Psyllid ID: psy4579
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 368 | 2.2.26 [Sep-21-2011] | |||||||
| Q5M7K4 | 425 | Histone-binding protein R | yes | N/A | 0.059 | 0.051 | 0.901 | 3e-63 | |
| Q9W7I5 | 425 | Histone-binding protein R | yes | N/A | 0.092 | 0.08 | 0.901 | 4e-63 | |
| Q60972 | 425 | Histone-binding protein R | yes | N/A | 0.092 | 0.08 | 0.901 | 4e-63 | |
| Q09028 | 425 | Histone-binding protein R | yes | N/A | 0.092 | 0.08 | 0.901 | 4e-63 | |
| Q3MHL3 | 425 | Histone-binding protein R | yes | N/A | 0.092 | 0.08 | 0.901 | 4e-63 | |
| Q5RF92 | 425 | Histone-binding protein R | yes | N/A | 0.092 | 0.08 | 0.901 | 4e-63 | |
| Q6INH0 | 425 | Histone-binding protein R | N/A | N/A | 0.769 | 0.665 | 0.418 | 8e-63 | |
| Q6P3H7 | 424 | Histone-binding protein R | yes | N/A | 0.114 | 0.099 | 0.885 | 2e-62 | |
| Q24572 | 430 | Probable histone-binding | yes | N/A | 0.119 | 0.102 | 0.893 | 2e-61 | |
| O93377 | 425 | Histone-binding protein R | N/A | N/A | 0.092 | 0.08 | 0.868 | 3e-61 |
| >sp|Q5M7K4|RBBP4_XENTR Histone-binding protein RBBP4 OS=Xenopus tropicalis GN=rbbp4 PE=2 SV=3 | Back alignment and function desciption |
|---|
Score = 242 bits (618), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 110/122 (90%), Positives = 122/122 (100%)
Query: 235 EDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIE 294
+D+SIHRL+LGTHTSDEQNHL+IASVQLPN+DAQFDAS+YD++KG+FGGFGSVSGKIEIE
Sbjct: 59 KDFSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIE 118
Query: 295 IKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQK 354
IKINHEGEVNRARYMPQNPC+IATKTPSSDVLVFDYTKHPSKPDP+GEC+PDLRLRGHQK
Sbjct: 119 IKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQK 178
Query: 355 EG 356
EG
Sbjct: 179 EG 180
|
Core histone-binding subunit that may target chromatin assembly factors, chromatin remodeling factors and histone deacetylases to their histone substrates in a manner that is regulated by nucleosomal DNA. Xenopus tropicalis (taxid: 8364) |
| >sp|Q9W7I5|RBBP4_CHICK Histone-binding protein RBBP4 OS=Gallus gallus GN=RBBP4 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 242 bits (617), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 110/122 (90%), Positives = 122/122 (100%)
Query: 235 EDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIE 294
+D+SIHRL+LGTHTSDEQNHL+IASVQLPN+DAQFDAS+YD++KG+FGGFGSVSGKIEIE
Sbjct: 59 KDFSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIE 118
Query: 295 IKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQK 354
IKINHEGEVNRARYMPQNPC+IATKTPSSDVLVFDYTKHPSKPDP+GEC+PDLRLRGHQK
Sbjct: 119 IKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQK 178
Query: 355 EG 356
EG
Sbjct: 179 EG 180
|
Core histone-binding subunit that may target chromatin assembly factors, chromatin remodeling factors and histone deacetylases to their histone substrates in a manner that is regulated by nucleosomal DNA. Gallus gallus (taxid: 9031) |
| >sp|Q60972|RBBP4_MOUSE Histone-binding protein RBBP4 OS=Mus musculus GN=Rbbp4 PE=1 SV=5 | Back alignment and function description |
|---|
Score = 242 bits (617), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 110/122 (90%), Positives = 122/122 (100%)
Query: 235 EDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIE 294
+D+SIHRL+LGTHTSDEQNHL+IASVQLPN+DAQFDAS+YD++KG+FGGFGSVSGKIEIE
Sbjct: 59 KDFSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIE 118
Query: 295 IKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQK 354
IKINHEGEVNRARYMPQNPC+IATKTPSSDVLVFDYTKHPSKPDP+GEC+PDLRLRGHQK
Sbjct: 119 IKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQK 178
Query: 355 EG 356
EG
Sbjct: 179 EG 180
|
Core histone-binding subunit that may target chromatin assembly factors, chromatin remodeling factors and histone deacetylases to their histone substrates in a manner that is regulated by nucleosomal DNA. Component of several complexes which regulate chromatin metabolism. These include the chromatin assembly factor 1 (CAF-1) complex, which is required for chromatin assembly following DNA replication and DNA repair; the core histone deacetylase (HDAC) complex, which promotes histone deacetylation and consequent transcriptional repression; the nucleosome remodeling and histone deacetylase complex (the NuRD complex), which promotes transcriptional repression by histone deacetylation and nucleosome remodeling; and the PRC2/EED-EZH2 complex, which promotes repression of homeotic genes during development; and the NURF (nucleosome remodeling factor) complex. Mus musculus (taxid: 10090) |
| >sp|Q09028|RBBP4_HUMAN Histone-binding protein RBBP4 OS=Homo sapiens GN=RBBP4 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 242 bits (617), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 110/122 (90%), Positives = 122/122 (100%)
Query: 235 EDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIE 294
+D+SIHRL+LGTHTSDEQNHL+IASVQLPN+DAQFDAS+YD++KG+FGGFGSVSGKIEIE
Sbjct: 59 KDFSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIE 118
Query: 295 IKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQK 354
IKINHEGEVNRARYMPQNPC+IATKTPSSDVLVFDYTKHPSKPDP+GEC+PDLRLRGHQK
Sbjct: 119 IKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQK 178
Query: 355 EG 356
EG
Sbjct: 179 EG 180
|
Core histone-binding subunit that may target chromatin assembly factors, chromatin remodeling factors and histone deacetylases to their histone substrates in a manner that is regulated by nucleosomal DNA. Component of several complexes which regulate chromatin metabolism. These include the chromatin assembly factor 1 (CAF-1) complex, which is required for chromatin assembly following DNA replication and DNA repair; the core histone deacetylase (HDAC) complex, which promotes histone deacetylation and consequent transcriptional repression; the nucleosome remodeling and histone deacetylase complex (the NuRD complex), which promotes transcriptional repression by histone deacetylation and nucleosome remodeling; the PRC2/EED-EZH2 complex, which promotes repression of homeotic genes during development; and the NURF (nucleosome remodeling factor) complex. Homo sapiens (taxid: 9606) |
| >sp|Q3MHL3|RBBP4_BOVIN Histone-binding protein RBBP4 OS=Bos taurus GN=RBBP4 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 242 bits (617), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 110/122 (90%), Positives = 122/122 (100%)
Query: 235 EDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIE 294
+D+SIHRL+LGTHTSDEQNHL+IASVQLPN+DAQFDAS+YD++KG+FGGFGSVSGKIEIE
Sbjct: 59 KDFSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIE 118
Query: 295 IKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQK 354
IKINHEGEVNRARYMPQNPC+IATKTPSSDVLVFDYTKHPSKPDP+GEC+PDLRLRGHQK
Sbjct: 119 IKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQK 178
Query: 355 EG 356
EG
Sbjct: 179 EG 180
|
Core histone-binding subunit that may target chromatin assembly factors, chromatin remodeling factors and histone deacetylases to their histone substrates in a manner that is regulated by nucleosomal DNA. Component of several complexes which regulate chromatin metabolism. These include the chromatin assembly factor 1 (CAF-1) complex, which is required for chromatin assembly following DNA replication and DNA repair; the core histone deacetylase (HDAC) complex, which promotes histone deacetylation and consequent transcriptional repression; the nucleosome remodeling and histone deacetylase complex (the NuRD complex), which promotes transcriptional repression by histone deacetylation and nucleosome remodeling; and the PRC2/EED-EZH2 complex, which promotes repression of homeotic genes during development; and the NURF (nucleosome remodeling factor) complex. Bos taurus (taxid: 9913) |
| >sp|Q5RF92|RBBP4_PONAB Histone-binding protein RBBP4 OS=Pongo abelii GN=RBBP4 PE=2 SV=3 | Back alignment and function description |
|---|
Score = 242 bits (617), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 110/122 (90%), Positives = 122/122 (100%)
Query: 235 EDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIE 294
+D+SIHRL+LGTHTSDEQNHL+IASVQLPN+DAQFDAS+YD++KG+FGGFGSVSGKIEIE
Sbjct: 59 KDFSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIE 118
Query: 295 IKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQK 354
IKINHEGEVNRARYMPQNPC+IATKTPSSDVLVFDYTKHPSKPDP+GEC+PDLRLRGHQK
Sbjct: 119 IKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQK 178
Query: 355 EG 356
EG
Sbjct: 179 EG 180
|
Core histone-binding subunit that may target chromatin assembly factors, chromatin remodeling factors and histone deacetylases to their histone substrates in a manner that is regulated by nucleosomal DNA. Component of several complexes which regulate chromatin metabolism. These include the chromatin assembly factor 1 (CAF-1) complex, which is required for chromatin assembly following DNA replication and DNA repair; the core histone deacetylase (HDAC) complex, which promotes histone deacetylation and consequent transcriptional repression; the nucleosome remodeling and histone deacetylase complex (the NuRD complex), which promotes transcriptional repression by histone deacetylation and nucleosome remodeling; and the PRC2/EED-EZH2 complex, which promotes repression of homeotic genes during development; and the NURF (nucleosome remodeling factor) complex. Pongo abelii (taxid: 9601) |
| >sp|Q6INH0|RBP4B_XENLA Histone-binding protein RBBP4-B OS=Xenopus laevis GN=rbbp4-b PE=1 SV=3 | Back alignment and function description |
|---|
Score = 241 bits (614), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 161/385 (41%), Positives = 207/385 (53%), Gaps = 102/385 (26%)
Query: 7 FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDA 66
FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVT D + D
Sbjct: 8 FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVT-----RPDGK-DF 61
Query: 67 SNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKG---------GNVQLP--- 114
S + GTHTSDEQNHL+IASVQLPN+DAQFDAS+YD++KG G +++
Sbjct: 62 SIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKI 121
Query: 115 NEDAQFDASNY------------------------------------------DTDKGGY 132
N + + + + Y K GY
Sbjct: 122 NHEGEVNRARYMPQNPCIIATKTPSCDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGY 181
Query: 133 GLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPS 192
GLSWNP+L+G LLSASDDHTICLWDI+A PKE +V+DAKTIFTGHTAVVE +SW+
Sbjct: 182 GLSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVE---DVSWHLL 238
Query: 193 LNGYLLSASDDHTICLWDI--NATPKENRVIDAKTIFTGHTAVVEDYSIH---RLILGTH 247
S +DD + +WD N T K + +DA HTA V S + IL T
Sbjct: 239 HESLFGSVADDQKLMIWDTRSNNTSKPSHSVDA------HTAEVNCLSFNPYSEFILATG 292
Query: 248 TSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRAR 307
++D+ L +D N K+++ +H+ E+ + +
Sbjct: 293 SADKTVAL-------------WDLRNL---------------KLKLHSFESHKDEIFQVQ 324
Query: 308 YMPQNPCVIATKTPSSDVLVFDYTK 332
+ P N ++A+ + V+D +K
Sbjct: 325 WSPHNETILASSGTDRRLNVWDLSK 349
|
Core histone-binding subunit that may target chromatin assembly factors, chromatin remodeling factors and histone deacetylases to their histone substrates in a manner that is regulated by nucleosomal DNA. Xenopus laevis (taxid: 8355) |
| >sp|Q6P3H7|RBBP4_DANRE Histone-binding protein RBBP4 OS=Danio rerio GN=rbbp4 PE=2 SV=3 | Back alignment and function description |
|---|
Score = 240 bits (612), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 108/122 (88%), Positives = 121/122 (99%)
Query: 235 EDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIE 294
+D+S+HRL+LGTHTSDEQNHL+IASVQLPN+DAQFDAS+YD++KG+FGGFGSVSGKIEIE
Sbjct: 59 KDFSVHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIE 118
Query: 295 IKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQK 354
IKINHEGEVNRARYMPQNPC+IATKTP+SDVLVFDYTKHPSKPDP+GEC PDLRLRGHQK
Sbjct: 119 IKINHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECTPDLRLRGHQK 178
Query: 355 EG 356
EG
Sbjct: 179 EG 180
|
Core histone-binding subunit that may target chromatin assembly factors, chromatin remodeling factors and histone deacetylases to their histone substrates in a manner that is regulated by nucleosomal DNA. Danio rerio (taxid: 7955) |
| >sp|Q24572|CAF1_DROME Probable histone-binding protein Caf1 OS=Drosophila melanogaster GN=Caf1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 236 bits (603), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 109/122 (89%), Positives = 117/122 (95%)
Query: 235 EDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIE 294
+DYS+HRLILGTHTSDEQNHLLIASVQLP+EDAQFD S+YD +KG+FGGFGSV GKIEIE
Sbjct: 63 KDYSVHRLILGTHTSDEQNHLLIASVQLPSEDAQFDGSHYDNEKGEFGGFGSVCGKIEIE 122
Query: 295 IKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQK 354
IKINHEGEVNRARYMPQN CVIATKTPSSDVLVFDYTKHPSKP+P+GEC PDLRLRGHQK
Sbjct: 123 IKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQK 182
Query: 355 EG 356
EG
Sbjct: 183 EG 184
|
Core histone-binding subunit that may target chromatin assembly factors, chromatin remodeling factors and histone deacetylases to their histone substrates in a manner that is regulated by nucleosomal DNA. Component of several complexes which regulate chromatin metabolism. These include the chromatin assembly factor 1 (CAF-1) complex, which is required for chromatin assembly following DNA replication and DNA repair; the nucleosome remodeling and deacetylase complex (the NuRD complex), which promotes transcriptional repression by histone deacetylation and nucleosome remodeling; the nucleosome remodeling factor (NURF) complex, which catalyzes ATP-dependent nucleosome sliding and facilitates transcription of chromatin; and the polycomb group (PcG) repressor complex ESC-E(Z), which promotes repression of homeotic genes during development. Also required for transcriptional repression of E2F target genes by E2f2 and Rbf or Rbf2. Drosophila melanogaster (taxid: 7227) |
| >sp|O93377|RBP4A_XENLA Histone-binding protein RBBP4-A OS=Xenopus laevis GN=rbbp4-a PE=1 SV=3 | Back alignment and function description |
|---|
Score = 236 bits (601), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 106/122 (86%), Positives = 121/122 (99%)
Query: 235 EDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIE 294
+D+SIHRL+LGTHTSDEQNHL+IASVQLPN+DAQFDAS+YD++KG+FGGFGSVSGKIEIE
Sbjct: 59 KDFSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIE 118
Query: 295 IKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQK 354
IKI H+GEVNRARYMPQNPC+IATKTP+SDVLVFDYTKHPSKPDP+GEC+P+LRLRGHQK
Sbjct: 119 IKITHDGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECNPNLRLRGHQK 178
Query: 355 EG 356
EG
Sbjct: 179 EG 180
|
Core histone-binding subunit that may target chromatin assembly factors, chromatin remodeling factors and histone deacetylases to their histone substrates in a manner that is regulated by nucleosomal DNA. Xenopus laevis (taxid: 8355) |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 368 | ||||||
| 332022144 | 478 | Putative histone-binding protein Caf1 [A | 0.059 | 0.046 | 0.950 | 7e-64 | |
| 307206335 | 428 | Probable histone-binding protein Caf1 [H | 0.059 | 0.051 | 0.950 | 8e-64 | |
| 345483539 | 427 | PREDICTED: probable histone-binding prot | 0.092 | 0.079 | 0.950 | 1e-63 | |
| 156553332 | 431 | PREDICTED: probable histone-binding prot | 0.092 | 0.078 | 0.950 | 1e-63 | |
| 321465178 | 427 | hypothetical protein DAPPUDRAFT_306287 [ | 0.059 | 0.051 | 0.942 | 2e-63 | |
| 322785127 | 421 | hypothetical protein SINV_06743 [Solenop | 0.059 | 0.052 | 0.950 | 2e-63 | |
| 242011942 | 427 | retinoblastoma-binding protein, putative | 0.059 | 0.051 | 0.942 | 2e-63 | |
| 91089627 | 427 | PREDICTED: similar to retinoblastoma-bin | 0.059 | 0.051 | 0.950 | 2e-63 | |
| 66534191 | 427 | PREDICTED: probable histone-binding prot | 0.059 | 0.051 | 0.942 | 5e-63 | |
| 380019039 | 427 | PREDICTED: LOW QUALITY PROTEIN: probable | 0.059 | 0.051 | 0.942 | 6e-63 |
| >gi|332022144|gb|EGI62466.1| Putative histone-binding protein Caf1 [Acromyrmex echinatior] | Back alignment and taxonomy information |
|---|
Score = 250 bits (639), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 116/122 (95%), Positives = 121/122 (99%)
Query: 235 EDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIE 294
+DYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDAS+YD +KG+FGGFGSVSGKIEIE
Sbjct: 112 KDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASHYDNEKGEFGGFGSVSGKIEIE 171
Query: 295 IKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQK 354
IKINHEGEVNRAR+MPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQK
Sbjct: 172 IKINHEGEVNRARFMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQK 231
Query: 355 EG 356
EG
Sbjct: 232 EG 233
|
Source: Acromyrmex echinatior Species: Acromyrmex echinatior Genus: Acromyrmex Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|307206335|gb|EFN84392.1| Probable histone-binding protein Caf1 [Harpegnathos saltator] | Back alignment and taxonomy information |
|---|
Score = 250 bits (638), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 116/122 (95%), Positives = 121/122 (99%)
Query: 235 EDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIE 294
+DYS+HRLILGTHTSDEQNHLLIASVQLPNEDAQFDAS+YD +KG+FGGFGSVSGKIEIE
Sbjct: 61 KDYSVHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASHYDNEKGEFGGFGSVSGKIEIE 120
Query: 295 IKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQK 354
IKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQK
Sbjct: 121 IKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQK 180
Query: 355 EG 356
EG
Sbjct: 181 EG 182
|
Source: Harpegnathos saltator Species: Harpegnathos saltator Genus: Harpegnathos Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|345483539|ref|XP_003424838.1| PREDICTED: probable histone-binding protein Caf1 isoform 2 [Nasonia vitripennis] | Back alignment and taxonomy information |
|---|
Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 116/122 (95%), Positives = 121/122 (99%)
Query: 235 EDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIE 294
+DY+IHRLILGTHTSDEQNHLLIASVQLPNEDAQFDAS+YD +KG+FGGFGSVSGKIEIE
Sbjct: 60 KDYTIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASHYDNEKGEFGGFGSVSGKIEIE 119
Query: 295 IKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQK 354
IKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQK
Sbjct: 120 IKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQK 179
Query: 355 EG 356
EG
Sbjct: 180 EG 181
|
Source: Nasonia vitripennis Species: Nasonia vitripennis Genus: Nasonia Family: Pteromalidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|156553332|ref|XP_001602921.1| PREDICTED: probable histone-binding protein Caf1 isoform 1 [Nasonia vitripennis] | Back alignment and taxonomy information |
|---|
Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 116/122 (95%), Positives = 121/122 (99%)
Query: 235 EDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIE 294
+DY+IHRLILGTHTSDEQNHLLIASVQLPNEDAQFDAS+YD +KG+FGGFGSVSGKIEIE
Sbjct: 64 KDYTIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASHYDNEKGEFGGFGSVSGKIEIE 123
Query: 295 IKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQK 354
IKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQK
Sbjct: 124 IKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQK 183
Query: 355 EG 356
EG
Sbjct: 184 EG 185
|
Source: Nasonia vitripennis Species: Nasonia vitripennis Genus: Nasonia Family: Pteromalidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|321465178|gb|EFX76181.1| hypothetical protein DAPPUDRAFT_306287 [Daphnia pulex] | Back alignment and taxonomy information |
|---|
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 115/122 (94%), Positives = 121/122 (99%)
Query: 235 EDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIE 294
+DYS+HRLILGTHTSDEQNHLLIASVQLPNEDAQFDAS+YD DKG+FGGFGSVSGKIEIE
Sbjct: 60 KDYSVHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASHYDNDKGEFGGFGSVSGKIEIE 119
Query: 295 IKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQK 354
IKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPS+PDP+GECHPDLRLRGHQK
Sbjct: 120 IKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSRPDPSGECHPDLRLRGHQK 179
Query: 355 EG 356
EG
Sbjct: 180 EG 181
|
Source: Daphnia pulex Species: Daphnia pulex Genus: Daphnia Family: Daphniidae Order: Diplostraca Class: Branchiopoda Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|322785127|gb|EFZ11851.1| hypothetical protein SINV_06743 [Solenopsis invicta] | Back alignment and taxonomy information |
|---|
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 116/122 (95%), Positives = 121/122 (99%)
Query: 235 EDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIE 294
+DYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDAS+YD +KG+FGGFGSVSGKIEIE
Sbjct: 54 KDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASHYDNEKGEFGGFGSVSGKIEIE 113
Query: 295 IKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQK 354
IKINHEGEVNRAR+MPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQK
Sbjct: 114 IKINHEGEVNRARFMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQK 173
Query: 355 EG 356
EG
Sbjct: 174 EG 175
|
Source: Solenopsis invicta Species: Solenopsis invicta Genus: Solenopsis Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|242011942|ref|XP_002426702.1| retinoblastoma-binding protein, putative [Pediculus humanus corporis] gi|242011944|ref|XP_002426703.1| retinoblastoma-binding protein, putative [Pediculus humanus corporis] gi|212510873|gb|EEB13964.1| retinoblastoma-binding protein, putative [Pediculus humanus corporis] gi|212510874|gb|EEB13965.1| retinoblastoma-binding protein, putative [Pediculus humanus corporis] | Back alignment and taxonomy information |
|---|
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 115/122 (94%), Positives = 121/122 (99%)
Query: 235 EDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIE 294
+DYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDAS+YD ++G+FGGFGSVSGKIEIE
Sbjct: 60 KDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASHYDNERGEFGGFGSVSGKIEIE 119
Query: 295 IKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQK 354
IKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDP+GECHPDLRLRGHQK
Sbjct: 120 IKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPSGECHPDLRLRGHQK 179
Query: 355 EG 356
EG
Sbjct: 180 EG 181
|
Source: Pediculus humanus corporis Species: Pediculus humanus Genus: Pediculus Family: Pediculidae Order: Phthiraptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|91089627|ref|XP_973479.1| PREDICTED: similar to retinoblastoma-binding protein 4 (rbbp4) [Tribolium castaneum] gi|270012612|gb|EFA09060.1| hypothetical protein TcasGA2_TC006775 [Tribolium castaneum] | Back alignment and taxonomy information |
|---|
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 116/122 (95%), Positives = 121/122 (99%)
Query: 235 EDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIE 294
+D+SIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDAS+YD +KG+FGGFGSVSGKIEIE
Sbjct: 61 KDHSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASHYDNEKGEFGGFGSVSGKIEIE 120
Query: 295 IKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQK 354
IKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQK
Sbjct: 121 IKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQK 180
Query: 355 EG 356
EG
Sbjct: 181 EG 182
|
Source: Tribolium castaneum Species: Tribolium castaneum Genus: Tribolium Family: Tenebrionidae Order: Coleoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|66534191|ref|XP_624580.1| PREDICTED: probable histone-binding protein Caf1 [Apis mellifera] gi|340711092|ref|XP_003394115.1| PREDICTED: probable histone-binding protein Caf1-like [Bombus terrestris] gi|350405600|ref|XP_003487490.1| PREDICTED: probable histone-binding protein Caf1-like [Bombus impatiens] gi|383865389|ref|XP_003708156.1| PREDICTED: probable histone-binding protein Caf1-like [Megachile rotundata] | Back alignment and taxonomy information |
|---|
Score = 247 bits (631), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 115/122 (94%), Positives = 120/122 (98%)
Query: 235 EDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIE 294
+DYS+HRLILGTHTSDEQNHLLIASVQLPNEDAQFDAS+YD +KG+FGGFGSVSGKIEIE
Sbjct: 60 KDYSVHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASHYDNEKGEFGGFGSVSGKIEIE 119
Query: 295 IKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQK 354
IKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGEC PDLRLRGHQK
Sbjct: 120 IKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECQPDLRLRGHQK 179
Query: 355 EG 356
EG
Sbjct: 180 EG 181
|
Source: Apis mellifera Species: Apis mellifera Genus: Apis Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|380019039|ref|XP_003693425.1| PREDICTED: LOW QUALITY PROTEIN: probable histone-binding protein Caf1-like [Apis florea] | Back alignment and taxonomy information |
|---|
Score = 247 bits (631), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 115/122 (94%), Positives = 120/122 (98%)
Query: 235 EDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIE 294
+DYS+HRLILGTHTSDEQNHLLIASVQLPNEDAQFDAS+YD +KG+FGGFGSVSGKIEIE
Sbjct: 60 KDYSVHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASHYDNEKGEFGGFGSVSGKIEIE 119
Query: 295 IKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQK 354
IKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGEC PDLRLRGHQK
Sbjct: 120 IKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECQPDLRLRGHQK 179
Query: 355 EG 356
EG
Sbjct: 180 EG 181
|
Source: Apis florea Species: Apis florea Genus: Apis Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 368 | ||||||
| UNIPROTKB|F2Z4M0 | 425 | RBBP4 "Histone-binding protein | 0.633 | 0.548 | 0.544 | 3.3e-65 | |
| UNIPROTKB|Q9W7I5 | 425 | RBBP4 "Histone-binding protein | 0.633 | 0.548 | 0.544 | 3.3e-65 | |
| UNIPROTKB|Q3MHL3 | 425 | RBBP4 "Histone-binding protein | 0.633 | 0.548 | 0.544 | 3.3e-65 | |
| UNIPROTKB|E2QXR8 | 425 | RBBP4 "Uncharacterized protein | 0.633 | 0.548 | 0.544 | 3.3e-65 | |
| UNIPROTKB|Q09028 | 425 | RBBP4 "Histone-binding protein | 0.633 | 0.548 | 0.544 | 3.3e-65 | |
| MGI|MGI:1194912 | 425 | Rbbp4 "retinoblastoma binding | 0.633 | 0.548 | 0.544 | 3.3e-65 | |
| RGD|1593768 | 425 | Rbbp4 "retinoblastoma binding | 0.633 | 0.548 | 0.544 | 3.3e-65 | |
| UNIPROTKB|Q5RF92 | 425 | RBBP4 "Histone-binding protein | 0.633 | 0.548 | 0.540 | 1.1e-64 | |
| UNIPROTKB|Q6INH0 | 425 | rbbp4-b "Histone-binding prote | 0.633 | 0.548 | 0.540 | 1.8e-64 | |
| UNIPROTKB|O93377 | 425 | rbbp4-a "Histone-binding prote | 0.633 | 0.548 | 0.544 | 4.8e-64 |
| UNIPROTKB|F2Z4M0 RBBP4 "Histone-binding protein RBBP4" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 632 (227.5 bits), Expect = 3.3e-65, Sum P(2) = 3.3e-65
Identities = 140/257 (54%), Positives = 174/257 (67%)
Query: 7 FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDA 66
FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVT P E F
Sbjct: 8 FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTR---P-EGKDF-- 61
Query: 67 SNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKG--GNVQLPNEDAQFDAS- 123
S + GTHTSDEQNHL+IASVQLPN+DAQFDAS+YD++KG G + + +
Sbjct: 62 SIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKI 121
Query: 124 NYD--TDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKE---NRVIDAKTIFTGHT 178
N++ ++ Y + NP + +SD + ++D P + + + GH
Sbjct: 122 NHEGEVNRARY-MPQNPCIIATKTPSSD---VLVFDYTKHPSKPDPSGECNPDLRLRGHQ 177
Query: 179 AVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYS 238
+ YGLSWNP+L+G+LLSASDDHTICLWDI+A PKE +V+DAKTIFTGHTAVVED S
Sbjct: 178 ---KEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVS 234
Query: 239 ---IHRLILGTHTSDEQ 252
+H + G+ D++
Sbjct: 235 WHLLHESLFGSVADDQK 251
|
|
| UNIPROTKB|Q9W7I5 RBBP4 "Histone-binding protein RBBP4" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 632 (227.5 bits), Expect = 3.3e-65, Sum P(2) = 3.3e-65
Identities = 140/257 (54%), Positives = 174/257 (67%)
Query: 7 FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDA 66
FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVT P E F
Sbjct: 8 FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTR---P-EGKDF-- 61
Query: 67 SNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKG--GNVQLPNEDAQFDAS- 123
S + GTHTSDEQNHL+IASVQLPN+DAQFDAS+YD++KG G + + +
Sbjct: 62 SIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKI 121
Query: 124 NYD--TDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKE---NRVIDAKTIFTGHT 178
N++ ++ Y + NP + +SD + ++D P + + + GH
Sbjct: 122 NHEGEVNRARY-MPQNPCIIATKTPSSD---VLVFDYTKHPSKPDPSGECNPDLRLRGHQ 177
Query: 179 AVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYS 238
+ YGLSWNP+L+G+LLSASDDHTICLWDI+A PKE +V+DAKTIFTGHTAVVED S
Sbjct: 178 ---KEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVS 234
Query: 239 ---IHRLILGTHTSDEQ 252
+H + G+ D++
Sbjct: 235 WHLLHESLFGSVADDQK 251
|
|
| UNIPROTKB|Q3MHL3 RBBP4 "Histone-binding protein RBBP4" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 632 (227.5 bits), Expect = 3.3e-65, Sum P(2) = 3.3e-65
Identities = 140/257 (54%), Positives = 174/257 (67%)
Query: 7 FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDA 66
FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVT P E F
Sbjct: 8 FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTR---P-EGKDF-- 61
Query: 67 SNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKG--GNVQLPNEDAQFDAS- 123
S + GTHTSDEQNHL+IASVQLPN+DAQFDAS+YD++KG G + + +
Sbjct: 62 SIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKI 121
Query: 124 NYD--TDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKE---NRVIDAKTIFTGHT 178
N++ ++ Y + NP + +SD + ++D P + + + GH
Sbjct: 122 NHEGEVNRARY-MPQNPCIIATKTPSSD---VLVFDYTKHPSKPDPSGECNPDLRLRGHQ 177
Query: 179 AVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYS 238
+ YGLSWNP+L+G+LLSASDDHTICLWDI+A PKE +V+DAKTIFTGHTAVVED S
Sbjct: 178 ---KEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVS 234
Query: 239 ---IHRLILGTHTSDEQ 252
+H + G+ D++
Sbjct: 235 WHLLHESLFGSVADDQK 251
|
|
| UNIPROTKB|E2QXR8 RBBP4 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 632 (227.5 bits), Expect = 3.3e-65, Sum P(2) = 3.3e-65
Identities = 140/257 (54%), Positives = 174/257 (67%)
Query: 7 FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDA 66
FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVT P E F
Sbjct: 8 FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTR---P-EGKDF-- 61
Query: 67 SNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKG--GNVQLPNEDAQFDAS- 123
S + GTHTSDEQNHL+IASVQLPN+DAQFDAS+YD++KG G + + +
Sbjct: 62 SIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKI 121
Query: 124 NYD--TDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKE---NRVIDAKTIFTGHT 178
N++ ++ Y + NP + +SD + ++D P + + + GH
Sbjct: 122 NHEGEVNRARY-MPQNPCIIATKTPSSD---VLVFDYTKHPSKPDPSGECNPDLRLRGHQ 177
Query: 179 AVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYS 238
+ YGLSWNP+L+G+LLSASDDHTICLWDI+A PKE +V+DAKTIFTGHTAVVED S
Sbjct: 178 ---KEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVS 234
Query: 239 ---IHRLILGTHTSDEQ 252
+H + G+ D++
Sbjct: 235 WHLLHESLFGSVADDQK 251
|
|
| UNIPROTKB|Q09028 RBBP4 "Histone-binding protein RBBP4" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 632 (227.5 bits), Expect = 3.3e-65, Sum P(2) = 3.3e-65
Identities = 140/257 (54%), Positives = 174/257 (67%)
Query: 7 FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDA 66
FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVT P E F
Sbjct: 8 FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTR---P-EGKDF-- 61
Query: 67 SNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKG--GNVQLPNEDAQFDAS- 123
S + GTHTSDEQNHL+IASVQLPN+DAQFDAS+YD++KG G + + +
Sbjct: 62 SIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKI 121
Query: 124 NYD--TDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKE---NRVIDAKTIFTGHT 178
N++ ++ Y + NP + +SD + ++D P + + + GH
Sbjct: 122 NHEGEVNRARY-MPQNPCIIATKTPSSD---VLVFDYTKHPSKPDPSGECNPDLRLRGHQ 177
Query: 179 AVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYS 238
+ YGLSWNP+L+G+LLSASDDHTICLWDI+A PKE +V+DAKTIFTGHTAVVED S
Sbjct: 178 ---KEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVS 234
Query: 239 ---IHRLILGTHTSDEQ 252
+H + G+ D++
Sbjct: 235 WHLLHESLFGSVADDQK 251
|
|
| MGI|MGI:1194912 Rbbp4 "retinoblastoma binding protein 4" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 632 (227.5 bits), Expect = 3.3e-65, Sum P(2) = 3.3e-65
Identities = 140/257 (54%), Positives = 174/257 (67%)
Query: 7 FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDA 66
FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVT P E F
Sbjct: 8 FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTR---P-EGKDF-- 61
Query: 67 SNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKG--GNVQLPNEDAQFDAS- 123
S + GTHTSDEQNHL+IASVQLPN+DAQFDAS+YD++KG G + + +
Sbjct: 62 SIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKI 121
Query: 124 NYD--TDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKE---NRVIDAKTIFTGHT 178
N++ ++ Y + NP + +SD + ++D P + + + GH
Sbjct: 122 NHEGEVNRARY-MPQNPCIIATKTPSSD---VLVFDYTKHPSKPDPSGECNPDLRLRGHQ 177
Query: 179 AVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYS 238
+ YGLSWNP+L+G+LLSASDDHTICLWDI+A PKE +V+DAKTIFTGHTAVVED S
Sbjct: 178 ---KEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVS 234
Query: 239 ---IHRLILGTHTSDEQ 252
+H + G+ D++
Sbjct: 235 WHLLHESLFGSVADDQK 251
|
|
| RGD|1593768 Rbbp4 "retinoblastoma binding protein 4" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 632 (227.5 bits), Expect = 3.3e-65, Sum P(2) = 3.3e-65
Identities = 140/257 (54%), Positives = 174/257 (67%)
Query: 7 FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDA 66
FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVT P E F
Sbjct: 8 FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTR---P-EGKDF-- 61
Query: 67 SNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKG--GNVQLPNEDAQFDAS- 123
S + GTHTSDEQNHL+IASVQLPN+DAQFDAS+YD++KG G + + +
Sbjct: 62 SIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKI 121
Query: 124 NYD--TDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKE---NRVIDAKTIFTGHT 178
N++ ++ Y + NP + +SD + ++D P + + + GH
Sbjct: 122 NHEGEVNRARY-MPQNPCIIATKTPSSD---VLVFDYTKHPSKPDPSGECNPDLRLRGHQ 177
Query: 179 AVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYS 238
+ YGLSWNP+L+G+LLSASDDHTICLWDI+A PKE +V+DAKTIFTGHTAVVED S
Sbjct: 178 ---KEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVS 234
Query: 239 ---IHRLILGTHTSDEQ 252
+H + G+ D++
Sbjct: 235 WHLLHESLFGSVADDQK 251
|
|
| UNIPROTKB|Q5RF92 RBBP4 "Histone-binding protein RBBP4" [Pongo abelii (taxid:9601)] | Back alignment and assigned GO terms |
|---|
Score = 627 (225.8 bits), Expect = 1.1e-64, Sum P(2) = 1.1e-64
Identities = 139/257 (54%), Positives = 174/257 (67%)
Query: 7 FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDA 66
FDDAVEERVINEE+KIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVT P E F
Sbjct: 8 FDDAVEERVINEEHKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTR---P-EGKDF-- 61
Query: 67 SNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKG--GNVQLPNEDAQFDAS- 123
S + GTHTSDEQNHL+IASVQLPN+DAQFDAS+YD++KG G + + +
Sbjct: 62 SIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKI 121
Query: 124 NYD--TDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKE---NRVIDAKTIFTGHT 178
N++ ++ Y + NP + +SD + ++D P + + + GH
Sbjct: 122 NHEGEVNRARY-MPQNPCIIATKTPSSD---VLVFDYTKHPSKPDPSGECNPDLRLRGHQ 177
Query: 179 AVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYS 238
+ YGLSWNP+L+G+LLSASDDHTICLWDI+A PKE +V+DAKTIFTGHTAVVED S
Sbjct: 178 ---KEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVS 234
Query: 239 ---IHRLILGTHTSDEQ 252
+H + G+ D++
Sbjct: 235 WHLLHESLFGSVADDQK 251
|
|
| UNIPROTKB|Q6INH0 rbbp4-b "Histone-binding protein RBBP4-B" [Xenopus laevis (taxid:8355)] | Back alignment and assigned GO terms |
|---|
Score = 625 (225.1 bits), Expect = 1.8e-64, Sum P(2) = 1.8e-64
Identities = 139/257 (54%), Positives = 173/257 (67%)
Query: 7 FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDA 66
FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVT P D + D
Sbjct: 8 FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTR---P--DGK-DF 61
Query: 67 SNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKG--GNVQLPNEDAQFDAS- 123
S + GTHTSDEQNHL+IASVQLPN+DAQFDAS+YD++KG G + + +
Sbjct: 62 SIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKI 121
Query: 124 NYD--TDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKE---NRVIDAKTIFTGHT 178
N++ ++ Y + NP + + D + ++D P + + + GH
Sbjct: 122 NHEGEVNRARY-MPQNPCIIATKTPSCD---VLVFDYTKHPSKPDPSGECNPDLRLRGHQ 177
Query: 179 AVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYS 238
+ YGLSWNP+L+G LLSASDDHTICLWDI+A PKE +V+DAKTIFTGHTAVVED S
Sbjct: 178 ---KEGYGLSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVS 234
Query: 239 ---IHRLILGTHTSDEQ 252
+H + G+ D++
Sbjct: 235 WHLLHESLFGSVADDQK 251
|
|
| UNIPROTKB|O93377 rbbp4-a "Histone-binding protein RBBP4-A" [Xenopus laevis (taxid:8355)] | Back alignment and assigned GO terms |
|---|
Score = 621 (223.7 bits), Expect = 4.8e-64, Sum P(2) = 4.8e-64
Identities = 140/257 (54%), Positives = 171/257 (66%)
Query: 7 FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDA 66
FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWL DVT P D + D
Sbjct: 8 FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLSDVTR---P--DGK-DF 61
Query: 67 SNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKG-----GNVQLPNEDAQFD 121
S + GTHTSDEQNHL+IASVQLPN+DAQFDAS+YD++KG G+V E
Sbjct: 62 SIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKI 121
Query: 122 ASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKE---NRVIDAKTIFTGHT 178
+ + ++ Y + NP + SD + ++D P + + + GH
Sbjct: 122 THDGEVNRARY-MPQNPCIIATKTPTSD---VLVFDYTKHPSKPDPSGECNPNLRLRGHQ 177
Query: 179 AVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYS 238
+ YGLSWNP+L+G LLSASDDHTICLWDI+A PKE +V+DAKTIFTGHTAVVED S
Sbjct: 178 ---KEGYGLSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVS 234
Query: 239 ---IHRLILGTHTSDEQ 252
+H + G+ D++
Sbjct: 235 WHLLHESLFGSVADDQK 251
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q54SD4 | RBBD_DICDI | No assigned EC number | 0.3236 | 0.7581 | 0.6595 | yes | N/A |
| P90916 | LIN53_CAEEL | No assigned EC number | 0.3307 | 0.7527 | 0.6642 | yes | N/A |
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 368 | |||
| pfam12265 | 73 | pfam12265, CAF1C_H4-bd, Histone-binding protein RB | 4e-24 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 1e-10 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 9e-09 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 1e-08 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 7e-08 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 5e-07 | |
| pfam12265 | 73 | pfam12265, CAF1C_H4-bd, Histone-binding protein RB | 1e-05 | |
| PTZ00420 | 568 | PTZ00420, PTZ00420, coronin; Provisional | 1e-05 | |
| pfam00400 | 39 | pfam00400, WD40, WD domain, G-beta repeat | 2e-05 | |
| COG2319 | 466 | COG2319, COG2319, FOG: WD40 repeat [General functi | 2e-05 | |
| smart00320 | 40 | smart00320, WD40, WD40 repeats | 3e-05 | |
| PTZ00421 | 493 | PTZ00421, PTZ00421, coronin; Provisional | 2e-04 | |
| pfam00400 | 39 | pfam00400, WD40, WD domain, G-beta repeat | 0.002 | |
| smart00320 | 40 | smart00320, WD40, WD40 repeats | 0.003 |
| >gnl|CDD|221499 pfam12265, CAF1C_H4-bd, Histone-binding protein RBBP4 or subunit C of CAF1 complex | Back alignment and domain information |
|---|
Score = 93.8 bits (234), Expect = 4e-24
Identities = 41/82 (50%), Positives = 52/82 (63%), Gaps = 13/82 (15%)
Query: 17 NEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDK--- 73
NEEY++WKKN PFLYD++ THALEWPSL+ WLPD+ D T +
Sbjct: 1 NEEYELWKKNDPFLYDMLHTHALEWPSLSFDWLPDLLKG---------DNRYPHTQRLLL 51
Query: 74 GTHTSD-EQNHLLIASVQLPNE 94
GT TS EQN+LL+A V LP++
Sbjct: 52 GTQTSGQEQNYLLVAKVSLPSK 73
|
The CAF-1 complex is a conserved heterotrimeric protein complex that promotes histone H3 and H4 deposition onto newly synthesized DNA during replication or DNA repair; specifically it facilitates replication-dependent nucleosome assembly with the major histone H3 (H3.1). This domain is an alpha helix which sits just upstream of the WD40 seven-bladed beta-propeller in the human RbAp46 protein. RbAp46 folds into the beta-propeller and binds histone H4 in a groove formed between this N-terminal helix and an extended loop inserted into blade six. Length = 73 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 61.2 bits (149), Expect = 1e-10
Identities = 31/98 (31%), Positives = 42/98 (42%), Gaps = 18/98 (18%)
Query: 143 YLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASD 202
YL S S D TI LWD+ T + R TGHT+ V ++++P L S+S
Sbjct: 65 YLASGSSDKTIRLWDLE-TGECVR------TLTGHTSYV---SSVAFSPD-GRILSSSSR 113
Query: 203 DHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIH 240
D TI +WD+ T GHT V +
Sbjct: 114 DKTIKVWDVETG-------KCLTTLRGHTDWVNSVAFS 144
|
Length = 289 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 55.8 bits (135), Expect = 9e-09
Identities = 31/121 (25%), Positives = 49/121 (40%), Gaps = 22/121 (18%)
Query: 129 KGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLS 188
G ++++P L + S D TI +WD+ + GHT V ++
Sbjct: 10 GGVTCVAFSPD-GKLLATGSGDGTIKVWDLETG-------ELLRTLKGHTGPV---RDVA 58
Query: 189 WNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIH---RLILG 245
+ YL S S D TI LWD+ T + R TGHT+ V + R++
Sbjct: 59 ASADGT-YLASGSSDKTIRLWDLE-TGECVR------TLTGHTSYVSSVAFSPDGRILSS 110
Query: 246 T 246
+
Sbjct: 111 S 111
|
Length = 289 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 55.4 bits (134), Expect = 1e-08
Identities = 32/113 (28%), Positives = 49/113 (43%), Gaps = 21/113 (18%)
Query: 134 LSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSL 193
++++P ++ S+S D TI LWD+ T K TGHT V ++++P
Sbjct: 141 VAFSPD-GTFVASSSQDGTIKLWDLR-TGKCVAT------LTGHTGEV---NSVAFSPDG 189
Query: 194 NGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVE--DYSIHRLIL 244
LLS+S D TI LWD++ GH V +S +L
Sbjct: 190 EK-LLSSSSDGTIKLWDLSTG-------KCLGTLRGHENGVNSVAFSPDGYLL 234
|
Length = 289 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 53.1 bits (128), Expect = 7e-08
Identities = 28/103 (27%), Positives = 46/103 (44%), Gaps = 19/103 (18%)
Query: 132 YGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNP 191
++++P LLS+S D TI LWD++ GH V ++++P
Sbjct: 181 NSVAFSPDGEK-LLSSSSDGTIKLWDLSTG-------KCLGTLRGHENGV---NSVAFSP 229
Query: 192 SLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVV 234
L S S+D TI +WD+ T + + + +GHT V
Sbjct: 230 D-GYLLASGSEDGTIRVWDLR-TGECVQTL------SGHTNSV 264
|
Length = 289 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 50.4 bits (121), Expect = 5e-07
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 12/83 (14%)
Query: 128 DKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGL 187
+ G ++++P L S S+D TI +WD+ T + + + +GHT V L
Sbjct: 219 ENGVNSVAFSPD-GYLLASGSEDGTIRVWDLR-TGECVQTL------SGHTNSV---TSL 267
Query: 188 SWNPSLNGYLLSASDDHTICLWD 210
+W+P L S S D TI +WD
Sbjct: 268 AWSPD-GKRLASGSADGTIRIWD 289
|
Length = 289 |
| >gnl|CDD|221499 pfam12265, CAF1C_H4-bd, Histone-binding protein RBBP4 or subunit C of CAF1 complex | Back alignment and domain information |
|---|
Score = 42.6 bits (101), Expect = 1e-05
Identities = 16/30 (53%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Query: 237 YSIHRLILGTHTSD-EQNHLLIASVQLPNE 265
RL+LGT TS EQN+LL+A V LP++
Sbjct: 44 PHTQRLLLGTQTSGQEQNYLLVAKVSLPSK 73
|
The CAF-1 complex is a conserved heterotrimeric protein complex that promotes histone H3 and H4 deposition onto newly synthesized DNA during replication or DNA repair; specifically it facilitates replication-dependent nucleosome assembly with the major histone H3 (H3.1). This domain is an alpha helix which sits just upstream of the WD40 seven-bladed beta-propeller in the human RbAp46 protein. RbAp46 folds into the beta-propeller and binds histone H4 in a groove formed between this N-terminal helix and an extended loop inserted into blade six. Length = 73 |
| >gnl|CDD|240412 PTZ00420, PTZ00420, coronin; Provisional | Back alignment and domain information |
|---|
Score = 46.5 bits (110), Expect = 1e-05
Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Query: 134 LSWNPSLNGYLLSASDDHTICLWDINATPKE-NRVIDAKTIFTGHTAVVEVRYGLSWNPS 192
L +NP + L S S+D TI +W+I + + D + I GH + + + WNP
Sbjct: 80 LQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISI---IDWNP- 135
Query: 193 LNGYLLSASD-DHTICLWDINATPKENRVIDAKTI 226
+N Y++ +S D + +WDI + ++ K +
Sbjct: 136 MNYYIMCSSGFDSFVNIWDIENEKRAFQINMPKKL 170
|
Length = 568 |
| >gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat | Back alignment and domain information |
|---|
Score = 41.2 bits (97), Expect = 2e-05
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 4/39 (10%)
Query: 172 TIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWD 210
GHT V ++++P L S SDD T+ +WD
Sbjct: 5 RTLKGHTGPV---TSVAFSPD-GNLLASGSDDGTVRVWD 39
|
Length = 39 |
| >gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 45.8 bits (107), Expect = 2e-05
Identities = 28/115 (24%), Positives = 47/115 (40%), Gaps = 17/115 (14%)
Query: 126 DTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRY 185
L+++P + S S D TI LWD++ ++ +GH+ V
Sbjct: 196 GHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGKLL------RSTLSGHSDSVV--- 246
Query: 186 GLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIH 240
S++P L S S D TI LWD+ ++ R +GH++ V +
Sbjct: 247 -SSFSPD-GSLLASGSSDGTIRLWDLRSSSSLLR------TLSGHSSSVLSVAFS 293
|
Length = 466 |
| >gnl|CDD|197651 smart00320, WD40, WD40 repeats | Back alignment and domain information |
|---|
Score = 40.4 bits (95), Expect = 3e-05
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 4/38 (10%)
Query: 173 IFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWD 210
GHT V ++++P YL S SDD TI LWD
Sbjct: 7 TLKGHTGPV---TSVAFSPDGK-YLASGSDDGTIKLWD 40
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40 |
| >gnl|CDD|173611 PTZ00421, PTZ00421, coronin; Provisional | Back alignment and domain information |
|---|
Score = 43.0 bits (101), Expect = 2e-04
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Query: 134 LSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSL 193
+++NP L +AS+D TI W I + D GHT V + +S++PS
Sbjct: 81 VAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGI---VSFHPSA 137
Query: 194 NGYLLSASDDHTICLWDIN 212
L SA D + +WD+
Sbjct: 138 MNVLASAGADMVVNVWDVE 156
|
Length = 493 |
| >gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat | Back alignment and domain information |
|---|
Score = 35.0 bits (81), Expect = 0.002
Identities = 9/26 (34%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Query: 132 YGLSWNPSLNGYLLSASDDHTICLWD 157
++++P L S SDD T+ +WD
Sbjct: 15 TSVAFSPD-GNLLASGSDDGTVRVWD 39
|
Length = 39 |
| >gnl|CDD|197651 smart00320, WD40, WD40 repeats | Back alignment and domain information |
|---|
Score = 34.6 bits (80), Expect = 0.003
Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Query: 132 YGLSWNPSLNGYLLSASDDHTICLWD 157
++++P YL S SDD TI LWD
Sbjct: 16 TSVAFSPDGK-YLASGSDDGTIKLWD 40
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 368 | |||
| KOG0264|consensus | 422 | 100.0 | ||
| KOG0271|consensus | 480 | 100.0 | ||
| KOG0272|consensus | 459 | 100.0 | ||
| KOG0284|consensus | 464 | 100.0 | ||
| KOG0286|consensus | 343 | 100.0 | ||
| KOG0271|consensus | 480 | 100.0 | ||
| KOG0272|consensus | 459 | 100.0 | ||
| KOG0263|consensus | 707 | 100.0 | ||
| KOG0273|consensus | 524 | 100.0 | ||
| KOG0284|consensus | 464 | 100.0 | ||
| KOG0318|consensus | 603 | 99.97 | ||
| KOG0645|consensus | 312 | 99.97 | ||
| KOG0295|consensus | 406 | 99.97 | ||
| KOG0279|consensus | 315 | 99.96 | ||
| KOG0263|consensus | 707 | 99.96 | ||
| KOG0277|consensus | 311 | 99.96 | ||
| KOG0285|consensus | 460 | 99.96 | ||
| KOG0292|consensus | 1202 | 99.96 | ||
| KOG0266|consensus | 456 | 99.96 | ||
| KOG0279|consensus | 315 | 99.96 | ||
| KOG0276|consensus | 794 | 99.96 | ||
| KOG0313|consensus | 423 | 99.96 | ||
| KOG0264|consensus | 422 | 99.96 | ||
| KOG0277|consensus | 311 | 99.95 | ||
| KOG0265|consensus | 338 | 99.95 | ||
| KOG0286|consensus | 343 | 99.95 | ||
| KOG0315|consensus | 311 | 99.94 | ||
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.94 | |
| KOG0291|consensus | 893 | 99.94 | ||
| KOG0281|consensus | 499 | 99.94 | ||
| KOG0315|consensus | 311 | 99.94 | ||
| KOG0276|consensus | 794 | 99.94 | ||
| KOG0282|consensus | 503 | 99.94 | ||
| KOG0273|consensus | 524 | 99.94 | ||
| KOG0275|consensus | 508 | 99.94 | ||
| KOG0319|consensus | 775 | 99.94 | ||
| KOG0296|consensus | 399 | 99.94 | ||
| KOG0281|consensus | 499 | 99.94 | ||
| cd00200 | 289 | WD40 WD40 domain, found in a number of eukaryotic | 99.94 | |
| KOG0319|consensus | 775 | 99.94 | ||
| KOG0316|consensus | 307 | 99.94 | ||
| KOG1446|consensus | 311 | 99.94 | ||
| KOG0285|consensus | 460 | 99.93 | ||
| KOG0265|consensus | 338 | 99.93 | ||
| KOG0318|consensus | 603 | 99.93 | ||
| KOG0645|consensus | 312 | 99.93 | ||
| KOG0278|consensus | 334 | 99.93 | ||
| KOG0292|consensus | 1202 | 99.93 | ||
| KOG0305|consensus | 484 | 99.93 | ||
| KOG0293|consensus | 519 | 99.93 | ||
| KOG0269|consensus | 839 | 99.92 | ||
| PTZ00421 | 493 | coronin; Provisional | 99.92 | |
| KOG0302|consensus | 440 | 99.92 | ||
| KOG0306|consensus | 888 | 99.92 | ||
| KOG0266|consensus | 456 | 99.92 | ||
| KOG0295|consensus | 406 | 99.92 | ||
| KOG0973|consensus | 942 | 99.91 | ||
| KOG0641|consensus | 350 | 99.91 | ||
| KOG0283|consensus | 712 | 99.91 | ||
| KOG0282|consensus | 503 | 99.91 | ||
| KOG0772|consensus | 641 | 99.91 | ||
| PTZ00420 | 568 | coronin; Provisional | 99.91 | |
| KOG0310|consensus | 487 | 99.91 | ||
| cd00200 | 289 | WD40 WD40 domain, found in a number of eukaryotic | 99.9 | |
| KOG0288|consensus | 459 | 99.9 | ||
| KOG0305|consensus | 484 | 99.9 | ||
| KOG0293|consensus | 519 | 99.9 | ||
| KOG0291|consensus | 893 | 99.9 | ||
| KOG0647|consensus | 347 | 99.9 | ||
| KOG0640|consensus | 430 | 99.9 | ||
| KOG0306|consensus | 888 | 99.9 | ||
| KOG0643|consensus | 327 | 99.89 | ||
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.89 | |
| KOG0641|consensus | 350 | 99.89 | ||
| KOG0313|consensus | 423 | 99.89 | ||
| KOG0973|consensus | 942 | 99.89 | ||
| KOG0316|consensus | 307 | 99.89 | ||
| KOG1036|consensus | 323 | 99.89 | ||
| KOG0283|consensus | 712 | 99.88 | ||
| KOG0296|consensus | 399 | 99.88 | ||
| KOG0274|consensus | 537 | 99.88 | ||
| KOG1407|consensus | 313 | 99.88 | ||
| KOG1332|consensus | 299 | 99.88 | ||
| PTZ00420 | 568 | coronin; Provisional | 99.87 | |
| KOG0275|consensus | 508 | 99.87 | ||
| KOG0308|consensus | 735 | 99.87 | ||
| KOG4283|consensus | 397 | 99.86 | ||
| KOG0270|consensus | 463 | 99.86 | ||
| KOG0274|consensus | 537 | 99.86 | ||
| KOG0307|consensus | 1049 | 99.86 | ||
| KOG0302|consensus | 440 | 99.85 | ||
| KOG4378|consensus | 673 | 99.85 | ||
| KOG0289|consensus | 506 | 99.85 | ||
| KOG0308|consensus | 735 | 99.85 | ||
| KOG0646|consensus | 476 | 99.85 | ||
| KOG0772|consensus | 641 | 99.85 | ||
| KOG0310|consensus | 487 | 99.85 | ||
| KOG0299|consensus | 479 | 99.85 | ||
| KOG2445|consensus | 361 | 99.85 | ||
| KOG0267|consensus | 825 | 99.84 | ||
| KOG4283|consensus | 397 | 99.84 | ||
| KOG0269|consensus | 839 | 99.84 | ||
| KOG1332|consensus | 299 | 99.84 | ||
| KOG0289|consensus | 506 | 99.84 | ||
| KOG0301|consensus | 745 | 99.84 | ||
| KOG0300|consensus | 481 | 99.83 | ||
| KOG0643|consensus | 327 | 99.83 | ||
| KOG2096|consensus | 420 | 99.83 | ||
| KOG0640|consensus | 430 | 99.83 | ||
| KOG2919|consensus | 406 | 99.83 | ||
| KOG0268|consensus | 433 | 99.83 | ||
| KOG0301|consensus | 745 | 99.83 | ||
| KOG0290|consensus | 364 | 99.82 | ||
| KOG2445|consensus | 361 | 99.82 | ||
| KOG0294|consensus | 362 | 99.82 | ||
| KOG1407|consensus | 313 | 99.82 | ||
| KOG1408|consensus | 1080 | 99.82 | ||
| PTZ00421 | 493 | coronin; Provisional | 99.82 | |
| KOG0321|consensus | 720 | 99.81 | ||
| KOG1274|consensus | 933 | 99.8 | ||
| KOG0299|consensus | 479 | 99.8 | ||
| KOG0300|consensus | 481 | 99.79 | ||
| KOG1539|consensus | 910 | 99.79 | ||
| KOG0268|consensus | 433 | 99.79 | ||
| KOG0307|consensus | 1049 | 99.79 | ||
| KOG4328|consensus | 498 | 99.78 | ||
| TIGR03866 | 300 | PQQ_ABC_repeats PQQ-dependent catabolism-associate | 99.77 | |
| KOG2048|consensus | 691 | 99.77 | ||
| KOG0288|consensus | 459 | 99.77 | ||
| KOG2106|consensus | 626 | 99.77 | ||
| KOG1007|consensus | 370 | 99.76 | ||
| KOG0639|consensus | 705 | 99.76 | ||
| KOG0647|consensus | 347 | 99.76 | ||
| KOG2055|consensus | 514 | 99.76 | ||
| KOG0303|consensus | 472 | 99.76 | ||
| KOG1273|consensus | 405 | 99.76 | ||
| KOG0267|consensus | 825 | 99.75 | ||
| KOG0294|consensus | 362 | 99.74 | ||
| KOG0278|consensus | 334 | 99.74 | ||
| KOG2096|consensus | 420 | 99.73 | ||
| KOG4328|consensus | 498 | 99.73 | ||
| KOG1034|consensus | 385 | 99.73 | ||
| KOG0270|consensus | 463 | 99.73 | ||
| KOG0321|consensus | 720 | 99.72 | ||
| KOG1408|consensus | 1080 | 99.72 | ||
| KOG0650|consensus | 733 | 99.71 | ||
| KOG1007|consensus | 370 | 99.71 | ||
| KOG0639|consensus | 705 | 99.71 | ||
| KOG1036|consensus | 323 | 99.71 | ||
| KOG0646|consensus | 476 | 99.7 | ||
| KOG1009|consensus | 434 | 99.7 | ||
| KOG1188|consensus | 376 | 99.7 | ||
| KOG0290|consensus | 364 | 99.69 | ||
| KOG1063|consensus | 764 | 99.69 | ||
| KOG1063|consensus | 764 | 99.67 | ||
| KOG4378|consensus | 673 | 99.67 | ||
| KOG0642|consensus | 577 | 99.67 | ||
| KOG1445|consensus | 1012 | 99.67 | ||
| KOG1446|consensus | 311 | 99.66 | ||
| KOG0303|consensus | 472 | 99.66 | ||
| KOG0642|consensus | 577 | 99.66 | ||
| KOG4227|consensus | 609 | 99.64 | ||
| KOG1539|consensus | 910 | 99.62 | ||
| KOG0644|consensus | 1113 | 99.62 | ||
| KOG1009|consensus | 434 | 99.61 | ||
| KOG1188|consensus | 376 | 99.61 | ||
| KOG1587|consensus | 555 | 99.6 | ||
| KOG1445|consensus | 1012 | 99.6 | ||
| KOG1587|consensus | 555 | 99.6 | ||
| KOG2106|consensus | 626 | 99.6 | ||
| KOG2055|consensus | 514 | 99.59 | ||
| KOG1524|consensus | 737 | 99.59 | ||
| KOG2919|consensus | 406 | 99.59 | ||
| KOG2048|consensus | 691 | 99.58 | ||
| KOG0650|consensus | 733 | 99.58 | ||
| TIGR03866 | 300 | PQQ_ABC_repeats PQQ-dependent catabolism-associate | 99.58 | |
| COG2319 | 466 | FOG: WD40 repeat [General function prediction only | 99.57 | |
| KOG1034|consensus | 385 | 99.55 | ||
| KOG0771|consensus | 398 | 99.55 | ||
| KOG1334|consensus | 559 | 99.54 | ||
| KOG1523|consensus | 361 | 99.52 | ||
| KOG1523|consensus | 361 | 99.51 | ||
| KOG1272|consensus | 545 | 99.51 | ||
| KOG1274|consensus | 933 | 99.5 | ||
| KOG1538|consensus | 1081 | 99.5 | ||
| KOG1310|consensus | 758 | 99.5 | ||
| KOG1524|consensus | 737 | 99.49 | ||
| PRK01742 | 429 | tolB translocation protein TolB; Provisional | 99.49 | |
| KOG0322|consensus | 323 | 99.49 | ||
| KOG2394|consensus | 636 | 99.48 | ||
| KOG1273|consensus | 405 | 99.48 | ||
| KOG1240|consensus | 1431 | 99.48 | ||
| KOG1517|consensus | 1387 | 99.45 | ||
| KOG1517|consensus | 1387 | 99.45 | ||
| KOG1310|consensus | 758 | 99.44 | ||
| KOG0649|consensus | 325 | 99.43 | ||
| KOG1538|consensus | 1081 | 99.43 | ||
| KOG0322|consensus | 323 | 99.42 | ||
| KOG2110|consensus | 391 | 99.41 | ||
| KOG2394|consensus | 636 | 99.41 | ||
| KOG4227|consensus | 609 | 99.4 | ||
| KOG0649|consensus | 325 | 99.38 | ||
| KOG0309|consensus | 1081 | 99.36 | ||
| PRK11028 | 330 | 6-phosphogluconolactonase; Provisional | 99.34 | |
| PF12265 | 74 | CAF1C_H4-bd: Histone-binding protein RBBP4 or subu | 99.32 | |
| KOG2110|consensus | 391 | 99.3 | ||
| PRK03629 | 429 | tolB translocation protein TolB; Provisional | 99.28 | |
| COG2319 | 466 | FOG: WD40 repeat [General function prediction only | 99.26 | |
| KOG2139|consensus | 445 | 99.25 | ||
| KOG3881|consensus | 412 | 99.23 | ||
| KOG0771|consensus | 398 | 99.22 | ||
| PF08662 | 194 | eIF2A: Eukaryotic translation initiation factor eI | 99.2 | |
| KOG1963|consensus | 792 | 99.19 | ||
| PRK04922 | 433 | tolB translocation protein TolB; Provisional | 99.18 | |
| PF08662 | 194 | eIF2A: Eukaryotic translation initiation factor eI | 99.16 | |
| KOG2111|consensus | 346 | 99.15 | ||
| KOG1409|consensus | 404 | 99.14 | ||
| PRK02889 | 427 | tolB translocation protein TolB; Provisional | 99.13 | |
| KOG2321|consensus | 703 | 99.12 | ||
| KOG0644|consensus | 1113 | 99.12 | ||
| PRK05137 | 435 | tolB translocation protein TolB; Provisional | 99.12 | |
| KOG2111|consensus | 346 | 99.11 | ||
| KOG0280|consensus | 339 | 99.1 | ||
| KOG4497|consensus | 447 | 99.1 | ||
| PRK05137 | 435 | tolB translocation protein TolB; Provisional | 99.07 | |
| KOG2139|consensus | 445 | 99.06 | ||
| PRK01742 | 429 | tolB translocation protein TolB; Provisional | 99.05 | |
| KOG1272|consensus | 545 | 99.01 | ||
| KOG1963|consensus | 792 | 98.99 | ||
| KOG0974|consensus | 967 | 98.99 | ||
| PRK03629 | 429 | tolB translocation protein TolB; Provisional | 98.98 | |
| PRK11028 | 330 | 6-phosphogluconolactonase; Provisional | 98.97 | |
| PRK04792 | 448 | tolB translocation protein TolB; Provisional | 98.95 | |
| PRK00178 | 430 | tolB translocation protein TolB; Provisional | 98.92 | |
| PRK04922 | 433 | tolB translocation protein TolB; Provisional | 98.91 | |
| PRK02889 | 427 | tolB translocation protein TolB; Provisional | 98.88 | |
| TIGR02800 | 417 | propeller_TolB tol-pal system beta propeller repea | 98.86 | |
| KOG1334|consensus | 559 | 98.85 | ||
| KOG4714|consensus | 319 | 98.84 | ||
| KOG1240|consensus | 1431 | 98.83 | ||
| KOG1064|consensus | 2439 | 98.83 | ||
| KOG0280|consensus | 339 | 98.82 | ||
| PRK01029 | 428 | tolB translocation protein TolB; Provisional | 98.81 | |
| KOG0974|consensus | 967 | 98.79 | ||
| PF00400 | 39 | WD40: WD domain, G-beta repeat; InterPro: IPR01978 | 98.75 | |
| TIGR02800 | 417 | propeller_TolB tol-pal system beta propeller repea | 98.75 | |
| PF00400 | 39 | WD40: WD domain, G-beta repeat; InterPro: IPR01978 | 98.75 | |
| KOG1064|consensus | 2439 | 98.74 | ||
| KOG4547|consensus | 541 | 98.71 | ||
| KOG1354|consensus | 433 | 98.69 | ||
| KOG4547|consensus | 541 | 98.67 | ||
| KOG3914|consensus | 390 | 98.63 | ||
| KOG0309|consensus | 1081 | 98.63 | ||
| KOG2315|consensus | 566 | 98.61 | ||
| PF02239 | 369 | Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO | 98.58 | |
| KOG2321|consensus | 703 | 98.58 | ||
| KOG3881|consensus | 412 | 98.57 | ||
| PRK04792 | 448 | tolB translocation protein TolB; Provisional | 98.55 | |
| PF04762 | 928 | IKI3: IKI3 family; InterPro: IPR006849 Members of | 98.52 | |
| KOG2695|consensus | 425 | 98.52 | ||
| KOG4190|consensus | 1034 | 98.51 | ||
| PRK01029 | 428 | tolB translocation protein TolB; Provisional | 98.5 | |
| PRK00178 | 430 | tolB translocation protein TolB; Provisional | 98.5 | |
| PF15492 | 282 | Nbas_N: Neuroblastoma-amplified sequence, N termin | 98.49 | |
| KOG4532|consensus | 344 | 98.48 | ||
| KOG3914|consensus | 390 | 98.44 | ||
| KOG1354|consensus | 433 | 98.43 | ||
| KOG2041|consensus | 1189 | 98.42 | ||
| KOG1409|consensus | 404 | 98.41 | ||
| KOG4532|consensus | 344 | 98.4 | ||
| KOG4497|consensus | 447 | 98.33 | ||
| PF11768 | 545 | DUF3312: Protein of unknown function (DUF3312); In | 98.29 | |
| COG2706 | 346 | 3-carboxymuconate cyclase [Carbohydrate transport | 98.27 | |
| COG5170 | 460 | CDC55 Serine/threonine protein phosphatase 2A, reg | 98.25 | |
| PRK04043 | 419 | tolB translocation protein TolB; Provisional | 98.22 | |
| COG4946 | 668 | Uncharacterized protein related to the periplasmic | 98.18 | |
| COG5354 | 561 | Uncharacterized protein, contains Trp-Asp (WD) rep | 98.15 | |
| KOG1645|consensus | 463 | 98.14 | ||
| PF10282 | 345 | Lactonase: Lactonase, 7-bladed beta-propeller; Int | 98.09 | |
| PF02239 | 369 | Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO | 98.07 | |
| KOG0882|consensus | 558 | 98.06 | ||
| KOG4714|consensus | 319 | 98.03 | ||
| KOG1275|consensus | 1118 | 98.01 | ||
| KOG1008|consensus | 783 | 97.92 | ||
| PRK04043 | 419 | tolB translocation protein TolB; Provisional | 97.87 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 97.81 | |
| KOG2315|consensus | 566 | 97.8 | ||
| PF11768 | 545 | DUF3312: Protein of unknown function (DUF3312); In | 97.78 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 97.78 | |
| COG5170 | 460 | CDC55 Serine/threonine protein phosphatase 2A, reg | 97.78 | |
| KOG3617|consensus | 1416 | 97.76 | ||
| PF04762 | 928 | IKI3: IKI3 family; InterPro: IPR006849 Members of | 97.76 | |
| KOG2041|consensus | 1189 | 97.7 | ||
| PF15492 | 282 | Nbas_N: Neuroblastoma-amplified sequence, N termin | 97.68 | |
| KOG1832|consensus | 1516 | 97.66 | ||
| KOG2695|consensus | 425 | 97.62 | ||
| KOG4190|consensus | 1034 | 97.62 | ||
| smart00320 | 40 | WD40 WD40 repeats. Note that these repeats are per | 97.61 | |
| smart00320 | 40 | WD40 WD40 repeats. Note that these repeats are per | 97.59 | |
| KOG0882|consensus | 558 | 97.59 | ||
| KOG2066|consensus | 846 | 97.58 | ||
| TIGR02658 | 352 | TTQ_MADH_Hv methylamine dehydrogenase heavy chain. | 97.53 | |
| PF10282 | 345 | Lactonase: Lactonase, 7-bladed beta-propeller; Int | 97.49 | |
| KOG1920|consensus | 1265 | 97.46 | ||
| KOG1008|consensus | 783 | 97.45 | ||
| PF08450 | 246 | SGL: SMP-30/Gluconolaconase/LRE-like region; Inter | 97.43 | |
| KOG1912|consensus | 1062 | 97.34 | ||
| KOG1912|consensus | 1062 | 97.34 | ||
| KOG2066|consensus | 846 | 97.25 | ||
| KOG2114|consensus | 933 | 97.15 | ||
| COG5354 | 561 | Uncharacterized protein, contains Trp-Asp (WD) rep | 97.12 | |
| KOG4640|consensus | 665 | 97.11 | ||
| KOG2114|consensus | 933 | 97.1 | ||
| KOG2314|consensus | 698 | 97.06 | ||
| TIGR02658 | 352 | TTQ_MADH_Hv methylamine dehydrogenase heavy chain. | 97.04 | |
| COG2706 | 346 | 3-carboxymuconate cyclase [Carbohydrate transport | 96.98 | |
| PF08450 | 246 | SGL: SMP-30/Gluconolaconase/LRE-like region; Inter | 96.83 | |
| PF12894 | 47 | Apc4_WD40: Anaphase-promoting complex subunit 4 WD | 96.76 | |
| KOG1645|consensus | 463 | 96.74 | ||
| COG4946 | 668 | Uncharacterized protein related to the periplasmic | 96.7 | |
| TIGR03300 | 377 | assembly_YfgL outer membrane assembly lipoprotein | 96.61 | |
| KOG3617|consensus | 1416 | 96.56 | ||
| PF14783 | 111 | BBS2_Mid: Ciliary BBSome complex subunit 2, middle | 96.56 | |
| PF12894 | 47 | Apc4_WD40: Anaphase-promoting complex subunit 4 WD | 96.34 | |
| KOG2314|consensus | 698 | 96.26 | ||
| KOG1920|consensus | 1265 | 96.18 | ||
| KOG1275|consensus | 1118 | 96.14 | ||
| PF08553 | 794 | VID27: VID27 cytoplasmic protein; InterPro: IPR013 | 96.13 | |
| KOG2079|consensus | 1206 | 96.11 | ||
| KOG3621|consensus | 726 | 96.09 | ||
| PF08596 | 395 | Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; | 95.83 | |
| KOG4640|consensus | 665 | 95.71 | ||
| PF04841 | 410 | Vps16_N: Vps16, N-terminal region; InterPro: IPR00 | 95.61 | |
| PF13360 | 238 | PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A | 95.52 | |
| PF06977 | 248 | SdiA-regulated: SdiA-regulated; InterPro: IPR00972 | 95.45 | |
| KOG3621|consensus | 726 | 95.37 | ||
| PF10313 | 43 | DUF2415: Uncharacterised protein domain (DUF2415); | 95.06 | |
| PF04053 | 443 | Coatomer_WDAD: Coatomer WD associated region ; Int | 94.95 | |
| KOG1832|consensus | 1516 | 94.68 | ||
| PRK02888 | 635 | nitrous-oxide reductase; Validated | 94.65 | |
| PF13360 | 238 | PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A | 94.51 | |
| PF07433 | 305 | DUF1513: Protein of unknown function (DUF1513); In | 94.48 | |
| PF10313 | 43 | DUF2415: Uncharacterised protein domain (DUF2415); | 94.42 | |
| TIGR03300 | 377 | assembly_YfgL outer membrane assembly lipoprotein | 94.36 | |
| COG0823 | 425 | TolB Periplasmic component of the Tol biopolymer t | 94.16 | |
| PF06977 | 248 | SdiA-regulated: SdiA-regulated; InterPro: IPR00972 | 93.93 | |
| PF08596 | 395 | Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; | 93.83 | |
| COG0823 | 425 | TolB Periplasmic component of the Tol biopolymer t | 93.66 | |
| PF00930 | 353 | DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin | 93.28 | |
| KOG2079|consensus | 1206 | 92.16 | ||
| KOG2444|consensus | 238 | 91.75 | ||
| PF04053 | 443 | Coatomer_WDAD: Coatomer WD associated region ; Int | 91.52 | |
| PF14783 | 111 | BBS2_Mid: Ciliary BBSome complex subunit 2, middle | 91.22 | |
| KOG2444|consensus | 238 | 90.92 | ||
| KOG2395|consensus | 644 | 90.74 | ||
| PRK02888 | 635 | nitrous-oxide reductase; Validated | 90.35 | |
| PF10168 | 717 | Nup88: Nuclear pore component; InterPro: IPR019321 | 90.2 | |
| PRK11138 | 394 | outer membrane biogenesis protein BamB; Provisiona | 89.88 | |
| PF00930 | 353 | DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin | 88.87 | |
| PF00780 | 275 | CNH: CNH domain; InterPro: IPR001180 Based on sequ | 88.65 | |
| PF15390 | 671 | DUF4613: Domain of unknown function (DUF4613) | 88.49 | |
| PF08553 | 794 | VID27: VID27 cytoplasmic protein; InterPro: IPR013 | 88.12 | |
| KOG4649|consensus | 354 | 87.85 | ||
| PF07569 | 219 | Hira: TUP1-like enhancer of split; InterPro: IPR01 | 87.25 | |
| PF03178 | 321 | CPSF_A: CPSF A subunit region; InterPro: IPR004871 | 86.97 | |
| PF07433 | 305 | DUF1513: Protein of unknown function (DUF1513); In | 85.82 | |
| PRK13616 | 591 | lipoprotein LpqB; Provisional | 85.29 | |
| KOG4499|consensus | 310 | 85.09 | ||
| COG3386 | 307 | Gluconolactonase [Carbohydrate transport and metab | 84.91 | |
| COG3391 | 381 | Uncharacterized conserved protein [Function unknow | 84.76 | |
| KOG4460|consensus | 741 | 84.7 | ||
| PRK11138 | 394 | outer membrane biogenesis protein BamB; Provisiona | 84.61 | |
| PF04841 | 410 | Vps16_N: Vps16, N-terminal region; InterPro: IPR00 | 84.54 | |
| PF12234 | 631 | Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0 | 84.48 | |
| KOG3630|consensus | 1405 | 84.19 | ||
| PF14655 | 415 | RAB3GAP2_N: Rab3 GTPase-activating protein regulat | 83.98 | |
| PF10168 | 717 | Nup88: Nuclear pore component; InterPro: IPR019321 | 83.38 | |
| PF06433 | 342 | Me-amine-dh_H: Methylamine dehydrogenase heavy cha | 83.01 | |
| KOG2395|consensus | 644 | 82.76 | ||
| PF14583 | 386 | Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C | 80.79 | |
| PF05096 | 264 | Glu_cyclase_2: Glutamine cyclotransferase; InterPr | 80.72 | |
| KOG4441|consensus | 571 | 80.44 | ||
| COG3204 | 316 | Uncharacterized protein conserved in bacteria [Fun | 80.43 |
| >KOG0264|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-46 Score=317.62 Aligned_cols=317 Identities=40% Similarity=0.621 Sum_probs=254.8
Q ss_pred cCccchHHHHhhhhhhhhhhhhcCcchheeecccccccCceeeEecCCcccccCCCCccccccCcceeeeccccCC-CCC
Q psy4579 4 KKPFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSD-EQN 82 (368)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 82 (368)
.+.+++.++.+.++++||+||+|+|+|||.+++++++||+++|||.||.++- .++.+ -..++..|+|+.+ +++
T Consensus 4 ~~~~~~~~~~~~i~Eey~~WKkNtp~LYDlv~th~LeWPSLt~qWlPd~~~~----~~~~~--~~~rliLGthTs~~~~n 77 (422)
T KOG0264|consen 4 EEAMDEALEQRQINEEYKIWKKNTPFLYDLVITHALEWPSLTVQWLPDVTKP----EEKDF--SKQRLILGTHTSGSEQN 77 (422)
T ss_pred HhhccchhccccccchhhHHhhcCcHHHHHhhhccccccceEEEEcCCcccc----cCCCc--eeEEEEEEeecCCCCcc
Confidence 4567788888899999999999999999999999999999999999997654 22222 3457889999999 999
Q ss_pred cEEEEEEecCCCccccccCCcccCCCCcccCCCCCee-eeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCC
Q psy4579 83 HLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQ-FDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINAT 161 (368)
Q Consensus 83 ~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~-~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~ 161 (368)
+++|+++.+|..+..+....++....+.=-.....++ .+...+.|.+.|+.+++.|+.+.++|+++..+.|.|||..+.
T Consensus 78 ~L~iA~v~lp~~~~~~~~~~~~~e~~e~~g~~~~~~~v~i~~~i~h~gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~ 157 (422)
T KOG0264|consen 78 YLVIASVQLPTDDAQFEDKHYDEERGEFGGFGAVSGKVEISQKINHDGEVNRARYMPQNPNIVATKTSSGDVYVFDYTKH 157 (422)
T ss_pred EEEEEeecCCCcccccccccccccccccCCccccccceEEEEeccCCccchhhhhCCCCCcEEEecCCCCCEEEEEeccC
Confidence 9999999999988877777766543210001112222 234557799999999999999999999999999999999875
Q ss_pred CCCCc---ccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEE
Q psy4579 162 PKENR---VIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYS 238 (368)
Q Consensus 162 ~~~~~---~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~ 238 (368)
....+ ...+...+.||+..- ++++|++.....|++|+.|++|++||+.......+...+...+.+|...|+.++
T Consensus 158 ~s~~~~~~~~~Pdl~L~gH~~eg---~glsWn~~~~g~Lls~~~d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~ 234 (422)
T KOG0264|consen 158 PSKPKASGECRPDLRLKGHEKEG---YGLSWNRQQEGTLLSGSDDHTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVA 234 (422)
T ss_pred CCcccccccCCCceEEEeecccc---cccccccccceeEeeccCCCcEEEEeccccccCCccccceEEeecCCcceehhh
Confidence 43322 234566899999864 699999998889999999999999999988776677788899999999999999
Q ss_pred Eee---ecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcE
Q psy4579 239 IHR---LILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCV 315 (368)
Q Consensus 239 ~~~---~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~ 315 (368)
|++ .++++.+.|+...+|..+.. +.+... ...+|.++|+|++|+|.+.++
T Consensus 235 ~h~~h~~lF~sv~dd~~L~iwD~R~~--------------------------~~~~~~-~~~ah~~~vn~~~fnp~~~~i 287 (422)
T KOG0264|consen 235 WHPLHEDLFGSVGDDGKLMIWDTRSN--------------------------TSKPSH-SVKAHSAEVNCVAFNPFNEFI 287 (422)
T ss_pred ccccchhhheeecCCCeEEEEEcCCC--------------------------CCCCcc-cccccCCceeEEEeCCCCCce
Confidence 986 57888877766666544310 111112 223899999999999999999
Q ss_pred EEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeecccCceeeecceeee
Q psy4579 316 IATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 316 lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p~~ 365 (368)
|||||.|++|++||+|+. ..++..+.+|.+.|..|.|+|+.
T Consensus 288 lAT~S~D~tV~LwDlRnL---------~~~lh~~e~H~dev~~V~WSPh~ 328 (422)
T KOG0264|consen 288 LATGSADKTVALWDLRNL---------NKPLHTFEGHEDEVFQVEWSPHN 328 (422)
T ss_pred EEeccCCCcEEEeechhc---------ccCceeccCCCcceEEEEeCCCC
Confidence 999999999999999974 45778899999999999999986
|
|
| >KOG0271|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-41 Score=280.23 Aligned_cols=287 Identities=20% Similarity=0.277 Sum_probs=239.3
Q ss_pred cccCceeeEecCCcccccCCCCccccccCcceeeeccccCCCCCcEEEEEEecCCCccccccCCcccCCCCcccCCCCC-
Q psy4579 39 LEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNED- 117 (368)
Q Consensus 39 ~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~- 117 (368)
+..||+|++|+|+|.+|++|+.|.++++|+.++.+..++.... ..++.++.|.++...+ +++ +.||+|++||.+
T Consensus 114 H~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~TeTp~~t~KgH-~~WVlcvawsPDgk~i-ASG---~~dg~I~lwdpkt 188 (480)
T KOG0271|consen 114 HGEAVLSVQFSPTGSRLVTGSGDTTVRLWDLDTETPLFTCKGH-KNWVLCVAWSPDGKKI-ASG---SKDGSIRLWDPKT 188 (480)
T ss_pred CCCcEEEEEecCCCceEEecCCCceEEeeccCCCCcceeecCC-ccEEEEEEECCCcchh-hcc---ccCCeEEEecCCC
Confidence 5789999999999999999999999988887777666655543 3578889997766544 444 479999999965
Q ss_pred -eeeeeccccCCCCceeeEecC-----CCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeC
Q psy4579 118 -AQFDASNYDTDKGGYGLSWNP-----SLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNP 191 (368)
Q Consensus 118 -~~~~~~~~~h~~~v~~l~~sp-----~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p 191 (368)
++.-..+.+|.+.|++|+|.| .. ++||+++.||+|+|||+..+. ++..+.||+.+|+ |+.|--
T Consensus 189 g~~~g~~l~gH~K~It~Lawep~hl~p~~-r~las~skDg~vrIWd~~~~~-------~~~~lsgHT~~VT---CvrwGG 257 (480)
T KOG0271|consen 189 GQQIGRALRGHKKWITALAWEPLHLVPPC-RRLASSSKDGSVRIWDTKLGT-------CVRTLSGHTASVT---CVRWGG 257 (480)
T ss_pred CCcccccccCcccceeEEeecccccCCCc-cceecccCCCCEEEEEccCce-------EEEEeccCccceE---EEEEcC
Confidence 456678899999999999987 33 689999999999999998764 5788999999997 999964
Q ss_pred CCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee-------------e----------------
Q psy4579 192 SLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR-------------L---------------- 242 (368)
Q Consensus 192 ~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~-------------~---------------- 242 (368)
..+++|||.|++|++|+...+ .+.+.+++|...|+.++.+. .
T Consensus 258 --~gliySgS~DrtIkvw~a~dG-------~~~r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY 328 (480)
T KOG0271|consen 258 --EGLIYSGSQDRTIKVWRALDG-------KLCRELKGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERY 328 (480)
T ss_pred --CceEEecCCCceEEEEEccch-------hHHHhhcccchheeeeeccchhhhhccccccccccCCChHHHHHHHHHHH
Confidence 689999999999999999887 45778999999999999861 1
Q ss_pred ---------cccccCCCCccceE------------------EEEeecCCcccccccccccCCCCCcccccCCCCceeeee
Q psy4579 243 ---------ILGTHTSDEQNHLL------------------IASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEI 295 (368)
Q Consensus 243 ---------~~~~~~~d~~~~~~------------------~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 295 (368)
.+.++++|.+..+| +-.+.++++.+.+....||.. +.+|+..+|+....+
T Consensus 329 ~~~~~~~~erlVSgsDd~tlflW~p~~~kkpi~rmtgHq~lVn~V~fSPd~r~IASaSFDkS---VkLW~g~tGk~lasf 405 (480)
T KOG0271|consen 329 EAVLKDSGERLVSGSDDFTLFLWNPFKSKKPITRMTGHQALVNHVSFSPDGRYIASASFDKS---VKLWDGRTGKFLASF 405 (480)
T ss_pred HHhhccCcceeEEecCCceEEEecccccccchhhhhchhhheeeEEECCCccEEEEeecccc---eeeeeCCCcchhhhh
Confidence 26677777777776 344567777777777777755 889999999999999
Q ss_pred ecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeecccCceeeecceeee
Q psy4579 296 KINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 296 ~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p~~ 365 (368)
+ +|-++|..++|+.|. +||++||.|.++++||+++ .....-|.||.++|++++|+|..
T Consensus 406 R-GHv~~VYqvawsaDs-RLlVS~SkDsTLKvw~V~t----------kKl~~DLpGh~DEVf~vDwspDG 463 (480)
T KOG0271|consen 406 R-GHVAAVYQVAWSADS-RLLVSGSKDSTLKVWDVRT----------KKLKQDLPGHADEVFAVDWSPDG 463 (480)
T ss_pred h-hccceeEEEEeccCc-cEEEEcCCCceEEEEEeee----------eeecccCCCCCceEEEEEecCCC
Confidence 8 999999999999999 8999999999999999986 23333577999999999999974
|
|
| >KOG0272|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-37 Score=261.02 Aligned_cols=263 Identities=16% Similarity=0.170 Sum_probs=218.9
Q ss_pred ccCceeeEecCCcccccCCCCccccccCcceeeeccccCCCCC-cEEEEEEecCCCc-cccccCCcccCCCCcccCCCCC
Q psy4579 40 EWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQN-HLLIASVQLPNED-AQFDASNYDTDKGGNVQLPNED 117 (368)
Q Consensus 40 ~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~-~~~~~~~~~~~~~g~i~i~~~~ 117 (368)
+-|+..+.|++|+..+++||-+|.+.+|. ...+........ ...+..+.|.+.. ..-.++. +.||++++|+.+
T Consensus 175 ~rPis~~~fS~ds~~laT~swsG~~kvW~--~~~~~~~~~l~gH~~~v~~~~fhP~~~~~~lat~---s~Dgtvklw~~~ 249 (459)
T KOG0272|consen 175 TRPISGCSFSRDSKHLATGSWSGLVKVWS--VPQCNLLQTLRGHTSRVGAAVFHPVDSDLNLATA---SADGTVKLWKLS 249 (459)
T ss_pred CCcceeeEeecCCCeEEEeecCCceeEee--cCCcceeEEEeccccceeeEEEccCCCccceeee---ccCCceeeeccC
Confidence 57999999999999999999999996664 333333333323 3457777785542 3222222 569999999998
Q ss_pred e-eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCe
Q psy4579 118 A-QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGY 196 (368)
Q Consensus 118 ~-~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~ 196 (368)
+ ..+..+.+|...|..++|+|+| ++|+|++.|.+-++||++++. ......||...| ++|+|+|+ +.+
T Consensus 250 ~e~~l~~l~gH~~RVs~VafHPsG-~~L~TasfD~tWRlWD~~tk~-------ElL~QEGHs~~v---~~iaf~~D-GSL 317 (459)
T KOG0272|consen 250 QETPLQDLEGHLARVSRVAFHPSG-KFLGTASFDSTWRLWDLETKS-------ELLLQEGHSKGV---FSIAFQPD-GSL 317 (459)
T ss_pred CCcchhhhhcchhhheeeeecCCC-ceeeecccccchhhcccccch-------hhHhhccccccc---ceeEecCC-Cce
Confidence 8 5566788899999999999999 999999999999999999875 356678999999 59999999 999
Q ss_pred EEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee--ecccccCCCCccceEEEEeecCCcccccccccc
Q psy4579 197 LLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LILGTHTSDEQNHLLIASVQLPNEDAQFDASNY 274 (368)
Q Consensus 197 l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 274 (368)
++|||.|..-+|||+|++ +++..+.+|...|.+|+|+| ..++++++|.+.++|....
T Consensus 318 ~~tGGlD~~~RvWDlRtg-------r~im~L~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~-------------- 376 (459)
T KOG0272|consen 318 AATGGLDSLGRVWDLRTG-------RCIMFLAGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRM-------------- 376 (459)
T ss_pred eeccCccchhheeecccC-------cEEEEecccccceeeEeECCCceEEeecCCCCcEEEeeecc--------------
Confidence 999999999999999999 67889999999999999987 6889999998888887653
Q ss_pred cCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeecccC
Q psy4579 275 DTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQK 354 (368)
Q Consensus 275 d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~ 354 (368)
.+....+. +|..-|+.|.|+|...++|+|+|.|++++||.-+. +.++..+.||.+
T Consensus 377 --------------r~~ly~ip-AH~nlVS~Vk~~p~~g~fL~TasyD~t~kiWs~~~----------~~~~ksLaGHe~ 431 (459)
T KOG0272|consen 377 --------------RSELYTIP-AHSNLVSQVKYSPQEGYFLVTASYDNTVKIWSTRT----------WSPLKSLAGHEG 431 (459)
T ss_pred --------------cccceecc-cccchhhheEecccCCeEEEEcccCcceeeecCCC----------cccchhhcCCcc
Confidence 22234444 99999999999996558999999999999999876 788889999999
Q ss_pred ceeeecceeee
Q psy4579 355 EGLIEGTYNCY 365 (368)
Q Consensus 355 ~V~~l~w~p~~ 365 (368)
.|.+++-+|+.
T Consensus 432 kV~s~Dis~d~ 442 (459)
T KOG0272|consen 432 KVISLDISPDS 442 (459)
T ss_pred ceEEEEeccCC
Confidence 99999998874
|
|
| >KOG0284|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-37 Score=256.57 Aligned_cols=272 Identities=18% Similarity=0.248 Sum_probs=216.2
Q ss_pred chheeecccccccCceeeEecCCcccccCCCCccccccCcceeeeccccCCCCCcE-EEEEEecCCCccccccCCcccCC
Q psy4579 29 FLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQNHL-LIASVQLPNEDAQFDASNYDTDK 107 (368)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~ 107 (368)
..|-+...++++.||..|.|+|+|++|++|++.|.+.+|+- ..-.+..-.|.+. .|.++.+.+++.-.. ++ ++
T Consensus 85 tKf~h~s~NKvkc~V~~v~WtPeGRRLltgs~SGEFtLWNg--~~fnFEtilQaHDs~Vr~m~ws~~g~wmi-Sg---D~ 158 (464)
T KOG0284|consen 85 TKFVHTSSNKVKCPVNVVRWTPEGRRLLTGSQSGEFTLWNG--TSFNFETILQAHDSPVRTMKWSHNGTWMI-SG---DK 158 (464)
T ss_pred cceEeccccccccceeeEEEcCCCceeEeecccccEEEecC--ceeeHHHHhhhhcccceeEEEccCCCEEE-Ec---CC
Confidence 35666777889999999999999999999999999988863 1111111245444 588888876554333 33 57
Q ss_pred CCcccCCCCCeeeeeccccCC-CCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceeccee
Q psy4579 108 GGNVQLPNEDAQFDASNYDTD-KGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYG 186 (368)
Q Consensus 108 ~g~i~i~~~~~~~~~~~~~h~-~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 186 (368)
+|.|++|+.+-+.+...+.|. ..|++++|+|.. ..+++|+.||+|+|||....+ +...+.||.-.|+ +
T Consensus 159 gG~iKyWqpnmnnVk~~~ahh~eaIRdlafSpnD-skF~t~SdDg~ikiWdf~~~k-------ee~vL~GHgwdVk---s 227 (464)
T KOG0284|consen 159 GGMIKYWQPNMNNVKIIQAHHAEAIRDLAFSPND-SKFLTCSDDGTIKIWDFRMPK-------EERVLRGHGWDVK---S 227 (464)
T ss_pred CceEEecccchhhhHHhhHhhhhhhheeccCCCC-ceeEEecCCCeEEEEeccCCc-------hhheeccCCCCcc---e
Confidence 999999999887777777665 899999999987 899999999999999998765 4578899999997 9
Q ss_pred eEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee--ecccccCCCCccceEEEEeecCC
Q psy4579 187 LSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LILGTHTSDEQNHLLIASVQLPN 264 (368)
Q Consensus 187 i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~d~~~~~~~~~~~~~~ 264 (368)
++|+|. ..++++||.|..|++||.+++ .++.++.+|...|..+.|++ ..+.+++.|..++++
T Consensus 228 vdWHP~-kgLiasgskDnlVKlWDprSg-------~cl~tlh~HKntVl~~~f~~n~N~Llt~skD~~~kv~-------- 291 (464)
T KOG0284|consen 228 VDWHPT-KGLIASGSKDNLVKLWDPRSG-------SCLATLHGHKNTVLAVKFNPNGNWLLTGSKDQSCKVF-------- 291 (464)
T ss_pred eccCCc-cceeEEccCCceeEeecCCCc-------chhhhhhhccceEEEEEEcCCCCeeEEccCCceEEEE--------
Confidence 999999 999999999999999999998 67889999999999999986 455555555443333
Q ss_pred cccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCC
Q psy4579 265 EDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECH 344 (368)
Q Consensus 265 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~ 344 (368)
|.++.+....++ +|...|+++.|+|-.+.+|++|+.||.|..|.+.. ..
T Consensus 292 --------------------DiR~mkEl~~~r-~Hkkdv~~~~WhP~~~~lftsgg~Dgsvvh~~v~~----------~~ 340 (464)
T KOG0284|consen 292 --------------------DIRTMKELFTYR-GHKKDVTSLTWHPLNESLFTSGGSDGSVVHWVVGL----------EE 340 (464)
T ss_pred --------------------ehhHhHHHHHhh-cchhhheeeccccccccceeeccCCCceEEEeccc----------cc
Confidence 222233334444 89999999999999999999999999999999963 22
Q ss_pred Ccee-eecccCceeeecceee
Q psy4579 345 PDLR-LRGHQKEGLIEGTYNC 364 (368)
Q Consensus 345 ~~~~-~~gh~~~V~~l~w~p~ 364 (368)
|+.. -.+|...|++|+|+|-
T Consensus 341 p~~~i~~AHd~~iwsl~~hPl 361 (464)
T KOG0284|consen 341 PLGEIPPAHDGEIWSLAYHPL 361 (464)
T ss_pred cccCCCcccccceeeeecccc
Confidence 2222 2489999999999984
|
|
| >KOG0286|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-34 Score=229.08 Aligned_cols=261 Identities=18% Similarity=0.226 Sum_probs=211.7
Q ss_pred ccCceeeEecCCcccccCCCCccccccCcceeeeccccCCCCCcEEEEEEecCCCccccccCCcccCCCCcccCCCCCe-
Q psy4579 40 EWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDA- 118 (368)
Q Consensus 40 ~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~- 118 (368)
---|.+++|++|.++++++|.||.+++|+--+....|...++...++++..-|+ ...+.+.+ -|....||++..
T Consensus 55 ~~Ki~~~~ws~Dsr~ivSaSqDGklIvWDs~TtnK~haipl~s~WVMtCA~sPS-g~~VAcGG----LdN~Csiy~ls~~ 129 (343)
T KOG0286|consen 55 LNKIYAMDWSTDSRRIVSASQDGKLIVWDSFTTNKVHAIPLPSSWVMTCAYSPS-GNFVACGG----LDNKCSIYPLSTR 129 (343)
T ss_pred ccceeeeEecCCcCeEEeeccCCeEEEEEcccccceeEEecCceeEEEEEECCC-CCeEEecC----cCceeEEEecccc
Confidence 345899999999999999999999999987666667777776655555544454 44444444 356666776542
Q ss_pred ------eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCC
Q psy4579 119 ------QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPS 192 (368)
Q Consensus 119 ------~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~ 192 (368)
+....+.+|.+.+.|+.|-++ ..|+|++.|.++.+||+++++ ....|.||.+.| ++++++|.
T Consensus 130 d~~g~~~v~r~l~gHtgylScC~f~dD--~~ilT~SGD~TCalWDie~g~-------~~~~f~GH~gDV---~slsl~p~ 197 (343)
T KOG0286|consen 130 DAEGNVRVSRELAGHTGYLSCCRFLDD--NHILTGSGDMTCALWDIETGQ-------QTQVFHGHTGDV---MSLSLSPS 197 (343)
T ss_pred cccccceeeeeecCccceeEEEEEcCC--CceEecCCCceEEEEEcccce-------EEEEecCCcccE---EEEecCCC
Confidence 334557899999999999996 589999999999999999986 468899999999 69999995
Q ss_pred CCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee--ecccccCCCCccceEEEE-----------
Q psy4579 193 LNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LILGTHTSDEQNHLLIAS----------- 259 (368)
Q Consensus 193 ~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~d~~~~~~~~~----------- 259 (368)
+++.++||+.|+..+|||+|.+ .+...|.+|...|++|.|+| ..+++++.|+..+++..+
T Consensus 198 ~~ntFvSg~cD~~aklWD~R~~-------~c~qtF~ghesDINsv~ffP~G~afatGSDD~tcRlyDlRaD~~~a~ys~~ 270 (343)
T KOG0286|consen 198 DGNTFVSGGCDKSAKLWDVRSG-------QCVQTFEGHESDINSVRFFPSGDAFATGSDDATCRLYDLRADQELAVYSHD 270 (343)
T ss_pred CCCeEEecccccceeeeeccCc-------ceeEeecccccccceEEEccCCCeeeecCCCceeEEEeecCCcEEeeeccC
Confidence 5999999999999999999998 67899999999999999987 688999999999988543
Q ss_pred --------eecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEE
Q psy4579 260 --------VQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFD 329 (368)
Q Consensus 260 --------~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd 329 (368)
+.|+.+++.+... |+ ......||...++....+. +|...|+|+..+|+| ..++|||.|.++|||.
T Consensus 271 ~~~~gitSv~FS~SGRlLfag-y~--d~~c~vWDtlk~e~vg~L~-GHeNRvScl~~s~DG-~av~TgSWDs~lriW~ 343 (343)
T KOG0286|consen 271 SIICGITSVAFSKSGRLLFAG-YD--DFTCNVWDTLKGERVGVLA-GHENRVSCLGVSPDG-MAVATGSWDSTLRIWA 343 (343)
T ss_pred cccCCceeEEEcccccEEEee-ec--CCceeEeeccccceEEEee-ccCCeeEEEEECCCC-cEEEecchhHheeecC
Confidence 3344444444433 32 2347789998888887777 999999999999999 7999999999999994
|
|
| >KOG0271|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-33 Score=230.73 Aligned_cols=289 Identities=18% Similarity=0.260 Sum_probs=223.3
Q ss_pred HHHhhhhhhhhhhhhcCcchheeecccccccCceeeEecCCcccccCCCCccccccCcceeeeccccCC-CCC-cEEEEE
Q psy4579 11 VEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSD-EQN-HLLIAS 88 (368)
Q Consensus 11 ~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~i~~ 88 (368)
....--+.+.++|..++....-++..|.. | |+|++|+|||+.+|+|+.+|.|.+| +...|..... ... ...|..
T Consensus 130 l~tGsGD~TvR~WD~~TeTp~~t~KgH~~-W-VlcvawsPDgk~iASG~~dg~I~lw--dpktg~~~g~~l~gH~K~It~ 205 (480)
T KOG0271|consen 130 LVTGSGDTTVRLWDLDTETPLFTCKGHKN-W-VLCVAWSPDGKKIASGSKDGSIRLW--DPKTGQQIGRALRGHKKWITA 205 (480)
T ss_pred EEecCCCceEEeeccCCCCcceeecCCcc-E-EEEEEECCCcchhhccccCCeEEEe--cCCCCCcccccccCcccceeE
Confidence 34445677889999999888777777644 3 8999999999999999999999555 5566666554 333 346888
Q ss_pred EecCCCc----cccccCCcccCCCCcccCCCCCe-eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCC
Q psy4579 89 VQLPNED----AQFDASNYDTDKGGNVQLPNEDA-QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPK 163 (368)
Q Consensus 89 ~~~~~~~----~~~~~~~~~~~~~g~i~i~~~~~-~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~ 163 (368)
+.|.+-. .+..++. ++||.|+|||... ..+..+.+|+.+|+|++|--+ .+|++|+.|++|++|+...+.
T Consensus 206 Lawep~hl~p~~r~las~---skDg~vrIWd~~~~~~~~~lsgHT~~VTCvrwGG~--gliySgS~DrtIkvw~a~dG~- 279 (480)
T KOG0271|consen 206 LAWEPLHLVPPCRRLASS---SKDGSVRIWDTKLGTCVRTLSGHTASVTCVRWGGE--GLIYSGSQDRTIKVWRALDGK- 279 (480)
T ss_pred EeecccccCCCccceecc---cCCCCEEEEEccCceEEEEeccCccceEEEEEcCC--ceEEecCCCceEEEEEccchh-
Confidence 8883311 1223333 5799999999875 677889999999999999976 599999999999999998874
Q ss_pred CCcccccceeeeccccceecceeeEEe-----------CC------------------------CCCeEEEeeCCCcEEE
Q psy4579 164 ENRVIDAKTIFTGHTAVVEVRYGLSWN-----------PS------------------------LNGYLLSASDDHTICL 208 (368)
Q Consensus 164 ~~~~~~~~~~~~~h~~~v~~~~~i~~~-----------p~------------------------~~~~l~s~s~dg~i~i 208 (368)
+.+.++||...|+ .++.+ |. .+..++|||.|.++.+
T Consensus 280 ------~~r~lkGHahwvN---~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlfl 350 (480)
T KOG0271|consen 280 ------LCRELKGHAHWVN---HLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFL 350 (480)
T ss_pred ------HHHhhcccchhee---eeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcceeEEecCCceEEE
Confidence 5688999988886 66655 32 1235999999999999
Q ss_pred EECCCCCCCCccccceeeeecccccEeEEEEee--ecccccCCCCccceEEEEe-----------------ecCCccccc
Q psy4579 209 WDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LILGTHTSDEQNHLLIASV-----------------QLPNEDAQF 269 (368)
Q Consensus 209 wd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~d~~~~~~~~~~-----------------~~~~~~~~~ 269 (368)
|+..... +|+....+|..-|+.+.|+| .++++++.|+.+++|.... ..+.+.+.+
T Consensus 351 W~p~~~k------kpi~rmtgHq~lVn~V~fSPd~r~IASaSFDkSVkLW~g~tGk~lasfRGHv~~VYqvawsaDsRLl 424 (480)
T KOG0271|consen 351 WNPFKSK------KPITRMTGHQALVNHVSFSPDGRYIASASFDKSVKLWDGRTGKFLASFRGHVAAVYQVAWSADSRLL 424 (480)
T ss_pred ecccccc------cchhhhhchhhheeeEEECCCccEEEEeecccceeeeeCCCcchhhhhhhccceeEEEEeccCccEE
Confidence 9986653 46778889999999999997 6899999999999995432 122222222
Q ss_pred ccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEE
Q psy4579 270 DASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFD 329 (368)
Q Consensus 270 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd 329 (368)
... .....+..|+.++.++...+. +|.+.|.++.|+|+| ..+++|+.|..+++|.
T Consensus 425 VS~---SkDsTLKvw~V~tkKl~~DLp-Gh~DEVf~vDwspDG-~rV~sggkdkv~~lw~ 479 (480)
T KOG0271|consen 425 VSG---SKDSTLKVWDVRTKKLKQDLP-GHADEVFAVDWSPDG-QRVASGGKDKVLRLWR 479 (480)
T ss_pred EEc---CCCceEEEEEeeeeeecccCC-CCCceEEEEEecCCC-ceeecCCCceEEEeec
Confidence 221 223457788888888877776 999999999999999 6888999999999995
|
|
| >KOG0272|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-33 Score=234.13 Aligned_cols=218 Identities=18% Similarity=0.221 Sum_probs=182.9
Q ss_pred EEEEEEecCCCccccccCCcccCCCCcccCCCCCe-eeeeccccCCCCceeeEecCC-CCCeeEEEeCCCcEEEEeCCCC
Q psy4579 84 LLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDA-QFDASNYDTDKGGYGLSWNPS-LNGYLLSASDDHTICLWDINAT 161 (368)
Q Consensus 84 ~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~-~~~~~~~~h~~~v~~l~~sp~-~~~~lasg~~dg~v~iwd~~~~ 161 (368)
-.|+.+.++.++..+....| +|.+++|+.+. +.+.++.+|...|.++.|+|. ....||||+.||++++|++++.
T Consensus 176 rPis~~~fS~ds~~laT~sw----sG~~kvW~~~~~~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~e 251 (459)
T KOG0272|consen 176 RPISGCSFSRDSKHLATGSW----SGLVKVWSVPQCNLLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKLSQE 251 (459)
T ss_pred CcceeeEeecCCCeEEEeec----CCceeEeecCCcceeEEEeccccceeeEEEccCCCccceeeeccCCceeeeccCCC
Confidence 44666677666666665554 58999999764 677889999999999999998 3479999999999999999875
Q ss_pred CCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee
Q psy4579 162 PKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR 241 (368)
Q Consensus 162 ~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~ 241 (368)
. ++..+.+|...|. .++|+|+ +.+|+|++.|.+-++||++++. .+....||...|.+++|++
T Consensus 252 ~-------~l~~l~gH~~RVs---~VafHPs-G~~L~TasfD~tWRlWD~~tk~-------ElL~QEGHs~~v~~iaf~~ 313 (459)
T KOG0272|consen 252 T-------PLQDLEGHLARVS---RVAFHPS-GKFLGTASFDSTWRLWDLETKS-------ELLLQEGHSKGVFSIAFQP 313 (459)
T ss_pred c-------chhhhhcchhhhe---eeeecCC-Cceeeecccccchhhcccccch-------hhHhhcccccccceeEecC
Confidence 3 7889999999996 9999999 9999999999999999999984 3456789999999999986
Q ss_pred --ecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEe
Q psy4579 242 --LILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATK 319 (368)
Q Consensus 242 --~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasg 319 (368)
.++++++-|... .+||+++|+.+..+. +|..+|.+++|+|+| +.||||
T Consensus 314 DGSL~~tGGlD~~~----------------------------RvWDlRtgr~im~L~-gH~k~I~~V~fsPNG-y~lATg 363 (459)
T KOG0272|consen 314 DGSLAATGGLDSLG----------------------------RVWDLRTGRCIMFLA-GHIKEILSVAFSPNG-YHLATG 363 (459)
T ss_pred CCceeeccCccchh----------------------------heeecccCcEEEEec-ccccceeeEeECCCc-eEEeec
Confidence 455555544333 345666788887776 899999999999999 899999
Q ss_pred cCCCeEEEEECCCCCCCCCCCCCCCCceeeecccCceeeeccee
Q psy4579 320 TPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYN 363 (368)
Q Consensus 320 s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p 363 (368)
|.|++++|||+++ ...+.++.+|.+.|..+.|+|
T Consensus 364 s~Dnt~kVWDLR~----------r~~ly~ipAH~nlVS~Vk~~p 397 (459)
T KOG0272|consen 364 SSDNTCKVWDLRM----------RSELYTIPAHSNLVSQVKYSP 397 (459)
T ss_pred CCCCcEEEeeecc----------cccceecccccchhhheEecc
Confidence 9999999999996 344667789999999999998
|
|
| >KOG0263|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-32 Score=246.08 Aligned_cols=253 Identities=21% Similarity=0.310 Sum_probs=199.5
Q ss_pred cccCceeeEecCCcccccCCCCccccccCcceeeeccccCCCCCcEEEEEEecCCCccccccCCcccCCCCcccCCCCCe
Q psy4579 39 LEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDA 118 (368)
Q Consensus 39 ~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~ 118 (368)
..-.+.|+.|++|++.+|.|-.|..+++|.+....-....+... +..+.. .++|-.+.+.|.+.
T Consensus 377 t~~~v~ca~fSddssmlA~Gf~dS~i~~~Sl~p~kl~~lk~~~~---l~~~d~-------------~sad~~~~~~D~~~ 440 (707)
T KOG0263|consen 377 TYQGVTCAEFSDDSSMLACGFVDSSVRVWSLTPKKLKKLKDASD---LSNIDT-------------ESADVDVDMLDDDS 440 (707)
T ss_pred cCCcceeEeecCCcchhhccccccEEEEEecchhhhccccchhh---hccccc-------------cccchhhhhccccC
Confidence 34568899999999999999999999777654321100000000 000000 01122244444443
Q ss_pred -eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeE
Q psy4579 119 -QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYL 197 (368)
Q Consensus 119 -~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l 197 (368)
.....+.+|.++|..++|+|+. ++|+++|.|++||+|.+.+.. ..-.++||..|| +.+.|+|. +.+|
T Consensus 441 ~~~~~~L~GH~GPVyg~sFsPd~-rfLlScSED~svRLWsl~t~s-------~~V~y~GH~~PV---wdV~F~P~-GyYF 508 (707)
T KOG0263|consen 441 SGTSRTLYGHSGPVYGCSFSPDR-RFLLSCSEDSSVRLWSLDTWS-------CLVIYKGHLAPV---WDVQFAPR-GYYF 508 (707)
T ss_pred CceeEEeecCCCceeeeeecccc-cceeeccCCcceeeeecccce-------eEEEecCCCcce---eeEEecCC-ceEE
Confidence 3345589999999999999998 999999999999999999875 567889999999 69999998 9999
Q ss_pred EEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee--ecccccCCCCccceEEEEeecCCccccccccccc
Q psy4579 198 LSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LILGTHTSDEQNHLLIASVQLPNEDAQFDASNYD 275 (368)
Q Consensus 198 ~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d 275 (368)
||+|.|++.++|..... .|.+.+.+|-..|.|+.||| .++++++.|.++++|...
T Consensus 509 atas~D~tArLWs~d~~-------~PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~---------------- 565 (707)
T KOG0263|consen 509 ATASHDQTARLWSTDHN-------KPLRIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVS---------------- 565 (707)
T ss_pred EecCCCceeeeeecccC-------CchhhhcccccccceEEECCcccccccCCCCceEEEEEcC----------------
Confidence 99999999999998775 67899999999999999998 578888888888887554
Q ss_pred CCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeecccCc
Q psy4579 276 TDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKE 355 (368)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~ 355 (368)
+|.....+. ||.++|.+++|+|+| .+||||++||.|++||+.. ..++..+.+|++.
T Consensus 566 ------------~G~~VRiF~-GH~~~V~al~~Sp~G-r~LaSg~ed~~I~iWDl~~----------~~~v~~l~~Ht~t 621 (707)
T KOG0263|consen 566 ------------TGNSVRIFT-GHKGPVTALAFSPCG-RYLASGDEDGLIKIWDLAN----------GSLVKQLKGHTGT 621 (707)
T ss_pred ------------CCcEEEEec-CCCCceEEEEEcCCC-ceEeecccCCcEEEEEcCC----------CcchhhhhcccCc
Confidence 344444444 999999999999999 7999999999999999975 6777789999999
Q ss_pred eeeecceeeee
Q psy4579 356 GLIEGTYNCYL 366 (368)
Q Consensus 356 V~~l~w~p~~~ 366 (368)
|++|.|+....
T Consensus 622 i~SlsFS~dg~ 632 (707)
T KOG0263|consen 622 IYSLSFSRDGN 632 (707)
T ss_pred eeEEEEecCCC
Confidence 99999997653
|
|
| >KOG0273|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-31 Score=227.67 Aligned_cols=280 Identities=17% Similarity=0.209 Sum_probs=212.5
Q ss_pred cccCceeeEecCCcc-cccCCCCccccccCcceeeeccccC-------------CCCCcEEEEEEecCCCccccccCCcc
Q psy4579 39 LEWPSLTAQWLPDVT-SVQLPNEDAQFDASNYDTDKGTHTS-------------DEQNHLLIASVQLPNEDAQFDASNYD 104 (368)
Q Consensus 39 ~~~~~~~~~~~p~~~-~l~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~i~~~~~~~~~~~~~~~~~~ 104 (368)
++.||.+++|.|-.. .+++|+.+...++|+.......... ....+.-|.++.|..++..+....
T Consensus 177 ~~~~V~~~~WnP~~~~llasg~~~s~ari~~l~e~~~~~~~q~~lrh~~~~~~~s~~~nkdVT~L~Wn~~G~~LatG~-- 254 (524)
T KOG0273|consen 177 HESEVFICAWNPLRDGLLASGSGDSTARIWNLLENSNIGSTQLVLRHCIREGGKSVPSNKDVTSLDWNNDGTLLATGS-- 254 (524)
T ss_pred CCCceEEEecCchhhhhhhccCCccceeeeeehhhccccchhhhhhhhhhhhcccCCccCCcceEEecCCCCeEEEee--
Confidence 788999999999988 8899999988876654321111111 112234577888876555444433
Q ss_pred cCCCCcccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCc------------------
Q psy4579 105 TDKGGNVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENR------------------ 166 (368)
Q Consensus 105 ~~~~g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~------------------ 166 (368)
.||.+++|+.++....++..|+++|.+|+|+..| ++|++++.||++.+||..++.....
T Consensus 255 --~~G~~riw~~~G~l~~tl~~HkgPI~slKWnk~G-~yilS~~vD~ttilwd~~~g~~~q~f~~~s~~~lDVdW~~~~~ 331 (524)
T KOG0273|consen 255 --EDGEARIWNKDGNLISTLGQHKGPIFSLKWNKKG-TYILSGGVDGTTILWDAHTGTVKQQFEFHSAPALDVDWQSNDE 331 (524)
T ss_pred --cCcEEEEEecCchhhhhhhccCCceEEEEEcCCC-CEEEeccCCccEEEEeccCceEEEeeeeccCCccceEEecCce
Confidence 5899999999999999999999999999999999 9999999999999999976531100
Q ss_pred ----------------ccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecc
Q psy4579 167 ----------------VIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGH 230 (368)
Q Consensus 167 ----------------~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 230 (368)
.-.|..++.+|+++|. ++.|+|. +.+|+|+|.|++++||.+... .+...+.+|
T Consensus 332 F~ts~td~~i~V~kv~~~~P~~t~~GH~g~V~---alk~n~t-g~LLaS~SdD~TlkiWs~~~~-------~~~~~l~~H 400 (524)
T KOG0273|consen 332 FATSSTDGCIHVCKVGEDRPVKTFIGHHGEVN---ALKWNPT-GSLLASCSDDGTLKIWSMGQS-------NSVHDLQAH 400 (524)
T ss_pred EeecCCCceEEEEEecCCCcceeeecccCceE---EEEECCC-CceEEEecCCCeeEeeecCCC-------cchhhhhhh
Confidence 0127788999999997 9999999 999999999999999998776 456788899
Q ss_pred cccEeEEEEeeecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeC
Q psy4579 231 TAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMP 310 (368)
Q Consensus 231 ~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p 310 (368)
...|..+.|+|.--++........+ ++ .. ..+.+.+|+..++.++..+. .|..+|.+++|+|
T Consensus 401 skei~t~~wsp~g~v~~n~~~~~~l--~s------------as---~dstV~lwdv~~gv~i~~f~-kH~~pVysvafS~ 462 (524)
T KOG0273|consen 401 SKEIYTIKWSPTGPVTSNPNMNLML--AS------------AS---FDSTVKLWDVESGVPIHTLM-KHQEPVYSVAFSP 462 (524)
T ss_pred ccceeeEeecCCCCccCCCcCCceE--EE------------ee---cCCeEEEEEccCCceeEeec-cCCCceEEEEecC
Confidence 9999999998743333322211111 11 11 22346777888888888876 7999999999999
Q ss_pred CCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeecccCceeeecceee
Q psy4579 311 QNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYNC 364 (368)
Q Consensus 311 ~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p~ 364 (368)
++ .++|+|+.||.|.+|+.+. ....+.+. -.+.|..|+|+-.
T Consensus 463 ~g-~ylAsGs~dg~V~iws~~~----------~~l~~s~~-~~~~Ifel~Wn~~ 504 (524)
T KOG0273|consen 463 NG-RYLASGSLDGCVHIWSTKT----------GKLVKSYQ-GTGGIFELCWNAA 504 (524)
T ss_pred CC-cEEEecCCCCeeEeccccc----------hheeEeec-CCCeEEEEEEcCC
Confidence 99 7999999999999999975 23333443 3566899999853
|
|
| >KOG0284|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-33 Score=232.62 Aligned_cols=263 Identities=19% Similarity=0.324 Sum_probs=210.7
Q ss_pred hhhhhhhhcCcchheeecccccccCceeeEecCCcccccCCCCccccccCcceeeeccccCCCCCcEEEEEEecCCCccc
Q psy4579 18 EEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNEDAQ 97 (368)
Q Consensus 18 ~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 97 (368)
.||..|+- +.+-+.++ ..+++.||+++.|+++++.+++|..+|.|.+|.-+...... ........|.++.|.+.+.+
T Consensus 118 GEFtLWNg-~~fnFEti-lQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpnmnnVk~-~~ahh~eaIRdlafSpnDsk 194 (464)
T KOG0284|consen 118 GEFTLWNG-TSFNFETI-LQAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQPNMNNVKI-IQAHHAEAIRDLAFSPNDSK 194 (464)
T ss_pred ccEEEecC-ceeeHHHH-hhhhcccceeEEEccCCCEEEEcCCCceEEecccchhhhHH-hhHhhhhhhheeccCCCCce
Confidence 45667776 33334333 35688999999999999999999999999888655432211 11112245888999777766
Q ss_pred cccCCcccCCCCcccCCCCC-eeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeec
Q psy4579 98 FDASNYDTDKGGNVQLPNED-AQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTG 176 (368)
Q Consensus 98 ~~~~~~~~~~~g~i~i~~~~-~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~ 176 (368)
+... +.||+|+|||.. ......+.+|.-.|.|++|+|.. .++|+||.|..|++||.+++. ++.++.+
T Consensus 195 F~t~----SdDg~ikiWdf~~~kee~vL~GHgwdVksvdWHP~k-gLiasgskDnlVKlWDprSg~-------cl~tlh~ 262 (464)
T KOG0284|consen 195 FLTC----SDDGTIKIWDFRMPKEERVLRGHGWDVKSVDWHPTK-GLIASGSKDNLVKLWDPRSGS-------CLATLHG 262 (464)
T ss_pred eEEe----cCCCeEEEEeccCCchhheeccCCCCcceeccCCcc-ceeEEccCCceeEeecCCCcc-------hhhhhhh
Confidence 6543 369999999964 44555678999999999999998 899999999999999999986 6788999
Q ss_pred cccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee---ecccccCCCCcc
Q psy4579 177 HTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR---LILGTHTSDEQN 253 (368)
Q Consensus 177 h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~---~~~~~~~~d~~~ 253 (368)
|+..| +.+.|+|+ +++|+|+|.|..++++|+++. +.+..+.+|+..|+++.|+| .++.+++.|+.+
T Consensus 263 HKntV---l~~~f~~n-~N~Llt~skD~~~kv~DiR~m-------kEl~~~r~Hkkdv~~~~WhP~~~~lftsgg~Dgsv 331 (464)
T KOG0284|consen 263 HKNTV---LAVKFNPN-GNWLLTGSKDQSCKVFDIRTM-------KELFTYRGHKKDVTSLTWHPLNESLFTSGGSDGSV 331 (464)
T ss_pred ccceE---EEEEEcCC-CCeeEEccCCceEEEEehhHh-------HHHHHhhcchhhheeeccccccccceeeccCCCce
Confidence 99999 59999999 799999999999999999965 34678899999999999997 578888888888
Q ss_pred ceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCC
Q psy4579 254 HLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKH 333 (368)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~ 333 (368)
..|.+.. .+.+..+..+|...|.+++|+|-| .+|+||+.|.++++|.....
T Consensus 332 vh~~v~~----------------------------~~p~~~i~~AHd~~iwsl~~hPlG-hil~tgsnd~t~rfw~r~rp 382 (464)
T KOG0284|consen 332 VHWVVGL----------------------------EEPLGEIPPAHDGEIWSLAYHPLG-HILATGSNDRTVRFWTRNRP 382 (464)
T ss_pred EEEeccc----------------------------cccccCCCcccccceeeeeccccc-eeEeecCCCcceeeeccCCC
Confidence 8776542 122333445899999999999999 89999999999999998765
Q ss_pred CC
Q psy4579 334 PS 335 (368)
Q Consensus 334 ~~ 335 (368)
..
T Consensus 383 ~d 384 (464)
T KOG0284|consen 383 GD 384 (464)
T ss_pred CC
Confidence 54
|
|
| >KOG0318|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-29 Score=218.24 Aligned_cols=304 Identities=15% Similarity=0.224 Sum_probs=212.2
Q ss_pred cccccCceeeEecCCcccccCCCCccccccCcceeeeccccCCCCC-cEEEEEEec-CCCccccccCCcccCCCCcccCC
Q psy4579 37 HALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQN-HLLIASVQL-PNEDAQFDASNYDTDKGGNVQLP 114 (368)
Q Consensus 37 ~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~-~~~~~~~~~~~~~~~~~g~i~i~ 114 (368)
..+..|+-+++|++|+++++..++.+.-....+-...|+...+... ...|.++.| |.+..++...+ .|++|.++
T Consensus 100 ~v~aG~I~Di~Wd~ds~RI~avGEGrerfg~~F~~DSG~SvGei~GhSr~ins~~~KpsRPfRi~T~s----dDn~v~ff 175 (603)
T KOG0318|consen 100 QVLAGPIKDISWDFDSKRIAAVGEGRERFGHVFLWDSGNSVGEITGHSRRINSVDFKPSRPFRIATGS----DDNTVAFF 175 (603)
T ss_pred eecccccccceeCCCCcEEEEEecCccceeEEEEecCCCccceeeccceeEeeeeccCCCceEEEecc----CCCeEEEe
Confidence 4577899999999999999887777665555566667777777433 346888888 66665555443 68999998
Q ss_pred CCC-eeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeee---ccccceecceeeEEe
Q psy4579 115 NED-AQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFT---GHTAVVEVRYGLSWN 190 (368)
Q Consensus 115 ~~~-~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~---~h~~~v~~~~~i~~~ 190 (368)
.-. .++..+...|.+.|+|++|+|+| .++||++.||.|.+||-.++. ....+. +|++.| |+++|+
T Consensus 176 eGPPFKFk~s~r~HskFV~~VRysPDG-~~Fat~gsDgki~iyDGktge-------~vg~l~~~~aHkGsI---falsWs 244 (603)
T KOG0318|consen 176 EGPPFKFKSSFREHSKFVNCVRYSPDG-SRFATAGSDGKIYIYDGKTGE-------KVGELEDSDAHKGSI---FALSWS 244 (603)
T ss_pred eCCCeeeeecccccccceeeEEECCCC-CeEEEecCCccEEEEcCCCcc-------EEEEecCCCCccccE---EEEEEC
Confidence 754 48888999999999999999999 999999999999999998875 345555 899999 799999
Q ss_pred CCCCCeEEEeeCCCcEEEEECCCCCCCCcc------------------------------------ccceeeeecccccE
Q psy4579 191 PSLNGYLLSASDDHTICLWDINATPKENRV------------------------------------IDAKTIFTGHTAVV 234 (368)
Q Consensus 191 p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~------------------------------------~~~~~~~~~~~~~v 234 (368)
|| +..|+|+|.|.+++|||+.+....... ..++..+.||...|
T Consensus 245 PD-s~~~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWqkd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~I 323 (603)
T KOG0318|consen 245 PD-STQFLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQKDHLITVSLSGTINYLNPSDPSVLKVISGHNKSI 323 (603)
T ss_pred CC-CceEEEecCCceEEEEEeeccceEEEeecCCchhceEEEEEEeCCeEEEEEcCcEEEEecccCCChhheecccccce
Confidence 99 999999999999999999875321110 13456778999999
Q ss_pred eEEEEee--ecccccCCCCccceEEEEeecC----------------Ccc-ccccccccc--------------------
Q psy4579 235 EDYSIHR--LILGTHTSDEQNHLLIASVQLP----------------NED-AQFDASNYD-------------------- 275 (368)
Q Consensus 235 ~~v~~~~--~~~~~~~~d~~~~~~~~~~~~~----------------~~~-~~~~~~~~d-------------------- 275 (368)
++++.++ ..+.+++.|+.+.-|....... ..+ ..+....||
T Consensus 324 TaLtv~~d~~~i~SgsyDG~I~~W~~~~g~~~~~~g~~h~nqI~~~~~~~~~~~~t~g~Dd~l~~~~~~~~~~t~~~~~~ 403 (603)
T KOG0318|consen 324 TALTVSPDGKTIYSGSYDGHINSWDSGSGTSDRLAGKGHTNQIKGMAASESGELFTIGWDDTLRVISLKDNGYTKSEVVK 403 (603)
T ss_pred eEEEEcCCCCEEEeeccCceEEEEecCCccccccccccccceEEEEeecCCCcEEEEecCCeEEEEecccCcccccceee
Confidence 9999876 3344444444444441110000 000 000001110
Q ss_pred ----------------------------------------------------------CCCCCcccccCCCCce-eeeee
Q psy4579 276 ----------------------------------------------------------TDKGDFGGFGSVSGKI-EIEIK 296 (368)
Q Consensus 276 ----------------------------------------------------------~~~~~~~~~~~~~~~~-~~~~~ 296 (368)
...+.+.++-+..+.. .....
T Consensus 404 lg~QP~~lav~~d~~~avv~~~~~iv~l~~~~~~~~~~~~y~~s~vAv~~~~~~vaVGG~Dgkvhvysl~g~~l~ee~~~ 483 (603)
T KOG0318|consen 404 LGSQPKGLAVLSDGGTAVVACISDIVLLQDQTKVSSIPIGYESSAVAVSPDGSEVAVGGQDGKVHVYSLSGDELKEEAKL 483 (603)
T ss_pred cCCCceeEEEcCCCCEEEEEecCcEEEEecCCcceeeccccccceEEEcCCCCEEEEecccceEEEEEecCCcccceeee
Confidence 0000111111111111 11122
Q ss_pred cCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeecccCceeeecceeeee
Q psy4579 297 INHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYNCYL 366 (368)
Q Consensus 297 ~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p~~~ 366 (368)
..|.++|++++++|++ .+||+|...+.+.+||+.... .....+.-|+++|.+|+|+|+..
T Consensus 484 ~~h~a~iT~vaySpd~-~yla~~Da~rkvv~yd~~s~~---------~~~~~w~FHtakI~~~aWsP~n~ 543 (603)
T KOG0318|consen 484 LEHRAAITDVAYSPDG-AYLAAGDASRKVVLYDVASRE---------VKTNRWAFHTAKINCVAWSPNNK 543 (603)
T ss_pred ecccCCceEEEECCCC-cEEEEeccCCcEEEEEcccCc---------eecceeeeeeeeEEEEEeCCCce
Confidence 3799999999999999 689999999999999997522 23335667999999999999864
|
|
| >KOG0645|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=3e-29 Score=199.83 Aligned_cols=272 Identities=16% Similarity=0.237 Sum_probs=202.1
Q ss_pred CceeeEecCC-cccccCCCCccccccCccee----eeccccCCCCCcEEEEEEecCCCccccccCCcccCCCCcccCCCC
Q psy4579 42 PSLTAQWLPD-VTSVQLPNEDAQFDASNYDT----DKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNE 116 (368)
Q Consensus 42 ~~~~~~~~p~-~~~l~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~ 116 (368)
.+-.++|+|- |..||++|.|+.+++|.... ..-+.. ++.....|.++.+.+.+..+.++.| |.++.||..
T Consensus 16 r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~~s~~ck~vl-d~~hkrsVRsvAwsp~g~~La~aSF----D~t~~Iw~k 90 (312)
T KOG0645|consen 16 RVWSVAWHPGKGVILASCGTDKAVRIWSTSSGDSWTCKTVL-DDGHKRSVRSVAWSPHGRYLASASF----DATVVIWKK 90 (312)
T ss_pred cEEEEEeccCCceEEEeecCCceEEEEecCCCCcEEEEEec-cccchheeeeeeecCCCcEEEEeec----cceEEEeec
Confidence 5668999999 89999999999998776542 111111 2333456999999777765555444 678899976
Q ss_pred C---eeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCC
Q psy4579 117 D---AQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSL 193 (368)
Q Consensus 117 ~---~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~ 193 (368)
. .+.+..+.+|...|.|++|+++| ++||+|+.|++|-||.+..... +++...+.+|+..|. .+.|+|.
T Consensus 91 ~~~efecv~~lEGHEnEVK~Vaws~sG-~~LATCSRDKSVWiWe~deddE----fec~aVL~~HtqDVK---~V~WHPt- 161 (312)
T KOG0645|consen 91 EDGEFECVATLEGHENEVKCVAWSASG-NYLATCSRDKSVWIWEIDEDDE----FECIAVLQEHTQDVK---HVIWHPT- 161 (312)
T ss_pred CCCceeEEeeeeccccceeEEEEcCCC-CEEEEeeCCCeEEEEEecCCCc----EEEEeeecccccccc---EEEEcCC-
Confidence 4 36677889999999999999999 9999999999999999985432 457789999999997 9999999
Q ss_pred CCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee--ecccccCCCCccceEEEEeecCCcc-cccc
Q psy4579 194 NGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LILGTHTSDEQNHLLIASVQLPNED-AQFD 270 (368)
Q Consensus 194 ~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~-~~~~ 270 (368)
..+|+|+|.|.+|++|+-..+. -+.+..++.+|...|.+++|++ ..+.+++.|+.+++|.....++..- +.++
T Consensus 162 ~dlL~S~SYDnTIk~~~~~~dd----dW~c~~tl~g~~~TVW~~~F~~~G~rl~s~sdD~tv~Iw~~~~~~~~~~sr~~Y 237 (312)
T KOG0645|consen 162 EDLLFSCSYDNTIKVYRDEDDD----DWECVQTLDGHENTVWSLAFDNIGSRLVSCSDDGTVSIWRLYTDLSGMHSRALY 237 (312)
T ss_pred cceeEEeccCCeEEEEeecCCC----CeeEEEEecCccceEEEEEecCCCceEEEecCCcceEeeeeccCcchhcccceE
Confidence 9999999999999999866321 2577889999999999999986 4677888899999987444433321 3333
Q ss_pred ccccc-------CCCCCcccccCCCC------ceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECC
Q psy4579 271 ASNYD-------TDKGDFGGFGSVSG------KIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYT 331 (368)
Q Consensus 271 ~~~~d-------~~~~~~~~~~~~~~------~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~ 331 (368)
...|+ ...+.+.++....+ ++......+|...|++++|+|...++|++|+.||.|++|.+.
T Consensus 238 ~v~W~~~~IaS~ggD~~i~lf~~s~~~d~p~~~l~~~~~~aHe~dVNsV~w~p~~~~~L~s~~DDG~v~~W~l~ 311 (312)
T KOG0645|consen 238 DVPWDNGVIASGGGDDAIRLFKESDSPDEPSWNLLAKKEGAHEVDVNSVQWNPKVSNRLASGGDDGIVNFWELE 311 (312)
T ss_pred eeeecccceEeccCCCEEEEEEecCCCCCchHHHHHhhhcccccccceEEEcCCCCCceeecCCCceEEEEEec
Confidence 23333 01112222221111 111122237889999999999766889999999999999874
|
|
| >KOG0295|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-29 Score=209.05 Aligned_cols=273 Identities=17% Similarity=0.174 Sum_probs=219.3
Q ss_pred cccCceeeEecCCcccccCCCCccccccCcceeeeccccCCCCCcE-EEEEEecCCCccccccCCcccCCCCcccCCCCC
Q psy4579 39 LEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQNHL-LIASVQLPNEDAQFDASNYDTDKGGNVQLPNED 117 (368)
Q Consensus 39 ~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~ 117 (368)
+.-|+..+-|+|+-..++++++|+++.+| +..+|+....++.+. .+.++.+...+..+.. .+.|-.+++|+.+
T Consensus 107 ~r~~vt~v~~hp~~~~v~~as~d~tikv~--D~~tg~~e~~LrGHt~sv~di~~~a~Gk~l~t----cSsDl~~~LWd~~ 180 (406)
T KOG0295|consen 107 HRSSVTRVIFHPSEALVVSASEDATIKVF--DTETGELERSLRGHTDSVFDISFDASGKYLAT----CSSDLSAKLWDFD 180 (406)
T ss_pred cccceeeeeeccCceEEEEecCCceEEEE--EccchhhhhhhhccccceeEEEEecCccEEEe----cCCccchhheeHH
Confidence 45678889999999999999999999555 557777766665554 4788888654433222 2346679999987
Q ss_pred e--eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCC
Q psy4579 118 A--QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNG 195 (368)
Q Consensus 118 ~--~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~ 195 (368)
+ +....+.+|+..|.++.|-|.| +++++++.|.+|+.|++.++- ++.++.+|..-|+ .++.+.| +.
T Consensus 181 ~~~~c~ks~~gh~h~vS~V~f~P~g-d~ilS~srD~tik~We~~tg~-------cv~t~~~h~ewvr---~v~v~~D-Gt 248 (406)
T KOG0295|consen 181 TFFRCIKSLIGHEHGVSSVFFLPLG-DHILSCSRDNTIKAWECDTGY-------CVKTFPGHSEWVR---MVRVNQD-GT 248 (406)
T ss_pred HHHHHHHHhcCcccceeeEEEEecC-CeeeecccccceeEEecccce-------eEEeccCchHhEE---EEEecCC-ee
Confidence 6 5566788999999999999999 999999999999999999985 6789999999997 8899988 99
Q ss_pred eEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeeecc------cccCCCCccceEEEEeecCCccccc
Q psy4579 196 YLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLIL------GTHTSDEQNHLLIASVQLPNEDAQF 269 (368)
Q Consensus 196 ~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~------~~~~~d~~~~~~~~~~~~~~~~~~~ 269 (368)
++|++|.|.++++|-+.++ ++...+..|..+|.+++|.|... ++++.++...+
T Consensus 249 i~As~s~dqtl~vW~~~t~-------~~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l-------------- 307 (406)
T KOG0295|consen 249 IIASCSNDQTLRVWVVATK-------QCKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVL-------------- 307 (406)
T ss_pred EEEecCCCceEEEEEeccc-------hhhhhhhccccceEEEEecccccCcchhhccCCCCCccEE--------------
Confidence 9999999999999999887 45677889999999999987432 22222211111
Q ss_pred ccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceee
Q psy4579 270 DASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRL 349 (368)
Q Consensus 270 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 349 (368)
.--.+++.+.+|++.++.++.++. +|...|..++|+|.| .+|+|+.+|+++++||++. .+.++.+
T Consensus 308 ---~s~SrDktIk~wdv~tg~cL~tL~-ghdnwVr~~af~p~G-kyi~ScaDDktlrvwdl~~----------~~cmk~~ 372 (406)
T KOG0295|consen 308 ---GSGSRDKTIKIWDVSTGMCLFTLV-GHDNWVRGVAFSPGG-KYILSCADDKTLRVWDLKN----------LQCMKTL 372 (406)
T ss_pred ---EeecccceEEEEeccCCeEEEEEe-cccceeeeeEEcCCC-eEEEEEecCCcEEEEEecc----------ceeeecc
Confidence 112355668889999999999998 999999999999999 5777999999999999986 3445577
Q ss_pred ecccCceeeecceeee
Q psy4579 350 RGHQKEGLIEGTYNCY 365 (368)
Q Consensus 350 ~gh~~~V~~l~w~p~~ 365 (368)
..|+.-|++++|+.+.
T Consensus 373 ~ah~hfvt~lDfh~~~ 388 (406)
T KOG0295|consen 373 EAHEHFVTSLDFHKTA 388 (406)
T ss_pred CCCcceeEEEecCCCC
Confidence 7999999999998653
|
|
| >KOG0279|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.7e-29 Score=197.74 Aligned_cols=219 Identities=16% Similarity=0.155 Sum_probs=171.9
Q ss_pred EEEEEEecCCCccccccCCcccCCCCcccCCCCCe------eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEe
Q psy4579 84 LLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDA------QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWD 157 (368)
Q Consensus 84 ~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~------~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd 157 (368)
..|..+.++..+..+..+. +.|..+.+|++.. .....+.+|...|..+..+++| ++.++++.|+++++||
T Consensus 16 d~Vt~la~~~~~~~~l~sa---srDk~ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~dg-~~alS~swD~~lrlWD 91 (315)
T KOG0279|consen 16 DWVTALAIKIKNSDILVSA---SRDKTIIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSSDG-NFALSASWDGTLRLWD 91 (315)
T ss_pred ceEEEEEeecCCCceEEEc---ccceEEEEEEeccCccccCceeeeeeccceEecceEEccCC-ceEEeccccceEEEEE
Confidence 4455666654443333332 4688899998652 4467788999999999999999 9999999999999999
Q ss_pred CCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeec--ccccEe
Q psy4579 158 INATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTG--HTAVVE 235 (368)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~--~~~~v~ 235 (368)
+.+++ +.+.|.||...| ++++|+|+ +..++|||.|.+|++|++... +..+... +...|+
T Consensus 92 l~~g~-------~t~~f~GH~~dV---lsva~s~d-n~qivSGSrDkTiklwnt~g~--------ck~t~~~~~~~~WVs 152 (315)
T KOG0279|consen 92 LATGE-------STRRFVGHTKDV---LSVAFSTD-NRQIVSGSRDKTIKLWNTLGV--------CKYTIHEDSHREWVS 152 (315)
T ss_pred ecCCc-------EEEEEEecCCce---EEEEecCC-CceeecCCCcceeeeeeeccc--------EEEEEecCCCcCcEE
Confidence 99874 578999999999 59999999 899999999999999999775 3344443 378899
Q ss_pred EEEEeee----cccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCC
Q psy4579 236 DYSIHRL----ILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQ 311 (368)
Q Consensus 236 ~v~~~~~----~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~ 311 (368)
|+.|+|. ++.+++.|+.+++|. +..-+....+. +|++-++.++++||
T Consensus 153 cvrfsP~~~~p~Ivs~s~DktvKvWn----------------------------l~~~~l~~~~~-gh~~~v~t~~vSpD 203 (315)
T KOG0279|consen 153 CVRFSPNESNPIIVSASWDKTVKVWN----------------------------LRNCQLRTTFI-GHSGYVNTVTVSPD 203 (315)
T ss_pred EEEEcCCCCCcEEEEccCCceEEEEc----------------------------cCCcchhhccc-cccccEEEEEECCC
Confidence 9999973 455666666555553 33333334443 99999999999999
Q ss_pred CCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeecccCceeeecceeeee
Q psy4579 312 NPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYNCYL 366 (368)
Q Consensus 312 ~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p~~~ 366 (368)
| .++++|+.||.+.+||++. .+. ....+|...|.+++|+|+-+
T Consensus 204 G-slcasGgkdg~~~LwdL~~----------~k~-lysl~a~~~v~sl~fspnry 246 (315)
T KOG0279|consen 204 G-SLCASGGKDGEAMLWDLNE----------GKN-LYSLEAFDIVNSLCFSPNRY 246 (315)
T ss_pred C-CEEecCCCCceEEEEEccC----------Cce-eEeccCCCeEeeEEecCCce
Confidence 9 7999999999999999985 122 34468999999999999864
|
|
| >KOG0263|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.9e-29 Score=223.03 Aligned_cols=210 Identities=21% Similarity=0.284 Sum_probs=164.9
Q ss_pred CCCcccCCCCCeee-eeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecce
Q psy4579 107 KGGNVQLPNEDAQF-DASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRY 185 (368)
Q Consensus 107 ~~g~i~i~~~~~~~-~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 185 (368)
.|+++++|.++... .....+|..+|+++.|+|.| .++||||.|++.++|...... +.+.+.||-+.|.
T Consensus 471 ED~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~G-yYFatas~D~tArLWs~d~~~-------PlRifaghlsDV~--- 539 (707)
T KOG0263|consen 471 EDSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAPRG-YYFATASHDQTARLWSTDHNK-------PLRIFAGHLSDVD--- 539 (707)
T ss_pred CCcceeeeecccceeEEEecCCCcceeeEEecCCc-eEEEecCCCceeeeeecccCC-------chhhhcccccccc---
Confidence 35666666666533 33455899999999999999 999999999999999988753 7899999999997
Q ss_pred eeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee--ecccccCCCCccceEEEEeecC
Q psy4579 186 GLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LILGTHTSDEQNHLLIASVQLP 263 (368)
Q Consensus 186 ~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~d~~~~~~~~~~~~~ 263 (368)
|++|+|+ .+++++||.|.+|++||+.++ ..++.|.||..+|.+++|+| ..+++++.|+.
T Consensus 540 cv~FHPN-s~Y~aTGSsD~tVRlWDv~~G-------~~VRiF~GH~~~V~al~~Sp~Gr~LaSg~ed~~----------- 600 (707)
T KOG0263|consen 540 CVSFHPN-SNYVATGSSDRTVRLWDVSTG-------NSVRIFTGHKGPVTALAFSPCGRYLASGDEDGL----------- 600 (707)
T ss_pred eEEECCc-ccccccCCCCceEEEEEcCCC-------cEEEEecCCCCceEEEEEcCCCceEeecccCCc-----------
Confidence 9999999 999999999999999999998 56899999999999999997 35555554443
Q ss_pred CcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCC------
Q psy4579 264 NEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKP------ 337 (368)
Q Consensus 264 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~------ 337 (368)
+.+||+.++++..++. +|.+.|.++.|+.+| .+||+|+.|.+|++||+.+.....
T Consensus 601 -----------------I~iWDl~~~~~v~~l~-~Ht~ti~SlsFS~dg-~vLasgg~DnsV~lWD~~~~~~~~~~~~~~ 661 (707)
T KOG0263|consen 601 -----------------IKIWDLANGSLVKQLK-GHTGTIYSLSFSRDG-NVLASGGADNSVRLWDLTKVIELLNLGHIS 661 (707)
T ss_pred -----------------EEEEEcCCCcchhhhh-cccCceeEEEEecCC-CEEEecCCCCeEEEEEchhhcccccccccc
Confidence 4445555677777776 899999999999999 799999999999999987643320
Q ss_pred -------CCC-CCCCCceeeecccCceeeecceeee
Q psy4579 338 -------DPN-GECHPDLRLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 338 -------~~~-~~~~~~~~~~gh~~~V~~l~w~p~~ 365 (368)
.+. .....+-.+..-..+|.+|.|.-+.
T Consensus 662 ~~~~~~~~~~~~~~~llgs~~tK~tpv~~l~FtrrN 697 (707)
T KOG0263|consen 662 TSNSAITQENNASSLLLGSFYTKNTPVVGLHFTRRN 697 (707)
T ss_pred cccccccccCCCCcceeeeeeecCceEEEEEEeccc
Confidence 001 1112233444455678888876544
|
|
| >KOG0277|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=2e-28 Score=193.46 Aligned_cols=211 Identities=22% Similarity=0.337 Sum_probs=177.1
Q ss_pred CCcccCCCCcccCCCCC---eeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeecc
Q psy4579 101 SNYDTDKGGNVQLPNED---AQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGH 177 (368)
Q Consensus 101 ~~~~~~~~g~i~i~~~~---~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h 177 (368)
..|...++|++.|.+.+ +-.+...+.-++.+..++|++..++.+++++.||++++||..... .|+..++.|
T Consensus 30 q~yGl~G~G~L~ile~~~~~gi~e~~s~d~~D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~~~s------~Pi~~~kEH 103 (311)
T KOG0277|consen 30 QHYGLAGNGRLFILEVTDPKGIQECQSYDTEDGLFDVAWSENHENQVIAASGDGSLRLFDLTMPS------KPIHKFKEH 103 (311)
T ss_pred hhcccccCceEEEEecCCCCCeEEEEeeecccceeEeeecCCCcceEEEEecCceEEEeccCCCC------cchhHHHhh
Confidence 35666778888888764 233455677889999999999988999999999999999965443 388999999
Q ss_pred ccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee---ecccccCCCCccc
Q psy4579 178 TAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR---LILGTHTSDEQNH 254 (368)
Q Consensus 178 ~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~---~~~~~~~~d~~~~ 254 (368)
..+| +++.|++.....++++|.|++||+||...+ ..+.++.+|...|+...|+| .++++.++|+..+
T Consensus 104 ~~EV---~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~-------~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~ 173 (311)
T KOG0277|consen 104 KREV---YSVDWNTVRRRIFLTSSWDGTIKLWDPNRP-------NSVQTFNGHNSCIYQAAFSPHIPNLFASASGDGTLR 173 (311)
T ss_pred hhhe---EEeccccccceeEEeeccCCceEeecCCCC-------cceEeecCCccEEEEEecCCCCCCeEEEccCCceEE
Confidence 9999 699999987888999999999999999887 45788999999999999986 6889999888888
Q ss_pred eEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCC
Q psy4579 255 LLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHP 334 (368)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~ 334 (368)
+|..+. .|+... +. .|...|.++.|+...+++++||+.|+.||+||+++.
T Consensus 174 lwdvr~---------------------------~gk~~~-i~-ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~- 223 (311)
T KOG0277|consen 174 LWDVRS---------------------------PGKFMS-IE-AHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNL- 223 (311)
T ss_pred EEEecC---------------------------CCceeE-EE-eccceeEeecccccCCcEEEecCCCceEEEEehhhc-
Confidence 876442 122222 33 799999999999998899999999999999999964
Q ss_pred CCCCCCCCCCCceeeecccCceeeecceeee
Q psy4579 335 SKPDPNGECHPDLRLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 335 ~~~~~~~~~~~~~~~~gh~~~V~~l~w~p~~ 365 (368)
..|+..+.||.-+|..+.|||..
T Consensus 224 --------r~pl~eL~gh~~AVRkvk~Sph~ 246 (311)
T KOG0277|consen 224 --------RTPLFELNGHGLAVRKVKFSPHH 246 (311)
T ss_pred --------cccceeecCCceEEEEEecCcch
Confidence 36777889999999999999975
|
|
| >KOG0285|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.9e-28 Score=202.32 Aligned_cols=247 Identities=19% Similarity=0.335 Sum_probs=194.0
Q ss_pred hheeecccccccCceeeEecCCcccccCCCCccccccCcceeeeccccCCCCCcEE-EEEEecCCCccccccCCcccCCC
Q psy4579 30 LYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQNHLL-IASVQLPNEDAQFDASNYDTDKG 108 (368)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~~~~~~~ 108 (368)
+|+.+.-| +.| |.|+++.|..+.+++|+.|+++.|| +++.|....+...++. +..+.++..-.-+.. ...|
T Consensus 143 l~rVi~gH-lgW-Vr~vavdP~n~wf~tgs~DrtikIw--Dlatg~LkltltGhi~~vr~vavS~rHpYlFs----~ged 214 (460)
T KOG0285|consen 143 LYRVISGH-LGW-VRSVAVDPGNEWFATGSADRTIKIW--DLATGQLKLTLTGHIETVRGVAVSKRHPYLFS----AGED 214 (460)
T ss_pred ehhhhhhc-cce-EEEEeeCCCceeEEecCCCceeEEE--EcccCeEEEeecchhheeeeeeecccCceEEE----ecCC
Confidence 44444444 777 8999999999999999999999555 6677766555554443 666766544332222 2359
Q ss_pred CcccCCCCCe-eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceee
Q psy4579 109 GNVQLPNEDA-QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGL 187 (368)
Q Consensus 109 g~i~i~~~~~-~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i 187 (368)
+.|+.||++. +++....+|-..|+||+.+|.- +.|+||+.|.++|+||+++.. .+.++.||+.+|. .+
T Consensus 215 k~VKCwDLe~nkvIR~YhGHlS~V~~L~lhPTl-dvl~t~grDst~RvWDiRtr~-------~V~~l~GH~~~V~---~V 283 (460)
T KOG0285|consen 215 KQVKCWDLEYNKVIRHYHGHLSGVYCLDLHPTL-DVLVTGGRDSTIRVWDIRTRA-------SVHVLSGHTNPVA---SV 283 (460)
T ss_pred CeeEEEechhhhhHHHhccccceeEEEeccccc-eeEEecCCcceEEEeeecccc-------eEEEecCCCCcce---eE
Confidence 9999999986 5566678999999999999998 999999999999999999875 5789999999996 99
Q ss_pred EEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee--ecccccCCCCccceEEEEeecCCc
Q psy4579 188 SWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LILGTHTSDEQNHLLIASVQLPNE 265 (368)
Q Consensus 188 ~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~d~~~~~~~~~~~~~~~ 265 (368)
.+.|. +..++|||.|++|++||++.+ +.+..+..|...|.+++.+| ..+++++.|
T Consensus 284 ~~~~~-dpqvit~S~D~tvrlWDl~ag-------kt~~tlt~hkksvral~lhP~e~~fASas~d--------------- 340 (460)
T KOG0285|consen 284 MCQPT-DPQVITGSHDSTVRLWDLRAG-------KTMITLTHHKKSVRALCLHPKENLFASASPD--------------- 340 (460)
T ss_pred EeecC-CCceEEecCCceEEEeeeccC-------ceeEeeecccceeeEEecCCchhhhhccCCc---------------
Confidence 99998 778999999999999999998 44677888999999999997 445555432
Q ss_pred ccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCC
Q psy4579 266 DAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPS 335 (368)
Q Consensus 266 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~ 335 (368)
.+..|++..|.....+. +|.+-|++++.+.++ ++++|++.|.+.+||.+....
T Consensus 341 --------------nik~w~~p~g~f~~nls-gh~~iintl~~nsD~--v~~~G~dng~~~fwdwksg~n 393 (460)
T KOG0285|consen 341 --------------NIKQWKLPEGEFLQNLS-GHNAIINTLSVNSDG--VLVSGGDNGSIMFWDWKSGHN 393 (460)
T ss_pred --------------cceeccCCccchhhccc-cccceeeeeeeccCc--eEEEcCCceEEEEEecCcCcc
Confidence 13344445555555543 899999999999988 455999999999999986443
|
|
| >KOG0292|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=2e-28 Score=223.07 Aligned_cols=268 Identities=18% Similarity=0.240 Sum_probs=212.0
Q ss_pred ceeeEecCCcccccCCCCccccccCcceeeeccccCCCCCcEEEEEEecCCCccccccCCcccCCCCcccCCCCCe-eee
Q psy4579 43 SLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDA-QFD 121 (368)
Q Consensus 43 ~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~-~~~ 121 (368)
+-.+.|+|.---+.++--.|.+.+|+|+..+-.+..++. .-.+..+.|.+....+...+ .|.+|++|+.+. ++.
T Consensus 12 vKglsFHP~rPwILtslHsG~IQlWDYRM~tli~rFdeH-dGpVRgv~FH~~qplFVSGG----DDykIkVWnYk~rrcl 86 (1202)
T KOG0292|consen 12 VKGLSFHPKRPWILTSLHSGVIQLWDYRMGTLIDRFDEH-DGPVRGVDFHPTQPLFVSGG----DDYKIKVWNYKTRRCL 86 (1202)
T ss_pred ccceecCCCCCEEEEeecCceeeeehhhhhhHHhhhhcc-CCccceeeecCCCCeEEecC----CccEEEEEecccceeh
Confidence 445889999999999999999999999876554444432 24688888976666555544 689999999876 567
Q ss_pred eccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEee
Q psy4579 122 ASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSAS 201 (368)
Q Consensus 122 ~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s 201 (368)
.++.+|.+.|..+.|++.- .+++++|.|.+|+||+..+.. ++.++.||...| +|.+|+|. ..+++|+|
T Consensus 87 ftL~GHlDYVRt~~FHhey-PWIlSASDDQTIrIWNwqsr~-------~iavltGHnHYV---McAqFhpt-EDlIVSaS 154 (1202)
T KOG0292|consen 87 FTLLGHLDYVRTVFFHHEY-PWILSASDDQTIRIWNWQSRK-------CIAVLTGHNHYV---MCAQFHPT-EDLIVSAS 154 (1202)
T ss_pred hhhccccceeEEeeccCCC-ceEEEccCCCeEEEEeccCCc-------eEEEEecCceEE---EeeccCCc-cceEEEec
Confidence 7899999999999999998 799999999999999999875 689999999999 79999999 89999999
Q ss_pred CCCcEEEEECCCCCCC---Cc--------------cc-----cceeeeecccccEeEEEEee--ecccccCCCCccceEE
Q psy4579 202 DDHTICLWDINATPKE---NR--------------VI-----DAKTIFTGHTAVVEDYSIHR--LILGTHTSDEQNHLLI 257 (368)
Q Consensus 202 ~dg~i~iwd~~~~~~~---~~--------------~~-----~~~~~~~~~~~~v~~v~~~~--~~~~~~~~d~~~~~~~ 257 (368)
-|.+|++||+....+. +. ++ .....+.||...|+.++|+| .++.++++|.++++|-
T Consensus 155 LDQTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~DDRqVKlWr 234 (1202)
T KOG0292|consen 155 LDQTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWR 234 (1202)
T ss_pred ccceEEEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcceEEecCCcceeeEEE
Confidence 9999999998653211 10 11 12356789999999999998 6889999999999986
Q ss_pred EEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCC
Q psy4579 258 ASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKP 337 (368)
Q Consensus 258 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~ 337 (368)
++- ..+|+.. +. .+|.+.|.++-|+|.. .++.|.|+|++|+|||+.+
T Consensus 235 mne----------tKaWEvD----------------tc-rgH~nnVssvlfhp~q-~lIlSnsEDksirVwDm~k----- 281 (1202)
T KOG0292|consen 235 MNE----------TKAWEVD----------------TC-RGHYNNVSSVLFHPHQ-DLILSNSEDKSIRVWDMTK----- 281 (1202)
T ss_pred ecc----------ccceeeh----------------hh-hcccCCcceEEecCcc-ceeEecCCCccEEEEeccc-----
Confidence 652 1223211 12 2899999999999998 6777999999999999976
Q ss_pred CCCCCCCCceeeecccCceeeecceeee
Q psy4579 338 DPNGECHPDLRLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 338 ~~~~~~~~~~~~~gh~~~V~~l~w~p~~ 365 (368)
...+.++..-.++-+.++=+|.+
T Consensus 282 -----Rt~v~tfrrendRFW~laahP~l 304 (1202)
T KOG0292|consen 282 -----RTSVQTFRRENDRFWILAAHPEL 304 (1202)
T ss_pred -----ccceeeeeccCCeEEEEEecCCc
Confidence 34445565556667777777665
|
|
| >KOG0266|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-27 Score=220.11 Aligned_cols=265 Identities=17% Similarity=0.195 Sum_probs=201.9
Q ss_pred cccCceeeEecCCcccccCCCCccccccCcceeeecc--ccCC-CCCcEEEEEEecCCCccccccCCcccCCCCcccCCC
Q psy4579 39 LEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGT--HTSD-EQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPN 115 (368)
Q Consensus 39 ~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~ 115 (368)
..+.+.|+.|+|+|+.++.++.++.+++|.. ..+. .... ......|..+.|.++...+..+ +.|+++++|+
T Consensus 158 ~~~sv~~~~fs~~g~~l~~~~~~~~i~~~~~--~~~~~~~~~~l~~h~~~v~~~~fs~d~~~l~s~----s~D~tiriwd 231 (456)
T KOG0266|consen 158 ECPSVTCVDFSPDGRALAAASSDGLIRIWKL--EGIKSNLLRELSGHTRGVSDVAFSPDGSYLLSG----SDDKTLRIWD 231 (456)
T ss_pred ccCceEEEEEcCCCCeEEEccCCCcEEEeec--ccccchhhccccccccceeeeEECCCCcEEEEe----cCCceEEEee
Confidence 4678999999999999999999999977765 3333 2223 3455679999997766533332 3599999999
Q ss_pred C-Ce-eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCC
Q psy4579 116 E-DA-QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSL 193 (368)
Q Consensus 116 ~-~~-~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~ 193 (368)
. +. ..+..+.+|...|++++|+|++ +++++|+.|++|+|||++++. +...+.+|...|+ +++|+++
T Consensus 232 ~~~~~~~~~~l~gH~~~v~~~~f~p~g-~~i~Sgs~D~tvriWd~~~~~-------~~~~l~~hs~~is---~~~f~~d- 299 (456)
T KOG0266|consen 232 LKDDGRNLKTLKGHSTYVTSVAFSPDG-NLLVSGSDDGTVRIWDVRTGE-------CVRKLKGHSDGIS---GLAFSPD- 299 (456)
T ss_pred ccCCCeEEEEecCCCCceEEEEecCCC-CEEEEecCCCcEEEEeccCCe-------EEEeeeccCCceE---EEEECCC-
Confidence 9 43 5678888999999999999999 999999999999999999864 6799999999997 9999999
Q ss_pred CCeEEEeeCCCcEEEEECCCCCCCCccccceeeeeccccc--EeEEEEee--ecccccCCCCccceEEEEeecCCccccc
Q psy4579 194 NGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAV--VEDYSIHR--LILGTHTSDEQNHLLIASVQLPNEDAQF 269 (368)
Q Consensus 194 ~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~--v~~v~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 269 (368)
+++|++++.|+.|++||+.++... +...+.++... ++++.|+| ..+.++..|+.
T Consensus 300 ~~~l~s~s~d~~i~vwd~~~~~~~-----~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d~~----------------- 357 (456)
T KOG0266|consen 300 GNLLVSASYDGTIRVWDLETGSKL-----CLKLLSGAENSAPVTSVQFSPNGKYLLSASLDRT----------------- 357 (456)
T ss_pred CCEEEEcCCCccEEEEECCCCcee-----eeecccCCCCCCceeEEEECCCCcEEEEecCCCe-----------------
Confidence 999999999999999999998421 33455555444 88999976 23333333333
Q ss_pred ccccccCCCCCcccccCCCCceeeeeecCcccce---eEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCc
Q psy4579 270 DASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEV---NRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPD 346 (368)
Q Consensus 270 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i---~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~ 346 (368)
+.+|++..+....... +|...+ .+...++.+ .++.+|+.|+.|++||+.. ...+
T Consensus 358 -----------~~~w~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~i~sg~~d~~v~~~~~~s----------~~~~ 414 (456)
T KOG0266|consen 358 -----------LKLWDLRSGKSVGTYT-GHSNLVRCIFSPTLSTGG-KLIYSGSEDGSVYVWDSSS----------GGIL 414 (456)
T ss_pred -----------EEEEEccCCcceeeec-ccCCcceeEecccccCCC-CeEEEEeCCceEEEEeCCc----------cchh
Confidence 4445555555555555 666643 334456667 5777999999999999975 4455
Q ss_pred eeeecc-cCceeeecceeeee
Q psy4579 347 LRLRGH-QKEGLIEGTYNCYL 366 (368)
Q Consensus 347 ~~~~gh-~~~V~~l~w~p~~~ 366 (368)
..+.+| ...|..++|+|..+
T Consensus 415 ~~l~~h~~~~~~~~~~~~~~~ 435 (456)
T KOG0266|consen 415 QRLEGHSKAAVSDLSSHPTEN 435 (456)
T ss_pred hhhcCCCCCceeccccCCCcC
Confidence 578899 89999999998653
|
|
| >KOG0279|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.9e-28 Score=192.26 Aligned_cols=240 Identities=15% Similarity=0.161 Sum_probs=178.2
Q ss_pred cccCceeeEecCCcccccCCCCccccccCcceeeeccccCCCCC-cEEEEEEecCCCccccccCCcccCCCCcccCCCCC
Q psy4579 39 LEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQN-HLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNED 117 (368)
Q Consensus 39 ~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~ 117 (368)
+++-+..+.-++||++..++|.|+.+++| ++..|+.+..... ...+.++.+.+++.++... +.|.+|++||.-
T Consensus 62 HsH~v~dv~~s~dg~~alS~swD~~lrlW--Dl~~g~~t~~f~GH~~dVlsva~s~dn~qivSG----SrDkTiklwnt~ 135 (315)
T KOG0279|consen 62 HSHFVSDVVLSSDGNFALSASWDGTLRLW--DLATGESTRRFVGHTKDVLSVAFSTDNRQIVSG----SRDKTIKLWNTL 135 (315)
T ss_pred cceEecceEEccCCceEEeccccceEEEE--EecCCcEEEEEEecCCceEEEEecCCCceeecC----CCcceeeeeeec
Confidence 34567789999999999999999999555 5666655444323 3458888897777666543 369999999999
Q ss_pred eeeeeccccC--CCCceeeEecCCC-CCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCC
Q psy4579 118 AQFDASNYDT--DKGGYGLSWNPSL-NGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLN 194 (368)
Q Consensus 118 ~~~~~~~~~h--~~~v~~l~~sp~~-~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~ 194 (368)
+....+...+ .+=|+|++|+|+. +..|++++.|++|++||+++.+ ....+.||++.++ .+.++|| +
T Consensus 136 g~ck~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~-------l~~~~~gh~~~v~---t~~vSpD-G 204 (315)
T KOG0279|consen 136 GVCKYTIHEDSHREWVSCVRFSPNESNPIIVSASWDKTVKVWNLRNCQ-------LRTTFIGHSGYVN---TVTVSPD-G 204 (315)
T ss_pred ccEEEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCceEEEEccCCcc-------hhhccccccccEE---EEEECCC-C
Confidence 8877776655 6779999999983 3699999999999999999865 5678999999997 9999999 9
Q ss_pred CeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeeecccccCCCCccceEEEEeecCCcccccccccc
Q psy4579 195 GYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNY 274 (368)
Q Consensus 195 ~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 274 (368)
.++++|+.||.+.+||++.++ .+..+. |...|++++|.|. +.|+....-
T Consensus 205 slcasGgkdg~~~LwdL~~~k-------~lysl~-a~~~v~sl~fspn-----------rywL~~at~------------ 253 (315)
T KOG0279|consen 205 SLCASGGKDGEAMLWDLNEGK-------NLYSLE-AFDIVNSLCFSPN-----------RYWLCAATA------------ 253 (315)
T ss_pred CEEecCCCCceEEEEEccCCc-------eeEecc-CCCeEeeEEecCC-----------ceeEeeccC------------
Confidence 999999999999999999873 345444 7889999999982 233222100
Q ss_pred cCCCCCcccccCCCCceeeeeec--------CcccceeEEEEeCCCCcEEEEecCCCeEEEEECC
Q psy4579 275 DTDKGDFGGFGSVSGKIEIEIKI--------NHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYT 331 (368)
Q Consensus 275 d~~~~~~~~~~~~~~~~~~~~~~--------~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~ 331 (368)
..+.+|++.++.++..+.. .......+++|+++|..|+ .|-.|+.|++|.+.
T Consensus 254 ----~sIkIwdl~~~~~v~~l~~d~~g~s~~~~~~~clslaws~dG~tLf-~g~td~~irv~qv~ 313 (315)
T KOG0279|consen 254 ----TSIKIWDLESKAVVEELKLDGIGPSSKAGDPICLSLAWSADGQTLF-AGYTDNVIRVWQVA 313 (315)
T ss_pred ----CceEEEeccchhhhhhccccccccccccCCcEEEEEEEcCCCcEEE-eeecCCcEEEEEee
Confidence 0022333333333322221 1223457789999996555 88999999999985
|
|
| >KOG0276|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.3e-28 Score=214.06 Aligned_cols=241 Identities=17% Similarity=0.234 Sum_probs=188.2
Q ss_pred CceeeEecCCcccccCCCCccccccCcceeeeccccCCCCCcEEEEEEecCCCccccccCCcccCCCCcccCCCCCe-ee
Q psy4579 42 PSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDA-QF 120 (368)
Q Consensus 42 ~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~-~~ 120 (368)
.|-|++++|.-.-++.+-..|.+.||+|+..+-..... -....|....|-....=+. ..+.|+.|++++.++ ..
T Consensus 15 RVKsVd~HPtePw~la~LynG~V~IWnyetqtmVksfe-V~~~PvRa~kfiaRknWiv----~GsDD~~IrVfnynt~ek 89 (794)
T KOG0276|consen 15 RVKSVDFHPTEPWILAALYNGDVQIWNYETQTMVKSFE-VSEVPVRAAKFIARKNWIV----TGSDDMQIRVFNYNTGEK 89 (794)
T ss_pred ceeeeecCCCCceEEEeeecCeeEEEecccceeeeeee-ecccchhhheeeeccceEE----EecCCceEEEEeccccee
Confidence 47789999999999999999999999987664322221 1122233333321111111 124699999999875 66
Q ss_pred eeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEe
Q psy4579 121 DASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSA 200 (368)
Q Consensus 121 ~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~ 200 (368)
+..+..|.+.|.|++.+|.. .+++|+|.|-+|++||.+..- .+.+++.||+..| ++++|+|.+.+.+||+
T Consensus 90 V~~FeAH~DyIR~iavHPt~-P~vLtsSDDm~iKlW~we~~w------a~~qtfeGH~HyV---Mqv~fnPkD~ntFaS~ 159 (794)
T KOG0276|consen 90 VKTFEAHSDYIRSIAVHPTL-PYVLTSSDDMTIKLWDWENEW------ACEQTFEGHEHYV---MQVAFNPKDPNTFASA 159 (794)
T ss_pred eEEeeccccceeeeeecCCC-CeEEecCCccEEEEeeccCce------eeeeEEcCcceEE---EEEEecCCCccceeee
Confidence 77888899999999999998 799999999999999998763 3678999999999 7999999989999999
Q ss_pred eCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee----ecccccCCCCccceEEEEeecCCcccccccccccC
Q psy4579 201 SDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR----LILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDT 276 (368)
Q Consensus 201 s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~----~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~ 276 (368)
|-|++|++|.+... .|..++.+|...|+|++|-+ .++.++.+|..+++
T Consensus 160 sLDrTVKVWslgs~-------~~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKv--------------------- 211 (794)
T KOG0276|consen 160 SLDRTVKVWSLGSP-------HPNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKV--------------------- 211 (794)
T ss_pred eccccEEEEEcCCC-------CCceeeeccccCcceEEeccCCCcceEEecCCCceEEE---------------------
Confidence 99999999999887 56788999999999999963 34455555444444
Q ss_pred CCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCC
Q psy4579 277 DKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHP 334 (368)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~ 334 (368)
||..+..++.++. ||...|+.+.|+|.-+ +++|||+||++|||+-.+..
T Consensus 212 -------WDyQtk~CV~TLe-GHt~Nvs~v~fhp~lp-iiisgsEDGTvriWhs~Ty~ 260 (794)
T KOG0276|consen 212 -------WDYQTKSCVQTLE-GHTNNVSFVFFHPELP-IIISGSEDGTVRIWNSKTYK 260 (794)
T ss_pred -------eecchHHHHHHhh-cccccceEEEecCCCc-EEEEecCCccEEEecCccee
Confidence 4444556666665 9999999999999995 88899999999999987654
|
|
| >KOG0313|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-27 Score=198.13 Aligned_cols=258 Identities=19% Similarity=0.232 Sum_probs=187.8
Q ss_pred cccccCCCCccccccCcceeeeccccCCCCCcEEEEEEec--CCCc-cccccCCcccCCCCcccCCCCCe-----eeeec
Q psy4579 52 VTSVQLPNEDAQFDASNYDTDKGTHTSDEQNHLLIASVQL--PNED-AQFDASNYDTDKGGNVQLPNEDA-----QFDAS 123 (368)
Q Consensus 52 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~-~~~~~~~~~~~~~g~i~i~~~~~-----~~~~~ 123 (368)
++.+.+|++||.+++|.-.-..-....+..+. |.++.+ +... ..+..+ +.|.++.+|..+. .....
T Consensus 115 ~~~IltgsYDg~~riWd~~Gk~~~~~~Ght~~--ik~v~~v~~n~~~~~fvsa----s~Dqtl~Lw~~~~~~~~~~~~~~ 188 (423)
T KOG0313|consen 115 SKWILTGSYDGTSRIWDLKGKSIKTIVGHTGP--IKSVAWVIKNSSSCLFVSA----SMDQTLRLWKWNVGENKVKALKV 188 (423)
T ss_pred CceEEEeecCCeeEEEecCCceEEEEecCCcc--eeeeEEEecCCccceEEEe----cCCceEEEEEecCchhhhhHHhH
Confidence 78899999999998776433221112223322 333333 2221 112222 4689999987653 12333
Q ss_pred cccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCC------------------CCcccccceeeeccccceecce
Q psy4579 124 NYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPK------------------ENRVIDAKTIFTGHTAVVEVRY 185 (368)
Q Consensus 124 ~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~------------------~~~~~~~~~~~~~h~~~v~~~~ 185 (368)
..+|++.|-+++..++| ..+++|+.|.+++||+...... ......|+..+.||+.+|.
T Consensus 189 ~~GHk~~V~sVsv~~sg-tr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs--- 264 (423)
T KOG0313|consen 189 CRGHKRSVDSVSVDSSG-TRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVS--- 264 (423)
T ss_pred hcccccceeEEEecCCC-CeEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEeccccccee---
Confidence 45999999999999999 9999999999999999432210 1112347778999999996
Q ss_pred eeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee--ecccccCCCCccceEEEEeecC
Q psy4579 186 GLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LILGTHTSDEQNHLLIASVQLP 263 (368)
Q Consensus 186 ~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~d~~~~~~~~~~~~~ 263 (368)
++.|++ ...++|+|.|.+|+.||+.++.. ...+. .....++++.++ .++++++.|...++
T Consensus 265 ~V~w~d--~~v~yS~SwDHTIk~WDletg~~-------~~~~~-~~ksl~~i~~~~~~~Ll~~gssdr~irl-------- 326 (423)
T KOG0313|consen 265 SVVWSD--ATVIYSVSWDHTIKVWDLETGGL-------KSTLT-TNKSLNCISYSPLSKLLASGSSDRHIRL-------- 326 (423)
T ss_pred eEEEcC--CCceEeecccceEEEEEeecccc-------eeeee-cCcceeEeecccccceeeecCCCCceee--------
Confidence 999987 78899999999999999999843 33333 345688888886 46666666654444
Q ss_pred CcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCC
Q psy4579 264 NEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGEC 343 (368)
Q Consensus 264 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~ 343 (368)
||++.+. ++.......+|++.|.++.|+|..++.|++||.|+++++||+|.. .
T Consensus 327 ----------~DPR~~~--------gs~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~---------k 379 (423)
T KOG0313|consen 327 ----------WDPRTGD--------GSVVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRST---------K 379 (423)
T ss_pred ----------cCCCCCC--------CceeEEeeecchhhhhheecCCCCceEEEEEecCCeEEEEEeccC---------C
Confidence 5555443 566666666999999999999999999999999999999999962 3
Q ss_pred CCceeeecccCceeeecceee
Q psy4579 344 HPDLRLRGHQKEGLIEGTYNC 364 (368)
Q Consensus 344 ~~~~~~~gh~~~V~~l~w~p~ 364 (368)
.|+..+.+|.+.|.++.|+--
T Consensus 380 ~plydI~~h~DKvl~vdW~~~ 400 (423)
T KOG0313|consen 380 APLYDIAGHNDKVLSVDWNEG 400 (423)
T ss_pred CcceeeccCCceEEEEeccCC
Confidence 478889999999999999843
|
|
| >KOG0264|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.3e-28 Score=205.14 Aligned_cols=224 Identities=31% Similarity=0.466 Sum_probs=181.1
Q ss_pred CCCcccCCCCCe-----------eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeee
Q psy4579 107 KGGNVQLPNEDA-----------QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFT 175 (368)
Q Consensus 107 ~~g~i~i~~~~~-----------~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~ 175 (368)
..|.+.||+... .....+.+|++.-++|+|++..+..|++|+.|++|++||+.......+...+...+.
T Consensus 145 ~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~~~d~~i~lwdi~~~~~~~~~~~p~~~~~ 224 (422)
T KOG0264|consen 145 SSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQEGTLLSGSDDHTICLWDINAESKEDKVVDPKTIFS 224 (422)
T ss_pred CCCCEEEEEeccCCCcccccccCCCceEEEeecccccccccccccceeEeeccCCCcEEEEeccccccCCccccceEEee
Confidence 467788887532 122367889999999999998878999999999999999998777666667888999
Q ss_pred ccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee---ecccccCCCCc
Q psy4579 176 GHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR---LILGTHTSDEQ 252 (368)
Q Consensus 176 ~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~---~~~~~~~~d~~ 252 (368)
+|+..|. .++|+|...++|++++.|+.+.|||+|+. .. .+.+...+|...|+|++|+| .++++++.|++
T Consensus 225 ~h~~~Ve---DV~~h~~h~~lF~sv~dd~~L~iwD~R~~-~~----~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~t 296 (422)
T KOG0264|consen 225 GHEDVVE---DVAWHPLHEDLFGSVGDDGKLMIWDTRSN-TS----KPSHSVKAHSAEVNCVAFNPFNEFILATGSADKT 296 (422)
T ss_pred cCCccee---hhhccccchhhheeecCCCeEEEEEcCCC-CC----CCcccccccCCceeEEEeCCCCCceEEeccCCCc
Confidence 9999997 99999988999999999999999999973 11 45677888999999999987 68889888888
Q ss_pred cceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCC
Q psy4579 253 NHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
+.+|..+ .-........+|...|.+|.|+|..+.+|||++.|+.+.|||+.+
T Consensus 297 V~LwDlR----------------------------nL~~~lh~~e~H~dev~~V~WSPh~etvLASSg~D~rl~vWDls~ 348 (422)
T KOG0264|consen 297 VALWDLR----------------------------NLNKPLHTFEGHEDEVFQVEWSPHNETVLASSGTDRRLNVWDLSR 348 (422)
T ss_pred EEEeech----------------------------hcccCceeccCCCcceEEEEeCCCCCceeEecccCCcEEEEeccc
Confidence 8776543 112222233389999999999999999999999999999999998
Q ss_pred CCCCCC--CCCCCCC--ceeeecccCceeeecceeeee
Q psy4579 333 HPSKPD--PNGECHP--DLRLRGHQKEGLIEGTYNCYL 366 (368)
Q Consensus 333 ~~~~~~--~~~~~~~--~~~~~gh~~~V~~l~w~p~~~ 366 (368)
.+..+. ......| +.+-.||++.|..++|+||.+
T Consensus 349 ig~eq~~eda~dgppEllF~HgGH~~kV~DfsWnp~eP 386 (422)
T KOG0264|consen 349 IGEEQSPEDAEDGPPELLFIHGGHTAKVSDFSWNPNEP 386 (422)
T ss_pred cccccChhhhccCCcceeEEecCcccccccccCCCCCC
Confidence 765542 1222333 344469999999999999975
|
|
| >KOG0277|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.1e-28 Score=190.77 Aligned_cols=204 Identities=20% Similarity=0.262 Sum_probs=167.3
Q ss_pred CCCCcccCCCCCe--eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceec
Q psy4579 106 DKGGNVQLPNEDA--QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEV 183 (368)
Q Consensus 106 ~~~g~i~i~~~~~--~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~ 183 (368)
.+||++++|+... ..+..+++|++.|.++.|++.....++++|-|++|++|+...+. .++++.||..-|
T Consensus 80 ~GDGSLrl~d~~~~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~-------Sv~Tf~gh~~~I-- 150 (311)
T KOG0277|consen 80 SGDGSLRLFDLTMPSKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPN-------SVQTFNGHNSCI-- 150 (311)
T ss_pred ecCceEEEeccCCCCcchhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCCCc-------ceEeecCCccEE--
Confidence 4699999999653 45677889999999999999776788999999999999988764 578999999988
Q ss_pred ceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee---ecccccCCCCccceEEEEe
Q psy4579 184 RYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR---LILGTHTSDEQNHLLIASV 260 (368)
Q Consensus 184 ~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~---~~~~~~~~d~~~~~~~~~~ 260 (368)
|..+|+|...++++++|.|+++++||++...+ ...+..|...+.+..|++ .++++++.|+.++.|..+
T Consensus 151 -y~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk-------~~~i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir- 221 (311)
T KOG0277|consen 151 -YQAAFSPHIPNLFASASGDGTLRLWDVRSPGK-------FMSIEAHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIR- 221 (311)
T ss_pred -EEEecCCCCCCeEEEccCCceEEEEEecCCCc-------eeEEEeccceeEeecccccCCcEEEecCCCceEEEEehh-
Confidence 79999999899999999999999999988742 234788999999999974 678888877766665443
Q ss_pred ecCCcccccccccccCCCCCcccccCCCCce-eeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCC
Q psy4579 261 QLPNEDAQFDASNYDTDKGDFGGFGSVSGKI-EIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDP 339 (368)
Q Consensus 261 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~ 339 (368)
.-+. +..+ .+|.-.|..++|+|....+|||+|.|=++||||.....
T Consensus 222 ---------------------------~~r~pl~eL-~gh~~AVRkvk~Sph~~~lLaSasYDmT~riw~~~~~d----- 268 (311)
T KOG0277|consen 222 ---------------------------NLRTPLFEL-NGHGLAVRKVKFSPHHASLLASASYDMTVRIWDPERQD----- 268 (311)
T ss_pred ---------------------------hccccceee-cCCceEEEEEecCcchhhHhhhccccceEEecccccch-----
Confidence 1222 3334 49999999999999988999999999999999997422
Q ss_pred CCCCCCceeeecccCceeeecceee
Q psy4579 340 NGECHPDLRLRGHQKEGLIEGTYNC 364 (368)
Q Consensus 340 ~~~~~~~~~~~gh~~~V~~l~w~p~ 364 (368)
..+-+...|++-|.+++||+.
T Consensus 269 ----s~~e~~~~HtEFv~g~Dws~~ 289 (311)
T KOG0277|consen 269 ----SAIETVDHHTEFVCGLDWSLF 289 (311)
T ss_pred ----hhhhhhhccceEEeccccccc
Confidence 122255689999999999975
|
|
| >KOG0265|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.6e-27 Score=189.08 Aligned_cols=268 Identities=16% Similarity=0.142 Sum_probs=197.1
Q ss_pred cccCceeeEecCCcccccCCCCccccccCcceeeeccccCCCCCcEEEEEEecCCCccccccCCcccCCCCcccCCCCC-
Q psy4579 39 LEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNED- 117 (368)
Q Consensus 39 ~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~- 117 (368)
++.-+.+++|+|+|+.+|+|+.|..|.+|+-.-.....-.-....-.|..+.+..++..+...+ .|.++..||..
T Consensus 46 h~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~g----tDk~v~~wD~~t 121 (338)
T KOG0265|consen 46 HKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGSHILSCG----TDKTVRGWDAET 121 (338)
T ss_pred CcceEEEEEECCCCCeEeecCCcceEEEEeccccccceeeeccccceeEeeeeccCCCEEEEec----CCceEEEEeccc
Confidence 5666999999999999999999999977762211111000012234688888876665555443 68999999986
Q ss_pred eeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeE
Q psy4579 118 AQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYL 197 (368)
Q Consensus 118 ~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l 197 (368)
++....+..|.+.|+++.-+.-|+.++.+|+.||++++||+++.. +++++. .+-+++ ++.|..+ +..+
T Consensus 122 G~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~-------~~~t~~-~kyqlt---Av~f~d~-s~qv 189 (338)
T KOG0265|consen 122 GKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKE-------AIKTFE-NKYQLT---AVGFKDT-SDQV 189 (338)
T ss_pred ceeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccc-------hhhccc-cceeEE---EEEeccc-ccce
Confidence 577888999999999999777787899999999999999999763 344443 234554 9999988 8899
Q ss_pred EEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee--ecccccCCCCccceEEEEeecCCccccccccccc
Q psy4579 198 LSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LILGTHTSDEQNHLLIASVQLPNEDAQFDASNYD 275 (368)
Q Consensus 198 ~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d 275 (368)
.+|+-|+.|++||++.. ....++.||.++|+.+..++ ..+.+-+-|..+++|..+ .|-
T Consensus 190 ~sggIdn~ikvWd~r~~-------d~~~~lsGh~DtIt~lsls~~gs~llsnsMd~tvrvwd~r-------------p~~ 249 (338)
T KOG0265|consen 190 ISGGIDNDIKVWDLRKN-------DGLYTLSGHADTITGLSLSRYGSFLLSNSMDNTVRVWDVR-------------PFA 249 (338)
T ss_pred eeccccCceeeeccccC-------cceEEeecccCceeeEEeccCCCccccccccceEEEEEec-------------ccC
Confidence 99999999999999987 56889999999999999876 233444444444554433 111
Q ss_pred CCCCCcccccCCCCceeeeeecCcc--c--ceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeec
Q psy4579 276 TDKGDFGGFGSVSGKIEIEIKINHE--G--EVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRG 351 (368)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~h~--~--~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~g 351 (368)
+ +.....+..+|. - ....++|+|++ ..+..|+.|..+++||... ...+..+.|
T Consensus 250 p------------~~R~v~if~g~~hnfeknlL~cswsp~~-~~i~ags~dr~vyvwd~~~----------r~~lyklpG 306 (338)
T KOG0265|consen 250 P------------SQRCVKIFQGHIHNFEKNLLKCSWSPNG-TKITAGSADRFVYVWDTTS----------RRILYKLPG 306 (338)
T ss_pred C------------CCceEEEeecchhhhhhhcceeeccCCC-CccccccccceEEEeeccc----------ccEEEEcCC
Confidence 1 111122222433 2 34678999999 6788999999999999864 345567889
Q ss_pred ccCceeeecceeee
Q psy4579 352 HQKEGLIEGTYNCY 365 (368)
Q Consensus 352 h~~~V~~l~w~p~~ 365 (368)
|.+.|++++|+|.-
T Consensus 307 h~gsvn~~~Fhp~e 320 (338)
T KOG0265|consen 307 HYGSVNEVDFHPTE 320 (338)
T ss_pred cceeEEEeeecCCC
Confidence 99999999999964
|
|
| >KOG0286|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.4e-26 Score=182.43 Aligned_cols=227 Identities=17% Similarity=0.220 Sum_probs=178.7
Q ss_pred eeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEe
Q psy4579 121 DASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSA 200 (368)
Q Consensus 121 ~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~ 200 (368)
...+.+|.++|.++.|++++ +.|++++.||.+.|||.-+..+ .+.+.-...-| +.++|+|. ++++|+|
T Consensus 48 rr~LkGH~~Ki~~~~ws~Ds-r~ivSaSqDGklIvWDs~TtnK-------~haipl~s~WV---MtCA~sPS-g~~VAcG 115 (343)
T KOG0286|consen 48 RRTLKGHLNKIYAMDWSTDS-RRIVSASQDGKLIVWDSFTTNK-------VHAIPLPSSWV---MTCAYSPS-GNFVACG 115 (343)
T ss_pred EEEecccccceeeeEecCCc-CeEEeeccCCeEEEEEcccccc-------eeEEecCceeE---EEEEECCC-CCeEEec
Confidence 36788999999999999998 9999999999999999987653 35556566667 69999999 9999999
Q ss_pred eCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee-ecccccCCCCccceEE-----------------EEeec
Q psy4579 201 SDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR-LILGTHTSDEQNHLLI-----------------ASVQL 262 (368)
Q Consensus 201 s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~-~~~~~~~~d~~~~~~~-----------------~~~~~ 262 (368)
+.|..+.||++.+...... ....+.+.+|+..+.+..|-. ..+.++++|.+..+|. .++.+
T Consensus 116 GLdN~Csiy~ls~~d~~g~-~~v~r~l~gHtgylScC~f~dD~~ilT~SGD~TCalWDie~g~~~~~f~GH~gDV~slsl 194 (343)
T KOG0286|consen 116 GLDNKCSIYPLSTRDAEGN-VRVSRELAGHTGYLSCCRFLDDNHILTGSGDMTCALWDIETGQQTQVFHGHTGDVMSLSL 194 (343)
T ss_pred CcCceeEEEeccccccccc-ceeeeeecCccceeEEEEEcCCCceEecCCCceEEEEEcccceEEEEecCCcccEEEEec
Confidence 9999999999986533221 234567899999999999964 5667888888888883 44556
Q ss_pred CC-cccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCC---
Q psy4579 263 PN-EDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPD--- 338 (368)
Q Consensus 263 ~~-~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~--- 338 (368)
++ +.+.+.....|. .-.+||++++.....+. +|...|++++|.|+| .-|+|||+|++.|+||+|.......
T Consensus 195 ~p~~~ntFvSg~cD~---~aklWD~R~~~c~qtF~-ghesDINsv~ffP~G-~afatGSDD~tcRlyDlRaD~~~a~ys~ 269 (343)
T KOG0286|consen 195 SPSDGNTFVSGGCDK---SAKLWDVRSGQCVQTFE-GHESDINSVRFFPSG-DAFATGSDDATCRLYDLRADQELAVYSH 269 (343)
T ss_pred CCCCCCeEEeccccc---ceeeeeccCcceeEeec-ccccccceEEEccCC-CeeeecCCCceeEEEeecCCcEEeeecc
Confidence 65 555555555554 36789999998888887 999999999999999 7899999999999999997322110
Q ss_pred -------------------------------CCCCCCCceeeecccCceeeecceeee
Q psy4579 339 -------------------------------PNGECHPDLRLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 339 -------------------------------~~~~~~~~~~~~gh~~~V~~l~w~p~~ 365 (368)
..-+.+.+..|.||.++|.+|.-+|+.
T Consensus 270 ~~~~~gitSv~FS~SGRlLfagy~d~~c~vWDtlk~e~vg~L~GHeNRvScl~~s~DG 327 (343)
T KOG0286|consen 270 DSIICGITSVAFSKSGRLLFAGYDDFTCNVWDTLKGERVGVLAGHENRVSCLGVSPDG 327 (343)
T ss_pred CcccCCceeEEEcccccEEEeeecCCceeEeeccccceEEEeeccCCeeEEEEECCCC
Confidence 012234445677888888888888764
|
|
| >KOG0315|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-25 Score=177.53 Aligned_cols=287 Identities=14% Similarity=0.241 Sum_probs=213.0
Q ss_pred hhhhhhhhhhcCcchheeecccccccCceeeEecCCcccccCCCCccccccCcceeeeccc--cCC-CCCcEEEEEEecC
Q psy4579 16 INEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTH--TSD-EQNHLLIASVQLP 92 (368)
Q Consensus 16 ~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~i~~~~~~ 92 (368)
-+-+.+-|...++.++.++--. +..|..+.-+||++.||.++... | +.|++..+.. ... +.....|..+-|.
T Consensus 18 YDhTIRfWqa~tG~C~rTiqh~--dsqVNrLeiTpdk~~LAaa~~qh-v--RlyD~~S~np~Pv~t~e~h~kNVtaVgF~ 92 (311)
T KOG0315|consen 18 YDHTIRFWQALTGICSRTIQHP--DSQVNRLEITPDKKDLAAAGNQH-V--RLYDLNSNNPNPVATFEGHTKNVTAVGFQ 92 (311)
T ss_pred CcceeeeeehhcCeEEEEEecC--ccceeeEEEcCCcchhhhccCCe-e--EEEEccCCCCCceeEEeccCCceEEEEEe
Confidence 3456677999999999876544 34688899999999999987763 3 5566554322 111 1112335555554
Q ss_pred CCccccccCCcccCCCCcccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccce
Q psy4579 93 NEDAQFDASNYDTDKGGNVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKT 172 (368)
Q Consensus 93 ~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~ 172 (368)
..+ +.. |..+.||+++||++........+.|..+|+++..+|+. ..|++|..+|.|++||+....... .
