120 (306)
Q Consensus        41 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~  120 (306)
                      .+.+.|+.|++.|.....|..||+.-+.+..-  .+|... .....+.+-...-.+..+|.|..|...+....+|.+|++
T Consensus       463 ~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~--~~c~~g-q~~~~~arg~~~~~~~~p~~C~~C~~stttng~Lsihlq  539 (1406)
T KOG1146|consen  463 FKTLKCPKCNWHYKLAQTLGVHMRSKHPESQS--AYCKAG-QNHPRLARGEVYRCPGKPYPCRACNYSTTTNGNLSIHLQ  539 (1406)
T ss_pred             cccccCCccchhhhhHHHhhhcccccccccch--hHhHhc-cccccccccccccCCCCcccceeeeeeeecchHHHHHHH
Confidence            36788999999999999999998885444322  333322 122222222223345677888888888888888888875


Q ss_pred             hccc-------------------------------------------CCccccCcchhhccchHHHHHHhhhcCCCC
Q psy4573         121 KHRN-------------------------------------------EYTAYCDLCQEGFFRKAKYETHNIQKHNAP  154 (306)
Q Consensus       121 ~~~~-------------------------------------------~~~~~C~~C~~~~~~~~~l~~H~~~~h~~~  154 (306)
                      .-..                                           .-.|.|..|++......+|+.|+...+...
T Consensus       540 S~~h~~~lee~~~~~g~~v~~~~~~v~s~~P~~ag~~~~ags~~pktkP~~~C~vc~yetniarnlrihmtss~~s~  616 (1406)
T KOG1146|consen  540 SDLHRNELEEAEENAGEQVRLLPASVTSAVPEEAGLGPSAGSSGPKTKPSWRCEVCSYETNIARNLRIHMTASPSSS  616 (1406)
T ss_pred             HHhhHHHHHHHHhccccchhhhhhhhcccCcccccCCCCCCCCCCCCCCCcchhhhcchhhhhhccccccccCCCCC
Confidence            4210                                           123678888888888888888877666433

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.05  E-value=0.0042  Score=31.35  Aligned_cols=22  Identities=32%  Similarity=0.830  Sum_probs=14.1

Q ss_pred             ccccccccccCChHHHHHHhhh
Q psy4573          44 LACNVCSKRCGSKSGLKIHMKS   65 (306)
Q Consensus        44 ~~C~~C~~~f~~~~~l~~H~~~   65 (306)
                      |.|..|+..|.+...|..|++.
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s   22 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRS   22 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTT
T ss_pred             CCCCCCCCCcCCHHHHHHHHCc
Confidence            4566666666666666666654

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.01  E-value=0.0054  Score=30.95  Aligned_cols=22  Identities=41%  Similarity=1.055  Sum_probs=14.4

Q ss_pred             eeccccccccCChHHHHHHHhh
Q psy4573         178 FECEVCHRKLSTKNHLRLHMRT  199 (306)
Q Consensus       178 ~~C~~C~~~f~~~~~l~~H~~~  199 (306)
                      |.|.+|++.|.+...|..|++.
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s   22 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRS   22 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTT
T ss_pred             CCCCCCCCCcCCHHHHHHHHCc
Confidence            4566666666666666666654

>PRK04860 hypothetical protein; Provisional

Probab=95.90  E-value=0.0042  Score=47.54  Aligned_cols=34  Identities=26%  Similarity=0.662  Sum_probs=16.0

Q ss_pred             cccCcCCCccCCcHHHHHHHHHccCCCCcccCcccCcC
Q psy4573         206 AVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGF  243 (306)
Q Consensus       206 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f  243 (306)
                      |.|. |+.   ....+..|.++|+++++|.|..|+..|
T Consensus       120 Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l  153 (160)
T PRK04860        120 YRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETL  153 (160)
T ss_pred             EEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCcee
Confidence            4444 443   333444455555544455555554444

>PRK04860 hypothetical protein; Provisional

Probab=95.89  E-value=0.0042  Score=47.54  Aligned_cols=37  Identities=24%  Similarity=0.551  Sum_probs=25.0

Q ss_pred             ceeccccccccCChHHHHHHHhhccCCCCcccCcCCCccCC
Q psy4573         177 KFECEVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRR  217 (306)
Q Consensus       177 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~  217 (306)
                      +|.|. |+.   ....+.+|.++|.++++|.|..|+..|..
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~  155 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVF  155 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEE
Confidence            67776 766   45556777777777777777777766543

>KOG2785|consensus

Probab=95.59  E-value=0.036  Score=47.62  Aligned_cols=51  Identities=29%  Similarity=0.510  Sum_probs=44.6

Q ss_pred             CcccCcccCcCCChhHHHHHHhhccCCC-----------------------cccCCcch---HhhcChHHHHHHhhh
Q psy4573         233 PYVCEICGKGFTQKQALNTHKRGHTGEI-----------------------PYHCEFCS---ERFSTKALVRHHVRS  283 (306)
Q Consensus       233 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~-----------------------~~~C~~C~---~~f~~~~~l~~H~~~  283 (306)
                      |-.|..|+..+.+...-..||..+|+-.                       -|.|=.|+   +.|......+.||..
T Consensus       166 Pt~CLfC~~~~k~~e~~~~HM~~~HgffIPdreYL~D~~GLl~YLgeKV~~~~~CL~CN~~~~~f~sleavr~HM~~  242 (390)
T KOG2785|consen  166 PTDCLFCDKKSKSLEENLKHMFKEHGFFIPDREYLTDEKGLLKYLGEKVGIGFICLFCNELGRPFSSLEAVRAHMRD  242 (390)
T ss_pred             CcceeecCCCcccHHHHHHHHhhccCCcCCchHhhhchhHHHHHHHHHhccCceEEEeccccCcccccHHHHHHHhh
Confidence            4679999999999999999999888732                       27888899   999999999999976

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=95.57  E-value=0.0035  Score=32.38  Aligned_cols=21  Identities=24%  Similarity=0.828  Sum_probs=10.1

Q ss_pred             ccCCcchHhhcChHHHHHHhh
Q psy4573         262 YHCEFCSERFSTKALVRHHVR  282 (306)
Q Consensus       262 ~~C~~C~~~f~~~~~l~~H~~  282 (306)
                      |.|..|++.|.+...+..|++
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~   22 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMK   22 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTT
T ss_pred             CCcccCCCCcCCHHHHHHHHc
Confidence            344455555555555444443

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=95.53  E-value=0.005  Score=31.80  Aligned_cols=22  Identities=27%  Similarity=0.774  Sum_probs=17.1

Q ss_pred             cccCcccCcCCChhHHHHHHhh
Q psy4573         234 YVCEICGKGFTQKQALNTHKRG  255 (306)
Q Consensus       234 ~~C~~C~~~f~~~~~L~~H~~~  255 (306)
                      |.|..|++.|.+...|..|++.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            6788888888888888877764

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>KOG2231|consensus

Probab=95.32  E-value=0.04  Score=51.40  Aligned_cols=107  Identities=21%  Similarity=0.404  Sum_probs=60.8

Q ss_pred             eccccccccCChHHHHHHHhhccCCCCcccCcCCC---------ccCCcHHHHHHHHHccC-CCC----cccCcccCcCC
Q psy4573         179 ECEVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGK---------GFRRGDALTEHIRIHTG-QRP----YVCEICGKGFT  244 (306)
Q Consensus       179 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~---------~f~~~~~l~~H~~~h~~-~~~----~~C~~C~~~f~  244 (306)
                      .|..| -.|.+...|..|+.--+.  .+.|.+|-.         ...+...|..|+..-.. ++.    -.|..|...|.
T Consensus       117 ~~~~c-~~~~s~~~Lk~H~~~~H~--~~~c~lC~~~~kif~~e~k~Yt~~el~~h~~~gd~d~~s~rGhp~C~~C~~~fl  193 (669)
T KOG2231|consen  117 ECLHC-TEFKSVENLKNHMRDQHK--LHLCSLCLQNLKIFINERKLYTRAELNLHLMFGDPDDESCRGHPLCKFCHERFL  193 (669)
T ss_pred             CCccc-cchhHHHHHHHHHHHhhh--hhccccccccceeeeeeeehehHHHHHHHHhcCCCccccccCCccchhhhhhhc
Confidence            46666 666677778888754321  244444332         22345566677654221 211    35777777788


Q ss_pred             ChhHHHHHHhhccCCCcccC---CcchHhhcChHHHHHHhhhcCCCCC
Q psy4573         245 QKQALNTHKRGHTGEIPYHC---EFCSERFSTKALVRHHVRSHHSSAR  289 (306)
Q Consensus       245 ~~~~L~~H~~~h~~~~~~~C---~~C~~~f~~~~~l~~H~~~~h~~~~  289 (306)
                      ....|.+|++.++-.-.| |   +.++.-|..-..|..|.+.+|.-..
T Consensus       194 d~~el~rH~~~~h~~chf-C~~~~~~neyy~~~~dLe~HfR~~HflCE  240 (669)
T KOG2231|consen  194 DDDELYRHLRFDHEFCHF-CDYKTGQNEYYNDYDDLEEHFRKGHFLCE  240 (669)
T ss_pred             cHHHHHHhhccceeheee-cCcccccchhcccchHHHHHhhhcCcccc
Confidence            888887777755433221 2   2234556667777777777775444

>KOG2482|consensus

Probab=94.64  E-value=0.098  Score=44.21  Aligned_cols=153  Identities=19%  Similarity=0.303  Sum_probs=91.5

Q ss_pred             CccccCcchhhc-cchHHHHHHhhhcCCCCCcccccccccccccccccccC---cceeccccccccCChHHHHHHHhh--
Q psy4573         126 YTAYCDLCQEGF-FRKAKYETHNIQKHNAPPFECESCKKIFTYHKNTTHLG---IKFECEVCHRKLSTKNHLRLHMRT--  199 (306)
Q Consensus       126 ~~~~C~~C~~~~-~~~~~l~~H~~~~h~~~~~~c~~c~~~f~~~~~~~~~~---~~~~C~~C~~~f~~~~~l~~H~~~--  199 (306)
                      ...+|-.|+..+ ...+.+..|+-..|+-..   +.-++...-.....+..   ..+.|-.|.+.|+++..|+.||+.  
T Consensus       143 fslqClFCn~e~lgnRs~~l~Hlf~~H~lni---GlpDniVyvnelLehLkekL~r~~CLyCekifrdkntLkeHMrkK~  219 (423)
T KOG2482|consen  143 FSLQCLFCNNEGLGNRSEILEHLFHVHGLNI---GLPDNIVYVNELLEHLKEKLERLRCLYCEKIFRDKNTLKEHMRKKR  219 (423)
T ss_pred             eeeEEEEecchhcccHHHHHHHHHHHhhhcc---CCCcceeeHHHHHHHHHHHHhhheeeeeccccCCcHHHHHHHHhcc
Confidence            456788888776 457777788777773210   00000000001111111   158899999999999999999987  


Q ss_pred             ccCCCC--------cccCc--CCCccCCcHHHHHHH--HHc---------------cCCCC--cccCcccCcCCChhHHH
Q psy4573         200 HTNERP--------AVCSY--CGKGFRRGDALTEHI--RIH---------------TGQRP--YVCEICGKGFTQKQALN  250 (306)
Q Consensus       200 h~~~~~--------~~C~~--C~~~f~~~~~l~~H~--~~h---------------~~~~~--~~C~~C~~~f~~~~~L~  250 (306)
                      |..-+|        |.=.+  -|++   ......+.  .+.               .+..+  .+|..|.....+...|.
T Consensus       220 HrrinPknreYDkfyiINY~ev~ks---~t~~~~e~dret~~d~~E~D~~wsDw~ed~a~a~~v~CLfC~~~~en~~~l~  296 (423)
T KOG2482|consen  220 HRRINPKNREYDKFYIINYLEVGKS---WTIVHSEDDRETNEDINETDDTWSDWNEDDAEALSVVCLFCTNFYENPVFLF  296 (423)
T ss_pred             CcccCCCccccceEEEEeHhhcCCc---cchhhhhhhhhhhccccccccchhhhhcCCCCccceEEEeeccchhhHHHHH
Confidence            443333        11000  0111   11111111  111               11122  58999999999999999


Q ss_pred             HHHhhccC---------------------------CCcccCCcchHhhcChHHHHHHhhhc
Q psy4573         251 THKRGHTG---------------------------EIPYHCEFCSERFSTKALVRHHVRSH  284 (306)
Q Consensus       251 ~H~~~h~~---------------------------~~~~~C~~C~~~f~~~~~l~~H~~~~  284 (306)
                      .||+..|.                           .+.-.|-.|.-.|-.+..|..||..+
T Consensus       297 eHmk~vHe~Dl~Ki~sd~~Ln~YqrvrviNyiRkq~~~~~c~~cd~~F~~e~~l~~hm~e~  357 (423)
T KOG2482|consen  297 EHMKIVHEFDLLKIQSDYSLNFYQRVRVINYIRKQKKKSRCAECDLSFWKEPGLLIHMVED  357 (423)
T ss_pred             HHHHHHHHhhHHhhccccccchhhhhhHHHHHHHHhhccccccccccccCcchhhhhcccc
Confidence            99987663                           11246999999999999999998653

>KOG2231|consensus

Probab=94.63  E-value=0.092  Score=49.06  Aligned_cols=22  Identities=18%  Similarity=0.264  Sum_probs=11.5

Q ss_pred             cCCCChhhhccHHHHHHHHHhc
Q psy4573         101 KCNQCDHVAKKLAYLQAHMKKH  122 (306)
Q Consensus       101 ~C~~C~~~f~~~~~l~~H~~~~  122 (306)
                      .|..|...|.....|..|++.+
T Consensus       184 ~C~~C~~~fld~~el~rH~~~~  205 (669)
T KOG2231|consen  184 LCKFCHERFLDDDELYRHLRFD  205 (669)
T ss_pred             cchhhhhhhccHHHHHHhhccc
Confidence            3555555555555555555443

>TIGR00622 ssl1 transcription factor ssl1

Probab=94.26  E-value=0.079  Score=37.59  Aligned_cols=76  Identities=22%  Similarity=0.409  Sum_probs=42.1

Q ss_pred             ceeccccccccCChHHHHHHHhhccC--CC------------CcccCcCCCccCCcHHHHHHHHHccCCCCcccCcccCc
Q psy4573         177 KFECEVCHRKLSTKNHLRLHMRTHTN--ER------------PAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEICGKG  242 (306)
Q Consensus       177 ~~~C~~C~~~f~~~~~l~~H~~~h~~--~~------------~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~  242 (306)
                      |..|+.||.+..+...|.+-.  |+-  ..            ...|-.|...|.......  ...-.....|+|+.|...
T Consensus        15 P~~CpiCgLtLVss~HLARSy--HHLfPl~~f~ev~~~~~~~~~~C~~C~~~f~~~~~~~--~~~~~~~~~y~C~~C~~~   90 (112)
T TIGR00622        15 PVECPICGLTLILSTHLARSY--HHLFPLKAFQEIPLEEYNGSRFCFGCQGPFPKPPVSP--FDELKDSHRYVCAVCKNV   90 (112)
T ss_pred             CCcCCcCCCEEeccchHHHhh--hccCCCcccccccccccCCCCcccCcCCCCCCccccc--ccccccccceeCCCCCCc
Confidence            678888988888888776642  210  01            123666776665442111  000122335667777666


Q ss_pred             CCChhHHHHHHhhc
Q psy4573         243 FTQKQALNTHKRGH  256 (306)
Q Consensus       243 f~~~~~L~~H~~~h  256 (306)
                      |-..-++..|...|
T Consensus        91 FC~dCD~fiHe~Lh  104 (112)
T TIGR00622        91 FCVDCDVFVHESLH  104 (112)
T ss_pred             cccccchhhhhhcc
Confidence            66666666665544

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>KOG2785|consensus

Probab=94.15  E-value=0.094  Score=45.12  Aligned_cols=51  Identities=24%  Similarity=0.559  Sum_probs=43.0

Q ss_pred             CcccCcCCCccCCcHHHHHHHHHccCC-----------------------CCcccCccc---CcCCChhHHHHHHhh
Q psy4573         205 PAVCSYCGKGFRRGDALTEHIRIHTGQ-----------------------RPYVCEICG---KGFTQKQALNTHKRG  255 (306)
Q Consensus       205 ~~~C~~C~~~f~~~~~l~~H~~~h~~~-----------------------~~~~C~~C~---~~f~~~~~L~~H~~~  255 (306)
                      |-.|-.|+..+.+-.....|+..+++-                       ..+.|..|+   +.|.+....+.||..
T Consensus       166 Pt~CLfC~~~~k~~e~~~~HM~~~HgffIPdreYL~D~~GLl~YLgeKV~~~~~CL~CN~~~~~f~sleavr~HM~~  242 (390)
T KOG2785|consen  166 PTDCLFCDKKSKSLEENLKHMFKEHGFFIPDREYLTDEKGLLKYLGEKVGIGFICLFCNELGRPFSSLEAVRAHMRD  242 (390)
T ss_pred             CcceeecCCCcccHHHHHHHHhhccCCcCCchHhhhchhHHHHHHHHHhccCceEEEeccccCcccccHHHHHHHhh
Confidence            356999999999999999999887652                       347898998   999999999999964

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=94.02  E-value=0.038  Score=27.89  Aligned_cols=20  Identities=20%  Similarity=0.647  Sum_probs=11.9

Q ss_pred             ccCCcchHhhcChHHHHHHhh
Q psy4573         262 YHCEFCSERFSTKALVRHHVR  282 (306)
Q Consensus       262 ~~C~~C~~~f~~~~~l~~H~~  282 (306)
                      ..|++|++.| ..+.|..|+.
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~   22 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEK   22 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHH
Confidence            3566666666 5555666654

>KOG2482|consensus

Probab=93.92  E-value=0.087  Score=44.52  Aligned_cols=50  Identities=22%  Similarity=0.403  Sum_probs=33.3

Q ss_pred             cccccccccc-CChHHHHHHhhhcCC------C----------------CceecccchhccCChHHHhhhhhh
Q psy4573          44 LACNVCSKRC-GSKSGLKIHMKSHTL------S----------------KRYACSICLAEFHTLTEKDRHTLS   93 (306)
Q Consensus        44 ~~C~~C~~~f-~~~~~l~~H~~~h~~------~----------------~~~~C~~C~~~~~~~~~l~~H~~~   93 (306)
                      ..|-.|...+ ..++....|+-..++      +                ..+.|-+|.+.|..+..|..||+.
T Consensus       145 lqClFCn~e~lgnRs~~l~Hlf~~H~lniGlpDniVyvnelLehLkekL~r~~CLyCekifrdkntLkeHMrk  217 (423)
T KOG2482|consen  145 LQCLFCNNEGLGNRSEILEHLFHVHGLNIGLPDNIVYVNELLEHLKEKLERLRCLYCEKIFRDKNTLKEHMRK  217 (423)
T ss_pred             eEEEEecchhcccHHHHHHHHHHHhhhccCCCcceeeHHHHHHHHHHHHhhheeeeeccccCCcHHHHHHHHh
Confidence            5688887766 445555566543211      1                147888888888888888888875

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=93.53  E-value=0.096  Score=37.51  Aligned_cols=25  Identities=32%  Similarity=0.648  Sum_probs=23.3

Q ss_pred             ccC----CcchHhhcChHHHHHHhhhcCC
Q psy4573         262 YHC----EFCSERFSTKALVRHHVRSHHS  286 (306)
Q Consensus       262 ~~C----~~C~~~f~~~~~l~~H~~~~h~  286 (306)
                      |.|    ..|++...+...|..|++.+|+
T Consensus        81 ~~C~~~~~~C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   81 YRCQCDPPHCGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             eeeecCCCCCCcEeccHHHHHHHHHHhcC
Confidence            889    9999999999999999999885

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=93.38  E-value=0.12  Score=43.79  Aligned_cols=135  Identities=26%  Similarity=0.475  Sum_probs=70.6

Q ss_pred             ccccCc--chhhccchHHHHHHhhhcCCCCCcccccc---cccccccccccccCcceeccccccccCChHHHHHHHhhcc
Q psy4573         127 TAYCDL--CQEGFFRKAKYETHNIQKHNAPPFECESC---KKIFTYHKNTTHLGIKFECEVCHRKLSTKNHLRLHMRTHT  201 (306)
Q Consensus       127 ~~~C~~--C~~~~~~~~~l~~H~~~~h~~~~~~c~~c---~~~f~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  201 (306)
                      .|.||.  |.........|..|.+..|+.  +.|.+|   .+.|+..                ...-.+..|..|...-.
T Consensus       151 ~F~CP~skc~~~C~~~k~lk~H~K~~H~~--~~C~~C~~nKk~F~~E----------------~~lF~~~~Lr~H~~~G~  212 (493)
T COG5236         151 SFKCPKSKCHRRCGSLKELKKHYKAQHGF--VLCSECIGNKKDFWNE----------------IRLFRSSTLRDHKNGGL  212 (493)
T ss_pred             HhcCCchhhhhhhhhHHHHHHHHHhhcCc--EEhHhhhcCcccCccc----------------eeeeecccccccccCCc
Confidence            467764  777777777788887777753  334433   3333321                11222334555554433


Q ss_pred             CCCCc----ccCcCCCccCCcHHHHHHHHHccCCCCcccCcccC-------cCCChhHHHHHHhhccCCCcccCCc--ch
Q psy4573         202 NERPA----VCSYCGKGFRRGDALTEHIRIHTGQRPYVCEICGK-------GFTQKQALNTHKRGHTGEIPYHCEF--CS  268 (306)
Q Consensus       202 ~~~~~----~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~-------~f~~~~~L~~H~~~h~~~~~~~C~~--C~  268 (306)
                      .+..|    .|..|...|.+...|..|.+.-+ +   +|-+|+.       -|.+...|..|-+.-|    |.|..  |-
T Consensus       213 ~e~GFKGHP~C~FC~~~FYdDDEL~~HcR~~H-E---~ChICD~v~p~~~QYFK~Y~~Le~HF~~~h----y~ct~qtc~  284 (493)
T COG5236         213 EEEGFKGHPLCIFCKIYFYDDDELRRHCRLRH-E---ACHICDMVGPIRYQYFKSYEDLEAHFRNAH----YCCTFQTCR  284 (493)
T ss_pred             cccCcCCCchhhhccceecChHHHHHHHHhhh-h---hhhhhhccCccchhhhhCHHHHHHHhhcCc----eEEEEEEEe
Confidence            22222    36666666666666666665432 2   2333332       2555666666654211    33322  21


Q ss_pred             ----HhhcChHHHHHHhhhcCCC
Q psy4573         269 ----ERFSTKALVRHHVRSHHSS  287 (306)
Q Consensus       269 ----~~f~~~~~l~~H~~~~h~~  287 (306)
                          +.|.....|..|+...|+.
T Consensus       285 ~~k~~vf~~~~el~~h~~~~h~~  307 (493)
T COG5236         285 VGKCYVFPYHTELLEHLTRFHKV  307 (493)
T ss_pred             cCcEEEeccHHHHHHHHHHHhhc
Confidence                3567777777777776664

>KOG1146|consensus

Probab=92.50  E-value=0.041  Score=54.62  Aligned_cols=56  Identities=25%  Similarity=0.462  Sum_probs=46.7

Q ss_pred             ccCCCCcccCcccCcCCChhHHHHHHhhcc-------------------------CCCcccCCcchHhhcChHHHHHHhh
Q psy4573         228 HTGQRPYVCEICGKGFTQKQALNTHKRGHT-------------------------GEIPYHCEFCSERFSTKALVRHHVR  282 (306)
Q Consensus       228 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-------------------------~~~~~~C~~C~~~f~~~~~l~~H~~  282 (306)
                      +...+.|+|+.|+..|.....|..|++..+                         +.++|.|..|.++++...+|..|++
T Consensus       460 ~S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p~~C~~C~~stttng~Lsihlq  539 (1406)
T KOG1146|consen  460 HSFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKPYPCRACNYSTTTNGNLSIHLQ  539 (1406)
T ss_pred             ecccccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCcccceeeeeeeecchHHHHHHH
Confidence            444577899999999999999999998733                         2346999999999999999999986


Q ss_pred             h
Q psy4573         283 S  283 (306)
Q Consensus       283 ~  283 (306)
                      .
T Consensus       540 S  540 (1406)
T KOG1146|consen  540 S  540 (1406)
T ss_pred             H
Confidence            5

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=92.27  E-value=0.092  Score=28.50  Aligned_cols=10  Identities=40%  Similarity=0.952  Sum_probs=4.4

Q ss_pred             cccCcCCCcc
Q psy4573         206 AVCSYCGKGF  215 (306)
Q Consensus       206 ~~C~~C~~~f  215 (306)
                      |.|..||..+
T Consensus         2 ~~C~~CGy~y   11 (33)
T cd00350           2 YVCPVCGYIY   11 (33)
T ss_pred             EECCCCCCEE
Confidence            3444444443

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>smart00451 ZnF_U1 U1-like zinc finger

Probab=92.02  E-value=0.13  Score=28.15  Aligned_cols=23  Identities=17%  Similarity=0.548  Sum_probs=15.1

Q ss_pred             cccccccccccCChHHHHHHhhh
Q psy4573          43 SLACNVCSKRCGSKSGLKIHMKS   65 (306)
Q Consensus        43 ~~~C~~C~~~f~~~~~l~~H~~~   65 (306)
                      +|.|..|+..|.+...+..|+..
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            46677777777766666666543

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>smart00451 ZnF_U1 U1-like zinc finger

Probab=91.99  E-value=0.15  Score=27.84  Aligned_cols=23  Identities=17%  Similarity=0.603  Sum_probs=16.3

Q ss_pred             ceeccccccccCChHHHHHHHhh
Q psy4573         177 KFECEVCHRKLSTKNHLRLHMRT  199 (306)
Q Consensus       177 ~~~C~~C~~~f~~~~~l~~H~~~  199 (306)
                      +|.|.+|+..|.+...+..|+..
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            46677777777777777777653

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>TIGR00622 ssl1 transcription factor ssl1

Probab=91.76  E-value=0.46  Score=33.77  Aligned_cols=21  Identities=10%  Similarity=0.309  Sum_probs=12.8

Q ss_pred             CccccCcchhhccchHHHHHH
Q psy4573         126 YTAYCDLCQEGFFRKAKYETH  146 (306)
Q Consensus       126 ~~~~C~~C~~~~~~~~~l~~H  146 (306)
                      -|..|+.|+-.......|.+.
T Consensus        14 LP~~CpiCgLtLVss~HLARS   34 (112)
T TIGR00622        14 LPVECPICGLTLILSTHLARS   34 (112)
T ss_pred             CCCcCCcCCCEEeccchHHHh
Confidence            356677777666666555543

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>KOG2893|consensus

Probab=91.55  E-value=0.058  Score=43.12  Aligned_cols=42  Identities=26%  Similarity=0.508  Sum_probs=33.3

Q ss_pred             eccccccccCChHHHHHHHhhccCCCCcccCcCCCccCCcHHHHHH
Q psy4573         179 ECEVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGDALTEH  224 (306)
Q Consensus       179 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H  224 (306)
                      =|..|++.|.+..-|..|++.-+    |+|.+|.+...+-..|..|
T Consensus        12 wcwycnrefddekiliqhqkakh----fkchichkkl~sgpglsih   53 (341)
T KOG2893|consen   12 WCWYCNREFDDEKILIQHQKAKH----FKCHICHKKLFSGPGLSIH   53 (341)
T ss_pred             eeeecccccchhhhhhhhhhhcc----ceeeeehhhhccCCCceee
Confidence            38889999999998988886543    8899998887776666666

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=91.18  E-value=0.13  Score=31.00  Aligned_cols=31  Identities=26%  Similarity=0.410  Sum_probs=21.6

Q ss_pred             ccCCCcccCCcchHhhcChHHHHHHhhhcCC
Q psy4573         256 HTGEIPYHCEFCSERFSTKALVRHHVRSHHS  286 (306)
Q Consensus       256 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~  286 (306)
                      -.|+..++|+-|+..|....+..+|+..-|+
T Consensus        12 RDGE~~lrCPRC~~~FR~~K~Y~RHVNKaH~   42 (65)
T COG4049          12 RDGEEFLRCPRCGMVFRRRKDYIRHVNKAHG   42 (65)
T ss_pred             cCCceeeeCCchhHHHHHhHHHHHHhhHHhh
Confidence            3456667777777777777777777766554

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=90.50  E-value=0.054  Score=48.83  Aligned_cols=121  Identities=29%  Similarity=0.490  Sum_probs=86.5

Q ss_pred             cceeccccccccCChHHHHHHHh--hccCC--CCcccC--cCCCccCCcHHHHHHHHHccCCCCcccCc-----------
Q psy4573         176 IKFECEVCHRKLSTKNHLRLHMR--THTNE--RPAVCS--YCGKGFRRGDALTEHIRIHTGQRPYVCEI-----------  238 (306)
Q Consensus       176 ~~~~C~~C~~~f~~~~~l~~H~~--~h~~~--~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~-----------  238 (306)
                      .++.|..|...|.....+..|.+  .|.++  +++.|+  .|++.|.....+..|...|.+..++.+..           
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  367 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEKLLNSSSKFSPLL  367 (467)
T ss_pred             cCCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCccccccccCcccccccc
Confidence            36889999999999999999999  79999  899999  79999999999999999887665544422           


Q ss_pred             --------------------------ccCcCCChhHHHHHHhhccCCC--cccCCcchHhhcChHHHHHHhhhcCCCCCC
Q psy4573         239 --------------------------CGKGFTQKQALNTHKRGHTGEI--PYHCEFCSERFSTKALVRHHVRSHHSSARL  290 (306)
Q Consensus       239 --------------------------C~~~f~~~~~L~~H~~~h~~~~--~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~  290 (306)
                                                |-..+.....+..|...|....  .+.+..|...|.....+..|++.+.-..++
T Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  447 (467)
T COG5048         368 NNEPPQSLQQYKDLKNDKKSETLSNSCIRNFKRDSNLSLHIITHLSFRPYNCKNPPCSKSFNRHYNLIPHKKIHTNHAPL  447 (467)
T ss_pred             CCCCccchhhccCccCCccccccccchhhhhccccccccccccccccCCcCCCCCcchhhccCcccccccccccccCCce
Confidence                                      2222333333333333333322  356777888888888888888887777665


Q ss_pred             Cccccc
Q psy4573         291 GLNLLD  296 (306)
Q Consensus       291 ~C~~c~  296 (306)
                      -|..+.
T Consensus       448 ~~~~~~  453 (467)
T COG5048         448 LCSILK  453 (467)
T ss_pred             eecccc
Confidence            554443

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=90.11  E-value=0.53  Score=33.64  Aligned_cols=71  Identities=23%  Similarity=0.413  Sum_probs=45.9

Q ss_pred             ceeccccccccCChHHHHHHHhh-ccCCCCcccCcCCCccCCcHHHHHHHHHcc--------------C---------CC
Q psy4573         177 KFECEVCHRKLSTKNHLRLHMRT-HTNERPAVCSYCGKGFRRGDALTEHIRIHT--------------G---------QR  232 (306)
Q Consensus       177 ~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~--------------~---------~~  232 (306)
                      ...|..|+..... +.+..|++. |+......          ...+..-++.-.              +         -.
T Consensus        11 vlIC~~C~~av~~-~~v~~HL~~~H~~~~~~~----------~~~i~~~~~~~~~l~~~~~~~~~p~~~~~Pi~gLp~~~   79 (109)
T PF12013_consen   11 VLICRQCQYAVQP-SEVESHLRKRHHILKSQE----------RQRIVEAIRQWPDLLPDPDDLQIPPDPSPPIPGLPVYD   79 (109)
T ss_pred             EEEeCCCCcccCc-hHHHHHHHHhcccccHHH----------HHHHHHHHHhhhhcccCccccCCCCCCCCcCCCCCCCC
Confidence            5789999988777 789999985 43321110          011111111100              0         12


Q ss_pred             Cccc----CcccCcCCChhHHHHHHhhccC
Q psy4573         233 PYVC----EICGKGFTQKQALNTHKRGHTG  258 (306)
Q Consensus       233 ~~~C----~~C~~~f~~~~~L~~H~~~h~~  258 (306)
                      .|.|    ..|++.+.+...|..|++.+||
T Consensus        80 G~~C~~~~~~C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   80 GYRCQCDPPHCGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             CeeeecCCCCCCcEeccHHHHHHHHHHhcC
Confidence            3899    9999999999999999998775

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>KOG4173|consensus

Probab=88.94  E-value=0.25  Score=38.67  Aligned_cols=78  Identities=24%  Similarity=0.440  Sum_probs=60.9

Q ss_pred             ceeccc--chhccCChHHHhhhhhhcccCCcccCCCChhhhccHHHHHHHHHhc----------ccCCccccC--cchhh
Q psy4573          71 RYACSI--CLAEFHTLTEKDRHTLSHVVEGEYKCNQCDHVAKKLAYLQAHMKKH----------RNEYTAYCD--LCQEG  136 (306)
Q Consensus        71 ~~~C~~--C~~~~~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~----------~~~~~~~C~--~C~~~  136 (306)
                      .+.|++  |...|.+.+....|...-++   ..|.+|.+.|++...|..|+...          .+.-.|+|-  .|+..
T Consensus        79 ~~~cqvagc~~~~d~lD~~E~hY~~~h~---~sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgCt~K  155 (253)
T KOG4173|consen   79 AFACQVAGCCQVFDALDDYEHHYHTLHG---NSCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGCTEK  155 (253)
T ss_pred             cccccccchHHHHhhhhhHHHhhhhccc---chhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhhhhh
Confidence            477877  77788888888888765544   36889999999988888887543          235568884  59999


Q ss_pred             ccchHHHHHHhhhcC
Q psy4573         137 FFRKAKYETHNIQKH  151 (306)
Q Consensus       137 ~~~~~~l~~H~~~~h  151 (306)
                      |.+...-..|+...|
T Consensus       156 FkT~r~RkdH~I~~H  170 (253)
T KOG4173|consen  156 FKTSRDRKDHMIRMH  170 (253)
T ss_pred             hhhhhhhhhHHHHhc
Confidence            999999999988887

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=87.43  E-value=0.28  Score=29.58  Aligned_cols=26  Identities=12%  Similarity=0.257  Sum_probs=20.6

Q ss_pred             cceeccccccccCChHHHHHHHhhcc
Q psy4573         176 IKFECEVCHRKLSTKNHLRLHMRTHT  201 (306)
Q Consensus       176 ~~~~C~~C~~~f~~~~~l~~H~~~h~  201 (306)
                      .-++||.|+..|....+..+|....+
T Consensus        16 ~~lrCPRC~~~FR~~K~Y~RHVNKaH   41 (65)
T COG4049          16 EFLRCPRCGMVFRRRKDYIRHVNKAH   41 (65)
T ss_pred             eeeeCCchhHHHHHhHHHHHHhhHHh
Confidence            36788888888888888888887643

>KOG2893|consensus

Probab=86.10  E-value=0.2  Score=40.21  Aligned_cols=38  Identities=29%  Similarity=0.724  Sum_probs=16.6

Q ss_pred             cCcCCCccCCcHHHHHHHHHccCCCCcccCcccCcCCChhHH
Q psy4573         208 CSYCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQAL  249 (306)
Q Consensus       208 C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L  249 (306)
                      |=+|++.|.+...|.+|++-    +-|+|.+|.+..-+-..|
T Consensus        13 cwycnrefddekiliqhqka----khfkchichkkl~sgpgl   50 (341)
T KOG2893|consen   13 CWYCNREFDDEKILIQHQKA----KHFKCHICHKKLFSGPGL   50 (341)
T ss_pred             eeecccccchhhhhhhhhhh----ccceeeeehhhhccCCCc
Confidence            34445555554444444432    224444444443333333

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=85.82  E-value=0.63  Score=33.10  Aligned_cols=31  Identities=35%  Similarity=0.722  Sum_probs=19.1

Q ss_pred             ceeccccccccCChHHHHHHHhhccCCCCcccCcCCCccCCc
Q psy4573         177 KFECEVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRG  218 (306)
Q Consensus       177 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~  218 (306)
                      +..|+.||..|-..           ++.|..|+.||..|.-.
T Consensus         9 KR~Cp~CG~kFYDL-----------nk~PivCP~CG~~~~~~   39 (108)
T PF09538_consen    9 KRTCPSCGAKFYDL-----------NKDPIVCPKCGTEFPPE   39 (108)
T ss_pred             cccCCCCcchhccC-----------CCCCccCCCCCCccCcc
Confidence            45566666666552           34666777777666544

The function of members of this family is unknown.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=85.78  E-value=0.25  Score=44.50  Aligned_cols=59  Identities=25%  Similarity=0.323  Sum_probs=46.4

Q ss_pred             hhcCCcccccccccccCChHHHHHHhhhcCCCCceecccch--hccCChHHHhhhhhhccc
Q psy4573          38 VEQDGSLACNVCSKRCGSKSGLKIHMKSHTLSKRYACSICL--AEFHTLTEKDRHTLSHVV   96 (306)
Q Consensus        38 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~--~~~~~~~~l~~H~~~~~~   96 (306)
                      ......+.|+.|...|........|...+..+.++.|...+  ..+.....+..|...+..
T Consensus        28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (467)
T COG5048          28 SNAPRPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCSYSGCDKSFSRPLELSRHLRTHHN   88 (467)
T ss_pred             ccCCchhhcccccccccccchhhhhcccccccCCccccccccccccCCcchhhhhcccccc
Confidence            44566788999999999999999999999999999998854  455566666666665543

>KOG4173|consensus

Probab=85.52  E-value=0.39  Score=37.66  Aligned_cols=76  Identities=29%  Similarity=0.600  Sum_probs=48.8

Q ss_pred             ceeccc--cccccCChHHHHHHHhhccCCCCcccCcCCCccCCcHHHHHHHH-Hc---------cCCCCcccC--cccCc
Q psy4573         177 KFECEV--CHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGDALTEHIR-IH---------TGQRPYVCE--ICGKG  242 (306)
Q Consensus       177 ~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h---------~~~~~~~C~--~C~~~  242 (306)
                      .+.|+.  |...|.+..++..|..+-++   -.|..|.+.|.+...|..|+. .|         .|...|.|-  .|+..
T Consensus        79 ~~~cqvagc~~~~d~lD~~E~hY~~~h~---~sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgCt~K  155 (253)
T KOG4173|consen   79 AFACQVAGCCQVFDALDDYEHHYHTLHG---NSCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGCTEK  155 (253)
T ss_pred             cccccccchHHHHhhhhhHHHhhhhccc---chhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhhhhh
Confidence            466765  66777777777777655332   357777777777777777764 23         234557773  37777


Q ss_pred             CCChhHHHHHHhh
Q psy4573         243 FTQKQALNTHKRG  255 (306)
Q Consensus       243 f~~~~~L~~H~~~  255 (306)
                      |.+...-..|+-.
T Consensus       156 FkT~r~RkdH~I~  168 (253)
T KOG4173|consen  156 FKTSRDRKDHMIR  168 (253)
T ss_pred             hhhhhhhhhHHHH
Confidence            7777777777643

>cd00729 rubredoxin_SM Rubredoxin, Small Modular nonheme iron binding domain containing a [Fe(SCys)4] center, present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase

Probab=85.28  E-value=0.49  Score=25.81  Aligned_cols=10  Identities=40%  Similarity=0.733  Sum_probs=4.9

Q ss_pred             cccCcCCCcc
Q psy4573         206 AVCSYCGKGF  215 (306)
Q Consensus       206 ~~C~~C~~~f  215 (306)
                      |.|..||..+
T Consensus         3 ~~C~~CG~i~   12 (34)
T cd00729           3 WVCPVCGYIH   12 (34)
T ss_pred             EECCCCCCEe
Confidence            4455555444

In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>PHA00626 hypothetical protein

Probab=83.91  E-value=0.83  Score=27.70  Aligned_cols=14  Identities=21%  Similarity=0.411  Sum_probs=7.8

Q ss_pred             ceeccccccccCCh
Q psy4573         177 KFECEVCHRKLSTK  190 (306)
Q Consensus       177 ~~~C~~C~~~f~~~  190 (306)
                      .|.|+.||+.|...
T Consensus        23 rYkCkdCGY~ft~~   36 (59)
T PHA00626         23 DYVCCDCGYNDSKD   36 (59)
T ss_pred             ceEcCCCCCeechh
Confidence            46666666655443

>PF13717 zinc_ribbon_4: zinc-ribbon domain

Probab=83.32  E-value=0.78  Score=25.41  Aligned_cols=11  Identities=27%  Similarity=0.748  Sum_probs=5.9

Q ss_pred             ceecccccccc
Q psy4573         177 KFECEVCHRKL  187 (306)
Q Consensus       177 ~~~C~~C~~~f  187 (306)
                      ..+|+.|+..|
T Consensus        25 ~v~C~~C~~~f   35 (36)
T PF13717_consen   25 KVRCSKCGHVF   35 (36)
T ss_pred             EEECCCCCCEe
Confidence            45555555544

>PF10571 UPF0547: Uncharacterised protein family UPF0547; InterPro: IPR018886 This domain may well be a type of zinc-finger as it carries two pairs of highly conserved cysteine residues though with no accompanying histidines

Probab=83.26  E-value=0.78  Score=23.31  Aligned_cols=8  Identities=50%  Similarity=1.364  Sum_probs=3.1

Q ss_pred             cCcCCCcc
Q psy4573         208 CSYCGKGF  215 (306)
Q Consensus       208 C~~C~~~f  215 (306)
                      |+.||..|
T Consensus        17 Cp~CG~~F   24 (26)
T PF10571_consen   17 CPHCGYDF   24 (26)
T ss_pred             CCCCCCCC
Confidence            33333333

Several members are annotated as putative helicases.

>PF09723 Zn-ribbon_8: Zinc ribbon domain; InterPro: IPR013429 This entry represents a region of about 41 amino acids found in a number of small proteins in a wide range of bacteria

Probab=82.90  E-value=0.7  Score=26.60  Aligned_cols=29  Identities=21%  Similarity=0.587  Sum_probs=12.6

Q ss_pred             cccccccccccccccccccCcceecccccc
Q psy4573         156 FECESCKKIFTYHKNTTHLGIKFECEVCHR  185 (306)
Q Consensus       156 ~~c~~c~~~f~~~~~~~~~~~~~~C~~C~~  185 (306)
                      |.|..||..|........ ...-.|+.||.
T Consensus         6 y~C~~Cg~~fe~~~~~~~-~~~~~CP~Cg~   34 (42)
T PF09723_consen    6 YRCEECGHEFEVLQSISE-DDPVPCPECGS   34 (42)
T ss_pred             EEeCCCCCEEEEEEEcCC-CCCCcCCCCCC
Confidence            344444444443333222 33445555554

The region usually begins with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One protein in this entry has been noted as a putative regulatory protein, designated FmdB []. Most proteins in this entry have a C-terminal region containing highly degenerate sequence.

>PF13719 zinc_ribbon_5: zinc-ribbon domain

Probab=82.15  E-value=0.8  Score=25.53  Aligned_cols=11  Identities=27%  Similarity=0.727  Sum_probs=5.7

Q ss_pred             ceecccccccc
Q psy4573         177 KFECEVCHRKL  187 (306)
Q Consensus       177 ~~~C~~C~~~f  187 (306)
                      ..+|+.|+..|
T Consensus        25 ~vrC~~C~~~f   35 (37)
T PF13719_consen   25 KVRCPKCGHVF   35 (37)
T ss_pred             EEECCCCCcEe
Confidence            45555555444

>PRK14890 putative Zn-ribbon RNA-binding protein; Provisional

Probab=81.51  E-value=0.85  Score=28.16  Aligned_cols=10  Identities=40%  Similarity=1.009  Sum_probs=5.6

Q ss_pred             CCcccCcCCC
Q psy4573         204 RPAVCSYCGK  213 (306)
Q Consensus       204 ~~~~C~~C~~  213 (306)
                      ++|.|+.||.
T Consensus        47 ~~Y~CP~CGF   56 (59)
T PRK14890         47 NPYTCPKCGF   56 (59)
T ss_pred             CceECCCCCC
Confidence            4566666654

>TIGR02098 MJ0042_CXXC MJ0042 family finger-like domain

Probab=80.49  E-value=0.97  Score=25.22  Aligned_cols=9  Identities=22%  Similarity=0.685  Sum_probs=4.0

Q ss_pred             eeccccccc
Q psy4573         178 FECEVCHRK  186 (306)
Q Consensus       178 ~~C~~C~~~  186 (306)
                      ..|+.|+..
T Consensus        26 v~C~~C~~~   34 (38)
T TIGR02098        26 VRCGKCGHV   34 (38)
T ss_pred             EECCCCCCE
Confidence            444444443

This domain contains a CXXCX(19)CXXC motif suggestive of both zinc fingers and thioredoxin, usually found at the N-terminus of prokaryotic proteins. One partially characterized gene, agmX, is among a large set in Myxococcus whose interruption affects adventurous gliding motility.

>smart00834 CxxC_CXXC_SSSS Putative regulatory protein

Probab=80.31  E-value=0.99  Score=25.56  Aligned_cols=9  Identities=22%  Similarity=0.508  Sum_probs=4.4

Q ss_pred             ceecccccc
Q psy4573         177 KFECEVCHR  185 (306)
Q Consensus       177 ~~~C~~C~~  185 (306)
                      ...|+.||.
T Consensus        26 ~~~CP~Cg~   34 (41)
T smart00834       26 LATCPECGG   34 (41)
T ss_pred             CCCCCCCCC
Confidence            344555554

CxxC_CXXC_SSSS represents a region of about 41 amino acids found in a number of small proteins in a wide range of bacteria. The region usually begins with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One protein in this entry has been noted as a putative regulatory protein, designated FmdB. Most proteins in this entry have a C-terminal region containing highly degenerate sequence.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	306
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		4e-25
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		6e-16
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		5e-15
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		7e-15
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		9e-15
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		1e-14
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		2e-14
2ee8_A	106	Solution Structure Of Three Zf-C2h2 Domains From Mo		3e-14
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		3e-14
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		5e-14
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		6e-14
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		6e-14
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		1e-13
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		1e-13
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		1e-13
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		3e-13
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		1e-11
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		8e-05
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		3e-11
2wbs_A	89	Crystal Structure Of The Zinc Finger Domain Of Klf4		5e-11
2wbu_A	90	Crystal Structure Of The Zinc Finger Domain Of Klf4		6e-11
1ubd_C	124	Co-Crystal Structure Of Human Yy1 Zinc Finger Domai		1e-10
2rpc_A	155	Solution Structure Of The Tandem Zf-C2h2 Domains Fr		2e-10
2ebt_A	100	Solution Structure Of Three Tandem Repeats Of Zf-C2		5e-10
1f2i_G	73	Cocrystal Structure Of Selected Zinc Finger Dimer B		1e-09
1x6e_A	72	Solution Structures Of The C2h2 Type Zinc Finger Do		1e-09
2csh_A	110	Solution Structure Of Tandem Repeat Of The Zf-C2h2		1e-08
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		3e-08
2lce_A	74	Chemical Shift Assignment Of Hr4436b From Homo Sapi		7e-08
1llm_C	88	Crystal Structure Of A Zif23-Gcn4 Chimera Bound To		1e-07
2adr_A	60	Adr1 Dna-Binding Domain From Saccharomyces Cerevisi		2e-07
2adr_A	60	Adr1 Dna-Binding Domain From Saccharomyces Cerevisi		5e-04
2lt7_A	133	Solution Nmr Structure Of Kaiso Zinc Finger Dna Bin		2e-07
2gli_A	155	Five-Finger GliDNA COMPLEX Length = 155		8e-07
3uk3_C	57	Crystal Structure Of Znf217 Bound To Dna Length = 5		9e-07
4gzn_C	60	Mouse Zfp57 Zinc Fingers In Complex With Methylated		1e-06
1tf3_A	92	Tfiiia Finger 1-3 Bound To Dna, Nmr, 22 Structures		2e-06
1tf6_A	190	Co-crystal Structure Of Xenopus Tfiiia Zinc Finger		7e-06
2ysv_A	42	Solution Structure Of C2h2 Type Zinc Finger Domain		1e-04
2yts_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		3e-04
2emh_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		8e-04
1x6h_A	86	Solution Structures Of The C2h2 Type Zinc Finger Do		8e-04
2eps_A	54	Solution Structure Of The 4th Zinc Finger Domain Of		9e-04

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score =  111 bits (278), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 64/168 (38%), Positives = 81/168 (48%), Gaps = 6/168 (3%)
Query: 97  EGEYKCNQCDHVAKKLAYLQAHMKKHRNEYTAYCDLCQEGFFRKAKYETHNIQKHNAPPF 156
           E  Y C +C     +  +L  H + H  E    C  C + F  K     H        P+
Sbjct: 19  EKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPY 78
Query: 157 ECESCKKIFTYHKNT-----THLGIK-FECEVCHRKLSTKNHLRLHMRTHTNERPAVCSY 210
           +C  C K F+   N      TH G K + C  C +  S   HLR H RTHT E+P  C  
Sbjct: 79  KCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPE 138
Query: 211 CGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTG 258
           CGK F R D L  H R HTG++PY C  CGK F+++ ALN H+R HTG
Sbjct: 139 CGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTG 186

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 81.3 bits (199), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 37/73 (50%), Positives = 45/73 (61%)
Query: 202 NERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIP 261
            E+P  C  CGK F R D L EH R HTG++PY C  CGK F+ K+ L  H+R HTGE P
Sbjct: 18  GEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKP 77
Query: 262 YHCEFCSERFSTK 274
           Y C  C + FS +
Sbjct: 78  YKCPECGKSFSQR 90

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 78.6 bits (192), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 33/81 (40%), Positives = 50/81 (61%)
Query: 178 FECEVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCE 237
           F+C++C +     + L  H+  H++ RP  C YCGK F +   + +H  IHTG++P+ C+
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61
Query: 238 ICGKGFTQKQALNTHKRGHTG 258
           +CGK F+Q   L TH R HTG
Sbjct: 62  VCGKAFSQSSNLITHSRKHTG 82

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 77.8 bits (190), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 35/72 (48%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
Query: 203 ERPAVCSY--CGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEI 260
           ERP  C    C + F R D LT HIRIHTGQ+P+ C IC + F++   L TH R HTGE 
Sbjct: 2   ERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 261 PYHCEFCSERFS 272
           P+ C+ C  +F+
Sbjct: 62  PFACDICGRKFA 73

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 77.4 bits (189), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 35/72 (48%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
Query: 203 ERPAVCSY--CGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEI 260
           ERP  C    C + F R D LT HIRIHTGQ+P+ C IC + F++   L TH R HTGE 
Sbjct: 1   ERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 60
Query: 261 PYHCEFCSERFS 272
           P+ C+ C  +F+
Sbjct: 61  PFACDICGRKFA 72

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 77.4 bits (189), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 35/72 (48%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
Query: 203 ERPAVCSY--CGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEI 260
           ERP  C    C + F R D LT HIRIHTGQ+P+ C IC + F++   L TH R HTGE 
Sbjct: 2   ERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 261 PYHCEFCSERFS 272
           P+ C+ C  +F+
Sbjct: 62  PFACDICGRKFA 73

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 34/73 (46%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Query: 203 ERPAVCSY--CGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEI 260
           ERP  C    C + F +   L  HIRIHTGQ+P+ C IC + F+Q+ +LN H R HTGE 
Sbjct: 2   ERPYACPVESCDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQQASLNAHIRTHTGEK 61
Query: 261 PYHCEFCSERFST 273
           P+ C+ C  +F+T
Sbjct: 62  PFACDICGRKFAT 74

>pdb|2EE8|A Chain A, Solution Structure Of Three Zf-C2h2 Domains From Mouse Protein Odd-Skipped-Related 2 Splicing Isoform 2 Length = 106

Iteration: 1
 Score = 75.9 bits (185), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 36/80 (45%), Positives = 49/80 (61%)
Query: 177 KFECEVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVC 236
           +F C+ C R  +   +L +H RTHT+ERP  C  C K FRR D L +H  IH+ ++P+ C
Sbjct: 17  EFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKC 76
Query: 237 EICGKGFTQKQALNTHKRGH 256
           + CGKGF Q + L  HK  H
Sbjct: 77  QECGKGFCQSRTLAVHKTLH 96

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 75.5 bits (184), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 34/70 (48%), Positives = 42/70 (60%)
Query: 203 ERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPY 262
           E+P  C  CGK F +   L +H R HTG++PY C  CGK F+Q   L  H+R HTGE PY
Sbjct: 2   EKPYKCPECGKSFSQSSNLQKHQRTHTGEKPYKCPECGKSFSQSSDLQKHQRTHTGEKPY 61
Query: 263 HCEFCSERFS 272
            C  C + FS
Sbjct: 62  KCPECGKSFS 71

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 75.1 bits (183), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 37/99 (37%), Positives = 57/99 (57%), Gaps = 3/99 (3%)
Query: 179 ECEVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGDALTEHIR---IHTGQRPYV 235
           EC  CH+K  +K +L++H R HT E+P  C  CGK + R + L EH     ++  ++ + 
Sbjct: 9   ECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFT 68
Query: 236 CEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTK 274
           C +C + F ++  L  H   HTGE+PY C  CS++F  K
Sbjct: 69  CSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQK 107

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 74.7 bits (182), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 34/72 (47%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 203 ERPAVCSY--CGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEI 260
           ERP  C    C + F R   LT HIRIHTGQ+P+ C IC + F++   L TH R HTGE 
Sbjct: 2   ERPYACPVESCDRRFSRSADLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 261 PYHCEFCSERFS 272
           P+ C+ C  +F+
Sbjct: 62  PFACDICGRKFA 73

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 74.7 bits (182), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 34/72 (47%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 203 ERPAVCSY--CGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEI 260
           ERP  C    C + F R   LT HIRIHTGQ+P+ C IC + F++   L TH R HTGE 
Sbjct: 2   ERPYACPVESCDRRFSRSAELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 261 PYHCEFCSERFS 272
           P+ C+ C  +F+
Sbjct: 62  PFACDICGRKFA 73

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 73.9 bits (180), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 36/94 (38%), Positives = 56/94 (59%), Gaps = 4/94 (4%)
Query: 183 CHRKLSTKNHLRLHMRTHTNERPAVCSY--CGKGFRRGDALTEHIRIHTGQRPYVCEICG 240
           C+++    +HL++H R HT E+P  C +  C + F R D L  H R HTG +P+ C+ C 
Sbjct: 14  CNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQ 73
Query: 241 KGFTQKQALNTHKRGHTGEIPYHCEF--CSERFS 272
           + F++   L TH R HTGE P+ C +  C ++F+
Sbjct: 74  RKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFA 107

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 34/73 (46%), Positives = 44/73 (60%), Gaps = 2/73 (2%)
Query: 203 ERPAVCSY--CGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEI 260
           ERP  C    C + F +   L  HIRIHTGQ+P+ C IC + F+Q   LN H R HTGE 
Sbjct: 2   ERPYACPVESCDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQHTGLNQHIRTHTGEK 61
Query: 261 PYHCEFCSERFST 273
           P+ C+ C  +F+T
Sbjct: 62  PFACDICGRKFAT 74

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 33/72 (45%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
Query: 203 ERPAVCSY--CGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEI 260
           ERP  C    C + F +  +LT HIRIHTGQ+P+ C IC + F++   L TH R HTGE 
Sbjct: 2   ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 261 PYHCEFCSERFS 272
           P+ C+ C  +F+
Sbjct: 62  PFACDICGRKFA 73

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 33/72 (45%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 203 ERPAVCSY--CGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEI 260
           ERP  C    C + F     LT HIRIHTGQ+P+ C IC + F++   L TH R HTGE 
Sbjct: 2   ERPYACPVESCDRRFSDSSNLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 261 PYHCEFCSERFS 272
           P+ C+ C  +F+
Sbjct: 62  PFACDICGRKFA 73

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 67.0 bits (162), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 49/82 (59%), Gaps = 3/82 (3%)
Query: 180 CEVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQ--RPYVCE 237
           CE+C +      HL  H  +H+ E+P  C  CG  F+R D ++ H+R H G   +PY+C+
Sbjct: 10  CEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQ 69
Query: 238 ICGKGFTQKQALNTH-KRGHTG 258
            CGKGF++   LN H K+ H+G
Sbjct: 70  SCGKGFSRPDHLNGHIKQVHSG 91

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 22/46 (47%), Positives = 24/46 (52%)
Query: 229 TGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTK 274
           +G     CEICGK F     LN HK  H+GE PY C  C  RF  K
Sbjct: 3   SGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRK 48

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 65.9 bits (159), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 31/81 (38%), Positives = 44/81 (54%)
Query: 179 ECEVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEI 238
           +CEVC +  S K+ L+ HMR HT  +P  C  C        +L +H+RIH+ +RP+ C+I
Sbjct: 10  KCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQI 69
Query: 239 CGKGFTQKQALNTHKRGHTGE 259
           C         L  H R HTG+
Sbjct: 70  CPYASRNSSQLTVHLRSHTGD 90

>pdb|2WBS|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 89

Iteration: 1
 Score = 65.1 bits (157), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 183 CHRKLSTKNHLRLHMRTHTNERPAVCSY--CGKGFRRGDALTEHIRIHTGQRPYVCEICG 240
           C +  +  +HL+ H+RTHT E+P  C +  CG  F R D LT H R HTG RP+ C+ C 
Sbjct: 13  CGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCD 72
Query: 241 KGFTQKQALNTHKRGH 256
           + F++   L  H + H
Sbjct: 73  RAFSRSDHLALHMKRH 88

>pdb|2WBU|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 90

Iteration: 1
 Score = 64.7 bits (156), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 183 CHRKLSTKNHLRLHMRTHTNERPAVCSY--CGKGFRRGDALTEHIRIHTGQRPYVCEICG 240
           C +  +  +HL+ H+RTHT E+P  C +  CG  F R D LT H R HTG RP+ C+ C 
Sbjct: 14  CGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCD 73
Query: 241 KGFTQKQALNTHKRGH 256
           + F++   L  H + H
Sbjct: 74  RAFSRSDHLALHMKRH 89

>pdb|1UBD|C Chain C, Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element Length = 124

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 37/94 (39%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 183 CHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVC--EICG 240
           C +     + +R H+ TH   R  VC+ CGK F     L  H  +HTG++P+ C  E CG
Sbjct: 13  CTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCG 71
Query: 241 KGFTQKQALNTHKRGHTGEIPYHCEF--CSERFS 272
           K F+    L TH R HTG+ PY C F  C+++F+
Sbjct: 72  KRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFA 105

>pdb|2RPC|A Chain A, Solution Structure Of The Tandem Zf-C2h2 Domains From The Human Zinc Finger Protein Zic 3 Length = 155

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 32/70 (45%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 208 CSYCGKGFRRGDALTEHIRIHTGQRPYVCEI--CGKGFTQKQALNTHKRGHTGEIPYHCE 265
           C   GK F+    L  HIR+HTG++P+ C    CGK F + + L  HKR HTGE P+ CE
Sbjct: 65  CPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCE 124
Query: 266 F--CSERFST 273
           F  C  RF+ 
Sbjct: 125 FEGCDRRFAN 134

>pdb|2EBT|A Chain A, Solution Structure Of Three Tandem Repeats Of Zf-C2h2 Domains From Human Kruppel-Like Factor 5 Length = 100

Iteration: 1
 Score = 61.6 bits (148), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 183 CHRKLSTKNHLRLHMRTHTNERPAVCSY--CGKGFRRGDALTEHIRIHTGQRPYVCEICG 240
           C +  +  +HL+ H+RTHT E+P  C++  C   F R D LT H R HTG +P+ C +C 
Sbjct: 23  CTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCN 82
Query: 241 KGFTQKQALNTHKRGH 256
           + F++   L  H + H
Sbjct: 83  RSFSRSDHLALHMKRH 98

>pdb|1F2I|G Chain G, Cocrystal Structure Of Selected Zinc Finger Dimer Bound To Dna Length = 73

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 204 RPAVCSY--CGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHT 257
           RP  C    C + F R D LT HIRIHTGQ+P+ C IC + F++   L TH R HT
Sbjct: 18  RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT 73

>pdb|1X6E|A Chain A, Solution Structures Of The C2h2 Type Zinc Finger Domain Of Human Zinc Finger Protein 24 Length = 72

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 27/55 (49%), Positives = 34/55 (61%)
Query: 203 ERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHT 257
           E+P  C  CGK F R   L +H R+HTG++PY C  CGK F+Q   L  H+R HT
Sbjct: 12  EKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHT 66

>pdb|2CSH|A Chain A, Solution Structure Of Tandem Repeat Of The Zf-C2h2 Domains Of Human Zinc Finger Protein 297b Length = 110

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 27/61 (44%), Positives = 33/61 (54%)
Query: 211 CGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSER 270
           CGK F        H+ +H G RPY C +CGK F  K  L  H + HTG  PY C  C++R
Sbjct: 15  CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKR 74
Query: 271 F 271
           F
Sbjct: 75  F 75

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 26/54 (48%), Positives = 32/54 (59%)
Query: 208 CSYCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIP 261
           C  CGK F     L++H R HTG++PY C+ CGK F Q+  L  H R HTG  P
Sbjct: 21  CDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGP 74

>pdb|2LCE|A Chain A, Chemical Shift Assignment Of Hr4436b From Homo Sapiens, Northeast Structural Genomics Consortium Length = 74

Iteration: 1
 Score = 54.3 bits (129), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 25/59 (42%), Positives = 32/59 (54%)
Query: 203 ERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIP 261
           ++P  C  C   FR    L  H  +HTG++PY C ICG  F +   L TH R H+GE P
Sbjct: 15  DKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKP 73

>pdb|1LLM|C Chain C, Crystal Structure Of A Zif23-Gcn4 Chimera Bound To Dna Length = 88

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 204 RPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHK 253
           +P  C  C + F R D LT HIR HTG++P+ C+ICG+ F +      H+
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHR 51

>pdb|2ADR|A Chain A, Adr1 Dna-Binding Domain From Saccharomyces Cerevisiae, Nmr, 25 Structures Length = 60

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/55 (45%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 178 FECEVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGDALTEHI-RIHTGQ 231
           F CEVC R  + + HL+ H R+HTNE+P  C  C + F R D L  H  +IH+G 
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN 57

>pdb|2ADR|A Chain A, Adr1 Dna-Binding Domain From Saccharomyces Cerevisiae, Nmr, 25 Structures Length = 60

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 234 YVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTK 274
           +VCE+C + F +++ L  H R HT E PY C  C+  F+ +
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRR 43

>pdb|2LT7|A Chain A, Solution Nmr Structure Of Kaiso Zinc Finger Dna Binding Domain In Complex With Kaiso Binding Site Dna Length = 133

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 41/86 (47%)
Query: 176 IKFECEVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYV 235
           + + C VC R       LR H   H+ E+   C YC K F   +  T+H   HTG+R Y 
Sbjct: 21  VYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQ 80
Query: 236 CEICGKGFTQKQALNTHKRGHTGEIP 261
           C  CGK F   Q +++H +    + P
Sbjct: 81  CLACGKSFINYQFMSSHIKSVHSQDP 106

>pdb|2GLI|A Chain A, Five-Finger GliDNA COMPLEX Length = 155

Iteration: 1
 Score = 51.2 bits (121), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 54/103 (52%), Gaps = 12/103 (11%)
Query: 183 CHRKLSTKNHLRLHMRT---HTNERPAVCSYCG-----KGFRRGDALTEHIRIHTGQRPY 234
           C ++  ++  L  H+ +   H   +  VC + G     + F+    L  H+R HTG++P+
Sbjct: 9   CSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPH 68
Query: 235 VC--EICGKGFTQKQALNTHKRGHTGEIPYHCEF--CSERFST 273
            C  E C K +++ + L TH R HTGE PY CE   CS+ FS 
Sbjct: 69  KCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSN 111

>pdb|3UK3|C Chain C, Crystal Structure Of Znf217 Bound To Dna Length = 57

Iteration: 1
 Score = 50.8 bits (120), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 24/49 (48%), Positives = 28/49 (57%)
Query: 208 CSYCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGH 256
           CSYCGK FR    L  H+R HTG++PY CE C     QK +L  H   H
Sbjct: 7   CSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERH 55

>pdb|4GZN|C Chain C, Mouse Zfp57 Zinc Fingers In Complex With Methylated Dna Length = 60

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 23/55 (41%), Positives = 31/55 (56%)
Query: 202 NERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGH 256
           +ERP  C++CGK +R    L+ H R H G RP  C  CGK F  +  +N H + H
Sbjct: 1   SERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVH 55

>pdb|1TF3|A Chain A, Tfiiia Finger 1-3 Bound To Dna, Nmr, 22 Structures Length = 92

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 207 VCSY--CGKGFRRGDALTEHIRIHTGQRPYVC--EICGKGFTQKQALNTHKRGHTGEIPY 262
           +CS+  CG  + +   L  H+  HTG++P+ C  E C KGFT    L  H   HTGE  +
Sbjct: 5   ICSFADCGAAYNKNWKLQAHLSKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNF 64
Query: 263 HCEF--CSERFSTK 274
            C+   C  RF+TK
Sbjct: 65  TCDSDGCDLRFTTK 78

>pdb|1TF6|A Chain A, Co-crystal Structure Of Xenopus Tfiiia Zinc Finger Domain Bound To The 5s Ribosomal Rna Gene Internal Control Region Length = 190

Iteration: 1
 Score = 48.1 bits (113), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 207 VCSY--CGKGFRRGDALTEHIRIHTGQRPYVC--EICGKGFTQKQALNTHKRGHTGEIPY 262
           +CS+  CG  + +   L  H+  HTG++P+ C  E C KGFT    L  H   HTGE  +
Sbjct: 14  ICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNF 73
Query: 263 HCEF--CSERFSTK 274
            C+   C  RF+TK
Sbjct: 74  TCDSDGCDLRFTTK 87

>pdb|2YSV|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 17 In Zinc Finger Protein 473 Length = 42

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 18/31 (58%), Positives = 24/31 (77%)
Query: 229 TGQRPYVCEICGKGFTQKQALNTHKRGHTGE 259
           +G++PYVC+ CGK FTQ   L+ H+R HTGE
Sbjct: 6   SGEKPYVCQECGKAFTQSSCLSIHRRVHTGE 36

>pdb|2YTS|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 715- 747) Of Human Zinc Finger Protein 484 Length = 46

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 18/31 (58%), Positives = 22/31 (70%)
Query: 231 QRPYVCEICGKGFTQKQALNTHKRGHTGEIP 261
           ++PY+C  CGK F QK  LN H+R HTGE P
Sbjct: 10  EKPYICNECGKSFIQKSHLNRHRRIHTGEKP 40

>pdb|2EMH|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 491- 523) Of Human Zinc Finger Protein 484 Length = 46

Iteration: 1
 Score = 41.2 bits (95), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 231 QRPYVCEICGKGFTQKQALNTHKRGHTGEIP 261
           +RPY+C +CGK FT +  L  H++ HTGE P
Sbjct: 10  ERPYICTVCGKAFTDRSNLIKHQKIHTGEKP 40

>pdb|1X6H|A Chain A, Solution Structures Of The C2h2 Type Zinc Finger Domain Of Human Transcriptional Repressor Ctcf Length = 86

Iteration: 1
 Score = 41.2 bits (95), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 198 RTHTNERPAVCSYCGKGFRRGDALTEHI-RIHTGQ---RPYVCEICGKGFTQKQALNTH 252
           RTHT E+P  CS+C K FR+   L  H  R H        +VC  CGK FT++  +  H
Sbjct: 8   RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARH 66

>pdb|2EPS|A Chain A, Solution Structure Of The 4th Zinc Finger Domain Of Zinc Finger Protein 278 Length = 54

Iteration: 1
 Score = 40.8 bits (94), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 18/40 (45%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 204 RPAVCSYCGKGFRRGDALTEHIR-IHTGQRPYVCEICGKG 242
           +P +C  CGKGF R D L  HI+ +HT +RP+ C++   G
Sbjct: 11  KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSG 50