T Consensus 93 ~dg-rWM---yTgseDgt~kIWdlR~~~~qR~~~~~spVn~vvlhpnQ-teLis~dqsg~irvWDl~~~~c~~------~ 161 (311)
T KOG0315|consen 93 CDG-RWM---YTGSEDGTVKIWDLRSLSCQRNYQHNSPVNTVVLHPNQ-TELISGDQSGNIRVWDLGENSCTH------E 161 (311)
T ss_pred ecC-eEE---EecCCCceEEEEeccCcccchhccCCCCcceEEecCCc-ceEEeecCCCcEEEEEccCCcccc------c
Confidence 322 222 44478999999999887777888999999999999997 899999999999999998764321 1
Q ss_pred eeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee--ecccccCCC
Q psy4579 173 IFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LILGTHTSD 250 (368)
Q Consensus 173 ~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~d 250 (368)
......-+++ ++...|+ +.+++.+..-|++.+|++.+... ...+.|+..++.|...+....++| ..+++++.|
T Consensus 162 liPe~~~~i~---sl~v~~d-gsml~a~nnkG~cyvW~l~~~~~-~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~ssd 236 (311)
T KOG0315|consen 162 LIPEDDTSIQ---SLTVMPD-GSMLAAANNKGNCYVWRLLNHQT-ASELEPVHKFQAHNGHILRCLLSPDVKYLATCSSD 236 (311)
T ss_pred cCCCCCccee---eEEEcCC-CcEEEEecCCccEEEEEccCCCc-cccceEhhheecccceEEEEEECCCCcEEEeecCC
Confidence 1222334564 8999999 99999999999999999987543 334577888999999999999987 578888888
Q ss_pred CccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEEC
Q psy4579 251 EQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDY 330 (368)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~ 330 (368)
.++++|-...- + +....+. +|...+..++|+-++ .+|+||+.|+.+++|++
T Consensus 237 ktv~iwn~~~~-------~--------------------kle~~l~-gh~rWvWdc~FS~dg-~YlvTassd~~~rlW~~ 287 (311)
T KOG0315|consen 237 KTVKIWNTDDF-------F--------------------KLELVLT-GHQRWVWDCAFSADG-EYLVTASSDHTARLWDL 287 (311)
T ss_pred ceEEEEecCCc-------e--------------------eeEEEee-cCCceEEeeeeccCc-cEEEecCCCCceeeccc
Confidence 88888743210 0 1223333 899999999999999 57779999999999999
Q ss_pred CCCCCCCCCCCCCCCceeeecccCceeeecce
Q psy4579 331 TKHPSKPDPNGECHPDLRLRGHQKEGLIEGTY 362 (368)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~ 362 (368)
+. ...+..+.||.....+++.+
T Consensus 288 ~~----------~k~v~qy~gh~K~~vc~~ln 309 (311)
T KOG0315|consen 288 SA----------GKEVRQYQGHHKAAVCVALN 309 (311)
T ss_pred cc----------CceeeecCCcccccEEEEee
Confidence 86 44456788998877776643
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.6e-26 Score=222.37 Aligned_cols=283 Identities=14% Similarity=0.082 Sum_probs=193.5
Q ss_pred cccCceeeEecCCcccccCCCCccccccCcceeee--cc--c--cCCCCCcEEEEEEecCCCccccccCCcccCCCCccc
Q psy4579 39 LEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDK--GT--H--TSDEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQ 112 (368)
Q Consensus 39 ~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~--~~--~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~ 112 (368)
+.-++.+++|+|+++++++|+.|+.+++|+..... +. + .........+..+.|.+......+++ +.||.|+
T Consensus 482 ~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~las~---~~Dg~v~ 558 (793)
T PLN00181 482 SSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELASRSKLSGICWNSYIKSQVASS---NFEGVVQ 558 (793)
T ss_pred CCCcEEEEEECCCCCEEEEEeCCCEEEEEECCcccccccccccceEEecccCceeeEEeccCCCCEEEEE---eCCCeEE
Confidence 45679999999999999999999999887653211 00 0 00011123455666643322223222 3589999
Q ss_pred CCCCCe-eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeC
Q psy4579 113 LPNEDA-QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNP 191 (368)
Q Consensus 113 i~~~~~-~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p 191 (368)
+||... +....+.+|.+.|++++|+|..+.+|++|+.||+|++||++++. ....+..+ ..+. ++.|++
T Consensus 559 lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~-------~~~~~~~~-~~v~---~v~~~~ 627 (793)
T PLN00181 559 VWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGV-------SIGTIKTK-ANIC---CVQFPS 627 (793)
T ss_pred EEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCc-------EEEEEecC-CCeE---EEEEeC
Confidence 999864 55666778999999999997433899999999999999998764 34555544 4553 999976
Q ss_pred CCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee-ecccccCCCCccceEEEEeecCCcccccc
Q psy4579 192 SLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR-LILGTHTSDEQNHLLIASVQLPNEDAQFD 270 (368)
Q Consensus 192 ~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 270 (368)
.++.+|++|+.||.|++||++... .+...+.+|...|.++.|.. ..+.+++.|+.+++|.......
T Consensus 628 ~~g~~latgs~dg~I~iwD~~~~~------~~~~~~~~h~~~V~~v~f~~~~~lvs~s~D~~ikiWd~~~~~~------- 694 (793)
T PLN00181 628 ESGRSLAFGSADHKVYYYDLRNPK------LPLCTMIGHSKTVSYVRFVDSSTLVSSSTDNTLKLWDLSMSIS------- 694 (793)
T ss_pred CCCCEEEEEeCCCeEEEEECCCCC------ccceEecCCCCCEEEEEEeCCCEEEEEECCCEEEEEeCCCCcc-------
Confidence 558999999999999999998753 23456778999999999963 4566666777766664321000
Q ss_pred cccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCC---CCCCCCCCce
Q psy4579 271 ASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKP---DPNGECHPDL 347 (368)
Q Consensus 271 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~---~~~~~~~~~~ 347 (368)
.........+. +|...+++++|+|++ .+||+|+.|+.|++|+........ ........-.
T Consensus 695 ---------------~~~~~~l~~~~-gh~~~i~~v~~s~~~-~~lasgs~D~~v~iw~~~~~~~~~s~~~~~~~~~~~~ 757 (793)
T PLN00181 695 ---------------GINETPLHSFM-GHTNVKNFVGLSVSD-GYIATGSETNEVFVYHKAFPMPVLSYKFKTIDPVSGL 757 (793)
T ss_pred ---------------ccCCcceEEEc-CCCCCeeEEEEcCCC-CEEEEEeCCCEEEEEECCCCCceEEEecccCCccccc
Confidence 00112233343 899999999999998 689999999999999976421100 0000000111
Q ss_pred eeecccCceeeecceeee
Q psy4579 348 RLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 348 ~~~gh~~~V~~l~w~p~~ 365 (368)
....|...|.+++|+|..
T Consensus 758 ~~~~~~~~V~~v~ws~~~ 775 (793)
T PLN00181 758 EVDDASQFISSVCWRGQS 775 (793)
T ss_pred ccCCCCcEEEEEEEcCCC
Confidence 234567789999999875
|
|
| >KOG0291|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=4e-26 Score=205.01 Aligned_cols=254 Identities=15% Similarity=0.196 Sum_probs=184.4
Q ss_pred cCceeeEecCCcccccCCCCccccccCcceeeeccccCCCCCcEEEEEEecCCCc---------cccccCCcccCCCCcc
Q psy4579 41 WPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNED---------AQFDASNYDTDKGGNV 111 (368)
Q Consensus 41 ~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---------~~~~~~~~~~~~~g~i 111 (368)
--+.++.|+|....|++|-..|.+.+. ..+++..|.++.+.... +... .+.+++-|.+
T Consensus 266 ~kvtaa~fH~~t~~lvvgFssG~f~Ly-----------elP~f~lih~LSis~~~I~t~~~N~tGDWi--A~g~~klgQL 332 (893)
T KOG0291|consen 266 SKVTAAAFHKGTNLLVVGFSSGEFGLY-----------ELPDFNLIHSLSISDQKILTVSFNSTGDWI--AFGCSKLGQL 332 (893)
T ss_pred cceeeeeccCCceEEEEEecCCeeEEE-----------ecCCceEEEEeecccceeeEEEecccCCEE--EEcCCccceE
Confidence 457899999999999999888776322 22333334333332110 1111 2233456889
Q ss_pred cCCCCCe-eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEe
Q psy4579 112 QLPNEDA-QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWN 190 (368)
Q Consensus 112 ~i~~~~~-~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~ 190 (368)
.+|+... ..+...++|-..++|++++||| +++|||+.||.|+|||...+- +..+|..|++.|+ .+.|+
T Consensus 333 lVweWqsEsYVlKQQgH~~~i~~l~YSpDg-q~iaTG~eDgKVKvWn~~Sgf-------C~vTFteHts~Vt---~v~f~ 401 (893)
T KOG0291|consen 333 LVWEWQSESYVLKQQGHSDRITSLAYSPDG-QLIATGAEDGKVKVWNTQSGF-------CFVTFTEHTSGVT---AVQFT 401 (893)
T ss_pred EEEEeeccceeeeccccccceeeEEECCCC-cEEEeccCCCcEEEEeccCce-------EEEEeccCCCceE---EEEEE
Confidence 9999764 5678889999999999999999 999999999999999999875 6789999999997 99999
Q ss_pred CCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeeccc-ccEeEEEEee--ecccccCCCCccceEEEEeecCCccc
Q psy4579 191 PSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHT-AVVEDYSIHR--LILGTHTSDEQNHLLIASVQLPNEDA 267 (368)
Q Consensus 191 p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~-~~v~~v~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~ 267 (368)
.. ++.+++.|.||+|+.||+... +..++|.... ....|++..| .++..+..
T Consensus 402 ~~-g~~llssSLDGtVRAwDlkRY-------rNfRTft~P~p~QfscvavD~sGelV~AG~~------------------ 455 (893)
T KOG0291|consen 402 AR-GNVLLSSSLDGTVRAWDLKRY-------RNFRTFTSPEPIQFSCVAVDPSGELVCAGAQ------------------ 455 (893)
T ss_pred ec-CCEEEEeecCCeEEeeeeccc-------ceeeeecCCCceeeeEEEEcCCCCEEEeecc------------------
Confidence 98 999999999999999999887 4456665422 2234555543 22222211
Q ss_pred ccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCce
Q psy4579 268 QFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDL 347 (368)
Q Consensus 268 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~ 347 (368)
..-.+.+|+..+|+++-.+. ||.++|.+++|+|.+ .+|||||+|.+||+||+=. .....
T Consensus 456 ---------d~F~IfvWS~qTGqllDiLs-GHEgPVs~l~f~~~~-~~LaS~SWDkTVRiW~if~----------s~~~v 514 (893)
T KOG0291|consen 456 ---------DSFEIFVWSVQTGQLLDILS-GHEGPVSGLSFSPDG-SLLASGSWDKTVRIWDIFS----------SSGTV 514 (893)
T ss_pred ---------ceEEEEEEEeecCeeeehhc-CCCCcceeeEEcccc-CeEEeccccceEEEEEeec----------cCcee
Confidence 11124455566676655554 999999999999999 6999999999999999853 11112
Q ss_pred eeecccCceeeecceeee
Q psy4579 348 RLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 348 ~~~gh~~~V~~l~w~p~~ 365 (368)
.-..+...|.+++|+|..
T Consensus 515 Etl~i~sdvl~vsfrPdG 532 (893)
T KOG0291|consen 515 ETLEIRSDVLAVSFRPDG 532 (893)
T ss_pred eeEeeccceeEEEEcCCC
Confidence 223567788999999875
|
|
| >KOG0281|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.7e-27 Score=194.93 Aligned_cols=271 Identities=18% Similarity=0.288 Sum_probs=208.1
Q ss_pred chHHHHhhhhhhhhhhhhcCcchheeecccccccCceeeEecCCcccccCCCCccccccCcceeeeccccCC-CCCcEEE
Q psy4579 8 DDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSD-EQNHLLI 86 (368)
Q Consensus 8 ~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i 86 (368)
|+..-.+..+.+.|||.+|.-.+...++-| ..+++|+|| |.+.+++||.|.++++|+++. |..... ......+
T Consensus 207 D~kiVSGlrDnTikiWD~n~~~c~~~L~GH--tGSVLCLqy--d~rviisGSSDsTvrvWDv~t--ge~l~tlihHceaV 280 (499)
T KOG0281|consen 207 DEKIVSGLRDNTIKIWDKNSLECLKILTGH--TGSVLCLQY--DERVIVSGSSDSTVRVWDVNT--GEPLNTLIHHCEAV 280 (499)
T ss_pred chhhhcccccCceEEeccccHHHHHhhhcC--CCcEEeeec--cceEEEecCCCceEEEEeccC--CchhhHHhhhccee
Confidence 445556778899999999999888777766 468999999 456889999999998776654 443333 2233445
Q ss_pred EEEecCCCccccccCCcccCCCCcccCCCCCeee----eeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCC
Q psy4579 87 ASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQF----DASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATP 162 (368)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~----~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~ 162 (368)
..+.+.++- ...+++|-++.+|+..... ...+.+|.++|+.+.|+. +++++++.|.+|++|++.+..
T Consensus 281 Lhlrf~ng~------mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd~---kyIVsASgDRTikvW~~st~e 351 (499)
T KOG0281|consen 281 LHLRFSNGY------MVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDD---KYIVSASGDRTIKVWSTSTCE 351 (499)
T ss_pred EEEEEeCCE------EEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeecccc---ceEEEecCCceEEEEecccee
Confidence 556564321 1233578999999987533 345789999999999984 799999999999999999874
Q ss_pred CCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeee
Q psy4579 163 KENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRL 242 (368)
Q Consensus 163 ~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~ 242 (368)
.++++.+|...+. |+.+. +.++++||.|.+|++||+..+ .+++.++||..-|.++.|+..
T Consensus 352 -------fvRtl~gHkRGIA---ClQYr---~rlvVSGSSDntIRlwdi~~G-------~cLRvLeGHEeLvRciRFd~k 411 (499)
T KOG0281|consen 352 -------FVRTLNGHKRGIA---CLQYR---DRLVVSGSSDNTIRLWDIECG-------ACLRVLEGHEELVRCIRFDNK 411 (499)
T ss_pred -------eehhhhcccccce---ehhcc---CeEEEecCCCceEEEEecccc-------HHHHHHhchHHhhhheeecCc
Confidence 6789999999885 77774 789999999999999999998 678999999999999999988
Q ss_pred cccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCC
Q psy4579 243 ILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPS 322 (368)
Q Consensus 243 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~D 322 (368)
.+.++.-|+++++|.....+.+... ++.+.......|++.|..+.|... -+++++.|
T Consensus 412 rIVSGaYDGkikvWdl~aaldpra~--------------------~~~~Cl~~lv~hsgRVFrLQFD~f---qIvsssHd 468 (499)
T KOG0281|consen 412 RIVSGAYDGKIKVWDLQAALDPRAP--------------------ASTLCLRTLVEHSGRVFRLQFDEF---QIISSSHD 468 (499)
T ss_pred eeeeccccceEEEEecccccCCccc--------------------ccchHHHhhhhccceeEEEeecce---EEEeccCC
Confidence 8889999999999877654332111 112222222369999999999743 45688999
Q ss_pred CeEEEEECCCCCCC
Q psy4579 323 SDVLVFDYTKHPSK 336 (368)
Q Consensus 323 g~i~iwd~~~~~~~ 336 (368)
.+|.|||+......
T Consensus 469 dtILiWdFl~~~~~ 482 (499)
T KOG0281|consen 469 DTILIWDFLNGPPS 482 (499)
T ss_pred CeEEEEEcCCCCcc
Confidence 99999999764433
|
|
| >KOG0315|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-25 Score=177.61 Aligned_cols=254 Identities=14% Similarity=0.171 Sum_probs=182.2
Q ss_pred cccccCCCCccccccCcceeeeccccCCCCC-cEEEEEEecCCCccccccCCcccCCCCcccCCCCCe---eeeeccccC
Q psy4579 52 VTSVQLPNEDAQFDASNYDTDKGTHTSDEQN-HLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDA---QFDASNYDT 127 (368)
Q Consensus 52 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~---~~~~~~~~h 127 (368)
.-.|+++|.|-+|++| ...+|.+..+.|. ..-+..+.+.++...+.+++ ...|++||++. ..+.++.+|
T Consensus 10 ~viLvsA~YDhTIRfW--qa~tG~C~rTiqh~dsqVNrLeiTpdk~~LAaa~-----~qhvRlyD~~S~np~Pv~t~e~h 82 (311)
T KOG0315|consen 10 PVILVSAGYDHTIRFW--QALTGICSRTIQHPDSQVNRLEITPDKKDLAAAG-----NQHVRLYDLNSNNPNPVATFEGH 82 (311)
T ss_pred ceEEEeccCcceeeee--ehhcCeEEEEEecCccceeeEEEcCCcchhhhcc-----CCeeEEEEccCCCCCceeEEecc
Confidence 4568899999998555 6677777666443 34588888877666666655 56799999864 356778889
Q ss_pred CCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEE
Q psy4579 128 DKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTIC 207 (368)
Q Consensus 128 ~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~ 207 (368)
.+.|+++.|..+| +.+.|||.||+++|||++.... .....|..+|+ ++..+|. ...|++|..+|.|+
T Consensus 83 ~kNVtaVgF~~dg-rWMyTgseDgt~kIWdlR~~~~--------qR~~~~~spVn---~vvlhpn-QteLis~dqsg~ir 149 (311)
T KOG0315|consen 83 TKNVTAVGFQCDG-RWMYTGSEDGTVKIWDLRSLSC--------QRNYQHNSPVN---TVVLHPN-QTELISGDQSGNIR 149 (311)
T ss_pred CCceEEEEEeecC-eEEEecCCCceEEEEeccCccc--------chhccCCCCcc---eEEecCC-cceEEeecCCCcEE
Confidence 9999999999999 9999999999999999998642 33344778997 9999998 88899999999999
Q ss_pred EEECCCCCCCCccccceeeeecccccEeEEEEee--ecccccCCCCccceEEEEeecCCcccccccccccCCCCCccccc
Q psy4579 208 LWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFG 285 (368)
Q Consensus 208 iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 285 (368)
+||++.......+ ...-..+|.++...+ ..+......+..++|-.-. + +
T Consensus 150 vWDl~~~~c~~~l------iPe~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~--------------~---------~ 200 (311)
T KOG0315|consen 150 VWDLGENSCTHEL------IPEDDTSIQSLTVMPDGSMLAAANNKGNCYVWRLLN--------------H---------Q 200 (311)
T ss_pred EEEccCCcccccc------CCCCCcceeeEEEcCCCcEEEEecCCccEEEEEccC--------------C---------C
Confidence 9999886322111 111234566666553 3333333334444443210 0 0
Q ss_pred CCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeecccCceeeecceee
Q psy4579 286 SVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYNC 364 (368)
Q Consensus 286 ~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p~ 364 (368)
..+.-.......+|.+-|..+.++|++ .+|||+|.|.+++||+.... ......+.||+.-|+.++||-.
T Consensus 201 ~~s~l~P~~k~~ah~~~il~C~lSPd~-k~lat~ssdktv~iwn~~~~---------~kle~~l~gh~rWvWdc~FS~d 269 (311)
T KOG0315|consen 201 TASELEPVHKFQAHNGHILRCLLSPDV-KYLATCSSDKTVKIWNTDDF---------FKLELVLTGHQRWVWDCAFSAD 269 (311)
T ss_pred ccccceEhhheecccceEEEEEECCCC-cEEEeecCCceEEEEecCCc---------eeeEEEeecCCceEEeeeeccC
Confidence 001111222234899999999999999 78999999999999999752 2445578899999999999843
|
|
| >KOG0276|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.1e-27 Score=205.08 Aligned_cols=219 Identities=20% Similarity=0.267 Sum_probs=181.8
Q ss_pred hhhhhhhhhhhcCcchheeecccccccCceeeEecCCcccccCCCCccccccCcceeeeccccCCCCCcEEEEEEecCCC
Q psy4579 15 VINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNE 94 (368)
Q Consensus 15 ~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 94 (368)
+-+..+.||+.++..+.+.+.... -|+++++|.+-.+-+++|++|..+++++|++....+... -...+|.++...+.
T Consensus 32 LynG~V~IWnyetqtmVksfeV~~--~PvRa~kfiaRknWiv~GsDD~~IrVfnynt~ekV~~Fe-AH~DyIR~iavHPt 108 (794)
T KOG0276|consen 32 LYNGDVQIWNYETQTMVKSFEVSE--VPVRAAKFIARKNWIVTGSDDMQIRVFNYNTGEKVKTFE-AHSDYIRSIAVHPT 108 (794)
T ss_pred eecCeeEEEecccceeeeeeeecc--cchhhheeeeccceEEEecCCceEEEEecccceeeEEee-ccccceeeeeecCC
Confidence 345678899999999988776654 499999999999999999999999887776654444443 22356888887544
Q ss_pred ccccccCCcccCCCCcccCCCCCe--eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccce
Q psy4579 95 DAQFDASNYDTDKGGNVQLPNEDA--QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKT 172 (368)
Q Consensus 95 ~~~~~~~~~~~~~~g~i~i~~~~~--~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~ 172 (368)
...+..+ +.|-+|++|+-+. .+..++.+|...|.+++|+|..++.+|+++-|++|++|.+.... +..
T Consensus 109 ~P~vLts----SDDm~iKlW~we~~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrTVKVWslgs~~-------~nf 177 (794)
T KOG0276|consen 109 LPYVLTS----SDDMTIKLWDWENEWACEQTFEGHEHYVMQVAFNPKDPNTFASASLDRTVKVWSLGSPH-------PNF 177 (794)
T ss_pred CCeEEec----CCccEEEEeeccCceeeeeEEcCcceEEEEEEecCCCccceeeeeccccEEEEEcCCCC-------Cce
Confidence 4333332 3589999999876 45667889999999999999998999999999999999998764 678
Q ss_pred eeeccccceecceeeEEeCC-CCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee--ecccccCC
Q psy4579 173 IFTGHTAVVEVRYGLSWNPS-LNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LILGTHTS 249 (368)
Q Consensus 173 ~~~~h~~~v~~~~~i~~~p~-~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~ 249 (368)
++.||...|+ |++|-+. +..+|+||+.|.+|+|||..+. .|+.++.||...|+.+.|+| .++.+++.
T Consensus 178 Tl~gHekGVN---~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk-------~CV~TLeGHt~Nvs~v~fhp~lpiiisgsE 247 (794)
T KOG0276|consen 178 TLEGHEKGVN---CVDYYTGGDKPYLISGADDLTIKVWDYQTK-------SCVQTLEGHTNNVSFVFFHPELPIIISGSE 247 (794)
T ss_pred eeeccccCcc---eEEeccCCCcceEEecCCCceEEEeecchH-------HHHHHhhcccccceEEEecCCCcEEEEecC
Confidence 9999999997 9999874 2459999999999999999987 68899999999999999998 57889999
Q ss_pred CCccceEE
Q psy4579 250 DEQNHLLI 257 (368)
Q Consensus 250 d~~~~~~~ 257 (368)
|+++++|-
T Consensus 248 DGTvriWh 255 (794)
T KOG0276|consen 248 DGTVRIWN 255 (794)
T ss_pred CccEEEec
Confidence 99999984
|
|
| >KOG0282|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=3e-27 Score=202.33 Aligned_cols=248 Identities=16% Similarity=0.162 Sum_probs=177.1
Q ss_pred EEEEEEecCCCccccccCCcccCCCCcccCCCC--CeeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCC
Q psy4579 84 LLIASVQLPNEDAQFDASNYDTDKGGNVQLPNE--DAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINAT 161 (368)
Q Consensus 84 ~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~--~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~ 161 (368)
..|+.+.|-+....+..++ +.|+.|+||+. ++.++.++.+|..+|.+++|+++| ..++|+|.|+.+++||++++
T Consensus 215 kgvsai~~fp~~~hLlLS~---gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g-~~fLS~sfD~~lKlwDtETG 290 (503)
T KOG0282|consen 215 KGVSAIQWFPKKGHLLLSG---GMDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCG-TSFLSASFDRFLKLWDTETG 290 (503)
T ss_pred cccchhhhccceeeEEEec---CCCceEEEEEEecCcceehhhhcchhhhhhhhccccC-Ceeeeeecceeeeeeccccc
Confidence 3466666644333333333 46999999986 467888999999999999999999 99999999999999999998
Q ss_pred CCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee
Q psy4579 162 PKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR 241 (368)
Q Consensus 162 ~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~ 241 (368)
+ ...+.|.+.+. +|+.|+|++.+.|++|+.|+.|+.||+|++ +.+..+..|-..|+.+.|-+
T Consensus 291 ~---------~~~~f~~~~~~--~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~-------kvvqeYd~hLg~i~~i~F~~ 352 (503)
T KOG0282|consen 291 Q---------VLSRFHLDKVP--TCVKFHPDNQNIFLVGGSDKKIRQWDIRSG-------KVVQEYDRHLGAILDITFVD 352 (503)
T ss_pred e---------EEEEEecCCCc--eeeecCCCCCcEEEEecCCCcEEEEeccch-------HHHHHHHhhhhheeeeEEcc
Confidence 5 33344555554 599999996699999999999999999998 45667778889999999964
Q ss_pred --ecccccCCCCccceEEEEeec------------------CCcccccccccccCCCCCcccccCCCCceeeeeecCccc
Q psy4579 242 --LILGTHTSDEQNHLLIASVQL------------------PNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEG 301 (368)
Q Consensus 242 --~~~~~~~~d~~~~~~~~~~~~------------------~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~ 301 (368)
..+.+.+.++..++|...... .+.+..+.....|.....+.....-.......+ .+|..
T Consensus 353 ~g~rFissSDdks~riWe~~~~v~ik~i~~~~~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r~nkkK~f-eGh~v 431 (503)
T KOG0282|consen 353 EGRRFISSSDDKSVRIWENRIPVPIKNIADPEMHTMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPFRLNKKKRF-EGHSV 431 (503)
T ss_pred CCceEeeeccCccEEEEEcCCCccchhhcchhhccCcceecCCCCCeehhhccCceEEEEecccccccCHhhhh-cceec
Confidence 567777888888888654322 122222222222211110000000000001111 26654
Q ss_pred --ceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeecccCceeeecceeee
Q psy4579 302 --EVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 302 --~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p~~ 365 (368)
--..|.|+|+| .+|++|+.||.+.+||.+. +..+..+..|..++..+.|+|.-
T Consensus 432 aGys~~v~fSpDG-~~l~SGdsdG~v~~wdwkt----------~kl~~~lkah~~~ci~v~wHP~e 486 (503)
T KOG0282|consen 432 AGYSCQVDFSPDG-RTLCSGDSDGKVNFWDWKT----------TKLVSKLKAHDQPCIGVDWHPVE 486 (503)
T ss_pred cCceeeEEEcCCC-CeEEeecCCccEEEeechh----------hhhhhccccCCcceEEEEecCCC
Confidence 34668999999 6788999999999999986 56666889999999999999964
|
|
| >KOG0273|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.7e-26 Score=193.90 Aligned_cols=256 Identities=20% Similarity=0.277 Sum_probs=191.5
Q ss_pred hhhhhhhhhcCcchheeecccccccCceeeEecCCcccccCCCCccccccCcceeeeccccCCCCCc-EEEEEEecCCCc
Q psy4579 17 NEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQNH-LLIASVQLPNED 95 (368)
Q Consensus 17 ~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~ 95 (368)
+.+.+||+++-..+. .+ +.+..|+++++|...|+++++++.|++.++|+. ..|+......-+ ..-..+.|...+
T Consensus 256 ~G~~riw~~~G~l~~-tl--~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~--~~g~~~q~f~~~s~~~lDVdW~~~~ 330 (524)
T KOG0273|consen 256 DGEARIWNKDGNLIS-TL--GQHKGPIFSLKWNKKGTYILSGGVDGTTILWDA--HTGTVKQQFEFHSAPALDVDWQSND 330 (524)
T ss_pred CcEEEEEecCchhhh-hh--hccCCceEEEEEcCCCCEEEeccCCccEEEEec--cCceEEEeeeeccCCccceEEecCc
Confidence 445667777654432 23 445789999999999999999999999977754 333322221101 111334554443
Q ss_pred cccccCCcccCCCCcccCCCCCe-eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceee
Q psy4579 96 AQFDASNYDTDKGGNVQLPNEDA-QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIF 174 (368)
Q Consensus 96 ~~~~~~~~~~~~~g~i~i~~~~~-~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~ 174 (368)
..... +.||.|+++.++. ....++.+|.++|.+|.|+|.| .+|+++|.|++++||...... ....+
T Consensus 331 ~F~ts-----~td~~i~V~kv~~~~P~~t~~GH~g~V~alk~n~tg-~LLaS~SdD~TlkiWs~~~~~-------~~~~l 397 (524)
T KOG0273|consen 331 EFATS-----STDGCIHVCKVGEDRPVKTFIGHHGEVNALKWNPTG-SLLASCSDDGTLKIWSMGQSN-------SVHDL 397 (524)
T ss_pred eEeec-----CCCceEEEEEecCCCcceeeecccCceEEEEECCCC-ceEEEecCCCeeEeeecCCCc-------chhhh
Confidence 32222 3489999998875 4566788899999999999999 999999999999999987654 46789
Q ss_pred eccccceecceeeEEeCCC--------CCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee--ecc
Q psy4579 175 TGHTAVVEVRYGLSWNPSL--------NGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LIL 244 (368)
Q Consensus 175 ~~h~~~v~~~~~i~~~p~~--------~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~ 244 (368)
.+|+..| +.+.|+|++ +..+++++.|++|++||+..+ .++..|..|+.+|++++|+| .++
T Consensus 398 ~~Hskei---~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~g-------v~i~~f~kH~~pVysvafS~~g~yl 467 (524)
T KOG0273|consen 398 QAHSKEI---YTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESG-------VPIHTLMKHQEPVYSVAFSPNGRYL 467 (524)
T ss_pred hhhccce---eeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCC-------ceeEeeccCCCceEEEEecCCCcEE
Confidence 9999988 699999973 347999999999999999998 67889999999999999985 567
Q ss_pred cccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCe
Q psy4579 245 GTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSD 324 (368)
Q Consensus 245 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~ 324 (368)
++++.|+.+.+| +..++++.... .-.+.|..++|+-.| ..|..+-.|+.
T Consensus 468 AsGs~dg~V~iw----------------------------s~~~~~l~~s~--~~~~~Ifel~Wn~~G-~kl~~~~sd~~ 516 (524)
T KOG0273|consen 468 ASGSLDGCVHIW----------------------------STKTGKLVKSY--QGTGGIFELCWNAAG-DKLGACASDGS 516 (524)
T ss_pred EecCCCCeeEec----------------------------cccchheeEee--cCCCeEEEEEEcCCC-CEEEEEecCCC
Confidence 777766655554 33344444333 356679999999999 56656678999
Q ss_pred EEEEECC
Q psy4579 325 VLVFDYT 331 (368)
Q Consensus 325 i~iwd~~ 331 (368)
+++-|++
T Consensus 517 vcvldlr 523 (524)
T KOG0273|consen 517 VCVLDLR 523 (524)
T ss_pred ceEEEec
Confidence 9999986
|
|
| >KOG0275|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.4e-27 Score=193.68 Aligned_cols=263 Identities=19% Similarity=0.221 Sum_probs=185.3
Q ss_pred CceeeEecCCcccccCCCCccccccCcceeeecc--ccCCCCCcE-----EEEEEecCCCccccccCCcccCCCCcccCC
Q psy4579 42 PSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGT--HTSDEQNHL-----LIASVQLPNEDAQFDASNYDTDKGGNVQLP 114 (368)
Q Consensus 42 ~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-----~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~ 114 (368)
-+-|..|+|||++|++||.||.+.+|+|-...-. ..+..+++. .+.++.|+ .+....+++ +.||+|++|
T Consensus 215 h~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FS-RDsEMlAsG---sqDGkIKvW 290 (508)
T KOG0275|consen 215 HVECARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFS-RDSEMLASG---SQDGKIKVW 290 (508)
T ss_pred chhheeeCCCCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeec-ccHHHhhcc---CcCCcEEEE
Confidence 3568999999999999999999999988544211 112233322 34555565 445566666 569999999
Q ss_pred CCCeee-eeccc-cCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCC
Q psy4579 115 NEDAQF-DASNY-DTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPS 192 (368)
Q Consensus 115 ~~~~~~-~~~~~-~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~ 192 (368)
.+.... ...+. .|.+.|+|+.|+.++ ..+++++.|.++|+.-+.+++ +.+.++||++.|+ ...|.++
T Consensus 291 ri~tG~ClRrFdrAHtkGvt~l~FSrD~-SqiLS~sfD~tvRiHGlKSGK-------~LKEfrGHsSyvn---~a~ft~d 359 (508)
T KOG0275|consen 291 RIETGQCLRRFDRAHTKGVTCLSFSRDN-SQILSASFDQTVRIHGLKSGK-------CLKEFRGHSSYVN---EATFTDD 359 (508)
T ss_pred EEecchHHHHhhhhhccCeeEEEEccCc-chhhcccccceEEEeccccch-------hHHHhcCcccccc---ceEEcCC
Confidence 987544 44433 699999999999998 899999999999999999886 6789999999997 9999998
Q ss_pred CCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeec--ccccEeEEEEee---ecccccCCCCccceEEE------Eee
Q psy4579 193 LNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTG--HTAVVEDYSIHR---LILGTHTSDEQNHLLIA------SVQ 261 (368)
Q Consensus 193 ~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~--~~~~v~~v~~~~---~~~~~~~~d~~~~~~~~------~~~ 261 (368)
+++++++|.||+|++|+..+. +++.+|+. ...+|+++-.-| .-+..+....++++.-. +..
T Consensus 360 -G~~iisaSsDgtvkvW~~Ktt-------eC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~qGQvVrsfs 431 (508)
T KOG0275|consen 360 -GHHIISASSDGTVKVWHGKTT-------ECLSTFKPLGTDYPVNSVILLPKNPEHFIVCNRSNTVYIMNMQGQVVRSFS 431 (508)
T ss_pred -CCeEEEecCCccEEEecCcch-------hhhhhccCCCCcccceeEEEcCCCCceEEEEcCCCeEEEEeccceEEeeec
Confidence 999999999999999999887 34444432 334455554422 11222222222222110 000
Q ss_pred cC-Ccccccccccc---------cCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEE
Q psy4579 262 LP-NEDAQFDASNY---------DTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFD 329 (368)
Q Consensus 262 ~~-~~~~~~~~~~~---------d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd 329 (368)
.. .++..+..+.. -.+.+.+.++...+|++...+. -|...|..++.+|.. ++||+-++||.+++|.
T Consensus 432 SGkREgGdFi~~~lSpkGewiYcigED~vlYCF~~~sG~LE~tl~-VhEkdvIGl~HHPHq-NllAsYsEDgllKLWk 507 (508)
T KOG0275|consen 432 SGKREGGDFINAILSPKGEWIYCIGEDGVLYCFSVLSGKLERTLP-VHEKDVIGLTHHPHQ-NLLASYSEDGLLKLWK 507 (508)
T ss_pred cCCccCCceEEEEecCCCcEEEEEccCcEEEEEEeecCceeeeee-cccccccccccCccc-chhhhhcccchhhhcC
Confidence 00 11111211111 1344567778888999888887 699999999999998 8999999999999995
|
|
| >KOG0319|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.5e-26 Score=207.33 Aligned_cols=243 Identities=17% Similarity=0.189 Sum_probs=187.1
Q ss_pred cccccCceeeEecCCcccccCCCCccccccCcceeeeccccCC--C-CCcEEEEEEecCCCccccccCCcccCCCCcccC
Q psy4579 37 HALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSD--E-QNHLLIASVQLPNEDAQFDASNYDTDKGGNVQL 113 (368)
Q Consensus 37 ~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i 113 (368)
.-++-.+++++-..+|..|++||.|..+++|.++-.......- . .....|..+.+......+.+++ +.|+++++
T Consensus 362 ~GH~e~vlSL~~~~~g~llat~sKD~svilWr~~~~~~~~~~~a~~~gH~~svgava~~~~~asffvsv---S~D~tlK~ 438 (775)
T KOG0319|consen 362 PGHTEAVLSLDVWSSGDLLATGSKDKSVILWRLNNNCSKSLCVAQANGHTNSVGAVAGSKLGASFFVSV---SQDCTLKL 438 (775)
T ss_pred eCchhheeeeeecccCcEEEEecCCceEEEEEecCCcchhhhhhhhcccccccceeeecccCccEEEEe---cCCceEEE
Confidence 3355678888855567999999999999888663332222221 1 1123355555555555555554 56999999
Q ss_pred CCCCe------eeee----ccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceec
Q psy4579 114 PNEDA------QFDA----SNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEV 183 (368)
Q Consensus 114 ~~~~~------~~~~----~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~ 183 (368)
|++.. .... ....|.+.|+|++.+|+. .++||||.|++.+||+++... ...++.||+..|
T Consensus 439 W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~nd-kLiAT~SqDktaKiW~le~~~-------l~~vLsGH~RGv-- 508 (775)
T KOG0319|consen 439 WDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAPND-KLIATGSQDKTAKIWDLEQLR-------LLGVLSGHTRGV-- 508 (775)
T ss_pred ecCCCcccccccceehhhHHHHhhcccccceEecCCC-ceEEecccccceeeecccCce-------EEEEeeCCccce--
Confidence 99765 1112 345699999999999998 999999999999999999553 678999999999
Q ss_pred ceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee--ecccccCCCCccceEEEEee
Q psy4579 184 RYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LILGTHTSDEQNHLLIASVQ 261 (368)
Q Consensus 184 ~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~d~~~~~~~~~~~ 261 (368)
+++.|+|. .+.++|+|.|++|+||.+.+. .++++|.||+..|..+.|-. .-+.+++.|
T Consensus 509 -w~V~Fs~~-dq~laT~SgD~TvKIW~is~f-------SClkT~eGH~~aVlra~F~~~~~qliS~~ad----------- 568 (775)
T KOG0319|consen 509 -WCVSFSKN-DQLLATCSGDKTVKIWSISTF-------SCLKTFEGHTSAVLRASFIRNGKQLISAGAD----------- 568 (775)
T ss_pred -EEEEeccc-cceeEeccCCceEEEEEeccc-------eeeeeecCccceeEeeeeeeCCcEEEeccCC-----------
Confidence 69999998 899999999999999999997 78999999999999888853 233333333
Q ss_pred cCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECC
Q psy4579 262 LPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYT 331 (368)
Q Consensus 262 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~ 331 (368)
|.+.+|+..++.++.++. +|.+.|++++-+|.. ..++||+.||.|.+|.=-
T Consensus 569 -----------------GliKlWnikt~eC~~tlD-~H~DrvWaL~~~~~~-~~~~tgg~Dg~i~~wkD~ 619 (775)
T KOG0319|consen 569 -----------------GLIKLWNIKTNECEMTLD-AHNDRVWALSVSPLL-DMFVTGGGDGRIIFWKDV 619 (775)
T ss_pred -----------------CcEEEEeccchhhhhhhh-hccceeEEEeecCcc-ceeEecCCCeEEEEeecC
Confidence 345555556677777776 899999999999999 588899999999999743
|
|
| >KOG0296|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.9e-25 Score=185.17 Aligned_cols=290 Identities=15% Similarity=0.177 Sum_probs=207.5
Q ss_pred cccccCceeeEecCCcccccCCCCccccccCcceeeeccccCCCCC-cEEEEEEecCCCccccccCCcccCCCCcccCCC
Q psy4579 37 HALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQN-HLLIASVQLPNEDAQFDASNYDTDKGGNVQLPN 115 (368)
Q Consensus 37 ~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~ 115 (368)
..+.-++.++..+|+.+.+++|+.|..- +.|++..|........ ...|.++.|..+...+. .+ +-+|.|++|.
T Consensus 61 ~~H~~svFavsl~P~~~l~aTGGgDD~A--flW~~~~ge~~~eltgHKDSVt~~~FshdgtlLA-TG---dmsG~v~v~~ 134 (399)
T KOG0296|consen 61 DKHTDSVFAVSLHPNNNLVATGGGDDLA--FLWDISTGEFAGELTGHKDSVTCCSFSHDGTLLA-TG---DMSGKVLVFK 134 (399)
T ss_pred hhcCCceEEEEeCCCCceEEecCCCceE--EEEEccCCcceeEecCCCCceEEEEEccCceEEE-ec---CCCccEEEEE
Confidence 4467789999999999999999998876 6677888877666433 35688888987665444 33 3579999999
Q ss_pred CCeeeeec-cccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCC
Q psy4579 116 EDAQFDAS-NYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLN 194 (368)
Q Consensus 116 ~~~~~~~~-~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~ 194 (368)
...+.... +...-..|.-++|+|.+ ..|+.|+.||.+.+|.+.++. ..+.+.||..+++ +=.|.|+ +
T Consensus 135 ~stg~~~~~~~~e~~dieWl~WHp~a-~illAG~~DGsvWmw~ip~~~-------~~kv~~Gh~~~ct---~G~f~pd-G 202 (399)
T KOG0296|consen 135 VSTGGEQWKLDQEVEDIEWLKWHPRA-HILLAGSTDGSVWMWQIPSQA-------LCKVMSGHNSPCT---CGEFIPD-G 202 (399)
T ss_pred cccCceEEEeecccCceEEEEecccc-cEEEeecCCCcEEEEECCCcc-------eeeEecCCCCCcc---cccccCC-C
Confidence 87654443 33466778889999998 999999999999999998853 4588999999997 9999999 9
Q ss_pred CeEEEeeCCCcEEEEECCCCCCCCccccceeeeecc-cccEeEEEEe--eecccccCCCCccceE--------EE-----
Q psy4579 195 GYLLSASDDHTICLWDINATPKENRVIDAKTIFTGH-TAVVEDYSIH--RLILGTHTSDEQNHLL--------IA----- 258 (368)
Q Consensus 195 ~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~v~~v~~~--~~~~~~~~~d~~~~~~--------~~----- 258 (368)
..++++..||+|++||+.++. ++..+.+. .....++.++ +..+..++.++..++. ..
T Consensus 203 Kr~~tgy~dgti~~Wn~ktg~-------p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~ 275 (399)
T KOG0296|consen 203 KRILTGYDDGTIIVWNPKTGQ-------PLHKITQAEGLELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTV 275 (399)
T ss_pred ceEEEEecCceEEEEecCCCc-------eeEEecccccCcCCccccccccceeEeccCCccEEEEccccceEEEecCCCC
Confidence 999999999999999999984 33333311 1112223332 1222222222221111 11
Q ss_pred ------------EeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEE
Q psy4579 259 ------------SVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVL 326 (368)
Q Consensus 259 ------------~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~ 326 (368)
++.+.+....+.+.+...-.|.+.+||+...++.... .|..+|..+.|-++. + |++++.||.|+
T Consensus 276 ~~l~~~~e~~~esve~~~~ss~lpL~A~G~vdG~i~iyD~a~~~~R~~c--~he~~V~~l~w~~t~-~-l~t~c~~g~v~ 351 (399)
T KOG0296|consen 276 PELKPSQEELDESVESIPSSSKLPLAACGSVDGTIAIYDLAASTLRHIC--EHEDGVTKLKWLNTD-Y-LLTACANGKVR 351 (399)
T ss_pred ccccccchhhhhhhhhcccccccchhhcccccceEEEEecccchhheec--cCCCceEEEEEcCcc-h-heeeccCceEE
Confidence 1111122222333344455677888888877766555 599999999999933 4 45889999999
Q ss_pred EEECCCCCCCCCCCCCCCCceeeecccCceeeecceeee
Q psy4579 327 VFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 327 iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p~~ 365 (368)
+||.|. .+....+.||...|++++.+|+-
T Consensus 352 ~wDaRt----------G~l~~~y~GH~~~Il~f~ls~~~ 380 (399)
T KOG0296|consen 352 QWDART----------GQLKFTYTGHQMGILDFALSPQK 380 (399)
T ss_pred eeeccc----------cceEEEEecCchheeEEEEcCCC
Confidence 999987 56667899999999999999864
|
|
| >KOG0281|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.1e-27 Score=193.34 Aligned_cols=259 Identities=17% Similarity=0.210 Sum_probs=197.7
Q ss_pred CceeeEecCCcccccCCCCccccccCcceeeeccccCCCCC-cEEEEEEecCCCccccccCCcccCCCCcccCCCCCe-e
Q psy4579 42 PSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQN-HLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDA-Q 119 (368)
Q Consensus 42 ~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~-~ 119 (368)
.+.|+|| |...+++|..|+++.+|+-+.. .......+ .-.+.++++... +..++ +.|.+|++||.++ +
T Consensus 199 gVYClQY--DD~kiVSGlrDnTikiWD~n~~--~c~~~L~GHtGSVLCLqyd~r---viisG---SSDsTvrvWDv~tge 268 (499)
T KOG0281|consen 199 GVYCLQY--DDEKIVSGLRDNTIKIWDKNSL--ECLKILTGHTGSVLCLQYDER---VIVSG---SSDSTVRVWDVNTGE 268 (499)
T ss_pred ceEEEEe--cchhhhcccccCceEEeccccH--HHHHhhhcCCCcEEeeeccce---EEEec---CCCceEEEEeccCCc
Confidence 5788998 6678899999999987764332 22222222 234667776543 33333 4589999999875 5
Q ss_pred eeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEE
Q psy4579 120 FDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLS 199 (368)
Q Consensus 120 ~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s 199 (368)
.+.++++|..+|..+.|+. .+++|++.|.++.+||+..... ..+.+.+.||...|. .+.|. ..+++|
T Consensus 269 ~l~tlihHceaVLhlrf~n---g~mvtcSkDrsiaVWdm~sps~----it~rrVLvGHrAaVN---vVdfd---~kyIVs 335 (499)
T KOG0281|consen 269 PLNTLIHHCEAVLHLRFSN---GYMVTCSKDRSIAVWDMASPTD----ITLRRVLVGHRAAVN---VVDFD---DKYIVS 335 (499)
T ss_pred hhhHHhhhcceeEEEEEeC---CEEEEecCCceeEEEeccCchH----HHHHHHHhhhhhhee---eeccc---cceEEE
Confidence 6778899999999999993 7999999999999999987642 225678899999996 88885 669999
Q ss_pred eeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeeecccccCCCCccceEEEEeecCCcccccccccccCCCC
Q psy4579 200 ASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKG 279 (368)
Q Consensus 200 ~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 279 (368)
+|.|.+|++|++.+. ..++++.+|...|.|+.+...++.++++|.++++|.+.
T Consensus 336 ASgDRTikvW~~st~-------efvRtl~gHkRGIAClQYr~rlvVSGSSDntIRlwdi~-------------------- 388 (499)
T KOG0281|consen 336 ASGDRTIKVWSTSTC-------EFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIE-------------------- 388 (499)
T ss_pred ecCCceEEEEeccce-------eeehhhhcccccceehhccCeEEEecCCCceEEEEecc--------------------
Confidence 999999999999997 56889999999999999999889999988888776543
Q ss_pred CcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeecccCceeee
Q psy4579 280 DFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIE 359 (368)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l 359 (368)
.|.+...+. ||..-|.|+.|... -+++|+.||+|++||+..........+ ...+..+..|+++|..+
T Consensus 389 --------~G~cLRvLe-GHEeLvRciRFd~k---rIVSGaYDGkikvWdl~aaldpra~~~-~~Cl~~lv~hsgRVFrL 455 (499)
T KOG0281|consen 389 --------CGACLRVLE-GHEELVRCIRFDNK---RIVSGAYDGKIKVWDLQAALDPRAPAS-TLCLRTLVEHSGRVFRL 455 (499)
T ss_pred --------ccHHHHHHh-chHHhhhheeecCc---eeeeccccceEEEEecccccCCccccc-chHHHhhhhccceeEEE
Confidence 344444343 99999999999854 467999999999999976433222211 12234567899999999
Q ss_pred ccee
Q psy4579 360 GTYN 363 (368)
Q Consensus 360 ~w~p 363 (368)
.|.-
T Consensus 456 QFD~ 459 (499)
T KOG0281|consen 456 QFDE 459 (499)
T ss_pred eecc
Confidence 8863
|
|
| >cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.4e-25 Score=191.97 Aligned_cols=261 Identities=19% Similarity=0.258 Sum_probs=193.3
Q ss_pred cccCceeeEecCCcccccCCCCccccccCcceeeeccccCC-CCCcEEEEEEecCCCccccccCCcccCCCCcccCCCCC
Q psy4579 39 LEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSD-EQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNED 117 (368)
Q Consensus 39 ~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~ 117 (368)
+..|+.+++|+|+++.+++++.+|.+.+|+.+ .+..... ......+..+.+.+....+.... .+|.+++|+..
T Consensus 8 h~~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~----~~~~i~i~~~~ 81 (289)
T cd00200 8 HTGGVTCVAFSPDGKLLATGSGDGTIKVWDLE--TGELLRTLKGHTGPVRDVAASADGTYLASGS----SDKTIRLWDLE 81 (289)
T ss_pred cCCCEEEEEEcCCCCEEEEeecCcEEEEEEee--CCCcEEEEecCCcceeEEEECCCCCEEEEEc----CCCeEEEEEcC
Confidence 45789999999999999999999999666544 2222111 11123345666654443333332 48999999987
Q ss_pred e-eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCe
Q psy4579 118 A-QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGY 196 (368)
Q Consensus 118 ~-~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~ 196 (368)
. +....+..|...|.++.|+|++ .++++++.||.|++||+.+.+ ....+..|...+. +++|+|+ +.+
T Consensus 82 ~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~-------~~~~~~~~~~~i~---~~~~~~~-~~~ 149 (289)
T cd00200 82 TGECVRTLTGHTSYVSSVAFSPDG-RILSSSSRDKTIKVWDVETGK-------CLTTLRGHTDWVN---SVAFSPD-GTF 149 (289)
T ss_pred cccceEEEeccCCcEEEEEEcCCC-CEEEEecCCCeEEEEECCCcE-------EEEEeccCCCcEE---EEEEcCc-CCE
Confidence 6 4555667888999999999997 888888889999999998653 4566778888886 9999998 888
Q ss_pred EEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeee--cccccCCCCccceEEEEeecCCcccccccccc
Q psy4579 197 LLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRL--ILGTHTSDEQNHLLIASVQLPNEDAQFDASNY 274 (368)
Q Consensus 197 l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~--~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 274 (368)
+++++.||.|++||++.+ .+...+..|...+.++.|++. .+.+++.++
T Consensus 150 l~~~~~~~~i~i~d~~~~-------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~----------------------- 199 (289)
T cd00200 150 VASSSQDGTIKLWDLRTG-------KCVATLTGHTGEVNSVAFSPDGEKLLSSSSDG----------------------- 199 (289)
T ss_pred EEEEcCCCcEEEEEcccc-------ccceeEecCccccceEEECCCcCEEEEecCCC-----------------------
Confidence 888888999999999865 345667778888999999863 222222222
Q ss_pred cCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeecccC
Q psy4579 275 DTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQK 354 (368)
Q Consensus 275 d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~ 354 (368)
.+.+|+...++....+. .|...|.+++|+|++ .++++++.||.|++||+.. ..+...+.+|..
T Consensus 200 -----~i~i~d~~~~~~~~~~~-~~~~~i~~~~~~~~~-~~~~~~~~~~~i~i~~~~~----------~~~~~~~~~~~~ 262 (289)
T cd00200 200 -----TIKLWDLSTGKCLGTLR-GHENGVNSVAFSPDG-YLLASGSEDGTIRVWDLRT----------GECVQTLSGHTN 262 (289)
T ss_pred -----cEEEEECCCCceecchh-hcCCceEEEEEcCCC-cEEEEEcCCCcEEEEEcCC----------ceeEEEccccCC
Confidence 23334444444444443 688899999999996 7888888899999999975 344556678999
Q ss_pred ceeeecceee
Q psy4579 355 EGLIEGTYNC 364 (368)
Q Consensus 355 ~V~~l~w~p~ 364 (368)
.|.+++|+|+
T Consensus 263 ~i~~~~~~~~ 272 (289)
T cd00200 263 SVTSLAWSPD 272 (289)
T ss_pred cEEEEEECCC
Confidence 9999999995
|
|
| >KOG0319|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.5e-26 Score=204.26 Aligned_cols=266 Identities=15% Similarity=0.204 Sum_probs=198.7
Q ss_pred ceeeEe-cCCcccccCCCCccccccCcceeeeccccCCCCCcEEEEEEecCCCccccccCCcccCCCCcccCCCCCee--
Q psy4579 43 SLTAQW-LPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQ-- 119 (368)
Q Consensus 43 ~~~~~~-~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~-- 119 (368)
+++++| .|+-++|++++..+.+++. .........-......|.++.....+ .+.+++ ++|.++.+|.++..
T Consensus 326 I~Dm~~lG~e~~~laVATNs~~lr~y--~~~~~~c~ii~GH~e~vlSL~~~~~g-~llat~---sKD~svilWr~~~~~~ 399 (775)
T KOG0319|consen 326 ILDMKFLGPEESHLAVATNSPELRLY--TLPTSYCQIIPGHTEAVLSLDVWSSG-DLLATG---SKDKSVILWRLNNNCS 399 (775)
T ss_pred heeeeecCCccceEEEEeCCCceEEE--ecCCCceEEEeCchhheeeeeecccC-cEEEEe---cCCceEEEEEecCCcc
Confidence 555665 5888999999998887443 32221111112222345555532222 233333 57999999966322
Q ss_pred ---eeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCc--ccccceeeeccccceecceeeEEeCCCC
Q psy4579 120 ---FDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENR--VIDAKTIFTGHTAVVEVRYGLSWNPSLN 194 (368)
Q Consensus 120 ---~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~--~~~~~~~~~~h~~~v~~~~~i~~~p~~~ 194 (368)
....-.+|...|.+++++..++.+|+++|.|.++++|++...+.... .+....+...|...|+ +++.+|+ .
T Consensus 400 ~~~~~a~~~gH~~svgava~~~~~asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN---~Vaia~n-d 475 (775)
T KOG0319|consen 400 KSLCVAQANGHTNSVGAVAGSKLGASFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAHDKDIN---CVAIAPN-D 475 (775)
T ss_pred hhhhhhhhcccccccceeeecccCccEEEEecCCceEEEecCCCcccccccceehhhHHHHhhccccc---ceEecCC-C
Confidence 23345679999999999999889999999999999999987322111 1112224567999997 9999999 8
Q ss_pred CeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeee--cccccCCCCccceEEEEeecCCcccccccc
Q psy4579 195 GYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRL--ILGTHTSDEQNHLLIASVQLPNEDAQFDAS 272 (368)
Q Consensus 195 ~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~--~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 272 (368)
.++||||.|.+.+||++.+. ....++.||+..|.+|.|++. +++++++|.++++|-.+
T Consensus 476 kLiAT~SqDktaKiW~le~~-------~l~~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is------------- 535 (775)
T KOG0319|consen 476 KLIATGSQDKTAKIWDLEQL-------RLLGVLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSIS------------- 535 (775)
T ss_pred ceEEecccccceeeecccCc-------eEEEEeeCCccceEEEEeccccceeEeccCCceEEEEEec-------------
Confidence 99999999999999999965 567899999999999999986 99999999999998654
Q ss_pred cccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeecc
Q psy4579 273 NYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGH 352 (368)
Q Consensus 273 ~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh 352 (368)
+.++..++. ||...|..+.|-.++. -|+|++.||.|++|++++ +.|. ..+.+|
T Consensus 536 ---------------~fSClkT~e-GH~~aVlra~F~~~~~-qliS~~adGliKlWnikt--------~eC~--~tlD~H 588 (775)
T KOG0319|consen 536 ---------------TFSCLKTFE-GHTSAVLRASFIRNGK-QLISAGADGLIKLWNIKT--------NECE--MTLDAH 588 (775)
T ss_pred ---------------cceeeeeec-CccceeEeeeeeeCCc-EEEeccCCCcEEEEeccc--------hhhh--hhhhhc
Confidence 234455555 9999999999999995 455999999999999986 3344 488999
Q ss_pred cCceeeecceeee
Q psy4579 353 QKEGLIEGTYNCY 365 (368)
Q Consensus 353 ~~~V~~l~w~p~~ 365 (368)
.++|++++-+|..
T Consensus 589 ~DrvWaL~~~~~~ 601 (775)
T KOG0319|consen 589 NDRVWALSVSPLL 601 (775)
T ss_pred cceeEEEeecCcc
Confidence 9999999888754
|
|
| >KOG0316|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.3e-25 Score=173.55 Aligned_cols=264 Identities=13% Similarity=0.079 Sum_probs=192.5
Q ss_pred cccCceeeEecCCcccccCCCCccccccCcceeeeccccCCCCCcEEEEEEecCCCccccccCCcccCCCCcccCCCCC-
Q psy4579 39 LEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNED- 117 (368)
Q Consensus 39 ~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~- 117 (368)
...|++.+.|.-||++..+++.|+++++|+-.-..-.+++....+. |..+....++.++.+.+ +|..+.+||.+
T Consensus 16 ~qgaV~avryN~dGnY~ltcGsdrtvrLWNp~rg~liktYsghG~E-VlD~~~s~Dnskf~s~G----gDk~v~vwDV~T 90 (307)
T KOG0316|consen 16 AQGAVRAVRYNVDGNYCLTCGSDRTVRLWNPLRGALIKTYSGHGHE-VLDAALSSDNSKFASCG----GDKAVQVWDVNT 90 (307)
T ss_pred cccceEEEEEccCCCEEEEcCCCceEEeecccccceeeeecCCCce-eeeccccccccccccCC----CCceEEEEEccc
Confidence 3578999999999999999999999977754333333344433332 44555666666665544 68999999987
Q ss_pred eeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeE
Q psy4579 118 AQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYL 197 (368)
Q Consensus 118 ~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l 197 (368)
++....+.+|.+.|+.++|+.+. ..+++|+.|.++++||-++... +|++.+..-...|. ++..+ +..|
T Consensus 91 Gkv~Rr~rgH~aqVNtV~fNees-SVv~SgsfD~s~r~wDCRS~s~-----ePiQildea~D~V~---Si~v~---~heI 158 (307)
T KOG0316|consen 91 GKVDRRFRGHLAQVNTVRFNEES-SVVASGSFDSSVRLWDCRSRSF-----EPIQILDEAKDGVS---SIDVA---EHEI 158 (307)
T ss_pred CeeeeecccccceeeEEEecCcc-eEEEeccccceeEEEEcccCCC-----CccchhhhhcCcee---EEEec---ccEE
Confidence 57778899999999999999998 9999999999999999887653 47888888888884 88875 6789
Q ss_pred EEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeeecccccCCCCccceEEEEeecCCcccccccccccCC
Q psy4579 198 LSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTD 277 (368)
Q Consensus 198 ~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~ 277 (368)
++||.||+++.||+|.+. ....+ ...+|+++.|++. + +.....+ -
T Consensus 159 vaGS~DGtvRtydiR~G~-------l~sDy--~g~pit~vs~s~d--------~-nc~La~~-----------------l 203 (307)
T KOG0316|consen 159 VAGSVDGTVRTYDIRKGT-------LSSDY--FGHPITSVSFSKD--------G-NCSLASS-----------------L 203 (307)
T ss_pred EeeccCCcEEEEEeecce-------eehhh--cCCcceeEEecCC--------C-CEEEEee-----------------c
Confidence 999999999999999983 22233 3458999999751 0 1111111 1
Q ss_pred CCCcccccCCCCceeeeeecCccccee--EEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeecccCc
Q psy4579 278 KGDFGGFGSVSGKIEIEIKINHEGEVN--RARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKE 355 (368)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~h~~~i~--~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~ 355 (368)
.+.+.+.|-.+|++....+ +|...=. .++++... ..+++||+||.|.+||+-. ...+..+..|...
T Consensus 204 ~stlrLlDk~tGklL~sYk-Ghkn~eykldc~l~qsd-thV~sgSEDG~Vy~wdLvd----------~~~~sk~~~~~~v 271 (307)
T KOG0316|consen 204 DSTLRLLDKETGKLLKSYK-GHKNMEYKLDCCLNQSD-THVFSGSEDGKVYFWDLVD----------ETQISKLSVVSTV 271 (307)
T ss_pred cceeeecccchhHHHHHhc-ccccceeeeeeeecccc-eeEEeccCCceEEEEEecc----------ceeeeeeccCCce
Confidence 1224455556677666665 8876543 34565555 5677999999999999964 3444456666666
Q ss_pred -eeeecceeeee
Q psy4579 356 -GLIEGTYNCYL 366 (368)
Q Consensus 356 -V~~l~w~p~~~ 366 (368)
|.+++++|.+.
T Consensus 272 ~v~dl~~hp~~~ 283 (307)
T KOG0316|consen 272 IVTDLSCHPTMD 283 (307)
T ss_pred eEEeeecccCcc
Confidence 78999999874
|
|
| >KOG1446|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-24 Score=177.49 Aligned_cols=268 Identities=15% Similarity=0.130 Sum_probs=186.5
Q ss_pred cccCceeeEecCCcccccCCCCccccccCcceeeeccccCCCCCcEE-EEEEecCCCccccccCCcccCCCCcccCCCCC
Q psy4579 39 LEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQNHLL-IASVQLPNEDAQFDASNYDTDKGGNVQLPNED 117 (368)
Q Consensus 39 ~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~ 117 (368)
...++.++.|+++|++|+++++|..+ ..|+...|.........-+ +..+.+..+...+..+.- ..|.+|+..++.
T Consensus 13 ~~~~i~sl~fs~~G~~litss~dDsl--~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sSt--k~d~tIryLsl~ 88 (311)
T KOG1446|consen 13 TNGKINSLDFSDDGLLLITSSEDDSL--RLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSST--KEDDTIRYLSLH 88 (311)
T ss_pred CCCceeEEEecCCCCEEEEecCCCeE--EEEEcCCCceeeEeecccccccEEEEecCCceEEEccC--CCCCceEEEEee
Confidence 45678999999999999999999888 6677777766655332222 444455443333332221 246788888875
Q ss_pred -eeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCe
Q psy4579 118 -AQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGY 196 (368)
Q Consensus 118 -~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~ 196 (368)
.+.+..+.+|.+.|++|+.+|-+ +.+++++.|++|++||++..++ ...+.....+ .++|.|+ +-+
T Consensus 89 dNkylRYF~GH~~~V~sL~~sP~~-d~FlS~S~D~tvrLWDlR~~~c-------qg~l~~~~~p-----i~AfDp~-GLi 154 (311)
T KOG1446|consen 89 DNKYLRYFPGHKKRVNSLSVSPKD-DTFLSSSLDKTVRLWDLRVKKC-------QGLLNLSGRP-----IAAFDPE-GLI 154 (311)
T ss_pred cCceEEEcCCCCceEEEEEecCCC-CeEEecccCCeEEeeEecCCCC-------ceEEecCCCc-----ceeECCC-CcE
Confidence 46677888999999999999998 9999999999999999997653 2333322222 6799998 889
Q ss_pred EEEeeCCCcEEEEECCCCCCCCccccceeeee---cccccEeEEEEeeecccccCCCCccceEEEEeecCCccccccccc
Q psy4579 197 LLSASDDHTICLWDINATPKENRVIDAKTIFT---GHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASN 273 (368)
Q Consensus 197 l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~---~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 273 (368)
+|++.....|+|||+|.-.+ .|..++. +.....+.+.|++. ++.+.+.
T Consensus 155 fA~~~~~~~IkLyD~Rs~dk-----gPF~tf~i~~~~~~ew~~l~FS~d-----------------------GK~iLls- 205 (311)
T KOG1446|consen 155 FALANGSELIKLYDLRSFDK-----GPFTTFSITDNDEAEWTDLEFSPD-----------------------GKSILLS- 205 (311)
T ss_pred EEEecCCCeEEEEEecccCC-----CCceeEccCCCCccceeeeEEcCC-----------------------CCEEEEE-
Confidence 99998888999999998754 2344443 23455677777651 1111110
Q ss_pred ccCCCCCcccccCCCCceeeeeecCcccce---eEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeee
Q psy4579 274 YDTDKGDFGGFGSVSGKIEIEIKINHEGEV---NRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLR 350 (368)
Q Consensus 274 ~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i---~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 350 (368)
...+.+.+.|..+|.....+. .+...- ....|.|+++ .+.+|+.||+|.+|+++. ..++..+.
T Consensus 206 --T~~s~~~~lDAf~G~~~~tfs-~~~~~~~~~~~a~ftPds~-Fvl~gs~dg~i~vw~~~t----------g~~v~~~~ 271 (311)
T KOG1446|consen 206 --TNASFIYLLDAFDGTVKSTFS-GYPNAGNLPLSATFTPDSK-FVLSGSDDGTIHVWNLET----------GKKVAVLR 271 (311)
T ss_pred --eCCCcEEEEEccCCcEeeeEe-eccCCCCcceeEEECCCCc-EEEEecCCCcEEEEEcCC----------CcEeeEec
Confidence 111223334444555555544 333322 6788999994 666999999999999975 56667788
Q ss_pred c-ccCceeeecceeeeec
Q psy4579 351 G-HQKEGLIEGTYNCYLQ 367 (368)
Q Consensus 351 g-h~~~V~~l~w~p~~~~ 367 (368)
| |..++.++.|+|+|.|
T Consensus 272 ~~~~~~~~~~~fnP~~~m 289 (311)
T KOG1446|consen 272 GPNGGPVSCVRFNPRYAM 289 (311)
T ss_pred CCCCCCccccccCCceee
Confidence 7 8999999999999965
|
|
| >KOG0285|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.7e-25 Score=183.79 Aligned_cols=193 Identities=21% Similarity=0.240 Sum_probs=162.7
Q ss_pred CCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCC
Q psy4579 114 PNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSL 193 (368)
Q Consensus 114 ~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~ 193 (368)
|...=+....+.+|.+=|.|+++.|.+ .+|++|+.|++++|||+.+++ ...++.||-..|+ .+++++.
T Consensus 137 WHapwKl~rVi~gHlgWVr~vavdP~n-~wf~tgs~DrtikIwDlatg~-------LkltltGhi~~vr---~vavS~r- 204 (460)
T KOG0285|consen 137 WHAPWKLYRVISGHLGWVRSVAVDPGN-EWFATGSADRTIKIWDLATGQ-------LKLTLTGHIETVR---GVAVSKR- 204 (460)
T ss_pred ccCcceehhhhhhccceEEEEeeCCCc-eeEEecCCCceeEEEEcccCe-------EEEeecchhheee---eeeeccc-
Confidence 444445556678899999999999997 999999999999999999985 5688999999998 9999998
Q ss_pred CCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee--ecccccCCCCccceEEEEeecCCccccccc
Q psy4579 194 NGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LILGTHTSDEQNHLLIASVQLPNEDAQFDA 271 (368)
Q Consensus 194 ~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 271 (368)
..++.+++.|+.|+.||++.. +.++.+.||-..|.+++.+| .++.+++.|...++|..+
T Consensus 205 HpYlFs~gedk~VKCwDLe~n-------kvIR~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiR------------ 265 (460)
T KOG0285|consen 205 HPYLFSAGEDKQVKCWDLEYN-------KVIRHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIR------------ 265 (460)
T ss_pred CceEEEecCCCeeEEEechhh-------hhHHHhccccceeEEEeccccceeEEecCCcceEEEeeec------------
Confidence 899999999999999999886 45788999999999999997 456777777666665443
Q ss_pred ccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeec
Q psy4579 272 SNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRG 351 (368)
Q Consensus 272 ~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~g 351 (368)
+...+..+. +|..+|.++.+.|..+.++ |||.|++|++||++. ......+..
T Consensus 266 ----------------tr~~V~~l~-GH~~~V~~V~~~~~dpqvi-t~S~D~tvrlWDl~a----------gkt~~tlt~ 317 (460)
T KOG0285|consen 266 ----------------TRASVHVLS-GHTNPVASVMCQPTDPQVI-TGSHDSTVRLWDLRA----------GKTMITLTH 317 (460)
T ss_pred ----------------ccceEEEec-CCCCcceeEEeecCCCceE-EecCCceEEEeeecc----------CceeEeeec
Confidence 333444454 9999999999999987666 999999999999986 455668889
Q ss_pred ccCceeeecceeee
Q psy4579 352 HQKEGLIEGTYNCY 365 (368)
Q Consensus 352 h~~~V~~l~w~p~~ 365 (368)
|...|.+++-+|.-
T Consensus 318 hkksvral~lhP~e 331 (460)
T KOG0285|consen 318 HKKSVRALCLHPKE 331 (460)
T ss_pred ccceeeEEecCCch
Confidence 99999999999864
|
|
| >KOG0265|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.2e-25 Score=177.34 Aligned_cols=219 Identities=15% Similarity=0.160 Sum_probs=170.1
Q ss_pred eeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEe
Q psy4579 121 DASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSA 200 (368)
Q Consensus 121 ~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~ 200 (368)
...+.+|++.|+.+.|+|+| ..||||+.|..|.+|++....+ -..++++|++.| +.+.|.++ ++.++++
T Consensus 40 ~m~l~gh~geI~~~~F~P~g-s~~aSgG~Dr~I~LWnv~gdce------N~~~lkgHsgAV---M~l~~~~d-~s~i~S~ 108 (338)
T KOG0265|consen 40 IMLLPGHKGEIYTIKFHPDG-SCFASGGSDRAIVLWNVYGDCE------NFWVLKGHSGAV---MELHGMRD-GSHILSC 108 (338)
T ss_pred hhhcCCCcceEEEEEECCCC-CeEeecCCcceEEEEecccccc------ceeeecccccee---EeeeeccC-CCEEEEe
Confidence 44567899999999999998 9999999999999999865422 357888999999 69999999 9999999
Q ss_pred eCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEe---eecccccCCCCccceEEEEee----cCCccccccccc
Q psy4579 201 SDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIH---RLILGTHTSDEQNHLLIASVQ----LPNEDAQFDASN 273 (368)
Q Consensus 201 s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~---~~~~~~~~~d~~~~~~~~~~~----~~~~~~~~~~~~ 273 (368)
|.|.+++.||++++ +..+.+++|...|+++... +.++.+++.|++.++|..+.. ...+..++....
T Consensus 109 gtDk~v~~wD~~tG-------~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~~kyqltAv~ 181 (338)
T KOG0265|consen 109 GTDKTVRGWDAETG-------KRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFENKYQLTAVG 181 (338)
T ss_pred cCCceEEEEecccc-------eeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccchhhccccceeEEEEE
Confidence 99999999999999 4577889999999988854 478999999999999977621 111111121222
Q ss_pred ccC---------CCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCC
Q psy4579 274 YDT---------DKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECH 344 (368)
Q Consensus 274 ~d~---------~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~ 344 (368)
|.. -++.+..||++.+.....+. ||.++|+.+..+|+|..++ +-+.|.++++||++.... ..+
T Consensus 182 f~d~s~qv~sggIdn~ikvWd~r~~d~~~~ls-Gh~DtIt~lsls~~gs~ll-snsMd~tvrvwd~rp~~p------~~R 253 (338)
T KOG0265|consen 182 FKDTSDQVISGGIDNDIKVWDLRKNDGLYTLS-GHADTITGLSLSRYGSFLL-SNSMDNTVRVWDVRPFAP------SQR 253 (338)
T ss_pred ecccccceeeccccCceeeeccccCcceEEee-cccCceeeEEeccCCCccc-cccccceEEEEEecccCC------CCc
Confidence 211 12346789998888888777 9999999999999996555 889999999999985332 122
Q ss_pred CceeeecccC----ceeeecceeee
Q psy4579 345 PDLRLRGHQK----EGLIEGTYNCY 365 (368)
Q Consensus 345 ~~~~~~gh~~----~V~~l~w~p~~ 365 (368)
.+..+.||.- ....++|+|+.
T Consensus 254 ~v~if~g~~hnfeknlL~cswsp~~ 278 (338)
T KOG0265|consen 254 CVKIFQGHIHNFEKNLLKCSWSPNG 278 (338)
T ss_pred eEEEeecchhhhhhhcceeeccCCC
Confidence 3556777533 34578999975
|
|
| >KOG0318|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.5e-24 Score=187.58 Aligned_cols=273 Identities=14% Similarity=0.133 Sum_probs=207.3
Q ss_pred cccCceeeEecCCcccccCCCCccccccCcceeeeccccC--CCCCc-EEEEEEecCCCccccccCCcccCCCCcccCCC
Q psy4579 39 LEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTS--DEQNH-LLIASVQLPNEDAQFDASNYDTDKGGNVQLPN 115 (368)
Q Consensus 39 ~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~ 115 (368)
+..|+...+|+|.|.++|+|...|.++||.+--. +|.- +.+-. -.|..+.|..+..++.+.+-.-++-|-+.+||
T Consensus 58 H~~~vtVAkySPsG~yiASGD~sG~vRIWdtt~~--~hiLKnef~v~aG~I~Di~Wd~ds~RI~avGEGrerfg~~F~~D 135 (603)
T KOG0318|consen 58 HAHQVTVAKYSPSGFYIASGDVSGKVRIWDTTQK--EHILKNEFQVLAGPIKDISWDFDSKRIAAVGEGRERFGHVFLWD 135 (603)
T ss_pred ccceeEEEEeCCCceEEeecCCcCcEEEEeccCc--ceeeeeeeeecccccccceeCCCCcEEEEEecCccceeEEEEec
Confidence 4778899999999999999999999988865322 2222 22221 24778889888889888874444456677787
Q ss_pred CCeeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCC
Q psy4579 116 EDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNG 195 (368)
Q Consensus 116 ~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~ 195 (368)
.. ..+-.+.+|.+.|++++|-|..|-.++||+.|++|-+|+-.-.+ ....++.|+.-|. ++.|+|+ +.
T Consensus 136 SG-~SvGei~GhSr~ins~~~KpsRPfRi~T~sdDn~v~ffeGPPFK-------Fk~s~r~HskFV~---~VRysPD-G~ 203 (603)
T KOG0318|consen 136 SG-NSVGEITGHSRRINSVDFKPSRPFRIATGSDDNTVAFFEGPPFK-------FKSSFREHSKFVN---CVRYSPD-GS 203 (603)
T ss_pred CC-CccceeeccceeEeeeeccCCCceEEEeccCCCeEEEeeCCCee-------eeeccccccccee---eEEECCC-CC
Confidence 64 45667789999999999999999999999999999999754332 3467788999896 9999999 99
Q ss_pred eEEEeeCCCcEEEEECCCCCCCCccccceeeee---cccccEeEEEEee--ecccccCCCCccceEEEEee-------cC
Q psy4579 196 YLLSASDDHTICLWDINATPKENRVIDAKTIFT---GHTAVVEDYSIHR--LILGTHTSDEQNHLLIASVQ-------LP 263 (368)
Q Consensus 196 ~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~---~~~~~v~~v~~~~--~~~~~~~~d~~~~~~~~~~~-------~~ 263 (368)
+|+|.+.||+|.+||=.+++. +..+. +|...|.+++|+| .-+.+.+.|++.++|..+.. +.
T Consensus 204 ~Fat~gsDgki~iyDGktge~-------vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdVs~~slv~t~~~~ 276 (603)
T KOG0318|consen 204 RFATAGSDGKIYIYDGKTGEK-------VGELEDSDAHKGSIFALSWSPDSTQFLTVSADKTIKIWDVSTNSLVSTWPMG 276 (603)
T ss_pred eEEEecCCccEEEEcCCCccE-------EEEecCCCCccccEEEEEECCCCceEEEecCCceEEEEEeeccceEEEeecC
Confidence 999999999999999888843 44555 7999999999997 57788899999999965432 11
Q ss_pred Cc-cccccccccc-------CCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCC
Q psy4579 264 NE-DAQFDASNYD-------TDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHP 334 (368)
Q Consensus 264 ~~-~~~~~~~~~d-------~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~ 334 (368)
.. +.+..-+.|. ...|.+..++...++.+..+. +|...|+++..+|++ ..|.|||.||.|.-|+.....
T Consensus 277 ~~v~dqqvG~lWqkd~lItVSl~G~in~ln~~d~~~~~~i~-GHnK~ITaLtv~~d~-~~i~SgsyDG~I~~W~~~~g~ 353 (603)
T KOG0318|consen 277 STVEDQQVGCLWQKDHLITVSLSGTINYLNPSDPSVLKVIS-GHNKSITALTVSPDG-KTIYSGSYDGHINSWDSGSGT 353 (603)
T ss_pred CchhceEEEEEEeCCeEEEEEcCcEEEEecccCCChhheec-ccccceeEEEEcCCC-CEEEeeccCceEEEEecCCcc
Confidence 11 1111112221 233455666666677444454 999999999999999 566699999999999997643
|
|
| >KOG0645|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.1e-24 Score=172.34 Aligned_cols=220 Identities=17% Similarity=0.238 Sum_probs=169.1
Q ss_pred EEEEEecCCCccccccCCcccCCCCcccCCCCCe-e--eeec--cccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCC
Q psy4579 85 LIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDA-Q--FDAS--NYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDIN 159 (368)
Q Consensus 85 ~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~-~--~~~~--~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~ 159 (368)
.+..+.+.+....+.++. +.|..|++|+... . .... -.+|++.|.+++|+|.| ++||+||.|.++.||.-.
T Consensus 16 r~W~~awhp~~g~ilAsc---g~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g-~~La~aSFD~t~~Iw~k~ 91 (312)
T KOG0645|consen 16 RVWSVAWHPGKGVILASC---GTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHG-RYLASASFDATVVIWKKE 91 (312)
T ss_pred cEEEEEeccCCceEEEee---cCCceEEEEecCCCCcEEEEEeccccchheeeeeeecCCC-cEEEEeeccceEEEeecC
Confidence 355566655433334333 5689999999873 1 1221 23699999999999999 999999999999999766
Q ss_pred CCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEE
Q psy4579 160 ATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSI 239 (368)
Q Consensus 160 ~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~ 239 (368)
.+. +++..++.||..+|. +++|+++ +++||++|.|++|-||.+..... +++...++.|+..|.-+.|
T Consensus 92 ~~e-----fecv~~lEGHEnEVK---~Vaws~s-G~~LATCSRDKSVWiWe~deddE----fec~aVL~~HtqDVK~V~W 158 (312)
T KOG0645|consen 92 DGE-----FECVATLEGHENEVK---CVAWSAS-GNYLATCSRDKSVWIWEIDEDDE----FECIAVLQEHTQDVKHVIW 158 (312)
T ss_pred CCc-----eeEEeeeecccccee---EEEEcCC-CCEEEEeeCCCeEEEEEecCCCc----EEEEeeeccccccccEEEE
Confidence 443 457889999999997 9999999 99999999999999999875432 4778899999999999999
Q ss_pred ee--ecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEE
Q psy4579 240 HR--LILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIA 317 (368)
Q Consensus 240 ~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~la 317 (368)
|| -++.+++-|.++++|--. | .. .=.+..++. +|...|.+++|+|.| ..|+
T Consensus 159 HPt~dlL~S~SYDnTIk~~~~~---------------~--dd--------dW~c~~tl~-g~~~TVW~~~F~~~G-~rl~ 211 (312)
T KOG0645|consen 159 HPTEDLLFSCSYDNTIKVYRDE---------------D--DD--------DWECVQTLD-GHENTVWSLAFDNIG-SRLV 211 (312)
T ss_pred cCCcceeEEeccCCeEEEEeec---------------C--CC--------CeeEEEEec-CccceEEEEEecCCC-ceEE
Confidence 98 688888888777776321 0 00 012233443 899999999999999 6777
Q ss_pred EecCCCeEEEEECCCCCCCCCCCCCCCCceeeecccCceeeecce
Q psy4579 318 TKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTY 362 (368)
Q Consensus 318 sgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~ 362 (368)
+++.|++++||-+.. .. -.-|+.++|.++|.
T Consensus 212 s~sdD~tv~Iw~~~~----------~~----~~~~sr~~Y~v~W~ 242 (312)
T KOG0645|consen 212 SCSDDGTVSIWRLYT----------DL----SGMHSRALYDVPWD 242 (312)
T ss_pred EecCCcceEeeeecc----------Cc----chhcccceEeeeec
Confidence 999999999999752 11 12477889999887
|
|
| >KOG0278|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.5e-25 Score=176.90 Aligned_cols=269 Identities=17% Similarity=0.235 Sum_probs=185.9
Q ss_pred ecccccccCceeeEec---CCcccccCCCCccccccCcceeeeccccCC-CCCcEEEEEEecCCCccccccCCcccCCCC
Q psy4579 34 VMTHALEWPSLTAQWL---PDVTSVQLPNEDAQFDASNYDTDKGTHTSD-EQNHLLIASVQLPNEDAQFDASNYDTDKGG 109 (368)
Q Consensus 34 ~~~~~~~~~~~~~~~~---p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g 109 (368)
+.++-+.-||..++|+ |+|-+|++++.|+.--+++= .+|.-..+ +...-.+.+..+..+..+ .++. ++|-
T Consensus 8 l~c~ghtrpvvdl~~s~itp~g~flisa~kd~~pmlr~g--~tgdwigtfeghkgavw~~~l~~na~~-aasa---aadf 81 (334)
T KOG0278|consen 8 LTCHGHTRPVVDLAFSPITPDGYFLISASKDGKPMLRNG--DTGDWIGTFEGHKGAVWSATLNKNATR-AASA---AADF 81 (334)
T ss_pred eEEcCCCcceeEEeccCCCCCceEEEEeccCCCchhccC--CCCCcEEeeeccCcceeeeecCchhhh-hhhh---cccc
Confidence 3456677899999996 78999999999987543322 22222222 222234555555433222 2222 4577
Q ss_pred cccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEE
Q psy4579 110 NVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSW 189 (368)
Q Consensus 110 ~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~ 189 (368)
+-++||.-..-..-.+.|+.-|.+++|+.+. ++|++|+.++.+||||++..+. +...+.+|++.|+ .+-|
T Consensus 82 takvw~a~tgdelhsf~hkhivk~~af~~ds-~~lltgg~ekllrvfdln~p~A------pp~E~~ghtg~Ir---~v~w 151 (334)
T KOG0278|consen 82 TAKVWDAVTGDELHSFEHKHIVKAVAFSQDS-NYLLTGGQEKLLRVFDLNRPKA------PPKEISGHTGGIR---TVLW 151 (334)
T ss_pred hhhhhhhhhhhhhhhhhhhheeeeEEecccc-hhhhccchHHHhhhhhccCCCC------CchhhcCCCCcce---eEEE
Confidence 8899998766666677899999999999998 9999999999999999988754 5678999999998 9999
Q ss_pred eCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee--ecccccCCCCccceEE----------
Q psy4579 190 NPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LILGTHTSDEQNHLLI---------- 257 (368)
Q Consensus 190 ~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~d~~~~~~~---------- 257 (368)
+.. .+.|+|++.|++|++||.+++.. +.++. ...+|+++..++ .++.+ ...+.+.+|.
T Consensus 152 c~e-D~~iLSSadd~tVRLWD~rTgt~-------v~sL~-~~s~VtSlEvs~dG~ilTi-a~gssV~Fwdaksf~~lKs~ 221 (334)
T KOG0278|consen 152 CHE-DKCILSSADDKTVRLWDHRTGTE-------VQSLE-FNSPVTSLEVSQDGRILTI-AYGSSVKFWDAKSFGLLKSY 221 (334)
T ss_pred ecc-CceEEeeccCCceEEEEeccCcE-------EEEEe-cCCCCcceeeccCCCEEEE-ecCceeEEeccccccceeec
Confidence 988 78888989999999999999853 23332 334556666553 11111 1112233331
Q ss_pred ------EEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECC
Q psy4579 258 ------ASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYT 331 (368)
Q Consensus 258 ------~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~ 331 (368)
.+.++.+....+.+ ..+...+..+|..++..+.....+|.++|.|+.|+|+| .+.|+||+||+|+||...
T Consensus 222 k~P~nV~SASL~P~k~~fVa---Gged~~~~kfDy~TgeEi~~~nkgh~gpVhcVrFSPdG-E~yAsGSEDGTirlWQt~ 297 (334)
T KOG0278|consen 222 KMPCNVESASLHPKKEFFVA---GGEDFKVYKFDYNTGEEIGSYNKGHFGPVHCVRFSPDG-ELYASGSEDGTIRLWQTT 297 (334)
T ss_pred cCccccccccccCCCceEEe---cCcceEEEEEeccCCceeeecccCCCCceEEEEECCCC-ceeeccCCCceEEEEEec
Confidence 22223333322221 12334456677778877766545999999999999999 689999999999999986
Q ss_pred C
Q psy4579 332 K 332 (368)
Q Consensus 332 ~ 332 (368)
.
T Consensus 298 ~ 298 (334)
T KOG0278|consen 298 P 298 (334)
T ss_pred C
Confidence 4
|
|
| >KOG0292|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.3e-25 Score=201.54 Aligned_cols=226 Identities=20% Similarity=0.258 Sum_probs=180.2
Q ss_pred CCcccCCCCC-eeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceeccee
Q psy4579 108 GGNVQLPNED-AQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYG 186 (368)
Q Consensus 108 ~g~i~i~~~~-~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 186 (368)
.|.|++||.. +..+..+.+|+++|..++|+|.+ .++++|+.|..|++|+..+.+ ++.++.||-+.|+ .
T Consensus 30 sG~IQlWDYRM~tli~rFdeHdGpVRgv~FH~~q-plFVSGGDDykIkVWnYk~rr-------clftL~GHlDYVR---t 98 (1202)
T KOG0292|consen 30 SGVIQLWDYRMGTLIDRFDEHDGPVRGVDFHPTQ-PLFVSGGDDYKIKVWNYKTRR-------CLFTLLGHLDYVR---T 98 (1202)
T ss_pred CceeeeehhhhhhHHhhhhccCCccceeeecCCC-CeEEecCCccEEEEEecccce-------ehhhhccccceeE---E
Confidence 7899999975 55667788999999999999998 899999999999999998875 6788999999998 9
Q ss_pred eEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee--ecccccCCCCccceEEEEeecCC
Q psy4579 187 LSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LILGTHTSDEQNHLLIASVQLPN 264 (368)
Q Consensus 187 i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~d~~~~~~~~~~~~~~ 264 (368)
+.|++. ...++|+|.|.+|+||+..+. .++..+.||...|.|..|+| .++.+++-|.++++|..+.--..
T Consensus 99 ~~FHhe-yPWIlSASDDQTIrIWNwqsr-------~~iavltGHnHYVMcAqFhptEDlIVSaSLDQTVRVWDisGLRkk 170 (1202)
T KOG0292|consen 99 VFFHHE-YPWILSASDDQTIRIWNWQSR-------KCIAVLTGHNHYVMCAQFHPTEDLIVSASLDQTVRVWDISGLRKK 170 (1202)
T ss_pred eeccCC-CceEEEccCCCeEEEEeccCC-------ceEEEEecCceEEEeeccCCccceEEEecccceEEEEeecchhcc
Confidence 999999 999999999999999999887 67899999999999999998 68889999999999987753222
Q ss_pred ccccccccccc-CCCCCc---ccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCC
Q psy4579 265 EDAQFDASNYD-TDKGDF---GGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPN 340 (368)
Q Consensus 265 ~~~~~~~~~~d-~~~~~~---~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~ 340 (368)
....- ..+ ...+.- .+++.. .-++.....||+..|+-++|+|.-+ +|+||+.|..|++|.++..+
T Consensus 171 ~~~pg---~~e~~~~~~~~~~dLfg~~-DaVVK~VLEGHDRGVNwaAfhpTlp-liVSG~DDRqVKlWrmnetK------ 239 (1202)
T KOG0292|consen 171 NKAPG---SLEDQMRGQQGNSDLFGQT-DAVVKHVLEGHDRGVNWAAFHPTLP-LIVSGADDRQVKLWRMNETK------ 239 (1202)
T ss_pred CCCCC---CchhhhhccccchhhcCCc-CeeeeeeecccccccceEEecCCcc-eEEecCCcceeeEEEecccc------
Confidence 11111 111 011111 111111 1223334459999999999999995 88899999999999997522
Q ss_pred CCCCCceeeecccCceeeecceeee
Q psy4579 341 GECHPDLRLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 341 ~~~~~~~~~~gh~~~V~~l~w~p~~ 365 (368)
--.+-+..||.+.|.++-|+|+.
T Consensus 240 --aWEvDtcrgH~nnVssvlfhp~q 262 (1202)
T KOG0292|consen 240 --AWEVDTCRGHYNNVSSVLFHPHQ 262 (1202)
T ss_pred --ceeehhhhcccCCcceEEecCcc
Confidence 33445678999999999999965
|
|
| >KOG0305|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.9e-25 Score=195.65 Aligned_cols=259 Identities=19% Similarity=0.277 Sum_probs=188.3
Q ss_pred hhhhhhhcCcchheeecccccccCceeeEecCCcccccCCCCccccccCcceeeeccccCCCCCcEEEEEEecCCCcccc
Q psy4579 19 EYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNEDAQF 98 (368)
Q Consensus 19 ~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 98 (368)
..+.|+..+......+..+ +-.+.++.|+|+|++|++|..+|.|.+|+-.....+..........|.++.|-. ..
T Consensus 198 ~vylW~~~s~~v~~l~~~~--~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k~~~~~~~~h~~rvg~laW~~---~~ 272 (484)
T KOG0305|consen 198 SVYLWSASSGSVTELCSFG--EELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQKKTRTLRGSHASRVGSLAWNS---SV 272 (484)
T ss_pred eEEEEecCCCceEEeEecC--CCceEEEEECCCCCEEEEeecCCeEEEEehhhccccccccCCcCceeEEEeccC---ce
Confidence 4455665555433333333 667899999999999999999999988865555444444443456688888862 23
Q ss_pred ccCCcccCCCCcccCCCCCe--eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeec
Q psy4579 99 DASNYDTDKGGNVQLPNEDA--QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTG 176 (368)
Q Consensus 99 ~~~~~~~~~~g~i~i~~~~~--~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~ 176 (368)
..++ ..+|.|..++... .....+.+|...|+.++|++++ .+||+|+.|+.+.|||..... +...+..
T Consensus 273 lssG---sr~~~I~~~dvR~~~~~~~~~~~H~qeVCgLkws~d~-~~lASGgnDN~~~Iwd~~~~~-------p~~~~~~ 341 (484)
T KOG0305|consen 273 LSSG---SRDGKILNHDVRISQHVVSTLQGHRQEVCGLKWSPDG-NQLASGGNDNVVFIWDGLSPE-------PKFTFTE 341 (484)
T ss_pred EEEe---cCCCcEEEEEEecchhhhhhhhcccceeeeeEECCCC-CeeccCCCccceEeccCCCcc-------ccEEEec
Confidence 3333 4689999988753 2222478899999999999999 999999999999999995442 6788999
Q ss_pred cccceecceeeEEeCCCCCeEEEe--eCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeeec--ccccCCCCc
Q psy4579 177 HTAVVEVRYGLSWNPSLNGYLLSA--SDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLI--LGTHTSDEQ 252 (368)
Q Consensus 177 h~~~v~~~~~i~~~p~~~~~l~s~--s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~--~~~~~~d~~ 252 (368)
|...|. +++|+|-..++||+| +.|+.|++||..++.. +.... ....|..+.|++.. +.+..+...
T Consensus 342 H~aAVK---A~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~-------i~~vd-tgsQVcsL~Wsk~~kEi~sthG~s~ 410 (484)
T KOG0305|consen 342 HTAAVK---ALAWCPWQSGLLATGGGSADRCIKFWNTNTGAR-------IDSVD-TGSQVCSLIWSKKYKELLSTHGYSE 410 (484)
T ss_pred cceeee---EeeeCCCccCceEEcCCCcccEEEEEEcCCCcE-------ecccc-cCCceeeEEEcCCCCEEEEecCCCC
Confidence 999996 999999889999998 4799999999998742 23222 45678999998632 222222222
Q ss_pred cceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCC
Q psy4579 253 NHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
.. +.+|...+.+....+. +|...|..++++|+| ..+++|+.|.++++|++-.
T Consensus 411 n~--------------------------i~lw~~ps~~~~~~l~-gH~~RVl~la~SPdg-~~i~t~a~DETlrfw~~f~ 462 (484)
T KOG0305|consen 411 NQ--------------------------ITLWKYPSMKLVAELL-GHTSRVLYLALSPDG-ETIVTGAADETLRFWNLFD 462 (484)
T ss_pred Cc--------------------------EEEEeccccceeeeec-CCcceeEEEEECCCC-CEEEEecccCcEEeccccC
Confidence 22 2223333334444454 999999999999999 5777999999999999864
|
|
| >KOG0293|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.3e-24 Score=182.90 Aligned_cols=261 Identities=17% Similarity=0.213 Sum_probs=185.3
Q ss_pred eeeEecCCcccccCCCCccccccCcceeeeccc-cCC-CCCcEEEEEEecCCCccccccCCcccCCCCcccCCCCCeeee
Q psy4579 44 LTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTH-TSD-EQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQFD 121 (368)
Q Consensus 44 ~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~ 121 (368)
-=++|+++|++||+++.|.+.++|......... ..+ ......|.-+.|++++..+.+.+++ ..+.+||.++...
T Consensus 228 Wfl~FS~nGkyLAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~----e~~~lwDv~tgd~ 303 (519)
T KOG0293|consen 228 WFLQFSHNGKYLASASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGFD----EVLSLWDVDTGDL 303 (519)
T ss_pred EEEEEcCCCeeEeeccCCceEEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecCch----HheeeccCCcchh
Confidence 347899999999999999999877543332211 112 2223457778898888777776643 4599999988766
Q ss_pred eccccCC--CCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeecccc-ceecceeeEEeCCCCCeEE
Q psy4579 122 ASNYDTD--KGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTA-VVEVRYGLSWNPSLNGYLL 198 (368)
Q Consensus 122 ~~~~~h~--~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~-~v~~~~~i~~~p~~~~~l~ 198 (368)
...+++. ..+.+++|.||| ..+++|+.|+++..||++.. ......+-.. .| ++++..+| +.+++
T Consensus 304 ~~~y~~~~~~S~~sc~W~pDg-~~~V~Gs~dr~i~~wdlDgn--------~~~~W~gvr~~~v---~dlait~D-gk~vl 370 (519)
T KOG0293|consen 304 RHLYPSGLGFSVSSCAWCPDG-FRFVTGSPDRTIIMWDLDGN--------ILGNWEGVRDPKV---HDLAITYD-GKYVL 370 (519)
T ss_pred hhhcccCcCCCcceeEEccCC-ceeEecCCCCcEEEecCCcc--------hhhccccccccee---EEEEEcCC-CcEEE
Confidence 6666655 789999999999 89999999999999999865 2344444432 34 59999999 88999
Q ss_pred EeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee--ecccccCCCCccceE-------------------E
Q psy4579 199 SASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LILGTHTSDEQNHLL-------------------I 257 (368)
Q Consensus 199 s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~d~~~~~~-------------------~ 257 (368)
+...|..|++++.++.... . +-....+|++++.+. .++...-.+..+++| +
T Consensus 371 ~v~~d~~i~l~~~e~~~dr-------~-lise~~~its~~iS~d~k~~LvnL~~qei~LWDl~e~~lv~kY~Ghkq~~fi 442 (519)
T KOG0293|consen 371 LVTVDKKIRLYNREARVDR-------G-LISEEQPITSFSISKDGKLALVNLQDQEIHLWDLEENKLVRKYFGHKQGHFI 442 (519)
T ss_pred EEecccceeeechhhhhhh-------c-cccccCceeEEEEcCCCcEEEEEcccCeeEEeecchhhHHHHhhcccccceE
Confidence 9999999999998765221 1 112334455555542 111111112223333 3
Q ss_pred EEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCC
Q psy4579 258 ASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 258 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
...+|......+...+ .+.+.+++|...+|+++..+. ||...|+|++|+|..+..+||||.||+||||....
T Consensus 443 IrSCFgg~~~~fiaSG--SED~kvyIWhr~sgkll~~Ls-GHs~~vNcVswNP~~p~m~ASasDDgtIRIWg~~~ 514 (519)
T KOG0293|consen 443 IRSCFGGGNDKFIASG--SEDSKVYIWHRISGKLLAVLS-GHSKTVNCVSWNPADPEMFASASDDGTIRIWGPSD 514 (519)
T ss_pred EEeccCCCCcceEEec--CCCceEEEEEccCCceeEeec-CCcceeeEEecCCCCHHHhhccCCCCeEEEecCCc
Confidence 4444544444444333 456678999999999988887 99999999999999999999999999999999864
|
|
| >KOG0269|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.3e-25 Score=198.37 Aligned_cols=266 Identities=17% Similarity=0.225 Sum_probs=195.8
Q ss_pred cccCceeeEecCCcccccCCCCccccccCcceeeecccc-------CCCCCc-EEEEEEecCCCccccccCCcccCCCCc
Q psy4579 39 LEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHT-------SDEQNH-LLIASVQLPNEDAQFDASNYDTDKGGN 110 (368)
Q Consensus 39 ~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~g~ 110 (368)
++-+...+.-.++...+++++..= ...|.+.-.... ...|+. ...+.+.|..-...+.+ ..+.+|.
T Consensus 38 ~k~~~nAIs~nr~~~qiv~AGrs~---lklyai~~~~~~~~~~~~~k~kqn~~~S~~DVkW~~~~~NlIA---T~s~nG~ 111 (839)
T KOG0269|consen 38 LKAKANAISVNRDINQIVVAGRSL---LKLYAINPNDFSEKCNHRFKTKQNKFYSAADVKWGQLYSNLIA---TCSTNGV 111 (839)
T ss_pred cccccceEeecCCcceeEEecccc---eeeEeeCcccCCcceeeecccccceeeehhhcccccchhhhhe---eecCCCc
Confidence 444555566668877777765541 122222211111 112332 23455555432222222 2356899
Q ss_pred ccCCCCCe----eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceeccee
Q psy4579 111 VQLPNEDA----QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYG 186 (368)
Q Consensus 111 i~i~~~~~----~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 186 (368)
|.+||+.. +....+..|.+.+++++|++..+++|++||.||+|++||++..+ ...++.+....|+ .
T Consensus 112 i~vWdlnk~~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~-------S~~t~~~nSESiR---D 181 (839)
T KOG0269|consen 112 ISVWDLNKSIRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKK-------SKSTFRSNSESIR---D 181 (839)
T ss_pred EEEEecCccccchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeeccc-------ccccccccchhhh---c
Confidence 99999875 22335677999999999999999999999999999999998765 3577888888898 9
Q ss_pred eEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee--ecccccCCCCccceEEEEeecCC
Q psy4579 187 LSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LILGTHTSDEQNHLLIASVQLPN 264 (368)
Q Consensus 187 i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~d~~~~~~~~~~~~~~ 264 (368)
++|+|..++.|+++.+.|.+++||+|... ++...+.+|.++|.|+.|+| ..+++|+.|+++++|.+..
T Consensus 182 V~fsp~~~~~F~s~~dsG~lqlWDlRqp~------r~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd~t~---- 251 (839)
T KOG0269|consen 182 VKFSPGYGNKFASIHDSGYLQLWDLRQPD------RCEKKLTAHNGPVLCLNWHPNREWLATGGRDKMVKIWDMTD---- 251 (839)
T ss_pred eeeccCCCceEEEecCCceEEEeeccCch------hHHHHhhcccCceEEEeecCCCceeeecCCCccEEEEeccC----
Confidence 99999889999999999999999999875 56677889999999999997 5788888888888886642
Q ss_pred cccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecC--CCeEEEEECCCCCCCCCCCCC
Q psy4579 265 EDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTP--SSDVLVFDYTKHPSKPDPNGE 342 (368)
Q Consensus 265 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~--Dg~i~iwd~~~~~~~~~~~~~ 342 (368)
++......+....+|.+++|-|..++.|||++. |-.|+|||++..
T Consensus 252 ------------------------~~~~~~~tInTiapv~rVkWRP~~~~hLAtcsmv~dtsV~VWDvrRP--------- 298 (839)
T KOG0269|consen 252 ------------------------SRAKPKHTINTIAPVGRVKWRPARSYHLATCSMVVDTSVHVWDVRRP--------- 298 (839)
T ss_pred ------------------------CCccceeEEeecceeeeeeeccCccchhhhhhccccceEEEEeeccc---------
Confidence 111111112345789999999999899999864 788999999863
Q ss_pred CCCceeeecccCceeeeccee
Q psy4579 343 CHPDLRLRGHQKEGLIEGTYN 363 (368)
Q Consensus 343 ~~~~~~~~gh~~~V~~l~w~p 363 (368)
..|..++..|++.++.++|-.
T Consensus 299 YIP~~t~~eH~~~vt~i~W~~ 319 (839)
T KOG0269|consen 299 YIPYATFLEHTDSVTGIAWDS 319 (839)
T ss_pred cccceeeeccCccccceeccC
Confidence 467778899999999999964
|
|
| >PTZ00421 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.2e-23 Score=191.28 Aligned_cols=221 Identities=14% Similarity=0.153 Sum_probs=157.2
Q ss_pred ccccCCCCceeeEecC-CCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEee
Q psy4579 123 SNYDTDKGGYGLSWNP-SLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSAS 201 (368)
Q Consensus 123 ~~~~h~~~v~~l~~sp-~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s 201 (368)
.+.+|.+.|++++|+| ++ ++||+|+.||+|++||+...........++..+.+|...|. +++|+|+..++|++|+
T Consensus 70 ~l~GH~~~V~~v~fsP~d~-~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~---~l~f~P~~~~iLaSgs 145 (493)
T PTZ00421 70 ILLGQEGPIIDVAFNPFDP-QKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVG---IVSFHPSAMNVLASAG 145 (493)
T ss_pred eEeCCCCCEEEEEEcCCCC-CEEEEEeCCCEEEEEecCCCccccccCcceEEecCCCCcEE---EEEeCcCCCCEEEEEe
Confidence 3678999999999999 65 89999999999999999765322222235678899999996 9999998567999999
Q ss_pred CCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee--ecccccCCCCccceEEEEee-----c--C---------
Q psy4579 202 DDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LILGTHTSDEQNHLLIASVQ-----L--P--------- 263 (368)
Q Consensus 202 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~d~~~~~~~~~~~-----~--~--------- 263 (368)
.|++|+|||++++ .....+.+|...|.+++|++ .++++++.|+.+++|..... + .
T Consensus 146 ~DgtVrIWDl~tg-------~~~~~l~~h~~~V~sla~spdG~lLatgs~Dg~IrIwD~rsg~~v~tl~~H~~~~~~~~~ 218 (493)
T PTZ00421 146 ADMVVNVWDVERG-------KAVEVIKCHSDQITSLEWNLDGSLLCTTSKDKKLNIIDPRDGTIVSSVEAHASAKSQRCL 218 (493)
T ss_pred CCCEEEEEECCCC-------eEEEEEcCCCCceEEEEEECCCCEEEEecCCCEEEEEECCCCcEEEEEecCCCCcceEEE
Confidence 9999999999886 34667888999999999986 57888888999888854311 1 0
Q ss_pred --Cccccccccccc-CCCCCcccccCCCCceeeeeec-CcccceeEEEEeCCCCcEEEEec-CCCeEEEEECCCCCCCCC
Q psy4579 264 --NEDAQFDASNYD-TDKGDFGGFGSVSGKIEIEIKI-NHEGEVNRARYMPQNPCVIATKT-PSSDVLVFDYTKHPSKPD 338 (368)
Q Consensus 264 --~~~~~~~~~~~d-~~~~~~~~~~~~~~~~~~~~~~-~h~~~i~~~~~~p~~~~~lasgs-~Dg~i~iwd~~~~~~~~~ 338 (368)
.....+....++ ...+.+.+||.+.......... .+...+....|+|++. +|++|+ .|++|++||++..
T Consensus 219 w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~~p~~~~~~d~~~~~~~~~~d~d~~-~L~lggkgDg~Iriwdl~~~----- 292 (493)
T PTZ00421 219 WAKRKDLIITLGCSKSQQRQIMLWDTRKMASPYSTVDLDQSSALFIPFFDEDTN-LLYIGSKGEGNIRCFELMNE----- 292 (493)
T ss_pred EcCCCCeEEEEecCCCCCCeEEEEeCCCCCCceeEeccCCCCceEEEEEcCCCC-EEEEEEeCCCeEEEEEeeCC-----
Confidence 011112222222 2345688888876654443322 2344566678999994 555655 6999999999752
Q ss_pred CCCCCCCceee-ecccCceeeecceeee
Q psy4579 339 PNGECHPDLRL-RGHQKEGLIEGTYNCY 365 (368)
Q Consensus 339 ~~~~~~~~~~~-~gh~~~V~~l~w~p~~ 365 (368)
.+...+ ..+..++.+++|.|..
T Consensus 293 -----~~~~~~~~~s~~~~~g~~~~pk~ 315 (493)
T PTZ00421 293 -----RLTFCSSYSSVEPHKGLCMMPKW 315 (493)
T ss_pred -----ceEEEeeccCCCCCcceEecccc
Confidence 222222 2345567778877764
|
|
| >KOG0302|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.7e-24 Score=177.62 Aligned_cols=221 Identities=26% Similarity=0.362 Sum_probs=166.6
Q ss_pred CCCCcccCCCCCe-----------------eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCccc
Q psy4579 106 DKGGNVQLPNEDA-----------------QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVI 168 (368)
Q Consensus 106 ~~~g~i~i~~~~~-----------------~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~ 168 (368)
+..|.|+||++.. +.+.++.+|+..-++|+|||.....|+||.--+.|++|...++.=..
T Consensus 172 se~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~ghk~EGy~LdWSp~~~g~LlsGDc~~~I~lw~~~~g~W~v--- 248 (440)
T KOG0302|consen 172 SENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFNGHKGEGYGLDWSPIKTGRLLSGDCVKGIHLWEPSTGSWKV--- 248 (440)
T ss_pred cccCcEEEEEchhhhhhhcCccccccccccCceEEecccCccceeeecccccccccccCccccceEeeeeccCceee---
Confidence 4578999998531 23456678999999999999654678999888999999988753110
Q ss_pred ccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee--ecccc
Q psy4579 169 DAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LILGT 246 (368)
Q Consensus 169 ~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~ 246 (368)
-..-+.+|+..|. .|+|+|...+.|+|||.||+|+|||+|.+++.. -...+.|...|+.++|+. .++++
T Consensus 249 -d~~Pf~gH~~SVE---DLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~-----~~~~kAh~sDVNVISWnr~~~lLas 319 (440)
T KOG0302|consen 249 -DQRPFTGHTKSVE---DLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKA-----AVSTKAHNSDVNVISWNRREPLLAS 319 (440)
T ss_pred -cCccccccccchh---hhccCCccCceEEeeecCceEEEEEecCCCccc-----eeEeeccCCceeeEEccCCcceeee
Confidence 1245677999998 999999989999999999999999999986532 223478999999999984 36888
Q ss_pred cCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEE
Q psy4579 247 HTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVL 326 (368)
Q Consensus 247 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~ 326 (368)
++.++..++|.++.- ..++.+.++. .|..+|+++.|+|.....|++++.|..|.
T Consensus 320 G~DdGt~~iwDLR~~-------------------------~~~~pVA~fk-~Hk~pItsieW~p~e~s~iaasg~D~Qit 373 (440)
T KOG0302|consen 320 GGDDGTLSIWDLRQF-------------------------KSGQPVATFK-YHKAPITSIEWHPHEDSVIAASGEDNQIT 373 (440)
T ss_pred cCCCceEEEEEhhhc-------------------------cCCCcceeEE-eccCCeeEEEeccccCceEEeccCCCcEE
Confidence 888888888765421 1245566666 79999999999999888999999999999
Q ss_pred EEECCCCCCCCCC-------CCCCCCceeeecc--cCceeeecceeee
Q psy4579 327 VFDYTKHPSKPDP-------NGECHPDLRLRGH--QKEGLIEGTYNCY 365 (368)
Q Consensus 327 iwd~~~~~~~~~~-------~~~~~~~~~~~gh--~~~V~~l~w~p~~ 365 (368)
|||+....+..+. .....|++.| -| +..|..|.|++..
T Consensus 374 iWDlsvE~D~ee~~~~a~~~L~dlPpQLLF-VHqGQke~KevhWH~Qi 420 (440)
T KOG0302|consen 374 IWDLSVEADEEEIDQEAAEGLQDLPPQLLF-VHQGQKEVKEVHWHRQI 420 (440)
T ss_pred EEEeeccCChhhhccccccchhcCCceeEE-EecchhHhhhheeccCC
Confidence 9999876652221 1123333333 34 4578888888653
|
|
| >KOG0306|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.4e-24 Score=195.10 Aligned_cols=257 Identities=15% Similarity=0.208 Sum_probs=203.5
Q ss_pred hhhhhhhhhcCcchheeecccccccCceeeEecCCcccccCCCCccccccCcceeeeccccCCCCCc-EEEEEEecCCCc
Q psy4579 17 NEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQNH-LLIASVQLPNED 95 (368)
Q Consensus 17 ~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~ 95 (368)
.+.+|+|+..+..+.+++.+. -++++.|.|..+++++|...|.+ -.|+.+.+......+.+ -.|.++...+++
T Consensus 393 ~~SikiWn~~t~kciRTi~~~----y~l~~~Fvpgd~~Iv~G~k~Gel--~vfdlaS~~l~Eti~AHdgaIWsi~~~pD~ 466 (888)
T KOG0306|consen 393 GESIKIWNRDTLKCIRTITCG----YILASKFVPGDRYIVLGTKNGEL--QVFDLASASLVETIRAHDGAIWSISLSPDN 466 (888)
T ss_pred CCcEEEEEccCcceeEEeccc----cEEEEEecCCCceEEEeccCCce--EEEEeehhhhhhhhhccccceeeeeecCCC
Confidence 478899999999999988887 68999999999999999999988 55666655555554333 357888886665
Q ss_pred cccccCCcccCCCCcccCCCCCeee--------ee-----ccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCC
Q psy4579 96 AQFDASNYDTDKGGNVQLPNEDAQF--------DA-----SNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATP 162 (368)
Q Consensus 96 ~~~~~~~~~~~~~g~i~i~~~~~~~--------~~-----~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~ 162 (368)
..+..+ ++|.+|++|+..-.. .. ....-.+.|.|+++||+| .+||.+--|.+|+||-+++.+
T Consensus 467 ~g~vT~----saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~Spdg-k~LaVsLLdnTVkVyflDtlK 541 (888)
T KOG0306|consen 467 KGFVTG----SADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCVSVSPDG-KLLAVSLLDNTVKVYFLDTLK 541 (888)
T ss_pred CceEEe----cCCcEEEEEeEEEEeccCcccceeeeeccceEEeccccEEEEEEcCCC-cEEEEEeccCeEEEEEeccee
Confidence 544433 369999999853211 11 223356889999999999 999999999999999999864
Q ss_pred CCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee-
Q psy4579 163 KENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR- 241 (368)
Q Consensus 163 ~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~- 241 (368)
....+.||.-||. |+..+|+ +.+++|||.|.+|++|-+.-+ +|.+++-+|.+.|.++.|-|
T Consensus 542 -------FflsLYGHkLPV~---smDIS~D-SklivTgSADKnVKiWGLdFG-------DCHKS~fAHdDSvm~V~F~P~ 603 (888)
T KOG0306|consen 542 -------FFLSLYGHKLPVL---SMDISPD-SKLIVTGSADKNVKIWGLDFG-------DCHKSFFAHDDSVMSVQFLPK 603 (888)
T ss_pred -------eeeeeccccccee---EEeccCC-cCeEEeccCCCceEEeccccc-------hhhhhhhcccCceeEEEEccc
Confidence 5678999999996 9999999 999999999999999999888 67888999999999999987
Q ss_pred -ecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEec
Q psy4579 242 -LILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKT 320 (368)
Q Consensus 242 -~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs 320 (368)
..+-+++.|+.++.| |...-..+..+. +|...|+|++..|+| .+++|+|
T Consensus 604 ~~~FFt~gKD~kvKqW----------------------------Dg~kFe~iq~L~-~H~~ev~cLav~~~G-~~vvs~s 653 (888)
T KOG0306|consen 604 THLFFTCGKDGKVKQW----------------------------DGEKFEEIQKLD-GHHSEVWCLAVSPNG-SFVVSSS 653 (888)
T ss_pred ceeEEEecCcceEEee----------------------------chhhhhhheeec-cchheeeeeEEcCCC-CeEEecc
Confidence 444555544444433 222223344444 899999999999999 6777999
Q ss_pred CCCeEEEEECCC
Q psy4579 321 PSSDVLVFDYTK 332 (368)
Q Consensus 321 ~Dg~i~iwd~~~ 332 (368)
.|.+|++|....
T Consensus 654 hD~sIRlwE~td 665 (888)
T KOG0306|consen 654 HDKSIRLWERTD 665 (888)
T ss_pred CCceeEeeeccC
Confidence 999999999876
|
|
| >KOG0266|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.4e-23 Score=193.06 Aligned_cols=210 Identities=18% Similarity=0.352 Sum_probs=157.9
Q ss_pred EEEEEecCCCccccccCCcccCCCCcccCCCCCe-e--eeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCC
Q psy4579 85 LIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDA-Q--FDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINAT 161 (368)
Q Consensus 85 ~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~-~--~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~ 161 (368)
.+.++.+.+++..+.+. +.++.+++|+... . ....+.+|...|++++|+|++ .++++|+.|++++|||+...
T Consensus 161 sv~~~~fs~~g~~l~~~----~~~~~i~~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d~-~~l~s~s~D~tiriwd~~~~ 235 (456)
T KOG0266|consen 161 SVTCVDFSPDGRALAAA----SSDGLIRIWKLEGIKSNLLRELSGHTRGVSDVAFSPDG-SYLLSGSDDKTLRIWDLKDD 235 (456)
T ss_pred ceEEEEEcCCCCeEEEc----cCCCcEEEeecccccchhhccccccccceeeeEECCCC-cEEEEecCCceEEEeeccCC
Confidence 45556665554443322 3588999999854 2 345557899999999999999 89999999999999999443
Q ss_pred CCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee
Q psy4579 162 PKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR 241 (368)
Q Consensus 162 ~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~ 241 (368)
.. .++++++|...|. +++|+|. ++++++|+.|++|+|||++++ .+...+.+|...|.+++|++
T Consensus 236 ~~------~~~~l~gH~~~v~---~~~f~p~-g~~i~Sgs~D~tvriWd~~~~-------~~~~~l~~hs~~is~~~f~~ 298 (456)
T KOG0266|consen 236 GR------NLKTLKGHSTYVT---SVAFSPD-GNLLVSGSDDGTVRIWDVRTG-------ECVRKLKGHSDGISGLAFSP 298 (456)
T ss_pred Ce------EEEEecCCCCceE---EEEecCC-CCEEEEecCCCcEEEEeccCC-------eEEEeeeccCCceEEEEECC
Confidence 22 5789999999995 9999999 699999999999999999996 57889999999999999985
Q ss_pred --ecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCce--eeeeecCccc--ceeEEEEeCCCCcE
Q psy4579 242 --LILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKI--EIEIKINHEG--EVNRARYMPQNPCV 315 (368)
Q Consensus 242 --~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~--~~~~~~~h~~--~i~~~~~~p~~~~~ 315 (368)
..+.+++.|+.+++ ||..++.. ...+. ++.. ++++++|+|++ .+
T Consensus 299 d~~~l~s~s~d~~i~v----------------------------wd~~~~~~~~~~~~~-~~~~~~~~~~~~fsp~~-~~ 348 (456)
T KOG0266|consen 299 DGNLLVSASYDGTIRV----------------------------WDLETGSKLCLKLLS-GAENSAPVTSVQFSPNG-KY 348 (456)
T ss_pred CCCEEEEcCCCccEEE----------------------------EECCCCceeeeeccc-CCCCCCceeEEEECCCC-cE
Confidence 33444444444444 44444442 22222 4444 59999999999 56
Q ss_pred EEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeecccCce
Q psy4579 316 IATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEG 356 (368)
Q Consensus 316 lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V 356 (368)
+++++.|+.+++||++. ......+.+|...+
T Consensus 349 ll~~~~d~~~~~w~l~~----------~~~~~~~~~~~~~~ 379 (456)
T KOG0266|consen 349 LLSASLDRTLKLWDLRS----------GKSVGTYTGHSNLV 379 (456)
T ss_pred EEEecCCCeEEEEEccC----------CcceeeecccCCcc
Confidence 66999999999999986 23334566776653
|
|
| >KOG0295|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=6e-24 Score=176.20 Aligned_cols=258 Identities=17% Similarity=0.182 Sum_probs=199.3
Q ss_pred hhhhhhhhhcCcchheeecccccccCceeeEecCCcccccCCCCccccccCcceeeeccccCC-CCCcEEEEEEec-CCC
Q psy4579 17 NEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSD-EQNHLLIASVQL-PNE 94 (368)
Q Consensus 17 ~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~-~~~ 94 (368)
+...|+|...+..+.+.+-.|.- .+.++.|+..|+.|++++.|=.+.+|+++.. ...... ....-.|.++.+ |..
T Consensus 129 d~tikv~D~~tg~~e~~LrGHt~--sv~di~~~a~Gk~l~tcSsDl~~~LWd~~~~-~~c~ks~~gh~h~vS~V~f~P~g 205 (406)
T KOG0295|consen 129 DATIKVFDTETGELERSLRGHTD--SVFDISFDASGKYLATCSSDLSAKLWDFDTF-FRCIKSLIGHEHGVSSVFFLPLG 205 (406)
T ss_pred CceEEEEEccchhhhhhhhcccc--ceeEEEEecCccEEEecCCccchhheeHHHH-HHHHHHhcCcccceeeEEEEecC
Confidence 45566777777777666655533 4999999999999999999977766665443 122222 222234666665 655
Q ss_pred ccccccCCcccCCCCcccCCCCCe-eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCccccccee
Q psy4579 95 DAQFDASNYDTDKGGNVQLPNEDA-QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTI 173 (368)
Q Consensus 95 ~~~~~~~~~~~~~~g~i~i~~~~~-~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~ 173 (368)
+....+ +.|.+|++|+.+. -.+.++.+|..=|..++.+.|| .++|+|+.|.++++|-+.+.. +...
T Consensus 206 d~ilS~-----srD~tik~We~~tg~cv~t~~~h~ewvr~v~v~~DG-ti~As~s~dqtl~vW~~~t~~-------~k~~ 272 (406)
T KOG0295|consen 206 DHILSC-----SRDNTIKAWECDTGYCVKTFPGHSEWVRMVRVNQDG-TIIASCSNDQTLRVWVVATKQ-------CKAE 272 (406)
T ss_pred Ceeeec-----ccccceeEEecccceeEEeccCchHhEEEEEecCCe-eEEEecCCCceEEEEEeccch-------hhhh
Confidence 333333 3589999999886 4566788899999999999999 999999999999999998875 4578
Q ss_pred eeccccceecceeeEEeCCC--------------CCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEE
Q psy4579 174 FTGHTAVVEVRYGLSWNPSL--------------NGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSI 239 (368)
Q Consensus 174 ~~~h~~~v~~~~~i~~~p~~--------------~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~ 239 (368)
+++|+-+|. +++|.|.. ++++.+++.|++|++||+.++ .++.++.+|...|..++|
T Consensus 273 lR~hEh~vE---ci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg-------~cL~tL~ghdnwVr~~af 342 (406)
T KOG0295|consen 273 LREHEHPVE---CIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTG-------MCLFTLVGHDNWVRGVAF 342 (406)
T ss_pred hhccccceE---EEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCC-------eEEEEEecccceeeeeEE
Confidence 899999998 99998851 258999999999999999998 678999999999999999
Q ss_pred ee--ecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEE
Q psy4579 240 HR--LILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIA 317 (368)
Q Consensus 240 ~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~la 317 (368)
+| .++.++.+|++.++ ||+..+++...+. +|..-|+++.|+.+.+ +++
T Consensus 343 ~p~Gkyi~ScaDDktlrv----------------------------wdl~~~~cmk~~~-ah~hfvt~lDfh~~~p-~Vv 392 (406)
T KOG0295|consen 343 SPGGKYILSCADDKTLRV----------------------------WDLKNLQCMKTLE-AHEHFVTSLDFHKTAP-YVV 392 (406)
T ss_pred cCCCeEEEEEecCCcEEE----------------------------EEeccceeeeccC-CCcceeEEEecCCCCc-eEE
Confidence 95 44455555554444 4444566666666 8999999999999996 666
Q ss_pred EecCCCeEEEEEC
Q psy4579 318 TKTPSSDVLVFDY 330 (368)
Q Consensus 318 sgs~Dg~i~iwd~ 330 (368)
||+-|.++++|.-
T Consensus 393 TGsVdqt~KvwEc 405 (406)
T KOG0295|consen 393 TGSVDQTVKVWEC 405 (406)
T ss_pred eccccceeeeeec
Confidence 9999999999974
|
|
| >KOG0973|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.5e-23 Score=195.86 Aligned_cols=268 Identities=18% Similarity=0.278 Sum_probs=186.3
Q ss_pred ccCceeeEecCCcccccCCC--CccccccCcceeeeccccCCCCCcEEEEEEecCCCccccccCCcccCCCCcccCCCCC
Q psy4579 40 EWPSLTAQWLPDVTSVQLPN--EDAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNED 117 (368)
Q Consensus 40 ~~~~~~~~~~p~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~ 117 (368)
+-++.+++-+|||.++|+|+ .|+.+.||+.+...-. ...++.+
T Consensus 13 ~~~IfSIdv~pdg~~~aTgGq~~d~~~~iW~~~~vl~~-----------------------------------~~~~~~~ 57 (942)
T KOG0973|consen 13 EKSIFSIDVHPDGVKFATGGQVLDGGIVIWSQDPVLDE-----------------------------------KEEKNEN 57 (942)
T ss_pred CeeEEEEEecCCceeEecCCccccccceeeccccccch-----------------------------------hhhhhcc
Confidence 34588999999999999998 7777655643222100 0011111
Q ss_pred -eeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCC-----------CCCCcccccceeeeccccceecce
Q psy4579 118 -AQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINAT-----------PKENRVIDAKTIFTGHTAVVEVRY 185 (368)
Q Consensus 118 -~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~-----------~~~~~~~~~~~~~~~h~~~v~~~~ 185 (368)
.+.+.+...|.+.|+|++|+|+| .+||+|+.|+.|.||..... ....+..+....+.+|...|.
T Consensus 58 l~k~l~~m~~h~~sv~CVR~S~dG-~~lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~--- 133 (942)
T KOG0973|consen 58 LPKHLCTMDDHDGSVNCVRFSPDG-SYLASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVL--- 133 (942)
T ss_pred cchhheeeccccCceeEEEECCCC-CeEeeccCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccc---
Confidence 23445667799999999999999 99999999999999998731 111223446778999999995
Q ss_pred eeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee--ecccccCCCCccceEEEE----
Q psy4579 186 GLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LILGTHTSDEQNHLLIAS---- 259 (368)
Q Consensus 186 ~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~d~~~~~~~~~---- 259 (368)
.++|+|+ +.+||++|.|++|.|||.++. ..+..+.+|...|..+.|.| .++++-++|+++.+|-..
T Consensus 134 Dv~Wsp~-~~~lvS~s~DnsViiwn~~tF-------~~~~vl~~H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~dw~i 205 (942)
T KOG0973|consen 134 DVNWSPD-DSLLVSVSLDNSVIIWNAKTF-------ELLKVLRGHQSLVKGVSWDPIGKYFASQSDDRTLKVWRTSDWGI 205 (942)
T ss_pred eeccCCC-ccEEEEecccceEEEEccccc-------eeeeeeecccccccceEECCccCeeeeecCCceEEEEEccccee
Confidence 9999998 999999999999999999987 45788999999999999997 688999999999998421
Q ss_pred -------------------eecCCccccccc-ccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCC--------
Q psy4579 260 -------------------VQLPNEDAQFDA-SNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQ-------- 311 (368)
Q Consensus 260 -------------------~~~~~~~~~~~~-~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~-------- 311 (368)
+..++++..+.. .+.+.....+.+.+..+-+....+ .||.+++.++.|+|.
T Consensus 206 ~k~It~pf~~~~~~T~f~RlSWSPDG~~las~nA~n~~~~~~~IieR~tWk~~~~L-vGH~~p~evvrFnP~lfe~~~~n 284 (942)
T KOG0973|consen 206 EKSITKPFEESPLTTFFLRLSWSPDGHHLASPNAVNGGKSTIAIIERGTWKVDKDL-VGHSAPVEVVRFNPKLFERNNKN 284 (942)
T ss_pred eEeeccchhhCCCcceeeecccCCCcCeecchhhccCCcceeEEEecCCceeeeee-ecCCCceEEEEeChHHhcccccc
Confidence 111121111111 011111111111222222222333 399999999999982
Q ss_pred C----C----cEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceee-ecccCceeeecceeee
Q psy4579 312 N----P----CVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRL-RGHQKEGLIEGTYNCY 365 (368)
Q Consensus 312 ~----~----~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~-~gh~~~V~~l~w~p~~ 365 (368)
| + .++|+||.|++|.||.... .+|+... .--...|..++|+|+.
T Consensus 285 g~~~~~~~~y~i~AvgSqDrSlSVW~T~~----------~RPl~vi~~lf~~SI~DmsWspdG 337 (942)
T KOG0973|consen 285 GTSTQPNCYYCIAAVGSQDRSLSVWNTAL----------PRPLFVIHNLFNKSIVDMSWSPDG 337 (942)
T ss_pred CCccCCCcceEEEEEecCCccEEEEecCC----------CCchhhhhhhhcCceeeeeEcCCC
Confidence 1 1 2899999999999999854 4554332 2235689999999875
|
|
| >KOG0641|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.1e-22 Score=154.95 Aligned_cols=271 Identities=14% Similarity=0.152 Sum_probs=192.1
Q ss_pred ccCceeeEecCCcccccCCCCccccccCcceeeeccccCCCCCcEEEEEEecCCCccccccCCcccCCCCcccCCCCCee
Q psy4579 40 EWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQ 119 (368)
Q Consensus 40 ~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~ 119 (368)
.-.+++++|+|.|...++|+..++++++.|....... ...+ +.. .....
T Consensus 32 sqairav~fhp~g~lyavgsnskt~ric~yp~l~~~r-~~he------------------a~~------------~pp~v 80 (350)
T KOG0641|consen 32 SQAIRAVAFHPAGGLYAVGSNSKTFRICAYPALIDLR-HAHE------------------AAK------------QPPSV 80 (350)
T ss_pred hhheeeEEecCCCceEEeccCCceEEEEccccccCcc-cccc------------------ccc------------CCCeE
Confidence 3468899999999999999999999888765432110 0000 000 00012
Q ss_pred eeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCC---CCCe
Q psy4579 120 FDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPS---LNGY 196 (368)
Q Consensus 120 ~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~---~~~~ 196 (368)
.......|.+.|+|.+|+|+| .++|+|+.|++|++..++...... ......+.-|.+.|+ .++|-.+ ++.+
T Consensus 81 ~~kr~khhkgsiyc~~ws~~g-eliatgsndk~ik~l~fn~dt~~~--~g~dle~nmhdgtir---dl~fld~~~s~~~i 154 (350)
T KOG0641|consen 81 LCKRNKHHKGSIYCTAWSPCG-ELIATGSNDKTIKVLPFNADTCNA--TGHDLEFNMHDGTIR---DLAFLDDPESGGAI 154 (350)
T ss_pred EeeeccccCccEEEEEecCcc-CeEEecCCCceEEEEecccccccc--cCcceeeeecCCcee---eeEEecCCCcCceE
Confidence 233456799999999999999 999999999999998776543211 123466778999997 9999643 2446
Q ss_pred EEEee-CCCcEEEEECCCCCCCCccccceeeeecccccEeEE-EEeeecccccCCCCccceEEEEeec------------
Q psy4579 197 LLSAS-DDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDY-SIHRLILGTHTSDEQNHLLIASVQL------------ 262 (368)
Q Consensus 197 l~s~s-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v-~~~~~~~~~~~~d~~~~~~~~~~~~------------ 262 (368)
|++++ .|..|.+-|..++ .++..+.+|+.-|.++ .|+...+++++.|.++++|..++..
T Consensus 155 l~s~gagdc~iy~tdc~~g-------~~~~a~sghtghilalyswn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~ 227 (350)
T KOG0641|consen 155 LASAGAGDCKIYITDCGRG-------QGFHALSGHTGHILALYSWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDG 227 (350)
T ss_pred EEecCCCcceEEEeecCCC-------CcceeecCCcccEEEEEEecCcEEEccCCCceEEEEeeeccceeeeccCcccCC
Confidence 67665 3566777777776 4578889999988766 6888999999999999999765431
Q ss_pred ------------CCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEEC
Q psy4579 263 ------------PNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDY 330 (368)
Q Consensus 263 ------------~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~ 330 (368)
++.++.+... .......++|.+.++.+..+. .|...|.|+.|+|.. .++.|+|.|-.|++=|+
T Consensus 228 glessavaav~vdpsgrll~sg---~~dssc~lydirg~r~iq~f~-phsadir~vrfsp~a-~yllt~syd~~ikltdl 302 (350)
T KOG0641|consen 228 GLESSAVAAVAVDPSGRLLASG---HADSSCMLYDIRGGRMIQRFH-PHSADIRCVRFSPGA-HYLLTCSYDMKIKLTDL 302 (350)
T ss_pred CcccceeEEEEECCCcceeeec---cCCCceEEEEeeCCceeeeeC-CCccceeEEEeCCCc-eEEEEecccceEEEeec
Confidence 1111111111 111234567777777777776 899999999999998 66779999999999999
Q ss_pred CCCCCCCCCCCCCCCceeeecccCceeeecceeee
Q psy4579 331 TKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p~~ 365 (368)
...- ....++.....|++.+..+.|+|.-
T Consensus 303 qgdl------a~el~~~vv~ehkdk~i~~rwh~~d 331 (350)
T KOG0641|consen 303 QGDL------AHELPIMVVAEHKDKAIQCRWHPQD 331 (350)
T ss_pred ccch------hhcCceEEEEeccCceEEEEecCcc
Confidence 7421 2245556677899999999999864
|
|
| >KOG0283|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.5e-23 Score=191.26 Aligned_cols=280 Identities=13% Similarity=0.110 Sum_probs=176.8
Q ss_pred hhhhhhhhhhhhcCcchheeeccc-ccccCceeeEecCCcccccCCCCccccccCccee------eecc-----------
Q psy4579 14 RVINEEYKIWKKNTPFLYDLVMTH-ALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDT------DKGT----------- 75 (368)
Q Consensus 14 ~~~~~~~~~w~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~------~~~~----------- 75 (368)
+.+.+.++.=-+....++...... .+...|.+++|++||++||+||+|+.|+||...- ..+.
T Consensus 240 rvkv~~~~K~~kelsal~~~Qe~~~ah~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~ 319 (712)
T KOG0283|consen 240 RVKVRHYKKSPKELSALTVVQEISNAHKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNAN 319 (712)
T ss_pred eEEecccCCCcccceeeEEeeccccccCCcEEEEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhc
Confidence 334444444333444444444444 7888999999999999999999999997775433 0000
Q ss_pred ---------c------cCCCCCcEEEEEEecCCCcc---------------ccccCCcc-------cCCCCcccCCCCCe
Q psy4579 76 ---------H------TSDEQNHLLIASVQLPNEDA---------------QFDASNYD-------TDKGGNVQLPNEDA 118 (368)
Q Consensus 76 ---------~------~~~~~~~~~i~~~~~~~~~~---------------~~~~~~~~-------~~~~g~i~i~~~~~ 118 (368)
. ...........++.+|.... .+.-..|. .+.|.+|++|++..
T Consensus 320 s~~~p~~s~~~~~~~~~s~~~~~~~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn~fLLSSSMDKTVRLWh~~~ 399 (712)
T KOG0283|consen 320 SQIEPSTSSEEKISSRTSSSRKGSQSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKNNFLLSSSMDKTVRLWHPGR 399 (712)
T ss_pred cccCccccccccccccccccccccCCccccCCCccccccccchhhhhccchhheecccccCCeeEeccccccEEeecCCC
Confidence 0 00000000011112221111 11111111 25699999999999
Q ss_pred eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEE
Q psy4579 119 QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLL 198 (368)
Q Consensus 119 ~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~ 198 (368)
+.++..+.|.+.|+|++|+|-.++++++|+-||.||||++...+ +.....-...|+ +++|.|+ |+..+
T Consensus 400 ~~CL~~F~HndfVTcVaFnPvDDryFiSGSLD~KvRiWsI~d~~--------Vv~W~Dl~~lIT---Avcy~Pd-Gk~av 467 (712)
T KOG0283|consen 400 KECLKVFSHNDFVTCVAFNPVDDRYFISGSLDGKVRLWSISDKK--------VVDWNDLRDLIT---AVCYSPD-GKGAV 467 (712)
T ss_pred cceeeEEecCCeeEEEEecccCCCcEeecccccceEEeecCcCe--------eEeehhhhhhhe---eEEeccC-CceEE
Confidence 99999999999999999999888999999999999999998652 344444557776 9999999 99999
Q ss_pred EeeCCCcEEEEECCCCCCCCccc---cceeeeecccccEeEEEEeeecccccCCCCccceEEEEeecCCccccccccccc
Q psy4579 199 SASDDHTICLWDINATPKENRVI---DAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYD 275 (368)
Q Consensus 199 s~s~dg~i~iwd~~~~~~~~~~~---~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d 275 (368)
.|+.+|.+++|+.+..+-..... ...+.. .|. .|+.+.|.|.. . ..+++. .-|
T Consensus 468 IGt~~G~C~fY~t~~lk~~~~~~I~~~~~Kk~-~~~-rITG~Q~~p~~-----~---~~vLVT--------------SnD 523 (712)
T KOG0283|consen 468 IGTFNGYCRFYDTEGLKLVSDFHIRLHNKKKK-QGK-RITGLQFFPGD-----P---DEVLVT--------------SND 523 (712)
T ss_pred EEEeccEEEEEEccCCeEEEeeeEeeccCccc-cCc-eeeeeEecCCC-----C---CeEEEe--------------cCC
Confidence 99999999999988753211000 000000 122 67777776410 0 012111 112
Q ss_pred CCCCCcccccCCCCceeeeeecCccc-ceeEEEEeCCCCcEEEEecCCCeEEEEECCCC
Q psy4579 276 TDKGDFGGFGSVSGKIEIEIKINHEG-EVNRARYMPQNPCVIATKTPSSDVLVFDYTKH 333 (368)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~h~~-~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~ 333 (368)
..+.++|.+...++..++..|.. .-....|+.+| ..|++|++|..|++|++...
T Consensus 524 ---SrIRI~d~~~~~lv~KfKG~~n~~SQ~~Asfs~Dg-k~IVs~seDs~VYiW~~~~~ 578 (712)
T KOG0283|consen 524 ---SRIRIYDGRDKDLVHKFKGFRNTSSQISASFSSDG-KHIVSASEDSWVYIWKNDSF 578 (712)
T ss_pred ---CceEEEeccchhhhhhhcccccCCcceeeeEccCC-CEEEEeecCceEEEEeCCCC
Confidence 22445555555555555522332 33668899999 56669999999999998543
|
|
| >KOG0282|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.1e-24 Score=183.93 Aligned_cols=262 Identities=14% Similarity=0.217 Sum_probs=193.9
Q ss_pred CceeeEecC-CcccccCCCCccccccCcceeeeccccCCCC-CcEEEEEEecCCCccccccCCcccCCCCcccCCCCCee
Q psy4579 42 PSLTAQWLP-DVTSVQLPNEDAQFDASNYDTDKGTHTSDEQ-NHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQ 119 (368)
Q Consensus 42 ~~~~~~~~p-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~ 119 (368)
-+.+++|.| .+-+|++++-|+.|.+|+.-- .+....+-+ ....|..+.|......+..++| |+.+++||.++.
T Consensus 216 gvsai~~fp~~~hLlLS~gmD~~vklW~vy~-~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sf----D~~lKlwDtETG 290 (503)
T KOG0282|consen 216 GVSAIQWFPKKGHLLLSGGMDGLVKLWNVYD-DRRCLRTFKGHRKPVRDASFNNCGTSFLSASF----DRFLKLWDTETG 290 (503)
T ss_pred ccchhhhccceeeEEEecCCCceEEEEEEec-CcceehhhhcchhhhhhhhccccCCeeeeeec----ceeeeeeccccc
Confidence 488899999 888999999999998876433 233444422 3346888889888888877775 689999999988
Q ss_pred eeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEE
Q psy4579 120 FDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLS 199 (368)
Q Consensus 120 ~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s 199 (368)
.+...+.....++|+.|+|++++.+++|+.|+.|+.||+++++ .++.+..|-+.|. .+.|-++ +..+++
T Consensus 291 ~~~~~f~~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~k-------vvqeYd~hLg~i~---~i~F~~~-g~rFis 359 (503)
T KOG0282|consen 291 QVLSRFHLDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGK-------VVQEYDRHLGAIL---DITFVDE-GRRFIS 359 (503)
T ss_pred eEEEEEecCCCceeeecCCCCCcEEEEecCCCcEEEEeccchH-------HHHHHHhhhhhee---eeEEccC-CceEee
Confidence 8888888888999999999998999999999999999999985 5677888888885 9999998 999999
Q ss_pred eeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeee--cccccCCCCccceE---------------------
Q psy4579 200 ASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRL--ILGTHTSDEQNHLL--------------------- 256 (368)
Q Consensus 200 ~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~--~~~~~~~d~~~~~~--------------------- 256 (368)
.++|++++||+.+.+..... ....+...+.++..+|. .++.-+-+..+.++
T Consensus 360 sSDdks~riWe~~~~v~ik~------i~~~~~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r~nkkK~feGh~vaG 433 (503)
T KOG0282|consen 360 SSDDKSVRIWENRIPVPIKN------IADPEMHTMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPFRLNKKKRFEGHSVAG 433 (503)
T ss_pred eccCccEEEEEcCCCccchh------hcchhhccCcceecCCCCCeehhhccCceEEEEecccccccCHhhhhcceeccC
Confidence 99999999999988632211 11112233444554442 22222222222221
Q ss_pred -EEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEE
Q psy4579 257 -IASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFD 329 (368)
Q Consensus 257 -~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd 329 (368)
-..+.+++++..+.. ....|.+..||-.+.++...+. +|.+++..+.|+|..+..+||++.||.|++||
T Consensus 434 ys~~v~fSpDG~~l~S---GdsdG~v~~wdwkt~kl~~~lk-ah~~~ci~v~wHP~e~Skvat~~w~G~Ikiwd 503 (503)
T KOG0282|consen 434 YSCQVDFSPDGRTLCS---GDSDGKVNFWDWKTTKLVSKLK-AHDQPCIGVDWHPVEPSKVATCGWDGLIKIWD 503 (503)
T ss_pred ceeeEEEcCCCCeEEe---ecCCccEEEeechhhhhhhccc-cCCcceEEEEecCCCcceeEecccCceeEecC
Confidence 122334443333321 2344667788888877777776 89999999999999889999999999999996
|
|
| >KOG0772|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.8e-23 Score=180.67 Aligned_cols=289 Identities=16% Similarity=0.109 Sum_probs=194.3
Q ss_pred CcchheeecccccccCceeeEecCCcccccCCCCccccccCcceeeeccccCC--CC--CcEEEEEEecCCCccccccCC
Q psy4579 27 TPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSD--EQ--NHLLIASVQLPNEDAQFDASN 102 (368)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~i~~~~~~~~~~~~~~~~ 102 (368)
.|.--.-.+.+ ..--|+++.+.|.|.++++||.|-++.+|++.-...+..+- .+ ..-.|.++.+++....+.+..
T Consensus 155 IP~shEi~l~h-gtk~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLvvs 233 (641)
T KOG0772|consen 155 IPGSHEIQLKH-GTKIVSALAVDPSGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQILVVS 233 (641)
T ss_pred CCccceEeccC-CceEEEEeeecCCCceeeeccccceEEEEecccccccchhhhccCcccccccceeeecCCCCeEEEEe
Confidence 44433333333 33358899999999999999999999888776443332221 11 233577888876555544332
Q ss_pred cccCCCCcccCCCCCeee-------------eeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccc
Q psy4579 103 YDTDKGGNVQLPNEDAQF-------------DASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVID 169 (368)
Q Consensus 103 ~~~~~~g~i~i~~~~~~~-------------~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~ 169 (368)
+.-..+++|.++.. +....+|...++|.+|+|.....++|++.||++||||+++.+.+...++
T Consensus 234 ----g~aqakl~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik 309 (641)
T KOG0772|consen 234 ----GSAQAKLLDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIK 309 (641)
T ss_pred ----cCcceeEEccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEe
Confidence 24566777766522 2245779999999999999878999999999999999998765433222
Q ss_pred cceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccc--cEeEEEEee--eccc
Q psy4579 170 AKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTA--VVEDYSIHR--LILG 245 (368)
Q Consensus 170 ~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~--~v~~v~~~~--~~~~ 245 (368)
.. .-.+..-+++ +++|+|+ +.+||+|..||+|++||.+...... .+..-.+|.. .|+||.|+. ..+.
T Consensus 310 ~k-~~~g~Rv~~t---sC~~nrd-g~~iAagc~DGSIQ~W~~~~~~v~p----~~~vk~AH~~g~~Itsi~FS~dg~~Ll 380 (641)
T KOG0772|consen 310 TK-PAGGKRVPVT---SCAWNRD-GKLIAAGCLDGSIQIWDKGSRTVRP----VMKVKDAHLPGQDITSISFSYDGNYLL 380 (641)
T ss_pred ec-cCCCcccCce---eeecCCC-cchhhhcccCCceeeeecCCccccc----ceEeeeccCCCCceeEEEeccccchhh
Confidence 11 1112333444 8999999 9999999999999999986653221 1233456766 899999985 5666
Q ss_pred ccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeec--CcccceeEEEEeCCCCcEEEEec---
Q psy4579 246 THTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKI--NHEGEVNRARYMPQNPCVIATKT--- 320 (368)
Q Consensus 246 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~--~h~~~i~~~~~~p~~~~~lasgs--- 320 (368)
+-+.|...++|.++ .-+..+.... ....+-+.++|+|+. .+|+||+
T Consensus 381 SRg~D~tLKvWDLr----------------------------q~kkpL~~~tgL~t~~~~tdc~FSPd~-kli~TGtS~~ 431 (641)
T KOG0772|consen 381 SRGFDDTLKVWDLR----------------------------QFKKPLNVRTGLPTPFPGTDCCFSPDD-KLILTGTSAP 431 (641)
T ss_pred hccCCCceeeeecc----------------------------ccccchhhhcCCCccCCCCccccCCCc-eEEEeccccc
Confidence 66666666666543 2221111111 233456789999999 6887875
Q ss_pred ---CCCeEEEEECCCCCCCCCCCCCCCCceeeecccCceeeecceeeeecC
Q psy4579 321 ---PSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYNCYLQR 368 (368)
Q Consensus 321 ---~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p~~~~~ 368 (368)
..|++.+||..+ ...+..+.--...|..+.|||..+|.
T Consensus 432 ~~~~~g~L~f~d~~t----------~d~v~ki~i~~aSvv~~~WhpkLNQi 472 (641)
T KOG0772|consen 432 NGMTAGTLFFFDRMT----------LDTVYKIDISTASVVRCLWHPKLNQI 472 (641)
T ss_pred CCCCCceEEEEeccc----------eeeEEEecCCCceEEEEeecchhhhe
Confidence 367899999876 33333443447789999999999883
|
|
| >PTZ00420 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.2e-22 Score=185.73 Aligned_cols=257 Identities=11% Similarity=0.038 Sum_probs=155.8
Q ss_pred CCCCccccccCcceeeeccccCCCCC-cEEEEEEecCCCccccccCCcccCCCCcccCCCCCee---------eeecccc
Q psy4579 57 LPNEDAQFDASNYDTDKGTHTSDEQN-HLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQ---------FDASNYD 126 (368)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~---------~~~~~~~ 126 (368)
.|+..+.+.+|.. ........... ...|.++.|.+.+..+.+++ +.||.|++|++... ....+.+
T Consensus 49 gGG~~gvI~L~~~--~r~~~v~~L~gH~~~V~~lafsP~~~~lLASg---S~DgtIrIWDi~t~~~~~~~i~~p~~~L~g 123 (568)
T PTZ00420 49 GGGLIGAIRLENQ--MRKPPVIKLKGHTSSILDLQFNPCFSEILASG---SEDLTIRVWEIPHNDESVKEIKDPQCILKG 123 (568)
T ss_pred CCCceeEEEeeec--CCCceEEEEcCCCCCEEEEEEcCCCCCEEEEE---eCCCeEEEEECCCCCccccccccceEEeec
Confidence 3555666655532 22222222222 23588888866533333333 46999999997531 1234578
Q ss_pred CCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcE
Q psy4579 127 TDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTI 206 (368)
Q Consensus 127 h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i 206 (368)
|.+.|.+++|+|++..+|++++.|++|+|||++++. ....+. |...|. +++|+|+ +.+|++++.|+.|
T Consensus 124 H~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~-------~~~~i~-~~~~V~---Slswspd-G~lLat~s~D~~I 191 (568)
T PTZ00420 124 HKKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEK-------RAFQIN-MPKKLS---SLKWNIK-GNLLSGTCVGKHM 191 (568)
T ss_pred CCCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCc-------EEEEEe-cCCcEE---EEEECCC-CCEEEEEecCCEE
Confidence 999999999999984567899999999999998764 223443 556675 9999999 9999999999999
Q ss_pred EEEECCCCCCCCccccceeeeecccccEeEEEEeeecccccCCCCccceEEEEeecCCcccccccccccC-CCCCccccc
Q psy4579 207 CLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDT-DKGDFGGFG 285 (368)
Q Consensus 207 ~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~ 285 (368)
+|||++++ ..+..+.+|...+....+....+ .++...+....+|. ....+.+||
T Consensus 192 rIwD~Rsg-------~~i~tl~gH~g~~~s~~v~~~~f------------------s~d~~~IlTtG~d~~~~R~VkLWD 246 (568)
T PTZ00420 192 HIIDPRKQ-------EIASSFHIHDGGKNTKNIWIDGL------------------GGDDNYILSTGFSKNNMREMKLWD 246 (568)
T ss_pred EEEECCCC-------cEEEEEecccCCceeEEEEeeeE------------------cCCCCEEEEEEcCCCCccEEEEEE
Confidence 99999987 34567888887655433321000 00111111112221 112345555
Q ss_pred CCC-Cceeeeeec-CcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeecccCceeeeccee
Q psy4579 286 SVS-GKIEIEIKI-NHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYN 363 (368)
Q Consensus 286 ~~~-~~~~~~~~~-~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p 363 (368)
.+. ++.+..... .+.+.+.. .|.++...++++|+.|++|++|++... ....+..+ .+..++.+++|.|
T Consensus 247 lr~~~~pl~~~~ld~~~~~L~p-~~D~~tg~l~lsGkGD~tIr~~e~~~~--------~~~~l~~~-~s~~p~~g~~f~P 316 (568)
T PTZ00420 247 LKNTTSALVTMSIDNASAPLIP-HYDESTGLIYLIGKGDGNCRYYQHSLG--------SIRKVNEY-KSCSPFRSFGFLP 316 (568)
T ss_pred CCCCCCceEEEEecCCccceEE-eeeCCCCCEEEEEECCCeEEEEEccCC--------cEEeeccc-ccCCCccceEEcc
Confidence 553 233322221 12223332 344443378889999999999999742 12222222 2567778888888
Q ss_pred ee
Q psy4579 364 CY 365 (368)
Q Consensus 364 ~~ 365 (368)
..
T Consensus 317 kr 318 (568)
T PTZ00420 317 KQ 318 (568)
T ss_pred cc
Confidence 64
|
|
| >KOG0310|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.7e-23 Score=177.63 Aligned_cols=261 Identities=16% Similarity=0.189 Sum_probs=185.1
Q ss_pred cccccCceeeEecCCccc-c-cCCCCccccccCcceeeeccccCCCCC-cEEEEEEecCCCccccccCCcccCCCCcccC
Q psy4579 37 HALEWPSLTAQWLPDVTS-V-QLPNEDAQFDASNYDTDKGTHTSDEQN-HLLIASVQLPNEDAQFDASNYDTDKGGNVQL 113 (368)
Q Consensus 37 ~~~~~~~~~~~~~p~~~~-l-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i 113 (368)
++-.-++.+++|+|..-+ + +++|..- ..|....-........ ...+.++.|..++..+ +++ +..|.|++
T Consensus 23 ~ke~~~vssl~fsp~~P~d~aVt~S~rv----qly~~~~~~~~k~~srFk~~v~s~~fR~DG~Ll-aaG---D~sG~V~v 94 (487)
T KOG0310|consen 23 HKEHNSVSSLCFSPKHPYDFAVTSSVRV----QLYSSVTRSVRKTFSRFKDVVYSVDFRSDGRLL-AAG---DESGHVKV 94 (487)
T ss_pred ccccCcceeEecCCCCCCceEEecccEE----EEEecchhhhhhhHHhhccceeEEEeecCCeEE-Ecc---CCcCcEEE
Confidence 444567889999995332 3 3333322 2233322111111111 2357788887665444 444 46899999
Q ss_pred CCCCee-eeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCC
Q psy4579 114 PNEDAQ-FDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPS 192 (368)
Q Consensus 114 ~~~~~~-~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~ 192 (368)
+|.+.+ .+..+..|+.+|..+.|+|.+...|++|+.|+.+++||+.+.. ....+.+|++.|+ |.+|+|.
T Consensus 95 fD~k~r~iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~-------v~~~l~~htDYVR---~g~~~~~ 164 (487)
T KOG0310|consen 95 FDMKSRVILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAY-------VQAELSGHTDYVR---CGDISPA 164 (487)
T ss_pred eccccHHHHHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcE-------EEEEecCCcceeE---eeccccC
Confidence 997664 4556788999999999999987899999999999999999863 2457899999998 9999998
Q ss_pred CCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee--ecccccCCCCccceEEEEeecCCcccccc
Q psy4579 193 LNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LILGTHTSDEQNHLLIASVQLPNEDAQFD 270 (368)
Q Consensus 193 ~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 270 (368)
.+.+++|||.||+|++||++.... .+..+ .|..+|..+.+-| .+++++++ .
T Consensus 165 ~~hivvtGsYDg~vrl~DtR~~~~------~v~el-nhg~pVe~vl~lpsgs~iasAgG-n------------------- 217 (487)
T KOG0310|consen 165 NDHIVVTGSYDGKVRLWDTRSLTS------RVVEL-NHGCPVESVLALPSGSLIASAGG-N------------------- 217 (487)
T ss_pred CCeEEEecCCCceEEEEEeccCCc------eeEEe-cCCCceeeEEEcCCCCEEEEcCC-C-------------------
Confidence 777999999999999999998631 22333 4889999988865 23333332 1
Q ss_pred cccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeee
Q psy4579 271 ASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLR 350 (368)
Q Consensus 271 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 350 (368)
.+..||+.+|.........|...|+|+.+..++. .|.|||-|+.|++||+.. ...+.. .
T Consensus 218 ---------~vkVWDl~~G~qll~~~~~H~KtVTcL~l~s~~~-rLlS~sLD~~VKVfd~t~----------~Kvv~s-~ 276 (487)
T KOG0310|consen 218 ---------SVKVWDLTTGGQLLTSMFNHNKTVTCLRLASDST-RLLSGSLDRHVKVFDTTN----------YKVVHS-W 276 (487)
T ss_pred ---------eEEEEEecCCceehhhhhcccceEEEEEeecCCc-eEeecccccceEEEEccc----------eEEEEe-e
Confidence 2445555556666555546999999999999984 555999999999999864 222222 2
Q ss_pred cccCceeeeccee
Q psy4579 351 GHQKEGLIEGTYN 363 (368)
Q Consensus 351 gh~~~V~~l~w~p 363 (368)
...++|.+++-+|
T Consensus 277 ~~~~pvLsiavs~ 289 (487)
T KOG0310|consen 277 KYPGPVLSIAVSP 289 (487)
T ss_pred ecccceeeEEecC
Confidence 5678888888887
|
|
| >cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.3e-22 Score=175.78 Aligned_cols=256 Identities=20% Similarity=0.314 Sum_probs=183.7
Q ss_pred hhhhhhhhhcCcchheeecccccccCceeeEecCCcccccCCCCccccccCcceeeeccccCCCCC-cEEEEEEecCCCc
Q psy4579 17 NEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQN-HLLIASVQLPNED 95 (368)
Q Consensus 17 ~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~ 95 (368)
+...++|+.........+.. ..-++..+.|+|+++.+++++.++.+.+|+... +........ ...+.++.+.+..
T Consensus 30 ~g~i~i~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~~~--~~~~~~~~~~~~~i~~~~~~~~~ 105 (289)
T cd00200 30 DGTIKVWDLETGELLRTLKG--HTGPVRDVAASADGTYLASGSSDKTIRLWDLET--GECVRTLTGHTSYVSSVAFSPDG 105 (289)
T ss_pred CcEEEEEEeeCCCcEEEEec--CCcceeEEEECCCCCEEEEEcCCCeEEEEEcCc--ccceEEEeccCCcEEEEEEcCCC
Confidence 44566777665543333322 334667899999999999999999996665543 222222111 2256777775543
Q ss_pred cccccCCcccCCCCcccCCCCC-eeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceee
Q psy4579 96 AQFDASNYDTDKGGNVQLPNED-AQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIF 174 (368)
Q Consensus 96 ~~~~~~~~~~~~~g~i~i~~~~-~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~ 174 (368)
..+. .+ ..+|.+.+|+.. .+....+..|...|.+++|+|++ .++++++.||.|++||+++.. +...+
T Consensus 106 ~~~~-~~---~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~~~~i~i~d~~~~~-------~~~~~ 173 (289)
T cd00200 106 RILS-SS---SRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDG-TFVASSSQDGTIKLWDLRTGK-------CVATL 173 (289)
T ss_pred CEEE-Ee---cCCCeEEEEECCCcEEEEEeccCCCcEEEEEEcCcC-CEEEEEcCCCcEEEEEccccc-------cceeE
Confidence 3222 22 248999999987 45555666799999999999997 888888889999999998654 45677
Q ss_pred eccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee--ecccccCCCCc
Q psy4579 175 TGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LILGTHTSDEQ 252 (368)
Q Consensus 175 ~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~d~~ 252 (368)
..|...+. +++|+|+ +..+++++.|+.|++||++.+ .....+..|...+.++.|++ .++.+++.+
T Consensus 174 ~~~~~~i~---~~~~~~~-~~~l~~~~~~~~i~i~d~~~~-------~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-- 240 (289)
T cd00200 174 TGHTGEVN---SVAFSPD-GEKLLSSSSDGTIKLWDLSTG-------KCLGTLRGHENGVNSVAFSPDGYLLASGSED-- 240 (289)
T ss_pred ecCccccc---eEEECCC-cCEEEEecCCCcEEEEECCCC-------ceecchhhcCCceEEEEEcCCCcEEEEEcCC--
Confidence 78888885 9999998 788889999999999999875 34555667888999999986 222222222
Q ss_pred cceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEE
Q psy4579 253 NHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFD 329 (368)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd 329 (368)
+.+.+|+..+++....+. .|...|.+++|+|++ .+|++++.||.|++|+
T Consensus 241 --------------------------~~i~i~~~~~~~~~~~~~-~~~~~i~~~~~~~~~-~~l~~~~~d~~i~iw~ 289 (289)
T cd00200 241 --------------------------GTIRVWDLRTGECVQTLS-GHTNSVTSLAWSPDG-KRLASGSADGTIRIWD 289 (289)
T ss_pred --------------------------CcEEEEEcCCceeEEEcc-ccCCcEEEEEECCCC-CEEEEecCCCeEEecC
Confidence 334444444455555555 788999999999998 5778999999999996
|
|
| >KOG0288|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.4e-23 Score=175.25 Aligned_cols=265 Identities=15% Similarity=0.156 Sum_probs=181.8
Q ss_pred cccccCceeeEecCCcccccCCCCccccccCcceeeeccccCC-CCCcEEEEEEecCCCccccccCCcccCCCCcccCCC
Q psy4579 37 HALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSD-EQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPN 115 (368)
Q Consensus 37 ~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~ 115 (368)
..++|-+..+.|.++...|++|+.|..|.+|+-.....+.... .+..-.|..+.+.+.+..+.++. .|+.+++|+
T Consensus 172 d~h~gev~~v~~l~~sdtlatgg~Dr~Ik~W~v~~~k~~~~~tLaGs~g~it~~d~d~~~~~~iAas----~d~~~r~Wn 247 (459)
T KOG0288|consen 172 DAHEGEVHDVEFLRNSDTLATGGSDRIIKLWNVLGEKSELISTLAGSLGNITSIDFDSDNKHVIAAS----NDKNLRLWN 247 (459)
T ss_pred hccccccceeEEccCcchhhhcchhhhhhhhhcccchhhhhhhhhccCCCcceeeecCCCceEEeec----CCCceeeee
Confidence 3468889999999999999999999999777654444333333 33334578888876666666655 589999999
Q ss_pred CCe-eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCC
Q psy4579 116 EDA-QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLN 194 (368)
Q Consensus 116 ~~~-~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~ 194 (368)
.+. +...++.+|++.|+++.|.... ..+++|+.|.+|++||+.+..+ .+++-. ...+ ..|..+ .
T Consensus 248 vd~~r~~~TLsGHtdkVt~ak~~~~~-~~vVsgs~DRtiK~WDl~k~~C-------~kt~l~-~S~c---nDI~~~---~ 312 (459)
T KOG0288|consen 248 VDSLRLRHTLSGHTDKVTAAKFKLSH-SRVVSGSADRTIKLWDLQKAYC-------SKTVLP-GSQC---NDIVCS---I 312 (459)
T ss_pred ccchhhhhhhcccccceeeehhhccc-cceeeccccchhhhhhhhhhhe-------eccccc-cccc---cceEec---c
Confidence 975 6677889999999999999876 5699999999999999988643 222211 1122 144443 4
Q ss_pred CeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee--ecccccCCCCccceEEEEeecCCcccccccc
Q psy4579 195 GYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LILGTHTSDEQNHLLIASVQLPNEDAQFDAS 272 (368)
Q Consensus 195 ~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 272 (368)
..++||-.|++|++||.+.. .+......+. .|+++..+. .-+.+.+.|....+
T Consensus 313 ~~~~SgH~DkkvRfwD~Rs~-------~~~~sv~~gg-~vtSl~ls~~g~~lLsssRDdtl~v----------------- 367 (459)
T KOG0288|consen 313 SDVISGHFDKKVRFWDIRSA-------DKTRSVPLGG-RVTSLDLSMDGLELLSSSRDDTLKV----------------- 367 (459)
T ss_pred eeeeecccccceEEEeccCC-------ceeeEeecCc-ceeeEeeccCCeEEeeecCCCceee-----------------
Confidence 56889999999999999987 3455555554 788877753 22222233333332
Q ss_pred cccCCCCCcccccCCCCceeeeeec---CcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceee
Q psy4579 273 NYDTDKGDFGGFGSVSGKIEIEIKI---NHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRL 349 (368)
Q Consensus 273 ~~d~~~~~~~~~~~~~~~~~~~~~~---~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 349 (368)
.|.++..+...+.. -.....+.+.|+|++ .++|+||.||.|+||++.. +++..+...
T Consensus 368 -----------iDlRt~eI~~~~sA~g~k~asDwtrvvfSpd~-~YvaAGS~dgsv~iW~v~t--------gKlE~~l~~ 427 (459)
T KOG0288|consen 368 -----------IDLRTKEIRQTFSAEGFKCASDWTRVVFSPDG-SYVAAGSADGSVYIWSVFT--------GKLEKVLSL 427 (459)
T ss_pred -----------eecccccEEEEeeccccccccccceeEECCCC-ceeeeccCCCcEEEEEccC--------ceEEEEecc
Confidence 22222333222211 112348999999999 6888999999999999976 334443333
Q ss_pred ecccCceeeecceeee
Q psy4579 350 RGHQKEGLIEGTYNCY 365 (368)
Q Consensus 350 ~gh~~~V~~l~w~p~~ 365 (368)
.+-...|++++|+|..
T Consensus 428 s~s~~aI~s~~W~~sG 443 (459)
T KOG0288|consen 428 STSNAAITSLSWNPSG 443 (459)
T ss_pred CCCCcceEEEEEcCCC
Confidence 3333379999999865
|
|
| >KOG0305|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.2e-23 Score=184.13 Aligned_cols=272 Identities=19% Similarity=0.276 Sum_probs=195.4
Q ss_pred hhhhhhhhcCcchheeecccccccCceeeEecCCcccccCCCCccccccCcceeeeccccCC-CCCcEEEEEEecCCCcc
Q psy4579 18 EEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSD-EQNHLLIASVQLPNEDA 96 (368)
Q Consensus 18 ~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~ 96 (368)
..|++ ...|.+++-++.+.++|.. ...|++|... .+.+| +...|.-... ..+...+.++.+...+.
T Consensus 164 ~p~rv--LDaP~l~dDfY~nlldWss--------~n~laValg~-~vylW--~~~s~~v~~l~~~~~~~vtSv~ws~~G~ 230 (484)
T KOG0305|consen 164 TPYRV--LDAPGLQDDFYLNLLDWSS--------ANVLAVALGQ-SVYLW--SASSGSVTELCSFGEELVTSVKWSPDGS 230 (484)
T ss_pred Chhhh--ccCCcccccHhhhHhhccc--------CCeEEEEecc-eEEEE--ecCCCceEEeEecCCCceEEEEECCCCC
Confidence 34444 5777888888888776643 3445555443 23334 4444332111 11145688888876655
Q ss_pred ccccCCcccCCCCcccCCCCCe-eeeecccc-CCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceee
Q psy4579 97 QFDASNYDTDKGGNVQLPNEDA-QFDASNYD-TDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIF 174 (368)
Q Consensus 97 ~~~~~~~~~~~~g~i~i~~~~~-~~~~~~~~-h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~ 174 (368)
.+.. + ..+|.|.|||... +....+.+ |...|-+++|+ + ..+.+|+.||.|..+|++.... ....+
T Consensus 231 ~Lav-G---~~~g~v~iwD~~~~k~~~~~~~~h~~rvg~laW~--~-~~lssGsr~~~I~~~dvR~~~~------~~~~~ 297 (484)
T KOG0305|consen 231 HLAV-G---TSDGTVQIWDVKEQKKTRTLRGSHASRVGSLAWN--S-SVLSSGSRDGKILNHDVRISQH------VVSTL 297 (484)
T ss_pred EEEE-e---ecCCeEEEEehhhccccccccCCcCceeEEEecc--C-ceEEEecCCCcEEEEEEecchh------hhhhh
Confidence 4443 3 2589999999865 34455556 99999999999 3 7899999999999999998753 22358
Q ss_pred eccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee---ecccccCCCC
Q psy4579 175 TGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR---LILGTHTSDE 251 (368)
Q Consensus 175 ~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~---~~~~~~~~d~ 251 (368)
.+|...|+ .++|+++ +.++|+|+.|+.+.|||.... .++..+..|...|.+++|+| .++++|++..
T Consensus 298 ~~H~qeVC---gLkws~d-~~~lASGgnDN~~~Iwd~~~~-------~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~ 366 (484)
T KOG0305|consen 298 QGHRQEVC---GLKWSPD-GNQLASGGNDNVVFIWDGLSP-------EPKFTFTEHTAAVKALAWCPWQSGLLATGGGSA 366 (484)
T ss_pred hcccceee---eeEECCC-CCeeccCCCccceEeccCCCc-------cccEEEeccceeeeEeeeCCCccCceEEcCCCc
Confidence 89999997 9999999 999999999999999999554 56788899999999999987 4666665533
Q ss_pred ccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEe-cCCCeEEEEEC
Q psy4579 252 QNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATK-TPSSDVLVFDY 330 (368)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasg-s~Dg~i~iwd~ 330 (368)
.-.+ .+|+..++..+... .-...|..|.|++....++++. -.+..|.||++
T Consensus 367 D~~i--------------------------~fwn~~~g~~i~~v--dtgsQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ 418 (484)
T KOG0305|consen 367 DRCI--------------------------KFWNTNTGARIDSV--DTGSQVCSLIWSKKYKELLSTHGYSENQITLWKY 418 (484)
T ss_pred ccEE--------------------------EEEEcCCCcEeccc--ccCCceeeEEEcCCCCEEEEecCCCCCcEEEEec
Confidence 3222 22333334443333 3457899999999985566554 45678999999
Q ss_pred CCCCCCCCCCCCCCCceeeecccCceeeecceee
Q psy4579 331 TKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYNC 364 (368)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p~ 364 (368)
.. ..++..+.||..+|..++|+|.
T Consensus 419 ps----------~~~~~~l~gH~~RVl~la~SPd 442 (484)
T KOG0305|consen 419 PS----------MKLVAELLGHTSRVLYLALSPD 442 (484)
T ss_pred cc----------cceeeeecCCcceeEEEEECCC
Confidence 75 5566688999999999999997
|
|
| >KOG0293|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.6e-23 Score=173.62 Aligned_cols=219 Identities=18% Similarity=0.222 Sum_probs=158.2
Q ss_pred eeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEe
Q psy4579 121 DASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSA 200 (368)
Q Consensus 121 ~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~ 200 (368)
...+..|.+.|+-+.||++| ++||+++.|.+..+|++..... ++..+++.+|..+|. -+.|+|| ..+|++|
T Consensus 217 ~qil~~htdEVWfl~FS~nG-kyLAsaSkD~Taiiw~v~~d~~----~kl~~tlvgh~~~V~---yi~wSPD-dryLlaC 287 (519)
T KOG0293|consen 217 WQILQDHTDEVWFLQFSHNG-KYLASASKDSTAIIWIVVYDVH----FKLKKTLVGHSQPVS---YIMWSPD-DRYLLAC 287 (519)
T ss_pred hhhHhhCCCcEEEEEEcCCC-eeEeeccCCceEEEEEEecCcc----eeeeeeeecccCceE---EEEECCC-CCeEEec
Confidence 34567799999999999999 9999999999999999865433 346788999999996 9999999 8999999
Q ss_pred eCCCcEEEEECCCCCCCCccccceeeee-cccccEeEEEEee--ecccccCCCCccceE-----------------EEEe
Q psy4579 201 SDDHTICLWDINATPKENRVIDAKTIFT-GHTAVVEDYSIHR--LILGTHTSDEQNHLL-----------------IASV 260 (368)
Q Consensus 201 s~dg~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~v~~v~~~~--~~~~~~~~d~~~~~~-----------------~~~~ 260 (368)
+.|..+.+||..++. ....+. ++...+.+.+|.| .-+.+|+.|.++..| +..+
T Consensus 288 g~~e~~~lwDv~tgd-------~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlDgn~~~~W~gvr~~~v~dl 360 (519)
T KOG0293|consen 288 GFDEVLSLWDVDTGD-------LRHLYPSGLGFSVSSCAWCPDGFRFVTGSPDRTIIMWDLDGNILGNWEGVRDPKVHDL 360 (519)
T ss_pred CchHheeeccCCcch-------hhhhcccCcCCCcceeEEccCCceeEecCCCCcEEEecCCcchhhcccccccceeEEE
Confidence 999999999999984 233332 3567888999986 456666666655554 1222
Q ss_pred ecCCccccccccccc--------------------------------------CCCCCcccccCCCCceeeeeecCccc-
Q psy4579 261 QLPNEDAQFDASNYD--------------------------------------TDKGDFGGFGSVSGKIEIEIKINHEG- 301 (368)
Q Consensus 261 ~~~~~~~~~~~~~~d--------------------------------------~~~~~~~~~~~~~~~~~~~~~~~h~~- 301 (368)
.+..+++......-| .....+.+||+....++..+. ||..
T Consensus 361 ait~Dgk~vl~v~~d~~i~l~~~e~~~dr~lise~~~its~~iS~d~k~~LvnL~~qei~LWDl~e~~lv~kY~-Ghkq~ 439 (519)
T KOG0293|consen 361 AITYDGKYVLLVTVDKKIRLYNREARVDRGLISEEQPITSFSISKDGKLALVNLQDQEIHLWDLEENKLVRKYF-GHKQG 439 (519)
T ss_pred EEcCCCcEEEEEecccceeeechhhhhhhccccccCceeEEEEcCCCcEEEEEcccCeeEEeecchhhHHHHhh-ccccc
Confidence 222222222211111 011134445555444333333 7765
Q ss_pred -ceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeecccCceeeecceeeee
Q psy4579 302 -EVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYNCYL 366 (368)
Q Consensus 302 -~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p~~~ 366 (368)
-|..-+|-...+.++||||+|+.|+||+.+. ..++..+.||...|++++|+|.-+
T Consensus 440 ~fiIrSCFgg~~~~fiaSGSED~kvyIWhr~s----------gkll~~LsGHs~~vNcVswNP~~p 495 (519)
T KOG0293|consen 440 HFIIRSCFGGGNDKFIASGSEDSKVYIWHRIS----------GKLLAVLSGHSKTVNCVSWNPADP 495 (519)
T ss_pred ceEEEeccCCCCcceEEecCCCceEEEEEccC----------CceeEeecCCcceeeEEecCCCCH
Confidence 4555677766667999999999999999976 677889999999999999999753
|
|
| >KOG0291|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.8e-22 Score=179.64 Aligned_cols=265 Identities=16% Similarity=0.234 Sum_probs=196.1
Q ss_pred ccCceeeEecCCcccccCCCCc-cccccCcceeeeccccCCCCC-cEEEEEEecCCCccccccCCcccCCCCcccCCCCC
Q psy4579 40 EWPSLTAQWLPDVTSVQLPNED-AQFDASNYDTDKGTHTSDEQN-HLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNED 117 (368)
Q Consensus 40 ~~~~~~~~~~p~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~ 117 (368)
+.|+.++.|...|+-+|.|+.. |.+.+|.|... +..-..|. ...+.++...+++..+.+. +.||+|++||..
T Consensus 307 ~~~I~t~~~N~tGDWiA~g~~klgQLlVweWqsE--sYVlKQQgH~~~i~~l~YSpDgq~iaTG----~eDgKVKvWn~~ 380 (893)
T KOG0291|consen 307 DQKILTVSFNSTGDWIAFGCSKLGQLLVWEWQSE--SYVLKQQGHSDRITSLAYSPDGQLIATG----AEDGKVKVWNTQ 380 (893)
T ss_pred cceeeEEEecccCCEEEEcCCccceEEEEEeecc--ceeeeccccccceeeEEECCCCcEEEec----cCCCcEEEEecc
Confidence 4789999999999999997665 67766766544 33334444 4568899888776655544 369999999987
Q ss_pred eee-eeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCe
Q psy4579 118 AQF-DASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGY 196 (368)
Q Consensus 118 ~~~-~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~ 196 (368)
..+ ..++..|+..|+.+.|+..| +.+++.+.||+||.||+...+ ..+++......-- .|++..|. +.+
T Consensus 381 SgfC~vTFteHts~Vt~v~f~~~g-~~llssSLDGtVRAwDlkRYr-------NfRTft~P~p~Qf--scvavD~s-Gel 449 (893)
T KOG0291|consen 381 SGFCFVTFTEHTSGVTAVQFTARG-NVLLSSSLDGTVRAWDLKRYR-------NFRTFTSPEPIQF--SCVAVDPS-GEL 449 (893)
T ss_pred CceEEEEeccCCCceEEEEEEecC-CEEEEeecCCeEEeeeecccc-------eeeeecCCCceee--eEEEEcCC-CCE
Confidence 654 55677899999999999999 999999999999999998875 3456654432211 28888887 788
Q ss_pred EEEeeCCC-cEEEEECCCCCCCCccccceeeeecccccEeEEEEee--ecccccCCCCccceEE----------------
Q psy4579 197 LLSASDDH-TICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LILGTHTSDEQNHLLI---------------- 257 (368)
Q Consensus 197 l~s~s~dg-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~d~~~~~~~---------------- 257 (368)
+..|+.|. .|.+|++.++ +.+-.+.||.++|.+++|++ ..+++++-|.++++|.
T Consensus 450 V~AG~~d~F~IfvWS~qTG-------qllDiLsGHEgPVs~l~f~~~~~~LaS~SWDkTVRiW~if~s~~~vEtl~i~sd 522 (893)
T KOG0291|consen 450 VCAGAQDSFEIFVWSVQTG-------QLLDILSGHEGPVSGLSFSPDGSLLASGSWDKTVRIWDIFSSSGTVETLEIRSD 522 (893)
T ss_pred EEeeccceEEEEEEEeecC-------eeeehhcCCCCcceeeEEccccCeEEeccccceEEEEEeeccCceeeeEeeccc
Confidence 88888776 6999999998 45678899999999999886 6899999999999993
Q ss_pred -EEeecCCcccccccccccCCCCCcccccCCCC---------------ceeeeeec----CcccceeEEEEeCCCCcEEE
Q psy4579 258 -ASVQLPNEDAQFDASNYDTDKGDFGGFGSVSG---------------KIEIEIKI----NHEGEVNRARYMPQNPCVIA 317 (368)
Q Consensus 258 -~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~---------------~~~~~~~~----~h~~~i~~~~~~p~~~~~la 317 (368)
..+.+.++++.+.+...| |.+.+|+...+ +....... +.....+.+++++||. .|.
T Consensus 523 vl~vsfrPdG~elaVaTld---gqItf~d~~~~~q~~~IdgrkD~~~gR~~~D~~ta~~sa~~K~Ftti~ySaDG~-~Il 598 (893)
T KOG0291|consen 523 VLAVSFRPDGKELAVATLD---GQITFFDIKEAVQVGSIDGRKDLSGGRKETDRITAENSAKGKTFTTICYSADGK-CIL 598 (893)
T ss_pred eeEEEEcCCCCeEEEEEec---ceEEEEEhhhceeeccccchhhccccccccceeehhhcccCCceEEEEEcCCCC-EEE
Confidence 344566666666554443 23444443332 22111111 2335789999999995 555
Q ss_pred EecCCCeEEEEECCC
Q psy4579 318 TKTPSSDVLVFDYTK 332 (368)
Q Consensus 318 sgs~Dg~i~iwd~~~ 332 (368)
+|+....|++|+++.
T Consensus 599 AgG~sn~iCiY~v~~ 613 (893)
T KOG0291|consen 599 AGGESNSICIYDVPE 613 (893)
T ss_pred ecCCcccEEEEECch
Confidence 889999999999975
|
|
| >KOG0647|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.2e-22 Score=164.63 Aligned_cols=244 Identities=16% Similarity=0.211 Sum_probs=152.7
Q ss_pred CcEEEEEEecCC-CccccccCCcccCCCCcccCCCCCe--e-eeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEe
Q psy4579 82 NHLLIASVQLPN-EDAQFDASNYDTDKGGNVQLPNEDA--Q-FDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWD 157 (368)
Q Consensus 82 ~~~~i~~~~~~~-~~~~~~~~~~~~~~~g~i~i~~~~~--~-~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd 157 (368)
....|..+.|++ ....+.++.| ||+|++|+.+. . .......|.++|.+++|+.+| ..+++|+.|+.+++||
T Consensus 26 P~DsIS~l~FSP~~~~~~~A~SW----D~tVR~wevq~~g~~~~ka~~~~~~PvL~v~Wsddg-skVf~g~~Dk~~k~wD 100 (347)
T KOG0647|consen 26 PEDSISALAFSPQADNLLAAGSW----DGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDG-SKVFSGGCDKQAKLWD 100 (347)
T ss_pred cccchheeEeccccCceEEeccc----CCceEEEEEecCCcccchhhhccCCCeEEEEEccCC-ceEEeeccCCceEEEE
Confidence 345688888866 3333445554 69999998764 2 234567899999999999999 9999999999999999
Q ss_pred CCCCCCCCcccccceeeeccccceecceeeEEeCCCCC--eEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEe
Q psy4579 158 INATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNG--YLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVE 235 (368)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~--~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~ 235 (368)
+.+++ ...+..|.++|+ ++.|-+. .. .|+|||.|.+|+.||+|... ++.++. -...++
T Consensus 101 L~S~Q--------~~~v~~Hd~pvk---t~~wv~~-~~~~cl~TGSWDKTlKfWD~R~~~-------pv~t~~-LPeRvY 160 (347)
T KOG0647|consen 101 LASGQ--------VSQVAAHDAPVK---TCHWVPG-MNYQCLVTGSWDKTLKFWDTRSSN-------PVATLQ-LPERVY 160 (347)
T ss_pred ccCCC--------eeeeeeccccee---EEEEecC-CCcceeEecccccceeecccCCCC-------eeeeee-ccceee
Confidence 99884 577889999997 8999775 44 79999999999999999863 333333 233444
Q ss_pred EEEEeeecccccCCCCccceEEEEeecCCccc-------ccc---cccccCC--------CCCcccccCCCC--ceeeee
Q psy4579 236 DYSIHRLILGTHTSDEQNHLLIASVQLPNEDA-------QFD---ASNYDTD--------KGDFGGFGSVSG--KIEIEI 295 (368)
Q Consensus 236 ~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~-------~~~---~~~~d~~--------~~~~~~~~~~~~--~~~~~~ 295 (368)
+++.-..++..+..+. .+.+..+.-+.... .+. +..+... .|.+.+..+..+ +..+.+
T Consensus 161 a~Dv~~pm~vVata~r--~i~vynL~n~~te~k~~~SpLk~Q~R~va~f~d~~~~alGsiEGrv~iq~id~~~~~~nFtF 238 (347)
T KOG0647|consen 161 AADVLYPMAVVATAER--HIAVYNLENPPTEFKRIESPLKWQTRCVACFQDKDGFALGSIEGRVAIQYIDDPNPKDNFTF 238 (347)
T ss_pred ehhccCceeEEEecCC--cEEEEEcCCCcchhhhhcCcccceeeEEEEEecCCceEeeeecceEEEEecCCCCccCceeE
Confidence 4444221111111111 22222221111000 000 0001111 111111111111 223333
Q ss_pred ecCcc---------cceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeecccCceeeecceee
Q psy4579 296 KINHE---------GEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYNC 364 (368)
Q Consensus 296 ~~~h~---------~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p~ 364 (368)
+ .|. ..|++++|+|.. ..|+|++.||+..+||-.. ...++...-|..+|.+.+|+-+
T Consensus 239 k-CHR~~~~~~~~VYaVNsi~FhP~h-gtlvTaGsDGtf~FWDkda----------r~kLk~s~~~~qpItcc~fn~~ 304 (347)
T KOG0647|consen 239 K-CHRSTNSVNDDVYAVNSIAFHPVH-GTLVTAGSDGTFSFWDKDA----------RTKLKTSETHPQPITCCSFNRN 304 (347)
T ss_pred E-EeccCCCCCCceEEecceEeeccc-ceEEEecCCceEEEecchh----------hhhhhccCcCCCccceeEecCC
Confidence 3 443 368999999987 6888999999999999864 2333444556677777776643
|
|
| >KOG0640|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=5.6e-23 Score=167.26 Aligned_cols=284 Identities=16% Similarity=0.189 Sum_probs=202.7
Q ss_pred CcchheeecccccccCceeeEecCCcccccCCCCccccccCcceeee--ccc----cCC-CCCcEE----------EEEE
Q psy4579 27 TPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDK--GTH----TSD-EQNHLL----------IASV 89 (368)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~--~~~----~~~-~~~~~~----------i~~~ 89 (368)
.|..|...+...+..|+++.+|+|||.++|+||.|..+.|.+..-.+ ..+ ..+ .+.+.+ |..+
T Consensus 99 e~~~yEt~ylt~HK~~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l 178 (430)
T KOG0640|consen 99 EPSEYETKYLTSHKSPCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDL 178 (430)
T ss_pred CCcccceEEEeecccceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccce
Confidence 35567778888889999999999999999999999998666544111 000 011 122233 4445
Q ss_pred ecCCCccccccCCcccCCCCcccCCCCCee---eeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCc
Q psy4579 90 QLPNEDAQFDASNYDTDKGGNVQLPNEDAQ---FDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENR 166 (368)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~---~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~ 166 (368)
.|.+.. .+.+++ +.|++|+++|.... .-...+.-..+|.+|+|+|.| .+|+.|....++++||+++.++-.
T Consensus 179 ~FHPre-~ILiS~---srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsG-efllvgTdHp~~rlYdv~T~Qcfv- 252 (430)
T KOG0640|consen 179 DFHPRE-TILISG---SRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSG-EFLLVGTDHPTLRLYDVNTYQCFV- 252 (430)
T ss_pred eecchh-heEEec---cCCCeEEEEecccHHHHHHHHHhhccceeeeEeecCCC-ceEEEecCCCceeEEeccceeEee-
Confidence 554433 233343 57999999997642 233445567799999999999 999999999999999999875321
Q ss_pred ccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeec-cc-ccEeEEEEee--e
Q psy4579 167 VIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTG-HT-AVVEDYSIHR--L 242 (368)
Q Consensus 167 ~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~-~~-~~v~~v~~~~--~ 242 (368)
+..--.+|++.|+ ++.+++. +++-++||.||.|+|||--.. +|+.++.. |. ..|.+..|.+ .
T Consensus 253 ---sanPd~qht~ai~---~V~Ys~t-~~lYvTaSkDG~IklwDGVS~-------rCv~t~~~AH~gsevcSa~Ftkn~k 318 (430)
T KOG0640|consen 253 ---SANPDDQHTGAIT---QVRYSST-GSLYVTASKDGAIKLWDGVSN-------RCVRTIGNAHGGSEVCSAVFTKNGK 318 (430)
T ss_pred ---ecCccccccccee---EEEecCC-ccEEEEeccCCcEEeeccccH-------HHHHHHHhhcCCceeeeEEEccCCe
Confidence 1112346899997 9999999 999999999999999997665 55666543 54 4577777863 4
Q ss_pred cccccCCCCccceEEEEee-----cCCc---c------------cccccccccCCCCCcccccCCCCceeeeeecCcccc
Q psy4579 243 ILGTHTSDEQNHLLIASVQ-----LPNE---D------------AQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGE 302 (368)
Q Consensus 243 ~~~~~~~d~~~~~~~~~~~-----~~~~---~------------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~ 302 (368)
.+.+.+.|..+++|-.+.. ..+. + ..-.+..-|..++.+..||.+++........+|++.
T Consensus 319 yiLsSG~DS~vkLWEi~t~R~l~~YtGAg~tgrq~~rtqAvFNhtEdyVl~pDEas~slcsWdaRtadr~~l~slgHn~a 398 (430)
T KOG0640|consen 319 YILSSGKDSTVKLWEISTGRMLKEYTGAGTTGRQKHRTQAVFNHTEDYVLFPDEASNSLCSWDARTADRVALLSLGHNGA 398 (430)
T ss_pred EEeecCCcceeeeeeecCCceEEEEecCCcccchhhhhhhhhcCccceEEccccccCceeeccccchhhhhhcccCCCCC
Confidence 5566667778888854321 0000 0 011123346677788889988887777676799999
Q ss_pred eeEEEEeCCCCcEEEEecCCCeEEEEECC
Q psy4579 303 VNRARYMPQNPCVIATKTPSSDVLVFDYT 331 (368)
Q Consensus 303 i~~~~~~p~~~~~lasgs~Dg~i~iwd~~ 331 (368)
+..+..+|.++ .++|||.|-.+|+|-.+
T Consensus 399 ~R~i~HSP~~p-~FmTcsdD~raRFWyrr 426 (430)
T KOG0640|consen 399 VRWIVHSPVEP-AFMTCSDDFRARFWYRR 426 (430)
T ss_pred ceEEEeCCCCC-ceeeecccceeeeeeec
Confidence 99999999996 66699999999999875
|
|
| >KOG0306|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.4e-22 Score=182.31 Aligned_cols=262 Identities=16% Similarity=0.167 Sum_probs=192.4
Q ss_pred ceeeEecCCcccccCCCCccccccCcceeeeccccCCCCCcEEEEEEecCCCccccccCCcccCCCCcccCCCCCe-eee
Q psy4579 43 SLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDA-QFD 121 (368)
Q Consensus 43 ~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~-~~~ 121 (368)
|++++++.|...+++|+.+ .+++|+-+ ++.+..+......+++..+|. +..+..+. +.|.+.++++-. ..+
T Consensus 376 VRsl~vS~d~~~~~Sga~~-SikiWn~~--t~kciRTi~~~y~l~~~Fvpg-d~~Iv~G~----k~Gel~vfdlaS~~l~ 447 (888)
T KOG0306|consen 376 VRSLCVSSDSILLASGAGE-SIKIWNRD--TLKCIRTITCGYILASKFVPG-DRYIVLGT----KNGELQVFDLASASLV 447 (888)
T ss_pred eeEEEeecCceeeeecCCC-cEEEEEcc--CcceeEEeccccEEEEEecCC-CceEEEec----cCCceEEEEeehhhhh
Confidence 7788888888887776544 55566544 333444433333344444454 43333322 589999999764 445
Q ss_pred eccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCC----CCccc--ccceeeeccccceecceeeEEeCCCCC
Q psy4579 122 ASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPK----ENRVI--DAKTIFTGHTAVVEVRYGLSWNPSLNG 195 (368)
Q Consensus 122 ~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~----~~~~~--~~~~~~~~h~~~v~~~~~i~~~p~~~~ 195 (368)
.....|+++|++++.+|++ ..+++||.|.+|++||..--.. +.+.+ +..+++. -+..| +|+++||+ +.
T Consensus 448 Eti~AHdgaIWsi~~~pD~-~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLe-l~ddv---L~v~~Spd-gk 521 (888)
T KOG0306|consen 448 ETIRAHDGAIWSISLSPDN-KGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLE-LEDDV---LCVSVSPD-GK 521 (888)
T ss_pred hhhhccccceeeeeecCCC-CceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEEe-ccccE---EEEEEcCC-Cc
Confidence 5667899999999999998 9999999999999999753211 11100 0111222 23445 59999999 99
Q ss_pred eEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee--ecccccCCCCccceEEEEeecCCccccccccc
Q psy4579 196 YLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LILGTHTSDEQNHLLIASVQLPNEDAQFDASN 273 (368)
Q Consensus 196 ~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 273 (368)
+|+.+=-|.+|+||-+.+. .-..++-||.-+|.|++.++ .++.+++.|+.+++|-..
T Consensus 522 ~LaVsLLdnTVkVyflDtl-------KFflsLYGHkLPV~smDIS~DSklivTgSADKnVKiWGLd-------------- 580 (888)
T KOG0306|consen 522 LLAVSLLDNTVKVYFLDTL-------KFFLSLYGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLD-------------- 580 (888)
T ss_pred EEEEEeccCeEEEEEecce-------eeeeeecccccceeEEeccCCcCeEEeccCCCceEEeccc--------------
Confidence 9999999999999998885 33567789999999998875 678888888888876433
Q ss_pred ccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeeccc
Q psy4579 274 YDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQ 353 (368)
Q Consensus 274 ~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~ 353 (368)
-|.+...+. +|++.|.++.|.|.. .++.|+|.|+.|+.||-.+ ...+..+.||.