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	306
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	7e-33
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	9e-33
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-30
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	5e-30
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	7e-28
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	6e-17
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-09
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	9e-31
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	1e-11
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	1e-09
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	3e-04
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	1e-30
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	1e-24
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	2e-22
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	2e-05
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	8e-30
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	2e-26
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	3e-14
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-04
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	3e-29
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	3e-20
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-17
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	7e-29
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	5e-28
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	5e-07
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	2e-04
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	6e-27
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	4e-23
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	1e-21
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	2e-26
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	1e-23
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	1e-23
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	1e-11
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	2e-26
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	2e-26
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	2e-12
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	6e-08
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	2e-05
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	2e-26
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	1e-25
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	8e-20
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	1e-25
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	1e-23
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	4e-15
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	2e-05
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	6e-25
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	1e-17
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	1e-13
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	8e-25
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	3e-22
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	1e-09
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	9e-25
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	2e-16
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	2e-15
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	6e-06
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	2e-04
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	7e-24
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	1e-16
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	5e-13
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	2e-23
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	3e-23
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	4e-23
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	5e-20
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	2e-12
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	3e-06
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	5e-23
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	5e-17
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	4e-13
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	4e-22
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	4e-20
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-13
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	5e-05
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	3e-21
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	2e-20
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	9e-10
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	1e-05
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	1e-04
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	7e-21
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	4e-19
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	1e-07
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	4e-20
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	3e-16
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	7e-12
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	1e-19
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	7e-15
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	9e-13
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	1e-04
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	7e-18
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	1e-17
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	1e-12
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	5e-06
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	3e-17
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	6e-06
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	5e-04
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	6e-17
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	8e-16
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	5e-05
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	8e-04
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	3e-16
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	6e-13
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	9e-13
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	8e-16
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	1e-10
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	2e-09
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	6e-15
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	7e-13
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	3e-06
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-13
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	9e-11
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	3e-13
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	1e-08
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	4e-04
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	5e-04
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-13
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-10
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-13
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-11
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-13
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-11
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-04
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-04
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-13
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-11
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-13
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-11
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-13
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-11
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	7e-13
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	5e-11
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-13
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-11
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-13
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-11
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	9e-13
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-10
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	6e-04
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	9e-13
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-11
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	9e-13
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-10
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-13
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-11
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-12
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-10
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-12
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-10
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	5e-04
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-12
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-11
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-12
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-11
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-12
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	6e-11
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	4e-04
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	6e-04
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-12
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	9e-11
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-12
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-10
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-04
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-12
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-11
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	1e-12
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	4e-11
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-12
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-10
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-12
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-11
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-12
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-11
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-12
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-10
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-12
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-11
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-04
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-12
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	5e-11
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-12
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-11
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-12
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-11
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-12
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-11
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-12
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-11
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-12
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-11
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	2e-12
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	8e-11
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	2e-12
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	1e-10
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	9e-04
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-12
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-11
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-12
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-11
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-12
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-11
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-12
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-11
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	3e-12
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	5e-11
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-12
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-10
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-12
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-11
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-12
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-10
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-12
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-10
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-12
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-10
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-12
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-10
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	4e-12
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	4e-11
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	4e-12
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	5e-11
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-12
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-11
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-12
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-10
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-12
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-10
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-12
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-10
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	5e-12
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	5e-11
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	5e-05
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	8e-05
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	5e-12
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-10
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-12
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-10
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-12
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	9e-11
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-12
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-11
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-12
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-10
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	6e-12
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	6e-10
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-12
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-10
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-12
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-10
2epa_A	72	Krueppel-like factor 10; transforming growth facto	8e-12
2epa_A	72	Krueppel-like factor 10; transforming growth facto	4e-10
2epa_A	72	Krueppel-like factor 10; transforming growth facto	5e-08
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	8e-12
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-10
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	8e-12
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	5e-10
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-12
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-10
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	9e-12
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	5e-10
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	1e-04
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-04
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-12
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-10
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-11
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-10
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-11
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-10
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-11
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-10
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-11
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-10
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	1e-11
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	4e-10
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-11
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-10
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-11
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	7e-11
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-11
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-10
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-04
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-11
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-11
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-11
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-10
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-04
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-11
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	6e-10
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	9e-04
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	2e-11
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	1e-10
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	2e-04
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	3e-11
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	7e-10
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	6e-04
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	4e-11
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	1e-10
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-11
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-10
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-04
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	4e-11
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	2e-09
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	5e-11
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-10
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	6e-11
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	5e-09
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-04
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	6e-11
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	2e-07
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	2e-05
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	2e-04
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-11
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	8e-10
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-04
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-04
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	2e-10
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	1e-06
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-10
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-09
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	3e-10
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	9e-08
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	6e-10
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	3e-09
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	9e-10
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	5e-09
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	2e-09
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	5e-08
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	2e-07
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	3e-08
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	3e-07
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	2e-07
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	1e-06
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	1e-06
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	3e-06
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	3e-06
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	2e-06
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	7e-05
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	5e-06
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	8e-06
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	9e-06
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	4e-05
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	2e-04
1ej6_B	1275	Lambda1; icosahedral, non-equivalence, dsRNA virus	6e-04

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  118 bits (299), Expect = 7e-33
 Identities = 57/136 (41%), Positives = 79/136 (58%), Gaps = 6/136 (4%)

Query: 155 PFECESCKKIFTYHKN-----TTHLGIK-FECEVCHRKLSTKNHLRLHMRTHTNERPAVC 208
           P++C  C K F+  K+      TH G K ++C  C +  S + +LR H RTHT E+P  C
Sbjct: 49  PYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYAC 108

Query: 209 SYCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCS 268
             CGK F +   L  H R HTG++PY C  CGK F+++  L+TH+R HTGE PY C  C 
Sbjct: 109 PECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECG 168

Query: 269 ERFSTKALVRHHVRSH 284
           + FS +  +  H R+H
Sbjct: 169 KSFSRRDALNVHQRTH 184

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  118 bits (299), Expect = 9e-33
 Identities = 56/136 (41%), Positives = 72/136 (52%), Gaps = 6/136 (4%)

Query: 155 PFECESCKKIFTYHKN-----TTHLGIK-FECEVCHRKLSTKNHLRLHMRTHTNERPAVC 208
           P+ C  C K F+   +      TH G K ++C  C +  S K  L  H RTHT E+P  C
Sbjct: 21  PYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKC 80

Query: 209 SYCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCS 268
             CGK F +   L  H R HTG++PY C  CGK F+Q   L  H+R HTGE PY C  C 
Sbjct: 81  PECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECG 140

Query: 269 ERFSTKALVRHHVRSH 284
           + FS +  +  H R+H
Sbjct: 141 KSFSREDNLHTHQRTH 156

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  112 bits (283), Expect = 2e-30
 Identities = 52/114 (45%), Positives = 64/114 (56%), Gaps = 1/114 (0%)

Query: 172 THLGIK-FECEVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTG 230
              G K + C  C +  S  +HL  H RTHT E+P  C  CGK F     LT H R HTG
Sbjct: 15  LEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTG 74

Query: 231 QRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTKALVRHHVRSH 284
           ++PY C  CGK F+Q+  L  H+R HTGE PY C  C + FS  A +R H R+H
Sbjct: 75  EKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTH 128

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  111 bits (280), Expect = 5e-30
 Identities = 69/212 (32%), Positives = 85/212 (40%), Gaps = 34/212 (16%)

Query: 56  KSGLKIHMKSHTLSKRYACSICLAEFHTLTEKDRHTLSHVVEGEYKCNQCDHVAKKLAYL 115
            S            K YAC  C   F        H  +H  E  YKC +C         L
Sbjct: 6   SSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDL 65

Query: 116 QAHMKKHRNEYTAYCDLCQEGFFRKAKYETHNIQKHNAPPFECESCKKIFTYHKNT---- 171
             H + H  E                             P++C  C K F+   N     
Sbjct: 66  TRHQRTHTGE----------------------------KPYKCPECGKSFSQRANLRAHQ 97

Query: 172 -THLGIK-FECEVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHT 229
            TH G K + C  C +  S   HLR H RTHT E+P  C  CGK F R D L  H R HT
Sbjct: 98  RTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHT 157

Query: 230 GQRPYVCEICGKGFTQKQALNTHKRGHTGEIP 261
           G++PY C  CGK F+++ ALN H+R HTG+  
Sbjct: 158 GEKPYKCPECGKSFSRRDALNVHQRTHTGKKT 189

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  105 bits (265), Expect = 7e-28
 Identities = 42/97 (43%), Positives = 53/97 (54%)

Query: 188 STKNHLRLHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQ 247
              +           E+P  C  CGK F R D L EH R HTG++PY C  CGK F+ K+
Sbjct: 4   FGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKK 63

Query: 248 ALNTHKRGHTGEIPYHCEFCSERFSTKALVRHHVRSH 284
            L  H+R HTGE PY C  C + FS +A +R H R+H
Sbjct: 64  DLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTH 100

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 76.3 bits (189), Expect = 6e-17
 Identities = 25/70 (35%), Positives = 35/70 (50%)

Query: 215 FRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTK 274
                +      +  G++PY C  CGK F++   L  H+R HTGE PY C  C + FS K
Sbjct: 3   EFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDK 62

Query: 275 ALVRHHVRSH 284
             +  H R+H
Sbjct: 63  KDLTRHQRTH 72

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 55.9 bits (136), Expect = 1e-09
 Identities = 52/173 (30%), Positives = 75/173 (43%), Gaps = 18/173 (10%)

Query: 46  CNVCSKRCGSKSGLKIHMKSHTLSKRYACSICLAEFHTLTEKDRHTLSHVVEGEYKCNQC 105
           C  C K       L  H ++HT  K Y C  C   F    +  RH  +H  E  YKC +C
Sbjct: 24  CPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPEC 83

Query: 106 DHVAKKLAYLQAHMKKHRNE--YTAYCDLCQEGFFRKAKYETHNI----QKHNAPPFECE 159
                + A L+AH + H  E  Y   C  C + F + A    H      +K    P++C 
Sbjct: 84  GKSFSQRANLRAHQRTHTGEKPYA--CPECGKSFSQLAHLRAHQRTHTGEK----PYKCP 137

Query: 160 SCKKIFTYHKN-----TTHLGIK-FECEVCHRKLSTKNHLRLHMRTHTNERPA 206
            C K F+   N      TH G K ++C  C +  S ++ L +H RTHT ++ +
Sbjct: 138 ECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTGKKTS 190

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score =  111 bits (279), Expect = 9e-31
 Identities = 40/113 (35%), Positives = 61/113 (53%), Gaps = 6/113 (5%)

Query: 178 FECE--VCHRKLSTKNHLRLHMRTHTNERPAVCSY--CGKGFRRGDALTEHIRIHTGQRP 233
           F C    C+++    +HL++H R HT E+P  C +  C + F R D L  H R HTG +P
Sbjct: 7   FMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKP 66

Query: 234 YVCEICGKGFTQKQALNTHKRGHTGEIPYHCEF--CSERFSTKALVRHHVRSH 284
           + C+ C + F++   L TH R HTGE P+ C +  C ++F+    +  H   H
Sbjct: 67  FQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 59.8 bits (146), Expect = 1e-11
 Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 4/60 (6%)

Query: 229 TGQRPYVCE--ICGKGFTQKQALNTHKRGHTGEIPYHCEF--CSERFSTKALVRHHVRSH 284
           + +RP++C    C K + +   L  H R HTGE PY C+F  C  RFS    ++ H R H
Sbjct: 2   SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRH 61

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 54.4 bits (132), Expect = 1e-09
 Identities = 40/136 (29%), Positives = 60/136 (44%), Gaps = 30/136 (22%)

Query: 100 YKCNQ--CDHVAKKLAYLQAHMKKHRNE--YTAYCDLCQEGFFRKAKYETHNIQKHNA-P 154
           + C    C+    KL++LQ H +KH  E  Y      C+  F R  + + H  ++H    
Sbjct: 7   FMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRH-QRRHTGVK 65

Query: 155 PFECESCKKIFTYHKNTTHLGIKFECEVCHRKLSTKNHLRLHMRTHTNERPAVCSY--CG 212
           PF+C++C++ F                      S  +HL+ H RTHT E+P  C +  C 
Sbjct: 66  PFQCKTCQRKF----------------------SRSDHLKTHTRTHTGEKPFSCRWPSCQ 103

Query: 213 KGFRRGDALTEHIRIH 228
           K F R D L  H  +H
Sbjct: 104 KKFARSDELVRHHNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 38.7 bits (91), Expect = 3e-04
 Identities = 30/154 (19%), Positives = 44/154 (28%), Gaps = 50/154 (32%)

Query: 49  CSKRCGSKSGLKIHMKSHTLSKRYACSI--CLAEFHTLTEKDRHTLSHVVEGEYKCNQCD 106
           C+KR    S L++H + HT  K Y C    C   F    +  RH   H     ++C  C 
Sbjct: 14  CNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQ 73

Query: 107 HVAKKLAYLQAHMKKHRNEYTAYCDLCQEGFFRKAKYETHNIQKHNAPPFECESCKKIFT 166
               +  +L+ H + H  E                             PF C        
Sbjct: 74  RKFSRSDHLKTHTRTHTGE----------------------------KPFSCRW------ 99

Query: 167 YHKNTTHLGIKFECEVCHRKLSTKNHLRLHMRTH 200
                           C +K +  + L  H   H
Sbjct: 100 --------------PSCQKKFARSDELVRHHNMH 119

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score =  111 bits (279), Expect = 1e-30
 Identities = 40/111 (36%), Positives = 62/111 (55%), Gaps = 4/111 (3%)

Query: 178 FECEVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGDALTEHIR---IHTGQRPY 234
            EC  CH+K  +K +L++H R HT E+P  C  CGK + R + L EH     ++  ++ +
Sbjct: 8   VECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVF 67

Query: 235 VCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTKA-LVRHHVRSH 284
            C +C + F ++  L  H   HTGE+PY C  CS++F  K  L  H ++ H
Sbjct: 68  TCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLH 118

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 94.9 bits (237), Expect = 1e-24
 Identities = 38/115 (33%), Positives = 52/115 (45%), Gaps = 10/115 (8%)

Query: 155 PFECESCKKIFTYHKN-----TTHLGIK-FECEVCHRKLSTKNHLRLHMR---THTNERP 205
             EC +C K F            H G K FEC  C +    K +L  H      + +E+ 
Sbjct: 7   GVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQV 66

Query: 206 AVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHK-RGHTGE 259
             CS C + FRR   L  H+  HTG+ PY C  C + F QK+ L +H  + H+G 
Sbjct: 67  FTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGP 121

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 89.5 bits (223), Expect = 2e-22
 Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 3/88 (3%)

Query: 200 HTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRG---H 256
            +      C  C K F     L  H R HTG++P+ C  CGK + +K+ L  H+     +
Sbjct: 2   SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMN 61

Query: 257 TGEIPYHCEFCSERFSTKALVRHHVRSH 284
             E  + C  C E F  +  +R H+ SH
Sbjct: 62  RSEQVFTCSVCQETFRRRMELRLHMVSH 89

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 42.5 bits (101), Expect = 2e-05
 Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 3/109 (2%)

Query: 46  CNVCSKRCGSKSGLKIHMKSHTLSKRYACSICLAEFH---TLTEKDRHTLSHVVEGEYKC 102
           C  C K+  SK  LK+H + HT  K + C  C   +     L E +     +  E  + C
Sbjct: 10  CPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTC 69

Query: 103 NQCDHVAKKLAYLQAHMKKHRNEYTAYCDLCQEGFFRKAKYETHNIQKH 151
           + C    ++   L+ HM  H  E    C  C + F +K   ++H I+ H
Sbjct: 70  SVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLH 118

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score =  107 bits (271), Expect = 8e-30
 Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 1/94 (1%)

Query: 172 THLGIK-FECEVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTG 230
           +       +CEVC +  S K+ L+ HMR HT  +P  C  C        +L +H+RIH+ 
Sbjct: 2   SSGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSD 61

Query: 231 QRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHC 264
           +RP+ C+IC         L  H R HTG+     
Sbjct: 62  ERPFKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 99.0 bits (248), Expect = 2e-26
 Identities = 31/86 (36%), Positives = 43/86 (50%)

Query: 199 THTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTG 258
           +  +  P  C  CGK F R D L  H+R HTG +PY C+ C        +LN H R H+ 
Sbjct: 2   SSGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSD 61

Query: 259 EIPYHCEFCSERFSTKALVRHHVRSH 284
           E P+ C+ C       + +  H+RSH
Sbjct: 62  ERPFKCQICPYASRNSSQLTVHLRSH 87

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 66.3 bits (163), Expect = 3e-14
 Identities = 29/144 (20%), Positives = 43/144 (29%), Gaps = 50/144 (34%)

Query: 93  SHVVEGEYKCNQCDHVAKKLAYLQAHMKKHRNEYTAYCDLCQEGFFRKAKYETHNIQKHN 152
           S    G +KC  C     +   L+ HM+ H                              
Sbjct: 2   SSGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGV--------------------------- 34

Query: 153 APPFECESCKKIFTYHKNTTHLGIKFECEVCHRKLSTKNHLRLHMRTHTNERPAVCSYCG 212
             P++C++C                          +  + L  H+R H++ERP  C  C 
Sbjct: 35  -KPYKCKTCDYAA----------------------ADSSSLNKHLRIHSDERPFKCQICP 71

Query: 213 KGFRRGDALTEHIRIHTGQRPYVC 236
              R    LT H+R HTG      
Sbjct: 72  YASRNSSQLTVHLRSHTGDSGPSS 95

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 39.7 bits (94), Expect = 1e-04
 Identities = 24/77 (31%), Positives = 35/77 (45%)

Query: 46  CNVCSKRCGSKSGLKIHMKSHTLSKRYACSICLAEFHTLTEKDRHTLSHVVEGEYKCNQC 105
           C VC K    K  LK HM+ HT  K Y C  C       +  ++H   H  E  +KC  C
Sbjct: 11  CEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQIC 70

Query: 106 DHVAKKLAYLQAHMKKH 122
            + ++  + L  H++ H
Sbjct: 71  PYASRNSSQLTVHLRSH 87

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score =  108 bits (271), Expect = 3e-29
 Identities = 44/152 (28%), Positives = 72/152 (47%), Gaps = 21/152 (13%)

Query: 155 PFECESCKKIFTYHKN-TTHLGIK--------FECEVC-----HRKLSTKNHLRLHMRTH 200
               + C + F   +    H+  +        F C         R    +  L +HMR H
Sbjct: 3   DCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRH 62

Query: 201 TNERPAVCSY--CGKGFRRGDALTEHIRIHTGQRPYVCE--ICGKGFTQKQALNTHK-RG 255
           T E+P  C++  C K + R + L  H+R HTG++PY+CE   C K F+       H+ R 
Sbjct: 63  TGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRT 122

Query: 256 HTGEIPYHCEF--CSERFSTKALVRHHVRSHH 285
           H+ E PY C+   C++R++  + +R HV++ H
Sbjct: 123 HSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVH 154

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 84.2 bits (209), Expect = 3e-20
 Identities = 40/177 (22%), Positives = 63/177 (35%), Gaps = 43/177 (24%)

Query: 100 YKCNQCDHVAKKLAYLQAHMKKHRNEYTAYCDLCQEGFFRKAKYETHNIQKHNAPPFECE 159
            + + C         L  H+                          H  +K     F C 
Sbjct: 4   CRWDGCSQEFDSQEQLVHHINSEH---------------------IHGERK----EFVCH 38

Query: 160 SC-----KKIFT--YHKNT---THLGIK-FEC--EVCHRKLSTKNHLRLHMRTHTNERPA 206
                   + F   Y        H G K  +C  E C +  S   +L+ H+R+HT E+P 
Sbjct: 39  WGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPY 98

Query: 207 VCSY--CGKGFRRGDALTEHI-RIHTGQRPYVCEI--CGKGFTQKQALNTHKRGHTG 258
           +C +  C K F       +H  R H+ ++PYVC++  C K +T   +L  H +   G
Sbjct: 99  MCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 76.9 bits (190), Expect = 2e-17
 Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 10/92 (10%)

Query: 203 ERPAVCSYCGKGFRRGDALTEHI---RIHTGQRPYVCEICG-----KGFTQKQALNTHKR 254
           E       C + F   + L  HI    IH  ++ +VC   G     + F  +  L  H R
Sbjct: 1   ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMR 60

Query: 255 GHTGEIPYHCEF--CSERFSTKALVRHHVRSH 284
            HTGE P+ C F  C + +S    ++ H+RSH
Sbjct: 61  RHTGEKPHKCTFEGCRKSYSRLENLKTHLRSH 92

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score =  105 bits (265), Expect = 7e-29
 Identities = 37/94 (39%), Positives = 49/94 (52%), Gaps = 1/94 (1%)

Query: 172 THLGIK-FECEVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTG 230
                K F C+ C R  +   +L +H RTHT+ERP  C  C K FRR D L +H  IH+ 
Sbjct: 11  PSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSK 70

Query: 231 QRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHC 264
           ++P+ C+ CGKGF Q + L  HK  H        
Sbjct: 71  EKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA 104

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score =  103 bits (259), Expect = 5e-28
 Identities = 27/93 (29%), Positives = 43/93 (46%)

Query: 192 HLRLHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNT 251
                      ++  +C +CG+ F +   L  H R HT +RPY C+IC K F ++  L  
Sbjct: 4   GSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRD 63

Query: 252 HKRGHTGEIPYHCEFCSERFSTKALVRHHVRSH 284
           H+  H+ E P+ C+ C + F     +  H   H
Sbjct: 64  HRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLH 96

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 46.7 bits (112), Expect = 5e-07
 Identities = 31/181 (17%), Positives = 45/181 (24%), Gaps = 78/181 (43%)

Query: 56  KSGLKIHMKSHTLSKRYACSICLAEFHTLTEKDRHTLSHVVEGEYKCNQCDHVAKKLAYL 115
            SG                          T+K           E+ C  C     K   L
Sbjct: 2   SSGSSGGRLPSK-----------------TKK-----------EFICKFCGRHFTKSYNL 33

Query: 116 QAHMKKHRNEYTAYCDLCQEGFFRKAKYETHNIQKHNAPPFECESCKKIFTYHKNTTHLG 175
             H + H +E                             P+ C+ C K F          
Sbjct: 34  LIHERTHTDE----------------------------RPYTCDICHKAFR--------- 56

Query: 176 IKFECEVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYV 235
                    R+   ++H  +H    + E+P  C  CGKGF +   L  H  +H       
Sbjct: 57  ---------RQDHLRDHRYIH----SKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPT 103

Query: 236 C 236
            
Sbjct: 104 A 104

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 39.3 bits (93), Expect = 2e-04
 Identities = 23/128 (17%), Positives = 35/128 (27%), Gaps = 36/128 (28%)

Query: 89  RHTLSHVVEGEYKCNQCDHVAKKLAYLQAHMKKHRNEYTAYCDLCQEGFFRKAKYETHNI 148
              L    + E+ C  C     K   L  H + H +E                       
Sbjct: 7   GGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDE----------------------- 43

Query: 149 QKHNAPPFECESCKKIF------TYHKNTTHLGIK-FECEVCHRKLSTKNHLRLHMRTHT 201
                 P+ C+ C K F        H+   H   K F+C+ C +       L +H   H 
Sbjct: 44  -----RPYTCDICHKAFRRQDHLRDHRYI-HSKEKPFKCQECGKGFCQSRTLAVHKTLHM 97

Query: 202 NERPAVCS 209
                  +
Sbjct: 98  QTSSPTAA 105

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score =  100 bits (253), Expect = 6e-27
 Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 4/103 (3%)

Query: 171 TTHLGIK-FECEVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHT 229
           +   G K + C+ C +  + K+    HM  H   RP  C  CGK F+    L  H++IHT
Sbjct: 3   SGSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHT 61

Query: 230 GQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFS 272
           G +PY C IC K F  + +   H+   +    Y      +  +
Sbjct: 62  GIKPYECNICAKRFMWRDSF--HRHVTSCTKSYEAAKAEQNTT 102

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 90.6 bits (226), Expect = 4e-23
 Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 1/78 (1%)

Query: 197 MRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGH 256
               + ++   C  CGK F        H+ +H G RPY C +CGK F  K  L  H + H
Sbjct: 2   SSGSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 60

Query: 257 TGEIPYHCEFCSERFSTK 274
           TG  PY C  C++RF  +
Sbjct: 61  TGIKPYECNICAKRFMWR 78

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 86.3 bits (215), Expect = 1e-21
 Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 9/103 (8%)

Query: 155 PFECESCKKIFTYHKN-----TTHLGIK-FECEVCHRKLSTKNHLRLHMRTHTNERPAVC 208
            + C+ C K FT+        + HLG++ + C VC +K   K+HL  HM+ HT  +P  C
Sbjct: 10  LYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYEC 68

Query: 209 SYCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNT 251
           + C K F   D+   H  + +  + Y      +  T+    ++
Sbjct: 69  NICAKRFMWRDSF--HRHVTSCTKSYEAAKAEQNTTEASGPSS 109

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score =  101 bits (255), Expect = 2e-26
 Identities = 45/147 (30%), Positives = 65/147 (44%), Gaps = 17/147 (11%)

Query: 155 PFECE--SCKKIFTYHKN-----TTHLGIK-FECE--VCHRKLSTKNHLRLHMRTHTNER 204
           PF C+   C+K FT   +      TH G K F C+   C  + +TK +++ H     N +
Sbjct: 42  PFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIK 101

Query: 205 --PAVCSY--CGKGFRRGDALTEHIRIHTGQRPYVC--EICGKGFTQKQALNTHKRGHTG 258
               VC +  CGK F++ + L  H   HT Q PY C  E C K F+    L  H++ H G
Sbjct: 102 ICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG 161

Query: 259 EIPYHCEFCSERFSTK-ALVRHHVRSH 284
                 + CS    T    ++H    H
Sbjct: 162 YPCKKDDSCSFVGKTWTLYLKHVAECH 188

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 94.6 bits (236), Expect = 1e-23
 Identities = 34/124 (27%), Positives = 48/124 (38%), Gaps = 11/124 (8%)

Query: 172 THLGIK-FECEV--CHRKLSTKNHLRLHMRTHTNERPAVCSY--CGKGFRRGDALTEHIR 226
             +  K + C    C    +    L+ H+  HT E+P  C    C KGF     LT H  
Sbjct: 6   LPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSL 65

Query: 227 IHTGQRPYVCE--ICGKGFTQKQALNTHKRGHTGE--IPYHCEF--CSERFSTKALVRHH 280
            HTG++ + C+   C   FT K  +  H           Y C F  C + F     ++ H
Sbjct: 66  THTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVH 125

Query: 281 VRSH 284
             SH
Sbjct: 126 QFSH 129

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 94.6 bits (236), Expect = 1e-23
 Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 6/96 (6%)

Query: 196 HMRTHTNERPAVCSY--CGKGFRRGDALTEHIRIHTGQRPYVCE--ICGKGFTQKQALNT 251
                   +  +CS+  CG  + +   L  H+  HTG++P+ C+   C KGFT    L  
Sbjct: 3   EKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTR 62

Query: 252 HKRGHTGEIPYHCE--FCSERFSTKALVRHHVRSHH 285
           H   HTGE  + C+   C  RF+TKA ++ H    H
Sbjct: 63  HSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFH 98

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 61.8 bits (151), Expect = 1e-11
 Identities = 37/214 (17%), Positives = 52/214 (24%), Gaps = 86/214 (40%)

Query: 49  CSKRCGSKSGLKIHMKSHTLSKRYACSICLAEFHTLTEKDRHTLSHVVEGE--YKCNQ-- 104
           C K   S   L  H  +HT                              GE  + C+   
Sbjct: 50  CEKGFTSLHHLTRHSLTHT------------------------------GEKNFTCDSDG 79

Query: 105 CDHVAKKLAYLQAHMKKHRNEYTAYCDLCQEGFFRKAKYETHNIQKHNAPPFEC--ESCK 162
           CD      A ++ H  +  N                               + C  E+C 
Sbjct: 80  CDLRFTTKANMKKHFNRFHNI--------------------------KICVYVCHFENCG 113

Query: 163 KIFTYHKNTTHLGIKFECEVCHRKLSTKNHLRLHMRTHTNERPAVCS--YCGKGFRRGDA 220
           K F  H                      N L++H  +HT + P  C    C K F     
Sbjct: 114 KAFKKH----------------------NQLKVHQFSHTQQLPYECPHEGCDKRFSLPSR 151

Query: 221 LTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKR 254
           L  H ++H G      + C            H  
Sbjct: 152 LKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVA 185

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score =  100 bits (252), Expect = 2e-26
 Identities = 35/129 (27%), Positives = 48/129 (37%), Gaps = 19/129 (14%)

Query: 155 PFECESCKKIF------TYHKNTTH---------LGIKFECEVCHRKLSTKNHLRLHMRT 199
               +SC + F        H    H         +    EC    +    K  L  H+R 
Sbjct: 25  SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRV 84

Query: 200 HTNERPAVCSY--CGKGFRRGDALTEHIRIHTGQRPYVCEI--CGKGFTQKQALNTHKRG 255
           HT E+P  C +  CGK F R + L  H R HTG++P+ CE   C + F        H   
Sbjct: 85  HTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHV 144

Query: 256 HTGEIPYHC 264
           HT +     
Sbjct: 145 HTSDKSGPS 153

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score =  100 bits (252), Expect = 2e-26
 Identities = 43/142 (30%), Positives = 59/142 (41%), Gaps = 13/142 (9%)

Query: 156 FECESCKKIFTYHKNTTHLGIKFECEVCHRKLSTKNHLRLHMRTHTNERP---------A 206
                  K     K      +    + C R  ST + L  H+       P          
Sbjct: 4   GSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWE 63

Query: 207 VCSYCGKGFRRGDALTEHIRIHTGQRPYVCEI--CGKGFTQKQALNTHKRGHTGEIPYHC 264
            C   GK F+    L  HIR+HTG++P+ C    CGK F + + L  HKR HTGE P+ C
Sbjct: 64  ECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKC 123

Query: 265 EF--CSERFSTKALVRHHVRSH 284
           EF  C  RF+  +  + H+  H
Sbjct: 124 EFEGCDRRFANSSDRKKHMHVH 145

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 63.1 bits (154), Expect = 2e-12
 Identities = 14/83 (16%), Positives = 22/83 (26%), Gaps = 9/83 (10%)

Query: 211 CGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEF---- 266
            G   +          I   Q     + C + F+    L TH        P         
Sbjct: 3   SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62

Query: 267 -----CSERFSTKALVRHHVRSH 284
                  + F  K  + +H+R H
Sbjct: 63  EECPREGKSFKAKYKLVNHIRVH 85

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 50.4 bits (121), Expect = 6e-08
 Identities = 35/180 (19%), Positives = 49/180 (27%), Gaps = 47/180 (26%)

Query: 49  CSKRCGSKSGLKIHMKSHTLSKRYACSICLAEFHTLTEKDRHTLSHVVEGEYK------- 101
                                       C   F T+ E   H     V G  +       
Sbjct: 3   SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62

Query: 102 --CNQCDHVAKKLAYLQAHMKKHRNEYTAYCDLCQEGFFRKAKYETHNIQKHNAPPFEC- 158
             C +     K    L  H++ H  E                             PF C 
Sbjct: 63  EECPREGKSFKAKYKLVNHIRVHTGE----------------------------KPFPCP 94

Query: 159 -ESCKKIFTYHKNT-----THLGIK-FECEV--CHRKLSTKNHLRLHMRTHTNERPAVCS 209
              C KIF   +N      TH G K F+CE   C R+ +  +  + HM  HT+++    S
Sbjct: 95  FPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS 154

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 43.0 bits (102), Expect = 2e-05
 Identities = 9/47 (19%), Positives = 15/47 (31%)

Query: 239 CGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTKALVRHHVRSHH 285
            G      +   + K     ++    + C   FST   +  HV   H
Sbjct: 3   SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEH 49

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 99.5 bits (249), Expect = 2e-26
 Identities = 39/113 (34%), Positives = 59/113 (52%), Gaps = 7/113 (6%)

Query: 178 FEC--EVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYV 235
             C  + C +     + +R H+ TH   R  VC+ CGK F     L  H  +HTG++P+ 
Sbjct: 6   IACPHKGCTKMFRDNSAMRKHLHTHG-PRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQ 64

Query: 236 CEI--CGKGFTQKQALNTHKRGHTGEIPYHCEF--CSERFSTKALVRHHVRSH 284
           C    CGK F+    L TH R HTG+ PY C F  C+++F+    ++ H+ +H
Sbjct: 65  CTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 117

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 98.0 bits (245), Expect = 1e-25
 Identities = 38/119 (31%), Positives = 49/119 (41%), Gaps = 11/119 (9%)

Query: 155 PFEC--ESCKKIFTYHKN-TTHLGI----KFECEVCHRKLSTKNHLRLHMRTHTNERPAV 207
              C  + C K+F  +     HL         C  C +     + L+ H   HT E+P  
Sbjct: 5   TIACPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQ 64

Query: 208 CSY--CGKGFRRGDALTEHIRIHTGQRPYVCEI--CGKGFTQKQALNTHKRGHTGEIPY 262
           C++  CGK F     L  H+RIHTG RPYVC    C K F Q   L +H   H      
Sbjct: 65  CTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNN 123

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 82.2 bits (204), Expect = 8e-20
 Identities = 35/86 (40%), Positives = 45/86 (52%), Gaps = 5/86 (5%)

Query: 203 ERPAVCSY--CGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEI 260
            R   C +  C K FR   A+ +H+  H G R +VC  CGK F +   L  H+  HTGE 
Sbjct: 3   PRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEK 61

Query: 261 PYHCEF--CSERFSTKALVRHHVRSH 284
           P+ C F  C +RFS    +R HVR H
Sbjct: 62  PFQCTFEGCGKRFSLDFNLRTHVRIH 87

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 96.4 bits (241), Expect = 1e-25
 Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 2/84 (2%)

Query: 178 FECEV--CHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYV 235
           + C V  C R+ S    L  H+R HT ++P  C  C + F R D LT HIR HTG++P+ 
Sbjct: 5   YACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFA 64

Query: 236 CEICGKGFTQKQALNTHKRGHTGE 259
           C+ICG+ F +      H + H  +
Sbjct: 65  CDICGRKFARSDERKRHTKIHLRQ 88

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 91.8 bits (229), Expect = 1e-23
 Identities = 35/84 (41%), Positives = 49/84 (58%), Gaps = 2/84 (2%)

Query: 203 ERPAVCSY--CGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEI 260
           ERP  C    C + F +  +LT HIRIHTGQ+P+ C IC + F++   L TH R HTGE 
Sbjct: 2   ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61

Query: 261 PYHCEFCSERFSTKALVRHHVRSH 284
           P+ C+ C  +F+     + H + H
Sbjct: 62  PFACDICGRKFARSDERKRHTKIH 85

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 68.6 bits (169), Expect = 4e-15
 Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 8/86 (9%)

Query: 155 PFEC--ESCKKIFTYHKN-----TTHLGIK-FECEVCHRKLSTKNHLRLHMRTHTNERPA 206
           P+ C  ESC + F+   +       H G K F+C +C R  S  +HL  H+RTHT E+P 
Sbjct: 4   PYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPF 63

Query: 207 VCSYCGKGFRRGDALTEHIRIHTGQR 232
            C  CG+ F R D    H +IH  Q+
Sbjct: 64  ACDICGRKFARSDERKRHTKIHLRQK 89

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 41.7 bits (99), Expect = 2e-05
 Identities = 19/74 (25%), Positives = 29/74 (39%)

Query: 49  CSKRCGSKSGLKIHMKSHTLSKRYACSICLAEFHTLTEKDRHTLSHVVEGEYKCNQCDHV 108
           C +R      L  H++ HT  K + C IC+  F        H  +H  E  + C+ C   
Sbjct: 12  CDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 71

Query: 109 AKKLAYLQAHMKKH 122
             +    + H K H
Sbjct: 72  FARSDERKRHTKIH 85

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 94.4 bits (236), Expect = 6e-25
 Identities = 28/71 (39%), Positives = 36/71 (50%)

Query: 192 HLRLHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNT 251
           H   H     +++P  C  C   FR    L  H  +HTG++PY C ICG  F +   L T
Sbjct: 4   HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKT 63

Query: 252 HKRGHTGEIPY 262
           H R H+GE PY
Sbjct: 64  HTRIHSGEKPY 74

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 75.2 bits (186), Expect = 1e-17
 Identities = 23/64 (35%), Positives = 31/64 (48%)

Query: 221 LTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTKALVRHH 280
              H  +    +PY C+ C   F  K  L +HK  HTGE PY C  C  +F+  A ++ H
Sbjct: 5   HHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTH 64

Query: 281 VRSH 284
            R H
Sbjct: 65  TRIH 68

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 64.4 bits (158), Expect = 1e-13
 Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 1/64 (1%)

Query: 172 THLGIK-FECEVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTG 230
                K ++C+ C      K +L  H   HT E+P  C+ CG  F R   L  H RIH+G
Sbjct: 11  MTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSG 70

Query: 231 QRPY 234
           ++PY
Sbjct: 71  EKPY 74

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 94.4 bits (236), Expect = 8e-25
 Identities = 33/81 (40%), Positives = 50/81 (61%)

Query: 178 FECEVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCE 237
           F+C++C +     + L  H+  H++ RP  C YCGK F +   + +H  IHTG++P+ C+
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61

Query: 238 ICGKGFTQKQALNTHKRGHTG 258
           +CGK F+Q   L TH R HTG
Sbjct: 62  VCGKAFSQSSNLITHSRKHTG 82

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 87.5 bits (218), Expect = 3e-22
 Identities = 33/77 (42%), Positives = 44/77 (57%)

Query: 208 CSYCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFC 267
           C  CGK F+R   L+ H+ IH+  RPY C+ CGK F QK  +  H   HTGE P+ C+ C
Sbjct: 4   CKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVC 63

Query: 268 SERFSTKALVRHHVRSH 284
            + FS  + +  H R H
Sbjct: 64  GKAFSQSSNLITHSRKH 80

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 53.2 bits (129), Expect = 1e-09
 Identities = 19/51 (37%), Positives = 30/51 (58%)

Query: 234 YVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTKALVRHHVRSH 284
           + C+ICGK F +   L+TH   H+   PY C++C +RF  K+ ++ H   H
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIH 52

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 94.1 bits (235), Expect = 9e-25
 Identities = 24/80 (30%), Positives = 33/80 (41%), Gaps = 4/80 (5%)

Query: 192 HLRLHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTG----QRPYVCEICGKGFTQKQ 247
                 RTHT E+P  CS+C K FR+   L  H + +         +VC  CGK FT++ 
Sbjct: 2   SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61

Query: 248 ALNTHKRGHTGEIPYHCEFC 267
            +  H     G      E  
Sbjct: 62  TMARHADNCAGPDGVEGENS 81

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 71.8 bits (177), Expect = 2e-16
 Identities = 21/77 (27%), Positives = 29/77 (37%), Gaps = 5/77 (6%)

Query: 172 THLGIK-FECEVCHRKLSTKNHLRLHMRTHTNE----RPAVCSYCGKGFRRGDALTEHIR 226
           TH G K + C  C +    K  L +H + + +        VCS CGK F R + +  H  
Sbjct: 9   THTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHAD 68

Query: 227 IHTGQRPYVCEICGKGF 243
              G      E  G   
Sbjct: 69  NCAGPDGVEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 69.5 bits (171), Expect = 2e-15
 Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 4/68 (5%)

Query: 221 LTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEI----PYHCEFCSERFSTKAL 276
                R HTG++PY C  C K F QKQ L+ H + +         + C  C + F+ +  
Sbjct: 3   SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNT 62

Query: 277 VRHHVRSH 284
           +  H  + 
Sbjct: 63  MARHADNC 70

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 42.9 bits (102), Expect = 6e-06
 Identities = 16/116 (13%), Positives = 24/116 (20%), Gaps = 46/116 (39%)

Query: 100 YKCNQCDHVAKKLAYLQAHMKKHRNEYTAYCDLCQEGFFRKAKYETHNIQKHNAPPFECE 159
           Y C+ CD   ++   L  H K++ +                               F C 
Sbjct: 16  YACSHCDKTFRQKQLLDMHFKRYHDPNFVP------------------------AAFVCS 51

Query: 160 SCKKIFTYHKNTTHLGIKFECEVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGF 215
            C K FT                       +N +  H               G   
Sbjct: 52  KCGKTFTR----------------------RNTMARHADNCAGPDGVEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 38.7 bits (91), Expect = 2e-04
 Identities = 14/37 (37%), Positives = 19/37 (51%)

Query: 249 LNTHKRGHTGEIPYHCEFCSERFSTKALVRHHVRSHH 285
             +  R HTGE PY C  C + F  K L+  H + +H
Sbjct: 3   SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYH 39

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 91.7 bits (229), Expect = 7e-24
 Identities = 27/71 (38%), Positives = 33/71 (46%)

Query: 192 HLRLHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNT 251
                       R   C  CGK F     L++H R HTG++PY C+ CGK F Q+  L  
Sbjct: 5   SSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIG 64

Query: 252 HKRGHTGEIPY 262
           H R HTG  P 
Sbjct: 65  HHRVHTGSGPS 75

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 72.1 bits (178), Expect = 1e-16
 Identities = 22/64 (34%), Positives = 32/64 (50%)

Query: 221 LTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTKALVRHH 280
                     +R Y C+ CGK F+    L+ H+R HTGE PY C+ C + F  ++ +  H
Sbjct: 6   SGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGH 65

Query: 281 VRSH 284
            R H
Sbjct: 66  HRVH 69

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 62.5 bits (153), Expect = 5e-13
 Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 1/64 (1%)

Query: 172 THLGIK-FECEVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTG 230
                + ++C+ C +  S  + L  H RTHT E+P  C  CGK F +   L  H R+HTG
Sbjct: 12  QQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTG 71

Query: 231 QRPY 234
             P 
Sbjct: 72  SGPS 75

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 91.0 bits (227), Expect = 2e-23
 Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 2/89 (2%)

Query: 200 HTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGE 259
            +      C  CGK FR    L  H   H+G++PY C +CG  F +K  ++ H R H G 
Sbjct: 2   SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGS 61

Query: 260 I--PYHCEFCSERFSTKALVRHHVRSHHS 286
           +  PY C+ C + FS    +  H++  HS
Sbjct: 62  VGKPYICQSCGKGFSRPDHLNGHIKQVHS 90

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 90.6 bits (226), Expect = 3e-23
 Identities = 33/85 (38%), Positives = 49/85 (57%), Gaps = 3/85 (3%)

Query: 178 FECEVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTG--QRPYV 235
             CE+C +      HL  H  +H+ E+P  C  CG  F+R D ++ H+R H G   +PY+
Sbjct: 8   VACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYI 67

Query: 236 CEICGKGFTQKQALNTH-KRGHTGE 259
           C+ CGKGF++   LN H K+ H+G 
Sbjct: 68  CQSCGKGFSRPDHLNGHIKQVHSGP 92

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 89.9 bits (224), Expect = 4e-23
 Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 4/85 (4%)

Query: 178 FECEVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCE 237
           F+C +C R  S  +HL  H+RTHT E+P  C  CG+ F R D    H  I     P + +
Sbjct: 4   FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQH-ILPILED 62

Query: 238 ICGKGFTQKQALNTHK---RGHTGE 259
              +  ++   L       +   GE
Sbjct: 63  KVEELLSKNYHLENEVARLKKLVGE 87

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 81.8 bits (203), Expect = 5e-20
 Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 4/84 (4%)

Query: 204 RPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYH 263
           +P  C  C + F R D LT HIR HTG++P+ C+ICG+ F +      H+      +P  
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQH-ILPIL 60

Query: 264 CEFCSERFSTKA-LVRH--HVRSH 284
            +   E  S    L      ++  
Sbjct: 61  EDKVEELLSKNYHLENEVARLKKL 84

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 61.4 bits (150), Expect = 2e-12
 Identities = 19/54 (35%), Positives = 29/54 (53%)

Query: 232 RPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTKALVRHHVRSHH 285
           +P+ C IC + F++   L TH R HTGE P+ C+ C  +F+     + H    H
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQH 55

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 43.6 bits (104), Expect = 3e-06
 Identities = 17/78 (21%), Positives = 34/78 (43%), Gaps = 1/78 (1%)

Query: 46  CNVCSKRCGSKSGLKIHMKSHTLSKRYACSICLAEFHTLTEKDRHTLSHVVEGEYKCNQC 105
           C +C +       L  H+++HT  K +AC IC  +F    E+ RH            ++ 
Sbjct: 6   CRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQ-HILPILEDKV 64

Query: 106 DHVAKKLAYLQAHMKKHR 123
           + +  K  +L+  + + +
Sbjct: 65  EELLSKNYHLENEVARLK 82

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 89.5 bits (223), Expect = 5e-23
 Identities = 28/70 (40%), Positives = 36/70 (51%)

Query: 193 LRLHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTH 252
                  H+ E+P  C  CGK F R   L +H R+HTG++PY C  CGK F+Q   L  H
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61

Query: 253 KRGHTGEIPY 262
           +R HT     
Sbjct: 62  QRIHTSGPSS 71

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 73.3 bits (181), Expect = 5e-17
 Identities = 26/64 (40%), Positives = 37/64 (57%)

Query: 221 LTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTKALVRHH 280
            +    IH+G++PY C  CGK F++   L  H+R HTGE PY C  C + FS  + + +H
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61

Query: 281 VRSH 284
            R H
Sbjct: 62  QRIH 65

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 62.5 bits (153), Expect = 4e-13
 Identities = 24/64 (37%), Positives = 29/64 (45%), Gaps = 1/64 (1%)

Query: 172 THLGIK-FECEVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTG 230
            H G K + C  C +  S  + L  H R HT E+P  C  CGK F +   L  H RIHT 
Sbjct: 8   IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTS 67

Query: 231 QRPY 234
               
Sbjct: 68  GPSS 71

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 86.8 bits (216), Expect = 4e-22
 Identities = 17/74 (22%), Positives = 26/74 (35%), Gaps = 3/74 (4%)

Query: 192 HLRLHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTG--QRPYVCEICGKGFTQKQAL 249
                 RTH+ E+P  C  C   F +   +  HI          + C  C     +K  L
Sbjct: 2   SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61

Query: 250 NTH-KRGHTGEIPY 262
             H ++ H+   P 
Sbjct: 62  GVHLRKQHSYSGPS 75

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 81.8 bits (203), Expect = 4e-20
 Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 2/68 (2%)

Query: 221 LTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEI--PYHCEFCSERFSTKALVR 278
                R H+G++PY C IC   FTQ   +  H      E    +HC  C    + K+ + 
Sbjct: 3   SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLG 62

Query: 279 HHVRSHHS 286
            H+R  HS
Sbjct: 63  VHLRKQHS 70

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 63.7 bits (156), Expect = 2e-13
 Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 4/67 (5%)

Query: 172 THLGIK-FECEVCHRKLSTKNHLRLHMRTHTNE--RPAVCSYCGKGFRRGDALTEHIR-I 227
           TH G K +EC +CH + +    +++H+     E      C +C     R   L  H+R  
Sbjct: 9   THSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQ 68

Query: 228 HTGQRPY 234
           H+   P 
Sbjct: 69  HSYSGPS 75

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 39.8 bits (94), Expect = 5e-05
 Identities = 18/66 (27%), Positives = 26/66 (39%), Gaps = 2/66 (3%)

Query: 59  LKIHMKSHTLSKRYACSICLAEFHTLTEKDRHTLSHVVEGE--YKCNQCDHVAKKLAYLQ 116
                ++H+  K Y C IC A F        H L    E    + C  CD V  + + L 
Sbjct: 3   SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLG 62

Query: 117 AHMKKH 122
            H++K 
Sbjct: 63  VHLRKQ 68

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 85.4 bits (212), Expect = 3e-21
 Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 6/101 (5%)

Query: 188 STKNHLRLHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVC--EICGKGFTQ 245
            +        R H  + P     C K + +   L  H+R HTG++PY C  E C   F +
Sbjct: 4   GSSGPDLEKRRIHYCDYP----GCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFAR 59

Query: 246 KQALNTHKRGHTGEIPYHCEFCSERFSTKALVRHHVRSHHS 286
              L  H R HTG  P+ C  C+  FS    +  H++ H +
Sbjct: 60  SDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQN 100

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 83.1 bits (206), Expect = 2e-20
 Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 5/88 (5%)

Query: 172 THLGIKFECEVCHRKLSTKNHLRLHMRTHTNERPAVCSY--CGKGFRRGDALTEHIRIHT 229
            H      C   + K S   HL+ H+RTHT E+P  C++  C   F R D LT H R HT
Sbjct: 15  IHYCDYPGCTKVYTKSS---HLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHT 71

Query: 230 GQRPYVCEICGKGFTQKQALNTHKRGHT 257
           G +P+ C +C + F++   L  H + H 
Sbjct: 72  GAKPFQCGVCNRSFSRSDHLALHMKRHQ 99

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 54.2 bits (131), Expect = 9e-10
 Identities = 25/72 (34%), Positives = 29/72 (40%), Gaps = 6/72 (8%)

Query: 215 FRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHC--EFCSERFS 272
                   E  RIH    P     C K +T+   L  H R HTGE PY C  E C  RF+
Sbjct: 3   SGSSGPDLEKRRIHYCDYPG----CTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFA 58

Query: 273 TKALVRHHVRSH 284
               +  H R H
Sbjct: 59  RSDELTRHYRKH 70

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 42.2 bits (100), Expect = 1e-05
 Identities = 30/98 (30%), Positives = 42/98 (42%), Gaps = 18/98 (18%)

Query: 118 HMKKHRNEYTAYCDLCQEGFFR----KAKYETHNIQKHNAPPFEC--ESCKKIF------ 165
              + R  +      C + + +    KA   TH  +K    P++C  E C   F      
Sbjct: 8   PDLEKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEK----PYKCTWEGCDWRFARSDEL 63

Query: 166 TYHKNTTHLGIK-FECEVCHRKLSTKNHLRLHMRTHTN 202
           T H    H G K F+C VC+R  S  +HL LHM+ H N
Sbjct: 64  TRHYRK-HTGAKPFQCGVCNRSFSRSDHLALHMKRHQN 100

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 39.5 bits (93), Expect = 1e-04
 Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 2/78 (2%)

Query: 49  CSKRCGSKSGLKIHMKSHTLSKRYACSI--CLAEFHTLTEKDRHTLSHVVEGEYKCNQCD 106
           C+K     S LK H+++HT  K Y C+   C   F    E  RH   H     ++C  C+
Sbjct: 23  CTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCN 82

Query: 107 HVAKKLAYLQAHMKKHRN 124
               +  +L  HMK+H+N
Sbjct: 83  RSFSRSDHLALHMKRHQN 100

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 84.1 bits (209), Expect = 7e-21
 Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 2/82 (2%)

Query: 177 KFECEVCHRKLSTKNHLRLHMRTHTNERPAVCSY--CGKGFRRGDALTEHIRIHTGQRPY 234
             +   C +  +  +HL+ H+RTHT E+P  C +  CG  F R D LT H R HTG RP+
Sbjct: 7   TCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPF 66

Query: 235 VCEICGKGFTQKQALNTHKRGH 256
            C+ C + F++   L  H + H
Sbjct: 67  QCQKCDRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 79.5 bits (197), Expect = 4e-19
 Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 2/87 (2%)

Query: 200 HTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVC--EICGKGFTQKQALNTHKRGHT 257
            T       + CGK + +   L  H+R HTG++PY C  + CG  F +   L  H R HT
Sbjct: 2   RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 61

Query: 258 GEIPYHCEFCSERFSTKALVRHHVRSH 284
           G  P+ C+ C   FS    +  H++ H
Sbjct: 62  GHRPFQCQKCDRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 47.9 bits (115), Expect = 1e-07
 Identities = 28/140 (20%), Positives = 43/140 (30%), Gaps = 52/140 (37%)

Query: 89  RHTLSHVVEGEYKCNQCDHVAKKLAYLQAHMKKHRNEYTAYCDLCQEGFFRKAKYETHNI 148
           + T +H          C     K ++L+AH++ H  E                       
Sbjct: 1   KRTATHT----CDYAGCGKTYTKSSHLKAHLRTHTGE----------------------- 33

Query: 149 QKHNAPPFECESCKKIFTYHKNTTHLGIKFECEVCHRKLSTKNHLRLHMRTHTNERPAVC 208
                 P+ C+                     + C  K +  + L  H R HT  RP  C
Sbjct: 34  -----KPYHCDW--------------------DGCGWKFARSDELTRHYRKHTGHRPFQC 68

Query: 209 SYCGKGFRRGDALTEHIRIH 228
             C + F R D L  H++ H
Sbjct: 69  QKCDRAFSRSDHLALHMKRH 88

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 81.8 bits (203), Expect = 4e-20
 Identities = 21/77 (27%), Positives = 30/77 (38%), Gaps = 5/77 (6%)

Query: 200 HTNERPAVCSY--CGKGFRRGDALTEHIRI-HTGQRPYVCE--ICGKGFTQKQALNTHKR 254
            +      C +  CG+ F     L  H +  H  Q+ + C    CGK F  K+ L  H +
Sbjct: 2   SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61

Query: 255 GHTGEIPYHCEFCSERF 271
            H+    Y CEF     
Sbjct: 62  LHSDTRDYICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 71.0 bits (175), Expect = 3e-16
 Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 5/71 (7%)

Query: 178 FECEV--CHRKLSTKNHLRLHMR-THTNERPAVCSY--CGKGFRRGDALTEHIRIHTGQR 232
             C+   C R  S + +L  H +  H +++   C    CGK F     L EH+++H+  R
Sbjct: 8   MPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTR 67

Query: 233 PYVCEICGKGF 243
            Y+CE  G   
Sbjct: 68  DYICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 59.1 bits (144), Expect = 7e-12
 Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 5/62 (8%)

Query: 228 HTGQRPYVCEI--CGKGFTQKQALNTHKR-GHTGEIPYHCEF--CSERFSTKALVRHHVR 282
            +G     C+   CG+ F+ +Q LN HK+  H  +  + C    C + F+ K  ++ H++
Sbjct: 2   SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61

Query: 283 SH 284
            H
Sbjct: 62  LH 63

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 80.2 bits (199), Expect = 1e-19
 Identities = 18/67 (26%), Positives = 26/67 (38%)

Query: 198 RTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHT 257
            + ++  P  CS C        AL  H RIH   RP+ C  C     Q   L+ H +   
Sbjct: 2   SSGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFH 61

Query: 258 GEIPYHC 264
           G++    
Sbjct: 62  GDMSGPS 68

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 67.1 bits (165), Expect = 7e-15
 Identities = 15/60 (25%), Positives = 25/60 (41%)

Query: 226 RIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTKALVRHHVRSHH 285
              +   P  C  C    + K AL  H+R H  + P+ C +CS      + +  H++  H
Sbjct: 2   SSGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFH 61

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 61.4 bits (150), Expect = 9e-13
 Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 1/64 (1%)

Query: 172 THLGIK-FECEVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTG 230
           +       +C  C    S+K  LR+H R H  +RP  C+YC    ++   L++H++   G
Sbjct: 3   SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHG 62

Query: 231 QRPY 234
               
Sbjct: 63  DMSG 66

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 38.6 bits (91), Expect = 1e-04
 Identities = 20/79 (25%), Positives = 28/79 (35%), Gaps = 32/79 (40%)

Query: 46  CNVCSKRCGSKSGLKIHMKSHTLSKRYACSICLAEFHTLTEKDRHTLSHVVEGE--YKCN 103
           C+ CS  C SK+ L+IH + H                                +  +KCN
Sbjct: 12  CSECSYSCSSKAALRIHERIHC------------------------------TDRPFKCN 41

Query: 104 QCDHVAKKLAYLQAHMKKH 122
            C    K+ + L  HMKK 
Sbjct: 42  YCSFDTKQPSNLSKHMKKF 60

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 75.9 bits (187), Expect = 7e-18
 Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 3/67 (4%)

Query: 228 HTGQRPYVCEICGKGFTQKQALNTHKRGHT---GEIPYHCEFCSERFSTKALVRHHVRSH 284
            +G     CEICG    QK +LN H+R H      + + CEFC +RF     V  H    
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61

Query: 285 HSSARLG 291
           H +  L 
Sbjct: 62  HPALLLA 68

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 74.7 bits (184), Expect = 1e-17
 Identities = 15/69 (21%), Positives = 25/69 (36%), Gaps = 3/69 (4%)

Query: 200 HTNERPAVCSYCGKGFRRGDALTEHIRIHT---GQRPYVCEICGKGFTQKQALNTHKRGH 256
            +      C  CG   R+  +L  H R H        + CE CGK F +  ++  H+   
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61

Query: 257 TGEIPYHCE 265
              +    +
Sbjct: 62  HPALLLAPQ 70

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 61.3 bits (149), Expect = 1e-12
 Identities = 18/70 (25%), Positives = 24/70 (34%), Gaps = 4/70 (5%)

Query: 178 FECEVCHRKLSTKNHLRLHMRTHTN---ERPAVCSYCGKGFRRGDALTEHIRI-HTGQRP 233
            +CE+C      K  L  H R H          C +CGK F + D++  H    H     
Sbjct: 8   LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLL 67

Query: 234 YVCEICGKGF 243
              E  G   
Sbjct: 68  APQESSGPSS 77

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 43.2 bits (102), Expect = 5e-06
 Identities = 12/63 (19%), Positives = 18/63 (28%), Gaps = 3/63 (4%)

Query: 46  CNVCSKRCGSKSGLKIHMKSHTLS---KRYACSICLAEFHTLTEKDRHTLSHVVEGEYKC 102
           C +C   C  K+ L  H + H  +    R+ C  C   F        H            
Sbjct: 10  CEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAP 69

Query: 103 NQC 105
            + 
Sbjct: 70  QES 72

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 74.2 bits (183), Expect = 3e-17
 Identities = 27/83 (32%), Positives = 37/83 (44%), Gaps = 5/83 (6%)

Query: 207 VCSY--CGKGFRRGDALTEHIRIHTGQRPYVC--EICGKGFTQKQALNTHKRGHTGEIPY 262
           VC +  CGK F++ + L  H   HT Q PY C  E C K F+    L  H++ H G    
Sbjct: 3   VCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCK 62

Query: 263 HCEFCSERFSTKA-LVRHHVRSH 284
             + CS    T    ++H    H
Sbjct: 63  KDDSCSFVGKTWTLYLKHVAECH 85

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 43.0 bits (102), Expect = 6e-06
 Identities = 16/78 (20%), Positives = 27/78 (34%), Gaps = 8/78 (10%)

Query: 157 ECESCKKIFTYHKNT-----THLGIK-FEC--EVCHRKLSTKNHLRLHMRTHTNERPAVC 208
             E+C K F  H        +H     +EC  E C ++ S  + L+ H + H        
Sbjct: 5   HFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKD 64

Query: 209 SYCGKGFRRGDALTEHIR 226
             C    +      +H+ 
Sbjct: 65  DSCSFVGKTWTLYLKHVA 82

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 37.6 bits (88), Expect = 5e-04
 Identities = 20/75 (26%), Positives = 26/75 (34%), Gaps = 2/75 (2%)

Query: 49  CSKRCGSKSGLKIHMKSHTLSKRYACS--ICLAEFHTLTEKDRHTLSHVVEGEYKCNQCD 106
           C K     + LK+H  SHT    Y C    C   F   +   RH   H      K + C 
Sbjct: 9   CGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCS 68

Query: 107 HVAKKLAYLQAHMKK 121
            V K       H+ +
Sbjct: 69  FVGKTWTLYLKHVAE 83

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 73.0 bits (180), Expect = 6e-17
 Identities = 13/63 (20%), Positives = 19/63 (30%), Gaps = 2/63 (3%)

Query: 198 RTHTNERPAVCSYCGKGFRRGDALTEHIRI--HTGQRPYVCEICGKGFTQKQALNTHKRG 255
            T   E    C  C + +        H         + Y C  C K FT+K  +  H + 
Sbjct: 3   FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKI 62

Query: 256 HTG 258
              
Sbjct: 63  IHK 65

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 69.9 bits (172), Expect = 8e-16
 Identities = 15/62 (24%), Positives = 24/62 (38%), Gaps = 2/62 (3%)

Query: 226 RIHTGQRPYVCEICGKGFTQKQALNTHKR--GHTGEIPYHCEFCSERFSTKALVRHHVRS 283
               G+  Y C++C + +T       H           Y C FC + F+ K  +  HV+ 
Sbjct: 3   FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKI 62

Query: 284 HH 285
            H
Sbjct: 63  IH 64

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 39.8 bits (94), Expect = 5e-05
 Identities = 9/55 (16%), Positives = 26/55 (47%), Gaps = 8/55 (14%)

Query: 155 PFECESCKKIFTYHKN-------TTHLGIK-FECEVCHRKLSTKNHLRLHMRTHT 201
            + C+ C +++T+  N       +    +K + C  C ++ + K+++  H++   
Sbjct: 10  TYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIH 64

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 36.4 bits (85), Expect = 8e-04
 Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 1/35 (2%)

Query: 253 KRGHTGEIPYHCEFCSERFSTKA-LVRHHVRSHHS 286
           +    GE  Y C+ CS  ++  +   RH+V SH  
Sbjct: 2   EFTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKR 36

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 71.0 bits (175), Expect = 3e-16
 Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 1/58 (1%)

Query: 204 RPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTH-KRGHTGEI 260
           R  VC  C + F R + L  H R HT ++PY C +C + FT++  L  H ++ H+G +
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGNL 58

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 61.7 bits (151), Expect = 6e-13
 Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 1/54 (1%)

Query: 232 RPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTKA-LVRHHVRSH 284
           R +VCE+C + F +++ L  H R HT E PY C  C+  F+ +  L+RH  + H
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIH 54

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 61.3 bits (150), Expect = 9e-13
 Identities = 25/54 (46%), Positives = 33/54 (61%), Gaps = 1/54 (1%)

Query: 178 FECEVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGDALTEHI-RIHTG 230
           F CEVC R  + + HL+ H R+HTNE+P  C  C + F R D L  H  +IH+G
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 70.0 bits (172), Expect = 8e-16
 Identities = 30/72 (41%), Positives = 39/72 (54%), Gaps = 4/72 (5%)

Query: 188 STKNHLRLHMRTHTNERPAVCSY--CGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQ 245
              N+L  ++      RP  C    C + F R D LT HIRIHTGQ+P+ C IC + F++
Sbjct: 4   HPMNNLLNYVVPK--MRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSR 61

Query: 246 KQALNTHKRGHT 257
              L TH R HT
Sbjct: 62  SDHLTTHIRTHT 73

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 55.8 bits (135), Expect = 1e-10
 Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 2/61 (3%)

Query: 226 RIHTGQRPYVC--EICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTKALVRHHVRS 283
            +    RPY C  E C + F++   L  H R HTG+ P+ C  C   FS    +  H+R+
Sbjct: 12  YVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRT 71

Query: 284 H 284
           H
Sbjct: 72  H 72

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 51.9 bits (125), Expect = 2e-09
 Identities = 22/49 (44%), Positives = 28/49 (57%)

Query: 181 EVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHT 229
           E C R+ S  + L  H+R HT ++P  C  C + F R D LT HIR HT
Sbjct: 25  ESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT 73

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 66.8 bits (164), Expect = 6e-15
 Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 1/51 (1%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHI-RIHTGQRPYVCEICGKGFTQ 245
              + +  +P +C  CGKGF R D L  HI ++HT +RP+ C++   G + 
Sbjct: 3   SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 61.4 bits (150), Expect = 7e-13
 Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 1/51 (1%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTH-KRGHTGEIPYHCEFCSERFST 273
                +  +PY+C+ CGKGF++   LN H K+ HT E P+ C+      S+
Sbjct: 3   SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 43.0 bits (102), Expect = 3e-06
 Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 2/51 (3%)

Query: 170 NTTHLGIK-FECEVCHRKLSTKNHLRLHM-RTHTNERPAVCSYCGKGFRRG 218
            ++    K + C+ C +  S  +HL  H+ + HT+ERP  C     G   G
Sbjct: 4   GSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSSG 54

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.5 bits (153), Expect = 2e-13
 Identities = 16/42 (38%), Positives = 21/42 (50%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCE 265
                TG++P+ C+ICGK F  +  LN H   HT E P    
Sbjct: 3   SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.2 bits (134), Expect = 9e-11
 Identities = 13/42 (30%), Positives = 18/42 (42%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCE 237
              + T E+P  C  CGK F     L  H  +HT ++P    
Sbjct: 3   SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 64.4 bits (156), Expect = 3e-13
 Identities = 16/104 (15%), Positives = 32/104 (30%), Gaps = 6/104 (5%)

Query: 188 STKNHLRLHMRTHTNERPAVCSYCGKGFRRGDALTEHIRI-----HTGQRPYVCEICGKG 242
           S+ +  +L+    T      C  C   +     LT H+                      
Sbjct: 2   SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWS 61

Query: 243 FTQKQALNTHKRGHTGEIPYHCEFCSERFSTKA-LVRHHVRSHH 285
             +K++L   +     +    C +C   F +   L  H +++ H
Sbjct: 62  KPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKH 105

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 51.7 bits (123), Expect = 1e-08
 Identities = 22/102 (21%), Positives = 32/102 (31%), Gaps = 7/102 (6%)

Query: 168 HKNTTHLGIKFECEVCHRKLSTKNHLRLHMR-----THTNERPAVCSYCGKGFRRGDALT 222
           + +      KF C+ C     T   L +HM         N      +       R  +L 
Sbjct: 10  YGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLL 69

Query: 223 EHIRIHTGQRPYVCEICGKGFTQKQALNTH--KRGHTGEIPY 262
           E       Q+   C  CG  F   Q L+ H  K  H  ++  
Sbjct: 70  EMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQKVSG 111

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 38.6 bits (89), Expect = 4e-04
 Identities = 17/86 (19%), Positives = 25/86 (29%), Gaps = 5/86 (5%)

Query: 43  SLACNVCSKRCGSKSGLKIHMKS--HTLSKRYACSICLAEFHTLTEKD---RHTLSHVVE 97
              C  CS    +   L +HM    H     +       +  +   K            +
Sbjct: 19  KFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQ 78

Query: 98  GEYKCNQCDHVAKKLAYLQAHMKKHR 123
              KC  C H  + L  L  HM K +
Sbjct: 79  KVLKCMYCGHSFESLQDLSVHMIKTK 104

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 38.2 bits (88), Expect = 5e-04
 Identities = 19/102 (18%), Positives = 32/102 (31%), Gaps = 5/102 (4%)

Query: 55  SKSGLKIHMKSHTLSKRYACSICLAEFHTLTEKDRH--TLSHVVEGEYKCNQCDHVAKKL 112
           S S  K++    T + ++ C  C A + TL E   H     H  +  ++ +  +      
Sbjct: 3   SGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSK 62

Query: 113 ---AYLQAHMKKHRNEYTAYCDLCQEGFFRKAKYETHNIQKH 151
                L     K   +    C  C   F        H I+  
Sbjct: 63  PRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTK 104

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.8 bits (151), Expect = 4e-13
 Identities = 18/41 (43%), Positives = 24/41 (58%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHC 264
                TG++PY CE CGKG+  K  L+ H++ HTGE P   
Sbjct: 3   SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.2 bits (134), Expect = 1e-10
 Identities = 15/41 (36%), Positives = 21/41 (51%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVC 236
              + T E+P  C  CGKG+     L  H ++HTG+RP   
Sbjct: 3   SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 61.8 bits (151), Expect = 5e-13
 Identities = 19/42 (45%), Positives = 23/42 (54%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCE 265
                TG++PY CE CGKGF  ++ L TH   HTGE P    
Sbjct: 3   SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 55.6 bits (135), Expect = 7e-11
 Identities = 15/42 (35%), Positives = 20/42 (47%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCE 237
              + T E+P  C  CGKGF     L  H  +HTG++P    
Sbjct: 3   SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.8 bits (151), Expect = 5e-13
 Identities = 17/41 (41%), Positives = 23/41 (56%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHC 264
                TG++PY C  CGK FT+K  L+ H++ HTGE     
Sbjct: 3   SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.0 bits (136), Expect = 5e-11
 Identities = 16/41 (39%), Positives = 20/41 (48%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVC 236
              + T E+P  CS CGK F R   L  H + HTG+R    
Sbjct: 3   SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 9e-04
 Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 1/39 (2%)

Query: 172 THLGIK-FECEVCHRKLSTKNHLRLHMRTHTNERPAVCS 209
           +  G K ++C  C +  + K+ L +H ++HT ER +  S
Sbjct: 6   SGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS 44

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 9e-04
 Identities = 12/34 (35%), Positives = 18/34 (52%)

Query: 251 THKRGHTGEIPYHCEFCSERFSTKALVRHHVRSH 284
           +     TGE PY C  C + F+ K+ +  H +SH
Sbjct: 2   SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSH 35

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.4 bits (150), Expect = 5e-13
 Identities = 18/41 (43%), Positives = 24/41 (58%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHC 264
                TG+RPY+C +CGK FT +  L  H++ HTGE P   
Sbjct: 3   SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.0 bits (136), Expect = 5e-11
 Identities = 16/41 (39%), Positives = 23/41 (56%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVC 236
              + T ERP +C+ CGK F     L +H +IHTG++P   
Sbjct: 3   SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.4 bits (150), Expect = 6e-13
 Identities = 18/42 (42%), Positives = 23/42 (54%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCE 265
                TG++PY C  CGK FT +  L TH++ HTGE P    
Sbjct: 3   SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPS 44

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.2 bits (134), Expect = 9e-11
 Identities = 15/42 (35%), Positives = 21/42 (50%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCE 237
              + T E+P  C+ CGK F     L  H +IHTG++P    
Sbjct: 3   SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPS 44

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.0 bits (149), Expect = 7e-13
 Identities = 18/42 (42%), Positives = 21/42 (50%)

Query: 223 EHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHC 264
                 TG+R Y C  CGK F +K  L  H+R HTGE P   
Sbjct: 2   SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.5 bits (140), Expect = 1e-11
 Identities = 18/41 (43%), Positives = 21/41 (51%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVC 236
              + T ER   CS CGK F R   L  H RIHTG++P   
Sbjct: 3   SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.0 bits (149), Expect = 7e-13
 Identities = 14/41 (34%), Positives = 22/41 (53%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHC 264
                + ++PY CE CGKG+ ++  L+ H+R H GE     
Sbjct: 3   SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.0 bits (136), Expect = 5e-11
 Identities = 13/41 (31%), Positives = 20/41 (48%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVC 236
              + + E+P  C  CGKG+ R   L  H R+H G++    
Sbjct: 3   SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.0 bits (149), Expect = 7e-13
 Identities = 19/41 (46%), Positives = 25/41 (60%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHC 264
                TG++PY C ICGK FT+K  L+ H++ HTGE P   
Sbjct: 3   SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.6 bits (135), Expect = 7e-11
 Identities = 16/41 (39%), Positives = 22/41 (53%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVC 236
              + T E+P  CS CGK F +   L  H +IHTG++P   
Sbjct: 3   SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.0 bits (149), Expect = 8e-13
 Identities = 17/41 (41%), Positives = 22/41 (53%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHC 264
                TG+ P++C  CGK FT K  L  H++ HTGE P   
Sbjct: 3   SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.0 bits (136), Expect = 5e-11
 Identities = 17/41 (41%), Positives = 21/41 (51%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVC 236
              + T E P +CS CGK F     L  H +IHTG+RP   
Sbjct: 3   SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.0 bits (149), Expect = 9e-13
 Identities = 16/42 (38%), Positives = 20/42 (47%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCE 265
                TG++P+ C  C K F  K  L  H+R HTGE P    
Sbjct: 3   SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS 44