T Consensus 581 --------------FGDCHKS~f-AHdDSvm~V~F~P~~-~~FFt~gKD~kvKqWDg~k----------Fe~iq~L~~H~ 634 (888)
T KOG0306|consen 581 --------------FGDCHKSFF-AHDDSVMSVQFLPKT-HLFFTCGKDGKVKQWDGEK----------FEEIQKLDGHH 634 (888)
T ss_pred --------------cchhhhhhh-cccCceeEEEEcccc-eeEEEecCcceEEeechhh----------hhhheeeccch
Confidence 244444454 899999999999987 6777999999999999865 66777899999
Q ss_pred Cceeeecceeee
Q psy4579 354 KEGLIEGTYNCY 365 (368)
Q Consensus 354 ~~V~~l~w~p~~ 365 (368)
..|++++-+||.
T Consensus 635 ~ev~cLav~~~G 646 (888)
T KOG0306|consen 635 SEVWCLAVSPNG 646 (888)
T ss_pred heeeeeEEcCCC
Confidence 999999999984
|
|
| >KOG0643|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.5e-22 Score=160.23 Aligned_cols=277 Identities=10% Similarity=0.155 Sum_probs=195.1
Q ss_pred cccccCceeeEecCCcccccCCCCccccccCcceeeeccccCC-CCCcEEEEEEecCCCccccccCCcccCCCCcccCCC
Q psy4579 37 HALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSD-EQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPN 115 (368)
Q Consensus 37 ~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~ 115 (368)
.-++-|+.-++|..+|.+|-+++.|....+ |....|....+ +...-.|.++.+......+... ++|.++++||
T Consensus 7 ~GHERplTqiKyN~eGDLlFscaKD~~~~v--w~s~nGerlGty~GHtGavW~~Did~~s~~liTG----SAD~t~kLWD 80 (327)
T KOG0643|consen 7 QGHERPLTQIKYNREGDLLFSCAKDSTPTV--WYSLNGERLGTYDGHTGAVWCCDIDWDSKHLITG----SADQTAKLWD 80 (327)
T ss_pred ccCccccceEEecCCCcEEEEecCCCCceE--EEecCCceeeeecCCCceEEEEEecCCcceeeec----cccceeEEEE
Confidence 347789999999999999999999998844 45566777666 3334468888886655544433 4799999999
Q ss_pred CCeeeeeccccCCCCceeeEecCCCCCeeEEEe-----CCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEe
Q psy4579 116 EDAQFDASNYDTDKGGYGLSWNPSLNGYLLSAS-----DDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWN 190 (368)
Q Consensus 116 ~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~-----~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~ 190 (368)
.+...+........+|..+.|+++| ++++... ..+.|.++|++.........+|...+..+.+.++ ..-|.
T Consensus 81 v~tGk~la~~k~~~~Vk~~~F~~~g-n~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit---~a~Wg 156 (327)
T KOG0643|consen 81 VETGKQLATWKTNSPVKRVDFSFGG-NLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKIT---SALWG 156 (327)
T ss_pred cCCCcEEEEeecCCeeEEEeeccCC-cEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCcccee---eeeec
Confidence 9987777778888999999999998 6555543 3467999999865433333346777888888886 89999
Q ss_pred CCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee--ecccccCCCCccceEEEEe--------
Q psy4579 191 PSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LILGTHTSDEQNHLLIASV-------- 260 (368)
Q Consensus 191 p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~d~~~~~~~~~~-------- 260 (368)
|- +..|++|..||.|.+||++++. ..+.+...|...|+++.+++ ..+.+++.|.+.+++....
T Consensus 157 ~l-~~~ii~Ghe~G~is~~da~~g~------~~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl~v~Kty~ 229 (327)
T KOG0643|consen 157 PL-GETIIAGHEDGSISIYDARTGK------ELVDSDEEHSSKINDLQFSRDRTYFITGSKDTTAKLVDVRTLEVLKTYT 229 (327)
T ss_pred cc-CCEEEEecCCCcEEEEEcccCc------eeeechhhhccccccccccCCcceEEecccCccceeeeccceeeEEEee
Confidence 98 9999999999999999999974 23445566888999999986 5678888888877774321
Q ss_pred --------ecCCc---------ccccccccccCCCCCc--ccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecC
Q psy4579 261 --------QLPNE---------DAQFDASNYDTDKGDF--GGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTP 321 (368)
Q Consensus 261 --------~~~~~---------~~~~~~~~~d~~~~~~--~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~ 321 (368)
.+.+- ....++..-..+.|.+ +.++....+.+-.. .+|-++|++++|+|+| ...+||++
T Consensus 230 te~PvN~aaisP~~d~VilgGGqeA~dVTTT~~r~GKFEArFyh~i~eEEigrv-kGHFGPINsvAfhPdG-ksYsSGGE 307 (327)
T KOG0643|consen 230 TERPVNTAAISPLLDHVILGGGQEAMDVTTTSTRAGKFEARFYHLIFEEEIGRV-KGHFGPINSVAFHPDG-KSYSSGGE 307 (327)
T ss_pred ecccccceecccccceEEecCCceeeeeeeecccccchhhhHHHHHHHHHhccc-cccccCcceeEECCCC-cccccCCC
Confidence 00010 0000111111111110 01111111111122 3899999999999999 67889999
Q ss_pred CCeEEEEECCC
Q psy4579 322 SSDVLVFDYTK 332 (368)
Q Consensus 322 Dg~i~iwd~~~ 332 (368)
||.||+.-+.+
T Consensus 308 DG~VR~h~Fd~ 318 (327)
T KOG0643|consen 308 DGYVRLHHFDS 318 (327)
T ss_pred CceEEEEEecc
Confidence 99999987754
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=7.4e-22 Score=194.62 Aligned_cols=255 Identities=16% Similarity=0.215 Sum_probs=175.7
Q ss_pred cCceeeEecCC-cccccCCCCccccccCcceeeeccccCCC-CCcEEEEEEecCCCccccccCCcccCCCCcccCCCCCe
Q psy4579 41 WPSLTAQWLPD-VTSVQLPNEDAQFDASNYDTDKGTHTSDE-QNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDA 118 (368)
Q Consensus 41 ~~~~~~~~~p~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~ 118 (368)
-++.++.|+|. +..|++++.||.+++|+.. .+...... .....|.++.+.+.+....+++ +.||.|++|+...
T Consensus 533 ~~v~~l~~~~~~~~~las~~~Dg~v~lWd~~--~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sg---s~Dg~v~iWd~~~ 607 (793)
T PLN00181 533 SKLSGICWNSYIKSQVASSNFEGVVQVWDVA--RSQLVTEMKEHEKRVWSIDYSSADPTLLASG---SDDGSVKLWSINQ 607 (793)
T ss_pred CceeeEEeccCCCCEEEEEeCCCeEEEEECC--CCeEEEEecCCCCCEEEEEEcCCCCCEEEEE---cCCCEEEEEECCC
Confidence 46788999875 7889999999999777543 33322221 2224578888854333333332 3589999999875
Q ss_pred eeeeccccCCCCceeeEecC-CCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeE
Q psy4579 119 QFDASNYDTDKGGYGLSWNP-SLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYL 197 (368)
Q Consensus 119 ~~~~~~~~h~~~v~~l~~sp-~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l 197 (368)
........+...|.++.|++ ++ .+|++|+.||.|++||+++... +...+.+|...|. ++.|. + +.+|
T Consensus 608 ~~~~~~~~~~~~v~~v~~~~~~g-~~latgs~dg~I~iwD~~~~~~------~~~~~~~h~~~V~---~v~f~-~-~~~l 675 (793)
T PLN00181 608 GVSIGTIKTKANICCVQFPSESG-RSLAFGSADHKVYYYDLRNPKL------PLCTMIGHSKTVS---YVRFV-D-SSTL 675 (793)
T ss_pred CcEEEEEecCCCeEEEEEeCCCC-CEEEEEeCCCeEEEEECCCCCc------cceEecCCCCCEE---EEEEe-C-CCEE
Confidence 43333334557899999965 55 8999999999999999986532 3567789999996 99997 4 7899
Q ss_pred EEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee--ecccccCCCCccceEEEEeecCCccccccccccc
Q psy4579 198 LSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LILGTHTSDEQNHLLIASVQLPNEDAQFDASNYD 275 (368)
Q Consensus 198 ~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d 275 (368)
++++.|++|++||++...... ...++..+.+|...+++++|++ .++++++.|+.+.+|...... .. ..+.
T Consensus 676 vs~s~D~~ikiWd~~~~~~~~-~~~~l~~~~gh~~~i~~v~~s~~~~~lasgs~D~~v~iw~~~~~~-----~~--~s~~ 747 (793)
T PLN00181 676 VSSSTDNTLKLWDLSMSISGI-NETPLHSFMGHTNVKNFVGLSVSDGYIATGSETNEVFVYHKAFPM-----PV--LSYK 747 (793)
T ss_pred EEEECCCEEEEEeCCCCcccc-CCcceEEEcCCCCCeeEEEEcCCCCEEEEEeCCCEEEEEECCCCC-----ce--EEEe
Confidence 999999999999997542110 1135678889999999999975 577888888777776532110 00 0000
Q ss_pred CCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEEC
Q psy4579 276 TDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDY 330 (368)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~ 330 (368)
... .+...+ ... ..|...|.+++|+|++ ..|++|+.||+|+||++
T Consensus 748 ~~~-----~~~~~~---~~~-~~~~~~V~~v~ws~~~-~~lva~~~dG~I~i~~~ 792 (793)
T PLN00181 748 FKT-----IDPVSG---LEV-DDASQFISSVCWRGQS-STLVAANSTGNIKILEM 792 (793)
T ss_pred ccc-----CCcccc---ccc-CCCCcEEEEEEEcCCC-CeEEEecCCCcEEEEec
Confidence 000 000000 011 2466789999999999 57789999999999996
|
|
| >KOG0641|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=9.6e-22 Score=153.41 Aligned_cols=251 Identities=17% Similarity=0.206 Sum_probs=173.1
Q ss_pred cccccCceeeEecCCcccccCCCCccccccCcceeeeccccCCCC----CcEEEEEEec---CCCccccccCCcccCCCC
Q psy4579 37 HALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQ----NHLLIASVQL---PNEDAQFDASNYDTDKGG 109 (368)
Q Consensus 37 ~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~i~~~~~---~~~~~~~~~~~~~~~~~g 109 (368)
..+...+.|.+|+|+|+.+++|+.|+++.+-.++..+-..+.-+. ..-.|..+.| |+....+.+++ .++|.
T Consensus 86 khhkgsiyc~~ws~~geliatgsndk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~--gagdc 163 (350)
T KOG0641|consen 86 KHHKGSIYCTAWSPCGELIATGSNDKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASA--GAGDC 163 (350)
T ss_pred cccCccEEEEEecCccCeEEecCCCceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEec--CCCcc
Confidence 345678999999999999999999999977666655433332211 1123555555 55555555443 23455
Q ss_pred cccCCCCC-eeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeec---cccceecce
Q psy4579 110 NVQLPNED-AQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTG---HTAVVEVRY 185 (368)
Q Consensus 110 ~i~i~~~~-~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~---h~~~v~~~~ 185 (368)
+|.+-+.. ++-...+.+|.+.|.++ ++-++ -++++|+.|.+|++||++-..+... .-..+.+ .++.|.
T Consensus 164 ~iy~tdc~~g~~~~a~sghtghilal-yswn~-~m~~sgsqdktirfwdlrv~~~v~~---l~~~~~~~glessava--- 235 (350)
T KOG0641|consen 164 KIYITDCGRGQGFHALSGHTGHILAL-YSWNG-AMFASGSQDKTIRFWDLRVNSCVNT---LDNDFHDGGLESSAVA--- 235 (350)
T ss_pred eEEEeecCCCCcceeecCCcccEEEE-EEecC-cEEEccCCCceEEEEeeeccceeee---ccCcccCCCcccceeE---
Confidence 66665553 45567788999999886 23345 8999999999999999986542111 0011221 124554
Q ss_pred eeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee--ecccccCCCCccceEEEEeecC
Q psy4579 186 GLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LILGTHTSDEQNHLLIASVQLP 263 (368)
Q Consensus 186 ~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~d~~~~~~~~~~~~~ 263 (368)
+++..|. +.+|++|-.|.+..+||++.+ +++..+..|...|.++.|+| ..+.+++-|..+++-.....+
T Consensus 236 av~vdps-grll~sg~~dssc~lydirg~-------r~iq~f~phsadir~vrfsp~a~yllt~syd~~ikltdlqgdl- 306 (350)
T KOG0641|consen 236 AVAVDPS-GRLLASGHADSSCMLYDIRGG-------RMIQRFHPHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQGDL- 306 (350)
T ss_pred EEEECCC-cceeeeccCCCceEEEEeeCC-------ceeeeeCCCccceeEEEeCCCceEEEEecccceEEEeecccch-
Confidence 8999999 999999999999999999998 66788999999999999997 445555554444432222110
Q ss_pred CcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECC
Q psy4579 264 NEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYT 331 (368)
Q Consensus 264 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~ 331 (368)
..++.+.....|...+..+.|+|.. .-+++.|.|.++.+|-+.
T Consensus 307 ------------------------a~el~~~vv~ehkdk~i~~rwh~~d-~sfisssadkt~tlwa~~ 349 (350)
T KOG0641|consen 307 ------------------------AHELPIMVVAEHKDKAIQCRWHPQD-FSFISSSADKTATLWALN 349 (350)
T ss_pred ------------------------hhcCceEEEEeccCceEEEEecCcc-ceeeeccCcceEEEeccC
Confidence 1222233333799999999999998 566688999999999874
|
|
| >KOG0313|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.4e-22 Score=168.94 Aligned_cols=216 Identities=17% Similarity=0.208 Sum_probs=166.6
Q ss_pred cCCCCcccCCCCCeeeeeccccCCCCceeeEecCCC--CCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeecccccee
Q psy4579 105 TDKGGNVQLPNEDAQFDASNYDTDKGGYGLSWNPSL--NGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVE 182 (368)
Q Consensus 105 ~~~~g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~--~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~ 182 (368)
.+.||.+++|+..++......+|.++|.+++|--.+ ...|++++.|.++++|..+.+....+ ..+.-+||.+.|.
T Consensus 121 gsYDg~~riWd~~Gk~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~~~~~~~~---~~~~~~GHk~~V~ 197 (423)
T KOG0313|consen 121 GSYDGTSRIWDLKGKSIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLWKWNVGENKVK---ALKVCRGHKRSVD 197 (423)
T ss_pred eecCCeeEEEecCCceEEEEecCCcceeeeEEEecCCccceEEEecCCceEEEEEecCchhhhh---HHhHhccccccee
Confidence 357899999999999999999999999988886433 13699999999999999987654322 3344559999997
Q ss_pred cceeeEEeCCCCCeEEEeeCCCcEEEEECCCCC------------------CCCccccceeeeecccccEeEEEEeee-c
Q psy4579 183 VRYGLSWNPSLNGYLLSASDDHTICLWDINATP------------------KENRVIDAKTIFTGHTAVVEDYSIHRL-I 243 (368)
Q Consensus 183 ~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~------------------~~~~~~~~~~~~~~~~~~v~~v~~~~~-~ 243 (368)
+++..++ +..++|||.|.+|+||+..+.. +....-.|+..+.||+.+|.+|.|.+. .
T Consensus 198 ---sVsv~~s-gtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~d~~v 273 (423)
T KOG0313|consen 198 ---SVSVDSS-GTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVWSDATV 273 (423)
T ss_pred ---EEEecCC-CCeEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecccccceeeEEEcCCCc
Confidence 9999998 9999999999999999933211 011123567789999999999999752 2
Q ss_pred ccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCC
Q psy4579 244 LGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSS 323 (368)
Q Consensus 244 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg 323 (368)
..+++ ||. .+..||+.++.....+. ....++++..+|.. .+||+||.|.
T Consensus 274 ~yS~S-------------------------wDH---TIk~WDletg~~~~~~~--~~ksl~~i~~~~~~-~Ll~~gssdr 322 (423)
T KOG0313|consen 274 IYSVS-------------------------WDH---TIKVWDLETGGLKSTLT--TNKSLNCISYSPLS-KLLASGSSDR 322 (423)
T ss_pred eEeec-------------------------ccc---eEEEEEeecccceeeee--cCcceeEeeccccc-ceeeecCCCC
Confidence 22222 322 24556666676666554 56789999999988 7999999999
Q ss_pred eEEEEECCCCCCCCCCCCCCCCceeeecccCceeeecceeee
Q psy4579 324 DVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 324 ~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p~~ 365 (368)
.|++||.|... .......|.||++-|.++.|+|..
T Consensus 323 ~irl~DPR~~~-------gs~v~~s~~gH~nwVssvkwsp~~ 357 (423)
T KOG0313|consen 323 HIRLWDPRTGD-------GSVVSQSLIGHKNWVSSVKWSPTN 357 (423)
T ss_pred ceeecCCCCCC-------CceeEEeeecchhhhhheecCCCC
Confidence 99999999732 245566889999999999999864
|
|
| >KOG0973|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=6.3e-22 Score=185.19 Aligned_cols=267 Identities=16% Similarity=0.251 Sum_probs=180.8
Q ss_pred hhhhhhhhhhcCcchheeecccccccCceeeEecCCcccccCCCCccccccCcceeeeccccCCCCCcEEEEEEecCCCc
Q psy4579 16 INEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNED 95 (368)
Q Consensus 16 ~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 95 (368)
+.++-+.|+.+.|.+.-.+..| ..++.|+.|+|||++||+||+|+.+.+|.+.. .|.. .+ +...+
T Consensus 47 vl~~~~~~~~~l~k~l~~m~~h--~~sv~CVR~S~dG~~lAsGSDD~~v~iW~~~~-~~~~-----------~~-fgs~g 111 (942)
T KOG0973|consen 47 VLDEKEEKNENLPKHLCTMDDH--DGSVNCVRFSPDGSYLASGSDDRLVMIWERAE-IGSG-----------TV-FGSTG 111 (942)
T ss_pred ccchhhhhhcccchhheeeccc--cCceeEEEECCCCCeEeeccCcceEEEeeecc-cCCc-----------cc-ccccc
Confidence 4555556666666655555554 56899999999999999999999988886543 1100 00 00000
Q ss_pred cccccCCcccCCCCcccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeee
Q psy4579 96 AQFDASNYDTDKGGNVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFT 175 (368)
Q Consensus 96 ~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~ 175 (368)
+-..+.-| +....+.+|...|..++|+|++ .+||+++.|++|.||+..+.. ....+.
T Consensus 112 -----------~~~~vE~w----k~~~~l~~H~~DV~Dv~Wsp~~-~~lvS~s~DnsViiwn~~tF~-------~~~vl~ 168 (942)
T KOG0973|consen 112 -----------GAKNVESW----KVVSILRGHDSDVLDVNWSPDD-SLLVSVSLDNSVIIWNAKTFE-------LLKVLR 168 (942)
T ss_pred -----------ccccccee----eEEEEEecCCCccceeccCCCc-cEEEEecccceEEEEccccce-------eeeeee
Confidence 01112122 3456677899999999999998 999999999999999999873 678999
Q ss_pred ccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCC-------------------------------------
Q psy4579 176 GHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKEN------------------------------------- 218 (368)
Q Consensus 176 ~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~------------------------------------- 218 (368)
+|.+.|. .+.|.|- +++|||-+.|++|++|++..-....
T Consensus 169 ~H~s~VK---Gvs~DP~-Gky~ASqsdDrtikvwrt~dw~i~k~It~pf~~~~~~T~f~RlSWSPDG~~las~nA~n~~~ 244 (942)
T KOG0973|consen 169 GHQSLVK---GVSWDPI-GKYFASQSDDRTLKVWRTSDWGIEKSITKPFEESPLTTFFLRLSWSPDGHHLASPNAVNGGK 244 (942)
T ss_pred ccccccc---ceEECCc-cCeeeeecCCceEEEEEcccceeeEeeccchhhCCCcceeeecccCCCcCeecchhhccCCc
Confidence 9999997 9999999 9999999999999999965521110
Q ss_pred --------ccccceeeeecccccEeEEEEeeecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCc
Q psy4579 219 --------RVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGK 290 (368)
Q Consensus 219 --------~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 290 (368)
..|..-..+.||..++.++.|+|.++--...++...- ....+.+.+....++.+.+|.....+
T Consensus 245 ~~~~IieR~tWk~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~---------~~~~y~i~AvgSqDrSlSVW~T~~~R 315 (942)
T KOG0973|consen 245 STIAIIERGTWKVDKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQ---------PNCYYCIAAVGSQDRSLSVWNTALPR 315 (942)
T ss_pred ceeEEEecCCceeeeeeecCCCceEEEEeChHHhccccccCCccC---------CCcceEEEEEecCCccEEEEecCCCC
Confidence 1123344577899999999998744322211111100 00011111222334445556555555
Q ss_pred eeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCC
Q psy4579 291 IEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHP 334 (368)
Q Consensus 291 ~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~ 334 (368)
+.+....--...|..++|+|+| ..|..+|.||+|.+..+....
T Consensus 316 Pl~vi~~lf~~SI~DmsWspdG-~~LfacS~DGtV~~i~Fee~E 358 (942)
T KOG0973|consen 316 PLFVIHNLFNKSIVDMSWSPDG-FSLFACSLDGTVALIHFEEKE 358 (942)
T ss_pred chhhhhhhhcCceeeeeEcCCC-CeEEEEecCCeEEEEEcchHH
Confidence 5544433346789999999999 555578999999999987543
|
|
| >KOG0316|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=6.2e-22 Score=155.27 Aligned_cols=211 Identities=14% Similarity=0.196 Sum_probs=166.1
Q ss_pred EEEEecCCCccccccCCcccCCCCcccCCCCC-eeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCC
Q psy4579 86 IASVQLPNEDAQFDASNYDTDKGGNVQLPNED-AQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKE 164 (368)
Q Consensus 86 i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~-~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~ 164 (368)
|..+.+...+.-..+. ..|.+|++||.. +..+.+..+|...|..++.+.++ ..|++|+.|..|.+||+++++
T Consensus 20 V~avryN~dGnY~ltc----GsdrtvrLWNp~rg~liktYsghG~EVlD~~~s~Dn-skf~s~GgDk~v~vwDV~TGk-- 92 (307)
T KOG0316|consen 20 VRAVRYNVDGNYCLTC----GSDRTVRLWNPLRGALIKTYSGHGHEVLDAALSSDN-SKFASCGGDKAVQVWDVNTGK-- 92 (307)
T ss_pred eEEEEEccCCCEEEEc----CCCceEEeecccccceeeeecCCCceeeeccccccc-cccccCCCCceEEEEEcccCe--
Confidence 4455554433333332 358899999975 56777888999999999999998 899999999999999999986
Q ss_pred CcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeeecc
Q psy4579 165 NRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLIL 244 (368)
Q Consensus 165 ~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~ 244 (368)
..+.+++|.+.|+ .++|+.+ ...+++||.|.++++||.|.... +|+..+....+.|.++......+
T Consensus 93 -----v~Rr~rgH~aqVN---tV~fNee-sSVv~SgsfD~s~r~wDCRS~s~-----ePiQildea~D~V~Si~v~~heI 158 (307)
T KOG0316|consen 93 -----VDRRFRGHLAQVN---TVRFNEE-SSVVASGSFDSSVRLWDCRSRSF-----EPIQILDEAKDGVSSIDVAEHEI 158 (307)
T ss_pred -----eeeecccccceee---EEEecCc-ceEEEeccccceeEEEEcccCCC-----CccchhhhhcCceeEEEecccEE
Confidence 5688999999997 9999988 99999999999999999988653 56778888888999999988777
Q ss_pred cccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCe
Q psy4579 245 GTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSD 324 (368)
Q Consensus 245 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~ 324 (368)
..++.|++.+.+..+ .|..... .-..+|++++|+++++..| .++.|++
T Consensus 159 vaGS~DGtvRtydiR----------------------------~G~l~sD---y~g~pit~vs~s~d~nc~L-a~~l~st 206 (307)
T KOG0316|consen 159 VAGSVDGTVRTYDIR----------------------------KGTLSSD---YFGHPITSVSFSKDGNCSL-ASSLDST 206 (307)
T ss_pred EeeccCCcEEEEEee----------------------------cceeehh---hcCCcceeEEecCCCCEEE-Eeeccce
Confidence 777777766654433 2322222 2346899999999996666 6689999
Q ss_pred EEEEECCCCCCCCCCCCCCCCceeeecccCceeee
Q psy4579 325 VLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIE 359 (368)
Q Consensus 325 i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l 359 (368)
+++-|..+ .+.+..++||.+.-|.+
T Consensus 207 lrLlDk~t----------GklL~sYkGhkn~eykl 231 (307)
T KOG0316|consen 207 LRLLDKET----------GKLLKSYKGHKNMEYKL 231 (307)
T ss_pred eeecccch----------hHHHHHhcccccceeee
Confidence 99999875 45556788888765544
|
|
| >KOG1036|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=8.5e-22 Score=160.29 Aligned_cols=242 Identities=16% Similarity=0.119 Sum_probs=168.8
Q ss_pred cEEEEEEecCCCccccccCCcccCCCCcccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCC
Q psy4579 83 HLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATP 162 (368)
Q Consensus 83 ~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~ 162 (368)
...|+++.|.+....+.++.| ||++++|+.........+.|..++.+++|.++ ..+++|+.||.|+.+|++++.
T Consensus 13 ~d~IS~v~f~~~~~~LLvssW----DgslrlYdv~~~~l~~~~~~~~plL~c~F~d~--~~~~~G~~dg~vr~~Dln~~~ 86 (323)
T KOG1036|consen 13 EDGISSVKFSPSSSDLLVSSW----DGSLRLYDVPANSLKLKFKHGAPLLDCAFADE--STIVTGGLDGQVRRYDLNTGN 86 (323)
T ss_pred hhceeeEEEcCcCCcEEEEec----cCcEEEEeccchhhhhheecCCceeeeeccCC--ceEEEeccCceEEEEEecCCc
Confidence 456888998766666666666 58999999988877778889999999999985 689999999999999999874
Q ss_pred CCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeee
Q psy4579 163 KENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRL 242 (368)
Q Consensus 163 ~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~ 242 (368)
...+..|..+++ ||.+++. .+.+++||+|++|++||.++... ...+. ....|.+++....
T Consensus 87 --------~~~igth~~~i~---ci~~~~~-~~~vIsgsWD~~ik~wD~R~~~~-------~~~~d-~~kkVy~~~v~g~ 146 (323)
T KOG1036|consen 87 --------EDQIGTHDEGIR---CIEYSYE-VGCVISGSWDKTIKFWDPRNKVV-------VGTFD-QGKKVYCMDVSGN 146 (323)
T ss_pred --------ceeeccCCCceE---EEEeecc-CCeEEEcccCccEEEEecccccc-------ccccc-cCceEEEEeccCC
Confidence 467788999997 9999998 88999999999999999997422 22232 3347888888766
Q ss_pred cccccCCCCccceEEEEee-------------------cCCcccccccccccCCCCCccc--ccCC--CCceeeeeecCc
Q psy4579 243 ILGTHTSDEQNHLLIASVQ-------------------LPNEDAQFDASNYDTDKGDFGG--FGSV--SGKIEIEIKINH 299 (368)
Q Consensus 243 ~~~~~~~d~~~~~~~~~~~-------------------~~~~~~~~~~~~~d~~~~~~~~--~~~~--~~~~~~~~~~~h 299 (368)
.+..++.+..+.+|..+.. +-++..-+.+...|. .+.. ++.. ..+....++ .|
T Consensus 147 ~LvVg~~~r~v~iyDLRn~~~~~q~reS~lkyqtR~v~~~pn~eGy~~sSieG---RVavE~~d~s~~~~skkyaFk-CH 222 (323)
T KOG1036|consen 147 RLVVGTSDRKVLIYDLRNLDEPFQRRESSLKYQTRCVALVPNGEGYVVSSIEG---RVAVEYFDDSEEAQSKKYAFK-CH 222 (323)
T ss_pred EEEEeecCceEEEEEcccccchhhhccccceeEEEEEEEecCCCceEEEeecc---eEEEEccCCchHHhhhceeEE-ee
Confidence 5555555555666543211 111111111111111 1111 1111 112223333 44
Q ss_pred c---------cceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeecccCceeeecceeee
Q psy4579 300 E---------GEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 300 ~---------~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p~~ 365 (368)
. .+|++++|+|-. ..||||+.||.|.+||+.. .+.+..+.+....|-+++|+-+.
T Consensus 223 r~~~~~~~~~yPVNai~Fhp~~-~tfaTgGsDG~V~~Wd~~~----------rKrl~q~~~~~~SI~slsfs~dG 286 (323)
T KOG1036|consen 223 RLSEKDTEIIYPVNAIAFHPIH-GTFATGGSDGIVNIWDLFN----------RKRLKQLAKYETSISSLSFSMDG 286 (323)
T ss_pred ecccCCceEEEEeceeEecccc-ceEEecCCCceEEEccCcc----------hhhhhhccCCCCceEEEEeccCC
Confidence 3 389999999997 6899999999999999964 34455566666677788877543
|
|
| >KOG0283|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.8e-22 Score=181.46 Aligned_cols=188 Identities=21% Similarity=0.361 Sum_probs=142.7
Q ss_pred cCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCC---------------------------CC-----C--------
Q psy4579 126 DTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATP---------------------------KE-----N-------- 165 (368)
Q Consensus 126 ~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~---------------------------~~-----~-------- 165 (368)
.|+++|+++.|+++| ++||+||.|+.|+||.+.... .. .
T Consensus 265 ah~gaIw~mKFS~DG-KyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~~~~~ 343 (712)
T KOG0283|consen 265 AHKGAIWAMKFSHDG-KYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSSRKGS 343 (712)
T ss_pred ccCCcEEEEEeCCCC-ceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCcccccccccccccccccccc
Confidence 799999999999999 999999999999999986600 00 0
Q ss_pred -------------cccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccc
Q psy4579 166 -------------RVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTA 232 (368)
Q Consensus 166 -------------~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 232 (368)
-.-+|.+.+.||.+.| ++|.|+. +++|+|+|.|.+|+||++... .++..|. |.+
T Consensus 344 ~s~~~~~p~~~f~f~ekP~~ef~GHt~DI---LDlSWSK--n~fLLSSSMDKTVRLWh~~~~-------~CL~~F~-Hnd 410 (712)
T KOG0283|consen 344 QSPCVLLPLKAFVFSEKPFCEFKGHTADI---LDLSWSK--NNFLLSSSMDKTVRLWHPGRK-------ECLKVFS-HND 410 (712)
T ss_pred CCccccCCCccccccccchhhhhccchhh---eeccccc--CCeeEeccccccEEeecCCCc-------ceeeEEe-cCC
Confidence 0013677899999999 6999997 789999999999999999887 6788887 999
Q ss_pred cEeEEEEee---ecccccCCCCccceEE----------------EEeecCCcccccccccccCCCCCcccccCCCCceee
Q psy4579 233 VVEDYSIHR---LILGTHTSDEQNHLLI----------------ASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEI 293 (368)
Q Consensus 233 ~v~~v~~~~---~~~~~~~~d~~~~~~~----------------~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 293 (368)
.|+||+|+| .++.+|+-|+.+++|- ..+++.++++...+..|+ |.+.+++...-+...
T Consensus 411 fVTcVaFnPvDDryFiSGSLD~KvRiWsI~d~~Vv~W~Dl~~lITAvcy~PdGk~avIGt~~---G~C~fY~t~~lk~~~ 487 (712)
T KOG0283|consen 411 FVTCVAFNPVDDRYFISGSLDGKVRLWSISDKKVVDWNDLRDLITAVCYSPDGKGAVIGTFN---GYCRFYDTEGLKLVS 487 (712)
T ss_pred eeEEEEecccCCCcEeecccccceEEeecCcCeeEeehhhhhhheeEEeccCCceEEEEEec---cEEEEEEccCCeEEE
Confidence 999999998 6899999999999993 344555554444444443 224444444333333
Q ss_pred eeec--------CcccceeEEEEeCCCCc-EEEEecCCCeEEEEECCC
Q psy4579 294 EIKI--------NHEGEVNRARYMPQNPC-VIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 294 ~~~~--------~h~~~i~~~~~~p~~~~-~lasgs~Dg~i~iwd~~~ 332 (368)
...+ .|. .|+.++|.|..+. +|+| +.|..|||+|.+.
T Consensus 488 ~~~I~~~~~Kk~~~~-rITG~Q~~p~~~~~vLVT-SnDSrIRI~d~~~ 533 (712)
T KOG0283|consen 488 DFHIRLHNKKKKQGK-RITGLQFFPGDPDEVLVT-SNDSRIRIYDGRD 533 (712)
T ss_pred eeeEeeccCccccCc-eeeeeEecCCCCCeEEEe-cCCCceEEEeccc
Confidence 2221 233 7999999997654 6655 8999999999965
|
|
| >KOG0296|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.6e-21 Score=160.71 Aligned_cols=288 Identities=13% Similarity=0.094 Sum_probs=198.1
Q ss_pred hhhhhcCcchheeecccccccCceeeEecCCcccccCCCCccccccCcceeeeccccCCC-CCcEEEEEEecCCCccccc
Q psy4579 21 KIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDE-QNHLLIASVQLPNEDAQFD 99 (368)
Q Consensus 21 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~ 99 (368)
-+|+.++.-..-.+ .-+.-.|.++.|+.||++||+|.-+|.+.+| +...|...... +.-.-|.=+.|.+ ...+.
T Consensus 89 flW~~~~ge~~~el--tgHKDSVt~~~FshdgtlLATGdmsG~v~v~--~~stg~~~~~~~~e~~dieWl~WHp-~a~il 163 (399)
T KOG0296|consen 89 FLWDISTGEFAGEL--TGHKDSVTCCSFSHDGTLLATGDMSGKVLVF--KVSTGGEQWKLDQEVEDIEWLKWHP-RAHIL 163 (399)
T ss_pred EEEEccCCcceeEe--cCCCCceEEEEEccCceEEEecCCCccEEEE--EcccCceEEEeecccCceEEEEecc-cccEE
Confidence 35666655422222 2234579999999999999999999998544 55554433321 1111233334444 34455
Q ss_pred cCCcccCCCCcccCCCCCe-eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeecc-
Q psy4579 100 ASNYDTDKGGNVQLPNEDA-QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGH- 177 (368)
Q Consensus 100 ~~~~~~~~~g~i~i~~~~~-~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h- 177 (368)
.++ +.||.+-+|.++. .....+.+|+.+++|=.|.|+| +.++++..||+|++|+..++. ++..+.+-
T Consensus 164 lAG---~~DGsvWmw~ip~~~~~kv~~Gh~~~ct~G~f~pdG-Kr~~tgy~dgti~~Wn~ktg~-------p~~~~~~~e 232 (399)
T KOG0296|consen 164 LAG---STDGSVWMWQIPSQALCKVMSGHNSPCTCGEFIPDG-KRILTGYDDGTIIVWNPKTGQ-------PLHKITQAE 232 (399)
T ss_pred Eee---cCCCcEEEEECCCcceeeEecCCCCCcccccccCCC-ceEEEEecCceEEEEecCCCc-------eeEEecccc
Confidence 555 5799999999987 5667788999999999999999 999999999999999999885 44555432
Q ss_pred ccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccc-cceeeeecccccEeEEEEee-----ecccccCCCC
Q psy4579 178 TAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVI-DAKTIFTGHTAVVEDYSIHR-----LILGTHTSDE 251 (368)
Q Consensus 178 ~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~v~~v~~~~-----~~~~~~~~d~ 251 (368)
..+.. ++.++.. +..+++|+.++.+++-+..+++-..-.. ........+...+.++.+.+ .+.++++-|+
T Consensus 233 ~~~~~---~~~~~~~-~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~~esve~~~~ss~lpL~A~G~vdG 308 (399)
T KOG0296|consen 233 GLELP---CISLNLA-GSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPELKPSQEELDESVESIPSSSKLPLAACGSVDG 308 (399)
T ss_pred cCcCC---ccccccc-cceeEeccCCccEEEEccccceEEEecCCCCccccccchhhhhhhhhcccccccchhhcccccc
Confidence 22333 8888887 8899999999999988776653110000 00111224555566666644 4678888888
Q ss_pred ccceEEEEee-----cCCccccccccccc--------CCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEE
Q psy4579 252 QNHLLIASVQ-----LPNEDAQFDASNYD--------TDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIAT 318 (368)
Q Consensus 252 ~~~~~~~~~~-----~~~~~~~~~~~~~d--------~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~las 318 (368)
++.+|..... +..+.. ..-..|. ..+|.++.||.++|++...+. +|..+|.+++.+|+. ++++|
T Consensus 309 ~i~iyD~a~~~~R~~c~he~~-V~~l~w~~t~~l~t~c~~g~v~~wDaRtG~l~~~y~-GH~~~Il~f~ls~~~-~~vvT 385 (399)
T KOG0296|consen 309 TIAIYDLAASTLRHICEHEDG-VTKLKWLNTDYLLTACANGKVRQWDARTGQLKFTYT-GHQMGILDFALSPQK-RLVVT 385 (399)
T ss_pred eEEEEecccchhheeccCCCc-eEEEEEcCcchheeeccCceEEeeeccccceEEEEe-cCchheeEEEEcCCC-cEEEE
Confidence 8888854322 111111 1111121 245778999999999999988 999999999999999 68889
Q ss_pred ecCCCeEEEEECC
Q psy4579 319 KTPSSDVLVFDYT 331 (368)
Q Consensus 319 gs~Dg~i~iwd~~ 331 (368)
+|.|++.+||+..
T Consensus 386 ~s~D~~a~VF~v~ 398 (399)
T KOG0296|consen 386 VSDDNTALVFEVP 398 (399)
T ss_pred ecCCCeEEEEecC
Confidence 9999999999874
|
|
| >KOG0274|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.1e-21 Score=180.48 Aligned_cols=267 Identities=16% Similarity=0.185 Sum_probs=195.9
Q ss_pred hhhhcCcchheeecccccccCceeeEecCCcccccCCCCccccccCcceeeeccccCC--CCCcEEEEEEecCCCccccc
Q psy4579 22 IWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSD--EQNHLLIASVQLPNEDAQFD 99 (368)
Q Consensus 22 ~w~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~~~ 99 (368)
+|++.--..|..+.. ....-++|.+|. ..++++++.++++ ..|+...+..... ..+...+..+.++..+..+.
T Consensus 191 ~~~~~~~~~~~~~~~-~~~~~~~~~q~~--~~~~~~~s~~~tl--~~~~~~~~~~i~~~l~GH~g~V~~l~~~~~~~~lv 265 (537)
T KOG0274|consen 191 NWRKLFRRGYKVLLG-TDDHVVLCLQLH--DGFFKSGSDDSTL--HLWDLNNGYLILTRLVGHFGGVWGLAFPSGGDKLV 265 (537)
T ss_pred cccccccccceeecc-cCcchhhhheee--cCeEEecCCCcee--EEeecccceEEEeeccCCCCCceeEEEecCCCEEE
Confidence 354443333443333 223346788888 6677889999988 5566666655444 33445688888987433322
Q ss_pred cCCcccCCCCcccCCCCC-eeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccc
Q psy4579 100 ASNYDTDKGGNVQLPNED-AQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHT 178 (368)
Q Consensus 100 ~~~~~~~~~g~i~i~~~~-~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~ 178 (368)
++ +.|.++++||.. ++....+.+|...|.|+...+ ..+++|+.|.+|++|+++++. .+..+.+|.
T Consensus 266 -sg---S~D~t~rvWd~~sg~C~~~l~gh~stv~~~~~~~---~~~~sgs~D~tVkVW~v~n~~-------~l~l~~~h~ 331 (537)
T KOG0274|consen 266 -SG---STDKTERVWDCSTGECTHSLQGHTSSVRCLTIDP---FLLVSGSRDNTVKVWDVTNGA-------CLNLLRGHT 331 (537)
T ss_pred -EE---ecCCcEEeEecCCCcEEEEecCCCceEEEEEccC---ceEeeccCCceEEEEeccCcc-------eEEEecccc
Confidence 22 459999999976 577788889999999999885 678899999999999999875 567888899
Q ss_pred cceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee-ecccccCCCCccceEE
Q psy4579 179 AVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR-LILGTHTSDEQNHLLI 257 (368)
Q Consensus 179 ~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~-~~~~~~~~d~~~~~~~ 257 (368)
++|+ ++..+ +.++++|+.|++|++||+++. ++++++.+|...|.++.+.. ..+.+++-|+.+++
T Consensus 332 ~~V~---~v~~~---~~~lvsgs~d~~v~VW~~~~~-------~cl~sl~gH~~~V~sl~~~~~~~~~Sgs~D~~Ikv-- 396 (537)
T KOG0274|consen 332 GPVN---CVQLD---EPLLVSGSYDGTVKVWDPRTG-------KCLKSLSGHTGRVYSLIVDSENRLLSGSLDTTIKV-- 396 (537)
T ss_pred ccEE---EEEec---CCEEEEEecCceEEEEEhhhc-------eeeeeecCCcceEEEEEecCcceEEeeeeccceEe--
Confidence 9996 88886 789999999999999999976 68999999999999998876 55555554443443
Q ss_pred EEeecCCcccccccccccCCCCCcccccCCCC-ceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCC
Q psy4579 258 ASVQLPNEDAQFDASNYDTDKGDFGGFGSVSG-KIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSK 336 (368)
Q Consensus 258 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~ 336 (368)
||+.+. ++...+. +|..-+..+.+. + .+|++++.|++|++||...
T Consensus 397 --------------------------Wdl~~~~~c~~tl~-~h~~~v~~l~~~--~-~~Lvs~~aD~~Ik~WD~~~---- 442 (537)
T KOG0274|consen 397 --------------------------WDLRTKRKCIHTLQ-GHTSLVSSLLLR--D-NFLVSSSADGTIKLWDAEE---- 442 (537)
T ss_pred --------------------------ecCCchhhhhhhhc-CCcccccccccc--c-ceeEeccccccEEEeeccc----
Confidence 444445 4444454 788888666654 3 4677999999999999975
Q ss_pred CCCCCCCCCceeeec-ccCceeeecce
Q psy4579 337 PDPNGECHPDLRLRG-HQKEGLIEGTY 362 (368)
Q Consensus 337 ~~~~~~~~~~~~~~g-h~~~V~~l~w~ 362 (368)
...+..+.+ |...|.++++.
T Consensus 443 ------~~~~~~~~~~~~~~v~~l~~~ 463 (537)
T KOG0274|consen 443 ------GECLRTLEGRHVGGVSALALG 463 (537)
T ss_pred ------CceeeeeccCCcccEEEeecC
Confidence 333446666 77888888875
|
|
| >KOG1407|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=2e-21 Score=154.60 Aligned_cols=261 Identities=11% Similarity=0.076 Sum_probs=185.5
Q ss_pred cccCceeeEecCCcccccCCCCccccccCcceeeeccccCC--C-CCcEEEEEEec-CCCccccccCCcccCCCCcccCC
Q psy4579 39 LEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSD--E-QNHLLIASVQL-PNEDAQFDASNYDTDKGGNVQLP 114 (368)
Q Consensus 39 ~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~i~~~~~-~~~~~~~~~~~~~~~~~g~i~i~ 114 (368)
..-++.+++|.-+|++|++|+.|+++.+|+.+.. ....+ . .....+..+.+ |.+...+.++ ++|.+|++|
T Consensus 19 ~~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~--r~~~~~~~~gh~~svdql~w~~~~~d~~ata----s~dk~ir~w 92 (313)
T KOG1407|consen 19 HVQKVHSVAWNCDGTKLASGSFDKTVSVWNLERD--RFRKELVYRGHTDSVDQLCWDPKHPDLFATA----SGDKTIRIW 92 (313)
T ss_pred hhhcceEEEEcccCceeeecccCCceEEEEecch--hhhhhhcccCCCcchhhheeCCCCCcceEEe----cCCceEEEE
Confidence 3457899999999999999999999966655443 23222 2 22234555555 4444433332 358899999
Q ss_pred CCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCC
Q psy4579 115 NEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLN 194 (368)
Q Consensus 115 ~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~ 194 (368)
+............++.-.-+.|+|+| .+++.++.|..|.+.|.++.+. ....+ ....+. -++|+-+ +
T Consensus 93 d~r~~k~~~~i~~~~eni~i~wsp~g-~~~~~~~kdD~it~id~r~~~~-------~~~~~-~~~e~n---e~~w~~~-n 159 (313)
T KOG1407|consen 93 DIRSGKCTARIETKGENINITWSPDG-EYIAVGNKDDRITFIDARTYKI-------VNEEQ-FKFEVN---EISWNNS-N 159 (313)
T ss_pred EeccCcEEEEeeccCcceEEEEcCCC-CEEEEecCcccEEEEEecccce-------eehhc-ccceee---eeeecCC-C
Confidence 98754444444445555558999999 9999999999999999988642 22222 222332 7888865 7
Q ss_pred CeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee--ecccccCCCCccceEEEEeecCCcccccccc
Q psy4579 195 GYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LILGTHTSDEQNHLLIASVQLPNEDAQFDAS 272 (368)
Q Consensus 195 ~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 272 (368)
++|+--..-|.|.|...-.. +++..+++|...+.|+.|.| ..+++|+.|..+.+|...
T Consensus 160 d~Fflt~GlG~v~ILsypsL-------kpv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~------------- 219 (313)
T KOG1407|consen 160 DLFFLTNGLGCVEILSYPSL-------KPVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVD------------- 219 (313)
T ss_pred CEEEEecCCceEEEEecccc-------ccccccccCCcceEEEEECCCCceEeeccccceeeccChh-------------
Confidence 77666677899999877643 67889999999999999987 577888877666665332
Q ss_pred cccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeecc
Q psy4579 273 NYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGH 352 (368)
Q Consensus 273 ~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh 352 (368)
.--++..+. -+.-+|..+.|+.+| .+||+||+|..|-|=++.. +..+.. ..|
T Consensus 220 ---------------ELiC~R~is-RldwpVRTlSFS~dg-~~lASaSEDh~IDIA~vet----------Gd~~~e-I~~ 271 (313)
T KOG1407|consen 220 ---------------ELICERCIS-RLDWPVRTLSFSHDG-RMLASASEDHFIDIAEVET----------GDRVWE-IPC 271 (313)
T ss_pred ---------------Hhhhheeec-cccCceEEEEeccCc-ceeeccCccceEEeEeccc----------CCeEEE-eec
Confidence 111122222 578899999999999 7999999999999988865 333333 368
Q ss_pred cCceeeecceeeee
Q psy4579 353 QKEGLIEGTYNCYL 366 (368)
Q Consensus 353 ~~~V~~l~w~p~~~ 366 (368)
.++-+.++|||.++
T Consensus 272 ~~~t~tVAWHPk~~ 285 (313)
T KOG1407|consen 272 EGPTFTVAWHPKRP 285 (313)
T ss_pred cCCceeEEecCCCc
Confidence 89999999999874
|
|
| >KOG1332|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.7e-22 Score=158.13 Aligned_cols=194 Identities=18% Similarity=0.227 Sum_probs=153.1
Q ss_pred ccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEE-eCCCCCeEEEeeCC
Q psy4579 125 YDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSW-NPSLNGYLLSASDD 203 (368)
Q Consensus 125 ~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~-~p~~~~~l~s~s~d 203 (368)
..|++.|..+...--| ..||||+.|++|+|+.+++.... .++.++.||++|| +.++| +|..+.+|||++.|
T Consensus 8 t~H~D~IHda~lDyyg-krlATcsSD~tVkIf~v~~n~~s----~ll~~L~Gh~GPV---wqv~wahPk~G~iLAScsYD 79 (299)
T KOG1332|consen 8 TQHEDMIHDAQLDYYG-KRLATCSSDGTVKIFEVRNNGQS----KLLAELTGHSGPV---WKVAWAHPKFGTILASCSYD 79 (299)
T ss_pred hhhhhhhhHhhhhhhc-ceeeeecCCccEEEEEEcCCCCc----eeeeEecCCCCCe---eEEeecccccCcEeeEeecC
Confidence 4588899888888778 99999999999999999876531 2678999999999 59999 67779999999999
Q ss_pred CcEEEEECCCCCCCCccccceeeeecccccEeEEEEee----ecccccCCCCccceEEEEeecCCcccccccccccCCCC
Q psy4579 204 HTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR----LILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKG 279 (368)
Q Consensus 204 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~----~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 279 (368)
|.|.||.-.++. +........|...|++++|.| +++++++.|+.+.++.... . |
T Consensus 80 gkVIiWke~~g~-----w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~----------------~-g 137 (299)
T KOG1332|consen 80 GKVIIWKEENGR-----WTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDS----------------S-G 137 (299)
T ss_pred ceEEEEecCCCc-----hhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcC----------------C-C
Confidence 999999877762 344566778999999999986 5778888888877764431 1 0
Q ss_pred CcccccCCCCceeeeeecCcccceeEEEEeCC---C----------CcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCc
Q psy4579 280 DFGGFGSVSGKIEIEIKINHEGEVNRARYMPQ---N----------PCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPD 346 (368)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~---~----------~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~ 346 (368)
+-....+..+|.-.|++++|.|- | .+-|+||+.|..|+||+... +.....
T Consensus 138 ---------~w~t~ki~~aH~~GvnsVswapa~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~--------~~w~~e 200 (299)
T KOG1332|consen 138 ---------GWTTSKIVFAHEIGVNSVSWAPASAPGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDS--------DSWKLE 200 (299)
T ss_pred ---------CccchhhhhccccccceeeecCcCCCccccccCcccccceeeccCCccceeeeecCC--------cchhhh
Confidence 01111223489999999999996 3 13488999999999999975 223444
Q ss_pred eeeecccCceeeecceeee
Q psy4579 347 LRLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 347 ~~~~gh~~~V~~l~w~p~~ 365 (368)
..|.+|++-|..++|.|..
T Consensus 201 ~~l~~H~dwVRDVAwaP~~ 219 (299)
T KOG1332|consen 201 RTLEGHKDWVRDVAWAPSV 219 (299)
T ss_pred hhhhhcchhhhhhhhcccc
Confidence 5689999999999999975
|
|
| >PTZ00420 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.1e-20 Score=172.71 Aligned_cols=185 Identities=18% Similarity=0.260 Sum_probs=130.9
Q ss_pred CCCcccCCCCCe-eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCC-Ccccccceeeeccccceecc
Q psy4579 107 KGGNVQLPNEDA-QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKE-NRVIDAKTIFTGHTAVVEVR 184 (368)
Q Consensus 107 ~~g~i~i~~~~~-~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~-~~~~~~~~~~~~h~~~v~~~ 184 (368)
.+|.+++|+... .....+.+|.+.|.+++|+|+.+.+||+|+.||+|+|||+.+.... .....+...+.+|...|.
T Consensus 52 ~~gvI~L~~~~r~~~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~-- 129 (568)
T PTZ00420 52 LIGAIRLENQMRKPPVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKIS-- 129 (568)
T ss_pred ceeEEEeeecCCCceEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEE--
Confidence 467788998654 3455678899999999999974489999999999999999864321 111124567889999996
Q ss_pred eeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee--ecccccCCCCccceEEEEeec
Q psy4579 185 YGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LILGTHTSDEQNHLLIASVQL 262 (368)
Q Consensus 185 ~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~d~~~~~~~~~~~~ 262 (368)
+++|+|+...+|++++.|++|+|||++++. ....+. |...|.+++|++ .++++++.|+
T Consensus 130 -sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~-------~~~~i~-~~~~V~SlswspdG~lLat~s~D~----------- 189 (568)
T PTZ00420 130 -IIDWNPMNYYIMCSSGFDSFVNIWDIENEK-------RAFQIN-MPKKLSSLKWNIKGNLLSGTCVGK----------- 189 (568)
T ss_pred -EEEECCCCCeEEEEEeCCCeEEEEECCCCc-------EEEEEe-cCCcEEEEEECCCCCEEEEEecCC-----------
Confidence 999999844567899999999999999873 233443 557799999985 2333333333
Q ss_pred CCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEE-----EEeCCCCcEEEEecCCC----eEEEEECCC
Q psy4579 263 PNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRA-----RYMPQNPCVIATKTPSS----DVLVFDYTK 332 (368)
Q Consensus 263 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~-----~~~p~~~~~lasgs~Dg----~i~iwd~~~ 332 (368)
.+.+||+++++....+. +|.+.+.+. .|++++. +|+|++.|+ .|+|||++.
T Consensus 190 -----------------~IrIwD~Rsg~~i~tl~-gH~g~~~s~~v~~~~fs~d~~-~IlTtG~d~~~~R~VkLWDlr~ 249 (568)
T PTZ00420 190 -----------------HMHIIDPRKQEIASSFH-IHDGGKNTKNIWIDGLGGDDN-YILSTGFSKNNMREMKLWDLKN 249 (568)
T ss_pred -----------------EEEEEECCCCcEEEEEe-cccCCceeEEEEeeeEcCCCC-EEEEEEcCCCCccEEEEEECCC
Confidence 34445555666665555 788765433 3457874 555655553 799999985
|
|
| >KOG0275|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=3e-22 Score=163.98 Aligned_cols=167 Identities=23% Similarity=0.279 Sum_probs=130.2
Q ss_pred ccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcc-cccceeeeccccceecceeeEEeCCCCCeEEEeeCC
Q psy4579 125 YDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRV-IDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDD 203 (368)
Q Consensus 125 ~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~-~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~d 203 (368)
++.+..+.|..|+|+| ++|++|+.||.|.+|+..+++..... ......+.-+..+| .|++|+.+ ..++|+|+.|
T Consensus 210 Fg~KSh~EcA~FSPDg-qyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aV---lci~FSRD-sEMlAsGsqD 284 (508)
T KOG0275|consen 210 FGQKSHVECARFSPDG-QYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAV---LCISFSRD-SEMLASGSQD 284 (508)
T ss_pred cccccchhheeeCCCC-ceEeeccccceeeeehhccchhhhhhhhhhhcceeecccce---EEEeeccc-HHHhhccCcC
Confidence 4567789999999999 99999999999999999887532110 01122344567788 49999998 9999999999
Q ss_pred CcEEEEECCCCCCCCccccceeeee-cccccEeEEEEee--ecccccCCCCccceEEEEeecCCcccccccccccCCCCC
Q psy4579 204 HTICLWDINATPKENRVIDAKTIFT-GHTAVVEDYSIHR--LILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGD 280 (368)
Q Consensus 204 g~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~v~~v~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 280 (368)
|.|++|.++++ .+++.|. +|+..|+++.|++ .-+.+++.|..
T Consensus 285 GkIKvWri~tG-------~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~t---------------------------- 329 (508)
T KOG0275|consen 285 GKIKVWRIETG-------QCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQT---------------------------- 329 (508)
T ss_pred CcEEEEEEecc-------hHHHHhhhhhccCeeEEEEccCcchhhcccccce----------------------------
Confidence 99999999999 5677776 7999999999975 12222222222
Q ss_pred cccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCC
Q psy4579 281 FGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKH 333 (368)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~ 333 (368)
+.+-++.+|++..+++ +|+.-|+.+.|.++|. .++++|.||+|++|+.+..
T Consensus 330 vRiHGlKSGK~LKEfr-GHsSyvn~a~ft~dG~-~iisaSsDgtvkvW~~Ktt 380 (508)
T KOG0275|consen 330 VRIHGLKSGKCLKEFR-GHSSYVNEATFTDDGH-HIISASSDGTVKVWHGKTT 380 (508)
T ss_pred EEEeccccchhHHHhc-CccccccceEEcCCCC-eEEEecCCccEEEecCcch
Confidence 3334455788877887 9999999999999995 5559999999999998763
|
|
| >KOG0308|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.5e-21 Score=173.24 Aligned_cols=212 Identities=15% Similarity=0.164 Sum_probs=164.3
Q ss_pred ccCCCCcccCCCCCe--e-----eeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeec
Q psy4579 104 DTDKGGNVQLPNEDA--Q-----FDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTG 176 (368)
Q Consensus 104 ~~~~~g~i~i~~~~~--~-----~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~ 176 (368)
..+.||.|++|+... . ...++..|.+=|+.+....++ +.|+++|.|-+|++|+...... -+..+++.
T Consensus 42 TgGRDg~i~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~~~-~tlIS~SsDtTVK~W~~~~~~~-----~c~stir~ 115 (735)
T KOG0308|consen 42 TGGRDGIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCGNG-KTLISASSDTTVKVWNAHKDNT-----FCMSTIRT 115 (735)
T ss_pred ecCCCceEEEeccccccCCcccchhhhhhhhHhHHhhHHhhcCC-CceEEecCCceEEEeecccCcc-----hhHhhhhc
Confidence 335799999998753 1 345677799999999999998 8999999999999999987641 15678899
Q ss_pred cccceecceeeEE-eCCCCCeEEEeeCCCcEEEEECCCCCCC----Cccccceeeee-cccccEeEEEEeee--cccccC
Q psy4579 177 HTAVVEVRYGLSW-NPSLNGYLLSASDDHTICLWDINATPKE----NRVIDAKTIFT-GHTAVVEDYSIHRL--ILGTHT 248 (368)
Q Consensus 177 h~~~v~~~~~i~~-~p~~~~~l~s~s~dg~i~iwd~~~~~~~----~~~~~~~~~~~-~~~~~v~~v~~~~~--~~~~~~ 248 (368)
|+..|. |+++ .++ ..++||||.|+.|.+||++++... .+. .....+. |+..+|++++-++. ++.+|+
T Consensus 116 H~DYVk---cla~~ak~-~~lvaSgGLD~~IflWDin~~~~~l~~s~n~-~t~~sl~sG~k~siYSLA~N~t~t~ivsGg 190 (735)
T KOG0308|consen 116 HKDYVK---CLAYIAKN-NELVASGGLDRKIFLWDINTGTATLVASFNN-VTVNSLGSGPKDSIYSLAMNQTGTIIVSGG 190 (735)
T ss_pred ccchhe---eeeecccC-ceeEEecCCCccEEEEEccCcchhhhhhccc-cccccCCCCCccceeeeecCCcceEEEecC
Confidence 999997 9999 555 889999999999999999987330 000 1112233 78888888888763 333333
Q ss_pred CCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEE
Q psy4579 249 SDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVF 328 (368)
Q Consensus 249 ~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iw 328 (368)
. .+.+.+||+++.+.+..++ ||...|.++..+++|. .++|+|.||+|++|
T Consensus 191 t----------------------------ek~lr~wDprt~~kimkLr-GHTdNVr~ll~~dDGt-~~ls~sSDgtIrlW 240 (735)
T KOG0308|consen 191 T----------------------------EKDLRLWDPRTCKKIMKLR-GHTDNVRVLLVNDDGT-RLLSASSDGTIRLW 240 (735)
T ss_pred c----------------------------ccceEEeccccccceeeee-ccccceEEEEEcCCCC-eEeecCCCceEEee
Confidence 2 2335566677788888887 9999999999999995 55599999999999
Q ss_pred ECCCCCCCCCCCCCCCCceeeecccCceeeecceeeee
Q psy4579 329 DYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYNCYL 366 (368)
Q Consensus 329 d~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p~~~ 366 (368)
|+.. .+.+.++..|++.|+++.-+|..-
T Consensus 241 dLgq----------QrCl~T~~vH~e~VWaL~~~~sf~ 268 (735)
T KOG0308|consen 241 DLGQ----------QRCLATYIVHKEGVWALQSSPSFT 268 (735)
T ss_pred eccc----------cceeeeEEeccCceEEEeeCCCcc
Confidence 9975 455567889999999999887653
|
|
| >KOG4283|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.1e-20 Score=153.06 Aligned_cols=203 Identities=20% Similarity=0.232 Sum_probs=143.5
Q ss_pred ccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCc---cc---c--cceeeeccccceecceeeEEeCCCCCe
Q psy4579 125 YDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENR---VI---D--AKTIFTGHTAVVEVRYGLSWNPSLNGY 196 (368)
Q Consensus 125 ~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~---~~---~--~~~~~~~h~~~v~~~~~i~~~p~~~~~ 196 (368)
..|.+.|++|...+...+++++|+.||.|-+||+++...... +. + ...--.+|.-.|+ ++.|-|-+..+
T Consensus 40 r~HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~is---s~~WyP~DtGm 116 (397)
T KOG4283|consen 40 RPHGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAIS---SAIWYPIDTGM 116 (397)
T ss_pred ccCCCccceeeeccccceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeee---eeEEeeecCce
Confidence 458899999999986559999999999999999986541110 00 0 1122346788886 99999988999
Q ss_pred EEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee-----ecccccCCCCccceEEEEeecCCccccccc
Q psy4579 197 LLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR-----LILGTHTSDEQNHLLIASVQLPNEDAQFDA 271 (368)
Q Consensus 197 l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~-----~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 271 (368)
|.++|.|.++++||..+.+. ...|. ....|++-+++| .+++++..+.+
T Consensus 117 FtssSFDhtlKVWDtnTlQ~-------a~~F~-me~~VYshamSp~a~sHcLiA~gtr~~~------------------- 169 (397)
T KOG4283|consen 117 FTSSSFDHTLKVWDTNTLQE-------AVDFK-MEGKVYSHAMSPMAMSHCLIAAGTRDVQ------------------- 169 (397)
T ss_pred eecccccceEEEeeccccee-------eEEee-cCceeehhhcChhhhcceEEEEecCCCc-------------------
Confidence 99999999999999988642 22232 344555555554 23333333322
Q ss_pred ccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCC----CCCCCCCCCCce
Q psy4579 272 SNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPS----KPDPNGECHPDL 347 (368)
Q Consensus 272 ~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~----~~~~~~~~~~~~ 347 (368)
+.+.|+.+|.....+. +|.+.|.++.|+|..+.+|||||.||.|++||++...- ....+++..|..
T Consensus 170 ---------VrLCDi~SGs~sH~Ls-GHr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~ 239 (397)
T KOG4283|consen 170 ---------VRLCDIASGSFSHTLS-GHRDGVLAVEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPIL 239 (397)
T ss_pred ---------EEEEeccCCcceeeec-cccCceEEEEeccCceeEEEecCCCceEEEEEeecccceeEEeecccCccCccc
Confidence 3344555666666665 99999999999999999999999999999999997521 001122233322
Q ss_pred -eeecccCceeeecceeeeec
Q psy4579 348 -RLRGHQKEGLIEGTYNCYLQ 367 (368)
Q Consensus 348 -~~~gh~~~V~~l~w~p~~~~ 367 (368)
.-..|.+.|++++|....+|
T Consensus 240 ~~n~ah~gkvngla~tSd~~~ 260 (397)
T KOG4283|consen 240 KTNTAHYGKVNGLAWTSDARY 260 (397)
T ss_pred cccccccceeeeeeecccchh
Confidence 24579999999999987655
|
|
| >KOG0270|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=5.3e-21 Score=162.66 Aligned_cols=164 Identities=25% Similarity=0.315 Sum_probs=130.0
Q ss_pred cccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCC
Q psy4579 124 NYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDD 203 (368)
Q Consensus 124 ~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~d 203 (368)
..+|+++|.+|+|+..-.+.||+||.|.+|++||+.+++ +..++..|.+.|. +++|+|.....|++||.|
T Consensus 239 ~~gHTdavl~Ls~n~~~~nVLaSgsaD~TV~lWD~~~g~-------p~~s~~~~~k~Vq---~l~wh~~~p~~LLsGs~D 308 (463)
T KOG0270|consen 239 ASGHTDAVLALSWNRNFRNVLASGSADKTVKLWDVDTGK-------PKSSITHHGKKVQ---TLEWHPYEPSVLLSGSYD 308 (463)
T ss_pred cccchHHHHHHHhccccceeEEecCCCceEEEEEcCCCC-------cceehhhcCCcee---EEEecCCCceEEEecccc
Confidence 456999999999998877899999999999999999986 6688888999997 999999889999999999
Q ss_pred CcEEEEECCCCCCCCccccceeeeecccccEeEEEEee---ecccccCCCCccceEEEEeecCCcccccccccccCCCCC
Q psy4579 204 HTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR---LILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGD 280 (368)
Q Consensus 204 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~---~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 280 (368)
++|.+.|.|...... ..-.....|..++|++ +.+..+..| |.
T Consensus 309 ~~V~l~D~R~~~~s~-------~~wk~~g~VEkv~w~~~se~~f~~~tdd----------------------------G~ 353 (463)
T KOG0270|consen 309 GTVALKDCRDPSNSG-------KEWKFDGEVEKVAWDPHSENSFFVSTDD----------------------------GT 353 (463)
T ss_pred ceEEeeeccCccccC-------ceEEeccceEEEEecCCCceeEEEecCC----------------------------ce
Confidence 999999999743222 1112456788889975 222222222 33
Q ss_pred cccccCCCC-ceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCC
Q psy4579 281 FGGFGSVSG-KIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKH 333 (368)
Q Consensus 281 ~~~~~~~~~-~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~ 333 (368)
+..+|.+.. +...++. +|.++|.++++++..+++++|+|.|+.|++|++...
T Consensus 354 v~~~D~R~~~~~vwt~~-AHd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~~~ 406 (463)
T KOG0270|consen 354 VYYFDIRNPGKPVWTLK-AHDDEISGLSVNIQTPGLLSTASTDKVVKLWKFDVD 406 (463)
T ss_pred EEeeecCCCCCceeEEE-eccCCcceEEecCCCCcceeeccccceEEEEeecCC
Confidence 333444333 5556665 899999999999999999999999999999999753
|
|
| >KOG0274|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.3e-20 Score=173.42 Aligned_cols=199 Identities=20% Similarity=0.245 Sum_probs=162.0
Q ss_pred CCCCcccCCCCCe-eeeec-cccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceec
Q psy4579 106 DKGGNVQLPNEDA-QFDAS-NYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEV 183 (368)
Q Consensus 106 ~~~g~i~i~~~~~-~~~~~-~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~ 183 (368)
+.+++|++|+... ..+.. +.+|.+.|+++++...+ .+|++|+.|.++++||..++. +..++.+|.+.+.
T Consensus 225 s~~~tl~~~~~~~~~~i~~~l~GH~g~V~~l~~~~~~-~~lvsgS~D~t~rvWd~~sg~-------C~~~l~gh~stv~- 295 (537)
T KOG0274|consen 225 SDDSTLHLWDLNNGYLILTRLVGHFGGVWGLAFPSGG-DKLVSGSTDKTERVWDCSTGE-------CTHSLQGHTSSVR- 295 (537)
T ss_pred CCCceeEEeecccceEEEeeccCCCCCceeEEEecCC-CEEEEEecCCcEEeEecCCCc-------EEEEecCCCceEE-
Confidence 4588999999764 55666 89999999999999855 899999999999999999886 6799999999985
Q ss_pred ceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeeecccccCCCCccceEEEEeecC
Q psy4579 184 RYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLP 263 (368)
Q Consensus 184 ~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~ 263 (368)
++... ..++++||.|.+|++|++.++ ..+..+.+|..+|+++..+..++.+++.|+.+.+|.
T Consensus 296 --~~~~~---~~~~~sgs~D~tVkVW~v~n~-------~~l~l~~~h~~~V~~v~~~~~~lvsgs~d~~v~VW~------ 357 (537)
T KOG0274|consen 296 --CLTID---PFLLVSGSRDNTVKVWDVTNG-------ACLNLLRGHTGPVNCVQLDEPLLVSGSYDGTVKVWD------ 357 (537)
T ss_pred --EEEcc---CceEeeccCCceEEEEeccCc-------ceEEEeccccccEEEEEecCCEEEEEecCceEEEEE------
Confidence 76654 567889999999999999987 567888889999999999877777777666555543
Q ss_pred CcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCC
Q psy4579 264 NEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGEC 343 (368)
Q Consensus 264 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~ 343 (368)
..++++...+. +|...|.++.+.+. ..+.+|+.|++|++||++...
T Consensus 358 ----------------------~~~~~cl~sl~-gH~~~V~sl~~~~~--~~~~Sgs~D~~IkvWdl~~~~--------- 403 (537)
T KOG0274|consen 358 ----------------------PRTGKCLKSLS-GHTGRVYSLIVDSE--NRLLSGSLDTTIKVWDLRTKR--------- 403 (537)
T ss_pred ----------------------hhhceeeeeec-CCcceEEEEEecCc--ceEEeeeeccceEeecCCchh---------
Confidence 33466666666 89999999988876 355699999999999998620
Q ss_pred CCceeeecccCceeeecceeee
Q psy4579 344 HPDLRLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 344 ~~~~~~~gh~~~V~~l~w~p~~ 365 (368)
..+..+.+|.+.|.++....+.
T Consensus 404 ~c~~tl~~h~~~v~~l~~~~~~ 425 (537)
T KOG0274|consen 404 KCIHTLQGHTSLVSSLLLRDNF 425 (537)
T ss_pred hhhhhhcCCcccccccccccce
Confidence 4566889999999887776554
|
|
| >KOG0307|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=2e-21 Score=182.68 Aligned_cols=270 Identities=16% Similarity=0.191 Sum_probs=176.0
Q ss_pred eeEecCCcc-cccCCCCc----------cccccCcceeeeccc----cCCCCCcEEEEEEecCCCccc---cccCCcccC
Q psy4579 45 TAQWLPDVT-SVQLPNED----------AQFDASNYDTDKGTH----TSDEQNHLLIASVQLPNEDAQ---FDASNYDTD 106 (368)
Q Consensus 45 ~~~~~p~~~-~l~~~~~~----------~~~~~~~~~~~~~~~----~~~~~~~~~i~~~~~~~~~~~---~~~~~~~~~ 106 (368)
.++|+|++. +++.|... ..++++.++...+.. ....+.......+.|.+.... +.+.+ .
T Consensus 11 ~~awSp~~~~~laagt~aq~~D~sfst~~slEifeld~~~~~~dlk~~~s~~s~~rF~kL~W~~~g~~~~GlIaGG---~ 87 (1049)
T KOG0307|consen 11 TFAWSPASPPLLAAGTAAQQFDASFSTSASLEIFELDFSDESSDLKPVGSLQSSNRFNKLAWGSYGSHSHGLIAGG---L 87 (1049)
T ss_pred eEEecCCCchhhHHHhhhhccccccccccccceeeecccCccccccccccccccccceeeeecccCCCccceeecc---c
Confidence 488999986 45544333 333344443333321 111222333455666443333 23333 4
Q ss_pred CCCcccCCCCCe-------eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceee--ecc
Q psy4579 107 KGGNVQLPNEDA-------QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIF--TGH 177 (368)
Q Consensus 107 ~~g~i~i~~~~~-------~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~--~~h 177 (368)
.||.|.+|+... ..+.+...|++.|..|+|++..+++||+|+.||.|.|||+++.... ..+ ...
T Consensus 88 edG~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~geI~iWDlnn~~tP-------~~~~~~~~ 160 (1049)
T KOG0307|consen 88 EDGNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADDGEILIWDLNKPETP-------FTPGSQAP 160 (1049)
T ss_pred cCCceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCceeeccCCCCcEEEeccCCcCCC-------CCCCCCCC
Confidence 699999999754 2345567799999999999998789999999999999999985431 112 123
Q ss_pred ccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeeccc--ccEeEEEEeeecccccCCCCccce
Q psy4579 178 TAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHT--AVVEDYSIHRLILGTHTSDEQNHL 255 (368)
Q Consensus 178 ~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~--~~v~~v~~~~~~~~~~~~d~~~~~ 255 (368)
.+.|. +++|+....+.|++++.+|.+.|||+|..+. +..+..+. ..+..++|||.. ...+
T Consensus 161 ~~eI~---~lsWNrkvqhILAS~s~sg~~~iWDlr~~~p-------ii~ls~~~~~~~~S~l~WhP~~--------aTql 222 (1049)
T KOG0307|consen 161 PSEIK---CLSWNRKVSHILASGSPSGRAVIWDLRKKKP-------IIKLSDTPGRMHCSVLAWHPDH--------ATQL 222 (1049)
T ss_pred cccce---EeccchhhhHHhhccCCCCCceeccccCCCc-------ccccccCCCccceeeeeeCCCC--------ceee
Confidence 45564 9999998788999999999999999998732 33333332 457889999721 1122
Q ss_pred EEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCC
Q psy4579 256 LIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPS 335 (368)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~ 335 (368)
++++ -|.+.-.+.+||++..........+|...|.++.|++.++.+|+|++.|+.|.+|+.++
T Consensus 223 ~~As--------------~dd~~PviqlWDlR~assP~k~~~~H~~GilslsWc~~D~~lllSsgkD~~ii~wN~~t--- 285 (1049)
T KOG0307|consen 223 LVAS--------------GDDSAPVIQLWDLRFASSPLKILEGHQRGILSLSWCPQDPRLLLSSGKDNRIICWNPNT--- 285 (1049)
T ss_pred eeec--------------CCCCCceeEeecccccCCchhhhcccccceeeeccCCCCchhhhcccCCCCeeEecCCC---
Confidence 2221 11122234445544444444444589999999999999988999999999999999976
Q ss_pred CCCCCCCCCCceeeecccCceeeecceeeee
Q psy4579 336 KPDPNGECHPDLRLRGHQKEGLIEGTYNCYL 366 (368)
Q Consensus 336 ~~~~~~~~~~~~~~~gh~~~V~~l~w~p~~~ 366 (368)
.+.+-.+-...+.+..+.|.|...
T Consensus 286 -------gEvl~~~p~~~nW~fdv~w~pr~P 309 (1049)
T KOG0307|consen 286 -------GEVLGELPAQGNWCFDVQWCPRNP 309 (1049)
T ss_pred -------ceEeeecCCCCcceeeeeecCCCc
Confidence 233334444556777888887654
|
|
| >KOG0302|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.5e-20 Score=155.54 Aligned_cols=191 Identities=23% Similarity=0.334 Sum_probs=144.6
Q ss_pred CcccCCCCCee----eeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecc
Q psy4579 109 GNVQLPNEDAQ----FDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVR 184 (368)
Q Consensus 109 g~i~i~~~~~~----~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~ 184 (368)
+.|++|..... -...+.+|++.|-.|.|||....+||+||.||+|+|||++.+.+. +....+.|.+.|+
T Consensus 234 ~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~-----~~~~~kAh~sDVN-- 306 (440)
T KOG0302|consen 234 KGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKK-----AAVSTKAHNSDVN-- 306 (440)
T ss_pred cceEeeeeccCceeecCccccccccchhhhccCCccCceEEeeecCceEEEEEecCCCcc-----ceeEeeccCCcee--
Confidence 45677765431 123466799999999999988789999999999999999987543 3345589999997
Q ss_pred eeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee---ecccccCCCCccceEEEEee
Q psy4579 185 YGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR---LILGTHTSDEQNHLLIASVQ 261 (368)
Q Consensus 185 ~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~---~~~~~~~~d~~~~~~~~~~~ 261 (368)
.|+|+.. ..+||+|+.||+++|||+|+-+.. .|+..|+-|..+|+++.|+| ..++.++.|.++.+|.+++.
T Consensus 307 -VISWnr~-~~lLasG~DdGt~~iwDLR~~~~~----~pVA~fk~Hk~pItsieW~p~e~s~iaasg~D~QitiWDlsvE 380 (440)
T KOG0302|consen 307 -VISWNRR-EPLLASGGDDGTLSIWDLRQFKSG----QPVATFKYHKAPITSIEWHPHEDSVIAASGEDNQITIWDLSVE 380 (440)
T ss_pred -eEEccCC-cceeeecCCCceEEEEEhhhccCC----CcceeEEeccCCeeEEEeccccCceEEeccCCCcEEEEEeecc
Confidence 9999988 669999999999999999987544 56789999999999999996 57888888999999988876
Q ss_pred cCCcccccccccccCCCCCcccccCCCCceeeeeecCcc--cceeEEEEeCCCCcEEEEecCCCeE
Q psy4579 262 LPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHE--GEVNRARYMPQNPCVIATKTPSSDV 325 (368)
Q Consensus 262 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~--~~i~~~~~~p~~~~~lasgs~Dg~i 325 (368)
.+.+...-..... + ..+..++..-|. ..|..+.|++.-+.++++.+.||.-
T Consensus 381 ~D~ee~~~~a~~~--------L-----~dlPpQLLFVHqGQke~KevhWH~QiPG~lvsTa~dGfn 433 (440)
T KOG0302|consen 381 ADEEEIDQEAAEG--------L-----QDLPPQLLFVHQGQKEVKEVHWHRQIPGLLVSTAIDGFN 433 (440)
T ss_pred CChhhhccccccc--------h-----hcCCceeEEEecchhHhhhheeccCCCCeEEEeccccee
Confidence 5432211111000 0 112222333453 4789999999988899898898843
|
|
| >KOG4378|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.1e-20 Score=162.84 Aligned_cols=284 Identities=15% Similarity=0.123 Sum_probs=192.4
Q ss_pred hhhhhhhhhhcCcchheeecccccccCceeeEecCCcc-cccCCCCccccccCcceeeeccccCC----CCCcEEEEEEe
Q psy4579 16 INEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVT-SVQLPNEDAQFDASNYDTDKGTHTSD----EQNHLLIASVQ 90 (368)
Q Consensus 16 ~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~i~~~~ 90 (368)
-.++.|+|....-..-+.+..+.-+.-+.++.|..... .++.-++|+.+.+|.-+-.+++-... .++..-+++..
T Consensus 10 ~gd~~kl~D~s~~~~~~~~~~~t~~pg~~s~~w~~~n~lvvas~~gdk~~~~~~K~g~~~~Vp~~~k~~gd~~~Cv~~~s 89 (673)
T KOG4378|consen 10 TGDKTKLSDFSDLETKSEYVHQTAEPGDFSFNWQRRNFLVVASMAGDKVMRIKEKDGKTPEVPRVRKLTGDNAFCVACAS 89 (673)
T ss_pred cCCceEEeecccccCccccccCCCCCcceeeeccccceEEEeecCCceeEEEecccCCCCccceeeccccchHHHHhhhh
Confidence 34677888887777777777776666699999988764 23334555555444322222211110 11111111111
Q ss_pred cCCCccccccCCcccCCCCcccCCCCCeeee-eccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccc
Q psy4579 91 LPNEDAQFDASNYDTDKGGNVQLPNEDAQFD-ASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVID 169 (368)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~-~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~ 169 (368)
.+ .+..++ ...|.|+|||+..+.+ ..+.+|+..|+++.++-.. .+||+++..|.|.|..+.++..
T Consensus 90 ~S----~y~~sg---G~~~~Vkiwdl~~kl~hr~lkdh~stvt~v~YN~~D-eyiAsvs~gGdiiih~~~t~~~------ 155 (673)
T KOG4378|consen 90 QS----LYEISG---GQSGCVKIWDLRAKLIHRFLKDHQSTVTYVDYNNTD-EYIASVSDGGDIIIHGTKTKQK------ 155 (673)
T ss_pred cc----eeeecc---CcCceeeehhhHHHHHhhhccCCcceeEEEEecCCc-ceeEEeccCCcEEEEecccCcc------
Confidence 11 111122 3578999999986554 4578899999999999887 8999999999999999988753
Q ss_pred cceeeecc-ccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCcccccee-eeecccccEeEEEEee---ecc
Q psy4579 170 AKTIFTGH-TAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKT-IFTGHTAVVEDYSIHR---LIL 244 (368)
Q Consensus 170 ~~~~~~~h-~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~v~~v~~~~---~~~ 244 (368)
...|.-. ...|+ -+.|+|....+|.+++.+|.|.+||+.... ++. -.+.|..+...|+|+| .++
T Consensus 156 -tt~f~~~sgqsvR---ll~ys~skr~lL~~asd~G~VtlwDv~g~s-------p~~~~~~~HsAP~~gicfspsne~l~ 224 (673)
T KOG4378|consen 156 -TTTFTIDSGQSVR---LLRYSPSKRFLLSIASDKGAVTLWDVQGMS-------PIFHASEAHSAPCRGICFSPSNEALL 224 (673)
T ss_pred -ccceecCCCCeEE---EeecccccceeeEeeccCCeEEEEeccCCC-------cccchhhhccCCcCcceecCCccceE
Confidence 2334333 23344 789999866788999999999999997763 333 3456999999999986 344
Q ss_pred cccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCe
Q psy4579 245 GTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSD 324 (368)
Q Consensus 245 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~ 324 (368)
.+.+-|..+ .++|..+.+..-.+ .-..+...++|.++| .+|+.|+..|.
T Consensus 225 vsVG~Dkki----------------------------~~yD~~s~~s~~~l--~y~~Plstvaf~~~G-~~L~aG~s~G~ 273 (673)
T KOG4378|consen 225 VSVGYDKKI----------------------------NIYDIRSQASTDRL--TYSHPLSTVAFSECG-TYLCAGNSKGE 273 (673)
T ss_pred EEecccceE----------------------------EEeeccccccccee--eecCCcceeeecCCc-eEEEeecCCce
Confidence 443333332 23333322222222 346688999999999 78999999999
Q ss_pred EEEEECCCCCCCCCCCCCCCCceeeecccCceeeecceee
Q psy4579 325 VLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYNC 364 (368)
Q Consensus 325 i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p~ 364 (368)
|..||+|. ...|+..+..|...|++++|-|.
T Consensus 274 ~i~YD~R~---------~k~Pv~v~sah~~sVt~vafq~s 304 (673)
T KOG4378|consen 274 LIAYDMRS---------TKAPVAVRSAHDASVTRVAFQPS 304 (673)
T ss_pred EEEEeccc---------CCCCceEeeecccceeEEEeeec
Confidence 99999995 35788899999999999999875
|
|
| >KOG0289|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.7e-19 Score=153.15 Aligned_cols=260 Identities=19% Similarity=0.187 Sum_probs=183.7
Q ss_pred ceeeEecCCcccccCCCCccccccCcceeeeccccCC-CCCcEEEEEEecCCC-ccccccCCcccCCCCcccCCCCCe-e
Q psy4579 43 SLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSD-EQNHLLIASVQLPNE-DAQFDASNYDTDKGGNVQLPNEDA-Q 119 (368)
Q Consensus 43 ~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~g~i~i~~~~~-~ 119 (368)
+.++.-.|....+.+|+.|..+.+++. ..+..... ..+...|..+.+.+. +..+.+ +.|..|++|.... .
T Consensus 222 i~ald~~~s~~~ilTGG~d~~av~~d~--~s~q~l~~~~Gh~kki~~v~~~~~~~~v~~a-----Sad~~i~vws~~~~s 294 (506)
T KOG0289|consen 222 ITALDIIPSSSKILTGGEDKTAVLFDK--PSNQILATLKGHTKKITSVKFHKDLDTVITA-----SADEIIRVWSVPLSS 294 (506)
T ss_pred eeEEeecCCCCcceecCCCCceEEEec--chhhhhhhccCcceEEEEEEeccchhheeec-----CCcceEEeecccccc
Confidence 556677777788999999988755544 33333333 333456777777443 333333 3588999999765 4
Q ss_pred eeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEE
Q psy4579 120 FDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLS 199 (368)
Q Consensus 120 ~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s 199 (368)
.......|+.+|+.+..+|.| .+|++++.||+..+.|++++.. +......+..|. ..+++|||| +.+|.+
T Consensus 295 ~~~~~~~h~~~V~~ls~h~tg-eYllsAs~d~~w~Fsd~~~g~~-------lt~vs~~~s~v~-~ts~~fHpD-gLifgt 364 (506)
T KOG0289|consen 295 EPTSSRPHEEPVTGLSLHPTG-EYLLSASNDGTWAFSDISSGSQ-------LTVVSDETSDVE-YTSAAFHPD-GLIFGT 364 (506)
T ss_pred CccccccccccceeeeeccCC-cEEEEecCCceEEEEEccCCcE-------EEEEeeccccce-eEEeeEcCC-ceEEec
Confidence 455567899999999999999 9999999999999999998852 222222122221 129999999 999999
Q ss_pred eeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee--ecccccCCCCccceEEEEeecCCcccccccccccCC
Q psy4579 200 ASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTD 277 (368)
Q Consensus 200 ~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~ 277 (368)
|..||.|+|||+..+. ....|.+|+.+|..++|+. ..++++..|+.+++|.
T Consensus 365 gt~d~~vkiwdlks~~-------~~a~Fpght~~vk~i~FsENGY~Lat~add~~V~lwD-------------------- 417 (506)
T KOG0289|consen 365 GTPDGVVKIWDLKSQT-------NVAKFPGHTGPVKAISFSENGYWLATAADDGSVKLWD-------------------- 417 (506)
T ss_pred cCCCceEEEEEcCCcc-------ccccCCCCCCceeEEEeccCceEEEEEecCCeEEEEE--------------------
Confidence 9999999999998873 3678999999999999974 4555555555444443
Q ss_pred CCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeecccCcee
Q psy4579 278 KGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGL 357 (368)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~ 357 (368)
++..+...++......+|.++.|.+.| .+|+.++.|=.|++++-.+ .....+..+..|.+..+
T Consensus 418 --------LRKl~n~kt~~l~~~~~v~s~~fD~SG-t~L~~~g~~l~Vy~~~k~~--------k~W~~~~~~~~~sg~st 480 (506)
T KOG0289|consen 418 --------LRKLKNFKTIQLDEKKEVNSLSFDQSG-TYLGIAGSDLQVYICKKKT--------KSWTEIKELADHSGLST 480 (506)
T ss_pred --------ehhhcccceeeccccccceeEEEcCCC-CeEEeecceeEEEEEeccc--------ccceeeehhhhcccccc
Confidence 333333333333444589999999999 5666778888888888543 23455556677887788
Q ss_pred eeccee
Q psy4579 358 IEGTYN 363 (368)
Q Consensus 358 ~l~w~p 363 (368)
++.|.-
T Consensus 481 ~v~Fg~ 486 (506)
T KOG0289|consen 481 GVRFGE 486 (506)
T ss_pred eeeecc
Confidence 887764
|
|
| >KOG0308|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=8.2e-21 Score=168.55 Aligned_cols=270 Identities=17% Similarity=0.144 Sum_probs=186.6
Q ss_pred eEec-CCcccccCCCCccccccCcceeeecc---c-cCC-CCCcEEEEEEecCCCc-cccccCCcccCCCCcccCCCCCe
Q psy4579 46 AQWL-PDVTSVQLPNEDAQFDASNYDTDKGT---H-TSD-EQNHLLIASVQLPNED-AQFDASNYDTDKGGNVQLPNEDA 118 (368)
Q Consensus 46 ~~~~-p~~~~l~~~~~~~~~~~~~~~~~~~~---~-~~~-~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~g~i~i~~~~~ 118 (368)
++.+ |.+++|.+||.||.+++|...-..+. . ... +....++..+.+.... ..+.++ .|-+|++|+...
T Consensus 30 Lq~da~~~ryLfTgGRDg~i~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~~~~tlIS~S-----sDtTVK~W~~~~ 104 (735)
T KOG0308|consen 30 LQLDAPNGRYLFTGGRDGIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCGNGKTLISAS-----SDTTVKVWNAHK 104 (735)
T ss_pred ccccCCCCceEEecCCCceEEEeccccccCCcccchhhhhhhhHhHHhhHHhhcCCCceEEec-----CCceEEEeeccc
Confidence 4444 45666999999999988876544432 1 111 2333456666664444 333433 488999999764
Q ss_pred e---eeeccccCCCCceeeEe-cCCCCCeeEEEeCCCcEEEEeCCCCCCCC---cccccceeee-ccccceecceeeEEe
Q psy4579 119 Q---FDASNYDTDKGGYGLSW-NPSLNGYLLSASDDHTICLWDINATPKEN---RVIDAKTIFT-GHTAVVEVRYGLSWN 190 (368)
Q Consensus 119 ~---~~~~~~~h~~~v~~l~~-sp~~~~~lasg~~dg~v~iwd~~~~~~~~---~~~~~~~~~~-~h~~~v~~~~~i~~~ 190 (368)
. +..++..|.+.|.||++ -++. .++|+||.|+.|.+||++++.... ........+. |+..++ |+++-+
T Consensus 105 ~~~~c~stir~H~DYVkcla~~ak~~-~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~si---YSLA~N 180 (735)
T KOG0308|consen 105 DNTFCMSTIRTHKDYVKCLAYIAKNN-ELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSI---YSLAMN 180 (735)
T ss_pred CcchhHhhhhcccchheeeeecccCc-eeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccce---eeeecC
Confidence 3 45567789999999999 6665 899999999999999999763200 0001223333 788887 899999
Q ss_pred CCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee--ecccccCCCCccceEEEEeecCCcccc
Q psy4579 191 PSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LILGTHTSDEQNHLLIASVQLPNEDAQ 268 (368)
Q Consensus 191 p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~ 268 (368)
+. +..|++|+..+-+++||.++..+ +..+.||+..|.++-.+. ..+.++++|+
T Consensus 181 ~t-~t~ivsGgtek~lr~wDprt~~k-------imkLrGHTdNVr~ll~~dDGt~~ls~sSDg----------------- 235 (735)
T KOG0308|consen 181 QT-GTIIVSGGTEKDLRLWDPRTCKK-------IMKLRGHTDNVRVLLVNDDGTRLLSASSDG----------------- 235 (735)
T ss_pred Cc-ceEEEecCcccceEEeccccccc-------eeeeeccccceEEEEEcCCCCeEeecCCCc-----------------
Confidence 98 89999999999999999999843 456779999999888763 2333444444
Q ss_pred cccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCcee
Q psy4579 269 FDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLR 348 (368)
Q Consensus 269 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~ 348 (368)
.+.+|++...++..++. .|...|+++..+|+- ..+.+|+.||.|..=|++.+........+..|+..
T Consensus 236 -----------tIrlWdLgqQrCl~T~~-vH~e~VWaL~~~~sf-~~vYsG~rd~~i~~Tdl~n~~~~tlick~daPv~~ 302 (735)
T KOG0308|consen 236 -----------TIRLWDLGQQRCLATYI-VHKEGVWALQSSPSF-THVYSGGRDGNIYRTDLRNPAKSTLICKEDAPVLK 302 (735)
T ss_pred -----------eEEeeeccccceeeeEE-eccCceEEEeeCCCc-ceEEecCCCCcEEecccCCchhheEeecCCCchhh
Confidence 45555555667777765 899999999999998 56779999999999999975332222222333333
Q ss_pred e--ecccCceeeecce
Q psy4579 349 L--RGHQKEGLIEGTY 362 (368)
Q Consensus 349 ~--~gh~~~V~~l~w~ 362 (368)
+ ..|...|+.-.|.
T Consensus 303 l~~~~~~~~~WvtTtd 318 (735)
T KOG0308|consen 303 LHLHEHDNSVWVTTTD 318 (735)
T ss_pred hhhccccCCceeeecc
Confidence 2 3345666544443
|
|
| >KOG0646|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.5e-20 Score=158.68 Aligned_cols=221 Identities=14% Similarity=0.152 Sum_probs=149.1
Q ss_pred CCCcccCCCCCe-eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCC--cccccceeeeccccceec
Q psy4579 107 KGGNVQLPNEDA-QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKEN--RVIDAKTIFTGHTAVVEV 183 (368)
Q Consensus 107 ~~g~i~i~~~~~-~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~--~~~~~~~~~~~h~~~v~~ 183 (368)
-.|.+.+|.+.. .....+..|-..|+|+.|+-+| .+|+|||.||.|.+|.+....... ...++...+..|+-+|+
T Consensus 101 i~g~lYlWelssG~LL~v~~aHYQ~ITcL~fs~dg-s~iiTgskDg~V~vW~l~~lv~a~~~~~~~p~~~f~~HtlsIT- 178 (476)
T KOG0646|consen 101 ISGNLYLWELSSGILLNVLSAHYQSITCLKFSDDG-SHIITGSKDGAVLVWLLTDLVSADNDHSVKPLHIFSDHTLSIT- 178 (476)
T ss_pred ccCcEEEEEeccccHHHHHHhhccceeEEEEeCCC-cEEEecCCCccEEEEEEEeecccccCCCccceeeeccCcceeE-
Confidence 368899999875 4555667899999999999999 999999999999999986532211 13457899999999997
Q ss_pred ceeeEEeCC-CCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee--ecccccCCCCccceEEEEe
Q psy4579 184 RYGLSWNPS-LNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LILGTHTSDEQNHLLIASV 260 (368)
Q Consensus 184 ~~~i~~~p~-~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~d~~~~~~~~~~ 260 (368)
++...+. -...++|+|.|.++++||+..+. .+.++. ....+.+++.+| ..+..|..++.+.+.....
T Consensus 179 --Dl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~-------LLlti~-fp~si~av~lDpae~~~yiGt~~G~I~~~~~~~ 248 (476)
T KOG0646|consen 179 --DLQIGSGGTNARLYTASEDRTIKLWDLSLGV-------LLLTIT-FPSSIKAVALDPAERVVYIGTEEGKIFQNLLFK 248 (476)
T ss_pred --EEEecCCCccceEEEecCCceEEEEEeccce-------eeEEEe-cCCcceeEEEcccccEEEecCCcceEEeeehhc
Confidence 7776553 25689999999999999998872 233332 456778888876 2333333333333322110
Q ss_pred ecCCcccccccccccCCCCCcccccCCCCceeeeeecCccc--ceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCC
Q psy4579 261 QLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEG--EVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPD 338 (368)
Q Consensus 261 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~--~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~ 338 (368)
.++.........++. .+.....+ .+|.+ +|+|++.+-|| .+|++|+.||.|+|||+..
T Consensus 249 -~~~~~~~v~~k~~~~-----------~~t~~~~~-~Gh~~~~~ITcLais~Dg-tlLlSGd~dg~VcvWdi~S------ 308 (476)
T KOG0646|consen 249 -LSGQSAGVNQKGRHE-----------ENTQINVL-VGHENESAITCLAISTDG-TLLLSGDEDGKVCVWDIYS------ 308 (476)
T ss_pred -CCccccccccccccc-----------ccceeeee-ccccCCcceeEEEEecCc-cEEEeeCCCCCEEEEecch------
Confidence 111111111111211 12222333 38988 99999999999 7999999999999999974
Q ss_pred CCCCCCCceeeecccCceeeeccee
Q psy4579 339 PNGECHPDLRLRGHQKEGLIEGTYN 363 (368)
Q Consensus 339 ~~~~~~~~~~~~gh~~~V~~l~w~p 363 (368)
.+.+.++....++|+.+...|
T Consensus 309 ----~Q~iRtl~~~kgpVtnL~i~~ 329 (476)
T KOG0646|consen 309 ----KQCIRTLQTSKGPVTNLQINP 329 (476)
T ss_pred ----HHHHHHHhhhccccceeEeec
Confidence 222233433566777776643
|
|
| >KOG0772|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.1e-20 Score=163.49 Aligned_cols=187 Identities=19% Similarity=0.236 Sum_probs=139.5
Q ss_pred CCeeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcc----------------------------
Q psy4579 116 EDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRV---------------------------- 167 (368)
Q Consensus 116 ~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~---------------------------- 167 (368)
+.......+.+|.+.|+++++.|.| -.|++|+.|.+|++||+.......+.
T Consensus 155 IP~shEi~l~hgtk~Vsal~~Dp~G-aR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLvvs 233 (641)
T KOG0772|consen 155 IPGSHEIQLKHGTKIVSALAVDPSG-ARFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQILVVS 233 (641)
T ss_pred CCccceEeccCCceEEEEeeecCCC-ceeeeccccceEEEEecccccccchhhhccCcccccccceeeecCCCCeEEEEe
Confidence 3445567788899999999999999 89999999999999999764221100
Q ss_pred ------------------------cccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccc
Q psy4579 168 ------------------------IDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDA 223 (368)
Q Consensus 168 ------------------------~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~ 223 (368)
+.-+...+||...++ |.+|+|.....|+|++.||+++|||+.+......++.+
T Consensus 234 g~aqakl~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt---~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~ 310 (641)
T KOG0772|consen 234 GSAQAKLLDRDGFEIVEFSKGDQYIRDMYNTKGHIAELT---CGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKT 310 (641)
T ss_pred cCcceeEEccCCceeeeeeccchhhhhhhccCCceeeee---ccccccCcccceEEecCCCcEEEEecCCchhheeEEee
Confidence 001224567999997 99999998889999999999999999886543333211
Q ss_pred eeeeecccccEeEEEEee--ecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCccc
Q psy4579 224 KTIFTGHTAVVEDYSIHR--LILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEG 301 (368)
Q Consensus 224 ~~~~~~~~~~v~~v~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~ 301 (368)
+...+..-++...+|++ ..+++++.|+.+.+|.... ..-.....++.+|..
T Consensus 311 -k~~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~--------------------------~~v~p~~~vk~AH~~ 363 (641)
T KOG0772|consen 311 -KPAGGKRVPVTSCAWNRDGKLIAAGCLDGSIQIWDKGS--------------------------RTVRPVMKVKDAHLP 363 (641)
T ss_pred -ccCCCcccCceeeecCCCcchhhhcccCCceeeeecCC--------------------------cccccceEeeeccCC
Confidence 11224556778889985 5688888888888875321 012233445568988
Q ss_pred --ceeEEEEeCCCCcEEEEecCCCeEEEEECCCCC
Q psy4579 302 --EVNRARYMPQNPCVIATKTPSSDVLVFDYTKHP 334 (368)
Q Consensus 302 --~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~ 334 (368)
.|+||.|+++| ++|+|-+.|+++++||+++.+
T Consensus 364 g~~Itsi~FS~dg-~~LlSRg~D~tLKvWDLrq~k 397 (641)
T KOG0772|consen 364 GQDITSISFSYDG-NYLLSRGFDDTLKVWDLRQFK 397 (641)
T ss_pred CCceeEEEecccc-chhhhccCCCceeeeeccccc
Confidence 99999999999 677799999999999999743
|
|
| >KOG0310|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.8e-20 Score=158.63 Aligned_cols=236 Identities=13% Similarity=0.120 Sum_probs=171.2
Q ss_pred cCceeeEecCCcccccCCCCccccccCcceeeeccccCCCCCcEEEEEEecCCCccccccCCcccCCCCcccCCCCCeee
Q psy4579 41 WPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQF 120 (368)
Q Consensus 41 ~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~ 120 (368)
--+.++.|-.||+.|+.|.+.|.|.+++.+...-...... ....+..+.|++.+.....++ +.|+.+++|++++..
T Consensus 69 ~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k~r~iLR~~~a-h~apv~~~~f~~~d~t~l~s~---sDd~v~k~~d~s~a~ 144 (487)
T KOG0310|consen 69 DVVYSVDFRSDGRLLAAGDESGHVKVFDMKSRVILRQLYA-HQAPVHVTKFSPQDNTMLVSG---SDDKVVKYWDLSTAY 144 (487)
T ss_pred cceeEEEeecCCeEEEccCCcCcEEEeccccHHHHHHHhh-ccCceeEEEecccCCeEEEec---CCCceEEEEEcCCcE
Confidence 3467889999999999999999997776433211111111 123466777877776666665 458899999998755
Q ss_pred e-eccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEE
Q psy4579 121 D-ASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLS 199 (368)
Q Consensus 121 ~-~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s 199 (368)
+ ..+.+|++.|.|.+|+|..+.+++|||.||.|++||++.... .+..+ .|..+|. .+.+-|. +.++|+
T Consensus 145 v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~------~v~el-nhg~pVe---~vl~lps-gs~ias 213 (487)
T KOG0310|consen 145 VQAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLTS------RVVEL-NHGCPVE---SVLALPS-GSLIAS 213 (487)
T ss_pred EEEEecCCcceeEeeccccCCCeEEEecCCCceEEEEEeccCCc------eeEEe-cCCCcee---eEEEcCC-CCEEEE
Confidence 4 467899999999999998867999999999999999987631 23333 4888997 9999998 889999
Q ss_pred eeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee--ecccccCCCCccceEEEEeecCCcccccccccccCC
Q psy4579 200 ASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTD 277 (368)
Q Consensus 200 ~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~ 277 (368)
++ ...|++||+.++.+ .+.....|...|+|+.+.. ..+.+++-|+.++++
T Consensus 214 Ag-Gn~vkVWDl~~G~q------ll~~~~~H~KtVTcL~l~s~~~rLlS~sLD~~VKVf--------------------- 265 (487)
T KOG0310|consen 214 AG-GNSVKVWDLTTGGQ------LLTSMFNHNKTVTCLRLASDSTRLLSGSLDRHVKVF--------------------- 265 (487)
T ss_pred cC-CCeEEEEEecCCce------ehhhhhcccceEEEEEeecCCceEeecccccceEEE---------------------
Confidence 87 45899999987642 2344455999999999974 344444444444433
Q ss_pred CCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEE
Q psy4579 278 KGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFD 329 (368)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd 329 (368)
+..+-+....+ .-.++|.+++.+|++ ..++.|..+|.+.+=+
T Consensus 266 -------d~t~~Kvv~s~--~~~~pvLsiavs~dd-~t~viGmsnGlv~~rr 307 (487)
T KOG0310|consen 266 -------DTTNYKVVHSW--KYPGPVLSIAVSPDD-QTVVIGMSNGLVSIRR 307 (487)
T ss_pred -------EccceEEEEee--ecccceeeEEecCCC-ceEEEecccceeeeeh
Confidence 22223333333 467899999999998 5677899999887763
|
|
| >KOG0299|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.7e-19 Score=154.22 Aligned_cols=266 Identities=15% Similarity=0.137 Sum_probs=189.7
Q ss_pred cccccCceeeEecCCcccccCCCCccccccCcceeeecccc--------------CC--C---CCcEEEEEEecCCCccc
Q psy4579 37 HALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHT--------------SD--E---QNHLLIASVQLPNEDAQ 97 (368)
Q Consensus 37 ~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~--------------~~--~---~~~~~i~~~~~~~~~~~ 97 (368)
..+.-|+.||..+||..+..+++.++++ ..|+...|... .. . ....-+.++.+++++.-
T Consensus 139 ~~H~~s~~~vals~d~~~~fsask~g~i--~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~Dgky 216 (479)
T KOG0299|consen 139 GKHQLSVTSVALSPDDKRVFSASKDGTI--LKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSDGKY 216 (479)
T ss_pred ccccCcceEEEeeccccceeecCCCcce--eeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCCCcE
Confidence 4456789999999999999999999987 45555544322 11 0 11223555666555443
Q ss_pred cccCCcccCCCCcccCCCCCe-eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeec
Q psy4579 98 FDASNYDTDKGGNVQLPNEDA-QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTG 176 (368)
Q Consensus 98 ~~~~~~~~~~~g~i~i~~~~~-~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~ 176 (368)
+..+ ..|..|.||+.+. +.+..+.+|.+.|.+++|--.- ..|.+++.|++|++|+++... .+.++.|
T Consensus 217 latg----g~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt-~~lys~s~Drsvkvw~~~~~s-------~vetlyG 284 (479)
T KOG0299|consen 217 LATG----GRDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGT-SELYSASADRSVKVWSIDQLS-------YVETLYG 284 (479)
T ss_pred EEec----CCCceEEEecCcccchhhcccccccceeeeeeecCc-cceeeeecCCceEEEehhHhH-------HHHHHhC
Confidence 3333 3467788999876 4455678999999999998765 889999999999999998753 5678899
Q ss_pred cccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEe-eecccccCCCCccce
Q psy4579 177 HTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIH-RLILGTHTSDEQNHL 255 (368)
Q Consensus 177 h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~-~~~~~~~~~d~~~~~ 255 (368)
|.+.|. +|.-..- ...+-.|+.|+++++|++... ....+.++...+.|++|- ..-+.+++.++.+.+
T Consensus 285 Hqd~v~---~IdaL~r-eR~vtVGgrDrT~rlwKi~ee--------sqlifrg~~~sidcv~~In~~HfvsGSdnG~IaL 352 (479)
T KOG0299|consen 285 HQDGVL---GIDALSR-ERCVTVGGRDRTVRLWKIPEE--------SQLIFRGGEGSIDCVAFINDEHFVSGSDNGSIAL 352 (479)
T ss_pred Ccccee---eechhcc-cceEEeccccceeEEEecccc--------ceeeeeCCCCCeeeEEEecccceeeccCCceEEE
Confidence 999995 8877654 555666669999999999543 345678899899999984 466777887777777
Q ss_pred EEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeec-----------CcccceeEEEEeCCCCcEEEEecCCCe
Q psy4579 256 LIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKI-----------NHEGEVNRARYMPQNPCVIATKTPSSD 324 (368)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~-----------~h~~~i~~~~~~p~~~~~lasgs~Dg~ 324 (368)
|-.. ..++++.... .++..|++++..|.. .++|+||.+|.
T Consensus 353 Ws~~----------------------------KKkplf~~~~AHgv~~~~~~~~~~~Witsla~i~~s-dL~asGS~~G~ 403 (479)
T KOG0299|consen 353 WSLL----------------------------KKKPLFTSRLAHGVIPELDPVNGNFWITSLAVIPGS-DLLASGSWSGC 403 (479)
T ss_pred eeec----------------------------ccCceeEeeccccccCCccccccccceeeeEecccC-ceEEecCCCCc
Confidence 6432 1122222211 234589999999998 79999999999
Q ss_pred EEEEECCCCCCCCCCCCCCCCceeeecccCceeeecceee
Q psy4579 325 VLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYNC 364 (368)
Q Consensus 325 i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p~ 364 (368)
|++|.+.... ....++..+. -.+-|++|+|++.
T Consensus 404 vrLW~i~~g~------r~i~~l~~ls-~~GfVNsl~f~~s 436 (479)
T KOG0299|consen 404 VRLWKIEDGL------RAINLLYSLS-LVGFVNSLAFSNS 436 (479)
T ss_pred eEEEEecCCc------cccceeeecc-cccEEEEEEEccC
Confidence 9999997521 1123332332 5668889998865
|
|
| >KOG2445|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.3e-19 Score=146.11 Aligned_cols=229 Identities=17% Similarity=0.212 Sum_probs=152.8
Q ss_pred ccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEE-eCCCCCeEEEeeCC
Q psy4579 125 YDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSW-NPSLNGYLLSASDD 203 (368)
Q Consensus 125 ~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~-~p~~~~~l~s~s~d 203 (368)
.+|++-|.|+.|.+-| +.+|+|+.|++|+|||.++... ...+....+.|.+.| +.+.| +|..++.+|++|.|
T Consensus 10 s~h~DlihdVs~D~~G-RRmAtCSsDq~vkI~d~~~~s~---~W~~Ts~Wrah~~Si---~rV~WAhPEfGqvvA~cS~D 82 (361)
T KOG2445|consen 10 SGHKDLIHDVSFDFYG-RRMATCSSDQTVKIWDSTSDSG---TWSCTSSWRAHDGSI---WRVVWAHPEFGQVVATCSYD 82 (361)
T ss_pred cCCcceeeeeeecccC-ceeeeccCCCcEEEEeccCCCC---ceEEeeeEEecCCcE---EEEEecCccccceEEEEecC
Confidence 3588999999999999 9999999999999999855432 233556788999999 69999 67889999999999
Q ss_pred CcEEEEECCC--CCCCCccccceeeeecccccEeEEEEee----ecccccCCCCccceEEEE---------e-------e
Q psy4579 204 HTICLWDINA--TPKENRVIDAKTIFTGHTAVVEDYSIHR----LILGTHTSDEQNHLLIAS---------V-------Q 261 (368)
Q Consensus 204 g~i~iwd~~~--~~~~~~~~~~~~~~~~~~~~v~~v~~~~----~~~~~~~~d~~~~~~~~~---------~-------~ 261 (368)
+++.||.-.. .....+.+....++......|++|.|.| +.+++.+.|+.++++-+- + .
T Consensus 83 rtv~iWEE~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~ 162 (361)
T KOG2445|consen 83 RTVSIWEEQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQHEIQNVI 162 (361)
T ss_pred CceeeeeecccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhhhhhhhcc
Confidence 9999997522 2222234555567777888999999986 577888889888887321 0 0
Q ss_pred cCC----------------cccccccccccCC---CCCcccccCCCCc----eeeeeecCcccceeEEEEeCCC---CcE
Q psy4579 262 LPN----------------EDAQFDASNYDTD---KGDFGGFGSVSGK----IEIEIKINHEGEVNRARYMPQN---PCV 315 (368)
Q Consensus 262 ~~~----------------~~~~~~~~~~d~~---~~~~~~~~~~~~~----~~~~~~~~h~~~i~~~~~~p~~---~~~ 315 (368)
.++ ......+...|.. .+...+|....+. ...++ .+|..+|..++|.|+- -.+
T Consensus 163 ~pp~~~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L-~d~~dpI~di~wAPn~Gr~y~~ 241 (361)
T KOG2445|consen 163 DPPGKNKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAEL-PDHTDPIRDISWAPNIGRSYHL 241 (361)
T ss_pred CCcccccCcceEEeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhc-CCCCCcceeeeeccccCCceee
Confidence 000 0011111111110 1111222211111 11122 2799999999999963 248
Q ss_pred EEEecCCCeEEEEECCCCCC--------CCCCCC--CCCCceeeecccCceeeecce
Q psy4579 316 IATKTPSSDVLVFDYTKHPS--------KPDPNG--ECHPDLRLRGHQKEGLIEGTY 362 (368)
Q Consensus 316 lasgs~Dg~i~iwd~~~~~~--------~~~~~~--~~~~~~~~~gh~~~V~~l~w~ 362 (368)
||+++.|| |+||.++.... .+.... ....+..+.+|.++|+.++|+
T Consensus 242 lAvA~kDg-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wN 297 (361)
T KOG2445|consen 242 LAVATKDG-VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWN 297 (361)
T ss_pred EEEeecCc-EEEEEEeeccchhhhhcccCCCCccccceEEeeeccCCCCceEEEEEe
Confidence 99999999 99999984211 111111 112233467899999999997
|
|
| >KOG0267|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.7e-21 Score=174.78 Aligned_cols=198 Identities=19% Similarity=0.263 Sum_probs=157.4
Q ss_pred CCcccCCCCCe-eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceeccee
Q psy4579 108 GGNVQLPNEDA-QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYG 186 (368)
Q Consensus 108 ~g~i~i~~~~~-~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 186 (368)
+-.+.+|.... ..+..+.+|..+|.||.|++.. .+|++|+.+|+|++||++..+ .++++.||...+. +
T Consensus 49 ~~k~~L~~i~kp~~i~S~~~hespIeSl~f~~~E-~LlaagsasgtiK~wDleeAk-------~vrtLtgh~~~~~---s 117 (825)
T KOG0267|consen 49 DEKVNLWAIGKPNAITSLTGHESPIESLTFDTSE-RLLAAGSASGTIKVWDLEEAK-------IVRTLTGHLLNIT---S 117 (825)
T ss_pred ceeeccccccCCchhheeeccCCcceeeecCcch-hhhcccccCCceeeeehhhhh-------hhhhhhccccCcc---e
Confidence 44566777653 3344578999999999999997 899999999999999999764 5689999999986 9
Q ss_pred eEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeee--cccccCCCCccceEEEEeecCC
Q psy4579 187 LSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRL--ILGTHTSDEQNHLLIASVQLPN 264 (368)
Q Consensus 187 i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~--~~~~~~~d~~~~~~~~~~~~~~ 264 (368)
++|+|. +.++++|+.|+.+++||.+.. .|.+.+.+|...|..+.|.|. .+..++.|..
T Consensus 118 v~f~P~-~~~~a~gStdtd~~iwD~Rk~-------Gc~~~~~s~~~vv~~l~lsP~Gr~v~~g~ed~t------------ 177 (825)
T KOG0267|consen 118 VDFHPY-GEFFASGSTDTDLKIWDIRKK-------GCSHTYKSHTRVVDVLRLSPDGRWVASGGEDNT------------ 177 (825)
T ss_pred eeeccc-eEEeccccccccceehhhhcc-------CceeeecCCcceeEEEeecCCCceeeccCCcce------------
Confidence 999998 899999999999999999965 467889999999999999872 3333333322
Q ss_pred cccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCC
Q psy4579 265 EDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECH 344 (368)
Q Consensus 265 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~ 344 (368)
+.+||...|++...+. .|.+.|.++.|+|.. .++++||.|+++++||+++ ..
T Consensus 178 ----------------vki~d~~agk~~~ef~-~~e~~v~sle~hp~e-~Lla~Gs~d~tv~f~dlet----------fe 229 (825)
T KOG0267|consen 178 ----------------VKIWDLTAGKLSKEFK-SHEGKVQSLEFHPLE-VLLAPGSSDRTVRFWDLET----------FE 229 (825)
T ss_pred ----------------eeeecccccccccccc-cccccccccccCchh-hhhccCCCCceeeeeccce----------eE
Confidence 3445555677777776 899999999999998 8999999999999999985 22
Q ss_pred CceeeecccCceeeecceee
Q psy4579 345 PDLRLRGHQKEGLIEGTYNC 364 (368)
Q Consensus 345 ~~~~~~gh~~~V~~l~w~p~ 364 (368)
.+.....-...|.+++|+|.
T Consensus 230 ~I~s~~~~~~~v~~~~fn~~ 249 (825)
T KOG0267|consen 230 VISSGKPETDGVRSLAFNPD 249 (825)
T ss_pred EeeccCCccCCceeeeecCC
Confidence 22233344667777887775
|
|
| >KOG4283|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=8.6e-20 Score=147.83 Aligned_cols=222 Identities=18% Similarity=0.249 Sum_probs=162.5
Q ss_pred ccccCceeeEecCC-cccccCCCCccccccCcceeeecc--ccC----------C---CCCcE-EEEEEec-CCCccccc
Q psy4579 38 ALEWPSLTAQWLPD-VTSVQLPNEDAQFDASNYDTDKGT--HTS----------D---EQNHL-LIASVQL-PNEDAQFD 99 (368)
Q Consensus 38 ~~~~~~~~~~~~p~-~~~l~~~~~~~~~~~~~~~~~~~~--~~~----------~---~~~~~-~i~~~~~-~~~~~~~~ 99 (368)
.+...|.+++-.|. |+++++|+.||.+ ..|++...+ ..+ . +..+. .|.++.| |-+..-+.
T Consensus 41 ~HgGsvNsL~id~tegrymlSGgadgsi--~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmFt 118 (397)
T KOG4283|consen 41 PHGGSVNSLQIDLTEGRYMLSGGADGSI--AVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMFT 118 (397)
T ss_pred cCCCccceeeeccccceEEeecCCCccE--EEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCceee
Confidence 34567888888765 8899999999988 445554333 111 1 11233 4777777 44444344
Q ss_pred cCCcccCCCCcccCCCCCeeeeeccccCCCCceeeEecCCCC--CeeEEEeCCCcEEEEeCCCCCCCCcccccceeeecc
Q psy4579 100 ASNYDTDKGGNVQLPNEDAQFDASNYDTDKGGYGLSWNPSLN--GYLLSASDDHTICLWDINATPKENRVIDAKTIFTGH 177 (368)
Q Consensus 100 ~~~~~~~~~g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~--~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h 177 (368)
.+. =|-++++||.++..+...+.-.+.|++-+++|-.- .++|+|..|-.|++.|+.++. ..+++.||
T Consensus 119 ssS----FDhtlKVWDtnTlQ~a~~F~me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs-------~sH~LsGH 187 (397)
T KOG4283|consen 119 SSS----FDHTLKVWDTNTLQEAVDFKMEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGS-------FSHTLSGH 187 (397)
T ss_pred ccc----ccceEEEeecccceeeEEeecCceeehhhcChhhhcceEEEEecCCCcEEEEeccCCc-------ceeeeccc
Confidence 333 36899999999877777777889999999998541 478889999999999999986 56899999
Q ss_pred ccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeeecccccCCCCccceEE
Q psy4579 178 TAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLI 257 (368)
Q Consensus 178 ~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~ 257 (368)
.+.| +++.|+|...-.|++||.||.|++||+|... .+...+..|...
T Consensus 188 r~~v---laV~Wsp~~e~vLatgsaDg~irlWDiRras------gcf~~lD~hn~k------------------------ 234 (397)
T KOG4283|consen 188 RDGV---LAVEWSPSSEWVLATGSADGAIRLWDIRRAS------GCFRVLDQHNTK------------------------ 234 (397)
T ss_pred cCce---EEEEeccCceeEEEecCCCceEEEEEeeccc------ceeEEeecccCc------------------------
Confidence 9999 6999999866679999999999999998753 244444444320
Q ss_pred EEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCC
Q psy4579 258 ASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKP 337 (368)
Q Consensus 258 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~ 337 (368)
..+..+...+|.+.|+.++|..++ ..+++++.|..+++|+..+.....
T Consensus 235 -------------------------------~~p~~~~n~ah~gkvngla~tSd~-~~l~~~gtd~r~r~wn~~~G~ntl 282 (397)
T KOG4283|consen 235 -------------------------------RPPILKTNTAHYGKVNGLAWTSDA-RYLASCGTDDRIRVWNMESGRNTL 282 (397)
T ss_pred -------------------------------cCccccccccccceeeeeeecccc-hhhhhccCccceEEeecccCcccc
Confidence 001111224899999999999999 567799999999999987755443
|
|
| >KOG0269|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=9.7e-21 Score=171.14 Aligned_cols=246 Identities=12% Similarity=0.194 Sum_probs=174.4
Q ss_pred CceeeEecC-CcccccCCCCccccccCcceeee-ccccCCC-CCcEEEEEEecCCCccccccCCcccCCCCcccCCCCCe
Q psy4579 42 PSLTAQWLP-DVTSVQLPNEDAQFDASNYDTDK-GTHTSDE-QNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDA 118 (368)
Q Consensus 42 ~~~~~~~~p-~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~ 118 (368)
.+..|+|.. +.+++|+++..|.|.+|+..... ....... .....+.++.|......+..++ +.||.|++||+..
T Consensus 89 S~~DVkW~~~~~NlIAT~s~nG~i~vWdlnk~~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSG---SQDg~vK~~DlR~ 165 (839)
T KOG0269|consen 89 SAADVKWGQLYSNLIATCSTNGVISVWDLNKSIRNKLLTVFNEHERSANKLDFHSTEPNILISG---SQDGTVKCWDLRS 165 (839)
T ss_pred ehhhcccccchhhhheeecCCCcEEEEecCccccchhhhHhhhhccceeeeeeccCCccEEEec---CCCceEEEEeeec
Confidence 444566652 47789999999999766554321 1111111 1234578888865555555555 5699999999865
Q ss_pred -eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeE
Q psy4579 119 -QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYL 197 (368)
Q Consensus 119 -~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l 197 (368)
....++++....|..++|+|.-++.++++...|.+++||++.... +...+.+|.++| +|+.|+|+ ..+|
T Consensus 166 ~~S~~t~~~nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r------~~~k~~AH~GpV---~c~nwhPn-r~~l 235 (839)
T KOG0269|consen 166 KKSKSTFRSNSESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDR------CEKKLTAHNGPV---LCLNWHPN-REWL 235 (839)
T ss_pred ccccccccccchhhhceeeccCCCceEEEecCCceEEEeeccCchh------HHHHhhcccCce---EEEeecCC-Ccee
Confidence 445566778889999999998778999999999999999998753 667889999999 59999997 9999
Q ss_pred EEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee---ecccccCCCCccceEEEEeecCCcccccccccc
Q psy4579 198 LSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR---LILGTHTSDEQNHLLIASVQLPNEDAQFDASNY 274 (368)
Q Consensus 198 ~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~---~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 274 (368)
||||.|+.|+|||+.+... .++.++. ...+|..|.|.| ..+++++--....
T Consensus 236 ATGGRDK~vkiWd~t~~~~-----~~~~tIn-Tiapv~rVkWRP~~~~hLAtcsmv~dts-------------------- 289 (839)
T KOG0269|consen 236 ATGGRDKMVKIWDMTDSRA-----KPKHTIN-TIAPVGRVKWRPARSYHLATCSMVVDTS-------------------- 289 (839)
T ss_pred eecCCCccEEEEeccCCCc-----cceeEEe-ecceeeeeeeccCccchhhhhhccccce--------------------
Confidence 9999999999999986532 2233333 456899999986 3344433211111
Q ss_pred cCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCC
Q psy4579 275 DTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 275 d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
+.+||++..-+.......|...++.++|.......+.+++.||+|..-.++.
T Consensus 290 ------V~VWDvrRPYIP~~t~~eH~~~vt~i~W~~~d~~~l~s~sKD~tv~qh~~kn 341 (839)
T KOG0269|consen 290 ------VHVWDVRRPYIPYATFLEHTDSVTGIAWDSGDRINLWSCSKDGTVLQHLFKN 341 (839)
T ss_pred ------EEEEeeccccccceeeeccCccccceeccCCCceeeEeecCccHHHHhhhhc
Confidence 2333333344445555589999999999875546777999999988766543
|
|
| >KOG1332|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.2e-20 Score=147.40 Aligned_cols=246 Identities=14% Similarity=0.138 Sum_probs=172.5
Q ss_pred eeEecCCcccccCCCCccccccCcceeeec-cccCCCCC-cEEEEEEecC-CCccccccCCcccCCCCcccCCCCCeee-
Q psy4579 45 TAQWLPDVTSVQLPNEDAQFDASNYDTDKG-THTSDEQN-HLLIASVQLP-NEDAQFDASNYDTDKGGNVQLPNEDAQF- 120 (368)
Q Consensus 45 ~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~i~~~~~~-~~~~~~~~~~~~~~~~g~i~i~~~~~~~- 120 (368)
+++-.--|++||+++.|+.|+|+.-+-..+ ....+... .-.+..+.|- +.-..+.++- +.||+|.||..++..
T Consensus 16 da~lDyygkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLASc---sYDgkVIiWke~~g~w 92 (299)
T KOG1332|consen 16 DAQLDYYGKRLATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASC---SYDGKVIIWKEENGRW 92 (299)
T ss_pred HhhhhhhcceeeeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEe---ecCceEEEEecCCCch
Confidence 344444699999999999996664433332 12222222 2346666662 2333444443 458999999987542
Q ss_pred --eeccccCCCCceeeEecCCCC-CeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCC--C-
Q psy4579 121 --DASNYDTDKGGYGLSWNPSLN-GYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSL--N- 194 (368)
Q Consensus 121 --~~~~~~h~~~v~~l~~sp~~~-~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~--~- 194 (368)
......|+..|++++|-|.+- -.||+++.||.|.|.+.+....- ...+...+|.-.|+ +++|.|.. +
T Consensus 93 ~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w----~t~ki~~aH~~Gvn---sVswapa~~~g~ 165 (299)
T KOG1332|consen 93 TKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGW----TTSKIVFAHEIGVN---SVSWAPASAPGS 165 (299)
T ss_pred hhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCc----cchhhhhccccccc---eeeecCcCCCcc
Confidence 334567999999999999741 48999999999999998765211 13456778998896 99999851 1
Q ss_pred ----------CeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee------ecccccCCCCccceEEE
Q psy4579 195 ----------GYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR------LILGTHTSDEQNHLLIA 258 (368)
Q Consensus 195 ----------~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~------~~~~~~~~d~~~~~~~~ 258 (368)
..|+||+.|..|+||+...+. +.....+.+|.+.|.+++|.| ..+++++.|+.+.+|..
T Consensus 166 ~~~~~~~~~~krlvSgGcDn~VkiW~~~~~~-----w~~e~~l~~H~dwVRDVAwaP~~gl~~s~iAS~SqDg~viIwt~ 240 (299)
T KOG1332|consen 166 LVDQGPAAKVKRLVSGGCDNLVKIWKFDSDS-----WKLERTLEGHKDWVRDVAWAPSVGLPKSTIASCSQDGTVIIWTK 240 (299)
T ss_pred ccccCcccccceeeccCCccceeeeecCCcc-----hhhhhhhhhcchhhhhhhhccccCCCceeeEEecCCCcEEEEEe
Confidence 359999999999999988752 334456899999999999987 35778888777766644
Q ss_pred EeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCC
Q psy4579 259 SVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 259 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
.... ++-..++.......+..+.|++.| ++|+.++.|..|.+|.-..
T Consensus 241 ~~e~--------------------------e~wk~tll~~f~~~~w~vSWS~sG-n~LaVs~GdNkvtlwke~~ 287 (299)
T KOG1332|consen 241 DEEY--------------------------EPWKKTLLEEFPDVVWRVSWSLSG-NILAVSGGDNKVTLWKENV 287 (299)
T ss_pred cCcc--------------------------CcccccccccCCcceEEEEEeccc-cEEEEecCCcEEEEEEeCC
Confidence 3110 111122222346789999999999 7999999999999998764
|
|
| >KOG0289|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.5e-19 Score=153.41 Aligned_cols=196 Identities=23% Similarity=0.299 Sum_probs=153.2
Q ss_pred EEEEecCCCccccccCCcccCCCCcccCCCCCe-eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCC
Q psy4579 86 IASVQLPNEDAQFDASNYDTDKGGNVQLPNEDA-QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKE 164 (368)
Q Consensus 86 i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~-~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~ 164 (368)
+..+.+.+....+...+ .|..+.++|... +.+..+.+|...|+.+.++|+. ..+++++.|..|+||......
T Consensus 222 i~ald~~~s~~~ilTGG----~d~~av~~d~~s~q~l~~~~Gh~kki~~v~~~~~~-~~v~~aSad~~i~vws~~~~s-- 294 (506)
T KOG0289|consen 222 ITALDIIPSSSKILTGG----EDKTAVLFDKPSNQILATLKGHTKKITSVKFHKDL-DTVITASADEIIRVWSVPLSS-- 294 (506)
T ss_pred eeEEeecCCCCcceecC----CCCceEEEecchhhhhhhccCcceEEEEEEeccch-hheeecCCcceEEeecccccc--
Confidence 44454433233333333 567788888764 6677788999999999999998 899999999999999987654
Q ss_pred CcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeec--ccccEeEEEEee-
Q psy4579 165 NRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTG--HTAVVEDYSIHR- 241 (368)
Q Consensus 165 ~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~--~~~~v~~v~~~~- 241 (368)
.......|..+|+ .+.-+|. +.||++++.||+..+.|++++. .+..... ..-.+++.+|||
T Consensus 295 -----~~~~~~~h~~~V~---~ls~h~t-geYllsAs~d~~w~Fsd~~~g~-------~lt~vs~~~s~v~~ts~~fHpD 358 (506)
T KOG0289|consen 295 -----EPTSSRPHEEPVT---GLSLHPT-GEYLLSASNDGTWAFSDISSGS-------QLTVVSDETSDVEYTSAAFHPD 358 (506)
T ss_pred -----Cccccccccccce---eeeeccC-CcEEEEecCCceEEEEEccCCc-------EEEEEeeccccceeEEeeEcCC
Confidence 3466788999996 9999999 9999999999999999999983 2222221 223478999997
Q ss_pred -ecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEec
Q psy4579 242 -LILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKT 320 (368)
Q Consensus 242 -~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs 320 (368)
++++++..|+.+++|..+ ++.....+. +|.++|..++|+.+| ++||+++
T Consensus 359 gLifgtgt~d~~vkiwdlk----------------------------s~~~~a~Fp-ght~~vk~i~FsENG-Y~Lat~a 408 (506)
T KOG0289|consen 359 GLIFGTGTPDGVVKIWDLK----------------------------SQTNVAKFP-GHTGPVKAISFSENG-YWLATAA 408 (506)
T ss_pred ceEEeccCCCceEEEEEcC----------------------------CccccccCC-CCCCceeEEEeccCc-eEEEEEe
Confidence 788888888777776543 233334444 899999999999999 8999999
Q ss_pred CCCeEEEEECCCCC
Q psy4579 321 PSSDVLVFDYTKHP 334 (368)
Q Consensus 321 ~Dg~i~iwd~~~~~ 334 (368)
.|+.|++||+|+..
T Consensus 409 dd~~V~lwDLRKl~ 422 (506)
T KOG0289|consen 409 DDGSVKLWDLRKLK 422 (506)
T ss_pred cCCeEEEEEehhhc
Confidence 99999999999854
|
|
| >KOG0301|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=6.8e-20 Score=163.88 Aligned_cols=251 Identities=17% Similarity=0.239 Sum_probs=183.1
Q ss_pred hhhhhhhhhh-cCcchheeecccccccCceeeEecC-CcccccCCCCccccccCcceeeeccccCCCCCc-EEEEEEecC
Q psy4579 16 INEEYKIWKK-NTPFLYDLVMTHALEWPSLTAQWLP-DVTSVQLPNEDAQFDASNYDTDKGTHTSDEQNH-LLIASVQLP 92 (368)
Q Consensus 16 ~~~~~~~w~~-~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~ 92 (368)
.++++|+|.+ +-.++-.+.......|-..++.|.+ ++-++.+|+.|.++. .|........+....| ..|.++..-
T Consensus 33 Rd~t~~vw~~~~~~~l~~~~~~~~~g~i~~~i~y~e~~~~~l~~g~~D~~i~--v~~~~~~~P~~~LkgH~snVC~ls~~ 110 (745)
T KOG0301|consen 33 RDGTVKVWAKKGKQYLETHAFEGPKGFIANSICYAESDKGRLVVGGMDTTII--VFKLSQAEPLYTLKGHKSNVCSLSIG 110 (745)
T ss_pred CCCceeeeeccCcccccceecccCcceeeccceeccccCcceEeecccceEE--EEecCCCCchhhhhccccceeeeecC
Confidence 4677999998 4444443444444555555577775 444588999999984 5555555544443333 347777765
Q ss_pred CCccccccCCcccCCCCcccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccce
Q psy4579 93 NEDAQFDASNYDTDKGGNVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKT 172 (368)
Q Consensus 93 ~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~ 172 (368)
.... +..+.| |.++++|... +....+.+|+..|++++.-|++ .++|||.|++|++|.-.+ ..+
T Consensus 111 ~~~~-~iSgSW----D~TakvW~~~-~l~~~l~gH~asVWAv~~l~e~--~~vTgsaDKtIklWk~~~---------~l~ 173 (745)
T KOG0301|consen 111 EDGT-LISGSW----DSTAKVWRIG-ELVYSLQGHTASVWAVASLPEN--TYVTGSADKTIKLWKGGT---------LLK 173 (745)
T ss_pred CcCc-eEeccc----ccceEEecch-hhhcccCCcchheeeeeecCCC--cEEeccCcceeeeccCCc---------hhh
Confidence 5544 333333 6789999875 4555689999999999999985 899999999999998743 568
Q ss_pred eeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEe--eecccccCCC
Q psy4579 173 IFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIH--RLILGTHTSD 250 (368)
Q Consensus 173 ~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~--~~~~~~~~~d 250 (368)
+|.||++-|+ ++++-+ +..|+|++.||.|++|++.. .++..+.+|+..|++++.. ...+.+++.|
T Consensus 174 tf~gHtD~VR---gL~vl~--~~~flScsNDg~Ir~w~~~g--------e~l~~~~ghtn~vYsis~~~~~~~Ivs~gED 240 (745)
T KOG0301|consen 174 TFSGHTDCVR---GLAVLD--DSHFLSCSNDGSIRLWDLDG--------EVLLEMHGHTNFVYSISMALSDGLIVSTGED 240 (745)
T ss_pred hhccchhhee---eeEEec--CCCeEeecCCceEEEEeccC--------ceeeeeeccceEEEEEEecCCCCeEEEecCC
Confidence 9999999998 999988 46789999999999999944 4578889999999999842 3566677777
Q ss_pred CccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCccc-ceeEEEEeCCCCcEEEEecCCCeEEEEE
Q psy4579 251 EQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEG-EVNRARYMPQNPCVIATKTPSSDVLVFD 329 (368)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~-~i~~~~~~p~~~~~lasgs~Dg~i~iwd 329 (368)
++.++|-.. .+...+ .|.. .|+++.+-++|+ + ++|+.||.||||.
T Consensus 241 rtlriW~~~------------------------------e~~q~I--~lPttsiWsa~~L~NgD-I-vvg~SDG~VrVfT 286 (745)
T KOG0301|consen 241 RTLRIWKKD------------------------------ECVQVI--TLPTTSIWSAKVLLNGD-I-VVGGSDGRVRVFT 286 (745)
T ss_pred ceEEEeecC------------------------------ceEEEE--ecCccceEEEEEeeCCC-E-EEeccCceEEEEE
Confidence 777776321 222222 3555 899999999994 4 4889999999998
Q ss_pred CCC
Q psy4579 330 YTK 332 (368)
Q Consensus 330 ~~~ 332 (368)
.++
T Consensus 287 ~~k 289 (745)
T KOG0301|consen 287 VDK 289 (745)
T ss_pred ecc
Confidence 774
|
|
| >KOG0300|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.1e-19 Score=147.04 Aligned_cols=283 Identities=16% Similarity=0.169 Sum_probs=197.1
Q ss_pred hhhhhhhhhcCcchheeecccccccCceeeEecCCcccccCCCCccccccCcceeeeccccCC-CCCcEEEEEEecCCCc
Q psy4579 17 NEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSD-EQNHLLIASVQLPNED 95 (368)
Q Consensus 17 ~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~ 95 (368)
+..-.||...+..++-..-- +...+.|++|+|.+.+++++|.|++-.||.+.......... ..++..-....-....
T Consensus 169 DhTA~iWs~Esg~CL~~Y~G--H~GSVNsikfh~s~~L~lTaSGD~taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~ 246 (481)
T KOG0300|consen 169 DHTARIWSLESGACLATYTG--HTGSVNSIKFHNSGLLLLTASGDETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEH 246 (481)
T ss_pred ccceeEEeeccccceeeecc--cccceeeEEeccccceEEEccCCcchHHHHHhhcCcCCCCCCCCCCCchhhhhccccc
Confidence 34456777777766644333 35689999999999999999999998778755443222111 0000000000011000
Q ss_pred cccccCCcccCCCCcccCCCCCe-eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceee
Q psy4579 96 AQFDASNYDTDKGGNVQLPNEDA-QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIF 174 (368)
Q Consensus 96 ~~~~~~~~~~~~~g~i~i~~~~~-~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~ 174 (368)
.. ..|+..+.=...- ..+..+.+|.+.|.+..|-..| +.+++++.|.+..+||++++. ++..+
T Consensus 247 ~~--------d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg-~Q~vTaSWDRTAnlwDVEtge-------~v~~L 310 (481)
T KOG0300|consen 247 NR--------DTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGG-QQMVTASWDRTANLWDVETGE-------VVNIL 310 (481)
T ss_pred cc--------ccccccccCCceeeeeeeeeeccccceEehhhhcCc-ceeeeeeccccceeeeeccCc-------eeccc
Confidence 00 0112221110011 2244567899999999999998 999999999999999999984 67899
Q ss_pred eccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee-ecccccCCCCcc
Q psy4579 175 TGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR-LILGTHTSDEQN 253 (368)
Q Consensus 175 ~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~-~~~~~~~~d~~~ 253 (368)
.||..+.+ .++-+|. ..++++.|.|-+.++||.+.. +..+..|+||+..|+++.|+. ..+.+++.|.++
T Consensus 311 tGHd~ELt---HcstHpt-QrLVvTsSrDtTFRLWDFRea------I~sV~VFQGHtdtVTS~vF~~dd~vVSgSDDrTv 380 (481)
T KOG0300|consen 311 TGHDSELT---HCSTHPT-QRLVVTSSRDTTFRLWDFREA------IQSVAVFQGHTDTVTSVVFNTDDRVVSGSDDRTV 380 (481)
T ss_pred cCcchhcc---ccccCCc-ceEEEEeccCceeEeccchhh------cceeeeecccccceeEEEEecCCceeecCCCceE
Confidence 99999997 8888998 899999999999999999854 355788999999999999984 566777788888
Q ss_pred ceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCC
Q psy4579 254 HLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKH 333 (368)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~ 333 (368)
++|...- -...+.+++ -..+++.++.+..+ .+||.--....|++||++..
T Consensus 381 KvWdLrN---------------------------MRsplATIR--tdS~~NRvavs~g~-~iIAiPhDNRqvRlfDlnG~ 430 (481)
T KOG0300|consen 381 KVWDLRN---------------------------MRSPLATIR--TDSPANRVAVSKGH-PIIAIPHDNRQVRLFDLNGN 430 (481)
T ss_pred EEeeecc---------------------------ccCcceeee--cCCccceeEeecCC-ceEEeccCCceEEEEecCCC
Confidence 8775531 012233333 56789999999887 58888778889999999853
Q ss_pred CCCCCCCCCCCCceeeecccCceeeeccee
Q psy4579 334 PSKPDPNGECHPDLRLRGHQKEGLIEGTYN 363 (368)
Q Consensus 334 ~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p 363 (368)
..- ..|-..-+||...|.|++|.-
T Consensus 431 Rla------RlPrtsRqgHrRMV~c~AW~e 454 (481)
T KOG0300|consen 431 RLA------RLPRTSRQGHRRMVTCCAWLE 454 (481)
T ss_pred ccc------cCCcccccccceeeeeeeccc
Confidence 221 122223469999999999973
|
|
| >KOG0643|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.3e-19 Score=142.52 Aligned_cols=214 Identities=14% Similarity=0.206 Sum_probs=154.6
Q ss_pred eccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEee
Q psy4579 122 ASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSAS 201 (368)
Q Consensus 122 ~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s 201 (368)
.-+.+|.++++-++++.+| .+|.+|+.|.+..+|-.-++. .+.++.||++.| |+++..-+ ..++++|+
T Consensus 4 i~l~GHERplTqiKyN~eG-DLlFscaKD~~~~vw~s~nGe-------rlGty~GHtGav---W~~Did~~-s~~liTGS 71 (327)
T KOG0643|consen 4 ILLQGHERPLTQIKYNREG-DLLFSCAKDSTPTVWYSLNGE-------RLGTYDGHTGAV---WCCDIDWD-SKHLITGS 71 (327)
T ss_pred cccccCccccceEEecCCC-cEEEEecCCCCceEEEecCCc-------eeeeecCCCceE---EEEEecCC-cceeeecc
Confidence 3467899999999999999 999999999999999876664 468999999999 79999887 89999999
Q ss_pred CCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee---eccccc-CCCCc-cceEEEEee--------------c
Q psy4579 202 DDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR---LILGTH-TSDEQ-NHLLIASVQ--------------L 262 (368)
Q Consensus 202 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~---~~~~~~-~~d~~-~~~~~~~~~--------------~ 262 (368)
.|.+++|||+.+++ .+..++ ...+|..+.|+. .++.+. ...+. ..+-+..+. +
T Consensus 72 AD~t~kLWDv~tGk-------~la~~k-~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI 143 (327)
T KOG0643|consen 72 ADQTAKLWDVETGK-------QLATWK-TNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKI 143 (327)
T ss_pred ccceeEEEEcCCCc-------EEEEee-cCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEe
Confidence 99999999999984 344444 456677777763 111111 11111 111111111 0
Q ss_pred CCcccccccccc---------cCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCC
Q psy4579 263 PNEDAQFDASNY---------DTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKH 333 (368)
Q Consensus 263 ~~~~~~~~~~~~---------d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~ 333 (368)
+..+.......| -.+.|.+..||.++|.........|...|+.++++|+. .+++|||.|.+-++||++.
T Consensus 144 ~t~~skit~a~Wg~l~~~ii~Ghe~G~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d~-T~FiT~s~Dttakl~D~~t- 221 (327)
T KOG0643|consen 144 PTPDSKITSALWGPLGETIIAGHEDGSISIYDARTGKELVDSDEEHSSKINDLQFSRDR-TYFITGSKDTTAKLVDVRT- 221 (327)
T ss_pred cCCccceeeeeecccCCEEEEecCCCcEEEEEcccCceeeechhhhccccccccccCCc-ceEEecccCccceeeeccc-
Confidence 011111122222 24567788899999988777766899999999999999 6888999999999999986
Q ss_pred CCCCCCCCCCCCceeeecccCceeeecceeeeec
Q psy4579 334 PSKPDPNGECHPDLRLRGHQKEGLIEGTYNCYLQ 367 (368)
Q Consensus 334 ~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p~~~~ 367 (368)
...++++ --..+|++.+.+|.+.+
T Consensus 222 ---------l~v~Kty-~te~PvN~aaisP~~d~ 245 (327)
T KOG0643|consen 222 ---------LEVLKTY-TTERPVNTAAISPLLDH 245 (327)
T ss_pred ---------eeeEEEe-eecccccceecccccce
Confidence 2333333 34678999999997643
|
|
| >KOG2096|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.4e-20 Score=152.53 Aligned_cols=299 Identities=16% Similarity=0.171 Sum_probs=176.4
Q ss_pred CCCcCccchHHH-----Hhhhh--hhhhhhhhcCcchheeeccccc---ccCceeeEecCCcccccCCCCccccccCcce
Q psy4579 1 MFLKKPFDDAVE-----ERVIN--EEYKIWKKNTPFLYDLVMTHAL---EWPSLTAQWLPDVTSVQLPNEDAQFDASNYD 70 (368)
Q Consensus 1 ~~~~~~~~~~~~-----~~~~~--~~~~~w~~~~~~~~~~~~~~~~---~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~ 70 (368)
|..++|+|+..+ ....+ ++-..|+++.|..-.-+..+.+ .--+.+++|+.||+.|++++.|+.+++|..+
T Consensus 37 ~a~~~p~D~v~~~~s~~p~kkk~hqr~~~~k~~q~~f~Hpl~~~~LKgH~~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~ 116 (420)
T KOG2096|consen 37 EAVDVPMDEVTETISEEPVKKKKHQRNDQWKAKQPTFVHPLNVSVLKGHKKEVTDVAFSSDGKKLATISGDRSIRLWDVR 116 (420)
T ss_pred hhccCCCCcccCccccCCcchhcccchhhhcccCCCcccchhhhhhhccCCceeeeEEcCCCceeEEEeCCceEEEEecc
Confidence 456778887755 11111 2234488887765544444433 4458999999999999999999999887654
Q ss_pred ee-eccccCCCC--------------------------CcEEEEEEecCCCcc-----------------ccccCCc---
Q psy4579 71 TD-KGTHTSDEQ--------------------------NHLLIASVQLPNEDA-----------------QFDASNY--- 103 (368)
Q Consensus 71 ~~-~~~~~~~~~--------------------------~~~~i~~~~~~~~~~-----------------~~~~~~~--- 103 (368)
-- ...|..-.+ +.+.+..+.-..++. ......+
T Consensus 117 DF~~~eHr~~R~nve~dhpT~V~FapDc~s~vv~~~~g~~l~vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA 196 (420)
T KOG2096|consen 117 DFENKEHRCIRQNVEYDHPTRVVFAPDCKSVVVSVKRGNKLCVYKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIA 196 (420)
T ss_pred hhhhhhhhHhhccccCCCceEEEECCCcceEEEEEccCCEEEEEEeeecccCCCCcccccccccccchhcccceEEEeec
Confidence 11 111111100 011111111000000 0000001
Q ss_pred -------ccCCCCcccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCC-CCcccccceeee
Q psy4579 104 -------DTDKGGNVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPK-ENRVIDAKTIFT 175 (368)
Q Consensus 104 -------~~~~~g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~-~~~~~~~~~~~~ 175 (368)
..+.|-.|.+|++.++.+......+..-+..+.||+| +++|+++....|++|.+--++. ..+.......++
T Consensus 197 ~~~k~imsas~dt~i~lw~lkGq~L~~idtnq~~n~~aavSP~G-RFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~Lk 275 (420)
T KOG2096|consen 197 GNAKYIMSASLDTKICLWDLKGQLLQSIDTNQSSNYDAAVSPDG-RFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLK 275 (420)
T ss_pred CCceEEEEecCCCcEEEEecCCceeeeeccccccccceeeCCCC-cEEEEecCCCCceEEEEEeccCcchhhhhhhheec
Confidence 1145677889999988777666666667778999999 9999999999999999753321 111222456789
Q ss_pred ccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeeecccccCCCCccce
Q psy4579 176 GHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHL 255 (368)
Q Consensus 176 ~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~ 255 (368)
||...|. .++|+++ +..++|.|.||+++|||+.-.....+--..++... .+ +.++++ ..
T Consensus 276 GH~saV~---~~aFsn~-S~r~vtvSkDG~wriwdtdVrY~~~qDpk~Lk~g~---~p---------l~aag~----~p- 334 (420)
T KOG2096|consen 276 GHQSAVL---AAAFSNS-STRAVTVSKDGKWRIWDTDVRYEAGQDPKILKEGS---AP---------LHAAGS----EP- 334 (420)
T ss_pred cchhhee---eeeeCCC-cceeEEEecCCcEEEeeccceEecCCCchHhhcCC---cc---------hhhcCC----Cc-
Confidence 9999996 9999998 99999999999999999875422111000011110 00 000000 00
Q ss_pred EEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEE
Q psy4579 256 LIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFD 329 (368)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd 329 (368)
.++.+.+++..+.+. + ...+..+..++|+....+...|...|.+++|+|+| .++||+ .|..+++..
T Consensus 335 --~RL~lsP~g~~lA~s-~---gs~l~~~~se~g~~~~~~e~~h~~~Is~is~~~~g-~~~atc-Gdr~vrv~~ 400 (420)
T KOG2096|consen 335 --VRLELSPSGDSLAVS-F---GSDLKVFASEDGKDYPELEDIHSTTISSISYSSDG-KYIATC-GDRYVRVIR 400 (420)
T ss_pred --eEEEeCCCCcEEEee-c---CCceEEEEcccCccchhHHHhhcCceeeEEecCCC-cEEeee-cceeeeeec
Confidence 011222222222211 0 01133344445555556666899999999999999 678785 578888875
|
|
| >KOG0640|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=5.9e-20 Score=149.75 Aligned_cols=197 Identities=20% Similarity=0.268 Sum_probs=143.0
Q ss_pred eccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCC-----------CCcccccceeeeccccceecceeeEEe
Q psy4579 122 ASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPK-----------ENRVIDAKTIFTGHTAVVEVRYGLSWN 190 (368)
Q Consensus 122 ~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~-----------~~~~~~~~~~~~~h~~~v~~~~~i~~~ 190 (368)
..+..|+.++.+.+|+|+| .++|+|+.|-+|+|.|++..-. ...-...++++..|..+|+ ++.|+
T Consensus 106 ~ylt~HK~~cR~aafs~DG-~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn---~l~FH 181 (430)
T KOG0640|consen 106 KYLTSHKSPCRAAAFSPDG-SLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVN---DLDFH 181 (430)
T ss_pred EEEeecccceeeeeeCCCC-cEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCccc---ceeec
Confidence 4456799999999999999 9999999999999999982110 0111235788999999997 99999
Q ss_pred CCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee--ecccccCCCCccceE------------
Q psy4579 191 PSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LILGTHTSDEQNHLL------------ 256 (368)
Q Consensus 191 p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~d~~~~~~------------ 256 (368)
|. ...|++|+.|++|+++|...... + +..+.++ ...+|.+++|+| ..+..+......+++
T Consensus 182 Pr-e~ILiS~srD~tvKlFDfsK~sa-K---rA~K~~q-d~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T~Qcfvsan 255 (430)
T KOG0640|consen 182 PR-ETILISGSRDNTVKLFDFSKTSA-K---RAFKVFQ-DTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNTYQCFVSAN 255 (430)
T ss_pred ch-hheEEeccCCCeEEEEecccHHH-H---HHHHHhh-ccceeeeEeecCCCceEEEecCCCceeEEeccceeEeeecC
Confidence 99 99999999999999999976421 1 1122332 456789999987 222222222333333
Q ss_pred --------EEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCccc-ceeEEEEeCCCCcEEEEecCCCeEEE
Q psy4579 257 --------IASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEG-EVNRARYMPQNPCVIATKTPSSDVLV 327 (368)
Q Consensus 257 --------~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~-~i~~~~~~p~~~~~lasgs~Dg~i~i 327 (368)
+..+..+.....+... ...|.+.+||-.+++++.++..+|.+ .|.+..|..++.++| +.+.|..+++
T Consensus 256 Pd~qht~ai~~V~Ys~t~~lYvTa---SkDG~IklwDGVS~rCv~t~~~AH~gsevcSa~Ftkn~kyiL-sSG~DS~vkL 331 (430)
T KOG0640|consen 256 PDDQHTGAITQVRYSSTGSLYVTA---SKDGAIKLWDGVSNRCVRTIGNAHGGSEVCSAVFTKNGKYIL-SSGKDSTVKL 331 (430)
T ss_pred cccccccceeEEEecCCccEEEEe---ccCCcEEeeccccHHHHHHHHhhcCCceeeeEEEccCCeEEe-ecCCcceeee
Confidence 2233333333333333 34577999999999999988888876 789999999995555 7789999999
Q ss_pred EECCC
Q psy4579 328 FDYTK 332 (368)
Q Consensus 328 wd~~~ 332 (368)
|.+..
T Consensus 332 WEi~t 336 (430)
T KOG0640|consen 332 WEIST 336 (430)
T ss_pred eeecC
Confidence 99976
|
|
| >KOG2919|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.1e-19 Score=148.97 Aligned_cols=309 Identities=14% Similarity=0.149 Sum_probs=185.1
Q ss_pred chHHHHhhhhhhhhhhhhcCcchheeecc-ccccc-----C---ceeeEecCCcccccCCCCccccccCcceeeeccccC
Q psy4579 8 DDAVEERVINEEYKIWKKNTPFLYDLVMT-HALEW-----P---SLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTS 78 (368)
Q Consensus 8 ~~~~~~~~~~~~~~~w~~~~~~~~~~~~~-~~~~~-----~---~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 78 (368)
+...|..+.+++-++|.. .+.+-.+.. ...-| | --.+.|+|||+.+.+.++|..+.+|+..........
T Consensus 10 e~~gek~~ede~~~s~n~--~y~qg~~~l~g~~~~~stt~p~nf~kgckWSPDGSciL~~sedn~l~~~nlP~dlys~~~ 87 (406)
T KOG2919|consen 10 EDGGEKDDEDEKKKSWNF--GYVQGPINLGGNVIAFSTTKPLNFLKGCKWSPDGSCILSLSEDNCLNCWNLPFDLYSKKA 87 (406)
T ss_pred ccCCccCcccchhccCcc--ceeecceeccCceEEeccCCchhhhccceeCCCCceEEeecccCeeeEEecChhhcccCC
Confidence 333556667777788873 222211111 11111 2 225899999999999999999988876555433221
Q ss_pred C-CCCcEEEEEEecCCCccccccCCc--------------ccCCCCcccCCCCCeeeee---ccccCCCCc---eeeEec
Q psy4579 79 D-EQNHLLIASVQLPNEDAQFDASNY--------------DTDKGGNVQLPNEDAQFDA---SNYDTDKGG---YGLSWN 137 (368)
Q Consensus 79 ~-~~~~~~i~~~~~~~~~~~~~~~~~--------------~~~~~g~i~i~~~~~~~~~---~~~~h~~~v---~~l~~s 137 (368)
+ .........+..+.....++..-| .++.+.-|++||.-..... .-+.|.+.+ .+|.|+
T Consensus 88 ~~~~~~~~~~~~r~~eg~tvydy~wYs~M~s~qP~t~l~a~ssr~~PIh~wdaftG~lraSy~~ydh~de~taAhsL~Fs 167 (406)
T KOG2919|consen 88 DGPLNFSKHLSYRYQEGETVYDYCWYSRMKSDQPSTNLFAVSSRDQPIHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFS 167 (406)
T ss_pred CCccccccceeEEeccCCEEEEEEeeeccccCCCccceeeeccccCceeeeeccccccccchhhhhhHHhhhhheeEEec
Confidence 1 111111222222222211111111 1246888999997543333 345576655 579999
Q ss_pred CCCCCeeEEEeCCCcEEEEeCCCCCCCCcccc-cceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCC
Q psy4579 138 PSLNGYLLSASDDHTICLWDINATPKENRVID-AKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPK 216 (368)
Q Consensus 138 p~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~-~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~ 216 (368)
|+| .+|.+| ....|++||+........... ..+.-.+..+.+. +++|+|-+...++.|+.-..+-||.-...
T Consensus 168 ~DG-eqlfaG-ykrcirvFdt~RpGr~c~vy~t~~~~k~gq~giis---c~a~sP~~~~~~a~gsY~q~~giy~~~~~-- 240 (406)
T KOG2919|consen 168 PDG-EQLFAG-YKRCIRVFDTSRPGRDCPVYTTVTKGKFGQKGIIS---CFAFSPMDSKTLAVGSYGQRVGIYNDDGR-- 240 (406)
T ss_pred CCC-CeEeec-ccceEEEeeccCCCCCCcchhhhhcccccccceee---eeeccCCCCcceeeecccceeeeEecCCC--
Confidence 999 676655 578999999954332211000 0011123355554 99999987779999999999999876665
Q ss_pred CCccccceeeeecccccEeEEEEeeecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCc-eeeee
Q psy4579 217 ENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGK-IEIEI 295 (368)
Q Consensus 217 ~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~-~~~~~ 295 (368)
.|+..+.+|...|+.+.|.+. .++++... .....+..||++..+ ++..+
T Consensus 241 -----~pl~llggh~gGvThL~~~ed---------Gn~lfsGa----------------Rk~dkIl~WDiR~~~~pv~~L 290 (406)
T KOG2919|consen 241 -----RPLQLLGGHGGGVTHLQWCED---------GNKLFSGA----------------RKDDKILCWDIRYSRDPVYAL 290 (406)
T ss_pred -----CceeeecccCCCeeeEEeccC---------cCeecccc----------------cCCCeEEEEeehhccchhhhh
Confidence 567888899999999999851 01111110 011123344443332 22333
Q ss_pred ecCccc-ceeEEE--EeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeecccCceeeecceeeee
Q psy4579 296 KINHEG-EVNRAR--YMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYNCYL 366 (368)
Q Consensus 296 ~~~h~~-~i~~~~--~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p~~~ 366 (368)
. .|.+ .--.|. ..|++ .+||+|+.||.|++||++.. ..+...+..|...|++++++|-|+
T Consensus 291 ~-rhv~~TNQRI~FDld~~~-~~LasG~tdG~V~vwdlk~~---------gn~~sv~~~~sd~vNgvslnP~mp 353 (406)
T KOG2919|consen 291 E-RHVGDTNQRILFDLDPKG-EILASGDTDGSVRVWDLKDL---------GNEVSVTGNYSDTVNGVSLNPIMP 353 (406)
T ss_pred h-hhccCccceEEEecCCCC-ceeeccCCCccEEEEecCCC---------CCcccccccccccccceecCcccc
Confidence 2 4544 223344 45788 79999999999999999854 344556778999999999999864
|
|
| >KOG0268|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.5e-20 Score=153.97 Aligned_cols=260 Identities=15% Similarity=0.190 Sum_probs=178.4
Q ss_pred HhhhhhhhhhhhhcCcchheeecccccccCceeeEecCCcccccCCCCccccccCcceeeeccccCCCCCcEEEEEEecC
Q psy4579 13 ERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQNHLLIASVQLP 92 (368)
Q Consensus 13 ~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 92 (368)
.+.-+.++|+|+....-+...+..| ..+|.-+.++. +.+.++++|+++..|.++.. ..+++. ....+..+.-.
T Consensus 84 SGs~DG~VkiWnlsqR~~~~~f~AH--~G~V~Gi~v~~--~~~~tvgdDKtvK~wk~~~~-p~~til--g~s~~~gIdh~ 156 (433)
T KOG0268|consen 84 SGSCDGEVKIWNLSQRECIRTFKAH--EGLVRGICVTQ--TSFFTVGDDKTVKQWKIDGP-PLHTIL--GKSVYLGIDHH 156 (433)
T ss_pred ccccCceEEEEehhhhhhhheeecc--cCceeeEEecc--cceEEecCCcceeeeeccCC-cceeee--ccccccccccc
Confidence 3446778999999999888888776 44676666665 66778899999977765442 111111 11112222211
Q ss_pred CCccccccCCcccCCCCcccCCCCCeeeeecccc-CCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccc
Q psy4579 93 NEDAQFDASNYDTDKGGNVQLPNEDAQFDASNYD-TDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAK 171 (368)
Q Consensus 93 ~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~-h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~ 171 (368)
..+..+. +.+..|.|||..-....+... -.+.|.+++|+|.-..+|++|+.|+.|.+||++... ++
T Consensus 157 ~~~~~Fa------TcGe~i~IWD~~R~~Pv~smswG~Dti~svkfNpvETsILas~~sDrsIvLyD~R~~~-------Pl 223 (433)
T KOG0268|consen 157 RKNSVFA------TCGEQIDIWDEQRDNPVSSMSWGADSISSVKFNPVETSILASCASDRSIVLYDLRQAS-------PL 223 (433)
T ss_pred ccccccc------ccCceeeecccccCCccceeecCCCceeEEecCCCcchheeeeccCCceEEEecccCC-------cc
Confidence 1111111 224578899986544444333 446799999999887899999999999999999875 33
Q ss_pred eeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee--ecccccCC
Q psy4579 172 TIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LILGTHTS 249 (368)
Q Consensus 172 ~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~ 249 (368)
+.+.-... . ..|+|+|+ .--|++|++|..+..+|++... .|+..+.+|...|.+++|+| .-+.+++-
T Consensus 224 ~KVi~~mR-T---N~IswnPe-afnF~~a~ED~nlY~~DmR~l~------~p~~v~~dhvsAV~dVdfsptG~Efvsgsy 292 (433)
T KOG0268|consen 224 KKVILTMR-T---NTICWNPE-AFNFVAANEDHNLYTYDMRNLS------RPLNVHKDHVSAVMDVDFSPTGQEFVSGSY 292 (433)
T ss_pred ceeeeecc-c---cceecCcc-ccceeeccccccceehhhhhhc------ccchhhcccceeEEEeccCCCcchhccccc
Confidence 33332222 2 28999996 8889999999999999999875 56788899999999999997 46777777
Q ss_pred CCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEE
Q psy4579 250 DEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFD 329 (368)
Q Consensus 250 d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd 329 (368)
|.+++++-..- +. .+-+.. ......|.|+.|+-|. .++++||.|++|++|.
T Consensus 293 DksIRIf~~~~------------------~~--------SRdiYh--tkRMq~V~~Vk~S~Ds-kyi~SGSdd~nvRlWk 343 (433)
T KOG0268|consen 293 DKSIRIFPVNH------------------GH--------SRDIYH--TKRMQHVFCVKYSMDS-KYIISGSDDGNVRLWK 343 (433)
T ss_pred cceEEEeecCC------------------Cc--------chhhhh--HhhhheeeEEEEeccc-cEEEecCCCcceeeee
Confidence 77777653321 00 000000 0123579999999999 5666999999999999
Q ss_pred CCC
Q psy4579 330 YTK 332 (368)
Q Consensus 330 ~~~ 332 (368)
-+.
T Consensus 344 a~A 346 (433)
T KOG0268|consen 344 AKA 346 (433)
T ss_pred cch
Confidence 764
|
|
| >KOG0301|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.8e-19 Score=161.13 Aligned_cols=227 Identities=16% Similarity=0.185 Sum_probs=166.3
Q ss_pred ceeeEecCCcccccCCCCccccccCcceee--eccccCC-CCCcEEEEEEecCC-CccccccCCcccCCCCcccCCCCCe
Q psy4579 43 SLTAQWLPDVTSVQLPNEDAQFDASNYDTD--KGTHTSD-EQNHLLIASVQLPN-EDAQFDASNYDTDKGGNVQLPNEDA 118 (368)
Q Consensus 43 ~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~g~i~i~~~~~ 118 (368)
+..|...+. ..++.+|.||++++|.-... ++++... ..+.+... +.+++ +..++... ..|++|.+|...+
T Consensus 17 Vr~v~~~~~-~~i~s~sRd~t~~vw~~~~~~~l~~~~~~~~~g~i~~~-i~y~e~~~~~l~~g----~~D~~i~v~~~~~ 90 (745)
T KOG0301|consen 17 VRAVAVTDG-VCIISGSRDGTVKVWAKKGKQYLETHAFEGPKGFIANS-ICYAESDKGRLVVG----GMDTTIIVFKLSQ 90 (745)
T ss_pred hheeEecCC-eEEeecCCCCceeeeeccCcccccceecccCcceeecc-ceeccccCcceEee----cccceEEEEecCC
Confidence 344555554 46788999999877754332 2333333 33333332 44433 22223322 3689999999876
Q ss_pred -eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeE
Q psy4579 119 -QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYL 197 (368)
Q Consensus 119 -~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l 197 (368)
.....+.+|+..|+|++...++ . +++||.|.++++|.... +...+.+|+..| |+++.-|+ + .+
T Consensus 91 ~~P~~~LkgH~snVC~ls~~~~~-~-~iSgSWD~TakvW~~~~---------l~~~l~gH~asV---WAv~~l~e-~-~~ 154 (745)
T KOG0301|consen 91 AEPLYTLKGHKSNVCSLSIGEDG-T-LISGSWDSTAKVWRIGE---------LVYSLQGHTASV---WAVASLPE-N-TY 154 (745)
T ss_pred CCchhhhhccccceeeeecCCcC-c-eEecccccceEEecchh---------hhcccCCcchhe---eeeeecCC-C-cE
Confidence 4466789999999999988886 4 99999999999998765 346699999999 69999996 3 89
Q ss_pred EEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeee-cccccCCCCccceEEEEeecCCcccccccccccC
Q psy4579 198 LSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRL-ILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDT 276 (368)
Q Consensus 198 ~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~ 276 (368)
+|||.|.+|++|.-.+ .+++|.+|++.|..+++-+. -+.+++.|+.++.|
T Consensus 155 vTgsaDKtIklWk~~~---------~l~tf~gHtD~VRgL~vl~~~~flScsNDg~Ir~w-------------------- 205 (745)
T KOG0301|consen 155 VTGSADKTIKLWKGGT---------LLKTFSGHTDCVRGLAVLDDSHFLSCSNDGSIRLW-------------------- 205 (745)
T ss_pred EeccCcceeeeccCCc---------hhhhhccchhheeeeEEecCCCeEeecCCceEEEE--------------------
Confidence 9999999999997533 47889999999999998653 55555555555554
Q ss_pred CCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECC
Q psy4579 277 DKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYT 331 (368)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~ 331 (368)
++ +|+.+..+. +|+.-|.++...+++ .+++|+++|++++||+..
T Consensus 206 --------~~-~ge~l~~~~-ghtn~vYsis~~~~~-~~Ivs~gEDrtlriW~~~ 249 (745)
T KOG0301|consen 206 --------DL-DGEVLLEMH-GHTNFVYSISMALSD-GLIVSTGEDRTLRIWKKD 249 (745)
T ss_pred --------ec-cCceeeeee-ccceEEEEEEecCCC-CeEEEecCCceEEEeecC
Confidence 33 366666666 999999999966666 578899999999999985
|
|
| >KOG0290|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.5e-18 Score=140.46 Aligned_cols=285 Identities=17% Similarity=0.263 Sum_probs=183.5
Q ss_pred eeecccccccCceeeEec--CC-cccccCCCCccc----cccCcceeeeccccCCC--CCcEEEEEEecCCCcc----cc
Q psy4579 32 DLVMTHALEWPSLTAQWL--PD-VTSVQLPNEDAQ----FDASNYDTDKGTHTSDE--QNHLLIASVQLPNEDA----QF 98 (368)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~--p~-~~~l~~~~~~~~----~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~----~~ 98 (368)
..++...-+||...+.|+ |+ ..+|+.||..-. +.+...+...+++.... ...-.+..+.|-+... .+
T Consensus 36 ~eiy~Y~ap~~lya~~Ws~~~~~~~rla~gS~~Ee~~Nkvqiv~ld~~s~e~~~~a~fd~~YP~tK~~wiPd~~g~~pdl 115 (364)
T KOG0290|consen 36 KEIYTYNAPWPLYAMNWSVRPDKKFRLAVGSFIEEYNNKVQIVQLDEDSGELVEDANFDHPYPVTKLMWIPDSKGVYPDL 115 (364)
T ss_pred ceEEEecCCCceeeeccccCCCcceeEEEeeeccccCCeeEEEEEccCCCceeccCCCCCCCCccceEecCCccccCcch
Confidence 346667789999999998 33 345676654322 22222222233333321 1112245555522221 12
Q ss_pred ccCCcccCCCCcccCCCCCe---eee-------eccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCccc
Q psy4579 99 DASNYDTDKGGNVQLPNEDA---QFD-------ASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVI 168 (368)
Q Consensus 99 ~~~~~~~~~~g~i~i~~~~~---~~~-------~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~ 168 (368)
.+ +.+-.+++|.... +.. .+...+.+++++..|+.-.++++.+.|-|-++.|||++++...
T Consensus 116 LA-----Ts~D~LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~~~~---- 186 (364)
T KOG0290|consen 116 LA-----TSSDFLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGVSG---- 186 (364)
T ss_pred hh-----cccCeEEEEeccCcCCceehhhhhccCcccccCCcccccccccCCcceeEeecccCeEEEEEEeecccc----
Confidence 22 2355788997652 111 1234467899999999888899999999999999999987321
Q ss_pred ccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeec--ccccEeEEEEee---ec
Q psy4579 169 DAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTG--HTAVVEDYSIHR---LI 243 (368)
Q Consensus 169 ~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~--~~~~v~~v~~~~---~~ 243 (368)
.....+-+|..+| +.|+|....-+.|||.|.||+|+++|+|...-. ...++. ...+...++|++ .+
T Consensus 187 ~vkTQLIAHDKEV---~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHS------TIIYE~p~~~~pLlRLswnkqDpny 257 (364)
T KOG0290|consen 187 TVKTQLIAHDKEV---YDIAFLKGSRDVFASVGADGSVRMFDLRSLEHS------TIIYEDPSPSTPLLRLSWNKQDPNY 257 (364)
T ss_pred ceeeEEEecCcce---eEEEeccCccceEEEecCCCcEEEEEecccccc------eEEecCCCCCCcceeeccCcCCchH
Confidence 1246788999999 699999876789999999999999999986421 112222 134566677763 34
Q ss_pred ccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCC
Q psy4579 244 LGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSS 323 (368)
Q Consensus 244 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg 323 (368)
+++...+. ..+.+..+.+| ......++ +|.+.|+.++|.|....-|+|++.|.
T Consensus 258 mATf~~dS-~~V~iLDiR~P-------------------------~tpva~L~-~H~a~VNgIaWaPhS~~hictaGDD~ 310 (364)
T KOG0290|consen 258 MATFAMDS-NKVVILDIRVP-------------------------CTPVARLR-NHQASVNGIAWAPHSSSHICTAGDDC 310 (364)
T ss_pred HhhhhcCC-ceEEEEEecCC-------------------------Ccceehhh-cCcccccceEecCCCCceeeecCCcc
Confidence 44433221 22333322211 12233444 89999999999999888999999999
Q ss_pred eEEEEECCCCCCCCCCCCCCCCceeeecccCceeeecceeeee
Q psy4579 324 DVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYNCYL 366 (368)
Q Consensus 324 ~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p~~~ 366 (368)
.+.+||+.+... .....|+..+. -.++|+.+.|+|..+
T Consensus 311 qaliWDl~q~~~----~~~~dPilay~-a~~EVNqi~Ws~~~~ 348 (364)
T KOG0290|consen 311 QALIWDLQQMPR----ENGEDPILAYT-AGGEVNQIQWSSSQP 348 (364)
T ss_pred eEEEEecccccc----cCCCCchhhhh-ccceeeeeeecccCC
Confidence 999999986543 12245555555 577899999997654
|
|
| >KOG2445|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=5.6e-19 Score=143.91 Aligned_cols=269 Identities=16% Similarity=0.125 Sum_probs=174.3
Q ss_pred ceeeEecCCcccccCCCCccccccCcceeeeccccCC---CCCcEEEEEEec-CCCccccccCCcccCCCCcccCCCCCe
Q psy4579 43 SLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSD---EQNHLLIASVQL-PNEDAQFDASNYDTDKGGNVQLPNEDA 118 (368)
Q Consensus 43 ~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~g~i~i~~~~~ 118 (368)
+.|+.|.+-|+++|+++.|+++.||+.+-..|+-..+ .-..-.|..+.| +++-+++.+.- +.|+++.||....
T Consensus 16 ihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~c---S~Drtv~iWEE~~ 92 (361)
T KOG2445|consen 16 IHDVSFDFYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATC---SYDRTVSIWEEQE 92 (361)
T ss_pred eeeeeecccCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEE---ecCCceeeeeecc
Confidence 6789999999999999999999888765555544333 222345666666 55555555443 4689999997632
Q ss_pred ----------eeeeccccCCCCceeeEecCCC-CCeeEEEeCCCcEEEEeCCCCCCCC------cccccceeeeccccce
Q psy4579 119 ----------QFDASNYDTDKGGYGLSWNPSL-NGYLLSASDDHTICLWDINATPKEN------RVIDAKTIFTGHTAVV 181 (368)
Q Consensus 119 ----------~~~~~~~~h~~~v~~l~~sp~~-~~~lasg~~dg~v~iwd~~~~~~~~------~~~~~~~~~~~h~~~v 181 (368)
....++......|++++|.|.. .-+||+++.||.+|||+.-....-. ++...+.....+..+.
T Consensus 93 ~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp~~~~~~~ 172 (361)
T KOG2445|consen 93 KSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQHEIQNVIDPPGKNKQPC 172 (361)
T ss_pred cccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhhhhhhhccCCcccccCcc
Confidence 1233456677899999999963 1589999999999999876532110 0000111122344444
Q ss_pred ecceeeEEeCCC--CCeEEEeeCC-----CcEEEEECCCCCCCCccccceeeeecccccEeEEEEee------ecccccC
Q psy4579 182 EVRYGLSWNPSL--NGYLLSASDD-----HTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR------LILGTHT 248 (368)
Q Consensus 182 ~~~~~i~~~p~~--~~~l~s~s~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~------~~~~~~~ 248 (368)
.|+.|+|.. ..+||.|+.+ +.++||....... -+..+..+.+|+.+|++++|.| .++++++
T Consensus 173 ---~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~r---Kw~kva~L~d~~dpI~di~wAPn~Gr~y~~lAvA~ 246 (361)
T KOG2445|consen 173 ---FCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGR---KWLKVAELPDHTDPIRDISWAPNIGRSYHLLAVAT 246 (361)
T ss_pred ---eEEeeccccccCceEEEEcccCCccccceEEEEecCCcc---eeeeehhcCCCCCcceeeeeccccCCceeeEEEee
Confidence 499999853 4578888776 5899998765431 1233456778999999999987 4677777
Q ss_pred CCCccceEEEEeecCCc-ccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEE
Q psy4579 249 SDEQNHLLIASVQLPNE-DAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLV 327 (368)
Q Consensus 249 ~d~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~i 327 (368)
.|+ ++++-.....+.- ...... . ....++ .-+.+..+ ..|.+.|..+.|+-.| .+|++.+.||.||+
T Consensus 247 kDg-v~I~~v~~~~s~i~~ee~~~-----~---~~~~~l-~v~~vs~~-~~H~~~VWrv~wNmtG-tiLsStGdDG~VRL 314 (361)
T KOG2445|consen 247 KDG-VRIFKVKVARSAIEEEEVLA-----P---DLMTDL-PVEKVSEL-DDHNGEVWRVRWNMTG-TILSSTGDDGCVRL 314 (361)
T ss_pred cCc-EEEEEEeeccchhhhhcccC-----C---CCcccc-ceEEeeec-cCCCCceEEEEEeeee-eEEeecCCCceeee
Confidence 777 7766544321100 000000 0 000000 00111222 3799999999999999 79999999999999
Q ss_pred EECCC
Q psy4579 328 FDYTK 332 (368)
Q Consensus 328 wd~~~ 332 (368)
|...-
T Consensus 315 Wkany 319 (361)
T KOG2445|consen 315 WKANY 319 (361)
T ss_pred hhhhh
Confidence 98753
|
|
| >KOG0294|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.5e-18 Score=141.83 Aligned_cols=249 Identities=14% Similarity=0.098 Sum_probs=167.2
Q ss_pred CcchheeecccccccCceeeEecCCcccccCCCCccccccCcceeeeccccCC-CCCcEEEEEEecCCCcc-ccccCCcc
Q psy4579 27 TPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSD-EQNHLLIASVQLPNEDA-QFDASNYD 104 (368)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~-~~~~~~~~ 104 (368)
+|.+...+.-.++..|+.+++. ++.++|+||.|-++ ..|+...-..... ....-.|..+.|...-. .-..+
T Consensus 30 ~~~l~~lF~~~aH~~sitavAV--s~~~~aSGssDetI--~IYDm~k~~qlg~ll~HagsitaL~F~~~~S~shLlS--- 102 (362)
T KOG0294|consen 30 KPTLKPLFAFSAHAGSITALAV--SGPYVASGSSDETI--HIYDMRKRKQLGILLSHAGSITALKFYPPLSKSHLLS--- 102 (362)
T ss_pred ceeeeccccccccccceeEEEe--cceeEeccCCCCcE--EEEeccchhhhcceeccccceEEEEecCCcchhheee---
Confidence 3444455555777888888887 68999999999988 5666654444333 23334577777743321 11111
Q ss_pred cCCCCcccCCCCCe-eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceec
Q psy4579 105 TDKGGNVQLPNEDA-QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEV 183 (368)
Q Consensus 105 ~~~~g~i~i~~~~~-~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~ 183 (368)
.+.||.|.+|+... ....++.+|.+.|+.++.+|.+ ++-++.+.|+.+++||+-.++.. ..+.-.+. .+
T Consensus 103 ~sdDG~i~iw~~~~W~~~~slK~H~~~Vt~lsiHPS~-KLALsVg~D~~lr~WNLV~Gr~a-------~v~~L~~~-at- 172 (362)
T KOG0294|consen 103 GSDDGHIIIWRVGSWELLKSLKAHKGQVTDLSIHPSG-KLALSVGGDQVLRTWNLVRGRVA-------FVLNLKNK-AT- 172 (362)
T ss_pred ecCCCcEEEEEcCCeEEeeeecccccccceeEecCCC-ceEEEEcCCceeeeehhhcCccc-------eeeccCCc-ce-
Confidence 24699999999876 6778899999999999999998 89999999999999999877531 22222222 22
Q ss_pred ceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEe-eecccccCCCCccceEEEEeec
Q psy4579 184 RYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIH-RLILGTHTSDEQNHLLIASVQL 262 (368)
Q Consensus 184 ~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~-~~~~~~~~~d~~~~~~~~~~~~ 262 (368)
.+.|+|. +.+++.++.+ .|-+|.+.+.. .+..+. ....+.++.|- ...+.++..++
T Consensus 173 --~v~w~~~-Gd~F~v~~~~-~i~i~q~d~A~-------v~~~i~-~~~r~l~~~~l~~~~L~vG~d~~----------- 229 (362)
T KOG0294|consen 173 --LVSWSPQ-GDHFVVSGRN-KIDIYQLDNAS-------VFREIE-NPKRILCATFLDGSELLVGGDNE----------- 229 (362)
T ss_pred --eeEEcCC-CCEEEEEecc-EEEEEecccHh-------Hhhhhh-ccccceeeeecCCceEEEecCCc-----------
Confidence 6899998 8888877765 58899887752 122221 22335555553 22233333222
Q ss_pred CCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEE--eCCCCcEEEEecCCCeEEEEECCCCC
Q psy4579 263 PNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARY--MPQNPCVIATKTPSSDVLVFDYTKHP 334 (368)
Q Consensus 263 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~--~p~~~~~lasgs~Dg~i~iwd~~~~~ 334 (368)
.+..+|..+..+...+. +|...|..+.+ .|++ .+|+|+|.||.|++||++...
T Consensus 230 -----------------~i~~~D~ds~~~~~~~~-AH~~RVK~i~~~~~~~~-~~lvTaSSDG~I~vWd~~~~~ 284 (362)
T KOG0294|consen 230 -----------------WISLKDTDSDTPLTEFL-AHENRVKDIASYTNPEH-EYLVTASSDGFIKVWDIDMET 284 (362)
T ss_pred -----------------eEEEeccCCCccceeee-cchhheeeeEEEecCCc-eEEEEeccCceEEEEEccccc
Confidence 23334444444445555 99999999984 3456 789999999999999998753
|
|
| >KOG1407|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=6.2e-19 Score=140.56 Aligned_cols=216 Identities=15% Similarity=0.152 Sum_probs=153.1
Q ss_pred EEEEEecCCCccccccCCcccCCCCcccCCCCCee---eeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCC
Q psy4579 85 LIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQ---FDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINAT 161 (368)
Q Consensus 85 ~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~---~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~ 161 (368)
.+.++.|...+.++..+. -|+++.+|+.+.. ......+|.+.|-.++|+|..+..|++++.|.+|++||++.+
T Consensus 22 ~v~Sv~wn~~g~~lasgs----~dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~ir~wd~r~~ 97 (313)
T KOG1407|consen 22 KVHSVAWNCDGTKLASGS----FDKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKTIRIWDIRSG 97 (313)
T ss_pred cceEEEEcccCceeeecc----cCCceEEEEecchhhhhhhcccCCCcchhhheeCCCCCcceEEecCCceEEEEEeccC
Confidence 467777755554444333 4789999998753 233467899999999999999899999999999999999987
Q ss_pred CCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee
Q psy4579 162 PKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR 241 (368)
Q Consensus 162 ~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~ 241 (368)
+ +........+.+ -+.|+|+ +++++.++.|..|...|.++.. .+...+ ....++.++|+.
T Consensus 98 k-------~~~~i~~~~eni----~i~wsp~-g~~~~~~~kdD~it~id~r~~~-------~~~~~~-~~~e~ne~~w~~ 157 (313)
T KOG1407|consen 98 K-------CTARIETKGENI----NITWSPD-GEYIAVGNKDDRITFIDARTYK-------IVNEEQ-FKFEVNEISWNN 157 (313)
T ss_pred c-------EEEEeeccCcce----EEEEcCC-CCEEEEecCcccEEEEEecccc-------eeehhc-ccceeeeeeecC
Confidence 5 445555445555 7899999 9999999999999999998863 222222 344567777762
Q ss_pred --ecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEe
Q psy4579 242 --LILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATK 319 (368)
Q Consensus 242 --~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasg 319 (368)
.++....+.+.+.+ ....+-+....+. +|.....|+.|+|+| .+||+|
T Consensus 158 ~nd~Fflt~GlG~v~I----------------------------LsypsLkpv~si~-AH~snCicI~f~p~G-ryfA~G 207 (313)
T KOG1407|consen 158 SNDLFFLTNGLGCVEI----------------------------LSYPSLKPVQSIK-AHPSNCICIEFDPDG-RYFATG 207 (313)
T ss_pred CCCEEEEecCCceEEE----------------------------Eeccccccccccc-cCCcceEEEEECCCC-ceEeec
Confidence 11111111111221 1111233344444 899999999999999 799999
Q ss_pred cCCCeEEEEECCCCCCCCCCCCCCCCceeeecccCceeeecceee
Q psy4579 320 TPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYNC 364 (368)
Q Consensus 320 s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p~ 364 (368)
|.|-.+.+||+.. ...+..+..|.=+|..|+||-+
T Consensus 208 sADAlvSLWD~~E----------LiC~R~isRldwpVRTlSFS~d 242 (313)
T KOG1407|consen 208 SADALVSLWDVDE----------LICERCISRLDWPVRTLSFSHD 242 (313)
T ss_pred cccceeeccChhH----------hhhheeeccccCceEEEEeccC
Confidence 9999999999964 3334466677778888888743
|
|
| >KOG1408|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.5e-19 Score=159.96 Aligned_cols=292 Identities=16% Similarity=0.157 Sum_probs=201.6
Q ss_pred ceeeEecCCcccccCCCCccccccCcceeeeccccCCCCCcEE----EEEEec-CCC----ccc--cccCCcccCCCCcc
Q psy4579 43 SLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQNHLL----IASVQL-PNE----DAQ--FDASNYDTDKGGNV 111 (368)
Q Consensus 43 ~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----i~~~~~-~~~----~~~--~~~~~~~~~~~g~i 111 (368)
...++|.|..+.|.+-+.|..+++|+.+-. .....-...++ |..+.. |-+ ... .-..-...+.||+|
T Consensus 327 ~IA~~Fdet~~klscVYndhSlYvWDvrD~--~kvgk~~s~lyHS~ciW~Ve~~p~nv~~~~~aclp~~cF~TCSsD~TI 404 (1080)
T KOG1408|consen 327 AIACQFDETTDKLSCVYNDHSLYVWDVRDV--NKVGKCSSMLYHSACIWDVENLPCNVHSPTAACLPRGCFTTCSSDGTI 404 (1080)
T ss_pred eeEEEecCCCceEEEEEcCceEEEEecccc--ccccceeeeeeccceeeeeccccccccCcccccCCccceeEecCCCcE
Confidence 456899999999999999998866654322 22222111222 333322 200 000 01112234679999
Q ss_pred cCCCCCe----eeee----------------------------------ccccCCCCceeeEecCCCCCeeEEEeCCCcE
Q psy4579 112 QLPNEDA----QFDA----------------------------------SNYDTDKGGYGLSWNPSLNGYLLSASDDHTI 153 (368)
Q Consensus 112 ~i~~~~~----~~~~----------------------------------~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v 153 (368)
++|+++. +... ...+-.-.+.|++.+|+| +.||+|..-|++
T Consensus 405 RlW~l~~ctnn~vyrRNils~~l~ki~y~d~~~q~~~d~~~~~fdka~~s~~d~r~G~R~~~vSp~g-qhLAsGDr~Gnl 483 (1080)
T KOG1408|consen 405 RLWDLAFCTNNQVYRRNILSANLSKIPYEDSTQQIMHDASAGIFDKALVSTCDSRFGFRALAVSPDG-QHLASGDRGGNL 483 (1080)
T ss_pred EEeecccccccceeecccchhhhhcCccccCchhhhhhccCCcccccchhhcCcccceEEEEECCCc-ceecccCccCce
Confidence 9999765 2100 011123568899999999 999999999999
Q ss_pred EEEeCCCCCCCCcccccceeeeccccceecceeeEEeCC--CCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeeccc
Q psy4579 154 CLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPS--LNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHT 231 (368)
Q Consensus 154 ~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~--~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 231 (368)
+||++.... .......|..+| +|+.|+-. ...+||+++.|..|.+||+.... .++.++.+|.
T Consensus 484 rVy~Lq~l~-------~~~~~eAHesEi---lcLeyS~p~~~~kLLASasrdRlIHV~Dv~rny------~l~qtld~HS 547 (1080)
T KOG1408|consen 484 RVYDLQELE-------YTCFMEAHESEI---LCLEYSFPVLTNKLLASASRDRLIHVYDVKRNY------DLVQTLDGHS 547 (1080)
T ss_pred EEEEehhhh-------hhhheeccccee---EEEeecCchhhhHhhhhccCCceEEEEeccccc------chhhhhcccc
Confidence 999998754 457788999999 59999742 14689999999999999997753 5678899999
Q ss_pred ccEeEEEEee----ecccccCCCCccceEE----------------------EEeecCCcccccccccccCCCCCccccc
Q psy4579 232 AVVEDYSIHR----LILGTHTSDEQNHLLI----------------------ASVQLPNEDAQFDASNYDTDKGDFGGFG 285 (368)
Q Consensus 232 ~~v~~v~~~~----~~~~~~~~d~~~~~~~----------------------~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 285 (368)
..|+++.|-. .-+.+++.|+.+++.. ..+..++.-+......- ...+++++
T Consensus 548 ssITsvKFa~~gln~~MiscGADksimFr~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~~k~v~t~cQ---Drnirif~ 624 (1080)
T KOG1408|consen 548 SSITSVKFACNGLNRKMISCGADKSIMFRVNQKASSGRLFPRHTQTLSKTTLYDMAVDPTSKLVVTVCQ---DRNIRIFD 624 (1080)
T ss_pred cceeEEEEeecCCceEEEeccCchhhheehhccccCceeccccccccccceEEEeeeCCCcceEEEEec---ccceEEEe
Confidence 9999999963 3445555565554432 22222222222222111 12477888
Q ss_pred CCCCceeeeeec--CcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeecccCceeeeccee
Q psy4579 286 SVSGKIEIEIKI--NHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYN 363 (368)
Q Consensus 286 ~~~~~~~~~~~~--~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p 363 (368)
..+|+....++. +|.+....+...|.| .++|+...|.++.++|+-. .+.+.+..||...|+++.|.+
T Consensus 625 i~sgKq~k~FKgs~~~eG~lIKv~lDPSg-iY~atScsdktl~~~Df~s----------gEcvA~m~GHsE~VTG~kF~n 693 (1080)
T KOG1408|consen 625 IESGKQVKSFKGSRDHEGDLIKVILDPSG-IYLATSCSDKTLCFVDFVS----------GECVAQMTGHSEAVTGVKFLN 693 (1080)
T ss_pred ccccceeeeecccccCCCceEEEEECCCc-cEEEEeecCCceEEEEecc----------chhhhhhcCcchheeeeeecc
Confidence 999988877764 467788999999999 7899999999999999976 344557889999999999988
Q ss_pred eeec
Q psy4579 364 CYLQ 367 (368)
Q Consensus 364 ~~~~ 367 (368)
.--|
T Consensus 694 DCkH 697 (1080)
T KOG1408|consen 694 DCKH 697 (1080)
T ss_pred cchh
Confidence 6543
|
|
| >PTZ00421 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.4e-18 Score=159.82 Aligned_cols=192 Identities=16% Similarity=0.154 Sum_probs=132.6
Q ss_pred CCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCC------CcccccceeeeccccceecceeeEEeCCCCCeEEEeeC
Q psy4579 129 KGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKE------NRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASD 202 (368)
Q Consensus 129 ~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~------~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~ 202 (368)
..|.....++++ ..+++++.+.....|+...+... .+.......+.+|.+.|. +++|+|.++++|++|+.
T Consensus 21 ~~i~~~~~~~d~-~~~~~~n~~~~a~~w~~~gg~~v~~~~~~G~~~~~~~~l~GH~~~V~---~v~fsP~d~~~LaSgS~ 96 (493)
T PTZ00421 21 LNVTPSTALWDC-SNTIACNDRFIAVPWQQLGSTAVLKHTDYGKLASNPPILLGQEGPII---DVAFNPFDPQKLFTASE 96 (493)
T ss_pred eccccccccCCC-CCcEeECCceEEEEEecCCceEEeeccccccCCCCCceEeCCCCCEE---EEEEcCCCCCEEEEEeC
Confidence 345555566665 56677777777777775443210 000011235789999995 99999943889999999
Q ss_pred CCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee---ecccccCCCCccceEEEEeecCCcccccccccccCCCC
Q psy4579 203 DHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR---LILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKG 279 (368)
Q Consensus 203 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~---~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 279 (368)
|++|++||+...........++..+.+|...|.+++|+| .++++++.|+.+++|
T Consensus 97 DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIW----------------------- 153 (493)
T PTZ00421 97 DGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVW----------------------- 153 (493)
T ss_pred CCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEE-----------------------
Confidence 999999999765322222245678889999999999986 245555555554444
Q ss_pred CcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeecccCce-ee
Q psy4579 280 DFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEG-LI 358 (368)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V-~~ 358 (368)
|+.+++....+. +|...|.+++|+|++ .+|++|+.|++|++||++. ...+..+.+|.+.+ ..