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.2 bits (134), Expect = 1e-10
 Identities = 15/42 (35%), Positives = 19/42 (45%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCE 237
              + T E+P  CS C K F     L  H R HTG++P    
Sbjct: 3   SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS 44

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.9 bits (84), Expect = 6e-04
 Identities = 17/39 (43%), Positives = 25/39 (64%), Gaps = 1/39 (2%)

Query: 172 THLGIK-FECEVCHRKLSTKNHLRLHMRTHTNERPAVCS 209
           +  G K FEC  C +  +TK++L +H RTHT E+P+  S
Sbjct: 6   SGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS 44

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.6 bits (148), Expect = 9e-13
 Identities = 16/43 (37%), Positives = 19/43 (44%)

Query: 223 EHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCE 265
                 TG++PY C +CGK F     LN H R HT E      
Sbjct: 2   SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.8 bits (138), Expect = 3e-11
 Identities = 13/42 (30%), Positives = 20/42 (47%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCE 237
              + T E+P  C+ CGK F     L +H+R+HT +      
Sbjct: 3   SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.6 bits (148), Expect = 9e-13
 Identities = 17/41 (41%), Positives = 23/41 (56%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHC 264
                 G++ Y C++CGK F+Q   L TH+R HTGE P   
Sbjct: 3   SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 5e-10
 Identities = 13/41 (31%), Positives = 19/41 (46%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVC 236
              +   E+   C  CGK F +   L  H R+HTG++P   
Sbjct: 3   SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.6 bits (148), Expect = 9e-13
 Identities = 18/42 (42%), Positives = 21/42 (50%)

Query: 223 EHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHC 264
                 TG+R Y C  CGK F QK  L+ H+R H GE P   
Sbjct: 2   SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.6 bits (135), Expect = 7e-11
 Identities = 16/41 (39%), Positives = 21/41 (51%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVC 236
              + T ER   CS CGK F +   L+ H RIH G++P   
Sbjct: 3   SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.6 bits (148), Expect = 1e-12
 Identities = 18/42 (42%), Positives = 24/42 (57%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCE 265
                +G++PY C  CGK F+QK  L+ H+R HTGE P    
Sbjct: 3   SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.8 bits (133), Expect = 1e-10
 Identities = 14/42 (33%), Positives = 22/42 (52%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCE 237
              + + E+P  C+ CGK F +   L+ H R HTG++P    
Sbjct: 3   SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 60.6 bits (148), Expect = 1e-12
 Identities = 16/41 (39%), Positives = 19/41 (46%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHC 264
                TG++PY C  C K F  K  L  H+R HTGE     
Sbjct: 3   SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 54.8 bits (133), Expect = 1e-10
 Identities = 13/41 (31%), Positives = 17/41 (41%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVC 236
              + T E+P  C+ C K F     L  H R HTG+     
Sbjct: 3   SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 36.3 bits (85), Expect = 5e-04
 Identities = 13/34 (38%), Positives = 19/34 (55%)

Query: 251 THKRGHTGEIPYHCEFCSERFSTKALVRHHVRSH 284
           +     TGE PY C  C + F+TK+ +  H R+H
Sbjct: 2   SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTH 35

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.6 bits (148), Expect = 1e-12
 Identities = 18/41 (43%), Positives = 23/41 (56%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHC 264
                TG++PY C  CGK F +K  L+ H+R HTGE P   
Sbjct: 3   SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.4 bits (137), Expect = 4e-11
 Identities = 17/41 (41%), Positives = 21/41 (51%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVC 236
              + T E+P  CS CGK F +   L  H RIHTG+ P   
Sbjct: 3   SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 60.6 bits (148), Expect = 1e-12
 Identities = 20/41 (48%), Positives = 22/41 (53%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHC 264
                TGQRPY C  CGK F  K +L  H+R HTGE P   
Sbjct: 3   SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 55.6 bits (135), Expect = 7e-11
 Identities = 15/41 (36%), Positives = 21/41 (51%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVC 236
              + T +RP  C  CGK F+   +L  H R HTG++P   
Sbjct: 3   SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.6 bits (148), Expect = 1e-12
 Identities = 16/42 (38%), Positives = 20/42 (47%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCE 265
                 G++PY C  CGK F+ K  L  H R H+GE P    
Sbjct: 3   SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPS 44

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.6 bits (135), Expect = 6e-11
 Identities = 14/42 (33%), Positives = 20/42 (47%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCE 237
              +   E+P  CS CGK F     L  H+R H+G++P    
Sbjct: 3   SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPS 44

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.8 bits (86), Expect = 4e-04
 Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 1/39 (2%)

Query: 172 THLGIK-FECEVCHRKLSTKNHLRLHMRTHTNERPAVCS 209
           +  G K + C  C +  S+K++L +HMRTH+ E+P+  S
Sbjct: 6   SGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPS 44

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 6e-04
 Identities = 12/34 (35%), Positives = 19/34 (55%)

Query: 251 THKRGHTGEIPYHCEFCSERFSTKALVRHHVRSH 284
           +      GE PY C  C + FS+K+ +  H+R+H
Sbjct: 2   SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTH 35

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 60.6 bits (148), Expect = 1e-12
 Identities = 18/41 (43%), Positives = 25/41 (60%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHC 264
                TG++P+ C  CGKGF+++ ALN H + HTGE P   
Sbjct: 3   SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 55.2 bits (134), Expect = 9e-11
 Identities = 17/41 (41%), Positives = 23/41 (56%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVC 236
              + T E+P  C  CGKGF R  AL  H ++HTG++P   
Sbjct: 3   SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.6 bits (148), Expect = 1e-12
 Identities = 17/41 (41%), Positives = 21/41 (51%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHC 264
                TG++PY C  CGK FT K  L  H++ HTGE     
Sbjct: 3   SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 2e-10
 Identities = 15/41 (36%), Positives = 19/41 (46%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVC 236
              + T E+P  CS CGK F     L  H + HTG+R    
Sbjct: 3   SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 9e-04
 Identities = 12/34 (35%), Positives = 18/34 (52%)

Query: 251 THKRGHTGEIPYHCEFCSERFSTKALVRHHVRSH 284
           +     TGE PY C  C + F+ K+ +R H + H
Sbjct: 2   SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCH 35

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.6 bits (148), Expect = 1e-12
 Identities = 20/42 (47%), Positives = 24/42 (57%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCE 265
                TG++PY+C  CGK F QK  LN H+R HTGE P    
Sbjct: 3   SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.6 bits (135), Expect = 6e-11
 Identities = 16/42 (38%), Positives = 23/42 (54%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCE 237
              + T E+P +C+ CGK F +   L  H RIHTG++P    
Sbjct: 3   SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.6 bits (148), Expect = 1e-12
 Identities = 19/41 (46%), Positives = 22/41 (53%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHC 264
                TG++PY C  CGK F QK  L  H+R HTGE P   
Sbjct: 3   SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.0 bits (136), Expect = 4e-11
 Identities = 17/41 (41%), Positives = 23/41 (56%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVC 236
              + T E+P  C  CGK F +   LT+H RIHTG++P   
Sbjct: 3   SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.2 bits (147), Expect = 1e-12
 Identities = 16/41 (39%), Positives = 22/41 (53%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHC 264
                TG++PY C++C K F    +L  H+R HTGE P   
Sbjct: 3   SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.8 bits (133), Expect = 1e-10
 Identities = 18/41 (43%), Positives = 23/41 (56%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVC 236
              + T E+P  C  C K FR G +LT H RIHTG++P   
Sbjct: 3   SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.2 bits (147), Expect = 1e-12
 Identities = 15/42 (35%), Positives = 22/42 (52%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCE 265
                TG++PY+C  CGK FT +  L  H++ HT + P    
Sbjct: 3   SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.8 bits (138), Expect = 3e-11
 Identities = 15/42 (35%), Positives = 22/42 (52%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCE 237
              + T E+P +C+ CGK F     L +H +IHT Q+P    
Sbjct: 3   SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.2 bits (147), Expect = 1e-12
 Identities = 18/42 (42%), Positives = 21/42 (50%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCE 265
                TG++PY CE CGK F     L  H+R HTGE P    
Sbjct: 3   SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.0 bits (136), Expect = 5e-11
 Identities = 17/42 (40%), Positives = 21/42 (50%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCE 237
              + T E+P  C  CGK F     L EH RIHTG++P    
Sbjct: 3   SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.2 bits (147), Expect = 1e-12
 Identities = 18/41 (43%), Positives = 25/41 (60%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHC 264
                +G++P+ CE CGK FTQ   L++H+R HTGE P   
Sbjct: 3   SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 4e-10
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVC 236
              + + E+P  C  CGK F +   L  H R+HTG++P   
Sbjct: 3   SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 60.3 bits (147), Expect = 1e-12
 Identities = 15/42 (35%), Positives = 22/42 (52%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCE 265
                +G++P+ CE CGKGF       +H+R H+GE P    
Sbjct: 3   SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 56.0 bits (136), Expect = 4e-11
 Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 1/45 (2%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEICG 240
              + + E+P  C  CGKGF        H R H+G++P      G
Sbjct: 3   SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS-SG 46

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 36.0 bits (84), Expect = 7e-04
 Identities = 12/34 (35%), Positives = 17/34 (50%)

Query: 251 THKRGHTGEIPYHCEFCSERFSTKALVRHHVRSH 284
           +     +GE P+ CE C + F T +    H RSH
Sbjct: 2   SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSH 35

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.2 bits (147), Expect = 1e-12
 Identities = 17/42 (40%), Positives = 20/42 (47%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCE 265
                TG++PY C  CGK F     L TH+  HTGE P    
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.0 bits (136), Expect = 5e-11
 Identities = 17/42 (40%), Positives = 22/42 (52%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCE 237
              + T E+P  C+ CGK FR    LT H  IHTG++P    
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.2 bits (147), Expect = 1e-12
 Identities = 16/42 (38%), Positives = 26/42 (61%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCE 265
                TG++PY C +CGK F+ +Q+L+ H+R H+G+ P    
Sbjct: 3   SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.6 bits (135), Expect = 6e-11
 Identities = 16/42 (38%), Positives = 23/42 (54%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCE 237
              + T E+P  CS CGK F    +L+ H RIH+G++P    
Sbjct: 3   SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.2 bits (147), Expect = 2e-12
 Identities = 17/41 (41%), Positives = 22/41 (53%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHC 264
                +G++PYVC+ CGK F     L  H+R HTGE P   
Sbjct: 3   SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.8 bits (138), Expect = 3e-11
 Identities = 17/41 (41%), Positives = 22/41 (53%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVC 236
              + + E+P VC YCGK F     L  H RIHTG++P   
Sbjct: 3   SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 60.2 bits (147), Expect = 2e-12
 Identities = 18/41 (43%), Positives = 19/41 (46%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHC 264
                TG +PYVC  CGK F  K  L  H R HTGE     
Sbjct: 3   SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 56.7 bits (138), Expect = 3e-11
 Identities = 15/41 (36%), Positives = 19/41 (46%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVC 236
              + T  +P VC+ CGK FR    L  H R HTG+     
Sbjct: 3   SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 60.3 bits (147), Expect = 2e-12
 Identities = 16/42 (38%), Positives = 21/42 (50%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCE 265
                TG++PY C+ CGK F     L  H+R H+GE P    
Sbjct: 3   SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 56.0 bits (136), Expect = 4e-11
 Identities = 15/42 (35%), Positives = 22/42 (52%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCE 237
              + T E+P  C  CGK FR    L +H R+H+G++P    
Sbjct: 3   SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.2 bits (147), Expect = 2e-12
 Identities = 15/41 (36%), Positives = 23/41 (56%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHC 264
                +G++PY C  CGKG+ ++  L+ H+R HTGE     
Sbjct: 3   SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGP 43

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.4 bits (137), Expect = 3e-11
 Identities = 14/41 (34%), Positives = 22/41 (53%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVC 236
              + + E+P  C  CGKG++R   L  H R+HTG++    
Sbjct: 3   SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGP 43

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 59.9 bits (146), Expect = 2e-12
 Identities = 18/41 (43%), Positives = 21/41 (51%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHC 264
                TGQ+P+ C  CGK F  K  L TH+R HTGE     
Sbjct: 3   SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 55.2 bits (134), Expect = 8e-11
 Identities = 15/41 (36%), Positives = 22/41 (53%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVC 236
              + T ++P  C++CGK FR    L  H RIHTG++    
Sbjct: 3   SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 59.9 bits (146), Expect = 2e-12
 Identities = 16/41 (39%), Positives = 19/41 (46%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHC 264
                TG +PY C  C K F+ K  L  H+R HTG  P   
Sbjct: 3   SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 54.8 bits (133), Expect = 1e-10
 Identities = 14/41 (34%), Positives = 17/41 (41%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVC 236
              + T  +P  CS C K F     L  H R HTG +P   
Sbjct: 3   SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 35.6 bits (83), Expect = 9e-04
 Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)

Query: 172 THLGIK-FECEVCHRKLSTKNHLRLHMRTHTNERPAVCS 209
           +  G+K + C  C +  S K+ L +H R+HT  +P+  S
Sbjct: 6   SGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPS 44

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.8 bits (146), Expect = 2e-12
 Identities = 17/42 (40%), Positives = 22/42 (52%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCE 265
                TG +PY+C  CGK F+   +L TH+  HTGE P    
Sbjct: 3   SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPS 44

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.6 bits (135), Expect = 6e-11
 Identities = 15/42 (35%), Positives = 22/42 (52%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCE 237
              + T  +P +C+ CGK F    +LT H  IHTG++P    
Sbjct: 3   SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPS 44

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 59.8 bits (146), Expect = 2e-12
 Identities = 17/42 (40%), Positives = 22/42 (52%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCE 265
                TG++P+ C  CGK F+    L TH+R HTGE P    
Sbjct: 3   SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS 44

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 56.0 bits (136), Expect = 6e-11
 Identities = 16/42 (38%), Positives = 21/42 (50%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCE 237
              + T E+P  C+ CGK F     L  H RIHTG++P    
Sbjct: 3   SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS 44

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.8 bits (146), Expect = 2e-12
 Identities = 16/42 (38%), Positives = 22/42 (52%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCE 265
                TG + + C  CGK FT+K  L+ H++ HTGE P    
Sbjct: 3   SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.6 bits (135), Expect = 7e-11
 Identities = 14/42 (33%), Positives = 21/42 (50%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCE 237
              + T  +   C+ CGK F R   L+ H +IHTG++P    
Sbjct: 3   SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.8 bits (146), Expect = 2e-12
 Identities = 15/42 (35%), Positives = 23/42 (54%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCE 265
                TG++PY C++C K F+   +L  H+R H+GE P    
Sbjct: 3   SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.4 bits (137), Expect = 4e-11
 Identities = 14/42 (33%), Positives = 22/42 (52%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCE 237
              + T E+P  C  C K F    +LT+H R+H+G++P    
Sbjct: 3   SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.5 bits (145), Expect = 3e-12
 Identities = 17/42 (40%), Positives = 22/42 (52%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCE 265
                TG++P+ C  CGK F+    LN H+R HTGE P    
Sbjct: 3   SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.0 bits (136), Expect = 5e-11
 Identities = 16/42 (38%), Positives = 21/42 (50%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCE 237
              + T E+P  C  CGK F     L +H RIHTG++P    
Sbjct: 3   SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.4 bits (145), Expect = 3e-12
 Identities = 15/41 (36%), Positives = 20/41 (48%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHC 264
                 G++ + C  C K FTQ  +L  H+R HTGE P   
Sbjct: 3   SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 2e-10
 Identities = 13/41 (31%), Positives = 21/41 (51%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVC 236
              +   ++   C+ C K F +  +LT H RIHTG++P   
Sbjct: 3   SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.4 bits (145), Expect = 3e-12
 Identities = 16/42 (38%), Positives = 21/42 (50%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCE 265
                +G++PY C  CGK F +   LN H+R HTG  P    
Sbjct: 3   SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.4 bits (137), Expect = 3e-11
 Identities = 19/42 (45%), Positives = 22/42 (52%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCE 237
              + + E+P  CS CGK F R   L EH RIHTG RP    
Sbjct: 3   SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.4 bits (145), Expect = 3e-12
 Identities = 18/41 (43%), Positives = 21/41 (51%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHC 264
                +G++PY C  CGK FTQ   L  H R HTGE P   
Sbjct: 3   SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 4e-10
 Identities = 16/41 (39%), Positives = 23/41 (56%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVC 236
              + + E+P  C+ CGK F +   LT H RIHTG++P   
Sbjct: 3   SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.1 bits (144), Expect = 3e-12
 Identities = 16/42 (38%), Positives = 23/42 (54%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCE 265
                TG++PY C  CGK F+ + +L TH+  HTG+ P    
Sbjct: 3   SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.5 bits (132), Expect = 2e-10
 Identities = 16/42 (38%), Positives = 22/42 (52%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCE 237
              + T E+P  C+ CGK F    +LT H  IHTG++P    
Sbjct: 3   SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.1 bits (144), Expect = 4e-12
 Identities = 18/42 (42%), Positives = 21/42 (50%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCE 265
                TG++PY C  CGK FTQ   L  H+  HTGE P    
Sbjct: 3   SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 4e-10
 Identities = 14/42 (33%), Positives = 21/42 (50%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCE 237
              + T ++P  C+ CGK F +   L  H  IHTG++P    
Sbjct: 3   SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.1 bits (144), Expect = 4e-12
 Identities = 18/42 (42%), Positives = 24/42 (57%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCE 265
                TG++PY C++C K FTQK  L  H++ HTGE P    
Sbjct: 3   SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.2 bits (134), Expect = 1e-10
 Identities = 13/42 (30%), Positives = 20/42 (47%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCE 237
              + T E+P  C  C K F +   L +H + HTG++P    
Sbjct: 3   SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.1 bits (144), Expect = 4e-12
 Identities = 15/41 (36%), Positives = 22/41 (53%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHC 264
                TG++ Y C+ CGK F++   L  H+R H+GE P   
Sbjct: 3   SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.4 bits (137), Expect = 4e-11
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVC 236
              + T E+   C  CGK F R   L +H R+H+G++P   
Sbjct: 3   SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.1 bits (144), Expect = 4e-12
 Identities = 17/41 (41%), Positives = 22/41 (53%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHC 264
                TG+ PY C  CGK F++K  L +H+R H GE P   
Sbjct: 3   SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.0 bits (136), Expect = 5e-11
 Identities = 15/41 (36%), Positives = 18/41 (43%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVC 236
              + T E P  C  CGK F R   L  H R H G++P   
Sbjct: 3   SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.1 bits (144), Expect = 4e-12
 Identities = 15/42 (35%), Positives = 20/42 (47%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCE 265
                TG++PY C  CGK F    +   H+R HTG+ P    
Sbjct: 3   SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.7 bits (135), Expect = 7e-11
 Identities = 17/42 (40%), Positives = 22/42 (52%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCE 237
              + T E+P  C  CGK F    + T+H R+HTGQRP    
Sbjct: 3   SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.7 bits (143), Expect = 4e-12
 Identities = 18/42 (42%), Positives = 21/42 (50%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCE 265
                TG+RP+ C  CGK F Q   L  H+R HTGE P    
Sbjct: 3   SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.8 bits (133), Expect = 1e-10
 Identities = 17/42 (40%), Positives = 23/42 (54%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCE 237
              + T ERP  C+ CGK F +   L +H RIHTG++P    
Sbjct: 3   SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.7 bits (143), Expect = 4e-12
 Identities = 18/42 (42%), Positives = 25/42 (59%)

Query: 223 EHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHC 264
                 +G++P+ CE CGK FTQ   L++H+R HTGE P   
Sbjct: 2   SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 5e-10
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVC 236
              + + E+P  C  CGK F +   L  H R+HTG++P   
Sbjct: 3   SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.7 bits (143), Expect = 4e-12
 Identities = 18/42 (42%), Positives = 22/42 (52%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCE 265
                TG++PY C  CGK F+Q   L  H+R HTGE P    
Sbjct: 3   SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS 44

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.4 bits (132), Expect = 2e-10
 Identities = 16/42 (38%), Positives = 22/42 (52%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCE 237
              + T E+P  C+ CGK F +   L  H RIHTG++P    
Sbjct: 3   SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS 44

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 58.7 bits (143), Expect = 5e-12
 Identities = 17/39 (43%), Positives = 20/39 (51%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPY 262
                 G++PY CEICG  F   Q L +H R HTG  P 
Sbjct: 2   SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 56.0 bits (136), Expect = 5e-11
 Identities = 15/39 (38%), Positives = 18/39 (46%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPY 234
              +   E+P  C  CG  FR    L  H+RIHTG  P 
Sbjct: 2   SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 39.0 bits (92), Expect = 5e-05
 Identities = 12/33 (36%), Positives = 15/33 (45%)

Query: 252 HKRGHTGEIPYHCEFCSERFSTKALVRHHVRSH 284
                 GE PY CE C  RF     ++ H+R H
Sbjct: 2   SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIH 34

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 38.2 bits (90), Expect = 8e-05
 Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 1/35 (2%)

Query: 172 THLGIK-FECEVCHRKLSTKNHLRLHMRTHTNERP 205
           +  G K + CE+C  +      L+ H+R HT   P
Sbjct: 5   SSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGP 39

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.7 bits (143), Expect = 5e-12
 Identities = 18/42 (42%), Positives = 21/42 (50%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCE 265
                TG +PY C  CGK F+Q   L  H+R HTGE P    
Sbjct: 3   SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.5 bits (132), Expect = 2e-10
 Identities = 14/42 (33%), Positives = 21/42 (50%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCE 237
              + T  +P  C+ CGK F +   L  H R+HTG++P    
Sbjct: 3   SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.7 bits (143), Expect = 5e-12
 Identities = 18/42 (42%), Positives = 21/42 (50%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCE 265
                TG++PY C  CGK FTQ   L  H+R HTG  P    
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 4e-10
 Identities = 16/42 (38%), Positives = 21/42 (50%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCE 237
              + T E+P  C+ CGK F +   L  H RIHTG +P    
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.7 bits (143), Expect = 5e-12
 Identities = 15/42 (35%), Positives = 20/42 (47%)

Query: 223 EHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHC 264
                 TG++PY C++CGK F     L  H   H+GE P   
Sbjct: 2   SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.2 bits (134), Expect = 9e-11
 Identities = 15/41 (36%), Positives = 21/41 (51%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVC 236
              + T E+P  C  CGK FR    L +H  +H+G+RP   
Sbjct: 3   SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 58.7 bits (143), Expect = 6e-12
 Identities = 15/42 (35%), Positives = 22/42 (52%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCE 265
                TG++ Y C  CGK F++   L+ H++ HTGE P    
Sbjct: 3   SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 55.2 bits (134), Expect = 9e-11
 Identities = 15/42 (35%), Positives = 23/42 (54%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCE 237
              + T E+   C+ CGK F R   L++H +IHTG++P    
Sbjct: 3   SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.7 bits (143), Expect = 6e-12
 Identities = 15/41 (36%), Positives = 21/41 (51%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHC 264
                TG++PY C  CGK F  + +L  H+  H+GE P   
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 2e-10
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVC 236
              + T E+P  C+ CGK FR   +L  H   H+G++P   
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 58.3 bits (142), Expect = 6e-12
 Identities = 17/39 (43%), Positives = 22/39 (56%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPY 262
                 G++PY C+ CGK F+QK +L  H R HTG  P 
Sbjct: 2   SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 53.0 bits (128), Expect = 6e-10
 Identities = 15/39 (38%), Positives = 20/39 (51%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPY 234
              +   E+P  C  CGK F +  +L  HIR+HTG  P 
Sbjct: 2   SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.3 bits (142), Expect = 7e-12
 Identities = 18/42 (42%), Positives = 21/42 (50%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCE 265
                TG++PY C  CGK FTQ   L  H+  HTGE P    
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 5e-10
 Identities = 15/42 (35%), Positives = 21/42 (50%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCE 237
              + T E+P  C+ CGK F +   L  H  IHTG++P    
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.3 bits (142), Expect = 7e-12
 Identities = 18/42 (42%), Positives = 21/42 (50%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCE 265
                TG++PY C  CGK FTQ   L  H+  HTGE P    
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 6e-10
 Identities = 15/42 (35%), Positives = 21/42 (50%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCE 237
              + T E+P  C+ CGK F +   L  H  IHTG++P    
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 58.9 bits (143), Expect = 8e-12
 Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 4/71 (5%)

Query: 190 KNHLRLHMRTHTNERPAVCSY--CGKGFRRGDALTEHIRIHTGQRPYVC--EICGKGFTQ 245
            +         +  R  +CS+  CGK + +   L  H R HTG++P+ C  + C + F +
Sbjct: 2   SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFAR 61

Query: 246 KQALNTHKRGH 256
              L+ H+R H
Sbjct: 62  SDELSRHRRTH 72

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 54.3 bits (131), Expect = 4e-10
 Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 4/69 (5%)

Query: 220 ALTEHIRIHTGQRPYVCEI--CGKGFTQKQALNTHKRGHTGEIPYHCEF--CSERFSTKA 275
             +      +  R ++C    CGK + +   L  H R HTGE P+ C +  C  RF+   
Sbjct: 4   GSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSD 63

Query: 276 LVRHHVRSH 284
            +  H R+H
Sbjct: 64  ELSRHRRTH 72

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 48.5 bits (116), Expect = 5e-08
 Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 2/48 (4%)

Query: 183 CHRKLSTKNHLRLHMRTHTNERPAVCSY--CGKGFRRGDALTEHIRIH 228
           C +     +HL+ H RTHT E+P  CS+  C + F R D L+ H R H
Sbjct: 25  CGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH 72

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.3 bits (142), Expect = 8e-12
 Identities = 16/41 (39%), Positives = 22/41 (53%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHC 264
                TG++P+ C  CGK + Q+  L  H+R HTGE P   
Sbjct: 3   SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.8 bits (133), Expect = 1e-10
 Identities = 15/41 (36%), Positives = 23/41 (56%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVC 236
              + T E+P  C  CGK + +   LT+H R+HTG++P   
Sbjct: 3   SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 57.9 bits (141), Expect = 8e-12
 Identities = 14/41 (34%), Positives = 18/41 (43%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHC 264
                +G++PY C  CGK F  K  L  H+R H G      
Sbjct: 3   SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 52.9 bits (128), Expect = 5e-10
 Identities = 12/41 (29%), Positives = 16/41 (39%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVC 236
              + + E+P  C+ CGK F     L  H R H G      
Sbjct: 3   SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.9 bits (141), Expect = 9e-12
 Identities = 17/42 (40%), Positives = 21/42 (50%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCE 265
                TG++PY C  CGK F     L+ H+R HTGE P    
Sbjct: 3   SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 2e-10
 Identities = 17/42 (40%), Positives = 23/42 (54%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCE 237
              + T E+P  C+ CGK FR    L+ H RIHTG++P    
Sbjct: 3   SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 57.9 bits (141), Expect = 9e-12
 Identities = 15/39 (38%), Positives = 17/39 (43%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPY 262
                 G++PY CE CG  F Q   L  H   HTG  P 
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 52.9 bits (128), Expect = 5e-10
 Identities = 13/39 (33%), Positives = 17/39 (43%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPY 234
              +   E+P  C  CG  F +   L  H+ IHTG  P 
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 1/35 (2%)

Query: 172 THLGIK-FECEVCHRKLSTKNHLRLHMRTHTNERP 205
           +  G K ++CE C  +     HLR H+  HT   P
Sbjct: 5   SSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGP 39

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 37.1 bits (87), Expect = 2e-04
 Identities = 14/33 (42%), Positives = 15/33 (45%)

Query: 252 HKRGHTGEIPYHCEFCSERFSTKALVRHHVRSH 284
                 GE PY CE C  RF   A +R HV  H
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIH 34

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.9 bits (141), Expect = 9e-12
 Identities = 16/42 (38%), Positives = 22/42 (52%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCE 265
                +G++P+ C+ CGK F Q   L +H R HTGE P    
Sbjct: 3   SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.8 bits (133), Expect = 1e-10
 Identities = 16/42 (38%), Positives = 23/42 (54%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCE 237
              + + E+P  C  CGK FR+   L  H+RIHTG++P    
Sbjct: 3   SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.9 bits (141), Expect = 1e-11
 Identities = 16/42 (38%), Positives = 20/42 (47%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCE 265
                TG++PY C  CGK F +   L  H+  HTGE P    
Sbjct: 3   SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.8 bits (133), Expect = 1e-10
 Identities = 17/42 (40%), Positives = 21/42 (50%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCE 237
              + T E+P  C  CGK FRR   L  H  IHTG++P    
Sbjct: 3   SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 57.9 bits (141), Expect = 1e-11
 Identities = 15/41 (36%), Positives = 18/41 (43%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHC 264
                 G+R + C  CGK F Q      H+R HTGE P   
Sbjct: 3   SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 54.9 bits (133), Expect = 1e-10
 Identities = 15/41 (36%), Positives = 20/41 (48%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVC 236
              +   ER   CS CGK F +     +H RIHTG++P   
Sbjct: 3   SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.9 bits (141), Expect = 1e-11
 Identities = 16/41 (39%), Positives = 21/41 (51%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHC 264
                TG++P+ C  CGK F+    L  H+R HTGE P   
Sbjct: 3   SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.9 bits (133), Expect = 1e-10
 Identities = 16/41 (39%), Positives = 19/41 (46%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVC 236
              + T E+P  C  CGK F     L  H RIHTG+ P   
Sbjct: 3   SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.5 bits (140), Expect = 1e-11
 Identities = 18/42 (42%), Positives = 21/42 (50%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCE 265
                TG++PY C  CGK FTQ   L  H+R HTG  P    
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPS 44

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 8e-10
 Identities = 15/42 (35%), Positives = 21/42 (50%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCE 237
              + T E+P  C+ CGK F +   L  H R+HTG +P    
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPS 44

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 57.7 bits (140), Expect = 1e-11
 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 2/44 (4%)

Query: 196 HMRTHTNERPAVCSY--CGKGFRRGDALTEHIRIHTGQRPYVCE 237
              + T E+P  C++  CG  F R D L+ H R H+G +P    
Sbjct: 3   SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 53.8 bits (130), Expect = 4e-10
 Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 2/44 (4%)

Query: 224 HIRIHTGQRPYVC--EICGKGFTQKQALNTHKRGHTGEIPYHCE 265
                TG++P+ C    CG  F++   L+ H+R H+G  P    
Sbjct: 3   SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 57.5 bits (140), Expect = 1e-11
 Identities = 18/41 (43%), Positives = 23/41 (56%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHC 264
                TG++PY C+ CGK F+Q   L  H+R HTGE P   
Sbjct: 3   SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 54.4 bits (132), Expect = 2e-10
 Identities = 15/41 (36%), Positives = 22/41 (53%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVC 236
              + T E+P  C  CGK F +   L +H R+HTG++P   
Sbjct: 3   SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.6 bits (140), Expect = 1e-11
 Identities = 14/41 (34%), Positives = 17/41 (41%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHC 264
                 G++PY C  CGK F+    L  H   HT E P   
Sbjct: 3   SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.6 bits (135), Expect = 7e-11
 Identities = 14/41 (34%), Positives = 19/41 (46%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVC 236
              +   E+P  CS CGK F     LT+H   HT ++P   
Sbjct: 3   SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 57.6 bits (140), Expect = 2e-11
 Identities = 16/41 (39%), Positives = 21/41 (51%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHC 264
                +  + + C  CG+GFT K  LN H+R HTGE P   
Sbjct: 3   SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 53.7 bits (130), Expect = 3e-10
 Identities = 13/41 (31%), Positives = 21/41 (51%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVC 236
              + ++ +   C  CG+GF     L +H RIHTG++P   
Sbjct: 3   SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%)

Query: 171 TTHLGIK-FECEVCHRKLSTKNHLRLHMRTHTNERPAVCS 209
           ++    K  +C  C R  + K+HL  H R HT E+P+  S
Sbjct: 5   SSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPS 44

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.1 bits (139), Expect = 2e-11
 Identities = 13/41 (31%), Positives = 17/41 (41%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHC 264
                +G+RPY C  CGK F +   L  H + H  E     
Sbjct: 3   SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.4 bits (137), Expect = 4e-11
 Identities = 13/41 (31%), Positives = 20/41 (48%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVC 236
              + + ERP  C+ CGK F R   L EH++ H  ++    
Sbjct: 3   SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.2 bits (139), Expect = 2e-11
 Identities = 14/41 (34%), Positives = 20/41 (48%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHC 264
                +G+RP+ C  CGKGF ++  L  H R H+ E     
Sbjct: 3   SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.5 bits (132), Expect = 2e-10
 Identities = 14/41 (34%), Positives = 22/41 (53%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVC 236
              + + ERP  C+ CGKGF R   L  H+R+H+ ++    
Sbjct: 3   SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.4 bits (85), Expect = 4e-04
 Identities = 11/40 (27%), Positives = 22/40 (55%), Gaps = 1/40 (2%)

Query: 171 TTHLGIK-FECEVCHRKLSTKNHLRLHMRTHTNERPAVCS 209
           ++  G + F+C  C +    ++HL  H+R H+ E+ +  S
Sbjct: 5   SSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS 44

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 57.2 bits (139), Expect = 2e-11
 Identities = 11/41 (26%), Positives = 17/41 (41%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHC 264
                 G++ + C  C   F+Q  +L  H+  H GE P   
Sbjct: 3   SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 52.9 bits (128), Expect = 6e-10
 Identities = 9/41 (21%), Positives = 16/41 (39%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVC 236
              +   E+   C  C   F +  +L  H  +H G++P   
Sbjct: 3   SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 35.6 bits (83), Expect = 9e-04
 Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 1/40 (2%)

Query: 171 TTHLGIK-FECEVCHRKLSTKNHLRLHMRTHTNERPAVCS 209
           ++ +G K ++C  C    S  + LRLH   H  E+P+  S
Sbjct: 5   SSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPS 44

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.2 bits (139), Expect = 2e-11
 Identities = 13/41 (31%), Positives = 17/41 (41%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHC 264
                TG++P  C  CGK F  K  L  H+R H  +     
Sbjct: 3   SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.9 bits (133), Expect = 1e-10
 Identities = 12/41 (29%), Positives = 16/41 (39%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVC 236
              + T E+P  C+ CGK F     L  H R H   +    
Sbjct: 3   SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 11/40 (27%), Positives = 21/40 (52%), Gaps = 1/40 (2%)

Query: 171 TTHLGIK-FECEVCHRKLSTKNHLRLHMRTHTNERPAVCS 209
           ++  G K  +C  C +    K+ L +H RTH +++ +  S
Sbjct: 5   SSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPS 44

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 56.4 bits (137), Expect = 3e-11
 Identities = 15/41 (36%), Positives = 17/41 (41%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHC 264
                 G  PY C  C K F+ K  L  H+R HT E P   
Sbjct: 3   SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 52.5 bits (127), Expect = 7e-10
 Identities = 12/41 (29%), Positives = 16/41 (39%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVC 236
              +     P  CS C K F     L  H R+HT ++P   
Sbjct: 3   SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 36.0 bits (84), Expect = 6e-04
 Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 1/40 (2%)

Query: 171 TTHLGIK-FECEVCHRKLSTKNHLRLHMRTHTNERPAVCS 209
           ++  G+  ++C  C +  S K  L +H R HT E+P+  S
Sbjct: 5   SSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPS 44

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 56.4 bits (137), Expect = 4e-11
 Identities = 15/39 (38%), Positives = 20/39 (51%)

Query: 226 RIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHC 264
              +G+ PY C  CGK F +K  L +H+R H GE     
Sbjct: 3   SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 54.8 bits (133), Expect = 1e-10
 Identities = 15/39 (38%), Positives = 17/39 (43%)

Query: 198 RTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVC 236
              + E P  CS CGK F R D L  H R H G+     
Sbjct: 3   SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.4 bits (137), Expect = 4e-11
 Identities = 17/42 (40%), Positives = 21/42 (50%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCE 265
                +G++PY C+ C K F Q   LN HKR HTGE      
Sbjct: 3   SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS 44

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.9 bits (133), Expect = 1e-10
 Identities = 12/42 (28%), Positives = 20/42 (47%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCE 237
              + + ++P  C  C K F +   L +H R+HTG+R     
Sbjct: 3   SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS 44

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 8e-04
 Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 1/40 (2%)

Query: 171 TTHLGIK-FECEVCHRKLSTKNHLRLHMRTHTNERPAVCS 209
           ++  G K +EC+ C +      HL  H R HT ER +  S
Sbjct: 5   SSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS 44

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 56.4 bits (137), Expect = 4e-11
 Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 1/42 (2%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRG-HTGEIPYHC 264
                TG++PY C  CGK F Q  +L  H R  HTGE P   
Sbjct: 3   SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 51.4 bits (124), Expect = 2e-09
 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 1/42 (2%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIR-IHTGQRPYVC 236
              + T ++P  C  CGK F +  +L  H R  HTG++P   
Sbjct: 3   SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 56.0 bits (136), Expect = 5e-11
 Identities = 14/41 (34%), Positives = 22/41 (53%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHC 264
                TG+ PY C  CGK F++K  L +H++ H+G+     
Sbjct: 3   SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 54.0 bits (131), Expect = 2e-10
 Identities = 15/41 (36%), Positives = 18/41 (43%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVC 236
              + T E P  C  CGK F R D L  H + H+GQ     
Sbjct: 3   SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 55.6 bits (135), Expect = 6e-11
 Identities = 12/39 (30%), Positives = 19/39 (48%)

Query: 226 RIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHC 264
              +G++P+ C  C K F+ K  L  H++ H  E P   
Sbjct: 3   SGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 50.2 bits (121), Expect = 5e-09
 Identities = 11/39 (28%), Positives = 16/39 (41%)

Query: 198 RTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVC 236
              + E+P  CS C K F     L  H + H  ++P   
Sbjct: 3   SGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 37.1 bits (87), Expect = 2e-04
 Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%)

Query: 170 NTTHLGIK-FECEVCHRKLSTKNHLRLHMRTHTNERPAVCS 209
           ++   G K F C  C +  S+K++L +H +TH  E+P+  S
Sbjct: 2   SSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPS 42

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 57.3 bits (138), Expect = 6e-11
 Identities = 18/75 (24%), Positives = 21/75 (28%), Gaps = 9/75 (12%)

Query: 199 THTNERPAVCSYCGKGFRRGDALTEHI-RIHTGQRPYV--------CEICGKGFTQKQAL 249
               +       C + F     L  H+   H G             C   GK F  K  L
Sbjct: 19  IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78

Query: 250 NTHKRGHTGEIPYHC 264
             H R HTGE     
Sbjct: 79  VNHIRVHTGEKSGPS 93

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 47.7 bits (113), Expect = 2e-07
 Identities = 18/68 (26%), Positives = 25/68 (36%), Gaps = 9/68 (13%)

Query: 178 FECEVCHRKLSTKNHLRLHM-RTHTNERP--------AVCSYCGKGFRRGDALTEHIRIH 228
              + C R  ST + L  H+   H               C   GK F+    L  HIR+H
Sbjct: 26  RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVH 85

Query: 229 TGQRPYVC 236
           TG++    
Sbjct: 86  TGEKSGPS 93

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 41.5 bits (97), Expect = 2e-05
 Identities = 16/74 (21%), Positives = 23/74 (31%), Gaps = 15/74 (20%)

Query: 151 HNAPPFECESCKKIFT------YHKNTTHLGIK---------FECEVCHRKLSTKNHLRL 195
                   +SC + F+       H    H+G            EC    +    K  L  
Sbjct: 21  EAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVN 80

Query: 196 HMRTHTNERPAVCS 209
           H+R HT E+    S
Sbjct: 81  HIRVHTGEKSGPSS 94

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 39.2 bits (91), Expect = 2e-04
 Identities = 15/67 (22%), Positives = 22/67 (32%), Gaps = 9/67 (13%)

Query: 227 IHTGQRPYVCEICGKGFTQKQALNTH-KRGHTGEIPYHCEFCSER--------FSTKALV 277
           I   Q     + C + F+    L TH    H G    +   C           F  K  +
Sbjct: 19  IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78

Query: 278 RHHVRSH 284
            +H+R H
Sbjct: 79  VNHIRVH 85

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.7 bits (135), Expect = 6e-11
 Identities = 12/41 (29%), Positives = 18/41 (43%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHC 264
                TG++P+ C+ CG  F+   +L  H R H    P   
Sbjct: 3   SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.6 bits (127), Expect = 8e-10
 Identities = 12/41 (29%), Positives = 17/41 (41%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVC 236
              + T E+P  C  CG  F    +L +H+R H    P   
Sbjct: 3   SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.2 bits (87), Expect = 3e-04
 Identities = 12/34 (35%), Positives = 17/34 (50%)

Query: 251 THKRGHTGEIPYHCEFCSERFSTKALVRHHVRSH 284
           +     TGE P+ C+ C   FS    +  H+RSH
Sbjct: 2   SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSH 35

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.4 bits (85), Expect = 5e-04
 Identities = 12/40 (30%), Positives = 19/40 (47%), Gaps = 1/40 (2%)

Query: 171 TTHLGIK-FECEVCHRKLSTKNHLRLHMRTHTNERPAVCS 209
           ++  G K F+C+ C    S    L  H+R+H    P+  S
Sbjct: 5   SSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS 44

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 55.4 bits (133), Expect = 2e-10
 Identities = 18/71 (25%), Positives = 27/71 (38%), Gaps = 7/71 (9%)

Query: 192 HLRLHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNT 251
                 + H  +R   CS CG  F R   L+         +  +CE C K   Q+ ALN 
Sbjct: 5   SSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRR-------KTPMCEKCRKDSCQEAALNK 57

Query: 252 HKRGHTGEIPY 262
            +   +G+   
Sbjct: 58  DEGNESGKKTS 68

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 44.7 bits (105), Expect = 1e-06
 Identities = 14/65 (21%), Positives = 24/65 (36%), Gaps = 7/65 (10%)

Query: 220 ALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTKALVRH 279
           +  +  +IH G R   C  CG  F ++  L+  K          CE C +    +A +  
Sbjct: 5   SSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRRK-------TPMCEKCRKDSCQEAALNK 57

Query: 280 HVRSH 284
              + 
Sbjct: 58  DEGNE 62

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 54.5 bits (132), Expect = 2e-10
 Identities = 13/42 (30%), Positives = 19/42 (45%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCE 265
                +G++ + C+ CGK F    AL  H+R H GE      
Sbjct: 3   SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 50.7 bits (122), Expect = 5e-09
 Identities = 12/42 (28%), Positives = 18/42 (42%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCE 237
              + + E+   C  CGK F    AL  H R+H G++     
Sbjct: 3   SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 53.8 bits (130), Expect = 3e-10
 Identities = 14/39 (35%), Positives = 20/39 (51%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPY 262
                 G+ PY+C  CGK FTQ+ +L  H+R  +   P 
Sbjct: 2   SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPS 40

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 46.9 bits (112), Expect = 9e-08
 Identities = 11/39 (28%), Positives = 16/39 (41%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPY 234
              +   E P +C  CGK F +  +L  H R  +   P 
Sbjct: 2   SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPS 40

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 53.0 bits (128), Expect = 6e-10
 Identities = 18/37 (48%), Positives = 22/37 (59%)

Query: 226 RIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPY 262
              +GQR Y C+ CGK F QK +L  H+R HTG  P 
Sbjct: 3   SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPS 39

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 51.0 bits (123), Expect = 3e-09
 Identities = 16/37 (43%), Positives = 20/37 (54%)

Query: 198 RTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPY 234
              + +R   C  CGK FR+  +LT H RIHTG  P 
Sbjct: 3   SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPS 39

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 52.2 bits (126), Expect = 9e-10
 Identities = 12/42 (28%), Positives = 17/42 (40%)

Query: 223 EHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHC 264
                 T  + Y C  CGK FT+   L  H++ HT +     
Sbjct: 2   SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 50.3 bits (121), Expect = 5e-09
 Identities = 13/41 (31%), Positives = 19/41 (46%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVC 236
              + T+ +   C+ CGK F R   LT H +IHT +     
Sbjct: 3   SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 51.6 bits (123), Expect = 2e-09
 Identities = 18/53 (33%), Positives = 23/53 (43%)

Query: 207 VCSYCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGE 259
           +C  CG   ++   L +HIR HT  RPY C  C   F  K  L  H +     
Sbjct: 3   ICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHS 55

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 47.8 bits (113), Expect = 5e-08
 Identities = 20/51 (39%), Positives = 27/51 (52%)

Query: 234 YVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTKALVRHHVRSH 284
           Y+CE CG    +   L  H R HT   PYHC +C+  F TK  +  H++S 
Sbjct: 2   YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSK 52

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 46.2 bits (109), Expect = 2e-07
 Identities = 19/54 (35%), Positives = 30/54 (55%)

Query: 177 KFECEVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTG 230
           K+ CE C  +    + L+ H+RTHT+ RP  C+YC   F+    LT+H++    
Sbjct: 1   KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 54

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 48.1 bits (115), Expect = 3e-08
 Identities = 10/39 (25%), Positives = 18/39 (46%)

Query: 226 RIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHC 264
              +G++PY C  C + F+    L  H++ HT +     
Sbjct: 3   SGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 45.4 bits (108), Expect = 3e-07
 Identities = 9/39 (23%), Positives = 18/39 (46%)

Query: 198 RTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVC 236
              + E+P  C+ C + F   + L +H ++HT +     
Sbjct: 3   SGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 46.1 bits (109), Expect = 2e-07
 Identities = 17/43 (39%), Positives = 20/43 (46%)

Query: 226 RIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCS 268
                ++   CEICGK F     LN HK  H+GE PY     S
Sbjct: 5   SSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS 47

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 43.8 bits (103), Expect = 1e-06
 Identities = 12/42 (28%), Positives = 17/42 (40%)

Query: 198 RTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEIC 239
            +    +   C  CGK FR    L  H   H+G++PY     
Sbjct: 5   SSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 46.1 bits (108), Expect = 1e-06
 Identities = 16/71 (22%), Positives = 26/71 (36%), Gaps = 2/71 (2%)

Query: 182 VCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEICGK 241
           + + +L  ++     +         VC  C   F    +L +HIR        VC +C K
Sbjct: 51  IHNPQLLDESSYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYTE--HTKVCPVCKK 108

Query: 242 GFTQKQALNTH 252
            FT   +   H
Sbjct: 109 EFTSTDSALDH 119

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 44.9 bits (105), Expect = 3e-06
 Identities = 17/111 (15%), Positives = 31/111 (27%), Gaps = 6/111 (5%)

Query: 183 CHRKLSTKNHLRLHMRTHTNERPAVC----SYCGKGFRRGDALTEHIRIHTGQRPYVCEI 238
               ++ +   R H  T   +R                   +    +        +VC +
Sbjct: 20  IFIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLASKAISQFVCPL 79

Query: 239 CGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTKALVRHHVRSHHSSAR 289
           C   F+   +L  H R         C  C + F++      HV   H+   
Sbjct: 80  CLMPFSSSVSLKQHIRYTEH--TKVCPVCKKEFTSTDSALDHVCKKHNICV 128

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 44.9 bits (105), Expect = 3e-06
 Identities = 16/65 (24%), Positives = 27/65 (41%), Gaps = 2/65 (3%)

Query: 162 KKIFTYHKNTTHLGIKFECEVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGDAL 221
           +  + Y    +    +F C +C    S+   L+ H+R    E   VC  C K F   D+ 
Sbjct: 59  ESSYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSA 116

Query: 222 TEHIR 226
            +H+ 
Sbjct: 117 LDHVC 121

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 44.9 bits (105), Expect = 2e-06
 Identities = 20/86 (23%), Positives = 32/86 (37%), Gaps = 3/86 (3%)

Query: 168 HKNTTHLGIKFECEVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGDALTEHIRI 227
             +       ++C +C+ KLS+      H R   N   AVC YC   F   +   EH   
Sbjct: 7   GASPVENKEVYQCRLCNAKLSSLLEQGSHERLCRNA--AVCPYCSLRFFSPELKQEH-ES 63

Query: 228 HTGQRPYVCEICGKGFTQKQALNTHK 253
               +   C  C + F    ++  H+
Sbjct: 64  KCEYKKLTCLECMRTFKSSFSIWRHQ 89

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 40.3 bits (93), Expect = 7e-05
 Identities = 15/85 (17%), Positives = 22/85 (25%), Gaps = 3/85 (3%)

Query: 202 NERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIP 261
           N+    C  C            H R+   +   VC  C   F   +    H         
Sbjct: 13  NKEVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEH-ESKCEYKK 69

Query: 262 YHCEFCSERFSTKALVRHHVRSHHS 286
             C  C   F +   +  H    H+
Sbjct: 70  LTCLECMRTFKSSFSIWRHQVEVHN 94

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 41.6 bits (98), Expect = 5e-06
 Identities = 11/33 (33%), Positives = 14/33 (42%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIH 228
             R  T  +P  C  C + F R D L  H + H
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 41.2 bits (97), Expect = 8e-06
 Identities = 10/33 (30%), Positives = 17/33 (51%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGH 256
             R  TG +P+ C  C + F++   L  H++ H
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 41.0 bits (96), Expect = 9e-06
 Identities = 11/36 (30%), Positives = 17/36 (47%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGE 259
                 G+ P+ C  C + FTQ+  L  H+R H  +
Sbjct: 3   SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARK 38

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 39.5 bits (92), Expect = 4e-05
 Identities = 10/38 (26%), Positives = 16/38 (42%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRP 233
              +   E P  CS C + F + + L +H R H  +  
Sbjct: 3   SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSG 40

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A Length = 31

 Score = 37.2 bits (87), Expect = 2e-04
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 2/31 (6%)

Query: 204 RPAVCSY--CGKGFRRGDALTEHIRIHTGQR 232
           RP +C++  CGK F R D L  H R HTG++
Sbjct: 1   RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>1ej6_B Lambda1; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_V Length = 1275

 Score = 40.6 bits (94), Expect = 6e-04
 Identities = 11/57 (19%), Positives = 17/57 (29%)

Query: 236 CEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTKALVRHHVRSHHSSARLGL 292
            E      ++  A        +    Y C  CS    +   +  HV SH     + L
Sbjct: 155 AEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASHGLHGNMTL 211

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	306
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.97
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.97
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.95
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.93
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.91
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.91
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.9
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.9
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.9
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.88
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.88
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.87
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.87
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.86
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.81
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.8
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.8
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.79
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.79
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.79
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.79
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.78
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.78
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.78
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.77
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.77
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.74
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.73
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.71
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.71
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.7
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.7
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.7
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.7
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.7
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.69
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.69
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.66
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.64
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.64
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.62
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.62
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.61
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.6
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.59
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.58
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.58
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.55
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.55
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.55
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.52
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.52
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.52
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.51
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.51
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.51
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.5
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.5
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.49
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.49
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.48
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.48
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.48
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.45
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.45
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.45
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.45
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.44
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.43
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.42
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.41
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.39
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.39
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.38
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.34
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.33
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.31
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.31
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.29
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.28
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.23
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.22
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.19
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.19
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.19
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.19
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.19
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.18
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.18
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.18
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.18
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.18
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.18
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.18
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.18
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.18
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.18
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.17
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.17
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.17
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.17
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.17
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.17
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.17
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.17
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.17
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.17
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.16
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.16
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.16
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.16
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.16
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.16
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.16
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.16
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.15
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.15
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.15
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.15
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.15
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.15
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.14
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.14
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.14
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.14
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.14
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.13
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.13
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.13
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.13
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.12
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.12
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.12
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.12
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.12
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.11
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.11
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.11
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.11
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.11
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.11
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.11
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.11
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.11
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.11
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.11
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.11
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.11
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.1
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.1
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.1
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.1
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.1
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.1
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.1
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.1
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.09
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.09
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.09
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.09
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.09
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.09
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.09
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.09
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.09
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.09
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.09
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.08
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.08
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.08
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.08
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.08
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.08
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.07
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.07
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.07
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.07
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.06
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.06
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.06
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.05
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.05
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.05
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.05
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.04
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.04
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.04
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.04
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.04
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.04
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.03
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.03
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.03
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.03
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.03
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.03
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.03
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.02
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.02
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.02
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.02
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.02
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.02
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.02
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.01
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.01
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.01
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.01
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.01
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.01
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.01
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.0
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.0
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.0
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.0
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.99
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.99
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.99
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.98
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.98
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.98
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.98
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.98
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.98
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.98
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.98
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.98
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.97
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.97
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.97
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.97
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.97
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.96
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.96
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.96
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.96
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.96
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.96
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.96
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.96
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.95
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.95
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.95
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.95
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.95
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.95
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.94
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.94
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.94
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.93
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.93
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.93
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.93
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.93
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.93
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.93
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.93
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.92
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.92
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.92
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.92
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.92
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.92
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.92
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.92
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.91
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.91
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.91
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.9
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.9
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.9
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.9
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.89
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.89
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.88
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.88
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.88
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.88
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.87
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.87
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.84
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.83
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.82
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.82
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.82
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.81
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.79
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.78
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.77
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.74
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.65
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.61
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.61
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.58
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.56
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.56
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.56
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.55
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.54
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.54
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.53
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.46
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.45
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.42
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.41
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.4
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.39
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.38
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.37
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.37
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.36
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.36
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.35
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.35
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.3
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.28
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.27
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.26
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.25
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.24
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.21
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.21
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.21
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.21
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.2
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.2
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.18
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.15
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.15
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.15
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.14
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.12
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.11
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.09
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.08
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.07
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.07
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.06
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.06
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.06
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.04
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.04
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.04
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.04
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.03
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.02
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.25
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	97.99
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	97.98
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.21
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	97.95
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.95
1ard_A	29	Yeast transcription factor ADR1; transcription reg	97.94
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	97.94
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	97.94
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	97.93
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	97.92
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	97.92
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.09
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	97.87
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	97.86
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	97.86
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	97.86
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.06
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.03
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.82
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	96.95
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.69
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.66
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.49
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.46
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.37
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	96.42
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.14
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	96.0
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	95.99
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	95.79
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	95.4
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	94.82
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	94.48
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	92.81
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	89.7
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	88.95
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	86.46
2k5c_A	95	Uncharacterized protein PF0385; structural genomic	84.24
2yuc_A	76	TNF receptor-associated factor 4; ZF-TRAF, cystein	83.75
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	82.2
2jvx_A	28	NF-kappa-B essential modulator; CCHC classical zin	81.87
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	80.14

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=2.9e-38  Score=252.26  Aligned_cols=184  Identities=35%  Similarity=0.677  Sum_probs=99.3

Q ss_pred             HHHHHHhhhcCCCCceecccchhccCChHHHhhhhhhcccCCcccCCCChhhhccHHHHHHHHHhcccCCccccCcchhh
Q psy4573          57 SGLKIHMKSHTLSKRYACSICLAEFHTLTEKDRHTLSHVVEGEYKCNQCDHVAKKLAYLQAHMKKHRNEYTAYCDLCQEG  136 (306)
Q Consensus        57 ~~l~~H~~~h~~~~~~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~  136 (306)
                      ..|..|+..+.++++|.|.+|++.|.....|..|++.|.+..+|.|++|++.|.+...|..|++.|.++.+         
T Consensus         7 ~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~---------   77 (190)
T 2i13_A            7 SSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKP---------   77 (190)
T ss_dssp             ------------------------CCSSHHHHHGGGCC---CCEECTTTCCEESSHHHHHHHHHHHHCCCC---------
T ss_pred             ccchhhhhhcCCCCCCcCCCCccccCCHHHHHHHHHHcCCCCCccCCCcCchhCCHHHHHHHHHhcCCCCC---------
Confidence            34445555555555555555555555555555555555555555555555555555555555554444433         


Q ss_pred             ccchHHHHHHhhhcCCCCCcccccccccccccccccccCcceeccccccccCChHHHHHHHhhccCCCCcccCcCCCccC
Q psy4573         137 FFRKAKYETHNIQKHNAPPFECESCKKIFTYHKNTTHLGIKFECEVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFR  216 (306)
Q Consensus       137 ~~~~~~l~~H~~~~h~~~~~~c~~c~~~f~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~  216 (306)
                                                               |.|+.|++.|.+...|..|++.|.++++|.|.+|++.|.
T Consensus        78 -----------------------------------------~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~  116 (190)
T 2i13_A           78 -----------------------------------------YKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFS  116 (190)
T ss_dssp             -----------------------------------------EECTTTCCEESCHHHHHHHHHHHHTCCCEECTTTCCEES
T ss_pred             -----------------------------------------ccCcccCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccC
Confidence                                                     445555555566666666677776777777777777777


Q ss_pred             CcHHHHHHHHHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCCcchHhhcChHHHHHHhhhcCCCCCC
Q psy4573         217 RGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTKALVRHHVRSHHSSARL  290 (306)
Q Consensus       217 ~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~  290 (306)
                      +...|..|+++|+++++|.|++|++.|.+...|..|++.|+++++|.|++|+++|.....|..|+++|+++.+|
T Consensus       117 ~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~  190 (190)
T 2i13_A          117 QLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTGKKTS  190 (190)
T ss_dssp             SHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHTTC------
T ss_pred             CHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCCeECCCCCCccCCHHHHHHHHHhcCCCCCC
Confidence            77777777777777777777777777777777777777777777777777777777777777777777766543

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=1e-37  Score=249.07  Aligned_cols=181  Identities=38%  Similarity=0.686  Sum_probs=129.2

Q ss_pred             hhhhhhhhcCCcccccccccccCChHHHHHHhhhcCCCCceecccchhccCChHHHhhhhhhcccCCcccCCCChhhhcc
Q psy4573          32 AKKCREVEQDGSLACNVCSKRCGSKSGLKIHMKSHTLSKRYACSICLAEFHTLTEKDRHTLSHVVEGEYKCNQCDHVAKK  111 (306)
Q Consensus        32 ~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~  111 (306)
                      ..+.....++++|.|+.|++.|.+...|..|++.|.++.+|.|.+|++.|.+...|..|++.|.+..+|.|++|++.|.+
T Consensus        10 ~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~   89 (190)
T 2i13_A           10 VAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQ   89 (190)
T ss_dssp             ---------------------CCSSHHHHHGGGCC---CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESC
T ss_pred             hhhhhhcCCCCCCcCCCCccccCCHHHHHHHHHHcCCCCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCCccCC
Confidence            34455667789999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhcccCCccccCcchhhccchHHHHHHhhhcCCCCCcccccccccccccccccccCcceeccccccccCChH
Q psy4573         112 LAYLQAHMKKHRNEYTAYCDLCQEGFFRKAKYETHNIQKHNAPPFECESCKKIFTYHKNTTHLGIKFECEVCHRKLSTKN  191 (306)
Q Consensus       112 ~~~l~~H~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~~h~~~~~~c~~c~~~f~~~~~~~~~~~~~~C~~C~~~f~~~~  191 (306)
                      ...|..|++.|+++.+|                                                  .|+.|++.|.+..
T Consensus        90 ~~~l~~H~~~h~~~~~~--------------------------------------------------~C~~C~~~f~~~~  119 (190)
T 2i13_A           90 RANLRAHQRTHTGEKPY--------------------------------------------------ACPECGKSFSQLA  119 (190)
T ss_dssp             HHHHHHHHHHHHTCCCE--------------------------------------------------ECTTTCCEESSHH
T ss_pred             HHHHHHHHHhcCCCCCC--------------------------------------------------cCCCCCCccCCHH
Confidence            99999999888766554                                                  4555555555566


Q ss_pred             HHHHHHhhccCCCCcccCcCCCccCCcHHHHHHHHHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcc
Q psy4573         192 HLRLHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPY  262 (306)
Q Consensus       192 ~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~  262 (306)
                      .|..|+++|+++++|.|++|++.|.+...|..|+++|+++++|.|++|++.|.+...|..|+++|++++||
T Consensus       120 ~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~  190 (190)
T 2i13_A          120 HLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTGKKTS  190 (190)
T ss_dssp             HHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHTTC------
T ss_pred             HHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCCeECCCCCCccCCHHHHHHHHHhcCCCCCC
Confidence            67777777777778888888888888888888888888888888888888888888888888888887764

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.97  E-value=2.2e-31  Score=212.33  Aligned_cols=167  Identities=33%  Similarity=0.590  Sum_probs=129.5

Q ss_pred             cCCcccC--CCChhhhccHHHHHHHHHhcccCCcccc--CcchhhccchHHHHHHhhhcCCCCCcccccccccccccccc
Q psy4573          96 VEGEYKC--NQCDHVAKKLAYLQAHMKKHRNEYTAYC--DLCQEGFFRKAKYETHNIQKHNAPPFECESCKKIFTYHKNT  171 (306)
Q Consensus        96 ~~~~~~C--~~C~~~f~~~~~l~~H~~~~~~~~~~~C--~~C~~~~~~~~~l~~H~~~~h~~~~~~c~~c~~~f~~~~~~  171 (306)
                      ..++|.|  +.|++.|.+...|..|++.|.++++|.|  +.|++.|.+...|..|+..+++++                 
T Consensus         9 ~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~-----------------   71 (190)
T 1tf6_A            9 VYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEK-----------------   71 (190)
T ss_dssp             -CCCCBCSSTTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCC-----------------
T ss_pred             CCcceeCCCCCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCC-----------------
Confidence            3556777  5677777777777777777777777777  667777777777777766665554                 


Q ss_pred             cccCcceecc--ccccccCChHHHHHHH-hhc-cCCCCccc--CcCCCccCCcHHHHHHHHHccCCCCcccCc--ccCcC
Q psy4573         172 THLGIKFECE--VCHRKLSTKNHLRLHM-RTH-TNERPAVC--SYCGKGFRRGDALTEHIRIHTGQRPYVCEI--CGKGF  243 (306)
Q Consensus       172 ~~~~~~~~C~--~C~~~f~~~~~l~~H~-~~h-~~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f  243 (306)
                           +|.|+  .|++.|.+...|..|+ +.| .++++|.|  ..|++.|.+...|..|+++|+++++|.|++  |++.|
T Consensus        72 -----~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F  146 (190)
T 1tf6_A           72 -----NFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRF  146 (190)
T ss_dssp             -----CEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBC
T ss_pred             -----ceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchh
Confidence                 35566  6777777788888888 556 35678888  788888888888888888888888888877  88888


Q ss_pred             CChhHHHHHHhhccCCCcccCCc---chHhhcChHHHHHHhhhcCCC
Q psy4573         244 TQKQALNTHKRGHTGEIPYHCEF---CSERFSTKALVRHHVRSHHSS  287 (306)
Q Consensus       244 ~~~~~L~~H~~~h~~~~~~~C~~---C~~~f~~~~~l~~H~~~~h~~  287 (306)
                      .....|..|+++|++   |.|..   |++.|.....|..|+++||++
T Consensus       147 ~~~~~L~~H~~~H~~---~~C~~~~~C~~~f~~~~~l~~H~~~h~~e  190 (190)
T 1tf6_A          147 SLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLYLKHVAECHQD  190 (190)
T ss_dssp             SSHHHHHHHHTSSCS---CCCCSTTTCCCCCSCHHHHHHHHTTCC--
T ss_pred             cCHHHHHHHHHHhCC---CcCCCCCcCCCccccHHHHHHHHHhhcCC
Confidence            888888888888887   88888   888888888888888888763

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.97  E-value=2.4e-30  Score=206.25  Aligned_cols=169  Identities=26%  Similarity=0.474  Sum_probs=121.8

Q ss_pred             cCCcccc--cccccccCChHHHHHHhhhcCCCCceec--ccchhccCChHHHhhhhhhcccCCcccCC--CChhhhccHH
Q psy4573          40 QDGSLAC--NVCSKRCGSKSGLKIHMKSHTLSKRYAC--SICLAEFHTLTEKDRHTLSHVVEGEYKCN--QCDHVAKKLA  113 (306)
Q Consensus        40 ~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C--~~C~~~~~~~~~l~~H~~~~~~~~~~~C~--~C~~~f~~~~  113 (306)
                      ..++|.|  +.|++.|.+...|..|++.|.++.+|.|  .+|++.|.+...|..|++.|.+..+|.|+  .|++.|.+..
T Consensus         9 ~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~   88 (190)
T 1tf6_A            9 VYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKA   88 (190)
T ss_dssp             -CCCCBCSSTTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHH
T ss_pred             CCcceeCCCCCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHH
Confidence            4566777  5677777777777777766666666666  55666666666666666666555555555  5555555555


Q ss_pred             HHHHHHHhcccCCccccCcchhhccchHHHHHHhhhcCCCCCcccccccccccccccccccCcceec--cccccccCChH
Q psy4573         114 YLQAHMKKHRNEYTAYCDLCQEGFFRKAKYETHNIQKHNAPPFECESCKKIFTYHKNTTHLGIKFEC--EVCHRKLSTKN  191 (306)
Q Consensus       114 ~l~~H~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~~h~~~~~~c~~c~~~f~~~~~~~~~~~~~~C--~~C~~~f~~~~  191 (306)
                      .|..|+                            ...|..                    ...+|.|  +.|++.|.+..
T Consensus        89 ~l~~H~----------------------------~~~h~~--------------------~~~~~~C~~~~C~k~f~~~~  120 (190)
T 1tf6_A           89 NMKKHF----------------------------NRFHNI--------------------KICVYVCHFENCGKAFKKHN  120 (190)
T ss_dssp             HHHHHH----------------------------HTTSST--------------------TTSCCEECSSSSCEECSSHH
T ss_pred             HHHHHH----------------------------HHhcCC--------------------CcceeeCCCCCCccccCCHH
Confidence            555555                            233310                    0125777  77888888888


Q ss_pred             HHHHHHhhccCCCCcccCc--CCCccCCcHHHHHHHHHccCCCCcccCc---ccCcCCChhHHHHHHhhccCC
Q psy4573         192 HLRLHMRTHTNERPAVCSY--CGKGFRRGDALTEHIRIHTGQRPYVCEI---CGKGFTQKQALNTHKRGHTGE  259 (306)
Q Consensus       192 ~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~---C~~~f~~~~~L~~H~~~h~~~  259 (306)
                      .|..|+++|+++++|.|+.  |++.|.+...|..|+++|++   |.|..   |++.|.....|..|++.|+++
T Consensus       121 ~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~---~~C~~~~~C~~~f~~~~~l~~H~~~h~~e  190 (190)
T 1tf6_A          121 QLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLYLKHVAECHQD  190 (190)
T ss_dssp             HHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS---CCCCSTTTCCCCCSCHHHHHHHHTTCC--
T ss_pred             HHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCC---CcCCCCCcCCCccccHHHHHHHHHhhcCC
Confidence            9999999999999999987  99999999999999999887   88998   999999999999999998864

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.95  E-value=3.4e-28  Score=187.35  Aligned_cols=144  Identities=32%  Similarity=0.683  Sum_probs=125.2

Q ss_pred             CccccCcchhhccchHHHHHHhhh---cCCCCCcccccccccccccccccccCcceeccccccccCChHHHHHHHhhccC
Q psy4573         126 YTAYCDLCQEGFFRKAKYETHNIQ---KHNAPPFECESCKKIFTYHKNTTHLGIKFECEVCHRKLSTKNHLRLHMRTHTN  202 (306)
Q Consensus       126 ~~~~C~~C~~~~~~~~~l~~H~~~---~h~~~~~~c~~c~~~f~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  202 (306)
                      .++.|+.|++.|.+...|..|+..   +.++++|.|..|+                 |..|++.|.+...|..|++.|.+
T Consensus         2 ~~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~-----------------C~~c~~~f~~~~~l~~H~~~h~~   64 (155)
T 2gli_A            2 TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGG-----------------CSRELRPFKAQYMLVVHMRRHTG   64 (155)
T ss_dssp             CBCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTT-----------------CTTTTCCCSSHHHHHHHTHHHHC
T ss_pred             CcCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCC-----------------ccchhhhhhhHHHHHHHHHhcCC
Confidence            356667777777777777777663   3355666666543                 77888999999999999999999


Q ss_pred             CCCcccCc--CCCccCCcHHHHHHHHHccCCCCcccCc--ccCcCCChhHHHHHH-hhccCCCcccCCc--chHhhcChH
Q psy4573         203 ERPAVCSY--CGKGFRRGDALTEHIRIHTGQRPYVCEI--CGKGFTQKQALNTHK-RGHTGEIPYHCEF--CSERFSTKA  275 (306)
Q Consensus       203 ~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~-~~h~~~~~~~C~~--C~~~f~~~~  275 (306)
                      +++|.|.+  |++.|.+...|..|+++|+++++|.|++  |++.|.+...|..|+ +.|.++++|.|++  |+++|.+..
T Consensus        65 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~  144 (155)
T 2gli_A           65 EKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPS  144 (155)
T ss_dssp             CCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHH
T ss_pred             CCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHH
Confidence            99999985  9999999999999999999999999998  999999999999999 8999999999988  999999999