T Consensus 154 -----Dl~tg~~~~~l~-~h~~~V~sla~spdG-~lLatgs~Dg~IrIwD~rs----------g~~v~tl~~H~~~~~~~ 216 (493)
T PTZ00421 154 -----DVERGKAVEVIK-CHSDQITSLEWNLDG-SLLCTTSKDKKLNIIDPRD----------GTIVSSVEAHASAKSQR 216 (493)
T ss_pred -----ECCCCeEEEEEc-CCCCceEEEEEECCC-CEEEEecCCCEEEEEECCC----------CcEEEEEecCCCCcceE
Confidence 333454444444 799999999999999 6888999999999999985 33445566776543 35
Q ss_pred ecceee
Q psy4579 359 EGTYNC 364 (368)
Q Consensus 359 l~w~p~ 364 (368)
+.|.|.
T Consensus 217 ~~w~~~ 222 (493)
T PTZ00421 217 CLWAKR 222 (493)
T ss_pred EEEcCC
Confidence 566654
|
|
| >KOG0321|consensus | Back alignment and domain information |
|---|
Probab=99.81 E-value=2e-18 Score=153.26 Aligned_cols=329 Identities=13% Similarity=0.151 Sum_probs=190.9
Q ss_pred hhhhhhhhcCc-chheeecccccccCceeeEecCC--cc-cccCCCCccccccCcceeeecccc------CC-CCCcEEE
Q psy4579 18 EEYKIWKKNTP-FLYDLVMTHALEWPSLTAQWLPD--VT-SVQLPNEDAQFDASNYDTDKGTHT------SD-EQNHLLI 86 (368)
Q Consensus 18 ~~~~~w~~~~~-~~~~~~~~~~~~~~~~~~~~~p~--~~-~l~~~~~~~~~~~~~~~~~~~~~~------~~-~~~~~~i 86 (368)
++-..|+-+.| .-|. .+.++-|.+.+.|++. .+ .|+.+.++|.+.+.+-.-. .+. .. .-....|
T Consensus 29 ~~~~s~~gi~~~~s~~---~~~~p~pPf~~sFs~~~n~eHiLavadE~G~i~l~dt~~~--~fr~ee~~lk~~~aH~nAi 103 (720)
T KOG0321|consen 29 KALSSCRGIAPITSYA---NDGLPVPPFADSFSAAPNKEHILAVADEDGGIILFDTKSI--VFRLEERQLKKPLAHKNAI 103 (720)
T ss_pred hhhhhhcccccccccc---cCCCCCCCccccccCCCCccceEEEecCCCceeeecchhh--hcchhhhhhccccccccee
Confidence 33445555555 2332 2334445667777654 33 4778999999866543322 222 12 2234567
Q ss_pred EEEecCCCcccc-ccCCcccCCCCcccCCCCCee-eeec--cccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCC
Q psy4579 87 ASVQLPNEDAQF-DASNYDTDKGGNVQLPNEDAQ-FDAS--NYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATP 162 (368)
Q Consensus 87 ~~~~~~~~~~~~-~~~~~~~~~~g~i~i~~~~~~-~~~~--~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~ 162 (368)
.++.+-+...++ .++ +|.++++|+.++. .... .++|.+.|.+++|.|..+..|++|+.||.|.|||++-..
T Consensus 104 fDl~wapge~~lVsas-----GDsT~r~Wdvk~s~l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~ 178 (720)
T KOG0321|consen 104 FDLKWAPGESLLVSAS-----GDSTIRPWDVKTSRLVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNG 178 (720)
T ss_pred EeeccCCCceeEEEcc-----CCceeeeeeeccceeecceeecccccccchhhhccCCCcceeeccCCCcEEEEEEeccc
Confidence 777774444333 333 5999999998763 3333 789999999999999998999999999999999997543
Q ss_pred CCCc--------------------ccccceeeeccccceecceeeEEeCCCCCeEEEeeC-CCcEEEEECCCCCCCCccc
Q psy4579 163 KENR--------------------VIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASD-DHTICLWDINATPKENRVI 221 (368)
Q Consensus 163 ~~~~--------------------~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~-dg~i~iwd~~~~~~~~~~~ 221 (368)
.... ...-+...+.|...+.-...+-+..| ...||++|. |+.|++||++......+.
T Consensus 179 ~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s~ti~ssvTvv~fkD-e~tlaSaga~D~~iKVWDLRk~~~~~r~- 256 (720)
T KOG0321|consen 179 VDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAASNTIFSSVTVVLFKD-ESTLASAGAADSTIKVWDLRKNYTAYRQ- 256 (720)
T ss_pred hhhHHHHhhhhhccccCCCCCCchhhccccccccccCceeeeeEEEEEec-cceeeeccCCCcceEEEeeccccccccc-
Confidence 1000 00011222334444430002455556 888999988 999999999987544332
Q ss_pred cceeeee--cc---cccEeEEEEe---eecccccCCCCccceEEEEe---------------------ecCCcccccccc
Q psy4579 222 DAKTIFT--GH---TAVVEDYSIH---RLILGTHTSDEQNHLLIASV---------------------QLPNEDAQFDAS 272 (368)
Q Consensus 222 ~~~~~~~--~~---~~~v~~v~~~---~~~~~~~~~d~~~~~~~~~~---------------------~~~~~~~~~~~~ 272 (368)
.+..... .| ...+.++... +.+++++. |+.++.|-... .+.+++..+...
T Consensus 257 ep~~~~~~~t~skrs~G~~nL~lDssGt~L~AsCt-D~sIy~ynm~s~s~sP~~~~sg~~~~sf~vks~lSpd~~~l~Sg 335 (720)
T KOG0321|consen 257 EPRGSDKYPTHSKRSVGQVNLILDSSGTYLFASCT-DNSIYFYNMRSLSISPVAEFSGKLNSSFYVKSELSPDDCSLLSG 335 (720)
T ss_pred CCCcccCccCcccceeeeEEEEecCCCCeEEEEec-CCcEEEEeccccCcCchhhccCcccceeeeeeecCCCCceEecc
Confidence 1222211 12 1223344433 24555554 66666653211 111222222222
Q ss_pred cccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCC----CCCCCCCcee
Q psy4579 273 NYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPD----PNGECHPDLR 348 (368)
Q Consensus 273 ~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~----~~~~~~~~~~ 348 (368)
.+|. ...+|.+.+.+.....+.+|...|++++|.|..-.=++|++.|-++++|++........ ..........
T Consensus 336 Ssd~---~ayiw~vs~~e~~~~~l~Ght~eVt~V~w~pS~~t~v~TcSdD~~~kiW~l~~~l~e~~~adk~s~v~~~~~r 412 (720)
T KOG0321|consen 336 SSDE---QAYIWVVSSPEAPPALLLGHTREVTTVRWLPSATTPVATCSDDFRVKIWRLSNGLEEIYAADKDSIVYEYSRR 412 (720)
T ss_pred CCCc---ceeeeeecCccCChhhhhCcceEEEEEeeccccCCCceeeccCcceEEEeccCchhhccccccchhhhhhhhh
Confidence 2222 23445555555555566699999999999997655677889999999999954332111 0111112234
Q ss_pred eecccCceeeecce
Q psy4579 349 LRGHQKEGLIEGTY 362 (368)
Q Consensus 349 ~~gh~~~V~~l~w~ 362 (368)
+.+|.-.+..+-|+
T Consensus 413 fk~~~p~~~nv~ss 426 (720)
T KOG0321|consen 413 FKGHLPQVLNVNSS 426 (720)
T ss_pred hhcccccccccccc
Confidence 56676666666555
|
|
| >KOG1274|consensus | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.4e-18 Score=157.61 Aligned_cols=262 Identities=15% Similarity=0.160 Sum_probs=169.4
Q ss_pred ceeeEecCCcccccCCCCccccccCcceeeeccccCCCC-CcEEEEEEecCCCccccccCCcccCCCCcccCCCCCeeee
Q psy4579 43 SLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQ-NHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQFD 121 (368)
Q Consensus 43 ~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~ 121 (368)
-..+.|.|+|+.+.+++.||.+++|.-.... +...... .-..+.++..-.. .+... +.+++|+.+..+....
T Consensus 16 ~t~i~~d~~gefi~tcgsdg~ir~~~~~sd~-e~P~ti~~~g~~v~~ia~~s~--~f~~~----s~~~tv~~y~fps~~~ 88 (933)
T KOG1274|consen 16 LTLICYDPDGEFICTCGSDGDIRKWKTNSDE-EEPETIDISGELVSSIACYSN--HFLTG----SEQNTVLRYKFPSGEE 88 (933)
T ss_pred eEEEEEcCCCCEEEEecCCCceEEeecCCcc-cCCchhhccCceeEEEeeccc--ceEEe----eccceEEEeeCCCCCc
Confidence 4569999999999999999999766422211 1111111 1112333333222 22222 3578899887654322
Q ss_pred e-ccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEe
Q psy4579 122 A-SNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSA 200 (368)
Q Consensus 122 ~-~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~ 200 (368)
. .+....-++.+++++.+| .++|.||.|-.|++-++.... ....+++|.++|. ++.|+|. +++||+.
T Consensus 89 ~~iL~Rftlp~r~~~v~g~g-~~iaagsdD~~vK~~~~~D~s-------~~~~lrgh~apVl---~l~~~p~-~~fLAvs 156 (933)
T KOG1274|consen 89 DTILARFTLPIRDLAVSGSG-KMIAAGSDDTAVKLLNLDDSS-------QEKVLRGHDAPVL---QLSYDPK-GNFLAVS 156 (933)
T ss_pred cceeeeeeccceEEEEecCC-cEEEeecCceeEEEEeccccc-------hheeecccCCcee---eeeEcCC-CCEEEEE
Confidence 2 233456789999999999 999999999999999998765 4588999999995 9999999 9999999
Q ss_pred eCCCcEEEEECCCCCCCCccccceeeeecc-cccEeEEEEeee--cccccCCCCccceEEEEeecCCcccccccccccCC
Q psy4579 201 SDDHTICLWDINATPKENRVIDAKTIFTGH-TAVVEDYSIHRL--ILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTD 277 (368)
Q Consensus 201 s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~v~~v~~~~~--~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~ 277 (368)
+.||+|++||+.++.....+-......... ...+..++|+|. -++..+.+..+.
T Consensus 157 s~dG~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~Vk----------------------- 213 (933)
T KOG1274|consen 157 SCDGKVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNTVK----------------------- 213 (933)
T ss_pred ecCceEEEEEcccchhhhhcccCCccccccccceeeeeeecCCCCeEEeeccCCeEE-----------------------
Confidence 999999999998864322111111111111 345667788762 111112222122
Q ss_pred CCCcccccCCCCceeeeeec-CcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeecccCce
Q psy4579 278 KGDFGGFGSVSGKIEIEIKI-NHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEG 356 (368)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~-~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V 356 (368)
.+.....+....++. .|...++.++|+|+| .+||+++.||.|.|||..++. + ..-...|
T Consensus 214 -----vy~r~~we~~f~Lr~~~~ss~~~~~~wsPnG-~YiAAs~~~g~I~vWnv~t~~-------------~-~~~~~~V 273 (933)
T KOG1274|consen 214 -----VYSRKGWELQFKLRDKLSSSKFSDLQWSPNG-KYIAASTLDGQILVWNVDTHE-------------R-HEFKRAV 273 (933)
T ss_pred -----EEccCCceeheeecccccccceEEEEEcCCC-cEEeeeccCCcEEEEecccch-------------h-cccccee
Confidence 222222333333332 244459999999999 789999999999999997521 1 1224578
Q ss_pred eeecceeeee
Q psy4579 357 LIEGTYNCYL 366 (368)
Q Consensus 357 ~~l~w~p~~~ 366 (368)
.+++|.|+-+
T Consensus 274 c~~aw~p~~n 283 (933)
T KOG1274|consen 274 CCEAWKPNAN 283 (933)
T ss_pred EEEecCCCCC
Confidence 8899988753
|
|
| >KOG0299|consensus | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.5e-18 Score=147.13 Aligned_cols=238 Identities=14% Similarity=0.167 Sum_probs=174.1
Q ss_pred CceeeEecCCcccccCCCCccccccCcceeeeccccCC-CCCcEEEEEEecCCCccccccCCcccCCCCcccCCCCCe-e
Q psy4579 42 PSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSD-EQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDA-Q 119 (368)
Q Consensus 42 ~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~-~ 119 (368)
-+++++-+|||++|++|+.|..+.||.. ....|... ......|.++.|-.....+. ..+.|..|++|+.+. .
T Consensus 204 eil~~avS~Dgkylatgg~d~~v~Iw~~--~t~ehv~~~~ghr~~V~~L~fr~gt~~ly----s~s~Drsvkvw~~~~~s 277 (479)
T KOG0299|consen 204 EILTLAVSSDGKYLATGGRDRHVQIWDC--DTLEHVKVFKGHRGAVSSLAFRKGTSELY----SASADRSVKVWSIDQLS 277 (479)
T ss_pred eeEEEEEcCCCcEEEecCCCceEEEecC--cccchhhcccccccceeeeeeecCcccee----eeecCCceEEEehhHhH
Confidence 4889999999999999999999866654 55555555 22334577888855444333 334689999999986 5
Q ss_pred eeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEE
Q psy4579 120 FDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLS 199 (368)
Q Consensus 120 ~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s 199 (368)
.+.++++|++.|..|....-. +.+-+|+.|.++++|++... ....+.+|.+.+. |++|-. ..+|+|
T Consensus 278 ~vetlyGHqd~v~~IdaL~re-R~vtVGgrDrT~rlwKi~ee--------sqlifrg~~~sid---cv~~In--~~Hfvs 343 (479)
T KOG0299|consen 278 YVETLYGHQDGVLGIDALSRE-RCVTVGGRDRTVRLWKIPEE--------SQLIFRGGEGSID---CVAFIN--DEHFVS 343 (479)
T ss_pred HHHHHhCCccceeeechhccc-ceEEeccccceeEEEecccc--------ceeeeeCCCCCee---eEEEec--ccceee
Confidence 677899999999999998876 77777779999999999543 3478899998887 999975 678999
Q ss_pred eeCCCcEEEEECCCCCCCCccccceeeee------------cccccEeEEEEee--ecccccCCCCccceEEEEeecCCc
Q psy4579 200 ASDDHTICLWDINATPKENRVIDAKTIFT------------GHTAVVEDYSIHR--LILGTHTSDEQNHLLIASVQLPNE 265 (368)
Q Consensus 200 ~s~dg~i~iwd~~~~~~~~~~~~~~~~~~------------~~~~~v~~v~~~~--~~~~~~~~d~~~~~~~~~~~~~~~ 265 (368)
||.||.|.+|++-+.. |+.+.. .+...|++++.-+ .++++++.++.+++|...-.+.
T Consensus 344 GSdnG~IaLWs~~KKk-------plf~~~~AHgv~~~~~~~~~~~Witsla~i~~sdL~asGS~~G~vrLW~i~~g~r-- 414 (479)
T KOG0299|consen 344 GSDNGSIALWSLLKKK-------PLFTSRLAHGVIPELDPVNGNFWITSLAVIPGSDLLASGSWSGCVRLWKIEDGLR-- 414 (479)
T ss_pred ccCCceEEEeeecccC-------ceeEeeccccccCCccccccccceeeeEecccCceEEecCCCCceEEEEecCCcc--
Confidence 9999999999997763 222211 1223677777654 5778888888888876542110
Q ss_pred ccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCC
Q psy4579 266 DAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 266 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
.+ .++..+ .-.+-|++++|+++|..++|..+....+--|-..+
T Consensus 415 --~i--------------------~~l~~l--s~~GfVNsl~f~~sgk~ivagiGkEhRlGRW~~~k 457 (479)
T KOG0299|consen 415 --AI--------------------NLLYSL--SLVGFVNSLAFSNSGKRIVAGIGKEHRLGRWWCLK 457 (479)
T ss_pred --cc--------------------ceeeec--ccccEEEEEEEccCCCEEEEecccccccceeeEee
Confidence 00 111112 35678999999999977888888888777776654
|
|
| >KOG0300|consensus | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.2e-18 Score=142.70 Aligned_cols=187 Identities=20% Similarity=0.273 Sum_probs=144.3
Q ss_pred CCCCcccCCCCCe-eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEe------CCCCCC---------------
Q psy4579 106 DKGGNVQLPNEDA-QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWD------INATPK--------------- 163 (368)
Q Consensus 106 ~~~g~i~i~~~~~-~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd------~~~~~~--------------- 163 (368)
++|-+-+||.++. .+..+..+|.+.|+|++|++.+ .++++++.|++..||. +.....
T Consensus 167 SADhTA~iWs~Esg~CL~~Y~GH~GSVNsikfh~s~-~L~lTaSGD~taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe 245 (481)
T KOG0300|consen 167 SADHTARIWSLESGACLATYTGHTGSVNSIKFHNSG-LLLLTASGDETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDE 245 (481)
T ss_pred ccccceeEEeeccccceeeecccccceeeEEecccc-ceEEEccCCcchHHHHHhhcCcCCCCCCCCCCCchhhhhcccc
Confidence 4688899999874 6777888999999999999998 9999999999999998 222100
Q ss_pred C------------CcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeeccc
Q psy4579 164 E------------NRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHT 231 (368)
Q Consensus 164 ~------------~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 231 (368)
. ..+..|+..+.+|.+.|. +..|-.. ++.++++|+|.+..+||++++ .++..+.||.
T Consensus 246 ~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~---a~dWL~g-g~Q~vTaSWDRTAnlwDVEtg-------e~v~~LtGHd 314 (481)
T KOG0300|consen 246 HNRDTDSSEKSDGHTIRVPLMRLTGHRAVVS---ACDWLAG-GQQMVTASWDRTANLWDVETG-------EVVNILTGHD 314 (481)
T ss_pred cccccccccccCCceeeeeeeeeeccccceE---ehhhhcC-cceeeeeeccccceeeeeccC-------ceeccccCcc
Confidence 0 012236778999999995 9999887 899999999999999999998 5678899999
Q ss_pred ccEeEEEEee--ecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEe
Q psy4579 232 AVVEDYSIHR--LILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYM 309 (368)
Q Consensus 232 ~~v~~v~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~ 309 (368)
...+.++-+| .++.+.+.|.+- .+||.+..-.......+|...|+++.|.
T Consensus 315 ~ELtHcstHptQrLVvTsSrDtTF----------------------------RLWDFReaI~sV~VFQGHtdtVTS~vF~ 366 (481)
T KOG0300|consen 315 SELTHCSTHPTQRLVVTSSRDTTF----------------------------RLWDFREAIQSVAVFQGHTDTVTSVVFN 366 (481)
T ss_pred hhccccccCCcceEEEEeccCcee----------------------------EeccchhhcceeeeecccccceeEEEEe
Confidence 9888777765 344444444333 3344332222333445999999999999
Q ss_pred CCCCcEEEEecCCCeEEEEECCCCC
Q psy4579 310 PQNPCVIATKTPSSDVLVFDYTKHP 334 (368)
Q Consensus 310 p~~~~~lasgs~Dg~i~iwd~~~~~ 334 (368)
-+. ++ ++||.|.+|++||+++..
T Consensus 367 ~dd-~v-VSgSDDrTvKvWdLrNMR 389 (481)
T KOG0300|consen 367 TDD-RV-VSGSDDRTVKVWDLRNMR 389 (481)
T ss_pred cCC-ce-eecCCCceEEEeeecccc
Confidence 887 44 599999999999998754
|
|
| >KOG1539|consensus | Back alignment and domain information |
|---|
Probab=99.79 E-value=9.8e-19 Score=159.53 Aligned_cols=184 Identities=18% Similarity=0.254 Sum_probs=126.6
Q ss_pred hhhhhhhhhhhcCc----chheeecccccccCceeeEecCC--cccccCCCCccccccCcceeeeccccCCCCCcEEEEE
Q psy4579 15 VINEEYKIWKKNTP----FLYDLVMTHALEWPSLTAQWLPD--VTSVQLPNEDAQFDASNYDTDKGTHTSDEQNHLLIAS 88 (368)
Q Consensus 15 ~~~~~~~~w~~~~~----~~~~~~~~~~~~~~~~~~~~~p~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 88 (368)
.+..-..+|+...+ ++.-.+....... .+.-.+|. -+.++.|+.+|.+.+|+.+...-.++..+-. ..|.+
T Consensus 131 d~~~~l~vw~~s~~~~e~~l~~~~~~~~~~~--Ital~HP~TYLNKIvvGs~~G~lql~Nvrt~K~v~~f~~~~-s~IT~ 207 (910)
T KOG1539|consen 131 DISNILFVWKTSSIQEELYLQSTFLKVEGDF--ITALLHPSTYLNKIVVGSSQGRLQLWNVRTGKVVYTFQEFF-SRITA 207 (910)
T ss_pred EccCcEEEEEeccccccccccceeeeccCCc--eeeEecchhheeeEEEeecCCcEEEEEeccCcEEEEecccc-cceeE
Confidence 34555677888775 3322333332222 22333444 6778899999999777666554444443222 34555
Q ss_pred EecCCCccccccCCcccCCCCcccCCCCCeeeeeccccCC-CCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcc
Q psy4579 89 VQLPNEDAQFDASNYDTDKGGNVQLPNEDAQFDASNYDTD-KGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRV 167 (368)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~h~-~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~ 167 (368)
+.-. ....+.+.+ ..+|+|.++|+....+...+.|. ++|+.++|..||+..||+|+..|.+.+||++..+.
T Consensus 208 ieqs-PaLDVVaiG---~~~G~ViifNlK~dkil~sFk~d~g~VtslSFrtDG~p~las~~~~G~m~~wDLe~kkl---- 279 (910)
T KOG1539|consen 208 IEQS-PALDVVAIG---LENGTVIIFNLKFDKILMSFKQDWGRVTSLSFRTDGNPLLASGRSNGDMAFWDLEKKKL---- 279 (910)
T ss_pred eccC-CcceEEEEe---ccCceEEEEEcccCcEEEEEEccccceeEEEeccCCCeeEEeccCCceEEEEEcCCCee----
Confidence 4432 222334444 35999999999877666667775 99999999999988999999999999999998653
Q ss_pred ccccee-eeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCC
Q psy4579 168 IDAKTI-FTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPK 216 (368)
Q Consensus 168 ~~~~~~-~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~ 216 (368)
... ...|.+.+. .+.|.|. ...+++++.|.++++|=..++..
T Consensus 280 ---~~v~~nah~~sv~---~~~fl~~-epVl~ta~~DnSlk~~vfD~~dg 322 (910)
T KOG1539|consen 280 ---INVTRNAHYGSVT---GATFLPG-EPVLVTAGADNSLKVWVFDSGDG 322 (910)
T ss_pred ---eeeeeccccCCcc---cceecCC-CceEeeccCCCceeEEEeeCCCC
Confidence 333 347877786 8999998 89999999999999986554433
|
|
| >KOG0268|consensus | Back alignment and domain information |
|---|
Probab=99.79 E-value=6.6e-19 Score=146.44 Aligned_cols=209 Identities=16% Similarity=0.182 Sum_probs=146.2
Q ss_pred eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEE
Q psy4579 119 QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLL 198 (368)
Q Consensus 119 ~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~ 198 (368)
.++..+.+|.+.|.|++=+|.....+|+|+.||.|+|||+.... +...+.+|.+.|+ +|++.. ..++
T Consensus 57 PFv~~L~gHrdGV~~lakhp~~ls~~aSGs~DG~VkiWnlsqR~-------~~~~f~AH~G~V~---Gi~v~~---~~~~ 123 (433)
T KOG0268|consen 57 PFVGSLDGHRDGVSCLAKHPNKLSTVASGSCDGEVKIWNLSQRE-------CIRTFKAHEGLVR---GICVTQ---TSFF 123 (433)
T ss_pred cchhhccccccccchhhcCcchhhhhhccccCceEEEEehhhhh-------hhheeecccCcee---eEEecc---cceE
Confidence 46677889999999999999877789999999999999998764 6789999999997 898864 5688
Q ss_pred EeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee--ecccccCCCCccceEEE-----------------E
Q psy4579 199 SASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LILGTHTSDEQNHLLIA-----------------S 259 (368)
Q Consensus 199 s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~d~~~~~~~~-----------------~ 259 (368)
+++.|.+|+.|.+... +.+++.+. ..+..++-+. ..+++++. ++.+|.. +
T Consensus 124 tvgdDKtvK~wk~~~~--------p~~tilg~-s~~~gIdh~~~~~~FaTcGe--~i~IWD~~R~~Pv~smswG~Dti~s 192 (433)
T KOG0268|consen 124 TVGDDKTVKQWKIDGP--------PLHTILGK-SVYLGIDHHRKNSVFATCGE--QIDIWDEQRDNPVSSMSWGADSISS 192 (433)
T ss_pred EecCCcceeeeeccCC--------cceeeecc-ccccccccccccccccccCc--eeeecccccCCccceeecCCCceeE
Confidence 9999999999997763 23333321 1222333221 23333332 2333322 1
Q ss_pred eecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCC
Q psy4579 260 VQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDP 339 (368)
Q Consensus 260 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~ 339 (368)
+.+.+.+..+... -...+.+.++|++.+.+..... -...-+.++|+|.+ ..|++|++|..++.+|++..
T Consensus 193 vkfNpvETsILas--~~sDrsIvLyD~R~~~Pl~KVi--~~mRTN~IswnPea-fnF~~a~ED~nlY~~DmR~l------ 261 (433)
T KOG0268|consen 193 VKFNPVETSILAS--CASDRSIVLYDLRQASPLKKVI--LTMRTNTICWNPEA-FNFVAANEDHNLYTYDMRNL------ 261 (433)
T ss_pred EecCCCcchheee--eccCCceEEEecccCCccceee--eeccccceecCccc-cceeeccccccceehhhhhh------
Confidence 1122211111111 1233446677777776655443 34567889999966 78889999999999999963
Q ss_pred CCCCCCceeeecccCceeeecceeee
Q psy4579 340 NGECHPDLRLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 340 ~~~~~~~~~~~gh~~~V~~l~w~p~~ 365 (368)
..|+....+|.++|.+++|||..
T Consensus 262 ---~~p~~v~~dhvsAV~dVdfsptG 284 (433)
T KOG0268|consen 262 ---SRPLNVHKDHVSAVMDVDFSPTG 284 (433)
T ss_pred ---cccchhhcccceeEEEeccCCCc
Confidence 46777889999999999999964
|
|
| >KOG0307|consensus | Back alignment and domain information |
|---|
Probab=99.79 E-value=7.5e-19 Score=165.61 Aligned_cols=247 Identities=16% Similarity=0.210 Sum_probs=183.9
Q ss_pred CceeeEecCCccc----ccCCCCccccccCcceee--eccccC--C-CCCcEEEEEEecCCCccccccCCcccCCCCccc
Q psy4579 42 PSLTAQWLPDVTS----VQLPNEDAQFDASNYDTD--KGTHTS--D-EQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQ 112 (368)
Q Consensus 42 ~~~~~~~~p~~~~----l~~~~~~~~~~~~~~~~~--~~~~~~--~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~ 112 (368)
--..++|++.+.. +|.|.+||.|.+|+-... .+.... . ....-.|..+.|......+.+++ +++|.|.
T Consensus 66 rF~kL~W~~~g~~~~GlIaGG~edG~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASG---a~~geI~ 142 (1049)
T KOG0307|consen 66 RFNKLAWGSYGSHSHGLIAGGLEDGNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLASG---ADDGEIL 142 (1049)
T ss_pred cceeeeecccCCCccceeeccccCCceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCceeecc---CCCCcEE
Confidence 3456889999888 888999999987765542 111111 1 22234577788866666567776 6799999
Q ss_pred CCCCCeee---eeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEE
Q psy4579 113 LPNEDAQF---DASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSW 189 (368)
Q Consensus 113 i~~~~~~~---~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~ 189 (368)
|||++.-. ..-...-.+.|.+|+|+..-..+||+++.+|.+.|||++..+ ++..+..|.+.. .+..++|
T Consensus 143 iWDlnn~~tP~~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~-------pii~ls~~~~~~-~~S~l~W 214 (1049)
T KOG0307|consen 143 IWDLNKPETPFTPGSQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKK-------PIIKLSDTPGRM-HCSVLAW 214 (1049)
T ss_pred EeccCCcCCCCCCCCCCCcccceEeccchhhhHHhhccCCCCCceeccccCCC-------cccccccCCCcc-ceeeeee
Confidence 99987521 111233567899999998776899999999999999999764 455555555432 1148999
Q ss_pred eCCCCCeEEEeeCCC---cEEEEECCCCCCCCccccceeeeecccccEeEEEEee---ecccccCCCCccceEEEEeecC
Q psy4579 190 NPSLNGYLLSASDDH---TICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR---LILGTHTSDEQNHLLIASVQLP 263 (368)
Q Consensus 190 ~p~~~~~l~s~s~dg---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~---~~~~~~~~d~~~~~~~~~~~~~ 263 (368)
+|+....+++++.|. .|++||+|... .+.+.+.+|...|.+++|.+ .++.+++.
T Consensus 215 hP~~aTql~~As~dd~~PviqlWDlR~as------sP~k~~~~H~~GilslsWc~~D~~lllSsgk-------------- 274 (1049)
T KOG0307|consen 215 HPDHATQLLVASGDDSAPVIQLWDLRFAS------SPLKILEGHQRGILSLSWCPQDPRLLLSSGK-------------- 274 (1049)
T ss_pred CCCCceeeeeecCCCCCceeEeecccccC------CchhhhcccccceeeeccCCCCchhhhcccC--------------
Confidence 999888888888765 69999999875 56778899999999999975 33333332
Q ss_pred CcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCC
Q psy4579 264 NEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHP 334 (368)
Q Consensus 264 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~ 334 (368)
++.+.+|+..+++++..+. .....+..+.|+|..+.+|+.++.||.|-|+.+....
T Consensus 275 --------------D~~ii~wN~~tgEvl~~~p-~~~nW~fdv~w~pr~P~~~A~asfdgkI~I~sl~~~~ 330 (1049)
T KOG0307|consen 275 --------------DNRIICWNPNTGEVLGELP-AQGNWCFDVQWCPRNPSVMAAASFDGKISIYSLQGTD 330 (1049)
T ss_pred --------------CCCeeEecCCCceEeeecC-CCCcceeeeeecCCCcchhhhheeccceeeeeeecCC
Confidence 2345566677788887776 5678899999999999999999999999999997644
|
|
| >KOG4328|consensus | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.6e-18 Score=146.99 Aligned_cols=198 Identities=20% Similarity=0.256 Sum_probs=142.2
Q ss_pred ccCCCCceeeEecCCCC-CeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCC
Q psy4579 125 YDTDKGGYGLSWNPSLN-GYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDD 203 (368)
Q Consensus 125 ~~h~~~v~~l~~sp~~~-~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~d 203 (368)
.-|.+.|++++|+|..+ +++|+|..-|.|-+||+.+.... ..-...+..|..+|+ +|.|+|.+...+++.|.|
T Consensus 183 kv~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d---~d~v~~f~~hs~~Vs---~l~F~P~n~s~i~ssSyD 256 (498)
T KOG4328|consen 183 KVTDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKD---KDGVYLFTPHSGPVS---GLKFSPANTSQIYSSSYD 256 (498)
T ss_pred EecccceEEEEecccCcceEEEEccCCCcEEEEecCCCCCc---cCceEEeccCCcccc---ceEecCCChhheeeeccC
Confidence 44889999999999876 68999999999999999633221 123466778999997 999999988899999999
Q ss_pred CcEEEEECCCCCCCCccccceeeeecccccEeEEEEeeecccccCCCCccceEEEEeecCCcccccccccccCCCCCccc
Q psy4579 204 HTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGG 283 (368)
Q Consensus 204 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 283 (368)
|+|++=|+++... +.+..... ..+|+..+.++.+....... ..-|.+..
T Consensus 257 GtiR~~D~~~~i~-----e~v~s~~~-----------------------d~~~fs~~d~~~e~~~vl~~---~~~G~f~~ 305 (498)
T KOG4328|consen 257 GTIRLQDFEGNIS-----EEVLSLDT-----------------------DNIWFSSLDFSAESRSVLFG---DNVGNFNV 305 (498)
T ss_pred ceeeeeeecchhh-----HHHhhcCc-----------------------cceeeeeccccCCCccEEEe---ecccceEE
Confidence 9999999987621 11122211 12223333333222222111 11134566
Q ss_pred ccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeecccCceeeeccee
Q psy4579 284 FGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYN 363 (368)
Q Consensus 284 ~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p 363 (368)
+|.+++.-......-|...|+.++++|..+.+|||+|.|++.+|||+|+...+ ..|.+....|...|.+..|||
T Consensus 306 iD~R~~~s~~~~~~lh~kKI~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K------~sp~lst~~HrrsV~sAyFSP 379 (498)
T KOG4328|consen 306 IDLRTDGSEYENLRLHKKKITSVALNPVCPWFLATASLDQTAKIWDLRQLRGK------ASPFLSTLPHRRSVNSAYFSP 379 (498)
T ss_pred EEeecCCccchhhhhhhcccceeecCCCCchheeecccCcceeeeehhhhcCC------CCcceecccccceeeeeEEcC
Confidence 67666665554444788899999999999999999999999999999975432 224556678999999999999
Q ss_pred ee
Q psy4579 364 CY 365 (368)
Q Consensus 364 ~~ 365 (368)
.-
T Consensus 380 s~ 381 (498)
T KOG4328|consen 380 SG 381 (498)
T ss_pred CC
Confidence 64
|
|
| >TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.2e-17 Score=143.84 Aligned_cols=280 Identities=9% Similarity=-0.006 Sum_probs=160.1
Q ss_pred hhhhhhhhcCcchheeecccccccCceeeEecCCcccc-cCCCCccccccCcceeeeccccCCCCCcEEEEEEecCCCcc
Q psy4579 18 EEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSV-QLPNEDAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNEDA 96 (368)
Q Consensus 18 ~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 96 (368)
...++|+..+......+... -.+.+++|+|+++.+ ++++.++.+.+| +...+......+.......+.+.+.+.
T Consensus 11 ~~v~~~d~~t~~~~~~~~~~---~~~~~l~~~~dg~~l~~~~~~~~~v~~~--d~~~~~~~~~~~~~~~~~~~~~~~~g~ 85 (300)
T TIGR03866 11 NTISVIDTATLEVTRTFPVG---QRPRGITLSKDGKLLYVCASDSDTIQVI--DLATGEVIGTLPSGPDPELFALHPNGK 85 (300)
T ss_pred CEEEEEECCCCceEEEEECC---CCCCceEECCCCCEEEEEECCCCeEEEE--ECCCCcEEEeccCCCCccEEEECCCCC
Confidence 34566776665544444322 224679999999876 566777877554 444333322111111123344544443
Q ss_pred ccccCCcccCCCCcccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCCC-cEEEEeCCCCCCCCcccccceeee
Q psy4579 97 QFDASNYDTDKGGNVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDH-TICLWDINATPKENRVIDAKTIFT 175 (368)
Q Consensus 97 ~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg-~v~iwd~~~~~~~~~~~~~~~~~~ 175 (368)
.+.+.. ..++.+.+|+...........+...+.+++|+|++ .++++++.++ .+.+||..+.. ......
T Consensus 86 ~l~~~~---~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~dg-~~l~~~~~~~~~~~~~d~~~~~-------~~~~~~ 154 (300)
T TIGR03866 86 ILYIAN---EDDNLVTVIDIETRKVLAEIPVGVEPEGMAVSPDG-KIVVNTSETTNMAHFIDTKTYE-------IVDNVL 154 (300)
T ss_pred EEEEEc---CCCCeEEEEECCCCeEEeEeeCCCCcceEEECCCC-CEEEEEecCCCeEEEEeCCCCe-------EEEEEE
Confidence 333332 24789999998764444444444567889999999 8888888765 46778987653 122222
Q ss_pred ccccceecceeeEEeCCCCCeE-EEeeCCCcEEEEECCCCCCCCccccceeeeeccc-----cc--EeEEEEeeeccccc
Q psy4579 176 GHTAVVEVRYGLSWNPSLNGYL-LSASDDHTICLWDINATPKENRVIDAKTIFTGHT-----AV--VEDYSIHRLILGTH 247 (368)
Q Consensus 176 ~h~~~v~~~~~i~~~p~~~~~l-~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~-----~~--v~~v~~~~~~~~~~ 247 (368)
... ... +++|+|+ +.+| +++..++.|++||++++.. ...+..+. .. ...++|++
T Consensus 155 ~~~-~~~---~~~~s~d-g~~l~~~~~~~~~v~i~d~~~~~~-------~~~~~~~~~~~~~~~~~~~~i~~s~------ 216 (300)
T TIGR03866 155 VDQ-RPR---FAEFTAD-GKELWVSSEIGGTVSVIDVATRKV-------IKKITFEIPGVHPEAVQPVGIKLTK------ 216 (300)
T ss_pred cCC-Ccc---EEEECCC-CCEEEEEcCCCCEEEEEEcCccee-------eeeeeecccccccccCCccceEECC------
Confidence 222 233 8899998 7766 5556799999999987632 22221110 11 11233332
Q ss_pred CCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEE
Q psy4579 248 TSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLV 327 (368)
Q Consensus 248 ~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~i 327 (368)
++ ..+++.. . ..+.+.+|+..+++...... +...+.+++|+|++..++++++.+|.|++
T Consensus 217 --dg-~~~~~~~--------------~--~~~~i~v~d~~~~~~~~~~~--~~~~~~~~~~~~~g~~l~~~~~~~~~i~v 275 (300)
T TIGR03866 217 --DG-KTAFVAL--------------G--PANRVAVVDAKTYEVLDYLL--VGQRVWQLAFTPDEKYLLTTNGVSNDVSV 275 (300)
T ss_pred --CC-CEEEEEc--------------C--CCCeEEEEECCCCcEEEEEE--eCCCcceEEECCCCCEEEEEcCCCCeEEE
Confidence 00 0111110 0 11224445555555543332 44578999999999655545567999999
Q ss_pred EECCCCCCCCCCCCCCCCceeeecccCceeeeccee
Q psy4579 328 FDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYN 363 (368)
Q Consensus 328 wd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p 363 (368)
||++. ...+..+.. ....++++++|
T Consensus 276 ~d~~~----------~~~~~~~~~-~~~~~~~~~~~ 300 (300)
T TIGR03866 276 IDVAA----------LKVIKSIKV-GRLPWGVVVRP 300 (300)
T ss_pred EECCC----------CcEEEEEEc-ccccceeEeCC
Confidence 99985 333444543 35558888876
|
Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol. |
| >KOG2048|consensus | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.5e-17 Score=148.62 Aligned_cols=280 Identities=13% Similarity=0.132 Sum_probs=188.1
Q ss_pred eeecccccccCceeeEecCCcccccCCCCccccccCcceeeeccc-cCCCCCcEEEEEEecCCCccccccCCcccCCCCc
Q psy4579 32 DLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTH-TSDEQNHLLIASVQLPNEDAQFDASNYDTDKGGN 110 (368)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~ 110 (368)
+.-+-.-.+-++.+++|+.+.+.||.+-.+|.+++|+....--.. ....+....|..+.|.+....+... .+|.
T Consensus 17 rcrf~d~~Ps~I~slA~s~kS~~lAvsRt~g~IEiwN~~~~w~~~~vi~g~~drsIE~L~W~e~~RLFS~g-----~sg~ 91 (691)
T KOG2048|consen 17 RCRFVDYKPSEIVSLAYSHKSNQLAVSRTDGNIEIWNLSNNWFLEPVIHGPEDRSIESLAWAEGGRLFSSG-----LSGS 91 (691)
T ss_pred EEEEEeeeccceEEEEEeccCCceeeeccCCcEEEEccCCCceeeEEEecCCCCceeeEEEccCCeEEeec-----CCce
Confidence 333334567789999999999999999999999888755431111 1112334567888887554444433 4899
Q ss_pred ccCCCCCe-eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEE
Q psy4579 111 VQLPNEDA-QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSW 189 (368)
Q Consensus 111 i~i~~~~~-~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~ 189 (368)
|.-||+.. +.........++|++++.+|.+ ..++.|+.||.+..+++..+.. .....+...++.+ ++++|
T Consensus 92 i~EwDl~~lk~~~~~d~~gg~IWsiai~p~~-~~l~IgcddGvl~~~s~~p~~I-----~~~r~l~rq~sRv---Lslsw 162 (691)
T KOG2048|consen 92 ITEWDLHTLKQKYNIDSNGGAIWSIAINPEN-TILAIGCDDGVLYDFSIGPDKI-----TYKRSLMRQKSRV---LSLSW 162 (691)
T ss_pred EEEEecccCceeEEecCCCcceeEEEeCCcc-ceEEeecCCceEEEEecCCceE-----EEEeecccccceE---EEEEe
Confidence 99999864 4445555677899999999998 9999999999777777765532 1234555566777 69999
Q ss_pred eCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeec----ccccEeEEEEe-eecccccCCCCccceEEEEeecCC
Q psy4579 190 NPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTG----HTAVVEDYSIH-RLILGTHTSDEQNHLLIASVQLPN 264 (368)
Q Consensus 190 ~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~----~~~~v~~v~~~-~~~~~~~~~d~~~~~~~~~~~~~~ 264 (368)
+|+ +..+++|+.||.|++||...+...... ...+.+ ...-|+++.|- +..++++++.
T Consensus 163 ~~~-~~~i~~Gs~Dg~Iriwd~~~~~t~~~~---~~~~d~l~k~~~~iVWSv~~Lrd~tI~sgDS~-------------- 224 (691)
T KOG2048|consen 163 NPT-GTKIAGGSIDGVIRIWDVKSGQTLHII---TMQLDRLSKREPTIVWSVLFLRDSTIASGDSA-------------- 224 (691)
T ss_pred cCC-ccEEEecccCceEEEEEcCCCceEEEe---eecccccccCCceEEEEEEEeecCcEEEecCC--------------
Confidence 999 888999999999999999887532100 001111 11223344332 2333333333
Q ss_pred cccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCC
Q psy4579 265 EDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECH 344 (368)
Q Consensus 265 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~ 344 (368)
|.+..||...+.+..... .|.+.|.+++..+++++ +.+++.|+.|..+........ ..
T Consensus 225 --------------G~V~FWd~~~gTLiqS~~-~h~adVl~Lav~~~~d~-vfsaGvd~~ii~~~~~~~~~~------wv 282 (691)
T KOG2048|consen 225 --------------GTVTFWDSIFGTLIQSHS-CHDADVLALAVADNEDR-VFSAGVDPKIIQYSLTTNKSE------WV 282 (691)
T ss_pred --------------ceEEEEcccCcchhhhhh-hhhcceeEEEEcCCCCe-EEEccCCCceEEEEecCCccc------ee
Confidence 444455555666665555 79999999999999854 558899999999888653221 11
Q ss_pred CceeeecccCceeeecceeee
Q psy4579 345 PDLRLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 345 ~~~~~~gh~~~V~~l~w~p~~ 365 (368)
......+|...|.+++-.++.
T Consensus 283 ~~~~r~~h~hdvrs~av~~~~ 303 (691)
T KOG2048|consen 283 INSRRDLHAHDVRSMAVIENA 303 (691)
T ss_pred eeccccCCcccceeeeeecce
Confidence 222335678888888877653
|
|
| >KOG0288|consensus | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.3e-17 Score=139.54 Aligned_cols=262 Identities=13% Similarity=0.143 Sum_probs=180.3
Q ss_pred HHHhhhhhhhhhhhhcCcchheeecccc-cccCceeeEecCCcccccCCCCccccccCcceeeeccccCCCCCcEEEEEE
Q psy4579 11 VEERVINEEYKIWKKNTPFLYDLVMTHA-LEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQNHLLIASV 89 (368)
Q Consensus 11 ~~~~~~~~~~~~w~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 89 (368)
....-.++-.|+|+++-.. ++.+.+-. --.++.+++|.+++.+++.++.|+..++|+.+-...-++-.. ....+.++
T Consensus 190 latgg~Dr~Ik~W~v~~~k-~~~~~tLaGs~g~it~~d~d~~~~~~iAas~d~~~r~Wnvd~~r~~~TLsG-HtdkVt~a 267 (459)
T KOG0288|consen 190 LATGGSDRIIKLWNVLGEK-SELISTLAGSLGNITSIDFDSDNKHVIAASNDKNLRLWNVDSLRLRHTLSG-HTDKVTAA 267 (459)
T ss_pred hhhcchhhhhhhhhcccch-hhhhhhhhccCCCcceeeecCCCceEEeecCCCceeeeeccchhhhhhhcc-cccceeee
Confidence 3344467788999998776 33332211 124699999999999999999999997787655443333332 22346666
Q ss_pred ecCCCccccccCCcccCCCCcccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccc
Q psy4579 90 QLPNEDAQFDASNYDTDKGGNVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVID 169 (368)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~ 169 (368)
.+-..... ..+.+.|-+|++|++....+....--...+.+|..++ ..+++|..|+.||+||+++..
T Consensus 268 k~~~~~~~----vVsgs~DRtiK~WDl~k~~C~kt~l~~S~cnDI~~~~---~~~~SgH~DkkvRfwD~Rs~~------- 333 (459)
T KOG0288|consen 268 KFKLSHSR----VVSGSADRTIKLWDLQKAYCSKTVLPGSQCNDIVCSI---SDVISGHFDKKVRFWDIRSAD------- 333 (459)
T ss_pred hhhccccc----eeeccccchhhhhhhhhhheeccccccccccceEecc---eeeeecccccceEEEeccCCc-------
Confidence 66433322 2223568999999998765555444555667777662 679999999999999998875
Q ss_pred cceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeec----ccccEeEEEEee--ec
Q psy4579 170 AKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTG----HTAVVEDYSIHR--LI 243 (368)
Q Consensus 170 ~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~----~~~~v~~v~~~~--~~ 243 (368)
+......+. .|+ ++..+++ +..+.+++.|.++.+.|+++... ...+.. .....+.+.|+| .+
T Consensus 334 ~~~sv~~gg-~vt---Sl~ls~~-g~~lLsssRDdtl~viDlRt~eI-------~~~~sA~g~k~asDwtrvvfSpd~~Y 401 (459)
T KOG0288|consen 334 KTRSVPLGG-RVT---SLDLSMD-GLELLSSSRDDTLKVIDLRTKEI-------RQTFSAEGFKCASDWTRVVFSPDGSY 401 (459)
T ss_pred eeeEeecCc-cee---eEeeccC-CeEEeeecCCCceeeeecccccE-------EEEeeccccccccccceeEECCCCce
Confidence 445566555 676 9999998 88888999999999999998632 222221 112356666765 45
Q ss_pred ccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCccc-ceeEEEEeCCCCcEEEEecCC
Q psy4579 244 LGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEG-EVNRARYMPQNPCVIATKTPS 322 (368)
Q Consensus 244 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~-~i~~~~~~p~~~~~lasgs~D 322 (368)
+++|+.|+.+++| +..++++.......+.. .|++++|+|.|.. |++++.+
T Consensus 402 vaAGS~dgsv~iW----------------------------~v~tgKlE~~l~~s~s~~aI~s~~W~~sG~~-Llsadk~ 452 (459)
T KOG0288|consen 402 VAAGSADGSVYIW----------------------------SVFTGKLEKVLSLSTSNAAITSLSWNPSGSG-LLSADKQ 452 (459)
T ss_pred eeeccCCCcEEEE----------------------------EccCceEEEEeccCCCCcceEEEEEcCCCch-hhcccCC
Confidence 6666666555554 44456666666555555 8999999999954 5588999
Q ss_pred CeEEEEE
Q psy4579 323 SDVLVFD 329 (368)
Q Consensus 323 g~i~iwd 329 (368)
+.+.+|.
T Consensus 453 ~~v~lW~ 459 (459)
T KOG0288|consen 453 KAVTLWT 459 (459)
T ss_pred cceEecC
Confidence 9999993
|
|
| >KOG2106|consensus | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.6e-17 Score=141.65 Aligned_cols=262 Identities=16% Similarity=0.205 Sum_probs=176.7
Q ss_pred CceeeEecCCcccccCCCCccccccCcceeeeccccC---CCCCcEEEEEEecCCCccccccCCcccCCCCcccCCCCCe
Q psy4579 42 PSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTS---DEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDA 118 (368)
Q Consensus 42 ~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~ 118 (368)
.++-+.|+|...-|++....+.+..|.++...-.... +.++...+.++.|-+++..+.+ +.+|.|.||+..+
T Consensus 202 ~v~~a~FHPtd~nliit~Gk~H~~Fw~~~~~~l~k~~~~fek~ekk~Vl~v~F~engdviTg-----DS~G~i~Iw~~~~ 276 (626)
T KOG2106|consen 202 VVFLATFHPTDPNLIITCGKGHLYFWTLRGGSLVKRQGIFEKREKKFVLCVTFLENGDVITG-----DSGGNILIWSKGT 276 (626)
T ss_pred eEEEEEeccCCCcEEEEeCCceEEEEEccCCceEEEeeccccccceEEEEEEEcCCCCEEee-----cCCceEEEEeCCC
Confidence 3567899999998888778888877754433211111 2334466888988766544432 4589999999976
Q ss_pred -eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCccc-----------------------------
Q psy4579 119 -QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVI----------------------------- 168 (368)
Q Consensus 119 -~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~----------------------------- 168 (368)
++..+...|++.|.+|+.-.+| .|++|+.|..|..||-. .+...++.
T Consensus 277 ~~~~k~~~aH~ggv~~L~~lr~G--tllSGgKDRki~~Wd~~-y~k~r~~elPe~~G~iRtv~e~~~di~vGTtrN~iL~ 353 (626)
T KOG2106|consen 277 NRISKQVHAHDGGVFSLCMLRDG--TLLSGGKDRKIILWDDN-YRKLRETELPEQFGPIRTVAEGKGDILVGTTRNFILQ 353 (626)
T ss_pred ceEEeEeeecCCceEEEEEecCc--cEeecCccceEEecccc-ccccccccCchhcCCeeEEecCCCcEEEeeccceEEE
Confidence 4555556899999999999987 56679999999999933 21111000
Q ss_pred -----ccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeeec
Q psy4579 169 -----DAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLI 243 (368)
Q Consensus 169 -----~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~ 243 (368)
.......+|.... +.++-+|+ .+.++|++.|+.++||+ ... +.-+. ....++.|++|+|.-
T Consensus 354 Gt~~~~f~~~v~gh~del---wgla~hps-~~q~~T~gqdk~v~lW~-~~k--------~~wt~-~~~d~~~~~~fhpsg 419 (626)
T KOG2106|consen 354 GTLENGFTLTVQGHGDEL---WGLATHPS-KNQLLTCGQDKHVRLWN-DHK--------LEWTK-IIEDPAECADFHPSG 419 (626)
T ss_pred eeecCCceEEEEecccce---eeEEcCCC-hhheeeccCcceEEEcc-CCc--------eeEEE-EecCceeEeeccCcc
Confidence 0122445688777 69999999 89999999999999999 221 11111 145678899998721
Q ss_pred -ccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCC
Q psy4579 244 -LGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPS 322 (368)
Q Consensus 244 -~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~D 322 (368)
++.+ ...|.+...+..+. ...++... ..++++++|+|+| .+||.||.|
T Consensus 420 ~va~G----------------------------t~~G~w~V~d~e~~-~lv~~~~d-~~~ls~v~ysp~G-~~lAvgs~d 468 (626)
T KOG2106|consen 420 VVAVG----------------------------TATGRWFVLDTETQ-DLVTIHTD-NEQLSVVRYSPDG-AFLAVGSHD 468 (626)
T ss_pred eEEEe----------------------------eccceEEEEecccc-eeEEEEec-CCceEEEEEcCCC-CEEEEecCC
Confidence 1111 12233444444443 33344434 7899999999999 799999999
Q ss_pred CeEEEEECCCCCCCCCCCCCCCCceee-ecccCceeeecceeee
Q psy4579 323 SDVLVFDYTKHPSKPDPNGECHPDLRL-RGHQKEGLIEGTYNCY 365 (368)
Q Consensus 323 g~i~iwd~~~~~~~~~~~~~~~~~~~~-~gh~~~V~~l~w~p~~ 365 (368)
+.|+||-+...+ ....+. +-|..+|+.|+||++.
T Consensus 469 ~~iyiy~Vs~~g---------~~y~r~~k~~gs~ithLDwS~Ds 503 (626)
T KOG2106|consen 469 NHIYIYRVSANG---------RKYSRVGKCSGSPITHLDWSSDS 503 (626)
T ss_pred CeEEEEEECCCC---------cEEEEeeeecCceeEEeeecCCC
Confidence 999999998543 222222 1233899999999764
|
|
| >KOG1007|consensus | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.4e-17 Score=134.67 Aligned_cols=221 Identities=19% Similarity=0.252 Sum_probs=152.0
Q ss_pred EEEEEecCCCccccccCCcccCCCCcccCCCCCeeee--e-----ccccCCCCceeeEecC--CCCCeeEEEeCCCcEEE
Q psy4579 85 LIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQFD--A-----SNYDTDKGGYGLSWNP--SLNGYLLSASDDHTICL 155 (368)
Q Consensus 85 ~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~--~-----~~~~h~~~v~~l~~sp--~~~~~lasg~~dg~v~i 155 (368)
.|.++.|.++..++.+.. +..|.+|+++.... . ...+|....++-+|+| ++ +.+++. .|++++.
T Consensus 125 ~i~cvew~Pns~klasm~-----dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdg-nqv~tt-~d~tl~~ 197 (370)
T KOG1007|consen 125 KINCVEWEPNSDKLASMD-----DNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDG-NQVATT-SDSTLQF 197 (370)
T ss_pred ceeeEEEcCCCCeeEEec-----cCceEEEEcccCcchheeecccccccccceecccccCCCCcc-ceEEEe-CCCcEEE
Confidence 578888855554444443 78899999764221 1 1233677888999999 44 566554 5899999
Q ss_pred EeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEe
Q psy4579 156 WDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVE 235 (368)
Q Consensus 156 wd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~ 235 (368)
||+++..+ ....-.+|...|+ .+.|+|....+|+||+.||.|+|||.|..+ .|+..+.+|...|+
T Consensus 198 ~D~RT~~~------~~sI~dAHgq~vr---dlDfNpnkq~~lvt~gDdgyvriWD~R~tk------~pv~el~~HsHWvW 262 (370)
T KOG1007|consen 198 WDLRTMKK------NNSIEDAHGQRVR---DLDFNPNKQHILVTCGDDGYVRIWDTRKTK------FPVQELPGHSHWVW 262 (370)
T ss_pred EEccchhh------hcchhhhhcceee---eccCCCCceEEEEEcCCCccEEEEeccCCC------ccccccCCCceEEE
Confidence 99998653 2344557877887 999999977889999999999999999865 56788999999999
Q ss_pred EEEEee---ecccccCCCCccceEEEEeecCCcccccccccccCCCC-----CcccccCCCCceeeeeecCcccceeEEE
Q psy4579 236 DYSIHR---LILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKG-----DFGGFGSVSGKIEIEIKINHEGEVNRAR 307 (368)
Q Consensus 236 ~v~~~~---~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-----~~~~~~~~~~~~~~~~~~~h~~~i~~~~ 307 (368)
+|.|+| .++.+++.|..+.++.+....+ +.++... -|.... .-..-.+..| .+.++ ..|.+.|.+++
T Consensus 263 ~VRfn~~hdqLiLs~~SDs~V~Lsca~svSS--E~qi~~~-~dese~e~~dseer~kpL~dg-~l~ty-dehEDSVY~~a 337 (370)
T KOG1007|consen 263 AVRFNPEHDQLILSGGSDSAVNLSCASSVSS--EQQIEFE-DDESESEDEDSEERVKPLQDG-QLETY-DEHEDSVYALA 337 (370)
T ss_pred EEEecCccceEEEecCCCceeEEEecccccc--ccccccc-cccccCcchhhHHhccccccc-ccccc-cccccceEEEe
Confidence 999987 4677777776666655433221 1111111 010000 0000011111 12223 37999999999
Q ss_pred EeCCCCcEEEEecCCCeEEEEECCC
Q psy4579 308 YMPQNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 308 ~~p~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
|+.-.+.+||+-|.||.+.|=.+..
T Consensus 338 WSsadPWiFASLSYDGRviIs~V~r 362 (370)
T KOG1007|consen 338 WSSADPWIFASLSYDGRVIISSVPR 362 (370)
T ss_pred eccCCCeeEEEeccCceEEeecCCh
Confidence 9999999999999999999987753
|
|
| >KOG0639|consensus | Back alignment and domain information |
|---|
Probab=99.76 E-value=6.1e-18 Score=146.33 Aligned_cols=256 Identities=13% Similarity=0.146 Sum_probs=178.4
Q ss_pred hhhhhhhhhcCcc---hheeecccccccCceeeEecCCcccccCCCCccccccCcceeeeccccCCCC-CcEEEEEEe--
Q psy4579 17 NEEYKIWKKNTPF---LYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQ-NHLLIASVQ-- 90 (368)
Q Consensus 17 ~~~~~~w~~~~~~---~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~-- 90 (368)
...+|+|...-|- ....+-+-+-+--+++|...|||+.|++|++-.++.|| ++...+.....+ .....++..
T Consensus 439 kgcVKVWdis~pg~k~PvsqLdcl~rdnyiRSckL~pdgrtLivGGeastlsiW--DLAapTprikaeltssapaCyALa 516 (705)
T KOG0639|consen 439 KGCVKVWDISQPGNKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEASTLSIW--DLAAPTPRIKAELTSSAPACYALA 516 (705)
T ss_pred CCeEEEeeccCCCCCCccccccccCcccceeeeEecCCCceEEeccccceeeee--eccCCCcchhhhcCCcchhhhhhh
Confidence 3567889887662 23333333344558899999999999999999988555 555444433311 111122222
Q ss_pred cCCCccccccCCcccCCCCcccCCCCCe-eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccc
Q psy4579 91 LPNEDAQFDASNYDTDKGGNVQLPNEDA-QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVID 169 (368)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~g~i~i~~~~~-~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~ 169 (368)
+.++.+ + -|.+..||.|.|||+.. ..+..+.+|.+.+.||..+++| ..|-||+-|.+||-||++.+.
T Consensus 517 ~spDak-v---cFsccsdGnI~vwDLhnq~~VrqfqGhtDGascIdis~dG-tklWTGGlDntvRcWDlregr------- 584 (705)
T KOG0639|consen 517 ISPDAK-V---CFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISKDG-TKLWTGGLDNTVRCWDLREGR------- 584 (705)
T ss_pred cCCccc-e---eeeeccCCcEEEEEcccceeeecccCCCCCceeEEecCCC-ceeecCCCccceeehhhhhhh-------
Confidence 222221 1 12234599999999976 4567889999999999999999 999999999999999999874
Q ss_pred cceeeecc--ccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeeeccccc
Q psy4579 170 AKTIFTGH--TAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTH 247 (368)
Q Consensus 170 ~~~~~~~h--~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~ 247 (368)
.+..| ++.| +++.++|+ +..++.|-+.+.+-|....... .+.+.-|...|.++.|..
T Consensus 585 ---qlqqhdF~SQI---fSLg~cP~-~dWlavGMens~vevlh~skp~--------kyqlhlheScVLSlKFa~------ 643 (705)
T KOG0639|consen 585 ---QLQQHDFSSQI---FSLGYCPT-GDWLAVGMENSNVEVLHTSKPE--------KYQLHLHESCVLSLKFAY------ 643 (705)
T ss_pred ---hhhhhhhhhhh---eecccCCC-ccceeeecccCcEEEEecCCcc--------ceeecccccEEEEEEecc------
Confidence 23334 3455 69999999 9999999999999988876653 345666888899999875
Q ss_pred CCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEE
Q psy4579 248 TSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLV 327 (368)
Q Consensus 248 ~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~i 327 (368)
..-|..+... +..++.|...-|..+++.+ ....|.++..+-++ .+|+|||.|....|
T Consensus 644 -----cGkwfvStGk---------------DnlLnawrtPyGasiFqsk--E~SsVlsCDIS~dd-kyIVTGSGdkkATV 700 (705)
T KOG0639|consen 644 -----CGKWFVSTGK---------------DNLLNAWRTPYGASIFQSK--ESSSVLSCDISFDD-KYIVTGSGDKKATV 700 (705)
T ss_pred -----cCceeeecCc---------------hhhhhhccCccccceeecc--ccCcceeeeeccCc-eEEEecCCCcceEE
Confidence 1223333211 1123344444455555543 57889999999998 68889999999988
Q ss_pred EEC
Q psy4579 328 FDY 330 (368)
Q Consensus 328 wd~ 330 (368)
|.+
T Consensus 701 YeV 703 (705)
T KOG0639|consen 701 YEV 703 (705)
T ss_pred EEE
Confidence 876
|
|
| >KOG0647|consensus | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.6e-17 Score=133.92 Aligned_cols=214 Identities=14% Similarity=0.147 Sum_probs=146.0
Q ss_pred CCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcE
Q psy4579 127 TDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTI 206 (368)
Q Consensus 127 h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i 206 (368)
-++.|.+|+|||....+++.+|.||+||+|+++..... .-+....|.++| ++++|+.+ +..+++|+.|+.+
T Consensus 26 P~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~-----~~ka~~~~~~Pv---L~v~Wsdd-gskVf~g~~Dk~~ 96 (347)
T KOG0647|consen 26 PEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQL-----VPKAQQSHDGPV---LDVCWSDD-GSKVFSGGCDKQA 96 (347)
T ss_pred cccchheeEeccccCceEEecccCCceEEEEEecCCcc-----cchhhhccCCCe---EEEEEccC-CceEEeeccCCce
Confidence 45789999999965477889999999999999874221 124556789999 69999998 8999999999999
Q ss_pred EEEECCCCCCCCccccceeeeecccccEeEEEEee----ecccccCCCCccceEEEEe-------ecCCccccccc----
Q psy4579 207 CLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR----LILGTHTSDEQNHLLIASV-------QLPNEDAQFDA---- 271 (368)
Q Consensus 207 ~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~----~~~~~~~~d~~~~~~~~~~-------~~~~~~~~~~~---- 271 (368)
++||+.+++ ...+..|..+|.++.|-+ .++++++-|++++.|..+. .+|...-..++
T Consensus 97 k~wDL~S~Q--------~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~LPeRvYa~Dv~~pm 168 (347)
T KOG0647|consen 97 KLWDLASGQ--------VSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQLPERVYAADVLYPM 168 (347)
T ss_pred EEEEccCCC--------eeeeeecccceeEEEEecCCCcceeEecccccceeecccCCCCeeeeeeccceeeehhccCce
Confidence 999999874 456778999999999964 3679999999999996542 23221111110
Q ss_pred ccccCCCCCcccccCCCCceeeeee-cCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeee
Q psy4579 272 SNYDTDKGDFGGFGSVSGKIEIEIK-INHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLR 350 (368)
Q Consensus 272 ~~~d~~~~~~~~~~~~~~~~~~~~~-~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 350 (368)
..--.....+..+.+..+..+.... ..-.-.+.|++..++.+ ..|.||-+|.+.|..+..... ..-..++
T Consensus 169 ~vVata~r~i~vynL~n~~te~k~~~SpLk~Q~R~va~f~d~~-~~alGsiEGrv~iq~id~~~~--------~~nFtFk 239 (347)
T KOG0647|consen 169 AVVATAERHIAVYNLENPPTEFKRIESPLKWQTRCVACFQDKD-GFALGSIEGRVAIQYIDDPNP--------KDNFTFK 239 (347)
T ss_pred eEEEecCCcEEEEEcCCCcchhhhhcCcccceeeEEEEEecCC-ceEeeeecceEEEEecCCCCc--------cCceeEE
Confidence 0000111234444443333222111 01234688999998884 457999999999999975211 2222444
Q ss_pred cccC---------ceeeecceeeee
Q psy4579 351 GHQK---------EGLIEGTYNCYL 366 (368)
Q Consensus 351 gh~~---------~V~~l~w~p~~~ 366 (368)
-|.. +|++++|+|.+.
T Consensus 240 CHR~~~~~~~~VYaVNsi~FhP~hg 264 (347)
T KOG0647|consen 240 CHRSTNSVNDDVYAVNSIAFHPVHG 264 (347)
T ss_pred EeccCCCCCCceEEecceEeecccc
Confidence 5542 467899999764
|
|
| >KOG2055|consensus | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.7e-17 Score=140.92 Aligned_cols=252 Identities=13% Similarity=0.232 Sum_probs=169.0
Q ss_pred cccccCceeeEecCCcc-cccCCCCccccccCcceeeeccc--cCCC--CCcEEEEEEecCCCccccccCCcccCCCCcc
Q psy4579 37 HALEWPSLTAQWLPDVT-SVQLPNEDAQFDASNYDTDKGTH--TSDE--QNHLLIASVQLPNEDAQFDASNYDTDKGGNV 111 (368)
Q Consensus 37 ~~~~~~~~~~~~~p~~~-~l~~~~~~~~~~~~~~~~~~~~~--~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i 111 (368)
+-...|+.++.|.|+|. .+++++....+ ..|++..+.. .... .....+....+++.+..+...+ ..|.|
T Consensus 254 ~l~~fPi~~a~f~p~G~~~i~~s~rrky~--ysyDle~ak~~k~~~~~g~e~~~~e~FeVShd~~fia~~G----~~G~I 327 (514)
T KOG2055|consen 254 HLEKFPIQKAEFAPNGHSVIFTSGRRKYL--YSYDLETAKVTKLKPPYGVEEKSMERFEVSHDSNFIAIAG----NNGHI 327 (514)
T ss_pred eeccCccceeeecCCCceEEEecccceEE--EEeeccccccccccCCCCcccchhheeEecCCCCeEEEcc----cCceE
Confidence 34467999999999999 77778888777 4455543322 2211 1123345555555544333333 57889
Q ss_pred cCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeC
Q psy4579 112 QLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNP 191 (368)
Q Consensus 112 ~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p 191 (368)
.+....+......+.-.+.|..++|+.++ ..|+..+.+|.|.+||++... ++..+....+.-. .+++-++
T Consensus 328 ~lLhakT~eli~s~KieG~v~~~~fsSds-k~l~~~~~~GeV~v~nl~~~~-------~~~rf~D~G~v~g--ts~~~S~ 397 (514)
T KOG2055|consen 328 HLLHAKTKELITSFKIEGVVSDFTFSSDS-KELLASGGTGEVYVWNLRQNS-------CLHRFVDDGSVHG--TSLCISL 397 (514)
T ss_pred EeehhhhhhhhheeeeccEEeeEEEecCC-cEEEEEcCCceEEEEecCCcc-------eEEEEeecCccce--eeeeecC
Confidence 99888777666667788999999999999 888888889999999999874 4455553322211 3777788
Q ss_pred CCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee--ecccccCCCCccceEEEEeecCCccccc
Q psy4579 192 SLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LILGTHTSDEQNHLLIASVQLPNEDAQF 269 (368)
Q Consensus 192 ~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 269 (368)
+ +.+||+||..|.|.|||..+-.... .-+|+..+..-...|+++.|++ .+++.++....+.+.+.-+..
T Consensus 398 n-g~ylA~GS~~GiVNIYd~~s~~~s~-~PkPik~~dNLtt~Itsl~Fn~d~qiLAiaS~~~knalrLVHvPS------- 468 (514)
T KOG2055|consen 398 N-GSYLATGSDSGIVNIYDGNSCFAST-NPKPIKTVDNLTTAITSLQFNHDAQILAIASRVKKNALRLVHVPS------- 468 (514)
T ss_pred C-CceEEeccCcceEEEeccchhhccC-CCCchhhhhhhheeeeeeeeCcchhhhhhhhhccccceEEEeccc-------
Confidence 8 8899999999999999965532111 1156677777788899999986 355555544444443332100
Q ss_pred ccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECC
Q psy4579 270 DASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYT 331 (368)
Q Consensus 270 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~ 331 (368)
...| .-|... ...-+.|+|++|+|.+ .+||.|.++|.+.+|.+.
T Consensus 469 -~TVF-------sNfP~~---------n~~vg~vtc~aFSP~s-G~lAvGNe~grv~l~kL~ 512 (514)
T KOG2055|consen 469 -CTVF-------SNFPTS---------NTKVGHVTCMAFSPNS-GYLAVGNEAGRVHLFKLH 512 (514)
T ss_pred -eeee-------ccCCCC---------CCcccceEEEEecCCC-ceEEeecCCCceeeEeec
Confidence 0000 000000 1234569999999998 699999999999999984
|
|
| >KOG0303|consensus | Back alignment and domain information |
|---|
Probab=99.76 E-value=7.8e-17 Score=135.65 Aligned_cols=238 Identities=17% Similarity=0.277 Sum_probs=168.9
Q ss_pred EEEEEEecC----CCccccccCCcccCCCCcccCCCCC--eee---eeccccCCCCceeeEecCCCCCeeEEEeCCCcEE
Q psy4579 84 LLIASVQLP----NEDAQFDASNYDTDKGGNVQLPNED--AQF---DASNYDTDKGGYGLSWNPSLNGYLLSASDDHTIC 154 (368)
Q Consensus 84 ~~i~~~~~~----~~~~~~~~~~~~~~~~g~i~i~~~~--~~~---~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~ 154 (368)
+.|+...|. ..+.++.+..+..++.|...+..+. ++. .-...+|+++|..++|+|.+...||+||.|-+|.
T Consensus 28 IrVs~~tWDS~fcavNPkfiAvi~easgGgaf~ViPl~k~Gr~d~~~P~v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~ 107 (472)
T KOG0303|consen 28 IRVSRVTWDSSFCAVNPKFVAVIIEASGGGAFLVIPLVKTGRMDASYPLVCGHTAPVLDIDWCPFNDCVIASGSEDTKVM 107 (472)
T ss_pred eeeeeeeccccccccCCceEEEEEecCCCcceeecccccccccCCCCCCccCccccccccccCccCCceeecCCCCceEE
Confidence 456666653 3455666666776777777776654 222 2245789999999999998878999999999999
Q ss_pred EEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccE
Q psy4579 155 LWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVV 234 (368)
Q Consensus 155 iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v 234 (368)
||++..+.......++...+.||...|. -++|+|.-.+.|+|++.|.+|.+||+.++. .+..+. |...|
T Consensus 108 vW~IPe~~l~~~ltepvv~L~gH~rrVg---~V~wHPtA~NVLlsag~Dn~v~iWnv~tge-------ali~l~-hpd~i 176 (472)
T KOG0303|consen 108 VWQIPENGLTRDLTEPVVELYGHQRRVG---LVQWHPTAPNVLLSAGSDNTVSIWNVGTGE-------ALITLD-HPDMV 176 (472)
T ss_pred EEECCCcccccCcccceEEEeecceeEE---EEeecccchhhHhhccCCceEEEEeccCCc-------eeeecC-CCCeE
Confidence 9999877665556678899999999996 999999988999999999999999999984 345565 99999
Q ss_pred eEEEEee--ecccccCCCCccceEEEEee------------------cCCcccccccccccC-CCCCcccccCCCCceee
Q psy4579 235 EDYSIHR--LILGTHTSDEQNHLLIASVQ------------------LPNEDAQFDASNYDT-DKGDFGGFGSVSGKIEI 293 (368)
Q Consensus 235 ~~v~~~~--~~~~~~~~d~~~~~~~~~~~------------------~~~~~~~~~~~~~d~-~~~~~~~~~~~~~~~~~ 293 (368)
.+++|+. ..+.+.+.|+.+++|.-... +-.+.. +....+.. ....+.+|+...-+...
T Consensus 177 ~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~v~e~~~heG~k~~Raifl~~g~-i~tTGfsr~seRq~aLwdp~nl~eP~ 255 (472)
T KOG0303|consen 177 YSMSFNRDGSLLCTTCKDKKVRVIDPRRGTVVSEGVAHEGAKPARAIFLASGK-IFTTGFSRMSERQIALWDPNNLEEPI 255 (472)
T ss_pred EEEEeccCCceeeeecccceeEEEcCCCCcEeeecccccCCCcceeEEeccCc-eeeeccccccccceeccCcccccCcc
Confidence 9999974 68888899998888832110 111111 22222221 11234555554333222
Q ss_pred eee-cCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCC
Q psy4579 294 EIK-INHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKH 333 (368)
Q Consensus 294 ~~~-~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~ 333 (368)
.+. ......|.---|.|+..-+.+.|-.|+.||-|.+...
T Consensus 256 ~~~elDtSnGvl~PFyD~dt~ivYl~GKGD~~IRYyEit~d 296 (472)
T KOG0303|consen 256 ALQELDTSNGVLLPFYDPDTSIVYLCGKGDSSIRYFEITNE 296 (472)
T ss_pred eeEEeccCCceEEeeecCCCCEEEEEecCCcceEEEEecCC
Confidence 221 1345566656677887666677888999999999763
|
|
| >KOG1273|consensus | Back alignment and domain information |
|---|
Probab=99.76 E-value=4.4e-17 Score=133.41 Aligned_cols=179 Identities=16% Similarity=0.257 Sum_probs=115.8
Q ss_pred ceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEE
Q psy4579 131 GYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWD 210 (368)
Q Consensus 131 v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd 210 (368)
-.|+.|++.| .+||+|+.||.|-|||+.+.. +.+.+.+|..+|+ +++|+++ +.+|+|+|.|.+|++||
T Consensus 26 a~~~~Fs~~G-~~lAvGc~nG~vvI~D~~T~~-------iar~lsaH~~pi~---sl~WS~d-gr~LltsS~D~si~lwD 93 (405)
T KOG1273|consen 26 AECCQFSRWG-DYLAVGCANGRVVIYDFDTFR-------IARMLSAHVRPIT---SLCWSRD-GRKLLTSSRDWSIKLWD 93 (405)
T ss_pred cceEEeccCc-ceeeeeccCCcEEEEEccccc-------hhhhhhcccccee---EEEecCC-CCEeeeecCCceeEEEe
Confidence 7899999999 999999999999999999875 5688999999997 9999999 99999999999999999
Q ss_pred CCCCCCCCccccceeeeecccccEeEEEEeee----cccccCCCCccceEEEE----eecCC-cccccc-cc---ccc--
Q psy4579 211 INATPKENRVIDAKTIFTGHTAVVEDYSIHRL----ILGTHTSDEQNHLLIAS----VQLPN-EDAQFD-AS---NYD-- 275 (368)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~----~~~~~~~d~~~~~~~~~----~~~~~-~~~~~~-~~---~~d-- 275 (368)
+..+. +++.+. ...+|+.+.|+|. ++++.-. ....+...+ .-++. ++.... .. .||
T Consensus 94 l~~gs-------~l~rir-f~spv~~~q~hp~k~n~~va~~~~-~sp~vi~~s~~~h~~Lp~d~d~dln~sas~~~fdr~ 164 (405)
T KOG1273|consen 94 LLKGS-------PLKRIR-FDSPVWGAQWHPRKRNKCVATIME-ESPVVIDFSDPKHSVLPKDDDGDLNSSASHGVFDRR 164 (405)
T ss_pred ccCCC-------ceeEEE-ccCccceeeeccccCCeEEEEEec-CCcEEEEecCCceeeccCCCccccccccccccccCC
Confidence 99984 344443 4567777777751 1111111 111111111 00110 011110 00 122
Q ss_pred -------CCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECC
Q psy4579 276 -------TDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYT 331 (368)
Q Consensus 276 -------~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~ 331 (368)
...|.+.+++..+-++...+++.-...|..+.|+-.| ..|+.-+.|..||.|+++
T Consensus 165 g~yIitGtsKGkllv~~a~t~e~vas~rits~~~IK~I~~s~~g-~~liiNtsDRvIR~ye~~ 226 (405)
T KOG1273|consen 165 GKYIITGTSKGKLLVYDAETLECVASFRITSVQAIKQIIVSRKG-RFLIINTSDRVIRTYEIS 226 (405)
T ss_pred CCEEEEecCcceEEEEecchheeeeeeeechheeeeEEEEeccC-cEEEEecCCceEEEEehh
Confidence 1223344444444444444443333567777777777 455577778888888776
|
|
| >KOG0267|consensus | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.3e-18 Score=154.91 Aligned_cols=192 Identities=19% Similarity=0.255 Sum_probs=152.4
Q ss_pred cccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEE
Q psy4579 110 NVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSW 189 (368)
Q Consensus 110 ~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~ 189 (368)
.+++|+.. .+..|...|.|+..-..+ +.+++|+.|..+-+|.+.... ++..+.+|+.+|. ++.|
T Consensus 15 ~Lr~~~~~-----~~~~hsaav~~lk~~~s~-r~~~~Gg~~~k~~L~~i~kp~-------~i~S~~~hespIe---Sl~f 78 (825)
T KOG0267|consen 15 KLRVWDTR-----EFVAHSAAVGCLKIRKSS-RSLVTGGEDEKVNLWAIGKPN-------AITSLTGHESPIE---SLTF 78 (825)
T ss_pred ccccccch-----hhhhhhhhhceeeeeccc-eeeccCCCceeeccccccCCc-------hhheeeccCCcce---eeec
Confidence 34556553 234588899999886565 899999999999999987754 4567999999998 9999
Q ss_pred eCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeee--cccccCCCCccceEEEEeecCCccc
Q psy4579 190 NPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRL--ILGTHTSDEQNHLLIASVQLPNEDA 267 (368)
Q Consensus 190 ~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~--~~~~~~~d~~~~~~~~~~~~~~~~~ 267 (368)
++. ..+|++|+.+|+|++||++.. ..++++.+|...+.++.|+|. ++++++.|..
T Consensus 79 ~~~-E~LlaagsasgtiK~wDleeA-------k~vrtLtgh~~~~~sv~f~P~~~~~a~gStdtd--------------- 135 (825)
T KOG0267|consen 79 DTS-ERLLAAGSASGTIKVWDLEEA-------KIVRTLTGHLLNITSVDFHPYGEFFASGSTDTD--------------- 135 (825)
T ss_pred Ccc-hhhhcccccCCceeeeehhhh-------hhhhhhhccccCcceeeeccceEEecccccccc---------------
Confidence 998 899999999999999999986 446789999999999999984 2333443332
Q ss_pred ccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCce
Q psy4579 268 QFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDL 347 (368)
Q Consensus 268 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~ 347 (368)
+.+||.+...+...+. +|...|..+.|+|+| .++++|++|.+++|||+.. .....
T Consensus 136 -------------~~iwD~Rk~Gc~~~~~-s~~~vv~~l~lsP~G-r~v~~g~ed~tvki~d~~a----------gk~~~ 190 (825)
T KOG0267|consen 136 -------------LKIWDIRKKGCSHTYK-SHTRVVDVLRLSPDG-RWVASGGEDNTVKIWDLTA----------GKLSK 190 (825)
T ss_pred -------------ceehhhhccCceeeec-CCcceeEEEeecCCC-ceeeccCCcceeeeecccc----------ccccc
Confidence 3344444444455555 799999999999999 7999999999999999975 34445
Q ss_pred eeecccCceeeecceeee
Q psy4579 348 RLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 348 ~~~gh~~~V~~l~w~p~~ 365 (368)
.|.+|++.|.+++|+|.-
T Consensus 191 ef~~~e~~v~sle~hp~e 208 (825)
T KOG0267|consen 191 EFKSHEGKVQSLEFHPLE 208 (825)
T ss_pred ccccccccccccccCchh
Confidence 788999999999999863
|
|
| >KOG0294|consensus | Back alignment and domain information |
|---|
Probab=99.74 E-value=4.9e-17 Score=133.10 Aligned_cols=208 Identities=18% Similarity=0.196 Sum_probs=143.2
Q ss_pred eccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCC-CCeEEEe
Q psy4579 122 ASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSL-NGYLLSA 200 (368)
Q Consensus 122 ~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~-~~~l~s~ 200 (368)
..+..|.+.|++++.+ + .++|+||.|-+|+|||+.+.. ....+..|.+.++ ++.|.+.. .+.|++|
T Consensus 37 F~~~aH~~sitavAVs--~-~~~aSGssDetI~IYDm~k~~-------qlg~ll~Hagsit---aL~F~~~~S~shLlS~ 103 (362)
T KOG0294|consen 37 FAFSAHAGSITALAVS--G-PYVASGSSDETIHIYDMRKRK-------QLGILLSHAGSIT---ALKFYPPLSKSHLLSG 103 (362)
T ss_pred ccccccccceeEEEec--c-eeEeccCCCCcEEEEeccchh-------hhcceeccccceE---EEEecCCcchhheeee
Confidence 3456799999999998 3 799999999999999998865 4577888999997 99998862 2389999
Q ss_pred eCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee--ecccccCCCCccceEEEEe---ecCCcccc-cccccc
Q psy4579 201 SDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LILGTHTSDEQNHLLIASV---QLPNEDAQ-FDASNY 274 (368)
Q Consensus 201 s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~d~~~~~~~~~~---~~~~~~~~-~~~~~~ 274 (368)
+.||.|.+|+...- ..+..+++|...|+.++.|| .+..+.++|...+.|-.-- .+--..+. -....|
T Consensus 104 sdDG~i~iw~~~~W-------~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr~a~v~~L~~~at~v~w 176 (362)
T KOG0294|consen 104 SDDGHIIIWRVGSW-------ELLKSLKAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVRGRVAFVLNLKNKATLVSW 176 (362)
T ss_pred cCCCcEEEEEcCCe-------EEeeeecccccccceeEecCCCceEEEEcCCceeeeehhhcCccceeeccCCcceeeEE
Confidence 99999999998774 67889999999999999997 3445556666666663210 00000000 000122
Q ss_pred cCCCCC---------cccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCC
Q psy4579 275 DTDKGD---------FGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHP 345 (368)
Q Consensus 275 d~~~~~---------~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~ 345 (368)
+. .|. +.+|.+.+.++...+ .....+.++.|-..+ .|++|..|+.|++||-.. ..+
T Consensus 177 ~~-~Gd~F~v~~~~~i~i~q~d~A~v~~~i--~~~~r~l~~~~l~~~--~L~vG~d~~~i~~~D~ds----------~~~ 241 (362)
T KOG0294|consen 177 SP-QGDHFVVSGRNKIDIYQLDNASVFREI--ENPKRILCATFLDGS--ELLVGGDNEWISLKDTDS----------DTP 241 (362)
T ss_pred cC-CCCEEEEEeccEEEEEecccHhHhhhh--hccccceeeeecCCc--eEEEecCCceEEEeccCC----------Ccc
Confidence 21 111 122222222221111 223457777776655 455999999999999874 466
Q ss_pred ceeeecccCceeeecceee
Q psy4579 346 DLRLRGHQKEGLIEGTYNC 364 (368)
Q Consensus 346 ~~~~~gh~~~V~~l~w~p~ 364 (368)
...+.+|.++|-++.+--+
T Consensus 242 ~~~~~AH~~RVK~i~~~~~ 260 (362)
T KOG0294|consen 242 LTEFLAHENRVKDIASYTN 260 (362)
T ss_pred ceeeecchhheeeeEEEec
Confidence 6788899999999886544
|
|
| >KOG0278|consensus | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.7e-17 Score=131.62 Aligned_cols=217 Identities=13% Similarity=0.150 Sum_probs=162.6
Q ss_pred hhhhhhhhhhcCcchheeecccccccCceeeEecCCcccccCCCCccccccCcceeeeccccCCCCCcEEEEEEecCCCc
Q psy4579 16 INEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNED 95 (368)
Q Consensus 16 ~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 95 (368)
-+=.-|+|+.-+. +.+.+..+.+=|.+|+|+.|..+|++|+.++.+++++.+-.......-....-.|..+.|...+
T Consensus 79 adftakvw~a~tg---delhsf~hkhivk~~af~~ds~~lltgg~ekllrvfdln~p~App~E~~ghtg~Ir~v~wc~eD 155 (334)
T KOG0278|consen 79 ADFTAKVWDAVTG---DELHSFEHKHIVKAVAFSQDSNYLLTGGQEKLLRVFDLNRPKAPPKEISGHTGGIRTVLWCHED 155 (334)
T ss_pred ccchhhhhhhhhh---hhhhhhhhhheeeeEEecccchhhhccchHHHhhhhhccCCCCCchhhcCCCCcceeEEEeccC
Confidence 3445688988766 3455566677899999999999999999999885554332211111112223458888888877
Q ss_pred cccccCCcccCCCCcccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeee
Q psy4579 96 AQFDASNYDTDKGGNVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFT 175 (368)
Q Consensus 96 ~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~ 175 (368)
..+..+. .|++|++||............+.+|+++..+++| ++| +-+..+.|++||..+.. +++.++
T Consensus 156 ~~iLSSa----dd~tVRLWD~rTgt~v~sL~~~s~VtSlEvs~dG-~il-Tia~gssV~Fwdaksf~-------~lKs~k 222 (334)
T KOG0278|consen 156 KCILSSA----DDKTVRLWDHRTGTEVQSLEFNSPVTSLEVSQDG-RIL-TIAYGSSVKFWDAKSFG-------LLKSYK 222 (334)
T ss_pred ceEEeec----cCCceEEEEeccCcEEEEEecCCCCcceeeccCC-CEE-EEecCceeEEecccccc-------ceeecc
Confidence 7777653 5899999998876666666678899999999998 554 55567899999998763 334443
Q ss_pred ccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeee-ecccccEeEEEEee--ecccccCCCCc
Q psy4579 176 GHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIF-TGHTAVVEDYSIHR--LILGTHTSDEQ 252 (368)
Q Consensus 176 ~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~v~~v~~~~--~~~~~~~~d~~ 252 (368)
-. ..|. +.+.+|+ ...++.|++|..++.||..++.. +..+ ++|..+|.|+.|+| .+.++++.|++
T Consensus 223 ~P-~nV~---SASL~P~-k~~fVaGged~~~~kfDy~TgeE-------i~~~nkgh~gpVhcVrFSPdGE~yAsGSEDGT 290 (334)
T KOG0278|consen 223 MP-CNVE---SASLHPK-KEFFVAGGEDFKVYKFDYNTGEE-------IGSYNKGHFGPVHCVRFSPDGELYASGSEDGT 290 (334)
T ss_pred Cc-cccc---cccccCC-CceEEecCcceEEEEEeccCCce-------eeecccCCCCceEEEEECCCCceeeccCCCce
Confidence 32 2343 7888999 79999999999999999999853 3343 88999999999997 68899999999
Q ss_pred cceEEEEe
Q psy4579 253 NHLLIASV 260 (368)
Q Consensus 253 ~~~~~~~~ 260 (368)
+++|....
T Consensus 291 irlWQt~~ 298 (334)
T KOG0278|consen 291 IRLWQTTP 298 (334)
T ss_pred EEEEEecC
Confidence 99997654
|
|
| >KOG2096|consensus | Back alignment and domain information |
|---|
Probab=99.73 E-value=1e-16 Score=131.52 Aligned_cols=176 Identities=17% Similarity=0.246 Sum_probs=105.9
Q ss_pred eccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCC-cc----cc------------------------cce
Q psy4579 122 ASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKEN-RV----ID------------------------AKT 172 (368)
Q Consensus 122 ~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~-~~----~~------------------------~~~ 172 (368)
..+.+|.+.|++++|+.+| +.|||++.|++|++|+++....+. +. .+ .+.
T Consensus 80 ~~LKgH~~~vt~~~FsSdG-K~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~dhpT~V~FapDc~s~vv~~~~g~~l~ 158 (420)
T KOG2096|consen 80 SVLKGHKKEVTDVAFSSDG-KKLATISGDRSIRLWDVRDFENKEHRCIRQNVEYDHPTRVVFAPDCKSVVVSVKRGNKLC 158 (420)
T ss_pred hhhhccCCceeeeEEcCCC-ceeEEEeCCceEEEEecchhhhhhhhHhhccccCCCceEEEECCCcceEEEEEccCCEEE
Confidence 3578899999999999999 999999999999999997542100 00 00 000
Q ss_pred -----------------------eeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeec
Q psy4579 173 -----------------------IFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTG 229 (368)
Q Consensus 173 -----------------------~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 229 (368)
..+.|.-.+ ..+-.... +.+|+|++.|..|.|||++.. .+..+..
T Consensus 159 vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~---i~iGiA~~-~k~imsas~dt~i~lw~lkGq--------~L~~idt 226 (420)
T KOG2096|consen 159 VYKLVKKTDGSGSHHFVHIDNLEFERKHQVDI---INIGIAGN-AKYIMSASLDTKICLWDLKGQ--------LLQSIDT 226 (420)
T ss_pred EEEeeecccCCCCcccccccccccchhcccce---EEEeecCC-ceEEEEecCCCcEEEEecCCc--------eeeeecc
Confidence 000122222 13333333 668888889999999988742 2333333
Q ss_pred ccccEeEEEEee--ecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEE
Q psy4579 230 HTAVVEDYSIHR--LILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRAR 307 (368)
Q Consensus 230 ~~~~v~~v~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~ 307 (368)
....-+..+.+| ..++.++....+.+|-.... +.|.+ ..-....++. +|...|..++
T Consensus 227 nq~~n~~aavSP~GRFia~~gFTpDVkVwE~~f~---------------kdG~f-----qev~rvf~Lk-GH~saV~~~a 285 (420)
T KOG2096|consen 227 NQSSNYDAAVSPDGRFIAVSGFTPDVKVWEPIFT---------------KDGTF-----QEVKRVFSLK-GHQSAVLAAA 285 (420)
T ss_pred ccccccceeeCCCCcEEEEecCCCCceEEEEEec---------------cCcch-----hhhhhhheec-cchhheeeee
Confidence 322333334443 33333333344444432221 11111 0011233444 9999999999
Q ss_pred EeCCCCcEEEEecCCCeEEEEECCC
Q psy4579 308 YMPQNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 308 ~~p~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
|+|+. .-++|.|.||+++|||..-
T Consensus 286 Fsn~S-~r~vtvSkDG~wriwdtdV 309 (420)
T KOG2096|consen 286 FSNSS-TRAVTVSKDGKWRIWDTDV 309 (420)
T ss_pred eCCCc-ceeEEEecCCcEEEeeccc
Confidence 99999 5667999999999999864
|
|
| >KOG4328|consensus | Back alignment and domain information |
|---|
Probab=99.73 E-value=7.4e-17 Score=138.14 Aligned_cols=278 Identities=14% Similarity=0.172 Sum_probs=180.4
Q ss_pred cccccCceeeEecCCcc--cccCCCCccccccCcceeeeccccC---CCCCcEEEEEEec-CCCccccccCCcccCCCCc
Q psy4579 37 HALEWPSLTAQWLPDVT--SVQLPNEDAQFDASNYDTDKGTHTS---DEQNHLLIASVQL-PNEDAQFDASNYDTDKGGN 110 (368)
Q Consensus 37 ~~~~~~~~~~~~~p~~~--~l~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~g~ 110 (368)
..+..++.+++|+|..+ .+|+|...|.|=+|++......... ...+--.|.++.| |.+...+..+ +.||+
T Consensus 183 kv~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~ss----SyDGt 258 (498)
T KOG4328|consen 183 KVTDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQIYSS----SYDGT 258 (498)
T ss_pred EecccceEEEEecccCcceEEEEccCCCcEEEEecCCCCCccCceEEeccCCccccceEecCCChhheeee----ccCce
Confidence 44678899999999865 6888889999877766411110000 0222234777777 4444444444 46899
Q ss_pred ccCCCCCeeee---eccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceee
Q psy4579 111 VQLPNEDAQFD---ASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGL 187 (368)
Q Consensus 111 i~i~~~~~~~~---~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i 187 (368)
|++-|.++... ..+..-..-+..+.|+.+. ..++.|..=|...+||.+..+. ....+.-|...|+ ++
T Consensus 259 iR~~D~~~~i~e~v~s~~~d~~~fs~~d~~~e~-~~vl~~~~~G~f~~iD~R~~~s------~~~~~~lh~kKI~---sv 328 (498)
T KOG4328|consen 259 IRLQDFEGNISEEVLSLDTDNIWFSSLDFSAES-RSVLFGDNVGNFNVIDLRTDGS------EYENLRLHKKKIT---SV 328 (498)
T ss_pred eeeeeecchhhHHHhhcCccceeeeeccccCCC-ccEEEeecccceEEEEeecCCc------cchhhhhhhcccc---ee
Confidence 99988876432 3333344567788999887 6666776667999999998764 2455667888897 99
Q ss_pred EEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee--ecccccCCCCccceEEEEee---c
Q psy4579 188 SWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LILGTHTSDEQNHLLIASVQ---L 262 (368)
Q Consensus 188 ~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~d~~~~~~~~~~~---~ 262 (368)
+++|....+|||+|.|++++|||+|...... .|+.....|...|+++.|+| ..+.+.+.|..+++|..+.- +
T Consensus 329 ~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~---sp~lst~~HrrsV~sAyFSPs~gtl~TT~~D~~IRv~dss~~sa~~ 405 (498)
T KOG4328|consen 329 ALNPVCPWFLATASLDQTAKIWDLRQLRGKA---SPFLSTLPHRRSVNSAYFSPSGGTLLTTCQDNEIRVFDSSCISAKD 405 (498)
T ss_pred ecCCCCchheeecccCcceeeeehhhhcCCC---CcceecccccceeeeeEEcCCCCceEeeccCCceEEeecccccccC
Confidence 9999988899999999999999999864322 12334456999999999997 34677777777888766311 0
Q ss_pred CC--------cccccc---cccccCCCC---------CcccccCCCCceeeeeecCcccceeEE-EEeCCCCcEEEEecC
Q psy4579 263 PN--------EDAQFD---ASNYDTDKG---------DFGGFGSVSGKIEIEIKINHEGEVNRA-RYMPQNPCVIATKTP 321 (368)
Q Consensus 263 ~~--------~~~~~~---~~~~d~~~~---------~~~~~~~~~~~~~~~~~~~h~~~i~~~-~~~p~~~~~lasgs~ 321 (368)
.+ ....+. -..||.+.. .+.+++...++...++...-...|.++ +|+|.+..++|.|+.
T Consensus 406 ~p~~~I~Hn~~t~RwlT~fKA~W~P~~~li~vg~~~r~IDv~~~~~~q~v~el~~P~~~tI~~vn~~HP~~~~~~aG~~s 485 (498)
T KOG4328|consen 406 EPLGTIPHNNRTGRWLTPFKAAWDPDYNLIVVGRYPRPIDVFDGNGGQMVCELHDPESSTIPSVNEFHPMRDTLAAGGNS 485 (498)
T ss_pred CccceeeccCcccccccchhheeCCCccEEEEeccCcceeEEcCCCCEEeeeccCccccccccceeecccccceeccCCc
Confidence 00 000111 123443222 133344455554444432333356554 899999557777778
Q ss_pred CCeEEEEECC
Q psy4579 322 SSDVLVFDYT 331 (368)
Q Consensus 322 Dg~i~iwd~~ 331 (368)
-|.|.||--.
T Consensus 486 ~Gki~vft~k 495 (498)
T KOG4328|consen 486 SGKIYVFTNK 495 (498)
T ss_pred cceEEEEecC
Confidence 8999998653
|
|
| >KOG1034|consensus | Back alignment and domain information |
|---|
Probab=99.73 E-value=6.3e-17 Score=133.20 Aligned_cols=213 Identities=15% Similarity=0.221 Sum_probs=142.8
Q ss_pred CCCcccCCCCCe-eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCccccccee---eecccccee
Q psy4579 107 KGGNVQLPNEDA-QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTI---FTGHTAVVE 182 (368)
Q Consensus 107 ~~g~i~i~~~~~-~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~---~~~h~~~v~ 182 (368)
.-|-|++.|... ++.....+|...|+.|++.|..++++++||.|.+||+|++++.. ++.. +.||.+.|
T Consensus 113 ~~GvIrVid~~~~~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~-------Cv~VfGG~egHrdeV- 184 (385)
T KOG1034|consen 113 YLGVIRVIDVVSGQCSKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDV-------CVAVFGGVEGHRDEV- 184 (385)
T ss_pred ceeEEEEEecchhhhccceeccCccchhhhcCCCCCcEEEEecCCceEEEEeccCCe-------EEEEecccccccCcE-
Confidence 358899999864 66777899999999999999999999999999999999999875 3444 45799999
Q ss_pred cceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCcc-----------c-------ccee---eeecccccEeEEEEee
Q psy4579 183 VRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRV-----------I-------DAKT---IFTGHTAVVEDYSIHR 241 (368)
Q Consensus 183 ~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~-----------~-------~~~~---~~~~~~~~v~~v~~~~ 241 (368)
+++.|+++ +.+|+|++.|.++++|++....-...+ . .+.. +-..|...|-|+.|-.
T Consensus 185 --LSvD~~~~-gd~i~ScGmDhslk~W~l~~~~f~~~lE~s~~~~~~~t~~pfpt~~~~fp~fst~diHrnyVDCvrw~g 261 (385)
T KOG1034|consen 185 --LSVDFSLD-GDRIASCGMDHSLKLWRLNVKEFKNKLELSITYSPNKTTRPFPTPKTHFPDFSTTDIHRNYVDCVRWFG 261 (385)
T ss_pred --EEEEEcCC-CCeeeccCCcceEEEEecChhHHhhhhhhhcccCCCCccCcCCccccccccccccccccchHHHHHHHh
Confidence 69999999 889999999999999999853211100 0 1111 2234777777777765
Q ss_pred ecccccCCCCccceEEE---------------------EeecCCccccccccccc---------CCCCCcccccCCCCce
Q psy4579 242 LILGTHTSDEQNHLLIA---------------------SVQLPNEDAQFDASNYD---------TDKGDFGGFGSVSGKI 291 (368)
Q Consensus 242 ~~~~~~~~d~~~~~~~~---------------------~~~~~~~~~~~~~~~~d---------~~~~~~~~~~~~~~~~ 291 (368)
.++.+.+.++.+..|.- ...++..+.-+....+| ...|.+..|++.....
T Consensus 262 d~ilSkscenaI~~w~pgkl~e~~~~vkp~es~~Ti~~~~~~~~c~iWfirf~~d~~~~~la~gnq~g~v~vwdL~~~ep 341 (385)
T KOG1034|consen 262 DFILSKSCENAIVCWKPGKLEESIHNVKPPESATTILGEFDYPMCDIWFIRFAFDPWQKMLALGNQSGKVYVWDLDNNEP 341 (385)
T ss_pred hheeecccCceEEEEecchhhhhhhccCCCccceeeeeEeccCccceEEEEEeecHHHHHHhhccCCCcEEEEECCCCCC
Confidence 44444444333333311 00111111111111111 3445667777766555
Q ss_pred eeeeecCc---ccceeEEEEeCCCCcEEEEecCCCeEEEEECC
Q psy4579 292 EIEIKINH---EGEVNRARYMPQNPCVIATKTPSSDVLVFDYT 331 (368)
Q Consensus 292 ~~~~~~~h---~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~ 331 (368)
.......| ...|...+|+-++ .+|+...+|++|.-||..
T Consensus 342 ~~~ttl~~s~~~~tVRQ~sfS~dg-s~lv~vcdd~~Vwrwdrv 383 (385)
T KOG1034|consen 342 PKCTTLTHSKSGSTVRQTSFSRDG-SILVLVCDDGTVWRWDRV 383 (385)
T ss_pred ccCceEEeccccceeeeeeecccC-cEEEEEeCCCcEEEEEee
Confidence 32222123 3478899999999 577778899999999964
|
|
| >KOG0270|consensus | Back alignment and domain information |
|---|
Probab=99.73 E-value=8.9e-17 Score=137.17 Aligned_cols=248 Identities=21% Similarity=0.256 Sum_probs=179.1
Q ss_pred cccCceeeEecCC-------cccccCCCCccccccCcceeee--------ccccCC-----------CCCcE-EEEEEec
Q psy4579 39 LEWPSLTAQWLPD-------VTSVQLPNEDAQFDASNYDTDK--------GTHTSD-----------EQNHL-LIASVQL 91 (368)
Q Consensus 39 ~~~~~~~~~~~p~-------~~~l~~~~~~~~~~~~~~~~~~--------~~~~~~-----------~~~~~-~i~~~~~ 91 (368)
++-+.+|+.|..- |+++|+|.-+..|.||+.++.. |...+. .+.+. .+..+.+
T Consensus 172 lpafPLC~ewld~~~~~~~~gNyvAiGtmdp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~ 251 (463)
T KOG0270|consen 172 LPAFPLCIEWLDHGSKSGGAGNYVAIGTMDPEIEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSW 251 (463)
T ss_pred ccCcchhhhhhhcCCCCCCCcceEEEeccCceeEEeccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHh
Confidence 4556789999633 7789999999999999887652 211111 00111 1222333
Q ss_pred CCCccccccCCcccCCCCcccCCCCCeeeee-ccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCccccc
Q psy4579 92 PNEDAQFDASNYDTDKGGNVQLPNEDAQFDA-SNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDA 170 (368)
Q Consensus 92 ~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~-~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~ 170 (368)
......+.+++ +.|.+|++||++..... ++..|.+.|.+++|+|..+..|++|+.|++|.+.|.+.... .
T Consensus 252 n~~~~nVLaSg---saD~TV~lWD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~------s 322 (463)
T KOG0270|consen 252 NRNFRNVLASG---SADKTVKLWDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSN------S 322 (463)
T ss_pred ccccceeEEec---CCCceEEEEEcCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCccc------c
Confidence 33333445555 67999999999864444 45568999999999999889999999999999999985332 1
Q ss_pred ceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEe---eeccccc
Q psy4579 171 KTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIH---RLILGTH 247 (368)
Q Consensus 171 ~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~---~~~~~~~ 247 (368)
-..++ -.+.|. .++|.|.....++++..||+|+-+|+|... +++.+++.|..+|.+++++ |.++.++
T Consensus 323 ~~~wk-~~g~VE---kv~w~~~se~~f~~~tddG~v~~~D~R~~~------~~vwt~~AHd~~ISgl~~n~~~p~~l~t~ 392 (463)
T KOG0270|consen 323 GKEWK-FDGEVE---KVAWDPHSENSFFVSTDDGTVYYFDIRNPG------KPVWTLKAHDDEISGLSVNIQTPGLLSTA 392 (463)
T ss_pred CceEE-eccceE---EEEecCCCceeEEEecCCceEEeeecCCCC------CceeEEEeccCCcceEEecCCCCcceeec
Confidence 12233 345676 899999878889999999999999999975 5688999999999999997 5788888
Q ss_pred CCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEE
Q psy4579 248 TSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLV 327 (368)
Q Consensus 248 ~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~i 327 (368)
+.++.+.+|-.....+... . ...+ .-+...|.++.|+-+.++|.|+..+.++|
T Consensus 393 s~d~~Vklw~~~~~~~~~v----------------------~--~~~~---~~~rl~c~~~~~~~a~~la~GG~k~~~~v 445 (463)
T KOG0270|consen 393 STDKVVKLWKFDVDSPKSV----------------------K--EHSF---KLGRLHCFALDPDVAFTLAFGGEKAVLRV 445 (463)
T ss_pred cccceEEEEeecCCCCccc----------------------c--cccc---cccceeecccCCCcceEEEecCccceEEE
Confidence 8888888886543211100 0 0001 11236778889998899999999999999
Q ss_pred EECCC
Q psy4579 328 FDYTK 332 (368)
Q Consensus 328 wd~~~ 332 (368)
||+..
T Consensus 446 wd~~~ 450 (463)
T KOG0270|consen 446 WDIFT 450 (463)
T ss_pred eeccc
Confidence 99976
|
|
| >KOG0321|consensus | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.1e-16 Score=142.38 Aligned_cols=240 Identities=16% Similarity=0.226 Sum_probs=152.8
Q ss_pred CCCCcccCCCCCee-e------eeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccc
Q psy4579 106 DKGGNVQLPNEDAQ-F------DASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHT 178 (368)
Q Consensus 106 ~~~g~i~i~~~~~~-~------~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~ 178 (368)
..+|.|.++|.... + ......|..+|..+.|-| |...|++++.|.+++.||++..... -...+.||+
T Consensus 71 dE~G~i~l~dt~~~~fr~ee~~lk~~~aH~nAifDl~wap-ge~~lVsasGDsT~r~Wdvk~s~l~-----G~~~~~GH~ 144 (720)
T KOG0321|consen 71 DEDGGIILFDTKSIVFRLEERQLKKPLAHKNAIFDLKWAP-GESLLVSASGDSTIRPWDVKTSRLV-----GGRLNLGHT 144 (720)
T ss_pred cCCCceeeecchhhhcchhhhhhcccccccceeEeeccCC-CceeEEEccCCceeeeeeeccceee-----cceeecccc
Confidence 56899999886532 1 233456999999999999 5589999999999999999987532 123588999
Q ss_pred cceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCC----------------ccccc----eeeeeccccc----E
Q psy4579 179 AVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKEN----------------RVIDA----KTIFTGHTAV----V 234 (368)
Q Consensus 179 ~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~----------------~~~~~----~~~~~~~~~~----v 234 (368)
+.|. +++|.|++...|++|+.||.|.|||++...... ....+ .+....+... |
T Consensus 145 ~Svk---S~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s~ti~ssv 221 (720)
T KOG0321|consen 145 GSVK---SECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAASNTIFSSV 221 (720)
T ss_pred cccc---hhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhccccccccccCceeeee
Confidence 9997 999999989999999999999999998753100 00000 1111223333 4
Q ss_pred eEEEEe-eecccccC-CCCccceEEEEeecCCccc------cc---------ccc-cccC---------CCCCcccccCC
Q psy4579 235 EDYSIH-RLILGTHT-SDEQNHLLIASVQLPNEDA------QF---------DAS-NYDT---------DKGDFGGFGSV 287 (368)
Q Consensus 235 ~~v~~~-~~~~~~~~-~d~~~~~~~~~~~~~~~~~------~~---------~~~-~~d~---------~~~~~~~~~~~ 287 (368)
+.+.|. ...+++++ .|+.+++|.++-....... .+ .+. ..|. .++.+..|++.
T Consensus 222 Tvv~fkDe~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~AsCtD~sIy~ynm~ 301 (720)
T KOG0321|consen 222 TVVLFKDESTLASAGAADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFASCTDNSIYFYNMR 301 (720)
T ss_pred EEEEEeccceeeeccCCCcceEEEeecccccccccCCCcccCccCcccceeeeEEEEecCCCCeEEEEecCCcEEEEecc
Confidence 445553 24444444 5899999976532110000 00 000 0010 11234444444
Q ss_pred CCceeeeee-cCccc--ceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeecccCceeeecceee
Q psy4579 288 SGKIEIEIK-INHEG--EVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYNC 364 (368)
Q Consensus 288 ~~~~~~~~~-~~h~~--~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p~ 364 (368)
+-.+..... .+|.. .-..-..+|++ ..+++|+.|...++|.+... ..+...+.||.-+|++++|.|.
T Consensus 302 s~s~sP~~~~sg~~~~sf~vks~lSpd~-~~l~SgSsd~~ayiw~vs~~---------e~~~~~l~Ght~eVt~V~w~pS 371 (720)
T KOG0321|consen 302 SLSISPVAEFSGKLNSSFYVKSELSPDD-CSLLSGSSDEQAYIWVVSSP---------EAPPALLLGHTREVTTVRWLPS 371 (720)
T ss_pred ccCcCchhhccCcccceeeeeeecCCCC-ceEeccCCCcceeeeeecCc---------cCChhhhhCcceEEEEEeeccc
Confidence 332221111 12211 11233567899 57779999999999999863 3455678899999999999874
|
|
| >KOG1408|consensus | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.1e-16 Score=144.01 Aligned_cols=243 Identities=15% Similarity=0.209 Sum_probs=172.4
Q ss_pred ccCceeeEecCCcccccCCCCccccccCcceeeeccccCCCCC-cEEEEEEec--CCCccccccCCcccCCCCcccCCCC
Q psy4579 40 EWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQN-HLLIASVQL--PNEDAQFDASNYDTDKGGNVQLPNE 116 (368)
Q Consensus 40 ~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~--~~~~~~~~~~~~~~~~~g~i~i~~~ 116 (368)
..-+++++-+|+|++||.|...|++ ++|++..-..+..... ..-|.++.+ |.-..++.+++ +.|-.|+++|.
T Consensus 459 r~G~R~~~vSp~gqhLAsGDr~Gnl--rVy~Lq~l~~~~~~eAHesEilcLeyS~p~~~~kLLASa---srdRlIHV~Dv 533 (1080)
T KOG1408|consen 459 RFGFRALAVSPDGQHLASGDRGGNL--RVYDLQELEYTCFMEAHESEILCLEYSFPVLTNKLLASA---SRDRLIHVYDV 533 (1080)
T ss_pred ccceEEEEECCCcceecccCccCce--EEEEehhhhhhhheecccceeEEEeecCchhhhHhhhhc---cCCceEEEEec
Confidence 4568999999999999999999988 5666654444443222 234666665 55555666666 56889999998
Q ss_pred Cee--eeeccccCCCCceeeEecCCC-CCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccce--ecceeeEEeC
Q psy4579 117 DAQ--FDASNYDTDKGGYGLSWNPSL-NGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVV--EVRYGLSWNP 191 (368)
Q Consensus 117 ~~~--~~~~~~~h~~~v~~l~~sp~~-~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v--~~~~~i~~~p 191 (368)
..+ .+.++.+|...|++++|-..| +..+++++.|+.|.+--..+.. .-..+..|+..+ +..|.++.-|
T Consensus 534 ~rny~l~qtld~HSssITsvKFa~~gln~~MiscGADksimFr~~qk~~-------~g~~f~r~t~t~~ktTlYDm~Vdp 606 (1080)
T KOG1408|consen 534 KRNYDLVQTLDGHSSSITSVKFACNGLNRKMISCGADKSIMFRVNQKAS-------SGRLFPRHTQTLSKTTLYDMAVDP 606 (1080)
T ss_pred ccccchhhhhcccccceeEEEEeecCCceEEEeccCchhhheehhcccc-------CceeccccccccccceEEEeeeCC
Confidence 654 456788999999999998654 4589999999998753332211 113333343322 1347999999
Q ss_pred CCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeec---ccccEeEEEEee--ecccccCCCCccceEEEEeecCCcc
Q psy4579 192 SLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTG---HTAVVEDYSIHR--LILGTHTSDEQNHLLIASVQLPNED 266 (368)
Q Consensus 192 ~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~---~~~~v~~v~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~ 266 (368)
. ..++++++.|..|+|||+..++ ..+.|++ |.+..-.+...| .++++.+.|++
T Consensus 607 ~-~k~v~t~cQDrnirif~i~sgK-------q~k~FKgs~~~eG~lIKv~lDPSgiY~atScsdkt-------------- 664 (1080)
T KOG1408|consen 607 T-SKLVVTVCQDRNIRIFDIESGK-------QVKSFKGSRDHEGDLIKVILDPSGIYLATSCSDKT-------------- 664 (1080)
T ss_pred C-cceEEEEecccceEEEeccccc-------eeeeecccccCCCceEEEEECCCccEEEEeecCCc--------------
Confidence 8 9999999999999999999984 3566665 444444455544 34444444333
Q ss_pred cccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCC
Q psy4579 267 AQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 267 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
+.++|..+|++..++. ||...|+.+.|.+|...+| +.+.||.|.||.+..
T Consensus 665 --------------l~~~Df~sgEcvA~m~-GHsE~VTG~kF~nDCkHlI-SvsgDgCIFvW~lp~ 714 (1080)
T KOG1408|consen 665 --------------LCFVDFVSGECVAQMT-GHSEAVTGVKFLNDCKHLI-SVSGDGCIFVWKLPL 714 (1080)
T ss_pred --------------eEEEEeccchhhhhhc-Ccchheeeeeecccchhhe-eecCCceEEEEECch
Confidence 4445555788888887 9999999999999996555 889999999999854
|
|
| >KOG0650|consensus | Back alignment and domain information |
|---|
Probab=99.71 E-value=5.6e-17 Score=143.21 Aligned_cols=277 Identities=16% Similarity=0.151 Sum_probs=183.8
Q ss_pred cccCceeeEecCCcccccCCCCccccccCcceeeeccccCCCCCcEEEEEEecCC-CccccccCCc--------------
Q psy4579 39 LEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQNHLLIASVQLPN-EDAQFDASNY-------------- 103 (368)
Q Consensus 39 ~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~-------------- 103 (368)
++.-++|+.-.|.|..|++|++||++++ |.+.+|-+...-+-...|.++.|.+ .+..+.+..+
T Consensus 399 Htg~Vr~iSvdp~G~wlasGsdDGtvri--WEi~TgRcvr~~~~d~~I~~vaw~P~~~~~vLAvA~~~~~~ivnp~~G~~ 476 (733)
T KOG0650|consen 399 HTGLVRSISVDPSGEWLASGSDDGTVRI--WEIATGRCVRTVQFDSEIRSVAWNPLSDLCVLAVAVGECVLIVNPIFGDR 476 (733)
T ss_pred cCCeEEEEEecCCcceeeecCCCCcEEE--EEeecceEEEEEeecceeEEEEecCCCCceeEEEEecCceEEeCccccch
Confidence 4556888888999999999999999955 5666666655433223577777733 2222222111
Q ss_pred ---------------ccCCCCcccCCCCCe-----eeeeccccCCCCceeeEecCCCCCeeEEEeCC---CcEEEEeCCC
Q psy4579 104 ---------------DTDKGGNVQLPNEDA-----QFDASNYDTDKGGYGLSWNPSLNGYLLSASDD---HTICLWDINA 160 (368)
Q Consensus 104 ---------------~~~~~g~i~i~~~~~-----~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~d---g~v~iwd~~~ 160 (368)
....++.+..|.... .-+...+.|.+.|..+.|+..| .+|++...+ ..|.|+++..
T Consensus 477 ~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkG-DYlatV~~~~~~~~VliHQLSK 555 (733)
T KOG0650|consen 477 LEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKG-DYLATVMPDSGNKSVLIHQLSK 555 (733)
T ss_pred hhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCC-ceEEEeccCCCcceEEEEeccc
Confidence 113456777887642 1234567799999999999999 999998764 4688999987
Q ss_pred CCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEe
Q psy4579 161 TPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIH 240 (368)
Q Consensus 161 ~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~ 240 (368)
...+ .-|+.-.+.+ .++.|+|. ..+|+.++ ...|+|||+... ..++.+......|..++.+
T Consensus 556 ~~sQ-------~PF~kskG~v---q~v~FHPs-~p~lfVaT-q~~vRiYdL~kq-------elvKkL~tg~kwiS~msih 616 (733)
T KOG0650|consen 556 RKSQ-------SPFRKSKGLV---QRVKFHPS-KPYLFVAT-QRSVRIYDLSKQ-------ELVKKLLTGSKWISSMSIH 616 (733)
T ss_pred cccc-------CchhhcCCce---eEEEecCC-CceEEEEe-ccceEEEehhHH-------HHHHHHhcCCeeeeeeeec
Confidence 6532 2343344455 39999998 66666654 568999999775 2334444444556666665
Q ss_pred eecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEec
Q psy4579 241 RLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKT 320 (368)
Q Consensus 241 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs 320 (368)
+ .+..+.+..+|. .+.-+|+.-+.........|...+++++||+.- .|||+|+
T Consensus 617 p-----------------------~GDnli~gs~d~---k~~WfDldlsskPyk~lr~H~~avr~Va~H~ry-PLfas~s 669 (733)
T KOG0650|consen 617 P-----------------------NGDNLILGSYDK---KMCWFDLDLSSKPYKTLRLHEKAVRSVAFHKRY-PLFASGS 669 (733)
T ss_pred C-----------------------CCCeEEEecCCC---eeEEEEcccCcchhHHhhhhhhhhhhhhhcccc-ceeeeec
Confidence 4 222222222332 244444444444444444799999999999998 5999999
Q ss_pred CCCeEEEEECCCCCCCCCCCCCCCCceeeecccCc----eeeecceeee
Q psy4579 321 PSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKE----GLIEGTYNCY 365 (368)
Q Consensus 321 ~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~----V~~l~w~p~~ 365 (368)
.||++.|+--.-+.+ ..++....|+..+.||... |..+.|||..
T Consensus 670 dDgtv~Vfhg~VY~D-l~qnpliVPlK~L~gH~~~~~~gVLd~~wHP~q 717 (733)
T KOG0650|consen 670 DDGTVIVFHGMVYND-LLQNPLIVPLKRLRGHEKTNDLGVLDTIWHPRQ 717 (733)
T ss_pred CCCcEEEEeeeeehh-hhcCCceEeeeeccCceeecccceEeecccCCC
Confidence 999999997543222 1233446788899999877 8999999975
|
|
| >KOG1007|consensus | Back alignment and domain information |
|---|
Probab=99.71 E-value=3.5e-16 Score=126.71 Aligned_cols=197 Identities=17% Similarity=0.202 Sum_probs=137.2
Q ss_pred CCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeC-CCCCeEEEeeCCCc
Q psy4579 127 TDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNP-SLNGYLLSASDDHT 205 (368)
Q Consensus 127 h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p-~~~~~l~s~s~dg~ 205 (368)
+-+.|.|+.|.|++ ..+|+-. |..|.+|++........... ...-.+|+...+ +-+|+| -+++.+++. .|++
T Consensus 122 avg~i~cvew~Pns-~klasm~-dn~i~l~~l~ess~~vaev~-ss~s~e~~~~ft---sg~WspHHdgnqv~tt-~d~t 194 (370)
T KOG1007|consen 122 AVGKINCVEWEPNS-DKLASMD-DNNIVLWSLDESSKIVAEVL-SSESAEMRHSFT---SGAWSPHHDGNQVATT-SDST 194 (370)
T ss_pred HhCceeeEEEcCCC-CeeEEec-cCceEEEEcccCcchheeec-ccccccccceec---ccccCCCCccceEEEe-CCCc
Confidence 55689999999998 7777765 89999999987754211111 111112455554 889999 336666664 5899
Q ss_pred EEEEECCCCCCCCccccceeeeecccccEeEEEEee---ecccccCCCCccceEEEEeecCCcccccccccccCCCCCcc
Q psy4579 206 ICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR---LILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFG 282 (368)
Q Consensus 206 i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~---~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 282 (368)
+..||+|+..+. ...-.+|...|.+++|+| .++++++.|+.+++|..+
T Consensus 195 l~~~D~RT~~~~------~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R----------------------- 245 (370)
T KOG1007|consen 195 LQFWDLRTMKKN------NSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTR----------------------- 245 (370)
T ss_pred EEEEEccchhhh------cchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEecc-----------------------
Confidence 999999987432 223346888999999997 567777777766665443
Q ss_pred cccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCC---------C-----CCCC-----
Q psy4579 283 GFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPD---------P-----NGEC----- 343 (368)
Q Consensus 283 ~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~---------~-----~~~~----- 343 (368)
..+.......+|...|.++.|+|..+.+|.|||.|..|.+|........+. . ..+.
T Consensus 246 -----~tk~pv~el~~HsHWvW~VRfn~~hdqLiLs~~SDs~V~Lsca~svSSE~qi~~~~dese~e~~dseer~kpL~d 320 (370)
T KOG1007|consen 246 -----KTKFPVQELPGHSHWVWAVRFNPEHDQLILSGGSDSAVNLSCASSVSSEQQIEFEDDESESEDEDSEERVKPLQD 320 (370)
T ss_pred -----CCCccccccCCCceEEEEEEecCccceEEEecCCCceeEEEeccccccccccccccccccCcchhhHHhcccccc
Confidence 233333334489999999999999889999999999999998765442211 0 0111
Q ss_pred CCceeeecccCceeeecceee
Q psy4579 344 HPDLRLRGHQKEGLIEGTYNC 364 (368)
Q Consensus 344 ~~~~~~~gh~~~V~~l~w~p~ 364 (368)
-.+.++..|.+.||+++||..
T Consensus 321 g~l~tydehEDSVY~~aWSsa 341 (370)
T KOG1007|consen 321 GQLETYDEHEDSVYALAWSSA 341 (370)
T ss_pred cccccccccccceEEEeeccC
Confidence 112356789999999999853
|
|
| >KOG0639|consensus | Back alignment and domain information |
|---|
Probab=99.71 E-value=2.1e-16 Score=136.91 Aligned_cols=226 Identities=17% Similarity=0.189 Sum_probs=160.5
Q ss_pred EEEEEEecCCCccccccCCcccCCCCcccCCCCCeeeee------ccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEe
Q psy4579 84 LLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQFDA------SNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWD 157 (368)
Q Consensus 84 ~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~------~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd 157 (368)
.+|..++++.....+... +.|.|+||++.+.... -.......|.++...|+| +.|++|+.-.++.|||
T Consensus 420 EvVcAvtIS~~trhVyTg-----GkgcVKVWdis~pg~k~PvsqLdcl~rdnyiRSckL~pdg-rtLivGGeastlsiWD 493 (705)
T KOG0639|consen 420 EVVCAVTISNPTRHVYTG-----GKGCVKVWDISQPGNKSPVSQLDCLNRDNYIRSCKLLPDG-RTLIVGGEASTLSIWD 493 (705)
T ss_pred cEEEEEEecCCcceeEec-----CCCeEEEeeccCCCCCCccccccccCcccceeeeEecCCC-ceEEeccccceeeeee
Confidence 356666666555544443 4899999998753221 223456789999999999 9999999999999999
Q ss_pred CCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEE
Q psy4579 158 INATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDY 237 (368)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v 237 (368)
+...... ....+. ...+.+ ++++.+|| .+...++..||.|.|||+++. ..++.|+||++.+.|+
T Consensus 494 LAapTpr-----ikaelt-ssapaC--yALa~spD-akvcFsccsdGnI~vwDLhnq-------~~VrqfqGhtDGascI 557 (705)
T KOG0639|consen 494 LAAPTPR-----IKAELT-SSAPAC--YALAISPD-AKVCFSCCSDGNIAVWDLHNQ-------TLVRQFQGHTDGASCI 557 (705)
T ss_pred ccCCCcc-----hhhhcC-Ccchhh--hhhhcCCc-cceeeeeccCCcEEEEEcccc-------eeeecccCCCCCceeE
Confidence 9875321 111122 122333 79999999 999999999999999999987 5688999999999999
Q ss_pred EEe--eecccccCCCCccceEEEEeecCCccccccccccc---CCCCCcccccCCCCceeee--------eecCccccee
Q psy4579 238 SIH--RLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYD---TDKGDFGGFGSVSGKIEIE--------IKINHEGEVN 304 (368)
Q Consensus 238 ~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d---~~~~~~~~~~~~~~~~~~~--------~~~~h~~~i~ 304 (368)
..+ ...+-+++-|.+++.|..+-......-.|....+. ..++.+...++.++.+... ....|..-|.
T Consensus 558 dis~dGtklWTGGlDntvRcWDlregrqlqqhdF~SQIfSLg~cP~~dWlavGMens~vevlh~skp~kyqlhlheScVL 637 (705)
T KOG0639|consen 558 DISKDGTKLWTGGLDNTVRCWDLREGRQLQQHDFSSQIFSLGYCPTGDWLAVGMENSNVEVLHTSKPEKYQLHLHESCVL 637 (705)
T ss_pred EecCCCceeecCCCccceeehhhhhhhhhhhhhhhhhheecccCCCccceeeecccCcEEEEecCCccceeecccccEEE
Confidence 998 46778888888888886653322222222222221 2345666666665554332 1125888999
Q ss_pred EEEEeCCCCcEEEEecCCCeEEEEECCC
Q psy4579 305 RARYMPQNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 305 ~~~~~p~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
++.|.+.| ..+++.+.|..+..|...-
T Consensus 638 SlKFa~cG-kwfvStGkDnlLnawrtPy 664 (705)
T KOG0639|consen 638 SLKFAYCG-KWFVSTGKDNLLNAWRTPY 664 (705)
T ss_pred EEEecccC-ceeeecCchhhhhhccCcc
Confidence 99999999 6777889999999998753
|
|
| >KOG1036|consensus | Back alignment and domain information |
|---|
Probab=99.71 E-value=4.7e-16 Score=127.10 Aligned_cols=154 Identities=15% Similarity=0.223 Sum_probs=113.8
Q ss_pred cCceeeEecCCcccccCCCCccccccCcceeeeccccCCCCCcEEEEEEecCCCccccccCCcccCCCCcccCCCCCeee
Q psy4579 41 WPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQF 120 (368)
Q Consensus 41 ~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~ 120 (368)
-.+.+++|+|.+..|+.++.||.++ .|+...............+.++.|-..... +..+-||.|+.+|+++..
T Consensus 14 d~IS~v~f~~~~~~LLvssWDgslr--lYdv~~~~l~~~~~~~~plL~c~F~d~~~~-----~~G~~dg~vr~~Dln~~~ 86 (323)
T KOG1036|consen 14 DGISSVKFSPSSSDLLVSSWDGSLR--LYDVPANSLKLKFKHGAPLLDCAFADESTI-----VTGGLDGQVRRYDLNTGN 86 (323)
T ss_pred hceeeEEEcCcCCcEEEEeccCcEE--EEeccchhhhhheecCCceeeeeccCCceE-----EEeccCceEEEEEecCCc
Confidence 3488999999999999999999984 444443322222223345666666543322 233459999999999988
Q ss_pred eeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEe
Q psy4579 121 DASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSA 200 (368)
Q Consensus 121 ~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~ 200 (368)
...+..|.++|.|+.+++.. ..+++||.|++|++||.+... ....+. ....| +++..+ ++.|+.|
T Consensus 87 ~~~igth~~~i~ci~~~~~~-~~vIsgsWD~~ik~wD~R~~~-------~~~~~d-~~kkV---y~~~v~---g~~LvVg 151 (323)
T KOG1036|consen 87 EDQIGTHDEGIRCIEYSYEV-GCVISGSWDKTIKFWDPRNKV-------VVGTFD-QGKKV---YCMDVS---GNRLVVG 151 (323)
T ss_pred ceeeccCCCceEEEEeeccC-CeEEEcccCccEEEEeccccc-------cccccc-cCceE---EEEecc---CCEEEEe
Confidence 88899999999999999987 899999999999999998632 112222 22355 577654 7889999
Q ss_pred eCCCcEEEEECCCCCC
Q psy4579 201 SDDHTICLWDINATPK 216 (368)
Q Consensus 201 s~dg~i~iwd~~~~~~ 216 (368)
..|..|.+||+|+...
T Consensus 152 ~~~r~v~iyDLRn~~~ 167 (323)
T KOG1036|consen 152 TSDRKVLIYDLRNLDE 167 (323)
T ss_pred ecCceEEEEEcccccc
Confidence 9999999999998643
|
|
| >KOG0646|consensus | Back alignment and domain information |
|---|
Probab=99.70 E-value=4.9e-17 Score=139.57 Aligned_cols=211 Identities=14% Similarity=0.197 Sum_probs=162.5
Q ss_pred hhhhhhhhhhcCcchheeecccccccCceeeEecCCcccccCCCCccccccCcceeeec-ccc-C-----C-CCCcEEEE
Q psy4579 16 INEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKG-THT-S-----D-EQNHLLIA 87 (368)
Q Consensus 16 ~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~-~~~-~-----~-~~~~~~i~ 87 (368)
+.+..++|..+++.+...+..|. -++.|++|+-|+.++++||.||.|.+|..-.... ... . . ....+.|.
T Consensus 101 i~g~lYlWelssG~LL~v~~aHY--Q~ITcL~fs~dgs~iiTgskDg~V~vW~l~~lv~a~~~~~~~p~~~f~~HtlsIT 178 (476)
T KOG0646|consen 101 ISGNLYLWELSSGILLNVLSAHY--QSITCLKFSDDGSHIITGSKDGAVLVWLLTDLVSADNDHSVKPLHIFSDHTLSIT 178 (476)
T ss_pred ccCcEEEEEeccccHHHHHHhhc--cceeEEEEeCCCcEEEecCCCccEEEEEEEeecccccCCCccceeeeccCcceeE
Confidence 56677899999999998886553 4899999999999999999999997765322211 111 0 0 12345688
Q ss_pred EEecCCCccccccCCcccCCCCcccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCC--
Q psy4579 88 SVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKEN-- 165 (368)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~-- 165 (368)
++.+.... ..+--|..+.|.++++|++....+.........+.+++.+|.. ..+..|+.+|.|.+.++.+...+.
T Consensus 179 Dl~ig~Gg--~~~rl~TaS~D~t~k~wdlS~g~LLlti~fp~si~av~lDpae-~~~yiGt~~G~I~~~~~~~~~~~~~~ 255 (476)
T KOG0646|consen 179 DLQIGSGG--TNARLYTASEDRTIKLWDLSLGVLLLTITFPSSIKAVALDPAE-RVVYIGTEEGKIFQNLLFKLSGQSAG 255 (476)
T ss_pred EEEecCCC--ccceEEEecCCceEEEEEeccceeeEEEecCCcceeEEEcccc-cEEEecCCcceEEeeehhcCCccccc
Confidence 87775432 3344455678999999999987777777788999999999998 999999999999999887654211
Q ss_pred -------cccccceeeecccc--ceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeE
Q psy4579 166 -------RVIDAKTIFTGHTA--VVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVED 236 (368)
Q Consensus 166 -------~~~~~~~~~~~h~~--~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~ 236 (368)
........+.||.+ .|+ |++.+-| +.+|++|+.||.|+|||+... ++++++....++|+.
T Consensus 256 v~~k~~~~~~t~~~~~~Gh~~~~~IT---cLais~D-gtlLlSGd~dg~VcvWdi~S~-------Q~iRtl~~~kgpVtn 324 (476)
T KOG0646|consen 256 VNQKGRHEENTQINVLVGHENESAIT---CLAISTD-GTLLLSGDEDGKVCVWDIYSK-------QCIRTLQTSKGPVTN 324 (476)
T ss_pred ccccccccccceeeeeccccCCccee---EEEEecC-ccEEEeeCCCCCEEEEecchH-------HHHHHHhhhccccce
Confidence 11234567889998 887 9999998 999999999999999999886 456666656778888
Q ss_pred EEEeee
Q psy4579 237 YSIHRL 242 (368)
Q Consensus 237 v~~~~~ 242 (368)
+.++|+
T Consensus 325 L~i~~~ 330 (476)
T KOG0646|consen 325 LQINPL 330 (476)
T ss_pred eEeecc
Confidence 888653
|
|
| >KOG1009|consensus | Back alignment and domain information |
|---|
Probab=99.70 E-value=7.4e-16 Score=130.26 Aligned_cols=152 Identities=19% Similarity=0.363 Sum_probs=113.7
Q ss_pred cCceeeEecCCcc-cccCCCCccccccCcceeeeccccCCCCCcEEEEEEecCCCccccccCCcccCCCCcccCCCCCee
Q psy4579 41 WPSLTAQWLPDVT-SVQLPNEDAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQ 119 (368)
Q Consensus 41 ~~~~~~~~~p~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~ 119 (368)
-|+.++.|.++.. ++++|+.|..+++|.. ..+. |.. ++++| .
T Consensus 14 ~pv~s~dfq~n~~~~laT~G~D~~iriW~v--~r~~----------------~~~------------~~~~V-------~ 56 (434)
T KOG1009|consen 14 EPVYSVDFQKNSLNKLATAGGDKDIRIWKV--NRSE----------------PGG------------GDMKV-------E 56 (434)
T ss_pred CceEEEEeccCcccceecccCccceeeeee--eecC----------------CCC------------CceeE-------E
Confidence 4889999999877 9999999988876632 1110 000 01111 3
Q ss_pred eeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCC---------CCcccccceeeeccccceecceeeEEe
Q psy4579 120 FDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPK---------ENRVIDAKTIFTGHTAVVEVRYGLSWN 190 (368)
Q Consensus 120 ~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~---------~~~~~~~~~~~~~h~~~v~~~~~i~~~ 190 (368)
....+..|.++|++++|+|+| .+||+|+.+|.|.+|....-.. ..+.....+.+.+|...+ |.++|+
T Consensus 57 y~s~Ls~H~~aVN~vRf~p~g-elLASg~D~g~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~di---ydL~Ws 132 (434)
T KOG1009|consen 57 YLSSLSRHTRAVNVVRFSPDG-ELLASGGDGGEVFLWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDI---YDLAWS 132 (434)
T ss_pred EeecccCCcceeEEEEEcCCc-CeeeecCCCceEEEEEecCcCCccccchhhhCccceEEEEEecccccch---hhhhcc
Confidence 345567799999999999999 9999999999999998762110 011123446788899988 799999
Q ss_pred CCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee
Q psy4579 191 PSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR 241 (368)
Q Consensus 191 p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~ 241 (368)
|+ +.++++++-|.++++||+..+ .....+..|...+.-++|.|
T Consensus 133 ~d-~~~l~s~s~dns~~l~Dv~~G-------~l~~~~~dh~~yvqgvawDp 175 (434)
T KOG1009|consen 133 PD-SNFLVSGSVDNSVRLWDVHAG-------QLLAILDDHEHYVQGVAWDP 175 (434)
T ss_pred CC-CceeeeeeccceEEEEEeccc-------eeEeeccccccccceeecch
Confidence 99 999999999999999999998 34566667877888788765
|
|
| >KOG1188|consensus | Back alignment and domain information |
|---|
Probab=99.70 E-value=2e-16 Score=130.97 Aligned_cols=177 Identities=18% Similarity=0.244 Sum_probs=122.4
Q ss_pred CeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCC-CCCeEEEeeCCCcEEEEECCCCCCCCcc
Q psy4579 142 GYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPS-LNGYLLSASDDHTICLWDINATPKENRV 220 (368)
Q Consensus 142 ~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~-~~~~l~s~s~dg~i~iwd~~~~~~~~~~ 220 (368)
..+|++...|+|++||..+++ ....+++|...+. .+.|... ..+.+.+|+.||+|++||+|...+.
T Consensus 41 ~~vav~lSngsv~lyd~~tg~-------~l~~fk~~~~~~N---~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~--- 107 (376)
T KOG1188|consen 41 TAVAVSLSNGSVRLYDKGTGQ-------LLEEFKGPPATTN---GVRFISCDSPHGVISCSSDGTVRLWDIRSQAES--- 107 (376)
T ss_pred eeEEEEecCCeEEEEeccchh-------hhheecCCCCccc---ceEEecCCCCCeeEEeccCCeEEEEEeecchhh---
Confidence 578889999999999999865 5678899988886 8888763 4778999999999999999987542
Q ss_pred ccceeeeeccc-ccEeEEEEe--eecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCce-eeeee
Q psy4579 221 IDAKTIFTGHT-AVVEDYSIH--RLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKI-EIEIK 296 (368)
Q Consensus 221 ~~~~~~~~~~~-~~v~~v~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~~~~ 296 (368)
+...+.++. .+..+++.+ ..+++++... ... ...+.+||.+..+. ...+.
T Consensus 108 --a~~~~~~~~~~~f~~ld~nck~~ii~~GtE~--------------~~s----------~A~v~lwDvR~~qq~l~~~~ 161 (376)
T KOG1188|consen 108 --ARISWTQQSGTPFICLDLNCKKNIIACGTEL--------------TRS----------DASVVLWDVRSEQQLLRQLN 161 (376)
T ss_pred --hheeccCCCCCcceEeeccCcCCeEEecccc--------------ccC----------ceEEEEEEeccccchhhhhh
Confidence 233444554 445555553 2233222110 000 01123333333333 33334
Q ss_pred cCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeecccCceeeecceee
Q psy4579 297 INHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYNC 364 (368)
Q Consensus 297 ~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p~ 364 (368)
..|...|+++.|+|..+++|+|||.||.|.|||+.... +...+.....|...|-.+.|...
T Consensus 162 eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~~d~-------EeDaL~~viN~~sSI~~igw~~~ 222 (376)
T KOG1188|consen 162 ESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTKKDN-------EEDALLHVINHGSSIHLIGWLSK 222 (376)
T ss_pred hhccCcceeEEecCCCCCeEEeecccceEEeeecCCCc-------chhhHHHhhcccceeeeeeeecC
Confidence 48999999999999999999999999999999998642 23334445567778888888744
|
|
| >KOG0290|consensus | Back alignment and domain information |
|---|
Probab=99.69 E-value=2.4e-16 Score=127.81 Aligned_cols=224 Identities=20% Similarity=0.258 Sum_probs=157.3
Q ss_pred cccCCcccCCCCcccCCCCC--e--eeeeccccCCCCceeeEecCCC----CCeeEEEeCCCcEEEEeCCCCCCCCcccc
Q psy4579 98 FDASNYDTDKGGNVQLPNED--A--QFDASNYDTDKGGYGLSWNPSL----NGYLLSASDDHTICLWDINATPKENRVID 169 (368)
Q Consensus 98 ~~~~~~~~~~~g~i~i~~~~--~--~~~~~~~~h~~~v~~l~~sp~~----~~~lasg~~dg~v~iwd~~~~~~~~~~~~ 169 (368)
+..+.|.....++|.|-.++ + -.....+.|.-+++.+.|.|+. |++|||.+ ..+|+|.+...........
T Consensus 62 la~gS~~Ee~~Nkvqiv~ld~~s~e~~~~a~fd~~YP~tK~~wiPd~~g~~pdlLATs~--D~LRlWri~~ee~~~~~~~ 139 (364)
T KOG0290|consen 62 LAVGSFIEEYNNKVQIVQLDEDSGELVEDANFDHPYPVTKLMWIPDSKGVYPDLLATSS--DFLRLWRIGDEESRVELQS 139 (364)
T ss_pred EEEeeeccccCCeeEEEEEccCCCceeccCCCCCCCCccceEecCCccccCcchhhccc--CeEEEEeccCcCCceehhh
Confidence 33344444555666664432 1 2233457899999999999976 45787765 4899999874322111000
Q ss_pred --cceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee---ecc
Q psy4579 170 --AKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR---LIL 244 (368)
Q Consensus 170 --~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~---~~~ 244 (368)
....-..+..+++ +..|+.-+.+++.++|-|-++.|||++++... .....+-+|...|.+++|.. .++
T Consensus 140 ~L~~~kns~~~aPlT---SFDWne~dp~~igtSSiDTTCTiWdie~~~~~----~vkTQLIAHDKEV~DIaf~~~s~~~F 212 (364)
T KOG0290|consen 140 VLNNNKNSEFCAPLT---SFDWNEVDPNLIGTSSIDTTCTIWDIETGVSG----TVKTQLIAHDKEVYDIAFLKGSRDVF 212 (364)
T ss_pred hhccCcccccCCccc---ccccccCCcceeEeecccCeEEEEEEeecccc----ceeeEEEecCcceeEEEeccCccceE
Confidence 1112334667886 99999888999999999999999999986210 12445677999999999975 677
Q ss_pred cccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCC-
Q psy4579 245 GTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSS- 323 (368)
Q Consensus 245 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg- 323 (368)
++.+.|+.++++..+- .... .++.+-. .-..+...++|++..++++||-..|.
T Consensus 213 ASvgaDGSvRmFDLR~------leHS-------------------TIIYE~p-~~~~pLlRLswnkqDpnymATf~~dS~ 266 (364)
T KOG0290|consen 213 ASVGADGSVRMFDLRS------LEHS-------------------TIIYEDP-SPSTPLLRLSWNKQDPNYMATFAMDSN 266 (364)
T ss_pred EEecCCCcEEEEEecc------cccc-------------------eEEecCC-CCCCcceeeccCcCCchHHhhhhcCCc
Confidence 8888888777765541 0111 1111111 22567889999999999999988776
Q ss_pred eEEEEECCCCCCCCCCCCCCCCceeeecccCceeeecceeee
Q psy4579 324 DVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 324 ~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p~~ 365 (368)
.|.|-|+|.. +.++..|.+|++.|++++|.|..
T Consensus 267 ~V~iLDiR~P---------~tpva~L~~H~a~VNgIaWaPhS 299 (364)
T KOG0290|consen 267 KVVILDIRVP---------CTPVARLRNHQASVNGIAWAPHS 299 (364)
T ss_pred eEEEEEecCC---------CcceehhhcCcccccceEecCCC
Confidence 5999999953 78889999999999999999975
|
|
| >KOG1063|consensus | Back alignment and domain information |
|---|
Probab=99.69 E-value=6.6e-16 Score=138.65 Aligned_cols=277 Identities=17% Similarity=0.179 Sum_probs=186.0
Q ss_pred ccCceeeEecCCcccccCCCCccccccCcceeeeccccC-----CCC-CcEEEEEEecCCCccccccCCcccCCCCcccC
Q psy4579 40 EWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTS-----DEQ-NHLLIASVQLPNEDAQFDASNYDTDKGGNVQL 113 (368)
Q Consensus 40 ~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i 113 (368)
+| |.++.|+|.+..|.++|.|.+.++|.-+..+|.=.. ++. +-.-.....|.++...+.+.+ ..|..++
T Consensus 268 DW-V~sv~W~p~~~~LLSASaDksmiiW~pd~~tGiWv~~vRlGe~gg~a~GF~g~lw~~n~~~ii~~g----~~Gg~hl 342 (764)
T KOG1063|consen 268 DW-VYSVWWHPEGLDLLSASADKSMIIWKPDENTGIWVDVVRLGEVGGSAGGFWGGLWSPNSNVIIAHG----RTGGFHL 342 (764)
T ss_pred cc-eEEEEEccchhhheecccCcceEEEecCCccceEEEEEEeecccccccceeeEEEcCCCCEEEEec----ccCcEEE
Confidence 45 778999999999999999999988865544332111 111 111123333433333344444 4578889
Q ss_pred CCCCe----eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCC--------------------C----
Q psy4579 114 PNEDA----QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKE--------------------N---- 165 (368)
Q Consensus 114 ~~~~~----~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~--------------------~---- 165 (368)
|.... .......+|-+.|.+++|.|.| .+|++.|.|.+-|+|-.-..+.. .
T Consensus 343 Wkt~d~~~w~~~~~iSGH~~~V~dv~W~psG-eflLsvs~DQTTRlFa~wg~q~~wHEiaRPQiHGyDl~c~~~vn~~~~ 421 (764)
T KOG1063|consen 343 WKTKDKTFWTQEPVISGHVDGVKDVDWDPSG-EFLLSVSLDQTTRLFARWGRQQEWHEIARPQIHGYDLTCLSFVNEDLQ 421 (764)
T ss_pred EeccCccceeeccccccccccceeeeecCCC-CEEEEeccccceeeecccccccceeeecccccccccceeeehccCCce
Confidence 98322 2234467899999999999999 89999999999998754411000 0
Q ss_pred -------c------------------------------------------------------------------------
Q psy4579 166 -------R------------------------------------------------------------------------ 166 (368)
Q Consensus 166 -------~------------------------------------------------------------------------ 166 (368)
+
T Consensus 422 FVSgAdEKVlRvF~aPk~fv~~l~~i~g~~~~~~~~~p~gA~VpaLGLSnKa~~~~e~~~G~~~~~~~et~~~~~p~~L~ 501 (764)
T KOG1063|consen 422 FVSGADEKVLRVFEAPKSFVKSLMAICGKCFKGSDELPDGANVPALGLSNKAFFPGETNTGGEAAVCAETPLAAAPCELT 501 (764)
T ss_pred eeecccceeeeeecCcHHHHHHHHHHhCccccCchhcccccccccccccCCCCcccccccccccceeeecccccCchhcc
Confidence 0
Q ss_pred ------------ccccceeeeccccceecceeeEEeCCCCCeEEEeeCCC-----cEEEEECCCCCCCCccccceeeeec
Q psy4579 167 ------------VIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDH-----TICLWDINATPKENRVIDAKTIFTG 229 (368)
Q Consensus 167 ------------~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg-----~i~iwd~~~~~~~~~~~~~~~~~~~ 229 (368)
.....+.+.||...| ++++.+|+ ++++||++... -|++|+..+- .....+.+
T Consensus 502 ePP~EdqLq~~tLwPEv~KLYGHGyEv---~~l~~s~~-gnliASaCKS~~~ehAvI~lw~t~~W-------~~~~~L~~ 570 (764)
T KOG1063|consen 502 EPPTEDQLQQNTLWPEVHKLYGHGYEV---YALAISPT-GNLIASACKSSLKEHAVIRLWNTANW-------LQVQELEG 570 (764)
T ss_pred CCChHHHHHHhccchhhHHhccCceeE---EEEEecCC-CCEEeehhhhCCccceEEEEEeccch-------hhhheecc
Confidence 000334667899999 59999999 99999998654 5899998775 33457889
Q ss_pred ccccEeEEEEee--ecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEE
Q psy4579 230 HTAVVEDYSIHR--LILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRAR 307 (368)
Q Consensus 230 ~~~~v~~v~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~ 307 (368)
|.-.|+.++|+| .++.+.+.|....+|-..-. . ...........|+.-|.++.
T Consensus 571 HsLTVT~l~FSpdg~~LLsvsRDRt~sl~~~~~~---------------~----------~~e~~fa~~k~HtRIIWdcs 625 (764)
T KOG1063|consen 571 HSLTVTRLAFSPDGRYLLSVSRDRTVSLYEVQED---------------I----------KDEFRFACLKAHTRIIWDCS 625 (764)
T ss_pred cceEEEEEEECCCCcEEEEeecCceEEeeeeecc---------------c----------chhhhhccccccceEEEEcc
Confidence 999999999997 45566666655555432100 0 01111112237999999999
Q ss_pred EeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeecccCceeeecceeee
Q psy4579 308 YMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 308 ~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p~~ 365 (368)
|+|++ ..|||+|.|++|++|.......+ ..+......+..+|++++|.|-.
T Consensus 626 W~pde-~~FaTaSRDK~VkVW~~~~~~d~------~i~~~a~~~~~~aVTAv~~~~~~ 676 (764)
T KOG1063|consen 626 WSPDE-KYFATASRDKKVKVWEEPDLRDK------YISRFACLKFSLAVTAVAYLPVD 676 (764)
T ss_pred cCccc-ceeEEecCCceEEEEeccCchhh------hhhhhchhccCCceeeEEeeccc
Confidence 99999 56999999999999999763211 22222334688899999998753
|
|
| >KOG1063|consensus | Back alignment and domain information |
|---|
Probab=99.67 E-value=3e-15 Score=134.51 Aligned_cols=182 Identities=14% Similarity=0.136 Sum_probs=121.4
Q ss_pred ceeeEecCCc---ccccCCCCccccccCcceeeeccc-----------------------cC-----C--CCCcEEEEEE
Q psy4579 43 SLTAQWLPDV---TSVQLPNEDAQFDASNYDTDKGTH-----------------------TS-----D--EQNHLLIASV 89 (368)
Q Consensus 43 ~~~~~~~p~~---~~l~~~~~~~~~~~~~~~~~~~~~-----------------------~~-----~--~~~~~~i~~~ 89 (368)
+.+++|..-+ -+|+++|+|..|++|...+...+. .+ . +....+|.++
T Consensus 194 Irsl~f~~~~~~~~~laS~SQD~yIRiW~i~~~~~~~~~~~e~~~t~~~~~~~f~~l~~i~~~is~eall~GHeDWV~sv 273 (764)
T KOG1063|consen 194 IRSLAFARLGGDDLLLASSSQDRYIRIWRIVLGDDEDSNEREDSLTTLSNLPVFMILEEIQYRISFEALLMGHEDWVYSV 273 (764)
T ss_pred hhhhhhhccCCCcEEEEecCCceEEEEEEEEecCCccccccccccccccCCceeeeeeeEEEEEehhhhhcCcccceEEE
Confidence 6677776443 478999999999777544332000 00 0 1234567777
Q ss_pred ecCCCccccccCCcccCCCCcccCCCCCee--------eeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCC
Q psy4579 90 QLPNEDAQFDASNYDTDKGGNVQLPNEDAQ--------FDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINAT 161 (368)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~--------~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~ 161 (368)
.|.+....+.++ +.|.++.+|..+.. .+....+.....+..-|+|++ +.+++-+..|-.++|.....
T Consensus 274 ~W~p~~~~LLSA----SaDksmiiW~pd~~tGiWv~~vRlGe~gg~a~GF~g~lw~~n~-~~ii~~g~~Gg~hlWkt~d~ 348 (764)
T KOG1063|consen 274 WWHPEGLDLLSA----SADKSMIIWKPDENTGIWVDVVRLGEVGGSAGGFWGGLWSPNS-NVIIAHGRTGGFHLWKTKDK 348 (764)
T ss_pred EEccchhhheec----ccCcceEEEecCCccceEEEEEEeecccccccceeeEEEcCCC-CEEEEecccCcEEEEeccCc
Confidence 776555333333 35899999987654 112223345568899999998 89999999999999983221
Q ss_pred CCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEe
Q psy4579 162 PKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIH 240 (368)
Q Consensus 162 ~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~ 240 (368)
....+.....||.+.|+ +++|.|. +.+|+|.|.|.+-+++-.-..+. .+-.+...+-|...++|+++-
T Consensus 349 ----~~w~~~~~iSGH~~~V~---dv~W~ps-GeflLsvs~DQTTRlFa~wg~q~---~wHEiaRPQiHGyDl~c~~~v 416 (764)
T KOG1063|consen 349 ----TFWTQEPVISGHVDGVK---DVDWDPS-GEFLLSVSLDQTTRLFARWGRQQ---EWHEIARPQIHGYDLTCLSFV 416 (764)
T ss_pred ----cceeeccccccccccce---eeeecCC-CCEEEEeccccceeeeccccccc---ceeeecccccccccceeeehc
Confidence 11123456789999997 9999999 89999999999999997552211 133334445577777777773
|
|
| >KOG4378|consensus | Back alignment and domain information |
|---|
Probab=99.67 E-value=4.4e-16 Score=134.82 Aligned_cols=203 Identities=13% Similarity=0.172 Sum_probs=160.5
Q ss_pred hhhhhhhhhhcCcchheeecccccccCceeeEecCCcccccCCCCccccccCcceeeeccccCCCCCcEEEEEEecCCCc
Q psy4579 16 INEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNED 95 (368)
Q Consensus 16 ~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 95 (368)
....+|||+.....+-+.+..|. -.|++|.|.-...++|.++..|.+++........+.+.+..+...+.-+.+....
T Consensus 99 ~~~~Vkiwdl~~kl~hr~lkdh~--stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~tt~f~~~sgqsvRll~ys~sk 176 (673)
T KOG4378|consen 99 QSGCVKIWDLRAKLIHRFLKDHQ--STVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKTTTFTIDSGQSVRLLRYSPSK 176 (673)
T ss_pred cCceeeehhhHHHHHhhhccCCc--ceeEEEEecCCcceeEEeccCCcEEEEecccCccccceecCCCCeEEEeeccccc
Confidence 45678999999877877777765 5799999999999999999999998776655544444455555666667775544
Q ss_pred cccccCCcccCCCCcccCCCCCeee--eeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCccccccee
Q psy4579 96 AQFDASNYDTDKGGNVQLPNEDAQF--DASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTI 173 (368)
Q Consensus 96 ~~~~~~~~~~~~~g~i~i~~~~~~~--~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~ 173 (368)
..+.... +.+|.|.+||..+.. ......|..+...|+|+|..+.+|++.+.|..|.+||+..... ...
T Consensus 177 r~lL~~a---sd~G~VtlwDv~g~sp~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s~~s-------~~~ 246 (673)
T KOG4378|consen 177 RFLLSIA---SDKGAVTLWDVQGMSPIFHASEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIRSQAS-------TDR 246 (673)
T ss_pred ceeeEee---ccCCeEEEEeccCCCcccchhhhccCCcCcceecCCccceEEEecccceEEEeecccccc-------cce
Confidence 4444333 358999999998754 3455679999999999999989999999999999999986542 222
Q ss_pred eeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee
Q psy4579 174 FTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR 241 (368)
Q Consensus 174 ~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~ 241 (368)
+. ...+.+ +++|.++ +.+|+.|+..|.|..||+|..+ .|+.....|...|.+++|.+
T Consensus 247 l~-y~~Pls---tvaf~~~-G~~L~aG~s~G~~i~YD~R~~k------~Pv~v~sah~~sVt~vafq~ 303 (673)
T KOG4378|consen 247 LT-YSHPLS---TVAFSEC-GTYLCAGNSKGELIAYDMRSTK------APVAVRSAHDASVTRVAFQP 303 (673)
T ss_pred ee-ecCCcc---eeeecCC-ceEEEeecCCceEEEEecccCC------CCceEeeecccceeEEEeee
Confidence 22 334564 9999998 9999999999999999999875 56788889999999999975
|
|
| >KOG0642|consensus | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.3e-15 Score=133.85 Aligned_cols=206 Identities=17% Similarity=0.197 Sum_probs=136.9
Q ss_pred CCCCcccCCCCCe---------eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcc---ccccee
Q psy4579 106 DKGGNVQLPNEDA---------QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRV---IDAKTI 173 (368)
Q Consensus 106 ~~~g~i~i~~~~~---------~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~---~~~~~~ 173 (368)
+.+|.+++|++.. ..+.++.+|.++|.|++..+++ ..+.+|+.||+|+.|++......... ......
T Consensus 313 sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~-~~~ysgg~Dg~I~~w~~p~n~dp~ds~dp~vl~~~ 391 (577)
T KOG0642|consen 313 SEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNG-EHCYSGGIDGTIRCWNLPPNQDPDDSYDPSVLSGT 391 (577)
T ss_pred ccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCc-eEEEeeccCceeeeeccCCCCCcccccCcchhccc
Confidence 4689999999821 3466789999999999999999 99999999999999977632211111 124467
Q ss_pred eeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeeccc--ccEeEEEEe---e-------
Q psy4579 174 FTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHT--AVVEDYSIH---R------- 241 (368)
Q Consensus 174 ~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~--~~v~~v~~~---~------- 241 (368)
+.||++.+ |.+++|+. ...|+++|.||++++|+...... .+|.... ..-.++++- +
T Consensus 392 l~Ghtdav---w~l~~s~~-~~~Llscs~DgTvr~w~~~~~~~--------~~f~~~~e~g~Plsvd~~ss~~a~~~~s~ 459 (577)
T KOG0642|consen 392 LLGHTDAV---WLLALSST-KDRLLSCSSDGTVRLWEPTEESP--------CTFGEPKEHGYPLSVDRTSSRPAHSLASF 459 (577)
T ss_pred eeccccce---eeeeeccc-ccceeeecCCceEEeeccCCcCc--------cccCCccccCCcceEeeccchhHhhhhhc
Confidence 88999999 69999998 88899999999999999866532 1111100 001122221 0
Q ss_pred ----------------ecccccCCCCc----cceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCccc
Q psy4579 242 ----------------LILGTHTSDEQ----NHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEG 301 (368)
Q Consensus 242 ----------------~~~~~~~~d~~----~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~ 301 (368)
.++.+....+. ....+.+ .....+.... .+...+..++..++.++.... +|..
T Consensus 460 ~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vVs----~~~~~~~~~~--hed~~Ir~~dn~~~~~l~s~~-a~~~ 532 (577)
T KOG0642|consen 460 RFGYTSIDDMEVVSDLLIFESSASPGPRRYPQINKVVS----HPTADITFTA--HEDRSIRFFDNKTGKILHSMV-AHKD 532 (577)
T ss_pred ccccccchhhhhhhheeeccccCCCcccccCccceEEe----cCCCCeeEec--ccCCceecccccccccchhee-eccc
Confidence 00000000000 0000000 1111111111 244557778888888888877 8999
Q ss_pred ceeEEEEeCCCCcEEEEecCCCeEEEEECCC
Q psy4579 302 EVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 302 ~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
.++++++.|+|. +|++|+.|+.+++|.+..
T Consensus 533 svtslai~~ng~-~l~s~s~d~sv~l~kld~ 562 (577)
T KOG0642|consen 533 SVTSLAIDPNGP-YLMSGSHDGSVRLWKLDV 562 (577)
T ss_pred eecceeecCCCc-eEEeecCCceeehhhccc
Confidence 999999999995 666999999999999853
|
|
| >KOG1445|consensus | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.4e-15 Score=135.38 Aligned_cols=119 Identities=22% Similarity=0.354 Sum_probs=98.3
Q ss_pred eeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeee---cccccCCCCccceEEEEee
Q psy4579 185 YGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRL---ILGTHTSDEQNHLLIASVQ 261 (368)
Q Consensus 185 ~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~---~~~~~~~d~~~~~~~~~~~ 261 (368)
..+.|.|-+...||.+++||.|+||.+..+........+...+.+|...|+++.|||+ ++++.+.|.++++
T Consensus 631 tDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e~~~tPe~~lt~h~eKI~slRfHPLAadvLa~asyd~Ti~l------ 704 (1012)
T KOG1445|consen 631 TDLHWDPFDDERLAVATDDGQINLWRLTANGLPENEMTPEKILTIHGEKITSLRFHPLAADVLAVASYDSTIEL------ 704 (1012)
T ss_pred eecccCCCChHHeeecccCceEEEEEeccCCCCcccCCcceeeecccceEEEEEecchhhhHhhhhhccceeee------
Confidence 4889999878899999999999999998887777777888899999999999999984 4555554444444
Q ss_pred cCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCC
Q psy4579 262 LPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKH 333 (368)
Q Consensus 262 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~ 333 (368)
||+..+.....+. +|.+.|..++|+|+| +.+||.+.||+|++|+.++.
T Consensus 705 ----------------------WDl~~~~~~~~l~-gHtdqIf~~AWSpdG-r~~AtVcKDg~~rVy~Prs~ 752 (1012)
T KOG1445|consen 705 ----------------------WDLANAKLYSRLV-GHTDQIFGIAWSPDG-RRIATVCKDGTLRVYEPRSR 752 (1012)
T ss_pred ----------------------eehhhhhhhheec-cCcCceeEEEECCCC-cceeeeecCceEEEeCCCCC
Confidence 4444555555555 999999999999999 79999999999999998863
|
|
| >KOG1446|consensus | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.6e-14 Score=118.72 Aligned_cols=199 Identities=19% Similarity=0.240 Sum_probs=136.5
Q ss_pred EEEEEEecCCCccccccCCcccCCCCcccCCCCC-eeeeeccccCCCCceeeEecCCCCCeeEEEeC--CCcEEEEeCCC
Q psy4579 84 LLIASVQLPNEDAQFDASNYDTDKGGNVQLPNED-AQFDASNYDTDKGGYGLSWNPSLNGYLLSASD--DHTICLWDINA 160 (368)
Q Consensus 84 ~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~-~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~--dg~v~iwd~~~ 160 (368)
..|.++.+...+..+.++ +.|-.+++|+.. ++...+...++-.|..++|.... +.++.++. |.+||.-++.+
T Consensus 15 ~~i~sl~fs~~G~~lits----s~dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~-~~~i~sStk~d~tIryLsl~d 89 (311)
T KOG1446|consen 15 GKINSLDFSDDGLLLITS----SEDDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHS-NTVIHSSTKEDDTIRYLSLHD 89 (311)
T ss_pred CceeEEEecCCCCEEEEe----cCCCeEEEEEcCCCceeeEeecccccccEEEEecCC-ceEEEccCCCCCceEEEEeec
Confidence 347778887666555543 357789999965 45566666666788899998776 66666665 89999999988
Q ss_pred CCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEe
Q psy4579 161 TPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIH 240 (368)
Q Consensus 161 ~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~ 240 (368)
.+ .++.|.||...|. +|+.+|- +..++|+|.|++|++||+|... +...+.....++ ++|.
T Consensus 90 Nk-------ylRYF~GH~~~V~---sL~~sP~-~d~FlS~S~D~tvrLWDlR~~~-------cqg~l~~~~~pi--~AfD 149 (311)
T KOG1446|consen 90 NK-------YLRYFPGHKKRVN---SLSVSPK-DDTFLSSSLDKTVRLWDLRVKK-------CQGLLNLSGRPI--AAFD 149 (311)
T ss_pred Cc-------eEEEcCCCCceEE---EEEecCC-CCeEEecccCCeEEeeEecCCC-------CceEEecCCCcc--eeEC
Confidence 75 6899999999997 9999998 7999999999999999999763 333333333344 4555
Q ss_pred e--ecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEE
Q psy4579 241 R--LILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIAT 318 (368)
Q Consensus 241 ~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~las 318 (368)
| ++++.+.....++++.. +.+|.. ......+..+-....+.+.|+|+|..+|++
T Consensus 150 p~GLifA~~~~~~~IkLyD~-------------Rs~dkg-----------PF~tf~i~~~~~~ew~~l~FS~dGK~iLls 205 (311)
T KOG1446|consen 150 PEGLIFALANGSELIKLYDL-------------RSFDKG-----------PFTTFSITDNDEAEWTDLEFSPDGKSILLS 205 (311)
T ss_pred CCCcEEEEecCCCeEEEEEe-------------cccCCC-----------CceeEccCCCCccceeeeEEcCCCCEEEEE
Confidence 4 55555554433333322 222211 011112222446688999999999766655
Q ss_pred ecCCCeEEEEECCC
Q psy4579 319 KTPSSDVLVFDYTK 332 (368)
Q Consensus 319 gs~Dg~i~iwd~~~ 332 (368)
+..+.+++.|.=.
T Consensus 206 -T~~s~~~~lDAf~ 218 (311)
T KOG1446|consen 206 -TNASFIYLLDAFD 218 (311)
T ss_pred -eCCCcEEEEEccC
Confidence 7888899998643
|
|
| >KOG0303|consensus | Back alignment and domain information |
|---|
Probab=99.66 E-value=2.9e-15 Score=126.32 Aligned_cols=131 Identities=21% Similarity=0.307 Sum_probs=108.4
Q ss_pred ceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee---eccccc
Q psy4579 171 KTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR---LILGTH 247 (368)
Q Consensus 171 ~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~---~~~~~~ 247 (368)
.-.+.||+++| +.++|+|-+.+.|||||+|.+|.||++-.+.....+..++..+.+|...|.-++||| +++.+.
T Consensus 74 ~P~v~GHt~~v---LDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsa 150 (472)
T KOG0303|consen 74 YPLVCGHTAPV---LDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSA 150 (472)
T ss_pred CCCccCccccc---cccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhc
Confidence 35678999999 599999998899999999999999999877666666678889999999999999997 456666
Q ss_pred CCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEE
Q psy4579 248 TSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLV 327 (368)
Q Consensus 248 ~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~i 327 (368)
+.|..+.+| +..+|+..+++ .|.+-|.++.|+-+| .+|+|.+.|..|||
T Consensus 151 g~Dn~v~iW----------------------------nv~tgeali~l--~hpd~i~S~sfn~dG-s~l~TtckDKkvRv 199 (472)
T KOG0303|consen 151 GSDNTVSIW----------------------------NVGTGEALITL--DHPDMVYSMSFNRDG-SLLCTTCKDKKVRV 199 (472)
T ss_pred cCCceEEEE----------------------------eccCCceeeec--CCCCeEEEEEeccCC-ceeeeecccceeEE
Confidence 655544443 33456666665 499999999999999 78889999999999
Q ss_pred EECCCCCC
Q psy4579 328 FDYTKHPS 335 (368)
Q Consensus 328 wd~~~~~~ 335 (368)
||.+....
T Consensus 200 ~dpr~~~~ 207 (472)
T KOG0303|consen 200 IDPRRGTV 207 (472)
T ss_pred EcCCCCcE
Confidence 99997543
|
|
| >KOG0642|consensus | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.4e-15 Score=133.62 Aligned_cols=229 Identities=16% Similarity=0.112 Sum_probs=157.7
Q ss_pred ccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCC-CCCcccccceeeeccccceecceeeEEeCCCCCeEEEee
Q psy4579 123 SNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATP-KENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSAS 201 (368)
Q Consensus 123 ~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~-~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s 201 (368)
++..|.+.|+++.|.|.. ..|++|+.||++++|++.+.. ......+++.+|++|.++| +|++..+. +..+++|+
T Consensus 289 tl~s~~d~ir~l~~~~se-p~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPV---l~v~v~~n-~~~~ysgg 363 (577)
T KOG0642|consen 289 TLRSHDDCIRALAFHPSE-PVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPV---LCVVVPSN-GEHCYSGG 363 (577)
T ss_pred eeecchhhhhhhhcCCCC-CeEEEeccccchhhhhhcccCCccccceeeeEEEecccCce---EEEEecCC-ceEEEeec
Confidence 567799999999999987 799999999999999995422 1223466889999999999 59999988 99999999
Q ss_pred CCCcEEEEECCCCCCCCcc---ccceeeeecccccEeEEEEee--ecccccCCCCccceEEEEeecC----Ccccccccc
Q psy4579 202 DDHTICLWDINATPKENRV---IDAKTIFTGHTAVVEDYSIHR--LILGTHTSDEQNHLLIASVQLP----NEDAQFDAS 272 (368)
Q Consensus 202 ~dg~i~iwd~~~~~~~~~~---~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~d~~~~~~~~~~~~~----~~~~~~~~~ 272 (368)
.||+|+.|++-........ ......+.||+..|+.++++. ..+.+++.|++++.|...-..+ .........
T Consensus 364 ~Dg~I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~~~~~~~~f~~~~e~g~Pl 443 (577)
T KOG0642|consen 364 IDGTIRCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEPTEESPCTFGEPKEHGYPL 443 (577)
T ss_pred cCceeeeeccCCCCCcccccCcchhccceeccccceeeeeecccccceeeecCCceEEeeccCCcCccccCCccccCCcc
Confidence 9999999976522111111 122456889999999999984 5678888899999986432211 110000000
Q ss_pred cccC------------CCCCcccccCCCCceeeeeec------CcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCC
Q psy4579 273 NYDT------------DKGDFGGFGSVSGKIEIEIKI------NHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHP 334 (368)
Q Consensus 273 ~~d~------------~~~~~~~~~~~~~~~~~~~~~------~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~ 334 (368)
..|. +.+...+.+...+.....+.. .-...++.+.++|.++ +..++-+|+.|+++|...
T Consensus 444 svd~~ss~~a~~~~s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vVs~~~~~-~~~~~hed~~Ir~~dn~~-- 520 (577)
T KOG0642|consen 444 SVDRTSSRPAHSLASFRFGYTSIDDMEVVSDLLIFESSASPGPRRYPQINKVVSHPTAD-ITFTAHEDRSIRFFDNKT-- 520 (577)
T ss_pred eEeeccchhHhhhhhcccccccchhhhhhhheeeccccCCCcccccCccceEEecCCCC-eeEecccCCceecccccc--
Confidence 1110 111111112222211111110 1224688899999995 555999999999999976
Q ss_pred CCCCCCCCCCCceeeecccCceeeecceeeeec
Q psy4579 335 SKPDPNGECHPDLRLRGHQKEGLIEGTYNCYLQ 367 (368)
Q Consensus 335 ~~~~~~~~~~~~~~~~gh~~~V~~l~w~p~~~~ 367 (368)
..++.....|...|.+++..|+.+.
T Consensus 521 --------~~~l~s~~a~~~svtslai~~ng~~ 545 (577)
T KOG0642|consen 521 --------GKILHSMVAHKDSVTSLAIDPNGPY 545 (577)
T ss_pred --------cccchheeeccceecceeecCCCce
Confidence 6667777899999999999998653
|
|
| >KOG4227|consensus | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.7e-14 Score=121.69 Aligned_cols=303 Identities=12% Similarity=0.069 Sum_probs=188.6
Q ss_pred hhhhhhhhhhhcCcchheeecccccccCceeeEecCCcccccCCCCccccccCcceeeecccc---CC---CCCcEEEEE
Q psy4579 15 VINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHT---SD---EQNHLLIAS 88 (368)
Q Consensus 15 ~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~---~~---~~~~~~i~~ 88 (368)
.+.++|+--....|++...+..| ...+..++|+.+++.|++|++|..+++|.-+-.....+ .+ ++....|.+
T Consensus 33 ~~~k~F~~~~~~R~~~qKD~~~H--~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~ 110 (609)
T KOG4227|consen 33 SVVKTFRPDFQHRPFCQKDVREH--TGCINALQFSHNDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFS 110 (609)
T ss_pred hhhhhhchhhhhcchhhhhhhhh--ccccceeeeccCCeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEE
Confidence 34455544444455555544443 45788999999999999999999998887654422222 22 333366889
Q ss_pred EecCCCccccccCCcccCCCCcccCCCCCeeeeeccccCCC---CceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCC
Q psy4579 89 VQLPNEDAQFDASNYDTDKGGNVQLPNEDAQFDASNYDTDK---GGYGLSWNPSLNGYLLSASDDHTICLWDINATPKEN 165 (368)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~h~~---~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~ 165 (368)
+.|...+..+... ..+|+|..-+++.+...-...|+. .|+.+..+|.. +.|++.+.+|.|.+||.+......
T Consensus 111 L~F~~~N~~~~SG----~~~~~VI~HDiEt~qsi~V~~~~~~~~~VY~m~~~P~D-N~~~~~t~~~~V~~~D~Rd~~~~~ 185 (609)
T KOG4227|consen 111 LEFDLENRFLYSG----ERWGTVIKHDIETKQSIYVANENNNRGDVYHMDQHPTD-NTLIVVTRAKLVSFIDNRDRQNPI 185 (609)
T ss_pred EEEccCCeeEecC----CCcceeEeeecccceeeeeecccCcccceeecccCCCC-ceEEEEecCceEEEEeccCCCCCC
Confidence 9887766544433 478999988888766666666665 99999999997 999999999999999998764321
Q ss_pred cccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeec---ccc---cEeEEEE
Q psy4579 166 RVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTG---HTA---VVEDYSI 239 (368)
Q Consensus 166 ~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~---~~~---~v~~v~~ 239 (368)
...+.+..+..- +++.|+|....+|++.+.-+-+-+||.+.... ++....+ -.. .-..+.|
T Consensus 186 -----~~~~~AN~~~~F--~t~~F~P~~P~Li~~~~~~~G~~~~D~R~~~~------~~~~~~~~~~L~~~~~~~M~~~~ 252 (609)
T KOG4227|consen 186 -----SLVLPANSGKNF--YTAEFHPETPALILVNSETGGPNVFDRRMQAR------PVYQRSMFKGLPQENTEWMGSLW 252 (609)
T ss_pred -----ceeeecCCCccc--eeeeecCCCceeEEeccccCCCCceeeccccc------hHHhhhccccCcccchhhhheee
Confidence 122223332222 58999998788999999999999999987642 2221111 111 0112333
Q ss_pred eeecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcc-------cceeEEEEeCCC
Q psy4579 240 HRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHE-------GEVNRARYMPQN 312 (368)
Q Consensus 240 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~-------~~i~~~~~~p~~ 312 (368)
++ ++.++.... +...-..+|..+.++.. ++..|. ..+.+++|-.+.
T Consensus 253 ~~-----------------------~G~Q~msiR---R~~~P~~~D~~S~R~~V-~k~D~N~~GY~N~~T~KS~~F~~D~ 305 (609)
T KOG4227|consen 253 SP-----------------------SGNQFMSIR---RGKCPLYFDFISQRCFV-LKSDHNPNGYCNIKTIKSMTFIDDY 305 (609)
T ss_pred CC-----------------------CCCeehhhh---ccCCCEEeeeeccccee-EeccCCCCcceeeeeeeeeeeecce
Confidence 32 111111100 00001122333322221 111232 356778887665
Q ss_pred CcEEEEecCCCeEEEEECCCCCCCCCCC--CC-----------CCCceeeecccCceeeecceeeee
Q psy4579 313 PCVIATKTPSSDVLVFDYTKHPSKPDPN--GE-----------CHPDLRLRGHQKEGLIEGTYNCYL 366 (368)
Q Consensus 313 ~~~lasgs~Dg~i~iwd~~~~~~~~~~~--~~-----------~~~~~~~~gh~~~V~~l~w~p~~~ 366 (368)
-++|||.+-.|++|.+.......-.+ |. ......|.||.+.++.+.|+|+.+
T Consensus 306 --~v~tGSD~~~i~~WklP~~~ds~G~~~IG~~~~~~~~~~~i~~~~~VLrGHRSv~NQVRF~~H~~ 370 (609)
T KOG4227|consen 306 --TVATGSDHWGIHIWKLPRANDSYGFTQIGHDEEEMPSEIFIEKELTVLRGHRSVPNQVRFSQHNN 370 (609)
T ss_pred --eeeccCcccceEEEecCCCccccCccccCcchhhCchhheecceeEEEecccccccceeecCCcc
Confidence 47799999999999987644322100 00 112346789999999999998753
|
|
| >KOG1539|consensus | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.5e-14 Score=132.63 Aligned_cols=99 Identities=16% Similarity=0.216 Sum_probs=86.9
Q ss_pred CCCCcccCCCCCe-eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecc
Q psy4579 106 DKGGNVQLPNEDA-QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVR 184 (368)
Q Consensus 106 ~~~g~i~i~~~~~-~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~ 184 (368)
...|.+++||... +.+.++.++...|+++.-+|-- +.+|.|..+|+|.+++++..+ .+..++...+.|+
T Consensus 179 s~~G~lql~Nvrt~K~v~~f~~~~s~IT~ieqsPaL-DVVaiG~~~G~ViifNlK~dk-------il~sFk~d~g~Vt-- 248 (910)
T KOG1539|consen 179 SSQGRLQLWNVRTGKVVYTFQEFFSRITAIEQSPAL-DVVAIGLENGTVIIFNLKFDK-------ILMSFKQDWGRVT-- 248 (910)
T ss_pred ecCCcEEEEEeccCcEEEEecccccceeEeccCCcc-eEEEEeccCceEEEEEcccCc-------EEEEEEcccccee--
Confidence 3589999999875 6778888899999999999997 899999999999999999875 5677875568997
Q ss_pred eeeEEeCCCCCeEEEeeCCCcEEEEECCCCC
Q psy4579 185 YGLSWNPSLNGYLLSASDDHTICLWDINATP 215 (368)
Q Consensus 185 ~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~ 215 (368)
+++|.-|+..++++|+..|.+-+||++...
T Consensus 249 -slSFrtDG~p~las~~~~G~m~~wDLe~kk 278 (910)
T KOG1539|consen 249 -SLSFRTDGNPLLASGRSNGDMAFWDLEKKK 278 (910)
T ss_pred -EEEeccCCCeeEEeccCCceEEEEEcCCCe
Confidence 999999877889999999999999998863
|
|
| >KOG0644|consensus | Back alignment and domain information |
|---|
Probab=99.62 E-value=5.4e-16 Score=141.92 Aligned_cols=211 Identities=17% Similarity=0.266 Sum_probs=153.3
Q ss_pred eeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEe
Q psy4579 121 DASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSA 200 (368)
Q Consensus 121 ~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~ 200 (368)
+..+.+|-.+|+|+.|...| .++++|+.|..|+||..++.. +....+||++.++ .++.+.. +.+++++
T Consensus 183 ikrLlgH~naVyca~fDrtg-~~Iitgsdd~lvKiwS~et~~-------~lAs~rGhs~dit---dlavs~~-n~~iaaa 250 (1113)
T KOG0644|consen 183 IKRLLGHRNAVYCAIFDRTG-RYIITGSDDRLVKIWSMETAR-------CLASCRGHSGDIT---DLAVSSN-NTMIAAA 250 (1113)
T ss_pred HHHHHhhhhheeeeeecccc-ceEeecCccceeeeeeccchh-------hhccCCCCccccc---hhccchh-hhhhhhc
Confidence 44577899999999999999 999999999999999988875 5688999999997 9998877 8899999
Q ss_pred eCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeeecccccCCCCccceEEEEee---cCC------cccc---
Q psy4579 201 SDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQ---LPN------EDAQ--- 268 (368)
Q Consensus 201 s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~---~~~------~~~~--- 268 (368)
|.|..|++|-+..+ .++..+.+|++.|++++|+|.. +.+.|+++++|.+... +.+ ++..
T Consensus 251 S~D~vIrvWrl~~~-------~pvsvLrghtgavtaiafsP~~--sss~dgt~~~wd~r~~~~~y~prp~~~~~~~~~~s 321 (1113)
T KOG0644|consen 251 SNDKVIRVWRLPDG-------APVSVLRGHTGAVTAIAFSPRA--SSSDDGTCRIWDARLEPRIYVPRPLKFTEKDLVDS 321 (1113)
T ss_pred ccCceEEEEecCCC-------chHHHHhccccceeeeccCccc--cCCCCCceEeccccccccccCCCCCCcccccceee
Confidence 99999999999988 5788899999999999999865 6677888888876621 110 0000
Q ss_pred ---------cccccccCCCC----------------------------------CcccccCCCCceeeeeecCcccceeE
Q psy4579 269 ---------FDASNYDTDKG----------------------------------DFGGFGSVSGKIEIEIKINHEGEVNR 305 (368)
Q Consensus 269 ---------~~~~~~d~~~~----------------------------------~~~~~~~~~~~~~~~~~~~h~~~i~~ 305 (368)
+....-|...+ .+..|.+.+|...... .+|...+..
T Consensus 322 ~~~~~~~~~f~Tgs~d~ea~n~e~~~l~~~~~~lif~t~ssd~~~~~~~ar~~~~~~vwnl~~g~l~H~l-~ghsd~~yv 400 (1113)
T KOG0644|consen 322 ILFENNGDRFLTGSRDGEARNHEFEQLAWRSNLLIFVTRSSDLSSIVVTARNDHRLCVWNLYTGQLLHNL-MGHSDEVYV 400 (1113)
T ss_pred eeccccccccccccCCcccccchhhHhhhhccceEEEeccccccccceeeeeeeEeeeeecccchhhhhh-cccccceee
Confidence 00000000000 0111222233222222 278899999
Q ss_pred EEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceee-ecccCceeeecceee
Q psy4579 306 ARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRL-RGHQKEGLIEGTYNC 364 (368)
Q Consensus 306 ~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~-~gh~~~V~~l~w~p~ 364 (368)
+.++|.++.+..+++.||.+.|||+-. ..|+..+ .||. .+..-+||+.
T Consensus 401 Ld~Hpfn~ri~msag~dgst~iwdi~e----------g~pik~y~~gh~-kl~d~kFSqd 449 (1113)
T KOG0644|consen 401 LDVHPFNPRIAMSAGYDGSTIIWDIWE----------GIPIKHYFIGHG-KLVDGKFSQD 449 (1113)
T ss_pred eeecCCCcHhhhhccCCCceEeeeccc----------CCcceeeecccc-eeeccccCCC
Confidence 999999999999999999999999964 4444333 4543 3444556554
|
|
| >KOG1009|consensus | Back alignment and domain information |
|---|
Probab=99.61 E-value=4.6e-15 Score=125.54 Aligned_cols=163 Identities=15% Similarity=0.252 Sum_probs=123.4
Q ss_pred CCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCC--cccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCc
Q psy4579 128 DKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKEN--RVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHT 205 (368)
Q Consensus 128 ~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~--~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~ 205 (368)
..+|..+.|.++..+.||||+.|..|++|.++...... ...+....+..|+..|+ ++.|+|+ +.+||||+.+|.
T Consensus 13 ~~pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN---~vRf~p~-gelLASg~D~g~ 88 (434)
T KOG1009|consen 13 HEPVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVN---VVRFSPD-GELLASGGDGGE 88 (434)
T ss_pred CCceEEEEeccCcccceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeE---EEEEcCC-cCeeeecCCCce
Confidence 35899999999875599999999999999998765433 23445678889999997 9999999 999999999999
Q ss_pred EEEEECCCCCCCCccccceeeeecccccEeEEEEeeecccccCCCCccceEEEEeecCCcccccccccccCCCCCccccc
Q psy4579 206 ICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFG 285 (368)
Q Consensus 206 i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 285 (368)
|.+|-...-. .+...+ ..+-+ ...|+
T Consensus 89 v~lWk~~~~~----------~~~~d~----e~~~~------------ke~w~---------------------------- 114 (434)
T KOG1009|consen 89 VFLWKQGDVR----------IFDADT----EADLN------------KEKWV---------------------------- 114 (434)
T ss_pred EEEEEecCcC----------Cccccc----hhhhC------------ccceE----------------------------
Confidence 9999765310 000000 00000 01111
Q ss_pred CCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeecccCceeeecceeee
Q psy4579 286 SVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 286 ~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p~~ 365 (368)
......+|...|..++|+|++ .++++|+.|.++++||+.. ...+..+.+|...|+.++|.|..
T Consensus 115 ------v~k~lr~h~~diydL~Ws~d~-~~l~s~s~dns~~l~Dv~~----------G~l~~~~~dh~~yvqgvawDpl~ 177 (434)
T KOG1009|consen 115 ------VKKVLRGHRDDIYDLAWSPDS-NFLVSGSVDNSVRLWDVHA----------GQLLAILDDHEHYVQGVAWDPLN 177 (434)
T ss_pred ------EEEEecccccchhhhhccCCC-ceeeeeeccceEEEEEecc----------ceeEeeccccccccceeecchhh
Confidence 111223799999999999999 6788999999999999986 55566888999999999999975
|
|
| >KOG1188|consensus | Back alignment and domain information |
|---|
Probab=99.61 E-value=7.2e-16 Score=127.64 Aligned_cols=193 Identities=15% Similarity=0.169 Sum_probs=125.8
Q ss_pred hhhhhhhhhhhcCcchheeecccccccCceeeEecC--CcccccCCCCccccccCcceeeeccccCC-CCCc-EEEEEEe
Q psy4579 15 VINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLP--DVTSVQLPNEDAQFDASNYDTDKGTHTSD-EQNH-LLIASVQ 90 (368)
Q Consensus 15 ~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~p--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~i~~~~ 90 (368)
.-+..++++.+.+.-++..+..+.- -+.-+.|.. ....+.+++.||+|++|+.+......... .++. ....++.
T Consensus 47 lSngsv~lyd~~tg~~l~~fk~~~~--~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~~f~~ld 124 (376)
T KOG1188|consen 47 LSNGSVRLYDKGTGQLLEEFKGPPA--TTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQSGTPFICLD 124 (376)
T ss_pred ecCCeEEEEeccchhhhheecCCCC--cccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCCCCCcceEee
Confidence 3445566666666656655544321 234566765 35557779999999877766553322222 2221 2333333
Q ss_pred cCCCccccccCCcccCCCCcccCCCCCe--eeeec-cccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcc
Q psy4579 91 LPNEDAQFDASNYDTDKGGNVQLPNEDA--QFDAS-NYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRV 167 (368)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~g~i~i~~~~~--~~~~~-~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~ 167 (368)
.--....+.+..-....+-.+.+||... +.+.. .-.|.+.|++|+|+|..|++|+|||.||.|.+||++....+.
T Consensus 125 ~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~~d~EeD-- 202 (376)
T KOG1188|consen 125 LNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTKKDNEED-- 202 (376)
T ss_pred ccCcCCeEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEeecccceEEeeecCCCcchh--
Confidence 3222333333332334566788898754 32333 345999999999999999999999999999999998764432
Q ss_pred cccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCC
Q psy4579 168 IDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPK 216 (368)
Q Consensus 168 ~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~ 216 (368)
.+...--|...|. ++.|+......|.+-+..++..+|+++.+..
T Consensus 203 --aL~~viN~~sSI~---~igw~~~~ykrI~clTH~Etf~~~ele~~~~ 246 (376)
T KOG1188|consen 203 --ALLHVINHGSSIH---LIGWLSKKYKRIMCLTHMETFAIYELEDGSE 246 (376)
T ss_pred --hHHHhhcccceee---eeeeecCCcceEEEEEccCceeEEEccCCCh
Confidence 2233334666775 9999987556789999999999999998753
|
|
| >KOG1587|consensus | Back alignment and domain information |
|---|
Probab=99.60 E-value=2.8e-14 Score=130.98 Aligned_cols=237 Identities=14% Similarity=0.107 Sum_probs=149.3
Q ss_pred EEEEEEecCCCccccccCCcccCCCCcccCCCCCeee-------eeccccCCCCceeeEecCCC-CCeeEEEeCCCcEEE
Q psy4579 84 LLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQF-------DASNYDTDKGGYGLSWNPSL-NGYLLSASDDHTICL 155 (368)
Q Consensus 84 ~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~-------~~~~~~h~~~v~~l~~sp~~-~~~lasg~~dg~v~i 155 (368)
..+.++.+.+....+.+++ ..+|.|.+||..... ......|..+|+.+.|..+- +.-+++++.||.|+.
T Consensus 243 s~v~~~~f~p~~p~ll~gG---~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW~~~~~~~~f~s~ssDG~i~~ 319 (555)
T KOG1587|consen 243 SEVTCLKFCPFDPNLLAGG---CYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVWLQNEHNTEFFSLSSDGSICS 319 (555)
T ss_pred CceeEEEeccCCcceEEee---ccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEEeccCCCCceEEEecCCcEee
Confidence 3456666655555555555 468999999986422 22345599999999998653 134999999999999
Q ss_pred EeCCCCCCCCcccccce------eeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCC-ccccceeeee
Q psy4579 156 WDINATPKENRVIDAKT------IFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKEN-RVIDAKTIFT 228 (368)
Q Consensus 156 wd~~~~~~~~~~~~~~~------~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~-~~~~~~~~~~ 228 (368)
|+++............. ....+ ..+ .+++|.|.+.+.|+.|+++|.|.--+-....... ....+...+.
T Consensus 320 W~~~~l~~P~e~~~~~~~~~~~~~~~~~-~~~---t~~~F~~~~p~~FiVGTe~G~v~~~~r~g~~~~~~~~~~~~~~~~ 395 (555)
T KOG1587|consen 320 WDTDMLSLPVEGLLLESKKHKGQQSSKA-VGA---TSLKFEPTDPNHFIVGTEEGKVYKGCRKGYTPAPEVSYKGHSTFI 395 (555)
T ss_pred eeccccccchhhcccccccccccccccc-cce---eeEeeccCCCceEEEEcCCcEEEEEeccCCccccccccccccccc
Confidence 98876433211111111 11112 223 3999999889999999999999874332222211 2223344566
Q ss_pred cccccEeEEEEeee---cccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeE
Q psy4579 229 GHTAVVEDYSIHRL---ILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNR 305 (368)
Q Consensus 229 ~~~~~v~~v~~~~~---~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~ 305 (368)
.|..+|+++.++|+ ++.+++ |-.+++|-... .......+. .+...|.+
T Consensus 396 ~h~g~v~~v~~nPF~~k~fls~g-DW~vriWs~~~---------------------------~~~Pl~~~~-~~~~~v~~ 446 (555)
T KOG1587|consen 396 THIGPVYAVSRNPFYPKNFLSVG-DWTVRIWSEDV---------------------------IASPLLSLD-SSPDYVTD 446 (555)
T ss_pred ccCcceEeeecCCCccceeeeec-cceeEeccccC---------------------------CCCcchhhh-hccceeee
Confidence 78899999999863 333333 44455542210 011222222 56677999
Q ss_pred EEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeecccCceeeecceee
Q psy4579 306 ARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYNC 364 (368)
Q Consensus 306 ~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p~ 364 (368)
++|+|..+.+|+++..||+|.+||+..... .|+....-+....+.+.|+++
T Consensus 447 vaWSptrpavF~~~d~~G~l~iWDLl~~~~--------~Pv~s~~~~~~~l~~~~~s~~ 497 (555)
T KOG1587|consen 447 VAWSPTRPAVFATVDGDGNLDIWDLLQDDE--------EPVLSQKVCSPALTRVRWSPN 497 (555)
T ss_pred eEEcCcCceEEEEEcCCCceehhhhhcccc--------CCcccccccccccceeecCCC
Confidence 999999999999999999999999987443 333333333444555666553
|
|
| >KOG1445|consensus | Back alignment and domain information |
|---|
Probab=99.60 E-value=8.9e-15 Score=130.41 Aligned_cols=159 Identities=24% Similarity=0.336 Sum_probs=123.5
Q ss_pred EEecCCCccccccCCcc-----cCCCCcccCCCCC--eeeee---ccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEe
Q psy4579 88 SVQLPNEDAQFDASNYD-----TDKGGNVQLPNED--AQFDA---SNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWD 157 (368)
Q Consensus 88 ~~~~~~~~~~~~~~~~~-----~~~~g~i~i~~~~--~~~~~---~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd 157 (368)
...+|.+...+.+..-. .+..|.|.|++++ ++... ...-....|+.+.|+|-.+..||.++.||.|++|.