Q ss_pred             HHHHHhhhcCC
Q psy4573         276 LVRHHVRSHHS  286 (306)
Q Consensus       276 ~l~~H~~~~h~  286 (306)
                      .|..|+++||+
T Consensus       145 ~L~~H~~~hhg  155 (155)
T 2gli_A          145 SLRKHVKTVHG  155 (155)
T ss_dssp             HHHHHHHHSCC
T ss_pred             HHHHHHHhhcC
Confidence            99999999986

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.93  E-value=1.4e-25  Score=172.74  Aligned_cols=138  Identities=25%  Similarity=0.557  Sum_probs=108.8

Q ss_pred             cccCCCChhhhccHHHHHHHHH---hcccCCccccC-----cchhhccchHHHHHHhhhcCCCCCccccccccccccccc
Q psy4573          99 EYKCNQCDHVAKKLAYLQAHMK---KHRNEYTAYCD-----LCQEGFFRKAKYETHNIQKHNAPPFECESCKKIFTYHKN  170 (306)
Q Consensus        99 ~~~C~~C~~~f~~~~~l~~H~~---~~~~~~~~~C~-----~C~~~~~~~~~l~~H~~~~h~~~~~~c~~c~~~f~~~~~  170 (306)
                      ++.|+.|++.|.+...|..|++   .|.++++|.|+     .|++.|.+...|..|+..++++++               
T Consensus         3 ~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~---------------   67 (155)
T 2gli_A            3 DCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKP---------------   67 (155)
T ss_dssp             BCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCC---------------
T ss_pred             cCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCC---------------
Confidence            3455555555555555555554   34444555544     445888888888888777766654               


Q ss_pred             ccccCcceeccc--cccccCChHHHHHHHhhccCCCCcccCc--CCCccCCcHHHHHHH-HHccCCCCcccCc--ccCcC
Q psy4573         171 TTHLGIKFECEV--CHRKLSTKNHLRLHMRTHTNERPAVCSY--CGKGFRRGDALTEHI-RIHTGQRPYVCEI--CGKGF  243 (306)
Q Consensus       171 ~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~-~~h~~~~~~~C~~--C~~~f  243 (306)
                             |.|+.  |++.|.+...|..|++.|.++++|.|++  |++.|.+...|..|+ ++|.++++|.|++  |++.|
T Consensus        68 -------~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f  140 (155)
T 2gli_A           68 -------HKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRY  140 (155)
T ss_dssp             -------CCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEE
T ss_pred             -------ccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCcccc
Confidence                   55653  8888888999999999999999999998  999999999999998 7899999999988  99999


Q ss_pred             CChhHHHHHHhhccC
Q psy4573         244 TQKQALNTHKRGHTG  258 (306)
Q Consensus       244 ~~~~~L~~H~~~h~~  258 (306)
                      .+...|..|++.|+|
T Consensus       141 ~~~~~L~~H~~~hhg  155 (155)
T 2gli_A          141 TDPSSLRKHVKTVHG  155 (155)
T ss_dssp             SSHHHHHHHHHHSCC
T ss_pred             CCHHHHHHHHHhhcC
Confidence            999999999999875

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.91  E-value=1.4e-24  Score=160.59  Aligned_cols=114  Identities=35%  Similarity=0.725  Sum_probs=108.0

Q ss_pred             CcceeccccccccCChHHHHHHHhhccCCCCcccCcCCCccCCcHHHHHHHHH---ccCCCCcccCcccCcCCChhHHHH
Q psy4573         175 GIKFECEVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGDALTEHIRI---HTGQRPYVCEICGKGFTQKQALNT  251 (306)
Q Consensus       175 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~---h~~~~~~~C~~C~~~f~~~~~L~~  251 (306)
                      ..+|.|+.|++.|.+...|..|++.|.++++|.|.+|++.|.+...|..|+..   +.++++|.|++|++.|.+...|..
T Consensus         5 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~   84 (124)
T 2dlq_A            5 SSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRL   84 (124)
T ss_dssp             CSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHHH
T ss_pred             CCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHHH
Confidence            35899999999999999999999999999999999999999999999999985   578899999999999999999999


Q ss_pred             HHhhccCCCcccCCcchHhhcChHHHHHHhhhcCCCC
Q psy4573         252 HKRGHTGEIPYHCEFCSERFSTKALVRHHVRSHHSSA  288 (306)
Q Consensus       252 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  288 (306)
                      |++.|+++++|.|++|++.|.....|..|++..|++.
T Consensus        85 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~  121 (124)
T 2dlq_A           85 HMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGP  121 (124)
T ss_dssp             HHHHHSSSCSEECSSSCCEESSHHHHHHHHHHTSSCS
T ss_pred             HHHHcCCCCCccCCCccchhCCHHHHHHHHHHHCCCC
Confidence            9999999999999999999999999999999877653

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.91  E-value=3.3e-24  Score=164.94  Aligned_cols=119  Identities=35%  Similarity=0.685  Sum_probs=112.7

Q ss_pred             CcceeccccccccCChHHHHHHHhh-ccCCCC--------cccCcCCCccCCcHHHHHHHHHccCCCCcccCc--ccCcC
Q psy4573         175 GIKFECEVCHRKLSTKNHLRLHMRT-HTNERP--------AVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEI--CGKGF  243 (306)
Q Consensus       175 ~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~--------~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f  243 (306)
                      ..+|.|+.|++.|.+...|..|++. |.++.+        |.|.+|++.|.+...|..|+++|+++++|.|.+  |++.|
T Consensus        23 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f  102 (155)
T 2rpc_A           23 QLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIF  102 (155)
T ss_dssp             CCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEE
T ss_pred             hcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCcc
Confidence            4479999999999999999999998 766554        899999999999999999999999999999998  99999


Q ss_pred             CChhHHHHHHhhccCCCcccCCc--chHhhcChHHHHHHhhhcCCCCCCCcc
Q psy4573         244 TQKQALNTHKRGHTGEIPYHCEF--CSERFSTKALVRHHVRSHHSSARLGLN  293 (306)
Q Consensus       244 ~~~~~L~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~C~  293 (306)
                      .....|..|++.|+++++|.|.+  |++.|.....|..|+++|+++.+|.|+
T Consensus       103 ~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~c~  154 (155)
T 2rpc_A          103 ARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS  154 (155)
T ss_dssp             SCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSCSC
T ss_pred             CCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCCCCCC
Confidence            99999999999999999999997  999999999999999999999999985

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.90  E-value=3.1e-24  Score=157.54  Aligned_cols=110  Identities=36%  Similarity=0.797  Sum_probs=105.8

Q ss_pred             Ccceeccc--cccccCChHHHHHHHhhccCCCCcccC--cCCCccCCcHHHHHHHHHccCCCCcccCcccCcCCChhHHH
Q psy4573         175 GIKFECEV--CHRKLSTKNHLRLHMRTHTNERPAVCS--YCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALN  250 (306)
Q Consensus       175 ~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~  250 (306)
                      ..+|.|+.  |++.|.+...|..|++.|.++++|.|.  .|++.|.+...|..|+++|.++++|.|++|++.|.+...|.
T Consensus         4 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   83 (119)
T 2jp9_A            4 KRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLK   83 (119)
T ss_dssp             SCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHH
T ss_pred             CeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHHHH
Confidence            34799987  999999999999999999999999999  79999999999999999999999999999999999999999


Q ss_pred             HHHhhccCCCcccC--CcchHhhcChHHHHHHhhhc
Q psy4573         251 THKRGHTGEIPYHC--EFCSERFSTKALVRHHVRSH  284 (306)
Q Consensus       251 ~H~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~~  284 (306)
                      .|++.|+++++|.|  +.|++.|.....|..|+++|
T Consensus        84 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           84 THTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             HHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             HHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            99999999999999  89999999999999999876

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.90  E-value=2.7e-24  Score=159.09  Aligned_cols=114  Identities=33%  Similarity=0.729  Sum_probs=104.6

Q ss_pred             cceecc--ccccccCChHHHHHHHhhccCCCCcccCcCCCccCCcHHHHHHHHHccCCCCcccCc--ccCcCCChhHHHH
Q psy4573         176 IKFECE--VCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEI--CGKGFTQKQALNT  251 (306)
Q Consensus       176 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~  251 (306)
                      .+|.|+  .|++.|.+...|..|++.| ++++|.|.+|++.|.+...|..|+++|.++++|.|++  |++.|.....|..
T Consensus         4 ~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~   82 (124)
T 1ubd_C            4 RTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT   82 (124)
T ss_dssp             -CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHH
T ss_pred             CcccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHH
Confidence            479999  8999999999999999999 8899999999999999999999999999999999986  9999999999999


Q ss_pred             HHhhccCCCcccCC--cchHhhcChHHHHHHhhhcCCCCCC
Q psy4573         252 HKRGHTGEIPYHCE--FCSERFSTKALVRHHVRSHHSSARL  290 (306)
Q Consensus       252 H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~h~~~~~  290 (306)
                      |++.|+++++|.|+  .|+++|.+...|..|+++|+++.++
T Consensus        83 H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k~~  123 (124)
T 1ubd_C           83 HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNN  123 (124)
T ss_dssp             HHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC-----
T ss_pred             HHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHHcccccC
Confidence            99999999999996  4999999999999999999988764

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.90  E-value=3.1e-25  Score=165.37  Aligned_cols=97  Identities=31%  Similarity=0.549  Sum_probs=66.2

Q ss_pred             cceeccccccccCChHHHHHHHhhccCCCCcccCcCCCccCCcHHHHHHHHHccCCCCcccCcccCcCCChhHHHHHHhh
Q psy4573         176 IKFECEVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRG  255 (306)
Q Consensus       176 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~  255 (306)
                      .+|.|++|++.|.....|..|+++|.++++|.|.+|++.|.+...|..|+++|++++||.|++||+.|.....|..|++.
T Consensus        21 k~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~  100 (133)
T 2lt7_A           21 VYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQFMSSHIKS  100 (133)
T ss_dssp             EEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHHHHHHHHHH
T ss_pred             cCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCHHHHHHHhHH
Confidence            36777777777777777777777777777777777777777777777777777777777777777777777777777766


Q ss_pred             ccCCC------cccCCcchHhhc
Q psy4573         256 HTGEI------PYHCEFCSERFS  272 (306)
Q Consensus       256 h~~~~------~~~C~~C~~~f~  272 (306)
                      |++++      +|.|..|++.|.
T Consensus       101 hh~~~p~~~~k~~~C~~C~k~~~  123 (133)
T 2lt7_A          101 VHSQDPSGDSKLYRLHPCRSLQI  123 (133)
T ss_dssp             HTCCCTTSSSCCEEECCCCSSCC
T ss_pred             hcCCCCCCCCCCeecCCCCchhh
Confidence            66543      355666665554

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.88  E-value=1.5e-23  Score=156.16  Aligned_cols=107  Identities=23%  Similarity=0.383  Sum_probs=100.0

Q ss_pred             HHhhccCCCCcccCcCCCccCCcHHHHHHHHHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCCcchHhhcChH
Q psy4573         196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTKA  275 (306)
Q Consensus       196 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~  275 (306)
                      |..+|.|+++|.|.+|++.|.....|..|+++|+++++|.|++|++.|.....|..|+++|.++++|.|++|+++|.+..
T Consensus        13 ~~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~   92 (133)
T 2lt7_A           13 YELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQ   92 (133)
T ss_dssp             EEEEETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHH
T ss_pred             ceeecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCHH
Confidence            44568899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhhcCCCC------CCCcccccccchhh
Q psy4573         276 LVRHHVRSHHSSA------RLGLNLLDHELSMI  302 (306)
Q Consensus       276 ~l~~H~~~~h~~~------~~~C~~c~~~~~~~  302 (306)
                      .|..|++++|++.      +|+|..|++.|.+.
T Consensus        93 ~L~~H~~~hh~~~p~~~~k~~~C~~C~k~~~~~  125 (133)
T 2lt7_A           93 FMSSHIKSVHSQDPSGDSKLYRLHPCRSLQIRQ  125 (133)
T ss_dssp             HHHHHHHHHTCCCTTSSSCCEEECCCCSSCCCC
T ss_pred             HHHHHhHHhcCCCCCCCCCCeecCCCCchhhhc
Confidence            9999999999764      48899999887653

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.88  E-value=8.6e-23  Score=157.00  Aligned_cols=127  Identities=28%  Similarity=0.504  Sum_probs=102.3

Q ss_pred             CCccccCcchhhccchHHHHHHhhhcC-CCCCcccccccccccccccccccCcceeccccccccCChHHHHHHHhhccCC
Q psy4573         125 EYTAYCDLCQEGFFRKAKYETHNIQKH-NAPPFECESCKKIFTYHKNTTHLGIKFECEVCHRKLSTKNHLRLHMRTHTNE  203 (306)
Q Consensus       125 ~~~~~C~~C~~~~~~~~~l~~H~~~~h-~~~~~~c~~c~~~f~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  203 (306)
                      ..+|.|+.|++.|.+...|..|+..+| +..+.....              ...|.|+.|++.|.+...|..|+++|.++
T Consensus        23 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~--------------~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   88 (155)
T 2rpc_A           23 QLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHV--------------CYWEECPREGKSFKAKYKLVNHIRVHTGE   88 (155)
T ss_dssp             CCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCC--------------CCBTTCTTSSCCCSSHHHHHHHTHHHHCC
T ss_pred             hcccccccCCcccCCHHHHHHHHHhhcCCCcccCCcc--------------ccccCCCCcccccCCHHHHHHHHHhcCCC
Confidence            344555666666666666666655534 222111111              12478999999999999999999999999


Q ss_pred             CCcccCc--CCCccCCcHHHHHHHHHccCCCCcccCc--ccCcCCChhHHHHHHhhccCCCcccCC
Q psy4573         204 RPAVCSY--CGKGFRRGDALTEHIRIHTGQRPYVCEI--CGKGFTQKQALNTHKRGHTGEIPYHCE  265 (306)
Q Consensus       204 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~C~  265 (306)
                      ++|.|.+  |++.|.....|..|+++|+++++|.|++  |++.|.....|..|+++|+++++|.|.
T Consensus        89 ~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~c~  154 (155)
T 2rpc_A           89 KPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS  154 (155)
T ss_dssp             CSEECSCTTTCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSCSC
T ss_pred             CcccCCcCCCCCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCCCCCC
Confidence            9999998  9999999999999999999999999997  999999999999999999999999985

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.87  E-value=3.4e-22  Score=147.62  Aligned_cols=115  Identities=25%  Similarity=0.482  Sum_probs=108.3

Q ss_pred             hcCCcccccccccccCChHHHHHHhhhcCCCCceecccchhccCChHHHhhhhhh---cccCCcccCCCChhhhccHHHH
Q psy4573          39 EQDGSLACNVCSKRCGSKSGLKIHMKSHTLSKRYACSICLAEFHTLTEKDRHTLS---HVVEGEYKCNQCDHVAKKLAYL  115 (306)
Q Consensus        39 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~~~~~~~l~~H~~~---~~~~~~~~C~~C~~~f~~~~~l  115 (306)
                      .++++|.|+.|++.|.+...|..|++.|.++.+|.|.+|++.|.+...|..|+..   +.+..+|.|++|++.|.....|
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l   82 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMEL   82 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHH
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHH
Confidence            3578899999999999999999999999999999999999999999999999985   5678899999999999999999


Q ss_pred             HHHHHhcccCCccccCcchhhccchHHHHHHhhhcCCC
Q psy4573         116 QAHMKKHRNEYTAYCDLCQEGFFRKAKYETHNIQKHNA  153 (306)
Q Consensus       116 ~~H~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~~h~~  153 (306)
                      ..|++.|+++++|.|+.|++.|.....|..|+...|+.
T Consensus        83 ~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~  120 (124)
T 2dlq_A           83 RLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSG  120 (124)
T ss_dssp             HHHHHHHSSSCSEECSSSCCEESSHHHHHHHHHHTSSC
T ss_pred             HHHHHHcCCCCCccCCCccchhCCHHHHHHHHHHHCCC
Confidence            99999999999999999999999999999999877743

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.87  E-value=4.3e-22  Score=146.03  Aligned_cols=111  Identities=30%  Similarity=0.721  Sum_probs=88.7

Q ss_pred             cCCccccCc--chhhccchHHHHHHhhhcCCCCCcccccccccccccccccccCcceecc--ccccccCChHHHHHHHhh
Q psy4573         124 NEYTAYCDL--CQEGFFRKAKYETHNIQKHNAPPFECESCKKIFTYHKNTTHLGIKFECE--VCHRKLSTKNHLRLHMRT  199 (306)
Q Consensus       124 ~~~~~~C~~--C~~~~~~~~~l~~H~~~~h~~~~~~c~~c~~~f~~~~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~  199 (306)
                      ++++|.|+.  |++.|.+...|..|+..+++++                      +|.|+  .|++.|.+...|..|++.
T Consensus         3 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~----------------------~~~C~~~~C~~~f~~~~~l~~H~~~   60 (119)
T 2jp9_A            3 EKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEK----------------------PYQCDFKDCERRFSRSDQLKRHQRR   60 (119)
T ss_dssp             SSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTC----------------------CEECCSTTCCCEESSHHHHHHHHHH
T ss_pred             CCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCC----------------------CccCCCCCCcCccCCHHHHHHHHHH
Confidence            445666664  6666666666666666555544                      35566  577777888888889888


Q ss_pred             ccCCCCcccCcCCCccCCcHHHHHHHHHccCCCCccc--CcccCcCCChhHHHHHHhhc
Q psy4573         200 HTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVC--EICGKGFTQKQALNTHKRGH  256 (306)
Q Consensus       200 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C--~~C~~~f~~~~~L~~H~~~h  256 (306)
                      |+++++|.|.+|++.|.+...|..|+++|+++++|.|  +.|++.|.+...|..|+++|
T Consensus        61 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           61 HTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             HHCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             cCCCCCccCCccCchhCCHHHHHHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            8888999999999999999999999999999999999  78999999999999998876

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.86  E-value=7.1e-22  Score=145.96  Aligned_cols=116  Identities=22%  Similarity=0.433  Sum_probs=104.1

Q ss_pred             cCCccccc--ccccccCChHHHHHHhhhcCCCCceecccchhccCChHHHhhhhhhcccCCcccCCC--ChhhhccHHHH
Q psy4573          40 QDGSLACN--VCSKRCGSKSGLKIHMKSHTLSKRYACSICLAEFHTLTEKDRHTLSHVVEGEYKCNQ--CDHVAKKLAYL  115 (306)
Q Consensus        40 ~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~C~~--C~~~f~~~~~l  115 (306)
                      ++++|.|+  .|++.|.+...|..|++.| ++.+|.|.+|++.|.+...|..|++.|.+.++|.|.+  |++.|.....|
T Consensus         2 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l   80 (124)
T 1ubd_C            2 EPRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNL   80 (124)
T ss_dssp             ---CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHH
T ss_pred             CCCcccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHH
Confidence            45789999  8999999999999999998 7889999999999999999999999999999999986  99999999999


Q ss_pred             HHHHHhcccCCccccC--cchhhccchHHHHHHhhhcCCCCCc
Q psy4573         116 QAHMKKHRNEYTAYCD--LCQEGFFRKAKYETHNIQKHNAPPF  156 (306)
Q Consensus       116 ~~H~~~~~~~~~~~C~--~C~~~~~~~~~l~~H~~~~h~~~~~  156 (306)
                      ..|++.|+++++|.|+  .|++.|.+...|..|+..+++++++
T Consensus        81 ~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k~~  123 (124)
T 1ubd_C           81 RTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNN  123 (124)
T ss_dssp             HHHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC-----
T ss_pred             HHHHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHHcccccC
Confidence            9999999999999996  5999999999999999998887765

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.81  E-value=9.3e-20  Score=130.66  Aligned_cols=87  Identities=41%  Similarity=0.818  Sum_probs=47.6

Q ss_pred             ceeccccccccCChHHHHHHHhhccCCCCcccCcCCCccCCcHHHHHHHHHccCCCCcccCcccCcCCChhHHHHHHhhc
Q psy4573         177 KFECEVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGH  256 (306)
Q Consensus       177 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h  256 (306)
                      +|.|+.|++.|.....|..|++.|.++++|.|.+|++.|.....|..|+++|.++++|+|.+|++.|.....|..|++.|
T Consensus        17 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H   96 (106)
T 2ee8_A           17 EFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLH   96 (106)
T ss_dssp             CCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHHHHHT
T ss_pred             CeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHHHHHh
Confidence            45555555555555555555555555555555555555555555555555555555555555555555555555555555


Q ss_pred             cCCCccc
Q psy4573         257 TGEIPYH  263 (306)
Q Consensus       257 ~~~~~~~  263 (306)
                      .++++|.
T Consensus        97 ~~~~~~~  103 (106)
T 2ee8_A           97 MQTSSPT  103 (106)
T ss_dssp             TSCCCCC
T ss_pred             CCCCCCc
Confidence            5555443

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.80  E-value=1.4e-19  Score=129.67  Aligned_cols=92  Identities=29%  Similarity=0.674  Sum_probs=88.3

Q ss_pred             cCCCCcccCcCCCccCCcHHHHHHHHHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCCcchHhhcChHHHHHH
Q psy4573         201 TNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTKALVRHH  280 (306)
Q Consensus       201 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H  280 (306)
                      ..+++|.|.+|++.|.....|..|+++|.++++|.|++|++.|.....|..|++.|+++++|.|.+|++.|.....|..|
T Consensus        13 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H   92 (106)
T 2ee8_A           13 KTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVH   92 (106)
T ss_dssp             CCCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHH
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHH
Confidence            45788999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhcCCCCCCCc
Q psy4573         281 VRSHHSSARLGL  292 (306)
Q Consensus       281 ~~~~h~~~~~~C  292 (306)
                      ++.|+++.+|..
T Consensus        93 ~~~H~~~~~~~~  104 (106)
T 2ee8_A           93 KTLHMQTSSPTA  104 (106)
T ss_dssp             HHHTTSCCCCCC
T ss_pred             HHHhCCCCCCcC
Confidence            999999988764

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.80  E-value=6.1e-20  Score=129.14  Aligned_cols=88  Identities=35%  Similarity=0.733  Sum_probs=52.1

Q ss_pred             cCCCCcccCcCCCccCCcHHHHHHHHHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCCcchHhhcChHHHHHH
Q psy4573         201 TNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTKALVRHH  280 (306)
Q Consensus       201 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H  280 (306)
                      .++++|.|.+|++.|.+...|..|+++|.++++|.|++|++.|.....|..|++.|+++++|.|.+|++.|.....|..|
T Consensus         4 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H   83 (96)
T 2dmd_A            4 GSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVH   83 (96)
T ss_dssp             CCCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHHH
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHH
Confidence            34455555555555555555555555555555566666666666666666666656555566666666666666666666


Q ss_pred             hhhcCCCC
Q psy4573         281 VRSHHSSA  288 (306)
Q Consensus       281 ~~~~h~~~  288 (306)
                      +++|+++.
T Consensus        84 ~~~h~~~~   91 (96)
T 2dmd_A           84 LRSHTGDS   91 (96)
T ss_dssp             HTTCCSCC
T ss_pred             HHHhcCCC
Confidence            66655544

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.79  E-value=6e-21  Score=139.04  Aligned_cols=102  Identities=15%  Similarity=0.188  Sum_probs=91.8

Q ss_pred             HHHHHHHhhccCCCCcccCcCCCccCCcHHHHHHHHH--ccCCCCcc-cCcccCcC--CChhHHHHHHhhccCCCcccCC
Q psy4573         191 NHLRLHMRTHTNERPAVCSYCGKGFRRGDALTEHIRI--HTGQRPYV-CEICGKGF--TQKQALNTHKRGHTGEIPYHCE  265 (306)
Q Consensus       191 ~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~--h~~~~~~~-C~~C~~~f--~~~~~L~~H~~~h~~~~~~~C~  265 (306)
                      ..|..|+++|+++++|.|.+|++.|.....|..|+++  |.+.+++. |++|++.|  .....|..|++.|.++++|.|.
T Consensus         5 ~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~   84 (115)
T 2dmi_A            5 SSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCM   84 (115)
T ss_dssp             CCCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBCS
T ss_pred             hhhhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceECC
Confidence            3567789999999999999999999999999999998  77777654 99999999  8999999999999999999999


Q ss_pred             cchHhhcChHHHHHHhhhcCCCCCCCc
Q psy4573         266 FCSERFSTKALVRHHVRSHHSSARLGL  292 (306)
Q Consensus       266 ~C~~~f~~~~~l~~H~~~~h~~~~~~C  292 (306)
                      +|++.|.....|..|++++|.......
T Consensus        85 ~C~k~f~~~~~L~~H~~~hh~~~~~~~  111 (115)
T 2dmi_A           85 YCGHSFESLQDLSVHMIKTKHYQKVSG  111 (115)
T ss_dssp             SSCCBCSSHHHHHHHHHHTTTTTCSCC
T ss_pred             CCCCccCCHHHHHHHHHHhCCcccCCC
Confidence            999999999999999999998765544

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.79  E-value=8.5e-20  Score=124.40  Aligned_cols=80  Identities=41%  Similarity=0.845  Sum_probs=41.2

Q ss_pred             cccCcCCCccCCcHHHHHHHHHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCCcchHhhcChHHHHHHhhhcC
Q psy4573         206 AVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTKALVRHHVRSHH  285 (306)
Q Consensus       206 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h  285 (306)
                      |.|.+|++.|.+...|..|+++|.++++|.|++|++.|.....|..|++.|+++++|.|+.|++.|.+...|..|+++|+
T Consensus         2 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~   81 (82)
T 2kmk_A            2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKHT   81 (82)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHHHC
T ss_pred             ccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHhhC
Confidence            44555555555555555555555445555555555555555555555555555555555555555555555555555544

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.79  E-value=3.2e-19  Score=125.42  Aligned_cols=88  Identities=35%  Similarity=0.693  Sum_probs=84.3

Q ss_pred             CcceeccccccccCChHHHHHHHhhccCCCCcccCcCCCccCCcHHHHHHHHHccCCCCcccCcccCcCCChhHHHHHHh
Q psy4573         175 GIKFECEVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKR  254 (306)
Q Consensus       175 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~  254 (306)
                      ..+|.|+.|++.|.+...|..|++.|.++++|.|.+|++.|.....|..|+++|.++++|.|++|++.|.....|..|++
T Consensus         6 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   85 (96)
T 2dmd_A            6 SGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLR   85 (96)
T ss_dssp             CCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHHHHT
T ss_pred             CcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHH
Confidence            45899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hccCCCcc
Q psy4573         255 GHTGEIPY  262 (306)
Q Consensus       255 ~h~~~~~~  262 (306)
                      .|+++++.
T Consensus        86 ~h~~~~~p   93 (96)
T 2dmd_A           86 SHTGDSGP   93 (96)
T ss_dssp             TCCSCCCC
T ss_pred             HhcCCCCC
Confidence            99998754

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.79  E-value=1e-19  Score=126.36  Aligned_cols=84  Identities=40%  Similarity=0.905  Sum_probs=44.2

Q ss_pred             CCcccC--cCCCccCCcHHHHHHHHHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCCcchHhhcChHHHHHHh
Q psy4573         204 RPAVCS--YCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTKALVRHHV  281 (306)
Q Consensus       204 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~  281 (306)
                      ++|.|+  .|++.|.....|..|+++|.++++|.|++|++.|.+...|..|++.|+++++|.|++|++.|.....|..|+
T Consensus         3 k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~   82 (90)
T 1a1h_A            3 RPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHT   82 (90)
T ss_dssp             CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHH
T ss_pred             CceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHHHH
Confidence            445554  355555555555555555555555555555555555555555555555555555555555555555555555


Q ss_pred             hhcCCC
Q psy4573         282 RSHHSS  287 (306)
Q Consensus       282 ~~~h~~  287 (306)
                      ++|+++
T Consensus        83 ~~H~~~   88 (90)
T 1a1h_A           83 KIHLRQ   88 (90)
T ss_dssp             GGGGC-
T ss_pred             HHhccc
Confidence            555443

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.78  E-value=1.9e-19  Score=122.64  Aligned_cols=82  Identities=40%  Similarity=0.921  Sum_probs=79.1

Q ss_pred             ceeccccccccCChHHHHHHHhhccCCCCcccCcCCCccCCcHHHHHHHHHccCCCCcccCcccCcCCChhHHHHHHhhc
Q psy4573         177 KFECEVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGH  256 (306)
Q Consensus       177 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h  256 (306)
                      +|.|+.|++.|.+...|..|++.|.++++|.|..|++.|.....|..|+++|+++++|.|++|++.|.+...|..|++.|
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   80 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKH   80 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHhh
Confidence            58999999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             cC
Q psy4573         257 TG  258 (306)
Q Consensus       257 ~~  258 (306)
                      +|
T Consensus        81 ~g   82 (82)
T 2kmk_A           81 TG   82 (82)
T ss_dssp             C-
T ss_pred             CC
Confidence            75

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.78  E-value=5.4e-19  Score=123.99  Aligned_cols=84  Identities=35%  Similarity=0.757  Sum_probs=56.0

Q ss_pred             CCCCcccCcCCCccCCcHHHHHHHHHccCCCCcccCcccCcCCChhHHHHHHhhccCC--CcccCCcchHhhcChHHHHH
Q psy4573         202 NERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGE--IPYHCEFCSERFSTKALVRH  279 (306)
Q Consensus       202 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~--~~~~C~~C~~~f~~~~~l~~  279 (306)
                      ++++|.|.+|++.|.+...|..|+++|.++++|.|++|++.|.....|..|++.|+++  ++|.|.+|++.|.+...|..
T Consensus         4 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~~   83 (95)
T 2yt9_A            4 GSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNG   83 (95)
T ss_dssp             CCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHHH
T ss_pred             CCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHHH
Confidence            4566666666666666666666666666666666666666666666666666666665  66667777777777777777


Q ss_pred             HhhhcC
Q psy4573         280 HVRSHH  285 (306)
Q Consensus       280 H~~~~h  285 (306)
                      |++..|
T Consensus        84 H~~~~H   89 (95)
T 2yt9_A           84 HIKQVH   89 (95)
T ss_dssp             HHHHTS
T ss_pred             HHHHhc
Confidence            765433

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.78  E-value=1.5e-19  Score=129.77  Aligned_cols=94  Identities=16%  Similarity=0.249  Sum_probs=73.2

Q ss_pred             HhhccCCCCcccCcCCCccCCcHHHHHHHHHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCCcchHhhcChHH
Q psy4573         197 MRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTKAL  276 (306)
Q Consensus       197 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~  276 (306)
                      ++.|.++++|.|.+|++.|.....|..|+++|.  ++|.|++|++.|.....|..|+. |.++++|.|.+|++.|.....
T Consensus         8 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~--~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~~   84 (107)
T 1wjp_A            8 ASPVENKEVYQCRLCNAKLSSLLEQGSHERLCR--NAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSFS   84 (107)
T ss_dssp             CCCCCCCCCCBCTTTCCBCSSHHHHHHHHHHHH--HSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHHH
T ss_pred             CcccCCCcCeECCCCCCccCCHHHHHHHHHHCC--CCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCHHH
Confidence            455677778888888888888888888887773  57888888888888888888885 888888888888888888888


Q ss_pred             HHHHhh-hcCCCCCCCcc
Q psy4573         277 VRHHVR-SHHSSARLGLN  293 (306)
Q Consensus       277 l~~H~~-~~h~~~~~~C~  293 (306)
                      |..|++ .|.++.+|.++
T Consensus        85 L~~H~~~~H~~~~~~~~~  102 (107)
T 1wjp_A           85 IWRHQVEVHNQNNMAPTS  102 (107)
T ss_dssp             HHHHHHHTSCCCCCCCCC
T ss_pred             HHHHHHHHcCCCCCCCCC
Confidence            888886 66666767653

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.77  E-value=6e-19  Score=122.43  Aligned_cols=85  Identities=36%  Similarity=0.829  Sum_probs=80.5

Q ss_pred             cceecc--ccccccCChHHHHHHHhhccCCCCcccCcCCCccCCcHHHHHHHHHccCCCCcccCcccCcCCChhHHHHHH
Q psy4573         176 IKFECE--VCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHK  253 (306)
Q Consensus       176 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~  253 (306)
                      .+|.|+  .|++.|.....|..|++.|.++++|.|..|++.|.+...|..|+++|+++++|.|++|++.|.....|..|+
T Consensus         3 k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~   82 (90)
T 1a1h_A            3 RPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHT   82 (90)
T ss_dssp             CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHH
T ss_pred             CceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHHHH
Confidence            479998  699999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhccCCC
Q psy4573         254 RGHTGEI  260 (306)
Q Consensus       254 ~~h~~~~  260 (306)
                      ++|++++
T Consensus        83 ~~H~~~k   89 (90)
T 1a1h_A           83 KIHLRQK   89 (90)
T ss_dssp             GGGGC--
T ss_pred             HHhcccC
Confidence            9999875

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.77  E-value=4.1e-19  Score=128.19  Aligned_cols=88  Identities=36%  Similarity=0.736  Sum_probs=70.0

Q ss_pred             hccCCCCcccCcCCCccCCcHHHHHHHHHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCCcchHhhcChHHHH
Q psy4573         199 THTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTKALVR  278 (306)
Q Consensus       199 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~  278 (306)
                      .|.++++|.| .|++.|.+...|..|+++|.++++|.|++|++.|.....|..|++.|+++++|.|.+|++.|.....|.
T Consensus         4 ~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   82 (110)
T 2csh_A            4 GSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFH   82 (110)
T ss_dssp             CCCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHH
T ss_pred             CCCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHH
Confidence            3667777888 788888888888888888887788888888888888888888888888888888888888888888888


Q ss_pred             HHhhhcCCC
Q psy4573         279 HHVRSHHSS  287 (306)
Q Consensus       279 ~H~~~~h~~  287 (306)
                      .|++.+++.
T Consensus        83 ~H~~~~~~~   91 (110)
T 2csh_A           83 RHVTSCTKS   91 (110)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHcccc
Confidence            888777653

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.74  E-value=6.4e-18  Score=118.45  Aligned_cols=85  Identities=38%  Similarity=0.858  Sum_probs=79.8

Q ss_pred             CcceeccccccccCChHHHHHHHhhccCCCCcccCcCCCccCCcHHHHHHHHHccCC--CCcccCcccCcCCChhHHHHH
Q psy4573         175 GIKFECEVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQ--RPYVCEICGKGFTQKQALNTH  252 (306)
Q Consensus       175 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~--~~~~C~~C~~~f~~~~~L~~H  252 (306)
                      ..+|.|+.|++.|.+...|..|++.|.++++|.|.+|++.|.....|..|+++|+++  ++|.|++|++.|.....|..|
T Consensus         5 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~~H   84 (95)
T 2yt9_A            5 SSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGH   84 (95)
T ss_dssp             CSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHHHH
T ss_pred             CCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHHHH
Confidence            458999999999999999999999999999999999999999999999999999987  899999999999999999999


Q ss_pred             Hh-hccCC
Q psy4573         253 KR-GHTGE  259 (306)
Q Consensus       253 ~~-~h~~~  259 (306)
                      ++ .|.++
T Consensus        85 ~~~~H~~~   92 (95)
T 2yt9_A           85 IKQVHSGP   92 (95)
T ss_dssp             HHHTSCCC
T ss_pred             HHHhcCCC
Confidence            96 66554

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.73  E-value=4.4e-18  Score=122.10  Aligned_cols=88  Identities=23%  Similarity=0.371  Sum_probs=82.6

Q ss_pred             CcceeccccccccCChHHHHHHHhhccCCCCcccCcCCCccCCcHHHHHHHHHccCCCCcccCcccCcCCChhHHHHHHh
Q psy4573         175 GIKFECEVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKR  254 (306)
Q Consensus       175 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~  254 (306)
                      ..+|.|+.|++.|.....|..|++.|.  ++|.|.+|++.|.....|..|+. |.++++|.|++|++.|.....|..|++
T Consensus        14 ~~~~~C~~C~~~f~~~~~l~~H~~~H~--~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~~L~~H~~   90 (107)
T 1wjp_A           14 KEVYQCRLCNAKLSSLLEQGSHERLCR--NAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSFSIWRHQV   90 (107)
T ss_dssp             CCCCBCTTTCCBCSSHHHHHHHHHHHH--HSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHHHHHHHHH
T ss_pred             CcCeECCCCCCccCCHHHHHHHHHHCC--CCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCHHHHHHHHH
Confidence            348999999999999999999999984  78999999999999999999995 999999999999999999999999997


Q ss_pred             -hccCCCcccCC
Q psy4573         255 -GHTGEIPYHCE  265 (306)
Q Consensus       255 -~h~~~~~~~C~  265 (306)
                       .|.++++|.|.
T Consensus        91 ~~H~~~~~~~~~  102 (107)
T 1wjp_A           91 EVHNQNNMAPTS  102 (107)
T ss_dssp             HTSCCCCCCCCC
T ss_pred             HHcCCCCCCCCC
Confidence             89999999875

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.71  E-value=1.4e-17  Score=120.05  Aligned_cols=83  Identities=34%  Similarity=0.714  Sum_probs=79.6

Q ss_pred             CcceeccccccccCChHHHHHHHhhccCCCCcccCcCCCccCCcHHHHHHHHHccCCCCcccCcccCcCCChhHHHHHHh
Q psy4573         175 GIKFECEVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKR  254 (306)
Q Consensus       175 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~  254 (306)
                      ..+|.| .|++.|.....|..|++.|.++++|.|.+|++.|.....|..|+++|.++++|.|++|++.|.....|..|++
T Consensus         8 ~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   86 (110)
T 2csh_A            8 DKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFHRHVT   86 (110)
T ss_dssp             CCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHHHHHH
Confidence            348999 8999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hccC
Q psy4573         255 GHTG  258 (306)
Q Consensus       255 ~h~~  258 (306)
                      .|+.
T Consensus        87 ~~~~   90 (110)
T 2csh_A           87 SCTK   90 (110)
T ss_dssp             HHHH
T ss_pred             Hccc
Confidence            8865

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.71  E-value=1.3e-18  Score=120.24  Aligned_cols=83  Identities=30%  Similarity=0.617  Sum_probs=72.6

Q ss_pred             CCCcccCcCCCccCCcHHHHHHHHHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCCcchHhhcChHHHHHHhh
Q psy4573         203 ERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTKALVRHHVR  282 (306)
Q Consensus       203 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  282 (306)
                      ++||.|.+|++.|.....|..|+++|.++++|.|++|++.|.....|..|++.|++ .+|.|..|++.|.....|..|++
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~f~~~~~L~~H~~   79 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI-LPILEDKVEELLSKNYHLENEVA   79 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC-CcchHHHHHHHHHHHhhhHHHHH
Confidence            46888888999998888899998888888899999999999999999999888875 67899999999999999999998


Q ss_pred             hcCC
Q psy4573         283 SHHS  286 (306)
Q Consensus       283 ~~h~  286 (306)
                      ..|+
T Consensus        80 ~~h~   83 (88)
T 1llm_C           80 RLKK   83 (88)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8765

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.70  E-value=5e-17  Score=114.95  Aligned_cols=82  Identities=37%  Similarity=0.799  Sum_probs=61.1

Q ss_pred             cceeccc--cccccCChHHHHHHHhhccCCCCcccC--cCCCccCCcHHHHHHHHHccCCCCcccCcccCcCCChhHHHH
Q psy4573         176 IKFECEV--CHRKLSTKNHLRLHMRTHTNERPAVCS--YCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNT  251 (306)
Q Consensus       176 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~  251 (306)
                      .+|.|..  |++.|.....|..|++.|.++++|.|.  .|++.|.....|..|+++|+++++|.|++|++.|.....|..
T Consensus        14 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   93 (100)
T 2ebt_A           14 RIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLAL   93 (100)
T ss_dssp             CCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHHHH
T ss_pred             cceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHHHH
Confidence            3677775  777777777777777777777777775  477777777777777777777777777777777777777777


Q ss_pred             HHhhcc
Q psy4573         252 HKRGHT  257 (306)
Q Consensus       252 H~~~h~  257 (306)
                      |+++|.
T Consensus        94 H~~~H~   99 (100)
T 2ebt_A           94 HMKRHQ   99 (100)
T ss_dssp             HHHHHC
T ss_pred             HHHHhC
Confidence            777665

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.70  E-value=2.2e-17  Score=116.80  Aligned_cols=85  Identities=34%  Similarity=0.784  Sum_probs=80.9

Q ss_pred             CCCCcccCc--CCCccCCcHHHHHHHHHccCCCCcccC--cccCcCCChhHHHHHHhhccCCCcccCCcchHhhcChHHH
Q psy4573         202 NERPAVCSY--CGKGFRRGDALTEHIRIHTGQRPYVCE--ICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTKALV  277 (306)
Q Consensus       202 ~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l  277 (306)
                      ..++|.|..  |++.|.....|..|+++|.++++|.|+  .|++.|.....|..|++.|+++++|.|.+|++.|.....|
T Consensus        12 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   91 (100)
T 2ebt_A           12 KRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHL   91 (100)
T ss_dssp             SCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHH
T ss_pred             cCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHH
Confidence            467899997  999999999999999999999999996  6999999999999999999999999999999999999999


Q ss_pred             HHHhhhcCC
Q psy4573         278 RHHVRSHHS  286 (306)
Q Consensus       278 ~~H~~~~h~  286 (306)
                      ..|+++|++
T Consensus        92 ~~H~~~H~~  100 (100)
T 2ebt_A           92 ALHMKRHQN  100 (100)
T ss_dssp             HHHHHHHCC
T ss_pred             HHHHHHhCC
Confidence            999999874

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.70  E-value=2.9e-17  Score=113.57  Aligned_cols=80  Identities=40%  Similarity=0.875  Sum_probs=51.5

Q ss_pred             ceeccc--cccccCChHHHHHHHhhccCCCCcccC--cCCCccCCcHHHHHHHHHccCCCCcccCcccCcCCChhHHHHH
Q psy4573         177 KFECEV--CHRKLSTKNHLRLHMRTHTNERPAVCS--YCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTH  252 (306)
Q Consensus       177 ~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H  252 (306)
                      +|.|+.  |++.|.....|..|++.|.++++|.|+  .|++.|.+...|..|+++|.++++|.|++|++.|.....|..|
T Consensus         5 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H   84 (89)
T 2wbs_A            5 THTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALH   84 (89)
T ss_dssp             CEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHH
T ss_pred             CeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHHHH
Confidence            466666  666666666666666666666666665  3666666666666666666666666666666666666666666


Q ss_pred             Hhhc
Q psy4573         253 KRGH  256 (306)
Q Consensus       253 ~~~h  256 (306)
                      ++.|
T Consensus        85 ~~~H   88 (89)
T 2wbs_A           85 MKRH   88 (89)
T ss_dssp             GGGG
T ss_pred             HHhh
Confidence            6655

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.70  E-value=8.6e-18  Score=122.17  Aligned_cols=91  Identities=23%  Similarity=0.304  Sum_probs=81.4

Q ss_pred             CcceeccccccccCChHHHHHHHhh--ccCCCCcc-cCcCCCcc--CCcHHHHHHHHHccCCCCcccCcccCcCCChhHH
Q psy4573         175 GIKFECEVCHRKLSTKNHLRLHMRT--HTNERPAV-CSYCGKGF--RRGDALTEHIRIHTGQRPYVCEICGKGFTQKQAL  249 (306)
Q Consensus       175 ~~~~~C~~C~~~f~~~~~l~~H~~~--h~~~~~~~-C~~C~~~f--~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L  249 (306)
                      ..+|.|+.|++.|.....|..|++.  |.+.+++. |.+|++.|  .....|..|+++|.++++|.|++|++.|.....|
T Consensus        17 ~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L   96 (115)
T 2dmi_A           17 ASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDL   96 (115)
T ss_dssp             CCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBCSSSCCBCSSHHHH
T ss_pred             CCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceECCCCCCccCCHHHH
Confidence            3478899999999999999999998  77777655 99999999  8999999999999999999999999999999999


Q ss_pred             HHHHhhccCCCcccCC
Q psy4573         250 NTHKRGHTGEIPYHCE  265 (306)
Q Consensus       250 ~~H~~~h~~~~~~~C~  265 (306)
                      ..|++.|+.......+
T Consensus        97 ~~H~~~hh~~~~~~~~  112 (115)
T 2dmi_A           97 SVHMIKTKHYQKVSGP  112 (115)
T ss_dssp             HHHHHHTTTTTCSCCC
T ss_pred             HHHHHHhCCcccCCCC
Confidence            9999998887665544

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.70  E-value=1.7e-17  Score=114.80  Aligned_cols=83  Identities=36%  Similarity=0.852  Sum_probs=79.3

Q ss_pred             CCCcccCc--CCCccCCcHHHHHHHHHccCCCCcccC--cccCcCCChhHHHHHHhhccCCCcccCCcchHhhcChHHHH
Q psy4573         203 ERPAVCSY--CGKGFRRGDALTEHIRIHTGQRPYVCE--ICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTKALVR  278 (306)
Q Consensus       203 ~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~  278 (306)
                      ..+|.|..  |++.|.+...|..|+++|.++++|.|+  .|++.|.....|..|++.|.++++|.|+.|++.|.....|.
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   82 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLA   82 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHH
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHH
Confidence            46799999  999999999999999999999999997  69999999999999999999999999999999999999999


Q ss_pred             HHhhhcC
Q psy4573         279 HHVRSHH  285 (306)
Q Consensus       279 ~H~~~~h  285 (306)
                      .|+++|.
T Consensus        83 ~H~~~H~   89 (89)
T 2wbs_A           83 LHMKRHF   89 (89)
T ss_dssp             HHGGGGC
T ss_pred             HHHHhhC
Confidence            9999873

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.69  E-value=1.7e-17  Score=104.77  Aligned_cols=57  Identities=40%  Similarity=0.866  Sum_probs=29.9

Q ss_pred             CCCcccCcCCCccCCcHHHHHHHHHccCCCCcccCcccCcCCChhHHHHHHhhccCC
Q psy4573         203 ERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGE  259 (306)
Q Consensus       203 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~  259 (306)
                      |+||.|.+|++.|...+.|..|+++|++++||.|++||+.|...+.|..|+++|.++
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htge   58 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNK   58 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCC
Confidence            345555555555555555555555555555555555555555555555555555444

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.69  E-value=1.5e-17  Score=105.04  Aligned_cols=58  Identities=31%  Similarity=0.783  Sum_probs=55.6

Q ss_pred             CCCcccCcccCcCCChhHHHHHHhhccCCCcccCCcchHhhcChHHHHHHhhhcCCCC
Q psy4573         231 QRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTKALVRHHVRSHHSSA  288 (306)
Q Consensus       231 ~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  288 (306)
                      |+||+|.+||+.|...+.|..|+++|.++++|.|.+|+++|...+.|..|+++|+++.
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            7899999999999999999999999999999999999999999999999999998764

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.66  E-value=6.6e-17  Score=110.66  Aligned_cols=77  Identities=39%  Similarity=0.673  Sum_probs=41.6

Q ss_pred             ccc--CcCCCccCCcHHHHHHHHHccCCCCcccCc--ccCcCCChhHHHHHHhhccCCCcccCCc---chHhhcChHHHH
Q psy4573         206 AVC--SYCGKGFRRGDALTEHIRIHTGQRPYVCEI--CGKGFTQKQALNTHKRGHTGEIPYHCEF---CSERFSTKALVR  278 (306)
Q Consensus       206 ~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~C~~---C~~~f~~~~~l~  278 (306)
                      |.|  ..|++.|.+...|..|+++|.++++|.|++  |++.|.....|..|++.|++   |.|..   |++.|.....|.
T Consensus         2 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~l~   78 (85)
T 2j7j_A            2 YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLYL   78 (85)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHHHHH
T ss_pred             ccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHHHHH
Confidence            445  445555555555555555555555555544  55555555555555555555   55555   555555555555


Q ss_pred             HHhhhcC
Q psy4573         279 HHVRSHH  285 (306)
Q Consensus       279 ~H~~~~h  285 (306)
                      .|+++||
T Consensus        79 ~H~~~hh   85 (85)
T 2j7j_A           79 KHVAECH   85 (85)
T ss_dssp             HHHHHCC
T ss_pred             HHHHhcC
Confidence            5555543

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.64  E-value=2.3e-16  Score=107.90  Aligned_cols=78  Identities=27%  Similarity=0.525  Sum_probs=74.9

Q ss_pred             ceec--cccccccCChHHHHHHHhhccCCCCcccCc--CCCccCCcHHHHHHHHHccCCCCcccCc---ccCcCCChhHH
Q psy4573         177 KFEC--EVCHRKLSTKNHLRLHMRTHTNERPAVCSY--CGKGFRRGDALTEHIRIHTGQRPYVCEI---CGKGFTQKQAL  249 (306)
Q Consensus       177 ~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~---C~~~f~~~~~L  249 (306)
                      ||.|  +.|++.|.....|..|+++|.++++|.|+.  |++.|.+...|..|+++|++   |.|++   |++.|.....|
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~l   77 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLY   77 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHHHH
Confidence            5899  899999999999999999999999999988  99999999999999999998   99999   99999999999


Q ss_pred             HHHHhhcc
Q psy4573         250 NTHKRGHT  257 (306)
Q Consensus       250 ~~H~~~h~  257 (306)
                      ..|++.|+
T Consensus        78 ~~H~~~hh   85 (85)
T 2j7j_A           78 LKHVAECH   85 (85)
T ss_dssp             HHHHHHCC
T ss_pred             HHHHHhcC
Confidence            99999875

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.64  E-value=1.9e-17  Score=114.33  Aligned_cols=82  Identities=29%  Similarity=0.570  Sum_probs=77.4

Q ss_pred             cceeccccccccCChHHHHHHHhhccCCCCcccCcCCCccCCcHHHHHHHHHccCCCCcccCcccCcCCChhHHHHHHhh
Q psy4573         176 IKFECEVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRG  255 (306)
Q Consensus       176 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~  255 (306)
                      .+|.|+.|++.|.....|..|+++|.++++|.|..|++.|.....|..|+++|++ .+|.|+.|++.|.....|..|++.
T Consensus         2 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~f~~~~~L~~H~~~   80 (88)
T 1llm_C            2 KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI-LPILEDKVEELLSKNYHLENEVAR   80 (88)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC-CcchHHHHHHHHHHHhhhHHHHHH
Confidence            4799999999999999999999999999999999999999999999999999885 789999999999999999999987


Q ss_pred             ccC
Q psy4573         256 HTG  258 (306)
Q Consensus       256 h~~  258 (306)
                      +++
T Consensus        81 ~h~   83 (88)
T 1llm_C           81 LKK   83 (88)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            654

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.62  E-value=9.9e-17  Score=110.08  Aligned_cols=76  Identities=25%  Similarity=0.482  Sum_probs=42.9

Q ss_pred             HHHHHccCCCCcccCcccCcCCChhHHHHHHhhccCC----CcccCCcchHhhcChHHHHHHhhhcCCCCCCCccccccc
Q psy4573         223 EHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGE----IPYHCEFCSERFSTKALVRHHVRSHHSSARLGLNLLDHE  298 (306)
Q Consensus       223 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~----~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~c~~~  298 (306)
                      +|+++|.++++|.|.+|++.|.....|..|++.|+..    ++|.|.+|++.|.....|..|+++|+++.++.|..|+..
T Consensus         5 ~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~   84 (86)
T 1x6h_A            5 SSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSGPS   84 (86)
T ss_dssp             CCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCCCCC
T ss_pred             cccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCCCCCC
Confidence            3555555555555555555555555555555544443    455565566666555566666655655555555555544

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.62  E-value=1.3e-16  Score=109.41  Aligned_cols=79  Identities=30%  Similarity=0.501  Sum_probs=71.0

Q ss_pred             HHHHHhhccCCCCcccCcCCCccCCcHHHHHHHHHccCC----CCcccCcccCcCCChhHHHHHHhhccCCCcccCCcch
Q psy4573         193 LRLHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQ----RPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCS  268 (306)
Q Consensus       193 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~----~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~  268 (306)
                      |.+|+++|.++++|.|.+|++.|.....|..|+++++..    ++|.|++|++.|.....|..|++.|++++++.|..|+
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~   82 (86)
T 1x6h_A            3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSG   82 (86)
T ss_dssp             TTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCCC
T ss_pred             cccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCCCC
Confidence            456888999999999999999999999999999887665    7899999999999999999999999999999999998


Q ss_pred             Hhh
Q psy4573         269 ERF  271 (306)
Q Consensus       269 ~~f  271 (306)
                      .+|
T Consensus        83 ~~~   85 (86)
T 1x6h_A           83 PSS   85 (86)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            765

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.61  E-value=4.5e-16  Score=104.98  Aligned_cols=61  Identities=33%  Similarity=0.657  Sum_probs=25.9

Q ss_pred             CCCccCCcHHHHHHHH-HccCCCCcccCc--ccCcCCChhHHHHHHhhccCCCcccCCcchHhh
Q psy4573         211 CGKGFRRGDALTEHIR-IHTGQRPYVCEI--CGKGFTQKQALNTHKRGHTGEIPYHCEFCSERF  271 (306)
Q Consensus       211 C~~~f~~~~~l~~H~~-~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f  271 (306)
                      |++.|.+...|..|++ +|.++++|.|++  |++.|.....|..|+++|+++++|.|.+|+++|
T Consensus        15 C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F   78 (79)
T 2dlk_A           15 CGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS   78 (79)
T ss_dssp             TCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCC
T ss_pred             CcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCC
Confidence            4444444444444443 344444444443  444444444444444444444444444444433

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.60  E-value=2.4e-16  Score=111.01  Aligned_cols=77  Identities=19%  Similarity=0.277  Sum_probs=54.5

Q ss_pred             cCCcHHHHHHHHHccCCCCcccCcccCcCC-ChhHHHHHHhhccC-CCcccCCcchHhhcChHHHHHHhhhcCCCCCCC
Q psy4573         215 FRRGDALTEHIRIHTGQRPYVCEICGKGFT-QKQALNTHKRGHTG-EIPYHCEFCSERFSTKALVRHHVRSHHSSARLG  291 (306)
Q Consensus       215 f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~-~~~~L~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  291 (306)
                      +.....+..|+++|.++++|.|++|++.|. ....|..|++.|++ +++|.|.+|++.|.....|..|+++||++.+..
T Consensus         6 ~~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~~   84 (98)
T 2gqj_A            6 SGPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPSD   84 (98)
T ss_dssp             CCCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSSC
T ss_pred             CCCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCCCC
Confidence            344455566777777777777777777777 77777777777776 777777777777777777777777777766644

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.59  E-value=9.7e-16  Score=103.32  Aligned_cols=71  Identities=24%  Similarity=0.537  Sum_probs=67.8

Q ss_pred             cCCCCcccCc--ccCcCCChhHHHHHHh-hccCCCcccCCc--chHhhcChHHHHHHhhhcCCCCCCCcccccccc
Q psy4573         229 TGQRPYVCEI--CGKGFTQKQALNTHKR-GHTGEIPYHCEF--CSERFSTKALVRHHVRSHHSSARLGLNLLDHEL  299 (306)
Q Consensus       229 ~~~~~~~C~~--C~~~f~~~~~L~~H~~-~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~C~~c~~~~  299 (306)
                      +++++|.|..  |++.|.+...|..|++ .|.++++|.|++  |++.|.....|..|+++|+++.+|.|.+|++.|
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F   78 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS   78 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCC
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCC
Confidence            5678999987  9999999999999999 799999999999  999999999999999999999999999999987

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.58  E-value=2.1e-15  Score=101.15  Aligned_cols=63  Identities=37%  Similarity=0.745  Sum_probs=32.3

Q ss_pred             CCCCcccCcccCcCCChhHHHHHHhhccCCCcccCCcchHhhcChHHHHHHhhhcCCCCCCCc
Q psy4573         230 GQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTKALVRHHVRSHHSSARLGL  292 (306)
Q Consensus       230 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C  292 (306)
                      ++++|.|++|++.|.....|..|++.|.++++|.|.+|++.|.....|..|+++|+++.+|.|
T Consensus        15 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           15 ERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            344455555555555555555555555555555555555555555555555555555554444

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.58  E-value=2.6e-15  Score=100.72  Aligned_cols=65  Identities=42%  Similarity=0.798  Sum_probs=45.5

Q ss_pred             ccCCCCcccCcCCCccCCcHHHHHHHHHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccC
Q psy4573         200 HTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHC  264 (306)
Q Consensus       200 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C  264 (306)
                      +.++++|.|.+|++.|.....|..|+++|.++++|.|++|++.|.....|..|+++|+++++|.|
T Consensus        13 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           13 QRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            34556677777777777777777777777777777777777777777777777777777777665

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.55  E-value=1e-15  Score=107.68  Aligned_cols=78  Identities=23%  Similarity=0.334  Sum_probs=71.2

Q ss_pred             cCChHHHHHHHhhccCCCCcccCcCCCccC-CcHHHHHHHHHccC-CCCcccCcccCcCCChhHHHHHHhhccCCCcccC
Q psy4573         187 LSTKNHLRLHMRTHTNERPAVCSYCGKGFR-RGDALTEHIRIHTG-QRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHC  264 (306)
Q Consensus       187 f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~-~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C  264 (306)
                      +.....+..|+++|.++++|.|.+|++.|. ....|..|+++|++ +++|.|.+|++.|.....|..|++.|++++++.-
T Consensus         6 ~~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~~~   85 (98)
T 2gqj_A            6 SGPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPSDA   85 (98)
T ss_dssp             CCCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSSCC
T ss_pred             CCCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCCCCC
Confidence            344556778999999999999999999999 99999999999998 9999999999999999999999999999988543

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.55  E-value=7.5e-15  Score=102.62  Aligned_cols=72  Identities=15%  Similarity=0.279  Sum_probs=39.0

Q ss_pred             cCChHHHHHHHhhccCCCCcccCcCCCcc-CCcHHHHHHHHHccCCCCcccCcccCcCCChhHHHHH-HhhccCC
Q psy4573         187 LSTKNHLRLHMRTHTNERPAVCSYCGKGF-RRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTH-KRGHTGE  259 (306)
Q Consensus       187 f~~~~~l~~H~~~h~~~~~~~C~~C~~~f-~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H-~~~h~~~  259 (306)
                      |.....|..|++.+.++++|.|..|++.| .....|..|+++| ++++|.|.+|++.|.....|..| ++.|.++
T Consensus        16 ~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~   89 (96)
T 2ctd_A           16 YAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSL   89 (96)
T ss_dssp             SCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCC
T ss_pred             CCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCCC
Confidence            34444455555555555555555555555 5555555555555 55555555555555555555555 4444443

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.55  E-value=5.5e-15  Score=103.32  Aligned_cols=80  Identities=14%  Similarity=0.209  Sum_probs=71.5

Q ss_pred             CCccCCcHHHHHHHHHccCCCCcccCcccCcC-CChhHHHHHHhhccCCCcccCCcchHhhcChHHHHHH-hhhcCCCCC
Q psy4573         212 GKGFRRGDALTEHIRIHTGQRPYVCEICGKGF-TQKQALNTHKRGHTGEIPYHCEFCSERFSTKALVRHH-VRSHHSSAR  289 (306)
Q Consensus       212 ~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f-~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H-~~~~h~~~~  289 (306)
                      ...|.....|..|.+++.++++|.|++|++.| .....|..|++.| ++++|.|.+|++.|.....|..| +++|.+...
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~p~   91 (96)
T 2ctd_A           13 PPVYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSLPS   91 (96)
T ss_dssp             CCSSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCCSS
T ss_pred             CCCCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCCCCC
Confidence            45677888899999999999999999999999 9999999999999 99999999999999999999999 777765544


Q ss_pred             CCc
Q psy4573         290 LGL  292 (306)
Q Consensus       290 ~~C  292 (306)
                      +.+
T Consensus        92 ~~~   94 (96)
T 2ctd_A           92 GPS   94 (96)
T ss_dssp             CSC
T ss_pred             CCC
Confidence            443

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.52  E-value=1.4e-14  Score=96.21  Aligned_cols=60  Identities=42%  Similarity=0.897  Sum_probs=28.2

Q ss_pred             CCCCcccCcCCCccCCcHHHHHHHHHccCCCCcccCcccCcCCChhHHHHHHhhccCCCc
Q psy4573         202 NERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIP  261 (306)
Q Consensus       202 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~  261 (306)
                      ++++|.|..|++.|.....|..|+++|.++++|.|.+|++.|.....|..|++.|+++++
T Consensus        14 ~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp   73 (74)
T 2lce_A           14 SDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKP   73 (74)
T ss_dssp             CCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCC
T ss_pred             CCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCC
Confidence            344444444444444444444444444444444444444444444444444444444443

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.52  E-value=1.2e-14  Score=96.63  Aligned_cols=64  Identities=34%  Similarity=0.749  Sum_probs=60.8

Q ss_pred             HccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCCcchHhhcChHHHHHHhhhcCCCCCC
Q psy4573         227 IHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTKALVRHHVRSHHSSARL  290 (306)
Q Consensus       227 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~  290 (306)
                      .+.++++|.|.+|++.|.....|..|++.|.++++|.|.+|++.|.....|..|+++|+++.+|
T Consensus        11 ~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           11 MTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             ccCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            4677899999999999999999999999999999999999999999999999999999998865

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.52  E-value=1.4e-15  Score=112.83  Aligned_cols=82  Identities=18%  Similarity=0.339  Sum_probs=56.9

Q ss_pred             CCcccCcCCCccC------CcHHHHHHHHHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCCcchHhhcChHHH
Q psy4573         204 RPAVCSYCGKGFR------RGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTKALV  277 (306)
Q Consensus       204 ~~~~C~~C~~~f~------~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l  277 (306)
                      +.+.|.+|.+.|.      ....|..|+ .|++++||.|++|++.|.....|..|+++|  +++|.|.+|++.|.....|
T Consensus        40 ~~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l  116 (129)
T 2wbt_A           40 KRLIRAIVKTLIHNPQLLDESSYLYRLL-ASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSA  116 (129)
T ss_dssp             HHHHHHHHHHHHHCGGGTTTHHHHHHHH-HHHHHCSEECTTTCCEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHHH
T ss_pred             CcccchhhhcccCCCcccCCHHHHHHHH-HhCCCCCeECCCCCcccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHHH
Confidence            3445555544433      445555555 566777777777777777777777777776  6777788888888777788


Q ss_pred             HHHhhhcCCCC
Q psy4573         278 RHHVRSHHSSA  288 (306)
Q Consensus       278 ~~H~~~~h~~~  288 (306)
                      ..|+++||++.
T Consensus       117 ~~H~~~h~~~~  127 (129)
T 2wbt_A          117 LDHVCKKHNIC  127 (129)
T ss_dssp             HHHHHHTTCCC
T ss_pred             HHHHHHHCCcc
Confidence            88877777654

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.51  E-value=1.1e-14  Score=95.65  Aligned_cols=61  Identities=25%  Similarity=0.542  Sum_probs=35.1

Q ss_pred             ccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCCcchHhhcChHHHHHHhhhcCCCC
Q psy4573         228 HTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTKALVRHHVRSHHSSA  288 (306)
Q Consensus       228 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  288 (306)
                      |.++++|.|.+|++.|.....|..|++.|.++++|.|.+|++.|.....|..|+++|+++.
T Consensus         4 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~   64 (70)
T 1x5w_A            4 GSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDM   64 (70)
T ss_dssp             CCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSS
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCC
Confidence            3445555555555555555555555555555555555555555555555555555555544

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.51  E-value=9e-15  Score=102.84  Aligned_cols=65  Identities=26%  Similarity=0.369  Sum_probs=33.9

Q ss_pred             CCCCcccCcCCCccCCcHHHHHHHH-Hc---cCCCCcccCcccCcCCChhHHHHH-HhhccCCCcccCCc
Q psy4573         202 NERPAVCSYCGKGFRRGDALTEHIR-IH---TGQRPYVCEICGKGFTQKQALNTH-KRGHTGEIPYHCEF  266 (306)
Q Consensus       202 ~~~~~~C~~C~~~f~~~~~l~~H~~-~h---~~~~~~~C~~C~~~f~~~~~L~~H-~~~h~~~~~~~C~~  266 (306)
                      +++||.|..|++.|...+.|..|++ +|   .+++||.|.+||+.|.....|..| ++.|.++++|.|.+
T Consensus        15 gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~   84 (102)
T 2ghf_A           15 VEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTM   84 (102)
T ss_dssp             CCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEE
T ss_pred             CCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCc
Confidence            4455555555555555555555554 24   334555555555555555555555 45555555555544

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.51  E-value=8.2e-15  Score=96.84  Aligned_cols=61  Identities=44%  Similarity=0.854  Sum_probs=36.1

Q ss_pred             HccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCCcchHhhcChHHHHHHhhhcCCC
Q psy4573         227 IHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTKALVRHHVRSHHSS  287 (306)
Q Consensus       227 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  287 (306)
                      +|.++++|.|++|++.|.....|..|++.|.++++|.|++|++.|.....|..|+++|+++
T Consensus         8 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~   68 (72)
T 1x6e_A            8 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSG   68 (72)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSS
T ss_pred             ccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCC
Confidence            4555555666666666666666666665565556666666666666666666666555544

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.50  E-value=6.3e-15  Score=109.20  Aligned_cols=71  Identities=24%  Similarity=0.373  Sum_probs=64.6

Q ss_pred             cCChHHHHHHHhhccCCCCcccCcCCCccCCcHHHHHHHHHccCCCCcccCcccCcCCChhHHHHHHhhccCCC
Q psy4573         187 LSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEI  260 (306)
Q Consensus       187 f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~  260 (306)
                      |.....|..|+ .|++++||.|.+|++.|.....|..|+++|  ++||.|++|++.|.....|..|++.|++..
T Consensus        57 ~~~~~~l~~h~-~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l~~H~~~h~~~~  127 (129)
T 2wbt_A           57 LDESSYLYRLL-ASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKKHNIC  127 (129)
T ss_dssp             TTTHHHHHHHH-HHHHHCSEECTTTCCEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHHHHHHHHHTTCCC
T ss_pred             cCCHHHHHHHH-HhCCCCCeECCCCCcccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHHHHHHHHHHCCcc
Confidence            34667777777 688899999999999999999999999998  889999999999999999999999998863

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.50  E-value=1.1e-14  Score=91.56  Aligned_cols=56  Identities=43%  Similarity=0.776  Sum_probs=37.1

Q ss_pred             CCCcccCcccCcCCChhHHHHHHhhccCCCcccCCcchHhhcChHHHHHHhhhcCC
Q psy4573         231 QRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTKALVRHHVRSHHS  286 (306)
Q Consensus       231 ~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~  286 (306)
                      +++|.|++|++.|.....|..|+++|.++++|.|++|+++|.....|..|++.||+
T Consensus         2 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            2 SSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ---CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            45677777777777777777777777777777777777777777777777776663

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.49  E-value=2.9e-14  Score=93.59  Aligned_cols=63  Identities=29%  Similarity=0.536  Sum_probs=49.3

Q ss_pred             ccCCCCcccCcCCCccCCcHHHHHHHHHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcc
Q psy4573         200 HTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPY  262 (306)
Q Consensus       200 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~  262 (306)
                      |.++++|.|.+|++.|.....|..|+++|.++++|.|++|++.|.....|..|++.|+++++.
T Consensus         4 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~   66 (70)
T 1x5w_A            4 GSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSG   66 (70)
T ss_dssp             CCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSCC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCCC
Confidence            566777888888888888888888887777778888888888888888888888877777653

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.49  E-value=1.3e-14  Score=101.98  Aligned_cols=70  Identities=16%  Similarity=0.293  Sum_probs=64.1

Q ss_pred             ccCCCCcccCcccCcCCChhHHHHHHh-hc---cCCCcccCCcchHhhcChHHHHHH-hhhcCCCCCCCcccccc
Q psy4573         228 HTGQRPYVCEICGKGFTQKQALNTHKR-GH---TGEIPYHCEFCSERFSTKALVRHH-VRSHHSSARLGLNLLDH  297 (306)
Q Consensus       228 h~~~~~~~C~~C~~~f~~~~~L~~H~~-~h---~~~~~~~C~~C~~~f~~~~~l~~H-~~~~h~~~~~~C~~c~~  297 (306)
                      -.|++||.|.+|++.|.....|..|++ .|   .++++|.|.+|+++|.....|..| +++|.++.+|.|.++..
T Consensus        13 ~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~~   87 (102)
T 2ghf_A           13 KKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVKR   87 (102)
T ss_dssp             CCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEECCC
T ss_pred             CCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCcccC
Confidence            357899999999999999999999998 48   568999999999999999999999 89999999999988643

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.48  E-value=1.9e-14  Score=97.57  Aligned_cols=60  Identities=22%  Similarity=0.541  Sum_probs=39.1

Q ss_pred             HccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCCcchHhhcChHHHHHHhhhcCC
Q psy4573         227 IHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTKALVRHHVRSHHS  286 (306)
Q Consensus       227 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~  286 (306)
                      ++.+.++|.|++|++.|.....|..|+++|+++++|.|.+|+++|.....|.+|++..|.
T Consensus        22 ~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~   81 (85)
T 2lv2_A           22 LSASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHP   81 (85)
T ss_dssp             SCCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCT
T ss_pred             CCCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCc
Confidence            344556666666666666666666666666666666666666666666666666655443

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.48  E-value=4.6e-15  Score=99.47  Aligned_cols=65  Identities=34%  Similarity=0.661  Sum_probs=40.4

Q ss_pred             HHHHHccCCCCcccCcccCcCCChhHHHHHHh-hccCC-CcccCCcchHhhcChHHHHHHhhhcCCC
Q psy4573         223 EHIRIHTGQRPYVCEICGKGFTQKQALNTHKR-GHTGE-IPYHCEFCSERFSTKALVRHHVRSHHSS  287 (306)
Q Consensus       223 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~-~h~~~-~~~~C~~C~~~f~~~~~l~~H~~~~h~~  287 (306)
                      +|+++|+++++|.|++|++.|.....|..|++ .|.++ ++|.|++|++.|.....|..|++++|+.
T Consensus         5 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~   71 (77)
T 2ct1_A            5 SSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSY   71 (77)
T ss_dssp             CCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCC
T ss_pred             ccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCC
Confidence            35556666666666666666666666666665 34442 5666666666666666666666666554

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.48  E-value=3.6e-14  Score=93.71  Aligned_cols=63  Identities=44%  Similarity=0.857  Sum_probs=51.1

Q ss_pred             hhccCCCCcccCcCCCccCCcHHHHHHHHHccCCCCcccCcccCcCCChhHHHHHHhhccCCC
Q psy4573         198 RTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEI  260 (306)
Q Consensus       198 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~  260 (306)
                      ++|.++++|.|.+|++.|.....|..|+++|.++++|+|++|++.|.....|..|+++|+++.
T Consensus         7 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A            7 GIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             CTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSSS
T ss_pred             cccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            457778888888888888888888888888888888888888888888888888888877654

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.45  E-value=1.9e-14  Score=93.29  Aligned_cols=60  Identities=27%  Similarity=0.598  Sum_probs=38.0

Q ss_pred             HccCCCCcccCcccCcCCChhHHHHHHhh-c-cCCCcccCCcchHhhcChHHHHHHhhhcCC
Q psy4573         227 IHTGQRPYVCEICGKGFTQKQALNTHKRG-H-TGEIPYHCEFCSERFSTKALVRHHVRSHHS  286 (306)
Q Consensus       227 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~-h-~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~  286 (306)
                      +|.++++|.|++|++.|.....|..|++. | .++++|.|++|++.|.....|..|++.+|+
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            4 TKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             EEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             ccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            35556666666666666666666666665 4 356666666666666666666666666654

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.45  E-value=5.7e-14  Score=88.15  Aligned_cols=56  Identities=43%  Similarity=0.780  Sum_probs=40.2

Q ss_pred             CCCcccCcCCCccCCcHHHHHHHHHccCCCCcccCcccCcCCChhHHHHHHhhccC
Q psy4573         203 ERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTG  258 (306)
Q Consensus       203 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  258 (306)
                      +++|.|.+|++.|.+...|..|+++|+++++|.|++|++.|.....|..|++.|++
T Consensus         2 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            2 SSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ---CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            46777777777777777777777777777777777777777777777777777653

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.45  E-value=1.9e-14  Score=96.38  Aligned_cols=68  Identities=26%  Similarity=0.452  Sum_probs=59.7

Q ss_pred             HHHHHhhccCCCCcccCcCCCccCCcHHHHHHHH-HccCC-CCcccCcccCcCCChhHHHHHHhhccCCC
Q psy4573         193 LRLHMRTHTNERPAVCSYCGKGFRRGDALTEHIR-IHTGQ-RPYVCEICGKGFTQKQALNTHKRGHTGEI  260 (306)
Q Consensus       193 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~  260 (306)
                      |.+|+++|.++++|.|.+|++.|.....|..|++ .|.++ ++|.|++|++.|.....|..|++.+++..
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~   72 (77)
T 2ct1_A            3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYS   72 (77)
T ss_dssp             CCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCCS
T ss_pred             CCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCCC
Confidence            3468889999999999999999999999999997 67764 89999999999999999999999877643

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.45  E-value=6.7e-14  Score=87.82  Aligned_cols=55  Identities=38%  Similarity=0.777  Sum_probs=32.9

Q ss_pred             CcccCcccCcCCChhHHHHHHhhccCCCcccCCcchHhhcChHHHHHHhhhcCCC
Q psy4573         233 PYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTKALVRHHVRSHHSS  287 (306)
Q Consensus       233 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  287 (306)
                      ||.|++|++.|.....|..|++.|.++++|.|++|+++|.....|..|+++|+++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   55 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHS   55 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhccc
Confidence            3556666666666666666666666666666666666666666666666655554

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.44  E-value=8.1e-14  Score=94.47  Aligned_cols=53  Identities=23%  Similarity=0.556  Sum_probs=28.0

Q ss_pred             cCCCCcccCcCCCccCCcHHHHHHHHHccCCCCcccCcccCcCCChhHHHHHH
Q psy4573         201 TNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHK  253 (306)
Q Consensus       201 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~  253 (306)
                      ...++|.|++|++.|.....|..|+++|++++||.|++|++.|.....|..|+
T Consensus        24 ~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~   76 (85)
T 2lv2_A           24 ASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHI   76 (85)
T ss_dssp             CCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHH
T ss_pred             CCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhC
Confidence            33444555555555555555555555555555555555555555555555554

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.43  E-value=1.6e-13  Score=85.99  Aligned_cols=56  Identities=32%  Similarity=0.665  Sum_probs=37.2

Q ss_pred             CcccCcCCCccCCcHHHHHHHHHccCCCCcccCcccCcCCChhHHHHHHhhccCCC
Q psy4573         205 PAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEI  260 (306)
Q Consensus       205 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~  260 (306)
                      ||.|.+|++.|.....|..|+++|.++++|.|++|++.|.....|..|+++|++++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            46666666666666666666666666666666666666666666666666666553

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.42  E-value=9.1e-14  Score=90.03  Aligned_cols=61  Identities=23%  Similarity=0.426  Sum_probs=50.2

Q ss_pred             hhccCCCCcccCcCCCccCCcHHHHHHHHH-c-cCCCCcccCcccCcCCChhHHHHHHhhccC
Q psy4573         198 RTHTNERPAVCSYCGKGFRRGDALTEHIRI-H-TGQRPYVCEICGKGFTQKQALNTHKRGHTG  258 (306)
Q Consensus       198 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-h-~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  258 (306)
                      ++|.++++|.|..|++.|.....|..|++. | .++++|.|++|++.|.....|..|++.|++
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             cccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            457778888888888888888888888877 6 477888888888888888888888887775

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.41  E-value=8.4e-14  Score=93.46  Aligned_cols=60  Identities=37%  Similarity=0.711  Sum_probs=40.5

Q ss_pred             ccCCCCcccCcccCcCCChhHHHHHHhhccC---CCcccCCcchHhhcChHHHHHHhhhcCCC
Q psy4573         228 HTGQRPYVCEICGKGFTQKQALNTHKRGHTG---EIPYHCEFCSERFSTKALVRHHVRSHHSS  287 (306)
Q Consensus       228 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~---~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  287 (306)
                      |+++++|.|.+|++.|.....|..|++.|.+   +++|.|.+|++.|.....|..|++.+|.+
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~   64 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPA   64 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTT
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCC
Confidence            5566667777777777777777777766664   66677777777777777777777555544

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.39  E-value=9.1e-16  Score=101.71  Aligned_cols=69  Identities=20%  Similarity=0.345  Sum_probs=42.0

Q ss_pred             HHHHHHHHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCCcchHhhcChHHHHHHhhhcCCCCCCCcccc
Q psy4573         220 ALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTKALVRHHVRSHHSSARLGLNLL  295 (306)
Q Consensus       220 ~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~c  295 (306)
                      .|..|+++|.++++|.|++|++.|.....|..       +++|.|.+|++.|.....|..|+++|+++.+|.|.+|
T Consensus         5 ~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A            5 SSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             SCCCCCCCCCCCSEEECSSSCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             hHHHHHHHhCCCCCeeCCcccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            34455555666666666666666665555544       4556666666666666666666666666666666655

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.39  E-value=5.4e-16  Score=102.80  Aligned_cols=70  Identities=26%  Similarity=0.402  Sum_probs=64.5

Q ss_pred             HHHHHHHhhccCCCCcccCcCCCccCCcHHHHHHHHHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCCcc
Q psy4573         191 NHLRLHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFC  267 (306)
Q Consensus       191 ~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  267 (306)
                      ..|..|++.|.++++|.|.+|++.|.....|..       +++|.|++|++.|.....|..|++.|+++++|.|++|
T Consensus         4 ~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A            4 GSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             CSCCCCCCCCCCCSEEECSSSCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             hhHHHHHHHhCCCCCeeCCcccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            456778999999999999999999999888776       7899999999999999999999999999999999987

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.38  E-value=4e-13  Score=85.16  Aligned_cols=50  Identities=36%  Similarity=0.917  Sum_probs=32.4

Q ss_pred             CcccCcccCcCCChhHHHHHHhhccCCCcccCCcchHhhcChHHHHHHhh
Q psy4573         233 PYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTKALVRHHVR  282 (306)
Q Consensus       233 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  282 (306)
                      ||.|++|++.|.....|..|++.|.++++|.|++|++.|.....|..|++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   51 (60)
T 2adr_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQ   51 (60)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHT
T ss_pred             cCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHH
Confidence            56666666666666666666666666666666666666666666666653

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.34  E-value=7.5e-13  Score=88.74  Aligned_cols=63  Identities=25%  Similarity=0.526  Sum_probs=48.3

Q ss_pred             ccCCCCcccCcCCCccCCcHHHHHHHHHccC---CCCcccCcccCcCCChhHHHHHHh-hccCCCcc
Q psy4573         200 HTNERPAVCSYCGKGFRRGDALTEHIRIHTG---QRPYVCEICGKGFTQKQALNTHKR-GHTGEIPY  262 (306)
Q Consensus       200 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~---~~~~~C~~C~~~f~~~~~L~~H~~-~h~~~~~~  262 (306)
                      |+++++|.|.+|++.|.....|..|+++|.+   +++|.|.+|++.|.....|..|++ .|.++.+.
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~   68 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLA   68 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSC
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            6677888888888888888888888888775   778888888888888888888884 44444443

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.33  E-value=1.3e-12  Score=82.68  Aligned_cols=54  Identities=37%  Similarity=0.853  Sum_probs=35.3

Q ss_pred             CcccCcCCCccCCcHHHHHHHHHccCCCCcccCcccCcCCChhHHHHHH-hhccC
Q psy4573         205 PAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHK-RGHTG  258 (306)
Q Consensus       205 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~-~~h~~  258 (306)
                      ||.|..|++.|.....|..|+++|+++++|.|++|++.|.....|..|+ +.|.+
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~   56 (60)
T 2adr_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG   56 (60)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             cCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCC
Confidence            5666666666666666666666666666666666666666666666665 34443

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.31  E-value=7.7e-13  Score=87.43  Aligned_cols=57  Identities=35%  Similarity=0.818  Sum_probs=26.8

Q ss_pred             ccCCCCcccC--cccCcCCChhHHHHHHhhccCCCcccCCcchHhhcChHHHHHHhhhc
Q psy4573         228 HTGQRPYVCE--ICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTKALVRHHVRSH  284 (306)
Q Consensus       228 h~~~~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~  284 (306)
                      +.++++|.|+  .|++.|.....|..|++.|.++++|.|++|+++|.....|..|+++|
T Consensus        14 ~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   72 (73)
T 1f2i_G           14 VPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH   72 (73)
T ss_dssp             CCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTC
T ss_pred             CCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhc
Confidence            3344444443  24444444444444444444444444444444444444444444443

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.31  E-value=1e-12  Score=86.83  Aligned_cols=65  Identities=43%  Similarity=0.850  Sum_probs=57.4

Q ss_pred             HHHHHh-hccCCCCcccC--cCCCccCCcHHHHHHHHHccCCCCcccCcccCcCCChhHHHHHHhhcc
Q psy4573         193 LRLHMR-THTNERPAVCS--YCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHT  257 (306)
Q Consensus       193 l~~H~~-~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~  257 (306)
                      +..|+. .+.++++|.|+  .|++.|.....|..|+++|.++++|.|++|++.|.....|..|+++|+
T Consensus         6 ~~~~~~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G            6 MNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             --CTTSCCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             ccchhhccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            444444 37789999997  599999999999999999999999999999999999999999999874

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.29  E-value=3.9e-12  Score=88.61  Aligned_cols=32  Identities=38%  Similarity=0.407  Sum_probs=17.0

Q ss_pred             cccCcccCcCCChhHHHHHHhhccCCCcccCC
Q psy4573         234 YVCEICGKGFTQKQALNTHKRGHTGEIPYHCE  265 (306)
Q Consensus       234 ~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~  265 (306)
                      |.|++|++.|.....|..|+++|+++++|.|.
T Consensus        63 ~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           63 EECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             TTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             cCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            45555555555555555555555555555553

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.28  E-value=4.6e-12  Score=88.23  Aligned_cols=62  Identities=29%  Similarity=0.441  Sum_probs=58.5

Q ss_pred             ceeccccccccCChHHHHHHHhh-ccCCCC--------cccCcCCCccCCcHHHHHHHHHccCCCCcccCc
Q psy4573         177 KFECEVCHRKLSTKNHLRLHMRT-HTNERP--------AVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEI  238 (306)
Q Consensus       177 ~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~--------~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  238 (306)
                      .|.|+.|++.|.....|..|++. |.++++        |.|.+|++.|.....|..|+++|++++||.|+.
T Consensus        25 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   95 (95)
T 2ej4_A           25 SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSSG   95 (95)
T ss_dssp             SSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSCC
T ss_pred             CCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            57899999999999999999998 888877        999999999999999999999999999999963

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.23  E-value=2.9e-12  Score=82.83  Aligned_cols=54  Identities=28%  Similarity=0.569  Sum_probs=26.1

Q ss_pred             CCCcccCcCCCccCCcHHHHHHHHHccCCCCcccC-cccCcCCChhHHHHHHhhccC
Q psy4573         203 ERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCE-ICGKGFTQKQALNTHKRGHTG  258 (306)
Q Consensus       203 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~-~C~~~f~~~~~L~~H~~~h~~  258 (306)
                      +++|.|..|++.|. ...|..|+++ .+++||.|+ +|++.|.....|..|+++|..
T Consensus         8 ~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~   62 (66)
T 2eod_A            8 KRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCN   62 (66)
T ss_dssp             CCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSS
T ss_pred             CCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhcc
Confidence            34444555555544 4444445444 444444454 444444444444444444433

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.22  E-value=5.5e-12  Score=81.52  Aligned_cols=57  Identities=21%  Similarity=0.480  Sum_probs=39.0

Q ss_pred             CCCCcccCcccCcCCChhHHHHHHhhccCCCcccCC-cchHhhcChHHHHHHhhhcCCCC
Q psy4573         230 GQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCE-FCSERFSTKALVRHHVRSHHSSA  288 (306)
Q Consensus       230 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~-~C~~~f~~~~~l~~H~~~~h~~~  288 (306)
                      ++++|.|..|++.|. ...|..|+++ .++++|.|+ .|+++|.....|..|+++|.+..
T Consensus         7 ~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~   64 (66)
T 2eod_A            7 GKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNTA   64 (66)
T ss_dssp             CCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSSC
T ss_pred             CCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhcccC
Confidence            456677777777777 7777777766 666777777 67777777777777776665544

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=5.6e-12  Score=75.11  Aligned_cols=44  Identities=41%  Similarity=0.598  Sum_probs=24.6

Q ss_pred             HHHHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCCcc
Q psy4573         224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFC  267 (306)
Q Consensus       224 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  267 (306)
                      |+++|+++++|.|++|++.|.....|..|++.|.++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            34445555555555555555555555555555555555555554

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.19  E-value=5.8e-12  Score=75.03  Aligned_cols=44  Identities=25%  Similarity=0.399  Sum_probs=25.9

Q ss_pred             HHHHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCCcc
Q psy4573         224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFC  267 (306)
Q Consensus       224 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  267 (306)
                      |+++|+++++|.|++|++.|.....|..|++.|.++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            44455555666666666666666666666666666666666554

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=5.3e-12  Score=75.20  Aligned_cols=44  Identities=34%  Similarity=0.539  Sum_probs=22.6

Q ss_pred             HHHHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCCcc
Q psy4573         224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFC  267 (306)
Q Consensus       224 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  267 (306)
                      |+++|+++++|.|++|++.|.....|..|+++|.++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            33444555555555555555555555555555555555555544

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.19  E-value=5.5e-12  Score=75.15  Aligned_cols=44  Identities=41%  Similarity=0.640  Sum_probs=22.4

Q ss_pred             HHHHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCCcc
Q psy4573         224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFC  267 (306)
Q Consensus       224 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  267 (306)
                      |+++|+++++|.|++|++.|.....|..|+++|.++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            33444455555555555555555555555555555555555444

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=7.1e-12  Score=74.67  Aligned_cols=44  Identities=32%  Similarity=0.549  Sum_probs=26.3

Q ss_pred             HHHHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCCcc
Q psy4573         224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFC  267 (306)
Q Consensus       224 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  267 (306)
                      |+++|+++++|.|++|++.|.....|..|+++|.++++|.|.+|
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            34455556666666666666666666666666666666666554

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.18  E-value=5.7e-12  Score=75.10  Aligned_cols=43  Identities=42%  Similarity=0.718  Sum_probs=21.5

Q ss_pred             HHHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCCcc
Q psy4573         225 IRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFC  267 (306)
Q Consensus       225 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  267 (306)
                      +++|+++++|.|++|++.|.....|..|+++|.++++|.|++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            4 GSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3444445555555555555555555555555555555555444

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=5.3e-12  Score=75.21  Aligned_cols=43  Identities=37%  Similarity=0.731  Sum_probs=21.2

Q ss_pred             HHHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCCcc
Q psy4573         225 IRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFC  267 (306)
Q Consensus       225 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  267 (306)
                      +++|+++++|.|++|++.|.....|..|++.|.++++|.|++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            4 GSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             cCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            3444444455555555555555555555555555555555444

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=4.8e-12  Score=75.41  Aligned_cols=44  Identities=36%  Similarity=0.557  Sum_probs=24.0

Q ss_pred             HHHHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCCcc
Q psy4573         224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFC  267 (306)
Q Consensus       224 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  267 (306)
                      |+++|.++++|.|++|++.|.....|..|+++|.++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             cccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34445555555555555555555555555555555555555544

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=7.2e-12  Score=74.64  Aligned_cols=44  Identities=36%  Similarity=0.586  Sum_probs=25.0

Q ss_pred             HHHHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCCcc
Q psy4573         224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFC  267 (306)
Q Consensus       224 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  267 (306)
                      |+++|+++++|.|++|++.|.....|..|++.|.++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            34455555555555555555555555555555555555555554

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=6.9e-12  Score=74.71  Aligned_cols=44  Identities=41%  Similarity=0.653  Sum_probs=25.0

Q ss_pred             HHHHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCCcc
Q psy4573         224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFC  267 (306)
Q Consensus       224 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  267 (306)
                      |+++|+++++|.|++|++.|.....|..|+++|.++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            44455555555555555555555555555555555555555554

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=6.9e-12  Score=74.71  Aligned_cols=44  Identities=39%  Similarity=0.610  Sum_probs=24.4

Q ss_pred             HHHHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCCcc
Q psy4573         224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFC  267 (306)
Q Consensus       224 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  267 (306)
                      |+++|.++++|.|++|++.|.....|..|++.|.++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34445555555555555555555555555555555555555554

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=6.6e-12  Score=74.78  Aligned_cols=44  Identities=36%  Similarity=0.515  Sum_probs=25.2

Q ss_pred             HHHHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCCcc
Q psy4573         224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFC  267 (306)
Q Consensus       224 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  267 (306)
                      |+++|+++++|.|++|++.|.....|..|+++|.++++|.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44455555555555555555555555555555555555555554

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=7e-12  Score=74.68  Aligned_cols=44  Identities=39%  Similarity=0.564  Sum_probs=21.6

Q ss_pred             HHHHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCCcc
Q psy4573         224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFC  267 (306)
Q Consensus       224 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  267 (306)
                      |+++|+++++|.|++|++.|.....|..|+++|.++++|.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            33444444555555555555555555555555555555555444

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=6.8e-12  Score=74.75  Aligned_cols=43  Identities=37%  Similarity=0.621  Sum_probs=21.2

Q ss_pred             HHHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCCcc
Q psy4573         225 IRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFC  267 (306)
Q Consensus       225 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  267 (306)
                      +++|+++++|.|++|++.|.....|..|++.|.++++|.|++|
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            4 GSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3444444555555555555555555555555555555555444

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=5.9e-12  Score=75.01  Aligned_cols=44  Identities=41%  Similarity=0.597  Sum_probs=22.8

Q ss_pred             HHHHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCCcc
Q psy4573         224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFC  267 (306)
Q Consensus       224 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  267 (306)
                      |+++|+++++|.|++|++.|.....|..|++.|.++++|.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            33445555555555555555555555555555555555555544

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=5.6e-12  Score=75.11  Aligned_cols=43  Identities=42%  Similarity=0.566  Sum_probs=20.1

Q ss_pred             HHHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCCcc
Q psy4573         225 IRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFC  267 (306)
Q Consensus       225 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  267 (306)
                      +++|+++++|.|++|++.|.....|..|+++|.++++|.|++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            4 GSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             cCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3344444444444444444444444444444444444444443

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.17  E-value=4.9e-12  Score=74.59  Aligned_cols=41  Identities=29%  Similarity=0.528  Sum_probs=19.0

Q ss_pred             HccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCCcc
Q psy4573         227 IHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFC  267 (306)
Q Consensus       227 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  267 (306)
                      +|.++++|.|++|++.|.....|..|++.|.++++|.|.+|
T Consensus         4 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            4 GSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34444444444444444444444444444444444444443

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=7.3e-12  Score=74.59  Aligned_cols=44  Identities=39%  Similarity=0.646  Sum_probs=22.1

Q ss_pred             HHHHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCCcc
Q psy4573         224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFC  267 (306)
Q Consensus       224 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  267 (306)
                      |+++|+++++|.|++|++.|.....|..|++.|.++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            33444455555555555555555555555555555555555444

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.17  E-value=6.6e-12  Score=74.80  Aligned_cols=44  Identities=34%  Similarity=0.553  Sum_probs=22.7

Q ss_pred             HHHHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCCcc
Q psy4573         224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFC  267 (306)
Q Consensus       224 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  267 (306)
                      |+++|+++++|.|++|++.|.....|..|++.|.++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            33444555555555555555555555555555555555555544

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=5.8e-12  Score=75.04  Aligned_cols=43  Identities=40%  Similarity=0.616  Sum_probs=20.7

Q ss_pred             HHHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCCcc
Q psy4573         225 IRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFC  267 (306)
Q Consensus       225 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  267 (306)
                      +++|+++++|.|++|++.|...+.|..|++.|.++++|.|.+|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            4 GSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             ccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            3344444444444444444444444444444444444444443

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.17  E-value=6.2e-12  Score=74.92  Aligned_cols=44  Identities=36%  Similarity=0.529  Sum_probs=21.7

Q ss_pred             HHHHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCCcc
Q psy4573         224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFC  267 (306)
Q Consensus       224 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  267 (306)
                      |+++|+++++|.|++|++.|.....|..|++.|.++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             cccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            33444444555555555555555555555555555555555444

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=5.4e-12  Score=75.20  Aligned_cols=44  Identities=39%  Similarity=0.592  Sum_probs=22.2

Q ss_pred             HHHHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCCcc
Q psy4573         224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFC  267 (306)
Q Consensus       224 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  267 (306)
                      |+++|+++++|.|++|++.|.....|..|++.|.++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             cccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            33444455555555555555555555555555555555555444

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=6.1e-12  Score=74.95  Aligned_cols=43  Identities=37%  Similarity=0.563  Sum_probs=21.7

Q ss_pred             HHHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCCcc
Q psy4573         225 IRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFC  267 (306)
Q Consensus       225 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  267 (306)
                      +++|+++++|.|++|++.|.....|..|++.|.++++|.|++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            4 GSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3444445555555555555555555555555555555555444

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=5.7e-12  Score=75.09  Aligned_cols=42  Identities=40%  Similarity=0.703  Sum_probs=19.0

Q ss_pred             HHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCCcc
Q psy4573         226 RIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFC  267 (306)
Q Consensus       226 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  267 (306)
                      ++|+++++|.|++|++.|.....|..|+++|.++++|.|++|
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            5 SSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            334444444444444444444444444444444444444443

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.17  E-value=7.2e-12  Score=74.64  Aligned_cols=43  Identities=44%  Similarity=0.678  Sum_probs=22.5

Q ss_pred             HHHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCCcc
Q psy4573         225 IRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFC  267 (306)
Q Consensus       225 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  267 (306)
                      +++|+++++|.|++|++.|.....|..|++.|.++++|.|.+|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            4 GSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3444555555555555555555555555555555555555544

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.16  E-value=6.2e-12  Score=74.94  Aligned_cols=44  Identities=36%  Similarity=0.523  Sum_probs=22.1

Q ss_pred             HHHHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCCcc
Q psy4573         224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFC  267 (306)
Q Consensus       224 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  267 (306)
                      |+++|+++++|.|++|++.|.....|..|+++|.++++|.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            33444445555555555555555555555555555555555444

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.16  E-value=7.6e-12  Score=74.52  Aligned_cols=44  Identities=36%  Similarity=0.583  Sum_probs=22.5

Q ss_pred             HHHHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCCcc
Q psy4573         224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFC  267 (306)
Q Consensus       224 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  267 (306)
                      |+++|+++++|.|++|++.|.....|..|++.|.++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             SCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            33444555555555555555555555555555555555555444

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=8e-12  Score=74.44  Aligned_cols=42  Identities=36%  Similarity=0.615  Sum_probs=19.3

Q ss_pred             HHHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCCc
Q psy4573         225 IRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEF  266 (306)
Q Consensus       225 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~  266 (306)
                      +++|+++++|.|++|++.|.....|..|++.|.++++|.|++
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytj_A            4 GSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSS   45 (46)
T ss_dssp             SCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSC
T ss_pred             ccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            334444444444444444444444444444444444444443

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=7.6e-12  Score=74.53  Aligned_cols=44  Identities=41%  Similarity=0.681  Sum_probs=22.1

Q ss_pred             HHHHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCCcc
Q psy4573         224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFC  267 (306)
Q Consensus       224 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  267 (306)
                      |+++|+++++|.|++|++.|.....|..|++.|.++++|.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             STTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             cccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34444455555555555555555555555555555555555444

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=5.6e-12  Score=75.14  Aligned_cols=44  Identities=30%  Similarity=0.438  Sum_probs=21.9

Q ss_pred             HHHHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCCcc
Q psy4573         224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFC  267 (306)
Q Consensus       224 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  267 (306)
                      |+++|+++++|.|++|++.|...+.|..|+++|.++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            33444445555555555555555555555555555555555444

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=7.8e-12  Score=74.49  Aligned_cols=43  Identities=44%  Similarity=0.726  Sum_probs=20.0

Q ss_pred             HHHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCCcc
Q psy4573         225 IRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFC  267 (306)
Q Consensus       225 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  267 (306)
                      +++|+++++|.|++|++.|.....|..|++.|.++++|.|++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            4 GSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3344444444444444444444444444444444444444443

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=7.9e-12  Score=74.46  Aligned_cols=43  Identities=35%  Similarity=0.579  Sum_probs=23.4

Q ss_pred             HHHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCCcc
Q psy4573         225 IRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFC  267 (306)
Q Consensus       225 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  267 (306)
                      +++|.++++|.|++|++.|.....|..|++.|.++++|.|++|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            4 GSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3445555555555555555555555555555555555555544

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=6.1e-12  Score=74.94  Aligned_cols=44  Identities=41%  Similarity=0.723  Sum_probs=21.6

Q ss_pred             HHHHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCCcc
Q psy4573         224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFC  267 (306)
Q Consensus       224 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  267 (306)
                      |+++|+++++|.|++|++.|.....|..|++.|.++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            33444444555555555555555555555555555555555443

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=7.6e-12  Score=74.52  Aligned_cols=42  Identities=38%  Similarity=0.673  Sum_probs=18.8

Q ss_pred             HHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCCcc
Q psy4573         226 RIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFC  267 (306)
Q Consensus       226 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  267 (306)
                      ++|.++++|.|++|++.|.....|..|+++|.++++|.|++|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            5 SSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             cccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            334444444444444444444444444444444444444443

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=7.2e-12  Score=74.63  Aligned_cols=42  Identities=31%  Similarity=0.472  Sum_probs=18.9

Q ss_pred             HHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCCcc
Q psy4573         226 RIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFC  267 (306)
Q Consensus       226 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  267 (306)
                      ++|+++++|.|++|++.|.....|..|++.|.++++|.|++|
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            5 SSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             ccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            334444444444444444444444444444444444444443

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=6.9e-12  Score=74.71  Aligned_cols=42  Identities=43%  Similarity=0.665  Sum_probs=18.9

Q ss_pred             HHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCCcc
Q psy4573         226 RIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFC  267 (306)
Q Consensus       226 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  267 (306)
                      ++|+++++|.|++|++.|.....|..|++.|.++++|.|++|
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            5 SSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             ccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            334444444444444444444444444444444444444443

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=5.9e-12  Score=75.00  Aligned_cols=43  Identities=42%  Similarity=0.634  Sum_probs=21.2

Q ss_pred             HHHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCCcc
Q psy4573         225 IRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFC  267 (306)
Q Consensus       225 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  267 (306)
                      +++|+++++|.|++|++.|.....|..|++.|.++++|.|++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            4 GSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            3344444555555555555555555555555555555555444

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.15  E-value=8.3e-12  Score=74.34  Aligned_cols=43  Identities=30%  Similarity=0.414  Sum_probs=20.5

Q ss_pred             HHHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCCcc
Q psy4573         225 IRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFC  267 (306)
Q Consensus       225 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  267 (306)
                      +++|+++++|.|++|++.|.....|..|+++|.++++|.|+.|
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            4 GSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             cccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3344444444444444444444444444444444444444443

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=5.8e-12  Score=75.06  Aligned_cols=44  Identities=36%  Similarity=0.617  Sum_probs=22.3

Q ss_pred             HHHHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCCcc
Q psy4573         224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFC  267 (306)
Q Consensus       224 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  267 (306)
                      |+++|+++++|.|++|++.|.....|..|+++|.++++|.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            33444455555555555555555555555555555555555444

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.14  E-value=9.9e-12  Score=74.01  Aligned_cols=42  Identities=36%  Similarity=0.712  Sum_probs=20.0

Q ss_pred             HHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCCcc
Q psy4573         226 RIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFC  267 (306)
Q Consensus       226 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  267 (306)
                      ++|.++++|.|++|++.|.....|..|++.|.++++|.|.+|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            5 SSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             SCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            344444444444444444444444444444444444444443

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=6.8e-12  Score=74.74  Aligned_cols=43  Identities=42%  Similarity=0.711  Sum_probs=20.9

Q ss_pred             HHHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCCcc
Q psy4573         225 IRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFC  267 (306)
Q Consensus       225 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  267 (306)
                      +++|+++++|.|++|++.|.....|..|+++|.++++|.|++|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            4 GSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            3344444445555555555555555555544444444544444

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.14  E-value=9.7e-12  Score=74.05  Aligned_cols=42  Identities=21%  Similarity=0.233  Sum_probs=19.5

Q ss_pred             HHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCCcc
Q psy4573         226 RIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFC  267 (306)
Q Consensus       226 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  267 (306)
                      ++|.++++|.|++|++.|.....|..|+++|.++++|.|.+|
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            5 SSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             cccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            344444444444444444444444444444444444444443

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.14  E-value=1.3e-11  Score=73.43  Aligned_cols=45  Identities=33%  Similarity=0.564  Sum_probs=40.7

Q ss_pred             HHHhhccCCCCcccCcCCCccCCcHHHHHHHHHccCCCCcccCcc
Q psy4573         195 LHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEIC  239 (306)
Q Consensus       195 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  239 (306)
                      +|+++|+++++|.|.+|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            467788999999999999999999999999999999999999887

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.14  E-value=1.9e-11  Score=72.75  Aligned_cols=44  Identities=39%  Similarity=0.646  Sum_probs=40.8

Q ss_pred             HHhhccCCCCcccCcCCCccCCcHHHHHHHHHccCCCCcccCcc
Q psy4573         196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEIC  239 (306)
Q Consensus       196 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  239 (306)
                      |+++|.++++|.|.+|++.|.....|..|+++|++++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            67789999999999999999999999999999999999999887

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.13  E-value=2.8e-11  Score=79.57  Aligned_cols=53  Identities=36%  Similarity=0.851  Sum_probs=25.7

Q ss_pred             CCCcccCc--CCCccCCcHHHHHHHHHccCCCCcccCc--ccCcCCChhHHHHHHhh
Q psy4573         203 ERPAVCSY--CGKGFRRGDALTEHIRIHTGQRPYVCEI--CGKGFTQKQALNTHKRG  255 (306)
Q Consensus       203 ~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~  255 (306)
                      .++|.|..  |++.|.....|..|+++|+++++|.|.+  |++.|.....|..|+++
T Consensus        15 ~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~   71 (72)
T 2epa_A           15 IRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRT   71 (72)
T ss_dssp             CCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTT
T ss_pred             cCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhc
Confidence            34455544  5555555555555555554444555532  55555444444444443

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.13  E-value=1.4e-11  Score=73.34  Aligned_cols=42  Identities=36%  Similarity=0.510  Sum_probs=21.2

Q ss_pred             HHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCCcc
Q psy4573         226 RIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFC  267 (306)
Q Consensus       226 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  267 (306)
                      ++|.++++|.|++|++.|.....|..|+++|.++++|.|.+|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            5 SSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            344445555555555555555555555555555555555444

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=8.4e-12  Score=74.34  Aligned_cols=42  Identities=43%  Similarity=0.752  Sum_probs=19.0

Q ss_pred             HHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCCcc
Q psy4573         226 RIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFC  267 (306)
Q Consensus       226 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  267 (306)
                      ++|+++++|.|++|++.|.....|..|+++|.++++|.|.+|
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            5 SSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            334444444444444444444444444444444444444443

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=1.9e-11  Score=72.78  Aligned_cols=45  Identities=38%  Similarity=0.595  Sum_probs=40.6

Q ss_pred             HHHhhccCCCCcccCcCCCccCCcHHHHHHHHHccCCCCcccCcc
Q psy4573         195 LHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEIC  239 (306)
Q Consensus       195 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  239 (306)
                      +|+++|+++++|.|.+|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CCcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            367788899999999999999999999999999999999999887

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=1.3e-11  Score=73.48  Aligned_cols=43  Identities=42%  Similarity=0.672  Sum_probs=21.0

Q ss_pred             HHHHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCCc
Q psy4573         224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEF  266 (306)
Q Consensus       224 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~  266 (306)
                      |+++|+++++|.|++|++.|.....|..|++.|.++++|.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ep3_A            3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTC
T ss_pred             CCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            3344444445555555555555555555555555555554443

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=1.7e-11  Score=73.28  Aligned_cols=44  Identities=41%  Similarity=0.569  Sum_probs=24.3

Q ss_pred             HHHHccCCCCcccCcccCcCCChhHHHHHHh-hccCCCcccCCcc
Q psy4573         224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKR-GHTGEIPYHCEFC  267 (306)
Q Consensus       224 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~-~h~~~~~~~C~~C  267 (306)
                      |+++|.++++|.|++|++.|.....|..|++ .|.++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             cccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            3444555555555555555555555555555 5555555555554

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=2.4e-11  Score=72.30  Aligned_cols=45  Identities=33%  Similarity=0.437  Sum_probs=41.0

Q ss_pred             HHHhhccCCCCcccCcCCCccCCcHHHHHHHHHccCCCCcccCcc
Q psy4573         195 LHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEIC  239 (306)
Q Consensus       195 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  239 (306)
                      +|+++|.++++|.|.+|++.|...+.|..|+++|+++++|.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            467788999999999999999999999999999999999999887

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.12  E-value=1.8e-11  Score=72.06  Aligned_cols=44  Identities=25%  Similarity=0.372  Sum_probs=38.6

Q ss_pred             HHhhccCCCCcccCcCCCccCCcHHHHHHHHHccCCCCcccCcc
Q psy4573         196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEIC  239 (306)
Q Consensus       196 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  239 (306)
                      |+++|.++++|.|.+|++.|...+.|..|+++|+++++|.|++|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45678888999999999999999999999999999999999877

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=2.4e-11  Score=72.29  Aligned_cols=45  Identities=29%  Similarity=0.462  Sum_probs=40.6

Q ss_pred             HHHhhccCCCCcccCcCCCccCCcHHHHHHHHHccCCCCcccCcc
Q psy4573         195 LHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEIC  239 (306)
Q Consensus       195 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  239 (306)
                      +|+++|+++++|.|.+|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            367788899999999999999999999999999999999999887

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=2.7e-11  Score=72.04  Aligned_cols=45  Identities=33%  Similarity=0.527  Sum_probs=40.8

Q ss_pred             HHHhhccCCCCcccCcCCCccCCcHHHHHHHHHccCCCCcccCcc
Q psy4573         195 LHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEIC  239 (306)
Q Consensus       195 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  239 (306)
                      +|+++|+++++|.|.+|++.|...+.|..|+++|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            477888999999999999999999999999999999999999876

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=2.1e-11  Score=72.59  Aligned_cols=45  Identities=33%  Similarity=0.499  Sum_probs=40.1

Q ss_pred             HHHhhccCCCCcccCcCCCccCCcHHHHHHHHHccCCCCcccCcc
Q psy4573         195 LHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEIC  239 (306)
Q Consensus       195 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  239 (306)
                      +|+++|.++++|.|.+|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            367788889999999999999999999999999999999999887

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=2e-11  Score=72.61  Aligned_cols=45  Identities=36%  Similarity=0.544  Sum_probs=40.0

Q ss_pred             HHHhhccCCCCcccCcCCCccCCcHHHHHHHHHccCCCCcccCcc
Q psy4573         195 LHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEIC  239 (306)
Q Consensus       195 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  239 (306)
                      +|+++|.++++|.|.+|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            367788889999999999999999999999999999999999887

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=1.3e-11  Score=73.51  Aligned_cols=42  Identities=36%  Similarity=0.646  Sum_probs=21.0

Q ss_pred             HHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCCcc
Q psy4573         226 RIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFC  267 (306)
Q Consensus       226 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  267 (306)
                      ++|.++++|.|++|++.|.....|..|++.|.++++|.|++|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            5 SSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            344444555555555555555555555555555555555444

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.11  E-value=2.1e-11  Score=72.55  Aligned_cols=45  Identities=33%  Similarity=0.531  Sum_probs=40.2

Q ss_pred             HHHhhccCCCCcccCcCCCccCCcHHHHHHHHHccCCCCcccCcc
Q psy4573         195 LHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEIC  239 (306)
Q Consensus       195 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  239 (306)
                      +|+++|+++++|.|.+|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            367788899999999999999999999999999999999999877

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=2.4e-11  Score=72.28  Aligned_cols=45  Identities=36%  Similarity=0.569  Sum_probs=40.4

Q ss_pred             HHHhhccCCCCcccCcCCCccCCcHHHHHHHHHccCCCCcccCcc
Q psy4573         195 LHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEIC  239 (306)
Q Consensus       195 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  239 (306)
                      +|+++|+++++|.|.+|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            367788899999999999999999999999999999999999887

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=1.7e-11  Score=72.92  Aligned_cols=45  Identities=27%  Similarity=0.401  Sum_probs=42.9

Q ss_pred             HHHhhccCCCcccCCcchHhhcChHHHHHHhhhcCCCCCCCcccc
Q psy4573         251 THKRGHTGEIPYHCEFCSERFSTKALVRHHVRSHHSSARLGLNLL  295 (306)
Q Consensus       251 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~c  295 (306)
                      +|++.|.++++|.|++|++.|.....|.+|+++|+++.+|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CCcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=2.1e-11  Score=72.56  Aligned_cols=45  Identities=36%  Similarity=0.575  Sum_probs=40.3

Q ss_pred             HHHhhccCCCCcccCcCCCccCCcHHHHHHHHHccCCCCcccCcc
Q psy4573         195 LHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEIC  239 (306)
Q Consensus       195 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  239 (306)
                      +|+++|.++++|.|.+|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CCcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            367788899999999999999999999999999999999999887

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=2.4e-11  Score=72.26  Aligned_cols=45  Identities=42%  Similarity=0.616  Sum_probs=40.3

Q ss_pred             HHHhhccCCCCcccCcCCCccCCcHHHHHHHHHccCCCCcccCcc
Q psy4573         195 LHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEIC  239 (306)
Q Consensus       195 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  239 (306)
                      +|+++|.++++|.|.+|++.|.....|..|+++|++++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CCccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            367788899999999999999999999999999999999999887

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.11  E-value=7.1e-11  Score=77.59  Aligned_cols=54  Identities=35%  Similarity=0.804  Sum_probs=32.3

Q ss_pred             CCCCcccCc--ccCcCCChhHHHHHHhhccCCCcccCCc--chHhhcChHHHHHHhhh
Q psy4573         230 GQRPYVCEI--CGKGFTQKQALNTHKRGHTGEIPYHCEF--CSERFSTKALVRHHVRS  283 (306)
Q Consensus       230 ~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~  283 (306)
                      ..++|.|.+  |++.|.....|..|++.|.++++|.|.+  |++.|.....|..|+++
T Consensus        14 ~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~   71 (72)
T 2epa_A           14 RIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRT   71 (72)
T ss_dssp             CCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTT
T ss_pred             ccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhc
Confidence            345566655  6666666666666666666666666643  66666666666666554

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=2.4e-11  Score=72.34  Aligned_cols=44  Identities=30%  Similarity=0.498  Sum_probs=39.5

Q ss_pred             HHhhccCCCCcccCcCCCccCCcHHHHHHHHHccCCCCcccCcc
Q psy4573         196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEIC  239 (306)
Q Consensus       196 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  239 (306)
                      |+++|.++++|.|.+|++.|.....|..|+++|++++||.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            66778889999999999999999999999999999999999887

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=2e-11  Score=72.66  Aligned_cols=45  Identities=33%  Similarity=0.493  Sum_probs=40.5

Q ss_pred             HHHhhccCCCCcccCcCCCccCCcHHHHHHHHHccCCCCcccCcc
Q psy4573         195 LHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEIC  239 (306)
Q Consensus       195 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  239 (306)
                      +|+++|+++++|.|.+|++.|...+.|..|+++|++++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            367788899999999999999999999999999999999999887

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=2.7e-11  Score=72.05  Aligned_cols=44  Identities=32%  Similarity=0.529  Sum_probs=39.2

Q ss_pred             HHhhccCCCCcccCcCCCccCCcHHHHHHHHHccCCCCcccCcc
Q psy4573         196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEIC  239 (306)
Q Consensus       196 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  239 (306)
                      |+++|.++++|.|.+|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            66778889999999999999999999999999999999999887

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.10  E-value=2.1e-11  Score=72.57  Aligned_cols=45  Identities=22%  Similarity=0.321  Sum_probs=42.9

Q ss_pred             HHHhhccCCCcccCCcchHhhcChHHHHHHhhhcCCCCCCCcccc
Q psy4573         251 THKRGHTGEIPYHCEFCSERFSTKALVRHHVRSHHSSARLGLNLL  295 (306)
Q Consensus       251 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~c  295 (306)
                      .|+++|.++++|.|.+|++.|.....|..|++.|+++.+|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CCcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            478899999999999999999999999999999999999999987

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=1.9e-11  Score=72.73  Aligned_cols=45  Identities=29%  Similarity=0.502  Sum_probs=43.0

Q ss_pred             HHHhhccCCCcccCCcchHhhcChHHHHHHhhhcCCCCCCCcccc
Q psy4573         251 THKRGHTGEIPYHCEFCSERFSTKALVRHHVRSHHSSARLGLNLL  295 (306)
Q Consensus       251 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~c  295 (306)
                      +|++.|.++++|.|++|+++|.....|..|++.|+++.+|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=2.1e-11  Score=72.59  Aligned_cols=45  Identities=36%  Similarity=0.621  Sum_probs=40.5

Q ss_pred             HHHhhccCCCCcccCcCCCccCCcHHHHHHHHHccCCCCcccCcc
Q psy4573         195 LHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEIC  239 (306)
Q Consensus       195 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  239 (306)
                      +|+++|.++++|.|.+|++.|.....|..|+++|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            367788899999999999999999999999999999999999887

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.10  E-value=1.9e-11  Score=72.72  Aligned_cols=45  Identities=31%  Similarity=0.450  Sum_probs=43.0

Q ss_pred             HHHhhccCCCcccCCcchHhhcChHHHHHHhhhcCCCCCCCcccc
Q psy4573         251 THKRGHTGEIPYHCEFCSERFSTKALVRHHVRSHHSSARLGLNLL  295 (306)
Q Consensus       251 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~c  295 (306)
                      .|++.|.++++|.|.+|+++|.....|..|+++|+++.+|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.10  E-value=3.5e-11  Score=74.28  Aligned_cols=42  Identities=43%  Similarity=0.897  Sum_probs=18.9

Q ss_pred             CCCCcccCcCCCccCCcHHHHHHHH-HccCCCCcccCcccCcC
Q psy4573         202 NERPAVCSYCGKGFRRGDALTEHIR-IHTGQRPYVCEICGKGF  243 (306)
Q Consensus       202 ~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f  243 (306)
                      ++++|.|.+|++.|.....|..|++ +|.++++|.|++|++.|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F   51 (54)
T 2eps_A            9 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGP   51 (54)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSS
T ss_pred             CCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCC
Confidence            3444444444444444444444443 44444444444444444

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=3e-11  Score=71.86  Aligned_cols=45  Identities=27%  Similarity=0.375  Sum_probs=40.6

Q ss_pred             HHHhhccCCCCcccCcCCCccCCcHHHHHHHHHccCCCCcccCcc
Q psy4573         195 LHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEIC  239 (306)
Q Consensus       195 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  239 (306)
                      +|+++|.++++|.|.+|++.|...+.|..|+++|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            367788899999999999999999999999999999999999887

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=2.2e-11  Score=72.45  Aligned_cols=45  Identities=29%  Similarity=0.435  Sum_probs=40.7

Q ss_pred             HHHhhccCCCCcccCcCCCccCCcHHHHHHHHHccCCCCcccCcc
Q psy4573         195 LHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEIC  239 (306)
Q Consensus       195 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  239 (306)
                      +|+++|.++++|.|.+|++.|...+.|..|+++|+++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            467788999999999999999999999999999999999999887

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=2.7e-11  Score=72.11  Aligned_cols=44  Identities=39%  Similarity=0.595  Sum_probs=39.6

Q ss_pred             HHhhccCCCCcccCcCCCccCCcHHHHHHHHHccCCCCcccCcc
Q psy4573         196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEIC  239 (306)
Q Consensus       196 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  239 (306)
                      |+++|.++++|.|.+|++.|.....|..|+++|++++||+|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56778889999999999999999999999999999999999887

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=2.7e-11  Score=72.07  Aligned_cols=45  Identities=27%  Similarity=0.512  Sum_probs=43.0

Q ss_pred             HHHhhccCCCcccCCcchHhhcChHHHHHHhhhcCCCCCCCcccc
Q psy4573         251 THKRGHTGEIPYHCEFCSERFSTKALVRHHVRSHHSSARLGLNLL  295 (306)
Q Consensus       251 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~c  295 (306)
                      .|+++|.++++|.|++|++.|.....|..|++.|+++.+|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=3.2e-11  Score=71.73  Aligned_cols=45  Identities=22%  Similarity=0.415  Sum_probs=42.8

Q ss_pred             HHHhhccCCCcccCCcchHhhcChHHHHHHhhhcCCCCCCCcccc
Q psy4573         251 THKRGHTGEIPYHCEFCSERFSTKALVRHHVRSHHSSARLGLNLL  295 (306)
Q Consensus       251 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~c  295 (306)
                      .|++.|.++++|.|.+|++.|.....|..|+++|+++.+|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.09  E-value=3.4e-11  Score=71.61  Aligned_cols=44  Identities=30%  Similarity=0.520  Sum_probs=39.1

Q ss_pred             HHhhccCCCCcccCcCCCccCCcHHHHHHHHHccCCCCcccCcc
Q psy4573         196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEIC  239 (306)
Q Consensus       196 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  239 (306)
                      |+++|.++++|.|.+|++.|...+.|..|+++|+++++|.|++|
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            56778888999999999999999999999999999999999887

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=2.2e-11  Score=72.44  Aligned_cols=41  Identities=39%  Similarity=0.683  Sum_probs=18.4

Q ss_pred             HHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCCc
Q psy4573         226 RIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEF  266 (306)
Q Consensus       226 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~  266 (306)
                      ++|+++++|.|++|++.|.....|..|++.|.++++|.|++
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em2_A            5 SSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSC
T ss_pred             CCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            33444444444444444444444444444444444444443

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=2.7e-11  Score=72.05  Aligned_cols=45  Identities=27%  Similarity=0.481  Sum_probs=42.9

Q ss_pred             HHHhhccCCCcccCCcchHhhcChHHHHHHhhhcCCCCCCCcccc
Q psy4573         251 THKRGHTGEIPYHCEFCSERFSTKALVRHHVRSHHSSARLGLNLL  295 (306)
Q Consensus       251 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~c  295 (306)
                      .|+++|.++++|.|++|++.|...+.|..|++.|+++.+|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             CcccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.09  E-value=2.1e-11  Score=72.59  Aligned_cols=45  Identities=18%  Similarity=0.293  Sum_probs=42.9

Q ss_pred             HHHhhccCCCcccCCcchHhhcChHHHHHHhhhcCCCCCCCcccc
Q psy4573         251 THKRGHTGEIPYHCEFCSERFSTKALVRHHVRSHHSSARLGLNLL  295 (306)
Q Consensus       251 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~c  295 (306)
                      +|+++|.++++|.|.+|++.|.....|..|+++|+++.+|.|.+|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CCcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=2.8e-11  Score=72.01  Aligned_cols=45  Identities=20%  Similarity=0.358  Sum_probs=42.7

Q ss_pred             HHHhhccCCCcccCCcchHhhcChHHHHHHhhhcCCCCCCCcccc
Q psy4573         251 THKRGHTGEIPYHCEFCSERFSTKALVRHHVRSHHSSARLGLNLL  295 (306)
Q Consensus       251 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~c  295 (306)
                      .|++.|.++++|.|.+|++.|.....|..|+++|+++.+|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             ccccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            378899999999999999999999999999999999999999887

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=2.5e-11  Score=72.21  Aligned_cols=45  Identities=29%  Similarity=0.488  Sum_probs=42.9

Q ss_pred             HHHhhccCCCcccCCcchHhhcChHHHHHHhhhcCCCCCCCcccc
Q psy4573         251 THKRGHTGEIPYHCEFCSERFSTKALVRHHVRSHHSSARLGLNLL  295 (306)
Q Consensus       251 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~c  295 (306)
                      .|+++|.++++|.|.+|++.|.....|..|+++|+++.+|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=2.2e-11  Score=72.50  Aligned_cols=45  Identities=33%  Similarity=0.534  Sum_probs=40.8

Q ss_pred             HHHhhccCCCCcccCcCCCccCCcHHHHHHHHHccCCCCcccCcc
Q psy4573         195 LHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEIC  239 (306)
Q Consensus       195 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  239 (306)
                      +|+++|+++++|.|.+|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CcCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            367788999999999999999999999999999999999999887

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=3.3e-11  Score=71.69  Aligned_cols=45  Identities=27%  Similarity=0.415  Sum_probs=42.7

Q ss_pred             HHHhhccCCCcccCCcchHhhcChHHHHHHhhhcCCCCCCCcccc
Q psy4573         251 THKRGHTGEIPYHCEFCSERFSTKALVRHHVRSHHSSARLGLNLL  295 (306)
Q Consensus       251 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~c  295 (306)
                      .|+++|.++++|.|.+|++.|.....|.+|++.|+++.+|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            378899999999999999999999999999999999999999987

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=2.6e-11  Score=72.13  Aligned_cols=45  Identities=27%  Similarity=0.372  Sum_probs=42.8

Q ss_pred             HHHhhccCCCcccCCcchHhhcChHHHHHHhhhcCCCCCCCcccc
Q psy4573         251 THKRGHTGEIPYHCEFCSERFSTKALVRHHVRSHHSSARLGLNLL  295 (306)
Q Consensus       251 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~c  295 (306)
                      +|++.|.++++|.|.+|++.|.....|..|++.|+++.+|.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999887

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.08  E-value=3.5e-11  Score=71.59  Aligned_cols=44  Identities=25%  Similarity=0.318  Sum_probs=39.5

Q ss_pred             HHhhccCCCCcccCcCCCccCCcHHHHHHHHHccCCCCcccCcc
Q psy4573         196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEIC  239 (306)
Q Consensus       196 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  239 (306)
                      |+++|.++++|.|.+|++.|...+.|..|+++|++++||+|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            3 SGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             cccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            66788889999999999999999999999999999999999877

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=2.8e-11  Score=71.97  Aligned_cols=45  Identities=27%  Similarity=0.532  Sum_probs=43.0

Q ss_pred             HHHhhccCCCcccCCcchHhhcChHHHHHHhhhcCCCCCCCcccc
Q psy4573         251 THKRGHTGEIPYHCEFCSERFSTKALVRHHVRSHHSSARLGLNLL  295 (306)
Q Consensus       251 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~c  295 (306)
                      .|++.|.++++|.|.+|+++|.....|..|++.|+++.+|.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.08  E-value=2.6e-11  Score=72.15  Aligned_cols=45  Identities=22%  Similarity=0.335  Sum_probs=42.9

Q ss_pred             HHHhhccCCCcccCCcchHhhcChHHHHHHhhhcCCCCCCCcccc
Q psy4573         251 THKRGHTGEIPYHCEFCSERFSTKALVRHHVRSHHSSARLGLNLL  295 (306)
Q Consensus       251 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~c  295 (306)
                      +|+++|.++++|.|.+|+++|.....|..|+++|+++.+|.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.08  E-value=3.7e-11  Score=71.42  Aligned_cols=45  Identities=27%  Similarity=0.449  Sum_probs=42.9

Q ss_pred             HHHhhccCCCcccCCcchHhhcChHHHHHHhhhcCCCCCCCcccc
Q psy4573         251 THKRGHTGEIPYHCEFCSERFSTKALVRHHVRSHHSSARLGLNLL  295 (306)
Q Consensus       251 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~c  295 (306)
                      .|++.|.++++|.|.+|+++|.....|..|+++|+++.+|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CSCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=3e-11  Score=71.89  Aligned_cols=44  Identities=32%  Similarity=0.548  Sum_probs=38.8

Q ss_pred             HHhhccCCCCcccCcCCCccCCcHHHHHHHHHccCCCCcccCcc
Q psy4573         196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEIC  239 (306)
Q Consensus       196 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  239 (306)
                      |+++|.++++|.|.+|++.|.....|..|+++|++++||.|++|
T Consensus         3 h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            66778888999999999999999999999999999999999877

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.08  E-value=3.8e-11  Score=71.42  Aligned_cols=45  Identities=27%  Similarity=0.403  Sum_probs=42.7

Q ss_pred             HHHhhccCCCcccCCcchHhhcChHHHHHHhhhcCCCCCCCcccc
Q psy4573         251 THKRGHTGEIPYHCEFCSERFSTKALVRHHVRSHHSSARLGLNLL  295 (306)
Q Consensus       251 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~c  295 (306)
                      .|++.|.++++|.|++|+++|.....|..|++.|+++.+|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            378889999999999999999999999999999999999999987

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.07  E-value=1.1e-10  Score=71.99  Aligned_cols=46  Identities=37%  Similarity=0.741  Sum_probs=29.5

Q ss_pred             ccCCCCcccCcccCcCCChhHHHHHHh-hccCCCcccCCcchHhhcC
Q psy4573         228 HTGQRPYVCEICGKGFTQKQALNTHKR-GHTGEIPYHCEFCSERFST  273 (306)
Q Consensus       228 h~~~~~~~C~~C~~~f~~~~~L~~H~~-~h~~~~~~~C~~C~~~f~~  273 (306)
                      |.++++|.|++|++.|.....|..|++ .|.++++|.|.+|++.|.+
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            7 GSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            455566666666666666666666665 6666666666666666653

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=3.6e-11  Score=71.49  Aligned_cols=45  Identities=24%  Similarity=0.410  Sum_probs=42.8

Q ss_pred             HHHhhccCCCcccCCcchHhhcChHHHHHHhhhcCCCCCCCcccc
Q psy4573         251 THKRGHTGEIPYHCEFCSERFSTKALVRHHVRSHHSSARLGLNLL  295 (306)
Q Consensus       251 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~c  295 (306)
                      .|++.|.++++|.|.+|+++|.....|..|++.|+++.+|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=4.6e-11  Score=69.52  Aligned_cols=39  Identities=26%  Similarity=0.513  Sum_probs=20.6

Q ss_pred             HHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccC
Q psy4573         226 RIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHC  264 (306)
Q Consensus       226 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C  264 (306)
                      ++|.++++|.|++|++.|.....|..|+++|.++++|.|
T Consensus         3 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2yte_A            3 SGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS   41 (42)
T ss_dssp             SSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCC
T ss_pred             cCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            344555555555555555555555555555555555554

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=2.2e-11  Score=72.47  Aligned_cols=45  Identities=22%  Similarity=0.461  Sum_probs=43.0

Q ss_pred             HHHhhccCCCcccCCcchHhhcChHHHHHHhhhcCCCCCCCcccc
Q psy4573         251 THKRGHTGEIPYHCEFCSERFSTKALVRHHVRSHHSSARLGLNLL  295 (306)
Q Consensus       251 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~c  295 (306)
                      .|++.|.++++|.|.+|+++|.....|..|+++|+++.+|.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.06  E-value=3.9e-11  Score=69.84  Aligned_cols=38  Identities=39%  Similarity=0.760  Sum_probs=18.4

Q ss_pred             HccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccC
Q psy4573         227 IHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHC  264 (306)
Q Consensus       227 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C  264 (306)
                      +|+++++|.|++|++.|.....|..|+++|.++++|.|
T Consensus         4 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2el5_A            4 GSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS   41 (42)
T ss_dssp             SSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCC
T ss_pred             CCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCC
Confidence            34444444444444444444444444444444444444

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=4.1e-11  Score=71.28  Aligned_cols=44  Identities=32%  Similarity=0.518  Sum_probs=38.1

Q ss_pred             HHhhccCCCCcccCcCCCccCCcHHHHHHHHHccCCCCcccCcc
Q psy4573         196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEIC  239 (306)
Q Consensus       196 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  239 (306)
                      |+++|.++++|.|.+|++.|.....|..|+++|+++++|.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            56678888889999999999999999999988988889998877

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=3.5e-11  Score=71.56  Aligned_cols=45  Identities=27%  Similarity=0.465  Sum_probs=42.8

Q ss_pred             HHHhhccCCCcccCCcchHhhcChHHHHHHhhhcCCCCCCCcccc
Q psy4573         251 THKRGHTGEIPYHCEFCSERFSTKALVRHHVRSHHSSARLGLNLL  295 (306)
Q Consensus       251 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~c  295 (306)
                      .|+++|.++++|.|++|+++|.....|..|+++|+++.+|.|.+|
T Consensus         2 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            378899999999999999999999999999999999999999987

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=5.8e-11  Score=70.91  Aligned_cols=44  Identities=32%  Similarity=0.532  Sum_probs=39.4

Q ss_pred             HHhhccCCCCcccCcCCCccCCcHHHHHHHH-HccCCCCcccCcc
Q psy4573         196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIR-IHTGQRPYVCEIC  239 (306)
Q Consensus       196 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C  239 (306)
                      |+++|.++++|.|.+|++.|.....|..|++ +|.+++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             cccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            6678888999999999999999999999998 8999999999887

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=5.7e-11  Score=70.62  Aligned_cols=42  Identities=43%  Similarity=0.651  Sum_probs=22.2

Q ss_pred             HHHHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCC
Q psy4573         224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCE  265 (306)
Q Consensus       224 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~  265 (306)
                      |+++|+++++|.|++|++.|.....|..|++.|.++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enf_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCS
T ss_pred             CCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCC
Confidence            334455555555555555555555555555555555555554

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=6.2e-11  Score=70.47  Aligned_cols=42  Identities=43%  Similarity=0.711  Sum_probs=22.2

Q ss_pred             HHHHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCC
Q psy4573         224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCE  265 (306)
Q Consensus       224 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~  265 (306)
                      |+++|+++++|.|++|++.|.....|..|++.|.++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq2_A            3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCC
T ss_pred             cccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            344455555555555555555555555555555555555554

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=6.6e-11  Score=70.32  Aligned_cols=42  Identities=43%  Similarity=0.713  Sum_probs=22.3

Q ss_pred             HHHHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCC
Q psy4573         224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCE  265 (306)
Q Consensus       224 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~  265 (306)
                      |+++|+++++|.|++|++.|.....|..|+++|.++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep1_A            3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS   44 (46)
T ss_dssp             CCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSS
T ss_pred             cccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            344455555555555555555555555555555555555554

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.04  E-value=6.9e-11  Score=70.27  Aligned_cols=45  Identities=27%  Similarity=0.398  Sum_probs=42.5

Q ss_pred             HHHhhccCCCcccCCcchHhhcChHHHHHHhhhcCCCCCCCcccc
Q psy4573         251 THKRGHTGEIPYHCEFCSERFSTKALVRHHVRSHHSSARLGLNLL  295 (306)
Q Consensus       251 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~c  295 (306)
                      .|++.|.++++|.|.+|++.|.....|..|+++|+++.+|.|.+|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            2 SSGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            367889999999999999999999999999999999999999987

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=4.5e-11  Score=71.08  Aligned_cols=45  Identities=24%  Similarity=0.448  Sum_probs=42.5

Q ss_pred             HHHhhccCCCcccCCcchHhhcChHHHHHHhhhcCCCCCCCcccc
Q psy4573         251 THKRGHTGEIPYHCEFCSERFSTKALVRHHVRSHHSSARLGLNLL  295 (306)
Q Consensus       251 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~c  295 (306)
                      +|++.|.++++|.|.+|++.|.....|..|++.|+++.+|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999865

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=6.6e-11  Score=70.35  Aligned_cols=42  Identities=40%  Similarity=0.662  Sum_probs=21.8

Q ss_pred             HHHHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCC
Q psy4573         224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCE  265 (306)
Q Consensus       224 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~  265 (306)
                      |+++|.++++|.|++|++.|.....|..|++.|.++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2emg_A            3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS   44 (46)
T ss_dssp             CCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            334445555555555555555555555555555555555554

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=6.6e-11  Score=70.34  Aligned_cols=42  Identities=43%  Similarity=0.666  Sum_probs=21.9

Q ss_pred             HHHHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCC
Q psy4573         224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCE  265 (306)
Q Consensus       224 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~  265 (306)
                      |+++|+++++|.|++|++.|.....|..|++.|.++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yti_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTT
T ss_pred             CCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCC
Confidence            334455555555555555555555555555555555555554

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=7.8e-11  Score=70.03  Aligned_cols=44  Identities=36%  Similarity=0.646  Sum_probs=39.1

Q ss_pred             HHhhccCCCCcccCcCCCccCCcHHHHHHHHHccCCCCcccCcc
Q psy4573         196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEIC  239 (306)
Q Consensus       196 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  239 (306)
                      |+++|.++++|.|.+|++.|.....|..|+++|+++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            66788889999999999999999999999999999999999865

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=7.7e-11  Score=70.06  Aligned_cols=42  Identities=43%  Similarity=0.748  Sum_probs=21.5

Q ss_pred             HHHHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCC
Q psy4573         224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCE  265 (306)
Q Consensus       224 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~  265 (306)
                      |+++|+++++|.|++|++.|.....|..|+++|.++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yth_A            3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCC
T ss_pred             cccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            334445555555555555555555555555555555555553

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=7.2e-11  Score=70.17  Aligned_cols=42  Identities=40%  Similarity=0.698  Sum_probs=22.6

Q ss_pred             HHHHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCC
Q psy4573         224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCE  265 (306)
Q Consensus       224 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~  265 (306)
                      |+++|.++++|.|++|++.|.....|..|++.|.++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em6_A            3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTT
T ss_pred             CccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            344455555555555555555555555555555555555554

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=5.3e-11  Score=70.78  Aligned_cols=41  Identities=44%  Similarity=0.672  Sum_probs=19.2

Q ss_pred             HHHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCC
Q psy4573         225 IRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCE  265 (306)
Q Consensus       225 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~  265 (306)
                      +++|+++++|.|++|++.|.....|..|+++|.++++|.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytp_A            4 GSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSC
T ss_pred             ccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            33444444444444444444444444444444444444443

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.03  E-value=9.9e-11  Score=69.21  Aligned_cols=40  Identities=30%  Similarity=0.716  Sum_probs=20.5

Q ss_pred             ccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCCcc
Q psy4573         228 HTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFC  267 (306)
Q Consensus       228 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  267 (306)
                      |+++++|.|++|++.|.....|..|+++|.++++|.|++|
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~c   44 (45)
T 2epq_A            5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSS   44 (45)
T ss_dssp             CSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCC
T ss_pred             cCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCC
Confidence            4444555555555555555555555555555555555544

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.03  E-value=5e-11  Score=70.89  Aligned_cols=39  Identities=44%  Similarity=0.767  Sum_probs=16.9

Q ss_pred             HHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccC
Q psy4573         226 RIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHC  264 (306)
Q Consensus       226 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C  264 (306)
                      ++|.++++|.|++|++.|.....|..|+++|.++++|.|
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emj_A            5 SSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSS
T ss_pred             CCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            334444444444444444444444444444444444444

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.03  E-value=5.1e-11  Score=70.84  Aligned_cols=38  Identities=53%  Similarity=0.864  Sum_probs=16.4

Q ss_pred             HccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccC
Q psy4573         227 IHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHC  264 (306)
Q Consensus       227 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C  264 (306)
                      +|+++++|.|++|++.|.....|..|++.|.++++|.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2em4_A            6 SGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP   43 (46)
T ss_dssp             CCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCC
T ss_pred             ccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            34444444444444444444444444444444444444

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=6.2e-11  Score=70.46  Aligned_cols=40  Identities=45%  Similarity=0.734  Sum_probs=18.5

Q ss_pred             HHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCC
Q psy4573         226 RIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCE  265 (306)
Q Consensus       226 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~  265 (306)
                      ++|+++++|.|++|++.|.....|..|++.|.++++|.|+
T Consensus         5 ~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emi_A            5 SSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS   44 (46)
T ss_dssp             CSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCC
T ss_pred             cccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCC
Confidence            3444444444444444444444444444444444444443

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=7.1e-11  Score=70.21  Aligned_cols=42  Identities=40%  Similarity=0.664  Sum_probs=21.2

Q ss_pred             HHHHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCC
Q psy4573         224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCE  265 (306)
Q Consensus       224 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~  265 (306)
                      |+++|+++++|.|++|++.|.....|..|++.|.++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq1_A            3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCC
T ss_pred             cccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            334444555555555555555555555555555555555543

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=8.3e-11  Score=69.91  Aligned_cols=41  Identities=37%  Similarity=0.681  Sum_probs=22.1

Q ss_pred             HHHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCC
Q psy4573         225 IRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCE  265 (306)
Q Consensus       225 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~  265 (306)
                      +++|.++++|.|++|++.|.....|..|++.|.++++|.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eon_A            4 GSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS   44 (46)
T ss_dssp             SSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTS
T ss_pred             CCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCC
Confidence            34455555555555555555555555555555555555554

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=5.9e-11  Score=70.55  Aligned_cols=38  Identities=39%  Similarity=0.805  Sum_probs=16.3

Q ss_pred             HccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccC
Q psy4573         227 IHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHC  264 (306)
Q Consensus       227 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C  264 (306)
                      +|+++++|.|++|++.|.....|..|++.|.++++|.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eow_A            6 SGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP   43 (46)
T ss_dssp             CSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCT
T ss_pred             CCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCC
Confidence            34444444444444444444444444444444444444

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=1e-10  Score=69.53  Aligned_cols=41  Identities=34%  Similarity=0.543  Sum_probs=25.1

Q ss_pred             HccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCCcc
Q psy4573         227 IHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFC  267 (306)
Q Consensus       227 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  267 (306)
                      +|.++++|.|++|++.|.....|..|+++|.++++|.|++|
T Consensus         6 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            6 SGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45556666666666666666666666666666666666554

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=6.2e-11  Score=70.47  Aligned_cols=38  Identities=47%  Similarity=0.878  Sum_probs=16.2

Q ss_pred             HccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccC
Q psy4573         227 IHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHC  264 (306)
Q Consensus       227 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C  264 (306)
                      +|+++++|.|.+|++.|.....|..|++.|.++++|.|
T Consensus         6 ~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2em3_A            6 SGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP   43 (46)
T ss_dssp             CCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCS
T ss_pred             CCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            34444444444444444444444444444444444444

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=8.7e-11  Score=69.81  Aligned_cols=41  Identities=41%  Similarity=0.607  Sum_probs=19.7

Q ss_pred             HHHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCC
Q psy4573         225 IRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCE  265 (306)
Q Consensus       225 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~  265 (306)
                      +++|.++++|.|++|++.|.....|..|+++|.++++|.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            4 GSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            33444444444444444444444444444444444444443

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=6.9e-11  Score=70.23  Aligned_cols=41  Identities=49%  Similarity=0.826  Sum_probs=19.8