T Consensus 577 n~~~PgEsnGfcan~~rvAVPL~g~gG~iai~el~~PGrLPDgv~p~l~Ngt~vtDl~WdPFD~~rLAVa~ddg~i~lWr 656 (1012)
T KOG1445|consen 577 NTRLPGESNGFCANNKRVAVPLAGSGGVIAIYELNEPGRLPDGVMPGLFNGTLVTDLHWDPFDDERLAVATDDGQINLWR 656 (1012)
T ss_pred cccCCCccCceeeccceEEEEecCCCceEEEEEcCCCCCCCcccccccccCceeeecccCCCChHHeeecccCceEEEEE
Confidence 34456555444443211 1347888888764 22221 12224567999999998879999999999999999
Q ss_pred CCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEE
Q psy4579 158 INATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDY 237 (368)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v 237 (368)
+..+........+...+.+|...|+ ++.|+|--.+.|++++.|-+|+|||+++.. ....+.+|++.|..+
T Consensus 657 ~~a~gl~e~~~tPe~~lt~h~eKI~---slRfHPLAadvLa~asyd~Ti~lWDl~~~~-------~~~~l~gHtdqIf~~ 726 (1012)
T KOG1445|consen 657 LTANGLPENEMTPEKILTIHGEKIT---SLRFHPLAADVLAVASYDSTIELWDLANAK-------LYSRLVGHTDQIFGI 726 (1012)
T ss_pred eccCCCCcccCCcceeeecccceEE---EEEecchhhhHhhhhhccceeeeeehhhhh-------hhheeccCcCceeEE
Confidence 9987766666678899999999995 999999878899999999999999999873 456789999999999
Q ss_pred EEee--ecccccCCCCccceE
Q psy4579 238 SIHR--LILGTHTSDEQNHLL 256 (368)
Q Consensus 238 ~~~~--~~~~~~~~d~~~~~~ 256 (368)
+|++ ..+++.+.|+.++++
T Consensus 727 AWSpdGr~~AtVcKDg~~rVy 747 (1012)
T KOG1445|consen 727 AWSPDGRRIATVCKDGTLRVY 747 (1012)
T ss_pred EECCCCcceeeeecCceEEEe
Confidence 9986 577888888777776
|
|
| >KOG1587|consensus | Back alignment and domain information |
|---|
Probab=99.60 E-value=2.5e-14 Score=131.31 Aligned_cols=223 Identities=14% Similarity=0.101 Sum_probs=141.0
Q ss_pred CCcccCCCCCee-eeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceeccee
Q psy4579 108 GGNVQLPNEDAQ-FDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYG 186 (368)
Q Consensus 108 ~g~i~i~~~~~~-~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 186 (368)
++.+.+|+.+.. .....+.-...|.|++|+|..++++|.|+.+|.|.+||++.+..... ...-.....|..++. .
T Consensus 221 ~~~~~vW~~~~p~~Pe~~~~~~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~-s~ls~~~~sh~~~v~---~ 296 (555)
T KOG1587|consen 221 DGVLLVWSLKNPNTPELVLESPSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPP-SGLSALEVSHSEPVT---A 296 (555)
T ss_pred CceEEEEecCCCCCceEEEecCCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCC-cccccccccCCcCeE---E
Confidence 457888998654 33334556789999999999999999999999999999988754211 011123346788885 8
Q ss_pred eEEeCCC-CCeEEEeeCCCcEEEEECCCCCCCCccccceeee-----ecccccEeEEEEee---ecccccCCCCccceEE
Q psy4579 187 LSWNPSL-NGYLLSASDDHTICLWDINATPKENRVIDAKTIF-----TGHTAVVEDYSIHR---LILGTHTSDEQNHLLI 257 (368)
Q Consensus 187 i~~~p~~-~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~-----~~~~~~v~~v~~~~---~~~~~~~~d~~~~~~~ 257 (368)
+.|..+. +.-|+++|.||.|+.|+++.-............. ......+++++|.+ ..+..|...|. ++-
T Consensus 297 vvW~~~~~~~~f~s~ssDG~i~~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~--v~~ 374 (555)
T KOG1587|consen 297 VVWLQNEHNTEFFSLSSDGSICSWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGK--VYK 374 (555)
T ss_pred EEEeccCCCCceEEEecCCcEeeeeccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcE--EEE
Confidence 9997651 2348999999999999887653321111000001 01234567788863 22222222211 111
Q ss_pred EEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCC
Q psy4579 258 ASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKP 337 (368)
Q Consensus 258 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~ 337 (368)
++ ..+.+.+.- ..-+..... ..|.++|.++.++|.++.+|.|++ |.+++||.-..
T Consensus 375 ~~-------------r~g~~~~~~-----~~~~~~~~~-~~h~g~v~~v~~nPF~~k~fls~g-DW~vriWs~~~----- 429 (555)
T KOG1587|consen 375 GC-------------RKGYTPAPE-----VSYKGHSTF-ITHIGPVYAVSRNPFYPKNFLSVG-DWTVRIWSEDV----- 429 (555)
T ss_pred Ee-------------ccCCccccc-----ccccccccc-cccCcceEeeecCCCccceeeeec-cceeEeccccC-----
Confidence 11 011000000 000111122 378999999999999988887776 99999999862
Q ss_pred CCCCCCCCceeeecccCceeeecceeee
Q psy4579 338 DPNGECHPDLRLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 338 ~~~~~~~~~~~~~gh~~~V~~l~w~p~~ 365 (368)
.-.|+..+..+.+.|++++|||--
T Consensus 430 ----~~~Pl~~~~~~~~~v~~vaWSptr 453 (555)
T KOG1587|consen 430 ----IASPLLSLDSSPDYVTDVAWSPTR 453 (555)
T ss_pred ----CCCcchhhhhccceeeeeEEcCcC
Confidence 256777788899999999999864
|
|
| >KOG2106|consensus | Back alignment and domain information |
|---|
Probab=99.60 E-value=2.4e-13 Score=118.30 Aligned_cols=208 Identities=14% Similarity=0.127 Sum_probs=136.6
Q ss_pred hhhhhhhhcCcchheeecccccccCceeeEecCCcccccCCCCccccccCcceeeeccccCCCCC-cEEEEEEecCCCcc
Q psy4579 18 EEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQN-HLLIASVQLPNEDA 96 (368)
Q Consensus 18 ~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~ 96 (368)
...-||.+.+..+-.... +++..+.++.-..+|+.|. |+.|+.+..|+-+...- ...+.++ .-.+..+ .+....
T Consensus 267 G~i~Iw~~~~~~~~k~~~--aH~ggv~~L~~lr~GtllS-GgKDRki~~Wd~~y~k~-r~~elPe~~G~iRtv-~e~~~d 341 (626)
T KOG2106|consen 267 GNILIWSKGTNRISKQVH--AHDGGVFSLCMLRDGTLLS-GGKDRKIILWDDNYRKL-RETELPEQFGPIRTV-AEGKGD 341 (626)
T ss_pred ceEEEEeCCCceEEeEee--ecCCceEEEEEecCccEee-cCccceEEecccccccc-ccccCchhcCCeeEE-ecCCCc
Confidence 345688888777666665 7788899999999999987 99999997776322211 1111111 1112221 111111
Q ss_pred ccccCCcccCCCCcccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeec
Q psy4579 97 QFDASNYDTDKGGNVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTG 176 (368)
Q Consensus 97 ~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~ 176 (368)
+... ...+.|.-=+++..+....++|.+..+.++.+|+. ++++|++.|+.+++|+ ... ++....
T Consensus 342 -i~vG----TtrN~iL~Gt~~~~f~~~v~gh~delwgla~hps~-~q~~T~gqdk~v~lW~-~~k--------~~wt~~- 405 (626)
T KOG2106|consen 342 -ILVG----TTRNFILQGTLENGFTLTVQGHGDELWGLATHPSK-NQLLTCGQDKHVRLWN-DHK--------LEWTKI- 405 (626)
T ss_pred -EEEe----eccceEEEeeecCCceEEEEecccceeeEEcCCCh-hheeeccCcceEEEcc-CCc--------eeEEEE-
Confidence 1110 11222222334456677788999999999999998 8999999999999999 221 222222
Q ss_pred cccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee--ecccccCCCCccc
Q psy4579 177 HTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LILGTHTSDEQNH 254 (368)
Q Consensus 177 h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~d~~~~ 254 (368)
-..++. |+.|+|. + .+|.|...|...+.|.++.. +..+.....+++++.|+| ..++.++.|..++
T Consensus 406 ~~d~~~---~~~fhps-g-~va~Gt~~G~w~V~d~e~~~--------lv~~~~d~~~ls~v~ysp~G~~lAvgs~d~~iy 472 (626)
T KOG2106|consen 406 IEDPAE---CADFHPS-G-VVAVGTATGRWFVLDTETQD--------LVTIHTDNEQLSVVRYSPDGAFLAVGSHDNHIY 472 (626)
T ss_pred ecCcee---EeeccCc-c-eEEEeeccceEEEEecccce--------eEEEEecCCceEEEEEcCCCCEEEEecCCCeEE
Confidence 234454 9999997 5 99999999999999998852 223333478899999987 5667777766666
Q ss_pred eEEEE
Q psy4579 255 LLIAS 259 (368)
Q Consensus 255 ~~~~~ 259 (368)
++..+
T Consensus 473 iy~Vs 477 (626)
T KOG2106|consen 473 IYRVS 477 (626)
T ss_pred EEEEC
Confidence 65443
|
|
| >KOG2055|consensus | Back alignment and domain information |
|---|
Probab=99.59 E-value=2.4e-14 Score=123.08 Aligned_cols=273 Identities=10% Similarity=0.096 Sum_probs=172.7
Q ss_pred cccccCceeeEecCCcccccCCCCccccccCcceeeeccccCC-CCCcEEEEEEecCCCcc-ccccCCcccCCCCcccCC
Q psy4579 37 HALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSD-EQNHLLIASVQLPNEDA-QFDASNYDTDKGGNVQLP 114 (368)
Q Consensus 37 ~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~g~i~i~ 114 (368)
+....++.|++|+|....|.+++.|+.++++..+-........ .-....|.+..|.+.+. .+..++ .......|
T Consensus 210 ~ps~~~I~sv~FHp~~plllvaG~d~~lrifqvDGk~N~~lqS~~l~~fPi~~a~f~p~G~~~i~~s~----rrky~ysy 285 (514)
T KOG2055|consen 210 HPSHGGITSVQFHPTAPLLLVAGLDGTLRIFQVDGKVNPKLQSIHLEKFPIQKAEFAPNGHSVIFTSG----RRKYLYSY 285 (514)
T ss_pred CcCcCCceEEEecCCCceEEEecCCCcEEEEEecCccChhheeeeeccCccceeeecCCCceEEEecc----cceEEEEe
Confidence 4445679999999999999999999999666554443332222 12234466666644443 333333 34567789
Q ss_pred CCCeeeee---ccccCC-CCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEe
Q psy4579 115 NEDAQFDA---SNYDTD-KGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWN 190 (368)
Q Consensus 115 ~~~~~~~~---~~~~h~-~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~ 190 (368)
|+....+. ...++. ..+.....+|++ ++||..+..|.|.+-...++. .+..++ -.+.|+ .++|+
T Consensus 286 Dle~ak~~k~~~~~g~e~~~~e~FeVShd~-~fia~~G~~G~I~lLhakT~e-------li~s~K-ieG~v~---~~~fs 353 (514)
T KOG2055|consen 286 DLETAKVTKLKPPYGVEEKSMERFEVSHDS-NFIAIAGNNGHIHLLHAKTKE-------LITSFK-IEGVVS---DFTFS 353 (514)
T ss_pred eccccccccccCCCCcccchhheeEecCCC-CeEEEcccCceEEeehhhhhh-------hhheee-eccEEe---eEEEe
Confidence 98754332 344444 457788999999 899999999999998887763 344554 455665 99999
Q ss_pred CCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccE----eEEEEeeecccccCCCCccceEEEEeecCCcc
Q psy4579 191 PSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVV----EDYSIHRLILGTHTSDEQNHLLIASVQLPNED 266 (368)
Q Consensus 191 p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v----~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 266 (368)
.+ +..|++++.+|.|.+||++.. .+++.+... +.| .|++.++.++++|+..+-+.++.....+.
T Consensus 354 Sd-sk~l~~~~~~GeV~v~nl~~~-------~~~~rf~D~-G~v~gts~~~S~ng~ylA~GS~~GiVNIYd~~s~~~--- 421 (514)
T KOG2055|consen 354 SD-SKELLASGGTGEVYVWNLRQN-------SCLHRFVDD-GSVHGTSLCISLNGSYLATGSDSGIVNIYDGNSCFA--- 421 (514)
T ss_pred cC-CcEEEEEcCCceEEEEecCCc-------ceEEEEeec-CccceeeeeecCCCceEEeccCcceEEEeccchhhc---
Confidence 88 888889999999999999987 455655421 222 23334556677766555444432211110
Q ss_pred cccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecC--CCeEEEEECCCCCCCCCCCCCCC
Q psy4579 267 AQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTP--SSDVLVFDYTKHPSKPDPNGECH 344 (368)
Q Consensus 267 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~--Dg~i~iwd~~~~~~~~~~~~~~~ 344 (368)
....+++..+. .-...|++++|+|+. .+||.+|. +..+|+-.+........ ..
T Consensus 422 -------------------s~~PkPik~~d-NLtt~Itsl~Fn~d~-qiLAiaS~~~knalrLVHvPS~TVFsN----fP 476 (514)
T KOG2055|consen 422 -------------------STNPKPIKTVD-NLTTAITSLQFNHDA-QILAIASRVKKNALRLVHVPSCTVFSN----FP 476 (514)
T ss_pred -------------------cCCCCchhhhh-hhheeeeeeeeCcch-hhhhhhhhccccceEEEeccceeeecc----CC
Confidence 01112222222 234579999999999 68777764 67788888764221110 11
Q ss_pred CceeeecccCceeeecceeee
Q psy4579 345 PDLRLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 345 ~~~~~~gh~~~V~~l~w~p~~ 365 (368)
. -..--+.|+||+|||+.
T Consensus 477 ~---~n~~vg~vtc~aFSP~s 494 (514)
T KOG2055|consen 477 T---SNTKVGHVTCMAFSPNS 494 (514)
T ss_pred C---CCCcccceEEEEecCCC
Confidence 1 01234568999999963
|
|
| >KOG1524|consensus | Back alignment and domain information |
|---|
Probab=99.59 E-value=8e-15 Score=128.27 Aligned_cols=187 Identities=14% Similarity=0.142 Sum_probs=131.5
Q ss_pred CCCCcccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecce
Q psy4579 106 DKGGNVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRY 185 (368)
Q Consensus 106 ~~~g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 185 (368)
+.||.+.+.+..++.......|.++|.|-+|+|+| .-|+|++.||.|++|.-... ...++.....+| +
T Consensus 82 s~DGkf~il~k~~rVE~sv~AH~~A~~~gRW~~dG-tgLlt~GEDG~iKiWSrsGM--------LRStl~Q~~~~v---~ 149 (737)
T KOG1524|consen 82 SNDGRFVILNKSARVERSISAHAAAISSGRWSPDG-AGLLTAGEDGVIKIWSRSGM--------LRSTVVQNEESI---R 149 (737)
T ss_pred cCCceEEEecccchhhhhhhhhhhhhhhcccCCCC-ceeeeecCCceEEEEeccch--------HHHHHhhcCcee---E
Confidence 56999999999999999999999999999999999 88999999999999985542 223344455566 5
Q ss_pred eeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee--ecccccCCCCccceEEEEeecC
Q psy4579 186 GLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LILGTHTSDEQNHLLIASVQLP 263 (368)
Q Consensus 186 ~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~d~~~~~~~~~~~~~ 263 (368)
|++|.|+.++.+.+.+..-.|+=..+.. .+...+.|.+-|.+++|++ .++.+++.|-.-++|..-
T Consensus 150 c~~W~p~S~~vl~c~g~h~~IKpL~~n~---------k~i~WkAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~~---- 216 (737)
T KOG1524|consen 150 CARWAPNSNSIVFCQGGHISIKPLAANS---------KIIRWRAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDAQ---- 216 (737)
T ss_pred EEEECCCCCceEEecCCeEEEeeccccc---------ceeEEeccCcEEEEeecCccccceeecCCceeEEeeccc----
Confidence 9999999666666655444444333222 2456788999999999986 566777665444444321
Q ss_pred CcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCC
Q psy4579 264 NEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGEC 343 (368)
Q Consensus 264 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~ 343 (368)
|...+... .|..+|++++|+|+. +++.+|. .+.|+ .
T Consensus 217 -------------------------G~~Lf~S~-~~ey~ITSva~npd~--~~~v~S~-nt~R~---~------------ 252 (737)
T KOG1524|consen 217 -------------------------GANLFTSA-AEEYAITSVAFNPEK--DYLLWSY-NTARF---S------------ 252 (737)
T ss_pred -------------------------CcccccCC-hhccceeeeeecccc--ceeeeee-eeeee---c------------
Confidence 33344443 788899999999984 5555543 33431 1
Q ss_pred CCceeeecccCceeeecceeeeec
Q psy4579 344 HPDLRLRGHQKEGLIEGTYNCYLQ 367 (368)
Q Consensus 344 ~~~~~~~gh~~~V~~l~w~p~~~~ 367 (368)
....+.|..++|||..-|
T Consensus 253 ------~p~~GSifnlsWS~DGTQ 270 (737)
T KOG1524|consen 253 ------SPRVGSIFNLSWSADGTQ 270 (737)
T ss_pred ------CCCccceEEEEEcCCCce
Confidence 123567788888887654
|
|
| >KOG2919|consensus | Back alignment and domain information |
|---|
Probab=99.59 E-value=5.2e-15 Score=121.80 Aligned_cols=209 Identities=17% Similarity=0.196 Sum_probs=141.2
Q ss_pred HHhhhhhhhhhhhhcCcchheeeccccc---ccCceeeEecCCcccccCCCCccccccCcceeee--------ccccCCC
Q psy4579 12 EERVINEEYKIWKKNTPFLYDLVMTHAL---EWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDK--------GTHTSDE 80 (368)
Q Consensus 12 ~~~~~~~~~~~w~~~~~~~~~~~~~~~~---~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~--------~~~~~~~ 80 (368)
....-+++.++|+.-+..+.......+. -=.+.|++|+|||+.|.. +..+.|+++ ++.. .+.+.+.
T Consensus 127 a~ssr~~PIh~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlfa-GykrcirvF--dt~RpGr~c~vy~t~~~~k 203 (406)
T KOG2919|consen 127 AVSSRDQPIHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLFA-GYKRCIRVF--DTSRPGRDCPVYTTVTKGK 203 (406)
T ss_pred eeccccCceeeeeccccccccchhhhhhHHhhhhheeEEecCCCCeEee-cccceEEEe--eccCCCCCCcchhhhhccc
Confidence 3444567788999887754332222211 124679999999999764 466677444 4421 1122222
Q ss_pred CC-cEEEEEEecCCCccccccCCcccCCCCcccCCCCCe-eeeeccccCCCCceeeEecCCCCCeeEEEe-CCCcEEEEe
Q psy4579 81 QN-HLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDA-QFDASNYDTDKGGYGLSWNPSLNGYLLSAS-DDHTICLWD 157 (368)
Q Consensus 81 ~~-~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~-~~~~~~~~h~~~v~~l~~sp~~~~~lasg~-~dg~v~iwd 157 (368)
+. .-.|+++.+.+.+....+.+ +....+-|++.++ ..+..+.+|.+.|+-|.|+++| +.|.+|+ .|-.|..||
T Consensus 204 ~gq~giisc~a~sP~~~~~~a~g---sY~q~~giy~~~~~~pl~llggh~gGvThL~~~edG-n~lfsGaRk~dkIl~WD 279 (406)
T KOG2919|consen 204 FGQKGIISCFAFSPMDSKTLAVG---SYGQRVGIYNDDGRRPLQLLGGHGGGVTHLQWCEDG-NKLFSGARKDDKILCWD 279 (406)
T ss_pred ccccceeeeeeccCCCCcceeee---cccceeeeEecCCCCceeeecccCCCeeeEEeccCc-CeecccccCCCeEEEEe
Confidence 22 23577888866655443332 2335566776655 3455667899999999999999 6777777 588999999
Q ss_pred CCCCCCCCcccccceeeeccccceecceeeE--EeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEe
Q psy4579 158 INATPKENRVIDAKTIFTGHTAVVEVRYGLS--WNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVE 235 (368)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~--~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~ 235 (368)
++..+. ++-.+..|....+ ..|. ..|. +++|++|+.||.|++||+.... .....+..+...|+
T Consensus 280 iR~~~~------pv~~L~rhv~~TN--QRI~FDld~~-~~~LasG~tdG~V~vwdlk~~g------n~~sv~~~~sd~vN 344 (406)
T KOG2919|consen 280 IRYSRD------PVYALERHVGDTN--QRILFDLDPK-GEILASGDTDGSVRVWDLKDLG------NEVSVTGNYSDTVN 344 (406)
T ss_pred ehhccc------hhhhhhhhccCcc--ceEEEecCCC-CceeeccCCCccEEEEecCCCC------Cccccccccccccc
Confidence 997653 5666777766332 2344 4577 8999999999999999998843 34566777999999
Q ss_pred EEEEeee
Q psy4579 236 DYSIHRL 242 (368)
Q Consensus 236 ~v~~~~~ 242 (368)
.++++|.
T Consensus 345 gvslnP~ 351 (406)
T KOG2919|consen 345 GVSLNPI 351 (406)
T ss_pred ceecCcc
Confidence 9999984
|
|
| >KOG2048|consensus | Back alignment and domain information |
|---|
Probab=99.58 E-value=6.3e-14 Score=125.83 Aligned_cols=269 Identities=12% Similarity=0.116 Sum_probs=174.9
Q ss_pred hhhhhhhhhcCcchheeecccccccCceeeEecCCcccccCCCCccccccCcceeeeccccCCC-CCcEEEEEEecCCCc
Q psy4579 17 NEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDE-QNHLLIASVQLPNED 95 (368)
Q Consensus 17 ~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~ 95 (368)
+.-..+|+....++...+..-.....+-.++|++.++ |-+.+.+|.+ ..|++..+...+.. .+-..|.++.+.+..
T Consensus 46 ~g~IEiwN~~~~w~~~~vi~g~~drsIE~L~W~e~~R-LFS~g~sg~i--~EwDl~~lk~~~~~d~~gg~IWsiai~p~~ 122 (691)
T KOG2048|consen 46 DGNIEIWNLSNNWFLEPVIHGPEDRSIESLAWAEGGR-LFSSGLSGSI--TEWDLHTLKQKYNIDSNGGAIWSIAINPEN 122 (691)
T ss_pred CCcEEEEccCCCceeeEEEecCCCCceeeEEEccCCe-EEeecCCceE--EEEecccCceeEEecCCCcceeEEEeCCcc
Confidence 4456789998888777777766777788999996555 4556677776 67788877776663 334567888775544
Q ss_pred cccccCCcccCCCCcccCCCCCeeee---eccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccce
Q psy4579 96 AQFDASNYDTDKGGNVQLPNEDAQFD---ASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKT 172 (368)
Q Consensus 96 ~~~~~~~~~~~~~g~i~i~~~~~~~~---~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~ 172 (368)
..+. .+ ..||-+...+.....+ ..+...++.|.+++|+|++ ..+|+|+.||.|++||+.++..... ...+
T Consensus 123 ~~l~-Ig---cddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~~-~~i~~Gs~Dg~Iriwd~~~~~t~~~--~~~~ 195 (691)
T KOG2048|consen 123 TILA-IG---CDDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPTG-TKIAGGSIDGVIRIWDVKSGQTLHI--ITMQ 195 (691)
T ss_pred ceEE-ee---cCCceEEEEecCCceEEEEeecccccceEEEEEecCCc-cEEEecccCceEEEEEcCCCceEEE--eeec
Confidence 3332 23 2477665565544322 2333456899999999998 8899999999999999988753110 0000
Q ss_pred eeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee--ecccccCCC
Q psy4579 173 IFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LILGTHTSD 250 (368)
Q Consensus 173 ~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~d 250 (368)
.-+..++.-+.+|++.|-. .+.|++|..-|+|++||...+ .....+..|...|.+++... ..+.+++.|
T Consensus 196 ~d~l~k~~~~iVWSv~~Lr--d~tI~sgDS~G~V~FWd~~~g-------TLiqS~~~h~adVl~Lav~~~~d~vfsaGvd 266 (691)
T KOG2048|consen 196 LDRLSKREPTIVWSVLFLR--DSTIASGDSAGTVTFWDSIFG-------TLIQSHSCHDADVLALAVADNEDRVFSAGVD 266 (691)
T ss_pred ccccccCCceEEEEEEEee--cCcEEEecCCceEEEEcccCc-------chhhhhhhhhcceeEEEEcCCCCeEEEccCC
Confidence 1111221222347888885 578999999999999999887 34566777899999998864 233333333
Q ss_pred CccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEEC
Q psy4579 251 EQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDY 330 (368)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~ 330 (368)
+.+..+-... ....+ .....+..|...|.+++..++ .+.+|+.|.++.+--.
T Consensus 267 ~~ii~~~~~~----~~~~w---------------------v~~~~r~~h~hdvrs~av~~~---~l~sgG~d~~l~i~~s 318 (691)
T KOG2048|consen 267 PKIIQYSLTT----NKSEW---------------------VINSRRDLHAHDVRSMAVIEN---ALISGGRDFTLAICSS 318 (691)
T ss_pred CceEEEEecC----Cccce---------------------eeeccccCCcccceeeeeecc---eEEecceeeEEEEccc
Confidence 3222221110 00001 111223378888999988865 5669999999888776
Q ss_pred CC
Q psy4579 331 TK 332 (368)
Q Consensus 331 ~~ 332 (368)
+.
T Consensus 319 ~~ 320 (691)
T KOG2048|consen 319 RE 320 (691)
T ss_pred cc
Confidence 64
|
|
| >KOG0650|consensus | Back alignment and domain information |
|---|
Probab=99.58 E-value=3.6e-14 Score=125.71 Aligned_cols=220 Identities=16% Similarity=0.179 Sum_probs=143.4
Q ss_pred eeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEE
Q psy4579 120 FDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLS 199 (368)
Q Consensus 120 ~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s 199 (368)
+-....+|++.|.||+..|.| ..||+|+.||+|+||.+.++. ++..+. -.+.|+ |++|+|....-++.
T Consensus 392 ~~lvyrGHtg~Vr~iSvdp~G-~wlasGsdDGtvriWEi~TgR-------cvr~~~-~d~~I~---~vaw~P~~~~~vLA 459 (733)
T KOG0650|consen 392 CALVYRGHTGLVRSISVDPSG-EWLASGSDDGTVRIWEIATGR-------CVRTVQ-FDSEIR---SVAWNPLSDLCVLA 459 (733)
T ss_pred eeeeEeccCCeEEEEEecCCc-ceeeecCCCCcEEEEEeecce-------EEEEEe-ecceeE---EEEecCCCCceeEE
Confidence 334567899999999999999 999999999999999999986 344444 234665 99999984444555
Q ss_pred eeCCCcEEEEECCCCCCC----------------Cc-----cc---------cceeeeecccccEeEEEEee--eccccc
Q psy4579 200 ASDDHTICLWDINATPKE----------------NR-----VI---------DAKTIFTGHTAVVEDYSIHR--LILGTH 247 (368)
Q Consensus 200 ~s~dg~i~iwd~~~~~~~----------------~~-----~~---------~~~~~~~~~~~~v~~v~~~~--~~~~~~ 247 (368)
......+.|-+..-+... .+ .| ..+...-.|...|+.+.||. .++++.
T Consensus 460 vA~~~~~~ivnp~~G~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYlatV 539 (733)
T KOG0650|consen 460 VAVGECVLIVNPIFGDRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLATV 539 (733)
T ss_pred EEecCceEEeCccccchhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCceEEEe
Confidence 555555777665443110 00 01 11123334778899999985 344444
Q ss_pred CCCCccc-eEEEE-------------------eecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEE
Q psy4579 248 TSDEQNH-LLIAS-------------------VQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRAR 307 (368)
Q Consensus 248 ~~d~~~~-~~~~~-------------------~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~ 307 (368)
..++..+ +++-. +.|.+....+.+. ....+.++++..+.+...+. .....|..++
T Consensus 540 ~~~~~~~~VliHQLSK~~sQ~PF~kskG~vq~v~FHPs~p~lfVa----Tq~~vRiYdL~kqelvKkL~-tg~kwiS~ms 614 (733)
T KOG0650|consen 540 MPDSGNKSVLIHQLSKRKSQSPFRKSKGLVQRVKFHPSKPYLFVA----TQRSVRIYDLSKQELVKKLL-TGSKWISSMS 614 (733)
T ss_pred ccCCCcceEEEEecccccccCchhhcCCceeEEEecCCCceEEEE----eccceEEEehhHHHHHHHHh-cCCeeeeeee
Confidence 4433322 22211 1122211111111 11234555555544444443 4566899999
Q ss_pred EeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeecccCceeeecceeeee
Q psy4579 308 YMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYNCYL 366 (368)
Q Consensus 308 ~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p~~~ 366 (368)
.+|.|.++| .|+.|+.+..+|+... ..|..++..|...|.+++||+.|+
T Consensus 615 ihp~GDnli-~gs~d~k~~WfDldls---------skPyk~lr~H~~avr~Va~H~ryP 663 (733)
T KOG0650|consen 615 IHPNGDNLI-LGSYDKKMCWFDLDLS---------SKPYKTLRLHEKAVRSVAFHKRYP 663 (733)
T ss_pred ecCCCCeEE-EecCCCeeEEEEcccC---------cchhHHhhhhhhhhhhhhhccccc
Confidence 999998887 6799999999999742 467778899999999999999885
|
|
| >TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.5e-13 Score=120.41 Aligned_cols=246 Identities=10% Similarity=0.011 Sum_probs=135.7
Q ss_pred cccCCCCccccccCcceeeeccccCCCCCcEEEEEEecCCCccccccCCcccCCCCcccCCCCCeee-eeccccCCCCce
Q psy4579 54 SVQLPNEDAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQF-DASNYDTDKGGY 132 (368)
Q Consensus 54 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~-~~~~~~h~~~v~ 132 (368)
.+++++.|+.+.+|+ ...+...........+..+.+.+++..+.+.. ..++.|.+|+..... ...+..+ ..+.
T Consensus 3 ~~~s~~~d~~v~~~d--~~t~~~~~~~~~~~~~~~l~~~~dg~~l~~~~---~~~~~v~~~d~~~~~~~~~~~~~-~~~~ 76 (300)
T TIGR03866 3 AYVSNEKDNTISVID--TATLEVTRTFPVGQRPRGITLSKDGKLLYVCA---SDSDTIQVIDLATGEVIGTLPSG-PDPE 76 (300)
T ss_pred EEEEecCCCEEEEEE--CCCCceEEEEECCCCCCceEECCCCCEEEEEE---CCCCeEEEEECCCCcEEEeccCC-CCcc
Confidence 456677788775554 33332222111111123455544443332222 347899999987533 3333333 3457
Q ss_pred eeEecCCCCCee-EEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCC-cEEEEE
Q psy4579 133 GLSWNPSLNGYL-LSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDH-TICLWD 210 (368)
Q Consensus 133 ~l~~sp~~~~~l-asg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg-~i~iwd 210 (368)
.++|+|++ +.+ ++++.|+.+++||+.+.. .+..+..+ ..+. +++|+|+ +.++++++.++ .+.+||
T Consensus 77 ~~~~~~~g-~~l~~~~~~~~~l~~~d~~~~~-------~~~~~~~~-~~~~---~~~~~~d-g~~l~~~~~~~~~~~~~d 143 (300)
T TIGR03866 77 LFALHPNG-KILYIANEDDNLVTVIDIETRK-------VLAEIPVG-VEPE---GMAVSPD-GKIVVNTSETTNMAHFID 143 (300)
T ss_pred EEEECCCC-CEEEEEcCCCCeEEEEECCCCe-------EEeEeeCC-CCcc---eEEECCC-CCEEEEEecCCCeEEEEe
Confidence 88999998 655 555678999999998753 23334322 2233 8999998 88888888775 467789
Q ss_pred CCCCCCCCccccceeeeecccccEeEEEEee---ecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCC
Q psy4579 211 INATPKENRVIDAKTIFTGHTAVVEDYSIHR---LILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSV 287 (368)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~---~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 287 (368)
.++.. ...... .......++|++ .++.++..+ +.+.+|+..
T Consensus 144 ~~~~~-------~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~----------------------------~~v~i~d~~ 187 (300)
T TIGR03866 144 TKTYE-------IVDNVL-VDQRPRFAEFTADGKELWVSSEIG----------------------------GTVSVIDVA 187 (300)
T ss_pred CCCCe-------EEEEEE-cCCCccEEEECCCCCEEEEEcCCC----------------------------CEEEEEEcC
Confidence 87652 122221 112334566653 111121112 223333443
Q ss_pred CCceeeeeec----Cccc--ceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeecccCceeeecc
Q psy4579 288 SGKIEIEIKI----NHEG--EVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGT 361 (368)
Q Consensus 288 ~~~~~~~~~~----~h~~--~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w 361 (368)
+++....+.. .+.. ....++|+|++..++++.+.++.+.+||++. ......+ .+...+.+++|
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~~~~~i~v~d~~~----------~~~~~~~-~~~~~~~~~~~ 256 (300)
T TIGR03866 188 TRKVIKKITFEIPGVHPEAVQPVGIKLTKDGKTAFVALGPANRVAVVDAKT----------YEVLDYL-LVGQRVWQLAF 256 (300)
T ss_pred cceeeeeeeecccccccccCCccceEECCCCCEEEEEcCCCCeEEEEECCC----------CcEEEEE-EeCCCcceEEE
Confidence 4433322210 0111 2346889999976666666778899999864 2222222 34457889999
Q ss_pred eeee
Q psy4579 362 YNCY 365 (368)
Q Consensus 362 ~p~~ 365 (368)
+|..
T Consensus 257 ~~~g 260 (300)
T TIGR03866 257 TPDE 260 (300)
T ss_pred CCCC
Confidence 9874
|
Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol. |
| >COG2319 FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.57 E-value=5.9e-13 Score=121.77 Aligned_cols=262 Identities=21% Similarity=0.272 Sum_probs=173.2
Q ss_pred cccccCceeeEecCCcccccCCCCccccccCcceeee-ccccCCCCCcEEEEEEec-CCCcc-ccccCCcccCCCCcccC
Q psy4579 37 HALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDK-GTHTSDEQNHLLIASVQL-PNEDA-QFDASNYDTDKGGNVQL 113 (368)
Q Consensus 37 ~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~-~~~~~-~~~~~~~~~~~~g~i~i 113 (368)
......+.++.+.+.+..++.++.++.+.+|.+.... ............+..+.. ..... .+.... ..++.+.+
T Consensus 62 ~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~d~~~~~ 138 (466)
T COG2319 62 RGHEDSITSIAFSPDGELLLSGSSDGTIKLWDLDNGEKLIKSLEGLHDSSVSKLALSSPDGNSILLASS---SLDGTVKL 138 (466)
T ss_pred eeccceEEEEEECCCCcEEEEecCCCcEEEEEcCCCceeEEEEeccCCCceeeEEEECCCcceEEeccC---CCCccEEE
Confidence 3456678899999999999999888888666655443 111111111122333333 22222 122112 34889999
Q ss_pred CCCCe--eeeeccccCCCCceeeEecCCCCCeeEEEeC-CCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEe
Q psy4579 114 PNEDA--QFDASNYDTDKGGYGLSWNPSLNGYLLSASD-DHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWN 190 (368)
Q Consensus 114 ~~~~~--~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~-dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~ 190 (368)
|+... ........|...|.+++|+|++ ..+++++. |+.+++|++.... ....+.+|...+. +++|+
T Consensus 139 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~v~---~~~~~ 207 (466)
T COG2319 139 WDLSTPGKLIRTLEGHSESVTSLAFSPDG-KLLASGSSLDGTIKLWDLRTGK-------PLSTLAGHTDPVS---SLAFS 207 (466)
T ss_pred EEecCCCeEEEEEecCcccEEEEEECCCC-CEEEecCCCCCceEEEEcCCCc-------eEEeeccCCCceE---EEEEc
Confidence 99885 7777888999999999999998 78888885 9999999998743 4677888999996 99999
Q ss_pred CCCCC-eEEEeeCCCcEEEEECCCCCCCCcccccee-eeecccccEeEEEEeee--cccccCCCCccceEEEEeecCCcc
Q psy4579 191 PSLNG-YLLSASDDHTICLWDINATPKENRVIDAKT-IFTGHTAVVEDYSIHRL--ILGTHTSDEQNHLLIASVQLPNED 266 (368)
Q Consensus 191 p~~~~-~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~v~~v~~~~~--~~~~~~~d~~~~~~~~~~~~~~~~ 266 (368)
|+ +. .+++++.|+.|++||...+ .... .+.+|.... ...|.+. .+.+++.++..++|
T Consensus 208 ~~-~~~~~~~~~~d~~i~~wd~~~~-------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~---------- 268 (466)
T COG2319 208 PD-GGLLIASGSSDGTIRLWDLSTG-------KLLRSTLSGHSDSV-VSSFSPDGSLLASGSSDGTIRLW---------- 268 (466)
T ss_pred CC-cceEEEEecCCCcEEEEECCCC-------cEEeeecCCCCcce-eEeECCCCCEEEEecCCCcEEEe----------
Confidence 88 65 6666699999999988744 2233 466666653 2245431 22233333333333
Q ss_pred cccccccccCCCCCcccccCCCCce-eeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCC
Q psy4579 267 AQFDASNYDTDKGDFGGFGSVSGKI-EIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHP 345 (368)
Q Consensus 267 ~~~~~~~~d~~~~~~~~~~~~~~~~-~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~ 345 (368)
+...... .... .+|...|.++.|+|++. .+++++.|+.+++||.+... .
T Consensus 269 ------------------~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~----------~ 318 (466)
T COG2319 269 ------------------DLRSSSSLLRTL-SGHSSSVLSVAFSPDGK-LLASGSSDGTVRLWDLETGK----------L 318 (466)
T ss_pred ------------------eecCCCcEEEEE-ecCCccEEEEEECCCCC-EEEEeeCCCcEEEEEcCCCc----------e
Confidence 2222222 2222 47899999999999774 44458888999999887522 1
Q ss_pred ceee--ecccCceeeecc
Q psy4579 346 DLRL--RGHQKEGLIEGT 361 (368)
Q Consensus 346 ~~~~--~gh~~~V~~l~w 361 (368)
.... .+|...+..+.|
T Consensus 319 ~~~~~~~~~~~~~~~~~~ 336 (466)
T COG2319 319 LSSLTLKGHEGPVSSLSF 336 (466)
T ss_pred EEEeeecccCCceEEEEE
Confidence 1122 367777888887
|
|
| >KOG1034|consensus | Back alignment and domain information |
|---|
Probab=99.55 E-value=2.8e-14 Score=117.80 Aligned_cols=122 Identities=23% Similarity=0.393 Sum_probs=102.7
Q ss_pred cCCCCceeeEecCC---CCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeC
Q psy4579 126 DTDKGGYGLSWNPS---LNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASD 202 (368)
Q Consensus 126 ~h~~~v~~l~~sp~---~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~ 202 (368)
.|....+.++|+-+ ++-++|.|+.-|.|+|.|+.++. ....+.+|...|+ .|.++|...++++++|.
T Consensus 87 d~~Esfytcsw~yd~~~~~p~la~~G~~GvIrVid~~~~~-------~~~~~~ghG~sIN---eik~~p~~~qlvls~Sk 156 (385)
T KOG1034|consen 87 DHDESFYTCSWSYDSNTGNPFLAAGGYLGVIRVIDVVSGQ-------CSKNYRGHGGSIN---EIKFHPDRPQLVLSASK 156 (385)
T ss_pred CCCcceEEEEEEecCCCCCeeEEeecceeEEEEEecchhh-------hccceeccCccch---hhhcCCCCCcEEEEecC
Confidence 47778888899754 33589999999999999999875 5678999999997 99999998899999999
Q ss_pred CCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeeecccccCCCCccceEEEEeecCCcccccccccccCCCCCcc
Q psy4579 203 DHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFG 282 (368)
Q Consensus 203 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 282 (368)
|.+|++|++++. .++..|.|
T Consensus 157 D~svRlwnI~~~-------~Cv~VfGG----------------------------------------------------- 176 (385)
T KOG1034|consen 157 DHSVRLWNIQTD-------VCVAVFGG----------------------------------------------------- 176 (385)
T ss_pred CceEEEEeccCC-------eEEEEecc-----------------------------------------------------
Confidence 999999999886 23332221
Q ss_pred cccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECC
Q psy4579 283 GFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYT 331 (368)
Q Consensus 283 ~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~ 331 (368)
. .+|.+.|.++.|++++. .|+|++.|.++++|++.
T Consensus 177 ------------~-egHrdeVLSvD~~~~gd-~i~ScGmDhslk~W~l~ 211 (385)
T KOG1034|consen 177 ------------V-EGHRDEVLSVDFSLDGD-RIASCGMDHSLKLWRLN 211 (385)
T ss_pred ------------c-ccccCcEEEEEEcCCCC-eeeccCCcceEEEEecC
Confidence 0 28999999999999995 78899999999999998
|
|
| >KOG0771|consensus | Back alignment and domain information |
|---|
Probab=99.55 E-value=5.9e-14 Score=119.58 Aligned_cols=185 Identities=16% Similarity=0.158 Sum_probs=120.8
Q ss_pred eeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEEC
Q psy4579 132 YGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDI 211 (368)
Q Consensus 132 ~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~ 211 (368)
.+++|+++| ..|++|+.||++|||+..... .+.....|.+.|. ++.|+|+ +.+|++-+.| ..+||+.
T Consensus 148 k~vaf~~~g-s~latgg~dg~lRv~~~Ps~~-------t~l~e~~~~~eV~---DL~FS~d-gk~lasig~d-~~~VW~~ 214 (398)
T KOG0771|consen 148 KVVAFNGDG-SKLATGGTDGTLRVWEWPSML-------TILEEIAHHAEVK---DLDFSPD-GKFLASIGAD-SARVWSV 214 (398)
T ss_pred eEEEEcCCC-CEeeeccccceEEEEecCcch-------hhhhhHhhcCccc---cceeCCC-CcEEEEecCC-ceEEEEe
Confidence 689999999 999999999999999976543 4567788999997 9999999 9999999999 9999999
Q ss_pred CCCCCCCccccceeeee--cccccEeEEEEeeecccccCCCCccceEEEEeecCCc-ccccccccccCCCCCcccccCCC
Q psy4579 212 NATPKENRVIDAKTIFT--GHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNE-DAQFDASNYDTDKGDFGGFGSVS 288 (368)
Q Consensus 212 ~~~~~~~~~~~~~~~~~--~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~ 288 (368)
+++.. +.... ........+.|. .... + ..+.++....+.. ........|+..
T Consensus 215 ~~g~~-------~a~~t~~~k~~~~~~cRF~-----~d~~-~-~~l~laa~~~~~~~v~~~~~~~w~~~----------- 269 (398)
T KOG0771|consen 215 NTGAA-------LARKTPFSKDEMFSSCRFS-----VDNA-Q-ETLRLAASQFPGGGVRLCDISLWSGS----------- 269 (398)
T ss_pred ccCch-------hhhcCCcccchhhhhceec-----ccCC-C-ceEEEEEecCCCCceeEEEeeeeccc-----------
Confidence 98722 11111 011111222221 1111 1 2233333322221 112222223211
Q ss_pred CceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCcee-eecccCceeeecceeee
Q psy4579 289 GKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLR-LRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 289 ~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~-~~gh~~~V~~l~w~p~~ 365 (368)
..............|++++.+++| .++|.|+.||.|.|++... .+.+.. -..|...|++|.|+|.-
T Consensus 270 ~~l~~~~~~~~~~siSsl~VS~dG-kf~AlGT~dGsVai~~~~~----------lq~~~~vk~aH~~~VT~ltF~Pds 336 (398)
T KOG0771|consen 270 NFLRLRKKIKRFKSISSLAVSDDG-KFLALGTMDGSVAIYDAKS----------LQRLQYVKEAHLGFVTGLTFSPDS 336 (398)
T ss_pred cccchhhhhhccCcceeEEEcCCC-cEEEEeccCCcEEEEEece----------eeeeEeehhhheeeeeeEEEcCCc
Confidence 000111111345689999999999 7999999999999999975 222222 25799999999999963
|
|
| >KOG1334|consensus | Back alignment and domain information |
|---|
Probab=99.54 E-value=7.6e-14 Score=120.90 Aligned_cols=296 Identities=10% Similarity=0.064 Sum_probs=182.8
Q ss_pred cccccCceeeEecCCcccccCCCCccccccCcceeeeccccCCCCCcEEE-EEEecCCCccccccCCcccCCCCcccCCC
Q psy4579 37 HALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQNHLLI-ASVQLPNEDAQFDASNYDTDKGGNVQLPN 115 (368)
Q Consensus 37 ~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~~~~~~~~~~~~~~~~g~i~i~~ 115 (368)
..++..+.+|.|...|+.|++||+|..+.+|+|......+.........| ..-.+|..+..-.+. .+.||.+++-.
T Consensus 139 ~~H~GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~---~s~dgqvr~s~ 215 (559)
T KOG1334|consen 139 NKHKGCVNTVHFNQRGDVLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFSGDRTIVT---SSRDGQVRVSE 215 (559)
T ss_pred cCCCCccceeeecccCceeeccCccceEEeehhhccCcccccccccccchhhhhccCCCCCcCcee---ccccCceeeee
Confidence 34567799999999999999999999999999876655444432222222 222445544332222 24689888754
Q ss_pred CC--eee--eeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeecccc-ceecceeeEEe
Q psy4579 116 ED--AQF--DASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTA-VVEVRYGLSWN 190 (368)
Q Consensus 116 ~~--~~~--~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~-~v~~~~~i~~~ 190 (368)
+. +.. ...+..|.++|.-++.-|+.+..|.+++.|+.+.-.|++....... ...-..+.. .|. .++|+..
T Consensus 216 i~~t~~~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~----~~cr~~~~~~~v~-L~~Ia~~ 290 (559)
T KOG1334|consen 216 ILETGYVENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEK----FVCREADEKERVG-LYTIAVD 290 (559)
T ss_pred eccccceecceecccccCccceeeecCCCCCcccccccccceeeeeeccCCccce----eeeeccCCcccee-eeeEecC
Confidence 43 222 3456779999999999999999999999999999999987643211 111122222 132 2589999
Q ss_pred CCCCCeEEEeeCCCcEEEEECCCCCCCCc-----cccceeeeecccccEeEEEEe--eecccccCCCCccceEEEEeecC
Q psy4579 191 PSLNGYLLSASDDHTICLWDINATPKENR-----VIDAKTIFTGHTAVVEDYSIH--RLILGTHTSDEQNHLLIASVQLP 263 (368)
Q Consensus 191 p~~~~~l~s~s~dg~i~iwd~~~~~~~~~-----~~~~~~~~~~~~~~v~~v~~~--~~~~~~~~~d~~~~~~~~~~~~~ 263 (368)
|...+.+++|+.|..+++||.+.-.+... .+.+..........|++++|+ +--+.+...|..++++--.+.
T Consensus 291 P~nt~~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ysh~~sElLaSYnDe~IYLF~~~~~-- 368 (559)
T KOG1334|consen 291 PRNTNEFAVGGSDQFARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNITGLVYSHDGSELLASYNDEDIYLFNKSMG-- 368 (559)
T ss_pred CCCccccccCChhhhhhhhcccchhhccccchhhhcCCccccccCcccceeEEecCCccceeeeecccceEEeccccc--
Confidence 98777999999999999999987644311 111111122233457788886 222222223333444311111
Q ss_pred CcccccccccccCCCCCcccccCCCCceeeeeecCccc--ceeEEEEe-CCCCcEEEEecCCCeEEEEECCCCCCCCCCC
Q psy4579 264 NEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEG--EVNRARYM-PQNPCVIATKTPSSDVLVFDYTKHPSKPDPN 340 (368)
Q Consensus 264 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~--~i~~~~~~-p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~ 340 (368)
......... .+ .......+.+|.. .|..+-|- |.. .++++||.=|.|.||+...
T Consensus 369 ~G~~p~~~s-------------~~-~~~~k~vYKGHrN~~TVKgVNFfGPrs-EyVvSGSDCGhIFiW~K~t-------- 425 (559)
T KOG1334|consen 369 DGSEPDPSS-------------PR-EQYVKRVYKGHRNSRTVKGVNFFGPRS-EYVVSGSDCGHIFIWDKKT-------- 425 (559)
T ss_pred cCCCCCCCc-------------ch-hhccchhhcccccccccceeeeccCcc-ceEEecCccceEEEEecch--------
Confidence 000000000 00 0111222347754 67778764 566 5777999999999999875
Q ss_pred CCCCCceeeecccCceeeecceeeeec
Q psy4579 341 GECHPDLRLRGHQKEGLIEGTYNCYLQ 367 (368)
Q Consensus 341 ~~~~~~~~~~gh~~~V~~l~w~p~~~~ 367 (368)
+..+..+.|-...|+||.-||.++-
T Consensus 426 --~eii~~MegDr~VVNCLEpHP~~Pv 450 (559)
T KOG1334|consen 426 --GEIIRFMEGDRHVVNCLEPHPHLPV 450 (559)
T ss_pred --hHHHHHhhcccceEeccCCCCCCch
Confidence 4444455665669999999998753
|
|
| >KOG1523|consensus | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.2e-12 Score=107.95 Aligned_cols=230 Identities=16% Similarity=0.216 Sum_probs=159.2
Q ss_pred cccccCceeeEecCCcccccCCCCccccccCcceeeeccccCCCCCcEEEEEEecCCCccccccCCcccCCCCcccCCCC
Q psy4579 37 HALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNE 116 (368)
Q Consensus 37 ~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~ 116 (368)
+-+.-|+.|.+|.+|.+.+|++-....+ ..|+... . .+|
T Consensus 7 ~~~~~pitchAwn~drt~iAv~~~~~ev--hiy~~~~---------------------------~----------~~w-- 45 (361)
T KOG1523|consen 7 HRLLEPITCHAWNSDRTQIAVSPNNHEV--HIYSMLG---------------------------A----------DLW-- 45 (361)
T ss_pred eeccCceeeeeecCCCceEEeccCCceE--EEEEecC---------------------------C----------CCc--
Confidence 3456799999999999988876554333 1111100 0 011
Q ss_pred CeeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCe
Q psy4579 117 DAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGY 196 (368)
Q Consensus 117 ~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~ 196 (368)
+...++..|...|++++|+|.. +.|++|+.|..-++|....+.. .++..++..+.+.++ ++.|+|. ++.
T Consensus 46 --~~~htls~Hd~~vtgvdWap~s-nrIvtcs~drnayVw~~~~~~~----WkptlvLlRiNrAAt---~V~WsP~-enk 114 (361)
T KOG1523|consen 46 --EPAHTLSEHDKIVTGVDWAPKS-NRIVTCSHDRNAYVWTQPSGGT----WKPTLVLLRINRAAT---CVKWSPK-ENK 114 (361)
T ss_pred --eeceehhhhCcceeEEeecCCC-CceeEccCCCCccccccCCCCe----eccceeEEEecccee---eEeecCc-Cce
Confidence 2335667799999999999998 8999999999999999844322 346677888888886 9999999 999
Q ss_pred EEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee--ecccccCCCCccceEEEEeecCCcccccccccc
Q psy4579 197 LLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LILGTHTSDEQNHLLIASVQLPNEDAQFDASNY 274 (368)
Q Consensus 197 l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 274 (368)
||+||....|.||-++.... -+.....-+.+...|.+++|++ .+++.++.|...+++-.-+.- -+..-....|
T Consensus 115 FAVgSgar~isVcy~E~ENd---WWVsKhikkPirStv~sldWhpnnVLlaaGs~D~k~rVfSayIK~--Vdekpap~pW 189 (361)
T KOG1523|consen 115 FAVGSGARLISVCYYEQEND---WWVSKHIKKPIRSTVTSLDWHPNNVLLAAGSTDGKCRVFSAYIKG--VDEKPAPTPW 189 (361)
T ss_pred EEeccCccEEEEEEEecccc---eehhhhhCCccccceeeeeccCCcceecccccCcceeEEEEeeec--cccCCCCCCC
Confidence 99999999999998876521 2222333345678899999986 578888888888876433210 0000011222
Q ss_pred cCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCC
Q psy4579 275 DTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKH 333 (368)
Q Consensus 275 d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~ 333 (368)
+.+. .-|.+..+.. ...+.|..+.|+|+| ..|+-.+.|.++.+=|....
T Consensus 190 gsk~--------PFG~lm~E~~-~~ggwvh~v~fs~sG-~~lawv~Hds~v~~~da~~p 238 (361)
T KOG1523|consen 190 GSKM--------PFGQLMSEAS-SSGGWVHGVLFSPSG-NRLAWVGHDSTVSFVDAAGP 238 (361)
T ss_pred ccCC--------cHHHHHHhhc-cCCCceeeeEeCCCC-CEeeEecCCCceEEeecCCC
Confidence 2221 1133333332 456789999999999 68889999999999998753
|
|
| >KOG1523|consensus | Back alignment and domain information |
|---|
Probab=99.51 E-value=4.1e-13 Score=110.63 Aligned_cols=200 Identities=13% Similarity=0.161 Sum_probs=140.1
Q ss_pred CCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcE
Q psy4579 127 TDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTI 206 (368)
Q Consensus 127 h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i 206 (368)
-.++|+|.+|++++ ..+|.+.....|.||....... .++.++++.|...|+ +|+|+|. .+.|++|+.|..-
T Consensus 9 ~~~pitchAwn~dr-t~iAv~~~~~evhiy~~~~~~~----w~~~htls~Hd~~vt---gvdWap~-snrIvtcs~drna 79 (361)
T KOG1523|consen 9 LLEPITCHAWNSDR-TQIAVSPNNHEVHIYSMLGADL----WEPAHTLSEHDKIVT---GVDWAPK-SNRIVTCSHDRNA 79 (361)
T ss_pred ccCceeeeeecCCC-ceEEeccCCceEEEEEecCCCC----ceeceehhhhCccee---EEeecCC-CCceeEccCCCCc
Confidence 34789999999998 9999999999999999876542 236789999999997 9999998 8999999999999
Q ss_pred EEEECCCCCCCCccccceeeeecccccEeEEEEee--ecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccc
Q psy4579 207 CLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGF 284 (368)
Q Consensus 207 ~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 284 (368)
.+|....+. .+.+...+..+....++|.|.| +.++.+++...+.++-.. .+..-+.
T Consensus 80 yVw~~~~~~----~WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E----~ENdWWV-------------- 137 (361)
T KOG1523|consen 80 YVWTQPSGG----TWKPTLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYYE----QENDWWV-------------- 137 (361)
T ss_pred cccccCCCC----eeccceeEEEeccceeeEeecCcCceEEeccCccEEEEEEEe----cccceeh--------------
Confidence 999885443 3556666777888999999986 455665554333332221 1111110
Q ss_pred cCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECC--CCCCCCCCC--CCCCC----ceeeecccCce
Q psy4579 285 GSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYT--KHPSKPDPN--GECHP----DLRLRGHQKEG 356 (368)
Q Consensus 285 ~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~--~~~~~~~~~--~~~~~----~~~~~gh~~~V 356 (368)
...++..+...|+++.|+|++ -+||+||.|+..|+|..- ....++.+. +...| +..+....+-|
T Consensus 138 -------sKhikkPirStv~sldWhpnn-VLlaaGs~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwv 209 (361)
T KOG1523|consen 138 -------SKHIKKPIRSTVTSLDWHPNN-VLLAAGSTDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWV 209 (361)
T ss_pred -------hhhhCCccccceeeeeccCCc-ceecccccCcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhccCCCce
Confidence 011233678899999999999 899999999999999742 222222211 11111 11222445677
Q ss_pred eeecceeee
Q psy4579 357 LIEGTYNCY 365 (368)
Q Consensus 357 ~~l~w~p~~ 365 (368)
.++.|+|..
T Consensus 210 h~v~fs~sG 218 (361)
T KOG1523|consen 210 HGVLFSPSG 218 (361)
T ss_pred eeeEeCCCC
Confidence 788888655
|
|
| >KOG1272|consensus | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.8e-14 Score=123.94 Aligned_cols=196 Identities=13% Similarity=0.123 Sum_probs=149.2
Q ss_pred CceeeEecCCcccccCCCCccccccCcceeeeccccCCCCCcEEEEEEecCCCccccccCCcccCCCCcccCCCCCeeee
Q psy4579 42 PSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQFD 121 (368)
Q Consensus 42 ~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~ 121 (368)
-...++|+.+|++++.|+..|.+...+| .++....+..-...|.++.|-.....+.++. ...+.+||.++..+
T Consensus 131 GPY~~~ytrnGrhlllgGrKGHlAa~Dw--~t~~L~~Ei~v~Etv~Dv~~LHneq~~AVAQ-----K~y~yvYD~~GtEl 203 (545)
T KOG1272|consen 131 GPYHLDYTRNGRHLLLGGRKGHLAAFDW--VTKKLHFEINVMETVRDVTFLHNEQFFAVAQ-----KKYVYVYDNNGTEL 203 (545)
T ss_pred CCeeeeecCCccEEEecCCccceeeeec--ccceeeeeeehhhhhhhhhhhcchHHHHhhh-----hceEEEecCCCcEE
Confidence 3455899999999999999999955555 4443333332233456666644444333333 56788999999888
Q ss_pred eccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEee
Q psy4579 122 ASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSAS 201 (368)
Q Consensus 122 ~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s 201 (368)
.++..| ..|..+.|-|-. -+|++++..|.++--|+.+++ .+..+..-.+.+. .++-+|- +..+-+|.
T Consensus 204 HClk~~-~~v~rLeFLPyH-fLL~~~~~~G~L~Y~DVS~Gk-------lVa~~~t~~G~~~---vm~qNP~-NaVih~Gh 270 (545)
T KOG1272|consen 204 HCLKRH-IRVARLEFLPYH-FLLVAASEAGFLKYQDVSTGK-------LVASIRTGAGRTD---VMKQNPY-NAVIHLGH 270 (545)
T ss_pred eehhhc-Cchhhhcccchh-heeeecccCCceEEEeechhh-------hhHHHHccCCccc---hhhcCCc-cceEEEcC
Confidence 888766 478999999998 899999999999999999985 4455555566664 7888998 88899999
Q ss_pred CCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeeecccccCCCCccceEEEEeecCCcccccccccccCCCCCc
Q psy4579 202 DDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDF 281 (368)
Q Consensus 202 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 281 (368)
..|+|.+|...... |+
T Consensus 271 snGtVSlWSP~ske-------PL--------------------------------------------------------- 286 (545)
T KOG1272|consen 271 SNGTVSLWSPNSKE-------PL--------------------------------------------------------- 286 (545)
T ss_pred CCceEEecCCCCcc-------hH---------------------------------------------------------
Confidence 99999999876541 11
Q ss_pred ccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCC
Q psy4579 282 GGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHP 334 (368)
Q Consensus 282 ~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~ 334 (368)
..+ ..|.++|.++++.+.| +++||.+.|..++|||+|...
T Consensus 287 -----------vKi-LcH~g~V~siAv~~~G-~YMaTtG~Dr~~kIWDlR~~~ 326 (545)
T KOG1272|consen 287 -----------VKI-LCHRGPVSSIAVDRGG-RYMATTGLDRKVKIWDLRNFY 326 (545)
T ss_pred -----------HHH-HhcCCCcceEEECCCC-cEEeecccccceeEeeecccc
Confidence 111 2799999999999999 789999999999999999743
|
|
| >KOG1274|consensus | Back alignment and domain information |
|---|
Probab=99.50 E-value=8.7e-13 Score=122.50 Aligned_cols=192 Identities=16% Similarity=0.217 Sum_probs=127.9
Q ss_pred cccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCC
Q psy4579 124 NYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDD 203 (368)
Q Consensus 124 ~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~d 203 (368)
.+.|...-+.|+|.|+| ..|.+++.||.|++|+....... |.. +.-+...+. +++-. +++|++|+.+
T Consensus 9 Ryaht~G~t~i~~d~~g-efi~tcgsdg~ir~~~~~sd~e~-----P~t-i~~~g~~v~---~ia~~---s~~f~~~s~~ 75 (933)
T KOG1274|consen 9 RYAHTGGLTLICYDPDG-EFICTCGSDGDIRKWKTNSDEEE-----PET-IDISGELVS---SIACY---SNHFLTGSEQ 75 (933)
T ss_pred hhhccCceEEEEEcCCC-CEEEEecCCCceEEeecCCcccC-----Cch-hhccCceeE---EEeec---ccceEEeecc
Confidence 35788999999999999 79999999999999998765322 111 111555552 55542 6799999999
Q ss_pred CcEEEEECCCCCCCCccccceeeeecccccEeEEEEee--ecccccCCCCccceEEEEeecCCcccccccccccCCCCCc
Q psy4579 204 HTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDF 281 (368)
Q Consensus 204 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 281 (368)
++|++|.+..+... ..+...+-++++++++. ..++.++.|-.+++.
T Consensus 76 ~tv~~y~fps~~~~-------~iL~Rftlp~r~~~v~g~g~~iaagsdD~~vK~~------------------------- 123 (933)
T KOG1274|consen 76 NTVLRYKFPSGEED-------TILARFTLPIRDLAVSGSGKMIAAGSDDTAVKLL------------------------- 123 (933)
T ss_pred ceEEEeeCCCCCcc-------ceeeeeeccceEEEEecCCcEEEeecCceeEEEE-------------------------
Confidence 99999999887432 23344556788888864 355555544333332
Q ss_pred ccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeecccCceeeecc
Q psy4579 282 GGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGT 361 (368)
Q Consensus 282 ~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w 361 (368)
++........++ +|.++|.++.|+|.+ .+||+.+-||.|++||+........-.+. .+...+ .-...+..++|
T Consensus 124 ---~~~D~s~~~~lr-gh~apVl~l~~~p~~-~fLAvss~dG~v~iw~~~~~~~~~tl~~v-~k~n~~-~~s~i~~~~aW 196 (933)
T KOG1274|consen 124 ---NLDDSSQEKVLR-GHDAPVLQLSYDPKG-NFLAVSSCDGKVQIWDLQDGILSKTLTGV-DKDNEF-ILSRICTRLAW 196 (933)
T ss_pred ---eccccchheeec-ccCCceeeeeEcCCC-CEEEEEecCceEEEEEcccchhhhhcccC-Cccccc-cccceeeeeee
Confidence 112233344455 899999999999999 79999999999999999753221110000 000000 01345567999
Q ss_pred eeeeec
Q psy4579 362 YNCYLQ 367 (368)
Q Consensus 362 ~p~~~~ 367 (368)
+|...|
T Consensus 197 ~Pk~g~ 202 (933)
T KOG1274|consen 197 HPKGGT 202 (933)
T ss_pred cCCCCe
Confidence 998654
|
|
| >KOG1538|consensus | Back alignment and domain information |
|---|
Probab=99.50 E-value=2.8e-13 Score=121.74 Aligned_cols=173 Identities=13% Similarity=0.158 Sum_probs=122.6
Q ss_pred CceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEE
Q psy4579 130 GGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLW 209 (368)
Q Consensus 130 ~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iw 209 (368)
.|..++|-|+| ..|+.+. +..+.+||.+.+. ...++++|.+.| ++++|+.+ +..+|||+.|..|.+|
T Consensus 14 ci~d~afkPDG-sqL~lAA-g~rlliyD~ndG~-------llqtLKgHKDtV---ycVAys~d-GkrFASG~aDK~VI~W 80 (1081)
T KOG1538|consen 14 CINDIAFKPDG-TQLILAA-GSRLLVYDTSDGT-------LLQPLKGHKDTV---YCVAYAKD-GKRFASGSADKSVIIW 80 (1081)
T ss_pred chheeEECCCC-ceEEEec-CCEEEEEeCCCcc-------cccccccccceE---EEEEEccC-CceeccCCCceeEEEe
Confidence 89999999999 5555543 4578999999875 578999999999 59999998 9999999999999999
Q ss_pred ECCCCCCCCccccceeeeecccccEeEEEEeee--cccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCC
Q psy4579 210 DINATPKENRVIDAKTIFTGHTAVVEDYSIHRL--ILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSV 287 (368)
Q Consensus 210 d~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~--~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 287 (368)
...-.. +..+ .|.+.|.|+.|+|. .+++++- ..+.+|...
T Consensus 81 ~~klEG--------~LkY-SH~D~IQCMsFNP~~h~LasCsL-----------------------------sdFglWS~~ 122 (1081)
T KOG1538|consen 81 TSKLEG--------ILKY-SHNDAIQCMSFNPITHQLASCSL-----------------------------SDFGLWSPE 122 (1081)
T ss_pred cccccc--------eeee-ccCCeeeEeecCchHHHhhhcch-----------------------------hhccccChh
Confidence 865431 2223 49999999999982 2333221 012223222
Q ss_pred CCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeecccCceeeecceeee
Q psy4579 288 SGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 288 ~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p~~ 365 (368)
...+ .+..-...|.+++|..+| .+|+.|-.||+|.+=+....+ ...+.+-.|..++|++++|+|+.
T Consensus 123 qK~V---~K~kss~R~~~CsWtnDG-qylalG~~nGTIsiRNk~gEe--------k~~I~Rpgg~Nspiwsi~~~p~s 188 (1081)
T KOG1538|consen 123 QKSV---SKHKSSSRIICCSWTNDG-QYLALGMFNGTISIRNKNGEE--------KVKIERPGGSNSPIWSICWNPSS 188 (1081)
T ss_pred hhhH---HhhhhheeEEEeeecCCC-cEEEEeccCceEEeecCCCCc--------ceEEeCCCCCCCCceEEEecCCC
Confidence 2211 111234678999999999 788899999999997654211 11122234678899999999874
|
|
| >KOG1310|consensus | Back alignment and domain information |
|---|
Probab=99.50 E-value=9.9e-14 Score=121.89 Aligned_cols=136 Identities=24% Similarity=0.326 Sum_probs=105.8
Q ss_pred eeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCC-CCeEEE
Q psy4579 121 DASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSL-NGYLLS 199 (368)
Q Consensus 121 ~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~-~~~l~s 199 (368)
...+.+|++.|+||.|+.+| .+|++||.|-.+.|||....+. ....-.||...| ++++|-|.- +.+++|
T Consensus 43 E~eL~GH~GCVN~LeWn~dG-~lL~SGSDD~r~ivWd~~~~Kl------lhsI~TgHtaNI---FsvKFvP~tnnriv~s 112 (758)
T KOG1310|consen 43 EAELTGHTGCVNCLEWNADG-ELLASGSDDTRLIVWDPFEYKL------LHSISTGHTANI---FSVKFVPYTNNRIVLS 112 (758)
T ss_pred hhhhccccceecceeecCCC-CEEeecCCcceEEeecchhcce------eeeeecccccce---eEEeeeccCCCeEEEe
Confidence 45678999999999999999 9999999999999999975432 223445899888 699999853 457899
Q ss_pred eeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeeecccccCCCCccceEEEEeecCCcccccccccccCCCC
Q psy4579 200 ASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKG 279 (368)
Q Consensus 200 ~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 279 (368)
|..|..|+++|+...... -..|.....
T Consensus 113 gAgDk~i~lfdl~~~~~~---------~~d~~~~~~-------------------------------------------- 139 (758)
T KOG1310|consen 113 GAGDKLIKLFDLDSSKEG---------GMDHGMEET-------------------------------------------- 139 (758)
T ss_pred ccCcceEEEEeccccccc---------ccccCccch--------------------------------------------
Confidence 999999999999764210 011111110
Q ss_pred CcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCC
Q psy4579 280 DFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
......|...|..++-.|++++.+-++++||+|+.+|++.
T Consensus 140 -------------~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiRE 179 (758)
T KOG1310|consen 140 -------------TRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIRE 179 (758)
T ss_pred -------------hhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccC
Confidence 1112378999999999999999999999999999999985
|
|
| >KOG1524|consensus | Back alignment and domain information |
|---|
Probab=99.49 E-value=3.6e-13 Score=118.12 Aligned_cols=164 Identities=15% Similarity=0.180 Sum_probs=120.0
Q ss_pred CeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccc
Q psy4579 142 GYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVI 221 (368)
Q Consensus 142 ~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 221 (368)
..|+.++.||.+.|-+-... ..+....|.+.+. +-.|+|+ +.-|+|+++||.|++|.-...
T Consensus 76 d~~~i~s~DGkf~il~k~~r--------VE~sv~AH~~A~~---~gRW~~d-GtgLlt~GEDG~iKiWSrsGM------- 136 (737)
T KOG1524|consen 76 DTLLICSNDGRFVILNKSAR--------VERSISAHAAAIS---SGRWSPD-GAGLLTAGEDGVIKIWSRSGM------- 136 (737)
T ss_pred ceEEEEcCCceEEEecccch--------hhhhhhhhhhhhh---hcccCCC-CceeeeecCCceEEEEeccch-------
Confidence 57889999999988764433 3467889999995 9999999 889999999999999975432
Q ss_pred cceeeeecccccEeEEEEeeecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCccc
Q psy4579 222 DAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEG 301 (368)
Q Consensus 222 ~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~ 301 (368)
...++.....+|+|++|.|. ...+.... .+++.+-.+.....++..+ +|++
T Consensus 137 -LRStl~Q~~~~v~c~~W~p~---------S~~vl~c~------------------g~h~~IKpL~~n~k~i~Wk-AHDG 187 (737)
T KOG1524|consen 137 -LRSTVVQNEESIRCARWAPN---------SNSIVFCQ------------------GGHISIKPLAANSKIIRWR-AHDG 187 (737)
T ss_pred -HHHHHhhcCceeEEEEECCC---------CCceEEec------------------CCeEEEeecccccceeEEe-ccCc
Confidence 23345556788999999762 01111110 0111111122233345555 8999
Q ss_pred ceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeecccCceeeecceeee
Q psy4579 302 EVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 302 ~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p~~ 365 (368)
-|.++.|+|.. .+++||++|-..++||-- ..++..-..|.-+|++++|+|.-
T Consensus 188 iiL~~~W~~~s-~lI~sgGED~kfKvWD~~-----------G~~Lf~S~~~ey~ITSva~npd~ 239 (737)
T KOG1524|consen 188 LVLSLSWSTQS-NIIASGGEDFRFKIWDAQ-----------GANLFTSAAEEYAITSVAFNPEK 239 (737)
T ss_pred EEEEeecCccc-cceeecCCceeEEeeccc-----------CcccccCChhccceeeeeecccc
Confidence 99999999999 799999999999999975 45656667899999999999963
|
|
| >PRK01742 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=9.1e-13 Score=121.14 Aligned_cols=224 Identities=14% Similarity=0.126 Sum_probs=136.3
Q ss_pred CCcccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCC---CcEEEEeCCCCCCCCcccccceeeeccccceecc
Q psy4579 108 GGNVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDD---HTICLWDINATPKENRVIDAKTIFTGHTAVVEVR 184 (368)
Q Consensus 108 ~g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~d---g~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~ 184 (368)
+..|.+||.++.....+..|...+.+.+|+|+| +.|+..+.+ ..|++||+.++... .+..+.+| ..
T Consensus 183 ~~~i~i~d~dg~~~~~lt~~~~~v~~p~wSPDG-~~la~~s~~~~~~~i~i~dl~tg~~~-----~l~~~~g~---~~-- 251 (429)
T PRK01742 183 PYEVRVADYDGFNQFIVNRSSQPLMSPAWSPDG-SKLAYVSFENKKSQLVVHDLRSGARK-----VVASFRGH---NG-- 251 (429)
T ss_pred eEEEEEECCCCCCceEeccCCCccccceEcCCC-CEEEEEEecCCCcEEEEEeCCCCceE-----EEecCCCc---cC--
Confidence 468999998876666667788899999999999 888877654 46999999876321 12223333 32
Q ss_pred eeeEEeCCCCCeEEEe-eCCCcEEEE--ECCCCCCCCccccceeeeecccccEeEEEEee---ecccccCCCCccceEEE
Q psy4579 185 YGLSWNPSLNGYLLSA-SDDHTICLW--DINATPKENRVIDAKTIFTGHTAVVEDYSIHR---LILGTHTSDEQNHLLIA 258 (368)
Q Consensus 185 ~~i~~~p~~~~~l~s~-s~dg~i~iw--d~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~---~~~~~~~~d~~~~~~~~ 258 (368)
.++|+|+ +..|+.+ +.+|.+.|| |+.++. ...+..+...+....|+| .++.+...++...+|..
T Consensus 252 -~~~wSPD-G~~La~~~~~~g~~~Iy~~d~~~~~--------~~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~ 321 (429)
T PRK01742 252 -APAFSPD-GSRLAFASSKDGVLNIYVMGANGGT--------PSQLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRM 321 (429)
T ss_pred -ceeECCC-CCEEEEEEecCCcEEEEEEECCCCC--------eEeeccCCCCcCCEEECCCCCEEEEEECCCCCceEEEE
Confidence 7899999 7776665 578877666 554432 233444555677788876 23333334455566654
Q ss_pred EeecCCc----ccccccccccCCC--------CCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEE
Q psy4579 259 SVQLPNE----DAQFDASNYDTDK--------GDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVL 326 (368)
Q Consensus 259 ~~~~~~~----~~~~~~~~~d~~~--------~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~ 326 (368)
...-... .... ...+.+.. ..+..++..+++...... .+ ....+.|+|++ ..|+.++.++.+.
T Consensus 322 ~~~~~~~~~l~~~~~-~~~~SpDG~~ia~~~~~~i~~~Dl~~g~~~~lt~-~~--~~~~~~~sPdG-~~i~~~s~~g~~~ 396 (429)
T PRK01742 322 SASGGGASLVGGRGY-SAQISADGKTLVMINGDNVVKQDLTSGSTEVLSS-TF--LDESPSISPNG-IMIIYSSTQGLGK 396 (429)
T ss_pred ECCCCCeEEecCCCC-CccCCCCCCEEEEEcCCCEEEEECCCCCeEEecC-CC--CCCCceECCCC-CEEEEEEcCCCce
Confidence 3210000 0000 01111111 123335665555432211 11 23567899999 5676778899888
Q ss_pred EEECCCCCCCCCCCCCCCCceeeecccCceeeecceeee
Q psy4579 327 VFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 327 iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p~~ 365 (368)
+|++-.. .......+.+|.+.+...+|||.+
T Consensus 397 ~l~~~~~--------~G~~~~~l~~~~g~~~~p~wsp~~ 427 (429)
T PRK01742 397 VLQLVSA--------DGRFKARLPGSDGQVKFPAWSPYL 427 (429)
T ss_pred EEEEEEC--------CCCceEEccCCCCCCCCcccCCCC
Confidence 8886421 134455677899999999999975
|
|
| >KOG0322|consensus | Back alignment and domain information |
|---|
Probab=99.49 E-value=3.7e-13 Score=108.04 Aligned_cols=77 Identities=14% Similarity=0.176 Sum_probs=61.5
Q ss_pred ccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeee-ccccceecceeeEEeCCCCCeEEEee
Q psy4579 123 SNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFT-GHTAVVEVRYGLSWNPSLNGYLLSAS 201 (368)
Q Consensus 123 ~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~i~~~p~~~~~l~s~s 201 (368)
.+.+|...|+++.|-.++ +|.+|..-|.|++|++.+.. ....+. .|+..++ .+.--| +..+.+-+
T Consensus 9 vLRp~~~~v~s~~fqa~~--rL~sg~~~G~V~~w~lqt~r-------~~~~~r~~g~~~it---~lq~~p--~d~l~tqg 74 (323)
T KOG0322|consen 9 VLRPHSSSVTSVLFQANE--RLMSGLSVGIVKMWVLQTER-------DLPLIRLFGRLFIT---NLQSIP--NDSLDTQG 74 (323)
T ss_pred Eeccccchheehhhccch--hhhcccccceEEEEEeecCc-------cchhhhhhccceee---ceeecC--CcchhhcC
Confidence 344899999999999875 59999999999999998865 345555 3555564 777777 46688999
Q ss_pred CCCcEEEEECCC
Q psy4579 202 DDHTICLWDINA 213 (368)
Q Consensus 202 ~dg~i~iwd~~~ 213 (368)
.|+.+.+|++..
T Consensus 75 Rd~~L~lw~ia~ 86 (323)
T KOG0322|consen 75 RDPLLILWTIAY 86 (323)
T ss_pred CCceEEEEEccC
Confidence 999999999876
|
|
| >KOG2394|consensus | Back alignment and domain information |
|---|
Probab=99.48 E-value=7e-13 Score=116.34 Aligned_cols=97 Identities=14% Similarity=0.344 Sum_probs=82.5
Q ss_pred CCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEE
Q psy4579 128 DKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTIC 207 (368)
Q Consensus 128 ~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~ 207 (368)
++.|+.++|+||| .+||+.+.||.+||||..+.. .....+..-+.. +|++|+|| +.+|++|++|..|.
T Consensus 290 ~g~in~f~FS~DG-~~LA~VSqDGfLRvF~fdt~e-------Llg~mkSYFGGL---LCvcWSPD-GKyIvtGGEDDLVt 357 (636)
T KOG2394|consen 290 EGSINEFAFSPDG-KYLATVSQDGFLRIFDFDTQE-------LLGVMKSYFGGL---LCVCWSPD-GKYIVTGGEDDLVT 357 (636)
T ss_pred cccccceeEcCCC-ceEEEEecCceEEEeeccHHH-------HHHHHHhhccce---EEEEEcCC-ccEEEecCCcceEE
Confidence 4589999999999 999999999999999998753 334445455556 49999999 99999999999999
Q ss_pred EEECCCCCCCCccccceeeeecccccEeEEEEeeec
Q psy4579 208 LWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLI 243 (368)
Q Consensus 208 iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~ 243 (368)
||.+... +.+..-++|...|..|+|.|..
T Consensus 358 VwSf~er-------RVVARGqGHkSWVs~VaFDpyt 386 (636)
T KOG2394|consen 358 VWSFEER-------RVVARGQGHKSWVSVVAFDPYT 386 (636)
T ss_pred EEEeccc-------eEEEeccccccceeeEeecccc
Confidence 9999876 5577788999999999999843
|
|
| >KOG1273|consensus | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.8e-12 Score=106.65 Aligned_cols=262 Identities=12% Similarity=0.159 Sum_probs=169.3
Q ss_pred ceeeEecCCcccccCCCCccccccCcceeeeccccCCCCCcEEEEEEecCCCccccccCCcccCCCCcccCCCCCeeeee
Q psy4579 43 SLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQFDA 122 (368)
Q Consensus 43 ~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~ 122 (368)
..|++|++-|.+||+|..+|.+.||++.+..-..... ..-..|.++.|+.++.++..+. .|..|.+||+-.....
T Consensus 26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~iar~ls-aH~~pi~sl~WS~dgr~LltsS----~D~si~lwDl~~gs~l 100 (405)
T KOG1273|consen 26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFRIARMLS-AHVRPITSLCWSRDGRKLLTSS----RDWSIKLWDLLKGSPL 100 (405)
T ss_pred cceEEeccCcceeeeeccCCcEEEEEccccchhhhhh-ccccceeEEEecCCCCEeeeec----CCceeEEEeccCCCce
Confidence 7799999999999999999999887776553222211 1234699999988777666543 6899999998765566
Q ss_pred ccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeee----ccccceecceeeEEeCCCCCeEE
Q psy4579 123 SNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFT----GHTAVVEVRYGLSWNPSLNGYLL 198 (368)
Q Consensus 123 ~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~----~h~~~v~~~~~i~~~p~~~~~l~ 198 (368)
..+....+|+.+.|+|...+..+..-.+..-.+-++..+.. ..+. +..+.+. .+..|.+. +++++
T Consensus 101 ~rirf~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h--------~~Lp~d~d~dln~sa--s~~~fdr~-g~yIi 169 (405)
T KOG1273|consen 101 KRIRFDSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKH--------SVLPKDDDGDLNSSA--SHGVFDRR-GKYII 169 (405)
T ss_pred eEEEccCccceeeeccccCCeEEEEEecCCcEEEEecCCce--------eeccCCCcccccccc--ccccccCC-CCEEE
Confidence 66778899999999998755555555565555666654321 1111 1111111 14457777 99999
Q ss_pred EeeCCCcEEEEECCCCCCCCccccceeeeeccc-ccEeEEEEee--ecccccCCCCccceEEEE----------------
Q psy4579 199 SASDDHTICLWDINATPKENRVIDAKTIFTGHT-AVVEDYSIHR--LILGTHTSDEQNHLLIAS---------------- 259 (368)
Q Consensus 199 s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~-~~v~~v~~~~--~~~~~~~~d~~~~~~~~~---------------- 259 (368)
+|..-|.+.++|..+. +++..++-.. ..|..+.+.. ..+...+.|..++.+..+
T Consensus 170 tGtsKGkllv~~a~t~-------e~vas~rits~~~IK~I~~s~~g~~liiNtsDRvIR~ye~~di~~~~r~~e~e~~~K 242 (405)
T KOG1273|consen 170 TGTSKGKLLVYDAETL-------ECVASFRITSVQAIKQIIVSRKGRFLIINTSDRVIRTYEISDIDDEGRDGEVEPEHK 242 (405)
T ss_pred EecCcceEEEEecchh-------eeeeeeeechheeeeEEEEeccCcEEEEecCCceEEEEehhhhcccCccCCcChhHH
Confidence 9999999999999886 4555555443 5566666652 344444555555544222
Q ss_pred ------------eecCCcccccccccccCCCCCcccccCCCCceeeeeecCcc-cceeEEEEeCCCCcEEEEecCCCeEE
Q psy4579 260 ------------VQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHE-GEVNRARYMPQNPCVIATKTPSSDVL 326 (368)
Q Consensus 260 ------------~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~-~~i~~~~~~p~~~~~lasgs~Dg~i~ 326 (368)
..+++ +..+.+..- .+...+++|....|.++..+. |.. .....+.|+|-.+ ++++- ..|+|+
T Consensus 243 ~qDvVNk~~Wk~ccfs~-dgeYv~a~s-~~aHaLYIWE~~~GsLVKILh-G~kgE~l~DV~whp~rp-~i~si-~sg~v~ 317 (405)
T KOG1273|consen 243 LQDVVNKLQWKKCCFSG-DGEYVCAGS-ARAHALYIWEKSIGSLVKILH-GTKGEELLDVNWHPVRP-IIASI-ASGVVY 317 (405)
T ss_pred HHHHHhhhhhhheeecC-CccEEEecc-ccceeEEEEecCCcceeeeec-CCchhheeeccccccee-eeeec-cCCceE
Confidence 11111 111111111 233345667777777655554 555 4678899999985 56565 789999
Q ss_pred EEECCC
Q psy4579 327 VFDYTK 332 (368)
Q Consensus 327 iwd~~~ 332 (368)
+|....
T Consensus 318 iw~~~~ 323 (405)
T KOG1273|consen 318 IWAVVQ 323 (405)
T ss_pred EEEeec
Confidence 999765
|
|
| >KOG1240|consensus | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.4e-12 Score=124.50 Aligned_cols=217 Identities=16% Similarity=0.137 Sum_probs=137.5
Q ss_pred CCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCC
Q psy4579 114 PNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSL 193 (368)
Q Consensus 114 ~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~ 193 (368)
|+..|..+..+..|...|..++.++....+++|||.||+|++|+..+............++..-...+. ++...+.
T Consensus 1034 W~p~G~lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~---~vt~~~~- 1109 (1431)
T KOG1240|consen 1034 WNPRGILVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVE---KVTMCGN- 1109 (1431)
T ss_pred CCccceEeehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceE---EEEeccC-
Confidence 888899999999999999999998776589999999999999999865443222334445554455664 8888887
Q ss_pred CCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeeecccccCCCCccceEEEEeecCCccccccccc
Q psy4579 194 NGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASN 273 (368)
Q Consensus 194 ~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 273 (368)
++.+|.++.||.|.+.++.............+....+...+ .+..+.... .+.. .+.+
T Consensus 1110 ~~~~Av~t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~-vv~m~a~~~----~~~S-~~lv---------------- 1167 (1431)
T KOG1240|consen 1110 GDQFAVSTKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGV-VVSMHAFTA----IVQS-HVLV---------------- 1167 (1431)
T ss_pred CCeEEEEcCCCeEEEEEccccccccceeeeeecccccCCCc-eEEeecccc----cccc-eeEE----------------
Confidence 88999999999999999977422111111111111111111 111111000 0011 1111
Q ss_pred ccCCCCCcccccCCCCceeeeeec-CcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceee-ec
Q psy4579 274 YDTDKGDFGGFGSVSGKIEIEIKI-NHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRL-RG 351 (368)
Q Consensus 274 ~d~~~~~~~~~~~~~~~~~~~~~~-~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~-~g 351 (368)
|-...+.+..||.++.......+. ...+.|++++.+|.+ +.+++|+.-|.+.+||+|. ..++..+ .+
T Consensus 1168 y~T~~~~iv~~D~r~~~~~w~lk~~~~hG~vTSi~idp~~-~WlviGts~G~l~lWDLRF----------~~~i~sw~~P 1236 (1431)
T KOG1240|consen 1168 YATDLSRIVSWDTRMRHDAWRLKNQLRHGLVTSIVIDPWC-NWLVIGTSRGQLVLWDLRF----------RVPILSWEHP 1236 (1431)
T ss_pred EEEeccceEEecchhhhhHHhhhcCccccceeEEEecCCc-eEEEEecCCceEEEEEeec----------CceeecccCc
Confidence 111223345555554443332221 356889999999999 6888999999999999996 3344343 25
Q ss_pred ccCceeeecceeeeec
Q psy4579 352 HQKEGLIEGTYNCYLQ 367 (368)
Q Consensus 352 h~~~V~~l~w~p~~~~ 367 (368)
|..++..+.-+|-|.|
T Consensus 1237 ~~~~i~~v~~~~~~~~ 1252 (1431)
T KOG1240|consen 1237 ARAPIRHVWLCPTYPQ 1252 (1431)
T ss_pred ccCCcceEEeeccCCC
Confidence 5667777777776653
|
|
| >KOG1517|consensus | Back alignment and domain information |
|---|
Probab=99.45 E-value=3.2e-12 Score=120.50 Aligned_cols=276 Identities=15% Similarity=0.204 Sum_probs=166.8
Q ss_pred CceeeEecCCcccccCCCCccccccCcceeeeccccCC--CCCcEEEEEEecCCCccccccCCcccCCCCcccCCCCC--
Q psy4579 42 PSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSD--EQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNED-- 117 (368)
Q Consensus 42 ~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~-- 117 (368)
|..++.|+|-...++++.+.-.+.+|+|.-..-..... ......|+.+.+-++... +.....+.||.|+||..-
T Consensus 1066 ~pk~~~~hpf~p~i~~ad~r~~i~vwd~e~~~~l~~F~n~~~~~t~Vs~l~liNe~D~--aLlLtas~dGvIRIwk~y~~ 1143 (1387)
T KOG1517|consen 1066 PPKTLKFHPFEPQIAAADDRERIRVWDWEKGRLLNGFDNGAFPDTRVSDLELINEQDD--ALLLTASSDGVIRIWKDYAD 1143 (1387)
T ss_pred CCceeeecCCCceeEEcCCcceEEEEecccCceeccccCCCCCCCccceeeeecccch--hheeeeccCceEEEeccccc
Confidence 67779999999999988777777777775442222111 223455777776443221 112223569999999742
Q ss_pred ----eeeeecccc-------CCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceeccee
Q psy4579 118 ----AQFDASNYD-------TDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYG 186 (368)
Q Consensus 118 ----~~~~~~~~~-------h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 186 (368)
.+.+....+ -.+.-.-++|.... .+|++++.-..|+|||..+... ......+-..-++ +
T Consensus 1144 ~~~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~-G~Ll~tGd~r~IRIWDa~~E~~------~~diP~~s~t~vT---a 1213 (1387)
T KOG1517|consen 1144 KWKKPELVTAWSSLSDQLPGARGTGLVVDWQQQS-GHLLVTGDVRSIRIWDAHKEQV------VADIPYGSSTLVT---A 1213 (1387)
T ss_pred ccCCceeEEeeccccccCccCCCCCeeeehhhhC-CeEEecCCeeEEEEEeccccee------EeecccCCCccce---e
Confidence 122222111 11222336788776 6677777789999999987542 1112222233343 5
Q ss_pred eEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeeccccc--EeEEEEeee---cccccCCCCccceEEEEee
Q psy4579 187 LSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAV--VEDYSIHRL---ILGTHTSDEQNHLLIASVQ 261 (368)
Q Consensus 187 i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~--v~~v~~~~~---~~~~~~~d~~~~~~~~~~~ 261 (368)
+.-+...++.++.|..||.|++||.|..... ..+.....|... |..+.+.+. -+.+++.++.+++|..++.
T Consensus 1214 LS~~~~~gn~i~AGfaDGsvRvyD~R~a~~d----s~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~ 1289 (1387)
T KOG1517|consen 1214 LSADLVHGNIIAAGFADGSVRVYDRRMAPPD----SLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMS 1289 (1387)
T ss_pred ecccccCCceEEEeecCCceEEeecccCCcc----ccceeecccCCcccceeEEeecCCCcceeeeccCCeEEEEecccC
Confidence 5544444799999999999999999987542 235566677776 888888752 2556666666766655542
Q ss_pred cCCcccccccccccCCCCCcccccCCCCceeeeeecCcc--c-ceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCC
Q psy4579 262 LPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHE--G-EVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPD 338 (368)
Q Consensus 262 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~--~-~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~ 338 (368)
+. . ...+.. .|- + ..+++..|++. .++|+|+. +.|+||++.......-
T Consensus 1290 -~~-e------------------------~~~~iv-~~~~yGs~lTal~VH~ha-piiAsGs~-q~ikIy~~~G~~l~~~ 1340 (1387)
T KOG1517|consen 1290 -SK-E------------------------TFLTIV-AHWEYGSALTALTVHEHA-PIIASGSA-QLIKIYSLSGEQLNII 1340 (1387)
T ss_pred -cc-c------------------------ccceee-eccccCccceeeeeccCC-CeeeecCc-ceEEEEecChhhhccc
Confidence 00 0 001111 222 2 48999999998 59999998 9999999975332111
Q ss_pred CCCCCCCceeeec-ccCceeeecceeeeec
Q psy4579 339 PNGECHPDLRLRG-HQKEGLIEGTYNCYLQ 367 (368)
Q Consensus 339 ~~~~~~~~~~~~g-h~~~V~~l~w~p~~~~ 367 (368)
. ..-.+.+ -.+.+.+|+|||..++
T Consensus 1341 k-----~n~~F~~q~~gs~scL~FHP~~~l 1365 (1387)
T KOG1517|consen 1341 K-----YNPGFMGQRIGSVSCLAFHPHRLL 1365 (1387)
T ss_pred c-----cCcccccCcCCCcceeeecchhHh
Confidence 1 0011222 2446789999997654
|
|
| >KOG1517|consensus | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.2e-12 Score=123.21 Aligned_cols=288 Identities=16% Similarity=0.204 Sum_probs=175.4
Q ss_pred cCccchHHHHhhhhhhhhhhhhcCcchheeeccccccc-CceeeEec--CCcccccCCCCccccccCcceeee-cc--cc
Q psy4579 4 KKPFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEW-PSLTAQWL--PDVTSVQLPNEDAQFDASNYDTDK-GT--HT 77 (368)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~-~~~~~~~~--p~~~~l~~~~~~~~~~~~~~~~~~-~~--~~ 77 (368)
+.||..+.-.....+...+|+-.-..+++.+...+..- -|..+.+. .|...|.+|+.||.|+||.--... +. ..
T Consensus 1072 ~hpf~p~i~~ad~r~~i~vwd~e~~~~l~~F~n~~~~~t~Vs~l~liNe~D~aLlLtas~dGvIRIwk~y~~~~~~~eLV 1151 (1387)
T KOG1517|consen 1072 FHPFEPQIAAADDRERIRVWDWEKGRLLNGFDNGAFPDTRVSDLELINEQDDALLLTASSDGVIRIWKDYADKWKKPELV 1151 (1387)
T ss_pred ecCCCceeEEcCCcceEEEEecccCceeccccCCCCCCCccceeeeecccchhheeeeccCceEEEecccccccCCceeE
Confidence 34555555555555566666655555666666654322 26667775 456678999999999888521111 00 00
Q ss_pred CC---CCCcEE-----EEEEecCCCccccccCCcccCCCCcccCCCCCeeeeecc--ccCCCCceeeEecCCCCCeeEEE
Q psy4579 78 SD---EQNHLL-----IASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQFDASN--YDTDKGGYGLSWNPSLNGYLLSA 147 (368)
Q Consensus 78 ~~---~~~~~~-----i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~--~~h~~~v~~l~~sp~~~~~lasg 147 (368)
.. .++... -.-+.|....+.+.+++ .--.|+|||.+.+.+..- .+....|+++.-+-.+.++++.|
T Consensus 1152 Taw~~Ls~~~~~~r~~~~v~dWqQ~~G~Ll~tG----d~r~IRIWDa~~E~~~~diP~~s~t~vTaLS~~~~~gn~i~AG 1227 (1387)
T KOG1517|consen 1152 TAWSSLSDQLPGARGTGLVVDWQQQSGHLLVTG----DVRSIRIWDAHKEQVVADIPYGSSTLVTALSADLVHGNIIAAG 1227 (1387)
T ss_pred EeeccccccCccCCCCCeeeehhhhCCeEEecC----CeeEEEEEecccceeEeecccCCCccceeecccccCCceEEEe
Confidence 00 000000 01122332333333332 235688999987554433 34556788877764434899999
Q ss_pred eCCCcEEEEeCCCCCCCCcccccceeeeccccc--eecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCcccccee
Q psy4579 148 SDDHTICLWDINATPKENRVIDAKTIFTGHTAV--VEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKT 225 (368)
Q Consensus 148 ~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~--v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~ 225 (368)
..||.|++||.+..... ..+...+.|+.. | ..+.+.+.+-..|++|+.||.|++||+|...... ..
T Consensus 1228 faDGsvRvyD~R~a~~d----s~v~~~R~h~~~~~I---v~~slq~~G~~elvSgs~~G~I~~~DlR~~~~e~-----~~ 1295 (1387)
T KOG1517|consen 1228 FADGSVRVYDRRMAPPD----SLVCVYREHNDVEPI---VHLSLQRQGLGELVSGSQDGDIQLLDLRMSSKET-----FL 1295 (1387)
T ss_pred ecCCceEEeecccCCcc----ccceeecccCCcccc---eeEEeecCCCcceeeeccCCeEEEEecccCcccc-----cc
Confidence 99999999999865433 256788889877 6 4889988655579999999999999999853211 11
Q ss_pred eeeccc---ccEeEEEEee--ecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcc
Q psy4579 226 IFTGHT---AVVEDYSIHR--LILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHE 300 (368)
Q Consensus 226 ~~~~~~---~~v~~v~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~ 300 (368)
....|. ...+++..|+ .++++++. ..+.+|.... ..+.+..+... +.....
T Consensus 1296 ~iv~~~~yGs~lTal~VH~hapiiAsGs~-q~ikIy~~~G------~~l~~~k~n~~-----------------F~~q~~ 1351 (1387)
T KOG1517|consen 1296 TIVAHWEYGSALTALTVHEHAPIIASGSA-QLIKIYSLSG------EQLNIIKYNPG-----------------FMGQRI 1351 (1387)
T ss_pred eeeeccccCccceeeeeccCCCeeeecCc-ceEEEEecCh------hhhcccccCcc-----------------cccCcC
Confidence 222222 2477888875 46677665 5555554432 11111111110 111234
Q ss_pred cceeEEEEeCCCCcEEEEecCCCeEEEEECCC
Q psy4579 301 GEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 301 ~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
+.+.|++|||.. -++|.|+.|.+|.||...+
T Consensus 1352 gs~scL~FHP~~-~llAaG~~Ds~V~iYs~~k 1382 (1387)
T KOG1517|consen 1352 GSVSCLAFHPHR-LLLAAGSADSTVSIYSCEK 1382 (1387)
T ss_pred CCcceeeecchh-HhhhhccCCceEEEeecCC
Confidence 567999999998 6899999999999998764
|
|
| >KOG1310|consensus | Back alignment and domain information |
|---|
Probab=99.44 E-value=7.2e-13 Score=116.58 Aligned_cols=172 Identities=19% Similarity=0.118 Sum_probs=122.7
Q ss_pred cccCceeeEecCCcccccCCCCccccccCcceeeeccccCCCCCcEEEEEEec-CCCccccccCCcccCCCCcccCCCCC
Q psy4579 39 LEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQNHLLIASVQL-PNEDAQFDASNYDTDKGGNVQLPNED 117 (368)
Q Consensus 39 ~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~g~i~i~~~~ 117 (368)
+...|.|+.|+.||..|++||+|-.+++|++--....|...-...-.|-++.| |..+.++..++ ++|..|+++|++
T Consensus 49 H~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sg---AgDk~i~lfdl~ 125 (758)
T KOG1310|consen 49 HTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSG---AGDKLIKLFDLD 125 (758)
T ss_pred ccceecceeecCCCCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEec---cCcceEEEEecc
Confidence 45679999999999999999999999999876544444443222334666666 76666666655 679999999986
Q ss_pred e----------e-eeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceee-eccccceecce
Q psy4579 118 A----------Q-FDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIF-TGHTAVVEVRY 185 (368)
Q Consensus 118 ~----------~-~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~-~~h~~~v~~~~ 185 (368)
. . ......-|.+.|..|+-.|++|+.+-+++.||+++-+|++....-.....+...+ .-+..-+. ..
T Consensus 126 ~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~c~p~~~~~~~l~ny~~~lie-lk 204 (758)
T KOG1310|consen 126 SSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHVCNPDEDCPSILVNYNPQLIE-LK 204 (758)
T ss_pred cccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCCccCCccccccHHHHHhchhhhe-ee
Confidence 3 1 1223345899999999999999999999999999999998642111000000000 11111121 14
Q ss_pred eeEEeCCCCCeEEEeeCCCcEEEEECCCC
Q psy4579 186 GLSWNPSLNGYLLSASDDHTICLWDINAT 214 (368)
Q Consensus 186 ~i~~~p~~~~~l~s~s~dg~i~iwd~~~~ 214 (368)
++..+|....+|+.|+.|-..++||.|..
T Consensus 205 ~ltisp~rp~~laVGgsdpfarLYD~Rr~ 233 (758)
T KOG1310|consen 205 CLTISPSRPYYLAVGGSDPFARLYDRRRV 233 (758)
T ss_pred eeeecCCCCceEEecCCCchhhhhhhhhh
Confidence 89999998999999999999999997654
|
|
| >KOG0649|consensus | Back alignment and domain information |
|---|
Probab=99.43 E-value=6.9e-12 Score=99.74 Aligned_cols=228 Identities=13% Similarity=0.090 Sum_probs=134.9
Q ss_pred ceeeEecCCcccccCCCCccccccCcceeeeccccCCCCCcEEE----------EEEecCCCccccccCCcccCCCCccc
Q psy4579 43 SLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQNHLLI----------ASVQLPNEDAQFDASNYDTDKGGNVQ 112 (368)
Q Consensus 43 ~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i----------~~~~~~~~~~~~~~~~~~~~~~g~i~ 112 (368)
++.-+|+|.+++|+.|+.+|.+.+...+........ ......| ..+.+. +..+. ..+||.|+
T Consensus 13 vf~qa~sp~~~~l~agn~~G~iav~sl~sl~s~sa~-~~gk~~iv~eqahdgpiy~~~f~--d~~Ll-----s~gdG~V~ 84 (325)
T KOG0649|consen 13 VFAQAISPSKQYLFAGNLFGDIAVLSLKSLDSGSAE-PPGKLKIVPEQAHDGPIYYLAFH--DDFLL-----SGGDGLVY 84 (325)
T ss_pred HHHHhhCCcceEEEEecCCCeEEEEEehhhhccccC-CCCCcceeeccccCCCeeeeeee--hhhee-----eccCceEE
Confidence 344678999999999999999855443322221111 1122222 222221 11111 24578888
Q ss_pred CCCCC--ee-----eeecc--ccC-----CCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccc
Q psy4579 113 LPNED--AQ-----FDASN--YDT-----DKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHT 178 (368)
Q Consensus 113 i~~~~--~~-----~~~~~--~~h-----~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~ 178 (368)
-|.-. .+ ..... -.| -..|+++...|.. +-++.++.|+.+.-||+++++ ..++++||+
T Consensus 85 gw~W~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~e-nSi~~AgGD~~~y~~dlE~G~-------i~r~~rGHt 156 (325)
T KOG0649|consen 85 GWEWNEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSE-NSILFAGGDGVIYQVDLEDGR-------IQREYRGHT 156 (325)
T ss_pred EeeehhhhhhccchhhhhhcCccccCcccCCccceeEeccCC-CcEEEecCCeEEEEEEecCCE-------EEEEEcCCc
Confidence 65421 11 00011 112 2468999999987 666777789999999999986 568999999
Q ss_pred cceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecc----------cccEeEEEEeeecccccC
Q psy4579 179 AVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGH----------TAVVEDYSIHRLILGTHT 248 (368)
Q Consensus 179 ~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~----------~~~v~~v~~~~~~~~~~~ 248 (368)
+.+. ++.--.. ...++||++||++++||.++++. ...+... ...|-+++-+..
T Consensus 157 DYvH---~vv~R~~-~~qilsG~EDGtvRvWd~kt~k~-------v~~ie~yk~~~~lRp~~g~wigala~~ed------ 219 (325)
T KOG0649|consen 157 DYVH---SVVGRNA-NGQILSGAEDGTVRVWDTKTQKH-------VSMIEPYKNPNLLRPDWGKWIGALAVNED------ 219 (325)
T ss_pred ceee---eeeeccc-CcceeecCCCccEEEEeccccce-------eEEeccccChhhcCcccCceeEEEeccCc------
Confidence 9995 7665333 67799999999999999999743 2222211 122333333221
Q ss_pred CCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEE
Q psy4579 249 SDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVF 328 (368)
Q Consensus 249 ~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iw 328 (368)
|+.. .- ...+.+|.+++.+....+. -.+++.-+.|..+. ++++++...|.-|
T Consensus 220 -------WlvC-------------Gg---Gp~lslwhLrsse~t~vfp--ipa~v~~v~F~~d~---vl~~G~g~~v~~~ 271 (325)
T KOG0649|consen 220 -------WLVC-------------GG---GPKLSLWHLRSSESTCVFP--IPARVHLVDFVDDC---VLIGGEGNHVQSY 271 (325)
T ss_pred -------eEEe-------------cC---CCceeEEeccCCCceEEEe--cccceeEeeeecce---EEEeccccceeee
Confidence 1111 11 1124445555555544443 35667777776543 4467777888888
Q ss_pred ECC
Q psy4579 329 DYT 331 (368)
Q Consensus 329 d~~ 331 (368)
.+.
T Consensus 272 ~l~ 274 (325)
T KOG0649|consen 272 TLN 274 (325)
T ss_pred eec
Confidence 876
|
|
| >KOG1538|consensus | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.5e-12 Score=117.03 Aligned_cols=261 Identities=15% Similarity=0.082 Sum_probs=164.9
Q ss_pred CceeeEecCCcccccCCCCccccccCcceeeeccccCCCCC-cEEEEEEecCCCccccccCCcccCCCCcccCCCCCeee
Q psy4579 42 PSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQN-HLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQF 120 (368)
Q Consensus 42 ~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~ 120 (368)
.+..++|-|||+.|+.+-+++. ..|+...|+....... ...+.++.+..++.++. ++ +.|..|.+|+..-+-
T Consensus 14 ci~d~afkPDGsqL~lAAg~rl---liyD~ndG~llqtLKgHKDtVycVAys~dGkrFA-SG---~aDK~VI~W~~klEG 86 (1081)
T KOG1538|consen 14 CINDIAFKPDGTQLILAAGSRL---LVYDTSDGTLLQPLKGHKDTVYCVAYAKDGKRFA-SG---SADKSVIIWTSKLEG 86 (1081)
T ss_pred chheeEECCCCceEEEecCCEE---EEEeCCCcccccccccccceEEEEEEccCCceec-cC---CCceeEEEecccccc
Confidence 6778999999999998877743 5688888887777443 34588888876665554 44 468999999875322
Q ss_pred eeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEe
Q psy4579 121 DASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSA 200 (368)
Q Consensus 121 ~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~ 200 (368)
.. .+.|.+.|.|+.|+|-. ..|++++-. ..-+|..... ....|...++ +.+++|..| +++++-|
T Consensus 87 ~L-kYSH~D~IQCMsFNP~~-h~LasCsLs-dFglWS~~qK-----------~V~K~kss~R-~~~CsWtnD-GqylalG 150 (1081)
T KOG1538|consen 87 IL-KYSHNDAIQCMSFNPIT-HQLASCSLS-DFGLWSPEQK-----------SVSKHKSSSR-IICCSWTND-GQYLALG 150 (1081)
T ss_pred ee-eeccCCeeeEeecCchH-HHhhhcchh-hccccChhhh-----------hHHhhhhhee-EEEeeecCC-CcEEEEe
Confidence 22 35699999999999998 899999853 3456766542 1222333332 138999988 9999999
Q ss_pred eCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeeecccccCCCCccceEEEEeecCCcccccccccccCCCCC
Q psy4579 201 SDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGD 280 (368)
Q Consensus 201 s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 280 (368)
-.||+|.|=+-...++ ..+....|...+|.+++|+|.-- .+.+....+..|... +.. |
T Consensus 151 ~~nGTIsiRNk~gEek-----~~I~Rpgg~Nspiwsi~~~p~sg--~G~~di~aV~DW~qT-------LSF--y------ 208 (1081)
T KOG1538|consen 151 MFNGTISIRNKNGEEK-----VKIERPGGSNSPIWSICWNPSSG--EGRNDILAVADWGQT-------LSF--Y------ 208 (1081)
T ss_pred ccCceEEeecCCCCcc-----eEEeCCCCCCCCceEEEecCCCC--CCccceEEEEeccce-------eEE--E------
Confidence 9999999876443321 01222345778899999987311 111111122222110 000 0
Q ss_pred cccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeecccCceeeec
Q psy4579 281 FGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEG 360 (368)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~ 360 (368)
..+|+.+-.-+ .-.-.-.|+.+.|+|+++| .|+.|+.+.+|.... ..+-++......|+.++
T Consensus 209 -----~LsG~~Igk~r-~L~FdP~CisYf~NGEy~L-iGGsdk~L~~fTR~G-----------vrLGTvg~~D~WIWtV~ 270 (1081)
T KOG1538|consen 209 -----QLSGKQIGKDR-ALNFDPCCISYFTNGEYIL-LGGSDKQLSLFTRDG-----------VRLGTVGEQDSWIWTVQ 270 (1081)
T ss_pred -----Eecceeecccc-cCCCCchhheeccCCcEEE-EccCCCceEEEeecC-----------eEEeeccccceeEEEEE
Confidence 01122222111 2223457899999997655 788999999998752 33333333455677777
Q ss_pred ceeee
Q psy4579 361 TYNCY 365 (368)
Q Consensus 361 w~p~~ 365 (368)
-.||.
T Consensus 271 ~~PNs 275 (1081)
T KOG1538|consen 271 AKPNS 275 (1081)
T ss_pred EccCC
Confidence 77764
|
|
| >KOG0322|consensus | Back alignment and domain information |
|---|
Probab=99.42 E-value=3e-12 Score=102.96 Aligned_cols=167 Identities=15% Similarity=0.171 Sum_probs=107.6
Q ss_pred CCCCceeeEecCC-CC-CeeEEEeCCCcEEEEeCCCCCCCCc---ccccceeeeccccceecceeeEEeCCCCCeEEEee
Q psy4579 127 TDKGGYGLSWNPS-LN-GYLLSASDDHTICLWDINATPKENR---VIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSAS 201 (368)
Q Consensus 127 h~~~v~~l~~sp~-~~-~~lasg~~dg~v~iwd~~~~~~~~~---~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s 201 (368)
..+.+.|.++..+ +. -+++.|-.+|.|-+||+.++..... ..+.......|..+| +++.|.+. -+.=++|+
T Consensus 149 Klgsvmc~~~~~~c~s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpv---lsldyas~-~~rGisgg 224 (323)
T KOG0322|consen 149 KLGSVMCQDKDHACGSTFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPV---LSLDYASS-CDRGISGG 224 (323)
T ss_pred ccCceeeeeccccccceEEEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcc---eeeeechh-hcCCcCCC
Confidence 3466777775433 21 2567788999999999998632100 011234456788998 49999876 66667889
Q ss_pred CCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEe--eecccccCCCCccceEEEEeecCCcccccccccccCCCC
Q psy4579 202 DDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIH--RLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKG 279 (368)
Q Consensus 202 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 279 (368)
.+..+..|.+.......+ ......-....|..+... ..++++++-|..++++
T Consensus 225 a~dkl~~~Sl~~s~gslq---~~~e~~lknpGv~gvrIRpD~KIlATAGWD~RiRVy----------------------- 278 (323)
T KOG0322|consen 225 ADDKLVMYSLNHSTGSLQ---IRKEITLKNPGVSGVRIRPDGKILATAGWDHRIRVY----------------------- 278 (323)
T ss_pred ccccceeeeeccccCccc---ccceEEecCCCccceEEccCCcEEeecccCCcEEEE-----------------------
Confidence 999999999866422111 111111122334444443 2455555554444443
Q ss_pred CcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEEC
Q psy4579 280 DFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDY 330 (368)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~ 330 (368)
.-++......+. .|.+.|++++|+|+. .++|++|.|++|.+|++
T Consensus 279 -----swrtl~pLAVLk-yHsagvn~vAfspd~-~lmAaaskD~rISLWkL 322 (323)
T KOG0322|consen 279 -----SWRTLNPLAVLK-YHSAGVNAVAFSPDC-ELMAAASKDARISLWKL 322 (323)
T ss_pred -----EeccCCchhhhh-hhhcceeEEEeCCCC-chhhhccCCceEEeeec
Confidence 334455555554 799999999999998 69999999999999986
|
|
| >KOG2110|consensus | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.6e-11 Score=103.26 Aligned_cols=163 Identities=18% Similarity=0.197 Sum_probs=112.2
Q ss_pred ccccccCceeeEecCCcccccCCCCccccccCcceeee--ccccCC--CCCcEEEEEEecCCCccccccCCcccCCCCcc
Q psy4579 36 THALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDK--GTHTSD--EQNHLLIASVQLPNEDAQFDASNYDTDKGGNV 111 (368)
Q Consensus 36 ~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i 111 (368)
....+-++++|.+.. ++|++.-++. + +.|++.. -.|+.+ ..+..-+..+.+.+.+ ...+-. ++...|.|
T Consensus 83 e~~fpt~IL~VrmNr--~RLvV~Lee~-I--yIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n-~ylAyp-~s~t~GdV 155 (391)
T KOG2110|consen 83 EIFFPTSILAVRMNR--KRLVVCLEES-I--YIYDIKDMKLLHTIETTPPNPKGLCALSPNNAN-CYLAYP-GSTTSGDV 155 (391)
T ss_pred EEecCCceEEEEEcc--ceEEEEEccc-E--EEEecccceeehhhhccCCCccceEeeccCCCC-ceEEec-CCCCCceE
Confidence 345667899999954 5566665654 4 4555553 334433 2343334444433322 222211 22347899
Q ss_pred cCCCCCe-eeeeccccCCCCceeeEecCCCCCeeEEEeCCCc-EEEEeCCCCCCCCcccccceeeeccccceecceeeEE
Q psy4579 112 QLPNEDA-QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHT-ICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSW 189 (368)
Q Consensus 112 ~i~~~~~-~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~-v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~ 189 (368)
.+||... +.+..+..|++.+-|++|+|+| .+|||+|..|+ |||+.+.++. ....|+.-...++ +++|+|
T Consensus 156 ~l~d~~nl~~v~~I~aH~~~lAalafs~~G-~llATASeKGTVIRVf~v~~G~-------kl~eFRRG~~~~~-IySL~F 226 (391)
T KOG2110|consen 156 VLFDTINLQPVNTINAHKGPLAALAFSPDG-TLLATASEKGTVIRVFSVPEGQ-------KLYEFRRGTYPVS-IYSLSF 226 (391)
T ss_pred EEEEcccceeeeEEEecCCceeEEEECCCC-CEEEEeccCceEEEEEEcCCcc-------EeeeeeCCceeeE-EEEEEE
Confidence 9999865 3444455799999999999999 99999999998 5999998875 3456665554553 579999
Q ss_pred eCCCCCeEEEeeCCCcEEEEECCCCC
Q psy4579 190 NPSLNGYLLSASDDHTICLWDINATP 215 (368)
Q Consensus 190 ~p~~~~~l~s~s~dg~i~iwd~~~~~ 215 (368)
+|+ +++|++.|..++|+++.+....
T Consensus 227 s~d-s~~L~~sS~TeTVHiFKL~~~~ 251 (391)
T KOG2110|consen 227 SPD-SQFLAASSNTETVHIFKLEKVS 251 (391)
T ss_pred CCC-CCeEEEecCCCeEEEEEecccc
Confidence 999 9999999999999999997753
|
|
| >KOG2394|consensus | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.4e-12 Score=114.39 Aligned_cols=147 Identities=16% Similarity=0.239 Sum_probs=108.2
Q ss_pred CCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCC---------------------cccccceeeeccccceecce
Q psy4579 127 TDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKEN---------------------RVIDAKTIFTGHTAVVEVRY 185 (368)
Q Consensus 127 h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~---------------------~~~~~~~~~~~h~~~v~~~~ 185 (368)
-+..|+|++|-|.++..++.+-.+|.+.+||.+...... ....++..+.--++.+.
T Consensus 218 ~ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t~p~~~~~k~~~~f~i~t~ksk~~rNPv~~w~~~~g~in--- 294 (636)
T KOG2394|consen 218 NKSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGATAPSYQALKDGDQFAILTSKSKKTRNPVARWHIGEGSIN--- 294 (636)
T ss_pred cccceEEEEEEeCCCceEEEEEecCceEEeeccccccCCCCcccccCCCCeeEEeeeeccccCCccceeEecccccc---
Confidence 347899999999987888888999999999864321000 00112222222334553
Q ss_pred eeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeeecccccCCCCccceEEEEeecCCc
Q psy4579 186 GLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNE 265 (368)
Q Consensus 186 ~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 265 (368)
.++|+|| +.+||+.|.||.++|+|..+.. .+..+
T Consensus 295 ~f~FS~D-G~~LA~VSqDGfLRvF~fdt~e-------Llg~m-------------------------------------- 328 (636)
T KOG2394|consen 295 EFAFSPD-GKYLATVSQDGFLRIFDFDTQE-------LLGVM-------------------------------------- 328 (636)
T ss_pred ceeEcCC-CceEEEEecCceEEEeeccHHH-------HHHHH--------------------------------------
Confidence 8999997 9999999999999999987641 00000
Q ss_pred ccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCC
Q psy4579 266 DAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHP 345 (368)
Q Consensus 266 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~ 345 (368)
+ .--+...|++|+||| .+|++|++|..|.||.+.. .+.
T Consensus 329 ------------------------------k-SYFGGLLCvcWSPDG-KyIvtGGEDDLVtVwSf~e----------rRV 366 (636)
T KOG2394|consen 329 ------------------------------K-SYFGGLLCVCWSPDG-KYIVTGGEDDLVTVWSFEE----------RRV 366 (636)
T ss_pred ------------------------------H-hhccceEEEEEcCCc-cEEEecCCcceEEEEEecc----------ceE
Confidence 0 123568999999999 6888999999999999964 555
Q ss_pred ceeeecccCceeeecceeee
Q psy4579 346 DLRLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 346 ~~~~~gh~~~V~~l~w~p~~ 365 (368)
+.+=+||++.|..++|.| |
T Consensus 367 VARGqGHkSWVs~VaFDp-y 385 (636)
T KOG2394|consen 367 VARGQGHKSWVSVVAFDP-Y 385 (636)
T ss_pred EEeccccccceeeEeecc-c
Confidence 566689999999999998 5
|
|
| >KOG4227|consensus | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.6e-12 Score=109.95 Aligned_cols=195 Identities=15% Similarity=0.159 Sum_probs=128.0
Q ss_pred ccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeec-cccceecceeeEEeCCCCCeEEEee
Q psy4579 123 SNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTG-HTAVVEVRYGLSWNPSLNGYLLSAS 201 (368)
Q Consensus 123 ~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~i~~~p~~~~~l~s~s 201 (368)
-+.+|.+.|++|.|+.++ ++||+|+.|..+++|++...- ..+.-+++..... |...| +|++|... +.++.+|+
T Consensus 51 D~~~H~GCiNAlqFS~N~-~~L~SGGDD~~~~~W~~de~~-~~k~~KPI~~~~~~H~SNI---F~L~F~~~-N~~~~SG~ 124 (609)
T KOG4227|consen 51 DVREHTGCINALQFSHND-RFLASGGDDMHGRVWNVDELM-VRKTPKPIGVMEHPHRSNI---FSLEFDLE-NRFLYSGE 124 (609)
T ss_pred hhhhhccccceeeeccCC-eEEeecCCcceeeeechHHHH-hhcCCCCceeccCccccce---EEEEEccC-CeeEecCC
Confidence 457799999999999998 999999999999999987531 1111234444433 33556 69999987 89999999
Q ss_pred CCCcEEEEECCCCCCCCccccceeeeeccc---ccEeEEEEee--ecccccCCCCccceEEEEeecCCcccccccccccC
Q psy4579 202 DDHTICLWDINATPKENRVIDAKTIFTGHT---AVVEDYSIHR--LILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDT 276 (368)
Q Consensus 202 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~---~~v~~v~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~ 276 (368)
.+++|.+-|+++.+ .+..+. |. ..|+.+..+| .++++.+.++.+.+
T Consensus 125 ~~~~VI~HDiEt~q-------si~V~~-~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~--------------------- 175 (609)
T KOG4227|consen 125 RWGTVIKHDIETKQ-------SIYVAN-ENNNRGDVYHMDQHPTDNTLIVVTRAKLVSF--------------------- 175 (609)
T ss_pred CcceeEeeecccce-------eeeeec-ccCcccceeecccCCCCceEEEEecCceEEE---------------------
Confidence 99999999999873 233332 33 3677777776 23333333332222
Q ss_pred CCCCcccccCCCCc-ee-eeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeee---c
Q psy4579 277 DKGDFGGFGSVSGK-IE-IEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLR---G 351 (368)
Q Consensus 277 ~~~~~~~~~~~~~~-~~-~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~---g 351 (368)
||.+... .. ..+...-......+.|+|..+.||++.+..+-+.+||+++.. .++.+.. +
T Consensus 176 -------~D~Rd~~~~~~~~~~AN~~~~F~t~~F~P~~P~Li~~~~~~~G~~~~D~R~~~---------~~~~~~~~~~~ 239 (609)
T KOG4227|consen 176 -------IDNRDRQNPISLVLPANSGKNFYTAEFHPETPALILVNSETGGPNVFDRRMQA---------RPVYQRSMFKG 239 (609)
T ss_pred -------EeccCCCCCCceeeecCCCccceeeeecCCCceeEEeccccCCCCceeecccc---------chHHhhhcccc
Confidence 2222221 11 111112234567899999999999999999999999999743 2222222 1
Q ss_pred cc---CceeeecceeeeecC
Q psy4579 352 HQ---KEGLIEGTYNCYLQR 368 (368)
Q Consensus 352 h~---~~V~~l~w~p~~~~~ 368 (368)
-. ..-.++.|+|+..|.
T Consensus 240 L~~~~~~~M~~~~~~~G~Q~ 259 (609)
T KOG4227|consen 240 LPQENTEWMGSLWSPSGNQF 259 (609)
T ss_pred CcccchhhhheeeCCCCCee
Confidence 11 123578888887763
|
|
| >KOG0649|consensus | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.4e-11 Score=98.04 Aligned_cols=171 Identities=16% Similarity=0.224 Sum_probs=112.2
Q ss_pred CCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCC---CcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCc
Q psy4579 129 KGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKE---NRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHT 205 (368)
Q Consensus 129 ~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~---~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~ 205 (368)
..|.+-+|+|.+ ++|+.|+.+|.|.+..++..... .+-..++..+++|.+++ +.++|+ ..+|++|+ ||.
T Consensus 11 ~tvf~qa~sp~~-~~l~agn~~G~iav~sl~sl~s~sa~~~gk~~iv~eqahdgpi---y~~~f~---d~~Lls~g-dG~ 82 (325)
T KOG0649|consen 11 NTVFAQAISPSK-QYLFAGNLFGDIAVLSLKSLDSGSAEPPGKLKIVPEQAHDGPI---YYLAFH---DDFLLSGG-DGL 82 (325)
T ss_pred HHHHHHhhCCcc-eEEEEecCCCeEEEEEehhhhccccCCCCCcceeeccccCCCe---eeeeee---hhheeecc-Cce
Confidence 356677899998 99999999999999998754322 11122445668999999 699998 45677776 499
Q ss_pred EEEEECCCCCCC---Cccccceeeee---cccccEeEEEEeeecccccCCCCccceEEEEeecCCcccccccccccCCCC
Q psy4579 206 ICLWDINATPKE---NRVIDAKTIFT---GHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKG 279 (368)
Q Consensus 206 i~iwd~~~~~~~---~~~~~~~~~~~---~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 279 (368)
|+-|..+...+. +++++...... ..-..|+++...|. .+.++. . ..++
T Consensus 83 V~gw~W~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~---------enSi~~--------------A---gGD~ 136 (325)
T KOG0649|consen 83 VYGWEWNEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPS---------ENSILF--------------A---GGDG 136 (325)
T ss_pred EEEeeehhhhhhccchhhhhhcCccccCcccCCccceeEeccC---------CCcEEE--------------e---cCCe
Confidence 999987654321 22222111111 11233555554431 011111 1 1223
Q ss_pred CcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCC
Q psy4579 280 DFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPS 335 (368)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~ 335 (368)
.+..+|+.+|++...++ +|++-|-++.--.....+| ||++||++|+||.++.+.
T Consensus 137 ~~y~~dlE~G~i~r~~r-GHtDYvH~vv~R~~~~qil-sG~EDGtvRvWd~kt~k~ 190 (325)
T KOG0649|consen 137 VIYQVDLEDGRIQREYR-GHTDYVHSVVGRNANGQIL-SGAEDGTVRVWDTKTQKH 190 (325)
T ss_pred EEEEEEecCCEEEEEEc-CCcceeeeeeecccCccee-ecCCCccEEEEeccccce
Confidence 35567777888888887 9999999998844443566 999999999999987554
|
|
| >KOG0309|consensus | Back alignment and domain information |
|---|
Probab=99.36 E-value=5.2e-12 Score=114.91 Aligned_cols=282 Identities=13% Similarity=0.108 Sum_probs=180.3
Q ss_pred cccccccCceeeEecCCcccccCCCCccccccCcceeeeccccCCCCCcEEEEEEecCCCccccccCCcccCCCCcccCC
Q psy4579 35 MTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLP 114 (368)
Q Consensus 35 ~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~ 114 (368)
.+-.+..++..+.-.|-|+.+++++..|-+.+-.-+..+...-.-.-...-++.++|.++........- .....-.+|
T Consensus 19 lsl~v~~~~~a~si~p~grdi~lAsr~gl~i~dld~p~~ppr~l~h~tpw~vad~qws~h~a~~~wiVs--ts~qkaiiw 96 (1081)
T KOG0309|consen 19 LSLKVDGGFNAVSINPSGRDIVLASRQGLYIIDLDDPFTPPRWLHHITPWQVADVQWSPHPAKPYWIVS--TSNQKAIIW 96 (1081)
T ss_pred eEEEecCcccceeeccccchhhhhhhcCeEEEeccCCCCCceeeeccCcchhcceecccCCCCceeEEe--cCcchhhhh
Confidence 344466788888999999999999888865322111111000000112233666777554433221110 124455678
Q ss_pred CCC----eeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEe
Q psy4579 115 NED----AQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWN 190 (368)
Q Consensus 115 ~~~----~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~ 190 (368)
++- ..+..-+.+|.++|+.+-|+|+.+..+|+++.|-.+..||+++... ++..+..-....+ .++|+
T Consensus 97 nlA~ss~~aIef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~------p~ys~~~w~s~as---qVkwn 167 (1081)
T KOG0309|consen 97 NLAKSSSNAIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHR------PFYSTSSWRSAAS---QVKWN 167 (1081)
T ss_pred hhhcCCccceEEEEecCccceeccccCCCCCcceeeccccccceeeeccCCCc------ceeeeecccccCc---eeeec
Confidence 763 3456667889999999999999999999999999999999998653 3444443333333 89999
Q ss_pred CCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeee---cccccCCCCccceEEEEeecCCccc
Q psy4579 191 PSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRL---ILGTHTSDEQNHLLIASVQLPNEDA 267 (368)
Q Consensus 191 p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~---~~~~~~~d~~~~~~~~~~~~~~~~~ 267 (368)
..+++ +...+....|++||++.+. .++..+++|...|+.++|+.. .+.+.+.|+++..|..+
T Consensus 168 yk~p~-vlasshg~~i~vwd~r~gs------~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~-------- 232 (1081)
T KOG0309|consen 168 YKDPN-VLASSHGNDIFVWDLRKGS------TPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYS-------- 232 (1081)
T ss_pred ccCcc-hhhhccCCceEEEeccCCC------cceEEecccceeeehHHHhhhhhhhhcccCCCCceeeeccc--------
Confidence 87444 4555788899999999885 567889999999999999852 34455555555554332
Q ss_pred ccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecC-CCeEEEEECCCCCCCCCCCCCCCCc
Q psy4579 268 QFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTP-SSDVLVFDYTKHPSKPDPNGECHPD 346 (368)
Q Consensus 268 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~-Dg~i~iwd~~~~~~~~~~~~~~~~~ 346 (368)
..............+|..-.+.|-|+.++.--.. +..+.+.+-+...+.........++
T Consensus 233 --------------------kSt~e~~~~vtt~~piw~~r~~Pfg~g~~~mp~~G~n~v~~~~c~n~d~e~n~~~~~~pV 292 (1081)
T KOG0309|consen 233 --------------------KSTTESKRTVTTNFPIWRGRYLPFGEGYCIMPMVGGNMVPQLRCENSDLEWNVFDLNTPV 292 (1081)
T ss_pred --------------------ccccccceeccccCcceeccccccCceeEeccccCCeeeeeccccchhhhhccccCCcce
Confidence 1111222222456788888888977554433222 2345555555443333334456788
Q ss_pred eeeecccCceeeecce
Q psy4579 347 LRLRGHQKEGLIEGTY 362 (368)
Q Consensus 347 ~~~~gh~~~V~~l~w~ 362 (368)
.++.||.+.|....|-
T Consensus 293 h~F~GH~D~V~eFlWR 308 (1081)
T KOG0309|consen 293 HTFVGHDDVVLEFLWR 308 (1081)
T ss_pred eeecCcchHHHHHhhh
Confidence 9999999999877763
|
|
| >PRK11028 6-phosphogluconolactonase; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=3.6e-11 Score=107.10 Aligned_cols=161 Identities=10% Similarity=0.133 Sum_probs=90.8
Q ss_pred ceeeEecCCcccccCCC-CccccccCcceeeeccc--cCCCCCcEEEEEEecCCCccccccCCcccCCCCcccCCCCCe-
Q psy4579 43 SLTAQWLPDVTSVQLPN-EDAQFDASNYDTDKGTH--TSDEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDA- 118 (368)
Q Consensus 43 ~~~~~~~p~~~~l~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~- 118 (368)
...+.++|++++|.+++ .++.+.++..+ ..|.. ............+.+.+.+..+.++.+. ++.|.+|+.+.
T Consensus 37 ~~~l~~spd~~~lyv~~~~~~~i~~~~~~-~~g~l~~~~~~~~~~~p~~i~~~~~g~~l~v~~~~---~~~v~v~~~~~~ 112 (330)
T PRK11028 37 VQPMVISPDKRHLYVGVRPEFRVLSYRIA-DDGALTFAAESPLPGSPTHISTDHQGRFLFSASYN---ANCVSVSPLDKD 112 (330)
T ss_pred CccEEECCCCCEEEEEECCCCcEEEEEEC-CCCceEEeeeecCCCCceEEEECCCCCEEEEEEcC---CCeEEEEEECCC
Confidence 44589999999886653 45555434332 12221 1110000012345555455445544433 68888887652
Q ss_pred -ee--eeccccCCCCceeeEecCCCCCee-EEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCC
Q psy4579 119 -QF--DASNYDTDKGGYGLSWNPSLNGYL-LSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLN 194 (368)
Q Consensus 119 -~~--~~~~~~h~~~v~~l~~sp~~~~~l-asg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~ 194 (368)
.. ......+.....+++++|++ +++ ++...++.|.+||+++..................++ + .+.|+|+ +
T Consensus 113 g~~~~~~~~~~~~~~~~~~~~~p~g-~~l~v~~~~~~~v~v~d~~~~g~l~~~~~~~~~~~~g~~p-~---~~~~~pd-g 186 (330)
T PRK11028 113 GIPVAPIQIIEGLEGCHSANIDPDN-RTLWVPCLKEDRIRLFTLSDDGHLVAQEPAEVTTVEGAGP-R---HMVFHPN-Q 186 (330)
T ss_pred CCCCCceeeccCCCcccEeEeCCCC-CEEEEeeCCCCEEEEEEECCCCcccccCCCceecCCCCCC-c---eEEECCC-C
Confidence 11 11122334456788999998 555 556677999999997632110000000111112222 2 8999998 8
Q ss_pred CeEEEeeC-CCcEEEEECCC
Q psy4579 195 GYLLSASD-DHTICLWDINA 213 (368)
Q Consensus 195 ~~l~s~s~-dg~i~iwd~~~ 213 (368)
.+++++.. +++|.+||+..
T Consensus 187 ~~lyv~~~~~~~v~v~~~~~ 206 (330)
T PRK11028 187 QYAYCVNELNSSVDVWQLKD 206 (330)
T ss_pred CEEEEEecCCCEEEEEEEeC
Confidence 88877765 99999999974
|
|
| >PF12265 CAF1C_H4-bd: Histone-binding protein RBBP4 or subunit C of CAF1 complex; InterPro: IPR022052 The CAF-1 complex is a conserved heterotrimeric protein complex that promotes histone H3 and H4 deposition onto newly synthesized DNA during replication or DNA repair; specifically it facilitates replication-dependent nucleosome assembly with the major histone H3 (H3 | Back alignment and domain information |
|---|
Probab=99.32 E-value=5.7e-13 Score=89.01 Aligned_cols=72 Identities=50% Similarity=0.834 Sum_probs=51.4
Q ss_pred hhhhhhhhhcCcchheeecccccccCceeeEecCCcccccCCCCccccccCcceeeeccccCC-CCCcEEEEEEecCC
Q psy4579 17 NEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSD-EQNHLLIASVQLPN 93 (368)
Q Consensus 17 ~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~ 93 (368)
+++|++||+|+|.+|+.+..+.++||++|++|.||... ++++ -......+..||++.+ .++++.|..+.+|.
T Consensus 1 ~e~~~lWk~n~p~lYd~~~~~~l~WPsLS~dwlpd~~~----~~~~-~~~~~~~ll~GT~t~~~~~n~l~v~~~~~p~ 73 (74)
T PF12265_consen 1 NEEYELWKKNDPSLYDLLHTHSLEWPSLSFDWLPDSLE----GDNR-NYPHSQYLLLGTQTSGQEQNYLYVMKVSLPS 73 (74)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEE-SS--S-EEEEEEEEE------TT--SEEEEEEEEE---SS-S-EEEEEEEEEEE-
T ss_pred CcceeehhhCCHHHHHHHhhccCCCCCeEEEECcCccc----ccCC-CCccEEEEEEEECcCCCCCCEEEEEEEeCCC
Confidence 57999999999999999999999999999999999886 2222 1124567789999987 88899999998874
|
1). This domain is an alpha helix which sits just upstream of the WD40 seven-bladed beta-propeller in the human RbAp46 protein. RbAp46 folds into the beta-propeller and binds histone H4 in a groove formed between this N-terminal helix and an extended loop inserted into blade six []. ; PDB: 2YBA_A 3C99_A 2YB8_B 2XYI_A 3C9C_A 3CFV_B 3CFS_B 2XU7_A 3GFC_A. |
| >KOG2110|consensus | Back alignment and domain information |
|---|
Probab=99.30 E-value=5.7e-10 Score=94.08 Aligned_cols=237 Identities=13% Similarity=0.137 Sum_probs=151.3
Q ss_pred eeEecCCcccccCCCCccccccCcceee-eccccCCCCCcEEEEEEecCCCccccccCCcccCCCCcccCCCCCeeeeec
Q psy4579 45 TAQWLPDVTSVQLPNEDAQFDASNYDTD-KGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQFDAS 123 (368)
Q Consensus 45 ~~~~~p~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~ 123 (368)
...|..|...|..|+.+|.- .|+.. .+.+.....+...|-..-|...-..+. .. .....+++.+.+......
T Consensus 10 ~~~~Nqd~~~lsvGs~~Gyk---~~~~~~~~k~~~~~~~~~~IvEmLFSSSLvaiV-~~---~qpr~Lkv~~~Kk~~~IC 82 (391)
T KOG2110|consen 10 FIGFNQDSTLLSVGSKDGYK---IFSCSPFEKCFSKDTEGVSIVEMLFSSSLVAIV-SI---KQPRKLKVVHFKKKTTIC 82 (391)
T ss_pred eeeeccceeEEEccCCCcee---EEecCchHHhhcccCCCeEEEEeecccceeEEE-ec---CCCceEEEEEcccCceEE
Confidence 34588999999999999863 23322 122333344444454444543211111 11 122467778877666666
Q ss_pred cccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEe--e
Q psy4579 124 NYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSA--S 201 (368)
Q Consensus 124 ~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~--s 201 (368)
.......|.+++++.+ .|+++-.+ .|.|||+++.+. +..+.....+...+. +++.++. +.++|-- -
T Consensus 83 e~~fpt~IL~VrmNr~---RLvV~Lee-~IyIydI~~Mkl----LhTI~t~~~n~~gl~---AlS~n~~-n~ylAyp~s~ 150 (391)
T KOG2110|consen 83 EIFFPTSILAVRMNRK---RLVVCLEE-SIYIYDIKDMKL----LHTIETTPPNPKGLC---ALSPNNA-NCYLAYPGST 150 (391)
T ss_pred EEecCCceEEEEEccc---eEEEEEcc-cEEEEeccccee----ehhhhccCCCccceE---eeccCCC-CceEEecCCC
Confidence 6667789999999964 45555544 499999998642 111222223444442 5555555 4566543 2
Q ss_pred CCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee--ecccccCCCCccceEEEEeecCCcccccccccccCCCC
Q psy4579 202 DDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKG 279 (368)
Q Consensus 202 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 279 (368)
.-|.|.|||..+- .+...+..|...+-+++|++ .++++++..+++-
T Consensus 151 t~GdV~l~d~~nl-------~~v~~I~aH~~~lAalafs~~G~llATASeKGTVI------------------------- 198 (391)
T KOG2110|consen 151 TSGDVVLFDTINL-------QPVNTINAHKGPLAALAFSPDGTLLATASEKGTVI------------------------- 198 (391)
T ss_pred CCceEEEEEcccc-------eeeeEEEecCCceeEEEECCCCCEEEEeccCceEE-------------------------
Confidence 4689999999886 56778889999999999985 5666666543321
Q ss_pred CcccccCCCCceeeeeecCc-ccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCC
Q psy4579 280 DFGGFGSVSGKIEIEIKINH-EGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPS 335 (368)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~h-~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~ 335 (368)
+.+...+|+...+++.|- ...|.+++|+|++ .+|+..|..++|++|.+.....
T Consensus 199 --RVf~v~~G~kl~eFRRG~~~~~IySL~Fs~ds-~~L~~sS~TeTVHiFKL~~~~~ 252 (391)
T KOG2110|consen 199 --RVFSVPEGQKLYEFRRGTYPVSIYSLSFSPDS-QFLAASSNTETVHIFKLEKVSN 252 (391)
T ss_pred --EEEEcCCccEeeeeeCCceeeEEEEEEECCCC-CeEEEecCCCeEEEEEeccccc
Confidence 122233466666666543 3478999999999 4777778999999999987553
|
|
| >PRK03629 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=1.8e-10 Score=105.78 Aligned_cols=219 Identities=10% Similarity=0.088 Sum_probs=116.5
Q ss_pred EEEEecCCCccccccCCcccCCCCcccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEE-EeCCC--cEEEEeCCCCC
Q psy4579 86 IASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLS-ASDDH--TICLWDINATP 162 (368)
Q Consensus 86 i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~las-g~~dg--~v~iwd~~~~~ 162 (368)
+....|.+++..+....+. .++..+.+|+..+.....+....+.+...+|+|+| +.|+. .+.+| .|.+||+.++.
T Consensus 201 ~~~p~wSPDG~~la~~s~~-~g~~~i~i~dl~~G~~~~l~~~~~~~~~~~~SPDG-~~La~~~~~~g~~~I~~~d~~tg~ 278 (429)
T PRK03629 201 LMSPAWSPDGSKLAYVTFE-SGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDG-SKLAFALSKTGSLNLYVMDLASGQ 278 (429)
T ss_pred eeeeEEcCCCCEEEEEEec-CCCcEEEEEECCCCCeEEccCCCCCcCCeEECCCC-CEEEEEEcCCCCcEEEEEECCCCC
Confidence 4555665555444432221 23456777877654333333444556679999999 66654 45555 48888988753
Q ss_pred CCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeC-CCcEEEE--ECCCCCCCCccccceeeeecccccEeEEEE
Q psy4579 163 KENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASD-DHTICLW--DINATPKENRVIDAKTIFTGHTAVVEDYSI 239 (368)
Q Consensus 163 ~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~-dg~i~iw--d~~~~~~~~~~~~~~~~~~~~~~~v~~v~~ 239 (368)
...+..+...+. ...|+|+ +..|+..+. ++...|| |+.++. ...+...........|
T Consensus 279 --------~~~lt~~~~~~~---~~~wSPD-G~~I~f~s~~~g~~~Iy~~d~~~g~--------~~~lt~~~~~~~~~~~ 338 (429)
T PRK03629 279 --------IRQVTDGRSNNT---EPTWFPD-SQNLAYTSDQAGRPQVYKVNINGGA--------PQRITWEGSQNQDADV 338 (429)
T ss_pred --------EEEccCCCCCcC---ceEECCC-CCEEEEEeCCCCCceEEEEECCCCC--------eEEeecCCCCccCEEE
Confidence 233333333443 8999999 777766554 4555555 554432 1222222223344555
Q ss_pred eeecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEe
Q psy4579 240 HRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATK 319 (368)
Q Consensus 240 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasg 319 (368)
+| |+ ..+..... +.....+..++..++.... +... .......|+|+|. .|+.+
T Consensus 339 Sp--------DG-~~Ia~~~~--------------~~g~~~I~~~dl~~g~~~~-Lt~~--~~~~~p~~SpDG~-~i~~~ 391 (429)
T PRK03629 339 SS--------DG-KFMVMVSS--------------NGGQQHIAKQDLATGGVQV-LTDT--FLDETPSIAPNGT-MVIYS 391 (429)
T ss_pred CC--------CC-CEEEEEEc--------------cCCCceEEEEECCCCCeEE-eCCC--CCCCCceECCCCC-EEEEE
Confidence 54 11 11111110 0000112223333343221 1111 2234678999995 45555
Q ss_pred cCCCe---EEEEECCCCCCCCCCCCCCCCceeeecccCceeeecceee
Q psy4579 320 TPSSD---VLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYNC 364 (368)
Q Consensus 320 s~Dg~---i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p~ 364 (368)
+.|+. +.++++. ......+.+|.+.+...+|+|.
T Consensus 392 s~~~~~~~l~~~~~~-----------G~~~~~l~~~~~~~~~p~Wsp~ 428 (429)
T PRK03629 392 SSQGMGSVLNLVSTD-----------GRFKARLPATDGQVKFPAWSPY 428 (429)
T ss_pred EcCCCceEEEEEECC-----------CCCeEECccCCCCcCCcccCCC
Confidence 66654 6677775 2333456788999999999985
|
|
| >COG2319 FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.26 E-value=8.9e-10 Score=100.66 Aligned_cols=219 Identities=22% Similarity=0.329 Sum_probs=149.1
Q ss_pred EEEEEecCCCccccccCCcccCCCCcccCCCCCee--eeeccccCC-CCceeeEe-cCCCCCeeEEEeC-CCcEEEEeCC
Q psy4579 85 LIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQ--FDASNYDTD-KGGYGLSW-NPSLNGYLLSASD-DHTICLWDIN 159 (368)
Q Consensus 85 ~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~--~~~~~~~h~-~~v~~l~~-sp~~~~~lasg~~-dg~v~iwd~~ 159 (368)
.+..+.+......+.... .++.+.+|+.... ....+..+. ..+..+.+ ++++...++..+. |+.+++|+..
T Consensus 67 ~i~~~~~~~~~~~~~~~~----~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 142 (466)
T COG2319 67 SITSIAFSPDGELLLSGS----SDGTIKLWDLDNGEKLIKSLEGLHDSSVSKLALSSPDGNSILLASSSLDGTVKLWDLS 142 (466)
T ss_pred eEEEEEECCCCcEEEEec----CCCcEEEEEcCCCceeEEEEeccCCCceeeEEEECCCcceEEeccCCCCccEEEEEec
Confidence 355555544443333222 5889999998765 455555534 37777777 7887325555444 9999999998
Q ss_pred C-CCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeC-CCcEEEEECCCCCCCCccccceeeeecccccEeEE
Q psy4579 160 A-TPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASD-DHTICLWDINATPKENRVIDAKTIFTGHTAVVEDY 237 (368)
Q Consensus 160 ~-~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v 237 (368)
. .. ....+..|...+. .++|+|+ +..+++++. |+.+++|++... .....+.+|...|.++
T Consensus 143 ~~~~-------~~~~~~~~~~~v~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~v~~~ 204 (466)
T COG2319 143 TPGK-------LIRTLEGHSESVT---SLAFSPD-GKLLASGSSLDGTIKLWDLRTG-------KPLSTLAGHTDPVSSL 204 (466)
T ss_pred CCCe-------EEEEEecCcccEE---EEEECCC-CCEEEecCCCCCceEEEEcCCC-------ceEEeeccCCCceEEE
Confidence 7 22 4578889999995 9999998 778888885 999999999874 3466777799999999
Q ss_pred EEeee---cccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCc
Q psy4579 238 SIHRL---ILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPC 314 (368)
Q Consensus 238 ~~~~~---~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~ 314 (368)
+|.+. ++.+.+.++.+.+| +...+........+|...+ -..|+|++ .
T Consensus 205 ~~~~~~~~~~~~~~~d~~i~~w----------------------------d~~~~~~~~~~~~~~~~~~-~~~~~~~~-~ 254 (466)
T COG2319 205 AFSPDGGLLIASGSSDGTIRLW----------------------------DLSTGKLLRSTLSGHSDSV-VSSFSPDG-S 254 (466)
T ss_pred EEcCCcceEEEEecCCCcEEEE----------------------------ECCCCcEEeeecCCCCcce-eEeECCCC-C
Confidence 99852 22222333333322 2222333331233677765 34899999 6
Q ss_pred EEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeecccCceeeecceee
Q psy4579 315 VIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYNC 364 (368)
Q Consensus 315 ~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p~ 364 (368)
++++++.|+.+++|+++... . ....+.+|...|.++.|+|.
T Consensus 255 ~~~~~~~d~~~~~~~~~~~~--------~-~~~~~~~~~~~v~~~~~~~~ 295 (466)
T COG2319 255 LLASGSSDGTIRLWDLRSSS--------S-LLRTLSGHSSSVLSVAFSPD 295 (466)
T ss_pred EEEEecCCCcEEEeeecCCC--------c-EEEEEecCCccEEEEEECCC
Confidence 77799999999999998522 1 22333688999999999983
|
|
| >KOG2139|consensus | Back alignment and domain information |
|---|
Probab=99.25 E-value=5.3e-10 Score=94.07 Aligned_cols=178 Identities=15% Similarity=0.214 Sum_probs=113.1
Q ss_pred cccccC---ceeeEecCCcccccCCCCccccccCcceeeeccccCC--CCCcEEEEEEecCCCccccccCCcccCCCCcc
Q psy4579 37 HALEWP---SLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSD--EQNHLLIASVQLPNEDAQFDASNYDTDKGGNV 111 (368)
Q Consensus 37 ~~~~~~---~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i 111 (368)
....|. .+-++|+|..-.+|++..|..|++. +... +.... ......+.++.|-+......+.+ --+-|
T Consensus 92 ~vt~ws~~dlr~~aWhqH~~~fava~nddvVriy--~kss-t~pt~Lks~sQrnvtclawRPlsaselavg----Cr~gI 164 (445)
T KOG2139|consen 92 DVTLWSEIDLRGVAWHQHIIAFAVATNDDVVRIY--DKSS-TCPTKLKSVSQRNVTCLAWRPLSASELAVG----CRAGI 164 (445)
T ss_pred hhhhhhhcceeeEeechhhhhhhhhccCcEEEEe--ccCC-CCCceecchhhcceeEEEeccCCcceeeee----eccee
Confidence 334555 4457799988888999888888544 3332 22221 22334588888854443333333 23558
Q ss_pred cCCCCCeeee---------------eccccCCCCceeeEecCCCCCeeEEEeC-CCcEEEEeCCCCCCCCcccccceeee
Q psy4579 112 QLPNEDAQFD---------------ASNYDTDKGGYGLSWNPSLNGYLLSASD-DHTICLWDINATPKENRVIDAKTIFT 175 (368)
Q Consensus 112 ~i~~~~~~~~---------------~~~~~h~~~v~~l~~sp~~~~~lasg~~-dg~v~iwd~~~~~~~~~~~~~~~~~~ 175 (368)
++|..+.... ..-.+| -+|+++.|+++| ..+++++. |..|.|||..++.+. ++. .+
T Consensus 165 ciW~~s~tln~~r~~~~~s~~~~qvl~~pgh-~pVtsmqwn~dg-t~l~tAS~gsssi~iWdpdtg~~~-----pL~-~~ 236 (445)
T KOG2139|consen 165 CIWSDSRTLNANRNIRMMSTHHLQVLQDPGH-NPVTSMQWNEDG-TILVTASFGSSSIMIWDPDTGQKI-----PLI-PK 236 (445)
T ss_pred EEEEcCcccccccccccccccchhheeCCCC-ceeeEEEEcCCC-CEEeecccCcceEEEEcCCCCCcc-----ccc-cc
Confidence 8887553211 112234 689999999999 88999884 678999999988642 222 22
Q ss_pred ccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee
Q psy4579 176 GHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR 241 (368)
Q Consensus 176 ~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~ 241 (368)
+ -+.++ -+.|+|+ +++|..+.-|+..++|+..+.-. ..+-.. -...|....|+|
T Consensus 237 g-lgg~s---lLkwSPd-gd~lfaAt~davfrlw~e~q~wt------~erw~l-gsgrvqtacWsp 290 (445)
T KOG2139|consen 237 G-LGGFS---LLKWSPD-GDVLFAATCDAVFRLWQENQSWT------KERWIL-GSGRVQTACWSP 290 (445)
T ss_pred C-CCcee---eEEEcCC-CCEEEEecccceeeeehhcccce------ecceec-cCCceeeeeecC
Confidence 2 23343 7999999 89999999999999996544321 111111 223777888876
|
|
| >KOG3881|consensus | Back alignment and domain information |
|---|
Probab=99.23 E-value=3.4e-10 Score=96.04 Aligned_cols=192 Identities=14% Similarity=0.138 Sum_probs=127.3
Q ss_pred CCCCcccCCCCCe-----eeeeccccCCCCceeeEecCCCCCeeEEEeCC--CcEEEEeCCCCCCCCcccccceeeeccc
Q psy4579 106 DKGGNVQLPNEDA-----QFDASNYDTDKGGYGLSWNPSLNGYLLSASDD--HTICLWDINATPKENRVIDAKTIFTGHT 178 (368)
Q Consensus 106 ~~~g~i~i~~~~~-----~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~d--g~v~iwd~~~~~~~~~~~~~~~~~~~h~ 178 (368)
..+|.+.+|+.+. .....+. -...+..+.-++..+.++|+|+.. ..+.|||++.....-..-++....-+-.
T Consensus 122 ~~sG~l~~~~~k~~d~hss~l~~la-~g~g~~~~r~~~~~p~Iva~GGke~~n~lkiwdle~~~qiw~aKNvpnD~L~Lr 200 (412)
T KOG3881|consen 122 VSSGNLQVRHDKSGDLHSSKLIKLA-TGPGLYDVRQTDTDPYIVATGGKENINELKIWDLEQSKQIWSAKNVPNDRLGLR 200 (412)
T ss_pred ecCCcEEEEeccCCccccccceeee-cCCceeeeccCCCCCceEecCchhcccceeeeecccceeeeeccCCCCccccce
Confidence 3578899998762 2222222 235677788888887889999998 8999999987631110000001111112
Q ss_pred cceecceeeEEeCC-CCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeeecccccCCCCccceEE
Q psy4579 179 AVVEVRYGLSWNPS-LNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLI 257 (368)
Q Consensus 179 ~~v~~~~~i~~~p~-~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~ 257 (368)
-+|- +.++.|-|. ....||++..-+.+++||.+.+. +|+..+.--..++.++...| +.+.++.
T Consensus 201 VPvW-~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qR------RPV~~fd~~E~~is~~~l~p---------~gn~Iy~ 264 (412)
T KOG3881|consen 201 VPVW-ITDIRFLEGSPNYKFATITRYHQVRLYDTRHQR------RPVAQFDFLENPISSTGLTP---------SGNFIYT 264 (412)
T ss_pred eeee-eccceecCCCCCceEEEEecceeEEEecCcccC------cceeEeccccCcceeeeecC---------CCcEEEE
Confidence 2221 137888763 25679999999999999998764 45555555556666665543 1122222
Q ss_pred EEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCC
Q psy4579 258 ASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 258 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
.. ..+.+..+|.+.+........+-.+.|.++..+|.+ .++|+++-|..+||+|+.+
T Consensus 265 gn-----------------~~g~l~~FD~r~~kl~g~~~kg~tGsirsih~hp~~-~~las~GLDRyvRIhD~kt 321 (412)
T KOG3881|consen 265 GN-----------------TKGQLAKFDLRGGKLLGCGLKGITGSIRSIHCHPTH-PVLASCGLDRYVRIHDIKT 321 (412)
T ss_pred ec-----------------ccchhheecccCceeeccccCCccCCcceEEEcCCC-ceEEeeccceeEEEeeccc
Confidence 21 234566677777777766555889999999999999 5899999999999999986
|
|
| >KOG0771|consensus | Back alignment and domain information |
|---|
Probab=99.22 E-value=1.1e-10 Score=99.87 Aligned_cols=185 Identities=13% Similarity=0.137 Sum_probs=120.9
Q ss_pred CCCCcccCCC-CCeeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecc
Q psy4579 106 DKGGNVQLPN-EDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVR 184 (368)
Q Consensus 106 ~~~g~i~i~~-~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~ 184 (368)
..||++++|+ .+-..+.....|.+.|.+|.|+|+| ..|++-+.| ..+||+++++..-. ..+-........
T Consensus 163 g~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dg-k~lasig~d-~~~VW~~~~g~~~a-----~~t~~~k~~~~~-- 233 (398)
T KOG0771|consen 163 GTDGTLRVWEWPSMLTILEEIAHHAEVKDLDFSPDG-KFLASIGAD-SARVWSVNTGAALA-----RKTPFSKDEMFS-- 233 (398)
T ss_pred cccceEEEEecCcchhhhhhHhhcCccccceeCCCC-cEEEEecCC-ceEEEEeccCchhh-----hcCCcccchhhh--
Confidence 4689999999 5556677788899999999999999 999999999 99999999884211 011112222232
Q ss_pred eeeEEeCCCC---C--eEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee--ecccccCCCCccceEE
Q psy4579 185 YGLSWNPSLN---G--YLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LILGTHTSDEQNHLLI 257 (368)
Q Consensus 185 ~~i~~~p~~~---~--~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~d~~~~~~~ 257 (368)
.+.|+.+ + . +++.-..-+.|+.||+...... +.+....... -...|.+++.+. .+++.++-++.+
T Consensus 234 -~cRF~~d-~~~~~l~laa~~~~~~~v~~~~~~~w~~~-~~l~~~~~~~-~~~siSsl~VS~dGkf~AlGT~dGsV---- 305 (398)
T KOG0771|consen 234 -SCRFSVD-NAQETLRLAASQFPGGGVRLCDISLWSGS-NFLRLRKKIK-RFKSISSLAVSDDGKFLALGTMDGSV---- 305 (398)
T ss_pred -hceeccc-CCCceEEEEEecCCCCceeEEEeeeeccc-cccchhhhhh-ccCcceeEEEcCCCcEEEEeccCCcE----
Confidence 6777766 4 2 2333345567888877654332 2221112122 223567777653 233333333333
Q ss_pred EEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCC
Q psy4579 258 ASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 258 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
.+++..+-+.....+.+|...|+.+.|+|+. +.+++.|.|..++|..+..
T Consensus 306 ------------------------ai~~~~~lq~~~~vk~aH~~~VT~ltF~Pds-r~~~svSs~~~~~v~~l~v 355 (398)
T KOG0771|consen 306 ------------------------AIYDAKSLQRLQYVKEAHLGFVTGLTFSPDS-RYLASVSSDNEAAVTKLAV 355 (398)
T ss_pred ------------------------EEEEeceeeeeEeehhhheeeeeeEEEcCCc-CcccccccCCceeEEEEee
Confidence 3333334455556666999999999999998 6777899999999998875
|
|
| >PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins | Back alignment and domain information |
|---|
Probab=99.20 E-value=1.6e-10 Score=93.81 Aligned_cols=151 Identities=17% Similarity=0.332 Sum_probs=96.6
Q ss_pred eeeEecCCcccccCCCC---cc-------ccccCcceeeeccc-cCCCCCcEEEEEEecCCCccccccC-CcccCCCCcc
Q psy4579 44 LTAQWLPDVTSVQLPNE---DA-------QFDASNYDTDKGTH-TSDEQNHLLIASVQLPNEDAQFDAS-NYDTDKGGNV 111 (368)
Q Consensus 44 ~~~~~~p~~~~l~~~~~---~~-------~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~g~i 111 (368)
..+.|+|+|+.|++-.. |. ...++..+...... .........|.++.|.+.+..+... + ..++.|
T Consensus 9 ~~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~~~~i~l~~~~~I~~~~WsP~g~~favi~g---~~~~~v 85 (194)
T PF08662_consen 9 AKLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNIPVESIELKKEGPIHDVAWSPNGNEFAVIYG---SMPAKV 85 (194)
T ss_pred EEEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCCccceeeccCCCceEEEEECcCCCEEEEEEc---cCCccc
Confidence 45889999998776433 11 11112111111110 0012222348888897666554332 3 235689
Q ss_pred cCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCC---CcEEEEeCCCCCCCCcccccceeeeccccceecceeeE
Q psy4579 112 QLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDD---HTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLS 188 (368)
Q Consensus 112 ~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~d---g~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~ 188 (368)
.+|+.+.+.+..+ +...++.+.|+|+| ++|++|+.+ |.+.+||+++.+ .+... .|.. ++ .++
T Consensus 86 ~lyd~~~~~i~~~--~~~~~n~i~wsP~G-~~l~~~g~~n~~G~l~~wd~~~~~-------~i~~~-~~~~-~t---~~~ 150 (194)
T PF08662_consen 86 TLYDVKGKKIFSF--GTQPRNTISWSPDG-RFLVLAGFGNLNGDLEFWDVRKKK-------KISTF-EHSD-AT---DVE 150 (194)
T ss_pred EEEcCcccEeEee--cCCCceEEEECCCC-CEEEEEEccCCCcEEEEEECCCCE-------Eeecc-ccCc-EE---EEE
Confidence 9999986665554 35678899999999 899988754 679999998653 22332 2333 43 999
Q ss_pred EeCCCCCeEEEeeC------CCcEEEEECCC
Q psy4579 189 WNPSLNGYLLSASD------DHTICLWDINA 213 (368)
Q Consensus 189 ~~p~~~~~l~s~s~------dg~i~iwd~~~ 213 (368)
|+|+ +.+|+++.. |..++||+...
T Consensus 151 WsPd-Gr~~~ta~t~~r~~~dng~~Iw~~~G 180 (194)
T PF08662_consen 151 WSPD-GRYLATATTSPRLRVDNGFKIWSFQG 180 (194)
T ss_pred EcCC-CCEEEEEEeccceeccccEEEEEecC
Confidence 9999 999998864 78899999854
|
|
| >KOG1963|consensus | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.6e-09 Score=100.79 Aligned_cols=111 Identities=17% Similarity=0.269 Sum_probs=84.2
Q ss_pred EEEEecCCCccccccCCcccCCCCcccCCCCCe----eeeecccc-CCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCC
Q psy4579 86 IASVQLPNEDAQFDASNYDTDKGGNVQLPNEDA----QFDASNYD-TDKGGYGLSWNPSLNGYLLSASDDHTICLWDINA 160 (368)
Q Consensus 86 i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~----~~~~~~~~-h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~ 160 (368)
+.+..+.+... +.+++ +.||+|.+|..-+ ....++.. |.++|.+++|+++| .+|.+|+..|.+-+|.+.+
T Consensus 208 ~t~~~~spn~~-~~Aa~---d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G-~~LlSGG~E~VLv~Wq~~T 282 (792)
T KOG1963|consen 208 ITCVALSPNER-YLAAG---DSDGRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSDG-AYLLSGGREGVLVLWQLET 282 (792)
T ss_pred ceeEEeccccc-eEEEe---ccCCcEEEEeccccccccccceEEEecccccceeEEecCC-ceEeecccceEEEEEeecC
Confidence 56666655443 33343 3579999997544 22233333 88999999999999 9999999999999999998
Q ss_pred CCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCC
Q psy4579 161 TPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINA 213 (368)
Q Consensus 161 ~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~ 213 (368)
+++ +-+..-.++|. .+.++|+ +++.+....|..|.+-.+.+
T Consensus 283 ~~k--------qfLPRLgs~I~---~i~vS~d-s~~~sl~~~DNqI~li~~~d 323 (792)
T KOG1963|consen 283 GKK--------QFLPRLGSPIL---HIVVSPD-SDLYSLVLEDNQIHLIKASD 323 (792)
T ss_pred CCc--------ccccccCCeeE---EEEEcCC-CCeEEEEecCceEEEEeccc
Confidence 752 44556677785 9999999 88888888899999987744
|
|
| >PRK04922 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.18 E-value=9.7e-10 Score=101.37 Aligned_cols=221 Identities=12% Similarity=0.127 Sum_probs=125.0
Q ss_pred CcccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCC---CcEEEEeCCCCCCCCcccccceeeeccccceecce
Q psy4579 109 GNVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDD---HTICLWDINATPKENRVIDAKTIFTGHTAVVEVRY 185 (368)
Q Consensus 109 g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~d---g~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 185 (368)
..|.+||.++.....+..+...+.+.+|+|+| +.|+..+.+ ..|.+||+.++.. ..+....+...
T Consensus 184 ~~l~i~D~~g~~~~~lt~~~~~v~~p~wSpDg-~~la~~s~~~~~~~l~~~dl~~g~~--------~~l~~~~g~~~--- 251 (433)
T PRK04922 184 YALQVADSDGYNPQTILRSAEPILSPAWSPDG-KKLAYVSFERGRSAIYVQDLATGQR--------ELVASFRGING--- 251 (433)
T ss_pred EEEEEECCCCCCceEeecCCCccccccCCCCC-CEEEEEecCCCCcEEEEEECCCCCE--------EEeccCCCCcc---
Confidence 45888888776666666788889999999999 788877643 4699999987632 23333333342
Q ss_pred eeEEeCCCCCeE-EEeeCCC--cEEEEECCCCCCCCccccceeeeecccccEeEEEEee---ecccccCCCCccceEEEE
Q psy4579 186 GLSWNPSLNGYL-LSASDDH--TICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR---LILGTHTSDEQNHLLIAS 259 (368)
Q Consensus 186 ~i~~~p~~~~~l-~s~s~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~---~~~~~~~~d~~~~~~~~~ 259 (368)
+..|+|+ +..| ++.+.+| .|.+||+.++. ...+..+.......+|++ .++.+....+...++...
T Consensus 252 ~~~~SpD-G~~l~~~~s~~g~~~Iy~~d~~~g~--------~~~lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~d 322 (433)
T PRK04922 252 APSFSPD-GRRLALTLSRDGNPEIYVMDLGSRQ--------LTRLTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVA 322 (433)
T ss_pred CceECCC-CCEEEEEEeCCCCceEEEEECCCCC--------eEECccCCCCccceEECCCCCEEEEEECCCCCceEEEEE
Confidence 7899999 6654 5666666 58999997763 122333333344566764 222222222233343332
Q ss_pred e------------------ecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecC
Q psy4579 260 V------------------QLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTP 321 (368)
Q Consensus 260 ~------------------~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~ 321 (368)
. .+++++..+.....+.....+.+++..++... .+ .+........|+|+|..++.+...
T Consensus 323 l~~g~~~~lt~~g~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~~~-~L--t~~~~~~~p~~spdG~~i~~~s~~ 399 (433)
T PRK04922 323 ASGGSAERLTFQGNYNARASVSPDGKKIAMVHGSGGQYRIAVMDLSTGSVR-TL--TPGSLDESPSFAPNGSMVLYATRE 399 (433)
T ss_pred CCCCCeEEeecCCCCccCEEECCCCCEEEEEECCCCceeEEEEECCCCCeE-EC--CCCCCCCCceECCCCCEEEEEEec
Confidence 1 11222222211111111123455565555443 22 233344567999999655555443
Q ss_pred C--CeEEEEECCCCCCCCCCCCCCCCceeeecccCceeeecceee
Q psy4579 322 S--SDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYNC 364 (368)
Q Consensus 322 D--g~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p~ 364 (368)
. +.+.++++.. .....+..+.+.+...+|+|.
T Consensus 400 ~g~~~L~~~~~~g-----------~~~~~l~~~~g~~~~p~wsp~ 433 (433)
T PRK04922 400 GGRGVLAAVSTDG-----------RVRQRLVSADGEVREPAWSPY 433 (433)
T ss_pred CCceEEEEEECCC-----------CceEEcccCCCCCCCCccCCC
Confidence 3 3466777642 223345556677888999983
|
|
| >PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.9e-09 Score=87.64 Aligned_cols=153 Identities=14% Similarity=0.221 Sum_probs=90.7
Q ss_pred eeEecCCCCCeeEEEeC---------CCcEEEEeCCCCCCCCcccccceeeec-cccceecceeeEEeCCCCCeEEE--e
Q psy4579 133 GLSWNPSLNGYLLSASD---------DHTICLWDINATPKENRVIDAKTIFTG-HTAVVEVRYGLSWNPSLNGYLLS--A 200 (368)
Q Consensus 133 ~l~~sp~~~~~lasg~~---------dg~v~iwd~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~i~~~p~~~~~l~s--~ 200 (368)
.+.|+|+|..+++.... -|...+|.++.... +...+.- ..++|. +++|+|+ ++.|+. |
T Consensus 10 ~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~------~~~~i~l~~~~~I~---~~~WsP~-g~~favi~g 79 (194)
T PF08662_consen 10 KLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNI------PVESIELKKEGPIH---DVAWSPN-GNEFAVIYG 79 (194)
T ss_pred EEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCC------ccceeeccCCCceE---EEEECcC-CCEEEEEEc
Confidence 47889988444444431 13456666644322 2233322 345675 9999999 666543 4
Q ss_pred eCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeeecccccCCCCccceEEEEeecCCcccccccccccCCCCC
Q psy4579 201 SDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGD 280 (368)
Q Consensus 201 s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 280 (368)
..++.|.+||++. .++..+ +...++.+.|+|. +..+.+..++...|.
T Consensus 80 ~~~~~v~lyd~~~--------~~i~~~--~~~~~n~i~wsP~-----------------------G~~l~~~g~~n~~G~ 126 (194)
T PF08662_consen 80 SMPAKVTLYDVKG--------KKIFSF--GTQPRNTISWSPD-----------------------GRFLVLAGFGNLNGD 126 (194)
T ss_pred cCCcccEEEcCcc--------cEeEee--cCCCceEEEECCC-----------------------CCEEEEEEccCCCcE
Confidence 5678999999973 234444 3467788999871 111111122223344
Q ss_pred cccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEec-----CCCeEEEEECC
Q psy4579 281 FGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKT-----PSSDVLVFDYT 331 (368)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs-----~Dg~i~iwd~~ 331 (368)
+.+||..+.+.+... .| ..++.++|+|+|.+++++.+ .|..++||++.
T Consensus 127 l~~wd~~~~~~i~~~--~~-~~~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~~ 179 (194)
T PF08662_consen 127 LEFWDVRKKKKISTF--EH-SDATDVEWSPDGRYLATATTSPRLRVDNGFKIWSFQ 179 (194)
T ss_pred EEEEECCCCEEeecc--cc-CcEEEEEEcCCCCEEEEEEeccceeccccEEEEEec
Confidence 556666655555443 23 35789999999965554433 38899999986
|
|
| >KOG2111|consensus | Back alignment and domain information |
|---|
Probab=99.15 E-value=2.3e-09 Score=88.81 Aligned_cols=246 Identities=11% Similarity=0.137 Sum_probs=148.4
Q ss_pred CceeeEecCCcccccCCCCccccccCcceeeeccccCC-CCCcEEEEEEecCCCccccccCCccc-CCCCcccCCCCCee
Q psy4579 42 PSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSD-EQNHLLIASVQLPNEDAQFDASNYDT-DKGGNVQLPNEDAQ 119 (368)
Q Consensus 42 ~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~g~i~i~~~~~~ 119 (368)
+.+++.|..|-...++|-+.|. +|.+-+......... .+.-..+..+-+-.+--.+...+-.+ =...++.|||...+
T Consensus 7 ~~lsvs~NQD~ScFava~~~Gf-riyn~~P~ke~~~r~~~~~G~~~veMLfR~N~laLVGGg~~pky~pNkviIWDD~k~ 85 (346)
T KOG2111|consen 7 KTLSVSFNQDHSCFAVATDTGF-RIYNCDPFKESASRQFIDGGFKIVEMLFRSNYLALVGGGSRPKYPPNKVIIWDDLKE 85 (346)
T ss_pred ceeEEEEccCCceEEEEecCce-EEEecCchhhhhhhccccCchhhhhHhhhhceEEEecCCCCCCCCCceEEEEecccC
Confidence 3566999999999998888775 334333211111111 11112222222211111111111000 01357889997777
Q ss_pred eeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCC-eEE
Q psy4579 120 FDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNG-YLL 198 (368)
Q Consensus 120 ~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~-~l~ 198 (368)
..........+|.++.+.++ .|++. ..+.|.||......+ .++.+.-...+-. -++.+|..+. +||
T Consensus 86 ~~i~el~f~~~I~~V~l~r~---riVvv-l~~~I~VytF~~n~k------~l~~~et~~NPkG---lC~~~~~~~k~~La 152 (346)
T KOG2111|consen 86 RCIIELSFNSEIKAVKLRRD---RIVVV-LENKIYVYTFPDNPK------LLHVIETRSNPKG---LCSLCPTSNKSLLA 152 (346)
T ss_pred cEEEEEEeccceeeEEEcCC---eEEEE-ecCeEEEEEcCCChh------heeeeecccCCCc---eEeecCCCCceEEE
Confidence 77777778899999999975 34444 367999999885432 2222222221111 2233443233 333
Q ss_pred E-eeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee--ecccccCCCCccceEEEEeecCCccccccccccc
Q psy4579 199 S-ASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LILGTHTSDEQNHLLIASVQLPNEDAQFDASNYD 275 (368)
Q Consensus 199 s-~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d 275 (368)
- |-.-|.|+|-|+..... .+...+.+|...|.|++.+. .++++++..++.
T Consensus 153 fPg~k~GqvQi~dL~~~~~-----~~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTL---------------------- 205 (346)
T KOG2111|consen 153 FPGFKTGQVQIVDLASTKP-----NAPSIINAHDSDIACVALNLQGTLVATASTKGTL---------------------- 205 (346)
T ss_pred cCCCccceEEEEEhhhcCc-----CCceEEEcccCceeEEEEcCCccEEEEeccCcEE----------------------
Confidence 3 34568999999977542 13467888999999999974 455555432221
Q ss_pred CCCCCcccccCCCCceeeeeecC-cccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCC
Q psy4579 276 TDKGDFGGFGSVSGKIEIEIKIN-HEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHP 334 (368)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~-h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~ 334 (368)
+++|+..+|..+.+++.| ....|.+++|+|+. .+||.+|..|++.||.++...
T Consensus 206 -----IRIFdt~~g~~l~E~RRG~d~A~iy~iaFSp~~-s~LavsSdKgTlHiF~l~~~~ 259 (346)
T KOG2111|consen 206 -----IRIFDTEDGTLLQELRRGVDRADIYCIAFSPNS-SWLAVSSDKGTLHIFSLRDTE 259 (346)
T ss_pred -----EEEEEcCCCcEeeeeecCCchheEEEEEeCCCc-cEEEEEcCCCeEEEEEeecCC
Confidence 344555667778877765 35689999999999 688899999999999998643
|
|
| >KOG1409|consensus | Back alignment and domain information |
|---|
Probab=99.14 E-value=9.3e-11 Score=97.88 Aligned_cols=189 Identities=16% Similarity=0.306 Sum_probs=122.8
Q ss_pred hhhhhhhhhhhhcCcchheeecccccccCceeeEecCCcccccCCCCccccccCc----ceeeeccccCC-CCCcEEEEE
Q psy4579 14 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASN----YDTDKGTHTSD-EQNHLLIAS 88 (368)
Q Consensus 14 ~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~----~~~~~~~~~~~-~~~~~~i~~ 88 (368)
-..++..++|.+.-..-|.-=..+..+-|+.++.+.++.++|.+|-+.|++.-+. ++..+....+. .+. .+..
T Consensus 42 ~s~drtvrv~lkrds~q~wpsI~~~mP~~~~~~~y~~e~~~L~vg~~ngtvtefs~sedfnkm~~~r~~~~h~~--~v~~ 119 (404)
T KOG1409|consen 42 VSEDRTVRVWLKRDSGQYWPSIYHYMPSPCSAMEYVSESRRLYVGQDNGTVTEFALSEDFNKMTFLKDYLAHQA--RVSA 119 (404)
T ss_pred ccccceeeeEEeccccccCchhhhhCCCCceEeeeeccceEEEEEEecceEEEEEhhhhhhhcchhhhhhhhhc--ceee
Confidence 3478889999987666555555577888999999999999999998888763111 11101111111 111 1122
Q ss_pred EecCCCcccccc-----------------------------------CCcccCCCCcccCCC---CCeeeeeccccCCCC
Q psy4579 89 VQLPNEDAQFDA-----------------------------------SNYDTDKGGNVQLPN---EDAQFDASNYDTDKG 130 (368)
Q Consensus 89 ~~~~~~~~~~~~-----------------------------------~~~~~~~~g~i~i~~---~~~~~~~~~~~h~~~ 130 (368)
+.+......+.. -.|.....|.|-+-. ..-....++.+|.++
T Consensus 120 ~if~~~~e~V~s~~~dk~~~~hc~e~~~~lg~Y~~~~~~t~~~~d~~~~fvGd~~gqvt~lr~~~~~~~~i~~~~~h~~~ 199 (404)
T KOG1409|consen 120 IVFSLTHEWVLSTGKDKQFAWHCTESGNRLGGYNFETPASALQFDALYAFVGDHSGQITMLKLEQNGCQLITTFNGHTGE 199 (404)
T ss_pred EEecCCceeEEEeccccceEEEeeccCCcccceEeeccCCCCceeeEEEEecccccceEEEEEeecCCceEEEEcCcccc
Confidence 221111000000 011111222222211 112345567889999
Q ss_pred ceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEE
Q psy4579 131 GYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWD 210 (368)
Q Consensus 131 v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd 210 (368)
+.+++|.|.. ..|.+|..|..+.+||+-..+. ....+.+|...|+ .+++.+. -..+.+++.||.|-+||
T Consensus 200 ~~~l~Wd~~~-~~LfSg~~d~~vi~wdigg~~g------~~~el~gh~~kV~---~l~~~~~-t~~l~S~~edg~i~~w~ 268 (404)
T KOG1409|consen 200 VTCLKWDPGQ-RLLFSGASDHSVIMWDIGGRKG------TAYELQGHNDKVQ---ALSYAQH-TRQLISCGEDGGIVVWN 268 (404)
T ss_pred eEEEEEcCCC-cEEEeccccCceEEEeccCCcc------eeeeeccchhhhh---hhhhhhh-heeeeeccCCCeEEEEe
Confidence 9999999987 9999999999999999976543 4578889999996 7777776 78899999999999999
Q ss_pred CCCCC
Q psy4579 211 INATP 215 (368)
Q Consensus 211 ~~~~~ 215 (368)
++...
T Consensus 269 mn~~r 273 (404)
T KOG1409|consen 269 MNVKR 273 (404)
T ss_pred cccee
Confidence 98753
|
|
| >PRK02889 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=2.9e-09 Score=97.90 Aligned_cols=224 Identities=10% Similarity=0.098 Sum_probs=123.9
Q ss_pred CcccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCC---CcEEEEeCCCCCCCCcccccceeeeccccceecce
Q psy4579 109 GNVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDD---HTICLWDINATPKENRVIDAKTIFTGHTAVVEVRY 185 (368)
Q Consensus 109 g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~d---g~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 185 (368)
..+.++|.++.....+..+...+.+.+|+|+| +.|+..+.+ ..|.+||+.++.. ..+....+.+.
T Consensus 176 ~~L~~~D~dG~~~~~l~~~~~~v~~p~wSPDG-~~la~~s~~~~~~~I~~~dl~~g~~--------~~l~~~~g~~~--- 243 (427)
T PRK02889 176 YQLQISDADGQNAQSALSSPEPIISPAWSPDG-TKLAYVSFESKKPVVYVHDLATGRR--------RVVANFKGSNS--- 243 (427)
T ss_pred cEEEEECCCCCCceEeccCCCCcccceEcCCC-CEEEEEEccCCCcEEEEEECCCCCE--------EEeecCCCCcc---
Confidence 45777777776555566788899999999999 778776643 3599999987642 22332333343
Q ss_pred eeEEeCCCCCeEE-EeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee---ecccccCCCCccceEEEEee
Q psy4579 186 GLSWNPSLNGYLL-SASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR---LILGTHTSDEQNHLLIASVQ 261 (368)
Q Consensus 186 ~i~~~p~~~~~l~-s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~---~~~~~~~~d~~~~~~~~~~~ 261 (368)
+..|+|+ +..|+ +.+.+|...||.+...... ...+..+........|++ .++.+....+...++.....
T Consensus 244 ~~~~SPD-G~~la~~~~~~g~~~Iy~~d~~~~~------~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~ 316 (427)
T PRK02889 244 APAWSPD-GRTLAVALSRDGNSQIYTVNADGSG------LRRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPAS 316 (427)
T ss_pred ceEECCC-CCEEEEEEccCCCceEEEEECCCCC------cEECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECC
Confidence 8899999 66554 6788888777765432111 223333333345566764 22222222233444443211
Q ss_pred ------------------cCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCC
Q psy4579 262 ------------------LPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSS 323 (368)
Q Consensus 262 ------------------~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg 323 (368)
++++++.+.....+.....+..++..+++... +. .........|+|++..++.+....|
T Consensus 317 ~g~~~~lt~~g~~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~~~~-lt--~~~~~~~p~~spdg~~l~~~~~~~g 393 (427)
T PRK02889 317 GGAAQRVTFTGSYNTSPRISPDGKLLAYISRVGGAFKLYVQDLATGQVTA-LT--DTTRDESPSFAPNGRYILYATQQGG 393 (427)
T ss_pred CCceEEEecCCCCcCceEECCCCCEEEEEEccCCcEEEEEEECCCCCeEE-cc--CCCCccCceECCCCCEEEEEEecCC
Confidence 11111111111111111134455555554332 11 2233467899999976666655555
Q ss_pred e--EEEEECCCCCCCCCCCCCCCCceeeecccCceeeecceeee
Q psy4579 324 D--VLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 324 ~--i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p~~ 365 (368)
. +.+.++. ......+..+.+.+...+|+|.+
T Consensus 394 ~~~l~~~~~~-----------g~~~~~l~~~~g~~~~p~wsp~~ 426 (427)
T PRK02889 394 RSVLAAVSSD-----------GRIKQRLSVQGGDVREPSWGPFM 426 (427)
T ss_pred CEEEEEEECC-----------CCceEEeecCCCCCCCCccCCCC
Confidence 4 4444442 22233455677888999999864
|
|
| >KOG2321|consensus | Back alignment and domain information |
|---|
Probab=99.12 E-value=3e-09 Score=94.66 Aligned_cols=177 Identities=17% Similarity=0.227 Sum_probs=118.2
Q ss_pred eeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeecccc-----ceecceeeEEeCC
Q psy4579 118 AQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTA-----VVEVRYGLSWNPS 192 (368)
Q Consensus 118 ~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~-----~v~~~~~i~~~p~ 192 (368)
+.++..+....+.++++..++.. .+|++|+.||.|..||.+....- ..+.....+..|.+ .|+ ++.|+.+
T Consensus 165 GrfL~P~~~~~~~lN~v~in~~h-gLla~Gt~~g~VEfwDpR~ksrv-~~l~~~~~v~s~pg~~~~~svT---al~F~d~ 239 (703)
T KOG2321|consen 165 GRFLNPFETDSGELNVVSINEEH-GLLACGTEDGVVEFWDPRDKSRV-GTLDAASSVNSHPGGDAAPSVT---ALKFRDD 239 (703)
T ss_pred cccccccccccccceeeeecCcc-ceEEecccCceEEEecchhhhhh-eeeecccccCCCccccccCcce---EEEecCC
Confidence 34455555566899999999998 89999999999999999865321 11112222223333 365 9999987
Q ss_pred CCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeeecccccCCCCccceEEEEeecCCcccccccc
Q psy4579 193 LNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDAS 272 (368)
Q Consensus 193 ~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 272 (368)
+-.++.|..+|.|.|||++.... .+..-.+...+|..+.|.+. +.+..+. +
T Consensus 240 -gL~~aVGts~G~v~iyDLRa~~p------l~~kdh~~e~pi~~l~~~~~-------~~q~~v~--S------------- 290 (703)
T KOG2321|consen 240 -GLHVAVGTSTGSVLIYDLRASKP------LLVKDHGYELPIKKLDWQDT-------DQQNKVV--S------------- 290 (703)
T ss_pred -ceeEEeeccCCcEEEEEcccCCc------eeecccCCccceeeeccccc-------CCCceEE--e-------------
Confidence 88999999999999999998732 11122234556777777542 1222221 1
Q ss_pred cccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCC
Q psy4579 273 NYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHP 334 (368)
Q Consensus 273 ~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~ 334 (368)
. ....+.+|+..+|+....+. -...++.+++-|++ .++.+|-+++.+..|-+...+
T Consensus 291 -~--Dk~~~kiWd~~~Gk~~asiE--pt~~lND~C~~p~s-Gm~f~Ane~~~m~~yyiP~LG 346 (703)
T KOG2321|consen 291 -M--DKRILKIWDECTGKPMASIE--PTSDLNDFCFVPGS-GMFFTANESSKMHTYYIPSLG 346 (703)
T ss_pred -c--chHHhhhcccccCCceeecc--ccCCcCceeeecCC-ceEEEecCCCcceeEEccccC
Confidence 1 11225556666676655554 34569999999998 677799999999888876544
|
|
| >KOG0644|consensus | Back alignment and domain information |
|---|
Probab=99.12 E-value=3.2e-10 Score=104.85 Aligned_cols=237 Identities=14% Similarity=0.201 Sum_probs=144.5
Q ss_pred CceeeEecCCcccccCCCCccccccCcceeeeccccCCCCCc-EEEEEEecCCCccccccCCcccCCCCcccCCCCCe-e
Q psy4579 42 PSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQNH-LLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDA-Q 119 (368)
Q Consensus 42 ~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~-~ 119 (368)
.|.|+.|...|.++++|++|..+.||. ..++.......++ ..|..+..+.++..+.++. .|..|++|.+.. .
T Consensus 192 aVyca~fDrtg~~Iitgsdd~lvKiwS--~et~~~lAs~rGhs~ditdlavs~~n~~iaaaS----~D~vIrvWrl~~~~ 265 (1113)
T KOG0644|consen 192 AVYCAIFDRTGRYIITGSDDRLVKIWS--METARCLASCRGHSGDITDLAVSSNNTMIAAAS----NDKVIRVWRLPDGA 265 (1113)
T ss_pred heeeeeeccccceEeecCccceeeeee--ccchhhhccCCCCccccchhccchhhhhhhhcc----cCceEEEEecCCCc
Confidence 488999999999999999999997775 5555555553333 3477777777665555443 578899999864 4
Q ss_pred eeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEE
Q psy4579 120 FDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLS 199 (368)
Q Consensus 120 ~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s 199 (368)
.+..+++|+++|++|+|+|-. +.+.||++++||.+-....-.. .+ ..+.+. ..+. ++.|... +..++|
T Consensus 266 pvsvLrghtgavtaiafsP~~-----sss~dgt~~~wd~r~~~~~y~p-rp-~~~~~~-~~~~---s~~~~~~-~~~f~T 333 (1113)
T KOG0644|consen 266 PVSVLRGHTGAVTAIAFSPRA-----SSSDDGTCRIWDARLEPRIYVP-RP-LKFTEK-DLVD---SILFENN-GDRFLT 333 (1113)
T ss_pred hHHHHhccccceeeeccCccc-----cCCCCCceEeccccccccccCC-CC-CCcccc-ccee---eeecccc-cccccc
Confidence 556688999999999999963 6788999999998721100000 00 000000 1110 2222222 222333
Q ss_pred ee-------------------------------------CCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeee
Q psy4579 200 AS-------------------------------------DDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRL 242 (368)
Q Consensus 200 ~s-------------------------------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~ 242 (368)
|+ .+-.+++|++-++ ...+.+.+|...+..+.+||+
T Consensus 334 gs~d~ea~n~e~~~l~~~~~~lif~t~ssd~~~~~~~ar~~~~~~vwnl~~g-------~l~H~l~ghsd~~yvLd~Hpf 406 (1113)
T KOG0644|consen 334 GSRDGEARNHEFEQLAWRSNLLIFVTRSSDLSSIVVTARNDHRLCVWNLYTG-------QLLHNLMGHSDEVYVLDVHPF 406 (1113)
T ss_pred ccCCcccccchhhHhhhhccceEEEeccccccccceeeeeeeEeeeeecccc-------hhhhhhcccccceeeeeecCC
Confidence 33 3444556666555 234555667777777777652
Q ss_pred ---cccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEe
Q psy4579 243 ---ILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATK 319 (368)
Q Consensus 243 ---~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasg 319 (368)
+..+.+-|+ ...+||.-.|..+.....+ .+.+...+|+++|. -++..
T Consensus 407 n~ri~msag~dg----------------------------st~iwdi~eg~pik~y~~g-h~kl~d~kFSqdgt-s~~ls 456 (1113)
T KOG0644|consen 407 NPRIAMSAGYDG----------------------------STIIWDIWEGIPIKHYFIG-HGKLVDGKFSQDGT-SIALS 456 (1113)
T ss_pred CcHhhhhccCCC----------------------------ceEeeecccCCcceeeecc-cceeeccccCCCCc-eEecC
Confidence 223333333 3444444455555444445 45677789999994 45454
Q ss_pred cCCCeEEEEECCCC
Q psy4579 320 TPSSDVLVFDYTKH 333 (368)
Q Consensus 320 s~Dg~i~iwd~~~~ 333 (368)
..-|.+.|......
T Consensus 457 d~hgql~i~g~gqs 470 (1113)
T KOG0644|consen 457 DDHGQLYILGTGQS 470 (1113)
T ss_pred CCCCceEEeccCCC
Confidence 56688888876543
|
|
| >PRK05137 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=2.5e-09 Score=98.80 Aligned_cols=116 Identities=12% Similarity=0.164 Sum_probs=74.5
Q ss_pred EEEEecCCCccccccCCcccCCCCcccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCCCc--EEEEeCCCCCC
Q psy4579 86 IASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHT--ICLWDINATPK 163 (368)
Q Consensus 86 i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~--v~iwd~~~~~~ 163 (368)
+....|.+++..+....+. .++..|.+|++.+.....+..+.+.+.+.+|+|+|..++++.+.+|. |.+||+.++.
T Consensus 204 v~~p~wSpDG~~lay~s~~-~g~~~i~~~dl~~g~~~~l~~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~- 281 (435)
T PRK05137 204 VLTPRFSPNRQEITYMSYA-NGRPRVYLLDLETGQRELVGNFPGMTFAPRFSPDGRKVVMSLSQGGNTDIYTMDLRSGT- 281 (435)
T ss_pred eEeeEECCCCCEEEEEEec-CCCCEEEEEECCCCcEEEeecCCCcccCcEECCCCCEEEEEEecCCCceEEEEECCCCc-
Confidence 5556665555544433332 34578999998765444555667788899999999334456666766 6666877653
Q ss_pred CCcccccceeeeccccceecceeeEEeCCCCCeEEEee-CCC--cEEEEECCCC
Q psy4579 164 ENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSAS-DDH--TICLWDINAT 214 (368)
Q Consensus 164 ~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s-~dg--~i~iwd~~~~ 214 (368)
...+..+..... ...|+|+ +..|+..+ .+| .|.++|+..+
T Consensus 282 -------~~~Lt~~~~~~~---~~~~spD-G~~i~f~s~~~g~~~Iy~~d~~g~ 324 (435)
T PRK05137 282 -------TTRLTDSPAIDT---SPSYSPD-GSQIVFESDRSGSPQLYVMNADGS 324 (435)
T ss_pred -------eEEccCCCCccC---ceeEcCC-CCEEEEEECCCCCCeEEEEECCCC
Confidence 244554555443 7899999 77776655 344 5777787654
|
|
| >KOG2111|consensus | Back alignment and domain information |
|---|
Probab=99.11 E-value=7.4e-10 Score=91.68 Aligned_cols=177 Identities=16% Similarity=0.179 Sum_probs=110.0
Q ss_pred hhhhhhcCcchheeecccccccCceeeEecCCcccccCCCCccccccCcceee-eccccCC-CCCcEEEEEEecCCCccc
Q psy4579 20 YKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTD-KGTHTSD-EQNHLLIASVQLPNEDAQ 97 (368)
Q Consensus 20 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~i~~~~~~~~~~~ 97 (368)
.-||. -+.+..+....+..||..+...++-=.++ -+ +.+.++.|.-. .-.+..+ ..+..-+.++ .|..+..
T Consensus 77 viIWD---D~k~~~i~el~f~~~I~~V~l~r~riVvv--l~-~~I~VytF~~n~k~l~~~et~~NPkGlC~~-~~~~~k~ 149 (346)
T KOG2111|consen 77 VIIWD---DLKERCIIELSFNSEIKAVKLRRDRIVVV--LE-NKIYVYTFPDNPKLLHVIETRSNPKGLCSL-CPTSNKS 149 (346)
T ss_pred EEEEe---cccCcEEEEEEeccceeeEEEcCCeEEEE--ec-CeEEEEEcCCChhheeeeecccCCCceEee-cCCCCce
Confidence 34566 34556666667778888888877543322 22 23333332210 0111111 1111112221 2222222
Q ss_pred cccCCcccCCCCcccCCCCCeeee---eccccCCCCceeeEecCCCCCeeEEEeCCCc-EEEEeCCCCCCCCccccccee
Q psy4579 98 FDASNYDTDKGGNVQLPNEDAQFD---ASNYDTDKGGYGLSWNPSLNGYLLSASDDHT-ICLWDINATPKENRVIDAKTI 173 (368)
Q Consensus 98 ~~~~~~~~~~~g~i~i~~~~~~~~---~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~-v~iwd~~~~~~~~~~~~~~~~ 173 (368)
+.+ |-.-+-|.|+|-++..... .....|+..|.|++.+-+| .++||+|..|+ |||||..++. .+..
T Consensus 150 ~La--fPg~k~GqvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~G-t~vATaStkGTLIRIFdt~~g~-------~l~E 219 (346)
T KOG2111|consen 150 LLA--FPGFKTGQVQIVDLASTKPNAPSIINAHDSDIACVALNLQG-TLVATASTKGTLIRIFDTEDGT-------LLQE 219 (346)
T ss_pred EEE--cCCCccceEEEEEhhhcCcCCceEEEcccCceeEEEEcCCc-cEEEEeccCcEEEEEEEcCCCc-------Eeee
Confidence 221 2223458888877654333 4566799999999999999 99999999997 6999999875 4556
Q ss_pred eeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCC
Q psy4579 174 FTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATP 215 (368)
Q Consensus 174 ~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~ 215 (368)
++.-.... .+++++|||+ ..+|+.+|+-|++.|+.++...
T Consensus 220 ~RRG~d~A-~iy~iaFSp~-~s~LavsSdKgTlHiF~l~~~~ 259 (346)
T KOG2111|consen 220 LRRGVDRA-DIYCIAFSPN-SSWLAVSSDKGTLHIFSLRDTE 259 (346)
T ss_pred eecCCchh-eEEEEEeCCC-ccEEEEEcCCCeEEEEEeecCC
Confidence 65433332 2379999999 9999999999999999998753
|
|
| >KOG0280|consensus | Back alignment and domain information |
|---|
Probab=99.10 E-value=2.5e-09 Score=87.70 Aligned_cols=167 Identities=15% Similarity=0.128 Sum_probs=116.4
Q ss_pred CCCCcccCCCCCeeeee-cccc---CC---CCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccc
Q psy4579 106 DKGGNVQLPNEDAQFDA-SNYD---TD---KGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHT 178 (368)
Q Consensus 106 ~~~g~i~i~~~~~~~~~-~~~~---h~---~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~ 178 (368)
...|.|.++..+..... .+.+ -+ -...++.|++.+ ..++++-.+|.+.+-+..... ++..+.+++|.
T Consensus 92 ~a~G~i~~~r~~~~~ss~~L~~ls~~ki~~~~~lslD~~~~~-~~i~vs~s~G~~~~v~~t~~~-----le~vq~wk~He 165 (339)
T KOG0280|consen 92 HARGQIQLYRNDEDESSVHLRGLSSKKISVVEALSLDISTSG-TKIFVSDSRGSISGVYETEMV-----LEKVQTWKVHE 165 (339)
T ss_pred cccceEEEEeeccceeeeeecccchhhhhheeeeEEEeeccC-ceEEEEcCCCcEEEEecceee-----eeecccccccc
Confidence 35677777765432211 1111 11 134578899998 789999899999855544332 12346889999
Q ss_pred cceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeeecccccCCCCccceEEE
Q psy4579 179 AVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIA 258 (368)
Q Consensus 179 ~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~ 258 (368)
.+. |...|+..+.+++.+||.|+.+..||+|... .+ .|+.
T Consensus 166 ~E~---Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~----------~~----------i~~n----------------- 205 (339)
T KOG0280|consen 166 FEA---WTAKFSDKEPNLVYTGGDDGSLSCWDIRIPK----------TF----------IWHN----------------- 205 (339)
T ss_pred eee---eeeecccCCCceEEecCCCceEEEEEecCCc----------ce----------eeec-----------------
Confidence 998 7999998778999999999999999998531 01 0110
Q ss_pred EeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCC
Q psy4579 259 SVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPD 338 (368)
Q Consensus 259 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~ 338 (368)
. .-|...|.++.-+|..+.+++||+.|..|++||.|+.+
T Consensus 206 ------------------------------------~-kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRnm~---- 244 (339)
T KOG0280|consen 206 ------------------------------------S-KVHTSGVVSIYSSPPKPTYIATGSYDECIRVLDTRNMG---- 244 (339)
T ss_pred ------------------------------------c-eeeecceEEEecCCCCCceEEEeccccceeeeehhccc----
Confidence 1 14888899999999888999999999999999999643
Q ss_pred CCCCCCCceeeecccCceeeecceeee
Q psy4579 339 PNGECHPDLRLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 339 ~~~~~~~~~~~~gh~~~V~~l~w~p~~ 365 (368)
+|+.. ..-.+.|+.+.|+|.-
T Consensus 245 -----kPl~~-~~v~GGVWRi~~~p~~ 265 (339)
T KOG0280|consen 245 -----KPLFK-AKVGGGVWRIKHHPEI 265 (339)
T ss_pred -----Ccccc-CccccceEEEEecchh
Confidence 33221 1223788888888854
|
|
| >KOG4497|consensus | Back alignment and domain information |
|---|
Probab=99.10 E-value=6.5e-11 Score=98.26 Aligned_cols=222 Identities=15% Similarity=0.145 Sum_probs=130.7
Q ss_pred eEecCCcccccCCCCccccccCcceeeeccccCCCCCcEEEEEEecCCCccccccCCcccCCCCcccCCCCCe-eeeecc
Q psy4579 46 AQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDA-QFDASN 124 (368)
Q Consensus 46 ~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~-~~~~~~ 124 (368)
+.|+|+|+++|+.++-+ +.|++.....--+...- -..|.-+.|..+.-.+.+..| .++.|++|++.. .-..+.
T Consensus 14 c~fSp~g~yiAs~~~yr-lviRd~~tlq~~qlf~c--ldki~yieW~ads~~ilC~~y---k~~~vqvwsl~Qpew~ckI 87 (447)
T KOG4497|consen 14 CSFSPCGNYIASLSRYR-LVIRDSETLQLHQLFLC--LDKIVYIEWKADSCHILCVAY---KDPKVQVWSLVQPEWYCKI 87 (447)
T ss_pred eeECCCCCeeeeeeeeE-EEEeccchhhHHHHHHH--HHHhhheeeeccceeeeeeee---ccceEEEEEeecceeEEEe
Confidence 88999999999987763 33343222211111110 112334445444444455554 489999999875 334455
Q ss_pred ccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeecc-ccceecceeeEEeCCCCCeEEEeeCC
Q psy4579 125 YDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGH-TAVVEVRYGLSWNPSLNGYLLSASDD 203 (368)
Q Consensus 125 ~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h-~~~v~~~~~i~~~p~~~~~l~s~s~d 203 (368)
..-.+++.+++|||+|..+|.+...|-.|.+|.+.+.+. .+-.| ...+. .++|+|+ +++.+.++.-
T Consensus 88 deg~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~---------~~~~~pK~~~k---g~~f~~d-g~f~ai~sRr 154 (447)
T KOG4497|consen 88 DEGQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKG---------YLLPHPKTNVK---GYAFHPD-GQFCAILSRR 154 (447)
T ss_pred ccCCCcceeeeECCCcceEeeeecceeEEEEEEecccee---------EEecccccCce---eEEECCC-Cceeeeeecc
Confidence 566788999999999966777888899999999988642 22222 22233 8999999 8888887754
Q ss_pred CcEEEEECCCCCCCCccccceeeeecccccEeEEEEeeecccccCCCCccceEEEEeecCCcccccccccccCCCCCccc
Q psy4579 204 HTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGG 283 (368)
Q Consensus 204 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 283 (368)
.......+... +.+..++.+.-.+-..+.+.|+|. .+.+.+ ||..
T Consensus 155 DCkdyv~i~~c----~~W~ll~~f~~dT~DltgieWsPd---------g~~laV----------------wd~~------ 199 (447)
T KOG4497|consen 155 DCKDYVQISSC----KAWILLKEFKLDTIDLTGIEWSPD---------GNWLAV----------------WDNV------ 199 (447)
T ss_pred cHHHHHHHHhh----HHHHHHHhcCCCcccccCceECCC---------CcEEEE----------------ecch------
Confidence 22111111110 112233344444444556667651 111111 1110
Q ss_pred ccCCCCceeeeeecCcc-cceeEEEEeCCCCcEEEEecCCCeEEEEE
Q psy4579 284 FGSVSGKIEIEIKINHE-GEVNRARYMPQNPCVIATKTPSSDVLVFD 329 (368)
Q Consensus 284 ~~~~~~~~~~~~~~~h~-~~i~~~~~~p~~~~~lasgs~Dg~i~iwd 329 (368)
+.......|. -++..++|+|.+ .+||.|+.|+.+|+-+
T Consensus 200 -------Leykv~aYe~~lG~k~v~wsP~~-qflavGsyD~~lrvln 238 (447)
T KOG4497|consen 200 -------LEYKVYAYERGLGLKFVEWSPCN-QFLAVGSYDQMLRVLN 238 (447)
T ss_pred -------hhheeeeeeeccceeEEEecccc-ceEEeeccchhhhhhc
Confidence 0111111233 478899999999 7999999999998865
|
|
| >PRK05137 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=7.5e-09 Score=95.61 Aligned_cols=112 Identities=13% Similarity=0.121 Sum_probs=76.7
Q ss_pred CcccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeC---CCcEEEEeCCCCCCCCcccccceeeeccccceecce
Q psy4579 109 GNVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASD---DHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRY 185 (368)
Q Consensus 109 g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~---dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 185 (368)
..|.+++.++.....+..|...+.+.+|+|+| +.|+..+. +..|.+||+.++. ...+..+.+.+.
T Consensus 182 ~~l~~~d~dg~~~~~lt~~~~~v~~p~wSpDG-~~lay~s~~~g~~~i~~~dl~~g~--------~~~l~~~~g~~~--- 249 (435)
T PRK05137 182 KRLAIMDQDGANVRYLTDGSSLVLTPRFSPNR-QEITYMSYANGRPRVYLLDLETGQ--------RELVGNFPGMTF--- 249 (435)
T ss_pred eEEEEECCCCCCcEEEecCCCCeEeeEECCCC-CEEEEEEecCCCCEEEEEECCCCc--------EEEeecCCCccc---
Confidence 36778888776666677788899999999999 77777653 4689999998763 234445555553
Q ss_pred eeEEeCCCCCe-EEEeeCCCc--EEEEECCCCCCCCccccceeeeecccccEeEEEEee
Q psy4579 186 GLSWNPSLNGY-LLSASDDHT--ICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR 241 (368)
Q Consensus 186 ~i~~~p~~~~~-l~s~s~dg~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~ 241 (368)
..+|+|+ +.. +++.+.++. |.+||+.++. ...+..+........|+|
T Consensus 250 ~~~~SPD-G~~la~~~~~~g~~~Iy~~d~~~~~--------~~~Lt~~~~~~~~~~~sp 299 (435)
T PRK05137 250 APRFSPD-GRKVVMSLSQGGNTDIYTMDLRSGT--------TTRLTDSPAIDTSPSYSP 299 (435)
T ss_pred CcEECCC-CCEEEEEEecCCCceEEEEECCCCc--------eEEccCCCCccCceeEcC
Confidence 8899999 655 456677766 6666887652 233333444445566654
|
|
| >KOG2139|consensus | Back alignment and domain information |
|---|
Probab=99.06 E-value=4.2e-09 Score=88.78 Aligned_cols=187 Identities=15% Similarity=0.179 Sum_probs=115.7
Q ss_pred CCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeee-ccccceecceeeEEeCCCCCeEEEeeCCCcE
Q psy4579 128 DKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFT-GHTAVVEVRYGLSWNPSLNGYLLSASDDHTI 206 (368)
Q Consensus 128 ~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i 206 (368)
+-.+.-++|++.- ..+|++..|-.|++||-+.. ....++ .-...|+ +++|-|.....|+.|+..| |
T Consensus 98 ~~dlr~~aWhqH~-~~fava~nddvVriy~ksst--------~pt~Lks~sQrnvt---clawRPlsaselavgCr~g-I 164 (445)
T KOG2139|consen 98 EIDLRGVAWHQHI-IAFAVATNDDVVRIYDKSST--------CPTKLKSVSQRNVT---CLAWRPLSASELAVGCRAG-I 164 (445)
T ss_pred hcceeeEeechhh-hhhhhhccCcEEEEeccCCC--------CCceecchhhccee---EEEeccCCcceeeeeecce-e
Confidence 4567789999976 78999999999999997652 223333 2234565 9999998677777776655 8
Q ss_pred EEEECCCCCCCCcccc-------ceeeeecccccEeEEEEeeecccccCCCCccceEEEEeecCCcccccccccccCCCC
Q psy4579 207 CLWDINATPKENRVID-------AKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKG 279 (368)
Q Consensus 207 ~iwd~~~~~~~~~~~~-------~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 279 (368)
++|.........+..+ .+....+| .+|+++.|++. +..+....++. .
T Consensus 165 ciW~~s~tln~~r~~~~~s~~~~qvl~~pgh-~pVtsmqwn~d-----------------------gt~l~tAS~gs--s 218 (445)
T KOG2139|consen 165 CIWSDSRTLNANRNIRMMSTHHLQVLQDPGH-NPVTSMQWNED-----------------------GTILVTASFGS--S 218 (445)
T ss_pred EEEEcCcccccccccccccccchhheeCCCC-ceeeEEEEcCC-----------------------CCEEeecccCc--c
Confidence 8997654322221100 01123344 67888888751 11111112211 1
Q ss_pred CcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeecccCceeee
Q psy4579 280 DFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIE 359 (368)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l 359 (368)
.+.+|+..++....... -..+.++-+.|+|++..+| .++-|+..++|+..+.- .+++ +.--.+.|+..
T Consensus 219 si~iWdpdtg~~~pL~~-~glgg~slLkwSPdgd~lf-aAt~davfrlw~e~q~w-------t~er---w~lgsgrvqta 286 (445)
T KOG2139|consen 219 SIMIWDPDTGQKIPLIP-KGLGGFSLLKWSPDGDVLF-AATCDAVFRLWQENQSW-------TKER---WILGSGRVQTA 286 (445)
T ss_pred eEEEEcCCCCCcccccc-cCCCceeeEEEcCCCCEEE-Eecccceeeeehhcccc-------eecc---eeccCCceeee
Confidence 24455555555443332 3567888999999997666 55899999999765421 1222 22223489999
Q ss_pred cceeee
Q psy4579 360 GTYNCY 365 (368)
Q Consensus 360 ~w~p~~ 365 (368)
.|+||.
T Consensus 287 cWspcG 292 (445)
T KOG2139|consen 287 CWSPCG 292 (445)
T ss_pred eecCCC
Confidence 999985
|
|
| >PRK01742 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.05 E-value=8.6e-10 Score=101.54 Aligned_cols=156 Identities=12% Similarity=0.213 Sum_probs=94.8
Q ss_pred ccCceeeEecCCcccccCCCCcc-ccccCcceeeeccc--cCCCCCcEEEEEEecCCCccccccCCcccCCCCcccCC--
Q psy4579 40 EWPSLTAQWLPDVTSVQLPNEDA-QFDASNYDTDKGTH--TSDEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLP-- 114 (368)
Q Consensus 40 ~~~~~~~~~~p~~~~l~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~-- 114 (368)
..++.+.+|+|||++|++.+.++ .-.++.+++..|.. ......+ .....|.+++..+.... +.+|.+.||
T Consensus 203 ~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l~~~~g~--~~~~~wSPDG~~La~~~---~~~g~~~Iy~~ 277 (429)
T PRK01742 203 SQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVVASFRGH--NGAPAFSPDGSRLAFAS---SKDGVLNIYVM 277 (429)
T ss_pred CCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEEecCCCc--cCceeECCCCCEEEEEE---ecCCcEEEEEE
Confidence 45788999999999999876442 22235555554432 1111111 12345655544433222 235655554
Q ss_pred CCCeeeeeccccCCCCceeeEecCCCCCeeE-EEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCC
Q psy4579 115 NEDAQFDASNYDTDKGGYGLSWNPSLNGYLL-SASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSL 193 (368)
Q Consensus 115 ~~~~~~~~~~~~h~~~v~~l~~sp~~~~~la-sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~ 193 (368)
+.++.....+..+...+.+..|+|+| +.|+ +...+|...||++...... ...+ .+.. . ...|+|+
T Consensus 278 d~~~~~~~~lt~~~~~~~~~~wSpDG-~~i~f~s~~~g~~~I~~~~~~~~~------~~~l-~~~~-~----~~~~SpD- 343 (429)
T PRK01742 278 GANGGTPSQLTSGAGNNTEPSWSPDG-QSILFTSDRSGSPQVYRMSASGGG------ASLV-GGRG-Y----SAQISAD- 343 (429)
T ss_pred ECCCCCeEeeccCCCCcCCEEECCCC-CEEEEEECCCCCceEEEEECCCCC------eEEe-cCCC-C----CccCCCC-
Confidence 55555455556677778899999999 6555 4446888999987643221 1222 3333 2 6789999
Q ss_pred CCeEEEeeCCCcEEEEECCCCC
Q psy4579 194 NGYLLSASDDHTICLWDINATP 215 (368)
Q Consensus 194 ~~~l~s~s~dg~i~iwd~~~~~ 215 (368)
+..|+..+.++ +.+||+.++.
T Consensus 344 G~~ia~~~~~~-i~~~Dl~~g~ 364 (429)
T PRK01742 344 GKTLVMINGDN-VVKQDLTSGS 364 (429)
T ss_pred CCEEEEEcCCC-EEEEECCCCC
Confidence 88888877765 5559998763
|
|
| >KOG1272|consensus | Back alignment and domain information |
|---|
Probab=99.01 E-value=3e-10 Score=98.39 Aligned_cols=173 Identities=14% Similarity=0.215 Sum_probs=121.3
Q ss_pred ccCceeeEecCCcccccCCCCccccccCcceeeeccccCCCCCcEEEEEEec-CCCccccccCCcccCCCCcccCCCCC-
Q psy4579 40 EWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQNHLLIASVQL-PNEDAQFDASNYDTDKGGNVQLPNED- 117 (368)
Q Consensus 40 ~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~g~i~i~~~~- 117 (368)
.-.|.+++|..+-+++|++-.. .+ +.|+- .|+..--...+..+..+.| |-+- .+.++ +..|.++--|..
T Consensus 170 ~Etv~Dv~~LHneq~~AVAQK~-y~--yvYD~-~GtElHClk~~~~v~rLeFLPyHf-LL~~~----~~~G~L~Y~DVS~ 240 (545)
T KOG1272|consen 170 METVRDVTFLHNEQFFAVAQKK-YV--YVYDN-NGTELHCLKRHIRVARLEFLPYHF-LLVAA----SEAGFLKYQDVST 240 (545)
T ss_pred hhhhhhhhhhcchHHHHhhhhc-eE--EEecC-CCcEEeehhhcCchhhhcccchhh-eeeec----ccCCceEEEeech
Confidence 3457788888888888877443 22 23332 2343333344555666666 4332 22222 235666666665
Q ss_pred eeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeE
Q psy4579 118 AQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYL 197 (368)
Q Consensus 118 ~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l 197 (368)
++.+..+..-.+.+..++-+|-+ ..+-+|...|+|.+|...... ++..+.+|.++|+ +|++.++ +.++
T Consensus 241 GklVa~~~t~~G~~~vm~qNP~N-aVih~GhsnGtVSlWSP~ske-------PLvKiLcH~g~V~---siAv~~~-G~YM 308 (545)
T KOG1272|consen 241 GKLVASIRTGAGRTDVMKQNPYN-AVIHLGHSNGTVSLWSPNSKE-------PLVKILCHRGPVS---SIAVDRG-GRYM 308 (545)
T ss_pred hhhhHHHHccCCccchhhcCCcc-ceEEEcCCCceEEecCCCCcc-------hHHHHHhcCCCcc---eEEECCC-CcEE
Confidence 46666777778899999999997 899999999999999987653 6777888999997 9999998 9999
Q ss_pred EEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee
Q psy4579 198 LSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR 241 (368)
Q Consensus 198 ~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~ 241 (368)
||.+.|..++|||+|.-.. +.++.. ..+...++++.
T Consensus 309 aTtG~Dr~~kIWDlR~~~q-------l~t~~t-p~~a~~ls~Sq 344 (545)
T KOG1272|consen 309 ATTGLDRKVKIWDLRNFYQ-------LHTYRT-PHPASNLSLSQ 344 (545)
T ss_pred eecccccceeEeeeccccc-------cceeec-CCCcccccccc
Confidence 9999999999999998632 223322 34556677764
|
|
| >KOG1963|consensus | Back alignment and domain information |
|---|
Probab=98.99 E-value=2.8e-08 Score=92.75 Aligned_cols=168 Identities=11% Similarity=0.084 Sum_probs=109.4
Q ss_pred cccCceeeEecCCcccccCCCCccccccCccee-eeccccCC--CCCcEEEEEEecCCCccccccCCcccCCCCcccCCC
Q psy4579 39 LEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDT-DKGTHTSD--EQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPN 115 (368)
Q Consensus 39 ~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~ 115 (368)
+..++.|++++|.++.+|+|-.||.+.+|.--- .....+.. +=++..+.++.|...+..+..++ ..|-+.+|.
T Consensus 204 Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G~~LlSGG----~E~VLv~Wq 279 (792)
T KOG1963|consen 204 HTFNITCVALSPNERYLAAGDSDGRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSDGAYLLSGG----REGVLVLWQ 279 (792)
T ss_pred hcccceeEEeccccceEEEeccCCcEEEEeccccccccccceEEEecccccceeEEecCCceEeecc----cceEEEEEe
Confidence 445689999999999999999999986664111 11111111 11234567777766555444443 467788899
Q ss_pred CCeeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccc---ee-eeccccceecceeeEEeC
Q psy4579 116 EDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAK---TI-FTGHTAVVEVRYGLSWNP 191 (368)
Q Consensus 116 ~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~---~~-~~~h~~~v~~~~~i~~~p 191 (368)
+.+....-+-.-..+|..+.++|++ ...+....|..|.+-...+......+..+. .. -.+..+-. ..++++|
T Consensus 280 ~~T~~kqfLPRLgs~I~~i~vS~ds-~~~sl~~~DNqI~li~~~dl~~k~tIsgi~~~~~~~k~~~~~l~---t~~~idp 355 (792)
T KOG1963|consen 280 LETGKKQFLPRLGSPILHIVVSPDS-DLYSLVLEDNQIHLIKASDLEIKSTISGIKPPTPSTKTRPQSLT---TGVSIDP 355 (792)
T ss_pred ecCCCcccccccCCeeEEEEEcCCC-CeEEEEecCceEEEEeccchhhhhhccCccCCCccccccccccc---eeEEEcC
Confidence 8776533333456789999999998 888888889999998775543211110000 11 11122233 3788888
Q ss_pred CCCCeEEEeeCCCcEEEEECCCCC
Q psy4579 192 SLNGYLLSASDDHTICLWDINATP 215 (368)
Q Consensus 192 ~~~~~l~s~s~dg~i~iwd~~~~~ 215 (368)
. .+.++-.+..|.|++||+-+..
T Consensus 356 r-~~~~vln~~~g~vQ~ydl~td~ 378 (792)
T KOG1963|consen 356 R-TNSLVLNGHPGHVQFYDLYTDS 378 (792)
T ss_pred C-CCceeecCCCceEEEEeccccc
Confidence 6 7788888999999999987754
|
|
| >KOG0974|consensus | Back alignment and domain information |
|---|
Probab=98.99 E-value=4.2e-09 Score=99.84 Aligned_cols=176 Identities=17% Similarity=0.156 Sum_probs=126.8
Q ss_pred CCcccCCCCCeeeeeccccCCCCce-----eeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeecccccee
Q psy4579 108 GGNVQLPNEDAQFDASNYDTDKGGY-----GLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVE 182 (368)
Q Consensus 108 ~g~i~i~~~~~~~~~~~~~h~~~v~-----~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~ 182 (368)
+..+-+|+.....+.....+...+. -+-++++. -++++|+.-+.|.+|+..... ....+.||.+.+
T Consensus 108 ~ns~~i~d~~~~~~~~~i~~~er~~l~~~~~~g~s~~~-~~i~~gsv~~~iivW~~~~dn-------~p~~l~GHeG~i- 178 (967)
T KOG0974|consen 108 RNSLLIRDSKNSSVLSKIQSDERCTLYSSLIIGDSAEE-LYIASGSVFGEIIVWKPHEDN-------KPIRLKGHEGSI- 178 (967)
T ss_pred CceEEEEecccCceehhcCCCceEEEEeEEEEeccCcE-EEEEeccccccEEEEeccccC-------CcceecccCCce-
Confidence 3445555555444444444444322 12234443 689999999999999987322 123688999999
Q ss_pred cceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeeecccccCCCCccceEEEEeec
Q psy4579 183 VRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQL 262 (368)
Q Consensus 183 ~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~ 262 (368)
+++.|+-+ +.+++|.|+|.++++|++.+.+.. ....-+|+..|..+.|.++.+.+.+.|-+.++|-..
T Consensus 179 --F~i~~s~d-g~~i~s~SdDRsiRlW~i~s~~~~------~~~~fgHsaRvw~~~~~~n~i~t~gedctcrvW~~~--- 246 (967)
T KOG0974|consen 179 --FSIVTSLD-GRYIASVSDDRSIRLWPIDSREVL------GCTGFGHSARVWACCFLPNRIITVGEDCTCRVWGVN--- 246 (967)
T ss_pred --EEEEEccC-CcEEEEEecCcceeeeeccccccc------CcccccccceeEEEEeccceeEEeccceEEEEEecc---
Confidence 69999998 999999999999999999987532 235567999999999999888888888777777222
Q ss_pred CCcccccccccccCCCCCcccccCCCCceeeeeecCccc-ceeEEEEeCCCCcEEEEecCCCeEEEEECCC
Q psy4579 263 PNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEG-EVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 263 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~-~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
+.....+. +|.+ .|..++..+.. -+++|++.|+.+++||+..
T Consensus 247 --------------------------~~~l~~y~-~h~g~~iw~~~~~~~~-~~~vT~g~Ds~lk~~~l~~ 289 (967)
T KOG0974|consen 247 --------------------------GTQLEVYD-EHSGKGIWKIAVPIGV-IIKVTGGNDSTLKLWDLNG 289 (967)
T ss_pred --------------------------cceehhhh-hhhhcceeEEEEcCCc-eEEEeeccCcchhhhhhhc
Confidence 11111222 5544 68889998888 6788999999999999865
|
|
| >PRK03629 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.98 E-value=5.1e-08 Score=89.72 Aligned_cols=111 Identities=8% Similarity=0.073 Sum_probs=71.8
Q ss_pred cccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEe---CCCcEEEEeCCCCCCCCcccccceeeeccccceeccee
Q psy4579 110 NVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSAS---DDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYG 186 (368)
Q Consensus 110 ~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~---~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 186 (368)
.|.++|.++.....+..+...+.+.+|+|+| +.||..+ .+..+.+|++.++.. ..+....+.+. .
T Consensus 180 ~l~~~d~dg~~~~~lt~~~~~~~~p~wSPDG-~~la~~s~~~g~~~i~i~dl~~G~~--------~~l~~~~~~~~---~ 247 (429)
T PRK03629 180 ELRVSDYDGYNQFVVHRSPQPLMSPAWSPDG-SKLAYVTFESGRSALVIQTLANGAV--------RQVASFPRHNG---A 247 (429)
T ss_pred eEEEEcCCCCCCEEeecCCCceeeeEEcCCC-CEEEEEEecCCCcEEEEEECCCCCe--------EEccCCCCCcC---C
Confidence 5778888775555555677789999999999 7777554 245799999987632 22222223333 7
Q ss_pred eEEeCCCCCeEEE-eeCCC--cEEEEECCCCCCCCccccceeeeecccccEeEEEEee
Q psy4579 187 LSWNPSLNGYLLS-ASDDH--TICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR 241 (368)
Q Consensus 187 i~~~p~~~~~l~s-~s~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~ 241 (368)
..|+|+ +..|+. .+.+| .|.+||+.++. ...+..+...+....|+|
T Consensus 248 ~~~SPD-G~~La~~~~~~g~~~I~~~d~~tg~--------~~~lt~~~~~~~~~~wSP 296 (429)
T PRK03629 248 PAFSPD-GSKLAFALSKTGSLNLYVMDLASGQ--------IRQVTDGRSNNTEPTWFP 296 (429)
T ss_pred eEECCC-CCEEEEEEcCCCCcEEEEEECCCCC--------EEEccCCCCCcCceEECC
Confidence 899999 666654 45555 48889987753 222333334456677765
|
|
| >PRK11028 6-phosphogluconolactonase; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=5.6e-08 Score=86.61 Aligned_cols=98 Identities=14% Similarity=0.113 Sum_probs=61.2
Q ss_pred CCcccCCCCCe--ee-eeccccCCCCceeeEecCCCCCeeEEEe-CCCcEEEEeCCCCCCCCcccccceeeeccccceec
Q psy4579 108 GGNVQLPNEDA--QF-DASNYDTDKGGYGLSWNPSLNGYLLSAS-DDHTICLWDINATPKENRVIDAKTIFTGHTAVVEV 183 (368)
Q Consensus 108 ~g~i~i~~~~~--~~-~~~~~~h~~~v~~l~~sp~~~~~lasg~-~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~ 183 (368)
++.|.+|+.+. .. ........+....+.|+|++ +.|++++ .++.|.+|++++..... .....+.+...+
T Consensus 56 ~~~i~~~~~~~~g~l~~~~~~~~~~~p~~i~~~~~g-~~l~v~~~~~~~v~v~~~~~~g~~~---~~~~~~~~~~~~--- 128 (330)
T PRK11028 56 EFRVLSYRIADDGALTFAAESPLPGSPTHISTDHQG-RFLFSASYNANCVSVSPLDKDGIPV---APIQIIEGLEGC--- 128 (330)
T ss_pred CCcEEEEEECCCCceEEeeeecCCCCceEEEECCCC-CEEEEEEcCCCeEEEEEECCCCCCC---CceeeccCCCcc---
Confidence 57777777642 22 11222234456789999999 7666665 58999999997432110 112222332332
Q ss_pred ceeeEEeCCCCCeE-EEeeCCCcEEEEECCCC
Q psy4579 184 RYGLSWNPSLNGYL-LSASDDHTICLWDINAT 214 (368)
Q Consensus 184 ~~~i~~~p~~~~~l-~s~s~dg~i~iwd~~~~ 214 (368)
.+++++|+ ++++ ++...++.|.+||+.+.
T Consensus 129 -~~~~~~p~-g~~l~v~~~~~~~v~v~d~~~~ 158 (330)
T PRK11028 129 -HSANIDPD-NRTLWVPCLKEDRIRLFTLSDD 158 (330)
T ss_pred -cEeEeCCC-CCEEEEeeCCCCEEEEEEECCC
Confidence 28889998 6665 55667799999999763
|
|
| >PRK04792 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.95 E-value=5.6e-08 Score=89.82 Aligned_cols=220 Identities=16% Similarity=0.138 Sum_probs=114.2
Q ss_pred cccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeC-CC--cEEEEeCCCCCCCCcccccceeeeccccceeccee
Q psy4579 110 NVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASD-DH--TICLWDINATPKENRVIDAKTIFTGHTAVVEVRYG 186 (368)
Q Consensus 110 ~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~-dg--~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 186 (368)
.+.+++.++.....+..+...+.+.+|+|+| +.|+..+. ++ .|.+||+.++.. ..+....+.. ..
T Consensus 199 ~l~i~d~dG~~~~~l~~~~~~~~~p~wSPDG-~~La~~s~~~g~~~L~~~dl~tg~~--------~~lt~~~g~~---~~ 266 (448)
T PRK04792 199 QLMIADYDGYNEQMLLRSPEPLMSPAWSPDG-RKLAYVSFENRKAEIFVQDIYTQVR--------EKVTSFPGIN---GA 266 (448)
T ss_pred EEEEEeCCCCCceEeecCCCcccCceECCCC-CEEEEEEecCCCcEEEEEECCCCCe--------EEecCCCCCc---CC
Confidence 4455566654444455667788999999999 77766543 33 588888877532 2222222223 27
Q ss_pred eEEeCCCCCeE-EEeeCCCc--EEEEECCCCCCCCccccceeeeecccccEeEEEEee---ecccccCCCCccceEEEEe
Q psy4579 187 LSWNPSLNGYL-LSASDDHT--ICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR---LILGTHTSDEQNHLLIASV 260 (368)
Q Consensus 187 i~~~p~~~~~l-~s~s~dg~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~---~~~~~~~~d~~~~~~~~~~ 260 (368)
..|+|+ ++.| ++.+.+|. |.++|+.++. ...+..+.......+|++ .++.+...++...++....
T Consensus 267 ~~wSPD-G~~La~~~~~~g~~~Iy~~dl~tg~--------~~~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl 337 (448)
T PRK04792 267 PRFSPD-GKKLALVLSKDGQPEIYVVDIATKA--------LTRITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNL 337 (448)
T ss_pred eeECCC-CCEEEEEEeCCCCeEEEEEECCCCC--------eEECccCCCCccceEECCCCCEEEEEECCCCCceEEEEEC
Confidence 899999 6655 45677775 6677877652 122333333344566654 2222222233334443332
Q ss_pred e------------------cCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCC
Q psy4579 261 Q------------------LPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPS 322 (368)
Q Consensus 261 ~------------------~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~D 322 (368)
. +.++++.+.....+.....+..+++.++.... +. .. .......|+|+|..++.+...+
T Consensus 338 ~~g~~~~Lt~~g~~~~~~~~SpDG~~l~~~~~~~g~~~I~~~dl~~g~~~~-lt-~~-~~d~~ps~spdG~~I~~~~~~~ 414 (448)
T PRK04792 338 ASGKVSRLTFEGEQNLGGSITPDGRSMIMVNRTNGKFNIARQDLETGAMQV-LT-ST-RLDESPSVAPNGTMVIYSTTYQ 414 (448)
T ss_pred CCCCEEEEecCCCCCcCeeECCCCCEEEEEEecCCceEEEEEECCCCCeEE-cc-CC-CCCCCceECCCCCEEEEEEecC
Confidence 1 11111111111111111122233444443321 11 11 1122457999997676666556
Q ss_pred Ce--EEEEECCCCCCCCCCCCCCCCceeeecccCceeeecceee
Q psy4579 323 SD--VLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYNC 364 (368)
Q Consensus 323 g~--i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p~ 364 (368)
|. +.+++.. ......+..+.+.+...+|+|.
T Consensus 415 g~~~l~~~~~~-----------G~~~~~l~~~~g~~~~p~Wsp~ 447 (448)
T PRK04792 415 GKQVLAAVSID-----------GRFKARLPAGQGEVKSPAWSPF 447 (448)
T ss_pred CceEEEEEECC-----------CCceEECcCCCCCcCCCccCCC
Confidence 54 5666654 2223345556677889999985
|
|
| >PRK00178 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.92 E-value=1.1e-07 Score=88.05 Aligned_cols=221 Identities=13% Similarity=0.132 Sum_probs=117.1
Q ss_pred cccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCC---CcEEEEeCCCCCCCCcccccceeeeccccceeccee
Q psy4579 110 NVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDD---HTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYG 186 (368)
Q Consensus 110 ~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~d---g~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 186 (368)
.+.+++.++.....+..+...+...+|+|+| +.|+..+.+ ..|.+||+.++.. ..+....+.+. .
T Consensus 180 ~l~~~d~~g~~~~~l~~~~~~~~~p~wSpDG-~~la~~s~~~~~~~l~~~~l~~g~~--------~~l~~~~g~~~---~ 247 (430)
T PRK00178 180 TLQRSDYDGARAVTLLQSREPILSPRWSPDG-KRIAYVSFEQKRPRIFVQNLDTGRR--------EQITNFEGLNG---A 247 (430)
T ss_pred EEEEECCCCCCceEEecCCCceeeeeECCCC-CEEEEEEcCCCCCEEEEEECCCCCE--------EEccCCCCCcC---C
Confidence 4666777765555566677889999999999 777766543 3688899987642 22222233342 7
Q ss_pred eEEeCCCCCeEE-EeeCCC--cEEEEECCCCCCCCccccceeeeecccccEeEEEEee---ecccccCCCCccceEEEEe
Q psy4579 187 LSWNPSLNGYLL-SASDDH--TICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR---LILGTHTSDEQNHLLIASV 260 (368)
Q Consensus 187 i~~~p~~~~~l~-s~s~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~---~~~~~~~~d~~~~~~~~~~ 260 (368)
..|+|+ +..|+ +.+.+| .|.+||+.++.. ..+..+........|++ .++.+...++...++....
T Consensus 248 ~~~SpD-G~~la~~~~~~g~~~Iy~~d~~~~~~--------~~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~ 318 (430)
T PRK00178 248 PAWSPD-GSKLAFVLSKDGNPEIYVMDLASRQL--------SRVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNV 318 (430)
T ss_pred eEECCC-CCEEEEEEccCCCceEEEEECCCCCe--------EEcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEEC
Confidence 899999 66655 555566 577889887531 22222333334455653 1222222222333433321
Q ss_pred e------------------cCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCC
Q psy4579 261 Q------------------LPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPS 322 (368)
Q Consensus 261 ~------------------~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~D 322 (368)
. +++++..+.....+.....+..+++.+++.... .+........|+|+|..++.+...+
T Consensus 319 ~~g~~~~lt~~~~~~~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~tg~~~~l---t~~~~~~~p~~spdg~~i~~~~~~~ 395 (430)
T PRK00178 319 NGGRAERVTFVGNYNARPRLSADGKTLVMVHRQDGNFHVAAQDLQRGSVRIL---TDTSLDESPSVAPNGTMLIYATRQQ 395 (430)
T ss_pred CCCCEEEeecCCCCccceEECCCCCEEEEEEccCCceEEEEEECCCCCEEEc---cCCCCCCCceECCCCCEEEEEEecC
Confidence 1 111111111111111111233445555443221 1122223468999996666665555
Q ss_pred Ce--EEEEECCCCCCCCCCCCCCCCceeeecccCceeeecceeee
Q psy4579 323 SD--VLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 323 g~--i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p~~ 365 (368)
|. +.+.++.. .....+..+.+.+...+|+|.+
T Consensus 396 g~~~l~~~~~~g-----------~~~~~l~~~~g~~~~p~ws~~~ 429 (430)
T PRK00178 396 GRGVLMLVSING-----------RVRLPLPTAQGEVREPSWSPYL 429 (430)
T ss_pred CceEEEEEECCC-----------CceEECcCCCCCcCCCccCCCC
Confidence 44 55555531 2222344556678889999865
|
|
| >PRK04922 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.91 E-value=9.1e-09 Score=94.95 Aligned_cols=159 Identities=11% Similarity=0.079 Sum_probs=93.4
Q ss_pred ccCceeeEecCCcccccCCCCcc-ccccCcceeeeccccC--CCCCcEEEEEEecCCCccccccCCcccCCCCcccCCCC
Q psy4579 40 EWPSLTAQWLPDVTSVQLPNEDA-QFDASNYDTDKGTHTS--DEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNE 116 (368)
Q Consensus 40 ~~~~~~~~~~p~~~~l~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~ 116 (368)
..++.+.+|+||+++|++.+.++ .-.++.+++..|.... .... ......|.+++..+.... ...++..|.+|+.
T Consensus 203 ~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~~l~~~~g--~~~~~~~SpDG~~l~~~~-s~~g~~~Iy~~d~ 279 (433)
T PRK04922 203 AEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQRELVASFRG--INGAPSFSPDGRRLALTL-SRDGNPEIYVMDL 279 (433)
T ss_pred CCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEEEeccCCC--CccCceECCCCCEEEEEE-eCCCCceEEEEEC
Confidence 45788999999999999865432 2233555555443211 1111 122445655554433221 1122346888888
Q ss_pred CeeeeeccccCCCCceeeEecCCCCCeeEEEe-CCCc--EEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCC
Q psy4579 117 DAQFDASNYDTDKGGYGLSWNPSLNGYLLSAS-DDHT--ICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSL 193 (368)
Q Consensus 117 ~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~-~dg~--v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~ 193 (368)
.+.....+..+.......+|+|+| +.|+..+ .+|. |.++|+.++. ...+..+..... ..+|+|+
T Consensus 280 ~~g~~~~lt~~~~~~~~~~~spDG-~~l~f~sd~~g~~~iy~~dl~~g~--------~~~lt~~g~~~~---~~~~SpD- 346 (433)
T PRK04922 280 GSRQLTRLTNHFGIDTEPTWAPDG-KSIYFTSDRGGRPQIYRVAASGGS--------AERLTFQGNYNA---RASVSPD- 346 (433)
T ss_pred CCCCeEECccCCCCccceEECCCC-CEEEEEECCCCCceEEEEECCCCC--------eEEeecCCCCcc---CEEECCC-
Confidence 765555555666666789999999 7776655 4555 5555665542 122222222332 7899999
Q ss_pred CCeEEEeeCCC---cEEEEECCCC
Q psy4579 194 NGYLLSASDDH---TICLWDINAT 214 (368)
Q Consensus 194 ~~~l~s~s~dg---~i~iwd~~~~ 214 (368)
++.|+..+.++ .|.+||+.++
T Consensus 347 G~~Ia~~~~~~~~~~I~v~d~~~g 370 (433)
T PRK04922 347 GKKIAMVHGSGGQYRIAVMDLSTG 370 (433)
T ss_pred CCEEEEEECCCCceeEEEEECCCC
Confidence 77777654433 6999998775
|
|
| >PRK02889 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.88 E-value=1.2e-08 Score=93.82 Aligned_cols=161 Identities=12% Similarity=0.051 Sum_probs=93.2
Q ss_pred ccCceeeEecCCcccccCCCCc-cccccCcceeeeccccCCCCCcEEEEEEecCCCccccccCCcccCCCCcccCCC--C
Q psy4579 40 EWPSLTAQWLPDVTSVQLPNED-AQFDASNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPN--E 116 (368)
Q Consensus 40 ~~~~~~~~~~p~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~--~ 116 (368)
..++.+.+|+|||+.|++.+.+ +.-.++.+++..|....-....-.+....|.+++..+... .+.+|...+|. .
T Consensus 195 ~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~l~~~~g~~~~~~~SPDG~~la~~---~~~~g~~~Iy~~d~ 271 (427)
T PRK02889 195 PEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRVVANFKGSNSAPAWSPDGRTLAVA---LSRDGNSQIYTVNA 271 (427)
T ss_pred CCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEEeecCCCCccceEECCCCCEEEEE---EccCCCceEEEEEC
Confidence 4578889999999999886543 3333566776655432110000122345565555444322 13456666654 4
Q ss_pred CeeeeeccccCCCCceeeEecCCCCCeeEEEe-CCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCC
Q psy4579 117 DAQFDASNYDTDKGGYGLSWNPSLNGYLLSAS-DDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNG 195 (368)
Q Consensus 117 ~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~-~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~ 195 (368)
++.....+..+...+....|+|+| +.|+..+ .+|...||.+..... ....+..+.... ...+|+|+ ++
T Consensus 272 ~~~~~~~lt~~~~~~~~~~wSpDG-~~l~f~s~~~g~~~Iy~~~~~~g------~~~~lt~~g~~~---~~~~~SpD-G~ 340 (427)
T PRK02889 272 DGSGLRRLTQSSGIDTEPFFSPDG-RSIYFTSDRGGAPQIYRMPASGG------AAQRVTFTGSYN---TSPRISPD-GK 340 (427)
T ss_pred CCCCcEECCCCCCCCcCeEEcCCC-CEEEEEecCCCCcEEEEEECCCC------ceEEEecCCCCc---CceEECCC-CC
Confidence 444444445555566788999999 6666544 456777776643211 111222122222 26789998 88
Q ss_pred eEEEeeCCC---cEEEEECCCC
Q psy4579 196 YLLSASDDH---TICLWDINAT 214 (368)
Q Consensus 196 ~l~s~s~dg---~i~iwd~~~~ 214 (368)
+|+..+.++ .|.+||+.++
T Consensus 341 ~Ia~~s~~~g~~~I~v~d~~~g 362 (427)
T PRK02889 341 LLAYISRVGGAFKLYVQDLATG 362 (427)
T ss_pred EEEEEEccCCcEEEEEEECCCC
Confidence 887766554 6999999776
|
|
| >TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB | Back alignment and domain information |
|---|
Probab=98.86 E-value=1.3e-07 Score=87.26 Aligned_cols=93 Identities=16% Similarity=0.204 Sum_probs=64.4
Q ss_pred CcccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCC---CcEEEEeCCCCCCCCcccccceeeeccccceecce
Q psy4579 109 GNVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDD---HTICLWDINATPKENRVIDAKTIFTGHTAVVEVRY 185 (368)
Q Consensus 109 g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~d---g~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 185 (368)
..|.+++.++.....+..+...+...+|+|+| +.|+.++.+ ..|++||+.++.. ..+..+.+.+ .
T Consensus 170 ~~l~~~d~~g~~~~~l~~~~~~~~~p~~Spdg-~~la~~~~~~~~~~i~v~d~~~g~~--------~~~~~~~~~~---~ 237 (417)
T TIGR02800 170 YELQVADYDGANPQTITRSREPILSPAWSPDG-QKLAYVSFESGKPEIYVQDLATGQR--------EKVASFPGMN---G 237 (417)
T ss_pred ceEEEEcCCCCCCEEeecCCCceecccCCCCC-CEEEEEEcCCCCcEEEEEECCCCCE--------EEeecCCCCc---c
Confidence 35667777665555566677789999999999 888776643 4799999987632 2333344445 3
Q ss_pred eeEEeCCCCCeE-EEeeCCC--cEEEEECCCC
Q psy4579 186 GLSWNPSLNGYL-LSASDDH--TICLWDINAT 214 (368)
Q Consensus 186 ~i~~~p~~~~~l-~s~s~dg--~i~iwd~~~~ 214 (368)
+++|+|+ +..| ++.+.++ .|.+||+.++
T Consensus 238 ~~~~spD-g~~l~~~~~~~~~~~i~~~d~~~~ 268 (417)
T TIGR02800 238 APAFSPD-GSKLAVSLSKDGNPDIYVMDLDGK 268 (417)
T ss_pred ceEECCC-CCEEEEEECCCCCccEEEEECCCC
Confidence 8899999 6654 4555555 5888888765
|
The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear. |
| >KOG1334|consensus | Back alignment and domain information |
|---|
Probab=98.85 E-value=2.5e-08 Score=87.23 Aligned_cols=174 Identities=15% Similarity=0.144 Sum_probs=121.7
Q ss_pred eccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCC-CCeEEEe
Q psy4579 122 ASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSL-NGYLLSA 200 (368)
Q Consensus 122 ~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~-~~~l~s~ 200 (368)
..+-.|.+.|..|.|+..| ..|++|+.|..|.+||...... ...-..||...| +.-.|-|.. ..-++++
T Consensus 136 ~kL~~H~GcVntV~FN~~G-d~l~SgSDD~~vv~WdW~~~~~------~l~f~SGH~~Nv---fQaKFiP~s~d~ti~~~ 205 (559)
T KOG1334|consen 136 KKLNKHKGCVNTVHFNQRG-DVLASGSDDLQVVVWDWVSGSP------KLSFESGHCNNV---FQAKFIPFSGDRTIVTS 205 (559)
T ss_pred hcccCCCCccceeeecccC-ceeeccCccceEEeehhhccCc------ccccccccccch---hhhhccCCCCCcCceec
Confidence 3566799999999999999 9999999999999999987652 234456788777 477787753 3469999
Q ss_pred eCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEe---eecccccCCCCccceEEEEeecCCcccccccccccCC
Q psy4579 201 SDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIH---RLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTD 277 (368)
Q Consensus 201 s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~---~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~ 277 (368)
+.||.+++=.+...... .-...+..|..+|..++.. |..+.+++.|+.+.-+..+...+.
T Consensus 206 s~dgqvr~s~i~~t~~~----e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa------------- 268 (559)
T KOG1334|consen 206 SRDGQVRVSEILETGYV----ENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPA------------- 268 (559)
T ss_pred cccCceeeeeeccccce----ecceecccccCccceeeecCCCCCcccccccccceeeeeeccCCcc-------------
Confidence 99999998776443221 1123455688888888775 455666666554443332211110
Q ss_pred CCCcccccCCCCceeeeeecCccc---ceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCC
Q psy4579 278 KGDFGGFGSVSGKIEIEIKINHEG---EVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPS 335 (368)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~h~~---~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~ 335 (368)
.....+..+.. ....++.+|...+.+|+|+.|..+++||.+....
T Consensus 269 -------------~~~~cr~~~~~~~v~L~~Ia~~P~nt~~faVgG~dqf~RvYD~R~~~~ 316 (559)
T KOG1334|consen 269 -------------EKFVCREADEKERVGLYTIAVDPRNTNEFAVGGSDQFARVYDQRRIDK 316 (559)
T ss_pred -------------ceeeeeccCCccceeeeeEecCCCCccccccCChhhhhhhhcccchhh
Confidence 01112223333 5688999999989999999999999999987543
|
|
| >KOG4714|consensus | Back alignment and domain information |
|---|
Probab=98.84 E-value=1.3e-08 Score=82.27 Aligned_cols=96 Identities=18% Similarity=0.322 Sum_probs=74.9
Q ss_pred CcccCCCCCeeeee-ccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceee
Q psy4579 109 GNVQLPNEDAQFDA-SNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGL 187 (368)
Q Consensus 109 g~i~i~~~~~~~~~-~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i 187 (368)
+..+.|+.++.... ....-.+.|.+++-+|...+++++|+.||.+-+||.+.... +...++.|+.++ +-+
T Consensus 159 d~~~a~~~~p~~t~~~~~~~~~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~------p~S~l~ahk~~i---~eV 229 (319)
T KOG4714|consen 159 DNFYANTLDPIKTLIPSKKALDAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAM------PVSLLKAHKAEI---WEV 229 (319)
T ss_pred cceeeecccccccccccccccccchhhhCCcccccEEEEecCCCeEEEEEcccccc------hHHHHHHhhhhh---hhe
Confidence 44555665543211 11112344999999998767899999999999999998632 667889999999 499
Q ss_pred EEeCCCCCeEEEeeCCCcEEEEECCC
Q psy4579 188 SWNPSLNGYLLSASDDHTICLWDINA 213 (368)
Q Consensus 188 ~~~p~~~~~l~s~s~dg~i~iwd~~~ 213 (368)
-|+|.++..|.++++||.+--||..+
T Consensus 230 ~FHpk~p~~Lft~sedGslw~wdas~ 255 (319)
T KOG4714|consen 230 HFHPKNPEHLFTCSEDGSLWHWDAST 255 (319)
T ss_pred eccCCCchheeEecCCCcEEEEcCCC
Confidence 99999899999999999999999875
|
|
| >KOG1240|consensus | Back alignment and domain information |
|---|
Probab=98.83 E-value=1e-07 Score=92.29 Aligned_cols=190 Identities=15% Similarity=0.141 Sum_probs=110.2
Q ss_pred hheeecccccccCceeeEe-cCCcccccCCCCccccccCcceeeeccccCC--C----CCcEEEEEEecCCCccccccCC
Q psy4579 30 LYDLVMTHALEWPSLTAQW-LPDVTSVQLPNEDAQFDASNYDTDKGTHTSD--E----QNHLLIASVQLPNEDAQFDASN 102 (368)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~-~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~----~~~~~i~~~~~~~~~~~~~~~~ 102 (368)
+..++..|.. .+...+- .|++.++++||.||+|++|+.+...|..... + .....+..+.....+..+..+
T Consensus 1040 lVAhL~Ehs~--~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~~~Av~- 1116 (1431)
T KOG1240|consen 1040 LVAHLHEHSS--AVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGDQFAVS- 1116 (1431)
T ss_pred Eeehhhhccc--cccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCCeEEEE-
Confidence 4444444432 2333444 4556999999999999888766544431111 1 112233444443333333322
Q ss_pred cccCCCCcccCCCCCeee--------eeccccC-CC-CceeeEecCCCCC-eeEEEeCCCcEEEEeCCCCCCCCcccccc
Q psy4579 103 YDTDKGGNVQLPNEDAQF--------DASNYDT-DK-GGYGLSWNPSLNG-YLLSASDDHTICLWDINATPKENRVIDAK 171 (368)
Q Consensus 103 ~~~~~~g~i~i~~~~~~~--------~~~~~~h-~~-~v~~l~~sp~~~~-~lasg~~dg~v~iwd~~~~~~~~~~~~~~ 171 (368)
++||.|.+..++... ......+ .+ .|.+.+|...... .++-+..-+.|..||++....-. .
T Consensus 1117 ---t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w-----~ 1188 (1431)
T KOG1240|consen 1117 ---TKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAW-----R 1188 (1431)
T ss_pred ---cCCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHH-----h
Confidence 469999987765410 0111112 22 3444555544323 67777788999999998753210 1
Q ss_pred eeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeee-cccccEeEEEEee
Q psy4579 172 TIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFT-GHTAVVEDYSIHR 241 (368)
Q Consensus 172 ~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~v~~v~~~~ 241 (368)
.......+.|+ +++.+|. ++.+++|...|.+.+||+|-+. ++.... ++..+++.+..++
T Consensus 1189 lk~~~~hG~vT---Si~idp~-~~WlviGts~G~l~lWDLRF~~-------~i~sw~~P~~~~i~~v~~~~ 1248 (1431)
T KOG1240|consen 1189 LKNQLRHGLVT---SIVIDPW-CNWLVIGTSRGQLVLWDLRFRV-------PILSWEHPARAPIRHVWLCP 1248 (1431)
T ss_pred hhcCcccccee---EEEecCC-ceEEEEecCCceEEEEEeecCc-------eeecccCcccCCcceEEeec
Confidence 22333456776 9999998 8899999999999999999862 333332 2445666666654
|
|
| >KOG1064|consensus | Back alignment and domain information |
|---|
Probab=98.83 E-value=7.7e-09 Score=103.15 Aligned_cols=185 Identities=16% Similarity=0.243 Sum_probs=128.3
Q ss_pred ceeeEecCCcccccCCCCccccccCcceeeeccccCCCCCcEEEEEEecCCCccccccCCcccCCCCcccCCCCCeeeee
Q psy4579 43 SLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQFDA 122 (368)
Q Consensus 43 ~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~ 122 (368)
|+++.=+|-..+-++|+.||.+++|.|-.........--....+..+.+...+.++.... +||.+.+|....+...
T Consensus 2211 v~r~~sHp~~~~Yltgs~dgsv~~~~w~~~~~v~~~rt~g~s~vtr~~f~~qGnk~~i~d----~dg~l~l~q~~pk~~~ 2286 (2439)
T KOG1064|consen 2211 VRRMTSHPSDPYYLTGSQDGSVRMFEWGHGQQVVCFRTAGNSRVTRSRFNHQGNKFGIVD----GDGDLSLWQASPKPYT 2286 (2439)
T ss_pred eeeecCCCCCceEEecCCCceEEEEeccCCCeEEEeeccCcchhhhhhhcccCCceeeec----cCCceeecccCCccee
Confidence 445555677778899999999977766433211111111124466666666665555443 6899999999987777
Q ss_pred ccccCCCCceeeEecCCCCCeeEEEe---CCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEE
Q psy4579 123 SNYDTDKGGYGLSWNPSLNGYLLSAS---DDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLS 199 (368)
Q Consensus 123 ~~~~h~~~v~~l~~sp~~~~~lasg~---~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s 199 (368)
.-+.|+....+++|-. ..+++++ .++.+.+||....... .....+|.+.++ ++++.|. .++|+|
T Consensus 2287 s~qchnk~~~Df~Fi~---s~~~tag~s~d~~n~~lwDtl~~~~~------s~v~~~H~~gaT---~l~~~P~-~qllis 2353 (2439)
T KOG1064|consen 2287 SWQCHNKALSDFRFIG---SLLATAGRSSDNRNVCLWDTLLPPMN------SLVHTCHDGGAT---VLAYAPK-HQLLIS 2353 (2439)
T ss_pred ccccCCccccceeeee---hhhhccccCCCCCcccchhcccCccc------ceeeeecCCCce---EEEEcCc-ceEEEe
Confidence 7888999999999986 4577765 5789999998654321 233478999887 9999998 999999
Q ss_pred eeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeeecccccCCCCccceEEEE
Q psy4579 200 ASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIAS 259 (368)
Q Consensus 200 ~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~ 259 (368)
||.+|.|++||++..+ ..+.++. +. ....+.+++..+..++|-.+
T Consensus 2354 ggr~G~v~l~D~rqrq-------l~h~~~~-------~~-~~~~f~~~ss~g~ikIw~~s 2398 (2439)
T KOG1064|consen 2354 GGRKGEVCLFDIRQRQ-------LRHTFQA-------LD-TREYFVTGSSEGNIKIWRLS 2398 (2439)
T ss_pred cCCcCcEEEeehHHHH-------HHHHhhh-------hh-hhheeeccCcccceEEEEcc
Confidence 9999999999998862 2333332 12 24455666666667776543
|
|
| >KOG0280|consensus | Back alignment and domain information |
|---|
Probab=98.82 E-value=2.9e-08 Score=81.60 Aligned_cols=101 Identities=16% Similarity=0.148 Sum_probs=77.1
Q ss_pred CCCcccCCCC-Cee--eeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceec
Q psy4579 107 KGGNVQLPNE-DAQ--FDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEV 183 (368)
Q Consensus 107 ~~g~i~i~~~-~~~--~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~ 183 (368)
.+|.+.+-+. ... .......|+-+++..+|+...|+++.+|+.|+.+.-||++..+. -..+.-+-|+..|.
T Consensus 141 s~G~~~~v~~t~~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~-----~i~~n~kvH~~GV~- 214 (339)
T KOG0280|consen 141 SRGSISGVYETEMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKT-----FIWHNSKVHTSGVV- 214 (339)
T ss_pred CCCcEEEEecceeeeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCcc-----eeeecceeeecceE-
Confidence 3565653332 222 23366789999999999998889999999999999999994331 02233456888885
Q ss_pred ceeeEEeCCCCCeEEEeeCCCcEEEEECCCCC
Q psy4579 184 RYGLSWNPSLNGYLLSASDDHTICLWDINATP 215 (368)
Q Consensus 184 ~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~ 215 (368)
+|.=+|..+.+++||+.|..|++||.|+..
T Consensus 215 --SI~ss~~~~~~I~TGsYDe~i~~~DtRnm~ 244 (339)
T KOG0280|consen 215 --SIYSSPPKPTYIATGSYDECIRVLDTRNMG 244 (339)
T ss_pred --EEecCCCCCceEEEeccccceeeeehhccc
Confidence 888888778899999999999999999754
|
|
| >PRK01029 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.81 E-value=2.7e-07 Score=84.70 Aligned_cols=162 Identities=10% Similarity=0.044 Sum_probs=82.0
Q ss_pred ccCceeeEecCCccccc---CCCCccccccCcceeeeccccC--CCCCcEEEEEEecCCCccccccCC-cccCCCCcccC
Q psy4579 40 EWPSLTAQWLPDVTSVQ---LPNEDAQFDASNYDTDKGTHTS--DEQNHLLIASVQLPNEDAQFDASN-YDTDKGGNVQL 113 (368)
Q Consensus 40 ~~~~~~~~~~p~~~~l~---~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~g~i~i 113 (368)
.++..+-.|+|||+.++ +...++.-.++..++..|.... ..... .....|.+++..+.... -....+..+..
T Consensus 184 ~~~~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g~~~~lt~~~g~--~~~p~wSPDG~~Laf~s~~~g~~di~~~~ 261 (428)
T PRK01029 184 HSLSITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLENPAGKKILALQGN--QLMPTFSPRKKLLAFISDRYGNPDLFIQS 261 (428)
T ss_pred CCCcccceEccCCCceEEEEEEccCCCceEEEEECCCCCceEeecCCCC--ccceEECCCCCEEEEEECCCCCcceeEEE
Confidence 45677889999998643 3444444445666655443211 11111 11234544444433211 01111223334
Q ss_pred CCCCe---eeeecccc-CCCCceeeEecCCCCCeeEEEe-CCCcEEEEeCCC--CCCCCcccccceeeeccccceeccee
Q psy4579 114 PNEDA---QFDASNYD-TDKGGYGLSWNPSLNGYLLSAS-DDHTICLWDINA--TPKENRVIDAKTIFTGHTAVVEVRYG 186 (368)
Q Consensus 114 ~~~~~---~~~~~~~~-h~~~v~~l~~sp~~~~~lasg~-~dg~v~iwd~~~--~~~~~~~~~~~~~~~~h~~~v~~~~~ 186 (368)
|+... .....+.. +.......+|+|+| +.|+..+ .+|...+|.+.- ... ....+..+...+. .
T Consensus 262 ~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG-~~Laf~s~~~g~~~ly~~~~~~~g~------~~~~lt~~~~~~~---~ 331 (428)
T PRK01029 262 FSLETGAIGKPRRLLNEAFGTQGNPSFSPDG-TRLVFVSNKDGRPRIYIMQIDPEGQ------SPRLLTKKYRNSS---C 331 (428)
T ss_pred eecccCCCCcceEeecCCCCCcCCeEECCCC-CEEEEEECCCCCceEEEEECccccc------ceEEeccCCCCcc---c
Confidence 55432 11112222 22345678999999 7666554 577666665432 111 1233444444443 8
Q ss_pred eEEeCCCCCeEEEeeCC---CcEEEEECCCC
Q psy4579 187 LSWNPSLNGYLLSASDD---HTICLWDINAT 214 (368)
Q Consensus 187 i~~~p~~~~~l~s~s~d---g~i~iwd~~~~ 214 (368)
..|+|+ ++.|+..+.+ ..|.+||+.++
T Consensus 332 p~wSPD-G~~Laf~~~~~g~~~I~v~dl~~g 361 (428)
T PRK01029 332 PAWSPD-GKKIAFCSVIKGVRQICVYDLATG 361 (428)
T ss_pred eeECCC-CCEEEEEEcCCCCcEEEEEECCCC
Confidence 899999 7777665433 35777777654
|
|
| >KOG0974|consensus | Back alignment and domain information |
|---|
Probab=98.79 E-value=3.1e-08 Score=94.16 Aligned_cols=129 Identities=19% Similarity=0.279 Sum_probs=98.9
Q ss_pred CCCcccCCCCCeee-eeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecce
Q psy4579 107 KGGNVQLPNEDAQF-DASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRY 185 (368)
Q Consensus 107 ~~g~i~i~~~~~~~-~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 185 (368)
--|.|.+|...... ...+.+|.+.|.++.|+-+| .++++.|.|.++|+|++++.+. .....-+|+..+ +
T Consensus 153 v~~~iivW~~~~dn~p~~l~GHeG~iF~i~~s~dg-~~i~s~SdDRsiRlW~i~s~~~------~~~~~fgHsaRv---w 222 (967)
T KOG0974|consen 153 VFGEIIVWKPHEDNKPIRLKGHEGSIFSIVTSLDG-RYIASVSDDRSIRLWPIDSREV------LGCTGFGHSARV---W 222 (967)
T ss_pred ccccEEEEeccccCCcceecccCCceEEEEEccCC-cEEEEEecCcceeeeecccccc------cCccccccccee---E
Confidence 35778889875322 23578999999999999999 9999999999999999998753 224566899998 6
Q ss_pred eeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeeccc-ccEeEEEEee--ecccccCCCCccceE
Q psy4579 186 GLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHT-AVVEDYSIHR--LILGTHTSDEQNHLL 256 (368)
Q Consensus 186 ~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~-~~v~~v~~~~--~~~~~~~~d~~~~~~ 256 (368)
.++|.|. .++|++.|.+.++|+.+... +..+.+|. ..+..++... ....++..|+..++|
T Consensus 223 ~~~~~~n---~i~t~gedctcrvW~~~~~~--------l~~y~~h~g~~iw~~~~~~~~~~~vT~g~Ds~lk~~ 285 (967)
T KOG0974|consen 223 ACCFLPN---RIITVGEDCTCRVWGVNGTQ--------LEVYDEHSGKGIWKIAVPIGVIIKVTGGNDSTLKLW 285 (967)
T ss_pred EEEeccc---eeEEeccceEEEEEecccce--------ehhhhhhhhcceeEEEEcCCceEEEeeccCcchhhh
Confidence 9999974 89999999999999765542 23555553 4566666653 556677777777766
|
|
| >PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide | Back alignment and domain information |
|---|
Probab=98.75 E-value=3.7e-08 Score=57.34 Aligned_cols=36 Identities=17% Similarity=0.397 Sum_probs=32.0
Q ss_pred eeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEE
Q psy4579 292 EIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFD 329 (368)
Q Consensus 292 ~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd 329 (368)
...+. +|.+.|++++|+|++ .+|+||+.|++|++||
T Consensus 4 ~~~~~-~h~~~i~~i~~~~~~-~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 4 VRTFR-GHSSSINSIAWSPDG-NFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEE-SSSSSEEEEEEETTS-SEEEEEETTSEEEEEE
T ss_pred EEEEc-CCCCcEEEEEEeccc-ccceeeCCCCEEEEEC
Confidence 34454 899999999999998 7888999999999997
|
WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g .... |
| >TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB | Back alignment and domain information |
|---|
Probab=98.75 E-value=3.9e-07 Score=84.01 Aligned_cols=113 Identities=15% Similarity=0.186 Sum_probs=67.0
Q ss_pred EEecCCCccccccCCcccCCCCcccCCCCCeeeeeccccCCCCceeeEecCCCCCee-EEEeCCC--cEEEEeCCCCCCC
Q psy4579 88 SVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYL-LSASDDH--TICLWDINATPKE 164 (368)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l-asg~~dg--~v~iwd~~~~~~~ 164 (368)
...|.+++..+....+. .+...|.+|+..+........+...+.+++|+|+| +.| ++.+.++ .|.+||+.++.
T Consensus 194 ~p~~Spdg~~la~~~~~-~~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~spDg-~~l~~~~~~~~~~~i~~~d~~~~~-- 269 (417)
T TIGR02800 194 SPAWSPDGQKLAYVSFE-SGKPEIYVQDLATGQREKVASFPGMNGAPAFSPDG-SKLAVSLSKDGNPDIYVMDLDGKQ-- 269 (417)
T ss_pred cccCCCCCCEEEEEEcC-CCCcEEEEEECCCCCEEEeecCCCCccceEECCCC-CEEEEEECCCCCccEEEEECCCCC--
Confidence 34454444443322222 12356888887654333444566677889999999 555 4555555 58888887653
Q ss_pred CcccccceeeeccccceecceeeEEeCCCCCeEEEeeC-CC--cEEEEECCCC
Q psy4579 165 NRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASD-DH--TICLWDINAT 214 (368)
Q Consensus 165 ~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~-dg--~i~iwd~~~~ 214 (368)
...+..+..... ...|+|+ +..|+..+. ++ .|.++|+.++
T Consensus 270 ------~~~l~~~~~~~~---~~~~s~d-g~~l~~~s~~~g~~~iy~~d~~~~ 312 (417)
T TIGR02800 270 ------LTRLTNGPGIDT---EPSWSPD-GKSIAFTSDRGGSPQIYMMDADGG 312 (417)
T ss_pred ------EEECCCCCCCCC---CEEECCC-CCEEEEEECCCCCceEEEEECCCC
Confidence 233334444332 7789998 776665543 44 4667777654
|
The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear. |
| >PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide | Back alignment and domain information |
|---|
Probab=98.75 E-value=2.6e-08 Score=58.01 Aligned_cols=38 Identities=26% Similarity=0.473 Sum_probs=35.0
Q ss_pred eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEe
Q psy4579 119 QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWD 157 (368)
Q Consensus 119 ~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd 157 (368)
+....+.+|.+.|++|+|+|++ .+|++|+.|+.|++||
T Consensus 2 ~~~~~~~~h~~~i~~i~~~~~~-~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 2 KCVRTFRGHSSSINSIAWSPDG-NFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEESSSSSEEEEEEETTS-SEEEEEETTSEEEEEE
T ss_pred eEEEEEcCCCCcEEEEEEeccc-ccceeeCCCCEEEEEC
Confidence 4567788999999999999998 9999999999999997
|
WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g .... |
| >KOG1064|consensus | Back alignment and domain information |
|---|
Probab=98.74 E-value=1e-07 Score=95.54 Aligned_cols=159 Identities=16% Similarity=0.300 Sum_probs=114.1
Q ss_pred CCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeee--ccccceecceeeEEeCCCCCeEEEeeCCC
Q psy4579 127 TDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFT--GHTAVVEVRYGLSWNPSLNGYLLSASDDH 204 (368)
Q Consensus 127 h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~--~h~~~v~~~~~i~~~p~~~~~l~s~s~dg 204 (368)
+-..|.++.=+|.. .+.+||+.||.|++|.-..+.. +..++ |. ..|+ .+.|+.+ ++.+..+..||
T Consensus 2207 ~v~~v~r~~sHp~~-~~Yltgs~dgsv~~~~w~~~~~-------v~~~rt~g~-s~vt---r~~f~~q-Gnk~~i~d~dg 2273 (2439)
T KOG1064|consen 2207 PVENVRRMTSHPSD-PYYLTGSQDGSVRMFEWGHGQQ-------VVCFRTAGN-SRVT---RSRFNHQ-GNKFGIVDGDG 2273 (2439)
T ss_pred ccCceeeecCCCCC-ceEEecCCCceEEEEeccCCCe-------EEEeeccCc-chhh---hhhhccc-CCceeeeccCC
Confidence 44567888888887 7889999999999998776542 22332 33 6665 8899988 88999999999
Q ss_pred cEEEEECCCCCCCCccccceeeeecccccEeEEEEeeecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccc
Q psy4579 205 TICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGF 284 (368)
Q Consensus 205 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 284 (368)
.+.+|.... .+....+.|.....++.|-..++++.+. ....+.+.+|
T Consensus 2274 ~l~l~q~~p--------k~~~s~qchnk~~~Df~Fi~s~~~tag~-------------------------s~d~~n~~lw 2320 (2439)
T KOG1064|consen 2274 DLSLWQASP--------KPYTSWQCHNKALSDFRFIGSLLATAGR-------------------------SSDNRNVCLW 2320 (2439)
T ss_pred ceeecccCC--------cceeccccCCccccceeeeehhhhcccc-------------------------CCCCCcccch
Confidence 999998873 3456677788888777775433333321 1122234444
Q ss_pred cCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCC
Q psy4579 285 GSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 285 ~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
|..-......+..+|.+.++++++-|.. .+|.|||.+|.|++||++.
T Consensus 2321 Dtl~~~~~s~v~~~H~~gaT~l~~~P~~-qllisggr~G~v~l~D~rq 2367 (2439)
T KOG1064|consen 2321 DTLLPPMNSLVHTCHDGGATVLAYAPKH-QLLISGGRKGEVCLFDIRQ 2367 (2439)
T ss_pred hcccCcccceeeeecCCCceEEEEcCcc-eEEEecCCcCcEEEeehHH
Confidence 4333322222225899999999999999 6888999999999999986
|
|
| >KOG4547|consensus | Back alignment and domain information |
|---|
Probab=98.71 E-value=5.1e-07 Score=81.06 Aligned_cols=115 Identities=22% Similarity=0.237 Sum_probs=95.3
Q ss_pred CCCCcccCCCCCee-eeec--cccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeecccccee
Q psy4579 106 DKGGNVQLPNEDAQ-FDAS--NYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVE 182 (368)
Q Consensus 106 ~~~g~i~i~~~~~~-~~~~--~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~ 182 (368)
.+.|.|.+++..+. .... ...|.+.|.++.++.+- ..|-+++.|+.+..|+..... .++.+++....+.
T Consensus 77 t~~g~v~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~-~ciyS~~ad~~v~~~~~~~~~-------~~~~~~~~~~~~~ 148 (541)
T KOG4547|consen 77 TPQGSVLLYSVAGGEITAKLSTDKHYGNVNEILDAQRL-GCIYSVGADLKVVYILEKEKV-------IIRIWKEQKPLVS 148 (541)
T ss_pred cCCccEEEEEecCCeEEEEEecCCCCCcceeeeccccc-CceEecCCceeEEEEecccce-------eeeeeccCCCccc
Confidence 35688888887643 3333 34699999999999887 899999999999999998764 5677888777775
Q ss_pred cceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee
Q psy4579 183 VRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR 241 (368)
Q Consensus 183 ~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~ 241 (368)
+++.+|+ +..++++| ++|++||++++ +.+..|.||..+|++++|-.
T Consensus 149 ---sl~is~D-~~~l~~as--~~ik~~~~~~k-------evv~~ftgh~s~v~t~~f~~ 194 (541)
T KOG4547|consen 149 ---SLCISPD-GKILLTAS--RQIKVLDIETK-------EVVITFTGHGSPVRTLSFTT 194 (541)
T ss_pred ---eEEEcCC-CCEEEecc--ceEEEEEccCc-------eEEEEecCCCcceEEEEEEE
Confidence 9999999 88888875 57999999998 56889999999999999964
|
|
| >KOG1354|consensus | Back alignment and domain information |
|---|
Probab=98.69 E-value=2.3e-07 Score=77.97 Aligned_cols=240 Identities=15% Similarity=0.199 Sum_probs=124.6
Q ss_pred ceeeEecCCcccccCCCCccccccCcceeeeccccCCCCCcEEEEEEecCCCccccccCCcccCCCCcccCCCCCeeeee
Q psy4579 43 SLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQFDA 122 (368)
Q Consensus 43 ~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~ 122 (368)
+.++.|.-+|.+|++|..+|.|.++.-. ..... .+... -.+.++...++...
T Consensus 28 is~vef~~~Ge~LatGdkgGRVv~f~r~-----~~~~~-ey~~~--t~fqshepEFDYLk-------------------- 79 (433)
T KOG1354|consen 28 ISAVEFDHYGERLATGDKGGRVVLFERE-----KLYKG-EYNFQ--TEFQSHEPEFDYLK-------------------- 79 (433)
T ss_pred eeeEEeecccceEeecCCCCeEEEeecc-----ccccc-ceeee--eeeeccCcccchhh--------------------
Confidence 5678899999999999999887443211 11110 11111 11222222222111
Q ss_pred ccccCCCCceeeEecCCCC-CeeEEEeCCCcEEEEeCCCCCCCCcc----------------------------ccccee
Q psy4579 123 SNYDTDKGGYGLSWNPSLN-GYLLSASDDHTICLWDINATPKENRV----------------------------IDAKTI 173 (368)
Q Consensus 123 ~~~~h~~~v~~l~~sp~~~-~~lasg~~dg~v~iwd~~~~~~~~~~----------------------------~~~~~~ 173 (368)
...-..+|+.++|.++++ ..++....|.+|++|.+......... ..|.+.
T Consensus 80 -SleieEKinkIrw~~~~n~a~FLlstNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv 158 (433)
T KOG1354|consen 80 -SLEIEEKINKIRWLDDGNLAEFLLSTNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRV 158 (433)
T ss_pred -hhhhhhhhhhceecCCCCccEEEEecCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeee
Confidence 112345788899997652 35666778999999998754322100 001122
Q ss_pred e-eccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccce-eeeecccccEeEEEEee---ecccccC
Q psy4579 174 F-TGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAK-TIFTGHTAVVEDYSIHR---LILGTHT 248 (368)
Q Consensus 174 ~-~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~v~~v~~~~---~~~~~~~ 248 (368)
+ .+|+--+. +|+++.| ...++|+ .|=.|.+|++.-....-++.+.. ..+..-+.-|++..||| ..++-.+
T Consensus 159 ~aNaHtyhiN---SIS~NsD-~Et~lSA-DdLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSS 233 (433)
T KOG1354|consen 159 YANAHTYHIN---SISVNSD-KETFLSA-DDLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSS 233 (433)
T ss_pred ccccceeEee---eeeecCc-cceEeec-cceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEec
Confidence 2 24666675 9999988 7777774 68899999987654322211100 11112234567777876 2333334
Q ss_pred CCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCC-CeEEE
Q psy4579 249 SDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPS-SDVLV 327 (368)
Q Consensus 249 ~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~D-g~i~i 327 (368)
+.+.+++...+.. ..+|..+. ++..........+...--..|..+.|+++| ++++| .| -+|++
T Consensus 234 SKGtIrLcDmR~~----------aLCd~hsK---lfEepedp~~rsffseiIsSISDvKFs~sG-ryils--RDyltvk~ 297 (433)
T KOG1354|consen 234 SKGTIRLCDMRQS----------ALCDAHSK---LFEEPEDPSSRSFFSEIISSISDVKFSHSG-RYILS--RDYLTVKL 297 (433)
T ss_pred CCCcEEEeechhh----------hhhcchhh---hhccccCCcchhhHHHHhhhhhceEEccCC-cEEEE--eccceeEE
Confidence 4344444332210 00110000 000000000000111223468899999999 56655 44 78999
Q ss_pred EECCC
Q psy4579 328 FDYTK 332 (368)
Q Consensus 328 wd~~~ 332 (368)
||+..
T Consensus 298 wD~nm 302 (433)
T KOG1354|consen 298 WDLNM 302 (433)
T ss_pred Eeccc
Confidence 99975
|
|
| >KOG4547|consensus | Back alignment and domain information |
|---|
Probab=98.67 E-value=6.7e-07 Score=80.32 Aligned_cols=179 Identities=12% Similarity=0.137 Sum_probs=128.4
Q ss_pred CCCCcccCCCCCeeeeecc----ccCCCCceeeEec------C-------------CCCCeeEEEeCCCcEEEEeCCCCC
Q psy4579 106 DKGGNVQLPNEDAQFDASN----YDTDKGGYGLSWN------P-------------SLNGYLLSASDDHTICLWDINATP 162 (368)
Q Consensus 106 ~~~g~i~i~~~~~~~~~~~----~~h~~~v~~l~~s------p-------------~~~~~lasg~~dg~v~iwd~~~~~ 162 (368)
..||.+++|+......... ..-.+...+..|. | .+...++-|...|.|.+|++..++
T Consensus 12 ~~~g~l~iw~t~~~~~~~e~~p~~~~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlgt~~g~v~~ys~~~g~ 91 (541)
T KOG4547|consen 12 TGDGRLRIWDTAKNQLQQEFAPIASLSGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLGTPQGSVLLYSVAGGE 91 (541)
T ss_pred CCCCeEEEEEccCceeeeeeccchhccCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEeecCCccEEEEEecCCe
Confidence 4689999999764333222 2234455555552 1 112478888899999999998875
Q ss_pred CCCcccccceee--eccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEe
Q psy4579 163 KENRVIDAKTIF--TGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIH 240 (368)
Q Consensus 163 ~~~~~~~~~~~~--~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~ 240 (368)
. ...+ .+|.+.|. ++.++.+ ...|.|++.|+.+..|+.... ..++.+......+.+++..
T Consensus 92 i-------t~~~st~~h~~~v~---~~~~~~~-~~ciyS~~ad~~v~~~~~~~~-------~~~~~~~~~~~~~~sl~is 153 (541)
T KOG4547|consen 92 I-------TAKLSTDKHYGNVN---EILDAQR-LGCIYSVGADLKVVYILEKEK-------VIIRIWKEQKPLVSSLCIS 153 (541)
T ss_pred E-------EEEEecCCCCCcce---eeecccc-cCceEecCCceeEEEEecccc-------eeeeeeccCCCccceEEEc
Confidence 2 2333 46888886 8888877 889999999999999998876 3456666666666666665
Q ss_pred ee--cccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCC-----CC
Q psy4579 241 RL--ILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQ-----NP 313 (368)
Q Consensus 241 ~~--~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~-----~~ 313 (368)
|. +++++ .+.+..+++.++++..++. +|.++|++++|--. |.
T Consensus 154 ~D~~~l~~a------------------------------s~~ik~~~~~~kevv~~ft-gh~s~v~t~~f~~~~~g~~G~ 202 (541)
T KOG4547|consen 154 PDGKILLTA------------------------------SRQIKVLDIETKEVVITFT-GHGSPVRTLSFTTLIDGIIGK 202 (541)
T ss_pred CCCCEEEec------------------------------cceEEEEEccCceEEEEec-CCCcceEEEEEEEeccccccc
Confidence 42 11111 1235667777888888887 99999999999887 77
Q ss_pred cEEEEecCCCeEEEEECCCC
Q psy4579 314 CVIATKTPSSDVLVFDYTKH 333 (368)
Q Consensus 314 ~~lasgs~Dg~i~iwd~~~~ 333 (368)
++|.+...+..|.+|-+...
T Consensus 203 ~vLssa~~~r~i~~w~v~~~ 222 (541)
T KOG4547|consen 203 YVLSSAAAERGITVWVVEKE 222 (541)
T ss_pred eeeeccccccceeEEEEEcc
Confidence 88988888889999998763
|
|
| >KOG3914|consensus | Back alignment and domain information |
|---|
Probab=98.63 E-value=1.5e-07 Score=80.57 Aligned_cols=97 Identities=23% Similarity=0.240 Sum_probs=77.4
Q ss_pred CCcccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceee
Q psy4579 108 GGNVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGL 187 (368)
Q Consensus 108 ~g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i 187 (368)
...+.+|+.+........+|-..++.++|+||+ +.++++..|..||+=....... ...-.-||+.-|. .+
T Consensus 131 ~~~~di~s~~~~~~~~~lGhvSml~dVavS~D~-~~IitaDRDEkIRvs~ypa~f~------IesfclGH~eFVS---~i 200 (390)
T KOG3914|consen 131 VYSFDILSADSGRCEPILGHVSMLLDVAVSPDD-QFIITADRDEKIRVSRYPATFV------IESFCLGHKEFVS---TI 200 (390)
T ss_pred ceeeeeecccccCcchhhhhhhhhheeeecCCC-CEEEEecCCceEEEEecCcccc------hhhhccccHhhee---ee
Confidence 455667776655666778999999999999998 9999999999999976654321 2234568999996 88
Q ss_pred EEeCCCCCeEEEeeCCCcEEEEECCCCCC
Q psy4579 188 SWNPSLNGYLLSASDDHTICLWDINATPK 216 (368)
Q Consensus 188 ~~~p~~~~~l~s~s~dg~i~iwd~~~~~~ 216 (368)
+.-+ +..|+|||.|+++++||++++..
T Consensus 201 sl~~--~~~LlS~sGD~tlr~Wd~~sgk~ 227 (390)
T KOG3914|consen 201 SLTD--NYLLLSGSGDKTLRLWDITSGKL 227 (390)
T ss_pred eecc--CceeeecCCCCcEEEEecccCCc
Confidence 8776 56799999999999999999854
|
|
| >KOG0309|consensus | Back alignment and domain information |
|---|
Probab=98.63 E-value=1.3e-07 Score=87.04 Aligned_cols=175 Identities=17% Similarity=0.272 Sum_probs=113.8
Q ss_pred cCcchheeecccccccCceeeEecCCccc---ccCCCCccccccCcceeeeccccCC---CCCcEEEEEEecCCCccccc
Q psy4579 26 NTPFLYDLVMTHALEWPSLTAQWLPDVTS---VQLPNEDAQFDASNYDTDKGTHTSD---EQNHLLIASVQLPNEDAQFD 99 (368)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~---l~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~i~~~~~~~~~~~~~ 99 (368)
..|+---...-|-.+|.+-.+||+|.... ++.-+.... ++|+...... ...+ ......|..+.|......+.
T Consensus 53 d~p~~ppr~l~h~tpw~vad~qws~h~a~~~wiVsts~qka-iiwnlA~ss~-~aIef~lhghsraitd~n~~~q~pdVl 130 (1081)
T KOG0309|consen 53 DDPFTPPRWLHHITPWQVADVQWSPHPAKPYWIVSTSNQKA-IIWNLAKSSS-NAIEFVLHGHSRAITDINFNPQHPDVL 130 (1081)
T ss_pred cCCCCCceeeeccCcchhcceecccCCCCceeEEecCcchh-hhhhhhcCCc-cceEEEEecCccceeccccCCCCCcce
Confidence 33443333445778999999999987553 222222222 3355433321 1111 22234467777754444444
Q ss_pred cCCcccCCCCcccCCCCCe--eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeecc
Q psy4579 100 ASNYDTDKGGNVQLPNEDA--QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGH 177 (368)
Q Consensus 100 ~~~~~~~~~g~i~i~~~~~--~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h 177 (368)
+.- +.|-.+..|+... ...........+-..++|+-..+..+|+ +....|++||.+.+.. +...+++|
T Consensus 131 atc---svdt~vh~wd~rSp~~p~ys~~~w~s~asqVkwnyk~p~vlas-shg~~i~vwd~r~gs~------pl~s~K~~ 200 (1081)
T KOG0309|consen 131 ATC---SVDTYVHAWDMRSPHRPFYSTSSWRSAASQVKWNYKDPNVLAS-SHGNDIFVWDLRKGST------PLCSLKGH 200 (1081)
T ss_pred eec---cccccceeeeccCCCcceeeeecccccCceeeecccCcchhhh-ccCCceEEEeccCCCc------ceEEeccc
Confidence 332 3477889998764 2233444455566779999887566655 5567899999998764 77889999
Q ss_pred ccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCC
Q psy4579 178 TAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATP 215 (368)
Q Consensus 178 ~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~ 215 (368)
...+. .++|+.-....+.+++.||+|+.||.....
T Consensus 201 vs~vn---~~~fnr~~~s~~~s~~~d~tvkfw~y~kSt 235 (1081)
T KOG0309|consen 201 VSSVN---SIDFNRFKYSEIMSSSNDGTVKFWDYSKST 235 (1081)
T ss_pred ceeee---hHHHhhhhhhhhcccCCCCceeeecccccc
Confidence 88885 999987656779999999999999987654
|
|
| >KOG2315|consensus | Back alignment and domain information |
|---|
Probab=98.61 E-value=7.5e-07 Score=79.58 Aligned_cols=279 Identities=14% Similarity=0.122 Sum_probs=149.9
Q ss_pred hhhhhhhhhcCcchheeecccc-cccCceeeEecCCcccccCCCCccccccCcceeeeccccCC-CCCcEEEEEEecCCC
Q psy4579 17 NEEYKIWKKNTPFLYDLVMTHA-LEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSD-EQNHLLIASVQLPNE 94 (368)
Q Consensus 17 ~~~~~~w~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~ 94 (368)
....++|+..+...-.++.... -.| +.+|++|-...+--.. +.+ .-|+... ..... .-....|....+++.
T Consensus 104 ~pn~~v~~vet~~~~s~~q~k~Q~~W---~~qfs~dEsl~arlv~-nev--~f~~~~~-f~~~~~kl~~~~i~~f~lSpg 176 (566)
T KOG2315|consen 104 NPNVLVYNVETGVQRSQIQKKMQNGW---VPQFSIDESLAARLVS-NEV--QFYDLGS-FKTIQHKLSVSGITMLSLSPG 176 (566)
T ss_pred CCceeeeeeccceehhheehhhhcCc---ccccccchhhhhhhhc-ceE--EEEecCC-ccceeeeeeccceeeEEecCC
Confidence 4556677777744433333322 236 6789998776443211 112 1122221 11111 001122455555544
Q ss_pred ccccccCCcccCCC---CcccCCCCCeeeeecccc----CCCCceeeEecCCCCCeeEEEeC--CC---------cEEEE
Q psy4579 95 DAQFDASNYDTDKG---GNVQLPNEDAQFDASNYD----TDKGGYGLSWNPSLNGYLLSASD--DH---------TICLW 156 (368)
Q Consensus 95 ~~~~~~~~~~~~~~---g~i~i~~~~~~~~~~~~~----h~~~v~~l~~sp~~~~~lasg~~--dg---------~v~iw 156 (368)
......+.|....+ +.++||............ ....=..+.|++-|..+|+.++. |. ++.+.
T Consensus 177 p~~~~vAvyvPe~kGaPa~vri~~~~~~~~~~~~a~ksFFkadkvqm~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll 256 (566)
T KOG2315|consen 177 PEPPFVAVYVPEKKGAPASVRIYKYPEEGQHQPVANKSFFKADKVQMKWNKLGTALLVLASTDVDKTNASYYGEQTLYLL 256 (566)
T ss_pred CCCceEEEEccCCCCCCcEEEEeccccccccchhhhccccccceeEEEeccCCceEEEEEEEeecCCCccccccceEEEE
Confidence 33344444554444 468888765211111111 12222347899888555555543 33 46666
Q ss_pred eCCCCCCCCcccccceeeec-cccceecceeeEEeCCCCCeEEE--eeCCCcEEEEECCCCCCCCccccceeeeeccccc
Q psy4579 157 DINATPKENRVIDAKTIFTG-HTAVVEVRYGLSWNPSLNGYLLS--ASDDHTICLWDINATPKENRVIDAKTIFTGHTAV 233 (368)
Q Consensus 157 d~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~i~~~p~~~~~l~s--~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 233 (368)
+++.. ...+.. ..++| +++.|+|+ +.-|+. |-.=-++.|+|++.. ++..+ -+++
T Consensus 257 ~t~g~---------s~~V~L~k~GPV---hdv~W~~s-~~EF~VvyGfMPAkvtifnlr~~--------~v~df--~egp 313 (566)
T KOG2315|consen 257 ATQGE---------SVSVPLLKEGPV---HDVTWSPS-GREFAVVYGFMPAKVTIFNLRGK--------PVFDF--PEGP 313 (566)
T ss_pred EecCc---------eEEEecCCCCCc---eEEEECCC-CCEEEEEEecccceEEEEcCCCC--------EeEeC--CCCC
Confidence 66522 122332 47888 49999998 554433 345568999999874 23333 3455
Q ss_pred EeEEEEeeecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCC
Q psy4579 234 VEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNP 313 (368)
Q Consensus 234 v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~ 313 (368)
-+++-|+|. +..+.+.+|+.-.|.+-+||..+.+++..+. -..-+-+.|+|+|+
T Consensus 314 RN~~~fnp~-----------------------g~ii~lAGFGNL~G~mEvwDv~n~K~i~~~~---a~~tt~~eW~PdGe 367 (566)
T KOG2315|consen 314 RNTAFFNPH-----------------------GNIILLAGFGNLPGDMEVWDVPNRKLIAKFK---AANTTVFEWSPDGE 367 (566)
T ss_pred ccceEECCC-----------------------CCEEEEeecCCCCCceEEEeccchhhccccc---cCCceEEEEcCCCc
Confidence 666777752 2222334455566777778877766555543 23345689999996
Q ss_pred cEEEEecC------CCeEEEEECCCCCCCCCCCCCCCCceeeecccC-ceeeecceeee
Q psy4579 314 CVIATKTP------SSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQK-EGLIEGTYNCY 365 (368)
Q Consensus 314 ~~lasgs~------Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~-~V~~l~w~p~~ 365 (368)
+++ |++. |..++||++.. .++. .-+-. +.+.++|-|+.
T Consensus 368 ~fl-TATTaPRlrvdNg~KiwhytG-----------~~l~--~~~f~sEL~qv~W~P~~ 412 (566)
T KOG2315|consen 368 YFL-TATTAPRLRVDNGIKIWHYTG-----------SLLH--EKMFKSELLQVEWRPFN 412 (566)
T ss_pred EEE-EEeccccEEecCCeEEEEecC-----------ceee--hhhhhHhHhheeeeecC
Confidence 555 5543 78899999973 2211 12222 57788888764
|
|
| >PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A | Back alignment and domain information |
|---|
Probab=98.58 E-value=2.7e-06 Score=76.28 Aligned_cols=181 Identities=15% Similarity=0.166 Sum_probs=99.7
Q ss_pred CCCcccCCCCCeeeeeccccCCCCc-eeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecce
Q psy4579 107 KGGNVQLPNEDAQFDASNYDTDKGG-YGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRY 185 (368)
Q Consensus 107 ~~g~i~i~~~~~~~~~~~~~h~~~v-~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 185 (368)
++|.|.+.|.........+.....+ ..+.|+|+| +++.+++.||.|.++|+.+.+ .+..++.-..+.
T Consensus 14 ~~~~v~viD~~t~~~~~~i~~~~~~h~~~~~s~Dg-r~~yv~~rdg~vsviD~~~~~-------~v~~i~~G~~~~---- 81 (369)
T PF02239_consen 14 GSGSVAVIDGATNKVVARIPTGGAPHAGLKFSPDG-RYLYVANRDGTVSVIDLATGK-------VVATIKVGGNPR---- 81 (369)
T ss_dssp GGTEEEEEETTT-SEEEEEE-STTEEEEEE-TT-S-SEEEEEETTSEEEEEETTSSS-------EEEEEE-SSEEE----
T ss_pred CCCEEEEEECCCCeEEEEEcCCCCceeEEEecCCC-CEEEEEcCCCeEEEEECCccc-------EEEEEecCCCcc----
Confidence 4678888887764444444333333 447899999 888888999999999999875 456666555554
Q ss_pred eeEEeCCCCCeEEEe-eCCCcEEEEECCCCCCCCccccceeeeecc-------cccEeEEEEeeecccccCCCCccceEE
Q psy4579 186 GLSWNPSLNGYLLSA-SDDHTICLWDINATPKENRVIDAKTIFTGH-------TAVVEDYSIHRLILGTHTSDEQNHLLI 257 (368)
Q Consensus 186 ~i~~~p~~~~~l~s~-s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~-------~~~v~~v~~~~~~~~~~~~d~~~~~~~ 257 (368)
+++++++ +.+++++ ..++.+.++|.++. ++++.+... ...+..+...+. ...|+
T Consensus 82 ~i~~s~D-G~~~~v~n~~~~~v~v~D~~tl-------e~v~~I~~~~~~~~~~~~Rv~aIv~s~~----------~~~fV 143 (369)
T PF02239_consen 82 GIAVSPD-GKYVYVANYEPGTVSVIDAETL-------EPVKTIPTGGMPVDGPESRVAAIVASPG----------RPEFV 143 (369)
T ss_dssp EEEE--T-TTEEEEEEEETTEEEEEETTT---------EEEEEE--EE-TTTS---EEEEEE-SS----------SSEEE
T ss_pred eEEEcCC-CCEEEEEecCCCceeEeccccc-------cceeecccccccccccCCCceeEEecCC----------CCEEE
Confidence 8999999 7777665 57899999999886 334444321 112223322210 01111
Q ss_pred EEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCC
Q psy4579 258 ASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 258 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
..+ . +.+.+...|....+........-........|+|++.+++++...+..|.++|...
T Consensus 144 v~l-------------k--d~~~I~vVdy~d~~~~~~~~i~~g~~~~D~~~dpdgry~~va~~~sn~i~viD~~~ 203 (369)
T PF02239_consen 144 VNL-------------K--DTGEIWVVDYSDPKNLKVTTIKVGRFPHDGGFDPDGRYFLVAANGSNKIAVIDTKT 203 (369)
T ss_dssp EEE-------------T--TTTEEEEEETTTSSCEEEEEEE--TTEEEEEE-TTSSEEEEEEGGGTEEEEEETTT
T ss_pred EEE-------------c--cCCeEEEEEeccccccceeeecccccccccccCcccceeeecccccceeEEEeecc
Confidence 111 1 11112222222221111111122334567899999977777777788999999875
|
... |
| >KOG2321|consensus | Back alignment and domain information |
|---|
Probab=98.58 E-value=2.6e-06 Score=76.45 Aligned_cols=195 Identities=12% Similarity=0.132 Sum_probs=119.0
Q ss_pred ccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCc---------------------ccccceeeeccc---
Q psy4579 123 SNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENR---------------------VIDAKTIFTGHT--- 178 (368)
Q Consensus 123 ~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~---------------------~~~~~~~~~~h~--- 178 (368)
.-+.|....+.|..+|+|...+|||-.-..|++||+.+...... .+..-+.+.-|.
T Consensus 46 Qdfe~p~ast~ik~s~DGqY~lAtG~YKP~ikvydlanLSLKFERhlDae~V~feiLsDD~SK~v~L~~DR~IefHak~G 125 (703)
T KOG2321|consen 46 QDFEMPTASTRIKVSPDGQYLLATGTYKPQIKVYDLANLSLKFERHLDAEVVDFEILSDDYSKSVFLQNDRTIEFHAKYG 125 (703)
T ss_pred HhcCCccccceeEecCCCcEEEEecccCCceEEEEcccceeeeeecccccceeEEEeccchhhheEeecCceeeehhhcC
Confidence 45678889999999999966788888999999999987532100 000001111111
Q ss_pred ----cce-ecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee--ecccccCCCC
Q psy4579 179 ----AVV-EVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LILGTHTSDE 251 (368)
Q Consensus 179 ----~~v-~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~d~ 251 (368)
-.| +.+.+++++.-... |+.++....|.=.+++.+. -+..+......++++..++ .++++|..++
T Consensus 126 ~hy~~RIP~~GRDm~y~~~scD-ly~~gsg~evYRlNLEqGr-------fL~P~~~~~~~lN~v~in~~hgLla~Gt~~g 197 (703)
T KOG2321|consen 126 RHYRTRIPKFGRDMKYHKPSCD-LYLVGSGSEVYRLNLEQGR-------FLNPFETDSGELNVVSINEEHGLLACGTEDG 197 (703)
T ss_pred eeeeeecCcCCccccccCCCcc-EEEeecCcceEEEEccccc-------cccccccccccceeeeecCccceEEecccCc
Confidence 001 11225666544233 4455555567777888772 3445555567888888875 4566666566
Q ss_pred ccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeee-----cCccc-----ceeEEEEeCCCCcEEEEecC
Q psy4579 252 QNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIK-----INHEG-----EVNRARYMPQNPCVIATKTP 321 (368)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~-----~~h~~-----~i~~~~~~p~~~~~lasgs~ 321 (368)
.+..|.-+ +.+....+. ..|.+ .|+++.|+.+| --++.|+.
T Consensus 198 ~VEfwDpR----------------------------~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~g-L~~aVGts 248 (703)
T KOG2321|consen 198 VVEFWDPR----------------------------DKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDG-LHVAVGTS 248 (703)
T ss_pred eEEEecch----------------------------hhhhheeeecccccCCCccccccCcceEEEecCCc-eeEEeecc
Confidence 55555322 111111110 12333 49999999998 78999999
Q ss_pred CCeEEEEECCCCCCCCCCCCCCCCcee-eecccCceeeecceee
Q psy4579 322 SSDVLVFDYTKHPSKPDPNGECHPDLR-LRGHQKEGLIEGTYNC 364 (368)
Q Consensus 322 Dg~i~iwd~~~~~~~~~~~~~~~~~~~-~~gh~~~V~~l~w~p~ 364 (368)
+|.|.|||++. ..|+.. -++..-+|..+.|.++
T Consensus 249 ~G~v~iyDLRa----------~~pl~~kdh~~e~pi~~l~~~~~ 282 (703)
T KOG2321|consen 249 TGSVLIYDLRA----------SKPLLVKDHGYELPIKKLDWQDT 282 (703)
T ss_pred CCcEEEEEccc----------CCceeecccCCccceeeeccccc
Confidence 99999999996 344322 1334557888888665
|
|
| >KOG3881|consensus | Back alignment and domain information |
|---|
Probab=98.57 E-value=2e-06 Score=73.58 Aligned_cols=182 Identities=9% Similarity=0.096 Sum_probs=113.1
Q ss_pred CeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCC--CcEEEEECCCCCCCCc
Q psy4579 142 GYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDD--HTICLWDINATPKENR 219 (368)
Q Consensus 142 ~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~d--g~i~iwd~~~~~~~~~ 219 (368)
..|++|-.+|.+.+|..+.+.... .+...+..+.+.. .+.=++....++++||.. ..++|||+.+..
T Consensus 116 g~Litc~~sG~l~~~~~k~~d~hs---s~l~~la~g~g~~----~~r~~~~~p~Iva~GGke~~n~lkiwdle~~~---- 184 (412)
T KOG3881|consen 116 GTLITCVSSGNLQVRHDKSGDLHS---SKLIKLATGPGLY----DVRQTDTDPYIVATGGKENINELKIWDLEQSK---- 184 (412)
T ss_pred CEEEEEecCCcEEEEeccCCcccc---ccceeeecCCcee----eeccCCCCCceEecCchhcccceeeeecccce----
Confidence 578889999999999998654221 1334455454332 677777767788889999 899999998762
Q ss_pred cccceeeeecccccEeEEEEeeecccccCCCCccceEEEEeecCCc--ccccccccccCCCCCcccccCCCCceeeeeec
Q psy4579 220 VIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNE--DAQFDASNYDTDKGDFGGFGSVSGKIEIEIKI 297 (368)
Q Consensus 220 ~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 297 (368)
..+.+..-+-..+. -.+.+|+....|-+. ...+..+ .+.+.+.+||...++.......
T Consensus 185 -----qiw~aKNvpnD~L~------------LrVPvW~tdi~Fl~g~~~~~fat~---T~~hqvR~YDt~~qRRPV~~fd 244 (412)
T KOG3881|consen 185 -----QIWSAKNVPNDRLG------------LRVPVWITDIRFLEGSPNYKFATI---TRYHQVRLYDTRHQRRPVAQFD 244 (412)
T ss_pred -----eeeeccCCCCcccc------------ceeeeeeccceecCCCCCceEEEE---ecceeEEEecCcccCcceeEec
Confidence 23332211111111 113445544444333 2222211 2334456666665554443333
Q ss_pred CcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeecccCceeeecceee
Q psy4579 298 NHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYNC 364 (368)
Q Consensus 298 ~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p~ 364 (368)
--..+|+++...|.+ +.+.+|..-|.+..||++... .....+.|-.+.|.++--+|.
T Consensus 245 ~~E~~is~~~l~p~g-n~Iy~gn~~g~l~~FD~r~~k---------l~g~~~kg~tGsirsih~hp~ 301 (412)
T KOG3881|consen 245 FLENPISSTGLTPSG-NFIYTGNTKGQLAKFDLRGGK---------LLGCGLKGITGSIRSIHCHPT 301 (412)
T ss_pred cccCcceeeeecCCC-cEEEEecccchhheecccCce---------eeccccCCccCCcceEEEcCC
Confidence 567899999999999 567799999999999998622 222235666777777777766
|
|
| >PRK04792 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.55 E-value=4.3e-07 Score=83.99 Aligned_cols=157 Identities=12% Similarity=0.115 Sum_probs=87.8
Q ss_pred ccCceeeEecCCcccccCCCC-ccccccCcceeeeccccC--CCCCcEEEEEEecCCCccccccCCcccCCCCc--ccCC
Q psy4579 40 EWPSLTAQWLPDVTSVQLPNE-DAQFDASNYDTDKGTHTS--DEQNHLLIASVQLPNEDAQFDASNYDTDKGGN--VQLP 114 (368)
Q Consensus 40 ~~~~~~~~~~p~~~~l~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~--i~i~ 114 (368)
+.++.+..|+|||++|++.+. ++...++.+++..|.... .... ......|.+++..+.... +.+|. |.++
T Consensus 217 ~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~lt~~~g--~~~~~~wSPDG~~La~~~---~~~g~~~Iy~~ 291 (448)
T PRK04792 217 PEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVREKVTSFPG--INGAPRFSPDGKKLALVL---SKDGQPEIYVV 291 (448)
T ss_pred CCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeEEecCCCC--CcCCeeECCCCCEEEEEE---eCCCCeEEEEE
Confidence 457888999999999988643 344455766665553211 1111 112344555444443221 23444 6666
Q ss_pred CCCeeeeeccccCCCCceeeEecCCCCCeeEEEe-CCCc--EEEEeCCCCCCCCcccccceeeeccccceecceeeEEeC
Q psy4579 115 NEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSAS-DDHT--ICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNP 191 (368)
Q Consensus 115 ~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~-~dg~--v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p 191 (368)
+.++.....+..+.......+|+|+| +.|+..+ .++. |.++|+.++. ...+....... ...+|+|
T Consensus 292 dl~tg~~~~lt~~~~~~~~p~wSpDG-~~I~f~s~~~g~~~Iy~~dl~~g~--------~~~Lt~~g~~~---~~~~~Sp 359 (448)
T PRK04792 292 DIATKALTRITRHRAIDTEPSWHPDG-KSLIFTSERGGKPQIYRVNLASGK--------VSRLTFEGEQN---LGGSITP 359 (448)
T ss_pred ECCCCCeEECccCCCCccceEECCCC-CEEEEEECCCCCceEEEEECCCCC--------EEEEecCCCCC---cCeeECC
Confidence 77665555555566667789999999 6555444 4554 5555665543 12222111222 2678999
Q ss_pred CCCCeEEEeeC-CCc--EEEEECCCC
Q psy4579 192 SLNGYLLSASD-DHT--ICLWDINAT 214 (368)
Q Consensus 192 ~~~~~l~s~s~-dg~--i~iwd~~~~ 214 (368)
+ +.+|+..+. ++. |.++|+.++
T Consensus 360 D-G~~l~~~~~~~g~~~I~~~dl~~g 384 (448)
T PRK04792 360 D-GRSMIMVNRTNGKFNIARQDLETG 384 (448)
T ss_pred C-CCEEEEEEecCCceEEEEEECCCC
Confidence 9 666655544 444 445676665
|
|
| >PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [] | Back alignment and domain information |
|---|
Probab=98.52 E-value=9.1e-06 Score=81.03 Aligned_cols=204 Identities=15% Similarity=0.160 Sum_probs=112.8
Q ss_pred CcccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeC---CCcEEEEeCCCCCCCCcccccceeee--ccccceec
Q psy4579 109 GNVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASD---DHTICLWDINATPKENRVIDAKTIFT--GHTAVVEV 183 (368)
Q Consensus 109 g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~---dg~v~iwd~~~~~~~~~~~~~~~~~~--~h~~~v~~ 183 (368)
-.+++|+.++....+...-.+--.+++|-|.| +++|+.-. ...|.+|.-+..+.. ...++ .....|.
T Consensus 237 R~iRVy~ReG~L~stSE~v~gLe~~l~WrPsG-~lIA~~q~~~~~~~VvFfErNGLrhg------eF~l~~~~~~~~v~- 308 (928)
T PF04762_consen 237 RVIRVYSREGELQSTSEPVDGLEGALSWRPSG-NLIASSQRLPDRHDVVFFERNGLRHG------EFTLRFDPEEEKVI- 308 (928)
T ss_pred eEEEEECCCceEEeccccCCCccCCccCCCCC-CEEEEEEEcCCCcEEEEEecCCcEee------eEecCCCCCCceee-
Confidence 46778888776554444444455689999999 88888764 345667765543321 12222 2345564
Q ss_pred ceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeec-ccccEeEEEEee-----ecccccCCCCccceEE
Q psy4579 184 RYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTG-HTAVVEDYSIHR-----LILGTHTSDEQNHLLI 257 (368)
Q Consensus 184 ~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~v~~v~~~~-----~~~~~~~~d~~~~~~~ 257 (368)
.++|+++ +..||..-.|. |++|-..+.. |.....+.- ....+..+.|++ +.+.+.++.-..+-|.
T Consensus 309 --~l~Wn~d-s~iLAv~~~~~-vqLWt~~NYH-----WYLKqei~~~~~~~~~~~~Wdpe~p~~L~v~t~~g~~~~~~~~ 379 (928)
T PF04762_consen 309 --ELAWNSD-SEILAVWLEDR-VQLWTRSNYH-----WYLKQEIRFSSSESVNFVKWDPEKPLRLHVLTSNGQYEIYDFA 379 (928)
T ss_pred --EEEECCC-CCEEEEEecCC-ceEEEeeCCE-----EEEEEEEEccCCCCCCceEECCCCCCEEEEEecCCcEEEEEEE
Confidence 9999999 89998877665 9999887752 222222221 223344588875 2333332222223333
Q ss_pred EEeecCCcc---cccccccccCCCCCcccccCCCCcee---eeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECC
Q psy4579 258 ASVQLPNED---AQFDASNYDTDKGDFGGFGSVSGKIE---IEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYT 331 (368)
Q Consensus 258 ~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~~~~~~~---~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~ 331 (368)
+........ ..-.+..-|... +.+-..+..-+. ......-..+|++++|++++. .+|.-..||+|.+|...
T Consensus 380 ~~v~~s~~~~~~D~g~vaVIDG~~--lllTpf~~a~VPPPMs~~~l~~~~~v~~vaf~~~~~-~~avl~~d~~l~~~~~~ 456 (928)
T PF04762_consen 380 WDVSRSPGSSPNDNGTVAVIDGNK--LLLTPFRRAVVPPPMSSYELELPSPVNDVAFSPSNS-RFAVLTSDGSLSIYEWD 456 (928)
T ss_pred EEEEecCCCCccCceEEEEEeCCe--EEEecccccCCCchHhceEEcCCCCcEEEEEeCCCC-eEEEEECCCCEEEEEec
Confidence 333322211 111122222221 111111111111 111123467899999999984 46777899999999965
Q ss_pred C
Q psy4579 332 K 332 (368)
Q Consensus 332 ~ 332 (368)
.
T Consensus 457 ~ 457 (928)
T PF04762_consen 457 L 457 (928)
T ss_pred C
Confidence 4
|
|
| >KOG2695|consensus | Back alignment and domain information |
|---|
Probab=98.52 E-value=6.1e-07 Score=75.58 Aligned_cols=97 Identities=19% Similarity=0.229 Sum_probs=69.6
Q ss_pred cccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEE
Q psy4579 110 NVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSW 189 (368)
Q Consensus 110 ~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~ 189 (368)
.+-+-|..+..... +..+..|.++.|...+ +++..|+..|.|...|++...... ..+...+. |.+.|+ ++..
T Consensus 235 qv~L~nvetg~~qs-f~sksDVfAlQf~~s~-nLv~~GcRngeI~~iDLR~rnqG~--~~~a~rly-h~Ssvt---slq~ 306 (425)
T KOG2695|consen 235 QVLLTNVETGHQQS-FQSKSDVFALQFAGSD-NLVFNGCRNGEIFVIDLRCRNQGN--GWCAQRLY-HDSSVT---SLQI 306 (425)
T ss_pred eeEEEEeecccccc-cccchhHHHHHhcccC-CeeEecccCCcEEEEEeeecccCC--CcceEEEE-cCcchh---hhhh
Confidence 33344444333323 3367889999999887 899999999999999998753211 12334444 788886 7776
Q ss_pred eCCCCCeEEEeeCCCcEEEEECCCC
Q psy4579 190 NPSLNGYLLSASDDHTICLWDINAT 214 (368)
Q Consensus 190 ~p~~~~~l~s~s~dg~i~iwd~~~~ 214 (368)
-...+++|++.+.+|+|++||+|.-
T Consensus 307 Lq~s~q~LmaS~M~gkikLyD~R~~ 331 (425)
T KOG2695|consen 307 LQFSQQKLMASDMTGKIKLYDLRAT 331 (425)
T ss_pred hccccceEeeccCcCceeEeeehhh
Confidence 6633788999999999999999875
|
|
| >KOG4190|consensus | Back alignment and domain information |
|---|
Probab=98.51 E-value=3.3e-07 Score=81.77 Aligned_cols=178 Identities=16% Similarity=0.160 Sum_probs=112.4
Q ss_pred eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEE
Q psy4579 119 QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLL 198 (368)
Q Consensus 119 ~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~ 198 (368)
-....+.+|+..|..+.--.+. +.+++++.|++|++|.++..........+..++..|+.+|. ++.|-.+ ..+++
T Consensus 726 irL~nf~GH~~~iRai~AidNE-NSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~---~igfL~~-lr~i~ 800 (1034)
T KOG4190|consen 726 IRLCNFTGHQEKIRAIAAIDNE-NSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIH---DIGFLAD-LRSIA 800 (1034)
T ss_pred eeeecccCcHHHhHHHHhcccc-cceeeccCCceEEEEEeccccCccccceeeeEhhhccCccc---ceeeeec-cceee
Confidence 3445677899999988776664 88999999999999999876554444446678899999996 9999876 55665
Q ss_pred EeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEE-eeecc-cccCCCCccceEEEEeecCCcccccccccccC
Q psy4579 199 SASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSI-HRLIL-GTHTSDEQNHLLIASVQLPNEDAQFDASNYDT 276 (368)
Q Consensus 199 s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~-~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~ 276 (368)
+ .||-|.+||.-.+....+..... -.+....|.++.- +..++ +.++...++++
T Consensus 801 S--cD~giHlWDPFigr~Laq~~dap--k~~a~~~ikcl~nv~~~iliAgcsaeSTVKl--------------------- 855 (1034)
T KOG4190|consen 801 S--CDGGIHLWDPFIGRLLAQMEDAP--KEGAGGNIKCLENVDRHILIAGCSAESTVKL--------------------- 855 (1034)
T ss_pred e--ccCcceeecccccchhHhhhcCc--ccCCCceeEecccCcchheeeeccchhhhee---------------------
Confidence 5 58999999976552211110000 0111223333332 22222 22222222222
Q ss_pred CCCCcccccCCCCceeeeeec----CcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCC
Q psy4579 277 DKGDFGGFGSVSGKIEIEIKI----NHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHP 334 (368)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~----~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~ 334 (368)
+|.++.+-..+.+. +-.+.+.+++..|.| +.+|.|=..|+|.+-|.++..
T Consensus 856 -------~DaRsce~~~E~kVcna~~Pna~~R~iaVa~~G-N~lAa~LSnGci~~LDaR~G~ 909 (1034)
T KOG4190|consen 856 -------FDARSCEWTCELKVCNAPGPNALTRAIAVADKG-NKLAAALSNGCIAILDARNGK 909 (1034)
T ss_pred -------eecccccceeeEEeccCCCCchheeEEEeccCc-chhhHHhcCCcEEEEecCCCc
Confidence 22222222222221 345678999999999 678888889999999998754
|
|
| >PRK01029 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.50 E-value=9.5e-06 Score=74.61 Aligned_cols=93 Identities=14% Similarity=0.072 Sum_probs=53.1
Q ss_pred CcccCCCCCeeeeeccccCCCCceeeEecCCCCC--eeEEEeCCC--cEEEEeCCCCCCCCcccccceeeeccccceecc
Q psy4579 109 GNVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNG--YLLSASDDH--TICLWDINATPKENRVIDAKTIFTGHTAVVEVR 184 (368)
Q Consensus 109 g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~--~lasg~~dg--~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~ 184 (368)
..|.+.+.++.....+......+.+-+|+|+|.. ++.+...+| .|.+.++.++.. ..+....+..
T Consensus 165 ~~l~~~d~dG~~~~~lt~~~~~~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g~~--------~~lt~~~g~~--- 233 (428)
T PRK01029 165 GELWSVDYDGQNLRPLTQEHSLSITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLENPAG--------KKILALQGNQ--- 233 (428)
T ss_pred ceEEEEcCCCCCceEcccCCCCcccceEccCCCceEEEEEEccCCCceEEEEECCCCCc--------eEeecCCCCc---
Confidence 3566666666544444445556777899999833 222444444 577778776532 2222233333
Q ss_pred eeeEEeCCCCCeEEEee-CCC----cEEEEECCC
Q psy4579 185 YGLSWNPSLNGYLLSAS-DDH----TICLWDINA 213 (368)
Q Consensus 185 ~~i~~~p~~~~~l~s~s-~dg----~i~iwd~~~ 213 (368)
...+|+|+ ++.|+..+ .+| .+.+||+..
T Consensus 234 ~~p~wSPD-G~~Laf~s~~~g~~di~~~~~~~~~ 266 (428)
T PRK01029 234 LMPTFSPR-KKLLAFISDRYGNPDLFIQSFSLET 266 (428)
T ss_pred cceEECCC-CCEEEEEECCCCCcceeEEEeeccc
Confidence 37899999 66665543 333 345577665
|
|
| >PRK00178 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.50 E-value=2e-06 Score=79.52 Aligned_cols=161 Identities=11% Similarity=0.040 Sum_probs=90.0
Q ss_pred ccCceeeEecCCcccccCCCCc-cccccCcceeeeccccCCCCCcEEEEEEecCCCccccccCCcccCCCCcccCCCCCe
Q psy4579 40 EWPSLTAQWLPDVTSVQLPNED-AQFDASNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDA 118 (368)
Q Consensus 40 ~~~~~~~~~~p~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~ 118 (368)
..++.+..|+|||++|++.+.+ +.-.++.+++..|....-....-......|.+++..+.... ...++..|.+++.++
T Consensus 198 ~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~l~~~~g~~~~~~~SpDG~~la~~~-~~~g~~~Iy~~d~~~ 276 (430)
T PRK00178 198 REPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQITNFEGLNGAPAWSPDGSKLAFVL-SKDGNPEIYVMDLAS 276 (430)
T ss_pred CCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEEccCCCCCcCCeEECCCCCEEEEEE-ccCCCceEEEEECCC
Confidence 4577889999999999876543 33345666665553221110001122345655444433211 111233566778776
Q ss_pred eeeeccccCCCCceeeEecCCCCCeeEEEe-CCC--cEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCC
Q psy4579 119 QFDASNYDTDKGGYGLSWNPSLNGYLLSAS-DDH--TICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNG 195 (368)
Q Consensus 119 ~~~~~~~~h~~~v~~l~~sp~~~~~lasg~-~dg--~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~ 195 (368)
.....+..+........|+|+| +.|+..+ .+| .|.++|+.++.. ..+....... ....|+|+ ++
T Consensus 277 ~~~~~lt~~~~~~~~~~~spDg-~~i~f~s~~~g~~~iy~~d~~~g~~--------~~lt~~~~~~---~~~~~Spd-g~ 343 (430)
T PRK00178 277 RQLSRVTNHPAIDTEPFWGKDG-RTLYFTSDRGGKPQIYKVNVNGGRA--------ERVTFVGNYN---ARPRLSAD-GK 343 (430)
T ss_pred CCeEEcccCCCCcCCeEECCCC-CEEEEEECCCCCceEEEEECCCCCE--------EEeecCCCCc---cceEECCC-CC
Confidence 5555555566667788999999 6555444 444 466667665531 1111111122 26789999 77
Q ss_pred eEEEeeC-CC--cEEEEECCCC
Q psy4579 196 YLLSASD-DH--TICLWDINAT 214 (368)
Q Consensus 196 ~l~s~s~-dg--~i~iwd~~~~ 214 (368)
.|+..+. ++ .|.+||+.++
T Consensus 344 ~i~~~~~~~~~~~l~~~dl~tg 365 (430)
T PRK00178 344 TLVMVHRQDGNFHVAAQDLQRG 365 (430)
T ss_pred EEEEEEccCCceEEEEEECCCC
Confidence 7666554 33 5788898775
|
|
| >PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal | Back alignment and domain information |
|---|
Probab=98.49 E-value=4.4e-05 Score=63.24 Aligned_cols=191 Identities=15% Similarity=0.149 Sum_probs=99.9
Q ss_pred ceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeec-cccceecceeeEEeCCC-----CCeEEEeeCCC
Q psy4579 131 GYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTG-HTAVVEVRYGLSWNPSL-----NGYLLSASDDH 204 (368)
Q Consensus 131 v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~i~~~p~~-----~~~l~s~s~dg 204 (368)
=+-++||||+ .+||.+...|+|++||+.....- .+.+...+.+ -...|. ++.|.+.. ...|+.-..+|
T Consensus 46 WRkl~WSpD~-tlLa~a~S~G~i~vfdl~g~~lf--~I~p~~~~~~d~~~Aia---gl~Fl~~~~s~~ws~ELlvi~Y~G 119 (282)
T PF15492_consen 46 WRKLAWSPDC-TLLAYAESTGTIRVFDLMGSELF--VIPPAMSFPGDLSDAIA---GLIFLEYKKSAQWSYELLVINYRG 119 (282)
T ss_pred heEEEECCCC-cEEEEEcCCCeEEEEecccceeE--EcCcccccCCcccccee---eeEeeccccccccceeEEEEeccc
Confidence 3458999999 99999999999999999854210 1111111111 122332 55565432 22466667888
Q ss_pred cEEEEECCCCCCCCccccceee--eec-ccccEeEEEEee---ecccccCCCCcc--------ceEEEEeecCCcccccc
Q psy4579 205 TICLWDINATPKENRVIDAKTI--FTG-HTAVVEDYSIHR---LILGTHTSDEQN--------HLLIASVQLPNEDAQFD 270 (368)
Q Consensus 205 ~i~iwd~~~~~~~~~~~~~~~~--~~~-~~~~v~~v~~~~---~~~~~~~~d~~~--------~~~~~~~~~~~~~~~~~ 270 (368)
.++=|-+..+.... ...... +.. +...|+++.+++ +++..++...+. .+-.+++-. ...-...
T Consensus 120 ~L~Sy~vs~gt~q~--y~e~hsfsf~~~yp~Gi~~~vy~p~h~LLlVgG~~~~~~~~s~a~~~GLtaWRiL~-~~Pyyk~ 196 (282)
T PF15492_consen 120 QLRSYLVSVGTNQG--YQENHSFSFSSHYPHGINSAVYHPKHRLLLVGGCEQNQDGMSKASSCGLTAWRILS-DSPYYKQ 196 (282)
T ss_pred eeeeEEEEcccCCc--ceeeEEEEecccCCCceeEEEEcCCCCEEEEeccCCCCCccccccccCceEEEEcC-CCCcEEE
Confidence 88877653321100 011222 222 467899999986 333333332221 122222211 1111111
Q ss_pred cccccCCCC----CcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCC
Q psy4579 271 ASNYDTDKG----DFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 271 ~~~~d~~~~----~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
+..++.... ...++.+.+.+.. .........|..+..+|+| .+||+...+|.|.+|++..
T Consensus 197 v~~~~~~~~~~~~~~~~~~~~~~~~f-s~~~~~~d~i~kmSlSPdg-~~La~ih~sG~lsLW~iPs 260 (282)
T PF15492_consen 197 VTSSEDDITASSKRRGLLRIPSFKFF-SRQGQEQDGIFKMSLSPDG-SLLACIHFSGSLSLWEIPS 260 (282)
T ss_pred ccccCccccccccccceeeccceeee-eccccCCCceEEEEECCCC-CEEEEEEcCCeEEEEecCc
Confidence 112211110 1111111111111 1111346689999999999 7899999999999999975
|
|
| >KOG4532|consensus | Back alignment and domain information |
|---|
Probab=98.48 E-value=1.1e-05 Score=65.87 Aligned_cols=98 Identities=10% Similarity=0.105 Sum_probs=67.0
Q ss_pred CCCcccCCCCCeeeeeccccCCC--CceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecc
Q psy4579 107 KGGNVQLPNEDAQFDASNYDTDK--GGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVR 184 (368)
Q Consensus 107 ~~g~i~i~~~~~~~~~~~~~h~~--~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~ 184 (368)
.|-++++...++..... .-|.. .+.++.+++++ .++++.+....|..|.+...... ...+....+..- +
T Consensus 136 ndht~k~~~~~~~s~~~-~~h~~~~~~ns~~~snd~-~~~~~Vgds~~Vf~y~id~~sey-----~~~~~~a~t~D~--g 206 (344)
T KOG4532|consen 136 NDHTGKTMVVSGDSNKF-AVHNQNLTQNSLHYSNDP-SWGSSVGDSRRVFRYAIDDESEY-----IENIYEAPTSDH--G 206 (344)
T ss_pred CCcceeEEEEecCcccc-eeeccccceeeeEEcCCC-ceEEEecCCCcceEEEeCCccce-----eeeeEecccCCC--c
Confidence 45555555554432222 12333 37889999998 99999999999999999765432 122222222111 1
Q ss_pred eeeEEeCCCCCeEEEeeCCCcEEEEECCCC
Q psy4579 185 YGLSWNPSLNGYLLSASDDHTICLWDINAT 214 (368)
Q Consensus 185 ~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~ 214 (368)
++..|+.. ...+|++..||++.|||+|..
T Consensus 207 F~~S~s~~-~~~FAv~~Qdg~~~I~DVR~~ 235 (344)
T KOG4532|consen 207 FYNSFSEN-DLQFAVVFQDGTCAIYDVRNM 235 (344)
T ss_pred eeeeeccC-cceEEEEecCCcEEEEEeccc
Confidence 58899988 889999999999999999886
|
|
| >KOG3914|consensus | Back alignment and domain information |
|---|
Probab=98.44 E-value=4.4e-06 Score=71.89 Aligned_cols=158 Identities=12% Similarity=0.108 Sum_probs=96.8
Q ss_pred CceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEe---eCCCcE
Q psy4579 130 GGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSA---SDDHTI 206 (368)
Q Consensus 130 ~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~---s~dg~i 206 (368)
....+..+|.+ .++|.+..+....++++....+.. ++.........+- ++.|..+ ......+ +....+
T Consensus 64 a~~~~~~s~~~-~llAv~~~~K~~~~f~~~~~~~~~---kl~~~~~v~~~~~----ai~~~~~-~~sv~v~dkagD~~~~ 134 (390)
T KOG3914|consen 64 APALVLTSDSG-RLVAVATSSKQRAVFDYRENPKGA---KLLDVSCVPKRPT----AISFIRE-DTSVLVADKAGDVYSF 134 (390)
T ss_pred cccccccCCCc-eEEEEEeCCCceEEEEEecCCCcc---eeeeEeecccCcc----eeeeeec-cceEEEEeecCCceee
Confidence 34445667777 899999888888788877654311 1223333333332 6666655 4444444 444455
Q ss_pred EEEECCCCCCCCccccceeeeecccccEeEEEEee--ecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccc
Q psy4579 207 CLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGF 284 (368)
Q Consensus 207 ~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 284 (368)
.+|....+ +...+.||-..+.+|++++ ..+.+++.|..+++ ... .
T Consensus 135 di~s~~~~--------~~~~~lGhvSml~dVavS~D~~~IitaDRDEkIRv--s~y--------------p--------- 181 (390)
T KOG3914|consen 135 DILSADSG--------RCEPILGHVSMLLDVAVSPDDQFIITADRDEKIRV--SRY--------------P--------- 181 (390)
T ss_pred eeeccccc--------CcchhhhhhhhhheeeecCCCCEEEEecCCceEEE--Eec--------------C---------
Confidence 55554432 1244668999999999986 34444444443333 211 0
Q ss_pred cCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCC
Q psy4579 285 GSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHP 334 (368)
Q Consensus 285 ~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~ 334 (368)
....+-.+..||..-|..++.-++. .|+|||.|+++++||+++.+
T Consensus 182 ---a~f~IesfclGH~eFVS~isl~~~~--~LlS~sGD~tlr~Wd~~sgk 226 (390)
T KOG3914|consen 182 ---ATFVIESFCLGHKEFVSTISLTDNY--LLLSGSGDKTLRLWDITSGK 226 (390)
T ss_pred ---cccchhhhccccHhheeeeeeccCc--eeeecCCCCcEEEEecccCC
Confidence 0111222334899999999998876 46799999999999998744
|
|
| >KOG1354|consensus | Back alignment and domain information |
|---|
Probab=98.43 E-value=3.4e-06 Score=71.18 Aligned_cols=83 Identities=17% Similarity=0.223 Sum_probs=58.1
Q ss_pred CCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccc------------cceecceeeEEeCCC-
Q psy4579 127 TDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHT------------AVVEVRYGLSWNPSL- 193 (368)
Q Consensus 127 h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~------------~~v~~~~~i~~~p~~- 193 (368)
..+-|.++.|...| .+||||..+|.|-++.-+..... .......++.|. ..| ..+.|.++.
T Consensus 24 eadiis~vef~~~G-e~LatGdkgGRVv~f~r~~~~~~--ey~~~t~fqshepEFDYLkSleieEKi---nkIrw~~~~n 97 (433)
T KOG1354|consen 24 EADIISAVEFDHYG-ERLATGDKGGRVVLFEREKLYKG--EYNFQTEFQSHEPEFDYLKSLEIEEKI---NKIRWLDDGN 97 (433)
T ss_pred hhcceeeEEeeccc-ceEeecCCCCeEEEeeccccccc--ceeeeeeeeccCcccchhhhhhhhhhh---hhceecCCCC
Confidence 34568999999999 99999999999999976543321 111223444443 234 388998762
Q ss_pred CCeEEEeeCCCcEEEEECCCCC
Q psy4579 194 NGYLLSASDDHTICLWDINATP 215 (368)
Q Consensus 194 ~~~l~s~s~dg~i~iwd~~~~~ 215 (368)
...++....|.+|++|.++...
T Consensus 98 ~a~FLlstNdktiKlWKi~er~ 119 (433)
T KOG1354|consen 98 LAEFLLSTNDKTIKLWKIRERG 119 (433)
T ss_pred ccEEEEecCCcceeeeeeeccc
Confidence 3357777899999999987653
|
|
| >KOG2041|consensus | Back alignment and domain information |
|---|
Probab=98.42 E-value=5.4e-06 Score=76.49 Aligned_cols=153 Identities=11% Similarity=0.139 Sum_probs=103.6
Q ss_pred ceeeEecCCcccccCCCCccccccCcceeeeccccCC----------------CCCcEEEEEEecCCCccccccCCcccC
Q psy4579 43 SLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSD----------------EQNHLLIASVQLPNEDAQFDASNYDTD 106 (368)
Q Consensus 43 ~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~i~~~~~~~~~~~~~~~~~~~~ 106 (368)
..|+.|.....++|+|+.||.+.+. ++.+.+.... +...-.+..++|.....++..+.
T Consensus 17 L~c~~WNke~gyIAcgG~dGlLKVl--Kl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTtSD---- 90 (1189)
T KOG2041|consen 17 LHCAEWNKESGYIACGGADGLLKVL--KLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLTTSD---- 90 (1189)
T ss_pred EEEEEEcccCCeEEeccccceeEEE--EccccCCcccccccccccccchhhhhccCcceEEEEEeccccccccccC----
Confidence 5689999999999999999988543 3222111110 11234567777776666666543
Q ss_pred CCCcccCCCCC-eeeeecccc--CCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceec
Q psy4579 107 KGGNVQLPNED-AQFDASNYD--TDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEV 183 (368)
Q Consensus 107 ~~g~i~i~~~~-~~~~~~~~~--h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~ 183 (368)
.+|-|.+|-+= +.-.....+ .+.-|.+++|+.+| ..++..-.||.|.+=.++..+.= -+.+++.. ..
T Consensus 91 t~GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG-~kIcIvYeDGavIVGsvdGNRIw------gKeLkg~~--l~- 160 (1189)
T KOG2041|consen 91 TSGLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDG-TKICIVYEDGAVIVGSVDGNRIW------GKELKGQL--LA- 160 (1189)
T ss_pred CCceEEEEeeecccHHHHHhhCcCccEEEEEEEcCCC-cEEEEEEccCCEEEEeeccceec------chhcchhe--cc-
Confidence 68999999753 332222222 44568999999999 89999999999998877754310 12233322 11
Q ss_pred ceeeEEeCCCCCeEEEeeCCCcEEEEECCCC
Q psy4579 184 RYGLSWNPSLNGYLLSASDDHTICLWDINAT 214 (368)
Q Consensus 184 ~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~ 214 (368)
.+.|++| ...++.+-..|.+.+||....
T Consensus 161 --hv~ws~D-~~~~Lf~~ange~hlydnqgn 188 (1189)
T KOG2041|consen 161 --HVLWSED-LEQALFKKANGETHLYDNQGN 188 (1189)
T ss_pred --ceeeccc-HHHHHhhhcCCcEEEeccccc
Confidence 7889998 777778888999999997654
|
|
| >KOG1409|consensus | Back alignment and domain information |
|---|
Probab=98.41 E-value=9.5e-06 Score=68.54 Aligned_cols=216 Identities=13% Similarity=0.197 Sum_probs=126.0
Q ss_pred EEecCCCccccccCCcccCCCCcccCCCCC--eeeeecc-ccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCC
Q psy4579 88 SVQLPNEDAQFDASNYDTDKGGNVQLPNED--AQFDASN-YDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKE 164 (368)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~--~~~~~~~-~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~ 164 (368)
.+.+|.+...+.++ .|-++++|-.. ++.-... ..-..+++++.+.++. ..|..|-..|++.-+.+...-..
T Consensus 30 ~~l~~~e~gv~~~s-----~drtvrv~lkrds~q~wpsI~~~mP~~~~~~~y~~e~-~~L~vg~~ngtvtefs~sedfnk 103 (404)
T KOG1409|consen 30 AILIPKEEGVISVS-----EDRTVRVWLKRDSGQYWPSIYHYMPSPCSAMEYVSES-RRLYVGQDNGTVTEFALSEDFNK 103 (404)
T ss_pred heeccCCCCeEEcc-----ccceeeeEEeccccccCchhhhhCCCCceEeeeeccc-eEEEEEEecceEEEEEhhhhhhh
Confidence 44456666555544 48889988542 2222222 2245689999999997 89999999999998876532111
Q ss_pred CcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeeecc
Q psy4579 165 NRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLIL 244 (368)
Q Consensus 165 ~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~ 244 (368)
....+.+..|...+. .+-|+-. ...+++.+.|..+.---.+.+..... ..+.. ...+..+.-..
T Consensus 104 ---m~~~r~~~~h~~~v~---~~if~~~-~e~V~s~~~dk~~~~hc~e~~~~lg~-----Y~~~~---~~t~~~~d~~~- 167 (404)
T KOG1409|consen 104 ---MTFLKDYLAHQARVS---AIVFSLT-HEWVLSTGKDKQFAWHCTESGNRLGG-----YNFET---PASALQFDALY- 167 (404)
T ss_pred ---cchhhhhhhhhccee---eEEecCC-ceeEEEeccccceEEEeeccCCcccc-----eEeec---cCCCCceeeEE-
Confidence 124566778999995 8888876 88899999998775333333321100 00100 00001110000
Q ss_pred cccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCe
Q psy4579 245 GTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSD 324 (368)
Q Consensus 245 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~ 324 (368)
..-+|....+-.++. ....-.++.++. +|.+.+.+++|.|.. .+|.+|..|..
T Consensus 168 -~fvGd~~gqvt~lr~------------------------~~~~~~~i~~~~-~h~~~~~~l~Wd~~~-~~LfSg~~d~~ 220 (404)
T KOG1409|consen 168 -AFVGDHSGQITMLKL------------------------EQNGCQLITTFN-GHTGEVTCLKWDPGQ-RLLFSGASDHS 220 (404)
T ss_pred -EEecccccceEEEEE------------------------eecCCceEEEEc-CcccceEEEEEcCCC-cEEEeccccCc
Confidence 000000111111110 001122334444 899999999999988 67779999999
Q ss_pred EEEEECCCCCCCCCCCCCCCCceeeecccCceeeecc
Q psy4579 325 VLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGT 361 (368)
Q Consensus 325 i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w 361 (368)
|.+||+-. ..-....+.||.+.|..+..
T Consensus 221 vi~wdigg---------~~g~~~el~gh~~kV~~l~~ 248 (404)
T KOG1409|consen 221 VIMWDIGG---------RKGTAYELQGHNDKVQALSY 248 (404)
T ss_pred eEEEeccC---------Ccceeeeeccchhhhhhhhh
Confidence 99999963 12223456778777766544
|
|
| >KOG4532|consensus | Back alignment and domain information |
|---|
Probab=98.40 E-value=1.1e-05 Score=65.85 Aligned_cols=172 Identities=10% Similarity=-0.045 Sum_probs=94.1
Q ss_pred CeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccc
Q psy4579 142 GYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVI 221 (368)
Q Consensus 142 ~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 221 (368)
..||.|+.-|...+|...+... .......|...|+..-..+- . ..-+..++.|.++++.++..+..
T Consensus 85 ~~la~gG~~g~fd~~~~~tn~~------h~~~cd~snn~v~~~~r~cd--~-~~~~~i~sndht~k~~~~~~~s~----- 150 (344)
T KOG4532|consen 85 VTLADGGASGQFDLFACNTNDG------HLYQCDVSNNDVTLVKRYCD--L-KFPLNIASNDHTGKTMVVSGDSN----- 150 (344)
T ss_pred cEEEeccccceeeeecccCccc------ceeeecccccchhhhhhhcc--c-ccceeeccCCcceeEEEEecCcc-----
Confidence 5899999999999999886543 12233334443321001111 1 33466778899999888876521
Q ss_pred cceeeeeccccc--EeEEEEee--ecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeec
Q psy4579 222 DAKTIFTGHTAV--VEDYSIHR--LILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKI 297 (368)
Q Consensus 222 ~~~~~~~~~~~~--v~~v~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 297 (368)
.+..|... ++++++++ ...++.+.. .+++... .|-.+...+.....
T Consensus 151 ----~~~~h~~~~~~ns~~~snd~~~~~~Vgds--~~Vf~y~------------------------id~~sey~~~~~~a 200 (344)
T KOG4532|consen 151 ----KFAVHNQNLTQNSLHYSNDPSWGSSVGDS--RRVFRYA------------------------IDDESEYIENIYEA 200 (344)
T ss_pred ----cceeeccccceeeeEEcCCCceEEEecCC--CcceEEE------------------------eCCccceeeeeEec
Confidence 12223322 55566553 111111111 1111111 11111111111122
Q ss_pred CcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeecccCceeeeccee
Q psy4579 298 NHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYN 363 (368)
Q Consensus 298 ~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p 363 (368)
...+.-.+..|+... ..+|+++.||++.|||+|....--....+.+ ..|.+.+..+.|+|
T Consensus 201 ~t~D~gF~~S~s~~~-~~FAv~~Qdg~~~I~DVR~~~tpm~~~sstr-----p~hnGa~R~c~Fsl 260 (344)
T KOG4532|consen 201 PTSDHGFYNSFSEND-LQFAVVFQDGTCAIYDVRNMATPMAEISSTR-----PHHNGAFRVCRFSL 260 (344)
T ss_pred ccCCCceeeeeccCc-ceEEEEecCCcEEEEEecccccchhhhcccC-----CCCCCceEEEEecC
Confidence 344556778899888 6899999999999999997442211111112 24889999999987
|
|
| >KOG4497|consensus | Back alignment and domain information |
|---|
Probab=98.33 E-value=1.3e-06 Score=73.12 Aligned_cols=114 Identities=16% Similarity=0.253 Sum_probs=76.3
Q ss_pred cccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEE
Q psy4579 110 NVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSW 189 (368)
Q Consensus 110 ~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~ 189 (368)
.+.|-|.++-.+..++.--+.|.-+.|..+....|.....|+.|.+|++.... -...+..-...+. +++|
T Consensus 30 rlviRd~~tlq~~qlf~cldki~yieW~ads~~ilC~~yk~~~vqvwsl~Qpe-------w~ckIdeg~agls---~~~W 99 (447)
T KOG4497|consen 30 RLVIRDSETLQLHQLFLCLDKIVYIEWKADSCHILCVAYKDPKVQVWSLVQPE-------WYCKIDEGQAGLS---SISW 99 (447)
T ss_pred EEEEeccchhhHHHHHHHHHHhhheeeeccceeeeeeeeccceEEEEEeecce-------eEEEeccCCCcce---eeeE
Confidence 34455554433334444456778899998874566666789999999998653 2244444555664 9999
Q ss_pred eCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee
Q psy4579 190 NPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR 241 (368)
Q Consensus 190 ~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~ 241 (368)
+|++-.+|.+...|-.|.+|.+.+... ..++-....+..++|++
T Consensus 100 SPdgrhiL~tseF~lriTVWSL~t~~~--------~~~~~pK~~~kg~~f~~ 143 (447)
T KOG4497|consen 100 SPDGRHILLTSEFDLRITVWSLNTQKG--------YLLPHPKTNVKGYAFHP 143 (447)
T ss_pred CCCcceEeeeecceeEEEEEEecccee--------EEecccccCceeEEECC
Confidence 999446788888899999999988631 22232334456777875
|
|
| >PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats | Back alignment and domain information |
|---|
Probab=98.29 E-value=4.6e-06 Score=75.62 Aligned_cols=80 Identities=15% Similarity=0.276 Sum_probs=64.7
Q ss_pred eeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEe
Q psy4579 121 DASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSA 200 (368)
Q Consensus 121 ~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~ 200 (368)
..+....+..|.|++++|+. ..|+.|+.||+|.+||...+. ..+....-..+ .++|||+ +.++++|
T Consensus 252 svtsipL~s~v~~ca~sp~E-~kLvlGC~DgSiiLyD~~~~~---------t~~~ka~~~P~---~iaWHp~-gai~~V~ 317 (545)
T PF11768_consen 252 SVTSIPLPSQVICCARSPSE-DKLVLGCEDGSIILYDTTRGV---------TLLAKAEFIPT---LIAWHPD-GAIFVVG 317 (545)
T ss_pred EEEEEecCCcceEEecCccc-ceEEEEecCCeEEEEEcCCCe---------eeeeeecccce---EEEEcCC-CcEEEEE
Confidence 34556788999999999997 999999999999999997752 22222222333 9999999 9999999
Q ss_pred eCCCcEEEEECCCC
Q psy4579 201 SDDHTICLWDINAT 214 (368)
Q Consensus 201 s~dg~i~iwd~~~~ 214 (368)
+..|.+.+||+.-.
T Consensus 318 s~qGelQ~FD~ALs 331 (545)
T PF11768_consen 318 SEQGELQCFDMALS 331 (545)
T ss_pred cCCceEEEEEeecC
Confidence 99999999998765
|
|
| >COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.27 E-value=9.4e-05 Score=63.22 Aligned_cols=154 Identities=17% Similarity=0.198 Sum_probs=88.0
Q ss_pred eEecCCcccccCCCC---ccccccCcceee--eccccCC----CCCcEEEEEEecCCCccccccCCcccCCCCcccCCCC
Q psy4579 46 AQWLPDVTSVQLPNE---DAQFDASNYDTD--KGTHTSD----EQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNE 116 (368)
Q Consensus 46 ~~~~p~~~~l~~~~~---~~~~~~~~~~~~--~~~~~~~----~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~ 116 (368)
+.|.|+.++|-++.+ +|.+ ..|.+. .|..+.- ..... -..+.+.+.+..+..+.|. .|.|.++.+
T Consensus 45 l~~~~~~~~LY~v~~~~~~ggv--aay~iD~~~G~Lt~ln~~~~~g~~-p~yvsvd~~g~~vf~AnY~---~g~v~v~p~ 118 (346)
T COG2706 45 LAVNPDQRHLYVVNEPGEEGGV--AAYRIDPDDGRLTFLNRQTLPGSP-PCYVSVDEDGRFVFVANYH---SGSVSVYPL 118 (346)
T ss_pred EEECCCCCEEEEEEecCCcCcE--EEEEEcCCCCeEEEeeccccCCCC-CeEEEECCCCCEEEEEEcc---CceEEEEEc
Confidence 888888887766533 3444 333333 1332221 01000 1333444455455566665 366666654
Q ss_pred Ce----eeeeccccCCCC----------ceeeEecCCCCCeeEEEe-CCCcEEEEeCCCCCCCCcccccceeeeccccce
Q psy4579 117 DA----QFDASNYDTDKG----------GYGLSWNPSLNGYLLSAS-DDHTICLWDINATPKENRVIDAKTIFTGHTAVV 181 (368)
Q Consensus 117 ~~----~~~~~~~~h~~~----------v~~l~~sp~~~~~lasg~-~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v 181 (368)
.. ........|.+. +.+..+.|++ ++|++.. .--.|.+|++..++.... .+ ..++.-.++
T Consensus 119 ~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~-~~l~v~DLG~Dri~~y~~~dg~L~~~--~~-~~v~~G~GP- 193 (346)
T COG2706 119 QADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDG-RYLVVPDLGTDRIFLYDLDDGKLTPA--DP-AEVKPGAGP- 193 (346)
T ss_pred ccCCccccceeeeecCCCCCCccccCCccceeeeCCCC-CEEEEeecCCceEEEEEcccCccccc--cc-cccCCCCCc-
Confidence 32 112223345444 8889999999 7777775 334688999986643211 11 122333333
Q ss_pred ecceeeEEeCCCCCeEEEee-CCCcEEEEECCCC
Q psy4579 182 EVRYGLSWNPSLNGYLLSAS-DDHTICLWDINAT 214 (368)
Q Consensus 182 ~~~~~i~~~p~~~~~l~s~s-~dg~i~iwd~~~~ 214 (368)
+ .|.|+|+ +.+..... -+++|-+|.....
T Consensus 194 R---Hi~FHpn-~k~aY~v~EL~stV~v~~y~~~ 223 (346)
T COG2706 194 R---HIVFHPN-GKYAYLVNELNSTVDVLEYNPA 223 (346)
T ss_pred c---eEEEcCC-CcEEEEEeccCCEEEEEEEcCC
Confidence 3 8999998 77766554 5899999998774
|
|
| >COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.25 E-value=3.8e-06 Score=70.01 Aligned_cols=185 Identities=17% Similarity=0.257 Sum_probs=92.7
Q ss_pred CCceeeEecCC-CCCeeEEEeCCCcEEEEeCCCCCCCC----------------c------c-------------cccce
Q psy4579 129 KGGYGLSWNPS-LNGYLLSASDDHTICLWDINATPKEN----------------R------V-------------IDAKT 172 (368)
Q Consensus 129 ~~v~~l~~sp~-~~~~lasg~~dg~v~iwd~~~~~~~~----------------~------~-------------~~~~~ 172 (368)
..|..+.|..+ +...++..+.|.+|++|.+....... . . ..+.+
T Consensus 86 EKin~I~w~~~t~r~hFLlstNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~r 165 (460)
T COG5170 86 EKINAIEWFDDTGRNHFLLSTNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCR 165 (460)
T ss_pred HHhhheeeecCCCcceEEEecCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccce
Confidence 56777888744 33456667789999999987541100 0 0 00111
Q ss_pred ee-eccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccce-eeeecccccEeEEEEee---eccccc
Q psy4579 173 IF-TGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAK-TIFTGHTAVVEDYSIHR---LILGTH 247 (368)
Q Consensus 173 ~~-~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~v~~v~~~~---~~~~~~ 247 (368)
.+ ..|.-.+. ++.|+.+ ...+++ +.|-.|.+|++.-....-++.... ..+..-+.-|++..|+| .+++-.
T Consensus 166 vyaNaH~yhiN---SiS~NsD-~et~lS-aDdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYS 240 (460)
T COG5170 166 VYANAHPYHIN---SISFNSD-KETLLS-ADDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYS 240 (460)
T ss_pred eccccceeEee---eeeecCc-hheeee-ccceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEe
Confidence 22 34655664 8999987 666666 468899999987654322111000 01111233466777776 222222
Q ss_pred CCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEE
Q psy4579 248 TSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLV 327 (368)
Q Consensus 248 ~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~i 327 (368)
++.+.+++...+.. ..+|.... ++...-......+..+-...|..+.|+|+| +++++- .=-+|+|
T Consensus 241 sSkG~Ikl~DlRq~----------alcdn~~k---lfe~~~D~v~~~ff~eivsSISD~kFs~ng-ryIlsR-dyltvki 305 (460)
T COG5170 241 SSKGEIKLNDLRQS----------ALCDNSKK---LFELTIDGVDVDFFEEIVSSISDFKFSDNG-RYILSR-DYLTVKI 305 (460)
T ss_pred cCCCcEEehhhhhh----------hhccCchh---hhhhccCcccchhHHHHhhhhcceEEcCCC-cEEEEe-ccceEEE
Confidence 22233333211100 00000000 000000000001111223578889999999 566553 4478999
Q ss_pred EECCCC
Q psy4579 328 FDYTKH 333 (368)
Q Consensus 328 wd~~~~ 333 (368)
||++..
T Consensus 306 wDvnm~ 311 (460)
T COG5170 306 WDVNMA 311 (460)
T ss_pred Eecccc
Confidence 999864
|
|
| >PRK04043 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.22 E-value=4.9e-05 Score=69.56 Aligned_cols=164 Identities=9% Similarity=0.081 Sum_probs=85.7
Q ss_pred hhhhhhhcCcchheeecccccccCceeeEecCCccc-ccCCCCc-cccccCcceeeeccccC--CCCCcEEEEEEecCCC
Q psy4579 19 EYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTS-VQLPNED-AQFDASNYDTDKGTHTS--DEQNHLLIASVQLPNE 94 (368)
Q Consensus 19 ~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-l~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~i~~~~~~~~ 94 (368)
.+.+|-.+.---.....+.. . +.++-.|+|||++ +++.+.+ +.-.++.+++..|.... ..... .....|.++
T Consensus 168 ~~~l~~~d~dg~~~~~~~~~-~-~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt~~~g~--~~~~~~SPD 243 (419)
T PRK04043 168 KSNIVLADYTLTYQKVIVKG-G-LNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEKIASSQGM--LVVSDVSKD 243 (419)
T ss_pred cceEEEECCCCCceeEEccC-C-CeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEEEecCCCc--EEeeEECCC
Confidence 45556555433333333332 3 7889999999996 6654444 34456777766553322 12211 222335544
Q ss_pred ccccccCCcccCCCCcccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCCC--cEEEEeCCCCCCCCcccccce
Q psy4579 95 DAQFDASNYDTDKGGNVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDH--TICLWDINATPKENRVIDAKT 172 (368)
Q Consensus 95 ~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg--~v~iwd~~~~~~~~~~~~~~~ 172 (368)
+..+.... ...++..|.+++.++.....+..+........|+|+|..++++....| .|.+.|+.++.. .
T Consensus 244 G~~la~~~-~~~g~~~Iy~~dl~~g~~~~LT~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~--------~ 314 (419)
T PRK04043 244 GSKLLLTM-APKGQPDIYLYDTNTKTLTQITNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSV--------E 314 (419)
T ss_pred CCEEEEEE-ccCCCcEEEEEECCCCcEEEcccCCCccCccEECCCCCEEEEEECCCCCceEEEEECCCCCe--------E
Confidence 44433221 113355676777665544444444443455689999944444443444 566777766532 1
Q ss_pred eeeccccceecceeeEEeCCCCCeEEEee
Q psy4579 173 IFTGHTAVVEVRYGLSWNPSLNGYLLSAS 201 (368)
Q Consensus 173 ~~~~h~~~v~~~~~i~~~p~~~~~l~s~s 201 (368)
.+... +.. ...|+|+ +..|+-.+
T Consensus 315 rlt~~-g~~----~~~~SPD-G~~Ia~~~ 337 (419)
T PRK04043 315 QVVFH-GKN----NSSVSTY-KNYIVYSS 337 (419)
T ss_pred eCccC-CCc----CceECCC-CCEEEEEE
Confidence 11111 111 3489998 67666554
|
|
| >COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown] | Back alignment and domain information |
|---|
Probab=98.18 E-value=0.00012 Score=64.82 Aligned_cols=144 Identities=12% Similarity=0.155 Sum_probs=95.4
Q ss_pred CcccccCCCCccccccCcceeeeccccCCCCCcEEEEEEecCCCccccccCCcccCCCC-cccCCCCCeeeeeccccCCC
Q psy4579 51 DVTSVQLPNEDAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGG-NVQLPNEDAQFDASNYDTDK 129 (368)
Q Consensus 51 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g-~i~i~~~~~~~~~~~~~h~~ 129 (368)
+|+++++.|....+....|.... ....+.. .|.-..+.......... ..|| .+-+++.++..+.....--+
T Consensus 331 ~Gd~ia~VSRGkaFi~~~~~~~~--iqv~~~~--~VrY~r~~~~~e~~vig----t~dgD~l~iyd~~~~e~kr~e~~lg 402 (668)
T COG4946 331 NGDYIALVSRGKAFIMRPWDGYS--IQVGKKG--GVRYRRIQVDPEGDVIG----TNDGDKLGIYDKDGGEVKRIEKDLG 402 (668)
T ss_pred CCcEEEEEecCcEEEECCCCCee--EEcCCCC--ceEEEEEccCCcceEEe----ccCCceEEEEecCCceEEEeeCCcc
Confidence 47777776666655444443221 1111111 13223332222222222 2466 78899999888777777778
Q ss_pred CceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCC----c
Q psy4579 130 GGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDH----T 205 (368)
Q Consensus 130 ~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg----~ 205 (368)
.|.+++.+|+| ++++.+.....+.+.|++++.. ...-+...+-|+ .+.|||+ +.++|-+--+| .
T Consensus 403 ~I~av~vs~dG-K~~vvaNdr~el~vididngnv-------~~idkS~~~lIt---df~~~~n-sr~iAYafP~gy~tq~ 470 (668)
T COG4946 403 NIEAVKVSPDG-KKVVVANDRFELWVIDIDNGNV-------RLIDKSEYGLIT---DFDWHPN-SRWIAYAFPEGYYTQS 470 (668)
T ss_pred ceEEEEEcCCC-cEEEEEcCceEEEEEEecCCCe-------eEecccccceeE---EEEEcCC-ceeEEEecCcceeeee
Confidence 99999999999 8999999889999999998852 233334445564 9999998 89988876655 6
Q ss_pred EEEEECCCC
Q psy4579 206 ICLWDINAT 214 (368)
Q Consensus 206 i~iwd~~~~ 214 (368)
|+++|+.++
T Consensus 471 Iklydm~~~ 479 (668)
T COG4946 471 IKLYDMDGG 479 (668)
T ss_pred EEEEecCCC
Confidence 899999875
|
|
| >COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.15 E-value=4.9e-05 Score=67.60 Aligned_cols=260 Identities=11% Similarity=0.126 Sum_probs=133.8
Q ss_pred hhhhhhhcCcchhe---eecccccccCceeeEecCCcccccCCCCccccccCcceeeeccccCC-CC--CcEEEEEEecC
Q psy4579 19 EYKIWKKNTPFLYD---LVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSD-EQ--NHLLIASVQLP 92 (368)
Q Consensus 19 ~~~~w~~~~~~~~~---~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~i~~~~~~ 92 (368)
...+|+--...+.. .+....+.||+ ++|+-+..++|--..+. + ..+++ ++..... .. ...-|....+.
T Consensus 109 ~~~vwd~~sg~iv~sf~~~~q~~~~Wp~--~k~s~~D~y~ARvv~~s-l--~i~e~-t~n~~~~p~~~lr~~gi~dFsis 182 (561)
T COG5354 109 NVFVWDIASGMIVFSFNGISQPYLGWPV--LKFSIDDKYVARVVGSS-L--YIHEI-TDNIEEHPFKNLRPVGILDFSIS 182 (561)
T ss_pred ceeEEeccCceeEeeccccCCcccccce--eeeeecchhhhhhccCe-E--EEEec-CCccccCchhhccccceeeEEec
Confidence 35567666654333 33334567998 69998888766542221 2 22332 1111100 00 01224444554
Q ss_pred CCccccccCCccc---CCCCcccCCCCCeeeeecccc-CCCCceeeEecCCCCCeeEEEe-----------CCCcEEEEe
Q psy4579 93 NEDAQFDASNYDT---DKGGNVQLPNEDAQFDASNYD-TDKGGYGLSWNPSLNGYLLSAS-----------DDHTICLWD 157 (368)
Q Consensus 93 ~~~~~~~~~~~~~---~~~g~i~i~~~~~~~~~~~~~-h~~~v~~l~~sp~~~~~lasg~-----------~dg~v~iwd 157 (368)
+.......+-|.+ ...+++.+|.+.......... .+..=..+.|++.| ++|+.-- ...++.|++
T Consensus 183 P~~n~~~la~~tPEk~~kpa~~~i~sIp~~s~l~tk~lfk~~~~qLkW~~~g-~~ll~l~~t~~ksnKsyfgesnLyl~~ 261 (561)
T COG5354 183 PEGNHDELAYWTPEKLNKPAMVRILSIPKNSVLVTKNLFKVSGVQLKWQVLG-KYLLVLVMTHTKSNKSYFGESNLYLLR 261 (561)
T ss_pred CCCCCceEEEEccccCCCCcEEEEEEccCCCeeeeeeeEeecccEEEEecCC-ceEEEEEEEeeecccceeccceEEEEe
Confidence 4322222122222 356778888776433222221 12233458899988 5544321 124577777
Q ss_pred CCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEE--eeCCCcEEEEECCCCCCCCccccceeeeecccccEe
Q psy4579 158 INATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLS--ASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVE 235 (368)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s--~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~ 235 (368)
+.... +....+-.++|. ..+|.|. ++.+++ |-.+-.+.++|++.. + .+......-+
T Consensus 262 ~~e~~--------i~V~~~~~~pVh---df~W~p~-S~~F~vi~g~~pa~~s~~~lr~N---------l-~~~~Pe~~rN 319 (561)
T COG5354 262 ITERS--------IPVEKDLKDPVH---DFTWEPL-SSRFAVISGYMPASVSVFDLRGN---------L-RFYFPEQKRN 319 (561)
T ss_pred ecccc--------cceeccccccce---eeeeccc-CCceeEEecccccceeecccccc---------e-EEecCCcccc
Confidence 76432 233335678884 9999998 555444 457889999999875 1 1222233334
Q ss_pred EEEEeeecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcE
Q psy4579 236 DYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCV 315 (368)
Q Consensus 236 ~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~ 315 (368)
.+.|+| ..+.+.+..+|...|.+.+++............+ ....-+.|+|+++.+
T Consensus 320 T~~fsp-----------------------~~r~il~agF~nl~gni~i~~~~~rf~~~~~~~~--~n~s~~~wspd~qF~ 374 (561)
T COG5354 320 TIFFSP-----------------------HERYILFAGFDNLQGNIEIFDPAGRFKVAGAFNG--LNTSYCDWSPDGQFY 374 (561)
T ss_pred cccccC-----------------------cccEEEEecCCccccceEEeccCCceEEEEEeec--CCceEeeccCCceEE
Confidence 445544 1122222334444454555554444333322111 223457899999655
Q ss_pred EEEec-----CCCeEEEEECCC
Q psy4579 316 IATKT-----PSSDVLVFDYTK 332 (368)
Q Consensus 316 lasgs-----~Dg~i~iwd~~~ 332 (368)
..... .|..|+|||+..
T Consensus 375 ~~~~ts~k~~~Dn~i~l~~v~g 396 (561)
T COG5354 375 DTDTTSEKLRVDNSIKLWDVYG 396 (561)
T ss_pred EecCCCcccccCcceEEEEecC
Confidence 43322 378899999974
|
|
| >KOG1645|consensus | Back alignment and domain information |
|---|
Probab=98.14 E-value=4.4e-05 Score=65.94 Aligned_cols=82 Identities=12% Similarity=0.174 Sum_probs=68.6
Q ss_pred ccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeC
Q psy4579 123 SNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASD 202 (368)
Q Consensus 123 ~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~ 202 (368)
-+-.|...|..++|+|..+.++..++.+..|+|.|+++.. ....+..| ..+ |+++|.-++.++|+.|-.
T Consensus 188 ~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~-------~vssy~a~-~~~---wSC~wDlde~h~IYaGl~ 256 (463)
T KOG1645|consen 188 ILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSC-------VVSSYIAY-NQI---WSCCWDLDERHVIYAGLQ 256 (463)
T ss_pred cccccchhhhhhccCccccceeeeeccCceEEEEecccce-------eeeheecc-CCc---eeeeeccCCcceeEEecc
Confidence 3445788999999999985589999999999999999863 34556666 455 699999988889999999
Q ss_pred CCcEEEEECCCCC
Q psy4579 203 DHTICLWDINATP 215 (368)
Q Consensus 203 dg~i~iwd~~~~~ 215 (368)
.|.|.+||++...
T Consensus 257 nG~VlvyD~R~~~ 269 (463)
T KOG1645|consen 257 NGMVLVYDMRQPE 269 (463)
T ss_pred CceEEEEEccCCC
Confidence 9999999999864
|
|
| >PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3 | Back alignment and domain information |
|---|
Probab=98.09 E-value=4.5e-05 Score=68.30 Aligned_cols=254 Identities=15% Similarity=0.225 Sum_probs=121.7
Q ss_pred cccCceeeEecCCcccccCCCCc----cccccCcceeee--ccccC--CCC-CcEEEEEEecCCCccccccCCcccCCCC
Q psy4579 39 LEWPSLTAQWLPDVTSVQLPNED----AQFDASNYDTDK--GTHTS--DEQ-NHLLIASVQLPNEDAQFDASNYDTDKGG 109 (368)
Q Consensus 39 ~~~~~~~~~~~p~~~~l~~~~~~----~~~~~~~~~~~~--~~~~~--~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~g 109 (368)
...|.- +.++|++++|-+..+. +.+ ..|++.. |+... ... .-..-..+.+.+....+..+.|. +|
T Consensus 36 ~~~Ps~-l~~~~~~~~LY~~~e~~~~~g~v--~~~~i~~~~g~L~~~~~~~~~g~~p~~i~~~~~g~~l~vany~---~g 109 (345)
T PF10282_consen 36 GENPSW-LAVSPDGRRLYVVNEGSGDSGGV--SSYRIDPDTGTLTLLNSVPSGGSSPCHIAVDPDGRFLYVANYG---GG 109 (345)
T ss_dssp SSSECC-EEE-TTSSEEEEEETTSSTTTEE--EEEEEETTTTEEEEEEEEEESSSCEEEEEECTTSSEEEEEETT---TT
T ss_pred CCCCce-EEEEeCCCEEEEEEccccCCCCE--EEEEECCCcceeEEeeeeccCCCCcEEEEEecCCCEEEEEEcc---CC
Confidence 344444 8899999987776553 444 3344332 21111 000 00011223344445555555554 67
Q ss_pred cccCCCCCe--eeeec--cc-----------cCCCCceeeEecCCCCCeeEEE-eCCCcEEEEeCCCCCCCCccccccee
Q psy4579 110 NVQLPNEDA--QFDAS--NY-----------DTDKGGYGLSWNPSLNGYLLSA-SDDHTICLWDINATPKENRVIDAKTI 173 (368)
Q Consensus 110 ~i~i~~~~~--~~~~~--~~-----------~h~~~v~~l~~sp~~~~~lasg-~~dg~v~iwd~~~~~~~~~~~~~~~~ 173 (368)
.+.+++++. ..... .. .......++.|+|++ +++++. -....|.+|++...... +.....
T Consensus 110 ~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg-~~v~v~dlG~D~v~~~~~~~~~~~---l~~~~~ 185 (345)
T PF10282_consen 110 SVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDG-RFVYVPDLGADRVYVYDIDDDTGK---LTPVDS 185 (345)
T ss_dssp EEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTS-SEEEEEETTTTEEEEEEE-TTS-T---EEEEEE
T ss_pred eEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCC-CEEEEEecCCCEEEEEEEeCCCce---EEEeec
Confidence 787776542 22111 11 123456789999999 655554 44568999999765421 111122
Q ss_pred --eeccccceecceeeEEeCCCCCeE-EEeeCCCcEEEEECCCCCCCCccccceeeeec-c--cccEeEEEEeeeccccc
Q psy4579 174 --FTGHTAVVEVRYGLSWNPSLNGYL-LSASDDHTICLWDINATPKENRVIDAKTIFTG-H--TAVVEDYSIHRLILGTH 247 (368)
Q Consensus 174 --~~~h~~~v~~~~~i~~~p~~~~~l-~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~-~--~~~v~~v~~~~~~~~~~ 247 (368)
+..-.++ + .+.|+|+ +.++ ++.-.+++|.++++...............+.. . ......+.++|
T Consensus 186 ~~~~~G~GP-R---h~~f~pd-g~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~isp------ 254 (345)
T PF10282_consen 186 IKVPPGSGP-R---HLAFSPD-GKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPEGFTGENAPAEIAISP------ 254 (345)
T ss_dssp EECSTTSSE-E---EEEE-TT-SSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCETTSCSSSSEEEEEE-T------
T ss_pred cccccCCCC-c---EEEEcCC-cCEEEEecCCCCcEEEEeecccCCceeEEEEeeeccccccccCCceeEEEec------
Confidence 2222333 3 8999998 6654 55567889999998733211111111111110 0 11233444443
Q ss_pred CCCCccceEEEEeecCCcccccccccccCCCCCcccccC--CCCceeeeeec-CcccceeEEEEeCCCCcEEEEecCCCe
Q psy4579 248 TSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGS--VSGKIEIEIKI-NHEGEVNRARYMPQNPCVIATKTPSSD 324 (368)
Q Consensus 248 ~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~--~~~~~~~~~~~-~h~~~i~~~~~~p~~~~~lasgs~Dg~ 324 (368)
...++++.... ...+..+++ .++.+...... ..-.....++++|+|..++++...++.
T Consensus 255 ---dg~~lyvsnr~----------------~~sI~vf~~d~~~g~l~~~~~~~~~G~~Pr~~~~s~~g~~l~Va~~~s~~ 315 (345)
T PF10282_consen 255 ---DGRFLYVSNRG----------------SNSISVFDLDPATGTLTLVQTVPTGGKFPRHFAFSPDGRYLYVANQDSNT 315 (345)
T ss_dssp ---TSSEEEEEECT----------------TTEEEEEEECTTTTTEEEEEEEEESSSSEEEEEE-TTSSEEEEEETTTTE
T ss_pred ---CCCEEEEEecc----------------CCEEEEEEEecCCCceEEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCe
Confidence 01122222110 111222222 12332221111 112336889999999878877778899
Q ss_pred EEEEECCC
Q psy4579 325 VLVFDYTK 332 (368)
Q Consensus 325 i~iwd~~~ 332 (368)
|.+|++..
T Consensus 316 v~vf~~d~ 323 (345)
T PF10282_consen 316 VSVFDIDP 323 (345)
T ss_dssp EEEEEEET
T ss_pred EEEEEEeC
Confidence 99999863
|
1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H. |
| >PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A | Back alignment and domain information |
|---|
Probab=98.07 E-value=2.7e-05 Score=69.96 Aligned_cols=268 Identities=13% Similarity=0.143 Sum_probs=126.8
Q ss_pred ceeeEecCCcccccCCCCccccccCcceeeeccccCCCCCcEEEEEEecCCCccccccCCcccCCCCcccCCCCCeeeee
Q psy4579 43 SLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQFDA 122 (368)
Q Consensus 43 ~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~ 122 (368)
...+.++||++++.+.+.||.+ ..+++..+......+--.....+.+..++..+.++.|. .+.+.++|.......
T Consensus 39 h~~~~~s~Dgr~~yv~~rdg~v--sviD~~~~~~v~~i~~G~~~~~i~~s~DG~~~~v~n~~---~~~v~v~D~~tle~v 113 (369)
T PF02239_consen 39 HAGLKFSPDGRYLYVANRDGTV--SVIDLATGKVVATIKVGGNPRGIAVSPDGKYVYVANYE---PGTVSVIDAETLEPV 113 (369)
T ss_dssp EEEEE-TT-SSEEEEEETTSEE--EEEETTSSSEEEEEE-SSEEEEEEE--TTTEEEEEEEE---TTEEEEEETTT--EE
T ss_pred eeEEEecCCCCEEEEEcCCCeE--EEEECCcccEEEEEecCCCcceEEEcCCCCEEEEEecC---CCceeEeccccccce
Confidence 3457899999998888888877 44455444333221111123345555555555555544 678888886543222
Q ss_pred ccc---c-----CCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCC
Q psy4579 123 SNY---D-----TDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLN 194 (368)
Q Consensus 123 ~~~---~-----h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~ 194 (368)
... + ....+.++..+|..+.++++--.-+.|.+-|....... ....+. -.... ....|.|+ +
T Consensus 114 ~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d~~~~-----~~~~i~-~g~~~---~D~~~dpd-g 183 (369)
T PF02239_consen 114 KTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSDPKNL-----KVTTIK-VGRFP---HDGGFDPD-G 183 (369)
T ss_dssp EEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETTTSSCE-----EEEEEE---TTE---EEEEE-TT-S
T ss_pred eecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEecccccc-----ceeeec-ccccc---cccccCcc-c
Confidence 211 1 23467788888887334444444588877787664210 112222 22223 38899998 7
Q ss_pred CeEEE-eeCCCcEEEEECCCCCCCCccccceeeee----ccccc-----------EeEEEEeee----cccccCCC---C
Q psy4579 195 GYLLS-ASDDHTICLWDINATPKENRVIDAKTIFT----GHTAV-----------VEDYSIHRL----ILGTHTSD---E 251 (368)
Q Consensus 195 ~~l~s-~s~dg~i~iwd~~~~~~~~~~~~~~~~~~----~~~~~-----------v~~v~~~~~----~~~~~~~d---~ 251 (368)
.+++. ...+..|-++|..++... ..+. .|..+ ++...-... .++...-. .
T Consensus 184 ry~~va~~~sn~i~viD~~~~k~v-------~~i~~g~~p~~~~~~~~php~~g~vw~~~~~~~~~~~~ig~~~v~v~d~ 256 (369)
T PF02239_consen 184 RYFLVAANGSNKIAVIDTKTGKLV-------ALIDTGKKPHPGPGANFPHPGFGPVWATSGLGYFAIPLIGTDPVSVHDD 256 (369)
T ss_dssp SEEEEEEGGGTEEEEEETTTTEEE-------EEEE-SSSBEETTEEEEEETTTEEEEEEEBSSSSEEEEEE--TTT-STT
T ss_pred ceeeecccccceeEEEeeccceEE-------EEeeccccccccccccccCCCcceEEeeccccceecccccCCccccchh
Confidence 76544 566778999998775321 1110 12111 111110000 01110000 0
Q ss_pred ccceEEEEeec---------CCcccccccc-cccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecC
Q psy4579 252 QNHLLIASVQL---------PNEDAQFDAS-NYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTP 321 (368)
Q Consensus 252 ~~~~~~~~~~~---------~~~~~~~~~~-~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~ 321 (368)
...-.+..+.. .++.+.+.+. ........+.++|..+.+....+..+-...+..+.|+++|..+.+|.-.
T Consensus 257 ~~wkvv~~I~~~G~glFi~thP~s~~vwvd~~~~~~~~~v~viD~~tl~~~~~i~~~~~~~~~h~ef~~dG~~v~vS~~~ 336 (369)
T PF02239_consen 257 YAWKVVKTIPTQGGGLFIKTHPDSRYVWVDTFLNPDADTVQVIDKKTLKVVKTITPGPGKRVVHMEFNPDGKEVWVSVWD 336 (369)
T ss_dssp TBTSEEEEEE-SSSS--EE--TT-SEEEEE-TT-SSHT-EEEEECCGTEEEE-HHHHHT--EEEEEE-TTSSEEEEEEE-
T ss_pred hcCeEEEEEECCCCcceeecCCCCccEEeeccCCCCCceEEEEECcCcceeEEEeccCCCcEeccEECCCCCEEEEEEec
Confidence 00001111111 1111111111 2223344566677766665555542223358999999999887777655
Q ss_pred CC-eEEEEECCC
Q psy4579 322 SS-DVLVFDYTK 332 (368)
Q Consensus 322 Dg-~i~iwd~~~ 332 (368)
++ .|.++|-.+
T Consensus 337 ~~~~i~v~D~~T 348 (369)
T PF02239_consen 337 GNGAIVVYDAKT 348 (369)
T ss_dssp -TTEEEEEETTT
T ss_pred CCCEEEEEECCC
Confidence 44 899999876
|
... |
| >KOG0882|consensus | Back alignment and domain information |
|---|
Probab=98.06 E-value=4.3e-05 Score=66.97 Aligned_cols=200 Identities=12% Similarity=0.007 Sum_probs=119.5
Q ss_pred CCCcccCCCCCe----eeeeccccCCCCceeeEecCCCCCeeEEEeC-CCcEEEEeCCCCCCCCcccccceeeeccccce
Q psy4579 107 KGGNVQLPNEDA----QFDASNYDTDKGGYGLSWNPSLNGYLLSASD-DHTICLWDINATPKENRVIDAKTIFTGHTAVV 181 (368)
Q Consensus 107 ~~g~i~i~~~~~----~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~-dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v 181 (368)
-||.++.|.... .++..+..|...|.+++.+-++ .++.|++. |..++++|+++.... ....+..-.+.+
T Consensus 28 lDGh~KFWkKs~isGvEfVKhFraHL~~I~sl~~S~dg-~L~~Sv~d~Dhs~KvfDvEn~Dmi-----nmiKL~~lPg~a 101 (558)
T KOG0882|consen 28 LDGHKKFWKKSRISGVEFVKHFRAHLGVILSLAVSYDG-WLFRSVEDPDHSVKVFDVENFDMI-----NMIKLVDLPGFA 101 (558)
T ss_pred cchhhhhcCCCCccceeehhhhHHHHHHHHhhhccccc-eeEeeccCcccceeEEEeeccchh-----hhcccccCCCce
Confidence 389999998764 4566677899999999999998 89999887 999999999876421 011222222222
Q ss_pred ecceeeEEeCCCC--CeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeeec--ccccCCCCccceEE
Q psy4579 182 EVRYGLSWNPSLN--GYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLI--LGTHTSDEQNHLLI 257 (368)
Q Consensus 182 ~~~~~i~~~p~~~--~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~--~~~~~~d~~~~~~~ 257 (368)
++..+|.+. .+.++.-.+|.+.++|-+....+ ....-.-|..+|..+.+++.. +.+....+.+..|-
T Consensus 102 ----~wv~skGd~~s~IAVs~~~sg~i~VvD~~~d~~q-----~~~fkklH~sPV~~i~y~qa~Ds~vSiD~~gmVEyWs 172 (558)
T KOG0882|consen 102 ----EWVTSKGDKISLIAVSLFKSGKIFVVDGFGDFCQ-----DGYFKKLHFSPVKKIRYNQAGDSAVSIDISGMVEYWS 172 (558)
T ss_pred ----EEecCCCCeeeeEEeecccCCCcEEECCcCCcCc-----cceecccccCceEEEEeeccccceeeccccceeEeec
Confidence 333333211 23333456889999998776421 122233488899988887632 22222223333332
Q ss_pred EEee--cCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCC
Q psy4579 258 ASVQ--LPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPS 335 (368)
Q Consensus 258 ~~~~--~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~ 335 (368)
.... ++.... .|.+....-...+. .......++.|+|++ .-+++-+.|..|++++.+....
T Consensus 173 ~e~~~qfPr~~l---------------~~~~K~eTdLy~f~-K~Kt~pts~Efsp~g-~qistl~~DrkVR~F~~KtGkl 235 (558)
T KOG0882|consen 173 AEGPFQFPRTNL---------------NFELKHETDLYGFP-KAKTEPTSFEFSPDG-AQISTLNPDRKVRGFVFKTGKL 235 (558)
T ss_pred CCCcccCccccc---------------cccccccchhhccc-ccccCccceEEcccc-CcccccCcccEEEEEEeccchh
Confidence 2210 111000 01111111122222 345567899999999 5677888999999999987665
Q ss_pred CCC
Q psy4579 336 KPD 338 (368)
Q Consensus 336 ~~~ 338 (368)
.+.
T Consensus 236 vqe 238 (558)
T KOG0882|consen 236 VQE 238 (558)
T ss_pred hhh
Confidence 443
|
|
| >KOG4714|consensus | Back alignment and domain information |
|---|
Probab=98.03 E-value=1.4e-05 Score=65.06 Aligned_cols=55 Identities=16% Similarity=0.053 Sum_probs=48.2
Q ss_pred ceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeecccCceeeecceeee
Q psy4579 302 EVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 302 ~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p~~ 365 (368)
.|.+++-+|..+++++.|+.||.+.+||.+.. ..|...+..|+.+++-+-|+|..
T Consensus 181 ~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~---------~~p~S~l~ahk~~i~eV~FHpk~ 235 (319)
T KOG4714|consen 181 AVTALCSHPAQQHLVCCGTDDGIVGLWDARNV---------AMPVSLLKAHKAEIWEVHFHPKN 235 (319)
T ss_pred cchhhhCCcccccEEEEecCCCeEEEEEcccc---------cchHHHHHHhhhhhhheeccCCC
Confidence 49999999998899999999999999999862 45666788999999999999865
|
|
| >KOG1275|consensus | Back alignment and domain information |
|---|
Probab=98.01 E-value=7.4e-05 Score=71.05 Aligned_cols=152 Identities=11% Similarity=0.127 Sum_probs=92.0
Q ss_pred CceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeC-------
Q psy4579 130 GGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASD------- 202 (368)
Q Consensus 130 ~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~------- 202 (368)
.|.-++.+ + +.+.+|...|+|.+-|.++.+ .++++.+|++.+. +++. . +++|++||.
T Consensus 179 ~v~imR~N--n-r~lf~G~t~G~V~LrD~~s~~-------~iht~~aHs~siS---DfDv--~-GNlLitCG~S~R~~~l 242 (1118)
T KOG1275|consen 179 GVTIMRYN--N-RNLFCGDTRGTVFLRDPNSFE-------TIHTFDAHSGSIS---DFDV--Q-GNLLITCGYSMRRYNL 242 (1118)
T ss_pred ceEEEEec--C-cEEEeecccceEEeecCCcCc-------eeeeeecccccee---eeec--c-CCeEEEeecccccccc
Confidence 35555544 3 889999999999999998864 6799999999985 5544 4 889999985
Q ss_pred --CCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeeecc---cccCCCCccceEEEEeecCCcccccccccccCC
Q psy4579 203 --DHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLIL---GTHTSDEQNHLLIASVQLPNEDAQFDASNYDTD 277 (368)
Q Consensus 203 --dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~---~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~ 277 (368)
|.-|+|||+|..... .|+. -+..+ .-+.|+|.+. +..+..++..+. +...+.
T Consensus 243 ~~D~FvkVYDLRmmral----~PI~---~~~~P-~flrf~Psl~t~~~V~S~sGq~q~v-------------d~~~ls-- 299 (1118)
T KOG1275|consen 243 AMDPFVKVYDLRMMRAL----SPIQ---FPYGP-QFLRFHPSLTTRLAVTSQSGQFQFV-------------DTATLS-- 299 (1118)
T ss_pred cccchhhhhhhhhhhcc----CCcc---cccCc-hhhhhcccccceEEEEecccceeec-------------cccccC--
Confidence 667899999986322 1221 11111 2234444211 111111111111 000010
Q ss_pred CCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECC
Q psy4579 278 KGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYT 331 (368)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~ 331 (368)
.......+.......+..+.+++++ ..+|.|..+|.|.+|--+
T Consensus 300 ----------NP~~~~~~v~p~~s~i~~fDiSsn~-~alafgd~~g~v~~wa~~ 342 (1118)
T KOG1275|consen 300 ----------NPPAGVKMVNPNGSGISAFDISSNG-DALAFGDHEGHVNLWADR 342 (1118)
T ss_pred ----------CCccceeEEccCCCcceeEEecCCC-ceEEEecccCcEeeecCC
Confidence 0001111111334458999999999 799999999999999844
|
|
| >KOG1008|consensus | Back alignment and domain information |
|---|
Probab=97.92 E-value=1.2e-05 Score=73.47 Aligned_cols=153 Identities=14% Similarity=0.219 Sum_probs=91.5
Q ss_pred ceeeEecCCcc--cccCCCCccccccCcceeeeccccCC----CCCcEEEEEEecCCCccccccCCccc-CCCCcccCCC
Q psy4579 43 SLTAQWLPDVT--SVQLPNEDAQFDASNYDTDKGTHTSD----EQNHLLIASVQLPNEDAQFDASNYDT-DKGGNVQLPN 115 (368)
Q Consensus 43 ~~~~~~~p~~~--~l~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~g~i~i~~ 115 (368)
+.|++|.-+.+ .+++|..+|.|.+...+- +|.+. .....+=.++.|.+-+....+++.+. ..+-.+.||+
T Consensus 59 ~kcva~~y~~d~cIlavG~atG~I~l~s~r~---~hdSs~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwd 135 (783)
T KOG1008|consen 59 VKCVASFYGNDRCILAVGSATGNISLLSVRH---PHDSSAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWD 135 (783)
T ss_pred ceeehhhcCCchhhhhhccccCceEEeecCC---cccccceecccccccccccccccccHHHHHhhhhhhcccCCcccee
Confidence 45677766655 577788888875443321 22221 11111223444544455555555543 4577899999
Q ss_pred CCeeee-----ecccc-CCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEE
Q psy4579 116 EDAQFD-----ASNYD-TDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSW 189 (368)
Q Consensus 116 ~~~~~~-----~~~~~-h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~ 189 (368)
+..... ..+.. ......+++|-.+. +++.+|.....+.++|++..- ...-.-.+..+. .+..
T Consensus 136 i~s~ltvPke~~~fs~~~l~gqns~cwlrd~-klvlaGm~sr~~~ifdlRqs~--------~~~~svnTk~vq---G~tV 203 (783)
T KOG1008|consen 136 INSLLTVPKESPLFSSSTLDGQNSVCWLRDT-KLVLAGMTSRSVHIFDLRQSL--------DSVSSVNTKYVQ---GITV 203 (783)
T ss_pred cccccCCCccccccccccccCccccccccCc-chhhcccccchhhhhhhhhhh--------hhhhhhhhhhcc---ccee
Confidence 865421 11222 34456688898776 889999999999999998431 111112233343 5666
Q ss_pred eCCCCCeEEEeeCCCcEEEEEC
Q psy4579 190 NPSLNGYLLSASDDHTICLWDI 211 (368)
Q Consensus 190 ~p~~~~~l~s~s~dg~i~iwd~ 211 (368)
.|-..+++++.+ ||.|-+||.
T Consensus 204 dp~~~nY~cs~~-dg~iAiwD~ 224 (783)
T KOG1008|consen 204 DPFSPNYFCSNS-DGDIAIWDT 224 (783)
T ss_pred cCCCCCceeccc-cCceeeccc
Confidence 774477887766 999999994
|
|
| >PRK04043 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=97.87 E-value=0.0014 Score=60.21 Aligned_cols=93 Identities=13% Similarity=0.122 Sum_probs=53.3
Q ss_pred cccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeC---CCcEEEEeCCCCCCCCcccccceeeeccccceeccee
Q psy4579 110 NVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASD---DHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYG 186 (368)
Q Consensus 110 ~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~---dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 186 (368)
.|.+-|.++.....+... +.+..-+|+|+|...++-.+. +..|.++|+.++.. ..+....+... .
T Consensus 170 ~l~~~d~dg~~~~~~~~~-~~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~--------~~lt~~~g~~~---~ 237 (419)
T PRK04043 170 NIVLADYTLTYQKVIVKG-GLNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKK--------EKIASSQGMLV---V 237 (419)
T ss_pred eEEEECCCCCceeEEccC-CCeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcE--------EEEecCCCcEE---e
Confidence 344445554332222222 367789999999333554443 35688889877642 33333334342 6
Q ss_pred eEEeCCCCCeEEEeeCCC--cEEEEECCCC
Q psy4579 187 LSWNPSLNGYLLSASDDH--TICLWDINAT 214 (368)
Q Consensus 187 i~~~p~~~~~l~s~s~dg--~i~iwd~~~~ 214 (368)
..|+|++..++++.+.++ .|.++|+.++
T Consensus 238 ~~~SPDG~~la~~~~~~g~~~Iy~~dl~~g 267 (419)
T PRK04043 238 SDVSKDGSKLLLTMAPKGQPDIYLYDTNTK 267 (419)
T ss_pred eEECCCCCEEEEEEccCCCcEEEEEECCCC
Confidence 789999334555555454 5777787665
|
|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=97.81 E-value=0.0012 Score=67.45 Aligned_cols=75 Identities=17% Similarity=0.397 Sum_probs=50.2
Q ss_pred eeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeec---------ccc---ceecceeeEEeCCCCCeEEE
Q psy4579 132 YGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTG---------HTA---VVEVRYGLSWNPSLNGYLLS 199 (368)
Q Consensus 132 ~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~---------h~~---~v~~~~~i~~~p~~~~~l~s 199 (368)
..++++|++..++++.+.++.|++||..++.. ..+.+ +.. ....+..|+++|++..++++
T Consensus 686 ~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~v--------~~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVA 757 (1057)
T PLN02919 686 WDVCFEPVNEKVYIAMAGQHQIWEYNISDGVT--------RVFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIA 757 (1057)
T ss_pred eEEEEecCCCeEEEEECCCCeEEEEECCCCeE--------EEEecCCccccCCCCccccccccCccEEEEeCCCCEEEEE
Confidence 57899995437788888899999999876531 11111 100 00011379999983336677
Q ss_pred eeCCCcEEEEECCCC
Q psy4579 200 ASDDHTICLWDINAT 214 (368)
Q Consensus 200 ~s~dg~i~iwd~~~~ 214 (368)
-+.++.|++||+.++
T Consensus 758 Ds~n~~Irv~D~~tg 772 (1057)
T PLN02919 758 DSESSSIRALDLKTG 772 (1057)
T ss_pred ECCCCeEEEEECCCC
Confidence 778899999999865
|
|
| >KOG2315|consensus | Back alignment and domain information |
|---|
Probab=97.80 E-value=0.0019 Score=58.52 Aligned_cols=279 Identities=9% Similarity=0.102 Sum_probs=141.8
Q ss_pred ccccccCceeeEecCCcccccCCCCccccccCcceeeeccccCCCCCcEEEEEEecCCCccccccC-Cccc-----CCCC
Q psy4579 36 THALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDAS-NYDT-----DKGG 109 (368)
Q Consensus 36 ~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~-----~~~g 109 (368)
.+....|+..+.++++|+.+|++..+.. +++....+...-.. .......+.+.+.+..+..- .+.. .+.-
T Consensus 30 ~~~~~~~~~v~~~S~~G~lfA~~~~~~v---~i~~~~~~~~~lt~-~~~~~~~L~fSP~g~yL~T~e~~~i~~~~~~~~p 105 (566)
T KOG2315|consen 30 QNKTSRPCNVFAYSNNGRLFAYSDNQVV---KVFEIATLKVVLCV-ELKKTYDLLFSPKGNYLLTWEPWAIYGPKNASNP 105 (566)
T ss_pred cCCCCCcceeEEEcCCCcEEEEEcCCeE---EEEEccCCcEEEEe-ccceeeeeeecccccccccccccccccCCCCCCC
Confidence 3445678889999999999998766633 44444433211111 11134455554433322211 1111 1223
Q ss_pred cccCCCCCeeeeecccc-CCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeE
Q psy4579 110 NVQLPNEDAQFDASNYD-TDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLS 188 (368)
Q Consensus 110 ~i~i~~~~~~~~~~~~~-h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~ 188 (368)
.+++|+....+....+. ....-++..|+++. .|+.--..+.+.+|+....+. +... -|...++ .+.