Q ss_pred             HHHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCC
Q psy4573         225 IRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCE  265 (306)
Q Consensus       225 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~  265 (306)
                      +++|.++++|.|++|++.|.....|..|++.|.++++|.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~   44 (46)
T 2yts_A            4 GSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS   44 (46)
T ss_dssp             SCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCC
T ss_pred             CCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCC
Confidence            33444444444444544444444444444444444444443

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=6.4e-11  Score=70.38  Aligned_cols=38  Identities=42%  Similarity=0.746  Sum_probs=16.8

Q ss_pred             HccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccC
Q psy4573         227 IHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHC  264 (306)
Q Consensus       227 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C  264 (306)
                      +|+++++|.|++|++.|.....|..|+++|.++++|.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ytf_A            6 SGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP   43 (46)
T ss_dssp             SSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCC
T ss_pred             CCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            34444444444444444444444444444444444444

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=7e-11  Score=70.21  Aligned_cols=41  Identities=46%  Similarity=0.748  Sum_probs=19.7

Q ss_pred             HHHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCC
Q psy4573         225 IRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCE  265 (306)
Q Consensus       225 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~  265 (306)
                      +++|+++++|.|++|++.|.....|..|++.|.++++|.|+
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yrj_A            4 GSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSC
T ss_pred             ccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            33444444444444444444444444444444444444443

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=9.1e-11  Score=69.73  Aligned_cols=40  Identities=38%  Similarity=0.626  Sum_probs=19.0

Q ss_pred             HHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCC
Q psy4573         226 RIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCE  265 (306)
Q Consensus       226 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~  265 (306)
                      ++|.++++|.|++|++.|.....|..|++.|.++++|.|+
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en9_A            5 SSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS   44 (46)
T ss_dssp             SSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCC
T ss_pred             CCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            3444444444444444444444444444444444444443

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=6.6e-11  Score=70.32  Aligned_cols=41  Identities=44%  Similarity=0.743  Sum_probs=18.9

Q ss_pred             HHHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCC
Q psy4573         225 IRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCE  265 (306)
Q Consensus       225 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~  265 (306)
                      +++|.++++|.|.+|++.|.....|..|++.|.++++|.|+
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~   44 (46)
T 2eor_A            4 GSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS   44 (46)
T ss_dssp             SSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSST
T ss_pred             CcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCC
Confidence            33444444444444444444444444444444444444443

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=9.3e-11  Score=68.91  Aligned_cols=41  Identities=44%  Similarity=0.680  Sum_probs=21.2

Q ss_pred             HHHHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccC
Q psy4573         224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHC  264 (306)
Q Consensus       224 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C  264 (306)
                      |+++|+++++|.|++|++.|.....|..|++.|.++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2en7_A            3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS   43 (44)
T ss_dssp             SCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCC
T ss_pred             CCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCC
Confidence            33444555555555555555555555555555555555554

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.01  E-value=1.3e-10  Score=69.72  Aligned_cols=40  Identities=43%  Similarity=0.706  Sum_probs=19.9

Q ss_pred             cCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCCcch
Q psy4573         229 TGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCS  268 (306)
Q Consensus       229 ~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~  268 (306)
                      .++++|.|.+|++.|.....|..|+++|.++++|.|.+|+
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~   47 (48)
T 2epr_A            8 RTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS   47 (48)
T ss_dssp             CCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCC
T ss_pred             CCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCC
Confidence            3444455555555555555555555555555555555544

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.01  E-value=4.9e-12  Score=80.62  Aligned_cols=48  Identities=21%  Similarity=0.436  Sum_probs=22.2

Q ss_pred             HHHHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCCcchHhhcCh
Q psy4573         224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTK  274 (306)
Q Consensus       224 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~  274 (306)
                      |+++|++++||.|++||+.|.....|.   +.|.++++|.|++|++.|...
T Consensus         5 h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~   52 (62)
T 1vd4_A            5 DERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEED   52 (62)
T ss_dssp             CSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEEC
T ss_pred             HHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccC
Confidence            334444444444444444444444443   344444444444444444433

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1.4e-10  Score=68.83  Aligned_cols=41  Identities=39%  Similarity=0.697  Sum_probs=22.3

Q ss_pred             HccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCCcc
Q psy4573         227 IHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFC  267 (306)
Q Consensus       227 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  267 (306)
                      +|+++++|.|++|++.|.....|..|++.|.++++|.|.+|
T Consensus         6 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            6 SGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            34455555555555555555555555555555555555544

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.00  E-value=9.7e-11  Score=68.12  Aligned_cols=40  Identities=43%  Similarity=0.741  Sum_probs=23.0

Q ss_pred             HHHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccC
Q psy4573         225 IRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHC  264 (306)
Q Consensus       225 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C  264 (306)
                      +++|.++++|.|++|++.|.....|..|++.|.++++|.|
T Consensus         3 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            3 SGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            3445555556666666666655566666555555555554

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=7.3e-11  Score=69.39  Aligned_cols=40  Identities=35%  Similarity=0.634  Sum_probs=19.0

Q ss_pred             HHHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccC
Q psy4573         225 IRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHC  264 (306)
Q Consensus       225 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C  264 (306)
                      +++|+++++|.|++|++.|.....|..|+++|.++++|.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eoj_A            4 GSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS   43 (44)
T ss_dssp             CCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCC
T ss_pred             ccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCC
Confidence            3344444444444444444444444444444444444444

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.00  E-value=8.4e-11  Score=69.14  Aligned_cols=39  Identities=28%  Similarity=0.544  Sum_probs=16.8

Q ss_pred             HHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccC
Q psy4573         226 RIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHC  264 (306)
Q Consensus       226 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C  264 (306)
                      ++|.+++||.|++|++.|.....|..|+++|.++++|.|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2yu5_A            5 SSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSS   43 (44)
T ss_dssp             CCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCC
T ss_pred             cccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCC
Confidence            334444444444444444444444444444444444443

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=9.2e-11  Score=68.94  Aligned_cols=39  Identities=41%  Similarity=0.710  Sum_probs=17.2

Q ss_pred             HHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccC
Q psy4573         226 RIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHC  264 (306)
Q Consensus       226 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C  264 (306)
                      ++|.++++|.|++|++.|.....|..|+++|.++++|.|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eof_A            5 SSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS   43 (44)
T ss_dssp             SCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCC
T ss_pred             cCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCC
Confidence            334444444444444444444444444444444444444

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=8e-11  Score=68.45  Aligned_cols=40  Identities=43%  Similarity=0.733  Sum_probs=20.6

Q ss_pred             HHHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccC
Q psy4573         225 IRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHC  264 (306)
Q Consensus       225 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C  264 (306)
                      +++|+++++|.|++|++.|.....|..|+++|.++++|.|
T Consensus         3 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            3 SGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             ccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            3444555555555555555555555555555555555544

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.99  E-value=6.4e-11  Score=73.07  Aligned_cols=49  Identities=16%  Similarity=0.171  Sum_probs=24.6

Q ss_pred             ccCCcHHHHHHHHHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcc
Q psy4573         214 GFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPY  262 (306)
Q Consensus       214 ~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~  262 (306)
                      .|.....|..|+++|.++++|.|++|++.|.....|..|+++|.++++|
T Consensus         5 ~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   53 (54)
T 1yui_A            5 RAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPG   53 (54)
T ss_dssp             CCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCC
T ss_pred             ccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCC
Confidence            3444444444555555555555555555555555555555555554443

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.9e-10  Score=66.77  Aligned_cols=42  Identities=21%  Similarity=0.416  Sum_probs=36.7

Q ss_pred             HHhhccCCCCcccCcCCCccCCcHHHHHHHHHccCCCCcccC
Q psy4573         196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCE  237 (306)
Q Consensus       196 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  237 (306)
                      |+++|.++++|.|.+|++.|...+.|..|+++|+++++|+|+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            456788889999999999999999999999999999998884

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.98  E-value=9.8e-11  Score=69.58  Aligned_cols=40  Identities=23%  Similarity=0.333  Sum_probs=18.9

Q ss_pred             HHccCCCCcccCcccCcCCChhHHHHHHhhccC-CCcccCC
Q psy4573         226 RIHTGQRPYVCEICGKGFTQKQALNTHKRGHTG-EIPYHCE  265 (306)
Q Consensus       226 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~~C~  265 (306)
                      ++|.++++|.|++|++.|.....|..|+++|.+ +++|.|+
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            5 SSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             cccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            344444444444444444444444444444444 4444443

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=9.7e-11  Score=69.61  Aligned_cols=38  Identities=45%  Similarity=0.802  Sum_probs=15.7

Q ss_pred             HccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccC
Q psy4573         227 IHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHC  264 (306)
Q Consensus       227 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C  264 (306)
                      +|+++++|.|++|++.|.....|..|+++|.++++|.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2yto_A            6 SGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP   43 (46)
T ss_dssp             CCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTT
T ss_pred             ccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCC
Confidence            33344444444444444444444444444444444443

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.98  E-value=1.6e-10  Score=68.65  Aligned_cols=44  Identities=36%  Similarity=0.591  Sum_probs=38.7

Q ss_pred             HHHhhccCCCCcccCcCCCccCCcHHHHHHHHHccCCCCcccCc
Q psy4573         195 LHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEI  238 (306)
Q Consensus       195 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  238 (306)
                      .|+++|.++++|.|.+|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            36778888999999999999999999999999999999999864

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.98  E-value=1.2e-10  Score=68.41  Aligned_cols=40  Identities=18%  Similarity=0.333  Sum_probs=19.5

Q ss_pred             HHHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccC
Q psy4573         225 IRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHC  264 (306)
Q Consensus       225 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C  264 (306)
                      +++|.++++|.|++|++.|.....|..|++.|.++++|.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2emb_A            4 GSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSS   43 (44)
T ss_dssp             CSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTC
T ss_pred             ccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCC
Confidence            3344444445555555555555555555444444444444

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.98  E-value=1.6e-10  Score=67.18  Aligned_cols=42  Identities=29%  Similarity=0.565  Sum_probs=39.8

Q ss_pred             HHhhccCCCcccCCcchHhhcChHHHHHHhhhcCCCCCCCcc
Q psy4573         252 HKRGHTGEIPYHCEFCSERFSTKALVRHHVRSHHSSARLGLN  293 (306)
Q Consensus       252 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~  293 (306)
                      |+++|.++++|.|.+|+++|.....|..|+++|+++.+|.|+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            577899999999999999999999999999999999999984

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=8.5e-11  Score=69.86  Aligned_cols=37  Identities=43%  Similarity=0.749  Sum_probs=14.6

Q ss_pred             ccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccC
Q psy4573         228 HTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHC  264 (306)
Q Consensus       228 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C  264 (306)
                      |+++++|.|++|++.|.....|..|++.|.++++|.|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2eoz_A            7 GTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGP   43 (46)
T ss_dssp             CSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSC
T ss_pred             CCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            3333333343344333333333333333333333333

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.98  E-value=1.6e-10  Score=68.68  Aligned_cols=43  Identities=35%  Similarity=0.558  Sum_probs=38.1

Q ss_pred             HHhhccCCCCcccCcCCCccCCcHHHHHHHHHccCCCCcccCc
Q psy4573         196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEI  238 (306)
Q Consensus       196 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  238 (306)
                      |+++|.++++|.|.+|++.|.....|..|+++|++++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             SCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             CccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            6778888999999999999999999999999999999999864

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.98  E-value=3.1e-10  Score=66.99  Aligned_cols=42  Identities=31%  Similarity=0.608  Sum_probs=32.9

Q ss_pred             hccCCCCcccCcCCCccCCcHHHHHHHHHccCCCCcccCccc
Q psy4573         199 THTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEICG  240 (306)
Q Consensus       199 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~  240 (306)
                      .|+++++|.|.+|++.|.....|..|+++|+++++|.|++||
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            4 GSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            466777888888888888888888888888888888887775

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=9.9e-11  Score=69.56  Aligned_cols=41  Identities=34%  Similarity=0.600  Sum_probs=21.1

Q ss_pred             HHHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCC
Q psy4573         225 IRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCE  265 (306)
Q Consensus       225 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~  265 (306)
                      +++|.++++|.|++|++.|.....|..|+++|.++++|.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            4 GSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            34445555555555555555555555555555555555553

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.2e-10  Score=69.13  Aligned_cols=41  Identities=39%  Similarity=0.711  Sum_probs=20.0

Q ss_pred             HHHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCC
Q psy4573         225 IRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCE  265 (306)
Q Consensus       225 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~  265 (306)
                      +++|+++++|.|++|++.|.....|..|++.|.++++|.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            4 GSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             CCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             ccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            33444444555555555555555555555444444444443

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.9e-10  Score=68.33  Aligned_cols=44  Identities=30%  Similarity=0.521  Sum_probs=38.6

Q ss_pred             HHHhhccCCCCcccCcCCCccCCcHHHHHHHHHccCCCCcccCc
Q psy4573         195 LHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEI  238 (306)
Q Consensus       195 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  238 (306)
                      .|+++|.++++|.|.+|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            36778888999999999999999999999999999999999864

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.97  E-value=1.2e-10  Score=67.64  Aligned_cols=38  Identities=37%  Similarity=0.723  Sum_probs=18.0

Q ss_pred             HccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccC
Q psy4573         227 IHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHC  264 (306)
Q Consensus       227 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C  264 (306)
                      +|.++++|.|++|++.|.....|..|+++|.++++|.|
T Consensus         5 ~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            5 SSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             cCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            34444444444444444444444444444444444443

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=2e-10  Score=68.23  Aligned_cols=44  Identities=34%  Similarity=0.541  Sum_probs=38.6

Q ss_pred             HHHhhccCCCCcccCcCCCccCCcHHHHHHHHHccCCCCcccCc
Q psy4573         195 LHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEI  238 (306)
Q Consensus       195 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  238 (306)
                      +|+++|.++++|.|.+|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            36778888999999999999999999999999999999998864

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=2.3e-10  Score=67.89  Aligned_cols=44  Identities=39%  Similarity=0.571  Sum_probs=38.9

Q ss_pred             HHHhhccCCCCcccCcCCCccCCcHHHHHHHHHccCCCCcccCc
Q psy4573         195 LHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEI  238 (306)
Q Consensus       195 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  238 (306)
                      +|+++|.++++|.|.+|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            36778889999999999999999999999999999999999864

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=1.8e-10  Score=68.38  Aligned_cols=40  Identities=38%  Similarity=0.806  Sum_probs=20.0

Q ss_pred             HHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCC
Q psy4573         226 RIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCE  265 (306)
Q Consensus       226 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~  265 (306)
                      ++|+++++|.|++|++.|.....|..|++.|.++++|.|+
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            5 SSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            3444445555555555555555555555555555555443

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=1.9e-10  Score=68.28  Aligned_cols=44  Identities=32%  Similarity=0.540  Sum_probs=38.6

Q ss_pred             HHHhhccCCCCcccCcCCCccCCcHHHHHHHHHccCCCCcccCc
Q psy4573         195 LHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEI  238 (306)
Q Consensus       195 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  238 (306)
                      +|+++|.++++|.|.+|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            36778888999999999999999999999999999999999864

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=9.2e-11  Score=68.21  Aligned_cols=39  Identities=38%  Similarity=0.647  Sum_probs=20.4

Q ss_pred             HHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccC
Q psy4573         226 RIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHC  264 (306)
Q Consensus       226 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C  264 (306)
                      ++|+++++|.|++|++.|.....|..|++.|.++++|.|
T Consensus         4 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            4 GSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             cccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            344555555555555555555555555555555555544

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2.8e-10  Score=67.59  Aligned_cols=42  Identities=29%  Similarity=0.474  Sum_probs=37.8

Q ss_pred             HHhhccCCCCcccCcCCCccCCcHHHHHHHHHccCCCCcccC
Q psy4573         196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCE  237 (306)
Q Consensus       196 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  237 (306)
                      |+++|.++++|.|.+|++.|.....|..|+++|+++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            667888899999999999999999999999999999999986

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=1.9e-10  Score=68.26  Aligned_cols=44  Identities=39%  Similarity=0.610  Sum_probs=38.9

Q ss_pred             HHHhhccCCCCcccCcCCCccCCcHHHHHHHHHccCCCCcccCc
Q psy4573         195 LHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEI  238 (306)
Q Consensus       195 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  238 (306)
                      .|+++|.++++|.|.+|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CCCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            36778889999999999999999999999999999999999864

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2.1e-10  Score=68.06  Aligned_cols=44  Identities=34%  Similarity=0.545  Sum_probs=38.6

Q ss_pred             HHHhhccCCCCcccCcCCCccCCcHHHHHHHHHccCCCCcccCc
Q psy4573         195 LHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEI  238 (306)
Q Consensus       195 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  238 (306)
                      +|+++|.++++|.|.+|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CCCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            36778888999999999999999999999999999999999864

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.96  E-value=1.9e-10  Score=67.56  Aligned_cols=40  Identities=25%  Similarity=0.326  Sum_probs=21.5

Q ss_pred             HHHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccC
Q psy4573         225 IRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHC  264 (306)
Q Consensus       225 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C  264 (306)
                      +++|.++++|.|++|++.|.....|..|+++|.++++|.|
T Consensus         4 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (44)
T 2eou_A            4 GSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSS   43 (44)
T ss_dssp             SCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCC
T ss_pred             CCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCC
Confidence            3445555555555555555555555555555555555554

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.96  E-value=3.3e-10  Score=67.94  Aligned_cols=40  Identities=30%  Similarity=0.589  Sum_probs=22.2

Q ss_pred             cCCCCcccCcCCCccCCcHHHHHHHHHccCCCCcccCccc
Q psy4573         201 TNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEICG  240 (306)
Q Consensus       201 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~  240 (306)
                      .++++|.|.+|++.|.....|..|+++|+++++|.|++|+
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~   47 (48)
T 2epr_A            8 RTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS   47 (48)
T ss_dssp             CCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCC
T ss_pred             CCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCC
Confidence            3445555555555555555555555555555555555554

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=2.4e-10  Score=67.84  Aligned_cols=43  Identities=30%  Similarity=0.529  Sum_probs=38.0

Q ss_pred             HHhhccCCCCcccCcCCCccCCcHHHHHHHHHccCCCCcccCc
Q psy4573         196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEI  238 (306)
Q Consensus       196 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  238 (306)
                      |+++|.++++|.|.+|++.|.....|..|+++|++++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             CccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            6678888999999999999999999999999999999998864

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=1.6e-10  Score=68.59  Aligned_cols=44  Identities=27%  Similarity=0.449  Sum_probs=41.4

Q ss_pred             HHHhhccCCCcccCCcchHhhcChHHHHHHhhhcCCCCCCCccc
Q psy4573         251 THKRGHTGEIPYHCEFCSERFSTKALVRHHVRSHHSSARLGLNL  294 (306)
Q Consensus       251 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~  294 (306)
                      .|++.|.++++|.|.+|++.|.....|..|+++|+++.+|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             CcccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47889999999999999999999999999999999999999964

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=2.8e-10  Score=67.53  Aligned_cols=43  Identities=30%  Similarity=0.481  Sum_probs=38.2

Q ss_pred             HHhhccCCCCcccCcCCCccCCcHHHHHHHHHccCCCCcccCc
Q psy4573         196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEI  238 (306)
Q Consensus       196 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  238 (306)
                      |+++|.++++|.|.+|++.|.....|..|+++|++++||.|++
T Consensus         3 h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            6678888999999999999999999999999999999999864

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=2e-10  Score=68.16  Aligned_cols=42  Identities=43%  Similarity=0.699  Sum_probs=32.5

Q ss_pred             hhccCCCCcccCcCCCccCCcHHHHHHHHHccCCCCcccCcc
Q psy4573         198 RTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEIC  239 (306)
Q Consensus       198 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  239 (306)
                      ++|.++++|.|.+|++.|.....|..|+++|+++++|+|++|
T Consensus         5 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            5 SSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            456777778888888888888888888777877778887766

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.95  E-value=4.3e-11  Score=76.19  Aligned_cols=54  Identities=17%  Similarity=0.292  Sum_probs=48.5

Q ss_pred             HHHHHhhccCCCcccCCcchHhhcChHHHHHHhhhcCCCCCCCcccccccchhhccC
Q psy4573         249 LNTHKRGHTGEIPYHCEFCSERFSTKALVRHHVRSHHSSARLGLNLLDHELSMITSK  305 (306)
Q Consensus       249 L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~c~~~~~~~~~~  305 (306)
                      |..|++.|.++++|.|+.|+++|.....|.   +.|.++.+|.|..|++.|....+.
T Consensus         2 L~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~   55 (62)
T 1vd4_A            2 IETDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESA   55 (62)
T ss_dssp             CCCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTC
T ss_pred             hhhHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCccc
Confidence            456889999999999999999999988887   789999999999999999887664

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=2.1e-10  Score=68.06  Aligned_cols=44  Identities=27%  Similarity=0.509  Sum_probs=41.4

Q ss_pred             HHHhhccCCCcccCCcchHhhcChHHHHHHhhhcCCCCCCCccc
Q psy4573         251 THKRGHTGEIPYHCEFCSERFSTKALVRHHVRSHHSSARLGLNL  294 (306)
Q Consensus       251 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~  294 (306)
                      +|++.|.++++|.|.+|+++|.....|..|+++|+++.+|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            47889999999999999999999999999999999999999964

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=2.6e-10  Score=67.71  Aligned_cols=44  Identities=27%  Similarity=0.579  Sum_probs=41.3

Q ss_pred             HHHhhccCCCcccCCcchHhhcChHHHHHHhhhcCCCCCCCccc
Q psy4573         251 THKRGHTGEIPYHCEFCSERFSTKALVRHHVRSHHSSARLGLNL  294 (306)
Q Consensus       251 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~  294 (306)
                      .|++.|.++++|.|.+|++.|.....|..|+++|+++.+|.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            47889999999999999999999999999999999999999963

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=2.3e-10  Score=67.20  Aligned_cols=40  Identities=35%  Similarity=0.602  Sum_probs=19.7

Q ss_pred             HHHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccC
Q psy4573         225 IRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHC  264 (306)
Q Consensus       225 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C  264 (306)
                      +++|+++++|.|.+|++.|.....|..|++.|.++++|.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            4 GSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            3444444555555555555555555555555555544444

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=2.7e-10  Score=67.61  Aligned_cols=42  Identities=33%  Similarity=0.500  Sum_probs=34.9

Q ss_pred             hhccCCCCcccCcCCCccCCcHHHHHHHHHccCCCCcccCcc
Q psy4573         198 RTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEIC  239 (306)
Q Consensus       198 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  239 (306)
                      ++|.++++|.|.+|++.|.....|..|+++|+++++|.|++|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            5 SSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            457788888888888888888888888888888888888876

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=1.1e-10  Score=69.32  Aligned_cols=39  Identities=31%  Similarity=0.558  Sum_probs=17.4

Q ss_pred             HHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccC
Q psy4573         226 RIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHC  264 (306)
Q Consensus       226 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C  264 (306)
                      ++|+++++|.|++|++.|.....|..|+++|.++++|.|
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2en3_A            5 SSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP   43 (46)
T ss_dssp             CCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSC
T ss_pred             cccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            334444444444444444444444444444444444444

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.93  E-value=3.6e-10  Score=66.38  Aligned_cols=43  Identities=23%  Similarity=0.359  Sum_probs=38.3

Q ss_pred             HHHhhccCCCCcccCcCCCccCCcHHHHHHHHHccCCCCcccC
Q psy4573         195 LHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCE  237 (306)
Q Consensus       195 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  237 (306)
                      +|+++|.+++||.|.+|++.|.....|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            3677888999999999999999999999999999999999884

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=2.4e-10  Score=67.81  Aligned_cols=44  Identities=25%  Similarity=0.461  Sum_probs=41.3

Q ss_pred             HHHhhccCCCcccCCcchHhhcChHHHHHHhhhcCCCCCCCccc
Q psy4573         251 THKRGHTGEIPYHCEFCSERFSTKALVRHHVRSHHSSARLGLNL  294 (306)
Q Consensus       251 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~  294 (306)
                      .|++.|.++++|.|.+|++.|.....|..|+++|+++.+|.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47889999999999999999999999999999999999999964

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=2.9e-10  Score=67.44  Aligned_cols=44  Identities=25%  Similarity=0.423  Sum_probs=41.3

Q ss_pred             HHHhhccCCCcccCCcchHhhcChHHHHHHhhhcCCCCCCCccc
Q psy4573         251 THKRGHTGEIPYHCEFCSERFSTKALVRHHVRSHHSSARLGLNL  294 (306)
Q Consensus       251 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~  294 (306)
                      .|++.|.++++|.|.+|++.|.....|..|++.|+++.+|.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47889999999999999999999999999999999999999964

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=3e-10  Score=67.39  Aligned_cols=44  Identities=27%  Similarity=0.452  Sum_probs=41.3

Q ss_pred             HHHhhccCCCcccCCcchHhhcChHHHHHHhhhcCCCCCCCccc
Q psy4573         251 THKRGHTGEIPYHCEFCSERFSTKALVRHHVRSHHSSARLGLNL  294 (306)
Q Consensus       251 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~  294 (306)
                      .|++.|.++++|.|.+|++.|.....|..|++.|+++.+|.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             CCCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            47889999999999999999999999999999999999999964

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=2.9e-10  Score=67.49  Aligned_cols=44  Identities=30%  Similarity=0.520  Sum_probs=41.3

Q ss_pred             HHHhhccCCCcccCCcchHhhcChHHHHHHhhhcCCCCCCCccc
Q psy4573         251 THKRGHTGEIPYHCEFCSERFSTKALVRHHVRSHHSSARLGLNL  294 (306)
Q Consensus       251 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~  294 (306)
                      .|++.|.++++|.|.+|+++|.....|..|+++|+++.+|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47889999999999999999999999999999999999999964

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=3.3e-10  Score=67.26  Aligned_cols=43  Identities=37%  Similarity=0.529  Sum_probs=38.3

Q ss_pred             HHHhhccCCCCcccCcCCCccCCcHHHHHHHHHccCCCCcccC
Q psy4573         195 LHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCE  237 (306)
Q Consensus       195 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  237 (306)
                      +|+++|.++++|.|.+|++.|.....|..|+++|+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            4677888899999999999999999999999999999999886

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=2.5e-10  Score=67.76  Aligned_cols=44  Identities=30%  Similarity=0.511  Sum_probs=41.3

Q ss_pred             HHHhhccCCCcccCCcchHhhcChHHHHHHhhhcCCCCCCCccc
Q psy4573         251 THKRGHTGEIPYHCEFCSERFSTKALVRHHVRSHHSSARLGLNL  294 (306)
Q Consensus       251 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~  294 (306)
                      .|+++|.++++|.|.+|++.|.....|..|++.|+++.+|.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            47889999999999999999999999999999999999999964

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.92  E-value=6.3e-10  Score=64.95  Aligned_cols=38  Identities=16%  Similarity=0.408  Sum_probs=21.5

Q ss_pred             ccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCC
Q psy4573         228 HTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCE  265 (306)
Q Consensus       228 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~  265 (306)
                      |+++++|.|.+|++.|.....|..|++.|.++++|.|+
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   42 (43)
T 2yrm_A            5 SSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSS   42 (43)
T ss_dssp             CSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSC
T ss_pred             cCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCC
Confidence            45555555555555555555555555555555555554

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=1.1e-10  Score=68.65  Aligned_cols=39  Identities=31%  Similarity=0.490  Sum_probs=17.0

Q ss_pred             HHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccC
Q psy4573         226 RIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHC  264 (306)
Q Consensus       226 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C  264 (306)
                      ++|.++++|.|++|++.|.....|..|+++|.++++|.|
T Consensus         5 ~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eox_A            5 SSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS   43 (44)
T ss_dssp             CCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred             cCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            334444444444444444444444444444444444443

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=2.2e-10  Score=66.53  Aligned_cols=42  Identities=31%  Similarity=0.540  Sum_probs=39.7

Q ss_pred             HHHhhccCCCcccCCcchHhhcChHHHHHHhhhcCCCCCCCc
Q psy4573         251 THKRGHTGEIPYHCEFCSERFSTKALVRHHVRSHHSSARLGL  292 (306)
Q Consensus       251 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C  292 (306)
                      .|+++|.++++|.|++|+++|.....|..|+++|+++.+|.|
T Consensus         1 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            1 GSSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CCccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            378899999999999999999999999999999999999987

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=2.1e-10  Score=68.12  Aligned_cols=44  Identities=30%  Similarity=0.572  Sum_probs=41.3

Q ss_pred             HHHhhccCCCcccCCcchHhhcChHHHHHHhhhcCCCCCCCccc
Q psy4573         251 THKRGHTGEIPYHCEFCSERFSTKALVRHHVRSHHSSARLGLNL  294 (306)
Q Consensus       251 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~  294 (306)
                      +|++.|.++++|.|.+|++.|.....|..|+++|+++.+|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPSS   45 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCCC
T ss_pred             CccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47889999999999999999999999999999999999999963

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=2.5e-10  Score=67.75  Aligned_cols=44  Identities=32%  Similarity=0.545  Sum_probs=41.3

Q ss_pred             HHHhhccCCCcccCCcchHhhcChHHHHHHhhhcCCCCCCCccc
Q psy4573         251 THKRGHTGEIPYHCEFCSERFSTKALVRHHVRSHHSSARLGLNL  294 (306)
Q Consensus       251 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~  294 (306)
                      .|++.|.++++|.|.+|++.|.....|..|++.|+++.+|.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred             CCccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            47889999999999999999999999999999999999999964

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=3.4e-10  Score=67.21  Aligned_cols=43  Identities=26%  Similarity=0.510  Sum_probs=40.6

Q ss_pred             HHhhccCCCcccCCcchHhhcChHHHHHHhhhcCCCCCCCccc
Q psy4573         252 HKRGHTGEIPYHCEFCSERFSTKALVRHHVRSHHSSARLGLNL  294 (306)
Q Consensus       252 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~  294 (306)
                      |++.|.++++|.|.+|++.|.....|..|+++|+++.+|.|+.
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            6788999999999999999999999999999999999999964

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=2.7e-10  Score=66.89  Aligned_cols=43  Identities=30%  Similarity=0.539  Sum_probs=40.6

Q ss_pred             HHHhhccCCCcccCCcchHhhcChHHHHHHhhhcCCCCCCCcc
Q psy4573         251 THKRGHTGEIPYHCEFCSERFSTKALVRHHVRSHHSSARLGLN  293 (306)
Q Consensus       251 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~  293 (306)
                      .|++.|.++++|.|.+|+++|.....|..|+++|+++.+|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            4788999999999999999999999999999999999999984

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.92  E-value=1.7e-10  Score=71.13  Aligned_cols=52  Identities=15%  Similarity=0.223  Sum_probs=48.3

Q ss_pred             cCcCCChhHHHHHHhhccCCCcccCCcchHhhcChHHHHHHhhhcCCCCCCC
Q psy4573         240 GKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTKALVRHHVRSHHSSARLG  291 (306)
Q Consensus       240 ~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  291 (306)
                      ++.|.....|..|++.|.++++|.|.+|+++|.....|..|+++|+++.+|.
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCCC
Confidence            4678899999999999999999999999999999999999999999988763

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.91  E-value=3.2e-10  Score=67.32  Aligned_cols=43  Identities=28%  Similarity=0.326  Sum_probs=37.3

Q ss_pred             HHhhccCCCCcccCcCCCccCCcHHHHHHHHHccC-CCCcccCc
Q psy4573         196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTG-QRPYVCEI  238 (306)
Q Consensus       196 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~  238 (306)
                      |+++|.++++|.|.+|++.|.....|..|+++|++ +++|.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~~   46 (46)
T 2eoy_A            3 SGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSCC
T ss_pred             CccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56778888899999999999999999999999988 88998864

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=3.8e-10  Score=66.20  Aligned_cols=43  Identities=26%  Similarity=0.491  Sum_probs=40.6

Q ss_pred             HHHhhccCCCcccCCcchHhhcChHHHHHHhhhcCCCCCCCcc
Q psy4573         251 THKRGHTGEIPYHCEFCSERFSTKALVRHHVRSHHSSARLGLN  293 (306)
Q Consensus       251 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~  293 (306)
                      .|+++|.++++|.|.+|++.|.....|..|++.|+++.+|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            4788999999999999999999999999999999999999984

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=3e-10  Score=66.70  Aligned_cols=43  Identities=28%  Similarity=0.481  Sum_probs=40.6

Q ss_pred             HHHhhccCCCcccCCcchHhhcChHHHHHHhhhcCCCCCCCcc
Q psy4573         251 THKRGHTGEIPYHCEFCSERFSTKALVRHHVRSHHSSARLGLN  293 (306)
Q Consensus       251 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~  293 (306)
                      .|+++|.++++|.|.+|+++|.....|..|++.|+++.+|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             CSCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CCccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            4788999999999999999999999999999999999999984

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=3.3e-10  Score=67.22  Aligned_cols=43  Identities=33%  Similarity=0.607  Sum_probs=38.6

Q ss_pred             HHHhhccCCCCcccCcCCCccCCcHHHHHHHHHccCCCCcccC
Q psy4573         195 LHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCE  237 (306)
Q Consensus       195 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  237 (306)
                      +|+++|.++++|.|.+|++.|.....|..|+++|+++++|.|+
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            3677888999999999999999999999999999999999986

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.90  E-value=4.7e-10  Score=65.07  Aligned_cols=41  Identities=27%  Similarity=0.487  Sum_probs=34.8

Q ss_pred             HHhhccCCCCcccCcCCCccCCcHHHHHHHHHccCCCCccc
Q psy4573         196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVC  236 (306)
Q Consensus       196 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  236 (306)
                      |+++|.++++|.|.+|++.|...+.|..|+++|++++||.|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            45678888888888888888888888888888888888877

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.90  E-value=4e-10  Score=65.44  Aligned_cols=41  Identities=32%  Similarity=0.592  Sum_probs=39.1

Q ss_pred             HHhhccCCCcccCCcchHhhcChHHHHHHhhhcCCCCCCCc
Q psy4573         252 HKRGHTGEIPYHCEFCSERFSTKALVRHHVRSHHSSARLGL  292 (306)
Q Consensus       252 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C  292 (306)
                      |++.|.++++|.|.+|+++|...+.|..|++.|+++.+|.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            67889999999999999999999999999999999999987

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=3.7e-10  Score=67.65  Aligned_cols=41  Identities=32%  Similarity=0.649  Sum_probs=22.2

Q ss_pred             HccCCCCcccC--cccCcCCChhHHHHHHhhccCCCcccCCcc
Q psy4573         227 IHTGQRPYVCE--ICGKGFTQKQALNTHKRGHTGEIPYHCEFC  267 (306)
Q Consensus       227 ~h~~~~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  267 (306)
                      +|+++++|.|.  +|++.|.....|..|+++|.++++|.|.+|
T Consensus         6 ~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            6 SGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             SSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34555555554  455555555555555555555555555544

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.89  E-value=4e-10  Score=66.16  Aligned_cols=43  Identities=14%  Similarity=0.329  Sum_probs=40.6

Q ss_pred             HHHhhccCCCcccCCcchHhhcChHHHHHHhhhcCCCCCCCcc
Q psy4573         251 THKRGHTGEIPYHCEFCSERFSTKALVRHHVRSHHSSARLGLN  293 (306)
Q Consensus       251 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~  293 (306)
                      .|++.|.++++|.|.+|+++|.....|..|++.|.++.+|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            4788999999999999999999999999999999999999984

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=3.5e-10  Score=67.10  Aligned_cols=44  Identities=27%  Similarity=0.515  Sum_probs=41.2

Q ss_pred             HHHhhccCCCcccCCcchHhhcChHHHHHHhhhcCCCCCCCccc
Q psy4573         251 THKRGHTGEIPYHCEFCSERFSTKALVRHHVRSHHSSARLGLNL  294 (306)
Q Consensus       251 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~  294 (306)
                      .|++.|.++++|.|.+|++.|.....|..|++.|+++.+|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSCC
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47889999999999999999999999999999999999999963

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.88  E-value=1.1e-09  Score=64.99  Aligned_cols=38  Identities=39%  Similarity=0.558  Sum_probs=19.1

Q ss_pred             ccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCC
Q psy4573         228 HTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCE  265 (306)
Q Consensus       228 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~  265 (306)
                      |.++++|.|++|++.|.....|..|++.|.++++|.|.
T Consensus         7 h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            7 GHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            44444555555555555555555555555555555443

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=5.7e-10  Score=66.18  Aligned_cols=43  Identities=33%  Similarity=0.597  Sum_probs=40.3

Q ss_pred             HHhhccCCCcccCCcchHhhcChHHHHHHhhhcCCCCCCCccc
Q psy4573         252 HKRGHTGEIPYHCEFCSERFSTKALVRHHVRSHHSSARLGLNL  294 (306)
Q Consensus       252 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~  294 (306)
                      |++.|.++++|.|.+|++.|.....|..|++.|+++.+|.|..
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            6778999999999999999999999999999999999999863

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=3.5e-10  Score=65.67  Aligned_cols=41  Identities=32%  Similarity=0.556  Sum_probs=35.5

Q ss_pred             HHhhccCCCCcccCcCCCccCCcHHHHHHHHHccCCCCccc
Q psy4573         196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVC  236 (306)
Q Consensus       196 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  236 (306)
                      |+++|.++++|.|..|++.|.....|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            56678888899999999999999999999888988888877

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.88  E-value=7.4e-10  Score=64.98  Aligned_cols=42  Identities=26%  Similarity=0.447  Sum_probs=35.9

Q ss_pred             HHhhccCCCCcccCcCCCccCCcHHHHHHHHHccCCCCcccC
Q psy4573         196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCE  237 (306)
Q Consensus       196 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  237 (306)
                      |+++|.++++|.|.+|++.|.....|..|+++|+++++|+|+
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            456788888899999999999999999999889888888884

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.87  E-value=9.4e-10  Score=63.42  Aligned_cols=37  Identities=49%  Similarity=0.804  Sum_probs=20.9

Q ss_pred             ccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccC
Q psy4573         228 HTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHC  264 (306)
Q Consensus       228 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C  264 (306)
                      |+++++|.|++|++.|.....|..|+++|.++++|.|
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            5 SSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             CCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             cCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            4555555555555555555555555555555555554

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=4.2e-10  Score=66.75  Aligned_cols=43  Identities=28%  Similarity=0.431  Sum_probs=38.6

Q ss_pred             HHHhhccCCCCcccCcCCCccCCcHHHHHHHHHccCCCCcccC
Q psy4573         195 LHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCE  237 (306)
Q Consensus       195 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  237 (306)
                      +|+++|+++++|.|.+|++.|.....|..|+++|+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            3677888999999999999999999999999999999999985

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.84  E-value=2.4e-09  Score=62.38  Aligned_cols=40  Identities=13%  Similarity=0.193  Sum_probs=32.1

Q ss_pred             hccCCCCcccCcCCCccCCcHHHHHHHHHccCCCCcccCc
Q psy4573         199 THTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEI  238 (306)
Q Consensus       199 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  238 (306)
                      .|+++++|.|..|++.|.....|..|+++|++++||.|++
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   43 (43)
T 2yrm_A            4 GSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSSG   43 (43)
T ss_dssp             CCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSCC
T ss_pred             CcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCCC
Confidence            4677788888888888888888888888888888888764

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=1e-09  Score=65.61  Aligned_cols=43  Identities=35%  Similarity=0.571  Sum_probs=33.5

Q ss_pred             HhhccCCCCcccC--cCCCccCCcHHHHHHHHHccCCCCcccCcc
Q psy4573         197 MRTHTNERPAVCS--YCGKGFRRGDALTEHIRIHTGQRPYVCEIC  239 (306)
Q Consensus       197 ~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  239 (306)
                      .++|.++++|.|.  .|++.|.....|..|+++|++++||+|.+|
T Consensus         4 ~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            4 GSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3457777888887  788888888888888888888888888776

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=4.8e-10  Score=65.80  Aligned_cols=43  Identities=16%  Similarity=0.325  Sum_probs=40.5

Q ss_pred             HHHhhccCCCcccCCcchHhhcChHHHHHHhhhcCCCCCCCcc
Q psy4573         251 THKRGHTGEIPYHCEFCSERFSTKALVRHHVRSHHSSARLGLN  293 (306)
Q Consensus       251 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~  293 (306)
                      .|+++|.++++|.|.+|++.|.....|..|+++|+++.+|.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            4788999999999999999999999999999999999999983

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1.3e-09  Score=64.26  Aligned_cols=37  Identities=49%  Similarity=0.786  Sum_probs=17.8

Q ss_pred             ccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccC
Q psy4573         228 HTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHC  264 (306)
Q Consensus       228 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C  264 (306)
                      |.++++|.|.+|++.|.....|..|+++|.++++|.|
T Consensus         7 h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (45)
T 2epu_A            7 GTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS   43 (45)
T ss_dssp             CCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCS
T ss_pred             CCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCC
Confidence            4444444444444444444444444444444444444

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1.2e-09  Score=64.05  Aligned_cols=43  Identities=28%  Similarity=0.499  Sum_probs=40.2

Q ss_pred             HHHhhccCCCcccCCcchHhhcChHHHHHHhhhcCCCCCCCcc
Q psy4573         251 THKRGHTGEIPYHCEFCSERFSTKALVRHHVRSHHSSARLGLN  293 (306)
Q Consensus       251 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~  293 (306)
                      .|+++|.++++|.|.+|++.|.....|..|+++|+++.+|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~g   44 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCCC
T ss_pred             CCCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCCC
Confidence            4788999999999999999999999999999999999999873

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.81  E-value=2.5e-09  Score=63.31  Aligned_cols=40  Identities=38%  Similarity=0.603  Sum_probs=32.7

Q ss_pred             hhccCCCCcccCcCCCccCCcHHHHHHHHHccCCCCcccC
Q psy4573         198 RTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCE  237 (306)
Q Consensus       198 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  237 (306)
                      +.|.++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            5 SSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            4577788888888888888888888888888888888885

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.79  E-value=2.5e-10  Score=75.50  Aligned_cols=61  Identities=30%  Similarity=0.365  Sum_probs=29.2

Q ss_pred             HHHhhccCCCCcccCcCCCccCCcHHHHHHHHHccCCCCcccCcccCcCCChhHHHHHHhhccC
Q psy4573         195 LHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTG  258 (306)
Q Consensus       195 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  258 (306)
                      .|+.+|.+++++.|..|+..|. ...|..|+ .+.++++|.|+.|++.|. ...|..|+++|.+
T Consensus         7 ~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~   67 (75)
T 2d9k_A            7 GHEETECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEVCGR   67 (75)
T ss_dssp             CCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHHBTT
T ss_pred             hhCcccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHHccC
Confidence            3444444455555555555552 44455554 444455555555554433 3444455444443

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.78  E-value=1.3e-10  Score=76.95  Aligned_cols=67  Identities=16%  Similarity=0.238  Sum_probs=59.2

Q ss_pred             HHHHHHHHHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCCcchHhhcChHHHHHHhhhcCCCC
Q psy4573         219 DALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTKALVRHHVRSHHSSA  288 (306)
Q Consensus       219 ~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  288 (306)
                      ..|..|+.++.+.+++.|..|++.| ....|..|+ .|.++++|.|+.|++.|. ...|..|++++.+..
T Consensus         3 ~~L~~H~~~~c~~r~~~C~~C~~~~-~~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~~   69 (75)
T 2d9k_A            3 SGSSGHEETECPLRLAVCQHCDLEL-SILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEVCGREG   69 (75)
T ss_dssp             CCCSCCCCCCCCCCCEECSSSCCEE-CHHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHHBTTBS
T ss_pred             hHHHhhCcccCCCcccCCcccChHh-hHHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHHccCCc
Confidence            3466788889999999999999999 499999999 899999999999999987 589999999877653

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=1.6e-09  Score=63.88  Aligned_cols=42  Identities=24%  Similarity=0.420  Sum_probs=39.1

Q ss_pred             HhhccCCCcccCCcchHhhcChHHHHHHhhhcCCCCCCCccc
Q psy4573         253 KRGHTGEIPYHCEFCSERFSTKALVRHHVRSHHSSARLGLNL  294 (306)
Q Consensus       253 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~  294 (306)
                      .+.|.++++|.|.+|++.|.....|..|+++|+++.+|.|++
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (45)
T 2epu_A            4 GSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSSG   45 (45)
T ss_dssp             CCCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSCC
T ss_pred             CCCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCCC
Confidence            467899999999999999999999999999999999999964

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.74  E-value=5e-09  Score=60.29  Aligned_cols=39  Identities=28%  Similarity=0.506  Sum_probs=36.9

Q ss_pred             hhccCCCcccCCcchHhhcChHHHHHHhhhcCCCCCCCc
Q psy4573         254 RGHTGEIPYHCEFCSERFSTKALVRHHVRSHHSSARLGL  292 (306)
Q Consensus       254 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C  292 (306)
                      +.|.++++|.|++|++.|.....|..|++.|+++.+|.|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            468899999999999999999999999999999999987

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.65  E-value=1.5e-08  Score=57.53  Aligned_cols=35  Identities=29%  Similarity=0.486  Sum_probs=18.4

Q ss_pred             cCCCCcccCcccCcCCChhHHHHHHhhccCCCccc
Q psy4573         229 TGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYH  263 (306)
Q Consensus       229 ~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~  263 (306)
                      +++++|.|.+|++.|...+.|..|+++|.++++|.
T Consensus         2 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   36 (39)
T 1njq_A            2 WPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARL   36 (39)
T ss_dssp             CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTT
T ss_pred             CCCCceECCCCCcccCCHHHHHHHHHHcCCCccce
Confidence            34455555555555555555555555555555543

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.61  E-value=1.2e-09  Score=74.45  Aligned_cols=56  Identities=16%  Similarity=0.296  Sum_probs=28.5

Q ss_pred             hccCCCCcccCcCCCccCCcHHHHHHHHHccCCCCcccCcccCcCCChhHHHHHHhhccC
Q psy4573         199 THTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTG  258 (306)
Q Consensus       199 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  258 (306)
                      +|+++++|.|.+|++.|.....|..|+++|++++||+|..|.    ....|..|++.|.+
T Consensus        19 ~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~----~~~~~~~~~~~~~~   74 (88)
T 1x6f_A           19 PRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQE----RRKQLLSKQKYADG   74 (88)
T ss_dssp             SCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCS----CCCCCCCCCCCCCC
T ss_pred             ccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhh----hHHHHHhhhccccc
Confidence            345555555555555555555555555555555555554332    23334444444443

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.61  E-value=1.4e-08  Score=56.77  Aligned_cols=32  Identities=31%  Similarity=0.744  Sum_probs=15.1

Q ss_pred             HHccCCCCcccCcccCcCCChhHHHHHHhhcc
Q psy4573         226 RIHTGQRPYVCEICGKGFTQKQALNTHKRGHT  257 (306)
Q Consensus       226 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~  257 (306)
                      ++|.+++||.|++|++.|.....|..|++.|.
T Consensus         4 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~   35 (37)
T 1p7a_A            4 RGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             STTCCSSSBCCTTTCCCBSSHHHHHHHHGGGT
T ss_pred             CcCCCCCCccCCCCCcccCcHHHHHHHHHHhc
Confidence            34444444444444444444444444444443

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.58  E-value=1.1e-09  Score=74.64  Aligned_cols=59  Identities=12%  Similarity=0.191  Sum_probs=50.0

Q ss_pred             HHHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCCcchHhhcChHHHHHHhhhcCCC
Q psy4573         225 IRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTKALVRHHVRSHHSS  287 (306)
Q Consensus       225 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  287 (306)
                      ..+|+++++|.|++|++.|.....|..|+++|.++++|.|..|.    ....|..|.+.+.+.
T Consensus        17 ~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~----~~~~~~~~~~~~~~~   75 (88)
T 1x6f_A           17 NGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQE----RRKQLLSKQKYADGA   75 (88)
T ss_dssp             CCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCS----CCCCCCCCCCCCCCS
T ss_pred             ccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhh----hHHHHHhhhcccccc
Confidence            45688999999999999999999999999999999999998765    455666777776653

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.56  E-value=3.6e-08  Score=54.27  Aligned_cols=33  Identities=33%  Similarity=0.636  Sum_probs=16.8

Q ss_pred             ccCCCCcccCcccCcCCChhHHHHHHhhccCCC
Q psy4573         228 HTGQRPYVCEICGKGFTQKQALNTHKRGHTGEI  260 (306)
Q Consensus       228 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~  260 (306)
                      |.++++|.|++|++.|.....|..|++.|++++
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~k   34 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHGAA   34 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSCTT
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcCCC
Confidence            344455555555555555555555555554443

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.56  E-value=4.4e-08  Score=55.50  Aligned_cols=37  Identities=30%  Similarity=0.596  Sum_probs=23.8

Q ss_pred             ccCCCCcccCcCCCccCCcHHHHHHHHHccCCCCccc
Q psy4573         200 HTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVC  236 (306)
Q Consensus       200 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  236 (306)
                      |.++++|.|.+|++.|...+.|..|+++|+++++|.+
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            3455666666666666666666666666666666654

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.56  E-value=1.7e-08  Score=56.42  Aligned_cols=32  Identities=25%  Similarity=0.670  Sum_probs=15.8

Q ss_pred             ccCCCCcccCcccCcCCChhHHHHHHhhccCC
Q psy4573         228 HTGQRPYVCEICGKGFTQKQALNTHKRGHTGE  259 (306)
Q Consensus       228 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~  259 (306)
                      |.++++|.|++|++.|.....|..|++.|+++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~   35 (37)
T 2elo_A            4 GSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPE   35 (37)
T ss_dssp             CCCCCCCEETTTTEECSSHHHHHHHHHHHCSS
T ss_pred             CCCCCCcCCCCCCCccCCHHHHHHHHHHHcCC
Confidence            44444555555555555555555555444444

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.55  E-value=2.2e-08  Score=55.97  Aligned_cols=36  Identities=31%  Similarity=0.576  Sum_probs=33.5

Q ss_pred             HHhhccCCCcccCCcchHhhcChHHHHHHhhhcCCC
Q psy4573         252 HKRGHTGEIPYHCEFCSERFSTKALVRHHVRSHHSS  287 (306)
Q Consensus       252 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  287 (306)
                      |++.|.++++|.|+.|++.|.....|..|++.|+++
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            678899999999999999999999999999998763

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.54  E-value=6.3e-08  Score=61.22  Aligned_cols=37  Identities=24%  Similarity=0.397  Sum_probs=18.0

Q ss_pred             cCCCCcccCc--CCCccCCcHHHHHHH-HHccCCCCcccC
Q psy4573         201 TNERPAVCSY--CGKGFRRGDALTEHI-RIHTGQRPYVCE  237 (306)
Q Consensus       201 ~~~~~~~C~~--C~~~f~~~~~l~~H~-~~h~~~~~~~C~  237 (306)
                      ++++||.|..  |++.|...+.|..|+ ++|++++||.|.
T Consensus        23 sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~   62 (73)
T 1x3c_A           23 SPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSA   62 (73)
T ss_dssp             CSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCC
T ss_pred             cCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCcccc
Confidence            3445555533  555555555555554 345555555443

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.54  E-value=4.8e-08  Score=53.80  Aligned_cols=33  Identities=39%  Similarity=0.794  Sum_probs=17.3

Q ss_pred             ccCCCCcccCcccCcCCChhHHHHHHhhccCCC
Q psy4573         228 HTGQRPYVCEICGKGFTQKQALNTHKRGHTGEI  260 (306)
Q Consensus       228 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~  260 (306)
                      |.++++|.|.+|++.|.....|..|++.|.+++
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~   34 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCC
Confidence            344555555555555555555555555555443

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.53  E-value=6.6e-08  Score=52.56  Aligned_cols=30  Identities=23%  Similarity=0.317  Sum_probs=17.5

Q ss_pred             CcccCcccCcCCChhHHHHHHhhccCCCcc
Q psy4573         233 PYVCEICGKGFTQKQALNTHKRGHTGEIPY  262 (306)
Q Consensus       233 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~  262 (306)
                      ||.|++|++.|.....|..|+++|.++++|
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~~~H~~~~~~   31 (33)
T 1rim_A            2 KFACPECPKRFMRSDHLSKHITLHELLGEE   31 (33)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTTTCCC
T ss_pred             cccCCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence            455555555555555555555555555554

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.46  E-value=4.9e-08  Score=54.50  Aligned_cols=36  Identities=22%  Similarity=0.638  Sum_probs=33.0

Q ss_pred             hhccCCCcccCCcchHhhcChHHHHHHhhhcCCCCC
Q psy4573         254 RGHTGEIPYHCEFCSERFSTKALVRHHVRSHHSSAR  289 (306)
Q Consensus       254 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~  289 (306)
                      +.|.++++|.|.+|+++|.....|..|++.|+++.+
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            568899999999999999999999999999998753

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.45  E-value=1.8e-07  Score=59.14  Aligned_cols=36  Identities=33%  Similarity=0.546  Sum_probs=17.8

Q ss_pred             cCCCCcccCc--ccCcCCChhHHHHHH-hhccCCCcccC
Q psy4573         229 TGQRPYVCEI--CGKGFTQKQALNTHK-RGHTGEIPYHC  264 (306)
Q Consensus       229 ~~~~~~~C~~--C~~~f~~~~~L~~H~-~~h~~~~~~~C  264 (306)
                      ++++||+|.+  |++.|...+.|..|+ ++|.+++||.|
T Consensus        23 sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~   61 (73)
T 1x3c_A           23 SPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFS   61 (73)
T ss_dssp             CSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCC
T ss_pred             cCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccc
Confidence            3445555533  555555555555554 34555555544

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.42  E-value=1.9e-07  Score=51.20  Aligned_cols=34  Identities=29%  Similarity=0.425  Sum_probs=24.0

Q ss_pred             ccCCCCcccCcCCCccCCcHHHHHHHHHccCCCC
Q psy4573         200 HTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRP  233 (306)
Q Consensus       200 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  233 (306)
                      |.++++|.|.+|++.|...+.|..|+++|++++|
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            5566777777777777777777777777766553

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.41  E-value=1.6e-07  Score=52.76  Aligned_cols=30  Identities=23%  Similarity=0.360  Sum_probs=15.6

Q ss_pred             cCCCCcccCc--ccCcCCChhHHHHHHhhccC
Q psy4573         229 TGQRPYVCEI--CGKGFTQKQALNTHKRGHTG  258 (306)
Q Consensus       229 ~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~  258 (306)
                      ++++||+|++  |++.|...+.|..|+++|.+
T Consensus         5 ~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg   36 (38)
T 2eln_A            5 SSGILLKCPTDGCDYSTPDKYKLQAHLKVHTA   36 (38)
T ss_dssp             SCCCCEECSSSSCCCEESCHHHHHHHHHHHSC
T ss_pred             CCCCCCCCCCCCCCCccCCHHHHHHHHHhcCC
Confidence            4455555543  55555555555555555544

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.40  E-value=2.3e-07  Score=50.30  Aligned_cols=31  Identities=32%  Similarity=0.493  Sum_probs=18.0

Q ss_pred             CcccCcCCCccCCcHHHHHHHHHccCCCCcc
Q psy4573         205 PAVCSYCGKGFRRGDALTEHIRIHTGQRPYV  235 (306)
Q Consensus       205 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  235 (306)
                      ||.|.+|++.|...+.|..|+++|+++++|.
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            2 KFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             cccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            4555556666666566666655555555553

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.39  E-value=2.2e-07  Score=50.99  Aligned_cols=34  Identities=26%  Similarity=0.593  Sum_probs=24.0

Q ss_pred             ccCCCCcccCcCCCccCCcHHHHHHHHHccCCCC
Q psy4573         200 HTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRP  233 (306)
Q Consensus       200 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  233 (306)
                      |.++++|.|.+|++.|...+.|..|+++|++++|
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            5566777777777777777777777777766553

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.38  E-value=1.7e-07  Score=52.59  Aligned_cols=34  Identities=29%  Similarity=0.771  Sum_probs=19.3

Q ss_pred             cCCCCcccC--cccCcCCChhHHHHHHhhccCCCcc
Q psy4573         229 TGQRPYVCE--ICGKGFTQKQALNTHKRGHTGEIPY  262 (306)
Q Consensus       229 ~~~~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~  262 (306)
                      +++++|.|.  .|++.|.....|..|++.|.++++|
T Consensus         2 ~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            2 SDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             TTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            445555665  3666666666666665555555544

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.37  E-value=1.9e-07  Score=51.64  Aligned_cols=31  Identities=39%  Similarity=0.692  Sum_probs=14.6

Q ss_pred             ccCCCCcccCcccCcCCChhHHHHHHhhccC
Q psy4573         228 HTGQRPYVCEICGKGFTQKQALNTHKRGHTG  258 (306)
Q Consensus       228 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  258 (306)
                      |.++++|.|++|++.|.....|..|++.|.+
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elt_A            4 GSSGKPYKCPQCSYASAIKANLNVHLRKHTG   34 (36)
T ss_dssp             SCCCCSEECSSSSCEESSHHHHHHHHHHHTC
T ss_pred             CCCCCCCCCCCCCcccCCHHHHHHHHHHccC
Confidence            3444444444444444444444444444443

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.37  E-value=2.6e-07  Score=51.02  Aligned_cols=32  Identities=34%  Similarity=0.724  Sum_probs=17.1

Q ss_pred             ccCCCCcccCcccCcCCChhHHHHHHhhccCC
Q psy4573         228 HTGQRPYVCEICGKGFTQKQALNTHKRGHTGE  259 (306)
Q Consensus       228 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~  259 (306)
                      |.++++|.|++|++.|.....|..|+++|.++
T Consensus         4 h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A            4 GSSGKTHLCDMCGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             CCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSC
T ss_pred             CCCCCCeecCcCCCCcCchHHHHHHHHHhcCC
Confidence            34455555555555555555555555555443

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.36  E-value=1.3e-07  Score=52.76  Aligned_cols=31  Identities=26%  Similarity=0.491  Sum_probs=15.4

Q ss_pred             ccCCCCcccCcccCcCCCh-hHHHHHHhhccC
Q psy4573         228 HTGQRPYVCEICGKGFTQK-QALNTHKRGHTG  258 (306)
Q Consensus       228 h~~~~~~~C~~C~~~f~~~-~~L~~H~~~h~~  258 (306)
                      |.++++|.|++|++.|... ..|..|++.|.+
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~   35 (37)
T 2elp_A            4 GSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEG   35 (37)
T ss_dssp             CCCCCCEECSSSSCEECSSCHHHHHHHHHHHT
T ss_pred             CCCCCCeECCCCChhhccCHHHHHHHHHhcCC
Confidence            4444455555555555554 555555544443

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.36  E-value=1.6e-07  Score=51.86  Aligned_cols=25  Identities=24%  Similarity=0.628  Sum_probs=15.1

Q ss_pred             cCCCCcccCcccCcCCChhHHHHHH
Q psy4573         229 TGQRPYVCEICGKGFTQKQALNTHK  253 (306)
Q Consensus       229 ~~~~~~~C~~C~~~f~~~~~L~~H~  253 (306)
                      .+++||.|++||++|...+.|..|+
T Consensus         4 ~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            4 LKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCccCeECCCCCCccCCHhHccCcC
Confidence            4555666666666666666666665

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.35  E-value=2.3e-07  Score=51.33  Aligned_cols=31  Identities=23%  Similarity=0.575  Sum_probs=14.3

Q ss_pred             ccCCCCcccCcccCcCCChhHHHHHHhhccC
Q psy4573         228 HTGQRPYVCEICGKGFTQKQALNTHKRGHTG  258 (306)
Q Consensus       228 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  258 (306)
                      |.++++|.|++|++.|.....|..|++.|.+
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elq_A            4 GSSGKPFKCSLCEYATRSKSNLKAHMNRHST   34 (36)
T ss_dssp             SCCCCSEECSSSSCEESCHHHHHHHHHHSST
T ss_pred             CCCCCCccCCCCCchhCCHHHHHHHHHHhcc
Confidence            3344444444444444444444444444443

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.35  E-value=2.6e-07  Score=51.09  Aligned_cols=31  Identities=23%  Similarity=0.422  Sum_probs=15.9

Q ss_pred             ccCCCCcccCcccCcCCChhHHHHHHhhccC
Q psy4573         228 HTGQRPYVCEICGKGFTQKQALNTHKRGHTG  258 (306)
Q Consensus       228 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  258 (306)
                      |.++++|.|.+|++.|.....|..|+++|.+
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elv_A            4 GSSGLLYDCHICERKFKNELDRDRHMLVHGD   34 (36)
T ss_dssp             SCCCCCEECSSSCCEESSHHHHHHHHTTTST
T ss_pred             CCCCCCeECCCCCCccCCHHHHHHHHHHhcC
Confidence            3444555555555555555555555555443

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.30  E-value=1.4e-07  Score=52.74  Aligned_cols=24  Identities=25%  Similarity=0.497  Sum_probs=9.8

Q ss_pred             cCCCCcccCcccCcCCChhHHHHH
Q psy4573         229 TGQRPYVCEICGKGFTQKQALNTH  252 (306)
Q Consensus       229 ~~~~~~~C~~C~~~f~~~~~L~~H  252 (306)
                      ++++||.|++|++.|.....|..|
T Consensus         5 ~~~k~~~C~~C~k~f~~~~~L~~H   28 (37)
T 2elm_A            5 SSGHLYYCSQCHYSSITKNCLKRH   28 (37)
T ss_dssp             SSSCEEECSSSSCEEECHHHHHHH
T ss_pred             CCCcCeECCCCCcccCCHHHHHHH
Confidence            333444444444444444444444

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.28  E-value=4.2e-07  Score=50.22  Aligned_cols=30  Identities=37%  Similarity=0.674  Sum_probs=14.5

Q ss_pred             cCCCCcccCcccCcCCChhHHHHHHhhccC
Q psy4573         229 TGQRPYVCEICGKGFTQKQALNTHKRGHTG  258 (306)
Q Consensus       229 ~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  258 (306)
                      .++++|.|++|++.|.....|..|+++|.+
T Consensus         5 ~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2els_A            5 SSGKIFTCEYCNKVFKFKHSLQAHLRIHTN   34 (36)
T ss_dssp             SCCCCEECTTTCCEESSHHHHHHHHHHHCC
T ss_pred             CCCCCEECCCCCceeCCHHHHHHHHHHhCC
Confidence            344445555555555555555555444443

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.27  E-value=2.3e-07  Score=51.73  Aligned_cols=34  Identities=21%  Similarity=0.379  Sum_probs=30.6

Q ss_pred             hhccCCCcccCCcchHhhcChHHHHHH-hhhcCCC
Q psy4573         254 RGHTGEIPYHCEFCSERFSTKALVRHH-VRSHHSS  287 (306)
Q Consensus       254 ~~h~~~~~~~C~~C~~~f~~~~~l~~H-~~~~h~~  287 (306)
                      +.|.++++|.|..|+++|.....|..| ++.|.+.
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            578899999999999999999999999 7877653

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.26  E-value=3.8e-07  Score=54.25  Aligned_cols=32  Identities=34%  Similarity=0.848  Sum_probs=16.3

Q ss_pred             ccCCCCcccCcccCcCCChhHHHHHHh-hccCC
Q psy4573         228 HTGQRPYVCEICGKGFTQKQALNTHKR-GHTGE  259 (306)
Q Consensus       228 h~~~~~~~C~~C~~~f~~~~~L~~H~~-~h~~~  259 (306)
                      |+++++|.|.+|++.|.....|..|++ .|.++
T Consensus         2 Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e   34 (48)
T 3iuf_A            2 EDRDKPYACDICGKRYKNRPGLSYHYAHSHLAE   34 (48)
T ss_dssp             CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC-
T ss_pred             CCCCcCEECCCcCcccCCHHHHHHHhhhhcCCC
Confidence            444555555555555555555555555 44443

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.25  E-value=7.8e-07  Score=49.83  Aligned_cols=32  Identities=19%  Similarity=0.322  Sum_probs=20.8

Q ss_pred             ccCCCCcccCc--CCCccCCcHHHHHHHHHccCC
Q psy4573         200 HTNERPAVCSY--CGKGFRRGDALTEHIRIHTGQ  231 (306)
Q Consensus       200 h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  231 (306)
                      +.+++||.|..  |++.|...+.|..|+++|+++
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            45566666664  666666666666676666654

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.24  E-value=6.5e-07  Score=50.10  Aligned_cols=35  Identities=26%  Similarity=0.596  Sum_probs=24.4

Q ss_pred             ccCCCCcccC--cCCCccCCcHHHHHHHHHccCCCCc
Q psy4573         200 HTNERPAVCS--YCGKGFRRGDALTEHIRIHTGQRPY  234 (306)
Q Consensus       200 h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~  234 (306)
                      |+++++|.|.  .|++.|...+.|..|+++|+++++|
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            4566777777  4777777777777777777776665

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.21  E-value=5e-07  Score=49.91  Aligned_cols=33  Identities=18%  Similarity=0.486  Sum_probs=30.4

Q ss_pred             hccCCCcccCCcchHhhcChHHHHHHhhhcCCC
Q psy4573         255 GHTGEIPYHCEFCSERFSTKALVRHHVRSHHSS  287 (306)
Q Consensus       255 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  287 (306)
                      .|.++++|.|.+|++.|.....|..|+++|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHhcCC
Confidence            578899999999999999999999999998764

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.21  E-value=9.3e-07  Score=48.75  Aligned_cols=33  Identities=24%  Similarity=0.514  Sum_probs=22.8

Q ss_pred             hccCCCCcccCcCCCccCCcHHHHHHHHHccCC
Q psy4573         199 THTNERPAVCSYCGKGFRRGDALTEHIRIHTGQ  231 (306)
Q Consensus       199 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  231 (306)
                      .|.++++|.|.+|++.|.....|..|+++|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            3 SGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             SSCCCCSEECSSSSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCCCCccCCCCCchhCCHHHHHHHHHHhccC
Confidence            356667777777777777777777777776654

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.21  E-value=7.5e-07  Score=49.49  Aligned_cols=33  Identities=30%  Similarity=0.606  Sum_probs=25.6

Q ss_pred             hccCCCCcccCcCCCccCCc-HHHHHHHHHccCC
Q psy4573         199 THTNERPAVCSYCGKGFRRG-DALTEHIRIHTGQ  231 (306)
Q Consensus       199 ~h~~~~~~~C~~C~~~f~~~-~~l~~H~~~h~~~  231 (306)
                      +|.++++|.|..|++.|... +.|..|+++|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            3 SGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             SCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCCCCCeECCCCChhhccCHHHHHHHHHhcCCC
Confidence            46777788888888888887 8888888877665

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.21  E-value=1e-06  Score=48.57  Aligned_cols=33  Identities=27%  Similarity=0.525  Sum_probs=23.2

Q ss_pred             hccCCCCcccCcCCCccCCcHHHHHHHHHccCC
Q psy4573         199 THTNERPAVCSYCGKGFRRGDALTEHIRIHTGQ  231 (306)
Q Consensus       199 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  231 (306)
                      .|.++++|.|.+|++.|.....|..|+++|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHccCC
Confidence            356667777777777777777777777777654

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.20  E-value=8.2e-08  Score=51.73  Aligned_cols=30  Identities=23%  Similarity=0.485  Sum_probs=15.3

Q ss_pred             CcccCcccCcCCChhHHHHHHhhccCCCcc
Q psy4573         233 PYVCEICGKGFTQKQALNTHKRGHTGEIPY  262 (306)
Q Consensus       233 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~  262 (306)
                      ||.|++|++.|...+.|..|+++|.++++|
T Consensus         2 p~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            2 AFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            455555555555555555555555554443

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.20  E-value=3.3e-07  Score=50.62  Aligned_cols=32  Identities=16%  Similarity=0.205  Sum_probs=28.5

Q ss_pred             ccCCCcccCCcchHhhcChHHHHHHhhhcCCCCCCCccc
Q psy4573         256 HTGEIPYHCEFCSERFSTKALVRHHVRSHHSSARLGLNL  294 (306)
Q Consensus       256 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~  294 (306)
                      +.+++||.|..|+++|.+.+.|.+|+       +|.|+.
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~-------py~C~~   34 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ-------AYYCSH   34 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH-------HHTSTT
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC-------CeECcC
Confidence            46899999999999999999999998       777754

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.18  E-value=1.5e-06  Score=47.81  Aligned_cols=32  Identities=28%  Similarity=0.665  Sum_probs=22.8

Q ss_pred             ccCCCCcccCcCCCccCCcHHHHHHHHHccCC
Q psy4573         200 HTNERPAVCSYCGKGFRRGDALTEHIRIHTGQ  231 (306)
Q Consensus       200 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  231 (306)
                      |.++++|.|.+|++.|.....|..|+++|+++
T Consensus         4 h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A            4 GSSGKTHLCDMCGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             CCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSC
T ss_pred             CCCCCCeecCcCCCCcCchHHHHHHHHHhcCC
Confidence            55667777777777777777777777777654

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.15  E-value=1.6e-06  Score=45.04  Aligned_cols=27  Identities=41%  Similarity=0.966  Sum_probs=14.7

Q ss_pred             CcccCcccCcCCChhHHHHHHhhccCC
Q psy4573         233 PYVCEICGKGFTQKQALNTHKRGHTGE  259 (306)
Q Consensus       233 ~~~C~~C~~~f~~~~~L~~H~~~h~~~  259 (306)
                      ||.|++|++.|.....|..|++.|.++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            455555555555555555555555443