T Consensus 106 n~~v~~vet~~~~s~~q~k~Q~~W~~qfs~dE--sl~arlv~nev~f~~~~~f~~------~~~k--l~~~~i~---~f~ 172 (566)
T KOG2315|consen 106 NVLVYNVETGVQRSQIQKKMQNGWVPQFSIDE--SLAARLVSNEVQFYDLGSFKT------IQHK--LSVSGIT---MLS 172 (566)
T ss_pred ceeeeeeccceehhheehhhhcCcccccccch--hhhhhhhcceEEEEecCCccc------eeee--eecccee---eEE
Confidence 46688877643333322 22222799999984 555556678999999987432 2233 3455564 778
Q ss_pred EeCC-CCCeEEE-----eeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeeecccccCCCCccceEEEEeec
Q psy4579 189 WNPS-LNGYLLS-----ASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQL 262 (368)
Q Consensus 189 ~~p~-~~~~l~s-----~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~ 262 (368)
++|. ...++|+ +|.=+.|+||.......... +....-|+. +. -.+.|++. ++.-+.+.+..+
T Consensus 173 lSpgp~~~~vAvyvPe~kGaPa~vri~~~~~~~~~~~-~a~ksFFka--dk-vqm~WN~~--------gt~LLvLastdV 240 (566)
T KOG2315|consen 173 LSPGPEPPFVAVYVPEKKGAPASVRIYKYPEEGQHQP-VANKSFFKA--DK-VQMKWNKL--------GTALLVLASTDV 240 (566)
T ss_pred ecCCCCCceEEEEccCCCCCCcEEEEeccccccccch-hhhcccccc--ce-eEEEeccC--------CceEEEEEEEee
Confidence 8886 2344444 35556899998763221111 011111111 11 23455531 112223333333
Q ss_pred CCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcE-EEEecCCCeEEEEECCCCCCCCCCCC
Q psy4579 263 PNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCV-IATKTPSSDVLVFDYTKHPSKPDPNG 341 (368)
Q Consensus 263 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~-lasgs~Dg~i~iwd~~~~~~~~~~~~ 341 (368)
+.....++- . ..+.+.+....+.... ....++|.++.|+|++..+ ++-|=+--.+.|+|++
T Consensus 241 Dktn~SYYG----E--q~Lyll~t~g~s~~V~--L~k~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr---------- 302 (566)
T KOG2315|consen 241 DKTNASYYG----E--QTLYLLATQGESVSVP--LLKEGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLR---------- 302 (566)
T ss_pred cCCCccccc----c--ceEEEEEecCceEEEe--cCCCCCceEEEECCCCCEEEEEEecccceEEEEcCC----------
Confidence 333222211 0 0122222221122222 2468999999999998433 3345567789999998
Q ss_pred CCCCceeeecccCceeeecceee
Q psy4579 342 ECHPDLRLRGHQKEGLIEGTYNC 364 (368)
Q Consensus 342 ~~~~~~~~~gh~~~V~~l~w~p~ 364 (368)
+.++..+ -+++=+++-|||+
T Consensus 303 -~~~v~df--~egpRN~~~fnp~ 322 (566)
T KOG2315|consen 303 -GKPVFDF--PEGPRNTAFFNPH 322 (566)
T ss_pred -CCEeEeC--CCCCccceEECCC
Confidence 4553333 2444455666654
|
|
| >PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.001 Score=60.79 Aligned_cols=149 Identities=13% Similarity=0.164 Sum_probs=90.3
Q ss_pred CCCceeeEecCCCCCeeEEE----eCCCc----EEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEE
Q psy4579 128 DKGGYGLSWNPSLNGYLLSA----SDDHT----ICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLS 199 (368)
Q Consensus 128 ~~~v~~l~~sp~~~~~lasg----~~dg~----v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s 199 (368)
+....++.||-..+..+.|. +.+|. -++|+....+.+.. .+..+ .....+. +++++|+ ...++.
T Consensus 205 E~dPl~~~Fs~~~~~qi~tVE~s~s~~g~~~~d~ciYE~~r~klqrv---svtsi-pL~s~v~---~ca~sp~-E~kLvl 276 (545)
T PF11768_consen 205 ENDPLDVEFSLNQPYQIHTVEQSISVKGEPSADSCIYECSRNKLQRV---SVTSI-PLPSQVI---CCARSPS-EDKLVL 276 (545)
T ss_pred cCCcEEEEccCCCCcEEEEEEEecCCCCCceeEEEEEEeecCceeEE---EEEEE-ecCCcce---EEecCcc-cceEEE
Confidence 34456778887555666654 23444 34566654321110 11222 2444554 9999999 899999
Q ss_pred eeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeeecccccCCCCccceEEEEeecCCcccccccccccCCCC
Q psy4579 200 ASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKG 279 (368)
Q Consensus 200 ~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 279 (368)
|+.||+|.+||...+. ..+.
T Consensus 277 GC~DgSiiLyD~~~~~---------t~~~--------------------------------------------------- 296 (545)
T PF11768_consen 277 GCEDGSIILYDTTRGV---------TLLA--------------------------------------------------- 296 (545)
T ss_pred EecCCeEEEEEcCCCe---------eeee---------------------------------------------------
Confidence 9999999999987651 1000
Q ss_pred CcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCC-CCCCCC--Cceeee---ccc
Q psy4579 280 DFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPD-PNGECH--PDLRLR---GHQ 353 (368)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~-~~~~~~--~~~~~~---gh~ 353 (368)
...-..+.++|||+| .+++.|+.-|.+.+||+.-....-. -..+.. ....+. .+.
T Consensus 297 ------------------ka~~~P~~iaWHp~g-ai~~V~s~qGelQ~FD~ALspi~~qLlsEd~~P~~~L~Ls~yf~~~ 357 (545)
T PF11768_consen 297 ------------------KAEFIPTLIAWHPDG-AIFVVGSEQGELQCFDMALSPIKMQLLSEDATPKSTLQLSKYFRVS 357 (545)
T ss_pred ------------------eecccceEEEEcCCC-cEEEEEcCCceEEEEEeecCccceeeccccCCCccEEeeehhccCc
Confidence 011225669999999 6888999999999999875432211 011122 222222 356
Q ss_pred Cceeeeccee
Q psy4579 354 KEGLIEGTYN 363 (368)
Q Consensus 354 ~~V~~l~w~p 363 (368)
...-.+.|+|
T Consensus 358 ~~L~~iqW~~ 367 (545)
T PF11768_consen 358 SSLVHIQWAP 367 (545)
T ss_pred chhheeEecc
Confidence 6677888883
|
|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.0045 Score=63.42 Aligned_cols=99 Identities=14% Similarity=0.280 Sum_probs=62.6
Q ss_pred CCCcccCCCCCeeeeecccc--C------------CCCceeeEecCCCCCee-EEEeCCCcEEEEeCCCCCCCCcccccc
Q psy4579 107 KGGNVQLPNEDAQFDASNYD--T------------DKGGYGLSWNPSLNGYL-LSASDDHTICLWDINATPKENRVIDAK 171 (368)
Q Consensus 107 ~~g~i~i~~~~~~~~~~~~~--h------------~~~v~~l~~sp~~~~~l-asg~~dg~v~iwd~~~~~~~~~~~~~~ 171 (368)
.++.|.+++.++.......+ . -..-..+++++++ +.| ++-...+.|+++|..++. +
T Consensus 588 ~n~rI~v~d~~G~~i~~ig~~g~~G~~dG~~~~a~f~~P~GIavd~~g-n~LYVaDt~n~~Ir~id~~~~~--------V 658 (1057)
T PLN02919 588 NHNRIVVTDLDGNFIVQIGSTGEEGLRDGSFEDATFNRPQGLAYNAKK-NLLYVADTENHALREIDFVNET--------V 658 (1057)
T ss_pred CCCeEEEEeCCCCEEEEEccCCCcCCCCCchhccccCCCcEEEEeCCC-CEEEEEeCCCceEEEEecCCCE--------E
Confidence 46788888887765443322 1 1234778999987 544 444456789999987652 2
Q ss_pred eeeecc--------------ccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCC
Q psy4579 172 TIFTGH--------------TAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINAT 214 (368)
Q Consensus 172 ~~~~~h--------------~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~ 214 (368)
.++.+- .......+.++++|+++.++++.+.++.|++||..++
T Consensus 659 ~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~~~~I~v~d~~~g 715 (1057)
T PLN02919 659 RTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAGQHQIWEYNISDG 715 (1057)
T ss_pred EEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECCCCeEEEEECCCC
Confidence 222110 0001112489999964777888888999999998765
|
|
| >COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.00024 Score=59.54 Aligned_cols=84 Identities=18% Similarity=0.257 Sum_probs=57.7
Q ss_pred CCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCC-CCCcccccceeeecccccee---------cceeeEEeCC-CCC
Q psy4579 127 TDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATP-KENRVIDAKTIFTGHTAVVE---------VRYGLSWNPS-LNG 195 (368)
Q Consensus 127 h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~-~~~~~~~~~~~~~~h~~~v~---------~~~~i~~~p~-~~~ 195 (368)
..+.|+++.|...| .+|++|...|.|-+|.-+... ++- +....+++|..... .+..|.|..+ +-.
T Consensus 25 ead~ItaVefd~tg-~YlatGDkgGRVvlfer~~s~~cey---kf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~ 100 (460)
T COG5170 25 EADKITAVEFDETG-LYLATGDKGGRVVLFEREKSYGCEY---KFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRN 100 (460)
T ss_pred ccceeeEEEecccc-ceEeecCCCceEEEeecccccccch---hhhhhhcccccchhhhhhccHHHHhhheeeecCCCcc
Confidence 45679999999999 999999999999999866543 111 12234555542110 1237888654 334
Q ss_pred eEEEeeCCCcEEEEECCCC
Q psy4579 196 YLLSASDDHTICLWDINAT 214 (368)
Q Consensus 196 ~l~s~s~dg~i~iwd~~~~ 214 (368)
.++..+.|.+|++|.+...
T Consensus 101 hFLlstNdktiKlWKiyek 119 (460)
T COG5170 101 HFLLSTNDKTIKLWKIYEK 119 (460)
T ss_pred eEEEecCCceeeeeeeecc
Confidence 5777789999999998764
|
|
| >KOG3617|consensus | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.00032 Score=66.50 Aligned_cols=104 Identities=18% Similarity=0.390 Sum_probs=77.4
Q ss_pred ccccCCcccCCCCcccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeec
Q psy4579 97 QFDASNYDTDKGGNVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTG 176 (368)
Q Consensus 97 ~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~ 176 (368)
.+..+.+.+...|.|-|+-..+. ........-.+++++|+|.. -.||.|-.-|.+.+|...+.. .......
T Consensus 29 lfAVA~fS~er~GSVtIfadtGE-Pqr~Vt~P~hatSLCWHpe~-~vLa~gwe~g~~~v~~~~~~e-------~htv~~t 99 (1416)
T KOG3617|consen 29 LFAVASFSPERGGSVTIFADTGE-PQRDVTYPVHATSLCWHPEE-FVLAQGWEMGVSDVQKTNTTE-------THTVVET 99 (1416)
T ss_pred eeEEEEecCCCCceEEEEecCCC-CCcccccceehhhhccChHH-HHHhhccccceeEEEecCCce-------eeeeccC
Confidence 34444455566788888876654 22222223345679999997 899999999999999987653 2244556
Q ss_pred cccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCC
Q psy4579 177 HTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINA 213 (368)
Q Consensus 177 h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~ 213 (368)
|..++. .+.|+++ ++.++|+..=|.|.+|....
T Consensus 100 h~a~i~---~l~wS~~-G~~l~t~d~~g~v~lwr~d~ 132 (1416)
T KOG3617|consen 100 HPAPIQ---GLDWSHD-GTVLMTLDNPGSVHLWRYDV 132 (1416)
T ss_pred CCCCce---eEEecCC-CCeEEEcCCCceeEEEEeee
Confidence 888886 9999999 99999999999999997763
|
|
| >PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [] | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.00084 Score=67.39 Aligned_cols=191 Identities=17% Similarity=0.198 Sum_probs=104.1
Q ss_pred CCCcccCC----CCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCC---------------------
Q psy4579 107 KGGNVQLP----NEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINAT--------------------- 161 (368)
Q Consensus 107 ~~g~i~i~----~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~--------------------- 161 (368)
.+|.|.+. +.+.........-+..|.|++||||+ ..||....++++.+..-.-.
T Consensus 95 ~~Gdi~~~~~~~~~~~~~~E~VG~vd~GI~a~~WSPD~-Ella~vT~~~~l~~mt~~fd~i~E~~l~~~~~~~~~~VsVG 173 (928)
T PF04762_consen 95 ASGDIILVREDPDPDEDEIEIVGSVDSGILAASWSPDE-ELLALVTGEGNLLLMTRDFDPISEVPLDSDDFGESKHVSVG 173 (928)
T ss_pred CCceEEEEEccCCCCCceeEEEEEEcCcEEEEEECCCc-CEEEEEeCCCEEEEEeccceEEEEeecCccccCCCceeeec
Confidence 36777776 55444444444567899999999998 88888888888877643210
Q ss_pred --CCCCcc----c--------ccc------eeeeccccceecceeeEEeCCCCCeEEEeeC---C---CcEEEEECCCCC
Q psy4579 162 --PKENRV----I--------DAK------TIFTGHTAVVEVRYGLSWNPSLNGYLLSASD---D---HTICLWDINATP 215 (368)
Q Consensus 162 --~~~~~~----~--------~~~------~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~---d---g~i~iwd~~~~~ 215 (368)
+++... . ++. ..+.-..+.+ .|+|-.| +.+||+.+- . ..++||+-+..
T Consensus 174 WGkKeTQF~Gs~gK~aa~~~~~p~~~~~d~~~~s~dd~~~----~ISWRGD-G~yFAVss~~~~~~~~R~iRVy~ReG~- 247 (928)
T PF04762_consen 174 WGKKETQFHGSAGKAAARQLRDPTVPKVDEGKLSWDDGRV----RISWRGD-GEYFAVSSVEPETGSRRVIRVYSREGE- 247 (928)
T ss_pred cCcccCccCcchhhhhhhhccCCCCCccccCccccCCCce----EEEECCC-CcEEEEEEEEcCCCceeEEEEECCCce-
Confidence 000000 0 000 0111112333 8999988 999998874 2 57999986521
Q ss_pred CCCccccceeeeecccccEeEEEEeeecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeee
Q psy4579 216 KENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEI 295 (368)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 295 (368)
...+-..-.+--.+++|.|. .-++++....+ ....+..|+. +| ++-|+.....
T Consensus 248 -------L~stSE~v~gLe~~l~WrPs-----------G~lIA~~q~~~--~~~~VvFfEr-NG------LrhgeF~l~~ 300 (928)
T PF04762_consen 248 -------LQSTSEPVDGLEGALSWRPS-----------GNLIASSQRLP--DRHDVVFFER-NG------LRHGEFTLRF 300 (928)
T ss_pred -------EEeccccCCCccCCccCCCC-----------CCEEEEEEEcC--CCcEEEEEec-CC------cEeeeEecCC
Confidence 11111111122235677661 11222222111 1122222321 11 1122222222
Q ss_pred ecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCC
Q psy4579 296 KINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHP 334 (368)
Q Consensus 296 ~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~ 334 (368)
. .....|..++|++++ .+||..-.|. |.+|-..++.
T Consensus 301 ~-~~~~~v~~l~Wn~ds-~iLAv~~~~~-vqLWt~~NYH 336 (928)
T PF04762_consen 301 D-PEEEKVIELAWNSDS-EILAVWLEDR-VQLWTRSNYH 336 (928)
T ss_pred C-CCCceeeEEEECCCC-CEEEEEecCC-ceEEEeeCCE
Confidence 1 345688999999999 6887765554 9999987643
|
|
| >KOG2041|consensus | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.00013 Score=67.61 Aligned_cols=104 Identities=18% Similarity=0.297 Sum_probs=75.9
Q ss_pred CCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCC--------cccccceeeeccccceecceeeEEeCCCCCeEE
Q psy4579 127 TDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKEN--------RVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLL 198 (368)
Q Consensus 127 h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~--------~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~ 198 (368)
.+....|++|+... .++|+|+.||.+++-.+.+..... ..+..-+++.||...|. .+.|+.. .+.|-
T Consensus 13 nnvkL~c~~WNke~-gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~---vvTWNe~-~QKLT 87 (1189)
T KOG2041|consen 13 NNVKLHCAEWNKES-GYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVM---VVTWNEN-NQKLT 87 (1189)
T ss_pred CCceEEEEEEcccC-CeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEE---EEEeccc-ccccc
Confidence 45678899999987 899999999999999887643211 12334468899999995 9999987 88999
Q ss_pred EeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEe
Q psy4579 199 SASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIH 240 (368)
Q Consensus 199 s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~ 240 (368)
|...+|.|.+|-+-.+. |.....-......|.+++|+
T Consensus 88 tSDt~GlIiVWmlykgs-----W~EEMiNnRnKSvV~SmsWn 124 (1189)
T KOG2041|consen 88 TSDTSGLIIVWMLYKGS-----WCEEMINNRNKSVVVSMSWN 124 (1189)
T ss_pred ccCCCceEEEEeeeccc-----HHHHHhhCcCccEEEEEEEc
Confidence 99999999999886652 11011111234556778886
|
|
| >PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00051 Score=57.10 Aligned_cols=162 Identities=15% Similarity=0.190 Sum_probs=89.5
Q ss_pred eeeEecCCcccccCCCCccccccCcceeeeccccC-----CCCCcEEEEEEecCCCcc------ccccCCcccCCCCccc
Q psy4579 44 LTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTS-----DEQNHLLIASVQLPNEDA------QFDASNYDTDKGGNVQ 112 (368)
Q Consensus 44 ~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~i~~~~~~~~~~------~~~~~~~~~~~~g~i~ 112 (368)
+-++|+||++.||++...|+|++++.......... ...-...|+.+.|.+... ++.+.. ..|.++
T Consensus 47 Rkl~WSpD~tlLa~a~S~G~i~vfdl~g~~lf~I~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~----Y~G~L~ 122 (282)
T PF15492_consen 47 RKLAWSPDCTLLAYAESTGTIRVFDLMGSELFVIPPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVIN----YRGQLR 122 (282)
T ss_pred eEEEECCCCcEEEEEcCCCeEEEEecccceeEEcCcccccCCccccceeeeEeeccccccccceeEEEEe----ccceee
Confidence 45899999999999999999965543211100000 011123467776633221 111122 234444
Q ss_pred CCCC------Ceeee--ecccc-CCCCceeeEecCCCCCeeEEEeC-CC----------cEEEEeCCCCCC--------C
Q psy4579 113 LPNE------DAQFD--ASNYD-TDKGGYGLSWNPSLNGYLLSASD-DH----------TICLWDINATPK--------E 164 (368)
Q Consensus 113 i~~~------~~~~~--~~~~~-h~~~v~~l~~sp~~~~~lasg~~-dg----------~v~iwd~~~~~~--------~ 164 (368)
-+-. ..+.. ..+.. +...|.++.|+|.. ++|+.|+. .. =+..|.+-+... .
T Consensus 123 Sy~vs~gt~q~y~e~hsfsf~~~yp~Gi~~~vy~p~h-~LLlVgG~~~~~~~~s~a~~~GLtaWRiL~~~Pyyk~v~~~~ 201 (282)
T PF15492_consen 123 SYLVSVGTNQGYQENHSFSFSSHYPHGINSAVYHPKH-RLLLVGGCEQNQDGMSKASSCGLTAWRILSDSPYYKQVTSSE 201 (282)
T ss_pred eEEEEcccCCcceeeEEEEecccCCCceeEEEEcCCC-CEEEEeccCCCCCccccccccCceEEEEcCCCCcEEEccccC
Confidence 3321 11122 22222 47789999999998 77766653 21 145565543210 0
Q ss_pred Cc---------ccc--cceeeec---cccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCC
Q psy4579 165 NR---------VID--AKTIFTG---HTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINAT 214 (368)
Q Consensus 165 ~~---------~~~--~~~~~~~---h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~ 214 (368)
.. ..+ ....+.. ....| +.+..+|+ +.+||+...+|.|.+|++-.-
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~fs~~~~~~d~i---~kmSlSPd-g~~La~ih~sG~lsLW~iPsL 261 (282)
T PF15492_consen 202 DDITASSKRRGLLRIPSFKFFSRQGQEQDGI---FKMSLSPD-GSLLACIHFSGSLSLWEIPSL 261 (282)
T ss_pred ccccccccccceeeccceeeeeccccCCCce---EEEEECCC-CCEEEEEEcCCeEEEEecCcc
Confidence 00 000 0111111 12333 68999999 999999999999999998764
|
|
| >KOG1832|consensus | Back alignment and domain information |
|---|
Probab=97.66 E-value=4.3e-05 Score=72.46 Aligned_cols=81 Identities=17% Similarity=0.147 Sum_probs=63.5
Q ss_pred ccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeC
Q psy4579 123 SNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASD 202 (368)
Q Consensus 123 ~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~ 202 (368)
.+..|+...+|++|+-.. +.|+.|+..|.|+++++.++.. .....+|...++ -+.=+.+++.+|.+++.
T Consensus 1096 ~frd~~~~fTc~afs~~~-~hL~vG~~~Geik~~nv~sG~~-------e~s~ncH~SavT---~vePs~dgs~~Ltsss~ 1164 (1516)
T KOG1832|consen 1096 SFRDETALFTCIAFSGGT-NHLAVGSHAGEIKIFNVSSGSM-------EESVNCHQSAVT---LVEPSVDGSTQLTSSSS 1164 (1516)
T ss_pred hhhccccceeeEEeecCC-ceEEeeeccceEEEEEccCccc-------cccccccccccc---cccccCCcceeeeeccc
Confidence 456688899999999987 9999999999999999999863 466789999997 77777773444444444
Q ss_pred CC-cEEEEECCCC
Q psy4579 203 DH-TICLWDINAT 214 (368)
Q Consensus 203 dg-~i~iwd~~~~ 214 (368)
.. ...+|++...
T Consensus 1165 S~PlsaLW~~~s~ 1177 (1516)
T KOG1832|consen 1165 SSPLSALWDASST 1177 (1516)
T ss_pred cCchHHHhccccc
Confidence 44 5779998763
|
|
| >KOG2695|consensus | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.00011 Score=62.27 Aligned_cols=117 Identities=12% Similarity=0.271 Sum_probs=79.3
Q ss_pred EEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccce
Q psy4579 145 LSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAK 224 (368)
Q Consensus 145 asg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~ 224 (368)
++.+.+-.|-+-|++++.. +.|. -.+.| +++.|... ++++..|...|.|..+|+|....
T Consensus 228 fs~G~sqqv~L~nvetg~~--------qsf~-sksDV---fAlQf~~s-~nLv~~GcRngeI~~iDLR~rnq-------- 286 (425)
T KOG2695|consen 228 FSVGLSQQVLLTNVETGHQ--------QSFQ-SKSDV---FALQFAGS-DNLVFNGCRNGEIFVIDLRCRNQ-------- 286 (425)
T ss_pred ecccccceeEEEEeecccc--------cccc-cchhH---HHHHhccc-CCeeEecccCCcEEEEEeeeccc--------
Confidence 5556677788888888742 3444 44556 59999987 89999999999999999987521
Q ss_pred eeeecccccEeEEEEeeecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCccccee
Q psy4579 225 TIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVN 304 (368)
Q Consensus 225 ~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~ 304 (368)
|. . ... ....|...|+
T Consensus 287 ----G~---~-------------------------------------------------------~~a--~rlyh~Ssvt 302 (425)
T KOG2695|consen 287 ----GN---G-------------------------------------------------------WCA--QRLYHDSSVT 302 (425)
T ss_pred ----CC---C-------------------------------------------------------cce--EEEEcCcchh
Confidence 11 0 000 1125888888
Q ss_pred EEEEeC-CCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeecccC
Q psy4579 305 RARYMP-QNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQK 354 (368)
Q Consensus 305 ~~~~~p-~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~ 354 (368)
++.--. ++++++ +.+.+|+|++||.|..+. ..-+.++.||.+
T Consensus 303 slq~Lq~s~q~Lm-aS~M~gkikLyD~R~~K~-------~~~V~qYeGHvN 345 (425)
T KOG2695|consen 303 SLQILQFSQQKLM-ASDMTGKIKLYDLRATKC-------KKSVMQYEGHVN 345 (425)
T ss_pred hhhhhccccceEe-eccCcCceeEeeehhhhc-------ccceeeeecccc
Confidence 887665 554555 558999999999996432 123456677754
|
|
| >KOG4190|consensus | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.00017 Score=65.05 Aligned_cols=130 Identities=21% Similarity=0.305 Sum_probs=83.2
Q ss_pred ceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeeecccccCCC
Q psy4579 171 KTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSD 250 (368)
Q Consensus 171 ~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d 250 (368)
...+.||+..|+ .++--.+ .+-+++++.|.+|++|.++......+.-.+..++..|+.+|+++.|-..+-...+.|
T Consensus 728 L~nf~GH~~~iR---ai~AidN-ENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~ScD 803 (1034)
T KOG4190|consen 728 LCNFTGHQEKIR---AIAAIDN-ENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIASCD 803 (1034)
T ss_pred eecccCcHHHhH---HHHhccc-ccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceeeecc
Confidence 467889999997 4444334 788999999999999999876655555567788899999999999864332222333
Q ss_pred CccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeec-CcccceeEEEEeC--CCCcEEEEecCCCeEEE
Q psy4579 251 EQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKI-NHEGEVNRARYMP--QNPCVIATKTPSSDVLV 327 (368)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~-~h~~~i~~~~~~p--~~~~~lasgs~Dg~i~i 327 (368)
+.+++| |..-++...++.. ...+.+.-+..-| +.+.++|.++...+|++
T Consensus 804 ~giHlW----------------------------DPFigr~Laq~~dapk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl 855 (1034)
T KOG4190|consen 804 GGIHLW----------------------------DPFIGRLLAQMEDAPKEGAGGNIKCLENVDRHILIAGCSAESTVKL 855 (1034)
T ss_pred Ccceee----------------------------cccccchhHhhhcCcccCCCceeEecccCcchheeeeccchhhhee
Confidence 334443 3333433332221 1222333333333 34445666689999999
Q ss_pred EECCC
Q psy4579 328 FDYTK 332 (368)
Q Consensus 328 wd~~~ 332 (368)
+|.+.
T Consensus 856 ~DaRs 860 (1034)
T KOG4190|consen 856 FDARS 860 (1034)
T ss_pred eeccc
Confidence 99986
|
|
| >smart00320 WD40 WD40 repeats | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00013 Score=41.11 Aligned_cols=36 Identities=36% Similarity=0.430 Sum_probs=31.3
Q ss_pred eeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEe
Q psy4579 121 DASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWD 157 (368)
Q Consensus 121 ~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd 157 (368)
......|...|.++.|++.+ ..+++++.|+.+++|+
T Consensus 5 ~~~~~~~~~~i~~~~~~~~~-~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 5 LKTLKGHTGPVTSVAFSPDG-KYLASASDDGTIKLWD 40 (40)
T ss_pred EEEEEecCCceeEEEECCCC-CEEEEecCCCeEEEcC
Confidence 34445688899999999998 8999999999999996
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. |
| >smart00320 WD40 WD40 repeats | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00023 Score=40.02 Aligned_cols=31 Identities=19% Similarity=0.468 Sum_probs=28.3
Q ss_pred CcccceeEEEEeCCCCcEEEEecCCCeEEEEE
Q psy4579 298 NHEGEVNRARYMPQNPCVIATKTPSSDVLVFD 329 (368)
Q Consensus 298 ~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd 329 (368)
.|...|.++.|+|.+ .++++++.|+.+++|+
T Consensus 10 ~~~~~i~~~~~~~~~-~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 10 GHTGPVTSVAFSPDG-KYLASASDDGTIKLWD 40 (40)
T ss_pred ecCCceeEEEECCCC-CEEEEecCCCeEEEcC
Confidence 788999999999998 6788999999999996
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. |
| >KOG0882|consensus | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00045 Score=60.82 Aligned_cols=205 Identities=14% Similarity=0.038 Sum_probs=117.4
Q ss_pred cccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeC-
Q psy4579 124 NYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASD- 202 (368)
Q Consensus 124 ~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~- 202 (368)
.+-|.+.|+.+.-... +++.+++.||.++.|.-..-. ..+.+..+..|-+.+. +++-+.+ +-++.|.+.
T Consensus 5 symhrd~i~hv~~tka--~fiiqASlDGh~KFWkKs~is----GvEfVKhFraHL~~I~---sl~~S~d-g~L~~Sv~d~ 74 (558)
T KOG0882|consen 5 SYMHRDVITHVFPTKA--KFIIQASLDGHKKFWKKSRIS----GVEFVKHFRAHLGVIL---SLAVSYD-GWLFRSVEDP 74 (558)
T ss_pred hhcccceeeeEeeehh--heEEeeecchhhhhcCCCCcc----ceeehhhhHHHHHHHH---hhhcccc-ceeEeeccCc
Confidence 3457788887665543 799999999999999754311 1235566778888884 8888887 889999887
Q ss_pred CCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeeecccccCCCCccceEEEEeecCCcccccccccccCCCCCcc
Q psy4579 203 DHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFG 282 (368)
Q Consensus 203 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 282 (368)
|..++++|+.+-.... +..+.--...+ .|. ++.+|.... ..++ ...++.+.
T Consensus 75 Dhs~KvfDvEn~Dmin-----miKL~~lPg~a---~wv-----~skGd~~s~---IAVs-------------~~~sg~i~ 125 (558)
T KOG0882|consen 75 DHSVKVFDVENFDMIN-----MIKLVDLPGFA---EWV-----TSKGDKISL---IAVS-------------LFKSGKIF 125 (558)
T ss_pred ccceeEEEeeccchhh-----hcccccCCCce---EEe-----cCCCCeeee---EEee-------------cccCCCcE
Confidence 9999999998753210 00111011111 111 001110000 1110 11122223
Q ss_pred cccCCCCc-eeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCC-----CCCCCCceeeecccCce
Q psy4579 283 GFGSVSGK-IEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDP-----NGECHPDLRLRGHQKEG 356 (368)
Q Consensus 283 ~~~~~~~~-~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~-----~~~~~~~~~~~gh~~~V 356 (368)
++|..... ....+..-|..+|.++.++|.+. .++|....|.|.-|.....-..+.. .....-+..+...++..
T Consensus 126 VvD~~~d~~q~~~fkklH~sPV~~i~y~qa~D-s~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~p 204 (558)
T KOG0882|consen 126 VVDGFGDFCQDGYFKKLHFSPVKKIRYNQAGD-SAVSIDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEP 204 (558)
T ss_pred EECCcCCcCccceecccccCceEEEEeecccc-ceeeccccceeEeecCCCcccCccccccccccccchhhcccccccCc
Confidence 33322222 22333346999999999999995 5558888899999998731111110 00011111223346667
Q ss_pred eeecceeeeecC
Q psy4579 357 LIEGTYNCYLQR 368 (368)
Q Consensus 357 ~~l~w~p~~~~~ 368 (368)
.++.|+|.-.|+
T Consensus 205 ts~Efsp~g~qi 216 (558)
T KOG0882|consen 205 TSFEFSPDGAQI 216 (558)
T ss_pred cceEEccccCcc
Confidence 788888877664
|
|
| >KOG2066|consensus | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.0021 Score=60.80 Aligned_cols=114 Identities=14% Similarity=0.209 Sum_probs=73.0
Q ss_pred CCCcccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceeccee
Q psy4579 107 KGGNVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYG 186 (368)
Q Consensus 107 ~~g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 186 (368)
-+|.|.+.+.++.. .+.+.|... ..+| .+++|||.||+|.|-.+.+.+. ..++. -..++. +
T Consensus 57 H~g~v~~~~~~~~~-~~~~~~s~~------~~~G-ey~asCS~DGkv~I~sl~~~~~-------~~~~d-f~rpik---s 117 (846)
T KOG2066|consen 57 HRGAVYLTTCQGNP-KTNFDHSSS------ILEG-EYVASCSDDGKVVIGSLFTDDE-------ITQYD-FKRPIK---S 117 (846)
T ss_pred ccceEEEEecCCcc-ccccccccc------ccCC-ceEEEecCCCcEEEeeccCCcc-------ceeEe-cCCcce---e
Confidence 35666666665544 444445433 5567 8999999999999998877642 23333 234554 8
Q ss_pred eEEeCC----CCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeeeccc
Q psy4579 187 LSWNPS----LNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLILG 245 (368)
Q Consensus 187 i~~~p~----~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~ 245 (368)
++++|+ ....+++||.-| +.++.-+=-+.. .. ..+..-.++|.++.|+..+++
T Consensus 118 ial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk----~~-v~l~~~eG~I~~i~W~g~lIA 174 (846)
T KOG2066|consen 118 IALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNK----DS-VVLSEGEGPIHSIKWRGNLIA 174 (846)
T ss_pred EEeccchhhhhhhheeecCcce-EEEehhhhhcCc----cc-eeeecCccceEEEEecCcEEE
Confidence 899887 356799999999 777643221110 11 134456788999999865443
|
|
| >TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.017 Score=51.26 Aligned_cols=95 Identities=12% Similarity=0.001 Sum_probs=59.6
Q ss_pred CcccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEE-e---------CCCcEEEEeCCCCCCCCcccccceeeeccc
Q psy4579 109 GNVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSA-S---------DDHTICLWDINATPKENRVIDAKTIFTGHT 178 (368)
Q Consensus 109 g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg-~---------~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~ 178 (368)
|+|.+.|.+...+.....-...-..+ ++|++ +.|..+ + .+..|.+||..+.+. ...+.-..
T Consensus 27 ~~v~ViD~~~~~v~g~i~~G~~P~~~-~spDg-~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~-------~~~i~~p~ 97 (352)
T TIGR02658 27 TQVYTIDGEAGRVLGMTDGGFLPNPV-VASDG-SFFAHASTVYSRIARGKRTDYVEVIDPQTHLP-------IADIELPE 97 (352)
T ss_pred ceEEEEECCCCEEEEEEEccCCCcee-ECCCC-CEEEEEeccccccccCCCCCEEEEEECccCcE-------EeEEccCC
Confidence 67778887654443333222222224 99999 555444 4 588999999998753 33332111
Q ss_pred ------cceecceeeEEeCCCCCeEEEee-C-CCcEEEEECCCCC
Q psy4579 179 ------AVVEVRYGLSWNPSLNGYLLSAS-D-DHTICLWDINATP 215 (368)
Q Consensus 179 ------~~v~~~~~i~~~p~~~~~l~s~s-~-dg~i~iwd~~~~~ 215 (368)
.+-. ..++++|+ +.+|+... . +..|.+.|+.+++
T Consensus 98 ~p~~~~~~~~--~~~~ls~d-gk~l~V~n~~p~~~V~VvD~~~~k 139 (352)
T TIGR02658 98 GPRFLVGTYP--WMTSLTPD-NKTLLFYQFSPSPAVGVVDLEGKA 139 (352)
T ss_pred CchhhccCcc--ceEEECCC-CCEEEEecCCCCCEEEEEECCCCc
Confidence 1111 27889999 77777665 3 7899999998874
|
This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome. |
| >PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3 | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.0096 Score=53.35 Aligned_cols=200 Identities=10% Similarity=0.167 Sum_probs=96.1
Q ss_pred CCCcccCCCCCe---ee-eecccc-CCCCceeeEecCCCCCeeEEEe-CCCcEEEEeCCCCCCCCcccccceeee--ccc
Q psy4579 107 KGGNVQLPNEDA---QF-DASNYD-TDKGGYGLSWNPSLNGYLLSAS-DDHTICLWDINATPKENRVIDAKTIFT--GHT 178 (368)
Q Consensus 107 ~~g~i~i~~~~~---~~-~~~~~~-h~~~v~~l~~sp~~~~~lasg~-~dg~v~iwd~~~~~~~~~~~~~~~~~~--~h~ 178 (368)
..|.|..|..+. .. ...... ....-..++++|++ ++|+++. .+|+|.++++........ ....+. ++.
T Consensus 60 ~~g~v~~~~i~~~~g~L~~~~~~~~~g~~p~~i~~~~~g-~~l~vany~~g~v~v~~l~~~g~l~~---~~~~~~~~g~g 135 (345)
T PF10282_consen 60 DSGGVSSYRIDPDTGTLTLLNSVPSGGSSPCHIAVDPDG-RFLYVANYGGGSVSVFPLDDDGSLGE---VVQTVRHEGSG 135 (345)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEEEESSSCEEEEEECTTS-SEEEEEETTTTEEEEEEECTTSEEEE---EEEEEESEEEE
T ss_pred CCCCEEEEEECCCcceeEEeeeeccCCCCcEEEEEecCC-CEEEEEEccCCeEEEEEccCCcccce---eeeecccCCCC
Confidence 456666655432 21 111222 33445679999999 7777776 589999999987432111 111111 100
Q ss_pred -----cceecceeeEEeCCCCCeEEEee-CCCcEEEEECCCCCCCCccccceeeee-cccccEeEEEEeeecccccCCCC
Q psy4579 179 -----AVVEVRYGLSWNPSLNGYLLSAS-DDHTICLWDINATPKENRVIDAKTIFT-GHTAVVEDYSIHRLILGTHTSDE 251 (368)
Q Consensus 179 -----~~v~~~~~i~~~p~~~~~l~s~s-~dg~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~v~~v~~~~~~~~~~~~d~ 251 (368)
.....+.++.|+|+ ++++++.. ....|.+|++...... +.....+. .....-..+.|++.
T Consensus 136 ~~~~rq~~~h~H~v~~~pd-g~~v~v~dlG~D~v~~~~~~~~~~~---l~~~~~~~~~~G~GPRh~~f~pd--------- 202 (345)
T PF10282_consen 136 PNPDRQEGPHPHQVVFSPD-GRFVYVPDLGADRVYVYDIDDDTGK---LTPVDSIKVPPGSGPRHLAFSPD--------- 202 (345)
T ss_dssp SSTTTTSSTCEEEEEE-TT-SSEEEEEETTTTEEEEEEE-TTS-T---EEEEEEEECSTTSSEEEEEE-TT---------
T ss_pred CcccccccccceeEEECCC-CCEEEEEecCCCEEEEEEEeCCCce---EEEeeccccccCCCCcEEEEcCC---------
Confidence 00001248999999 77666653 3458999999765321 11111121 12233456677651
Q ss_pred ccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecC--cccceeEEEEeCCCCcEEEEecCCCeEEEEE
Q psy4579 252 QNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKIN--HEGEVNRARYMPQNPCVIATKTPSSDVLVFD 329 (368)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd 329 (368)
..++++.. .+ ...+.+..++...+.+... ........+ .......++++|++.+++++-..+.+|.+|+
T Consensus 203 g~~~Yv~~-e~---s~~v~v~~~~~~~g~~~~~-----~~~~~~~~~~~~~~~~~~i~ispdg~~lyvsnr~~~sI~vf~ 273 (345)
T PF10282_consen 203 GKYAYVVN-EL---SNTVSVFDYDPSDGSLTEI-----QTISTLPEGFTGENAPAEIAISPDGRFLYVSNRGSNSISVFD 273 (345)
T ss_dssp SSEEEEEE-TT---TTEEEEEEEETTTTEEEEE-----EEEESCETTSCSSSSEEEEEE-TTSSEEEEEECTTTEEEEEE
T ss_pred cCEEEEec-CC---CCcEEEEeecccCCceeEE-----EEeeeccccccccCCceeEEEecCCCEEEEEeccCCEEEEEE
Confidence 01111111 00 0011111111111111000 000011001 1225788999999988888888899999999
Q ss_pred CCC
Q psy4579 330 YTK 332 (368)
Q Consensus 330 ~~~ 332 (368)
+..
T Consensus 274 ~d~ 276 (345)
T PF10282_consen 274 LDP 276 (345)
T ss_dssp ECT
T ss_pred Eec
Confidence 953
|
1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H. |
| >KOG1920|consensus | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.011 Score=58.67 Aligned_cols=50 Identities=18% Similarity=0.209 Sum_probs=36.6
Q ss_pred CCCcccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEe
Q psy4579 107 KGGNVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWD 157 (368)
Q Consensus 107 ~~g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd 157 (368)
+.|.|.+-|...........-...|.+++|||+. ..++-...++++.+-+
T Consensus 88 ~~G~iilvd~et~~~eivg~vd~GI~aaswS~De-e~l~liT~~~tll~mT 137 (1265)
T KOG1920|consen 88 ALGDIILVDPETLELEIVGNVDNGISAASWSPDE-ELLALITGRQTLLFMT 137 (1265)
T ss_pred cCCcEEEEcccccceeeeeeccCceEEEeecCCC-cEEEEEeCCcEEEEEe
Confidence 4666766666554444444567899999999998 8888888888877654
|
|
| >KOG1008|consensus | Back alignment and domain information |
|---|
Probab=97.45 E-value=7e-05 Score=68.58 Aligned_cols=186 Identities=13% Similarity=0.155 Sum_probs=103.9
Q ss_pred CCceeeEecCCCC-CeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEee----CC
Q psy4579 129 KGGYGLSWNPSLN-GYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSAS----DD 203 (368)
Q Consensus 129 ~~v~~l~~sp~~~-~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s----~d 203 (368)
..+.|++++-+.. -+++.|..+|.|-+-.++..... ......+|..+.+ +++|++-+.+.||.|- .|
T Consensus 57 qy~kcva~~y~~d~cIlavG~atG~I~l~s~r~~hdS-----s~E~tp~~ar~Ct---~lAwneLDtn~LAagldkhrnd 128 (783)
T KOG1008|consen 57 QYVKCVASFYGNDRCILAVGSATGNISLLSVRHPHDS-----SAEVTPGYARPCT---SLAWNELDTNHLAAGLDKHRND 128 (783)
T ss_pred CCceeehhhcCCchhhhhhccccCceEEeecCCcccc-----cceeccccccccc---ccccccccHHHHHhhhhhhccc
Confidence 4566777765542 47889999999999888764321 1244566777776 9999998678888873 36
Q ss_pred CcEEEEECCCCCCCCccccceeeeec-ccccEeEEEEee--ecccccCCCCccceEEEEeecCCcccccccccccCCCCC
Q psy4579 204 HTICLWDINATPKENRVIDAKTIFTG-HTAVVEDYSIHR--LILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGD 280 (368)
Q Consensus 204 g~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~v~~v~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 280 (368)
..+.|||+.+.-..++. ...|.+ .....++++|.. .++.+|.......+
T Consensus 129 s~~~Iwdi~s~ltvPke---~~~fs~~~l~gqns~cwlrd~klvlaGm~sr~~~i------------------------- 180 (783)
T KOG1008|consen 129 SSLKIWDINSLLTVPKE---SPLFSSSTLDGQNSVCWLRDTKLVLAGMTSRSVHI------------------------- 180 (783)
T ss_pred CCccceecccccCCCcc---ccccccccccCccccccccCcchhhcccccchhhh-------------------------
Confidence 68999999876221110 011111 223344555532 23333332222222
Q ss_pred cccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEE-CCCCCCCCCCCCCCCCceeeecccC----c
Q psy4579 281 FGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFD-YTKHPSKPDPNGECHPDLRLRGHQK----E 355 (368)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd-~~~~~~~~~~~~~~~~~~~~~gh~~----~ 355 (368)
+|++..-.... .-.+..+..+...|-.++++++ ..||.|.+|| .++. ..++.++...++ .
T Consensus 181 ---fdlRqs~~~~~--svnTk~vqG~tVdp~~~nY~cs-~~dg~iAiwD~~rni---------enpl~~i~~~~N~~~~~ 245 (783)
T KOG1008|consen 181 ---FDLRQSLDSVS--SVNTKYVQGITVDPFSPNYFCS-NSDGDIAIWDTYRNI---------ENPLQIILRNENKKPKQ 245 (783)
T ss_pred ---hhhhhhhhhhh--hhhhhhcccceecCCCCCceec-cccCceeeccchhhh---------ccHHHHHhhCCCCcccc
Confidence 11110000000 0123345667788865578866 5599999999 5432 123333322233 3
Q ss_pred eeeecceeee
Q psy4579 356 GLIEGTYNCY 365 (368)
Q Consensus 356 V~~l~w~p~~ 365 (368)
+..++|.|.-
T Consensus 246 l~~~aycPtr 255 (783)
T KOG1008|consen 246 LFALAYCPTR 255 (783)
T ss_pred eeeEEeccCC
Confidence 7888888754
|
|
| >PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.0098 Score=50.50 Aligned_cols=73 Identities=14% Similarity=0.198 Sum_probs=46.0
Q ss_pred CCCceeeEecCCCCCeeEEEeCC--------CcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCe-EE
Q psy4579 128 DKGGYGLSWNPSLNGYLLSASDD--------HTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGY-LL 198 (368)
Q Consensus 128 ~~~v~~l~~sp~~~~~lasg~~d--------g~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~-l~ 198 (368)
....+.+++.|+| ++.++.... |.|..++.. +. ...+...-... ..|+|+|+ ++. ++
T Consensus 85 ~~~~ND~~vd~~G-~ly~t~~~~~~~~~~~~g~v~~~~~~-~~--------~~~~~~~~~~p---NGi~~s~d-g~~lyv 150 (246)
T PF08450_consen 85 FNRPNDVAVDPDG-NLYVTDSGGGGASGIDPGSVYRIDPD-GK--------VTVVADGLGFP---NGIAFSPD-GKTLYV 150 (246)
T ss_dssp TEEEEEEEE-TTS--EEEEEECCBCTTCGGSEEEEEEETT-SE--------EEEEEEEESSE---EEEEEETT-SSEEEE
T ss_pred cCCCceEEEcCCC-CEEEEecCCCccccccccceEEECCC-Ce--------EEEEecCcccc---cceEECCc-chheee
Confidence 4567899999999 777776543 446666655 21 12222122222 39999999 654 55
Q ss_pred EeeCCCcEEEEECCCC
Q psy4579 199 SASDDHTICLWDINAT 214 (368)
Q Consensus 199 s~s~dg~i~iwd~~~~ 214 (368)
+-+..+.|..+++...
T Consensus 151 ~ds~~~~i~~~~~~~~ 166 (246)
T PF08450_consen 151 ADSFNGRIWRFDLDAD 166 (246)
T ss_dssp EETTTTEEEEEEEETT
T ss_pred cccccceeEEEecccc
Confidence 7788889999998654
|
These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A .... |
| >KOG1912|consensus | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.0079 Score=56.91 Aligned_cols=115 Identities=9% Similarity=0.032 Sum_probs=64.9
Q ss_pred CceeeEecCCcc------------cccCCCCccccccCcceeeeccccCC-CCCcEEEEEEec-CCCcc--ccccCCccc
Q psy4579 42 PSLTAQWLPDVT------------SVQLPNEDAQFDASNYDTDKGTHTSD-EQNHLLIASVQL-PNEDA--QFDASNYDT 105 (368)
Q Consensus 42 ~~~~~~~~p~~~------------~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~-~~~~~--~~~~~~~~~ 105 (368)
-|.++.|.|..- ++|++.-.|.|+++++ ..+..... .+....+..+.| +..+. .+.++-
T Consensus 57 ~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil~d~--~~~s~~~~l~~~~~~~qdl~W~~~rd~Srd~LlaI--- 131 (1062)
T KOG1912|consen 57 AVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIILVDF--VLASVINWLSHSNDSVQDLCWVPARDDSRDVLLAI--- 131 (1062)
T ss_pred ceeEEEeccCCCchhccCccccceeEEeccccCcEEEEEe--hhhhhhhhhcCCCcchhheeeeeccCcchheeEEe---
Confidence 377888876522 2444555566655544 44444333 233344566666 32221 222221
Q ss_pred CCCCcccCCCCCeeeeecccc-CCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCC
Q psy4579 106 DKGGNVQLPNEDAQFDASNYD-TDKGGYGLSWNPSLNGYLLSASDDHTICLWDINAT 161 (368)
Q Consensus 106 ~~~g~i~i~~~~~~~~~~~~~-h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~ 161 (368)
.+..++.+||.+.......+. -.....|+++.|-.++.+..-+..|.+.+-+.-..
T Consensus 132 h~ss~lvLwntdtG~k~Wk~~ys~~iLs~f~~DPfd~rh~~~l~s~g~vl~~~~l~~ 188 (1062)
T KOG1912|consen 132 HGSSTLVLWNTDTGEKFWKYDYSHEILSCFRVDPFDSRHFCVLGSKGFVLSCKDLGL 188 (1062)
T ss_pred cCCcEEEEEEccCCceeeccccCCcceeeeeeCCCCcceEEEEccCceEEEEeccCC
Confidence 235678899877544443333 23456779999977677777777788877776443
|
|
| >KOG1912|consensus | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.0068 Score=57.31 Aligned_cols=158 Identities=15% Similarity=0.139 Sum_probs=101.8
Q ss_pred ceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCC-----------CCeEEE
Q psy4579 131 GYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSL-----------NGYLLS 199 (368)
Q Consensus 131 v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~-----------~~~l~s 199 (368)
-.+++|+|.| ++|=|+ ...|.+-|..+.+ .++.+..|...|+ .+.|.|.. .-+||+
T Consensus 18 ~~A~Dw~~~G--LiAygs-hslV~VVDs~s~q-------~iqsie~h~s~V~---~VrWap~~~p~~llS~~~~~lliAs 84 (1062)
T KOG1912|consen 18 RNAADWSPSG--LIAYGS-HSLVSVVDSRSLQ-------LIQSIELHQSAVT---SVRWAPAPSPRDLLSPSSSQLLIAS 84 (1062)
T ss_pred ccccccCccc--eEEEec-CceEEEEehhhhh-------hhhccccCcccee---EEEeccCCCchhccCccccceeEEe
Confidence 5678999987 566555 5678888988764 5677888998886 99998852 125888
Q ss_pred eeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeeecccccCCCCccceEEEEeecCCcccccccccccCCCC
Q psy4579 200 ASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKG 279 (368)
Q Consensus 200 ~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 279 (368)
+...|.|.+||..... .+.-+..|..++..+.|-+.. |....+. ..+ ....
T Consensus 85 aD~~GrIil~d~~~~s-------~~~~l~~~~~~~qdl~W~~~r------d~Srd~L-laI---------------h~ss 135 (1062)
T KOG1912|consen 85 ADISGRIILVDFVLAS-------VINWLSHSNDSVQDLCWVPAR------DDSRDVL-LAI---------------HGSS 135 (1062)
T ss_pred ccccCcEEEEEehhhh-------hhhhhcCCCcchhheeeeecc------Ccchhee-EEe---------------cCCc
Confidence 8899999999998762 344566678888888885411 0000110 000 0112
Q ss_pred CcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECC
Q psy4579 280 DFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYT 331 (368)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~ 331 (368)
.+.+|+..+|+...... .-.....|+.+.|....-+..-+..|.+-+-+..
T Consensus 136 ~lvLwntdtG~k~Wk~~-ys~~iLs~f~~DPfd~rh~~~l~s~g~vl~~~~l 186 (1062)
T KOG1912|consen 136 TLVLWNTDTGEKFWKYD-YSHEILSCFRVDPFDSRHFCVLGSKGFVLSCKDL 186 (1062)
T ss_pred EEEEEEccCCceeeccc-cCCcceeeeeeCCCCcceEEEEccCceEEEEecc
Confidence 35556666777665554 3344567788888654444344566777776654
|
|
| >KOG2066|consensus | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.0049 Score=58.39 Aligned_cols=144 Identities=13% Similarity=0.189 Sum_probs=90.0
Q ss_pred CCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcE
Q psy4579 127 TDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTI 206 (368)
Q Consensus 127 h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i 206 (368)
..+.++|++++- ..|+-|..+|.|++.+.... + .+...|+.. .-+ +.+++|||.||+|
T Consensus 38 ~~D~is~~av~~---~~~~~GtH~g~v~~~~~~~~--------~-~~~~~~s~~---------~~~-Gey~asCS~DGkv 95 (846)
T KOG2066|consen 38 QNDAISCCAVHD---KFFALGTHRGAVYLTTCQGN--------P-KTNFDHSSS---------ILE-GEYVASCSDDGKV 95 (846)
T ss_pred hhhHHHHHHhhc---ceeeeccccceEEEEecCCc--------c-ccccccccc---------ccC-CceEEEecCCCcE
Confidence 456788888873 78999999999999998754 2 333445432 123 8999999999999
Q ss_pred EEEECCCCCCCCccccceeeeecccccEeEEEEeeecc-------cccCCCCccceEEEEeecCCcccccccccccCCCC
Q psy4579 207 CLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLIL-------GTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKG 279 (368)
Q Consensus 207 ~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~-------~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 279 (368)
.|-.+-+... ...+. ...++.+++++|... .+++..+ +.+.. +.|
T Consensus 96 ~I~sl~~~~~-------~~~~d-f~rpiksial~Pd~~~~~sk~fv~GG~ag---lvL~e------------r~w----- 147 (846)
T KOG2066|consen 96 VIGSLFTDDE-------ITQYD-FKRPIKSIALHPDFSRQQSKQFVSGGMAG---LVLSE------------RNW----- 147 (846)
T ss_pred EEeeccCCcc-------ceeEe-cCCcceeEEeccchhhhhhhheeecCcce---EEEeh------------hhh-----
Confidence 9998877642 12222 456788999987522 2221111 11110 111
Q ss_pred CcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCC
Q psy4579 280 DFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
+ |...........++|.++.|. | +++|-++.+| |++||...
T Consensus 148 -l-------gnk~~v~l~~~eG~I~~i~W~--g-~lIAWand~G-v~vyd~~~ 188 (846)
T KOG2066|consen 148 -L-------GNKDSVVLSEGEGPIHSIKWR--G-NLIAWANDDG-VKVYDTPT 188 (846)
T ss_pred -h-------cCccceeeecCccceEEEEec--C-cEEEEecCCC-cEEEeccc
Confidence 0 000001112467899999997 3 6887765554 89999865
|
|
| >KOG2114|consensus | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.016 Score=55.60 Aligned_cols=183 Identities=10% Similarity=0.135 Sum_probs=101.3
Q ss_pred EecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccc-eecceeeEEeCCCCCeEEEeeCCCc-----EEE
Q psy4579 135 SWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAV-VEVRYGLSWNPSLNGYLLSASDDHT-----ICL 208 (368)
Q Consensus 135 ~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~-v~~~~~i~~~p~~~~~l~s~s~dg~-----i~i 208 (368)
+|++.+ ..+|.|+.||.|.+.+-.-. ....++.+... + ..-|.-++.++|++.+.|+. ++|
T Consensus 30 c~~s~~-~~vvigt~~G~V~~Ln~s~~--------~~~~fqa~~~siv----~~L~~~~~~~~L~sv~Ed~~~np~llki 96 (933)
T KOG2114|consen 30 CCSSST-GSVVIGTADGRVVILNSSFQ--------LIRGFQAYEQSIV----QFLYILNKQNFLFSVGEDEQGNPVLLKI 96 (933)
T ss_pred EEcCCC-ceEEEeeccccEEEecccce--------eeehheecchhhh----hHhhcccCceEEEEEeecCCCCceEEEE
Confidence 356776 89999999999988765432 34667777666 4 44444443568888887765 899
Q ss_pred EECCCCCCCCccccce---eeee----cccccEeEEEEeee--cccccCCCCccceEEEEeecCCcccccccccccCCCC
Q psy4579 209 WDINATPKENRVIDAK---TIFT----GHTAVVEDYSIHRL--ILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKG 279 (368)
Q Consensus 209 wd~~~~~~~~~~~~~~---~~~~----~~~~~v~~v~~~~~--~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 279 (368)
||++..++... -.++ +.+. ....++.+++.+.. .++.|-.+|.+..+-... .+.
T Consensus 97 w~lek~~~n~s-P~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi---------------~RD- 159 (933)
T KOG2114|consen 97 WDLEKVDKNNS-PQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDI---------------LRD- 159 (933)
T ss_pred ecccccCCCCC-cceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcc---------------hhc-
Confidence 99977643321 0122 1111 12345566666542 222222222222111000 000
Q ss_pred CcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeecccCceeee
Q psy4579 280 DFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIE 359 (368)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l 359 (368)
.|. .......-..+|+.+++..++..++ -+.....|.+|.+.. +......+..|...+.|-
T Consensus 160 --------rgs-r~~~~~~~~~pITgL~~~~d~~s~l-Fv~Tt~~V~~y~l~g---------r~p~~~~ld~~G~~lnCs 220 (933)
T KOG2114|consen 160 --------RGS-RQDYSHRGKEPITGLALRSDGKSVL-FVATTEQVMLYSLSG---------RTPSLKVLDNNGISLNCS 220 (933)
T ss_pred --------ccc-ceeeeccCCCCceeeEEecCCceeE-EEEecceeEEEEecC---------CCcceeeeccCCccceee
Confidence 011 1111113456999999999885522 233567899999973 222233356677778887
Q ss_pred cceeeee
Q psy4579 360 GTYNCYL 366 (368)
Q Consensus 360 ~w~p~~~ 366 (368)
.+++.-.
T Consensus 221 s~~~~t~ 227 (933)
T KOG2114|consen 221 SFSDGTY 227 (933)
T ss_pred ecCCCCc
Confidence 7776543
|
|
| >COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.036 Score=50.01 Aligned_cols=158 Identities=11% Similarity=0.097 Sum_probs=81.2
Q ss_pred cccCceeeEecCCcccccCCCCccccccCcceeeeccccCCCCCcEEEEEEecCCCcc-------------ccccCCccc
Q psy4579 39 LEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNEDA-------------QFDASNYDT 105 (368)
Q Consensus 39 ~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-------------~~~~~~~~~ 105 (368)
-.||+..++|+|.|++|++.-..+ |.+|...... ..+.. .+..+..+.+.+... ....+.+
T Consensus 31 ~~~p~~~~~~SP~G~~l~~~~~~~-V~~~~g~~~~-~l~~~--~~~~V~~~~fSP~~kYL~tw~~~pi~~pe~e~sp~-- 104 (561)
T COG5354 31 ENWPVAYVSESPLGTYLFSEHAAG-VECWGGPSKA-KLVRF--RHPDVKYLDFSPNEKYLVTWSREPIIEPEIEISPF-- 104 (561)
T ss_pred cCcchhheeecCcchheehhhccc-eEEccccchh-heeee--ecCCceecccCcccceeeeeccCCccChhhccCCc--
Confidence 469999999999999998754443 3344332111 00000 001122222222111 1111111
Q ss_pred CCCCcccCCCCCe-eeeeccccCCCC--ce-eeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccce
Q psy4579 106 DKGGNVQLPNEDA-QFDASNYDTDKG--GY-GLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVV 181 (368)
Q Consensus 106 ~~~g~i~i~~~~~-~~~~~~~~h~~~--v~-~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v 181 (368)
..+..+.+||..+ ..+..+..-..+ .+ -+.|+-+. .++|-- ....+.|+++ +..... .+...++ ...+
T Consensus 105 ~~~n~~~vwd~~sg~iv~sf~~~~q~~~~Wp~~k~s~~D-~y~ARv-v~~sl~i~e~-t~n~~~---~p~~~lr--~~gi 176 (561)
T COG5354 105 TSKNNVFVWDIASGMIVFSFNGISQPYLGWPVLKFSIDD-KYVARV-VGSSLYIHEI-TDNIEE---HPFKNLR--PVGI 176 (561)
T ss_pred cccCceeEEeccCceeEeeccccCCcccccceeeeeecc-hhhhhh-ccCeEEEEec-CCcccc---Cchhhcc--ccce
Confidence 1234789999875 444444444444 55 67888876 665544 4568999997 332110 1223333 1233
Q ss_pred ecceeeEEeCCC-CCeEEE-----eeCCCcEEEEECCC
Q psy4579 182 EVRYGLSWNPSL-NGYLLS-----ASDDHTICLWDINA 213 (368)
Q Consensus 182 ~~~~~i~~~p~~-~~~l~s-----~s~dg~i~iwd~~~ 213 (368)
. ...|+|.+ ...|+. .+.++++++|.+..
T Consensus 177 ~---dFsisP~~n~~~la~~tPEk~~kpa~~~i~sIp~ 211 (561)
T COG5354 177 L---DFSISPEGNHDELAYWTPEKLNKPAMVRILSIPK 211 (561)
T ss_pred e---eEEecCCCCCceEEEEccccCCCCcEEEEEEccC
Confidence 2 77888862 122222 35667777777753
|
|
| >KOG4640|consensus | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.0031 Score=58.16 Aligned_cols=75 Identities=19% Similarity=0.283 Sum_probs=62.1
Q ss_pred CCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEE
Q psy4579 129 KGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICL 208 (368)
Q Consensus 129 ~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~i 208 (368)
..|.-+.|+|.- .++|.+..+|.|.+..++-. -+.++.-|...++ -+++|.|| +++||.|-.||+|++
T Consensus 21 ~~i~~~ewnP~~-dLiA~~t~~gelli~R~n~q--------Rlwtip~p~~~v~--~sL~W~~D-GkllaVg~kdG~I~L 88 (665)
T KOG4640|consen 21 INIKRIEWNPKM-DLIATRTEKGELLIHRLNWQ--------RLWTIPIPGENVT--ASLCWRPD-GKLLAVGFKDGTIRL 88 (665)
T ss_pred cceEEEEEcCcc-chhheeccCCcEEEEEeccc--------eeEeccCCCCccc--eeeeecCC-CCEEEEEecCCeEEE
Confidence 456778999998 89999999999998888743 2455665555554 39999999 999999999999999
Q ss_pred EECCCCC
Q psy4579 209 WDINATP 215 (368)
Q Consensus 209 wd~~~~~ 215 (368)
-|..++.
T Consensus 89 ~Dve~~~ 95 (665)
T KOG4640|consen 89 HDVEKGG 95 (665)
T ss_pred EEccCCC
Confidence 9999874
|
|
| >KOG2114|consensus | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.048 Score=52.46 Aligned_cols=189 Identities=11% Similarity=0.131 Sum_probs=104.5
Q ss_pred CCCCcccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCCCc-----EEEEeCCCCCCCCcccccc--eeeecc-
Q psy4579 106 DKGGNVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHT-----ICLWDINATPKENRVIDAK--TIFTGH- 177 (368)
Q Consensus 106 ~~~g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~-----v~iwd~~~~~~~~~~~~~~--~~~~~h- 177 (368)
+++|.|.+.+..-+....++.+...+-..-|.-++.++|++.+.|+. ++||+++........ .+. .....|
T Consensus 42 t~~G~V~~Ln~s~~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~~n~sP-~c~~~~ri~~~~ 120 (933)
T KOG2114|consen 42 TADGRVVILNSSFQLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVDKNNSP-QCLYEHRIFTIK 120 (933)
T ss_pred eccccEEEecccceeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccCCCCCc-ceeeeeeeeccC
Confidence 45888888888777767777777773333444444368888877654 899999876432210 111 112222
Q ss_pred ----ccceecceeeEEeCCCCCeEEEeeCCCcEEEEE--CCCCCCCCccccceeeeecccccEeEEEEeeecccccCCCC
Q psy4579 178 ----TAVVEVRYGLSWNPSLNGYLLSASDDHTICLWD--INATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDE 251 (368)
Q Consensus 178 ----~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd--~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~ 251 (368)
..+++ +++.+.+ -..+|.|-.+|.|..+. +...... + ......-..+|+.+++.. ++
T Consensus 121 np~~~~p~s---~l~Vs~~-l~~Iv~Gf~nG~V~~~~GDi~RDrgs----r-~~~~~~~~~pITgL~~~~--------d~ 183 (933)
T KOG2114|consen 121 NPTNPSPAS---SLAVSED-LKTIVCGFTNGLVICYKGDILRDRGS----R-QDYSHRGKEPITGLALRS--------DG 183 (933)
T ss_pred CCCCCCcce---EEEEEcc-ccEEEEEecCcEEEEEcCcchhcccc----c-eeeeccCCCCceeeEEec--------CC
Confidence 33443 8888887 88999999999999883 2221110 0 111122356788888752 11
Q ss_pred ccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECC
Q psy4579 252 QNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYT 331 (368)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~ 331 (368)
+..+++++. . .+..+.+....+.......|-.+++|..|++..+.+++++ +.-+.+|+..
T Consensus 184 ~s~lFv~Tt---~---------------~V~~y~l~gr~p~~~~ld~~G~~lnCss~~~~t~qfIca~--~e~l~fY~sd 243 (933)
T KOG2114|consen 184 KSVLFVATT---E---------------QVMLYSLSGRTPSLKVLDNNGISLNCSSFSDGTYQFICAG--SEFLYFYDSD 243 (933)
T ss_pred ceeEEEEec---c---------------eeEEEEecCCCcceeeeccCCccceeeecCCCCccEEEec--CceEEEEcCC
Confidence 111222211 0 0111111101112222224566889999988774466553 4578888876
Q ss_pred C
Q psy4579 332 K 332 (368)
Q Consensus 332 ~ 332 (368)
.
T Consensus 244 ~ 244 (933)
T KOG2114|consen 244 G 244 (933)
T ss_pred C
Confidence 3
|
|
| >KOG2314|consensus | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.023 Score=51.83 Aligned_cols=90 Identities=16% Similarity=0.309 Sum_probs=56.6
Q ss_pred ccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCC-----------CcEEEEeCCCCCCCCcccccceeeecccc
Q psy4579 111 VQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDD-----------HTICLWDINATPKENRVIDAKTIFTGHTA 179 (368)
Q Consensus 111 i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~d-----------g~v~iwd~~~~~~~~~~~~~~~~~~~h~~ 179 (368)
|.+|--..--....+.|. .|.-+.|||.. ++|+|-+.. ..++|||+.++.. .+.|..-.+
T Consensus 233 I~lWGG~~f~r~~RF~Hp-~Vq~idfSP~E-kYLVT~s~~p~~~~~~d~e~~~l~IWDI~tG~l-------krsF~~~~~ 303 (698)
T KOG2314|consen 233 IALWGGESFDRIQRFYHP-GVQFIDFSPNE-KYLVTYSPEPIIVEEDDNEGQQLIIWDIATGLL-------KRSFPVIKS 303 (698)
T ss_pred eeeecCccHHHHHhccCC-CceeeecCCcc-ceEEEecCCccccCcccCCCceEEEEEccccch-------hcceeccCC
Confidence 445543321123344564 57889999997 999997631 5789999999863 233333111
Q ss_pred --ceecceeeEEeCCCCCeEEEeeCCCcEEEEECCC
Q psy4579 180 --VVEVRYGLSWNPSLNGYLLSASDDHTICLWDINA 213 (368)
Q Consensus 180 --~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~ 213 (368)
.+- --+.||.+ +.++|.-.. .+|.||+...
T Consensus 304 ~~~~W--P~frWS~D-dKy~Arm~~-~sisIyEtps 335 (698)
T KOG2314|consen 304 PYLKW--PIFRWSHD-DKYFARMTG-NSISIYETPS 335 (698)
T ss_pred Ccccc--ceEEeccC-CceeEEecc-ceEEEEecCc
Confidence 111 15789988 888887665 5678887654
|
|
| >TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.06 Score=47.82 Aligned_cols=52 Identities=15% Similarity=0.141 Sum_probs=39.7
Q ss_pred CCcccccCCCCceeeeeecCcccceeEEEEeCCCC-cEEEEecCCCeEEEEECCC
Q psy4579 279 GDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNP-CVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~-~~lasgs~Dg~i~iwd~~~ 332 (368)
+.+..+|..+++....+..+ ..+..++++|++. .++++...++.|.+.|...
T Consensus 279 ~~V~ViD~~t~kvi~~i~vG--~~~~~iavS~Dgkp~lyvtn~~s~~VsViD~~t 331 (352)
T TIGR02658 279 RFLFVVDAKTGKRLRKIELG--HEIDSINVSQDAKPLLYALSTGDKTLYIFDAET 331 (352)
T ss_pred CEEEEEECCCCeEEEEEeCC--CceeeEEECCCCCeEEEEeCCCCCcEEEEECcC
Confidence 34666777778887777654 4789999999997 5555555789999999976
|
This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome. |
| >COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.054 Score=46.81 Aligned_cols=189 Identities=12% Similarity=0.075 Sum_probs=101.5
Q ss_pred CCCcccCCCCCe----eeeeccccCCCCceeeEecCCCCCeeEEEeC---CCcEEEEeCCCCCCCCcccccceeeecccc
Q psy4579 107 KGGNVQLPNEDA----QFDASNYDTDKGGYGLSWNPSLNGYLLSASD---DHTICLWDINATPKENRVIDAKTIFTGHTA 179 (368)
Q Consensus 107 ~~g~i~i~~~~~----~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~---dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~ 179 (368)
.++-|.+|++++ .....+..+....+=|+|+|++ +.|.++.. +|.|-.|.+........ .+........
T Consensus 14 ~s~gI~v~~ld~~~g~l~~~~~v~~~~nptyl~~~~~~-~~LY~v~~~~~~ggvaay~iD~~~G~Lt---~ln~~~~~g~ 89 (346)
T COG2706 14 ESQGIYVFNLDTKTGELSLLQLVAELGNPTYLAVNPDQ-RHLYVVNEPGEEGGVAAYRIDPDDGRLT---FLNRQTLPGS 89 (346)
T ss_pred CCCceEEEEEeCcccccchhhhccccCCCceEEECCCC-CEEEEEEecCCcCcEEEEEEcCCCCeEE---EeeccccCCC
Confidence 345567776652 2233455677888899999998 77777764 47788887765311100 1111111112
Q ss_pred ceecceeeEEeCCCCCeEEEee-CCCcEEEEECCCCCCCCccccceeeeeccccc----------EeEEEEeeecccccC
Q psy4579 180 VVEVRYGLSWNPSLNGYLLSAS-DDHTICLWDINATPKENRVIDAKTIFTGHTAV----------VEDYSIHRLILGTHT 248 (368)
Q Consensus 180 ~v~~~~~i~~~p~~~~~l~s~s-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~----------v~~v~~~~~~~~~~~ 248 (368)
+.+ .++.+++ +.++++++ .-|.|.++-++....... ......|... +....+.|.
T Consensus 90 ~p~---yvsvd~~-g~~vf~AnY~~g~v~v~p~~~dG~l~~----~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~------ 155 (346)
T COG2706 90 PPC---YVSVDED-GRFVFVANYHSGSVSVYPLQADGSLQP----VVQVVKHTGSGPHERQESPHVHSANFTPD------ 155 (346)
T ss_pred CCe---EEEECCC-CCEEEEEEccCceEEEEEcccCCcccc----ceeeeecCCCCCCccccCCccceeeeCCC------
Confidence 223 7888998 77777775 568999998876432211 1111123332 444444431
Q ss_pred CCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeee--ecCcccceeEEEEeCCCCcEEEEecCCCeEE
Q psy4579 249 SDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEI--KINHEGEVNRARYMPQNPCVIATKTPSSDVL 326 (368)
Q Consensus 249 ~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~--~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~ 326 (368)
..++++..+. .-.+..++...|.+.... ...-...-.-+.|+|+++...+..=-+++|.
T Consensus 156 ---~~~l~v~DLG----------------~Dri~~y~~~dg~L~~~~~~~v~~G~GPRHi~FHpn~k~aY~v~EL~stV~ 216 (346)
T COG2706 156 ---GRYLVVPDLG----------------TDRIFLYDLDDGKLTPADPAEVKPGAGPRHIVFHPNGKYAYLVNELNSTVD 216 (346)
T ss_pred ---CCEEEEeecC----------------CceEEEEEcccCccccccccccCCCCCcceEEEcCCCcEEEEEeccCCEEE
Confidence 1122222110 011111222222221110 0012345677999999977666667899999
Q ss_pred EEECCC
Q psy4579 327 VFDYTK 332 (368)
Q Consensus 327 iwd~~~ 332 (368)
+|.+..
T Consensus 217 v~~y~~ 222 (346)
T COG2706 217 VLEYNP 222 (346)
T ss_pred EEEEcC
Confidence 999976
|
|
| >PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.25 Score=41.88 Aligned_cols=158 Identities=14% Similarity=0.177 Sum_probs=88.4
Q ss_pred eeEecC-CCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEEC
Q psy4579 133 GLSWNP-SLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDI 211 (368)
Q Consensus 133 ~l~~sp-~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~ 211 (368)
+..|.+ ++ .++++--..+.|..|+..++. ...+.... +. ++++... +..|+.+..++ +.++|+
T Consensus 4 gp~~d~~~g-~l~~~D~~~~~i~~~~~~~~~--------~~~~~~~~-~~----G~~~~~~-~g~l~v~~~~~-~~~~d~ 67 (246)
T PF08450_consen 4 GPVWDPRDG-RLYWVDIPGGRIYRVDPDTGE--------VEVIDLPG-PN----GMAFDRP-DGRLYVADSGG-IAVVDP 67 (246)
T ss_dssp EEEEETTTT-EEEEEETTTTEEEEEETTTTE--------EEEEESSS-EE----EEEEECT-TSEEEEEETTC-EEEEET
T ss_pred ceEEECCCC-EEEEEEcCCCEEEEEECCCCe--------EEEEecCC-Cc----eEEEEcc-CCEEEEEEcCc-eEEEec
Confidence 567888 55 788887789999999998763 22233222 44 7888843 35555555554 455588
Q ss_pred CCCCCCCccccceeeee--c-ccccEeEEEEeeecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCC
Q psy4579 212 NATPKENRVIDAKTIFT--G-HTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVS 288 (368)
Q Consensus 212 ~~~~~~~~~~~~~~~~~--~-~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 288 (368)
.++.. ..+.... . .....+++++.+ ...+|+...........- .|.+..++..
T Consensus 68 ~~g~~-----~~~~~~~~~~~~~~~~ND~~vd~----------~G~ly~t~~~~~~~~~~~--------~g~v~~~~~~- 123 (246)
T PF08450_consen 68 DTGKV-----TVLADLPDGGVPFNRPNDVAVDP----------DGNLYVTDSGGGGASGID--------PGSVYRIDPD- 123 (246)
T ss_dssp TTTEE-----EEEEEEETTCSCTEEEEEEEE-T----------TS-EEEEEECCBCTTCGG--------SEEEEEEETT-
T ss_pred CCCcE-----EEEeeccCCCcccCCCceEEEcC----------CCCEEEEecCCCcccccc--------ccceEEECCC-
Confidence 77621 1122221 1 234456666653 123555544221111100 0222222222
Q ss_pred CceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCC
Q psy4579 289 GKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 289 ~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
++..... ..-...+.++|+|++..++++-+..+.|..+++..
T Consensus 124 ~~~~~~~--~~~~~pNGi~~s~dg~~lyv~ds~~~~i~~~~~~~ 165 (246)
T PF08450_consen 124 GKVTVVA--DGLGFPNGIAFSPDGKTLYVADSFNGRIWRFDLDA 165 (246)
T ss_dssp SEEEEEE--EEESSEEEEEEETTSSEEEEEETTTTEEEEEEEET
T ss_pred CeEEEEe--cCcccccceEECCcchheeecccccceeEEEeccc
Confidence 2322221 23456789999999977777888999999999864
|
These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A .... |
| >PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.0044 Score=37.07 Aligned_cols=32 Identities=16% Similarity=0.423 Sum_probs=28.8
Q ss_pred CCCCceeeEecCCCCCeeEEEeCCCcEEEEeCC
Q psy4579 127 TDKGGYGLSWNPSLNGYLLSASDDHTICLWDIN 159 (368)
Q Consensus 127 h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~ 159 (368)
....|.+++|||.. ++||.|..||.|.++.++
T Consensus 10 l~~~v~~~~w~P~m-dLiA~~t~~g~v~v~Rl~ 41 (47)
T PF12894_consen 10 LPSRVSCMSWCPTM-DLIALGTEDGEVLVYRLN 41 (47)
T ss_pred CCCcEEEEEECCCC-CEEEEEECCCeEEEEECC
Confidence 34579999999998 899999999999999984
|
|
| >KOG1645|consensus | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.02 Score=50.15 Aligned_cols=85 Identities=20% Similarity=0.258 Sum_probs=66.2
Q ss_pred cceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeeecccccCC
Q psy4579 170 AKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTS 249 (368)
Q Consensus 170 ~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~ 249 (368)
+...+.+|...|+ +++|+|....++..++.+.+|+|.|+++.. ....
T Consensus 185 ssq~lp~~g~~Ir---dlafSp~~~GLl~~asl~nkiki~dlet~~-------~vss----------------------- 231 (463)
T KOG1645|consen 185 SSQILPGEGSFIR---DLAFSPFNEGLLGLASLGNKIKIMDLETSC-------VVSS----------------------- 231 (463)
T ss_pred hhhcccccchhhh---hhccCccccceeeeeccCceEEEEecccce-------eeeh-----------------------
Confidence 3456677888887 999999866689999999999999998741 0000
Q ss_pred CCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEE
Q psy4579 250 DEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFD 329 (368)
Q Consensus 250 d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd 329 (368)
. ..| ..+++++|.-+..+.|..|-..|.|.|||
T Consensus 232 ---------------------------------------------y-~a~-~~~wSC~wDlde~h~IYaGl~nG~VlvyD 264 (463)
T KOG1645|consen 232 ---------------------------------------------Y-IAY-NQIWSCCWDLDERHVIYAGLQNGMVLVYD 264 (463)
T ss_pred ---------------------------------------------e-ecc-CCceeeeeccCCcceeEEeccCceEEEEE
Confidence 0 134 67888999988878888999999999999
Q ss_pred CCCCC
Q psy4579 330 YTKHP 334 (368)
Q Consensus 330 ~~~~~ 334 (368)
++...
T Consensus 265 ~R~~~ 269 (463)
T KOG1645|consen 265 MRQPE 269 (463)
T ss_pred ccCCC
Confidence 98754
|
|
| >COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown] | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.094 Score=47.15 Aligned_cols=97 Identities=12% Similarity=0.155 Sum_probs=74.5
Q ss_pred ccCCCCceeeEecCCCCCeeEEEeCCC-cEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCC
Q psy4579 125 YDTDKGGYGLSWNPSLNGYLLSASDDH-TICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDD 203 (368)
Q Consensus 125 ~~h~~~v~~l~~sp~~~~~lasg~~dg-~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~d 203 (368)
.+|...|.-..+.-++ .-++.|..|| .+-|+|..++. ...+...-+.|. ++..+|+ +.+++.+...
T Consensus 356 v~~~~~VrY~r~~~~~-e~~vigt~dgD~l~iyd~~~~e--------~kr~e~~lg~I~---av~vs~d-GK~~vvaNdr 422 (668)
T COG4946 356 VGKKGGVRYRRIQVDP-EGDVIGTNDGDKLGIYDKDGGE--------VKRIEKDLGNIE---AVKVSPD-GKKVVVANDR 422 (668)
T ss_pred cCCCCceEEEEEccCC-cceEEeccCCceEEEEecCCce--------EEEeeCCccceE---EEEEcCC-CcEEEEEcCc
Confidence 4567778877888776 6889999999 89999998873 355555556674 9999998 8999999999
Q ss_pred CcEEEEECCCCCCCCccccceeeeecccccEeEEEEee
Q psy4579 204 HTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR 241 (368)
Q Consensus 204 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~ 241 (368)
..+.+.|+.++. +...-+....-|..++|++
T Consensus 423 ~el~vididngn-------v~~idkS~~~lItdf~~~~ 453 (668)
T COG4946 423 FELWVIDIDNGN-------VRLIDKSEYGLITDFDWHP 453 (668)
T ss_pred eEEEEEEecCCC-------eeEecccccceeEEEEEcC
Confidence 999999999984 2222334556788888886
|
|
| >TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.12 Score=46.96 Aligned_cols=62 Identities=15% Similarity=0.103 Sum_probs=37.8
Q ss_pred CeeEEEeCCCcEEEEeCCCCCCCCcccccceeee-----cccc-----ceecceeeEEeCCCCCeEEEeeCCCcEEEEEC
Q psy4579 142 GYLLSASDDHTICLWDINATPKENRVIDAKTIFT-----GHTA-----VVEVRYGLSWNPSLNGYLLSASDDHTICLWDI 211 (368)
Q Consensus 142 ~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~-----~h~~-----~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~ 211 (368)
..++.+..+|.+..+|.+++... .... +... .+. .+... . +..++.++.+|.+..+|.
T Consensus 191 ~~v~~~~~~g~v~ald~~tG~~~-------W~~~~~~~~g~~~~~~~~~~~--~~p~~--~-~~~vy~~~~~g~l~a~d~ 258 (377)
T TIGR03300 191 GGVLVGFAGGKLVALDLQTGQPL-------WEQRVALPKGRTELERLVDVD--GDPVV--D-GGQVYAVSYQGRVAALDL 258 (377)
T ss_pred CEEEEECCCCEEEEEEccCCCEe-------eeeccccCCCCCchhhhhccC--CccEE--E-CCEEEEEEcCCEEEEEEC
Confidence 46777888899999999877421 1111 0000 000 01111 2 467888889999999999
Q ss_pred CCCC
Q psy4579 212 NATP 215 (368)
Q Consensus 212 ~~~~ 215 (368)
.+++
T Consensus 259 ~tG~ 262 (377)
T TIGR03300 259 RSGR 262 (377)
T ss_pred CCCc
Confidence 8773
|
Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ. |
| >KOG3617|consensus | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.012 Score=56.37 Aligned_cols=107 Identities=13% Similarity=0.205 Sum_probs=69.1
Q ss_pred eeEEeCCCCCeEEEee----CCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee--ecccccCCCCccceEEEE
Q psy4579 186 GLSWNPSLNGYLLSAS----DDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LILGTHTSDEQNHLLIAS 259 (368)
Q Consensus 186 ~i~~~p~~~~~l~s~s----~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~d~~~~~~~~~ 259 (368)
-.+|+|. ..+|+.++ ..|+|.||- .++.+...+. ..-.+.+++||| .+++.+-..+...+|...
T Consensus 20 i~SWHPs-ePlfAVA~fS~er~GSVtIfa-dtGEPqr~Vt--------~P~hatSLCWHpe~~vLa~gwe~g~~~v~~~~ 89 (1416)
T KOG3617|consen 20 ISSWHPS-EPLFAVASFSPERGGSVTIFA-DTGEPQRDVT--------YPVHATSLCWHPEEFVLAQGWEMGVSDVQKTN 89 (1416)
T ss_pred ccccCCC-CceeEEEEecCCCCceEEEEe-cCCCCCcccc--------cceehhhhccChHHHHHhhccccceeEEEecC
Confidence 5689998 88888876 467899983 4443221111 112245689997 445554443333333211
Q ss_pred eecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCC
Q psy4579 260 VQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 260 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
+.+ ..+....|+.+|..+.|+|+| ..++|+..=|.+.+|.+..
T Consensus 90 ----------------------------~~e-~htv~~th~a~i~~l~wS~~G-~~l~t~d~~g~v~lwr~d~ 132 (1416)
T KOG3617|consen 90 ----------------------------TTE-THTVVETHPAPIQGLDWSHDG-TVLMTLDNPGSVHLWRYDV 132 (1416)
T ss_pred ----------------------------Cce-eeeeccCCCCCceeEEecCCC-CeEEEcCCCceeEEEEeee
Confidence 111 223334799999999999999 6777999999999998864
|
|
| >PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.074 Score=38.22 Aligned_cols=68 Identities=21% Similarity=0.164 Sum_probs=49.1
Q ss_pred ceeeEe---cCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEE
Q psy4579 131 GYGLSW---NPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTIC 207 (368)
Q Consensus 131 v~~l~~---sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~ 207 (368)
|++|++ .-+|.+.|+.|+.|..||+|+-.. .+..+..+...+ +++-.. ...|+.+-.+|+|-
T Consensus 2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~e---------~~~Ei~e~~~v~----~L~~~~--~~~F~Y~l~NGTVG 66 (111)
T PF14783_consen 2 VTALCLFDFDGDGENELLVGSDDFEIRVFKGDE---------IVAEITETDKVT----SLCSLG--GGRFAYALANGTVG 66 (111)
T ss_pred eeEEEEEecCCCCcceEEEecCCcEEEEEeCCc---------EEEEEecccceE----EEEEcC--CCEEEEEecCCEEE
Confidence 445544 445668999999999999998653 345555544433 666655 57799999999999
Q ss_pred EEECCC
Q psy4579 208 LWDINA 213 (368)
Q Consensus 208 iwd~~~ 213 (368)
+|+-..
T Consensus 67 vY~~~~ 72 (111)
T PF14783_consen 67 VYDRSQ 72 (111)
T ss_pred EEeCcc
Confidence 998644
|
|
| >PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.012 Score=35.21 Aligned_cols=32 Identities=25% Similarity=0.340 Sum_probs=28.5
Q ss_pred cccceeEEEEeCCCCcEEEEecCCCeEEEEECC
Q psy4579 299 HEGEVNRARYMPQNPCVIATKTPSSDVLVFDYT 331 (368)
Q Consensus 299 h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~ 331 (368)
-...|.+++|+|.. .+||.|+.||.|.++.++
T Consensus 10 l~~~v~~~~w~P~m-dLiA~~t~~g~v~v~Rl~ 41 (47)
T PF12894_consen 10 LPSRVSCMSWCPTM-DLIALGTEDGEVLVYRLN 41 (47)
T ss_pred CCCcEEEEEECCCC-CEEEEEECCCeEEEEECC
Confidence 34569999999999 699999999999999985
|
|
| >KOG2314|consensus | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.06 Score=49.26 Aligned_cols=44 Identities=20% Similarity=0.340 Sum_probs=34.0
Q ss_pred hhhhhhhhhhcCcchheeecc---cccccCceeeEecCCcccccCCCCc
Q psy4579 16 INEEYKIWKKNTPFLYDLVMT---HALEWPSLTAQWLPDVTSVQLPNED 61 (368)
Q Consensus 16 ~~~~~~~w~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~l~~~~~~ 61 (368)
..+..-||..-++.+.+.+.. ..+.||+ +.|+-|.+++|--..+
T Consensus 280 e~~~l~IWDI~tG~lkrsF~~~~~~~~~WP~--frWS~DdKy~Arm~~~ 326 (698)
T KOG2314|consen 280 EGQQLIIWDIATGLLKRSFPVIKSPYLKWPI--FRWSHDDKYFARMTGN 326 (698)
T ss_pred CCceEEEEEccccchhcceeccCCCccccce--EEeccCCceeEEeccc
Confidence 345567899999988777765 5678988 7999999998865444
|
|
| >KOG1920|consensus | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.21 Score=50.21 Aligned_cols=70 Identities=14% Similarity=0.155 Sum_probs=53.2
Q ss_pred CCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEE
Q psy4579 128 DKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTIC 207 (368)
Q Consensus 128 ~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~ 207 (368)
++.|.++.|..+. +.++.+..+|.|.+-|.++.. ......-...|. +++|+|+ ...++-.+.++++.
T Consensus 68 d~~i~s~~fl~d~-~~i~v~~~~G~iilvd~et~~--------~eivg~vd~GI~---aaswS~D-ee~l~liT~~~tll 134 (1265)
T KOG1920|consen 68 DDEIVSVQFLADT-NSICVITALGDIILVDPETLE--------LEIVGNVDNGIS---AASWSPD-EELLALITGRQTLL 134 (1265)
T ss_pred CcceEEEEEeccc-ceEEEEecCCcEEEEcccccc--------eeeeeeccCceE---EEeecCC-CcEEEEEeCCcEEE
Confidence 3678999999987 788888899999999887763 222233345564 9999999 88888888888876
Q ss_pred EEE
Q psy4579 208 LWD 210 (368)
Q Consensus 208 iwd 210 (368)
+-+
T Consensus 135 ~mT 137 (1265)
T KOG1920|consen 135 FMT 137 (1265)
T ss_pred EEe
Confidence 654
|
|
| >KOG1275|consensus | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.068 Score=51.87 Aligned_cols=148 Identities=16% Similarity=0.145 Sum_probs=93.1
Q ss_pred CCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCcc
Q psy4579 141 NGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRV 220 (368)
Q Consensus 141 ~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~ 220 (368)
+..++-|+....+..+|+++.+. .+...-..+.+. -+.. + +..+.+|...|+|.+-|.++-
T Consensus 147 ~~~~i~Gg~Q~~li~~Dl~~~~e-------~r~~~v~a~~v~---imR~--N-nr~lf~G~t~G~V~LrD~~s~------ 207 (1118)
T KOG1275|consen 147 PSTLIMGGLQEKLIHIDLNTEKE-------TRTTNVSASGVT---IMRY--N-NRNLFCGDTRGTVFLRDPNSF------ 207 (1118)
T ss_pred Ccceeecchhhheeeeeccccee-------eeeeeccCCceE---EEEe--c-CcEEEeecccceEEeecCCcC------
Confidence 35677788777888889988642 222222222342 3443 2 788999999999999999886
Q ss_pred ccceeeeecccccEeEEEEeeecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcc
Q psy4579 221 IDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHE 300 (368)
Q Consensus 221 ~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~ 300 (368)
+.++++..|++.|.+++.+.+++.+++-....+.... +..+.+||++.-+.+..+. -+.
T Consensus 208 -~~iht~~aHs~siSDfDv~GNlLitCG~S~R~~~l~~-------------------D~FvkVYDLRmmral~PI~-~~~ 266 (1118)
T KOG1275|consen 208 -ETIHTFDAHSGSISDFDVQGNLLITCGYSMRRYNLAM-------------------DPFVKVYDLRMMRALSPIQ-FPY 266 (1118)
T ss_pred -ceeeeeeccccceeeeeccCCeEEEeecccccccccc-------------------cchhhhhhhhhhhccCCcc-ccc
Confidence 5688999999999999988766655543221111100 0113344444444333222 122
Q ss_pred cceeEEEEeCCCCcEEEEecCCCeEEEEE
Q psy4579 301 GEVNRARYMPQNPCVIATKTPSSDVLVFD 329 (368)
Q Consensus 301 ~~i~~~~~~p~~~~~lasgs~Dg~i~iwd 329 (368)
+ -.-+.|+|.-...++.+|..|...+-|
T Consensus 267 ~-P~flrf~Psl~t~~~V~S~sGq~q~vd 294 (1118)
T KOG1275|consen 267 G-PQFLRFHPSLTTRLAVTSQSGQFQFVD 294 (1118)
T ss_pred C-chhhhhcccccceEEEEecccceeecc
Confidence 2 245778887666777778888888888
|
|
| >PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.19 Score=49.34 Aligned_cols=103 Identities=17% Similarity=0.201 Sum_probs=61.3
Q ss_pred CeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccc
Q psy4579 142 GYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVI 221 (368)
Q Consensus 142 ~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 221 (368)
..-..|-.+..+..||.+-..... .....+.+. .....+ |++-.. ..+||.||.+|.||+||-. +.
T Consensus 543 e~tflGls~n~lfriDpR~~~~k~-v~~~~k~Y~-~~~~Fs---~~aTt~--~G~iavgs~~G~IRLyd~~-g~------ 608 (794)
T PF08553_consen 543 EQTFLGLSDNSLFRIDPRLSGNKL-VDSQSKQYS-SKNNFS---CFATTE--DGYIAVGSNKGDIRLYDRL-GK------ 608 (794)
T ss_pred CceEEEECCCceEEeccCCCCCce-eeccccccc-cCCCce---EEEecC--CceEEEEeCCCcEEeeccc-ch------
Confidence 355677788899999998643110 000011111 122222 444433 7889999999999999943 22
Q ss_pred cceeeeecccccEeEEEEee---ecccccCCCCccceEEEEeec
Q psy4579 222 DAKTIFTGHTAVVEDYSIHR---LILGTHTSDEQNHLLIASVQL 262 (368)
Q Consensus 222 ~~~~~~~~~~~~v~~v~~~~---~~~~~~~~d~~~~~~~~~~~~ 262 (368)
+....+.+-..+|..|+... .+++++. .++++....+
T Consensus 609 ~AKT~lp~lG~pI~~iDvt~DGkwilaTc~----tyLlLi~t~~ 648 (794)
T PF08553_consen 609 RAKTALPGLGDPIIGIDVTADGKWILATCK----TYLLLIDTLI 648 (794)
T ss_pred hhhhcCCCCCCCeeEEEecCCCcEEEEeec----ceEEEEEEee
Confidence 23455667778998888763 4566654 4555555443
|
Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ]. |
| >KOG2079|consensus | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.02 Score=56.26 Aligned_cols=93 Identities=19% Similarity=0.319 Sum_probs=63.5
Q ss_pred CCcccCCCCCeeee--eccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecce
Q psy4579 108 GGNVQLPNEDAQFD--ASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRY 185 (368)
Q Consensus 108 ~g~i~i~~~~~~~~--~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 185 (368)
.|-+...+..+... ..-..-+.+|++++|+.+| ..++.|-.+|.|.+||+..++ +.+.+..|..+.+.+.
T Consensus 108 ~ghvl~~d~~~nL~~~~~ne~v~~~Vtsvafn~dg-~~l~~G~~~G~V~v~D~~~~k-------~l~~i~e~~ap~t~vi 179 (1206)
T KOG2079|consen 108 HGHVLLSDMTGNLGPLHQNERVQGPVTSVAFNQDG-SLLLAGLGDGHVTVWDMHRAK-------ILKVITEHGAPVTGVI 179 (1206)
T ss_pred chhhhhhhhhcccchhhcCCccCCcceeeEecCCC-ceeccccCCCcEEEEEccCCc-------ceeeeeecCCccceEE
Confidence 44455544444322 2223356899999999999 999999999999999998864 5566666666654223
Q ss_pred eeEEeCCCCCeEEEeeCCCcEEEEEC
Q psy4579 186 GLSWNPSLNGYLLSASDDHTICLWDI 211 (368)
Q Consensus 186 ~i~~~p~~~~~l~s~s~dg~i~iwd~ 211 (368)
.+.|..+ +..++++..-|. +|.+
T Consensus 180 ~v~~t~~-nS~llt~D~~Gs--f~~l 202 (1206)
T KOG2079|consen 180 FVGRTSQ-NSKLLTSDTGGS--FWKL 202 (1206)
T ss_pred EEEEeCC-CcEEEEccCCCc--eEEE
Confidence 5555555 567888887776 5543
|
|
| >KOG3621|consensus | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.018 Score=54.04 Aligned_cols=101 Identities=13% Similarity=0.118 Sum_probs=73.5
Q ss_pred CCCcccCCCCCeeeeecccc--CCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecc
Q psy4579 107 KGGNVQLPNEDAQFDASNYD--TDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVR 184 (368)
Q Consensus 107 ~~g~i~i~~~~~~~~~~~~~--h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~ 184 (368)
.-|.+.+++..+........ -.+.+..+..+++. .++|.|+..|.|.++-++......... ....-+.|...|+
T Consensus 53 S~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e-~lvAagt~~g~V~v~ql~~~~p~~~~~-~t~~d~~~~~rVT-- 128 (726)
T KOG3621|consen 53 SAGSVYLYNRHTGEMRKLKNEGATGITCVRSVSSVE-YLVAAGTASGRVSVFQLNKELPRDLDY-VTPCDKSHKCRVT-- 128 (726)
T ss_pred ccceEEEEecCchhhhcccccCccceEEEEEecchh-HhhhhhcCCceEEeehhhccCCCccee-eccccccCCceEE--
Confidence 36888888887766555443 55566777888886 899999999999999988743211100 0111223677887
Q ss_pred eeeEEeCCCCCeEEEeeCCCcEEEEECCC
Q psy4579 185 YGLSWNPSLNGYLLSASDDHTICLWDINA 213 (368)
Q Consensus 185 ~~i~~~p~~~~~l~s~s~dg~i~iwd~~~ 213 (368)
+++|+++ +..+++|...|+|.+-.+..
T Consensus 129 -al~Ws~~-~~k~ysGD~~Gkv~~~~L~s 155 (726)
T KOG3621|consen 129 -ALEWSKN-GMKLYSGDSQGKVVLTELDS 155 (726)
T ss_pred -EEEeccc-ccEEeecCCCceEEEEEech
Confidence 9999999 99999999999999887766
|
|
| >PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals | Back alignment and domain information |
|---|
Probab=95.83 E-value=1.1 Score=40.88 Aligned_cols=79 Identities=11% Similarity=0.162 Sum_probs=52.7
Q ss_pred CceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCC-----c-------------------------------cccccee
Q psy4579 130 GGYGLSWNPSLNGYLLSASDDHTICLWDINATPKEN-----R-------------------------------VIDAKTI 173 (368)
Q Consensus 130 ~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~-----~-------------------------------~~~~~~~ 173 (368)
.|+.+.|.++. .-||.|...|.|-||.....+... . -+.|...
T Consensus 3 ~v~~vs~a~~t-~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~P~~l 81 (395)
T PF08596_consen 3 SVTHVSFAPET-LELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFLPLTL 81 (395)
T ss_dssp -EEEEEEETTT-TEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEEEEEE
T ss_pred eEEEEEecCCC-ceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccCchhh
Confidence 57889999987 889999999999998765432111 0 0113334
Q ss_pred eeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCC
Q psy4579 174 FTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINAT 214 (368)
Q Consensus 174 ~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~ 214 (368)
+....++|+ +++.+ + -.++|.|..+|.+.|.|+|..
T Consensus 82 ~~~~~g~vt---al~~S-~-iGFvaigy~~G~l~viD~RGP 117 (395)
T PF08596_consen 82 LDAKQGPVT---ALKNS-D-IGFVAIGYESGSLVVIDLRGP 117 (395)
T ss_dssp E---S-SEE---EEEE--B-TSEEEEEETTSEEEEEETTTT
T ss_pred eeccCCcEe---EEecC-C-CcEEEEEecCCcEEEEECCCC
Confidence 445578886 88876 3 789999999999999999875
|
The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A. |
| >KOG4640|consensus | Back alignment and domain information |
|---|
Probab=95.71 E-value=0.034 Score=51.56 Aligned_cols=55 Identities=20% Similarity=0.147 Sum_probs=41.9
Q ss_pred CCCcccCCCCCeeeeeccccCCCCce-eeEecCCCCCeeEEEeCCCcEEEEeCCCCC
Q psy4579 107 KGGNVQLPNEDAQFDASNYDTDKGGY-GLSWNPSLNGYLLSASDDHTICLWDINATP 162 (368)
Q Consensus 107 ~~g~i~i~~~~~~~~~~~~~h~~~v~-~l~~sp~~~~~lasg~~dg~v~iwd~~~~~ 162 (368)
.+|.+.+...+-+.+-++--|...++ +++|.|+| +.||.|-.||+|++.|++++.
T Consensus 40 ~~gelli~R~n~qRlwtip~p~~~v~~sL~W~~DG-kllaVg~kdG~I~L~Dve~~~ 95 (665)
T KOG4640|consen 40 EKGELLIHRLNWQRLWTIPIPGENVTASLCWRPDG-KLLAVGFKDGTIRLHDVEKGG 95 (665)
T ss_pred cCCcEEEEEeccceeEeccCCCCccceeeeecCCC-CEEEEEecCCeEEEEEccCCC
Confidence 35666655554444444444667777 99999999 999999999999999999874
|
|
| >PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex | Back alignment and domain information |
|---|
Probab=95.61 E-value=0.72 Score=42.39 Aligned_cols=50 Identities=16% Similarity=0.247 Sum_probs=37.4
Q ss_pred cccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCC
Q psy4579 110 NVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINAT 161 (368)
Q Consensus 110 ~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~ 161 (368)
.|.+++..|+.+.+..=-.+.|-++.|+.+ ..|+.-..||.++++|+...
T Consensus 62 ~I~iys~sG~ll~~i~w~~~~iv~~~wt~~--e~LvvV~~dG~v~vy~~~G~ 111 (410)
T PF04841_consen 62 SIQIYSSSGKLLSSIPWDSGRIVGMGWTDD--EELVVVQSDGTVRVYDLFGE 111 (410)
T ss_pred EEEEECCCCCEeEEEEECCCCEEEEEECCC--CeEEEEEcCCEEEEEeCCCc
Confidence 588888887665543222288999999986 46777789999999998643
|
Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm |
| >PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A | Back alignment and domain information |
|---|
Probab=95.52 E-value=0.8 Score=38.31 Aligned_cols=97 Identities=11% Similarity=0.023 Sum_probs=55.2
Q ss_pred CCCcccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCccccccee-eeccccc--eec
Q psy4579 107 KGGNVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTI-FTGHTAV--VEV 183 (368)
Q Consensus 107 ~~g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~-~~~h~~~--v~~ 183 (368)
.++.+..++.....+...+.-.+.+...... .+ ..++.++.|+.+..+|..+++. ... ....... +.
T Consensus 44 ~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~-~~-~~v~v~~~~~~l~~~d~~tG~~-------~W~~~~~~~~~~~~~- 113 (238)
T PF13360_consen 44 GDGNLYALDAKTGKVLWRFDLPGPISGAPVV-DG-GRVYVGTSDGSLYALDAKTGKV-------LWSIYLTSSPPAGVR- 113 (238)
T ss_dssp TTSEEEEEETTTSEEEEEEECSSCGGSGEEE-ET-TEEEEEETTSEEEEEETTTSCE-------EEEEEE-SSCTCSTB-
T ss_pred CCCEEEEEECCCCCEEEEeeccccccceeee-cc-cccccccceeeeEecccCCcce-------eeeeccccccccccc-
Confidence 4677888886432333222223443333222 23 5667777888999999888752 233 1211110 10
Q ss_pred ceeeEEeCCCCCeEEEeeCCCcEEEEECCCCC
Q psy4579 184 RYGLSWNPSLNGYLLSASDDHTICLWDINATP 215 (368)
Q Consensus 184 ~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~ 215 (368)
........ ++.++.+..++.|..+|++++.
T Consensus 114 -~~~~~~~~-~~~~~~~~~~g~l~~~d~~tG~ 143 (238)
T PF13360_consen 114 -SSSSPAVD-GDRLYVGTSSGKLVALDPKTGK 143 (238)
T ss_dssp ---SEEEEE-TTEEEEEETCSEEEEEETTTTE
T ss_pred -cccCceEe-cCEEEEEeccCcEEEEecCCCc
Confidence 12233333 6778888889999999999883
|
... |
| >PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators [] | Back alignment and domain information |
|---|
Probab=95.45 E-value=1.1 Score=37.88 Aligned_cols=178 Identities=14% Similarity=0.178 Sum_probs=82.0
Q ss_pred cccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCccccccee--eeccccceecceeeEEeCCCCCeEEEee
Q psy4579 124 NYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTI--FTGHTAVVEVRYGLSWNPSLNGYLLSAS 201 (368)
Q Consensus 124 ~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~--~~~h~~~v~~~~~i~~~p~~~~~l~s~s 201 (368)
+-+-.+.++.|+|+|+...++++....+.|...+.+ ++ .++. +.+. +... +|++..+ +.++++--
T Consensus 17 l~g~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~~-G~-------vlr~i~l~g~-~D~E---gI~y~g~-~~~vl~~E 83 (248)
T PF06977_consen 17 LPGILDELSGLTYNPDTGTLFAVQDEPGEIYELSLD-GK-------VLRRIPLDGF-GDYE---GITYLGN-GRYVLSEE 83 (248)
T ss_dssp -TT--S-EEEEEEETTTTEEEEEETTTTEEEEEETT----------EEEEEE-SS--SSEE---EEEE-ST-TEEEEEET
T ss_pred CCCccCCccccEEcCCCCeEEEEECCCCEEEEEcCC-CC-------EEEEEeCCCC-CCce---eEEEECC-CEEEEEEc
Confidence 334456699999999864677777788888777764 32 2233 3333 3344 8888765 55565555
Q ss_pred CCCcEEEEECCCCCCCCccccceeee-----ecccccEeEEEEeeecccccCCCCccceEEEEeecCCcccccccccccC
Q psy4579 202 DDHTICLWDINATPKENRVIDAKTIF-----TGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDT 276 (368)
Q Consensus 202 ~dg~i~iwd~~~~~~~~~~~~~~~~~-----~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~ 276 (368)
.++.+.+.++.........-. ...+ ..+...+..++|++ ...+++++.-..| ...+.+....
T Consensus 84 r~~~L~~~~~~~~~~~~~~~~-~~~~~l~~~~~~N~G~EGla~D~---------~~~~L~v~kE~~P--~~l~~~~~~~- 150 (248)
T PF06977_consen 84 RDQRLYIFTIDDDTTSLDRAD-VQKISLGFPNKGNKGFEGLAYDP---------KTNRLFVAKERKP--KRLYEVNGFP- 150 (248)
T ss_dssp TTTEEEEEEE----TT--EEE-EEEEE---S---SS--EEEEEET---------TTTEEEEEEESSS--EEEEEEESTT-
T ss_pred CCCcEEEEEEeccccccchhh-ceEEecccccCCCcceEEEEEcC---------CCCEEEEEeCCCC--hhhEEEcccc-
Confidence 689999998854332111100 1111 12345577888875 1233333321000 0001111000
Q ss_pred CCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECC
Q psy4579 277 DKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYT 331 (368)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~ 331 (368)
....+...+ ... ... .......+.+++++|....+++.......|...|..
T Consensus 151 ~~~~~~~~~--~~~-~~~-~~~~~~d~S~l~~~p~t~~lliLS~es~~l~~~d~~ 201 (248)
T PF06977_consen 151 GGFDLFVSD--DQD-LDD-DKLFVRDLSGLSYDPRTGHLLILSDESRLLLELDRQ 201 (248)
T ss_dssp -SS--EEEE---HH-HH--HT--SS---EEEEETTTTEEEEEETTTTEEEEE-TT
T ss_pred Cccceeecc--ccc-ccc-ccceeccccceEEcCCCCeEEEEECCCCeEEEECCC
Confidence 000000000 000 000 012345689999999876888888889999999965
|
Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A. |
| >KOG3621|consensus | Back alignment and domain information |
|---|
Probab=95.37 E-value=0.096 Score=49.35 Aligned_cols=108 Identities=13% Similarity=0.119 Sum_probs=69.6
Q ss_pred ecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCC
Q psy4579 136 WNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATP 215 (368)
Q Consensus 136 ~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~ 215 (368)
++..+ .+++.|+.-|.+.+|+-..+... .....+-.+.+. .+..++. ..++|.|+..|.|.++-+....
T Consensus 41 ~dst~-~~l~~GsS~G~lyl~~R~~~~~~------~~~~~~~~~~~~---~~~vs~~-e~lvAagt~~g~V~v~ql~~~~ 109 (726)
T KOG3621|consen 41 VDATE-EYLAMGSSAGSVYLYNRHTGEMR------KLKNEGATGITC---VRSVSSV-EYLVAAGTASGRVSVFQLNKEL 109 (726)
T ss_pred eecCC-ceEEEecccceEEEEecCchhhh------cccccCccceEE---EEEecch-hHhhhhhcCCceEEeehhhccC
Confidence 34444 89999999999999997766421 122233344443 7778887 8889999999999999887643
Q ss_pred CCCccccceeee-ecccccEeEEEEeeecccccCCCCccceE
Q psy4579 216 KENRVIDAKTIF-TGHTAVVEDYSIHRLILGTHTSDEQNHLL 256 (368)
Q Consensus 216 ~~~~~~~~~~~~-~~~~~~v~~v~~~~~~~~~~~~d~~~~~~ 256 (368)
..... ....+ +.|...|++++|++...-..++|....+.
T Consensus 110 p~~~~--~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~ 149 (726)
T KOG3621|consen 110 PRDLD--YVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVV 149 (726)
T ss_pred CCcce--eeccccccCCceEEEEEecccccEEeecCCCceEE
Confidence 22211 11122 23788999999997554444444333333
|
|
| >PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins | Back alignment and domain information |
|---|
Probab=95.06 E-value=0.091 Score=30.47 Aligned_cols=29 Identities=14% Similarity=0.196 Sum_probs=25.3
Q ss_pred eeEEeCCCC--CeEEEeeCCCcEEEEECCCC
Q psy4579 186 GLSWNPSLN--GYLLSASDDHTICLWDINAT 214 (368)
Q Consensus 186 ~i~~~p~~~--~~l~s~s~dg~i~iwd~~~~ 214 (368)
++.|+|+.+ .+|+-+-.-|.|.|+|+++.
T Consensus 5 ~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~~ 35 (43)
T PF10313_consen 5 CCKFSPEPGGNDLLAWAEHQGRVHIVDTRSN 35 (43)
T ss_pred EEEeCCCCCcccEEEEEccCCeEEEEEcccC
Confidence 899998755 68999999999999999964
|
It contains a characteristic DLL sequence motif. |
| >PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment | Back alignment and domain information |
|---|
Probab=94.95 E-value=1.3 Score=41.10 Aligned_cols=140 Identities=14% Similarity=0.095 Sum_probs=62.4
Q ss_pred cccCceeeEecCCcccccCCCCccccccCcceeeeccccCCCCC--cEEEEEEecCCCccccccCCcccCCCCcccCC-C
Q psy4579 39 LEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQN--HLLIASVQLPNEDAQFDASNYDTDKGGNVQLP-N 115 (368)
Q Consensus 39 ~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~-~ 115 (368)
.+-+..++.++|+++.++++ ++|.+.+.. . ....+ .-.-....|...+ .+.... ...+|.++ +
T Consensus 31 ~~~~p~~ls~npngr~v~V~-g~geY~iyt-----~---~~~r~k~~G~g~~~vw~~~n-~yAv~~----~~~~I~I~kn 96 (443)
T PF04053_consen 31 CEIYPQSLSHNPNGRFVLVC-GDGEYEIYT-----A---LAWRNKAFGSGLSFVWSSRN-RYAVLE----SSSTIKIYKN 96 (443)
T ss_dssp -SS--SEEEE-TTSSEEEEE-ETTEEEEEE-----T---TTTEEEEEEE-SEEEE-TSS-EEEEE-----TTS-EEEEET
T ss_pred CCcCCeeEEECCCCCEEEEE-cCCEEEEEE-----c---cCCcccccCceeEEEEecCc-cEEEEE----CCCeEEEEEc
Confidence 44457789999999999885 444442221 0 01111 1111122233322 222211 24566663 3
Q ss_pred CCeeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCC
Q psy4579 116 EDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNG 195 (368)
Q Consensus 116 ~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~ 195 (368)
.+......+ .....+..|-. | .+|+..+.+ .|.+||..+++ .++.+... +|. .+.|+++ +.
T Consensus 97 ~~~~~~k~i-~~~~~~~~If~---G-~LL~~~~~~-~i~~yDw~~~~-------~i~~i~v~--~vk---~V~Ws~~-g~ 157 (443)
T PF04053_consen 97 FKNEVVKSI-KLPFSVEKIFG---G-NLLGVKSSD-FICFYDWETGK-------LIRRIDVS--AVK---YVIWSDD-GE 157 (443)
T ss_dssp TEE-TT------SS-EEEEE----S-SSEEEEETT-EEEEE-TTT---------EEEEESS---E-E---EEEE-TT-SS
T ss_pred CccccceEE-cCCcccceEEc---C-cEEEEECCC-CEEEEEhhHcc-------eeeEEecC--CCc---EEEEECC-CC
Confidence 332221111 11112222222 6 666666544 89999999874 34444422 365 8999998 88
Q ss_pred eEEEeeCCCcEEEEECC
Q psy4579 196 YLLSASDDHTICLWDIN 212 (368)
Q Consensus 196 ~l~s~s~dg~i~iwd~~ 212 (368)
+++-.+.+ .+.|++..
T Consensus 158 ~val~t~~-~i~il~~~ 173 (443)
T PF04053_consen 158 LVALVTKD-SIYILKYN 173 (443)
T ss_dssp EEEEE-S--SEEEEEE-
T ss_pred EEEEEeCC-eEEEEEec
Confidence 88888755 67777654
|
This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B. |
| >KOG1832|consensus | Back alignment and domain information |
|---|
Probab=94.68 E-value=0.037 Score=53.52 Aligned_cols=61 Identities=13% Similarity=0.165 Sum_probs=48.7
Q ss_pred ccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEe
Q psy4579 169 DAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIH 240 (368)
Q Consensus 169 ~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~ 240 (368)
.+.+.++.|+...+ |++|+-+ .++|+.|+..|.|+++++.++.. ......|...|+-+.-+
T Consensus 1092 r~w~~frd~~~~fT---c~afs~~-~~hL~vG~~~Geik~~nv~sG~~-------e~s~ncH~SavT~vePs 1152 (1516)
T KOG1832|consen 1092 RSWRSFRDETALFT---CIAFSGG-TNHLAVGSHAGEIKIFNVSSGSM-------EESVNCHQSAVTLVEPS 1152 (1516)
T ss_pred ccchhhhcccccee---eEEeecC-CceEEeeeccceEEEEEccCccc-------ccccccccccccccccc
Confidence 35677888888776 9999988 89999999999999999998843 34556688777766543
|
|
| >PRK02888 nitrous-oxide reductase; Validated | Back alignment and domain information |
|---|
Probab=94.65 E-value=0.19 Score=47.71 Aligned_cols=101 Identities=13% Similarity=0.099 Sum_probs=67.2
Q ss_pred CCcccCCCCCe-----eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCC-ccccc----ceeeecc
Q psy4579 108 GGNVQLPNEDA-----QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKEN-RVIDA----KTIFTGH 177 (368)
Q Consensus 108 ~g~i~i~~~~~-----~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~-~~~~~----~~~~~~h 177 (368)
++.|.+.|... ........-.+....++++|+|...++++..+.+|.|.|+.+.+.-. ..+++ .....--
T Consensus 295 gn~V~VID~~t~~~~~~~v~~yIPVGKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~~~~~~~~vvaevevG 374 (635)
T PRK02888 295 GSKVPVVDGRKAANAGSALTRYVPVPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDGKIKPRDAVVAEPELG 374 (635)
T ss_pred CCEEEEEECCccccCCcceEEEEECCCCccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhccCCccceEEEeeccC
Confidence 34566666554 33444555667788899999994455556679999999998754200 00011 1222223
Q ss_pred ccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCC
Q psy4579 178 TAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINA 213 (368)
Q Consensus 178 ~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~ 213 (368)
.+++ ..+|.++ ++...|-..|..|..||+..
T Consensus 375 lGPL----HTaFDg~-G~aytslf~dsqv~kwn~~~ 405 (635)
T PRK02888 375 LGPL----HTAFDGR-GNAYTTLFLDSQIVKWNIEA 405 (635)
T ss_pred CCcc----eEEECCC-CCEEEeEeecceeEEEehHH
Confidence 4454 7889887 78888889999999999876
|
|
| >PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A | Back alignment and domain information |
|---|
Probab=94.51 E-value=2.4 Score=35.36 Aligned_cols=94 Identities=16% Similarity=0.128 Sum_probs=53.5
Q ss_pred CCcccCCCCCeeeeeccccCCCCceeeE--ecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecce
Q psy4579 108 GGNVQLPNEDAQFDASNYDTDKGGYGLS--WNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRY 185 (368)
Q Consensus 108 ~g~i~i~~~~~~~~~~~~~h~~~v~~l~--~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 185 (368)
+|.|..+|.................... ..+++ ..+++++.++.+..||..+++ ....+.. ..++. .
T Consensus 2 ~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~l~~~d~~tG~-------~~W~~~~-~~~~~--~ 70 (238)
T PF13360_consen 2 DGTLSALDPRTGKELWSYDLGPGIGGPVATAVPDG-GRVYVASGDGNLYALDAKTGK-------VLWRFDL-PGPIS--G 70 (238)
T ss_dssp TSEEEEEETTTTEEEEEEECSSSCSSEEETEEEET-TEEEEEETTSEEEEEETTTSE-------EEEEEEC-SSCGG--S
T ss_pred CCEEEEEECCCCCEEEEEECCCCCCCccceEEEeC-CEEEEEcCCCEEEEEECCCCC-------EEEEeec-ccccc--c
Confidence 4666667763322222222221222222 23244 677777899999999998874 2333333 23321 1
Q ss_pred eeEEeCCCCCeEEEeeCCCcEEEEECCCCC
Q psy4579 186 GLSWNPSLNGYLLSASDDHTICLWDINATP 215 (368)
Q Consensus 186 ~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~ 215 (368)
.. ... +..++.++.++.+..+|.+++.
T Consensus 71 ~~--~~~-~~~v~v~~~~~~l~~~d~~tG~ 97 (238)
T PF13360_consen 71 AP--VVD-GGRVYVGTSDGSLYALDAKTGK 97 (238)
T ss_dssp GE--EEE-TTEEEEEETTSEEEEEETTTSC
T ss_pred ee--eec-ccccccccceeeeEecccCCcc
Confidence 21 112 5667777788899999988874
|
... |
| >PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=94.48 E-value=3 Score=36.22 Aligned_cols=35 Identities=14% Similarity=0.138 Sum_probs=28.0
Q ss_pred ccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCC
Q psy4579 300 EGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHP 334 (368)
Q Consensus 300 ~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~ 334 (368)
.+-|-+|++++++..+.+|+=.-+.+.+||.....
T Consensus 216 ~~Y~gSIa~~~~g~~ia~tsPrGg~~~~~d~~tg~ 250 (305)
T PF07433_consen 216 NGYIGSIAADRDGRLIAVTSPRGGRVAVWDAATGR 250 (305)
T ss_pred CCceEEEEEeCCCCEEEEECCCCCEEEEEECCCCC
Confidence 46788999999996666777778899999987643
|
|
| >PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins | Back alignment and domain information |
|---|
Probab=94.42 E-value=0.16 Score=29.50 Aligned_cols=32 Identities=19% Similarity=0.295 Sum_probs=26.4
Q ss_pred cceeEEEEeCCCC--cEEEEecCCCeEEEEECCC
Q psy4579 301 GEVNRARYMPQNP--CVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 301 ~~i~~~~~~p~~~--~~lasgs~Dg~i~iwd~~~ 332 (368)
+.|.++.|+|... .+|+.+-.-|.|.|+|++.
T Consensus 1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~ 34 (43)
T PF10313_consen 1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS 34 (43)
T ss_pred CCeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence 4688999998653 5888877789999999984
|
It contains a characteristic DLL sequence motif. |
| >TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL | Back alignment and domain information |
|---|
Probab=94.36 E-value=1.7 Score=39.52 Aligned_cols=59 Identities=12% Similarity=0.099 Sum_probs=39.2
Q ss_pred CeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCC
Q psy4579 142 GYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATP 215 (368)
Q Consensus 142 ~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~ 215 (368)
..+..++.+|.+..+|..+++. ..... ..... .... . ++.++.++.||.+..+|..++.
T Consensus 242 ~~vy~~~~~g~l~a~d~~tG~~-------~W~~~-~~~~~----~p~~--~-~~~vyv~~~~G~l~~~d~~tG~ 300 (377)
T TIGR03300 242 GQVYAVSYQGRVAALDLRSGRV-------LWKRD-ASSYQ----GPAV--D-DNRLYVTDADGVVVALDRRSGS 300 (377)
T ss_pred CEEEEEEcCCEEEEEECCCCcE-------EEeec-cCCcc----CceE--e-CCEEEEECCCCeEEEEECCCCc
Confidence 5677778899999999987742 22221 11111 2222 3 5678888899999999998773
|
Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ. |
| >COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=94.16 E-value=1.3 Score=40.79 Aligned_cols=88 Identities=18% Similarity=0.243 Sum_probs=54.2
Q ss_pred CCCeeeeeccccCCCCceeeEecCCCCCeeEEEe---CC-CcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEe
Q psy4579 115 NEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSAS---DD-HTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWN 190 (368)
Q Consensus 115 ~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~---~d-g~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~ 190 (368)
|.++.....+..-...+..-+|+|++ ..++--+ .. ..+.+++++++... .+..+.++.. .-+|+
T Consensus 179 D~dg~~~~~l~~~~~~~~~p~ws~~~-~~~~y~~f~~~~~~~i~~~~l~~g~~~-----~i~~~~g~~~------~P~fs 246 (425)
T COG0823 179 DYDGYNQQKLTDSGSLILTPAWSPDG-KKLAYVSFELGGCPRIYYLDLNTGKRP-----VILNFNGNNG------APAFS 246 (425)
T ss_pred ccCCcceeEecccCcceeccccCcCC-CceEEEEEecCCCceEEEEeccCCccc-----eeeccCCccC------CccCC
Confidence 33343334444445567778999998 5444332 22 45889999987643 2233445543 67899
Q ss_pred CCCCCeEEEeeCCCcEEEE--ECCCC
Q psy4579 191 PSLNGYLLSASDDHTICLW--DINAT 214 (368)
Q Consensus 191 p~~~~~l~s~s~dg~i~iw--d~~~~ 214 (368)
|++..++++...||...|| |+...
T Consensus 247 pDG~~l~f~~~rdg~~~iy~~dl~~~ 272 (425)
T COG0823 247 PDGSKLAFSSSRDGSPDIYLMDLDGK 272 (425)
T ss_pred CCCCEEEEEECCCCCccEEEEcCCCC
Confidence 9966667777888876655 55554
|
|
| >PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators [] | Back alignment and domain information |
|---|
Probab=93.93 E-value=3.5 Score=34.91 Aligned_cols=119 Identities=17% Similarity=0.253 Sum_probs=64.1
Q ss_pred EEEEecCCCccccccCCcccCCCCcccCCCCCeeeeecc-ccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCC
Q psy4579 86 IASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQFDASN-YDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKE 164 (368)
Q Consensus 86 i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~-~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~ 164 (368)
++.+++.+....+.+.. +..+.|...+.+++.+... ..--+..-.|++..++ .++++--.++.+.++++......
T Consensus 24 ~SGLTy~pd~~tLfaV~---d~~~~i~els~~G~vlr~i~l~g~~D~EgI~y~g~~-~~vl~~Er~~~L~~~~~~~~~~~ 99 (248)
T PF06977_consen 24 LSGLTYNPDTGTLFAVQ---DEPGEIYELSLDGKVLRRIPLDGFGDYEGITYLGNG-RYVLSEERDQRLYIFTIDDDTTS 99 (248)
T ss_dssp EEEEEEETTTTEEEEEE---TTTTEEEEEETT--EEEEEE-SS-SSEEEEEE-STT-EEEEEETTTTEEEEEEE----TT
T ss_pred ccccEEcCCCCeEEEEE---CCCCEEEEEcCCCCEEEEEeCCCCCCceeEEEECCC-EEEEEEcCCCcEEEEEEeccccc
Confidence 77777754444343333 2466777677776655443 1223567788888776 56665556899999998543221
Q ss_pred Ccccccceee-----eccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCC
Q psy4579 165 NRVIDAKTIF-----TGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINA 213 (368)
Q Consensus 165 ~~~~~~~~~~-----~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~ 213 (368)
..... ...+ ..+...+. .++|.|. .+.|+.+-+..-..||.+..
T Consensus 100 ~~~~~-~~~~~l~~~~~~N~G~E---Gla~D~~-~~~L~v~kE~~P~~l~~~~~ 148 (248)
T PF06977_consen 100 LDRAD-VQKISLGFPNKGNKGFE---GLAYDPK-TNRLFVAKERKPKRLYEVNG 148 (248)
T ss_dssp --EEE-EEEEE---S---SS--E---EEEEETT-TTEEEEEEESSSEEEEEEES
T ss_pred cchhh-ceEEecccccCCCcceE---EEEEcCC-CCEEEEEeCCCChhhEEEcc
Confidence 11000 0111 12334466 9999998 66666677777777777654
|
Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A. |
| >PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals | Back alignment and domain information |
|---|
Probab=93.83 E-value=0.28 Score=44.64 Aligned_cols=151 Identities=8% Similarity=0.112 Sum_probs=74.0
Q ss_pred CceeeEecCCcccccCCCCccccccCcceeeeccccCCCCCcEEEEEEecCCCccccccCCcccCCCCcccCCC-----C
Q psy4579 42 PSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPN-----E 116 (368)
Q Consensus 42 ~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~-----~ 116 (368)
.|..+.|.++...|++|...|.|.++.|.....................+.. .....+.+.|-+ +
T Consensus 3 ~v~~vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~----------~~~~~~l~di~~r~~~~~ 72 (395)
T PF08596_consen 3 SVTHVSFAPETLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSL----------NNSPGKLTDISDRAPPSL 72 (395)
T ss_dssp -EEEEEEETTTTEEEEEETTS-EEEEEEEE------------------S--G----------GGSS-SEEE-GGG--TT-
T ss_pred eEEEEEecCCCceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccc----------cCCCcceEEehhhCCccc
Confidence 3567889999999999999999977766443211100111100011001100 000111122211 1
Q ss_pred Ceee-eec-cccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeec------cccceecceeeE
Q psy4579 117 DAQF-DAS-NYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTG------HTAVVEVRYGLS 188 (368)
Q Consensus 117 ~~~~-~~~-~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~------h~~~v~~~~~i~ 188 (368)
...+ ... +....++|++++.|.- .++|.|..+|.+.|.|++...-.- ...+.. ....++ ++.
T Consensus 73 ~~gf~P~~l~~~~~g~vtal~~S~i--GFvaigy~~G~l~viD~RGPavI~-----~~~i~~~~~~~~~~~~vt---~ie 142 (395)
T PF08596_consen 73 KEGFLPLTLLDAKQGPVTALKNSDI--GFVAIGYESGSLVVIDLRGPAVIY-----NENIRESFLSKSSSSYVT---SIE 142 (395)
T ss_dssp SEEEEEEEEE---S-SEEEEEE-BT--SEEEEEETTSEEEEEETTTTEEEE-----EEEGGG--T-SS----EE---EEE
T ss_pred ccccCchhheeccCCcEeEEecCCC--cEEEEEecCCcEEEEECCCCeEEe-----eccccccccccccccCee---EEE
Confidence 1111 111 2234789999999865 499999999999999997642100 001111 122343 666
Q ss_pred EeC----CCC---CeEEEeeCCCcEEEEECC
Q psy4579 189 WNP----SLN---GYLLSASDDHTICLWDIN 212 (368)
Q Consensus 189 ~~p----~~~---~~l~s~s~dg~i~iwd~~ 212 (368)
|.. +++ -.++.|...|.+.+|.+.
T Consensus 143 F~vm~~~~D~ySSi~L~vGTn~G~v~~fkIl 173 (395)
T PF08596_consen 143 FSVMTLGGDGYSSICLLVGTNSGNVLTFKIL 173 (395)
T ss_dssp EEEEE-TTSSSEEEEEEEEETTSEEEEEEEE
T ss_pred EEEEecCCCcccceEEEEEeCCCCEEEEEEe
Confidence 651 212 368889999999999874
|
The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A. |
| >COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=93.66 E-value=1.1 Score=41.18 Aligned_cols=91 Identities=10% Similarity=0.144 Sum_probs=50.2
Q ss_pred cccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEE--eCCCCCCCCcccccceeeeccccceecceee
Q psy4579 110 NVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLW--DINATPKENRVIDAKTIFTGHTAVVEVRYGL 187 (368)
Q Consensus 110 ~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iw--d~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i 187 (368)
.+.+++++...........+.-..-+|+|+|..++++...||...|| |+.+.. ...+..-.+.-+ .=
T Consensus 219 ~i~~~~l~~g~~~~i~~~~g~~~~P~fspDG~~l~f~~~rdg~~~iy~~dl~~~~--------~~~Lt~~~gi~~---~P 287 (425)
T COG0823 219 RIYYLDLNTGKRPVILNFNGNNGAPAFSPDGSKLAFSSSRDGSPDIYLMDLDGKN--------LPRLTNGFGINT---SP 287 (425)
T ss_pred eEEEEeccCCccceeeccCCccCCccCCCCCCEEEEEECCCCCccEEEEcCCCCc--------ceecccCCcccc---Cc
Confidence 35555555432222222344445678999996677777788876555 554432 122222222221 56
Q ss_pred EEeCCCCCeEEEeeCCCcEEEEEC
Q psy4579 188 SWNPSLNGYLLSASDDHTICLWDI 211 (368)
Q Consensus 188 ~~~p~~~~~l~s~s~dg~i~iwd~ 211 (368)
.|+|++..++.+.+..|.-.||-+
T Consensus 288 s~spdG~~ivf~Sdr~G~p~I~~~ 311 (425)
T COG0823 288 SWSPDGSKIVFTSDRGGRPQIYLY 311 (425)
T ss_pred cCCCCCCEEEEEeCCCCCcceEEE
Confidence 789995555556666776555544
|
|
| >PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=93.28 E-value=4.8 Score=36.21 Aligned_cols=152 Identities=14% Similarity=0.123 Sum_probs=67.0
Q ss_pred eeeEecCCcccccCCCCccccccCcceeeeccccCCCCCcEEEEEEecCCCccccccCCcccCCCCcccCCCCCeeee--
Q psy4579 44 LTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQFD-- 121 (368)
Q Consensus 44 ~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~-- 121 (368)
..+-|+||+++||+...|..- +..+.+... ......+..+..+..|..+.... .-.+.++++.+...
T Consensus 104 ~~~~WSpd~~~la~~~~d~~~-v~~~~~~~~--~~~~~~yp~~~~~~YPk~G~~np--------~v~l~v~~~~~~~~~~ 172 (353)
T PF00930_consen 104 SAVWWSPDSKYLAFLRFDERE-VPEYPLPDY--SPPDSQYPEVESIRYPKAGDPNP--------RVSLFVVDLASGKTTE 172 (353)
T ss_dssp BSEEE-TTSSEEEEEEEE-TT-S-EEEEEEE--SSSTESS-EEEEEE--BTTS-----------EEEEEEEESSSTCCCE
T ss_pred cceEECCCCCEEEEEEECCcC-CceEEeecc--CCccccCCcccccccCCCCCcCC--------ceEEEEEECCCCcEEE
Confidence 458899999999875433321 122221110 00111234455555553322110 01123344433211
Q ss_pred -e---ccccCCCCceeeEecCCCCCeeEEE--eCCC---cEEEEeCCCCCCCCcccccceeeeccccceecceeeEEe-C
Q psy4579 122 -A---SNYDTDKGGYGLSWNPSLNGYLLSA--SDDH---TICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWN-P 191 (368)
Q Consensus 122 -~---~~~~h~~~v~~l~~sp~~~~~lasg--~~dg---~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~-p 191 (368)
. ....-...+..+.|.+++ ..|+.. ..+. .+.+.|..++.... +.. .....-+.......|. +
T Consensus 173 ~~~~~~~~~~~~yl~~v~W~~d~-~~l~~~~~nR~q~~~~l~~~d~~tg~~~~-----~~~-e~~~~Wv~~~~~~~~~~~ 245 (353)
T PF00930_consen 173 LDPPNSLNPQDYYLTRVGWSPDG-KRLWVQWLNRDQNRLDLVLCDASTGETRV-----VLE-ETSDGWVDVYDPPHFLGP 245 (353)
T ss_dssp E---HHHHTSSEEEEEEEEEETT-EEEEEEEEETTSTEEEEEEEEECTTTCEE-----EEE-EESSSSSSSSSEEEE-TT
T ss_pred eeeccccCCCccCcccceecCCC-cEEEEEEcccCCCEEEEEEEECCCCceeE-----EEE-ecCCcceeeecccccccC
Confidence 1 112345678899999998 533333 3332 35667776654321 111 1111112111245554 6
Q ss_pred CCCCeEEEeeCCCcEEEEECCC
Q psy4579 192 SLNGYLLSASDDHTICLWDINA 213 (368)
Q Consensus 192 ~~~~~l~s~s~dg~i~iwd~~~ 213 (368)
++..++.....||--+||-+..
T Consensus 246 ~~~~~l~~s~~~G~~hly~~~~ 267 (353)
T PF00930_consen 246 DGNEFLWISERDGYRHLYLYDL 267 (353)
T ss_dssp TSSEEEEEEETTSSEEEEEEET
T ss_pred CCCEEEEEEEcCCCcEEEEEcc
Confidence 6566666667888766665443
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: |
| >KOG2079|consensus | Back alignment and domain information |
|---|
Probab=92.16 E-value=0.4 Score=47.76 Aligned_cols=81 Identities=16% Similarity=0.231 Sum_probs=57.4
Q ss_pred CeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccc
Q psy4579 142 GYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVI 221 (368)
Q Consensus 142 ~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 221 (368)
..++.|+..|.+-..|....-+ +...-..-.++|+ +++|+.+ +..++.|-.+|.|.+||+.+++
T Consensus 100 ~~ivi~Ts~ghvl~~d~~~nL~------~~~~ne~v~~~Vt---svafn~d-g~~l~~G~~~G~V~v~D~~~~k------ 163 (1206)
T KOG2079|consen 100 VPIVIGTSHGHVLLSDMTGNLG------PLHQNERVQGPVT---SVAFNQD-GSLLLAGLGDGHVTVWDMHRAK------ 163 (1206)
T ss_pred eeEEEEcCchhhhhhhhhcccc------hhhcCCccCCcce---eeEecCC-CceeccccCCCcEEEEEccCCc------
Confidence 5788899999999988876411 2122222356786 9999988 9999999999999999998863
Q ss_pred cceeeeecccccEeEEEE
Q psy4579 222 DAKTIFTGHTAVVEDYSI 239 (368)
Q Consensus 222 ~~~~~~~~~~~~v~~v~~ 239 (368)
+.+.+..|..+...+-+
T Consensus 164 -~l~~i~e~~ap~t~vi~ 180 (1206)
T KOG2079|consen 164 -ILKVITEHGAPVTGVIF 180 (1206)
T ss_pred -ceeeeeecCCccceEEE
Confidence 34445445555544444
|
|
| >KOG2444|consensus | Back alignment and domain information |
|---|
Probab=91.75 E-value=0.13 Score=41.83 Aligned_cols=106 Identities=13% Similarity=0.128 Sum_probs=60.7
Q ss_pred cccccCCCCccccccCcceeeeccccCCCCCcEEEEEEecCCCccccccCCcccCCCCcccCCCCCeee-eeccccCC-C
Q psy4579 52 VTSVQLPNEDAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQF-DASNYDTD-K 129 (368)
Q Consensus 52 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~-~~~~~~h~-~ 129 (368)
+..|++|..+|.+.+++|.........-..... ...+.+|.... ...+|....+|.|+.|+..... +.....|+ .
T Consensus 70 ~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~e-~i~~~Ip~~~~--~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~~ 146 (238)
T KOG2444|consen 70 SAKLMVGTSDGAVYVFNWNLEGAHSDRVCSGEE-SIDLGIPNGRD--SSLGCVGAQDGRIRACNIKPNKVLGYVGQHNFE 146 (238)
T ss_pred CceEEeecccceEEEecCCccchHHHhhhcccc-cceeccccccc--cceeEEeccCCceeeeccccCceeeeeccccCC
Confidence 566888999999988888743211111111111 22333444322 1123444568999999987643 44444566 4
Q ss_pred CceeeEecCCCCCeeEEE--eCCCcEEEEeCCCC
Q psy4579 130 GGYGLSWNPSLNGYLLSA--SDDHTICLWDINAT 161 (368)
Q Consensus 130 ~v~~l~~sp~~~~~lasg--~~dg~v~iwd~~~~ 161 (368)
++..+..+..+ ..++.+ |.|..++.|++..-
T Consensus 147 ~~e~~ivv~sd-~~i~~a~~S~d~~~k~W~ve~~ 179 (238)
T KOG2444|consen 147 SGEELIVVGSD-EFLKIADTSHDRVLKKWNVEKI 179 (238)
T ss_pred CcceeEEecCC-ceEEeeccccchhhhhcchhhh
Confidence 55555555555 666666 67777777777643
|
|
| >PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment | Back alignment and domain information |
|---|
Probab=91.52 E-value=4.7 Score=37.43 Aligned_cols=143 Identities=15% Similarity=0.139 Sum_probs=66.9
Q ss_pred CCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcE
Q psy4579 127 TDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTI 206 (368)
Q Consensus 127 h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i 206 (368)
..-....+.++|+| +.++. +.||.-.|+..... +. +. .+.. ..+.|.+ .+.+|+-...++|
T Consensus 31 ~~~~p~~ls~npng-r~v~V-~g~geY~iyt~~~~----------r~-k~-~G~g---~~~vw~~--~n~yAv~~~~~~I 91 (443)
T PF04053_consen 31 CEIYPQSLSHNPNG-RFVLV-CGDGEYEIYTALAW----------RN-KA-FGSG---LSFVWSS--RNRYAVLESSSTI 91 (443)
T ss_dssp -SS--SEEEE-TTS-SEEEE-EETTEEEEEETTTT----------EE-EE-EEE----SEEEE-T--SSEEEEE-TTS-E
T ss_pred CCcCCeeEEECCCC-CEEEE-EcCCEEEEEEccCC----------cc-cc-cCce---eEEEEec--CccEEEEECCCeE
Confidence 33457889999998 77777 55788888873322 11 11 2222 2888988 4557777778999
Q ss_pred EEEE-CCCCCCCCccccceeeeecccccEeEEEEeeecccccCCCCccceEEEEeecCCcccccccccccCCCCCccccc
Q psy4579 207 CLWD-INATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFG 285 (368)
Q Consensus 207 ~iwd-~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 285 (368)
+|+. +.... ...+.. ...+..+-. ..+++..+ .+.+.++|
T Consensus 92 ~I~kn~~~~~--------~k~i~~-~~~~~~If~-G~LL~~~~-----------------------------~~~i~~yD 132 (443)
T PF04053_consen 92 KIYKNFKNEV--------VKSIKL-PFSVEKIFG-GNLLGVKS-----------------------------SDFICFYD 132 (443)
T ss_dssp EEEETTEE-T--------T------SS-EEEEE--SSSEEEEE-----------------------------TTEEEEE-
T ss_pred EEEEcCcccc--------ceEEcC-CcccceEEc-CcEEEEEC-----------------------------CCCEEEEE
Confidence 9963 32211 011111 011211111 11111110 11244455
Q ss_pred CCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCC
Q psy4579 286 SVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 286 ~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
..+++.+..+. . .+|..+.|++++ .++|-.+ +.++.|.+...
T Consensus 133 w~~~~~i~~i~--v-~~vk~V~Ws~~g-~~val~t-~~~i~il~~~~ 174 (443)
T PF04053_consen 133 WETGKLIRRID--V-SAVKYVIWSDDG-ELVALVT-KDSIYILKYNL 174 (443)
T ss_dssp TTT--EEEEES--S--E-EEEEE-TTS-SEEEEE--S-SEEEEEE-H
T ss_pred hhHcceeeEEe--c-CCCcEEEEECCC-CEEEEEe-CCeEEEEEecc
Confidence 55666666654 2 248999999999 5666655 45788887754
|
This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B. |
| >PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region | Back alignment and domain information |
|---|
Probab=91.22 E-value=4.3 Score=29.31 Aligned_cols=84 Identities=10% Similarity=0.020 Sum_probs=54.7
Q ss_pred CCCcccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceeccee
Q psy4579 107 KGGNVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYG 186 (368)
Q Consensus 107 ~~g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 186 (368)
.|..|++|+.+. +.....-.+.|.+|.-... ..++-+..+|+|-+|+-... ....+....++ +
T Consensus 23 ~D~~IRvf~~~e--~~~Ei~e~~~v~~L~~~~~--~~F~Y~l~NGTVGvY~~~~R---------lWRiKSK~~~~----~ 85 (111)
T PF14783_consen 23 DDFEIRVFKGDE--IVAEITETDKVTSLCSLGG--GRFAYALANGTVGVYDRSQR---------LWRIKSKNQVT----S 85 (111)
T ss_pred CCcEEEEEeCCc--EEEEEecccceEEEEEcCC--CEEEEEecCCEEEEEeCcce---------eeeeccCCCeE----E
Confidence 588899988763 2333345577888877765 57999999999999986442 23334333344 5
Q ss_pred eEEeCC---CCCeEEEeeCCCcEE
Q psy4579 187 LSWNPS---LNGYLLSASDDHTIC 207 (368)
Q Consensus 187 i~~~p~---~~~~l~s~s~dg~i~ 207 (368)
+.+..- +..-|++|=.+|.|-
T Consensus 86 ~~~~D~~gdG~~eLI~GwsnGkve 109 (111)
T PF14783_consen 86 MAFYDINGDGVPELIVGWSNGKVE 109 (111)
T ss_pred EEEEcCCCCCceEEEEEecCCeEE
Confidence 555432 223688888888763
|
|
| >KOG2444|consensus | Back alignment and domain information |
|---|
Probab=90.92 E-value=0.48 Score=38.69 Aligned_cols=96 Identities=17% Similarity=0.084 Sum_probs=51.7
Q ss_pred CCCCcccCCCCC--eeeeeccccCCCCceeeEec-CCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccc-cce
Q psy4579 106 DKGGNVQLPNED--AQFDASNYDTDKGGYGLSWN-PSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHT-AVV 181 (368)
Q Consensus 106 ~~~g~i~i~~~~--~~~~~~~~~h~~~v~~l~~s-p~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~-~~v 181 (368)
..+|.|.+|+.+ +........-...|-+.--+ .++ .+..+++.||.||.|++.-.+. ......|+ .+.
T Consensus 77 ~~dg~v~~~n~n~~g~~~d~~~s~~e~i~~~Ip~~~~~-~~~c~~~~dg~ir~~n~~p~k~-------~g~~g~h~~~~~ 148 (238)
T KOG2444|consen 77 TSDGAVYVFNWNLEGAHSDRVCSGEESIDLGIPNGRDS-SLGCVGAQDGRIRACNIKPNKV-------LGYVGQHNFESG 148 (238)
T ss_pred cccceEEEecCCccchHHHhhhcccccceecccccccc-ceeEEeccCCceeeeccccCce-------eeeeccccCCCc
Confidence 358888887665 22222222222333332222 222 5888999999999999876542 23334444 333
Q ss_pred ecceeeEEeCCCCCeEEEe--eCCCcEEEEECCC
Q psy4579 182 EVRYGLSWNPSLNGYLLSA--SDDHTICLWDINA 213 (368)
Q Consensus 182 ~~~~~i~~~p~~~~~l~s~--s~dg~i~iwd~~~ 213 (368)
. .+..+.. +.+++++ |.|..++.|++..
T Consensus 149 e---~~ivv~s-d~~i~~a~~S~d~~~k~W~ve~ 178 (238)
T KOG2444|consen 149 E---ELIVVGS-DEFLKIADTSHDRVLKKWNVEK 178 (238)
T ss_pred c---eeEEecC-CceEEeeccccchhhhhcchhh
Confidence 2 2222222 4555555 6666777776654
|
|
| >KOG2395|consensus | Back alignment and domain information |
|---|
Probab=90.74 E-value=4.2 Score=37.74 Aligned_cols=116 Identities=17% Similarity=0.229 Sum_probs=67.2
Q ss_pred CCceeeEecCCCC------CeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecce-eeEEeCCCCCeEEEee
Q psy4579 129 KGGYGLSWNPSLN------GYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRY-GLSWNPSLNGYLLSAS 201 (368)
Q Consensus 129 ~~v~~l~~sp~~~------~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~-~i~~~p~~~~~l~s~s 201 (368)
+.|+-+.+.|+.. ..-+.|-.|..|.-||.+-.... .+....+|.-....-+ |++- +.+.++|.||
T Consensus 376 ~di~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~-----kl~~~q~kqy~~k~nFsc~aT--T~sG~IvvgS 448 (644)
T KOG2395|consen 376 DDINMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKN-----KLAVVQSKQYSTKNNFSCFAT--TESGYIVVGS 448 (644)
T ss_pred CCcceeeccCCcchhcccccccEEeecCCceEEecccccCcc-----eeeeeeccccccccccceeee--cCCceEEEee
Confidence 3377777877641 12345667888999998854321 1222333321110001 3332 3378999999
Q ss_pred CCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEe---eecccccCCCCccceEEEEeec
Q psy4579 202 DDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIH---RLILGTHTSDEQNHLLIASVQL 262 (368)
Q Consensus 202 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~---~~~~~~~~~d~~~~~~~~~~~~ 262 (368)
.+|.|++||- .+. .....+.+...+|..|... ..+++++. .++.+....+
T Consensus 449 ~~GdIRLYdr-i~~------~AKTAlPgLG~~I~hVdvtadGKwil~Tc~----tyLlLi~t~~ 501 (644)
T KOG2395|consen 449 LKGDIRLYDR-IGR------RAKTALPGLGDAIKHVDVTADGKWILATCK----TYLLLIDTLI 501 (644)
T ss_pred cCCcEEeehh-hhh------hhhhcccccCCceeeEEeeccCcEEEEecc----cEEEEEEEec
Confidence 9999999996 332 2234566777778777664 35666655 4555555433
|
|
| >PRK02888 nitrous-oxide reductase; Validated | Back alignment and domain information |
|---|
Probab=90.35 E-value=7.5 Score=37.36 Aligned_cols=30 Identities=13% Similarity=0.225 Sum_probs=23.4
Q ss_pred eeeEEeCCCCCeEEEeeCCCcEEEEECCCC
Q psy4579 185 YGLSWNPSLNGYLLSASDDHTICLWDINAT 214 (368)
Q Consensus 185 ~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~ 214 (368)
..+.++|++..+++++..+.+|.|.|+.+.
T Consensus 324 HGV~vSPDGkylyVanklS~tVSVIDv~k~ 353 (635)
T PRK02888 324 HGVNTSPDGKYFIANGKLSPTVTVIDVRKL 353 (635)
T ss_pred cceEECCCCCEEEEeCCCCCcEEEEEChhh
Confidence 489999994444556667999999999775
|
|
| >PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs | Back alignment and domain information |
|---|
Probab=90.20 E-value=21 Score=35.49 Aligned_cols=36 Identities=22% Similarity=0.399 Sum_probs=29.1
Q ss_pred CCCCceeeEecCCC--CCeeEEEeCCCcEEEEeCCCCC
Q psy4579 127 TDKGGYGLSWNPSL--NGYLLSASDDHTICLWDINATP 162 (368)
Q Consensus 127 h~~~v~~l~~sp~~--~~~lasg~~dg~v~iwd~~~~~ 162 (368)
+...|..+.|+|.+ +..|+.=..|+++|+||+....
T Consensus 145 ~~~~i~qv~WhP~s~~~~~l~vLtsdn~lR~y~~~~~~ 182 (717)
T PF10168_consen 145 SSLEIKQVRWHPWSESDSHLVVLTSDNTLRLYDISDPQ 182 (717)
T ss_pred CCceEEEEEEcCCCCCCCeEEEEecCCEEEEEecCCCC
Confidence 45678899999974 3678888899999999997543
|
It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells []. |
| >PRK11138 outer membrane biogenesis protein BamB; Provisional | Back alignment and domain information |
|---|
Probab=89.88 E-value=15 Score=33.58 Aligned_cols=66 Identities=9% Similarity=0.060 Sum_probs=36.3
Q ss_pred CeeEEEeCCCcEEEEeCCCCCCCCcccccceeeec--ccc--ceecceeeEEeC--CCCCeEEEeeCCCcEEEEECCCCC
Q psy4579 142 GYLLSASDDHTICLWDINATPKENRVIDAKTIFTG--HTA--VVEVRYGLSWNP--SLNGYLLSASDDHTICLWDINATP 215 (368)
Q Consensus 142 ~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~--h~~--~v~~~~~i~~~p--~~~~~l~s~s~dg~i~iwd~~~~~ 215 (368)
..++.++.+|.+...|..+++.. ..... ..+ .+.....+.-+| . +..++.++.+|.+..+|+.++.
T Consensus 206 ~~v~~~~~~g~v~a~d~~~G~~~-------W~~~~~~~~~~~~~~~~~~~~~sP~v~-~~~vy~~~~~g~l~ald~~tG~ 277 (394)
T PRK11138 206 GGAIVGGDNGRVSAVLMEQGQLI-------WQQRISQPTGATEIDRLVDVDTTPVVV-GGVVYALAYNGNLVALDLRSGQ 277 (394)
T ss_pred CEEEEEcCCCEEEEEEccCChhh-------heeccccCCCccchhcccccCCCcEEE-CCEEEEEEcCCeEEEEECCCCC
Confidence 35666778899998898877531 11110 000 000000111111 2 4567777889999999998873
|
|
| >PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=88.87 E-value=4.3 Score=36.55 Aligned_cols=100 Identities=16% Similarity=0.286 Sum_probs=50.7
Q ss_pred CcccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccc-cceeeeccc-----cc-e
Q psy4579 109 GNVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVID-AKTIFTGHT-----AV-V 181 (368)
Q Consensus 109 g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~-~~~~~~~h~-----~~-v 181 (368)
+.+.+++++.+....+......+....|||+| +.+|-.. ++.|.+++..++....-+.. ....+.|-. .+ .
T Consensus 23 ~~y~i~d~~~~~~~~l~~~~~~~~~~~~sP~g-~~~~~v~-~~nly~~~~~~~~~~~lT~dg~~~i~nG~~dwvyeEEv~ 100 (353)
T PF00930_consen 23 GDYYIYDIETGEITPLTPPPPKLQDAKWSPDG-KYIAFVR-DNNLYLRDLATGQETQLTTDGEPGIYNGVPDWVYEEEVF 100 (353)
T ss_dssp EEEEEEETTTTEEEESS-EETTBSEEEE-SSS-TEEEEEE-TTEEEEESSTTSEEEESES--TTTEEESB--HHHHHHTS
T ss_pred eeEEEEecCCCceEECcCCccccccceeecCC-CeeEEEe-cCceEEEECCCCCeEEeccccceeEEcCccceecccccc
Confidence 34555565554444444346788899999998 7777665 68899998766521100000 000111110 11 1
Q ss_pred ecceeeEEeCCCCCeEEEee-CCCcEEEEEC
Q psy4579 182 EVRYGLSWNPSLNGYLLSAS-DDHTICLWDI 211 (368)
Q Consensus 182 ~~~~~i~~~p~~~~~l~s~s-~dg~i~iwd~ 211 (368)
..-.++-|||+ +.+||..- .+..|+.+.+
T Consensus 101 ~~~~~~~WSpd-~~~la~~~~d~~~v~~~~~ 130 (353)
T PF00930_consen 101 DRRSAVWWSPD-SKYLAFLRFDEREVPEYPL 130 (353)
T ss_dssp SSSBSEEE-TT-SSEEEEEEEE-TTS-EEEE
T ss_pred ccccceEECCC-CCEEEEEEECCcCCceEEe
Confidence 00138899999 77776664 4445554443
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: |
| >PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase | Back alignment and domain information |
|---|
Probab=88.65 E-value=15 Score=31.56 Aligned_cols=145 Identities=12% Similarity=0.050 Sum_probs=73.3
Q ss_pred CcccccCCCCccccccCcceeeeccccCCCCCcEEEEEEecCCCccccccCCcccCCCCcccCCCCCeeeeec-------
Q psy4579 51 DVTSVQLPNEDAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQFDAS------- 123 (368)
Q Consensus 51 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~------- 123 (368)
.++.|++|.++| + +.++...............|..+..-+.-..+.... ||.+.+++++.-....
T Consensus 6 ~~~~L~vGt~~G-l--~~~~~~~~~~~~~i~~~~~I~ql~vl~~~~~llvLs-----d~~l~~~~L~~l~~~~~~~~~~~ 77 (275)
T PF00780_consen 6 WGDRLLVGTEDG-L--YVYDLSDPSKPTRILKLSSITQLSVLPELNLLLVLS-----DGQLYVYDLDSLEPVSTSAPLAF 77 (275)
T ss_pred CCCEEEEEECCC-E--EEEEecCCccceeEeecceEEEEEEecccCEEEEEc-----CCccEEEEchhhccccccccccc
Confidence 477788888888 4 444441111111111222366666543333333332 5788887765311111
Q ss_pred --------cccCCCCceeeE--ecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCC
Q psy4579 124 --------NYDTDKGGYGLS--WNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSL 193 (368)
Q Consensus 124 --------~~~h~~~v~~l~--~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~ 193 (368)
.....+.+...+ -.+.+ ...+.......|.+|.......... ...+.+.-.. .+ .+++|.
T Consensus 78 ~~~~~~~~~~~~~~~v~~f~~~~~~~~-~~~L~va~kk~i~i~~~~~~~~~f~--~~~ke~~lp~-~~---~~i~~~--- 147 (275)
T PF00780_consen 78 PKSRSLPTKLPETKGVSFFAVNGGHEG-SRRLCVAVKKKILIYEWNDPRNSFS--KLLKEISLPD-PP---SSIAFL--- 147 (275)
T ss_pred cccccccccccccCCeeEEeecccccc-ceEEEEEECCEEEEEEEECCccccc--ceeEEEEcCC-Cc---EEEEEe---
Confidence 222334455444 12333 3444445556999988876422110 1234444333 33 389998
Q ss_pred CCeEEEeeCCCcEEEEECCCC
Q psy4579 194 NGYLLSASDDHTICLWDINAT 214 (368)
Q Consensus 194 ~~~l~s~s~dg~i~iwd~~~~ 214 (368)
++.++.|..+ ...+.|+.++
T Consensus 148 ~~~i~v~~~~-~f~~idl~~~ 167 (275)
T PF00780_consen 148 GNKICVGTSK-GFYLIDLNTG 167 (275)
T ss_pred CCEEEEEeCC-ceEEEecCCC
Confidence 4456666544 4778898865
|
These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity |
| >PF15390 DUF4613: Domain of unknown function (DUF4613) | Back alignment and domain information |
|---|
Probab=88.49 E-value=12 Score=35.47 Aligned_cols=31 Identities=23% Similarity=0.562 Sum_probs=22.2
Q ss_pred CCceeeEecCCC----CCeeEEEeCCCcEEEEeCCC
Q psy4579 129 KGGYGLSWNPSL----NGYLLSASDDHTICLWDINA 160 (368)
Q Consensus 129 ~~v~~l~~sp~~----~~~lasg~~dg~v~iwd~~~ 160 (368)
..|..+.|.|-+ |.+|| .-..+.|.+|.+.-
T Consensus 57 EhV~GlsW~P~~~~~~paLLA-VQHkkhVtVWqL~~ 91 (671)
T PF15390_consen 57 EHVHGLSWAPPCTADTPALLA-VQHKKHVTVWQLCP 91 (671)
T ss_pred ceeeeeeecCcccCCCCceEE-EeccceEEEEEecc
Confidence 458889999853 33454 45578899999874
|
|
| >PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins | Back alignment and domain information |
|---|
Probab=88.12 E-value=1.9 Score=42.66 Aligned_cols=72 Identities=18% Similarity=0.220 Sum_probs=52.3
Q ss_pred CCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcE
Q psy4579 127 TDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTI 206 (368)
Q Consensus 127 h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i 206 (368)
.+...+|++-+.+| +||.|+.+|.||+||-- +.. ....+.+-..+|. +|+.+.+ |.+++..+ +..+
T Consensus 576 ~~~~Fs~~aTt~~G--~iavgs~~G~IRLyd~~-g~~------AKT~lp~lG~pI~---~iDvt~D-GkwilaTc-~tyL 641 (794)
T PF08553_consen 576 SKNNFSCFATTEDG--YIAVGSNKGDIRLYDRL-GKR------AKTALPGLGDPII---GIDVTAD-GKWILATC-KTYL 641 (794)
T ss_pred cCCCceEEEecCCc--eEEEEeCCCcEEeeccc-chh------hhhcCCCCCCCee---EEEecCC-CcEEEEee-cceE
Confidence 45567788777765 89999999999999943 221 3355667778886 9999998 77765543 5667
Q ss_pred EEEECC
Q psy4579 207 CLWDIN 212 (368)
Q Consensus 207 ~iwd~~ 212 (368)
.|++..
T Consensus 642 lLi~t~ 647 (794)
T PF08553_consen 642 LLIDTL 647 (794)
T ss_pred EEEEEe
Confidence 777753
|
Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ]. |
| >KOG4649|consensus | Back alignment and domain information |
|---|
Probab=87.85 E-value=16 Score=30.94 Aligned_cols=18 Identities=11% Similarity=0.104 Sum_probs=14.7
Q ss_pred cEEEEecCCCeEEEEECCC
Q psy4579 314 CVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 314 ~~lasgs~Dg~i~iwd~~~ 332 (368)
.+| .|+.|..++-||+..
T Consensus 335 rl~-igcRDdYv~cldl~~ 352 (354)
T KOG4649|consen 335 RLL-IGCRDDYVRCLDLDT 352 (354)
T ss_pred EEE-EEEccCeEEEEeccc
Confidence 455 788999999999863
|
|
| >PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin | Back alignment and domain information |
|---|
Probab=87.25 E-value=3.1 Score=34.49 Aligned_cols=70 Identities=9% Similarity=0.178 Sum_probs=41.3
Q ss_pred CCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeee-------ccccceecceeeEEeCCCCCeEEEeeCCCcEEEEE
Q psy4579 138 PSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFT-------GHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWD 210 (368)
Q Consensus 138 p~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~-------~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd 210 (368)
..+ .+|++-..+|.+++||+.+.+...+.......+. .....|. .+..+.+ |.-+++-+ +|....||
T Consensus 20 ~~~-~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~---~~~lt~~-G~PiV~ls-ng~~y~y~ 93 (219)
T PF07569_consen 20 CNG-SYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNIT---SCSLTSN-GVPIVTLS-NGDSYSYS 93 (219)
T ss_pred eCC-CEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEE---EEEEcCC-CCEEEEEe-CCCEEEec
Confidence 445 7899999999999999998754222110111111 2334443 6666655 55555544 57778887
Q ss_pred CCC
Q psy4579 211 INA 213 (368)
Q Consensus 211 ~~~ 213 (368)
..-
T Consensus 94 ~~L 96 (219)
T PF07569_consen 94 PDL 96 (219)
T ss_pred ccc
Confidence 543
|
These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus |
| >PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit | Back alignment and domain information |
|---|
Probab=86.97 E-value=21 Score=31.53 Aligned_cols=142 Identities=14% Similarity=0.243 Sum_probs=70.2
Q ss_pred CcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecc
Q psy4579 151 HTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGH 230 (368)
Q Consensus 151 g~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 230 (368)
|.|.++++.........++.+... ...++|. +++-.. +. |+.+. .+.|.+|++..... +.....+. .
T Consensus 62 Gri~v~~i~~~~~~~~~l~~i~~~-~~~g~V~---ai~~~~--~~-lv~~~-g~~l~v~~l~~~~~----l~~~~~~~-~ 128 (321)
T PF03178_consen 62 GRILVFEISESPENNFKLKLIHST-EVKGPVT---AICSFN--GR-LVVAV-GNKLYVYDLDNSKT----LLKKAFYD-S 128 (321)
T ss_dssp EEEEEEEECSS-----EEEEEEEE-EESS-EE---EEEEET--TE-EEEEE-TTEEEEEEEETTSS----EEEEEEE--B
T ss_pred cEEEEEEEEcccccceEEEEEEEE-eecCcce---EhhhhC--CE-EEEee-cCEEEEEEccCccc----chhhheec-c
Confidence 889999998741111111122222 2356664 666552 34 44433 58899999987641 11122222 2
Q ss_pred cccEeEEEEeeecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeC
Q psy4579 231 TAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMP 310 (368)
Q Consensus 231 ~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p 310 (368)
...+.++......+..++......++ .|+.. ..++...-+......++++.|-+
T Consensus 129 ~~~i~sl~~~~~~I~vgD~~~sv~~~----------------~~~~~----------~~~l~~va~d~~~~~v~~~~~l~ 182 (321)
T PF03178_consen 129 PFYITSLSVFKNYILVGDAMKSVSLL----------------RYDEE----------NNKLILVARDYQPRWVTAAEFLV 182 (321)
T ss_dssp SSSEEEEEEETTEEEEEESSSSEEEE----------------EEETT----------TE-EEEEEEESS-BEEEEEEEE-
T ss_pred eEEEEEEeccccEEEEEEcccCEEEE----------------EEEcc----------CCEEEEEEecCCCccEEEEEEec
Confidence 23555665544333333222222222 12111 11122222223456789999997
Q ss_pred CCCcEEEEecCCCeEEEEECCC
Q psy4579 311 QNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 311 ~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
+++ .++.+..+|.+.++....
T Consensus 183 d~~-~~i~~D~~gnl~~l~~~~ 203 (321)
T PF03178_consen 183 DED-TIIVGDKDGNLFVLRYNP 203 (321)
T ss_dssp SSS-EEEEEETTSEEEEEEE-S
T ss_pred CCc-EEEEEcCCCeEEEEEECC
Confidence 774 666889999999999864
|
CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A .... |
| >PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=85.82 E-value=23 Score=30.89 Aligned_cols=154 Identities=16% Similarity=0.199 Sum_probs=83.7
Q ss_pred ceeeEecCCCCCeeEEEeCCCc-EEEEeCCCCCCCCcc-cccceeeeccccceecceeeEEeCCCCCeEEEe-----eCC
Q psy4579 131 GYGLSWNPSLNGYLLSASDDHT-ICLWDINATPKENRV-IDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSA-----SDD 203 (368)
Q Consensus 131 v~~l~~sp~~~~~lasg~~dg~-v~iwd~~~~~~~~~~-~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~-----s~d 203 (368)
...++.+|..+..++.+-.-|+ ..+||..++...... ...-+-|.|| -.|+++ +.+|++. +..
T Consensus 7 gH~~a~~p~~~~avafaRRPG~~~~v~D~~~g~~~~~~~a~~gRHFyGH---------g~fs~d-G~~LytTEnd~~~g~ 76 (305)
T PF07433_consen 7 GHGVAAHPTRPEAVAFARRPGTFALVFDCRTGQLLQRLWAPPGRHFYGH---------GVFSPD-GRLLYTTENDYETGR 76 (305)
T ss_pred ccceeeCCCCCeEEEEEeCCCcEEEEEEcCCCceeeEEcCCCCCEEecC---------EEEcCC-CCEEEEeccccCCCc
Confidence 4457788866577777777665 567888877532110 0112334444 478998 8888875 346
Q ss_pred CcEEEEECCCCCCCCccccceeeeecccccEeEEEEeeecccccCCCCccceEEEEeecCCc----ccccccccccCCCC
Q psy4579 204 HTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNE----DAQFDASNYDTDKG 279 (368)
Q Consensus 204 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~----~~~~~~~~~d~~~~ 279 (368)
|.|-|||....- ..+..+..|.-.-..+.+.+ ....+.++...+... ..++. .|.-..
T Consensus 77 G~IgVyd~~~~~------~ri~E~~s~GIGPHel~l~p---------DG~tLvVANGGI~Thpd~GR~kLN---l~tM~p 138 (305)
T PF07433_consen 77 GVIGVYDAARGY------RRIGEFPSHGIGPHELLLMP---------DGETLVVANGGIETHPDSGRAKLN---LDTMQP 138 (305)
T ss_pred EEEEEEECcCCc------EEEeEecCCCcChhhEEEcC---------CCCEEEEEcCCCccCcccCceecC---hhhcCC
Confidence 789999998431 22334443332222333332 012333333322211 11121 222223
Q ss_pred CcccccCCCCceeeeeec---CcccceeEEEEeCCC
Q psy4579 280 DFGGFGSVSGKIEIEIKI---NHEGEVNRARYMPQN 312 (368)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~---~h~~~i~~~~~~p~~ 312 (368)
.+...|..+|+++-+... -|.-.|.-+++.++|
T Consensus 139 sL~~ld~~sG~ll~q~~Lp~~~~~lSiRHLa~~~~G 174 (305)
T PF07433_consen 139 SLVYLDARSGALLEQVELPPDLHQLSIRHLAVDGDG 174 (305)
T ss_pred ceEEEecCCCceeeeeecCccccccceeeEEecCCC
Confidence 355566777877665432 366789999999988
|
|
| >PRK13616 lipoprotein LpqB; Provisional | Back alignment and domain information |
|---|
Probab=85.29 E-value=3.4 Score=39.93 Aligned_cols=79 Identities=11% Similarity=0.123 Sum_probs=42.2
Q ss_pred cCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCC-CCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCC
Q psy4579 126 DTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINAT-PKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDH 204 (368)
Q Consensus 126 ~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~-~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg 204 (368)
...+.|..++|||+| ..+|-.. +|.|.+=-+... ........+.....+-...+. ++.|.++ +. |+.+..++
T Consensus 445 ~~~g~Issl~wSpDG-~RiA~i~-~g~v~Va~Vvr~~~G~~~l~~~~~l~~~l~~~~~---~l~W~~~-~~-L~V~~~~~ 517 (591)
T PRK13616 445 RVPGPISELQLSRDG-VRAAMII-GGKVYLAVVEQTEDGQYALTNPREVGPGLGDTAV---SLDWRTG-DS-LVVGRSDP 517 (591)
T ss_pred ccCCCcCeEEECCCC-CEEEEEE-CCEEEEEEEEeCCCCceeecccEEeecccCCccc---cceEecC-CE-EEEEecCC
Confidence 346689999999999 6665544 577766333221 111111112112222333333 8999987 55 44555555
Q ss_pred cEEEEEC
Q psy4579 205 TICLWDI 211 (368)
Q Consensus 205 ~i~iwd~ 211 (368)
...+|-+
T Consensus 518 ~~~v~~v 524 (591)
T PRK13616 518 EHPVWYV 524 (591)
T ss_pred CCceEEE
Confidence 4445543
|
|
| >KOG4499|consensus | Back alignment and domain information |
|---|
Probab=85.09 E-value=14 Score=30.63 Aligned_cols=97 Identities=11% Similarity=0.125 Sum_probs=60.4
Q ss_pred eeeEecCCCCCeeEEEeCCCcEEEEeC--CCCCCCCcccccceeeec---cccceecceeeEEeCCCCCeEEEeeCCCcE
Q psy4579 132 YGLSWNPSLNGYLLSASDDHTICLWDI--NATPKENRVIDAKTIFTG---HTAVVEVRYGLSWNPSLNGYLLSASDDHTI 206 (368)
Q Consensus 132 ~~l~~sp~~~~~lasg~~dg~v~iwd~--~~~~~~~~~~~~~~~~~~---h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i 206 (368)
+.|+|+.+...+..+-+.+-+|.-||. .++....+ +.+..++. ....... .++..-+ +++.++.-.-++|
T Consensus 161 Ngl~Wd~d~K~fY~iDsln~~V~a~dyd~~tG~~snr--~~i~dlrk~~~~e~~~PD--Gm~ID~e-G~L~Va~~ng~~V 235 (310)
T KOG4499|consen 161 NGLAWDSDAKKFYYIDSLNYEVDAYDYDCPTGDLSNR--KVIFDLRKSQPFESLEPD--GMTIDTE-GNLYVATFNGGTV 235 (310)
T ss_pred ccccccccCcEEEEEccCceEEeeeecCCCcccccCc--ceeEEeccCCCcCCCCCC--cceEccC-CcEEEEEecCcEE
Confidence 568898776456777888899988884 44432211 11111211 1111111 3344444 7888888888999
Q ss_pred EEEECCCCCCCCccccceeeeecccccEeEEEEe
Q psy4579 207 CLWDINATPKENRVIDAKTIFTGHTAVVEDYSIH 240 (368)
Q Consensus 207 ~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~ 240 (368)
.-.|+.+++ .+..+.-.+..|++++|-
T Consensus 236 ~~~dp~tGK-------~L~eiklPt~qitsccFg 262 (310)
T KOG4499|consen 236 QKVDPTTGK-------ILLEIKLPTPQITSCCFG 262 (310)
T ss_pred EEECCCCCc-------EEEEEEcCCCceEEEEec
Confidence 999999984 345555567788999885
|
|
| >COG3386 Gluconolactonase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=84.91 E-value=11 Score=33.17 Aligned_cols=116 Identities=10% Similarity=0.095 Sum_probs=59.6
Q ss_pred ccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCC--CCCCCcccccceeeeccccceecceeeE
Q psy4579 111 VQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINA--TPKENRVIDAKTIFTGHTAVVEVRYGLS 188 (368)
Q Consensus 111 i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~--~~~~~~~~~~~~~~~~h~~~v~~~~~i~ 188 (368)
+.-.+..+..+....++-..-+.|+|||++..++++=+..+.|..|++.. +....+ .....+....+..- .++
T Consensus 145 lyr~~p~g~~~~l~~~~~~~~NGla~SpDg~tly~aDT~~~~i~r~~~d~~~g~~~~~--~~~~~~~~~~G~PD---G~~ 219 (307)
T COG3386 145 LYRVDPDGGVVRLLDDDLTIPNGLAFSPDGKTLYVADTPANRIHRYDLDPATGPIGGR--RGFVDFDEEPGLPD---GMA 219 (307)
T ss_pred EEEEcCCCCEEEeecCcEEecCceEECCCCCEEEEEeCCCCeEEEEecCcccCccCCc--ceEEEccCCCCCCC---ceE
Confidence 33333333334444444445578999999944555555568888887763 111110 01111212222222 555
Q ss_pred EeCCCCCeEEEeeCCC-cEEEEECCCCCCCCccccceeeeecccccEeEEEEe
Q psy4579 189 WNPSLNGYLLSASDDH-TICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIH 240 (368)
Q Consensus 189 ~~p~~~~~l~s~s~dg-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~ 240 (368)
.-.+ +++-+++-.+| .|..|+.. + +.+..+.-....+.+++|-
T Consensus 220 vDad-G~lw~~a~~~g~~v~~~~pd-G-------~l~~~i~lP~~~~t~~~Fg 263 (307)
T COG3386 220 VDAD-GNLWVAAVWGGGRVVRFNPD-G-------KLLGEIKLPVKRPTNPAFG 263 (307)
T ss_pred EeCC-CCEEEecccCCceEEEECCC-C-------cEEEEEECCCCCCccceEe
Confidence 5555 66655555554 89999887 4 2234444333455666663
|
|
| >COG3391 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=84.76 E-value=31 Score=31.44 Aligned_cols=95 Identities=15% Similarity=0.243 Sum_probs=59.1
Q ss_pred CCcccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEe--CCCcEEEEeCCCCCCCCcccccceeeeccccceecce
Q psy4579 108 GGNVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSAS--DDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRY 185 (368)
Q Consensus 108 ~g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~--~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 185 (368)
+..|.+.+...........-...-..++++|++....++-. .++++.+.|..+... ......-..+.
T Consensus 95 ~~~v~vid~~~~~~~~~~~vG~~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~-------~~~~~vG~~P~---- 163 (381)
T COG3391 95 SNTVSVIDTATNTVLGSIPVGLGPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKV-------TATIPVGNTPT---- 163 (381)
T ss_pred CCeEEEEcCcccceeeEeeeccCCceEEECCCCCEEEEEecccCCceEEEEeCCCCeE-------EEEEecCCCcc----
Confidence 45666666554443333333336678999999844444444 368888888776642 22222222333
Q ss_pred eeEEeCCCCC-eEEEeeCCCcEEEEECCCC
Q psy4579 186 GLSWNPSLNG-YLLSASDDHTICLWDINAT 214 (368)
Q Consensus 186 ~i~~~p~~~~-~l~s~s~dg~i~iwd~~~~ 214 (368)
.+++.|+ ++ ..++-..++.|.+.|....
T Consensus 164 ~~a~~p~-g~~vyv~~~~~~~v~vi~~~~~ 192 (381)
T COG3391 164 GVAVDPD-GNKVYVTNSDDNTVSVIDTSGN 192 (381)
T ss_pred eEEECCC-CCeEEEEecCCCeEEEEeCCCc
Confidence 8999999 66 4555568899999997664
|
|
| >KOG4460|consensus | Back alignment and domain information |
|---|
Probab=84.70 E-value=26 Score=32.83 Aligned_cols=34 Identities=9% Similarity=0.236 Sum_probs=24.6
Q ss_pred ceeEEEEeCCC--CcEEEEecCCCeEEEEECCCCCC
Q psy4579 302 EVNRARYMPQN--PCVIATKTPSSDVLVFDYTKHPS 335 (368)
Q Consensus 302 ~i~~~~~~p~~--~~~lasgs~Dg~i~iwd~~~~~~ 335 (368)
.+..++|+|+. +.-|..-+.|.+||+||+.....
T Consensus 167 tl~Qa~WHP~S~~D~hL~iL~sdnviRiy~lS~~te 202 (741)
T KOG4460|consen 167 TLKQAAWHPSSILDPHLVLLTSDNVIRIYSLSEPTE 202 (741)
T ss_pred eeeeccccCCccCCceEEEEecCcEEEEEecCCcch
Confidence 45678999975 33344557899999999986443
|
|
| >PRK11138 outer membrane biogenesis protein BamB; Provisional | Back alignment and domain information |
|---|
Probab=84.61 E-value=32 Score=31.45 Aligned_cols=59 Identities=8% Similarity=0.107 Sum_probs=37.5
Q ss_pred CeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCC
Q psy4579 142 GYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATP 215 (368)
Q Consensus 142 ~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~ 215 (368)
..+..++.+|.+...|..+++. .... ...... .+.. . ++.++.++.+|.+...|..++.
T Consensus 257 ~~vy~~~~~g~l~ald~~tG~~-------~W~~--~~~~~~---~~~~--~-~~~vy~~~~~g~l~ald~~tG~ 315 (394)
T PRK11138 257 GVVYALAYNGNLVALDLRSGQI-------VWKR--EYGSVN---DFAV--D-GGRIYLVDQNDRVYALDTRGGV 315 (394)
T ss_pred CEEEEEEcCCeEEEEECCCCCE-------EEee--cCCCcc---CcEE--E-CCEEEEEcCCCeEEEEECCCCc
Confidence 4566677889999999988742 1111 111111 2222 2 5677788899999999998773
|
|
| >PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex | Back alignment and domain information |
|---|
Probab=84.54 E-value=33 Score=31.61 Aligned_cols=50 Identities=14% Similarity=0.334 Sum_probs=33.0
Q ss_pred cEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCC
Q psy4579 152 TICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINAT 214 (368)
Q Consensus 152 ~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~ 214 (368)
.|+||+.... ++..+.-..+.+ .++.|..+ ..|+.-..||.+++||+...
T Consensus 62 ~I~iys~sG~--------ll~~i~w~~~~i---v~~~wt~~--e~LvvV~~dG~v~vy~~~G~ 111 (410)
T PF04841_consen 62 SIQIYSSSGK--------LLSSIPWDSGRI---VGMGWTDD--EELVVVQSDGTVRVYDLFGE 111 (410)
T ss_pred EEEEECCCCC--------EeEEEEECCCCE---EEEEECCC--CeEEEEEcCCEEEEEeCCCc
Confidence 4888887654 223322222455 39999874 45667789999999998753
|
Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm |
| >PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length | Back alignment and domain information |
|---|
Probab=84.48 E-value=25 Score=34.12 Aligned_cols=60 Identities=15% Similarity=0.370 Sum_probs=40.1
Q ss_pred eeEEEeC-CCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEe--CCCCCeEEEeeCCCcEEEEECC
Q psy4579 143 YLLSASD-DHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWN--PSLNGYLLSASDDHTICLWDIN 212 (368)
Q Consensus 143 ~lasg~~-dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~--p~~~~~l~s~s~dg~i~iwd~~ 212 (368)
.+|.... ...+.|||.+.+.. +....+ ...+.|. +++|. |+ ++.+++.|..+.|.+|-..
T Consensus 42 k~a~V~~~~~~LtIWD~~~~~l-----E~~~~f-~~~~~I~---dLDWtst~d-~qsiLaVGf~~~v~l~~Q~ 104 (631)
T PF12234_consen 42 KIAVVDSSRSELTIWDTRSGVL-----EYEESF-SEDDPIR---DLDWTSTPD-GQSILAVGFPHHVLLYTQL 104 (631)
T ss_pred cEEEEECCCCEEEEEEcCCcEE-----EEeeee-cCCCcee---eceeeecCC-CCEEEEEEcCcEEEEEEcc
Confidence 4444444 45689999987642 223344 3455665 89985 55 7788888999999999643
|
This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits. |
| >KOG3630|consensus | Back alignment and domain information |
|---|
Probab=84.19 E-value=4.2 Score=41.30 Aligned_cols=76 Identities=14% Similarity=0.167 Sum_probs=55.9
Q ss_pred CCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcE
Q psy4579 127 TDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTI 206 (368)
Q Consensus 127 h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i 206 (368)
......++.|+|.-+...|.+..|+.|++..+...... ...+. -...++ +++|+|. +..++.|-..|++
T Consensus 154 k~vf~~~~~wnP~vp~n~av~l~dlsl~V~~~~~~~~~------v~s~p-~t~~~T---av~WSpr-GKQl~iG~nnGt~ 222 (1405)
T KOG3630|consen 154 KPVFQLKNVWNPLVPLNSAVDLSDLSLRVKSTKQLAQN------VTSFP-VTNSQT---AVLWSPR-GKQLFIGRNNGTE 222 (1405)
T ss_pred cccccccccccCCccchhhhhccccchhhhhhhhhhhh------hcccC-ccccee---eEEeccc-cceeeEecCCCeE
Confidence 34456789999988788899999999999887654321 11122 223333 9999998 9999999999999
Q ss_pred EEEECCC
Q psy4579 207 CLWDINA 213 (368)
Q Consensus 207 ~iwd~~~ 213 (368)
.-|-..-
T Consensus 223 vQy~P~l 229 (1405)
T KOG3630|consen 223 VQYEPSL 229 (1405)
T ss_pred EEeeccc
Confidence 9987543
|
|
| >PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus | Back alignment and domain information |
|---|
Probab=83.98 E-value=8.1 Score=35.43 Aligned_cols=80 Identities=14% Similarity=0.231 Sum_probs=54.8
Q ss_pred ccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeC--CC-C-----
Q psy4579 123 SNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNP--SL-N----- 194 (368)
Q Consensus 123 ~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p--~~-~----- 194 (368)
.+....+.+.+|..+|.+ ++.|+...=|.|.++|+.++. .++.++|..+. .+.|.. +. .
T Consensus 302 ~l~D~~R~~~~i~~sP~~-~laA~tDslGRV~LiD~~~~~-------vvrmWKGYRdA-----qc~wi~~~~~~~~~~~~ 368 (415)
T PF14655_consen 302 GLPDSKREGESICLSPSG-RLAAVTDSLGRVLLIDVARGI-------VVRMWKGYRDA-----QCGWIEVPEEGDRDRSN 368 (415)
T ss_pred eeccCCceEEEEEECCCC-CEEEEEcCCCcEEEEECCCCh-------hhhhhccCccc-----eEEEEEeeccccccccc
Confidence 345567789999999998 888887777999999999874 45666666543 223321 10 1
Q ss_pred -----------C-eEEEeeCCCcEEEEECCCCC
Q psy4579 195 -----------G-YLLSASDDHTICLWDINATP 215 (368)
Q Consensus 195 -----------~-~l~s~s~dg~i~iwd~~~~~ 215 (368)
. +++-+-.-|.|-||.+++++
T Consensus 369 ~~~~~~~~~~~l~LvIyaprRg~lEvW~~~~g~ 401 (415)
T PF14655_consen 369 SNSPKSSSRFALFLVIYAPRRGILEVWSMRQGP 401 (415)
T ss_pred ccccCCCCcceEEEEEEeccCCeEEEEecCCCC
Confidence 0 23445678889999998874
|
|
| >PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs | Back alignment and domain information |
|---|
Probab=83.38 E-value=51 Score=32.87 Aligned_cols=35 Identities=17% Similarity=0.352 Sum_probs=26.1
Q ss_pred CcccceeEEEEeCCC--CcEEEEecCCCeEEEEECCC
Q psy4579 298 NHEGEVNRARYMPQN--PCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 298 ~h~~~i~~~~~~p~~--~~~lasgs~Dg~i~iwd~~~ 332 (368)
.+...|..+.|+|.+ ..-|+.=..|+++|+||+..
T Consensus 144 ~~~~~i~qv~WhP~s~~~~~l~vLtsdn~lR~y~~~~ 180 (717)
T PF10168_consen 144 NSSLEIKQVRWHPWSESDSHLVVLTSDNTLRLYDISD 180 (717)
T ss_pred CCCceEEEEEEcCCCCCCCeEEEEecCCEEEEEecCC
Confidence 345678999999974 13333557899999999974
|
It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells []. |
| >PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=83.01 E-value=33 Score=30.43 Aligned_cols=231 Identities=11% Similarity=0.092 Sum_probs=106.2
Q ss_pred CCCcEEEEEEecCCCccccccCC----cccCCCC-cccCCCCCeeeeecccc-CCCC-ce------eeEecCCCCCeeEE
Q psy4579 80 EQNHLLIASVQLPNEDAQFDASN----YDTDKGG-NVQLPNEDAQFDASNYD-TDKG-GY------GLSWNPSLNGYLLS 146 (368)
Q Consensus 80 ~~~~~~i~~~~~~~~~~~~~~~~----~~~~~~g-~i~i~~~~~~~~~~~~~-h~~~-v~------~l~~sp~~~~~las 146 (368)
.+.......+.+|+.... .+.. ...+.|| .+.++|..+..-.+... ..+. +. |.-.-|.+++-+.+
T Consensus 74 ~~TL~~~~EI~iP~k~R~-~~~~~~~~~~ls~dgk~~~V~N~TPa~SVtVVDl~~~kvv~ei~~PGC~~iyP~~~~~F~~ 152 (342)
T PF06433_consen 74 TQTLSPTGEIEIPPKPRA-QVVPYKNMFALSADGKFLYVQNFTPATSVTVVDLAAKKVVGEIDTPGCWLIYPSGNRGFSM 152 (342)
T ss_dssp TTTTEEEEEEEETTS-B---BS--GGGEEE-TTSSEEEEEEESSSEEEEEEETTTTEEEEEEEGTSEEEEEEEETTEEEE
T ss_pred cCcCcccceEecCCcchh-eecccccceEEccCCcEEEEEccCCCCeEEEEECCCCceeeeecCCCEEEEEecCCCceEE
Confidence 455667888889875211 1111 1223344 45566654321111111 1111 11 22334555567889
Q ss_pred EeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceee
Q psy4579 147 ASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTI 226 (368)
Q Consensus 147 g~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~ 226 (368)
-|.||.+.-..+....+... .....|..-..++- ..-++... +..++--+.+|.|+--|+..... + ....
T Consensus 153 lC~DGsl~~v~Ld~~Gk~~~--~~t~~F~~~~dp~f--~~~~~~~~-~~~~~F~Sy~G~v~~~dlsg~~~--~---~~~~ 222 (342)
T PF06433_consen 153 LCGDGSLLTVTLDADGKEAQ--KSTKVFDPDDDPLF--EHPAYSRD-GGRLYFVSYEGNVYSADLSGDSA--K---FGKP 222 (342)
T ss_dssp EETTSCEEEEEETSTSSEEE--EEEEESSTTTS-B---S--EEETT-TTEEEEEBTTSEEEEEEETTSSE--E---EEEE
T ss_pred EecCCceEEEEECCCCCEeE--eeccccCCCCcccc--cccceECC-CCeEEEEecCCEEEEEeccCCcc--c---ccCc
Confidence 99999999988875443211 11112222222221 13334444 45555568899999888876531 0 1111
Q ss_pred eecccccEeEEEEee---ecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccce
Q psy4579 227 FTGHTAVVEDYSIHR---LILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEV 303 (368)
Q Consensus 227 ~~~~~~~v~~v~~~~---~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i 303 (368)
+.--+..-..-.|.| .+++... ...+++++ +.. +... .+....-.+..+|+.+++.+..+... .++
T Consensus 223 ~~~~t~~e~~~~WrPGG~Q~~A~~~--~~~rlyvL-Mh~---g~~g---sHKdpgteVWv~D~~t~krv~Ri~l~--~~~ 291 (342)
T PF06433_consen 223 WSLLTDAEKADGWRPGGWQLIAYHA--ASGRLYVL-MHQ---GGEG---SHKDPGTEVWVYDLKTHKRVARIPLE--HPI 291 (342)
T ss_dssp EESS-HHHHHTTEEE-SSS-EEEET--TTTEEEEE-EEE-----TT----TTS-EEEEEEEETTTTEEEEEEEEE--EEE
T ss_pred ccccCccccccCcCCcceeeeeecc--ccCeEEEE-ecC---CCCC---CccCCceEEEEEECCCCeEEEEEeCC--Ccc
Confidence 110000000012222 1111111 11233322 110 0000 01111123455677778777776543 458
Q ss_pred eEEEEeCCCC-cEEEEecCCCeEEEEECCC
Q psy4579 304 NRARYMPQNP-CVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 304 ~~~~~~p~~~-~~lasgs~Dg~i~iwd~~~ 332 (368)
.+++.+.+.. .|++....++.+.+||..+
T Consensus 292 ~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~t 321 (342)
T PF06433_consen 292 DSIAVSQDDKPLLYALSAGDGTLDVYDAAT 321 (342)
T ss_dssp SEEEEESSSS-EEEEEETTTTEEEEEETTT
T ss_pred ceEEEccCCCcEEEEEcCCCCeEEEEeCcC
Confidence 8999998764 4444556789999999986
|
4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). |
| >KOG2395|consensus | Back alignment and domain information |
|---|
Probab=82.76 E-value=24 Score=33.08 Aligned_cols=148 Identities=12% Similarity=0.152 Sum_probs=79.5
Q ss_pred eeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCC------CeEEEeeCCCcEEEEECCCCCC
Q psy4579 143 YLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLN------GYLLSASDDHTICLWDINATPK 216 (368)
Q Consensus 143 ~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~------~~l~s~s~dg~i~iwd~~~~~~ 216 (368)
+|.++.....++-.|++.++ .+..++-|.. |+ -+.+.|+.. ..-+.|=.|..|+=||+|-...