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.15  E-value=1.2e-06  Score=45.88  Aligned_cols=27  Identities=30%  Similarity=0.800  Sum_probs=13.8

Q ss_pred             CCcccCcccCcCCChhHHHHHHhhccC
Q psy4573         232 RPYVCEICGKGFTQKQALNTHKRGHTG  258 (306)
Q Consensus       232 ~~~~C~~C~~~f~~~~~L~~H~~~h~~  258 (306)
                      ++|.|.+|++.|.....|..|++.|.+
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~~~h~~   28 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHLETHDT   28 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHTTCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHHhcc
Confidence            345555555555555555555554444

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.15  E-value=1.2e-06  Score=45.57  Aligned_cols=27  Identities=26%  Similarity=0.508  Sum_probs=14.8

Q ss_pred             CcccCcccCcCCChhHHHHHHhhccCC
Q psy4573         233 PYVCEICGKGFTQKQALNTHKRGHTGE  259 (306)
Q Consensus       233 ~~~C~~C~~~f~~~~~L~~H~~~h~~~  259 (306)
                      ||.|++|++.|.....|..|+++|.++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            2 KFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            455555555555555555555555443

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.14  E-value=1.1e-06  Score=48.89  Aligned_cols=30  Identities=37%  Similarity=0.736  Sum_probs=15.1

Q ss_pred             cCCCCcccCc--ccCcCCChhHHHHHHhhccC
Q psy4573         229 TGQRPYVCEI--CGKGFTQKQALNTHKRGHTG  258 (306)
Q Consensus       229 ~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~  258 (306)
                      +++++|.|.+  |++.|...+.|..|+++|.+
T Consensus         4 ~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~   35 (37)
T 1va1_A            4 GKKKQHICHIQGCGKVYGKTSHLRAHLRWHTG   35 (37)
T ss_dssp             SSCCCEECCSTTCCCEESCHHHHHHHHHHHHT
T ss_pred             CCCCCCCCCCCCCCCccCCHHHHHHHHHhcCC
Confidence            4445555542  55555555555555555444

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.12  E-value=2.1e-06  Score=47.29  Aligned_cols=32  Identities=34%  Similarity=0.712  Sum_probs=20.0

Q ss_pred             ccCCCCcccCcCCCccCCcHHHHHHHHHccCC
Q psy4573         200 HTNERPAVCSYCGKGFRRGDALTEHIRIHTGQ  231 (306)
Q Consensus       200 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  231 (306)
                      |.++++|.|..|++.|.....|..|+++|+++
T Consensus         4 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            4 GSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             TSCCCCEECTTTCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCCCCEECCCCCceeCCHHHHHHHHHHhCCC
Confidence            44556666666666666666666666666554

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.11  E-value=2e-06  Score=44.96  Aligned_cols=27  Identities=22%  Similarity=0.479  Sum_probs=13.8

Q ss_pred             CcccCcccCcCCChhHHHHHHhhccCC
Q psy4573         233 PYVCEICGKGFTQKQALNTHKRGHTGE  259 (306)
Q Consensus       233 ~~~C~~C~~~f~~~~~L~~H~~~h~~~  259 (306)
                      +|.|.+|++.|.....|..|++.|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   28 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHIKTKHSK   28 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTSS
T ss_pred             CccCCCCCCccCCHHHHHHHHHHHccC
Confidence            445555555555555555555554443

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.09  E-value=1.7e-06  Score=44.53  Aligned_cols=26  Identities=54%  Similarity=1.092  Sum_probs=13.6

Q ss_pred             CCcccCcccCcCCChhHHHHHHhhcc
Q psy4573         232 RPYVCEICGKGFTQKQALNTHKRGHT  257 (306)
Q Consensus       232 ~~~~C~~C~~~f~~~~~L~~H~~~h~  257 (306)
                      ++|.|++|++.|.....|..|++.|+
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHTTSC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHhcC
Confidence            34555555555555555555555443

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.08  E-value=2.8e-06  Score=44.94  Aligned_cols=27  Identities=56%  Similarity=1.150  Sum_probs=16.3

Q ss_pred             CcccC--cccCcCCChhHHHHHHhhccCC
Q psy4573         233 PYVCE--ICGKGFTQKQALNTHKRGHTGE  259 (306)
Q Consensus       233 ~~~C~--~C~~~f~~~~~L~~H~~~h~~~  259 (306)
                      ||.|+  .||+.|...+.|..|+++|.++
T Consensus         2 p~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            2 PFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            55665  5666666666666666665554

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.07  E-value=3.4e-06  Score=44.96  Aligned_cols=28  Identities=39%  Similarity=0.880  Sum_probs=15.8

Q ss_pred             CCcccC--cccCcCCChhHHHHHHhhccCC
Q psy4573         232 RPYVCE--ICGKGFTQKQALNTHKRGHTGE  259 (306)
Q Consensus       232 ~~~~C~--~C~~~f~~~~~L~~H~~~h~~~  259 (306)
                      +||.|.  .|++.|.....|..|+++|.++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            455555  5555555555555555555543

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.07  E-value=1.3e-06  Score=51.77  Aligned_cols=34  Identities=26%  Similarity=0.684  Sum_probs=29.4

Q ss_pred             hccCCCcccCCcchHhhcChHHHHHHhh-hcCCCC
Q psy4573         255 GHTGEIPYHCEFCSERFSTKALVRHHVR-SHHSSA  288 (306)
Q Consensus       255 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~~h~~~  288 (306)
                      +|.++++|.|.+|++.|.....|..|++ .|.++.
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~   35 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEE   35 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC--
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCC
Confidence            4789999999999999999999999999 887764

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.06  E-value=1.9e-06  Score=43.96  Aligned_cols=25  Identities=28%  Similarity=0.712  Sum_probs=12.4

Q ss_pred             CCcccCcccCcCCChhHHHHHHhhc
Q psy4573         232 RPYVCEICGKGFTQKQALNTHKRGH  256 (306)
Q Consensus       232 ~~~~C~~C~~~f~~~~~L~~H~~~h  256 (306)
                      +||.|+.||+.|.....|..|++.|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHHC
T ss_pred             cCccCCCcChhhCCHHHHHHHHHHc
Confidence            3445555555555555555554443

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.06  E-value=2.9e-07  Score=54.50  Aligned_cols=31  Identities=19%  Similarity=0.473  Sum_probs=12.9

Q ss_pred             ccCCCCcccC--cccCcCCChhHHHHHHhhccC
Q psy4573         228 HTGQRPYVCE--ICGKGFTQKQALNTHKRGHTG  258 (306)
Q Consensus       228 h~~~~~~~C~--~C~~~f~~~~~L~~H~~~h~~  258 (306)
                      |.+++||.|+  .|++.|...+.|..|++.|.+
T Consensus        13 H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~   45 (47)
T 1ncs_A           13 EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLE   45 (47)
T ss_dssp             EETTTEEECCCTTCCCEECSSSSHHHHHHHHTT
T ss_pred             cCCCCCeECCCCCCCCccCCHHHHHHHHHHccC
Confidence            3444444442  344444444444444444433

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.06  E-value=2.2e-06  Score=44.39  Aligned_cols=27  Identities=30%  Similarity=0.512  Sum_probs=15.3

Q ss_pred             CcccCcccCcCCChhHHHHHHhhccCC
Q psy4573         233 PYVCEICGKGFTQKQALNTHKRGHTGE  259 (306)
Q Consensus       233 ~~~C~~C~~~f~~~~~L~~H~~~h~~~  259 (306)
                      ||.|++|++.|.....|..|++.|.++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            2 EHKCPHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCSSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHhccC
Confidence            455555555555555555555555543

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.04  E-value=2e-06  Score=44.60  Aligned_cols=27  Identities=48%  Similarity=0.865  Sum_probs=13.9

Q ss_pred             CcccCcccCcCCChhHHHHHHhhccCC
Q psy4573         233 PYVCEICGKGFTQKQALNTHKRGHTGE  259 (306)
Q Consensus       233 ~~~C~~C~~~f~~~~~L~~H~~~h~~~  259 (306)
                      +|.|.+|++.|.....|..|++.|.++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2m0f_A            2 PLKCRECGKQFTTSGNLKRHLRIHSGE   28 (29)
T ss_dssp             CEECTTTSCEESCHHHHHHHHHHHHTC
T ss_pred             CccCCCCCCccCChhHHHHHHHHhcCC
Confidence            455555555555555555555555443

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.04  E-value=1.6e-06  Score=44.35  Aligned_cols=25  Identities=36%  Similarity=0.901  Sum_probs=12.7

Q ss_pred             CCcccCcccCcCCChhHHHHHHhhc
Q psy4573         232 RPYVCEICGKGFTQKQALNTHKRGH  256 (306)
Q Consensus       232 ~~~~C~~C~~~f~~~~~L~~H~~~h  256 (306)
                      +||.|++||+.|...+.|..|++.|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHhc
Confidence            3455555555555555555555443

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.04  E-value=3.3e-06  Score=53.59  Aligned_cols=33  Identities=27%  Similarity=0.432  Sum_probs=23.9

Q ss_pred             ccCCCCcccCcccCcCCChhHHHHHHhhccCCC
Q psy4573         228 HTGQRPYVCEICGKGFTQKQALNTHKRGHTGEI  260 (306)
Q Consensus       228 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~  260 (306)
                      +.+++||+|.+|++.|.....|..|+++|.+..
T Consensus         8 ~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~   40 (66)
T 2epp_A            8 LREAGILPCGLCGKVFTDANRLRQHEAQHGVTS   40 (66)
T ss_dssp             CCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTS
T ss_pred             CCCccCcCCCCCCCccCCHHHHHhhhhhhCCCc
Confidence            456677777777777777777777777777654

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.04  E-value=4.2e-07  Score=48.83  Aligned_cols=31  Identities=19%  Similarity=0.535  Sum_probs=28.7

Q ss_pred             CcccCCcchHhhcChHHHHHHhhhcCCCCCC
Q psy4573         260 IPYHCEFCSERFSTKALVRHHVRSHHSSARL  290 (306)
Q Consensus       260 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~  290 (306)
                      ++|.|..|+++|...+.|..|+++|+++.+|
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            4799999999999999999999999998876

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.03  E-value=3.3e-06  Score=42.95  Aligned_cols=25  Identities=40%  Similarity=0.906  Sum_probs=13.9

Q ss_pred             cccCcccCcCCChhHHHHHHhhccC
Q psy4573         234 YVCEICGKGFTQKQALNTHKRGHTG  258 (306)
Q Consensus       234 ~~C~~C~~~f~~~~~L~~H~~~h~~  258 (306)
                      |.|.+|++.|.....|..|+++|.+
T Consensus         2 ~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            2 YKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             ccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            5555555555555555555555543

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.02  E-value=3.8e-06  Score=53.35  Aligned_cols=32  Identities=25%  Similarity=0.403  Sum_probs=20.4

Q ss_pred             ccCCCCcccCcCCCccCCcHHHHHHHHHccCC
Q psy4573         200 HTNERPAVCSYCGKGFRRGDALTEHIRIHTGQ  231 (306)
Q Consensus       200 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  231 (306)
                      +..++||.|.+|++.|.....|..|+++|+++
T Consensus         8 ~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~   39 (66)
T 2epp_A            8 LREAGILPCGLCGKVFTDANRLRQHEAQHGVT   39 (66)
T ss_dssp             CCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTT
T ss_pred             CCCccCcCCCCCCCccCCHHHHHhhhhhhCCC
Confidence            44556666666666666666666666666654

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.25  E-value=7.9e-07  Score=46.32  Aligned_cols=26  Identities=54%  Similarity=0.993  Sum_probs=11.9

Q ss_pred             CcccCcccCcCCChhHHHHHHhhccC
Q psy4573         233 PYVCEICGKGFTQKQALNTHKRGHTG  258 (306)
Q Consensus       233 ~~~C~~C~~~f~~~~~L~~H~~~h~~  258 (306)
                      ||.|.+|++.|.....|..|++.|.+
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 2lvt_A            2 PCQCVMCGKAFTQASSLIAHVRQHTG   27 (29)
Confidence            34444444444444444444444433

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.99  E-value=4.9e-07  Score=53.44  Aligned_cols=39  Identities=15%  Similarity=0.354  Sum_probs=33.9

Q ss_pred             HHHHHhhccCCCcccCC--cchHhhcChHHHHHHhhhcCCC
Q psy4573         249 LNTHKRGHTGEIPYHCE--FCSERFSTKALVRHHVRSHHSS  287 (306)
Q Consensus       249 L~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~h~~  287 (306)
                      +..|...|.++++|.|.  .|+++|...+.|..|+++|+++
T Consensus         6 ~~~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~e   46 (47)
T 1ncs_A            6 SIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             SGGGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             HHHHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCC
Confidence            34556679999999996  7999999999999999999875

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=97.98  E-value=4.3e-06  Score=46.37  Aligned_cols=32  Identities=31%  Similarity=0.739  Sum_probs=21.9

Q ss_pred             ccCCCCcccCc--CCCccCCcHHHHHHHHHccCC
Q psy4573         200 HTNERPAVCSY--CGKGFRRGDALTEHIRIHTGQ  231 (306)
Q Consensus       200 h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  231 (306)
                      |+++++|.|.+  |++.|...+.|..|+++|+++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~e   36 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGE   36 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            45667777763  777777777777777776654

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.21  E-value=1e-06  Score=46.22  Aligned_cols=25  Identities=48%  Similarity=0.858  Sum_probs=11.4

Q ss_pred             CcccCcccCcCCChhHHHHHHhhcc
Q psy4573         233 PYVCEICGKGFTQKQALNTHKRGHT  257 (306)
Q Consensus       233 ~~~C~~C~~~f~~~~~L~~H~~~h~  257 (306)
                      ||.|..|++.|.....|..|++.|+
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~h~   27 (30)
T 2lvr_A            3 PYVCIHCQRQFADPGALQRHVRIHT   27 (30)
Confidence            3444444444444444444444443

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.95  E-value=5.7e-06  Score=43.08  Aligned_cols=26  Identities=27%  Similarity=0.645  Sum_probs=14.2

Q ss_pred             ceeccccccccCChHHHHHHHhhccC
Q psy4573         177 KFECEVCHRKLSTKNHLRLHMRTHTN  202 (306)
Q Consensus       177 ~~~C~~C~~~f~~~~~l~~H~~~h~~  202 (306)
                      +|.|+.|++.|.....|..|++.|++
T Consensus         3 ~~~C~~C~~~f~~~~~l~~H~~~h~~   28 (30)
T 2m0d_A            3 PYQCDYCGRSFSDPTSKMRHLETHDT   28 (30)
T ss_dssp             CEECTTTCCEESCHHHHHHHHHTTCC
T ss_pred             CccCCCCCcccCCHHHHHHHHHHhcc
Confidence            45555555555555555555555544

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.95  E-value=5.6e-06  Score=43.21  Aligned_cols=27  Identities=33%  Similarity=0.887  Sum_probs=15.2

Q ss_pred             CcccCcccCcCCChhHHHHH-HhhccCC
Q psy4573         233 PYVCEICGKGFTQKQALNTH-KRGHTGE  259 (306)
Q Consensus       233 ~~~C~~C~~~f~~~~~L~~H-~~~h~~~  259 (306)
                      ||.|+.|++.|.....|..| ++.|.++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHccCC
Confidence            45566666666666666666 4555443

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=97.94  E-value=7.9e-06  Score=42.20  Aligned_cols=26  Identities=38%  Similarity=0.760  Sum_probs=13.0

Q ss_pred             CcccCcCCCccCCcHHHHHHHHHccC
Q psy4573         205 PAVCSYCGKGFRRGDALTEHIRIHTG  230 (306)
Q Consensus       205 ~~~C~~C~~~f~~~~~l~~H~~~h~~  230 (306)
                      ||.|..|++.|.....|..|+++|++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~   27 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYRSHTN   27 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHHSC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhcC
Confidence            34455555555555555555554443

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.94  E-value=3.2e-06  Score=43.45  Aligned_cols=28  Identities=39%  Similarity=0.780  Sum_probs=25.4

Q ss_pred             CCcccCCcchHhhcChHHHHHHhhhcCC
Q psy4573         259 EIPYHCEFCSERFSTKALVRHHVRSHHS  286 (306)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~  286 (306)
                      +++|.|..|+++|.....|..|++.|++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            4689999999999999999999998864

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=97.94  E-value=5.6e-06  Score=42.83  Aligned_cols=26  Identities=38%  Similarity=0.850  Sum_probs=13.3

Q ss_pred             ceeccccccccCChHHHHHHHhhccC
Q psy4573         177 KFECEVCHRKLSTKNHLRLHMRTHTN  202 (306)
Q Consensus       177 ~~~C~~C~~~f~~~~~l~~H~~~h~~  202 (306)
                      +|.|+.|++.|.....|..|+++|++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 1rik_A            2 KFACPECPKRFMRSDHLTLHILLHEN   27 (29)
T ss_dssp             CEECSSSSCEESCSHHHHHHHTGGGS
T ss_pred             CccCCCCCchhCCHHHHHHHHHHhcC
Confidence            34555555555555555555555443

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=97.93  E-value=8.5e-06  Score=42.38  Aligned_cols=27  Identities=22%  Similarity=0.464  Sum_probs=15.2

Q ss_pred             CcccCcCCCccCCcHHHHHHHHHccCC
Q psy4573         205 PAVCSYCGKGFRRGDALTEHIRIHTGQ  231 (306)
Q Consensus       205 ~~~C~~C~~~f~~~~~l~~H~~~h~~~  231 (306)
                      +|.|..|++.|...+.|..|+++|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   28 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHIKTKHSK   28 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTSS
T ss_pred             CccCCCCCCccCCHHHHHHHHHHHccC
Confidence            455555555555555555555555544

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.92  E-value=3.8e-06  Score=42.81  Aligned_cols=27  Identities=30%  Similarity=0.743  Sum_probs=24.6

Q ss_pred             CCcccCCcchHhhcChHHHHHHhhhcC
Q psy4573         259 EIPYHCEFCSERFSTKALVRHHVRSHH  285 (306)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~l~~H~~~~h  285 (306)
                      +++|.|..|++.|.....|..|++.|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            468999999999999999999998874

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.92  E-value=2.9e-06  Score=43.32  Aligned_cols=27  Identities=30%  Similarity=0.723  Sum_probs=24.5

Q ss_pred             CCcccCCcchHhhcChHHHHHHhhhcC
Q psy4573         259 EIPYHCEFCSERFSTKALVRHHVRSHH  285 (306)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~l~~H~~~~h  285 (306)
                      +++|.|..|+++|...+.|..|++.|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            468999999999999999999998874

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.09  E-value=1.8e-06  Score=43.59  Aligned_cols=23  Identities=57%  Similarity=1.057  Sum_probs=10.8

Q ss_pred             CcccCcccCcCCChhHHHHHHhh
Q psy4573         233 PYVCEICGKGFTQKQALNTHKRG  255 (306)
Q Consensus       233 ~~~C~~C~~~f~~~~~L~~H~~~  255 (306)
                      ||.|++||+.|.....|..|++.
T Consensus         2 p~~C~~C~k~f~~~~~l~~H~~~   24 (26)
T 2lvu_A            2 PYVCERCGKRFVQSSQLANHIRH   24 (26)
Confidence            34444444444444444444443

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.87  E-value=7.7e-06  Score=42.20  Aligned_cols=26  Identities=27%  Similarity=0.768  Sum_probs=13.4

Q ss_pred             ceeccccccccCChHHHHHHHhhccC
Q psy4573         177 KFECEVCHRKLSTKNHLRLHMRTHTN  202 (306)
Q Consensus       177 ~~~C~~C~~~f~~~~~l~~H~~~h~~  202 (306)
                      +|.|+.|++.|.....|..|+++|++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 2m0f_A            2 PLKCRECGKQFTTSGNLKRHLRIHSG   27 (29)
T ss_dssp             CEECTTTSCEESCHHHHHHHHHHHHT
T ss_pred             CccCCCCCCccCChhHHHHHHHHhcC
Confidence            34555555555555555555555443

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.86  E-value=9.1e-06  Score=41.87  Aligned_cols=27  Identities=30%  Similarity=0.644  Sum_probs=14.9

Q ss_pred             CcccCcCCCccCCcHHHHHHHHHccCC
Q psy4573         205 PAVCSYCGKGFRRGDALTEHIRIHTGQ  231 (306)
Q Consensus       205 ~~~C~~C~~~f~~~~~l~~H~~~h~~~  231 (306)
                      ||.|..|++.|.....|..|+++|+++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            2 EHKCPHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCSSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHhccC
Confidence            455555555555555555555555443

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.86  E-value=1.4e-05  Score=42.37  Aligned_cols=28  Identities=36%  Similarity=0.689  Sum_probs=15.4

Q ss_pred             CCcccC--cCCCccCCcHHHHHHHHHccCC
Q psy4573         204 RPAVCS--YCGKGFRRGDALTEHIRIHTGQ  231 (306)
Q Consensus       204 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~  231 (306)
                      +||.|.  .|++.|...+.|..|+++|+++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            455555  5555555555555555555543

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=97.86  E-value=6e-06  Score=41.91  Aligned_cols=26  Identities=31%  Similarity=0.782  Sum_probs=23.7

Q ss_pred             cccCCcchHhhcChHHHHHHhhhcCC
Q psy4573         261 PYHCEFCSERFSTKALVRHHVRSHHS  286 (306)
Q Consensus       261 ~~~C~~C~~~f~~~~~l~~H~~~~h~  286 (306)
                      +|.|.+|++.|.....|..|+++|++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            58999999999999999999999875

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.06  E-value=2.2e-06  Score=44.54  Aligned_cols=28  Identities=29%  Similarity=0.669  Sum_probs=25.6

Q ss_pred             CcccCCcchHhhcChHHHHHHhhhcCCC
Q psy4573         260 IPYHCEFCSERFSTKALVRHHVRSHHSS  287 (306)
Q Consensus       260 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~  287 (306)
                      ++|.|.+|+++|.....|..|++.|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            4799999999999999999999998865

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.03  E-value=2.5e-06  Score=44.60  Aligned_cols=29  Identities=31%  Similarity=0.700  Sum_probs=26.3

Q ss_pred             CCcccCCcchHhhcChHHHHHHhhhcCCC
Q psy4573         259 EIPYHCEFCSERFSTKALVRHHVRSHHSS  287 (306)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  287 (306)
                      +++|.|..|++.|.....|..|++.|+++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            36799999999999999999999998864

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.82  E-value=1.3e-05  Score=42.18  Aligned_cols=26  Identities=35%  Similarity=0.772  Sum_probs=13.5

Q ss_pred             ceecc--ccccccCChHHHHHHHhhccC
Q psy4573         177 KFECE--VCHRKLSTKNHLRLHMRTHTN  202 (306)
Q Consensus       177 ~~~C~--~C~~~f~~~~~l~~H~~~h~~  202 (306)
                      +|.|+  .|++.|.....|..|+++|++
T Consensus         2 p~~C~~~~C~k~f~~~~~L~~H~~~H~~   29 (31)
T 1sp2_A            2 PFMCTWSYCGKRFTRSDELQRHKRTHTG   29 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSC
T ss_pred             CcCCcCCCCCcccCCHhHHHHHHHHhcC
Confidence            34554  555555555555555555544

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.95  E-value=3.7e-06  Score=42.40  Aligned_cols=26  Identities=38%  Similarity=0.884  Sum_probs=23.6

Q ss_pred             CcccCCcchHhhcChHHHHHHhhhcC
Q psy4573         260 IPYHCEFCSERFSTKALVRHHVRSHH  285 (306)
Q Consensus       260 ~~~~C~~C~~~f~~~~~l~~H~~~~h  285 (306)
                      ++|.|+.|+++|.....|..|+++|+
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            47999999999999999999998763

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.69  E-value=2.2e-05  Score=40.81  Aligned_cols=26  Identities=38%  Similarity=0.870  Sum_probs=13.0

Q ss_pred             CcccCcCCCccCCcHHHHHH-HHHccC
Q psy4573         205 PAVCSYCGKGFRRGDALTEH-IRIHTG  230 (306)
Q Consensus       205 ~~~C~~C~~~f~~~~~l~~H-~~~h~~  230 (306)
                      ||.|..|++.|...+.|..| +++|++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~   28 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIHSG   28 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTSCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHccC
Confidence            44555555555555555555 344443

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.66  E-value=2.1e-05  Score=40.51  Aligned_cols=25  Identities=48%  Similarity=1.004  Sum_probs=12.9

Q ss_pred             CcccC--cccCcCCChhHHHHHHhhcc
Q psy4573         233 PYVCE--ICGKGFTQKQALNTHKRGHT  257 (306)
Q Consensus       233 ~~~C~--~C~~~f~~~~~L~~H~~~h~  257 (306)
                      +|.|.  .|++.|...+.|..|+++|.
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            44555  55555555555555555443

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.49  E-value=0.00012  Score=45.99  Aligned_cols=45  Identities=20%  Similarity=0.285  Sum_probs=23.6

Q ss_pred             CCCccCCcHHHHHHHH-HccCCC------CcccC--cccCcCCChhHHHHHHhh
Q psy4573         211 CGKGFRRGDALTEHIR-IHTGQR------PYVCE--ICGKGFTQKQALNTHKRG  255 (306)
Q Consensus       211 C~~~f~~~~~l~~H~~-~h~~~~------~~~C~--~C~~~f~~~~~L~~H~~~  255 (306)
                      |++.|.+...|..|+. .|.+.+      +|.|.  .|+..+.....|..|++.
T Consensus         9 C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~   62 (64)
T 1zw8_A            9 CPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINA   62 (64)
T ss_dssp             CCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHH
T ss_pred             CCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccc
Confidence            5566666666666652 454433      45553  455555555555555543

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.46  E-value=4e-05  Score=39.34  Aligned_cols=27  Identities=22%  Similarity=0.609  Sum_probs=24.5

Q ss_pred             CcccCC--cchHhhcChHHHHHHhhhcCC
Q psy4573         260 IPYHCE--FCSERFSTKALVRHHVRSHHS  286 (306)
Q Consensus       260 ~~~~C~--~C~~~f~~~~~l~~H~~~~h~  286 (306)
                      ++|.|.  .|++.|...+.|..|+++|++
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            468999  999999999999999998864

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.37  E-value=0.00025  Score=44.57  Aligned_cols=46  Identities=20%  Similarity=0.376  Sum_probs=21.9

Q ss_pred             ccCcCCChhHHHHHH-hhccCCC------cccCC--cchHhhcChHHHHHHhhhc
Q psy4573         239 CGKGFTQKQALNTHK-RGHTGEI------PYHCE--FCSERFSTKALVRHHVRSH  284 (306)
Q Consensus       239 C~~~f~~~~~L~~H~-~~h~~~~------~~~C~--~C~~~f~~~~~l~~H~~~~  284 (306)
                      |++.|.+...|..|+ ..|.+.+      .|.|.  .|+..+.....|..|++..
T Consensus         9 C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            9 CPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             CCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             CCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            455555555555554 2444333      45553  3555444445555555443

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=96.42  E-value=0.0018  Score=49.44  Aligned_cols=82  Identities=18%  Similarity=0.323  Sum_probs=57.8

Q ss_pred             ceecc--ccccccCChHHHHHHHhhccCCCCcccCcCCCccCCcHHHHHHHHHccCCCCcccCcccCcCCChhHHHHHHh
Q psy4573         177 KFECE--VCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKR  254 (306)
Q Consensus       177 ~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~  254 (306)
                      ...|+  -|+..+. ...+..|+.. -...++.|+.|+..+ ....|..|+...-..++..|+.|+..+ ....|..|..
T Consensus        82 ~v~C~n~GC~~~~~-~~~l~~H~~~-C~~~~v~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~-~~~~l~~H~~  157 (170)
T 3hcs_A           82 MVKCPNEGCLHKME-LRHLEDHQAH-CEFALMDCPQCQRPF-QKFHINIHILKDCPRRQVSCDNCAASM-AFEDKEIHDQ  157 (170)
T ss_dssp             EEECCSTTCCCEEE-GGGHHHHHTT-CTTSEEECTTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEE-EGGGHHHHHT
T ss_pred             ccCCCCCCCCceec-HhHHHHHHhc-CCceeeECCCCChHH-HHHHHHHHhhhhCCCCCeECCCCCCcc-CHHHHHhHHH
Confidence            45663  5766554 4457788732 334567899999888 567789998877778888899998876 6677899998


Q ss_pred             hccCCCcc
Q psy4573         255 GHTGEIPY  262 (306)
Q Consensus       255 ~h~~~~~~  262 (306)
                      .+.|..++
T Consensus       158 ~~~~~~~~  165 (170)
T 3hcs_A          158 NCPLALEH  165 (170)
T ss_dssp             TCCC----
T ss_pred             hCcChhhh
Confidence            88877543

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.14  E-value=0.00089  Score=48.42  Aligned_cols=21  Identities=24%  Similarity=0.515  Sum_probs=15.5

Q ss_pred             ceeccccccccCChHHHHHHH
Q psy4573         177 KFECEVCHRKLSTKNHLRLHM  197 (306)
Q Consensus       177 ~~~C~~C~~~f~~~~~l~~H~  197 (306)
                      ++.|.+|+..|.+...+..|.
T Consensus        32 ~~~C~~C~v~~~S~s~~~~H~   52 (127)
T 1zu1_A           32 DTQCKVCSAVLISESQKLAHY   52 (127)
T ss_dssp             SSEETTTTEECCSHHHHHHHH
T ss_pred             CCcCcCCCCEeCCHHHHHHHH
Confidence            567777777777777777776

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=96.00  E-value=0.01  Score=45.24  Aligned_cols=82  Identities=17%  Similarity=0.209  Sum_probs=59.0

Q ss_pred             CCccc--CcCCCccCCcHHHHHHHHHccCCCCcccCcccCcCCChhHHHHHHhhccCCCcccCCcchHhhcChHHHHHHh
Q psy4573         204 RPAVC--SYCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTKALVRHHV  281 (306)
Q Consensus       204 ~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~  281 (306)
                      -...|  ..|+..+. ...+..|+.. =.-+++.|+.|+..+ ....|..|+...-..++..|+.|+..+. ...|..|.
T Consensus        81 l~v~C~n~GC~~~~~-~~~l~~H~~~-C~~~~v~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~~-~~~l~~H~  156 (170)
T 3hcs_A           81 LMVKCPNEGCLHKME-LRHLEDHQAH-CEFALMDCPQCQRPF-QKFHINIHILKDCPRRQVSCDNCAASMA-FEDKEIHD  156 (170)
T ss_dssp             SEEECCSTTCCCEEE-GGGHHHHHTT-CTTSEEECTTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEEE-GGGHHHHH
T ss_pred             cccCCCCCCCCceec-HhHHHHHHhc-CCceeeECCCCChHH-HHHHHHHHhhhhCCCCCeECCCCCCccC-HHHHHhHH
Confidence            34566  45776654 5567788743 334677899999877 7888999998888888888999998874 45688998


Q ss_pred             hhcCCCCC
Q psy4573         282 RSHHSSAR  289 (306)
Q Consensus       282 ~~~h~~~~  289 (306)
                      ..+.|+..
T Consensus       157 ~~~~~~~~  164 (170)
T 3hcs_A          157 QNCPLALE  164 (170)
T ss_dssp             TTCCC---
T ss_pred             HhCcChhh
Confidence            88877654

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=95.99  E-value=0.0011  Score=47.87  Aligned_cols=77  Identities=18%  Similarity=0.306  Sum_probs=51.4

Q ss_pred             CCCcccCcCCCccCCcHHHHHHH--HHccCC-CCcccCcc------cCcCCChhHHHHHHhhccCCCcccCCcchHhhcC
Q psy4573         203 ERPAVCSYCGKGFRRGDALTEHI--RIHTGQ-RPYVCEIC------GKGFTQKQALNTHKRGHTGEIPYHCEFCSERFST  273 (306)
Q Consensus       203 ~~~~~C~~C~~~f~~~~~l~~H~--~~h~~~-~~~~C~~C------~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~  273 (306)
                      .+++.|.+|+..|.+.+.+..|.  +.|... +.+.+...      +..+....    +...+.+...|.|.+|+..|.+
T Consensus        30 ~~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~C~~C~~~f~s  105 (127)
T 1zu1_A           30 FSDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAP----AEISDGEDRSKCCPVCNMTFSS  105 (127)
T ss_dssp             BCSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCS----SCCSSCCCTTTEETTTTEECSS
T ss_pred             CCCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCc----cccccCCCCCeEcCCCCCEeCC
Confidence            46789999999999999999998  455322 22322110      12222111    2234556777899999999999


Q ss_pred             hHHHHHHhhh
Q psy4573         274 KALVRHHVRS  283 (306)
Q Consensus       274 ~~~l~~H~~~  283 (306)
                      ...|..|+..
T Consensus       106 ~~~~~~H~~g  115 (127)
T 1zu1_A          106 PVVAESHYIG  115 (127)
T ss_dssp             HHHHHHHHTS
T ss_pred             HHHHHHHHCC
Confidence            9999999753

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=95.79  E-value=0.0023  Score=45.52  Aligned_cols=30  Identities=27%  Similarity=0.361  Sum_probs=20.7

Q ss_pred             HHccCCCCcccCcccCcCCChhHHHHHHhh
Q psy4573         226 RIHTGQRPYVCEICGKGFTQKQALNTHKRG  255 (306)
Q Consensus       226 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~  255 (306)
                      ..|+|+++|.|..|++.|.+...|..|+++
T Consensus        43 ed~tGekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           43 PDLPGGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SSSGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             ccCCCCcceEcccCcchhCCHHHHHHHHhh
Confidence            345666777777777777777777777654

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=95.40  E-value=0.003  Score=44.90  Aligned_cols=33  Identities=21%  Similarity=0.340  Sum_probs=29.1

Q ss_pred             HHhhccCCCcccCCcchHhhcChHHHHHHhhhc
Q psy4573         252 HKRGHTGEIPYHCEFCSERFSTKALVRHHVRSH  284 (306)
Q Consensus       252 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~  284 (306)
                      +...|.|+++|.|..|++.|.+...|..|+++.
T Consensus        41 ~ded~tGekpfyC~~C~K~F~~~~~L~~H~rsK   73 (124)
T 1zr9_A           41 FDPDLPGGGLHRCLACARYFIDSTNLKTHFRSK   73 (124)
T ss_dssp             SCSSSGGGGCSEETTTTEECSSHHHHHHHTTCH
T ss_pred             ccccCCCCcceEcccCcchhCCHHHHHHHHhhh
Confidence            345688999999999999999999999998763

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=94.82  E-value=0.018  Score=32.67  Aligned_cols=23  Identities=26%  Similarity=0.424  Sum_probs=21.4

Q ss_pred             cceeccccccccCChHHHHHHHh
Q psy4573         176 IKFECEVCHRKLSTKNHLRLHMR  198 (306)
Q Consensus       176 ~~~~C~~C~~~f~~~~~l~~H~~  198 (306)
                      ..|.|+.|+..|.....|+.|++
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhh
Confidence            57999999999999999999997

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=94.48  E-value=0.021  Score=32.41  Aligned_cols=21  Identities=24%  Similarity=0.534  Sum_probs=10.7

Q ss_pred             ccCCcchHhhcChHHHHHHhh
Q psy4573         262 YHCEFCSERFSTKALVRHHVR  282 (306)
Q Consensus       262 ~~C~~C~~~f~~~~~l~~H~~  282 (306)
                      |.|+.|+..|.....|+.||+
T Consensus        13 ~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           13 KICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             CCCTTTCCCCSSHHHHHHHHH
T ss_pred             eeCCcccccccchHHHHhhhh
Confidence            445555555555555555544

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=92.81  E-value=0.046  Score=29.01  Aligned_cols=27  Identities=15%  Similarity=0.401  Sum_probs=18.6

Q ss_pred             cccCCcchHhhcChHHHHHHhhhcCCC
Q psy4573         261 PYHCEFCSERFSTKALVRHHVRSHHSS  287 (306)
Q Consensus       261 ~~~C~~C~~~f~~~~~l~~H~~~~h~~  287 (306)
                      .|.|++|-+.|.+...|..|....|..
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H~~   31 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVHDA   31 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHTSS
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhcccc
Confidence            367777777777777777777666654

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=89.70  E-value=0.2  Score=26.54  Aligned_cols=21  Identities=24%  Similarity=0.569  Sum_probs=13.0

Q ss_pred             cccCcccCcCCChhHHHHHHh
Q psy4573         234 YVCEICGKGFTQKQALNTHKR  254 (306)
Q Consensus       234 ~~C~~C~~~f~~~~~L~~H~~  254 (306)
                      |.|++|.+.|.+...|..|-.
T Consensus         6 FiCP~C~~~l~s~~~L~~Hye   26 (34)
T 3mjh_B            6 FICPQCMKSLGSADELFKHYE   26 (34)
T ss_dssp             EECTTTCCEESSHHHHHHHHH
T ss_pred             cCCcHHHHHcCCHHHHHHHHH
Confidence            566666666666666666654

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=88.95  E-value=0.19  Score=32.22  Aligned_cols=49  Identities=18%  Similarity=0.366  Sum_probs=38.3

Q ss_pred             CCcccccccccccCChHHHHHHhhhcCCCCceecccchhccCChHHHhhhh
Q psy4573          41 DGSLACNVCSKRCGSKSGLKIHMKSHTLSKRYACSICLAEFHTLTEKDRHT   91 (306)
Q Consensus        41 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~~~~~~~l~~H~   91 (306)
                      .-.|.|..|+.+.. +..+..|.....+...|.|.-|+..|.. ..+..|.
T Consensus         8 MV~F~C~~Cgd~lK-K~kv~~H~~~Cr~~~~~SCIDC~~~F~~-~~y~~Ht   56 (79)
T 1wjv_A            8 MVFFTCNACGESVK-KIQVEKHVSNCRNCECLSCIDCGKDFWG-DDYKSHV   56 (79)
T ss_dssp             CCEEEESSSCCEEE-TTHHHHHHHHCTTCCEEEETTTTEEEEG-GGTTTCC
T ss_pred             eeEEEcCCCCCeee-cccchhHHhhCCCCCcEEecccCCeeCC-CCEeCEe
Confidence            34589999998886 7788999877777668999999999975 5556564

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=86.46  E-value=0.78  Score=24.37  Aligned_cols=23  Identities=22%  Similarity=0.436  Sum_probs=14.3

Q ss_pred             CCcccCcccCcCCChhHHHHHHh
Q psy4573         232 RPYVCEICGKGFTQKQALNTHKR  254 (306)
Q Consensus       232 ~~~~C~~C~~~f~~~~~L~~H~~  254 (306)
                      ..+.|..|+..|.....+..|.+
T Consensus         7 ~~~~C~~C~IsF~~l~ty~aHKk   29 (36)
T 1fu9_A            7 MKKYCSTCDISFNYVKTYLAHKQ   29 (36)
T ss_dssp             CCSEETTTTEECSSHHHHHHHHH
T ss_pred             CcCeeccccceehhhHHHhhhhe
Confidence            34566666666666666666655

>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}

Probab=84.24  E-value=0.088  Score=33.55  Aligned_cols=21  Identities=14%  Similarity=0.376  Sum_probs=12.5

Q ss_pred             ceeccccccccCChHHHHHHH
Q psy4573         177 KFECEVCHRKLSTKNHLRLHM  197 (306)
Q Consensus       177 ~~~C~~C~~~f~~~~~l~~H~  197 (306)
                      .-+||+||........+.+.+
T Consensus         8 ~~~~PlCG~~L~W~eLIeQML   28 (95)
T 2k5c_A            8 MAKCPICGSPLKWEELIEEML   28 (95)
T ss_dssp             CEECSSSCCEECHHHHHHHST
T ss_pred             cccCCcCCCccCHHHHHHHHH
Confidence            356777777766665444433

>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}

Probab=83.75  E-value=0.51  Score=30.12  Aligned_cols=48  Identities=23%  Similarity=0.451  Sum_probs=27.3

Q ss_pred             CCccc-CcccCcCCChhHHHHHHhhccCCCcccCCcchHhhcChHHHHHHh
Q psy4573         232 RPYVC-EICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTKALVRHHV  281 (306)
Q Consensus       232 ~~~~C-~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~  281 (306)
                      .+..| ..|+..+ .+..|..|+...-..++..|.+|+..|. ...|..|.
T Consensus        15 ~~v~C~~~C~~~v-~r~~l~~H~~~~C~~r~v~C~~C~~~~~-~~~l~~H~   63 (76)
T 2yuc_A           15 NVIPCPNRCPMKL-SRRDLPAHLQHDCPKRRLKCEFCGCDFS-GEAYESHE   63 (76)
T ss_dssp             SCCBCTTCCSCBC-CSSSSTTTTTTSCTTSCCCCSSSCCCCC-HHHHHHTT
T ss_pred             cccCCCccccHHh-hHhHHHhhCHhhCCCcceECCCCCCccC-HHHHHHHH
Confidence            34456 3566554 3455666665555556666777776664 34456665

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=82.20  E-value=1.5  Score=23.25  Aligned_cols=25  Identities=12%  Similarity=0.094  Sum_probs=17.2

Q ss_pred             CCcccccccccccCChHHHHHHhhh
Q psy4573          41 DGSLACNVCSKRCGSKSGLKIHMKS   65 (306)
Q Consensus        41 ~~~~~C~~C~~~f~~~~~l~~H~~~   65 (306)
                      ...+.|..|+-.|.+...+..|.+-
T Consensus         6 ~~~~~C~~C~IsF~~l~ty~aHKk~   30 (36)
T 1fu9_A            6 VMKKYCSTCDISFNYVKTYLAHKQF   30 (36)
T ss_dssp             CCCSEETTTTEECSSHHHHHHHHHH
T ss_pred             cCcCeeccccceehhhHHHhhhhee
Confidence            4456677777777777777777653

>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A

Probab=81.87  E-value=1.2  Score=22.28  Aligned_cols=22  Identities=23%  Similarity=0.608  Sum_probs=17.7

Q ss_pred             ceeccccccccCChHHHHHHHh
Q psy4573         177 KFECEVCHRKLSTKNHLRLHMR  198 (306)
Q Consensus       177 ~~~C~~C~~~f~~~~~l~~H~~  198 (306)
                      .|.|+.|....++...|..|..
T Consensus         3 k~~CpvCk~q~Pd~kt~~~H~e   24 (28)
T 2jvx_A            3 DFCCPKCQYQAPDMDTLQIHVM   24 (28)
T ss_dssp             CEECTTSSCEESSHHHHHHHHH
T ss_pred             cccCccccccCcChHHHHHHHH
Confidence            4778888888888888888864

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=80.14  E-value=0.7  Score=23.62  Aligned_cols=23  Identities=35%  Similarity=0.899  Sum_probs=15.4

Q ss_pred             cCCcchHhhcChHHHHHHhhhcC
Q psy4573         263 HCEFCSERFSTKALVRHHVRSHH  285 (306)
Q Consensus       263 ~C~~C~~~f~~~~~l~~H~~~~h  285 (306)
                      .|..|.+.+++..+|..|++.-|
T Consensus        11 hcrfckkkysdvknlikhire~h   33 (37)
T 2elu_A           11 HCRFCKKKYSDVKNLIKHIRDAH   33 (37)
T ss_dssp             EETTTTEECSSHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhc
Confidence            46667777777777777766554

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	306
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	2e-09
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	2e-06
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	0.002
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	3e-08
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	5e-06
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	3e-04
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	0.004
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	9e-08
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	5e-05
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	3e-04
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	2e-07
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	5e-07
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	2e-07
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	5e-06
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	0.002
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	6e-07
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	5e-06
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	7e-04
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	2e-06
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	2e-04
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	0.001
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	3e-06
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	5e-06
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	0.001
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	4e-06
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	8e-06
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	3e-05
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	4e-06
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	6e-05
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	0.002
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	2e-05
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	4e-05
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	6e-05
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	0.001
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	0.003
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	1e-04
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	0.002
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	2e-04
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	0.002
d1x6ea2	26	g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (	3e-04
d1x6ea2	26	g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (	0.003
d1ubdc3	30	g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger	5e-04
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	0.001
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	0.003
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	0.002
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	0.002
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	0.003
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	0.004

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.3 bits (121), Expect = 2e-09
 Identities = 17/33 (51%), Positives = 23/33 (69%)

Query: 227 IHTGQRPYVCEICGKGFTQKQALNTHKRGHTGE 259
           IH+G++PY C  CGK F++   L  H+R HTGE
Sbjct: 1   IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE 33

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.8 bits (99), Expect = 2e-06
 Identities = 15/31 (48%), Positives = 19/31 (61%)

Query: 200 HTNERPAVCSYCGKGFRRGDALTEHIRIHTG 230
           H+ E+P  C  CGK F R   L +H R+HTG
Sbjct: 2   HSGEKPYGCVECGKAFSRSSILVQHQRVHTG 32

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.0 bits (76), Expect = 0.002
 Identities = 12/29 (41%), Positives = 17/29 (58%)

Query: 256 HTGEIPYHCEFCSERFSTKALVRHHVRSH 284
           H+GE PY C  C + FS  +++  H R H
Sbjct: 2   HSGEKPYGCVECGKAFSRSSILVQHQRVH 30

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.6 bits (111), Expect = 3e-08
 Identities = 15/34 (44%), Positives = 20/34 (58%)

Query: 226 RIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGE 259
           R HTG++PY C  C K F QKQ L+ H + +   
Sbjct: 1   RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP 34

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.4 bits (95), Expect = 5e-06
 Identities = 14/33 (42%), Positives = 19/33 (57%)

Query: 198 RTHTNERPAVCSYCGKGFRRGDALTEHIRIHTG 230
           RTHT E+P  CS+C K FR+   L  H + +  
Sbjct: 1   RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHD 33

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.4 bits (82), Expect = 3e-04
 Identities = 14/32 (43%), Positives = 18/32 (56%)

Query: 254 RGHTGEIPYHCEFCSERFSTKALVRHHVRSHH 285
           R HTGE PY C  C + F  K L+  H + +H
Sbjct: 1   RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYH 32

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.3 bits (74), Expect = 0.004
 Identities = 9/33 (27%), Positives = 15/33 (45%), Gaps = 1/33 (3%)

Query: 172 THLGIK-FECEVCHRKLSTKNHLRLHMRTHTNE 203
           TH G K + C  C +    K  L +H + + + 
Sbjct: 2   THTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP 34

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.4 bits (108), Expect = 9e-08
 Identities = 13/34 (38%), Positives = 17/34 (50%)

Query: 226 RIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGE 259
           R H+G++PY C IC   FTQ   +  H      E
Sbjct: 1   RTHSGEKPYECYICHARFTQSGTMKMHILQKHTE 34

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.7 bits (88), Expect = 5e-05
 Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 1/34 (2%)

Query: 198 RTHTNERPAVCSYCGKGFRRGDALTEHI-RIHTG 230
           RTH+ E+P  C  C   F +   +  HI + HT 
Sbjct: 1   RTHSGEKPYECYICHARFTQSGTMKMHILQKHTE 34

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.3 bits (82), Expect = 3e-04
 Identities = 12/33 (36%), Positives = 18/33 (54%)

Query: 254 RGHTGEIPYHCEFCSERFSTKALVRHHVRSHHS 286
           R H+GE PY C  C  RF+    ++ H+   H+
Sbjct: 1   RTHSGEKPYECYICHARFTQSGTMKMHILQKHT 33

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.6 bits (106), Expect = 2e-07
 Identities = 17/38 (44%), Positives = 26/38 (68%), Gaps = 1/38 (2%)

Query: 229 TGQRPYVCEICGKGFTQKQALNTH-KRGHTGEIPYHCE 265
           +  +PY+C+ CGKGF++   LN H K+ HT E P+ C+
Sbjct: 1   SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ 38

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.4 bits (103), Expect = 5e-07
 Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%)

Query: 203 ERPAVCSYCGKGFRRGDALTEHIR-IHTGQRPYVCEI 238
            +P +C  CGKGF R D L  HI+ +HT +RP+ C++
Sbjct: 3   GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.4 bits (105), Expect = 2e-07
 Identities = 14/36 (38%), Positives = 19/36 (52%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGE 259
                  +R Y C+ CGK F+    L+ H+R HTGE
Sbjct: 3   SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE 38

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.5 bits (95), Expect = 5e-06
 Identities = 12/35 (34%), Positives = 14/35 (40%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTG 230
                   R   C  CGK F     L++H R HTG
Sbjct: 3   SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG 37

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.2 bits (76), Expect = 0.002
 Identities = 8/33 (24%), Positives = 14/33 (42%)

Query: 252 HKRGHTGEIPYHCEFCSERFSTKALVRHHVRSH 284
            +        Y C+ C + FS  + +  H R+H
Sbjct: 3   SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTH 35

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 43.2 bits (102), Expect = 6e-07
 Identities = 10/35 (28%), Positives = 17/35 (48%)

Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTG 258
             R  TG +P+ C  C + F++   L  H++ H  
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML 36

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 40.5 bits (95), Expect = 5e-06
 Identities = 11/35 (31%), Positives = 14/35 (40%)

Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTG 230
             R  T  +P  C  C + F R D L  H + H  
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML 36

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 34.3 bits (79), Expect = 7e-04
 Identities = 11/33 (33%), Positives = 14/33 (42%)

Query: 252 HKRGHTGEIPYHCEFCSERFSTKALVRHHVRSH 284
             RG TG  P+ C  C   FS    +  H + H
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 42.1 bits (99), Expect = 2e-06
 Identities = 13/33 (39%), Positives = 18/33 (54%)

Query: 228 HTGQRPYVCEICGKGFTQKQALNTHKRGHTGEI 260
            +G+RP+VC IC   FT K     H + HT  +
Sbjct: 2   SSGKRPFVCRICLSAFTTKANCARHLKVHTDTL 34

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.3 bits (84), Expect = 2e-04
 Identities = 9/31 (29%), Positives = 14/31 (45%)

Query: 200 HTNERPAVCSYCGKGFRRGDALTEHIRIHTG 230
            + +RP VC  C   F        H+++HT 
Sbjct: 2   SSGKRPFVCRICLSAFTTKANCARHLKVHTD 32

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 33.6 bits (77), Expect = 0.001
 Identities = 11/33 (33%), Positives = 18/33 (54%)

Query: 255 GHTGEIPYHCEFCSERFSTKALVRHHVRSHHSS 287
           G +G+ P+ C  C   F+TKA    H++ H  +
Sbjct: 1   GSSGKRPFVCRICLSAFTTKANCARHLKVHTDT 33

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.2 bits (97), Expect = 3e-06
 Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 2/35 (5%)

Query: 234 YVCE--ICGKGFTQKQALNTHKRGHTGEIPYHCEF 266
           + C    CGK F  K+ L  H + H+    Y CEF
Sbjct: 2   FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF 36

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.5 bits (95), Expect = 5e-06
 Identities = 12/30 (40%), Positives = 17/30 (56%)

Query: 208 CSYCGKGFRRGDALTEHIRIHTGQRPYVCE 237
              CGK F     L EH+++H+  R Y+CE
Sbjct: 6   EPACGKSFNFKKHLKEHMKLHSDTRDYICE 35

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.5 bits (77), Expect = 0.001
 Identities = 9/32 (28%), Positives = 17/32 (53%)

Query: 179 ECEVCHRKLSTKNHLRLHMRTHTNERPAVCSY 210
               C +  + K HL+ HM+ H++ R  +C +
Sbjct: 5   PEPACGKSFNFKKHLKEHMKLHSDTRDYICEF 36

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.2 bits (96), Expect = 4e-06
 Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 1/54 (1%)

Query: 203 ERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGH 256
           ++   C  CGK F        H+ +H G RPY C +CGK F  K  L  H + H
Sbjct: 1   DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.4 bits (94), Expect = 8e-06
 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%)

Query: 232 RPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTKALVRHHVRSH 284
           + Y C+ CGK FT K   + H   H G  PY C  C ++F  K  +  H++ H
Sbjct: 2   KLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.5 bits (89), Expect = 3e-05
 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)

Query: 178 FECEVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIH 228
           + C+ C +  + K+    HM  H   RP  C  CGK F+    L  H++IH
Sbjct: 4   YPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 40.3 bits (95), Expect = 4e-06
 Identities = 12/28 (42%), Positives = 18/28 (64%)

Query: 232 RPYVCEICGKGFTQKQALNTHKRGHTGE 259
           R +VCE+C + F +++ L  H R HT E
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNE 28

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 37.2 bits (87), Expect = 6e-05
 Identities = 11/29 (37%), Positives = 15/29 (51%)

Query: 204 RPAVCSYCGKGFRRGDALTEHIRIHTGQR 232
           R  VC  C + F R + L  H R HT ++
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 33.0 bits (76), Expect = 0.002
 Identities = 14/27 (51%), Positives = 19/27 (70%)

Query: 178 FECEVCHRKLSTKNHLRLHMRTHTNER 204
           F CEVC R  + + HL+ H R+HTNE+
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSHTNEK 29

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.7 bits (91), Expect = 2e-05
 Identities = 13/28 (46%), Positives = 18/28 (64%)

Query: 231 QRPYVCEICGKGFTQKQALNTHKRGHTG 258
           Q+P+ C IC + F++   L TH R HTG
Sbjct: 1   QKPFQCRICMRNFSRSDHLTTHIRTHTG 28

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.0 bits (89), Expect = 4e-05
 Identities = 14/28 (50%), Positives = 17/28 (60%)

Query: 203 ERPAVCSYCGKGFRRGDALTEHIRIHTG 230
           ++P  C  C + F R D LT HIR HTG
Sbjct: 1   QKPFQCRICMRNFSRSDHLTTHIRTHTG 28

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.3 bits (87), Expect = 6e-05
 Identities = 7/28 (25%), Positives = 13/28 (46%)

Query: 232 RPYVCEICGKGFTQKQALNTHKRGHTGE 259
           + + C  C K F +   L+ H + H  +
Sbjct: 1   KKFACPECPKRFMRSDHLSKHIKTHQNK 28

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.5 bits (77), Expect = 0.001
 Identities = 10/29 (34%), Positives = 16/29 (55%)

Query: 204 RPAVCSYCGKGFRRGDALTEHIRIHTGQR 232
           +   C  C K F R D L++HI+ H  ++
Sbjct: 1   KKFACPECPKRFMRSDHLSKHIKTHQNKK 29

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.3 bits (74), Expect = 0.003
 Identities = 9/27 (33%), Positives = 16/27 (59%)

Query: 178 FECEVCHRKLSTKNHLRLHMRTHTNER 204
           F C  C ++    +HL  H++TH N++
Sbjct: 3   FACPECPKRFMRSDHLSKHIKTHQNKK 29

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.5 bits (85), Expect = 1e-04
 Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 2/30 (6%)

Query: 232 RPYVC--EICGKGFTQKQALNTHKRGHTGE 259
           +P+ C  E C K +++ + L TH R HTGE
Sbjct: 1   KPHKCTFEGCRKSYSRLENLKTHLRSHTGE 30

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.7 bits (75), Expect = 0.002
 Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 2/30 (6%)

Query: 204 RPAVCSY--CGKGFRRGDALTEHIRIHTGQ 231
           +P  C++  C K + R + L  H+R HTG+
Sbjct: 1   KPHKCTFEGCRKSYSRLENLKTHLRSHTGE 30

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.8 bits (83), Expect = 2e-04
 Identities = 16/30 (53%), Positives = 19/30 (63%), Gaps = 2/30 (6%)

Query: 232 RPYVC--EICGKGFTQKQALNTHKRGHTGE 259
           RP++C    CGK FT+   L  HKR HTGE
Sbjct: 1   RPFMCTWSYCGKRFTRSDELQRHKRTHTGE 30

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.1 bits (76), Expect = 0.002
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 2/31 (6%)

Query: 204 RPAVCSY--CGKGFRRGDALTEHIRIHTGQR 232
           RP +C++  CGK F R D L  H R HTG++
Sbjct: 1   RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.3 bits (82), Expect = 3e-04
 Identities = 13/26 (50%), Positives = 16/26 (61%)

Query: 232 RPYVCEICGKGFTQKQALNTHKRGHT 257
           +PY C  CGK F+Q   L  H+R HT
Sbjct: 1   KPYKCLECGKAFSQNSGLINHQRIHT 26

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.2 bits (74), Expect = 0.003
 Identities = 12/26 (46%), Positives = 14/26 (53%)

Query: 204 RPAVCSYCGKGFRRGDALTEHIRIHT 229
           +P  C  CGK F +   L  H RIHT
Sbjct: 1   KPYKCLECGKAFSQNSGLINHQRIHT 26

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.7 bits (80), Expect = 5e-04
 Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 2/30 (6%)

Query: 232 RPYVCEI--CGKGFTQKQALNTHKRGHTGE 259
           +P+ C    CGK F+    L TH R HTG+
Sbjct: 1   KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 30

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 33.5 bits (77), Expect = 0.001
 Identities = 10/31 (32%), Positives = 14/31 (45%), Gaps = 2/31 (6%)

Query: 203 ERPAVCSY--CGKGFRRGDALTEHIRIHTGQ 231
           +RP  C +  C K F R   L  H + H  +
Sbjct: 1   DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 32.7 bits (75), Expect = 0.003
 Identities = 11/30 (36%), Positives = 14/30 (46%), Gaps = 2/30 (6%)

Query: 232 RPYVC--EICGKGFTQKQALNTHKRGHTGE 259
           RPY C    C K F +   L  HK+ H  +
Sbjct: 2   RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 33.4 bits (77), Expect = 0.002
 Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 2/29 (6%)

Query: 232 RPYVC--EICGKGFTQKQALNTHKRGHTG 258
           RPY C  E C + F++   L  H R HTG
Sbjct: 1   RPYACPVESCDRRFSRSADLTRHIRIHTG 29

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 33.1 bits (76), Expect = 0.002
 Identities = 15/29 (51%), Positives = 16/29 (55%), Gaps = 2/29 (6%)

Query: 204 RPAVCSY--CGKGFRRGDALTEHIRIHTG 230
           RP  C    C + F R   LT HIRIHTG
Sbjct: 1   RPYACPVESCDRRFSRSADLTRHIRIHTG 29

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 33.0 bits (75), Expect = 0.003
 Identities = 5/39 (12%), Positives = 14/39 (35%), Gaps = 2/39 (5%)

Query: 223 EHIRIHTGQRPYVCEICGKG--FTQKQALNTHKRGHTGE 259
           +        + + C   G    F ++  + +H + H  +
Sbjct: 8   DKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED 46

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 32.6 bits (74), Expect = 0.004
 Identities = 8/45 (17%), Positives = 19/45 (42%), Gaps = 3/45 (6%)

Query: 190 KNHLRLHMRTHTNERPAVCSYCGKG--FRRGDALTEHIRIHTGQR 232
           +  +  +++    ++   C + G    F+R   +  HI+ H   R
Sbjct: 4   RGSIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	306
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.6
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.6
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.13
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.12
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.12
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.12
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.06
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.04
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.03
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.98
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.96
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.96
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.94
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.93
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.91
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.89
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.86
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.86
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.84
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.78
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.76
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.75
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.74
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.71
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.69
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.66
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.63
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.58
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.56
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.51
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.47
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.45
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.38
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.35
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.3
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.27
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.23
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.21
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.11
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.09
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.08
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.0
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.97
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.96
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.96
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.91
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.87
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.85
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.85
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.78
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.73
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.71
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.58
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.5
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.48
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.45
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.42
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.39
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.37
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.32
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.26
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.25
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.23
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.18
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.15
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.14
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.12
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.09
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.06
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	96.97
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.8
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.79
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	96.78
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	96.68
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.58
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	96.55
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	96.55
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.35
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.33
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.3
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.21
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.17
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.13
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	95.98
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.84
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.65
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.5
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.42
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	95.36
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	95.21
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.1
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.01
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	94.95
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	94.95
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	94.93
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	94.79
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	94.38
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	93.82
d1y0jb1	36	U-shaped transcription factor, different fingers {	93.67
d1y0jb1	36	U-shaped transcription factor, different fingers {	93.42
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	92.79
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	92.02
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	91.7
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	91.26
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	91.08
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	90.95
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	90.61
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	89.94
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	89.74
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	89.54
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	89.39
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	89.29
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	88.93
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	88.34
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	88.08
d1nnqa2	37	Rubrerythrin, C-terminal domain {Archaeon Pyrococc	87.73
d1yuza2	36	Nigerythrin, C-terminal domain {Desulfovibrio vulg	87.66
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	87.11
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	86.16
d2ghfa2	36	Zinc fingers and homeoboxes protein 1, ZHX1 {Human	85.26
d2ghfa2	36	Zinc fingers and homeoboxes protein 1, ZHX1 {Human	84.54
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	84.48
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	82.5
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	81.36
d2ctda1	53	Zinc finger protein 512, ZNF512 {Human (Homo sapie	80.22

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=3.6e-16  Score=94.62  Aligned_cols=51  Identities=37%  Similarity=0.766  Sum_probs=25.2

Q ss_pred             CCcccCcCCCccCCcHHHHHHHHHccCCCCcccCcccCcCCChhHHHHHHhh
Q psy4573         204 RPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRG  255 (306)
Q Consensus       204 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~  255 (306)
                      +||.| .||+.|.....|..|+++|++++||.|++||+.|...+.|..|+++
T Consensus         2 K~y~C-~Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~   52 (53)
T d2csha1           2 KLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKI   52 (53)
T ss_dssp             CCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTT
T ss_pred             cCCCC-CCCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhc
Confidence            44455 2555555555555555555555555555555555555555555444

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=2.1e-16  Score=95.66  Aligned_cols=53  Identities=36%  Similarity=0.753  Sum_probs=51.0

Q ss_pred             CCCcccCcccCcCCChhHHHHHHhhccCCCcccCCcchHhhcChHHHHHHhhhc
Q psy4573         231 QRPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTKALVRHHVRSH  284 (306)
Q Consensus       231 ~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~  284 (306)
                      ++||.| .||+.|.....|..|+++|.+++||.|.+|+++|...+.|..|+++|
T Consensus         1 EK~y~C-~Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCC-CCCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            589999 59999999999999999999999999999999999999999999876

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.13  E-value=1.5e-11  Score=67.34  Aligned_cols=35  Identities=46%  Similarity=1.030  Sum_probs=17.2

Q ss_pred             CCCcccCcccCcCCChhHHHHHHh-hccCCCcccCC
Q psy4573         231 QRPYVCEICGKGFTQKQALNTHKR-GHTGEIPYHCE  265 (306)
Q Consensus       231 ~~~~~C~~C~~~f~~~~~L~~H~~-~h~~~~~~~C~  265 (306)
                      ++||+|.+||+.|...+.|..|++ +|.+++||.|.
T Consensus         3 ~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCc
Confidence            344555555555555555555543 35555555543

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.12  E-value=5e-12  Score=69.51  Aligned_cols=35  Identities=37%  Similarity=0.767  Sum_probs=19.0

Q ss_pred             HHHHccCCCCcccCcccCcCCChhHHHHHHhhccC
Q psy4573         224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTG  258 (306)
Q Consensus       224 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  258 (306)
                      |+++|++++||.|++||++|...+.|..|+++|+|
T Consensus         3 H~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtG   37 (38)
T d2cota2           3 SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG   37 (38)
T ss_dssp             CCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCC
T ss_pred             cCcccCCCCCEecCCCCceeeCHHHHHHhCccCCC
Confidence            44455555555555555555555555555555554

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.12  E-value=1.5e-11  Score=64.64  Aligned_cols=33  Identities=52%  Similarity=1.031  Sum_probs=21.3

Q ss_pred             HccCCCCcccCcccCcCCChhHHHHHHhhccCC
Q psy4573         227 IHTGQRPYVCEICGKGFTQKQALNTHKRGHTGE  259 (306)
Q Consensus       227 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~  259 (306)
                      +|++++||+|.+||++|...+.|..|+++|+++
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            356666666666666666666666666666653

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.12  E-value=2.2e-11  Score=66.68  Aligned_cols=35  Identities=49%  Similarity=1.081  Sum_probs=21.7

Q ss_pred             CCCcccCcCCCccCCcHHHHHHHH-HccCCCCcccC
Q psy4573         203 ERPAVCSYCGKGFRRGDALTEHIR-IHTGQRPYVCE  237 (306)
Q Consensus       203 ~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~  237 (306)
                      ++||.|.+||+.|...+.|..|++ +|++++||+|.
T Consensus         3 ~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCc
Confidence            456666666666666666666654 46666666664

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.06  E-value=2.4e-11  Score=66.26  Aligned_cols=34  Identities=29%  Similarity=0.692  Sum_probs=19.4

Q ss_pred             HHHHccCCCCcccCcccCcCCChhHHHHHHhhcc
Q psy4573         224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHT  257 (306)
Q Consensus       224 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~  257 (306)
                      |.++|++++||+|++|++.|...+.|..|+++|.
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~   35 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGT
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCc
Confidence            3445555555555555555555555555555554

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.04  E-value=4.7e-11  Score=64.54  Aligned_cols=32  Identities=44%  Similarity=0.827  Sum_probs=16.5

Q ss_pred             HccCCCCcccCcccCcCCChhHHHHHHhhccC
Q psy4573         227 IHTGQRPYVCEICGKGFTQKQALNTHKRGHTG  258 (306)
Q Consensus       227 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  258 (306)
                      +|+|++||+|.+||++|...+.|..|+++|++
T Consensus         2 ~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~   33 (36)
T d1x6ha2           2 THTGEKPYACSHCDKTFRQKQLLDMHFKRYHD   33 (36)
T ss_dssp             TCCCCCCEECSSSSCEESSHHHHHHHHHHTTC
T ss_pred             CCCCCCCEECCCCCCCcCCHhHHHHhCcccCC
Confidence            34555555555555555555555555555444

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.03  E-value=1.9e-11  Score=67.15  Aligned_cols=37  Identities=22%  Similarity=0.469  Sum_probs=35.1

Q ss_pred             HHHhhccCCCcccCCcchHhhcChHHHHHHhhhcCCC
Q psy4573         251 THKRGHTGEIPYHCEFCSERFSTKALVRHHVRSHHSS  287 (306)
Q Consensus       251 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  287 (306)
                      +|+++|.+++||.|..|+++|...++|..|+++|+++
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            5889999999999999999999999999999999975

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.98  E-value=6.2e-11  Score=64.54  Aligned_cols=35  Identities=31%  Similarity=0.602  Sum_probs=32.9

Q ss_pred             HHhhccCCCcccCCcchHhhcChHHHHHHhhhcCC
Q psy4573         252 HKRGHTGEIPYHCEFCSERFSTKALVRHHVRSHHS  286 (306)
Q Consensus       252 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~  286 (306)
                      |.+.|++++||.|.+|+++|.+.++|..|+++|.+
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            67899999999999999999999999999999864

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.96  E-value=1.3e-10  Score=62.83  Aligned_cols=34  Identities=41%  Similarity=0.850  Sum_probs=32.1

Q ss_pred             hhccCCCcccCCcchHhhcChHHHHHHhhhcCCC
Q psy4573         254 RGHTGEIPYHCEFCSERFSTKALVRHHVRSHHSS  287 (306)
Q Consensus       254 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  287 (306)
                      ++|+|++||.|.+|+++|...+.|..|+++|+.+
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            5799999999999999999999999999999865

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.96  E-value=2.1e-10  Score=60.18  Aligned_cols=33  Identities=45%  Similarity=0.922  Sum_probs=28.5

Q ss_pred             hccCCCCcccCcCCCccCCcHHHHHHHHHccCC
Q psy4573         199 THTNERPAVCSYCGKGFRRGDALTEHIRIHTGQ  231 (306)
Q Consensus       199 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  231 (306)
                      +|++++||.|.+|+++|...+.|..|+++|+||
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            478889999999999999999999999988875

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.94  E-value=2.5e-10  Score=60.75  Aligned_cols=31  Identities=42%  Similarity=0.816  Sum_probs=16.0

Q ss_pred             ccCCCCcccCcccCcCCChhHHHHHHhhccC
Q psy4573         228 HTGQRPYVCEICGKGFTQKQALNTHKRGHTG  258 (306)
Q Consensus       228 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  258 (306)
                      |+|++||+|.+|++.|...+.|..|+++|.+
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~   32 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTD   32 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTS
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCC
Confidence            3455555555555555555555555555443

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.93  E-value=1.6e-10  Score=62.29  Aligned_cols=32  Identities=34%  Similarity=0.855  Sum_probs=16.9

Q ss_pred             hccCCCcccCCcchHhhcChHHHHHHhhhcCC
Q psy4573         255 GHTGEIPYHCEFCSERFSTKALVRHHVRSHHS  286 (306)
Q Consensus       255 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~  286 (306)
                      +|+|++||.|++|+++|++.++|..|++.+|+
T Consensus         2 ~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~   33 (36)
T d2ct1a2           2 THSGEKPYECYICHARFTQSGTMKMHILQKHT   33 (36)
T ss_dssp             CCSCCCSEECTTTCCEESCHHHHHHHHHHHSS
T ss_pred             ccCCCCCEeCCCCcccccchHHHHHHcccccC
Confidence            45555555555555555555555555544443

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.91  E-value=2.3e-10  Score=61.64  Aligned_cols=33  Identities=36%  Similarity=0.720  Sum_probs=22.4

Q ss_pred             HccCCCCcccCcccCcCCChhHHHHHHhhccCC
Q psy4573         227 IHTGQRPYVCEICGKGFTQKQALNTHKRGHTGE  259 (306)
Q Consensus       227 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~  259 (306)
                      +|+|++||+|++|++.|+..+.|..|++.++++
T Consensus         2 ~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           2 THSGEKPYECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCSCCCSEECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             ccCCCCCEeCCCCcccccchHHHHHHcccccCC
Confidence            567777777777777777777777776554443

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.89  E-value=4.7e-10  Score=57.09  Aligned_cols=28  Identities=43%  Similarity=0.987  Sum_probs=15.7

Q ss_pred             CCcccCcccCcCCChhHHHHHHhhccCC
Q psy4573         232 RPYVCEICGKGFTQKQALNTHKRGHTGE  259 (306)
Q Consensus       232 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~  259 (306)
                      +||.|++|++.|...+.|..|+++|+|+
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgE   28 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSS
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCC
Confidence            3555555555555555555555555554

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.86  E-value=7.6e-10  Score=56.18  Aligned_cols=28  Identities=25%  Similarity=0.642  Sum_probs=16.3

Q ss_pred             CCcccCcccCcCCChhHHHHHHhhccCC
Q psy4573         232 RPYVCEICGKGFTQKQALNTHKRGHTGE  259 (306)
Q Consensus       232 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~  259 (306)
                      +||.|++||+.|..++.|..|+++|.++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~Htge   28 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNK   28 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCc
Confidence            3555666666666666666666555554

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.86  E-value=3.9e-10  Score=56.66  Aligned_cols=26  Identities=42%  Similarity=0.949  Sum_probs=13.5

Q ss_pred             CCcccCcccCcCCChhHHHHHHhhcc
Q psy4573         232 RPYVCEICGKGFTQKQALNTHKRGHT  257 (306)
Q Consensus       232 ~~~~C~~C~~~f~~~~~L~~H~~~h~  257 (306)
                      +||+|++|++.|...+.|..|+++|+
T Consensus         2 KPy~C~~C~k~F~~~~~L~~H~r~HT   27 (28)
T d1a1ia2           2 KPFQCRICMRNFSRSDHLTTHIRTHT   27 (28)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHHHH
T ss_pred             cCccCCCCcCEecccccccccCCCcc
Confidence            45555555555555555555555544

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.84  E-value=7.1e-10  Score=58.95  Aligned_cols=33  Identities=30%  Similarity=0.696  Sum_probs=30.6

Q ss_pred             ccCCCcccCCcchHhhcChHHHHHHhhhcCCCC
Q psy4573         256 HTGEIPYHCEFCSERFSTKALVRHHVRSHHSSA  288 (306)
Q Consensus       256 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  288 (306)
                      |+|++||.|.+|++.|.+.++|.+|+++|....
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~~   34 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCcC
Confidence            689999999999999999999999999998653

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.78  E-value=6.2e-10  Score=55.91  Aligned_cols=28  Identities=29%  Similarity=0.795  Sum_probs=26.5

Q ss_pred             CCcccCCcchHhhcChHHHHHHhhhcCC
Q psy4573         259 EIPYHCEFCSERFSTKALVRHHVRSHHS  286 (306)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~  286 (306)
                      ++||.|++|+++|.+.+.|..|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            6899999999999999999999999975

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.76  E-value=2.6e-09  Score=54.29  Aligned_cols=27  Identities=37%  Similarity=0.753  Sum_probs=14.3

Q ss_pred             CcccCcCCCccCCcHHHHHHHHHccCC
Q psy4573         205 PAVCSYCGKGFRRGDALTEHIRIHTGQ  231 (306)
Q Consensus       205 ~~~C~~C~~~f~~~~~l~~H~~~h~~~  231 (306)
                      ||.|++|++.|...+.|..|+++|+|+
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~r~HTgE   28 (29)
T d2adra1           2 SFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTTSS
T ss_pred             cCCCCCCCCCCCCchHcccccCcccCC
Confidence            455555555555555555555555544

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.75  E-value=1.8e-09  Score=57.92  Aligned_cols=32  Identities=38%  Similarity=0.787  Sum_probs=17.3

Q ss_pred             cccCc--ccCcCCChhHHHHHHhhccCCCcccCC
Q psy4573         234 YVCEI--CGKGFTQKQALNTHKRGHTGEIPYHCE  265 (306)
Q Consensus       234 ~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~C~  265 (306)
                      |.|+.  |++.|.....|.+|+++|.+++||.|.
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            44543  555555555555555555555555554

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.74  E-value=4e-09  Score=53.45  Aligned_cols=28  Identities=36%  Similarity=0.740  Sum_probs=16.5

Q ss_pred             CCcccCcCCCccCCcHHHHHHHHHccCC
Q psy4573         204 RPAVCSYCGKGFRRGDALTEHIRIHTGQ  231 (306)
Q Consensus       204 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  231 (306)
                      +||.|++|++.|...+.|..|+++|+++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~Htge   28 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNK   28 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCc
Confidence            3555666666666666666666666554

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.71  E-value=2.1e-09  Score=52.46  Aligned_cols=25  Identities=48%  Similarity=0.963  Sum_probs=13.9

Q ss_pred             CCcccCcccCcCCChhHHHHHHhhc
Q psy4573         232 RPYVCEICGKGFTQKQALNTHKRGH  256 (306)
Q Consensus       232 ~~~~C~~C~~~f~~~~~L~~H~~~h  256 (306)
                      +||+|.+||++|...+.|..|+++|
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriH   25 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIH   25 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCC
Confidence            3555555555555555555555554

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.69  E-value=3.9e-10  Score=64.65  Aligned_cols=31  Identities=19%  Similarity=0.532  Sum_probs=13.2

Q ss_pred             ccCCCCcccCc--ccCcCCChhHHHHHHhhccC
Q psy4573         228 HTGQRPYVCEI--CGKGFTQKQALNTHKRGHTG  258 (306)
Q Consensus       228 h~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~  258 (306)
                      |.+++||+|++  |++.|...+.|..|+++|.+
T Consensus        13 h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htg   45 (47)
T d1ncsa_          13 EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLE   45 (47)
T ss_dssp             EETTTEEECCCTTCCCEECSSSSHHHHHHHHTT
T ss_pred             ccCCCCeECCcCCCCccccCchHHHhhcccccC
Confidence            44444444433  44444444444444444443

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.66  E-value=6.3e-09  Score=55.68  Aligned_cols=27  Identities=33%  Similarity=0.807  Sum_probs=14.2

Q ss_pred             cccccCChHHHHHHHhhccCCCCcccC
Q psy4573         183 CHRKLSTKNHLRLHMRTHTNERPAVCS  209 (306)
Q Consensus       183 C~~~f~~~~~l~~H~~~h~~~~~~~C~  209 (306)
                      |++.|.....|.+|+++|++++||.|.
T Consensus         9 C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           9 CGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             TCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             CCCeeCChhHhccccCeeCCCCCEeCC
Confidence            555555555555555555555555543

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.63  E-value=8.4e-10  Score=63.22  Aligned_cols=42  Identities=17%  Similarity=0.549  Sum_probs=37.1

Q ss_pred             hhHHHHHHhhccCCCcccCCc--chHhhcChHHHHHHhhhcCCCC
Q psy4573         246 KQALNTHKRGHTGEIPYHCEF--CSERFSTKALVRHHVRSHHSSA  288 (306)
Q Consensus       246 ~~~L~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~  288 (306)
                      ...|..|+. |.+++||.|.+  |+++|...+.|..|+++|++++
T Consensus         4 ~~~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           4 RGSIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             CSSGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             cchhcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            345677775 99999999987  9999999999999999999874

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.58  E-value=1.8e-08  Score=51.29  Aligned_cols=26  Identities=42%  Similarity=0.884  Sum_probs=13.7

Q ss_pred             CcccCc--ccCcCCChhHHHHHHhhccC
Q psy4573         233 PYVCEI--CGKGFTQKQALNTHKRGHTG  258 (306)
Q Consensus       233 ~~~C~~--C~~~f~~~~~L~~H~~~h~~  258 (306)
                      ||+|++  |++.|...+.|..|+++|+|
T Consensus         2 p~~C~~~gCgk~F~~~~~L~~H~r~HtG   29 (30)
T d2glia3           2 PHKCTFEGCRKSYSRLENLKTHLRSHTG   29 (30)
T ss_dssp             CCCCCSTTCCCCCSSHHHHHHHHHHTTT
T ss_pred             CeeCCCCCCCceECChhHhhhhcCcCcC
Confidence            455544  55555555555555555544

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.56  E-value=1.4e-08  Score=49.54  Aligned_cols=24  Identities=46%  Similarity=0.902  Sum_probs=12.0

Q ss_pred             CcccCcCCCccCCcHHHHHHHHHc
Q psy4573         205 PAVCSYCGKGFRRGDALTEHIRIH  228 (306)
Q Consensus       205 ~~~C~~C~~~f~~~~~l~~H~~~h  228 (306)
                      ||+|.+||+.|...+.|..|+++|
T Consensus         2 Py~C~eCgK~F~~~s~L~~HqriH   25 (26)
T d1x6ea2           2 PYKCLECGKAFSQNSGLINHQRIH   25 (26)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHH
T ss_pred             CccCCCCcCeeccCcccccCccCC
Confidence            445555555555555555555444

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.51  E-value=2e-08  Score=51.25  Aligned_cols=26  Identities=50%  Similarity=0.958  Sum_probs=13.9

Q ss_pred             CcccCc--ccCcCCChhHHHHHHhhccC
Q psy4573         233 PYVCEI--CGKGFTQKQALNTHKRGHTG  258 (306)
Q Consensus       233 ~~~C~~--C~~~f~~~~~L~~H~~~h~~  258 (306)
                      ||+|++  |++.|...+.|..|+++|+|
T Consensus         2 p~~C~~~gCgk~F~~~~~L~~H~r~HTG   29 (30)
T d1ubdc3           2 PFQCTFEGCGKRFSLDFNLRTHVRIHTG   29 (30)
T ss_dssp             CEECCSTTCCCEESCHHHHHHHHHHHHC
T ss_pred             CccCCCCCCCceECcHHHcCccccccCC
Confidence            455544  55555555555555555544

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.47  E-value=5.7e-08  Score=49.94  Aligned_cols=29  Identities=55%  Similarity=1.101  Sum_probs=17.1

Q ss_pred             CCcccC--cccCcCCChhHHHHHHhhccCCC
Q psy4573         232 RPYVCE--ICGKGFTQKQALNTHKRGHTGEI  260 (306)
Q Consensus       232 ~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~  260 (306)
                      +||.|+  .|++.|+..+.|..|+++|++++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            356663  36666666666666666666553

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.45  E-value=7e-08  Score=49.04  Aligned_cols=28  Identities=39%  Similarity=0.953  Sum_probs=15.4

Q ss_pred             CCcccCc--CCCccCCcHHHHHHHHHccCC
Q psy4573         204 RPAVCSY--CGKGFRRGDALTEHIRIHTGQ  231 (306)
Q Consensus       204 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  231 (306)
                      +||.|++  |++.|...+.|..|+++|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            3555555  555555555555555555543

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.38  E-value=1.4e-07  Score=48.65  Aligned_cols=28  Identities=39%  Similarity=0.904  Sum_probs=15.5

Q ss_pred             CCCcccCc--ccCcCCChhHHHHHHhhccC
Q psy4573         231 QRPYVCEI--CGKGFTQKQALNTHKRGHTG  258 (306)
Q Consensus       231 ~~~~~C~~--C~~~f~~~~~L~~H~~~h~~  258 (306)
                      ++||.|++  |++.|+..+.|.+|+++|..
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            34555544  55555555555555555543

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.35  E-value=9.8e-08  Score=48.60  Aligned_cols=26  Identities=38%  Similarity=0.828  Sum_probs=12.9

Q ss_pred             ceeccc--cccccCChHHHHHHHhhccC
Q psy4573         177 KFECEV--CHRKLSTKNHLRLHMRTHTN  202 (306)
Q Consensus       177 ~~~C~~--C~~~f~~~~~l~~H~~~h~~  202 (306)
                      ||.|+.  |++.|...+.|.+|+++|++
T Consensus         2 p~~C~~~gCgk~F~~~~~L~~H~r~HTG   29 (30)
T d1ubdc3           2 PFQCTFEGCGKRFSLDFNLRTHVRIHTG   29 (30)
T ss_dssp             CEECCSTTCCCEESCHHHHHHHHHHHHC
T ss_pred             CccCCCCCCCceECcHHHcCccccccCC
Confidence            445543  55555555555555555544

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.30  E-value=1.1e-07  Score=47.90  Aligned_cols=26  Identities=42%  Similarity=0.949  Sum_probs=14.2

Q ss_pred             CCcccCc--ccCcCCChhHHHHHHhhcc
Q psy4573         232 RPYVCEI--CGKGFTQKQALNTHKRGHT  257 (306)
Q Consensus       232 ~~~~C~~--C~~~f~~~~~L~~H~~~h~  257 (306)
                      +||+|++  |++.|...+.|.+|+++|+
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~Ht   28 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHT   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHH
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccC
Confidence            3555544  5555555555555555554

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.27  E-value=2.8e-07  Score=47.29  Aligned_cols=27  Identities=37%  Similarity=0.787  Sum_probs=13.1

Q ss_pred             ceecc--ccccccCChHHHHHHHhhccCC
Q psy4573         177 KFECE--VCHRKLSTKNHLRLHMRTHTNE  203 (306)
Q Consensus       177 ~~~C~--~C~~~f~~~~~l~~H~~~h~~~  203 (306)
                      ||.|+  .|++.|...+.|.+|+++|+++
T Consensus         2 pf~C~~~~C~k~F~~~~~L~~H~r~Htge   30 (31)
T d1sp2a_           2 PFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             cCCCcCCCCCcCcCChhHhhhhcCccccc
Confidence            44443  3555555555555555555443

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.23  E-value=2e-07  Score=46.35  Aligned_cols=25  Identities=48%  Similarity=0.966  Sum_probs=15.3

Q ss_pred             CCcccCc--ccCcCCChhHHHHHHhhc
Q psy4573         232 RPYVCEI--CGKGFTQKQALNTHKRGH  256 (306)
Q Consensus       232 ~~~~C~~--C~~~f~~~~~L~~H~~~h  256 (306)
                      +||+|+.  ||+.|+..+.|.+|+++|
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~H   27 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTH   27 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHH
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhc
Confidence            4566655  666666666666666655

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.21  E-value=3.1e-07  Score=47.34  Aligned_cols=29  Identities=28%  Similarity=0.698  Sum_probs=26.8

Q ss_pred             CCcccCCc--chHhhcChHHHHHHhhhcCCC
Q psy4573         259 EIPYHCEF--CSERFSTKALVRHHVRSHHSS  287 (306)
Q Consensus       259 ~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~  287 (306)
                      ++||.|.+  |+++|+..+.|.+|+++|...
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            58999988  999999999999999999864

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.11  E-value=1.1e-06  Score=40.41  Aligned_cols=24  Identities=54%  Similarity=0.977  Sum_probs=13.5

Q ss_pred             cccCcccCcCCChhHHHHHHhhcc
Q psy4573         234 YVCEICGKGFTQKQALNTHKRGHT  257 (306)
Q Consensus       234 ~~C~~C~~~f~~~~~L~~H~~~h~  257 (306)
                      .+|+.|++.|+.+..|..|++.|+
T Consensus         2 hkc~~c~kcfsrkdklk~hmr~ht   25 (26)
T d2dmda2           2 HKCEVCGKCFSRKDKLKTHMRCHT   25 (26)
T ss_dssp             CCBTTTTBCCCCHHHHHHHGGGCC
T ss_pred             CccchhhhHhcchhHHHHHhhccC
Confidence            455555555555555555555554

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.09  E-value=5.6e-07  Score=45.20  Aligned_cols=25  Identities=52%  Similarity=0.999  Sum_probs=12.1

Q ss_pred             CcccCc--CCCccCCcHHHHHHHHHcc
Q psy4573         205 PAVCSY--CGKGFRRGDALTEHIRIHT  229 (306)
Q Consensus       205 ~~~C~~--C~~~f~~~~~l~~H~~~h~  229 (306)
                      ||.|.+  |++.|...+.|..|+++|+
T Consensus         2 p~~C~~~gC~k~F~~~~~L~~H~r~Ht   28 (29)
T d1a1ia1           2 PYACPVESCDRRFSRSADLTRHIRIHT   28 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHTHHHH
T ss_pred             CeECCCCCCCcEECchhHhhhhcCccC
Confidence            444443  5555555555555544443

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.08  E-value=9e-07  Score=43.84  Aligned_cols=31  Identities=52%  Similarity=0.934  Sum_probs=24.4

Q ss_pred             CCcccCcccCcCCChhHHHHHHhhccCCCcc
Q psy4573         232 RPYVCEICGKGFTQKQALNTHKRGHTGEIPY  262 (306)
Q Consensus       232 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~  262 (306)
                      +...|..||+.|.+...|++|...|.+++||
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            3456888888888888888888888888876

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.00  E-value=1.9e-06  Score=41.08  Aligned_cols=25  Identities=32%  Similarity=0.962  Sum_probs=13.7

Q ss_pred             CCcccCcccCcCCChhHHHHHHhhc
Q psy4573         232 RPYVCEICGKGFTQKQALNTHKRGH  256 (306)
Q Consensus       232 ~~~~C~~C~~~f~~~~~L~~H~~~h  256 (306)
                      +||.|.+||+.|..+....+|.+.|
T Consensus         2 kPf~C~~CgrkFArsderkRH~kiH   26 (28)
T d1a1ia3           2 KPFACDICGRKFARSDERKRHTKIH   26 (28)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHGGG
T ss_pred             CCcccchhhhhhhcchhhhhhhhhc
Confidence            4555555555555555555555544

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.97  E-value=1.7e-06  Score=39.75  Aligned_cols=26  Identities=38%  Similarity=0.828  Sum_probs=24.0

Q ss_pred             cccCCcchHhhcChHHHHHHhhhcCC
Q psy4573         261 PYHCEFCSERFSTKALVRHHVRSHHS  286 (306)
Q Consensus       261 ~~~C~~C~~~f~~~~~l~~H~~~~h~  286 (306)
                      |.+|+.|++.|+.+..|..|++.|++
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            46899999999999999999999875

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.96  E-value=1.6e-06  Score=42.99  Aligned_cols=26  Identities=42%  Similarity=0.905  Sum_probs=16.4

Q ss_pred             CCcccCc--CCCccCCcHHHHHHHHHcc
Q psy4573         204 RPAVCSY--CGKGFRRGDALTEHIRIHT  229 (306)
Q Consensus       204 ~~~~C~~--C~~~f~~~~~l~~H~~~h~  229 (306)
                      +||.|++  |++.|...+.|.+|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            3566655  6666666666666666653

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.96  E-value=2e-06  Score=42.53  Aligned_cols=31  Identities=29%  Similarity=0.643  Sum_probs=28.3

Q ss_pred             ceeccccccccCChHHHHHHHhhccCCCCcc
Q psy4573         177 KFECEVCHRKLSTKNHLRLHMRTHTNERPAV  207 (306)
Q Consensus       177 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  207 (306)
                      ...|.+||+.|++...|++|...|.+++||.
T Consensus         5 ~~~ce~cgk~frdvyhlnrhklshs~ekpys   35 (35)
T d2epra1           5 QVACEICGKIFRDVYHLNRHKLSHSGEKPYS   35 (35)
T ss_dssp             SEEETTTTEEESSHHHHHHHGGGSCSCCCCC
T ss_pred             hhhHHHHHHHHHHHHHHHhhhcccCCCCCCC
Confidence            4679999999999999999999999999983

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.91  E-value=3.3e-06  Score=40.21  Aligned_cols=27  Identities=41%  Similarity=0.913  Sum_probs=21.3

Q ss_pred             CCCcccCcCCCccCCcHHHHHHHHHcc
Q psy4573         203 ERPAVCSYCGKGFRRGDALTEHIRIHT  229 (306)
Q Consensus       203 ~~~~~C~~C~~~f~~~~~l~~H~~~h~  229 (306)
                      ++||.|.+||+.|..+....+|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            467888888888888888888887774

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.87  E-value=4.5e-06  Score=40.28  Aligned_cols=28  Identities=43%  Similarity=0.953  Sum_probs=17.9

Q ss_pred             CCCcccCcCCCccCCcHHHHHHHHHccC
Q psy4573         203 ERPAVCSYCGKGFRRGDALTEHIRIHTG  230 (306)
Q Consensus       203 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~  230 (306)
                      ++||.|++|+..|.....+..|++.|.|
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg   28 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDG   28 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSC
T ss_pred             CCCcccchHHHHhhccccceEeeecccC
Confidence            3566666666666666666666666654

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.85  E-value=3.1e-06  Score=40.86  Aligned_cols=29  Identities=48%  Similarity=0.847  Sum_probs=17.8

Q ss_pred             CCcccCCcchHhhcChHHHHHHhhhcCCC
Q psy4573         259 EIPYHCEFCSERFSTKALVRHHVRSHHSS  287 (306)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  287 (306)
                      ++||.|++|+..|..++.+..|++.|-+.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            35666666666666666666666666554

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.85  E-value=5.4e-06  Score=38.90  Aligned_cols=26  Identities=46%  Similarity=0.842  Sum_probs=16.7

Q ss_pred             cccCcccCcCCChhHHHHHHhhccCC
Q psy4573         234 YVCEICGKGFTQKQALNTHKRGHTGE  259 (306)
Q Consensus       234 ~~C~~C~~~f~~~~~L~~H~~~h~~~  259 (306)
                      ..|.+||+.|...+.|.+|+..|+++
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccCC
Confidence            45666666666666666666666553

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.78  E-value=5.4e-06  Score=39.07  Aligned_cols=27  Identities=41%  Similarity=0.834  Sum_probs=13.3

Q ss_pred             CCcccCcccCcCCChhHHHHHHhhccC
Q psy4573         232 RPYVCEICGKGFTQKQALNTHKRGHTG  258 (306)
Q Consensus       232 ~~~~C~~C~~~f~~~~~L~~H~~~h~~  258 (306)
                      +||+|..|.+.-.+.+.|..|++.|+|
T Consensus         2 rpfkcqlcsy~srnssqltvhlr~htg   28 (29)
T d2dmda3           2 RPFKCQICPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             CcceeeecccccCCchheEEeeecccC
Confidence            445555555544455555555544443

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.73  E-value=1.1e-05  Score=38.05  Aligned_cols=27  Identities=26%  Similarity=0.632  Sum_probs=13.6

Q ss_pred             CcccCCcchHhhcChHHHHHHhhhcCC
Q psy4573         260 IPYHCEFCSERFSTKALVRHHVRSHHS  286 (306)
Q Consensus       260 ~~~~C~~C~~~f~~~~~l~~H~~~~h~  286 (306)
                      +||+|..|.+...+.++|..|++.|++
T Consensus         2 rpfkcqlcsy~srnssqltvhlr~htg   28 (29)
T d2dmda3           2 RPFKCQICPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             CcceeeecccccCCchheEEeeecccC
Confidence            345555555555555555555555544

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.71  E-value=7e-06  Score=39.68  Aligned_cols=26  Identities=35%  Similarity=0.988  Sum_probs=14.6

Q ss_pred             cccCCc--chHhhcChHHHHHHhhhcCC
Q psy4573         261 PYHCEF--CSERFSTKALVRHHVRSHHS  286 (306)
Q Consensus       261 ~~~C~~--C~~~f~~~~~l~~H~~~~h~  286 (306)
                      ||.|..  |+++++.+++|+.|++.+|+
T Consensus         2 PY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           2 PYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            455544  55555666666666555553

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.58  E-value=3.1e-05  Score=36.71  Aligned_cols=26  Identities=38%  Similarity=0.713  Sum_probs=13.9

Q ss_pred             cccCcccCcCCChhHHHHHHhhccCC
Q psy4573         234 YVCEICGKGFTQKQALNTHKRGHTGE  259 (306)
Q Consensus       234 ~~C~~C~~~f~~~~~L~~H~~~h~~~  259 (306)
                      |.|+.||......+.|..|++.|+++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCC
Confidence            45555555555555555555555543

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.50  E-value=2.9e-05  Score=37.48  Aligned_cols=27  Identities=37%  Similarity=0.906  Sum_probs=17.0

Q ss_pred             CCcccCc--ccCcCCChhHHHHHHhhccC
Q psy4573         232 RPYVCEI--CGKGFTQKQALNTHKRGHTG  258 (306)
Q Consensus       232 ~~~~C~~--C~~~f~~~~~L~~H~~~h~~  258 (306)
                      +||.|.+  |++.+.+.+.|+.|++.++|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            3566654  66666666666666665553

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.48  E-value=5.8e-05  Score=35.73  Aligned_cols=26  Identities=35%  Similarity=0.676  Sum_probs=14.4

Q ss_pred             cccCcCCCccCCcHHHHHHHHHccCC
Q psy4573         206 AVCSYCGKGFRRGDALTEHIRIHTGQ  231 (306)
Q Consensus       206 ~~C~~C~~~f~~~~~l~~H~~~h~~~  231 (306)
                      |.|+.|+......+.|+.|++.|+++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCC
Confidence            45555555555555555555555544

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.45  E-value=4.5e-05  Score=35.67  Aligned_cols=26  Identities=27%  Similarity=0.543  Sum_probs=16.8

Q ss_pred             eeccccccccCChHHHHHHHhhccCC
Q psy4573         178 FECEVCHRKLSTKNHLRLHMRTHTNE  203 (306)
Q Consensus       178 ~~C~~C~~~f~~~~~l~~H~~~h~~~  203 (306)
                      ..|..||+.|...+.|++|+..|+++
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccCC
Confidence            35666666666666677766666653

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.42  E-value=2.8e-05  Score=37.88  Aligned_cols=28  Identities=32%  Similarity=0.806  Sum_probs=23.4

Q ss_pred             cccCCcchHhhcChHHHHHHhhhcCCCC
Q psy4573         261 PYHCEFCSERFSTKALVRHHVRSHHSSA  288 (306)
Q Consensus       261 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~  288 (306)
                      ||.|.+|++.|+.++.|.+|+++-|++.
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g~   28 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSGN   28 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcCc
Confidence            6889999999999999999988877654

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.39  E-value=5.3e-05  Score=35.33  Aligned_cols=24  Identities=38%  Similarity=0.755  Sum_probs=10.1

Q ss_pred             CcccCcccCcCCChhHHHHHHhhc
Q psy4573         233 PYVCEICGKGFTQKQALNTHKRGH  256 (306)
Q Consensus       233 ~~~C~~C~~~f~~~~~L~~H~~~h  256 (306)
                      ||+|..|++...+.+.|..|++.|
T Consensus         3 p~kck~cdyaaadsssl~kh~rih   26 (28)
T d2dmda1           3 PYKCKTCDYAAADSSSLNKHLRIH   26 (28)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHHS
T ss_pred             CcccccccchhcchhhHhhhhhcc
Confidence            344444444444444444444433

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.37  E-value=6.6e-05  Score=33.98  Aligned_cols=23  Identities=35%  Similarity=0.826  Sum_probs=13.9

Q ss_pred             eeccccccccCChHHHHHHHhhc
Q psy4573         178 FECEVCHRKLSTKNHLRLHMRTH  200 (306)
Q Consensus       178 ~~C~~C~~~f~~~~~l~~H~~~h  200 (306)
                      |+|.+|.+.|..++.|.+|++.|
T Consensus         1 ykcglcersfveksalsrhqrvh   23 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGT
T ss_pred             CcccchHHHHHHHHHHHHHHHhh
Confidence            45666666666666666666555

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.32  E-value=9.3e-05  Score=34.47  Aligned_cols=24  Identities=25%  Similarity=0.693  Sum_probs=11.8

Q ss_pred             ceeccccccccCChHHHHHHHhhc
Q psy4573         177 KFECEVCHRKLSTKNHLRLHMRTH  200 (306)
Q Consensus       177 ~~~C~~C~~~f~~~~~l~~H~~~h  200 (306)
                      ||+|..|.+...+.++|+.|+++|
T Consensus         3 p~kck~cdyaaadsssl~kh~rih   26 (28)
T d2dmda1           3 PYKCKTCDYAAADSSSLNKHLRIH   26 (28)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHHS
T ss_pred             CcccccccchhcchhhHhhhhhcc
Confidence            444445554444444455444444

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.26  E-value=5.8e-05  Score=35.89  Aligned_cols=28  Identities=25%  Similarity=0.723  Sum_probs=18.4

Q ss_pred             CcccCCcchHhhcChHHHHHHhhhcCCC
Q psy4573         260 IPYHCEFCSERFSTKALVRHHVRSHHSS  287 (306)
Q Consensus       260 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~  287 (306)
                      +||.|.+|.+...+.++|..|+++.|+.
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhsk   28 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHSK   28 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSS
T ss_pred             CCccccccccccccchhhhhhhhccccc
Confidence            3566677776666667777776666653

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.25  E-value=0.00013  Score=33.55  Aligned_cols=26  Identities=46%  Similarity=0.913  Sum_probs=20.9

Q ss_pred             eccccccccCChHHHHHHHhhccCCC
Q psy4573         179 ECEVCHRKLSTKNHLRLHMRTHTNER  204 (306)
Q Consensus       179 ~C~~C~~~f~~~~~l~~H~~~h~~~~  204 (306)
                      .|+.|.+.|.++..|..|-+.|++++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            57888888888888888888888764

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.23  E-value=0.00011  Score=38.22  Aligned_cols=31  Identities=26%  Similarity=0.475  Sum_probs=25.0

Q ss_pred             cCCcccccccccccCChHHHHHHhhhcCCCC
Q psy4573          40 QDGSLACNVCSKRCGSKSGLKIHMKSHTLSK   70 (306)
Q Consensus        40 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~   70 (306)
                      +.+.|.|..|++.|.+...|--|++.|..+.
T Consensus         2 p~r~~~C~~C~k~F~s~qALGGH~~~Hr~~r   32 (37)
T d1njqa_           2 PPRSYTCSFCKREFRSAQALGGHMNVHRRDR   32 (37)
T ss_dssp             CSSSEECTTTCCEESSHHHHHHHHHTTCCSC
T ss_pred             CCCccCCCCCCCccCCcccccchHhhhcchH
Confidence            3567889999999998999999988886653

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.18  E-value=5.1e-05  Score=36.02  Aligned_cols=28  Identities=21%  Similarity=0.628  Sum_probs=19.0

Q ss_pred             CcccCCcchHhhcChHHHHHHhhhcCCC
Q psy4573         260 IPYHCEFCSERFSTKALVRHHVRSHHSS  287 (306)
Q Consensus       260 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~  287 (306)
                      +||+|.+|.....+.++|..|+++.|++
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~D   28 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHGD   28 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHSS
T ss_pred             CCcccceecccccCcchHHHHHHHHccC
Confidence            3567777776667777777777766654

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.15  E-value=0.00016  Score=34.13  Aligned_cols=28  Identities=32%  Similarity=0.622  Sum_probs=22.1

Q ss_pred             CcccccccccccCChHHHHHHhhhcCCC
Q psy4573          42 GSLACNVCSKRCGSKSGLKIHMKSHTLS   69 (306)
Q Consensus        42 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~   69 (306)
                      ..|.|..|...|.....|+.||.+|.++
T Consensus         3 qvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           3 QVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             ceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            4678888888888888888888887764

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.14  E-value=0.00022  Score=32.24  Aligned_cols=20  Identities=40%  Similarity=0.949  Sum_probs=8.1

Q ss_pred             ccCcccCcCCChhHHHHHHh
Q psy4573         235 VCEICGKGFTQKQALNTHKR  254 (306)
Q Consensus       235 ~C~~C~~~f~~~~~L~~H~~  254 (306)
                      +|..|.++|..++.|.+|++
T Consensus         2 kcglcersfveksalsrhqr   21 (26)
T d1znfa_           2 KCGLCERSFVEKSALSRHQR   21 (26)
T ss_dssp             BCSSSCCBCSSHHHHHHHGG
T ss_pred             cccchHHHHHHHHHHHHHHH
Confidence            33444444444444444433

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.12  E-value=0.00032  Score=33.28  Aligned_cols=23  Identities=26%  Similarity=0.512  Sum_probs=11.1

Q ss_pred             CcccCcCCCccCCcHHHHHHHHH
Q psy4573         205 PAVCSYCGKGFRRGDALTEHIRI  227 (306)
Q Consensus       205 ~~~C~~C~~~f~~~~~l~~H~~~  227 (306)
                      ||.|..|.+...++++|..|++.
T Consensus         2 py~cqyc~yrsadssnlkthikt   24 (30)
T d1klra_           2 TYQCQYCEFRSADSSNLKTHIKT   24 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHH
T ss_pred             Cccccccccccccchhhhhhhhc
Confidence            44444444444444444444443

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.09  E-value=0.00014  Score=34.22  Aligned_cols=24  Identities=38%  Similarity=0.822  Sum_probs=12.2

Q ss_pred             CcccCc--ccCcCCChhHHHHHHhhc
Q psy4573         233 PYVCEI--CGKGFTQKQALNTHKRGH  256 (306)
Q Consensus       233 ~~~C~~--C~~~f~~~~~L~~H~~~h  256 (306)
                      ||.|+.  |++.|+..+.|.+|.+.|
T Consensus         3 py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           3 PYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CccCCccCccccccCHHHHhhhhhcc
Confidence            455543  555555555555555443

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.06  E-value=0.00013  Score=33.52  Aligned_cols=25  Identities=28%  Similarity=0.656  Sum_probs=14.0

Q ss_pred             cCCcchHhhcChHHHHHHhhhcCCC
Q psy4573         263 HCEFCSERFSTKALVRHHVRSHHSS  287 (306)
Q Consensus       263 ~C~~C~~~f~~~~~l~~H~~~~h~~  287 (306)
                      +|+.|.++|.++..|..|-+.|+++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htge   26 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGE   26 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSC
T ss_pred             cCcchHHHHHHhHhhhhccccccCC
Confidence            3555555555555555555555543

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.97  E-value=0.0002  Score=33.87  Aligned_cols=23  Identities=35%  Similarity=0.590  Sum_probs=15.5

Q ss_pred             cccccccccccCChHHHHHHhhh
Q psy4573          43 SLACNVCSKRCGSKSGLKIHMKS   65 (306)
Q Consensus        43 ~~~C~~C~~~f~~~~~l~~H~~~   65 (306)
                      +|.|..|+..|.++.+|..||++
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            46677777777777777777664

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.80  E-value=0.0002  Score=34.80  Aligned_cols=26  Identities=38%  Similarity=0.936  Sum_probs=16.3

Q ss_pred             CCcccCc--ccCcCCChhHHHHHH-hhcc
Q psy4573         232 RPYVCEI--CGKGFTQKQALNTHK-RGHT  257 (306)
Q Consensus       232 ~~~~C~~--C~~~f~~~~~L~~H~-~~h~  257 (306)
                      +||.|..  |.+.|++.++-..|+ ++|.
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs   29 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHS   29 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTC
T ss_pred             CCccccCCChhhhhcchhhhhhhcccccc
Confidence            4666654  666666666666665 5554

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.79  E-value=0.00048  Score=32.39  Aligned_cols=25  Identities=32%  Similarity=0.631  Sum_probs=17.2

Q ss_pred             CCcccCc--CCCccCCcHHHHHHHHHc
Q psy4573         204 RPAVCSY--CGKGFRRGDALTEHIRIH  228 (306)
Q Consensus       204 ~~~~C~~--C~~~f~~~~~l~~H~~~h  228 (306)
                      .||+|+.  |++.|...+.|.+|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            4667754  777777777777777665

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.78  E-value=0.00048  Score=35.81  Aligned_cols=24  Identities=38%  Similarity=0.888  Sum_probs=10.7

Q ss_pred             cccCcCCCccCCcHHHHHHHHHcc
Q psy4573         206 AVCSYCGKGFRRGDALTEHIRIHT  229 (306)
Q Consensus       206 ~~C~~C~~~f~~~~~l~~H~~~h~  229 (306)
                      |.|.+|++.|.+...|-.|++.|.
T Consensus         6 ~~C~~C~k~F~s~qALGGH~~~Hr   29 (37)
T d1njqa_           6 YTCSFCKREFRSAQALGGHMNVHR   29 (37)
T ss_dssp             EECTTTCCEESSHHHHHHHHHTTC
T ss_pred             cCCCCCCCccCCcccccchHhhhc
Confidence            444444444444444444444443

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.68  E-value=0.00056  Score=32.28  Aligned_cols=20  Identities=35%  Similarity=0.728  Sum_probs=8.0

Q ss_pred             cccCcccCcCCChhHHHHHH
Q psy4573         234 YVCEICGKGFTQKQALNTHK  253 (306)
Q Consensus       234 ~~C~~C~~~f~~~~~L~~H~  253 (306)
                      |.|..|...|.++.+|..||
T Consensus         2 y~C~~CnF~FKTKGNLTKHm   21 (29)
T d1bboa2           2 YHCTYCNFSFKTKGNLTKHM   21 (29)
T ss_dssp             EECSSSSCEESSHHHHHHHH
T ss_pred             cccceeeeeEeeccchhHhh
Confidence            33444444444444444443

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.58  E-value=0.00079  Score=31.66  Aligned_cols=20  Identities=25%  Similarity=0.683  Sum_probs=7.4

Q ss_pred             ccCcccCcCCChhHHHHHHh
Q psy4573         235 VCEICGKGFTQKQALNTHKR  254 (306)
Q Consensus       235 ~C~~C~~~f~~~~~L~~H~~  254 (306)
                      .|..|...|..+..|+-||-
T Consensus         6 tcs~cqe~f~rrmelr~hmv   25 (30)
T d2dlqa3           6 TCSVCQETFRRRMELRLHMV   25 (30)
T ss_dssp             ECSSSCCEESSHHHHHHHHH
T ss_pred             EeHHHHHHHHHHHhheeeee
Confidence            33333333333333333333

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.55  E-value=0.00069  Score=35.34  Aligned_cols=24  Identities=38%  Similarity=0.933  Sum_probs=12.9

Q ss_pred             CCCCcccCcccCcCCChhHHHHHH
Q psy4573         230 GQRPYVCEICGKGFTQKQALNTHK  253 (306)
Q Consensus       230 ~~~~~~C~~C~~~f~~~~~L~~H~  253 (306)
                      |-+||.|.+|++.|.-+..+.+|.
T Consensus         2 GiKPYeC~~C~KrFMWRDSF~RH~   25 (44)
T d2csha2           2 GIKPYECNICAKRFMWRDSFHRHV   25 (44)
T ss_dssp             CCCCEECSSSCCEESCHHHHHHHH
T ss_pred             CCCceeccchhhhhhhHHHHHHhh
Confidence            345555555555555555555554

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.55  E-value=0.00046  Score=36.01  Aligned_cols=27  Identities=41%  Similarity=0.828  Sum_probs=24.1

Q ss_pred             cCCCcccCCcchHhhcChHHHHHHhhh
Q psy4573         257 TGEIPYHCEFCSERFSTKALVRHHVRS  283 (306)
Q Consensus       257 ~~~~~~~C~~C~~~f~~~~~l~~H~~~  283 (306)
                      +|.+||.|.+|++.|-..+++.+|...
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~~   27 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVTS   27 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhhh
Confidence            367999999999999999999999743

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.35  E-value=0.0011  Score=34.13  Aligned_cols=27  Identities=37%  Similarity=0.903  Sum_probs=17.3

Q ss_pred             CCCCccc--CcccCcCCChhHHHHHHhhc
Q psy4573         230 GQRPYVC--EICGKGFTQKQALNTHKRGH  256 (306)
Q Consensus       230 ~~~~~~C--~~C~~~f~~~~~L~~H~~~h  256 (306)
                      +++||.|  +-|+..|.+...|..|...|
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH   31 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKH   31 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhh
Confidence            3566677  44667777777776666555

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.33  E-value=0.0011  Score=31.40  Aligned_cols=24  Identities=29%  Similarity=0.656  Sum_probs=14.1

Q ss_pred             CCcccCcccCcCCChhHHHHHHhh
Q psy4573         232 RPYVCEICGKGFTQKQALNTHKRG  255 (306)
Q Consensus       232 ~~~~C~~C~~~f~~~~~L~~H~~~  255 (306)
                      +||+|..|.......++|..|++.
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk   24 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKK   24 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHH
T ss_pred             CCcccceecccccCcchHHHHHHH
Confidence            355666666666666666666543

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.30  E-value=0.0011  Score=32.05  Aligned_cols=22  Identities=36%  Similarity=0.964  Sum_probs=17.4

Q ss_pred             CcccCcccCcCCChhHHHHHHh
Q psy4573         233 PYVCEICGKGFTQKQALNTHKR  254 (306)
Q Consensus       233 ~~~C~~C~~~f~~~~~L~~H~~  254 (306)
                      ||.|.+|++.|+.+..|.+|+.
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~q   22 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQ   22 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHT
T ss_pred             CcccccccchhhHHHHHHHHHH
Confidence            5778888888888888888874

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.21  E-value=0.0019  Score=30.02  Aligned_cols=25  Identities=36%  Similarity=0.604  Sum_probs=15.4

Q ss_pred             CcccCcccCcCCChhHHHHHHhhcc
Q psy4573         233 PYVCEICGKGFTQKQALNTHKRGHT  257 (306)
Q Consensus       233 ~~~C~~C~~~f~~~~~L~~H~~~h~  257 (306)
                      |-+|++|.++.+++..|+.|.+.|.
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            3456666666666666666666553

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.17  E-value=0.0013  Score=31.01  Aligned_cols=19  Identities=47%  Similarity=0.774  Sum_probs=8.7

Q ss_pred             ccCcCCChhHHHHHHhhcc
Q psy4573         239 CGKGFTQKQALNTHKRGHT  257 (306)
Q Consensus       239 C~~~f~~~~~L~~H~~~h~  257 (306)
                      |.+.|.+...|.+|..+|.
T Consensus        10 c~kgf~tlhhltrhs~tht   28 (30)
T d1tf3a2          10 CEKGFTSLHHLTRHSLTHT   28 (30)
T ss_dssp             CCCEESSTTHHHHHHHHHH
T ss_pred             ccccchhhhhhhhhhcccc
Confidence            4444444444444444443

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.13  E-value=0.00064  Score=32.11  Aligned_cols=28  Identities=21%  Similarity=0.574  Sum_probs=24.7

Q ss_pred             CcccCCc--chHhhcChHHHHHHhhhcCCC
Q psy4573         260 IPYHCEF--CSERFSTKALVRHHVRSHHSS  287 (306)
Q Consensus       260 ~~~~C~~--C~~~f~~~~~l~~H~~~~h~~  287 (306)
                      +||.|..  |.++|.....|.+|..+|+++
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            4788976  999999999999999998764

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.98  E-value=0.0019  Score=33.19  Aligned_cols=28  Identities=25%  Similarity=0.576  Sum_probs=21.9

Q ss_pred             cCCcccc--cccccccCChHHHHHHhhhcC
Q psy4573          40 QDGSLAC--NVCSKRCGSKSGLKIHMKSHT   67 (306)
Q Consensus        40 ~~~~~~C--~~C~~~f~~~~~l~~H~~~h~   67 (306)
                      .+++|.|  +.|++.|.+...|..|...|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            3778888  678888888888888877653

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.84  E-value=0.0014  Score=35.43  Aligned_cols=26  Identities=23%  Similarity=0.523  Sum_probs=21.1

Q ss_pred             cccCCcchHhhcChHHHHHHhhhcCC
Q psy4573         261 PYHCEFCSERFSTKALVRHHVRSHHS  286 (306)
Q Consensus       261 ~~~C~~C~~~f~~~~~l~~H~~~~h~  286 (306)
                      .|.|..|++.|++...|+.|..+|-.
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQHG~   31 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQHGV   31 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHHTT
T ss_pred             eeeccccccccCCHHHHhHhHHhcCc
Confidence            47888888888888888888777654

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.65  E-value=0.0026  Score=29.35  Aligned_cols=22  Identities=23%  Similarity=0.569  Sum_probs=14.3

Q ss_pred             cccCCcchHhhcChHHHHHHhh
Q psy4573         261 PYHCEFCSERFSTKALVRHHVR  282 (306)
Q Consensus       261 ~~~C~~C~~~f~~~~~l~~H~~  282 (306)
                      ||.|+.|++.+-.+.+|..|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            4666666666666666666643

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.50  E-value=0.0037  Score=28.06  Aligned_cols=21  Identities=43%  Similarity=0.956  Sum_probs=14.0

Q ss_pred             CcccCcccCcCCChhHHHHHH
Q psy4573         233 PYVCEICGKGFTQKQALNTHK  253 (306)
Q Consensus       233 ~~~C~~C~~~f~~~~~L~~H~  253 (306)
                      ||+|.-|...|..+.+|..|+
T Consensus         2 pykcsscsqqfmqkkdlqshm   22 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHM   22 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHH
Confidence            566666666666666666665

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.42  E-value=0.0093  Score=27.66  Aligned_cols=23  Identities=39%  Similarity=0.676  Sum_probs=12.8

Q ss_pred             eeccccccccCChHHHHHHHhhc
Q psy4573         178 FECEVCHRKLSTKNHLRLHMRTH  200 (306)
Q Consensus       178 ~~C~~C~~~f~~~~~l~~H~~~h  200 (306)
                      -+|+.|++...+++.|+.|.++|
T Consensus         3 ekc~ecsyscsskaalrvh~rih   25 (28)
T d1x5wa1           3 EKCSECSYSCSSKAALRIHERIH   25 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHGGG
T ss_pred             ccCcccccccCcHHHHHHhhccc
Confidence            44555555555555555555554

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.36  E-value=0.0026  Score=30.75  Aligned_cols=21  Identities=24%  Similarity=0.554  Sum_probs=9.9

Q ss_pred             ceeccc--cccccCChHHHHHHH
Q psy4573         177 KFECEV--CHRKLSTKNHLRLHM  197 (306)
Q Consensus       177 ~~~C~~--C~~~f~~~~~l~~H~  197 (306)
                      ||.|..  |++.|.+.++-..|+
T Consensus         2 PY~C~~~gC~KafsNsSDraKHq   24 (31)
T d2glia4           2 PYMCEHEGCSKAFSNASDRAKHQ   24 (31)
T ss_dssp             CEECCSTTCCCEESSSSTTHHHH
T ss_pred             CccccCCChhhhhcchhhhhhhc
Confidence            344443  445555554444444

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.21  E-value=0.0074  Score=27.89  Aligned_cols=24  Identities=25%  Similarity=0.605  Sum_probs=18.6

Q ss_pred             cccccccccccCChHHHHHHhhhc
Q psy4573          43 SLACNVCSKRCGSKSGLKIHMKSH   66 (306)
Q Consensus        43 ~~~C~~C~~~f~~~~~l~~H~~~h   66 (306)
                      .|.||.|+.....+++|..|++.-
T Consensus         2 k~qcphc~tiiarksdlrvhlrnl   25 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRKQ   25 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHT
T ss_pred             CccCCcchhheeehhhhhHHhhhc
Confidence            477888888888888888887753

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.10  E-value=0.0064  Score=32.81  Aligned_cols=25  Identities=36%  Similarity=0.694  Sum_probs=20.7

Q ss_pred             CcccCcccCcCCChhHHHHHHhhcc
Q psy4573         233 PYVCEICGKGFTQKQALNTHKRGHT  257 (306)
Q Consensus       233 ~~~C~~C~~~f~~~~~L~~H~~~h~  257 (306)
                      .|.|..||+.|.+...|+.|...|-
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             eeeccccccccCCHHHHhHhHHhcC
Confidence            4778889999999999998887764

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.01  E-value=0.0052  Score=27.58  Aligned_cols=24  Identities=33%  Similarity=0.732  Sum_probs=21.9

Q ss_pred             cccCCcchHhhcChHHHHHHhhhc
Q psy4573         261 PYHCEFCSERFSTKALVRHHVRSH  284 (306)
Q Consensus       261 ~~~C~~C~~~f~~~~~l~~H~~~~  284 (306)
                      ||+|.-|...|-++..|..|+..-
T Consensus         2 pykcsscsqqfmqkkdlqshmikl   25 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMIKL   25 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHHT
T ss_pred             CCcccHHHHHHHHHHHHHHHHHhc
Confidence            799999999999999999998754

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=94.95  E-value=0.0083  Score=27.00  Aligned_cols=23  Identities=26%  Similarity=0.496  Sum_probs=18.9

Q ss_pred             ccccccccccCChHHHHHHhhhc
Q psy4573          44 LACNVCSKRCGSKSGLKIHMKSH   66 (306)
Q Consensus        44 ~~C~~C~~~f~~~~~l~~H~~~h   66 (306)
                      |.|+.|-+.|.++.++..|.++.
T Consensus         2 ypcp~cfkeftrkdnm~ahvkii   24 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKII   24 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEEe
Confidence            67888888888888888887753

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=94.95  E-value=0.0051  Score=27.71  Aligned_cols=24  Identities=38%  Similarity=0.804  Sum_probs=15.4

Q ss_pred             ccCCcchHhhcChHHHHHHhhhcC
Q psy4573         262 YHCEFCSERFSTKALVRHHVRSHH  285 (306)
Q Consensus       262 ~~C~~C~~~f~~~~~l~~H~~~~h  285 (306)
                      |.|+.|=+.|+.++++..|++.-|
T Consensus         2 ypcp~cfkeftrkdnm~ahvkiih   25 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKIIH   25 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHT
T ss_pred             cCCchhhHHhccccCceEEEEEec
Confidence            566666666666666666665533

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.93  E-value=0.0097  Score=27.38  Aligned_cols=23  Identities=35%  Similarity=0.790  Sum_probs=19.2

Q ss_pred             CcccCcccCcCCChhHHHHHHhh
Q psy4573         233 PYVCEICGKGFTQKQALNTHKRG  255 (306)
Q Consensus       233 ~~~C~~C~~~f~~~~~L~~H~~~  255 (306)
                      ||+|..||+.+-.+.+|.+|...
T Consensus         1 pf~c~kcgkcyfrkenllehear   23 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEAR   23 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHHH
Confidence            68899999998889999888653

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.79  E-value=0.0065  Score=28.09  Aligned_cols=23  Identities=26%  Similarity=0.677  Sum_probs=11.8

Q ss_pred             ccCCcchHhhcChHHHHHHhhhc
Q psy4573         262 YHCEFCSERFSTKALVRHHVRSH  284 (306)
Q Consensus       262 ~~C~~C~~~f~~~~~l~~H~~~~  284 (306)
                      |+|+.|+-....++.|..|++.-
T Consensus         3 ~qcphc~tiiarksdlrvhlrnl   25 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLRKQ   25 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHHHT
T ss_pred             ccCCcchhheeehhhhhHHhhhc
Confidence            44555555555555555555443

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.38  E-value=0.0087  Score=29.55  Aligned_cols=26  Identities=15%  Similarity=0.523  Sum_probs=19.5

Q ss_pred             cccCCcchHhhcChHHHHHHhhhcCC
Q psy4573         261 PYHCEFCSERFSTKALVRHHVRSHHS  286 (306)
Q Consensus       261 ~~~C~~C~~~f~~~~~l~~H~~~~h~  286 (306)
                      .|.|..|+++|+....+.+|.....+
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            47788888888888888888766554

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.82  E-value=0.019  Score=26.94  Aligned_cols=22  Identities=18%  Similarity=0.581  Sum_probs=11.5

Q ss_pred             eecccchhccCChHHHhhhhhh
Q psy4573          72 YACSICLAEFHTLTEKDRHTLS   93 (306)
Q Consensus        72 ~~C~~C~~~~~~~~~l~~H~~~   93 (306)
                      |.|..|++...+...+..|+..
T Consensus         3 ftc~hcgkqlks~~gmkyhvma   24 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYHVMA   24 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHHH
T ss_pred             eechhHHHHHhhccCceEEEee
Confidence            4555555555555555555444

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=93.67  E-value=0.019  Score=27.96  Aligned_cols=20  Identities=30%  Similarity=0.853  Sum_probs=11.5

Q ss_pred             cccCcccCcCCChhHHHHHH
Q psy4573         234 YVCEICGKGFTQKQALNTHK  253 (306)
Q Consensus       234 ~~C~~C~~~f~~~~~L~~H~  253 (306)
                      |.|+-||-.|++.+.|..|+
T Consensus         9 f~c~pcgirfss~stleahq   28 (36)
T d1y0jb1           9 FMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             CBCTTTCCBCSCHHHHHHHT
T ss_pred             eeccccceeecChhHHHhhh
Confidence            55555555555555555554

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=93.42  E-value=0.026  Score=27.52  Aligned_cols=24  Identities=25%  Similarity=0.391  Sum_probs=18.1

Q ss_pred             CCcccccccccccCChHHHHHHhh
Q psy4573          41 DGSLACNVCSKRCGSKSGLKIHMK   64 (306)
Q Consensus        41 ~~~~~C~~C~~~f~~~~~l~~H~~   64 (306)
                      ...|.|+.||-.|++.+.|+.|+.
T Consensus         6 parf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           6 PARFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCCCBCTTTCCBCSCHHHHHHHTT
T ss_pred             ccceeccccceeecChhHHHhhhh
Confidence            345778888888888888888764

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=92.79  E-value=0.04  Score=26.27  Aligned_cols=20  Identities=35%  Similarity=0.778  Sum_probs=9.5

Q ss_pred             CCCccCCcHHHHHHHHHccC
Q psy4573         211 CGKGFRRGDALTEHIRIHTG  230 (306)
Q Consensus       211 C~~~f~~~~~l~~H~~~h~~  230 (306)
                      |+-.|+....|..|+-.|+|
T Consensus        11 C~A~ynk~wkL~AHLckHTG   30 (31)
T d1tf3a1          11 CGAAYNKNWKLQAHLSKHTG   30 (31)
T ss_dssp             GCCEESSHHHHHHHHHHHHC
T ss_pred             cchhhccchhhhHHhhhhcC
Confidence            44444444444444444443

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.02  E-value=0.092  Score=24.51  Aligned_cols=24  Identities=21%  Similarity=0.632  Sum_probs=15.0

Q ss_pred             eeccccccccCChHHHHHHHhhcc
Q psy4573         178 FECEVCHRKLSTKNHLRLHMRTHT  201 (306)
Q Consensus       178 ~~C~~C~~~f~~~~~l~~H~~~h~  201 (306)
                      |.|..||+...+...++-|+...+
T Consensus         3 ftc~hcgkqlks~~gmkyhvmadh   26 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYHVMANH   26 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHHHHT
T ss_pred             eechhHHHHHhhccCceEEEeecc
Confidence            556666666666666666665533

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.70  E-value=0.058  Score=24.98  Aligned_cols=18  Identities=33%  Similarity=0.626  Sum_probs=10.4

Q ss_pred             ccCcCCChhHHHHHHhhc
Q psy4573         239 CGKGFTQKQALNTHKRGH  256 (306)
Q Consensus       239 C~~~f~~~~~L~~H~~~h  256 (306)
                      |++.|.+.+.++.|+.+|
T Consensus         9 C~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           9 CTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             CCCEESSHHHHHHHHGGG
T ss_pred             HHHHhhchHHHHHHhhcc
Confidence            555555555555555554

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.26  E-value=0.095  Score=25.72  Aligned_cols=26  Identities=15%  Similarity=0.396  Sum_probs=17.8

Q ss_pred             cccccccccccCChHHHHHHhhhcCC
Q psy4573          43 SLACNVCSKRCGSKSGLKIHMKSHTL   68 (306)
Q Consensus        43 ~~~C~~C~~~f~~~~~l~~H~~~h~~   68 (306)
                      .|.|..|+++|.....+.+|.....+
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            46777777777777777777665444

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.08  E-value=0.04  Score=32.25  Aligned_cols=39  Identities=21%  Similarity=0.484  Sum_probs=25.1

Q ss_pred             cCCcccccccccccCChHHHHHHhhhcCCCCceecccchhcc
Q psy4573          40 QDGSLACNVCSKRCGSKSGLKIHMKSHTLSKRYACSICLAEF   81 (306)
Q Consensus        40 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~~   81 (306)
                      ....|.||.|++.|.....+   ...-.....|.|.+|+-..
T Consensus        11 ~~~~y~Cp~C~~~ys~Lda~---~L~d~~~~~F~C~~C~~el   49 (62)
T d1vd4a_          11 NRASFKCPVCSSTFTDLEAN---QLFDPMTGTFRCTFCHTEV   49 (62)
T ss_dssp             SSSEEECSSSCCEEEHHHHH---HHEETTTTEEBCSSSCCBC
T ss_pred             cCCceECCCCCCCcchhhHH---HhcCcCCCeEEecCCCCEE
Confidence            45678888888888654433   2333444578888887543

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.95  E-value=0.06  Score=24.95  Aligned_cols=23  Identities=26%  Similarity=0.746  Sum_probs=19.7

Q ss_pred             cCCc--chHhhcChHHHHHHhhhcC
Q psy4573         263 HCEF--CSERFSTKALVRHHVRSHH  285 (306)
Q Consensus       263 ~C~~--C~~~f~~~~~l~~H~~~~h  285 (306)
                      .|+.  |++.|.+.+.++.|+.+|-
T Consensus         3 ~CphkgC~K~Frd~saMRKHlhtHG   27 (28)
T d1ubdc1           3 ACPHKGCTKMFRDNSAMRKHLHTHG   27 (28)
T ss_dssp             ECCSTTCCCEESSHHHHHHHHGGGS
T ss_pred             cCCcccHHHHhhchHHHHHHhhccC
Confidence            4554  9999999999999998875

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=90.61  E-value=0.093  Score=25.85  Aligned_cols=27  Identities=26%  Similarity=0.445  Sum_probs=21.6

Q ss_pred             hcCCcccccccccccCChHHHHHHhhh
Q psy4573          39 EQDGSLACNVCSKRCGSKSGLKIHMKS   65 (306)
Q Consensus        39 ~~~~~~~C~~C~~~f~~~~~l~~H~~~   65 (306)
                      +++..|+|..|.++|...+++-+|..+
T Consensus         4 Eg~~~yRC~~C~r~YTHISNFCRHyvt   30 (37)
T d2drpa1           4 EGEHTYRCKVCSRVYTHISNFCRHYVT   30 (37)
T ss_dssp             EETTEEECTTTCCEESSHHHHHHHHHH
T ss_pred             ccCcEEEeehhhHHHHHHHHHHHHHHh
Confidence            356678888998888888888888654

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=89.94  E-value=0.057  Score=25.74  Aligned_cols=25  Identities=24%  Similarity=0.708  Sum_probs=13.1

Q ss_pred             ccCCc--chHhhcChHHHHHHhhhcCC
Q psy4573         262 YHCEF--CSERFSTKALVRHHVRSHHS  286 (306)
Q Consensus       262 ~~C~~--C~~~f~~~~~l~~H~~~~h~  286 (306)
                      |.|..  |+..|.....|..|+-+|+|
T Consensus         4 ~iCsf~dC~A~ynk~wkL~AHLckHTG   30 (31)
T d1tf3a1           4 YICSFADCGAAYNKNWKLQAHLSKHTG   30 (31)
T ss_dssp             EECSSGGGCCEESSHHHHHHHHHHHHC
T ss_pred             eEeeCCCcchhhccchhhhHHhhhhcC
Confidence            44433  55555555555555555544

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=89.74  E-value=0.066  Score=26.41  Aligned_cols=27  Identities=26%  Similarity=0.566  Sum_probs=16.1

Q ss_pred             CCcccCCcchHhhcChHHHHHHhhhcC
Q psy4573         259 EIPYHCEFCSERFSTKALVRHHVRSHH  285 (306)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~l~~H~~~~h  285 (306)
                      +..|+|..|.++++.-+++.+|..+-|
T Consensus         6 ~~~yRC~~C~r~YTHISNFCRHyvtSH   32 (37)
T d2drpa1           6 EHTYRCKVCSRVYTHISNFCRHYVTSH   32 (37)
T ss_dssp             TTEEECTTTCCEESSHHHHHHHHHHHS
T ss_pred             CcEEEeehhhHHHHHHHHHHHHHHhhc
Confidence            344666666666666666666655544

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.54  E-value=0.059  Score=32.09  Aligned_cols=26  Identities=27%  Similarity=0.507  Sum_probs=22.0

Q ss_pred             cCCcccccccccccCChHHHHHHhhh
Q psy4573          40 QDGSLACNVCSKRCGSKSGLKIHMKS   65 (306)
Q Consensus        40 ~~~~~~C~~C~~~f~~~~~l~~H~~~   65 (306)
                      +.+.|-|..|++.|.+...|..|.++
T Consensus        12 G~gqfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          12 GGGLHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             GGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CCCEEecccccCccCCHHHHHHHHcc
Confidence            45668999999999999999999764

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.39  E-value=0.092  Score=26.14  Aligned_cols=20  Identities=40%  Similarity=0.580  Sum_probs=16.0

Q ss_pred             ccccCChHHHHHHHhhccCC
Q psy4573         184 HRKLSTKNHLRLHMRTHTNE  203 (306)
Q Consensus       184 ~~~f~~~~~l~~H~~~h~~~  203 (306)
                      ++.|.....|..|++.|+++
T Consensus        14 ~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          14 LRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             TCCCSSHHHHHHHTHHHHCC
T ss_pred             CCcchhHHHHHHHHhhcCCC
Confidence            45688888889999888875

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=89.29  E-value=0.23  Score=26.43  Aligned_cols=27  Identities=19%  Similarity=0.410  Sum_probs=21.3

Q ss_pred             ccCcceeccccccccCChHHHHHHHhh
Q psy4573         173 HLGIKFECEVCHRKLSTKNHLRLHMRT  199 (306)
Q Consensus       173 ~~~~~~~C~~C~~~f~~~~~l~~H~~~  199 (306)
                      ..++|-.|++|+.......+|.+|+..
T Consensus        20 ~s~qpatcpic~avirqsrnlrrhlel   46 (54)
T d1yuja_          20 QSEQPATCPICYAVIRQSRNLRRHLEL   46 (54)
T ss_dssp             TTSCCEECTTTCCEESSHHHHHHHHHH
T ss_pred             cccCCCCCchHHHHHHHHHHHHHHHHH
Confidence            345578888888888888888888876

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.93  E-value=0.13  Score=25.53  Aligned_cols=19  Identities=42%  Similarity=0.630  Sum_probs=10.9

Q ss_pred             CcCCChhHHHHHHhhccCC
Q psy4573         241 KGFTQKQALNTHKRGHTGE  259 (306)
Q Consensus       241 ~~f~~~~~L~~H~~~h~~~  259 (306)
                      +.|.....|..|++.|+++
T Consensus        15 ~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          15 RPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CCCSSHHHHHHHTHHHHCC
T ss_pred             CcchhHHHHHHHHhhcCCC
Confidence            4455666666666666553

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=88.34  E-value=0.15  Score=27.23  Aligned_cols=23  Identities=30%  Similarity=0.564  Sum_probs=12.3

Q ss_pred             CCcccCcccCcCCChhHHHHHHh
Q psy4573         232 RPYVCEICGKGFTQKQALNTHKR  254 (306)
Q Consensus       232 ~~~~C~~C~~~f~~~~~L~~H~~  254 (306)
                      .|-.|++|+.......+|++|+.
T Consensus        23 qpatcpic~avirqsrnlrrhle   45 (54)
T d1yuja_          23 QPATCPICYAVIRQSRNLRRHLE   45 (54)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHH
T ss_pred             CCCCCchHHHHHHHHHHHHHHHH
Confidence            44555555555555555555553

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.08  E-value=0.067  Score=31.84  Aligned_cols=24  Identities=29%  Similarity=0.463  Sum_probs=18.1

Q ss_pred             CCcccCcccCcCCChhHHHHHHhh
Q psy4573         232 RPYVCEICGKGFTQKQALNTHKRG  255 (306)
Q Consensus       232 ~~~~C~~C~~~f~~~~~L~~H~~~  255 (306)
                      ..|.|..|++.|.+...|..|+++
T Consensus        14 gqfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          14 GLHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             GCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CEEecccccCccCCHHHHHHHHcc
Confidence            347788888888888888887753

>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=87.73  E-value=0.1  Score=26.96  Aligned_cols=10  Identities=50%  Similarity=1.298  Sum_probs=5.2

Q ss_pred             CcccCcccCc
Q psy4573         233 PYVCEICGKG  242 (306)
Q Consensus       233 ~~~C~~C~~~  242 (306)
                      .|.|++||..
T Consensus         5 ~~~C~vCG~i   14 (37)
T d1nnqa2           5 VYICPICGYT   14 (37)
T ss_dssp             EEECTTTCCE
T ss_pred             EEECCCCCCE
Confidence            3555555543

>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Nigerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=87.66  E-value=0.11  Score=26.55  Aligned_cols=11  Identities=36%  Similarity=0.757  Sum_probs=5.6

Q ss_pred             CCcccCcccCc
Q psy4573         232 RPYVCEICGKG  242 (306)
Q Consensus       232 ~~~~C~~C~~~  242 (306)
                      +.|.|++||..
T Consensus         4 ~~~vC~vCGyi   14 (36)
T d1yuza2           4 KFHLCPICGYI   14 (36)
T ss_dssp             CEEECSSSCCE
T ss_pred             CEEECCCCCCE
Confidence            34555555543

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.11  E-value=0.18  Score=23.37  Aligned_cols=19  Identities=42%  Similarity=0.686  Sum_probs=14.8

Q ss_pred             CcccCcCCChhHHHHHHhh
Q psy4573         237 EICGKGFTQKQALNTHKRG  255 (306)
Q Consensus       237 ~~C~~~f~~~~~L~~H~~~  255 (306)
                      +-||+.|+++.-|+.|.+.
T Consensus         6 ~gc~kifsnrqylnhh~ky   24 (30)
T d2dlka1           6 PGCGRIFSNRQYLNHHKKY   24 (30)
T ss_dssp             TTTCCEESSHHHHHHHHHH
T ss_pred             CCchhhhccHHHHHhHHHH
Confidence            4588888888888888763

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=86.16  E-value=0.2  Score=22.77  Aligned_cols=18  Identities=39%  Similarity=0.870  Sum_probs=10.0

Q ss_pred             ccCcCCChhHHHHHHhhc
Q psy4573         239 CGKGFTQKQALNTHKRGH  256 (306)
Q Consensus       239 C~~~f~~~~~L~~H~~~h  256 (306)
                      |++.|.....|..|+-+|
T Consensus         9 c~kafkkhnqlkvhqf~h   26 (28)
T d2j7ja1           9 CGKAFKKHNQLKVHQFSH   26 (28)
T ss_dssp             CCCEESSHHHHHHHHHHH
T ss_pred             chHHHhhccceEEEeecc
Confidence            555555555555555444

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.48  E-value=0.14  Score=29.88  Aligned_cols=12  Identities=33%  Similarity=1.077  Sum_probs=5.9

Q ss_pred             cccCcccCcCCC
Q psy4573         234 YVCEICGKGFTQ  245 (306)
Q Consensus       234 ~~C~~C~~~f~~  245 (306)
                      |+|+.|++.|+.
T Consensus        15 y~Cp~C~~~ys~   26 (62)
T d1vd4a_          15 FKCPVCSSTFTD   26 (62)
T ss_dssp             EECSSSCCEEEH
T ss_pred             eECCCCCCCcch
Confidence            555555554443

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.50  E-value=0.7  Score=26.48  Aligned_cols=25  Identities=28%  Similarity=0.735  Sum_probs=18.6

Q ss_pred             ceeccccccccCChHHHHHHHhhcc
Q psy4573         177 KFECEVCHRKLSTKNHLRLHMRTHT  201 (306)
Q Consensus       177 ~~~C~~C~~~f~~~~~l~~H~~~h~  201 (306)
                      .|.|..|.-.|.+...|..|+..|.
T Consensus        18 ~yQC~HCd~K~~s~~el~~hl~~hn   42 (75)
T d1x6fa1          18 TYQCKHCDSKLQSTAELTSHLNIHN   42 (75)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             eeeechhHHHHhhHHHHHHHHHhcc
Confidence            6777777777777777777777664

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.36  E-value=0.41  Score=27.48  Aligned_cols=24  Identities=25%  Similarity=0.574  Sum_probs=13.0

Q ss_pred             CcccCcccCcCCChhHHHHHHhhc
Q psy4573         233 PYVCEICGKGFTQKQALNTHKRGH  256 (306)
Q Consensus       233 ~~~C~~C~~~f~~~~~L~~H~~~h  256 (306)
                      .|+|..|...|.+...|..|+..|
T Consensus        18 ~yQC~HCd~K~~s~~el~~hl~~h   41 (75)
T d1x6fa1          18 TYQCKHCDSKLQSTAELTSHLNIH   41 (75)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHH
T ss_pred             eeeechhHHHHhhHHHHHHHHHhc
Confidence            355555555555555555555544

>d2ctda1 g.37.1.1 (A:8-60) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.22  E-value=1.4  Score=23.77  Aligned_cols=40  Identities=25%  Similarity=0.392  Sum_probs=31.7

Q ss_pred             cCcchhhhhhhhhcCCccccccccccc-CChHHHHHHhhhc
Q psy4573          27 KTLPRAKKCREVEQDGSLACNVCSKRC-GSKSGLKIHMKSH   66 (306)
Q Consensus        27 ~~~~~~~~~~~~~~~~~~~C~~C~~~f-~~~~~l~~H~~~h   66 (306)
                      ..+....|++++.+.+...||-|...- ++...|+.||...
T Consensus        11 ~gs~EeqWq~~I~~kG~v~CPtC~~V~RKTv~GLKKHMe~C   51 (53)
T d2ctda1          11 AGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC   51 (53)
T ss_dssp             TTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHCCcccCCccchhHHHHHHHHHHHHHHh
Confidence            344566888888889999999998665 7888999998753