T Consensus 348 il~~~~~~~~l~klDIE~GK-------IVeEWk~~~d-i~---mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~ 416 (644)
T KOG2395|consen 348 ILMDGGEQDKLYKLDIERGK-------IVEEWKFEDD-IN---MVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGK 416 (644)
T ss_pred EeeCCCCcCcceeeecccce-------eeeEeeccCC-cc---eeeccCCcchhcccccccEEeecCCceEEecccccCc
Confidence 45556666667777888775 4556665655 32 455666521 1123456788999999986543
Q ss_pred CCccccceeeeecccccEeEEEEeeecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeee
Q psy4579 217 ENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIK 296 (368)
Q Consensus 217 ~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 296 (368)
. .+...++|.- ... .-+.+....+..++.+++ ..|.+.+++. .+...-+..
T Consensus 417 ~-----kl~~~q~kqy-~~k-----~nFsc~aTT~sG~IvvgS-----------------~~GdIRLYdr-i~~~AKTAl 467 (644)
T KOG2395|consen 417 N-----KLAVVQSKQY-STK-----NNFSCFATTESGYIVVGS-----------------LKGDIRLYDR-IGRRAKTAL 467 (644)
T ss_pred c-----eeeeeecccc-ccc-----cccceeeecCCceEEEee-----------------cCCcEEeehh-hhhhhhhcc
Confidence 1 1111222211 111 111111122223444333 3344444444 232222233
Q ss_pred cCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCC
Q psy4579 297 INHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 297 ~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
.+--.+|..+..+.+|..+|+|+ +..+.+-+..-
T Consensus 468 PgLG~~I~hVdvtadGKwil~Tc--~tyLlLi~t~~ 501 (644)
T KOG2395|consen 468 PGLGDAIKHVDVTADGKWILATC--KTYLLLIDTLI 501 (644)
T ss_pred cccCCceeeEEeeccCcEEEEec--ccEEEEEEEec
Confidence 35667999999999998888774 66787777654
|
|
| >PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A | Back alignment and domain information |
|---|
Probab=80.79 E-value=44 Score=30.30 Aligned_cols=174 Identities=10% Similarity=0.076 Sum_probs=76.1
Q ss_pred EecCCCCCeeEEEeCCCc--EEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECC
Q psy4579 135 SWNPSLNGYLLSASDDHT--ICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDIN 212 (368)
Q Consensus 135 ~~sp~~~~~lasg~~dg~--v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~ 212 (368)
+|.++|.++|..+..||. +.+.|+.++. +..+....+.-. +...++|+ +..++-......|.--|++
T Consensus 42 ~ft~dG~kllF~s~~dg~~nly~lDL~t~~--------i~QLTdg~g~~~--~g~~~s~~-~~~~~Yv~~~~~l~~vdL~ 110 (386)
T PF14583_consen 42 CFTDDGRKLLFASDFDGNRNLYLLDLATGE--------ITQLTDGPGDNT--FGGFLSPD-DRALYYVKNGRSLRRVDLD 110 (386)
T ss_dssp -B-TTS-EEEEEE-TTSS-EEEEEETTT-E--------EEE---SS-B-T--TT-EE-TT-SSEEEEEETTTEEEEEETT
T ss_pred CcCCCCCEEEEEeccCCCcceEEEEcccCE--------EEECccCCCCCc--cceEEecC-CCeEEEEECCCeEEEEECC
Confidence 678888666776666765 4555666652 344444432222 36777888 6666555556788888998
Q ss_pred CCCCCCccccceeeeecccccEeEEEEeeecccccCCCCccceEEEEeecC---CcccccccccccC-CCCCcccccCCC
Q psy4579 213 ATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLP---NEDAQFDASNYDT-DKGDFGGFGSVS 288 (368)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~---~~~~~~~~~~~d~-~~~~~~~~~~~~ 288 (368)
+.+. ...+......+-...|.. ..|....+-+...... ..........|.. ....+...++.+
T Consensus 111 T~e~-------~~vy~~p~~~~g~gt~v~------n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~idl~t 177 (386)
T PF14583_consen 111 TLEE-------RVVYEVPDDWKGYGTWVA------NSDCTKLVGIEISREDWKPLTKWKGFREFYEARPHCRIFTIDLKT 177 (386)
T ss_dssp T--E-------EEEEE--TTEEEEEEEEE-------TTSSEEEEEEEEGGG-----SHHHHHHHHHC---EEEEEEETTT
T ss_pred cCcE-------EEEEECCcccccccceee------CCCccEEEEEEEeehhccCccccHHHHHHHhhCCCceEEEEECCC
Confidence 8642 122222233332233321 1121121111111000 0000000111111 112344456666
Q ss_pred CceeeeeecCcccceeEEEEeCCCCcEEEEe---cCCCe-EEEEECCCCC
Q psy4579 289 GKIEIEIKINHEGEVNRARYMPQNPCVIATK---TPSSD-VLVFDYTKHP 334 (368)
Q Consensus 289 ~~~~~~~~~~h~~~i~~~~~~p~~~~~lasg---s~Dg~-i~iwd~~~~~ 334 (368)
|+....+. -...+.-+.|+|..+.+|+-| -.|.. -|||-++..+
T Consensus 178 G~~~~v~~--~~~wlgH~~fsP~dp~li~fCHEGpw~~Vd~RiW~i~~dg 225 (386)
T PF14583_consen 178 GERKVVFE--DTDWLGHVQFSPTDPTLIMFCHEGPWDLVDQRIWTINTDG 225 (386)
T ss_dssp --EEEEEE--ESS-EEEEEEETTEEEEEEEEE-S-TTTSS-SEEEEETTS
T ss_pred CceeEEEe--cCccccCcccCCCCCCEEEEeccCCcceeceEEEEEEcCC
Confidence 66544332 455678899999988888774 33443 4888887544
|
|
| >PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2 | Back alignment and domain information |
|---|
Probab=80.72 E-value=35 Score=29.13 Aligned_cols=59 Identities=14% Similarity=0.118 Sum_probs=33.9
Q ss_pred CeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCC
Q psy4579 142 GYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINAT 214 (368)
Q Consensus 142 ~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~ 214 (368)
.+..-.-.++...+||.++.+ .+..+.-. +. +|.++. + +..|+...-...+..+|..+-
T Consensus 101 ~l~qLTWk~~~~f~yd~~tl~-------~~~~~~y~-~E---GWGLt~--d-g~~Li~SDGS~~L~~~dP~~f 159 (264)
T PF05096_consen 101 KLYQLTWKEGTGFVYDPNTLK-------KIGTFPYP-GE---GWGLTS--D-GKRLIMSDGSSRLYFLDPETF 159 (264)
T ss_dssp EEEEEESSSSEEEEEETTTTE-------EEEEEE-S-SS-----EEEE--C-SSCEEEE-SSSEEEEE-TTT-
T ss_pred EEEEEEecCCeEEEEccccce-------EEEEEecC-Cc---ceEEEc--C-CCEEEEECCccceEEECCccc
Confidence 444455678899999998753 33444322 22 267873 4 555666555778999998765
|
3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X. |
| >KOG4441|consensus | Back alignment and domain information |
|---|
Probab=80.44 E-value=43 Score=32.45 Aligned_cols=123 Identities=7% Similarity=-0.025 Sum_probs=61.0
Q ss_pred cccCCCCCeee--eeccccCCCCceeeEecCCCCCeeEEEeCC-C-----cEEEEeCCCCCCCCcccccceeeeccccce
Q psy4579 110 NVQLPNEDAQF--DASNYDTDKGGYGLSWNPSLNGYLLSASDD-H-----TICLWDINATPKENRVIDAKTIFTGHTAVV 181 (368)
Q Consensus 110 ~i~i~~~~~~~--~~~~~~h~~~v~~l~~sp~~~~~lasg~~d-g-----~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v 181 (368)
.+..+|..... ......+.+.-.+++...+ .+.++|+.| | ++..||..+.. ......+.......
T Consensus 302 ~ve~yd~~~~~w~~~a~m~~~r~~~~~~~~~~--~lYv~GG~~~~~~~l~~ve~YD~~~~~-----W~~~a~M~~~R~~~ 374 (571)
T KOG4441|consen 302 SVECYDPKTNEWSSLAPMPSPRCRVGVAVLNG--KLYVVGGYDSGSDRLSSVERYDPRTNQ-----WTPVAPMNTKRSDF 374 (571)
T ss_pred eeEEecCCcCcEeecCCCCcccccccEEEECC--EEEEEccccCCCcccceEEEecCCCCc-----eeccCCccCccccc
Confidence 44455554431 2222334444555555543 788999988 3 46677776542 00111111111111
Q ss_pred ecceeeEEeCCCCCeEEEeeCCCc-----EEEEECCCCCCCCccccceeeeecccccEeEEEEeeecccccCCC
Q psy4579 182 EVRYGLSWNPSLNGYLLSASDDHT-----ICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSD 250 (368)
Q Consensus 182 ~~~~~i~~~p~~~~~l~s~s~dg~-----i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d 250 (368)
+++-. + +.+.|.||.||. |-.||.++. .|...............+.+...+...++.+
T Consensus 375 ----~v~~l-~-g~iYavGG~dg~~~l~svE~YDp~~~-----~W~~va~m~~~r~~~gv~~~~g~iYi~GG~~ 437 (571)
T KOG4441|consen 375 ----GVAVL-D-GKLYAVGGFDGEKSLNSVECYDPVTN-----KWTPVAPMLTRRSGHGVAVLGGKLYIIGGGD 437 (571)
T ss_pred ----eeEEE-C-CEEEEEeccccccccccEEEecCCCC-----cccccCCCCcceeeeEEEEECCEEEEEcCcC
Confidence 33333 2 788899999974 666666654 2333333322233334445555555555443
|
|
| >COG3204 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=80.43 E-value=38 Score=29.33 Aligned_cols=178 Identities=11% Similarity=0.132 Sum_probs=88.6
Q ss_pred ccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCccccccee--eeccccceecceeeEEeCCCCCeEEEeeC
Q psy4579 125 YDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTI--FTGHTAVVEVRYGLSWNPSLNGYLLSASD 202 (368)
Q Consensus 125 ~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~--~~~h~~~v~~~~~i~~~p~~~~~l~s~s~ 202 (368)
.+-...|.++.|+|+. +.|.+......-.++=...+. .+.. +.+-.++= +|.|..+ +.+.++--.
T Consensus 82 ~g~~~nvS~LTynp~~-rtLFav~n~p~~iVElt~~Gd-------lirtiPL~g~~DpE----~Ieyig~-n~fvi~dER 148 (316)
T COG3204 82 LGETANVSSLTYNPDT-RTLFAVTNKPAAIVELTKEGD-------LIRTIPLTGFSDPE----TIEYIGG-NQFVIVDER 148 (316)
T ss_pred ccccccccceeeCCCc-ceEEEecCCCceEEEEecCCc-------eEEEecccccCChh----HeEEecC-CEEEEEehh
Confidence 4445569999999998 666666655555555433343 2232 23333332 7888876 777777777
Q ss_pred CCcEEEEECCCCCCCCccccceeeeec--c-cccEeEEEEeeecccccCCCCccceEEEEeecCCcccccccccccCCCC
Q psy4579 203 DHTICLWDINATPKENRVIDAKTIFTG--H-TAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKG 279 (368)
Q Consensus 203 dg~i~iwd~~~~~~~~~~~~~~~~~~~--~-~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 279 (368)
++.+.+.-+...............+.. + ......++|.+ .+.++|+..-. +...+..++....
T Consensus 149 ~~~l~~~~vd~~t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~---------~~~~l~~aKEr-----~P~~I~~~~~~~~ 214 (316)
T COG3204 149 DRALYLFTVDADTTVISAKVQKIPLGTTNKKNKGFEGLAWDP---------VDHRLFVAKER-----NPIGIFEVTQSPS 214 (316)
T ss_pred cceEEEEEEcCCccEEeccceEEeccccCCCCcCceeeecCC---------CCceEEEEEcc-----CCcEEEEEecCCc
Confidence 888888876554321111111111111 1 33445566654 22334433311 1111100100000
Q ss_pred CcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCC
Q psy4579 280 DFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
.+..-.......... -.-..|.++.|++..+.+|+-+.+++.+--.|..-
T Consensus 215 ~l~~~~~~~~~~~~~---~f~~DvSgl~~~~~~~~LLVLS~ESr~l~Evd~~G 264 (316)
T COG3204 215 SLSVHASLDPTADRD---LFVLDVSGLEFNAITNSLLVLSDESRRLLEVDLSG 264 (316)
T ss_pred ccccccccCcccccc---eEeeccccceecCCCCcEEEEecCCceEEEEecCC
Confidence 000000000000000 01246888999987768888888888888888763
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 368 | ||||
| 3gfc_A | 425 | Crystal Structure Of Histone-Binding Protein Rbbp4 | 3e-64 | ||
| 3c99_A | 432 | Structural Basis Of Histone H4 Recognition By P55 L | 1e-62 | ||
| 2xyi_A | 430 | Crystal Structure Of Nurf55 In Complex With A H4 Pe | 1e-62 | ||
| 2yba_A | 422 | Crystal Structure Of Nurf55 In Complex With Histone | 1e-62 | ||
| 3cfs_B | 414 | Structural Basis Of The Interaction Of Rbap46RBAP48 | 2e-58 | ||
| 3cfv_B | 414 | Structural Basis Of The Interaction Of Rbap46RBAP48 | 2e-57 | ||
| 2aq5_A | 402 | Crystal Structure Of Murine Coronin-1 Length = 402 | 2e-04 | ||
| 2b4e_A | 402 | Crystal Structure Of Murine Coronin-1: Monoclinic F | 4e-04 |
| >pdb|3GFC|A Chain A, Crystal Structure Of Histone-Binding Protein Rbbp4 Length = 425 | Back alignment and structure |
|
| >pdb|3C99|A Chain A, Structural Basis Of Histone H4 Recognition By P55 Length = 432 | Back alignment and structure |
|
| >pdb|2XYI|A Chain A, Crystal Structure Of Nurf55 In Complex With A H4 Peptide Length = 430 | Back alignment and structure |
|
| >pdb|2YBA|A Chain A, Crystal Structure Of Nurf55 In Complex With Histone H3 Length = 422 | Back alignment and structure |
|
| >pdb|3CFS|B Chain B, Structural Basis Of The Interaction Of Rbap46RBAP48 WITH Histone H4 Length = 414 | Back alignment and structure |
|
| >pdb|3CFV|B Chain B, Structural Basis Of The Interaction Of Rbap46RBAP48 WITH Histone H4 Length = 414 | Back alignment and structure |
|
| >pdb|2AQ5|A Chain A, Crystal Structure Of Murine Coronin-1 Length = 402 | Back alignment and structure |
|
| >pdb|2B4E|A Chain A, Crystal Structure Of Murine Coronin-1: Monoclinic Form Length = 402 | Back alignment and structure |
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 368 | |||
| 2xyi_A | 430 | Probable histone-binding protein CAF1; transcripti | 100.0 | |
| 4gqb_B | 344 | Methylosome protein 50; TIM barrel, beta-propeller | 100.0 | |
| 1vyh_C | 410 | Platelet-activating factor acetylhydrolase IB alph | 100.0 | |
| 2ynn_A | 304 | Coatomer subunit beta'; protein transport, peptide | 100.0 | |
| 4g56_B | 357 | MGC81050 protein; protein arginine methyltransfera | 100.0 | |
| 3ow8_A | 321 | WD repeat-containing protein 61; structural genomi | 100.0 | |
| 1nr0_A | 611 | Actin interacting protein 1; beta propeller, WD40 | 100.0 | |
| 1got_B | 340 | GT-beta; complex (GTP-binding/transducer), G prote | 100.0 | |
| 4gqb_B | 344 | Methylosome protein 50; TIM barrel, beta-propeller | 100.0 | |
| 3fm0_A | 345 | Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r | 100.0 | |
| 2pbi_B | 354 | Guanine nucleotide-binding protein subunit beta 5; | 100.0 | |
| 3iz6_a | 380 | 40S ribosomal protein RACK1 (RACK1); eukaryotic ri | 100.0 | |
| 1nr0_A | 611 | Actin interacting protein 1; beta propeller, WD40 | 100.0 | |
| 3ow8_A | 321 | WD repeat-containing protein 61; structural genomi | 100.0 | |
| 2ymu_A | 577 | WD-40 repeat protein; unknown function, two domain | 100.0 | |
| 3fm0_A | 345 | Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r | 100.0 | |
| 2hes_X | 330 | YDR267CP; beta-propeller, WD40 repeat, biosyntheti | 100.0 | |
| 1vyh_C | 410 | Platelet-activating factor acetylhydrolase IB alph | 99.98 | |
| 1erj_A | 393 | Transcriptional repressor TUP1; beta-propeller, tr | 99.98 | |
| 1got_B | 340 | GT-beta; complex (GTP-binding/transducer), G prote | 99.98 | |
| 4ery_A | 312 | WD repeat-containing protein 5; WD40, WIN motif, b | 99.97 | |
| 2ymu_A | 577 | WD-40 repeat protein; unknown function, two domain | 99.97 | |
| 2pm7_B | 297 | Protein transport protein SEC13, protein transport | 99.97 | |
| 4g56_B | 357 | MGC81050 protein; protein arginine methyltransfera | 99.97 | |
| 2pm9_A | 416 | Protein WEB1, protein transport protein SEC31; bet | 99.97 | |
| 3iz6_a | 380 | 40S ribosomal protein RACK1 (RACK1); eukaryotic ri | 99.97 | |
| 2pm9_A | 416 | Protein WEB1, protein transport protein SEC31; bet | 99.97 | |
| 4e54_B | 435 | DNA damage-binding protein 2; beta barrel, double | 99.97 | |
| 1r5m_A | 425 | SIR4-interacting protein SIF2; transcription corep | 99.97 | |
| 2ynn_A | 304 | Coatomer subunit beta'; protein transport, peptide | 99.97 | |
| 3frx_A | 319 | Guanine nucleotide-binding protein subunit beta- l | 99.97 | |
| 2hes_X | 330 | YDR267CP; beta-propeller, WD40 repeat, biosyntheti | 99.97 | |
| 3vl1_A | 420 | 26S proteasome regulatory subunit RPN14; beta-prop | 99.97 | |
| 2pbi_B | 354 | Guanine nucleotide-binding protein subunit beta 5; | 99.97 | |
| 2j04_B | 524 | YDR362CP, TAU91; beta propeller, type 2 promoters, | 99.97 | |
| 3bg1_A | 316 | Protein SEC13 homolog; NPC, transport, WD repeat, | 99.97 | |
| 3frx_A | 319 | Guanine nucleotide-binding protein subunit beta- l | 99.97 | |
| 2xzm_R | 343 | RACK1; ribosome, translation; 3.93A {Tetrahymena t | 99.97 | |
| 1gxr_A | 337 | ESG1, transducin-like enhancer protein 1; transcri | 99.97 | |
| 2pm7_B | 297 | Protein transport protein SEC13, protein transport | 99.96 | |
| 4h5i_A | 365 | Guanine nucleotide-exchange factor SEC12; copii ve | 99.96 | |
| 3ei3_B | 383 | DNA damage-binding protein 2; UV-damage, DDB, nucl | 99.96 | |
| 1erj_A | 393 | Transcriptional repressor TUP1; beta-propeller, tr | 99.96 | |
| 3i2n_A | 357 | WD repeat-containing protein 92; WD40 repeats, str | 99.96 | |
| 4gga_A | 420 | P55CDC, cell division cycle protein 20 homolog; ce | 99.96 | |
| 3dwl_C | 377 | Actin-related protein 2/3 complex subunit 1; prope | 99.96 | |
| 4a11_B | 408 | DNA excision repair protein ERCC-8; DNA binding pr | 99.96 | |
| 3k26_A | 366 | Polycomb protein EED; WD40, structural genomics, N | 99.96 | |
| 2xzm_R | 343 | RACK1; ribosome, translation; 3.93A {Tetrahymena t | 99.96 | |
| 2j04_B | 524 | YDR362CP, TAU91; beta propeller, type 2 promoters, | 99.96 | |
| 2aq5_A | 402 | Coronin-1A; WD40 repeat, 7-bladed beta-propeller, | 99.96 | |
| 2j04_A | 588 | TAU60, YPL007P, hypothetical protein YPL007C; beta | 99.96 | |
| 1sq9_A | 397 | Antiviral protein SKI8; WD repeat, beta-transducin | 99.96 | |
| 3bg1_A | 316 | Protein SEC13 homolog; NPC, transport, WD repeat, | 99.96 | |
| 3dw8_B | 447 | Serine/threonine-protein phosphatase 2A 55 kDa RE | 99.96 | |
| 4aez_A | 401 | CDC20, WD repeat-containing protein SLP1; cell cyc | 99.96 | |
| 1k8k_C | 372 | P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta- | 99.95 | |
| 3jrp_A | 379 | Fusion protein of protein transport protein SEC13 | 99.95 | |
| 3v7d_B | 464 | Cell division control protein 4; WD 40 domain, pho | 99.95 | |
| 3vl1_A | 420 | 26S proteasome regulatory subunit RPN14; beta-prop | 99.95 | |
| 1gxr_A | 337 | ESG1, transducin-like enhancer protein 1; transcri | 99.95 | |
| 3dm0_A | 694 | Maltose-binding periplasmic protein fused with RAC | 99.95 | |
| 4aow_A | 340 | Guanine nucleotide-binding protein subunit beta-2; | 99.95 | |
| 3dwl_C | 377 | Actin-related protein 2/3 complex subunit 1; prope | 99.95 | |
| 4ery_A | 312 | WD repeat-containing protein 5; WD40, WIN motif, b | 99.95 | |
| 3gre_A | 437 | Serine/threonine-protein kinase VPS15; seven-blade | 99.95 | |
| 3sfz_A | 1249 | APAF-1, apoptotic peptidase activating factor 1; a | 99.95 | |
| 4aez_A | 401 | CDC20, WD repeat-containing protein SLP1; cell cyc | 99.95 | |
| 3f3f_A | 351 | Nucleoporin SEH1; structural protein, protein comp | 99.95 | |
| 4ggc_A | 318 | P55CDC, cell division cycle protein 20 homolog; ce | 99.95 | |
| 3mkq_A | 814 | Coatomer beta'-subunit; beta-propeller, alpha-sole | 99.95 | |
| 3zwl_B | 369 | Eukaryotic translation initiation factor 3 subuni; | 99.95 | |
| 1k8k_C | 372 | P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta- | 99.95 | |
| 1yfq_A | 342 | Cell cycle arrest protein BUB3; WD repeat WD40 rep | 99.95 | |
| 1pgu_A | 615 | Actin interacting protein 1; WD repeat, seven-blad | 99.95 | |
| 1p22_A | 435 | F-BOX/WD-repeat protein 1A; ubiquitination, degrad | 99.95 | |
| 2xyi_A | 430 | Probable histone-binding protein CAF1; transcripti | 99.95 | |
| 3zwl_B | 369 | Eukaryotic translation initiation factor 3 subuni; | 99.95 | |
| 2oaj_A | 902 | Protein SNI1; WD40 repeat, beta propeller, endocyt | 99.95 | |
| 4gga_A | 420 | P55CDC, cell division cycle protein 20 homolog; ce | 99.95 | |
| 4e54_B | 435 | DNA damage-binding protein 2; beta barrel, double | 99.94 | |
| 1pgu_A | 615 | Actin interacting protein 1; WD repeat, seven-blad | 99.94 | |
| 3odt_A | 313 | Protein DOA1; ubiquitin, nuclear protein; HET: MSE | 99.94 | |
| 1r5m_A | 425 | SIR4-interacting protein SIF2; transcription corep | 99.94 | |
| 4aow_A | 340 | Guanine nucleotide-binding protein subunit beta-2; | 99.94 | |
| 3i2n_A | 357 | WD repeat-containing protein 92; WD40 repeats, str | 99.94 | |
| 2oaj_A | 902 | Protein SNI1; WD40 repeat, beta propeller, endocyt | 99.94 | |
| 3k26_A | 366 | Polycomb protein EED; WD40, structural genomics, N | 99.94 | |
| 4h5i_A | 365 | Guanine nucleotide-exchange factor SEC12; copii ve | 99.94 | |
| 2ovr_B | 445 | FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 | 99.94 | |
| 3odt_A | 313 | Protein DOA1; ubiquitin, nuclear protein; HET: MSE | 99.94 | |
| 3dm0_A | 694 | Maltose-binding periplasmic protein fused with RAC | 99.94 | |
| 1sq9_A | 397 | Antiviral protein SKI8; WD repeat, beta-transducin | 99.94 | |
| 4ggc_A | 318 | P55CDC, cell division cycle protein 20 homolog; ce | 99.94 | |
| 3mmy_A | 368 | MRNA export factor; mRNA export, nuclear protein; | 99.94 | |
| 3jro_A | 753 | Fusion protein of protein transport protein SEC13 | 99.94 | |
| 3gre_A | 437 | Serine/threonine-protein kinase VPS15; seven-blade | 99.94 | |
| 3sfz_A | 1249 | APAF-1, apoptotic peptidase activating factor 1; a | 99.94 | |
| 2aq5_A | 402 | Coronin-1A; WD40 repeat, 7-bladed beta-propeller, | 99.93 | |
| 2w18_A | 356 | PALB2, fancn, partner and localizer of BRCA2; fanc | 99.93 | |
| 2vdu_B | 450 | TRNA (guanine-N(7)-)-methyltransferase- associated | 99.93 | |
| 2j04_A | 588 | TAU60, YPL007P, hypothetical protein YPL007C; beta | 99.93 | |
| 3jrp_A | 379 | Fusion protein of protein transport protein SEC13 | 99.93 | |
| 3v7d_B | 464 | Cell division control protein 4; WD 40 domain, pho | 99.93 | |
| 3f3f_A | 351 | Nucleoporin SEH1; structural protein, protein comp | 99.93 | |
| 4gq1_A | 393 | NUP37; propeller, transport protein; 2.40A {Schizo | 99.93 | |
| 1p22_A | 435 | F-BOX/WD-repeat protein 1A; ubiquitination, degrad | 99.93 | |
| 3ei3_B | 383 | DNA damage-binding protein 2; UV-damage, DDB, nucl | 99.92 | |
| 3vu4_A | 355 | KMHSV2; beta-propeller fold, protein transport; 2. | 99.92 | |
| 3lrv_A | 343 | PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu | 99.92 | |
| 3jro_A | 753 | Fusion protein of protein transport protein SEC13 | 99.91 | |
| 2ovr_B | 445 | FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 | 99.91 | |
| 4a11_B | 408 | DNA excision repair protein ERCC-8; DNA binding pr | 99.91 | |
| 3mkq_A | 814 | Coatomer beta'-subunit; beta-propeller, alpha-sole | 99.91 | |
| 1yfq_A | 342 | Cell cycle arrest protein BUB3; WD repeat WD40 rep | 99.91 | |
| 3dw8_B | 447 | Serine/threonine-protein phosphatase 2A 55 kDa RE | 99.9 | |
| 1l0q_A | 391 | Surface layer protein; SLP, S-layer, 7-bladed beta | 99.89 | |
| 4gq1_A | 393 | NUP37; propeller, transport protein; 2.40A {Schizo | 99.89 | |
| 2vdu_B | 450 | TRNA (guanine-N(7)-)-methyltransferase- associated | 99.88 | |
| 3vu4_A | 355 | KMHSV2; beta-propeller fold, protein transport; 2. | 99.87 | |
| 3lrv_A | 343 | PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu | 99.87 | |
| 3mmy_A | 368 | MRNA export factor; mRNA export, nuclear protein; | 99.87 | |
| 3bws_A | 433 | Protein LP49; two-domain, immunoglobulin-like, 7-b | 99.86 | |
| 1l0q_A | 391 | Surface layer protein; SLP, S-layer, 7-bladed beta | 99.84 | |
| 3bws_A | 433 | Protein LP49; two-domain, immunoglobulin-like, 7-b | 99.84 | |
| 2hqs_A | 415 | Protein TOLB; TOLB, PAL, TOL, transport protein-li | 99.84 | |
| 2w18_A | 356 | PALB2, fancn, partner and localizer of BRCA2; fanc | 99.83 | |
| 2oit_A | 434 | Nucleoporin 214KDA; NH2 terminal domain of NUP214/ | 99.77 | |
| 2oit_A | 434 | Nucleoporin 214KDA; NH2 terminal domain of NUP214/ | 99.76 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 99.75 | |
| 1ri6_A | 343 | Putative isomerase YBHE; 7-bladed propeller, enzym | 99.74 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 99.73 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 99.73 | |
| 2ojh_A | 297 | Uncharacterized protein ATU1656/AGR_C_3050; TOLB, | 99.72 | |
| 2ojh_A | 297 | Uncharacterized protein ATU1656/AGR_C_3050; TOLB, | 99.7 | |
| 1nir_A | 543 | Nitrite reductase; hemoprotein, denitrification, d | 99.7 | |
| 2hqs_A | 415 | Protein TOLB; TOLB, PAL, TOL, transport protein-li | 99.68 | |
| 3vgz_A | 353 | Uncharacterized protein YNCE; beta-propeller, prot | 99.67 | |
| 3u4y_A | 331 | Uncharacterized protein; structural genomics, PSI- | 99.67 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 99.67 | |
| 1nir_A | 543 | Nitrite reductase; hemoprotein, denitrification, d | 99.66 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 99.65 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 99.64 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 99.62 | |
| 1k32_A | 1045 | Tricorn protease; protein degradation, substrate g | 99.62 | |
| 1k32_A | 1045 | Tricorn protease; protein degradation, substrate g | 99.61 | |
| 1ri6_A | 343 | Putative isomerase YBHE; 7-bladed propeller, enzym | 99.57 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 99.56 | |
| 3u4y_A | 331 | Uncharacterized protein; structural genomics, PSI- | 99.56 | |
| 3scy_A | 361 | Hypothetical bacterial 6-phosphogluconolactonase; | 99.54 | |
| 3vgz_A | 353 | Uncharacterized protein YNCE; beta-propeller, prot | 99.52 | |
| 1pby_B | 337 | Quinohemoprotein amine dehydrogenase 40 kDa subuni | 99.51 | |
| 1jmx_B | 349 | Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; | 99.5 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 99.5 | |
| 3hfq_A | 347 | Uncharacterized protein LP_2219; Q88V64_lacpl, NES | 99.47 | |
| 3hfq_A | 347 | Uncharacterized protein LP_2219; Q88V64_lacpl, NES | 99.47 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 99.43 | |
| 1pby_B | 337 | Quinohemoprotein amine dehydrogenase 40 kDa subuni | 99.42 | |
| 3fvz_A | 329 | Peptidyl-glycine alpha-amidating monooxygenase; be | 99.4 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 99.37 | |
| 3pe7_A | 388 | Oligogalacturonate lyase; seven-bladed beta-propel | 99.37 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 99.33 | |
| 3pe7_A | 388 | Oligogalacturonate lyase; seven-bladed beta-propel | 99.32 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 99.31 | |
| 1jmx_B | 349 | Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; | 99.31 | |
| 1q7f_A | 286 | NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL | 99.3 | |
| 3scy_A | 361 | Hypothetical bacterial 6-phosphogluconolactonase; | 99.29 | |
| 1jof_A | 365 | Carboxy-CIS,CIS-muconate cyclase; beta-propeller, | 99.28 | |
| 3c5m_A | 396 | Oligogalacturonate lyase; blade-shaped beta-propel | 99.17 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 99.13 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 99.11 | |
| 1jof_A | 365 | Carboxy-CIS,CIS-muconate cyclase; beta-propeller, | 99.11 | |
| 2dg1_A | 333 | DRP35, lactonase; beta propeller, hydrolase; 1.72A | 99.11 | |
| 2gop_A | 347 | Trilobed protease; beta propeller, open velcro, hy | 99.1 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 99.1 | |
| 1rwi_B | 270 | Serine/threonine-protein kinase PKND; beta propell | 99.07 | |
| 1q7f_A | 286 | NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL | 99.04 | |
| 2oiz_A | 361 | Aromatic amine dehydrogenase, large subunit; oxido | 99.03 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 99.02 | |
| 1xip_A | 388 | Nucleoporin NUP159; beta-propeller, transport prot | 99.02 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 99.01 | |
| 3fvz_A | 329 | Peptidyl-glycine alpha-amidating monooxygenase; be | 98.99 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 98.95 | |
| 2gop_A | 347 | Trilobed protease; beta propeller, open velcro, hy | 98.95 | |
| 2z2n_A | 299 | Virginiamycin B lyase; seven-bladed beta-propeller | 98.91 | |
| 2dg1_A | 333 | DRP35, lactonase; beta propeller, hydrolase; 1.72A | 98.88 | |
| 3e5z_A | 296 | Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco | 98.85 | |
| 3c5m_A | 396 | Oligogalacturonate lyase; blade-shaped beta-propel | 98.82 | |
| 3e5z_A | 296 | Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco | 98.8 | |
| 1pjx_A | 314 | Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries | 98.78 | |
| 1rwi_B | 270 | Serine/threonine-protein kinase PKND; beta propell | 98.77 | |
| 1qks_A | 567 | Cytochrome CD1 nitrite reductase; enzyme, oxidored | 98.76 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 98.7 | |
| 2qc5_A | 300 | Streptogramin B lactonase; beta propeller, lyase; | 98.68 | |
| 3dsm_A | 328 | Uncharacterized protein bacuni_02894; seven_blated | 98.63 | |
| 1xip_A | 388 | Nucleoporin NUP159; beta-propeller, transport prot | 98.56 | |
| 3dsm_A | 328 | Uncharacterized protein bacuni_02894; seven_blated | 98.56 | |
| 2z2n_A | 299 | Virginiamycin B lyase; seven-bladed beta-propeller | 98.52 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 98.5 | |
| 3no2_A | 276 | Uncharacterized protein; six-bladed beta-propeller | 98.5 | |
| 1pjx_A | 314 | Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries | 98.5 | |
| 3g4e_A | 297 | Regucalcin; six bladed beta-propeller, gluconolcat | 98.44 | |
| 3no2_A | 276 | Uncharacterized protein; six-bladed beta-propeller | 98.4 | |
| 3g4e_A | 297 | Regucalcin; six bladed beta-propeller, gluconolcat | 98.4 | |
| 3hrp_A | 409 | Uncharacterized protein; NP_812590.1, structural g | 98.36 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 98.34 | |
| 3hrp_A | 409 | Uncharacterized protein; NP_812590.1, structural g | 98.34 | |
| 2oiz_A | 361 | Aromatic amine dehydrogenase, large subunit; oxido | 98.3 | |
| 2mad_H | 373 | Methylamine dehydrogenase (heavy subunit); oxidore | 98.28 | |
| 2qc5_A | 300 | Streptogramin B lactonase; beta propeller, lyase; | 98.26 | |
| 2ghs_A | 326 | AGR_C_1268P; regucalcin, structural genomics, join | 98.22 | |
| 3sjl_D | 386 | Methylamine dehydrogenase heavy chain; MAUG, C-hem | 98.21 | |
| 1qks_A | 567 | Cytochrome CD1 nitrite reductase; enzyme, oxidored | 98.17 | |
| 2ghs_A | 326 | AGR_C_1268P; regucalcin, structural genomics, join | 98.1 | |
| 2mad_H | 373 | Methylamine dehydrogenase (heavy subunit); oxidore | 97.92 | |
| 3dr2_A | 305 | Exported gluconolactonase; gluconolactonase SMP-30 | 97.91 | |
| 1mda_H | 368 | Methylamine dehydrogenase (heavy subunit); electro | 97.86 | |
| 3c75_H | 426 | MADH, methylamine dehydrogenase heavy chain; coppe | 97.84 | |
| 2hz6_A | 369 | Endoplasmic reticulum to nucleus signalling 1 isof | 97.81 | |
| 2iwa_A | 266 | Glutamine cyclotransferase; pyroglutamate, acyltra | 97.75 | |
| 3dr2_A | 305 | Exported gluconolactonase; gluconolactonase SMP-30 | 97.66 | |
| 3nok_A | 268 | Glutaminyl cyclase; beta-propeller, cyclotransfera | 97.58 | |
| 2qe8_A | 343 | Uncharacterized protein; structural genomics, join | 97.53 | |
| 2qe8_A | 343 | Uncharacterized protein; structural genomics, join | 97.5 | |
| 3mbr_X | 243 | Glutamine cyclotransferase; beta-propeller; 1.44A | 97.46 | |
| 1npe_A | 267 | Nidogen, entactin; glycoprotein, basement membrane | 97.4 | |
| 2hz6_A | 369 | Endoplasmic reticulum to nucleus signalling 1 isof | 97.39 | |
| 3nol_A | 262 | Glutamine cyclotransferase; beta-propeller, glutam | 97.39 | |
| 3nol_A | 262 | Glutamine cyclotransferase; beta-propeller, glutam | 97.33 | |
| 2iwa_A | 266 | Glutamine cyclotransferase; pyroglutamate, acyltra | 97.28 | |
| 3mbr_X | 243 | Glutamine cyclotransferase; beta-propeller; 1.44A | 97.15 | |
| 3v65_B | 386 | Low-density lipoprotein receptor-related protein; | 97.1 | |
| 3nok_A | 268 | Glutaminyl cyclase; beta-propeller, cyclotransfera | 97.06 | |
| 3v64_C | 349 | Agrin; beta propeller, laminin-G, signaling, prote | 97.04 | |
| 3hxj_A | 330 | Pyrrolo-quinoline quinone; all beta protein. incom | 96.97 | |
| 1kb0_A | 677 | Quinohemoprotein alcohol dehydrogenase; beta-prope | 96.95 | |
| 3hxj_A | 330 | Pyrrolo-quinoline quinone; all beta protein. incom | 96.86 | |
| 1npe_A | 267 | Nidogen, entactin; glycoprotein, basement membrane | 96.81 | |
| 2ece_A | 462 | 462AA long hypothetical selenium-binding protein; | 96.78 | |
| 1ijq_A | 316 | LDL receptor, low-density lipoprotein receptor; be | 96.74 | |
| 2ece_A | 462 | 462AA long hypothetical selenium-binding protein; | 96.72 | |
| 1yiq_A | 689 | Quinohemoprotein alcohol dehydrogenase; electron t | 96.62 | |
| 3sjl_D | 386 | Methylamine dehydrogenase heavy chain; MAUG, C-hem | 96.58 | |
| 3v65_B | 386 | Low-density lipoprotein receptor-related protein; | 96.55 | |
| 3p5b_L | 400 | Low density lipoprotein receptor variant; B-propel | 96.45 | |
| 1n7d_A | 699 | LDL receptor, low-density lipoprotein receptor; fa | 96.39 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 96.38 | |
| 3q7m_A | 376 | Lipoprotein YFGL, BAMB; beta-propeller, BAM comple | 96.29 | |
| 2fp8_A | 322 | Strictosidine synthase; six bladed beta propeller | 96.21 | |
| 3m0c_C | 791 | LDL receptor, low-density lipoprotein receptor; pr | 96.03 | |
| 3qqz_A | 255 | Putative uncharacterized protein YJIK; MCSG, PSI-2 | 95.99 | |
| 2fp8_A | 322 | Strictosidine synthase; six bladed beta propeller | 95.68 | |
| 3tc9_A | 430 | Hypothetical hydrolase; 6-bladed beta-propeller, i | 95.55 | |
| 3q7m_A | 376 | Lipoprotein YFGL, BAMB; beta-propeller, BAM comple | 95.43 | |
| 3c75_H | 426 | MADH, methylamine dehydrogenase heavy chain; coppe | 95.42 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 95.33 | |
| 1mda_H | 368 | Methylamine dehydrogenase (heavy subunit); electro | 95.11 | |
| 3amr_A | 355 | 3-phytase; beta-propeller, phytate, MYO-inositol h | 94.93 | |
| 3v64_C | 349 | Agrin; beta propeller, laminin-G, signaling, prote | 94.9 | |
| 1fwx_A | 595 | Nitrous oxide reductase; beta-propeller domain, cu | 94.53 | |
| 1kb0_A | 677 | Quinohemoprotein alcohol dehydrogenase; beta-prope | 94.52 | |
| 3qqz_A | 255 | Putative uncharacterized protein YJIK; MCSG, PSI-2 | 94.22 | |
| 3s94_A | 619 | LRP-6, low-density lipoprotein receptor-related pr | 93.96 | |
| 1kv9_A | 668 | Type II quinohemoprotein alcohol dehydrogenase; el | 93.86 | |
| 4a2l_A | 795 | BT_4663, two-component system sensor histidine kin | 93.86 | |
| 4hw6_A | 433 | Hypothetical protein, IPT/TIG domain protein; puta | 93.74 | |
| 3m0c_C | 791 | LDL receptor, low-density lipoprotein receptor; pr | 93.62 | |
| 1n7d_A | 699 | LDL receptor, low-density lipoprotein receptor; fa | 93.46 | |
| 2p4o_A | 306 | Hypothetical protein; putative lactonase, structur | 93.29 | |
| 2ad6_A | 571 | Methanol dehydrogenase subunit 1; PQQ configuratio | 93.26 | |
| 3sov_A | 318 | LRP-6, low-density lipoprotein receptor-related pr | 92.84 | |
| 2p4o_A | 306 | Hypothetical protein; putative lactonase, structur | 92.54 | |
| 1yiq_A | 689 | Quinohemoprotein alcohol dehydrogenase; electron t | 91.47 | |
| 3pbp_A | 452 | Nucleoporin NUP82; beta-propeller, mRNA export, mR | 91.44 | |
| 1ijq_A | 316 | LDL receptor, low-density lipoprotein receptor; be | 91.28 | |
| 1fwx_A | 595 | Nitrous oxide reductase; beta-propeller domain, cu | 90.82 | |
| 1k3i_A | 656 | Galactose oxidase precursor; blade beta propeller, | 90.55 | |
| 1flg_A | 582 | Protein (quinoprotein ethanol dehydrogenase); supe | 90.48 | |
| 3sre_A | 355 | PON1, serum paraoxonase; directed evolution, 6-bla | 90.29 | |
| 3das_A | 347 | Putative oxidoreductase; aldose sugar dehydrogenas | 90.23 | |
| 2p9w_A | 334 | MAL S 1 allergenic protein; beta propeller; 1.35A | 89.87 | |
| 3tc9_A | 430 | Hypothetical hydrolase; 6-bladed beta-propeller, i | 89.08 | |
| 4a0p_A | 628 | LRP6, LRP-6, low-density lipoprotein receptor-rela | 88.81 | |
| 3kya_A | 496 | Putative phosphatase; structural genomics, joint c | 88.31 | |
| 2wg3_C | 463 | Hedgehog-interacting protein; lipoprotein, develop | 85.15 | |
| 3p5b_L | 400 | Low density lipoprotein receptor variant; B-propel | 85.01 | |
| 3a9g_A | 354 | Putative uncharacterized protein; PQQ dependent de | 84.61 | |
| 2g8s_A | 353 | Glucose/sorbosone dehydrogenases; bladed beta-prop | 83.89 | |
| 3pbp_A | 452 | Nucleoporin NUP82; beta-propeller, mRNA export, mR | 83.88 | |
| 1w6s_A | 599 | Methanol dehydrogenase subunit 1; anisotropic, ele | 83.56 | |
| 4hw6_A | 433 | Hypothetical protein, IPT/TIG domain protein; puta | 82.58 | |
| 3sov_A | 318 | LRP-6, low-density lipoprotein receptor-related pr | 81.24 | |
| 2xbg_A | 327 | YCF48-like protein; photosynthesis, photosystem II | 80.83 | |
| 1k3i_A | 656 | Galactose oxidase precursor; blade beta propeller, | 80.4 |
| >2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-40 Score=301.57 Aligned_cols=348 Identities=42% Similarity=0.607 Sum_probs=240.3
Q ss_pred ccchHHHHhhhhhhhhhhhhcCcchheeecccccccCceeeEecCCcccccCCCCccccccCcceeeeccccCCCCCcEE
Q psy4579 6 PFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQNHLL 85 (368)
Q Consensus 6 ~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (368)
.+++.+|++.++++||+||+|+|++|+++.++.++||++|++|.|+.... .++.+ ....+..||++...++.+.
T Consensus 11 ~~~~~~~~~~~~~~~~~wk~n~~~~y~~~~~~~l~wp~l~~~~~p~~~~~----~~~~~--~~~~~~~GT~t~~~~n~i~ 84 (430)
T 2xyi_A 11 SFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTKQ----DGKDY--SVHRLILGTHTSDEQNHLL 84 (430)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECSSCCSCEEECSCCEEC----TTCSC--EEEEEEEECCCSSSCEEEE
T ss_pred ccccchhhhhhhHHHhhHhhCChHHHHHHhhcCCCCCceEEEECcccccc----cCCCc--ceEEEEEEEcCCCCCCEEE
Confidence 34567788999999999999999999999999999999999999987532 22222 2345678999888788888
Q ss_pred EEEEecCCCccccccCCcccCCCCcccCCCC-Ceee-eeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCC
Q psy4579 86 IASVQLPNEDAQFDASNYDTDKGGNVQLPNE-DAQF-DASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPK 163 (368)
Q Consensus 86 i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~-~~~~-~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~ 163 (368)
+..+.+|..........|+. .++.+..+.. .+++ ......|.+.|++++|+|+++.+||+++.||.|++||+.+...
T Consensus 85 i~~~~lp~~~~~~~~~~~d~-~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~ 163 (430)
T 2xyi_A 85 IASVQLPSEDAQFDGSHYDN-EKGEFGGFGSVCGKIEIEIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPS 163 (430)
T ss_dssp EEEEEEC---------------------------CEEEEEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCS
T ss_pred EEEEECCCCccccccccccc-cccccccccCCCCceEEEEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCccc
Confidence 99888875543333333332 2344444432 2233 3556789999999999998448999999999999999986311
Q ss_pred CC---cccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEe
Q psy4579 164 EN---RVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIH 240 (368)
Q Consensus 164 ~~---~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~ 240 (368)
.. ....+...+.+|...+. +++|+|++..+|++|+.||.|++||++..........+...+.+|...|.+++|+
T Consensus 164 ~~~~~~~~~~~~~~~~h~~~v~---~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~ 240 (430)
T 2xyi_A 164 KPEPSGECQPDLRLRGHQKEGY---GLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWH 240 (430)
T ss_dssp SCCTTCCCCCSEEEECCSSCCC---CEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEEC
T ss_pred ccCccccCCCcEEecCCCCCeE---EEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEe
Confidence 10 01235678899999995 9999998444999999999999999988654333334456777899999999997
Q ss_pred e---ecccccCCCCccceEEEE--------------------eecCCcccccccccccCCCCCcccccCCCCceeeeeec
Q psy4579 241 R---LILGTHTSDEQNHLLIAS--------------------VQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKI 297 (368)
Q Consensus 241 ~---~~~~~~~~d~~~~~~~~~--------------------~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 297 (368)
+ .++++++.++.+++|... +.+.+....+.+.. ...+.+.+|+.+..........
T Consensus 241 p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg--~~dg~v~vwd~~~~~~~~~~~~ 318 (430)
T 2xyi_A 241 LLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATG--SADKTVALWDLRNLKLKLHSFE 318 (430)
T ss_dssp SSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEE--ETTSEEEEEETTCTTSCSEEEE
T ss_pred CCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEE--eCCCeEEEEeCCCCCCCeEEee
Confidence 6 577788888777777432 12222222111111 2335677888887443333333
Q ss_pred CcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCC----CCCCCCCceeeecccCceeeecceeee
Q psy4579 298 NHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPD----PNGECHPDLRLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 298 ~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~----~~~~~~~~~~~~gh~~~V~~l~w~p~~ 365 (368)
+|...|.+++|+|+++.+|++++.||.|++||++....... ..+....+..+.+|.+.|++++|+|+.
T Consensus 319 ~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~ 390 (430)
T 2xyi_A 319 SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNE 390 (430)
T ss_dssp CCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSS
T ss_pred cCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCC
Confidence 89999999999999988999999999999999986332110 001123445567899999999999974
|
| >4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-37 Score=272.14 Aligned_cols=280 Identities=16% Similarity=0.121 Sum_probs=194.9
Q ss_pred hhhhhhhhhhcCcchheeecccccccCceeeEecCCcccccCCCCccccccCcceeee-----ccccCC-----CCCcEE
Q psy4579 16 INEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDK-----GTHTSD-----EQNHLL 85 (368)
Q Consensus 16 ~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~-----~~~~~~ 85 (368)
.....+.|....... ..++-.+.+++|+|||++|++++ ++++++|+-.+.. ...... .+....
T Consensus 12 ~p~~~r~w~~~~~~~------~~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (344)
T 4gqb_B 12 VPPAAREWNLPPNAP------ACMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAG 84 (344)
T ss_dssp -----------CCSC------SSCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSC
T ss_pred CCccccccCCCCCCc------ccccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCC
Confidence 444556676543221 12344588999999999998776 6677777532211 001000 111224
Q ss_pred EEEEecCCCccccccCCcccCCCCcccCCCCCee-----eeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCC
Q psy4579 86 IASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQ-----FDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINA 160 (368)
Q Consensus 86 i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~-----~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~ 160 (368)
|.++.|.+++..+.+ +.||+|++||.+.. ......+|.+.|++++|+|++ ++|++|+.||+|++||+++
T Consensus 85 v~~~~~s~d~~l~~~-----s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg-~~l~sgs~d~~i~iwd~~~ 158 (344)
T 4gqb_B 85 VADLTWVGERGILVA-----SDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSG-TQAVSGSKDICIKVWDLAQ 158 (344)
T ss_dssp EEEEEEETTTEEEEE-----ETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTT
T ss_pred EEEEEEeCCCeEEEE-----ECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCC-CEEEEEeCCCeEEEEECCC
Confidence 778888665433322 35999999997642 223456899999999999999 9999999999999999988
Q ss_pred CCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeee--ecccccEeEEE
Q psy4579 161 TPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIF--TGHTAVVEDYS 238 (368)
Q Consensus 161 ~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~--~~~~~~v~~v~ 238 (368)
+. ++..+.+|.+.|. +++|+|++..+|++|+.|++|++||++++. +...+ ..+...+.+++
T Consensus 159 ~~-------~~~~~~~h~~~V~---~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~-------~~~~~~~~~~~~~~~~~~ 221 (344)
T 4gqb_B 159 QV-------VLSSYRAHAAQVT---CVAASPHKDSVFLSCSEDNRILLWDTRCPK-------PASQIGCSAPGYLPTSLA 221 (344)
T ss_dssp TE-------EEEEECCCSSCEE---EEEECSSCTTEEEEEETTSCEEEEETTSSS-------CEEECC----CCCEEEEE
T ss_pred Cc-------EEEEEcCcCCceE---EEEecCCCCCceeeeccccccccccccccc-------eeeeeecceeeccceeee
Confidence 64 5788999999996 999999856789999999999999999873 33333 33556788999
Q ss_pred Eee---ecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcE
Q psy4579 239 IHR---LILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCV 315 (368)
Q Consensus 239 ~~~---~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~ 315 (368)
|++ .++++++.|+.+ .+||..+++....+. +|...|++++|+|++..+
T Consensus 222 ~~p~~~~~l~sg~~dg~v----------------------------~~wd~~~~~~~~~~~-~h~~~v~~v~fsp~g~~~ 272 (344)
T 4gqb_B 222 WHPQQSEVFVFGDENGTV----------------------------SLVDTKSTSCVLSSA-VHSQCVTGLVFSPHSVPF 272 (344)
T ss_dssp ECSSCTTEEEEEETTSEE----------------------------EEEESCC--CCEEEE-CCSSCEEEEEECSSSSCC
T ss_pred ecCCCCcceEEeccCCcE----------------------------EEEECCCCcEEEEEc-CCCCCEEEEEEccCCCeE
Confidence 975 234444444433 344445566666665 899999999999998778
Q ss_pred EEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeecccCceeeecceeee
Q psy4579 316 IATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 316 lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p~~ 365 (368)
|||||.|++|+|||++. ..+..+.+|.+.|++++|+|..
T Consensus 273 lasgs~D~~i~vwd~~~-----------~~~~~~~~H~~~V~~v~~sp~~ 311 (344)
T 4gqb_B 273 LASLSEDCSLAVLDSSL-----------SELFRSQAHRDFVRDATWSPLN 311 (344)
T ss_dssp EEEEETTSCEEEECTTC-----------CEEEEECCCSSCEEEEEECSSS
T ss_pred EEEEeCCCeEEEEECCC-----------CcEEEEcCCCCCEEEEEEeCCC
Confidence 99999999999999974 2345678999999999999864
|
| >1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-35 Score=268.90 Aligned_cols=282 Identities=16% Similarity=0.170 Sum_probs=212.5
Q ss_pred cccCceeeEecCCcccccCCCCccccccCcceeeeccccCCCC-CcEEEEEEecCCCccccccCCcccCCCCcccCCCCC
Q psy4579 39 LEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQ-NHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNED 117 (368)
Q Consensus 39 ~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~ 117 (368)
+.-||.+++|+|++..+++|+.|+.+++|++.. +....... ....|.++.|.+.+..+.. + +.||+|++|+..
T Consensus 107 h~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~--~~~~~~l~~h~~~V~~v~~~~~~~~l~s-g---s~D~~i~iwd~~ 180 (410)
T 1vyh_C 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYET--GDFERTLKGHTDSVQDISFDHSGKLLAS-C---SADMTIKLWDFQ 180 (410)
T ss_dssp CSSCEEEEEECSSSSEEEEEESSSCEEEEETTT--CCCCEEECCCSSCEEEEEECTTSSEEEE-E---ETTSCCCEEETT
T ss_pred cCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC--CcEEEEEeccCCcEEEEEEcCCCCEEEE-E---eCCCeEEEEeCC
Confidence 456899999999999999999999997776543 33322211 2235778888655443332 2 369999999987
Q ss_pred e-eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCe
Q psy4579 118 A-QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGY 196 (368)
Q Consensus 118 ~-~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~ 196 (368)
+ +....+.+|...|.+++|+|++ ++|++|+.|++|++||++++. +...+.+|...+. ++.|+|+ +.+
T Consensus 181 ~~~~~~~~~~h~~~V~~v~~~p~~-~~l~s~s~D~~i~~wd~~~~~-------~~~~~~~h~~~v~---~~~~~~~-g~~ 248 (410)
T 1vyh_C 181 GFECIRTMHGHDHNVSSVSIMPNG-DHIVSASRDKTIKMWEVQTGY-------CVKTFTGHREWVR---MVRPNQD-GTL 248 (410)
T ss_dssp SSCEEECCCCCSSCEEEEEECSSS-SEEEEEETTSEEEEEETTTCC-------EEEEEECCSSCEE---EEEECTT-SSE
T ss_pred CCceeEEEcCCCCCEEEEEEeCCC-CEEEEEeCCCeEEEEECCCCc-------EEEEEeCCCccEE---EEEECCC-CCE
Confidence 5 5566778899999999999998 899999999999999998874 5678899999996 9999998 999
Q ss_pred EEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeeecc--cccCCCCccceEEEEeecCCcccccccccc
Q psy4579 197 LLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLIL--GTHTSDEQNHLLIASVQLPNEDAQFDASNY 274 (368)
Q Consensus 197 l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~--~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 274 (368)
|++|+.|++|++||++++ .+...+.+|...|.+++|+|... ......+..... ....+..+...
T Consensus 249 l~s~s~D~~v~vwd~~~~-------~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~g~~l~sg-- 314 (410)
T 1vyh_C 249 IASCSNDQTVRVWVVATK-------ECKAELREHRHVVECISWAPESSYSSISEATGSETKK-----SGKPGPFLLSG-- 314 (410)
T ss_dssp EEEEETTSCEEEEETTTC-------CEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC------------CCEEEEE--
T ss_pred EEEEcCCCeEEEEECCCC-------ceeeEecCCCceEEEEEEcCcccccchhhhccccccc-----cCCCCCEEEEE--
Confidence 999999999999999887 45677889999999999986311 000000000000 00000111111
Q ss_pred cCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeecccC
Q psy4579 275 DTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQK 354 (368)
Q Consensus 275 d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~ 354 (368)
...+.+.+|+..++.....+. +|...|.+++|+|++ .+|++|+.||+|++||++. ...+..+.+|..
T Consensus 315 -s~D~~i~iwd~~~~~~~~~~~-~h~~~v~~v~~~~~g-~~l~s~s~D~~i~vwd~~~----------~~~~~~~~~h~~ 381 (410)
T 1vyh_C 315 -SRDKTIKMWDVSTGMCLMTLV-GHDNWVRGVLFHSGG-KFILSCADDKTLRVWDYKN----------KRCMKTLNAHEH 381 (410)
T ss_dssp -ETTSEEEEEETTTTEEEEEEE-CCSSCEEEEEECSSS-SCEEEEETTTEEEEECCTT----------SCCCEEEECCSS
T ss_pred -eCCCeEEEEECCCCceEEEEE-CCCCcEEEEEEcCCC-CEEEEEeCCCeEEEEECCC----------CceEEEEcCCCC
Confidence 133457778888888777776 899999999999999 5777999999999999975 345567889999
Q ss_pred ceeeecceeee
Q psy4579 355 EGLIEGTYNCY 365 (368)
Q Consensus 355 ~V~~l~w~p~~ 365 (368)
.|++++|+|+.
T Consensus 382 ~v~~l~~~~~~ 392 (410)
T 1vyh_C 382 FVTSLDFHKTA 392 (410)
T ss_dssp CEEEEEECSSS
T ss_pred cEEEEEEcCCC
Confidence 99999999975
|
| >2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-35 Score=258.26 Aligned_cols=265 Identities=15% Similarity=0.132 Sum_probs=202.1
Q ss_pred cccCceeeEecCCcccccCCCCccccccCcceeeeccccCCC-CCcEEEEEEecCCCccccccCCcccCCCCcccCCCCC
Q psy4579 39 LEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDE-QNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNED 117 (368)
Q Consensus 39 ~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~ 117 (368)
+.-+|.+++|+|++++|++++.||.+++|+... +...... .....+..+.+.+....+..+ +.||.|++|+..
T Consensus 12 h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~s~----s~d~~i~vwd~~ 85 (304)
T 2ynn_A 12 RSDRVKGIDFHPTEPWVLTTLYSGRVELWNYET--QVEVRSIQVTETPVRAGKFIARKNWIIVG----SDDFRIRVFNYN 85 (304)
T ss_dssp ECSCEEEEEECSSSSEEEEEETTSEEEEEETTT--TEEEEEEECCSSCEEEEEEEGGGTEEEEE----ETTSEEEEEETT
T ss_pred CCCceEEEEECCCCCEEEEEcCCCcEEEEECCC--CceeEEeeccCCcEEEEEEeCCCCEEEEE----CCCCEEEEEECC
Confidence 456899999999999999999999997776543 3222221 112235666665444333322 358999999986
Q ss_pred e-eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCe
Q psy4579 118 A-QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGY 196 (368)
Q Consensus 118 ~-~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~ 196 (368)
. +....+.+|.+.|++++|+|++ .+|++|+.||+|++||++++.. ....+.+|...|. +++|+|.++.+
T Consensus 86 ~~~~~~~~~~h~~~v~~~~~~~~~-~~l~sgs~D~~v~lWd~~~~~~------~~~~~~~h~~~v~---~v~~~p~~~~~ 155 (304)
T 2ynn_A 86 TGEKVVDFEAHPDYIRSIAVHPTK-PYVLSGSDDLTVKLWNWENNWA------LEQTFEGHEHFVM---CVAFNPKDPST 155 (304)
T ss_dssp TCCEEEEEECCSSCEEEEEECSSS-SEEEEEETTSCEEEEEGGGTTE------EEEEECCCCSCEE---EEEECTTCTTE
T ss_pred CCcEEEEEeCCCCcEEEEEEcCCC-CEEEEECCCCeEEEEECCCCcc------hhhhhcccCCcEE---EEEECCCCCCE
Confidence 4 5666778899999999999998 8999999999999999987532 4567889999996 99999965889
Q ss_pred EEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee----ecccccCCCCccceEEEEeecCCcccccccc
Q psy4579 197 LLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR----LILGTHTSDEQNHLLIASVQLPNEDAQFDAS 272 (368)
Q Consensus 197 l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~----~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 272 (368)
|++|+.|++|++||+++... ......+|...+..++|.+ ..+.+++.|+.
T Consensus 156 l~sgs~D~~v~iwd~~~~~~------~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~-------------------- 209 (304)
T 2ynn_A 156 FASGCLDRTVKVWSLGQSTP------NFTLTTGQERGVNYVDYYPLPDKPYMITASDDLT-------------------- 209 (304)
T ss_dssp EEEEETTSEEEEEETTCSSC------SEEEECCCTTCEEEEEECCSTTCCEEEEEETTSE--------------------
T ss_pred EEEEeCCCeEEEEECCCCCc------cceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCe--------------------
Confidence 99999999999999987632 1223345667888888865 23444444433
Q ss_pred cccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeecc
Q psy4579 273 NYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGH 352 (368)
Q Consensus 273 ~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh 352 (368)
+.+|+..+++....+. +|...|.+++|+|++ .+|+||+.||+|++||++. ...+..+.+|
T Consensus 210 --------i~iWd~~~~~~~~~~~-~h~~~v~~~~~~p~~-~~l~s~s~Dg~i~iWd~~~----------~~~~~~~~~~ 269 (304)
T 2ynn_A 210 --------IKIWDYQTKSCVATLE-GHMSNVSFAVFHPTL-PIIISGSEDGTLKIWNSST----------YKVEKTLNVG 269 (304)
T ss_dssp --------EEEEETTTTEEEEEEE-CCSSCEEEEEECSSS-SEEEEEETTSCEEEEETTT----------CCEEEEECCS
T ss_pred --------EEEEeCCCCccceeeC-CCCCCEEEEEECCCC-CEEEEEcCCCeEEEEECCC----------CceeeeccCC
Confidence 4445555666666666 899999999999999 5888999999999999975 4455678899
Q ss_pred cCceeeecceeee
Q psy4579 353 QKEGLIEGTYNCY 365 (368)
Q Consensus 353 ~~~V~~l~w~p~~ 365 (368)
...+++++|+|..
T Consensus 270 ~~~~~~~~~~~~~ 282 (304)
T 2ynn_A 270 LERSWCIATHPTG 282 (304)
T ss_dssp SSSEEEEEECTTC
T ss_pred CccEEEEEECCCC
Confidence 9999999999864
|
| >4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-35 Score=264.31 Aligned_cols=264 Identities=14% Similarity=0.131 Sum_probs=191.2
Q ss_pred cccCceeeEecCCcccccCCCCcccccc-----CcceeeeccccCC-----CCCcEEEEEEecCCCccccccCCcccCCC
Q psy4579 39 LEWPSLTAQWLPDVTSVQLPNEDAQFDA-----SNYDTDKGTHTSD-----EQNHLLIASVQLPNEDAQFDASNYDTDKG 108 (368)
Q Consensus 39 ~~~~~~~~~~~p~~~~l~~~~~~~~~~~-----~~~~~~~~~~~~~-----~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 108 (368)
++-+|.+++|+|||++|++++.+.. ++ +.|+...+..... .+....|.++.|.+++..+.+ +.|
T Consensus 41 H~~~V~~v~fSpDG~~las~s~d~~-~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~l~~-----s~d 114 (357)
T 4g56_B 41 MEVQIGAVRYRRDGALLLAASSLSS-RTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGILVA-----SDS 114 (357)
T ss_dssp CCSEEEEEEECSSSCEEEEEECSSS-SSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEEEEE-----ETT
T ss_pred ccCCEEEEEECCCCCEEEEEcCCCC-ccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCEEEE-----ECC
Confidence 4567999999999999999988532 22 3344333322211 112234788888665544433 248
Q ss_pred CcccCCCCCeee-----eeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceec
Q psy4579 109 GNVQLPNEDAQF-----DASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEV 183 (368)
Q Consensus 109 g~i~i~~~~~~~-----~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~ 183 (368)
|+|++|+..... .....+|.+.|++++|+|++ ++|++|+.||+|++||++++. +...+.+|...|.
T Consensus 115 g~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg-~~l~sgs~dg~v~iwd~~~~~-------~~~~~~~h~~~v~- 185 (357)
T 4g56_B 115 GAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDG-TQAVSGGKDFSVKVWDLSQKA-------VLKSYNAHSSEVN- 185 (357)
T ss_dssp SCEEEC--------CCCCEEECCCSSCEEEEEECSSS-SEEEEEETTSCEEEEETTTTE-------EEEEECCCSSCEE-
T ss_pred CEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCC-CEEEEEeCCCeEEEEECCCCc-------EEEEEcCCCCCEE-
Confidence 999999986432 12345799999999999999 999999999999999998864 5678899999996
Q ss_pred ceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee---ecccccCCCCccceEEEEe
Q psy4579 184 RYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR---LILGTHTSDEQNHLLIASV 260 (368)
Q Consensus 184 ~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~---~~~~~~~~d~~~~~~~~~~ 260 (368)
+++|+|++..++++++.||+|++||++++.... ...+..|...+.+++|+| .++++++.++.
T Consensus 186 --~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~-----~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~-------- 250 (357)
T 4g56_B 186 --CVAACPGKDTIFLSCGEDGRILLWDTRKPKPAT-----RIDFCASDTIPTSVTWHPEKDDTFACGDETGN-------- 250 (357)
T ss_dssp --EEEECTTCSSCEEEEETTSCEEECCTTSSSCBC-----BCCCTTCCSCEEEEEECTTSTTEEEEEESSSC--------
T ss_pred --EEEEccCCCceeeeeccCCceEEEECCCCceee-----eeeeccccccccchhhhhcccceEEEeecccc--------
Confidence 999999855789999999999999998874311 122345677899999985 23444444433
Q ss_pred ecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCC
Q psy4579 261 QLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPN 340 (368)
Q Consensus 261 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~ 340 (368)
+.+|+..+++....+. +|...|++++|+|++..+||+|+.|++|+|||++.
T Consensus 251 --------------------i~~wd~~~~~~~~~~~-~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~-------- 301 (357)
T 4g56_B 251 --------------------VSLVNIKNPDSAQTSA-VHSQNITGLAYSYHSSPFLASISEDCTVAVLDADF-------- 301 (357)
T ss_dssp --------------------EEEEESSCGGGCEEEC-CCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTS--------
T ss_pred --------------------eeEEECCCCcEeEEEe-ccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCC--------
Confidence 3344444555555555 89999999999999878899999999999999974
Q ss_pred CCCCCceeeecccCceeeecceee
Q psy4579 341 GECHPDLRLRGHQKEGLIEGTYNC 364 (368)
Q Consensus 341 ~~~~~~~~~~gh~~~V~~l~w~p~ 364 (368)
.......+|.+.|++|+|+|.
T Consensus 302 ---~~~~~~~~H~~~V~~vafsP~ 322 (357)
T 4g56_B 302 ---SEVFRDLSHRDFVTGVAWSPL 322 (357)
T ss_dssp ---CEEEEECCCSSCEEEEEECSS
T ss_pred ---CcEeEECCCCCCEEEEEEeCC
Confidence 223455699999999999983
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-34 Score=253.93 Aligned_cols=266 Identities=14% Similarity=0.175 Sum_probs=204.9
Q ss_pred cccccCceeeEecCC----cccccCCCCccccccCcceeeeccccCC-CCCcEEEEEEecCCCccccccCCcccCCCCcc
Q psy4579 37 HALEWPSLTAQWLPD----VTSVQLPNEDAQFDASNYDTDKGTHTSD-EQNHLLIASVQLPNEDAQFDASNYDTDKGGNV 111 (368)
Q Consensus 37 ~~~~~~~~~~~~~p~----~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i 111 (368)
..+.-+|.+++|+|+ ++.|++|+.|+.+++|+++......... ......|.++.+.+....+. ++ +.||.|
T Consensus 29 ~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~-s~---s~D~~i 104 (321)
T 3ow8_A 29 QAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAA-SS---SLDAHI 104 (321)
T ss_dssp TSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEE-EE---ETTSEE
T ss_pred ccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEE-EE---eCCCcE
Confidence 346778999999985 6689999999999888765432222211 12223467777755443332 22 469999
Q ss_pred cCCCCCe-eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEe
Q psy4579 112 QLPNEDA-QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWN 190 (368)
Q Consensus 112 ~i~~~~~-~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~ 190 (368)
++|+... +....+..|...+.+++|+|++ ++|++|+.||.|++||++++. ....+..|...+. +++|+
T Consensus 105 ~lWd~~~~~~~~~~~~~~~~~~~~~~spdg-~~l~~g~~dg~v~i~~~~~~~-------~~~~~~~~~~~v~---~~~~s 173 (321)
T 3ow8_A 105 RLWDLENGKQIKSIDAGPVDAWTLAFSPDS-QYLATGTHVGKVNIFGVESGK-------KEYSLDTRGKFIL---SIAYS 173 (321)
T ss_dssp EEEETTTTEEEEEEECCTTCCCCEEECTTS-SEEEEECTTSEEEEEETTTCS-------EEEEEECSSSCEE---EEEEC
T ss_pred EEEECCCCCEEEEEeCCCccEEEEEECCCC-CEEEEEcCCCcEEEEEcCCCc-------eeEEecCCCceEE---EEEEC
Confidence 9999864 5556667788999999999999 999999999999999998764 4566778888885 99999
Q ss_pred CCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee--ecccccCCCCccceEEEEeecCCcccc
Q psy4579 191 PSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LILGTHTSDEQNHLLIASVQLPNEDAQ 268 (368)
Q Consensus 191 p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~ 268 (368)
|+ +.+|++|+.||.|++||++++ .++..+.+|...|.+++|+| ..+++++.|+.+++
T Consensus 174 pd-g~~lasg~~dg~i~iwd~~~~-------~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~i------------- 232 (321)
T 3ow8_A 174 PD-GKYLASGAIDGIINIFDIATG-------KLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKI------------- 232 (321)
T ss_dssp TT-SSEEEEEETTSCEEEEETTTT-------EEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEE-------------
T ss_pred CC-CCEEEEEcCCCeEEEEECCCC-------cEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEE-------------
Confidence 99 999999999999999999887 45678889999999999986 34555555544444
Q ss_pred cccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCcee
Q psy4579 269 FDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLR 348 (368)
Q Consensus 269 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~ 348 (368)
|+...+.....+. +|...|.+++|+|++ .+|++|+.|++|++||++. ...+..
T Consensus 233 ---------------wd~~~~~~~~~~~-~h~~~v~~~~~sp~~-~~l~s~s~D~~v~iwd~~~----------~~~~~~ 285 (321)
T 3ow8_A 233 ---------------YDVQHANLAGTLS-GHASWVLNVAFCPDD-THFVSSSSDKSVKVWDVGT----------RTCVHT 285 (321)
T ss_dssp ---------------EETTTCCEEEEEC-CCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTT----------TEEEEE
T ss_pred ---------------EECCCcceeEEEc-CCCCceEEEEECCCC-CEEEEEeCCCcEEEEeCCC----------CEEEEE
Confidence 3334455555554 899999999999999 6788999999999999975 445667
Q ss_pred eecccCceeeecceeee
Q psy4579 349 LRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 349 ~~gh~~~V~~l~w~p~~ 365 (368)
+.+|.+.|++++|+|+.
T Consensus 286 ~~~h~~~v~~v~~s~~g 302 (321)
T 3ow8_A 286 FFDHQDQVWGVKYNGNG 302 (321)
T ss_dssp ECCCSSCEEEEEECTTS
T ss_pred EcCCCCcEEEEEECCCC
Confidence 88999999999999874
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-33 Score=271.30 Aligned_cols=314 Identities=12% Similarity=0.098 Sum_probs=227.6
Q ss_pred hhhhhhhhcCcchheeecccccccCceeeEecCCcccccCCCCccccccCcceeeeccccCC-CCCcEEEEEEecCCCcc
Q psy4579 18 EEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSD-EQNHLLIASVQLPNEDA 96 (368)
Q Consensus 18 ~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~ 96 (368)
+..++|+...+.....+..| ..++.+++|+|||++||+|+.|+.+++|+........... ......|.++.|.+++.
T Consensus 39 ~~v~l~~~~~~~~~~~~~~h--~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~ 116 (611)
T 1nr0_A 39 TSVYTVPVGSLTDTEIYTEH--SHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESK 116 (611)
T ss_dssp TEEEEEETTCSSCCEEECCC--SSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSC
T ss_pred CEEEEecCCCcccCeEecCC--CCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCC
Confidence 46678888777666655443 4579999999999999999999999777643211111111 11123478888877766
Q ss_pred ccccCCcccCCCCcccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeec
Q psy4579 97 QFDASNYDTDKGGNVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTG 176 (368)
Q Consensus 97 ~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~ 176 (368)
.+.+.+.+....+.|++|+. +.....+.+|.+.|++++|+|+++..|++|+.|++|++||..+.+ ....+.+
T Consensus 117 ~l~~~~~~~~~~~~v~~wd~-~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~-------~~~~l~~ 188 (611)
T 1nr0_A 117 RIAAVGEGRERFGHVFLFDT-GTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFK-------FKSTFGE 188 (611)
T ss_dssp EEEEEECCSSCSEEEEETTT-CCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBE-------EEEEECC
T ss_pred EEEEEECCCCceeEEEEeeC-CCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCe-------Eeeeecc
Confidence 66555433334578999995 345566789999999999999984479999999999999987653 4578899
Q ss_pred cccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeee-------cccccEeEEEEee--eccccc
Q psy4579 177 HTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFT-------GHTAVVEDYSIHR--LILGTH 247 (368)
Q Consensus 177 h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~-------~~~~~v~~v~~~~--~~~~~~ 247 (368)
|...|. +++|+|+ +.+|++|+.|++|++||+.++. +...+. +|...|.+++|+| ..++++
T Consensus 189 H~~~V~---~v~fspd-g~~las~s~D~~i~lwd~~~g~-------~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~ 257 (611)
T 1nr0_A 189 HTKFVH---SVRYNPD-GSLFASTGGDGTIVLYNGVDGT-------KTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASA 257 (611)
T ss_dssp CSSCEE---EEEECTT-SSEEEEEETTSCEEEEETTTCC-------EEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEE
T ss_pred ccCceE---EEEECCC-CCEEEEEECCCcEEEEECCCCc-------EeeeeccccccccccCCCEEEEEECCCCCEEEEE
Confidence 999996 9999999 9999999999999999998763 334442 7999999999986 567888
Q ss_pred CCCCccceEEEEe-------ecCCcc-ccccccccc-------CCCCCcccccCCCCceeeeeecCcccceeEEEEeCCC
Q psy4579 248 TSDEQNHLLIASV-------QLPNED-AQFDASNYD-------TDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQN 312 (368)
Q Consensus 248 ~~d~~~~~~~~~~-------~~~~~~-~~~~~~~~d-------~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~ 312 (368)
+.|+.+++|.... ...... .......++ ...+.+.+|+...++....+. +|...|++++|+|++
T Consensus 258 s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~-gh~~~v~~l~~spdg 336 (611)
T 1nr0_A 258 SADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRY-GHNKAITALSSSADG 336 (611)
T ss_dssp ETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEEC-CCSSCEEEEEECTTS
T ss_pred eCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEc-CCCCCEEEEEEeCCC
Confidence 8898888885321 000000 000000011 123556777777776554444 899999999999999
Q ss_pred CcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceee-ecccCceeeecceee
Q psy4579 313 PCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRL-RGHQKEGLIEGTYNC 364 (368)
Q Consensus 313 ~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~-~gh~~~V~~l~w~p~ 364 (368)
.+|++|+.|++|++||+... .....+ .+|...|.+++|+|.
T Consensus 337 -~~l~s~s~D~~v~~Wd~~~~----------~~~~~~~~~h~~~v~~~~~s~~ 378 (611)
T 1nr0_A 337 -KTLFSADAEGHINSWDISTG----------ISNRVFPDVHATMITGIKTTSK 378 (611)
T ss_dssp -SEEEEEETTSCEEEEETTTC----------CEEECSSCSCSSCEEEEEECTT
T ss_pred -CEEEEEeCCCcEEEEECCCC----------ceeeecccCCcceEEEEEECCC
Confidence 68889999999999999751 211222 579999999999864
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-33 Score=249.28 Aligned_cols=262 Identities=16% Similarity=0.157 Sum_probs=200.8
Q ss_pred cccCceeeEecCCcccccCCCCccccccCcceeeeccccCC-CCCcEEEEEEecCCCccccccCCcccCCCCcccCCCCC
Q psy4579 39 LEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSD-EQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNED 117 (368)
Q Consensus 39 ~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~ 117 (368)
+.-++.+++|+||+++|++++.||.+++|+.. .+..... ......+.++.+.+.+..+.+. +.||.+++|+..
T Consensus 54 H~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~--~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~----~~d~~v~iw~~~ 127 (340)
T 1got_B 54 HLAKIYAMHWGTDSRLLLSASQDGKLIIWDSY--TTNKVHAIPLRSSWVMTCAYAPSGNYVACG----GLDNICSIYNLK 127 (340)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTTEEEEEETT--TCCEEEEEECSSSCEEEEEECTTSSEEEEE----ETTCEEEEEETT
T ss_pred CCCceEEEEECCCCCEEEEEeCCCcEEEEECC--CCCcceEeecCCccEEEEEECCCCCEEEEE----eCCCeEEEEECc
Confidence 45689999999999999999999999777543 2222211 1112346677776555443333 358999999975
Q ss_pred e-----eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCC
Q psy4579 118 A-----QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPS 192 (368)
Q Consensus 118 ~-----~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~ 192 (368)
. .....+.+|.+.|.++.|++++ .+++++.|++|++||++++. +...+.+|.+.|. +++|+|+
T Consensus 128 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~--~l~s~s~d~~i~~wd~~~~~-------~~~~~~~h~~~v~---~~~~~~~ 195 (340)
T 1got_B 128 TREGNVRVSRELAGHTGYLSCCRFLDDN--QIVTSSGDTTCALWDIETGQ-------QTTTFTGHTGDVM---SLSLAPD 195 (340)
T ss_dssp TCSBSCEEEEEEECCSSCEEEEEEEETT--EEEEEETTSCEEEEETTTTE-------EEEEECCCSSCEE---EEEECTT
T ss_pred cCCCcceeEEEecCCCccEEEEEECCCC--cEEEEECCCcEEEEECCCCc-------EEEEEcCCCCceE---EEEECCC
Confidence 4 3445677899999999999885 59999999999999998764 5678899999996 9999998
Q ss_pred CCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee--ecccccCCCCccceEEEEeecCCcccccc
Q psy4579 193 LNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LILGTHTSDEQNHLLIASVQLPNEDAQFD 270 (368)
Q Consensus 193 ~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 270 (368)
+.+|++|+.||+|++||++++ .+...+.+|...|++++|+| ..+++++.|+.+++|
T Consensus 196 -~~~l~sg~~d~~v~~wd~~~~-------~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iw-------------- 253 (340)
T 1got_B 196 -TRLFVSGACDASAKLWDVREG-------MCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLF-------------- 253 (340)
T ss_dssp -SSEEEEEETTSCEEEEETTTC-------SEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEE--------------
T ss_pred -CCEEEEEeCCCcEEEEECCCC-------eeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEE--------------
Confidence 899999999999999999887 45678889999999999986 345555555444443
Q ss_pred cccccCCCCCcccccCCCCceeeeee-cCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceee
Q psy4579 271 ASNYDTDKGDFGGFGSVSGKIEIEIK-INHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRL 349 (368)
Q Consensus 271 ~~~~d~~~~~~~~~~~~~~~~~~~~~-~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 349 (368)
+..+++....+. ..+...|.+++|+|++ .+|++|+.||.|++||+.. ...+..+
T Consensus 254 --------------d~~~~~~~~~~~~~~~~~~v~~~~~s~~g-~~l~~g~~d~~i~vwd~~~----------~~~~~~~ 308 (340)
T 1got_B 254 --------------DLRADQELMTYSHDNIICGITSVSFSKSG-RLLLAGYDDFNCNVWDALK----------ADRAGVL 308 (340)
T ss_dssp --------------ETTTTEEEEEECCTTCCSCEEEEEECTTS-SEEEEEETTSEEEEEETTT----------CCEEEEE
T ss_pred --------------ECCCCcEEEEEccCCcccceEEEEECCCC-CEEEEECCCCeEEEEEccc----------CcEeeEe
Confidence 333444333332 1234579999999999 6888999999999999975 3455678
Q ss_pred ecccCceeeecceeee
Q psy4579 350 RGHQKEGLIEGTYNCY 365 (368)
Q Consensus 350 ~gh~~~V~~l~w~p~~ 365 (368)
.+|.+.|.+++|+|+.
T Consensus 309 ~~h~~~v~~~~~s~dg 324 (340)
T 1got_B 309 AGHDNRVSCLGVTDDG 324 (340)
T ss_dssp ECCSSCEEEEEECTTS
T ss_pred ecCCCcEEEEEEcCCC
Confidence 8999999999999974
|
| >4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-33 Score=249.81 Aligned_cols=240 Identities=15% Similarity=0.189 Sum_probs=180.7
Q ss_pred cccCceeeEecCCcccccCCCCccccccCcceeeeccccCC-----CCCcEEEEEEecCCCccccccCCcccCCCCcccC
Q psy4579 39 LEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSD-----EQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQL 113 (368)
Q Consensus 39 ~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i 113 (368)
.+-++.+++|+|++ .+++|+.||.|++|+.+ .+..... ......|.++.|.+.+..+... +.||+|++
T Consensus 81 ~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~--~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sg----s~d~~i~i 153 (344)
T 4gqb_B 81 TEAGVADLTWVGER-GILVASDSGAVELWELD--ENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSG----SKDICIKV 153 (344)
T ss_dssp ESSCEEEEEEETTT-EEEEEETTSEEEEEEEC--TTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEE----ETTSCEEE
T ss_pred cCCCEEEEEEeCCC-eEEEEECCCEEEEEecc--CCCceeEeeccccCCCCCEEEEEECCCCCEEEEE----eCCCeEEE
Confidence 45679999999996 46789999999776543 3322111 1122357888886655444332 36899999
Q ss_pred CCCCe-eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceee--eccccceecceeeEEe
Q psy4579 114 PNEDA-QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIF--TGHTAVVEVRYGLSWN 190 (368)
Q Consensus 114 ~~~~~-~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~--~~h~~~v~~~~~i~~~ 190 (368)
|+... +....+.+|.+.|++++|+|++..+|++|+.||+|++||+++++ +...+ ..|...+. +++|+
T Consensus 154 wd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~-------~~~~~~~~~~~~~~~---~~~~~ 223 (344)
T 4gqb_B 154 WDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPK-------PASQIGCSAPGYLPT---SLAWH 223 (344)
T ss_dssp EETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSS-------CEEECC----CCCEE---EEEEC
T ss_pred EECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccc-------eeeeeecceeeccce---eeeec
Confidence 99864 56677888999999999999986789999999999999998875 23333 33445564 99999
Q ss_pred CCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee---ecccccCCCCccceEEEEeecCCccc
Q psy4579 191 PSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR---LILGTHTSDEQNHLLIASVQLPNEDA 267 (368)
Q Consensus 191 p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~---~~~~~~~~d~~~~~~~~~~~~~~~~~ 267 (368)
|+++.+|++|+.||+|++||++++ .++..+.+|...|++++|+| .++++++.|+.+++|
T Consensus 224 p~~~~~l~sg~~dg~v~~wd~~~~-------~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vw----------- 285 (344)
T 4gqb_B 224 PQQSEVFVFGDENGTVSLVDTKST-------SCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVL----------- 285 (344)
T ss_dssp SSCTTEEEEEETTSEEEEEESCC---------CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEE-----------
T ss_pred CCCCcceEEeccCCcEEEEECCCC-------cEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEE-----------
Confidence 986889999999999999999987 45778999999999999986 345555555554443
Q ss_pred ccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCC
Q psy4579 268 QFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 268 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
|..++++ ..+ .+|.+.|++++|+|+++.+|+|||.||+|++|++..
T Consensus 286 -----------------d~~~~~~-~~~-~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~ 331 (344)
T 4gqb_B 286 -----------------DSSLSEL-FRS-QAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPT 331 (344)
T ss_dssp -----------------CTTCCEE-EEE-CCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC
T ss_pred -----------------ECCCCcE-EEE-cCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCC
Confidence 3334443 333 389999999999999988999999999999999975
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-33 Score=247.26 Aligned_cols=291 Identities=15% Similarity=0.178 Sum_probs=207.2
Q ss_pred CceeeEecCCcccccCCCCccccccCcceeeecc--ccCCCCCcEEEEEEecCCCccccccCCcccCCCCcccCCCCCe-
Q psy4579 42 PSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGT--HTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDA- 118 (368)
Q Consensus 42 ~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~- 118 (368)
++.+++|+|++++|++|+.|+.+++|+....... ..........|.++.|.+.+..+..+ +.||.+++|+.+.
T Consensus 18 ~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~----s~D~~v~iw~~~~~ 93 (345)
T 3fm0_A 18 RCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASA----SFDATTCIWKKNQD 93 (345)
T ss_dssp CEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEE----ETTSCEEEEEECCC
T ss_pred cEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEE----ECCCcEEEEEccCC
Confidence 7889999999999999999999977755432111 11112223457888886655444333 3589999998754
Q ss_pred --eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCe
Q psy4579 119 --QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGY 196 (368)
Q Consensus 119 --~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~ 196 (368)
.....+.+|...|.+++|+|++ ++|++|+.|++|++||+..... ......+.+|...|. +++|+|+ +.+
T Consensus 94 ~~~~~~~~~~h~~~v~~v~~sp~~-~~l~s~s~D~~v~iwd~~~~~~----~~~~~~~~~h~~~v~---~~~~~p~-~~~ 164 (345)
T 3fm0_A 94 DFECVTTLEGHENEVKSVAWAPSG-NLLATCSRDKSVWVWEVDEEDE----YECVSVLNSHTQDVK---HVVWHPS-QEL 164 (345)
T ss_dssp -EEEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEEECTTSC----EEEEEEECCCCSCEE---EEEECSS-SSC
T ss_pred CeEEEEEccCCCCCceEEEEeCCC-CEEEEEECCCeEEEEECCCCCC----eEEEEEecCcCCCeE---EEEECCC-CCE
Confidence 3456678899999999999998 9999999999999999986532 123567889999996 9999999 899
Q ss_pred EEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee--ecccccCCCCccceEEEEeecCCcccccccccc
Q psy4579 197 LLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LILGTHTSDEQNHLLIASVQLPNEDAQFDASNY 274 (368)
Q Consensus 197 l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 274 (368)
|++|+.|++|++||++.+. ..+...+.+|...|++++|+| ..+++++.|+.+++|.... +...........
T Consensus 165 l~s~s~d~~i~~w~~~~~~-----~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~--~~~~~~~~~~~~ 237 (345)
T 3fm0_A 165 LASASYDDTVKLYREEEDD-----WVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYL--PGNEQGVACSGS 237 (345)
T ss_dssp EEEEETTSCEEEEEEETTE-----EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEEC--TTCTTCCCCC--
T ss_pred EEEEeCCCcEEEEEecCCC-----EEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEecccc--CCCCccceeecc
Confidence 9999999999999987652 123567889999999999986 5778888888888886432 111111100000
Q ss_pred cCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeecccC
Q psy4579 275 DTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQK 354 (368)
Q Consensus 275 d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~ 354 (368)
.........+...|...|.+++|+|++ ..|++++.|+.|++|+.........+.. ......+.+|.+
T Consensus 238 -----------~~~~~~~~~~~~~h~~~v~~v~~~~~~-~~l~s~~~d~~i~vw~~~~~~~~~~~~~-~~~~~~~~~h~~ 304 (345)
T 3fm0_A 238 -----------DPSWKCICTLSGFHSRTIYDIAWCQLT-GALATACGDDAIRVFQEDPNSDPQQPTF-SLTAHLHQAHSQ 304 (345)
T ss_dssp ------------CEEEEEEEECSSCSSCEEEEEECTTT-CCEEEEETTSCEEEEEECTTSCTTSCCE-EEEEEETTSSSS
T ss_pred -----------CCccceeEEecCCCCCcEEEEEEecCC-CEEEEEeCCCeEEEEEeCCCCCcceeeE-EEEeeecccccC
Confidence 001122333333489999999999999 5788999999999999875321110000 000112358999
Q ss_pred ceeeecceeee
Q psy4579 355 EGLIEGTYNCY 365 (368)
Q Consensus 355 ~V~~l~w~p~~ 365 (368)
.|++++|+|..
T Consensus 305 ~V~~v~~~p~~ 315 (345)
T 3fm0_A 305 DVNCVAWNPKE 315 (345)
T ss_dssp CEEEEEECSSS
T ss_pred cEeEeEEeCCC
Confidence 99999999964
|
| >2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-32 Score=245.63 Aligned_cols=265 Identities=15% Similarity=0.097 Sum_probs=199.9
Q ss_pred cccCceeeEecCCcccccCCCCccccccCcceeeeccccCCCCCcEEEEEEecCCCccccccCCcccCCCCcccCCCCCe
Q psy4579 39 LEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDA 118 (368)
Q Consensus 39 ~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~ 118 (368)
+.-+|.+++|+|++++|++|+.|+.+++|+.......+..... ...+..+.+.+.+..+.+. +.|+.+++|+...
T Consensus 63 H~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~-~~~v~~~~~sp~g~~lasg----~~d~~i~v~~~~~ 137 (354)
T 2pbi_B 63 HGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMP-CTWVMACAYAPSGCAIACG----GLDNKCSVYPLTF 137 (354)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECS-SSCCCEEEECTTSSEEEEE----STTSEEEEEECCC
T ss_pred CCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecC-CCCEEEEEECCCCCEEEEe----eCCCCEEEEEEec
Confidence 5668999999999999999999999977754322211111111 1235566675555444433 3589999997642
Q ss_pred -------eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeC
Q psy4579 119 -------QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNP 191 (368)
Q Consensus 119 -------~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p 191 (368)
.....+..|...|.+++|+|++ ..|++|+.||+|++||++++. +...+.+|...|. +++|+|
T Consensus 138 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~t~s~D~~v~lwd~~~~~-------~~~~~~~h~~~v~---~~~~~~ 206 (354)
T 2pbi_B 138 DKNENMAAKKKSVAMHTNYLSACSFTNSD-MQILTASGDGTCALWDVESGQ-------LLQSFHGHGADVL---CLDLAP 206 (354)
T ss_dssp CTTCCSGGGCEEEEECSSCEEEEEECSSS-SEEEEEETTSEEEEEETTTCC-------EEEEEECCSSCEE---EEEECC
T ss_pred cccccccccceeeeccCCcEEEEEEeCCC-CEEEEEeCCCcEEEEeCCCCe-------EEEEEcCCCCCeE---EEEEEe
Confidence 2234456799999999999998 899999999999999998874 5688999999995 999988
Q ss_pred C-CCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee--ecccccCCCCccceEEEEeecCCcccc
Q psy4579 192 S-LNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LILGTHTSDEQNHLLIASVQLPNEDAQ 268 (368)
Q Consensus 192 ~-~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~ 268 (368)
. ++++|++|+.||+|++||++++ .++..+.+|...|++++|+| ..+++++.|+.+++|
T Consensus 207 ~~~g~~l~sgs~Dg~v~~wd~~~~-------~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lw------------ 267 (354)
T 2pbi_B 207 SETGNTFVSGGCDKKAMVWDMRSG-------QCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLY------------ 267 (354)
T ss_dssp CSSCCEEEEEETTSCEEEEETTTC-------CEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEE------------
T ss_pred CCCCCEEEEEeCCCeEEEEECCCC-------cEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEE------------
Confidence 5 2579999999999999999987 45678889999999999986 355565555555554
Q ss_pred cccccccCCCCCcccccCCCCceeeeee-cCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCce
Q psy4579 269 FDASNYDTDKGDFGGFGSVSGKIEIEIK-INHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDL 347 (368)
Q Consensus 269 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~-~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~ 347 (368)
++..++....+. ..+...+.+++|+|++ .+|++|+.|++|++||+.. ..++.
T Consensus 268 ----------------d~~~~~~~~~~~~~~~~~~~~~~~~s~~g-~~l~~g~~d~~i~vwd~~~----------~~~~~ 320 (354)
T 2pbi_B 268 ----------------DLRADREVAIYSKESIIFGASSVDFSLSG-RLLFAGYNDYTINVWDVLK----------GSRVS 320 (354)
T ss_dssp ----------------ETTTTEEEEEECCTTCCSCEEEEEECTTS-SEEEEEETTSCEEEEETTT----------CSEEE
T ss_pred ----------------ECCCCcEEEEEcCCCcccceeEEEEeCCC-CEEEEEECCCcEEEEECCC----------CceEE
Confidence 232333322222 1234578999999999 6888999999999999965 34556
Q ss_pred eeecccCceeeecceeee
Q psy4579 348 RLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 348 ~~~gh~~~V~~l~w~p~~ 365 (368)
.+.+|.+.|.+++|+|+.
T Consensus 321 ~l~~h~~~v~~l~~spdg 338 (354)
T 2pbi_B 321 ILFGHENRVSTLRVSPDG 338 (354)
T ss_dssp EECCCSSCEEEEEECTTS
T ss_pred EEECCCCcEEEEEECCCC
Confidence 788999999999999974
|
| >3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-32 Score=248.10 Aligned_cols=267 Identities=19% Similarity=0.219 Sum_probs=195.4
Q ss_pred cccCceeeEecCCcccccCCCCccccccCcceeeeccccCCCCCcEEEEEEecCCCccccccCCcccCCCCcccCCCCCe
Q psy4579 39 LEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDA 118 (368)
Q Consensus 39 ~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~ 118 (368)
+.-+|.+++|+|++++|++|+.|+.+++|+.......+..... ...|.++.+.+.+..+.+. +.|+.+++|+...
T Consensus 65 H~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h-~~~v~~~~~s~~g~~las~----~~d~~v~iw~~~~ 139 (380)
T 3iz6_a 65 HSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLH-CPWVMECAFAPNGQSVACG----GLDSACSIFNLSS 139 (380)
T ss_dssp CSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECC-CTTCCCCEECTTSSEEEEC----CSSSCCEEEECCC
T ss_pred cccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecC-CCCEEEEEECCCCCEEEEe----eCCCcEEEEECCC
Confidence 4568999999999999999999999977764332211111111 1124455665554444333 3589999998753
Q ss_pred e--------eeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceee-----eccccceecce
Q psy4579 119 Q--------FDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIF-----TGHTAVVEVRY 185 (368)
Q Consensus 119 ~--------~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~-----~~h~~~v~~~~ 185 (368)
. ....+.+|.+.|.++.|+|+++..|++|+.|++|++||+.++. ....+ .+|...+.
T Consensus 140 ~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~-------~~~~~~~~~~~~h~~~v~--- 209 (380)
T 3iz6_a 140 QADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQ-------RISIFGSEFPSGHTADVL--- 209 (380)
T ss_dssp CSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCC-------EEEEECCCSSSSCCSCEE---
T ss_pred CccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCc-------EEEEeecccCCCCccCeE---
Confidence 2 2345678999999999999875789999999999999998874 23333 67888885
Q ss_pred eeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee--ecccccCCCCccceEEEEeecC
Q psy4579 186 GLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LILGTHTSDEQNHLLIASVQLP 263 (368)
Q Consensus 186 ~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~d~~~~~~~~~~~~~ 263 (368)
+++|+|.++++|++|+.||+|++||++... .++..+.+|...|++++|+| ..+++++.|+.+++|.
T Consensus 210 ~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~------~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd------ 277 (380)
T 3iz6_a 210 SLSINSLNANMFISGSCDTTVRLWDLRITS------RAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFD------ 277 (380)
T ss_dssp EEEECSSSCCEEEEEETTSCEEEEETTTTC------CCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEE------
T ss_pred EEEeecCCCCEEEEEECCCeEEEEECCCCC------cceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEE------
Confidence 999988558999999999999999998543 34677889999999999986 4566666666666653
Q ss_pred CcccccccccccCCCCCcccccCCCCceeeeeec------CcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCC
Q psy4579 264 NEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKI------NHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKP 337 (368)
Q Consensus 264 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~------~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~ 337 (368)
+.++.....+.. .+...|.+++|+|++ .+|++|+.||.|++||+..
T Consensus 278 ----------------------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g-~~l~~g~~dg~i~vwd~~~----- 329 (380)
T 3iz6_a 278 ----------------------MRTGHQLQVYNREPDRNDNELPIVTSVAFSISG-RLLFAGYSNGDCYVWDTLL----- 329 (380)
T ss_dssp ----------------------TTTTEEEEEECCCCSSSCCSSCSCSEEEECSSS-SEEEEECTTSCEEEEETTT-----
T ss_pred ----------------------CCCCcEEEEecccccccccccCceEEEEECCCC-CEEEEEECCCCEEEEECCC-----
Confidence 223333222211 233458999999999 6888999999999999864
Q ss_pred CCCCCCCCceee----ecccCceeeecceeee
Q psy4579 338 DPNGECHPDLRL----RGHQKEGLIEGTYNCY 365 (368)
Q Consensus 338 ~~~~~~~~~~~~----~gh~~~V~~l~w~p~~ 365 (368)
......+ .+|.+.|.+++|+|+.
T Consensus 330 -----~~~~~~~~~~~~~h~~~v~~l~~s~dg 356 (380)
T 3iz6_a 330 -----AEMVLNLGTLQNSHEGRISCLGLSSDG 356 (380)
T ss_dssp -----CCEEEEECCSCSSCCCCCCEEEECSSS
T ss_pred -----CceEEEEecccCCCCCceEEEEECCCC
Confidence 2222233 5899999999999975
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-32 Score=259.24 Aligned_cols=322 Identities=16% Similarity=0.195 Sum_probs=215.7
Q ss_pred hhhhhhhhhhcCcc--hheeecccccccCceeeEecCCcccccCCCCcc--ccccCcceeeeccccCCCC-CcEEEEEEe
Q psy4579 16 INEEYKIWKKNTPF--LYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDA--QFDASNYDTDKGTHTSDEQ-NHLLIASVQ 90 (368)
Q Consensus 16 ~~~~~~~w~~~~~~--~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~i~~~~ 90 (368)
.+...++|+..... +...+ ..+.-++.+++|+||+++|++++.+. ...++.|+. +....... ....|.++.
T Consensus 79 ~d~~v~lWd~~~~~~~~~~~~--~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~--~~~~~~l~gh~~~v~~v~ 154 (611)
T 1nr0_A 79 VHGNVRIWDTTQTTHILKTTI--PVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDT--GTSNGNLTGQARAMNSVD 154 (611)
T ss_dssp TTSEEEEEESSSTTCCEEEEE--ECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTT--CCBCBCCCCCSSCEEEEE
T ss_pred CCCCEEEeECCCCcceeeEee--cccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeC--CCCcceecCCCCCceEEE
Confidence 35678899875332 22122 23456899999999999999876653 122344443 32222222 223588888
Q ss_pred cCCCccccccCCcccCCCCcccCCCCCe-eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccc
Q psy4579 91 LPNEDAQFDASNYDTDKGGNVQLPNEDA-QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVID 169 (368)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~g~i~i~~~~~-~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~ 169 (368)
|.+......+++ +.|++|++|+... +....+.+|.+.|++++|+|++ .+||+|+.|++|++||+.++.
T Consensus 155 f~p~~~~~l~s~---s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg-~~las~s~D~~i~lwd~~~g~------- 223 (611)
T 1nr0_A 155 FKPSRPFRIISG---SDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDG-SLFASTGGDGTIVLYNGVDGT------- 223 (611)
T ss_dssp ECSSSSCEEEEE---ETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCC-------
T ss_pred ECCCCCeEEEEE---eCCCeEEEEECCCCeEeeeeccccCceEEEEECCCC-CEEEEEECCCcEEEEECCCCc-------
Confidence 866554323332 4699999999764 5566778899999999999999 999999999999999998764
Q ss_pred cceeee-------ccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCcc----------------------
Q psy4579 170 AKTIFT-------GHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRV---------------------- 220 (368)
Q Consensus 170 ~~~~~~-------~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~---------------------- 220 (368)
....+. +|.+.|. +++|+|+ +.+|++|+.|++|++||++++.....+
T Consensus 224 ~~~~~~~~~~~~~~h~~~V~---~v~~spd-g~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s 299 (611)
T 1nr0_A 224 KTGVFEDDSLKNVAHSGSVF---GLTWSPD-GTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVS 299 (611)
T ss_dssp EEEECBCTTSSSCSSSSCEE---EEEECTT-SSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEE
T ss_pred EeeeeccccccccccCCCEE---EEEECCC-CCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEE
Confidence 233442 7999995 9999998 999999999999999999875321100
Q ss_pred --------------ccceeeeecccccEeEEEEee--ecccccCCCCccceEEEEe------------------ecCCcc
Q psy4579 221 --------------IDAKTIFTGHTAVVEDYSIHR--LILGTHTSDEQNHLLIASV------------------QLPNED 266 (368)
Q Consensus 221 --------------~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~d~~~~~~~~~~------------------~~~~~~ 266 (368)
..+...+.+|...|.+++|+| ..+.+++.|+.+++|.... .+.+..
T Consensus 300 ~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~ 379 (611)
T 1nr0_A 300 ISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKG 379 (611)
T ss_dssp EETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTS
T ss_pred EeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCC
Confidence 012345568999999999986 4677777777777774210 000000
Q ss_pred ccccc----------------------------------------------------------------------cccc-
Q psy4579 267 AQFDA----------------------------------------------------------------------SNYD- 275 (368)
Q Consensus 267 ~~~~~----------------------------------------------------------------------~~~d- 275 (368)
.+.. ..+.
T Consensus 380 -~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~sp 458 (611)
T 1nr0_A 380 -DLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSN 458 (611)
T ss_dssp -CEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECT
T ss_pred -cEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeC
Confidence 0000 0000
Q ss_pred --------CCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCce
Q psy4579 276 --------TDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDL 347 (368)
Q Consensus 276 --------~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~ 347 (368)
...+.+.+|+...+........+|...|++++|+|++ .+|++++.|++|++||+.... +.....
T Consensus 459 dg~~lasgs~D~~v~lwd~~~~~~~~~~~~~h~~~v~~v~fspdg-~~las~s~d~~v~~w~~~~~~-------~~~~~~ 530 (611)
T 1nr0_A 459 DKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNG-AFLVATDQSRKVIPYSVANNF-------ELAHTN 530 (611)
T ss_dssp TSCEEEEEETTSEEEEEEEETTEEEEEEEEECSSCEEEEEECTTS-SEEEEEETTSCEEEEEGGGTT-------EESCCC
T ss_pred CCCEEEEeCCCCeEEEEEccCCceeeeeccCCCCceEEEEECCCC-CEEEEEcCCCCEEEEEcCCCC-------ceeeee
Confidence 0123345565555443211124799999999999999 688899999999999997411 111111
Q ss_pred eeecccCceeeecceeee
Q psy4579 348 RLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 348 ~~~gh~~~V~~l~w~p~~ 365 (368)
.+.+|...|++++|+|+.
T Consensus 531 ~~~~H~~~V~~v~fspdg 548 (611)
T 1nr0_A 531 SWTFHTAKVACVSWSPDN 548 (611)
T ss_dssp CCCCCSSCEEEEEECTTS
T ss_pred eeeecccceeEEEECCCC
Confidence 234599999999999974
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-32 Score=242.35 Aligned_cols=261 Identities=15% Similarity=0.227 Sum_probs=196.8
Q ss_pred hhhhhhhhhhcCcchheeecccccccCceeeEecCCcccccCCCCccccccCcceeeeccccCC-CCCcEEEEEEecCCC
Q psy4579 16 INEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSD-EQNHLLIASVQLPNE 94 (368)
Q Consensus 16 ~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~ 94 (368)
.+...|+|+.+.+.+.-......+.-++.+++|+|++..+++++.|+.+++|+.. .+..... ......+..+.+.+.
T Consensus 56 ~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~--~~~~~~~~~~~~~~~~~~~~spd 133 (321)
T 3ow8_A 56 LDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLE--NGKQIKSIDAGPVDAWTLAFSPD 133 (321)
T ss_dssp TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETT--TTEEEEEEECCTTCCCCEEECTT
T ss_pred CCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECC--CCCEEEEEeCCCccEEEEEECCC
Confidence 4677899987765432222223355689999999999999999999999777543 3322211 111112334556554
Q ss_pred ccccccCCcccCCCCcccCCCCCe-eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCccccccee
Q psy4579 95 DAQFDASNYDTDKGGNVQLPNEDA-QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTI 173 (368)
Q Consensus 95 ~~~~~~~~~~~~~~g~i~i~~~~~-~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~ 173 (368)
...+.+. +.+|.|++|+... +....+..|...|.+++|+|++ ++||+|+.||.|++||+++++ ....
T Consensus 134 g~~l~~g----~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg-~~lasg~~dg~i~iwd~~~~~-------~~~~ 201 (321)
T 3ow8_A 134 SQYLATG----THVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDG-KYLASGAIDGIINIFDIATGK-------LLHT 201 (321)
T ss_dssp SSEEEEE----CTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTTE-------EEEE
T ss_pred CCEEEEE----cCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCC-CEEEEEcCCCeEEEEECCCCc-------EEEE
Confidence 4433332 3589999999864 4455667788999999999999 999999999999999998764 5678
Q ss_pred eeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee--ecccccCCCC
Q psy4579 174 FTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LILGTHTSDE 251 (368)
Q Consensus 174 ~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~d~ 251 (368)
+.+|..+|. +++|+|+ +.+|++|+.||+|++||+++. .....+.+|...|.+++|+| ..+.+++.|+
T Consensus 202 ~~~h~~~v~---~l~~spd-~~~l~s~s~dg~i~iwd~~~~-------~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~ 270 (321)
T 3ow8_A 202 LEGHAMPIR---SLTFSPD-SQLLVTASDDGYIKIYDVQHA-------NLAGTLSGHASWVLNVAFCPDDTHFVSSSSDK 270 (321)
T ss_dssp ECCCSSCCC---EEEECTT-SCEEEEECTTSCEEEEETTTC-------CEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EcccCCcee---EEEEcCC-CCEEEEEcCCCeEEEEECCCc-------ceeEEEcCCCCceEEEEECCCCCEEEEEeCCC
Confidence 899999996 9999998 999999999999999999876 45677889999999999986 2344444444
Q ss_pred ccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECC
Q psy4579 252 QNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYT 331 (368)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~ 331 (368)
. +.+|+..+++....+. +|...|.+++|+|++ .+|++++.||+|++||..
T Consensus 271 ~----------------------------v~iwd~~~~~~~~~~~-~h~~~v~~v~~s~~g-~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 271 S----------------------------VKVWDVGTRTCVHTFF-DHQDQVWGVKYNGNG-SKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp C----------------------------EEEEETTTTEEEEEEC-CCSSCEEEEEECTTS-SEEEEEETTCCEEEEECC
T ss_pred c----------------------------EEEEeCCCCEEEEEEc-CCCCcEEEEEECCCC-CEEEEEeCCCeEEEEeCC
Confidence 3 4444555566666665 899999999999999 678899999999999973
|
| >2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-31 Score=255.22 Aligned_cols=302 Identities=19% Similarity=0.289 Sum_probs=227.4
Q ss_pred hhhhhhhhhcCcchheeecccccccCceeeEecCCcccccCCCCccccccCcceeeeccccCCCCCcEEEEEEecCCCcc
Q psy4579 17 NEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNEDA 96 (368)
Q Consensus 17 ~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 96 (368)
+...++|+.+...+. .+. ...-++.+++|+|+++.+++++.++.+++|+.....-...... ...|..+.+.+...
T Consensus 242 d~~i~~w~~~~~~~~-~~~--~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~~~~~~~~~~h--~~~v~~~~~~~~~~ 316 (577)
T 2ymu_A 242 DKTVKLWNRNGQLLQ-TLT--GHSSSVNGVAFRPDGQTIASASDDKTVKLWNRNGQLLQTLTGH--SSSVWGVAFSPDGQ 316 (577)
T ss_dssp TSCEEEECTTSCEEE-EEC--CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCC--SSCEEEEEECTTSS
T ss_pred CCEEEEEeCCCCEEE-EEe--cCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCCCcEEEEEecC--CCCeEEEEECCCCC
Confidence 445678887654332 222 2356789999999999999999999997776432211111111 23466677755544
Q ss_pred ccccCCcccCCCCcccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeec
Q psy4579 97 QFDASNYDTDKGGNVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTG 176 (368)
Q Consensus 97 ~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~ 176 (368)
.+... +.||.|++|+.++.....+..|...|.+++|+|++ ..|++|+.||.|++||.... ....+.+
T Consensus 317 ~l~t~----~~d~~i~~w~~~~~~~~~~~~~~~~v~~~~~s~~g-~~l~~~~~dg~v~~~~~~~~--------~~~~~~~ 383 (577)
T 2ymu_A 317 TIASA----SDDKTVKLWNRNGQHLQTLTGHSSSVWGVAFSPDG-QTIASASDDKTVKLWNRNGQ--------LLQTLTG 383 (577)
T ss_dssp EEEEE----ETTSCEEEEETTSCEEEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTCC--------EEEEEEC
T ss_pred EEEEE----eCCCeEEEEeCCCCeeEEEeCCCCCEEEEEECCCC-CEEEEEeCCCEEEEEcCCCC--------EEEEecC
Confidence 43322 35899999999988888888999999999999999 99999999999999996543 5678889
Q ss_pred cccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee--ecccccCCCCccc
Q psy4579 177 HTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LILGTHTSDEQNH 254 (368)
Q Consensus 177 h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~d~~~~ 254 (368)
|...|+ +++|+|+ +.+|++++.|+.|++||... ..+..+.+|...|.+++|+| ..+++++.|+.++
T Consensus 384 ~~~~v~---~~~~s~d-g~~l~~~~~d~~v~~~~~~~--------~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~ 451 (577)
T 2ymu_A 384 HSSSVR---GVAFSPD-GQTIASASDDKTVKLWNRNG--------QLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVK 451 (577)
T ss_dssp CSSCEE---EEEECTT-SSCEEEEETTSEEEEECTTC--------CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred CCCCeE---EEEECCC-CCEEEEEeCCCEEEEEeCCC--------CEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEE
Confidence 999996 9999999 89999999999999999643 34677889999999999986 4677777888777
Q ss_pred eEE----------------EEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEE
Q psy4579 255 LLI----------------ASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIAT 318 (368)
Q Consensus 255 ~~~----------------~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~las 318 (368)
+|. ..+.+.++...+.... ..+.+.+|+. +++....+. +|...|++++|+|++ .+||+
T Consensus 452 ~w~~~~~~~~~~~~~~~~v~~~~~spd~~~las~~---~d~~i~iw~~-~~~~~~~~~-~h~~~v~~l~~s~dg-~~l~s 525 (577)
T 2ymu_A 452 LWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASAS---DDKTVKLWNR-NGQLLQTLT-GHSSSVRGVAFSPDG-QTIAS 525 (577)
T ss_dssp EEETTSCEEEEEECCSSCEEEEEECTTSCEEEEEE---TTSEEEEEET-TSCEEEEEE-CCSSCEEEEEECTTS-SCEEE
T ss_pred EEECCCCEEEEEcCCCCCEEEEEEcCCCCEEEEEe---CCCEEEEEcC-CCCEEEEEe-CCCCCEEEEEEcCCC-CEEEE
Confidence 773 1223333333222221 2345677774 566666665 899999999999999 67889
Q ss_pred ecCCCeEEEEECCCCCCCCCCCCCCCCceeeecccCceeeecceeee
Q psy4579 319 KTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 319 gs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p~~ 365 (368)
|+.||+|++||+. ...+..+.+|.+.|++++|+|+.
T Consensus 526 ~~~dg~v~lwd~~-----------~~~~~~~~~h~~~v~~~~fs~dg 561 (577)
T 2ymu_A 526 ASDDKTVKLWNRN-----------GQLLQTLTGHSSSVWGVAFSPDG 561 (577)
T ss_dssp EETTSEEEEECTT-----------SCEEEEEECCSSCEEEEEECTTS
T ss_pred EECcCEEEEEeCC-----------CCEEEEEcCCCCCEEEEEEcCCC
Confidence 9999999999964 34566789999999999999974
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-32 Score=242.99 Aligned_cols=283 Identities=18% Similarity=0.240 Sum_probs=201.1
Q ss_pred hhhhhhhhhhcCcch-heeecccccccCceeeEecCCcccccCCCCccccccCcceeeeccccCC-CCCcEEEEEEecCC
Q psy4579 16 INEEYKIWKKNTPFL-YDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSD-EQNHLLIASVQLPN 93 (368)
Q Consensus 16 ~~~~~~~w~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~ 93 (368)
.+...++|+...... ........+.-++.+++|+|++++|++|+.|+.+.+|+........... ......|.++.|.+
T Consensus 36 ~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp 115 (345)
T 3fm0_A 36 GDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAP 115 (345)
T ss_dssp TTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECT
T ss_pred CCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeC
Confidence 356788898776532 2222334456789999999999999999999999777654332222222 11223577888866
Q ss_pred CccccccCCcccCCCCcccCCCCCe----eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccc
Q psy4579 94 EDAQFDASNYDTDKGGNVQLPNEDA----QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVID 169 (368)
Q Consensus 94 ~~~~~~~~~~~~~~~g~i~i~~~~~----~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~ 169 (368)
.+..+... +.||.|++|+... .....+..|...|.+++|+|++ .+|++|+.|++|++||++.... .
T Consensus 116 ~~~~l~s~----s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~-~~l~s~s~d~~i~~w~~~~~~~-----~ 185 (345)
T 3fm0_A 116 SGNLLATC----SRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQ-ELLASASYDDTVKLYREEEDDW-----V 185 (345)
T ss_dssp TSSEEEEE----ETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSS-SCEEEEETTSCEEEEEEETTEE-----E
T ss_pred CCCEEEEE----ECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCC-CEEEEEeCCCcEEEEEecCCCE-----E
Confidence 55443332 3689999999753 3345667899999999999998 8999999999999999976531 1
Q ss_pred cceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCc--------cccceeeeec-ccccEeEEEEe
Q psy4579 170 AKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENR--------VIDAKTIFTG-HTAVVEDYSIH 240 (368)
Q Consensus 170 ~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~--------~~~~~~~~~~-~~~~v~~v~~~ 240 (368)
+...+.+|...|. +++|+|+ +.+|++|+.|++|++||......... .+.++..+.+ |...|.+++|+
T Consensus 186 ~~~~~~~h~~~v~---~l~~sp~-g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~ 261 (345)
T 3fm0_A 186 CCATLEGHESTVW---SLAFDPS-GQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWC 261 (345)
T ss_dssp EEEEECCCSSCEE---EEEECTT-SSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEEC
T ss_pred EEEEecCCCCceE---EEEECCC-CCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEe
Confidence 3467889999996 9999998 99999999999999999754322111 1123344444 88899999998
Q ss_pred e--ecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEE
Q psy4579 241 R--LILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIAT 318 (368)
Q Consensus 241 ~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~las 318 (368)
+ ..+++++.|+.+++|.......... ...........+|...|++++|+|+++.+|||
T Consensus 262 ~~~~~l~s~~~d~~i~vw~~~~~~~~~~--------------------~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS 321 (345)
T 3fm0_A 262 QLTGALATACGDDAIRVFQEDPNSDPQQ--------------------PTFSLTAHLHQAHSQDVNCVAWNPKEPGLLAS 321 (345)
T ss_dssp TTTCCEEEEETTSCEEEEEECTTSCTTS--------------------CCEEEEEEETTSSSSCEEEEEECSSSTTEEEE
T ss_pred cCCCEEEEEeCCCeEEEEEeCCCCCcce--------------------eeEEEEeeecccccCcEeEeEEeCCCceEEEE
Confidence 6 4667777777777765431100000 00111222334899999999999998779999
Q ss_pred ecCCCeEEEEECCC
Q psy4579 319 KTPSSDVLVFDYTK 332 (368)
Q Consensus 319 gs~Dg~i~iwd~~~ 332 (368)
||.||+|++|+++.
T Consensus 322 ~s~Dg~v~~W~~~~ 335 (345)
T 3fm0_A 322 CSDDGEVAFWKYQR 335 (345)
T ss_dssp EETTSCEEEEEECC
T ss_pred cCCCCcEEEEEecC
Confidence 99999999999975
|
| >2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-31 Score=237.84 Aligned_cols=277 Identities=17% Similarity=0.203 Sum_probs=195.0
Q ss_pred cccCceeeEecCCcccccCCCCccccccCcceeeeccc--cCCCC-CcEEEEEEecCCCccccccCCcccCCCCcccCCC
Q psy4579 39 LEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTH--TSDEQ-NHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPN 115 (368)
Q Consensus 39 ~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~ 115 (368)
+.-+|.+++|+|+ +|++|+.|+.+++|+........ ..... ....|.++.|.+....+..+ +.||+|++|+
T Consensus 13 h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~----s~D~~v~iw~ 86 (330)
T 2hes_X 13 YKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAG----SFDSTVSIWA 86 (330)
T ss_dssp CSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEE----ETTSCEEEEE
T ss_pred CCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEE----eCCCcEEEEE
Confidence 4568999999998 89999999999777654321111 11111 23357888886655433332 3589999998
Q ss_pred CCe--------eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceee
Q psy4579 116 EDA--------QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGL 187 (368)
Q Consensus 116 ~~~--------~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i 187 (368)
... +....+.+|.+.|++++|+|++ ++||+|+.|++|++||+...... .++...+.+|...|. ++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g-~~las~s~D~~v~iwd~~~~~~~---~~~~~~~~~h~~~v~---~v 159 (330)
T 2hes_X 87 KEESADRTFEMDLLAIIEGHENEVKGVAWSNDG-YYLATCSRDKSVWIWETDESGEE---YECISVLQEHSQDVK---HV 159 (330)
T ss_dssp C-------CCCEEEEEEC----CEEEEEECTTS-CEEEEEETTSCEEEEECCTTCCC---CEEEEEECCCSSCEE---EE
T ss_pred cccCcCccccceeEEEEcCCCCcEEEEEECCCC-CEEEEEeCCCEEEEEeccCCCCC---eEEEEEeccCCCceE---EE
Confidence 742 3445677899999999999998 99999999999999999543211 124567889999996 99
Q ss_pred EEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeee----cccccCCCCccceEEEEeecC
Q psy4579 188 SWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRL----ILGTHTSDEQNHLLIASVQLP 263 (368)
Q Consensus 188 ~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~----~~~~~~~d~~~~~~~~~~~~~ 263 (368)
+|+|+ +.+|++|+.|++|++||++++. ..++..+.+|...|.+++|++. .+++++.|+.+++|.......
T Consensus 160 ~~~p~-~~~l~s~s~D~~i~iW~~~~~~-----~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~ 233 (330)
T 2hes_X 160 IWHPS-EALLASSSYDDTVRIWKDYDDD-----WECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDE 233 (330)
T ss_dssp EECSS-SSEEEEEETTSCEEEEEEETTE-----EEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECT
T ss_pred EECCC-CCEEEEEcCCCeEEEEECCCCC-----eeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCc
Confidence 99998 8999999999999999987642 1356778899999999999874 577888888888886653211
Q ss_pred CcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCC
Q psy4579 264 NEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGEC 343 (368)
Q Consensus 264 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~ 343 (368)
..... ......+...|...|.+++|+|++ +|++|+.||+|++||... +..
T Consensus 234 ~~~~~--------------------~~~~~~~~~~h~~~v~~v~~s~~~--~l~s~~~dg~v~iw~~~~--------~~~ 283 (330)
T 2hes_X 234 DDQQE--------------------WVCEAILPDVHKRQVYNVAWGFNG--LIASVGADGVLAVYEEVD--------GEW 283 (330)
T ss_dssp TSCEE--------------------EEEEEECCSCCSSCEEEEEECTTS--CEEEEETTSCEEEEEEET--------TEE
T ss_pred cccce--------------------eEEeeecccccccceEEEEEcCCC--EEEEEeCCCEEEEEEcCC--------Cce
Confidence 00000 011122222489999999999765 677999999999999863 111
Q ss_pred CCce-eeecccC-ceeeecceee
Q psy4579 344 HPDL-RLRGHQK-EGLIEGTYNC 364 (368)
Q Consensus 344 ~~~~-~~~gh~~-~V~~l~w~p~ 364 (368)
.... .+.+|.. .|++++|+|.
T Consensus 284 ~~~~~~~~~h~~~~v~~v~~~~~ 306 (330)
T 2hes_X 284 KVFAKRALCHGVYEINVVKWLEL 306 (330)
T ss_dssp EEEEEESCTTTTSCEEEEEEC--
T ss_pred EEEeccccccccceEEEEEEecC
Confidence 1121 2357887 8999999983
|
| >1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=99.98 E-value=9.3e-32 Score=245.52 Aligned_cols=259 Identities=16% Similarity=0.202 Sum_probs=199.8
Q ss_pred hhhhhhhhhcCcchheeecccccccCceeeEecCCcccccCCCCccccccCcceeeeccccCCCC-CcEEEEEEecCCCc
Q psy4579 17 NEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQ-NHLLIASVQLPNED 95 (368)
Q Consensus 17 ~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~ 95 (368)
+...++|+..+..+...+..| .-++.+++|+|++++|++|+.|+.+++|+.. .+....... ....|.++.+.+.+
T Consensus 129 Dg~i~vwd~~~~~~~~~l~~h--~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~--~~~~~~~~~~h~~~V~~v~~~p~~ 204 (410)
T 1vyh_C 129 DATIKVWDYETGDFERTLKGH--TDSVQDISFDHSGKLLASCSADMTIKLWDFQ--GFECIRTMHGHDHNVSSVSIMPNG 204 (410)
T ss_dssp SSCEEEEETTTCCCCEEECCC--SSCEEEEEECTTSSEEEEEETTSCCCEEETT--SSCEEECCCCCSSCEEEEEECSSS
T ss_pred CCeEEEEECCCCcEEEEEecc--CCcEEEEEEcCCCCEEEEEeCCCeEEEEeCC--CCceeEEEcCCCCCEEEEEEeCCC
Confidence 456788988877666555443 4579999999999999999999999776543 333322222 22347788886554
Q ss_pred cccccCCcccCCCCcccCCCCCe-eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceee
Q psy4579 96 AQFDASNYDTDKGGNVQLPNEDA-QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIF 174 (368)
Q Consensus 96 ~~~~~~~~~~~~~g~i~i~~~~~-~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~ 174 (368)
..+..+ +.||.|++|+... .....+.+|...|.++.|+|++ .+|++|+.||+|++||+.++. ....+
T Consensus 205 ~~l~s~----s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g-~~l~s~s~D~~v~vwd~~~~~-------~~~~~ 272 (410)
T 1vyh_C 205 DHIVSA----SRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDG-TLIASCSNDQTVRVWVVATKE-------CKAEL 272 (410)
T ss_dssp SEEEEE----ETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCC-------EEEEE
T ss_pred CEEEEE----eCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCC-CEEEEEcCCCeEEEEECCCCc-------eeeEe
Confidence 443332 3689999999864 5566778899999999999998 999999999999999998764 45778
Q ss_pred eccccceecceeeEEeCCC-------------------CCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEe
Q psy4579 175 TGHTAVVEVRYGLSWNPSL-------------------NGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVE 235 (368)
Q Consensus 175 ~~h~~~v~~~~~i~~~p~~-------------------~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~ 235 (368)
.+|...|. +++|+|+. +.+|++|+.|++|++||++++ .++..+.+|...|.
T Consensus 273 ~~h~~~v~---~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~-------~~~~~~~~h~~~v~ 342 (410)
T 1vyh_C 273 REHRHVVE---CISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTG-------MCLMTLVGHDNWVR 342 (410)
T ss_dssp CCCSSCEE---EEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTT-------EEEEEEECCSSCEE
T ss_pred cCCCceEE---EEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCC-------ceEEEEECCCCcEE
Confidence 89999996 99999962 468999999999999999987 46778889999999
Q ss_pred EEEEee--ecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCC
Q psy4579 236 DYSIHR--LILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNP 313 (368)
Q Consensus 236 ~v~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~ 313 (368)
+++|++ ..+.+++.|+.+++ |+..+++....+. +|...|++++|+|++
T Consensus 343 ~v~~~~~g~~l~s~s~D~~i~v----------------------------wd~~~~~~~~~~~-~h~~~v~~l~~~~~~- 392 (410)
T 1vyh_C 343 GVLFHSGGKFILSCADDKTLRV----------------------------WDYKNKRCMKTLN-AHEHFVTSLDFHKTA- 392 (410)
T ss_dssp EEEECSSSSCEEEEETTTEEEE----------------------------ECCTTSCCCEEEE-CCSSCEEEEEECSSS-
T ss_pred EEEEcCCCCEEEEEeCCCeEEE----------------------------EECCCCceEEEEc-CCCCcEEEEEEcCCC-
Confidence 999986 34445555544444 3344455555555 899999999999999
Q ss_pred cEEEEecCCCeEEEEECC
Q psy4579 314 CVIATKTPSSDVLVFDYT 331 (368)
Q Consensus 314 ~~lasgs~Dg~i~iwd~~ 331 (368)
.+|+|||.||+|++|+++
T Consensus 393 ~~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 393 PYVVTGSVDQTVKVWECR 410 (410)
T ss_dssp SCEEEEETTSEEEEEC--
T ss_pred CEEEEEeCCCcEEEEeCC
Confidence 578899999999999974
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=99.98 E-value=3.3e-31 Score=240.55 Aligned_cols=279 Identities=17% Similarity=0.190 Sum_probs=196.8
Q ss_pred cccCceeeEecCCcccccCCCCccccccCcceeeeccccCC---C----------------CCcEEEEEEecCCCccccc
Q psy4579 39 LEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSD---E----------------QNHLLIASVQLPNEDAQFD 99 (368)
Q Consensus 39 ~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~---~----------------~~~~~i~~~~~~~~~~~~~ 99 (368)
+..++.+++|+|||++|++|+ ++.+.+|. ...|..... . .....|.++.|.+.+..+.
T Consensus 63 h~~~V~~v~fspdg~~la~g~-~~~v~i~~--~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~ 139 (393)
T 1erj_A 63 HTSVVCCVKFSNDGEYLATGC-NKTTQVYR--VSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLA 139 (393)
T ss_dssp CSSCCCEEEECTTSSEEEEEC-BSCEEEEE--TTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEE
T ss_pred CCCEEEEEEECCCCCEEEEEc-CCcEEEEE--ecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEE
Confidence 566899999999999999987 56665554 333322111 0 1122477888866554443
Q ss_pred cCCcccCCCCcccCCCCCe-eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccc
Q psy4579 100 ASNYDTDKGGNVQLPNEDA-QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHT 178 (368)
Q Consensus 100 ~~~~~~~~~g~i~i~~~~~-~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~ 178 (368)
.+ +.||.|++|+... +....+.+|...|++++|+|++ .+|++|+.|++|++||++++. ....+. +.
T Consensus 140 s~----~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~-~~l~s~s~d~~v~iwd~~~~~-------~~~~~~-~~ 206 (393)
T 1erj_A 140 TG----AEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSG-DKLVSGSGDRTVRIWDLRTGQ-------CSLTLS-IE 206 (393)
T ss_dssp EE----ETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTTE-------EEEEEE-CS
T ss_pred EE----cCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCC-CEEEEecCCCcEEEEECCCCe-------eEEEEE-cC
Confidence 32 3589999999875 5566778899999999999999 899999999999999998764 234444 45
Q ss_pred cceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee--ecccccCCCCccceE
Q psy4579 179 AVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LILGTHTSDEQNHLL 256 (368)
Q Consensus 179 ~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~d~~~~~~ 256 (368)
..+. +++|+|.++.+|++|+.||.|++||++++.....+........+|...|.+++|++ ..+.+++.|+.+++|
T Consensus 207 ~~v~---~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~w 283 (393)
T 1erj_A 207 DGVT---TVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLW 283 (393)
T ss_dssp SCEE---EEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred CCcE---EEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEE
Confidence 5564 99999954899999999999999999886321111011112257999999999986 466777778777777
Q ss_pred EEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCC
Q psy4579 257 IASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSK 336 (368)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~ 336 (368)
......... . ......+.....+. +|...|.+++|+|++ .+|++|+.|++|++||++.
T Consensus 284 d~~~~~~~~----~------------~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~-~~l~sgs~D~~v~iwd~~~---- 341 (393)
T 1erj_A 284 NLQNANNKS----D------------SKTPNSGTCEVTYI-GHKDFVLSVATTQND-EYILSGSKDRGVLFWDKKS---- 341 (393)
T ss_dssp EC-------------------------------CEEEEEE-CCSSCEEEEEECGGG-CEEEEEETTSEEEEEETTT----
T ss_pred ECCCCCCcc----c------------ccCCCCCcceEEEe-cccCcEEEEEECCCC-CEEEEEeCCCeEEEEECCC----
Confidence 543210000 0 00001123334444 899999999999999 6788999999999999975
Q ss_pred CCCCCCCCCceeeecccCceeeecceee
Q psy4579 337 PDPNGECHPDLRLRGHQKEGLIEGTYNC 364 (368)
Q Consensus 337 ~~~~~~~~~~~~~~gh~~~V~~l~w~p~ 364 (368)
..++..+.+|.+.|.+++|+|.
T Consensus 342 ------~~~~~~l~~h~~~v~~v~~~~~ 363 (393)
T 1erj_A 342 ------GNPLLMLQGHRNSVISVAVANG 363 (393)
T ss_dssp ------CCEEEEEECCSSCEEEEEECSS
T ss_pred ------CeEEEEECCCCCCEEEEEecCC
Confidence 4556788999999999999873
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* | Back alignment and structure |
|---|
Probab=99.98 E-value=8.6e-32 Score=239.63 Aligned_cols=258 Identities=16% Similarity=0.204 Sum_probs=190.0
Q ss_pred hhhhhhhhhhcCcchheeecccccccCceeeEecCCcccccCCCCccccccCcceeeeccc--cCC-CCCcEEEEEEecC
Q psy4579 16 INEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTH--TSD-EQNHLLIASVQLP 92 (368)
Q Consensus 16 ~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~i~~~~~~ 92 (368)
.+...++|+..+......+.. ...++.+++|+|++++|++|+.|+.+.+|+.....+.. ... ......+.++.+.
T Consensus 75 ~Dg~v~iWd~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 152 (340)
T 1got_B 75 QDGKLIIWDSYTTNKVHAIPL--RSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFL 152 (340)
T ss_dssp TTTEEEEEETTTCCEEEEEEC--SSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEE
T ss_pred CCCcEEEEECCCCCcceEeec--CCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEEC
Confidence 355678888776655544433 34578999999999999999999999777654321110 001 1112235566665
Q ss_pred CCccccccCCcccCCCCcccCCCCCe-eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccc
Q psy4579 93 NEDAQFDASNYDTDKGGNVQLPNEDA-QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAK 171 (368)
Q Consensus 93 ~~~~~~~~~~~~~~~~g~i~i~~~~~-~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~ 171 (368)
+.+. +.+ .+.||.|++|+... +....+.+|.+.|.+++|+|++ .+|++|+.||+|++||++++. +.
T Consensus 153 ~~~~-l~s----~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~sg~~d~~v~~wd~~~~~-------~~ 219 (340)
T 1got_B 153 DDNQ-IVT----SSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDT-RLFVSGACDASAKLWDVREGM-------CR 219 (340)
T ss_dssp ETTE-EEE----EETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCS-------EE
T ss_pred CCCc-EEE----EECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCC-CEEEEEeCCCcEEEEECCCCe-------eE
Confidence 4443 222 23599999999864 5566777899999999999998 899999999999999998764 56
Q ss_pred eeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeee--cccccEeEEEEee--eccccc
Q psy4579 172 TIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFT--GHTAVVEDYSIHR--LILGTH 247 (368)
Q Consensus 172 ~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~--~~~~~v~~v~~~~--~~~~~~ 247 (368)
..+.+|...|. +++|+|+ +.+|++|+.||+|++||++... .+..+. .+...|.+++|+| ..+.++
T Consensus 220 ~~~~~h~~~v~---~v~~~p~-~~~l~s~s~d~~v~iwd~~~~~-------~~~~~~~~~~~~~v~~~~~s~~g~~l~~g 288 (340)
T 1got_B 220 QTFTGHESDIN---AICFFPN-GNAFATGSDDATCRLFDLRADQ-------ELMTYSHDNIICGITSVSFSKSGRLLLAG 288 (340)
T ss_dssp EEECCCSSCEE---EEEECTT-SSEEEEEETTSCEEEEETTTTE-------EEEEECCTTCCSCEEEEEECTTSSEEEEE
T ss_pred EEEcCCcCCEE---EEEEcCC-CCEEEEEcCCCcEEEEECCCCc-------EEEEEccCCcccceEEEEECCCCCEEEEE
Confidence 78899999996 9999998 9999999999999999998762 233333 2335789999986 344444
Q ss_pred CCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEE
Q psy4579 248 TSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLV 327 (368)
Q Consensus 248 ~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~i 327 (368)
+.|+.++ +|+..++.....+. +|.+.|.+++|+|++ .+|||||.||+|+|
T Consensus 289 ~~d~~i~----------------------------vwd~~~~~~~~~~~-~h~~~v~~~~~s~dg-~~l~s~s~D~~i~i 338 (340)
T 1got_B 289 YDDFNCN----------------------------VWDALKADRAGVLA-GHDNRVSCLGVTDDG-MAVATGSWDSFLKI 338 (340)
T ss_dssp ETTSEEE----------------------------EEETTTCCEEEEEE-CCSSCEEEEEECTTS-SCEEEEETTSCEEE
T ss_pred CCCCeEE----------------------------EEEcccCcEeeEee-cCCCcEEEEEEcCCC-CEEEEEcCCccEEe
Confidence 4444333 34444455555555 899999999999999 68889999999999
Q ss_pred EE
Q psy4579 328 FD 329 (368)
Q Consensus 328 wd 329 (368)
||
T Consensus 339 Wd 340 (340)
T 1got_B 339 WN 340 (340)
T ss_dssp EC
T ss_pred cC
Confidence 97
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-30 Score=228.92 Aligned_cols=265 Identities=13% Similarity=0.154 Sum_probs=196.3
Q ss_pred ccccCceeeEecCCcccccCCCCccccccCcceeeeccccCC-CCCcEEEEEEecCCCccccccCCcccCCCCcccCCCC
Q psy4579 38 ALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSD-EQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNE 116 (368)
Q Consensus 38 ~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~ 116 (368)
.+.-++.+++|+|++++|++++.|+.+++|+.. .+..... ......|.++.+.+.+..+.+. +.||.|++|+.
T Consensus 21 gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~--~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~----~~d~~i~vwd~ 94 (312)
T 4ery_A 21 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY--DGKFEKTISGHKLGISDVAWSSDSNLLVSA----SDDKTLKIWDV 94 (312)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETT--TCCEEEEECCCSSCEEEEEECTTSSEEEEE----ETTSEEEEEET
T ss_pred ccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCC--CcccchhhccCCCceEEEEEcCCCCEEEEE----CCCCEEEEEEC
Confidence 345689999999999999999999999776543 2322222 1222347788886655444333 35899999998
Q ss_pred Ce-eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCC
Q psy4579 117 DA-QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNG 195 (368)
Q Consensus 117 ~~-~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~ 195 (368)
.. +....+.+|...|.+++|+|++ ++|++|+.||.|++||++++. ....+..|..++. +++|+|+ +.
T Consensus 95 ~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~d~~i~iwd~~~~~-------~~~~~~~~~~~v~---~~~~~~~-~~ 162 (312)
T 4ery_A 95 SSGKCLKTLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDVKTGK-------CLKTLPAHSDPVS---AVHFNRD-GS 162 (312)
T ss_dssp TTCCEEEEEECCSSCEEEEEECSSS-SEEEEEETTSCEEEEETTTCC-------EEEEECCCSSCEE---EEEECTT-SS
T ss_pred CCCcEEEEEcCCCCCEEEEEEcCCC-CEEEEEeCCCcEEEEECCCCE-------EEEEecCCCCcEE---EEEEcCC-CC
Confidence 64 5566677899999999999998 999999999999999998764 4677889999996 9999998 89
Q ss_pred eEEEeeCCCcEEEEECCCCCCCCccccceeee-ecccccEeEEEEee--ecccccCCCCccceEEEEeecCCcccccccc
Q psy4579 196 YLLSASDDHTICLWDINATPKENRVIDAKTIF-TGHTAVVEDYSIHR--LILGTHTSDEQNHLLIASVQLPNEDAQFDAS 272 (368)
Q Consensus 196 ~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~v~~v~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 272 (368)
+|++|+.||.|++||++++. .+..+ ..+...+..++|++ ..+.+++.++
T Consensus 163 ~l~~~~~d~~i~~wd~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~--------------------- 214 (312)
T 4ery_A 163 LIVSSSYDGLCRIWDTASGQ-------CLKTLIDDDNPPVSFVKFSPNGKYILAATLDN--------------------- 214 (312)
T ss_dssp EEEEEETTSCEEEEETTTCC-------EEEEECCSSCCCEEEEEECTTSSEEEEEETTT---------------------
T ss_pred EEEEEeCCCcEEEEECCCCc-------eeeEEeccCCCceEEEEECCCCCEEEEEcCCC---------------------
Confidence 99999999999999998863 23333 34667788899976 2233333332
Q ss_pred cccCCCCCcccccCCCCceeeeeecCccccee--EEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeee
Q psy4579 273 NYDTDKGDFGGFGSVSGKIEIEIKINHEGEVN--RARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLR 350 (368)
Q Consensus 273 ~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~--~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 350 (368)
.+.+|+..+++....+. +|...+. ...+++.+..+|++|+.||.|++||++. ...+..+.
T Consensus 215 -------~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~----------~~~~~~~~ 276 (312)
T 4ery_A 215 -------TLKLWDYSKGKCLKTYT-GHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQT----------KEIVQKLQ 276 (312)
T ss_dssp -------EEEEEETTTTEEEEEEC-SSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTT----------CCEEEEEC
T ss_pred -------eEEEEECCCCcEEEEEE-ecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCC----------chhhhhhh
Confidence 34444555555555554 6665433 3455544447888999999999999975 34556788
Q ss_pred cccCceeeecceeeee
Q psy4579 351 GHQKEGLIEGTYNCYL 366 (368)
Q Consensus 351 gh~~~V~~l~w~p~~~ 366 (368)
+|.+.|.+++|+|...
T Consensus 277 ~h~~~v~~~~~~p~~~ 292 (312)
T 4ery_A 277 GHTDVVISTACHPTEN 292 (312)
T ss_dssp CCSSCEEEEEECSSSS
T ss_pred ccCCcEEEEeecCcCC
Confidence 9999999999999753
|
| >2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.1e-30 Score=246.74 Aligned_cols=302 Identities=19% Similarity=0.293 Sum_probs=226.1
Q ss_pred hhhhhhhhhcCcchheeecccccccCceeeEecCCcccccCCCCccccccCcceeeeccccCCCCCcEEEEEEecCCCcc
Q psy4579 17 NEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNEDA 96 (368)
Q Consensus 17 ~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 96 (368)
+...++|+.+...+. .+. ...-++.+++|+|+++.|++++.|+.+++|+.....-... ......|..+.+.++..
T Consensus 201 d~~v~~w~~~~~~~~-~~~--~~~~~v~~~~~s~dg~~l~~~~~d~~i~~w~~~~~~~~~~--~~~~~~v~~v~~~~d~~ 275 (577)
T 2ymu_A 201 DKTVKLWNRNGQLLQ-TLT--GHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTL--TGHSSSVNGVAFRPDGQ 275 (577)
T ss_dssp TSEEEEECTTSCEEE-EEE--CCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEE--CCCSSCEEEEEECTTSS
T ss_pred CCEEEEEeCCCcEEE-EEe--cCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCCEEEEE--ecCCCCEEEEEEcCCCC
Confidence 345677876543322 222 2356789999999999999999999998776432211111 11223466777755544
Q ss_pred ccccCCcccCCCCcccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeec
Q psy4579 97 QFDASNYDTDKGGNVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTG 176 (368)
Q Consensus 97 ~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~ 176 (368)
.+... +.|+.|++|+.+++....+.+|...|++++|+|++ ..|++++.||+|++||.... ....+.+
T Consensus 276 ~l~~~----~~d~~i~~w~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~t~~~d~~i~~w~~~~~--------~~~~~~~ 342 (577)
T 2ymu_A 276 TIASA----SDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDG-QTIASASDDKTVKLWNRNGQ--------HLQTLTG 342 (577)
T ss_dssp EEEEE----ETTSCEEEEETTSCEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTSC--------EEEEECC
T ss_pred EEEEE----eCCCEEEEEeCCCcEEEEEecCCCCeEEEEECCCC-CEEEEEeCCCeEEEEeCCCC--------eeEEEeC
Confidence 33322 35899999999988888888999999999999998 99999999999999998754 4567889
Q ss_pred cccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee--ecccccCCCCccc
Q psy4579 177 HTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LILGTHTSDEQNH 254 (368)
Q Consensus 177 h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~d~~~~ 254 (368)
|...+. +++|+|+ +.+|++|+.||.|++||... ..+..+.+|...|.+++|++ ..+++++.|+.++
T Consensus 343 ~~~~v~---~~~~s~~-g~~l~~~~~dg~v~~~~~~~--------~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~ 410 (577)
T 2ymu_A 343 HSSSVW---GVAFSPD-GQTIASASDDKTVKLWNRNG--------QLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVK 410 (577)
T ss_dssp CSSCEE---EEEECTT-SSEEEEEETTSEEEEEETTC--------CEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEE
T ss_pred CCCCEE---EEEECCC-CCEEEEEeCCCEEEEEcCCC--------CEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEE
Confidence 999995 9999999 99999999999999999643 34677888999999999986 4667777777777
Q ss_pred eEE----------------EEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEE
Q psy4579 255 LLI----------------ASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIAT 318 (368)
Q Consensus 255 ~~~----------------~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~las 318 (368)
+|. ..+.+.+++..+.... ..+.+.+|+. +++....+. +|...|.+++|+|++ .+||+
T Consensus 411 ~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~---~d~~v~~w~~-~~~~~~~~~-~~~~~v~~~~~spd~-~~las 484 (577)
T 2ymu_A 411 LWNRNGQLLQTLTGHSSSVWGVAFSPDDQTIASAS---DDKTVKLWNR-NGQLLQTLT-GHSSSVRGVAFSPDG-QTIAS 484 (577)
T ss_dssp EECTTCCEEEEEECCSSCEEEEEECTTSSEEEEEE---TTSEEEEEET-TSCEEEEEE-CCSSCEEEEEECTTS-CEEEE
T ss_pred EEeCCCCEEEEecCCCCCeEEEEECCCCCEEEEEc---CCCEEEEEEC-CCCEEEEEc-CCCCCEEEEEEcCCC-CEEEE
Confidence 762 2223333333332222 2345667774 455555555 899999999999999 68889
Q ss_pred ecCCCeEEEEECCCCCCCCCCCCCCCCceeeecccCceeeecceeee
Q psy4579 319 KTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 319 gs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p~~ 365 (368)
++.|++|++||.. ...+..+.+|.+.|++++|+|+.
T Consensus 485 ~~~d~~i~iw~~~-----------~~~~~~~~~h~~~v~~l~~s~dg 520 (577)
T 2ymu_A 485 ASDDKTVKLWNRN-----------GQLLQTLTGHSSSVRGVAFSPDG 520 (577)
T ss_dssp EETTSEEEEEETT-----------SCEEEEEECCSSCEEEEEECTTS
T ss_pred EeCCCEEEEEcCC-----------CCEEEEEeCCCCCEEEEEEcCCC
Confidence 9999999999964 34566789999999999999974
|
| >2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A | Back alignment and structure |
|---|
Probab=99.97 E-value=7.8e-31 Score=228.97 Aligned_cols=253 Identities=15% Similarity=0.155 Sum_probs=185.3
Q ss_pred ccccCceeeEecCCcccccCCCCccccccCcceeeeccccCC-CCCcEEEEEEecCC-CccccccCCcccCCCCcccCCC
Q psy4579 38 ALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSD-EQNHLLIASVQLPN-EDAQFDASNYDTDKGGNVQLPN 115 (368)
Q Consensus 38 ~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~g~i~i~~ 115 (368)
.+.-+|.+++|+|++++|++|+.|+.+++|+.....+..... ......|.++.|.+ ......+++ +.||+|++|+
T Consensus 7 ~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~---s~D~~v~iWd 83 (297)
T 2pm7_B 7 AHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASC---SYDGKVMIWK 83 (297)
T ss_dssp SCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEE---ETTTEEEEEE
T ss_pred CCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEE---cCCCEEEEEE
Confidence 356689999999999999999999999777654222222112 11223577888743 223333333 4699999999
Q ss_pred CCee---eeeccccCCCCceeeEecCC--CCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEe
Q psy4579 116 EDAQ---FDASNYDTDKGGYGLSWNPS--LNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWN 190 (368)
Q Consensus 116 ~~~~---~~~~~~~h~~~v~~l~~sp~--~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~ 190 (368)
.... ....+..|...|.+++|+|+ + .+|++|+.||+|++||+++.... ....+.+|...|. +++|+
T Consensus 84 ~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g-~~l~s~s~d~~v~~wd~~~~~~~-----~~~~~~~h~~~v~---~~~~~ 154 (297)
T 2pm7_B 84 EENGRWSQIAVHAVHSASVNSVQWAPHEYG-PMLLVASSDGKVSVVEFKENGTT-----SPIIIDAHAIGVN---SASWA 154 (297)
T ss_dssp BSSSCBCCCEEECCCSSCEEEEEECCGGGC-SEEEEEETTSEEEEEEBCSSSCB-----CCEEEECCSSCEE---EEEEC
T ss_pred cCCCceEEEEEeecCCCceeEEEeCcCCCC-cEEEEEECCCcEEEEEecCCCce-----eeeeeecccCccc---eEeec
Confidence 8653 34456679999999999997 6 89999999999999999865321 2356789999996 99999
Q ss_pred CCC------------CCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee-----ecccccCCCCcc
Q psy4579 191 PSL------------NGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR-----LILGTHTSDEQN 253 (368)
Q Consensus 191 p~~------------~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~-----~~~~~~~~d~~~ 253 (368)
|+. +.+|++|+.|++|++||++++... ......+.+|...|.+++|+| ..+++++.|+.+
T Consensus 155 p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~---~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v 231 (297)
T 2pm7_B 155 PATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQT---YVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTC 231 (297)
T ss_dssp CCC------------CCEEEEEETTSCEEEEEEETTTTE---EEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCE
T ss_pred CCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCce---EEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcE
Confidence 962 468999999999999999875321 123567889999999999987 357788888777
Q ss_pred ceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeee--ecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECC
Q psy4579 254 HLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEI--KINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYT 331 (368)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~--~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~ 331 (368)
++|..... .+...... ...|...|.+++|+|++ .+||+++.||+|++|+..
T Consensus 232 ~iWd~~~~--------------------------~~~~~~~~~~~~~~~~~v~~~~~s~~g-~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 232 IIWTQDNE--------------------------QGPWKKTLLKEEKFPDVLWRASWSLSG-NVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp EEEEESST--------------------------TSCCEEEESSSSCCSSCEEEEEECSSS-CCEEEEETTSCEEEEEEC
T ss_pred EEEEeCCC--------------------------CCccceeeeecccCCCcEEEEEECCCC-CEEEEEcCCCcEEEEEEC
Confidence 77754210 00000111 12678899999999999 678899999999999986
Q ss_pred C
Q psy4579 332 K 332 (368)
Q Consensus 332 ~ 332 (368)
.
T Consensus 285 ~ 285 (297)
T 2pm7_B 285 L 285 (297)
T ss_dssp T
T ss_pred C
Confidence 3
|
| >4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.8e-30 Score=232.66 Aligned_cols=244 Identities=12% Similarity=0.154 Sum_probs=177.4
Q ss_pred cccCceeeEecCCcccccCCCCccccccCcceeeeccccCC---CCCcEEEEEEecCCCccccccCCcccCCCCcccCCC
Q psy4579 39 LEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSD---EQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPN 115 (368)
Q Consensus 39 ~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~ 115 (368)
..-+|.+++|+|+++.++ ++.||.|++|+........... ......|.++.+.+.+..+... +.||.|++|+
T Consensus 93 ~~~~V~~~~~s~d~~~l~-~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sg----s~dg~v~iwd 167 (357)
T 4g56_B 93 TEAGVTDVAWVSEKGILV-ASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSG----GKDFSVKVWD 167 (357)
T ss_dssp CSSCEEEEEEETTTEEEE-EETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEE----ETTSCEEEEE
T ss_pred CCCCEEEEEEcCCCCEEE-EECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEE----eCCCeEEEEE
Confidence 345689999999987664 6778998776543322111111 1223457888886655444332 3589999999
Q ss_pred CCe-eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCC
Q psy4579 116 EDA-QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLN 194 (368)
Q Consensus 116 ~~~-~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~ 194 (368)
... +....+..|...|++++|+|+++.++++++.||+|++||+++++.. ....+..|...+. +++|+|+++
T Consensus 168 ~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~-----~~~~~~~~~~~v~---~v~~sp~~~ 239 (357)
T 4g56_B 168 LSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPA-----TRIDFCASDTIPT---SVTWHPEKD 239 (357)
T ss_dssp TTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCB-----CBCCCTTCCSCEE---EEEECTTST
T ss_pred CCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCcee-----eeeeecccccccc---chhhhhccc
Confidence 864 5566778899999999999998668999999999999999876532 1123445666775 999999867
Q ss_pred CeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee---ecccccCCCCccceEEEEeecCCccccccc
Q psy4579 195 GYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR---LILGTHTSDEQNHLLIASVQLPNEDAQFDA 271 (368)
Q Consensus 195 ~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~---~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 271 (368)
.+|++|+.|+.|++||++++ .+...+.+|...|++++|+| .++++++.|+.+++
T Consensus 240 ~~la~g~~d~~i~~wd~~~~-------~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~i---------------- 296 (357)
T 4g56_B 240 DTFACGDETGNVSLVNIKNP-------DSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAV---------------- 296 (357)
T ss_dssp TEEEEEESSSCEEEEESSCG-------GGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEE----------------
T ss_pred ceEEEeecccceeEEECCCC-------cEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEE----------------
Confidence 89999999999999999886 45678889999999999985 24455554444444
Q ss_pred ccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCC
Q psy4579 272 SNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 272 ~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
|+..++++.. .. +|.+.|++++|+|....+|+|||.||+|++||+..
T Consensus 297 ------------wd~~~~~~~~-~~-~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~ 343 (357)
T 4g56_B 297 ------------LDADFSEVFR-DL-SHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPS 343 (357)
T ss_dssp ------------ECTTSCEEEE-EC-CCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC-
T ss_pred ------------EECCCCcEeE-EC-CCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCC
Confidence 4444454433 33 89999999999995437899999999999999975
|
| >2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.97 E-value=2e-30 Score=236.62 Aligned_cols=272 Identities=12% Similarity=0.129 Sum_probs=198.5
Q ss_pred CceeeEecCCcc-cccCC----------CCccccccCcceeeecc---ccCCCCCcEEEEEEecCCCccccccCCcccCC
Q psy4579 42 PSLTAQWLPDVT-SVQLP----------NEDAQFDASNYDTDKGT---HTSDEQNHLLIASVQLPNEDAQFDASNYDTDK 107 (368)
Q Consensus 42 ~~~~~~~~p~~~-~l~~~----------~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 107 (368)
++.+++|+|+++ +++++ +.|+.+++|+. ..+. ..........|.++.|.+....+..+ +.
T Consensus 14 ~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~--~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~----~~ 87 (416)
T 2pm9_A 14 RTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSL--LAADSEKPIASLQVDSKFNDLDWSHNNKIIAGA----LD 87 (416)
T ss_dssp ESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEES--SSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEE----ES
T ss_pred hcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEc--cCCCCCcEEEEEecCCceEEEEECCCCCeEEEE----cc
Confidence 678899999997 88888 88888866654 4333 12222333458888886655444332 35
Q ss_pred CCcccCCCCCe-----eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcc--cccceeeeccccc
Q psy4579 108 GGNVQLPNEDA-----QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRV--IDAKTIFTGHTAV 180 (368)
Q Consensus 108 ~g~i~i~~~~~-----~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~--~~~~~~~~~h~~~ 180 (368)
||.|++|+... .....+.+|...|++++|+|++..+|++++.||.|++||+.+....... ......+.+|...
T Consensus 88 dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (416)
T 2pm9_A 88 NGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDE 167 (416)
T ss_dssp SSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCC
T ss_pred CCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCC
Confidence 89999999876 4667778899999999999983389999999999999999876521100 0012334678888
Q ss_pred eecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecc------cccEeEEEEeee---cccccCCCC
Q psy4579 181 VEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGH------TAVVEDYSIHRL---ILGTHTSDE 251 (368)
Q Consensus 181 v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~------~~~v~~v~~~~~---~~~~~~~d~ 251 (368)
+. +++|+|+++.+|++++.||.|++||++++ .+...+..+ ...|.+++|+|. ++.+++.++
T Consensus 168 v~---~~~~~~~~~~~l~~~~~dg~v~iwd~~~~-------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~ 237 (416)
T 2pm9_A 168 VI---SLAWNQSLAHVFASAGSSNFASIWDLKAK-------KEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSD 237 (416)
T ss_dssp CC---EEEECSSCTTEEEEESSSSCEEEEETTTT-------EEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCS
T ss_pred ee---EEEeCCCCCcEEEEEcCCCCEEEEECCCC-------CcceEEeccccccccCCceEEEEECCCCCCEEEEEECCC
Confidence 86 99999986789999999999999999886 334555544 788999999862 233333222
Q ss_pred ccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeec-CcccceeEEEEeC-CCCcEEEEecCCCeEEEEE
Q psy4579 252 QNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKI-NHEGEVNRARYMP-QNPCVIATKTPSSDVLVFD 329 (368)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~-~h~~~i~~~~~~p-~~~~~lasgs~Dg~i~iwd 329 (368)
..+.+.+|+..++........ +|...|.+++|+| ++ .+|++++.||+|++||
T Consensus 238 -------------------------~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~~l~s~~~dg~v~~wd 291 (416)
T 2pm9_A 238 -------------------------NDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDE-HLLLSSGRDNTVLLWN 291 (416)
T ss_dssp -------------------------SSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCS-SCEEEEESSSEEEEEC
T ss_pred -------------------------CCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCC-CeEEEEeCCCCEEEee
Confidence 111344455555433333333 7999999999999 66 7888999999999999
Q ss_pred CCCCCCCCCCCCCCCCceeeecccCceeeecceeee
Q psy4579 330 YTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p~~ 365 (368)
++. ..++..+.+|...|++++|+|..
T Consensus 292 ~~~----------~~~~~~~~~~~~~v~~~~~s~~~ 317 (416)
T 2pm9_A 292 PES----------AEQLSQFPARGNWCFKTKFAPEA 317 (416)
T ss_dssp SSS----------CCEEEEEECSSSCCCCEEECTTC
T ss_pred CCC----------CccceeecCCCCceEEEEECCCC
Confidence 975 45566788999999999999964
|
| >3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.8e-30 Score=234.60 Aligned_cols=266 Identities=15% Similarity=0.182 Sum_probs=186.3
Q ss_pred hhhhhhhhhhcCcchheeecccccccCceeeEecCCcccccCCCCccccccCcceeeec---cc--cCCC-CCcEEEEEE
Q psy4579 16 INEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKG---TH--TSDE-QNHLLIASV 89 (368)
Q Consensus 16 ~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~---~~--~~~~-~~~~~i~~~ 89 (368)
.+...++|+..+......+..+ .-++.+++|+|++++|++|+.|+.+.+|+...... .. .... .....+.++
T Consensus 86 ~D~~v~iWd~~~~~~~~~~~~h--~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~ 163 (380)
T 3iz6_a 86 QDGRLIVWNALTSQKTHAIKLH--CPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSC 163 (380)
T ss_dssp TTSEEEEEETTTTEEEEEEECC--CTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCC
T ss_pred CCCeEEEEECCCCccceEEecC--CCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEE
Confidence 3567889988776655444433 34688999999999999999999997776543211 00 0001 111234445
Q ss_pred ecCCCccccccCCcccCCCCcccCCCCCeee-eecc-----ccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCC
Q psy4579 90 QLPNEDAQFDASNYDTDKGGNVQLPNEDAQF-DASN-----YDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPK 163 (368)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~-~~~~-----~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~ 163 (368)
.+.+......++ .+.||+|++||..... ...+ .+|...|.+++|+|.+.++|++|+.||+|++||++....
T Consensus 164 ~~~~~~~~~l~s---~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~ 240 (380)
T 3iz6_a 164 QYVPDQETRLIT---GSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSR 240 (380)
T ss_dssp BCCSSSSSCEEE---ECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCC
T ss_pred EEecCCCCEEEE---ECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCc
Confidence 553332222222 2469999999987532 2222 579999999999884348999999999999999975432
Q ss_pred CCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecc-------cccEeE
Q psy4579 164 ENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGH-------TAVVED 236 (368)
Q Consensus 164 ~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~-------~~~v~~ 236 (368)
+...+.+|.+.|. +++|+|+ +.+|++|+.||+|++||++++. ++..+..+ ...|.+
T Consensus 241 ------~~~~~~~h~~~v~---~v~~~p~-~~~l~s~s~D~~i~lwd~~~~~-------~~~~~~~~~~~~~~~~~~v~~ 303 (380)
T 3iz6_a 241 ------AVRTYHGHEGDIN---SVKFFPD-GQRFGTGSDDGTCRLFDMRTGH-------QLQVYNREPDRNDNELPIVTS 303 (380)
T ss_dssp ------CCEEECCCSSCCC---EEEECTT-SSEEEEECSSSCEEEEETTTTE-------EEEEECCCCSSSCCSSCSCSE
T ss_pred ------ceEEECCcCCCeE---EEEEecC-CCeEEEEcCCCeEEEEECCCCc-------EEEEecccccccccccCceEE
Confidence 5678899999996 9999998 9999999999999999999873 33333322 234788
Q ss_pred EEEee--ecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeee---ecCcccceeEEEEeCC
Q psy4579 237 YSIHR--LILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEI---KINHEGEVNRARYMPQ 311 (368)
Q Consensus 237 v~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~---~~~h~~~i~~~~~~p~ 311 (368)
++|++ ..+.+++.++.+++ |+...++....+ ..+|.+.|++++|+|+
T Consensus 304 ~~~s~~g~~l~~g~~dg~i~v----------------------------wd~~~~~~~~~~~~~~~~h~~~v~~l~~s~d 355 (380)
T 3iz6_a 304 VAFSISGRLLFAGYSNGDCYV----------------------------WDTLLAEMVLNLGTLQNSHEGRISCLGLSSD 355 (380)
T ss_dssp EEECSSSSEEEEECTTSCEEE----------------------------EETTTCCEEEEECCSCSSCCCCCCEEEECSS
T ss_pred EEECCCCCEEEEEECCCCEEE----------------------------EECCCCceEEEEecccCCCCCceEEEEECCC
Confidence 88875 34444444444444 333344444333 2379999999999999
Q ss_pred CCcEEEEecCCCeEEEEECCC
Q psy4579 312 NPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 312 ~~~~lasgs~Dg~i~iwd~~~ 332 (368)
+ .+|+|||.||+|++|++..
T Consensus 356 g-~~l~sgs~D~~i~iW~~~~ 375 (380)
T 3iz6_a 356 G-SALCTGSWDKNLKIWAFSG 375 (380)
T ss_dssp S-SEEEEECTTSCEEEEECCS
T ss_pred C-CEEEEeeCCCCEEEEecCC
Confidence 9 6888999999999999974
|
| >2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.7e-30 Score=237.17 Aligned_cols=270 Identities=11% Similarity=0.201 Sum_probs=197.7
Q ss_pred hhhhhhhhhcCcchheeecccccccCceeeEecCCcccccCCCCccccccCcceeee-c-cccCC-CCCcEEEEEEecCC
Q psy4579 17 NEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDK-G-THTSD-EQNHLLIASVQLPN 93 (368)
Q Consensus 17 ~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~-~-~~~~~-~~~~~~i~~~~~~~ 93 (368)
+...++|+.........+.......++.+++|+|++++|++++.|+.+.+|+..... + ..... ......|.++.+.+
T Consensus 44 d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 123 (416)
T 2pm9_A 44 DSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNA 123 (416)
T ss_dssp CCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECS
T ss_pred CCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcC
Confidence 446788988876543334444467789999999999999999999999777665410 1 11111 11223467777765
Q ss_pred CccccccCCcccCCCCcccCCCCCeee-------e---eccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCC
Q psy4579 94 EDAQFDASNYDTDKGGNVQLPNEDAQF-------D---ASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPK 163 (368)
Q Consensus 94 ~~~~~~~~~~~~~~~g~i~i~~~~~~~-------~---~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~ 163 (368)
.+....+++ +.||.|++|+..... . .....|...|.+++|+|++..+|++++.||.|++||++++.
T Consensus 124 ~~~~~l~s~---~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~- 199 (416)
T 2pm9_A 124 KQDNVLASG---GNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKK- 199 (416)
T ss_dssp SSTTBEEEE---CSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTE-
T ss_pred CCCCEEEEE---cCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCC-
Confidence 523333332 358999999986532 1 22357999999999999954899999999999999998764
Q ss_pred CCcccccceeeecc------ccceecceeeEEeCCCCCeEEEeeCCC---cEEEEECCCCCCCCccccceeeee-ccccc
Q psy4579 164 ENRVIDAKTIFTGH------TAVVEVRYGLSWNPSLNGYLLSASDDH---TICLWDINATPKENRVIDAKTIFT-GHTAV 233 (368)
Q Consensus 164 ~~~~~~~~~~~~~h------~~~v~~~~~i~~~p~~~~~l~s~s~dg---~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~ 233 (368)
....+..| ...+. +++|+|++..++++++.|+ .|++||+++.. .+...+. +|...
T Consensus 200 ------~~~~~~~~~~~~~~~~~v~---~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~------~~~~~~~~~~~~~ 264 (416)
T 2pm9_A 200 ------EVIHLSYTSPNSGIKQQLS---VVEWHPKNSTRVATATGSDNDPSILIWDLRNAN------TPLQTLNQGHQKG 264 (416)
T ss_dssp ------EEEEECCCCCSSCCCCCEE---EEEECSSCTTEEEEEECCSSSCCCCEEETTSTT------SCSBCCCSCCSSC
T ss_pred ------cceEEeccccccccCCceE---EEEECCCCCCEEEEEECCCCCceEEEEeCCCCC------CCcEEeecCccCc
Confidence 34555555 67785 9999998557999999999 99999998863 2345666 89999
Q ss_pred EeEEEEee---ecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeC
Q psy4579 234 VEDYSIHR---LILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMP 310 (368)
Q Consensus 234 v~~v~~~~---~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p 310 (368)
|.+++|+| .++.+++.|+ .+.+|+..+++....+. +|...|.+++|+|
T Consensus 265 v~~~~~s~~~~~~l~s~~~dg----------------------------~v~~wd~~~~~~~~~~~-~~~~~v~~~~~s~ 315 (416)
T 2pm9_A 265 ILSLDWCHQDEHLLLSSGRDN----------------------------TVLLWNPESAEQLSQFP-ARGNWCFKTKFAP 315 (416)
T ss_dssp EEEEEECSSCSSCEEEEESSS----------------------------EEEEECSSSCCEEEEEE-CSSSCCCCEEECT
T ss_pred eeEEEeCCCCCCeEEEEeCCC----------------------------CEEEeeCCCCccceeec-CCCCceEEEEECC
Confidence 99999975 2344443333 34445555666666665 8999999999999
Q ss_pred CCCcEEEEecCCCeEEEEECCCCC
Q psy4579 311 QNPCVIATKTPSSDVLVFDYTKHP 334 (368)
Q Consensus 311 ~~~~~lasgs~Dg~i~iwd~~~~~ 334 (368)
+++.+|++++.||.|++||+....
T Consensus 316 ~~~~~l~s~~~d~~i~iw~~~~~~ 339 (416)
T 2pm9_A 316 EAPDLFACASFDNKIEVQTLQNLT 339 (416)
T ss_dssp TCTTEEEECCSSSEEEEEESCCCC
T ss_pred CCCCEEEEEecCCcEEEEEccCCC
Confidence 987789999999999999998654
|
| >4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-30 Score=240.06 Aligned_cols=272 Identities=13% Similarity=0.134 Sum_probs=195.6
Q ss_pred ccCceeeEecC-CcccccCCCCccccccCcceeeeccccCC-CCCcEEEEEEecCCCccccccCCcccCCCCcccCCCCC
Q psy4579 40 EWPSLTAQWLP-DVTSVQLPNEDAQFDASNYDTDKGTHTSD-EQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNED 117 (368)
Q Consensus 40 ~~~~~~~~~~p-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~ 117 (368)
+-.|.|++|+| +.+.||+|+.||.|.+|++.......... ......|.++.|.+.+....+++ +.||+|++||.+
T Consensus 119 ~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~---s~D~~v~iwd~~ 195 (435)
T 4e54_B 119 DRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYAS---SMEGTTRLQDFK 195 (435)
T ss_dssp SSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEE---CSSSCEEEEETT
T ss_pred CCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEE---eCCCEEEEeecc
Confidence 44599999999 56789999999999888765443322222 22334578888865433333222 468999999998
Q ss_pred eeeeeccc---cCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCC
Q psy4579 118 AQFDASNY---DTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLN 194 (368)
Q Consensus 118 ~~~~~~~~---~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~ 194 (368)
+.....+. .+...+.+++|+|++ .+|++|+.||.|++||++.. .+..+.+|...|. +++|+|++.
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~g~~dg~i~~wd~~~~--------~~~~~~~h~~~v~---~v~~~p~~~ 263 (435)
T 4e54_B 196 GNILRVFASSDTINIWFCSLDVSASS-RMVVTGDNVGNVILLNMDGK--------ELWNLRMHKKKVT---HVALNPCCD 263 (435)
T ss_dssp SCEEEEEECCSSCSCCCCCEEEETTT-TEEEEECSSSBEEEEESSSC--------BCCCSBCCSSCEE---EEEECTTCS
T ss_pred CCceeEEeccCCCCccEEEEEECCCC-CEEEEEeCCCcEeeeccCcc--------eeEEEecccceEE---eeeecCCCc
Confidence 75544433 344568899999998 99999999999999999754 4567889999996 999999856
Q ss_pred CeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee--ecccccCCCCccceEEEEee-----------
Q psy4579 195 GYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LILGTHTSDEQNHLLIASVQ----------- 261 (368)
Q Consensus 195 ~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~d~~~~~~~~~~~----------- 261 (368)
.+|++|+.|++|++||+++..... ......+|...|++++|+| ..+.+++.|+.+++|.....
T Consensus 264 ~~~~s~s~d~~v~iwd~~~~~~~~----~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~ 339 (435)
T 4e54_B 264 WFLATASVDQTVKIWDLRQVRGKA----SFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPH 339 (435)
T ss_dssp SEEEEEETTSBCCEEETTTCCSSS----CCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCC
T ss_pred eEEEEecCcceeeEEecccccccc----eEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccc
Confidence 689999999999999998864322 1233457999999999986 57788888888888853210
Q ss_pred ------------cCCccccccccccc---------CCCCCcccccCCCCceeeeeecCcccceeEE-EEeCCCCcEEEEe
Q psy4579 262 ------------LPNEDAQFDASNYD---------TDKGDFGGFGSVSGKIEIEIKINHEGEVNRA-RYMPQNPCVIATK 319 (368)
Q Consensus 262 ------------~~~~~~~~~~~~~d---------~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~-~~~p~~~~~lasg 319 (368)
+.+....+.+...+ ...+.+.+|+..+++....+..+|...|.++ +|+|++ .+||+|
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg-~~lasg 418 (435)
T 4e54_B 340 RHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMG-DTLASA 418 (435)
T ss_dssp CCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTS-SCEEEE
T ss_pred cccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCC-CEEEEE
Confidence 00001111111111 0112466788888888887776899999887 699999 678787
Q ss_pred cCCCeEEEEECCC
Q psy4579 320 TPSSDVLVFDYTK 332 (368)
Q Consensus 320 s~Dg~i~iwd~~~ 332 (368)
+ |++|+|||++.
T Consensus 419 ~-d~~i~iW~~~~ 430 (435)
T 4e54_B 419 M-GYHILIWSQQE 430 (435)
T ss_dssp C-SSEEEECCCC-
T ss_pred c-CCcEEEEECCc
Confidence 5 88999999975
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.8e-30 Score=234.32 Aligned_cols=304 Identities=11% Similarity=0.074 Sum_probs=219.0
Q ss_pred eeecccccccCceeeEecCCcc-cccCCCCccccccCccee--eecc------------ccCCCC-----CcEEEEEEec
Q psy4579 32 DLVMTHALEWPSLTAQWLPDVT-SVQLPNEDAQFDASNYDT--DKGT------------HTSDEQ-----NHLLIASVQL 91 (368)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~p~~~-~l~~~~~~~~~~~~~~~~--~~~~------------~~~~~~-----~~~~i~~~~~ 91 (368)
..+..+...-++.+++|+|+++ +|++++.|+.+.+|+... ..+. +..... ....|.++.|
T Consensus 37 ~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 116 (425)
T 1r5m_A 37 KILKEIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAW 116 (425)
T ss_dssp EECEEEEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEE
T ss_pred hheeeeeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEE
Confidence 3344455567899999999999 999999999997765510 2222 111110 2236888888
Q ss_pred CCCccccccCCcccCCCCcccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccc
Q psy4579 92 PNEDAQFDASNYDTDKGGNVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAK 171 (368)
Q Consensus 92 ~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~ 171 (368)
.+.+..+... +.+|.|++|+.++.....+..|...|.+++|+|++ .+|++++.||.|++||+.++. ..
T Consensus 117 s~~~~~l~~~----~~dg~i~i~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~-------~~ 184 (425)
T 1r5m_A 117 SHDGNSIVTG----VENGELRLWNKTGALLNVLNFHRAPIVSVKWNKDG-THIISMDVENVTILWNVISGT-------VM 184 (425)
T ss_dssp CTTSSEEEEE----ETTSCEEEEETTSCEEEEECCCCSCEEEEEECTTS-SEEEEEETTCCEEEEETTTTE-------EE
T ss_pred cCCCCEEEEE----eCCCeEEEEeCCCCeeeeccCCCccEEEEEECCCC-CEEEEEecCCeEEEEECCCCc-------EE
Confidence 6655444333 35899999998888888888999999999999998 899999999999999998764 44
Q ss_pred eeeeccccc---------------eecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeE
Q psy4579 172 TIFTGHTAV---------------VEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVED 236 (368)
Q Consensus 172 ~~~~~h~~~---------------v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~ 236 (368)
..+..+... +. +++|+|+ ..+++++.||.|++||++++ .+...+.+|...|.+
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~--~~~~~~~~~g~i~~~d~~~~-------~~~~~~~~~~~~i~~ 252 (425)
T 1r5m_A 185 QHFELKETGGSSINAENHSGDGSLGV---DVEWVDD--DKFVIPGPKGAIFVYQITEK-------TPTGKLIGHHGPISV 252 (425)
T ss_dssp EEECCC---------------CCCBS---CCEEEET--TEEEEECGGGCEEEEETTCS-------SCSEEECCCSSCEEE
T ss_pred EEeeccccCccceeeccccCCcceee---EEEEcCC--CEEEEEcCCCeEEEEEcCCC-------ceeeeeccCCCceEE
Confidence 556666555 64 9999985 66899999999999999886 345677789999999
Q ss_pred EEEee--ecccccCCCCccceEEE-----------------EeecCCcccccccccccCCCCCcccccCCCCceeeeeec
Q psy4579 237 YSIHR--LILGTHTSDEQNHLLIA-----------------SVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKI 297 (368)
Q Consensus 237 v~~~~--~~~~~~~~d~~~~~~~~-----------------~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 297 (368)
++|++ ..+.+++.++.+++|.. .+.+.++. .+... ...+.+.+|+..+++....+.
T Consensus 253 ~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~---~~d~~i~i~d~~~~~~~~~~~- 327 (425)
T 1r5m_A 253 LEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISC---SMDGSVRLWSLKQNTLLALSI- 327 (425)
T ss_dssp EEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEE---ETTSEEEEEETTTTEEEEEEE-
T ss_pred EEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEE---eCCCcEEEEECCCCcEeEecc-
Confidence 99986 35667777777777632 22222222 22211 234568889998888777776
Q ss_pred CcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCC----------CCCCCCceeeecccC--ceeeecceeee
Q psy4579 298 NHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDP----------NGECHPDLRLRGHQK--EGLIEGTYNCY 365 (368)
Q Consensus 298 ~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~----------~~~~~~~~~~~gh~~--~V~~l~w~p~~ 365 (368)
.|...|.+++|+|++ .+|++|+.||.|++||++........ .....++..+.+|.. .|++++|+|+.
T Consensus 328 ~~~~~i~~~~~s~~~-~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 406 (425)
T 1r5m_A 328 VDGVPIFAGRISQDG-QKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAG 406 (425)
T ss_dssp CTTCCEEEEEECTTS-SEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTS
T ss_pred cCCccEEEEEEcCCC-CEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCC
Confidence 799999999999999 68889999999999999753210000 000114567788977 99999999874
|
| >2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A | Back alignment and structure |
|---|
Probab=99.97 E-value=7.3e-30 Score=223.57 Aligned_cols=220 Identities=18% Similarity=0.216 Sum_probs=177.3
Q ss_pred EEEEEecCCCccccccCCcccCCCCcccCCCCCe-eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCC
Q psy4579 85 LIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDA-QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPK 163 (368)
Q Consensus 85 ~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~-~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~ 163 (368)
.|.++.|.+....+.++ +.||.|++|+... .....+..|..+|.+++|+|++ ++|++|+.|++|++||+.++.
T Consensus 15 ~V~~~~fsp~~~~l~s~----~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~s~d~~i~vwd~~~~~- 88 (304)
T 2ynn_A 15 RVKGIDFHPTEPWVLTT----LYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARK-NWIIVGSDDFRIRVFNYNTGE- 88 (304)
T ss_dssp CEEEEEECSSSSEEEEE----ETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGG-TEEEEEETTSEEEEEETTTCC-
T ss_pred ceEEEEECCCCCEEEEE----cCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCC-CEEEEECCCCEEEEEECCCCc-
Confidence 47788886665544433 3589999999875 5566677899999999999998 999999999999999998874
Q ss_pred CCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee--
Q psy4579 164 ENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR-- 241 (368)
Q Consensus 164 ~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~-- 241 (368)
....+.+|...|. +++|+|+ +.+|++|+.||+|++||++++. .....+.+|...|.+++|+|
T Consensus 89 ------~~~~~~~h~~~v~---~~~~~~~-~~~l~sgs~D~~v~lWd~~~~~------~~~~~~~~h~~~v~~v~~~p~~ 152 (304)
T 2ynn_A 89 ------KVVDFEAHPDYIR---SIAVHPT-KPYVLSGSDDLTVKLWNWENNW------ALEQTFEGHEHFVMCVAFNPKD 152 (304)
T ss_dssp ------EEEEEECCSSCEE---EEEECSS-SSEEEEEETTSCEEEEEGGGTT------EEEEEECCCCSCEEEEEECTTC
T ss_pred ------EEEEEeCCCCcEE---EEEEcCC-CCEEEEECCCCeEEEEECCCCc------chhhhhcccCCcEEEEEECCCC
Confidence 5678899999996 9999999 8999999999999999998753 23467889999999999986
Q ss_pred -ecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeC--CCCcEEEE
Q psy4579 242 -LILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMP--QNPCVIAT 318 (368)
Q Consensus 242 -~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p--~~~~~las 318 (368)
..+++++.|+.+++|. ...+.....+..+|...|..+.|+| ++ .+|++
T Consensus 153 ~~~l~sgs~D~~v~iwd----------------------------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~l~s 203 (304)
T 2ynn_A 153 PSTFASGCLDRTVKVWS----------------------------LGQSTPNFTLTTGQERGVNYVDYYPLPDK-PYMIT 203 (304)
T ss_dssp TTEEEEEETTSEEEEEE----------------------------TTCSSCSEEEECCCTTCEEEEEECCSTTC-CEEEE
T ss_pred CCEEEEEeCCCeEEEEE----------------------------CCCCCccceeccCCcCcEEEEEEEEcCCC-CEEEE
Confidence 3566666666665543 2223333444446778999999988 44 58889
Q ss_pred ecCCCeEEEEECCCCCCCCCCCCCCCCceeeecccCceeeecceeee
Q psy4579 319 KTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 319 gs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p~~ 365 (368)
|+.|++|++||++. ...+..+.+|...|.+++|+|..
T Consensus 204 ~s~D~~i~iWd~~~----------~~~~~~~~~h~~~v~~~~~~p~~ 240 (304)
T 2ynn_A 204 ASDDLTIKIWDYQT----------KSCVATLEGHMSNVSFAVFHPTL 240 (304)
T ss_dssp EETTSEEEEEETTT----------TEEEEEEECCSSCEEEEEECSSS
T ss_pred EcCCCeEEEEeCCC----------CccceeeCCCCCCEEEEEECCCC
Confidence 99999999999975 34566789999999999999975
|
| >3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* | Back alignment and structure |
|---|
Probab=99.97 E-value=6.2e-30 Score=225.58 Aligned_cols=266 Identities=12% Similarity=0.129 Sum_probs=193.5
Q ss_pred cccCceeeEecCCc-ccccCCCCccccccCcceeee---ccccCCC-CCcEEEEEEecCCCccccccCCcccCCCCcccC
Q psy4579 39 LEWPSLTAQWLPDV-TSVQLPNEDAQFDASNYDTDK---GTHTSDE-QNHLLIASVQLPNEDAQFDASNYDTDKGGNVQL 113 (368)
Q Consensus 39 ~~~~~~~~~~~p~~-~~l~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i 113 (368)
+.-+|.+++|+|++ +.|++|+.|+.+++|+..... +...... .....|.++.+.+++..+..+ +.||+|++
T Consensus 16 H~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~----s~D~~v~~ 91 (319)
T 3frx_A 16 HNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSA----SWDKTLRL 91 (319)
T ss_dssp CSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEE----ETTSEEEE
T ss_pred ccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEE----eCCCEEEE
Confidence 45689999999975 789999999999777654221 1111111 122346777776655443332 35899999
Q ss_pred CCCCe-eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCC
Q psy4579 114 PNEDA-QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPS 192 (368)
Q Consensus 114 ~~~~~-~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~ 192 (368)
|+... +....+.+|...|.+++|+|++ .+|++|+.|++|++||++.. ....+.+|...+. ++.|+|.
T Consensus 92 wd~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~s~D~~i~vwd~~~~--------~~~~~~~h~~~v~---~~~~~~~ 159 (319)
T 3frx_A 92 WDVATGETYQRFVGHKSDVMSVDIDKKA-SMIISGSRDKTIKVWTIKGQ--------CLATLLGHNDWVS---QVRVVPN 159 (319)
T ss_dssp EETTTTEEEEEEECCSSCEEEEEECTTS-CEEEEEETTSCEEEEETTSC--------EEEEECCCSSCEE---EEEECCC
T ss_pred EECCCCCeeEEEccCCCcEEEEEEcCCC-CEEEEEeCCCeEEEEECCCC--------eEEEEeccCCcEE---EEEEccC
Confidence 99864 5566778999999999999998 99999999999999999753 5678889999996 9999985
Q ss_pred -----CCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee--ecccccCCCCccceEEE-------
Q psy4579 193 -----LNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LILGTHTSDEQNHLLIA------- 258 (368)
Q Consensus 193 -----~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~d~~~~~~~~------- 258 (368)
++..+++++.|+.|++||+++. .....+.+|...|++++|+| ..+++++.|+.+++|..
T Consensus 160 ~~~~~~~~~l~s~~~d~~i~~wd~~~~-------~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~ 232 (319)
T 3frx_A 160 EKADDDSVTIISAGNDKMVKAWNLNQF-------QIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMY 232 (319)
T ss_dssp ------CCEEEEEETTSCEEEEETTTT-------EEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEE
T ss_pred CCCCCCccEEEEEeCCCEEEEEECCcc-------hhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEE
Confidence 1448999999999999999876 44667889999999999986 57888888888888842
Q ss_pred ---------EeecCCcccccccccccCCCCCcccccCCCCceeeeee-------cCcccceeEEEEeCCCCcEEEEecCC
Q psy4579 259 ---------SVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIK-------INHEGEVNRARYMPQNPCVIATKTPS 322 (368)
Q Consensus 259 ---------~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~-------~~h~~~i~~~~~~p~~~~~lasgs~D 322 (368)
.+.+.++...+... . ...+.+|+...+.....+. ..|...+.+++|+|+| .+|++|+.|
T Consensus 233 ~~~~~~~v~~~~~sp~~~~la~~-~---~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg-~~l~sg~~D 307 (319)
T 3frx_A 233 TLSAQDEVFSLAFSPNRYWLAAA-T---ATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADG-QTLFAGYTD 307 (319)
T ss_dssp EEECCSCEEEEEECSSSSEEEEE-E---TTEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTS-SEEEEEETT
T ss_pred EecCCCcEEEEEEcCCCCEEEEE-c---CCCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCC-CEEEEeecC
Confidence 22222222222111 1 1123444444443333222 1456789999999999 688899999
Q ss_pred CeEEEEECCC
Q psy4579 323 SDVLVFDYTK 332 (368)
Q Consensus 323 g~i~iwd~~~ 332 (368)
|+|++||+.+
T Consensus 308 g~i~vWd~~t 317 (319)
T 3frx_A 308 NVIRVWQVMT 317 (319)
T ss_dssp SCEEEEEEEE
T ss_pred ceEEEEEEee
Confidence 9999999863
|
| >2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.7e-30 Score=229.00 Aligned_cols=274 Identities=15% Similarity=0.190 Sum_probs=187.7
Q ss_pred hhhhhhhhhcCc--chheeecccccccCceeeEecCCcccccCCCCccccccCcceeee-----ccccCCCC-CcEEEEE
Q psy4579 17 NEEYKIWKKNTP--FLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDK-----GTHTSDEQ-NHLLIAS 88 (368)
Q Consensus 17 ~~~~~~w~~~~~--~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~~~-~~~~i~~ 88 (368)
+...++|+.... .+...+....+.-++.+++|+|++++|++++.|+.+++|+..... ........ ....|.+
T Consensus 33 D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~ 112 (330)
T 2hes_X 33 DRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKG 112 (330)
T ss_dssp SSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEE
T ss_pred CCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEE
Confidence 456788887653 222222222256689999999999999999999999877653211 11111111 2234778
Q ss_pred EecCCCccccccCCcccCCCCcccCCCCC-e----eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCC
Q psy4579 89 VQLPNEDAQFDASNYDTDKGGNVQLPNED-A----QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPK 163 (368)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~g~i~i~~~~-~----~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~ 163 (368)
+.|.+.+..+... +.||+|++|+.. . +....+.+|...|.+++|+|++ .+|++|+.|++|++||..++..
T Consensus 113 v~~sp~g~~las~----s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~-~~l~s~s~D~~i~iW~~~~~~~ 187 (330)
T 2hes_X 113 VAWSNDGYYLATC----SRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSE-ALLASSSYDDTVRIWKDYDDDW 187 (330)
T ss_dssp EEECTTSCEEEEE----ETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSS-SEEEEEETTSCEEEEEEETTEE
T ss_pred EEECCCCCEEEEE----eCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCC-CEEEEEcCCCeEEEEECCCCCe
Confidence 8886655433332 368999999983 2 3455677899999999999998 8999999999999999876421
Q ss_pred CCcccccceeeeccccceecceeeEEeCCC-CCeEEEeeCCCcEEEEECCCCCCCC-ccccceeeeec-ccccEeEEEEe
Q psy4579 164 ENRVIDAKTIFTGHTAVVEVRYGLSWNPSL-NGYLLSASDDHTICLWDINATPKEN-RVIDAKTIFTG-HTAVVEDYSIH 240 (368)
Q Consensus 164 ~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~-~~~l~s~s~dg~i~iwd~~~~~~~~-~~~~~~~~~~~-~~~~v~~v~~~ 240 (368)
.+...+.+|.+.|. +++|+|+. +.+|++|+.|++|++||++.+.... ..+.+...+.+ |...|.+++|+
T Consensus 188 -----~~~~~~~~h~~~v~---~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s 259 (330)
T 2hes_X 188 -----ECVAVLNGHEGTVW---SSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWG 259 (330)
T ss_dssp -----EEEEEECCCSSCEE---EEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEEC
T ss_pred -----eEEEEccCCCCcEE---EEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEc
Confidence 25678899999995 99999973 3579999999999999987642211 11123344444 88999999997
Q ss_pred e-ecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCc--eeeeeecCccc-ceeEEEEeC--CCCc
Q psy4579 241 R-LILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGK--IEIEIKINHEG-EVNRARYMP--QNPC 314 (368)
Q Consensus 241 ~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~--~~~~~~~~h~~-~i~~~~~~p--~~~~ 314 (368)
+ ..+++++.|+.+++|... +++ .......+|.. .|++++|+| ++ .
T Consensus 260 ~~~~l~s~~~dg~v~iw~~~----------------------------~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~-~ 310 (330)
T 2hes_X 260 FNGLIASVGADGVLAVYEEV----------------------------DGEWKVFAKRALCHGVYEINVVKWLELNGK-T 310 (330)
T ss_dssp TTSCEEEEETTSCEEEEEEE----------------------------TTEEEEEEEESCTTTTSCEEEEEEC------C
T ss_pred CCCEEEEEeCCCEEEEEEcC----------------------------CCceEEEeccccccccceEEEEEEecCCCc-e
Confidence 4 345666666666665432 221 12222236877 899999999 45 6
Q ss_pred EEEEecCCCeEEEEECCC
Q psy4579 315 VIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 315 ~lasgs~Dg~i~iwd~~~ 332 (368)
+||||+.||+|++||++.
T Consensus 311 ~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 311 ILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp CEEEEETTSEEEEEEC--
T ss_pred EEEEecCCCcEEEEEecc
Confidence 889999999999999863
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A | Back alignment and structure |
|---|
Probab=99.97 E-value=3.9e-29 Score=228.55 Aligned_cols=279 Identities=13% Similarity=0.034 Sum_probs=199.8
Q ss_pred ceeeEecCCcccccCCCCccccccCcceeeeccccCCCCCcEEEEEEecCCCccccccCCcccCCCCcccCCCCCeeeee
Q psy4579 43 SLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQFDA 122 (368)
Q Consensus 43 ~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~ 122 (368)
+.+++|+|++++|++++.|+.+.+|+. ..+...........+....+++.+..+..+ +.||.|++|+.......
T Consensus 59 ~~~~~~s~~g~~l~~~~~d~~v~i~d~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~dg~i~iwd~~~~~~~ 132 (420)
T 3vl1_A 59 GKGNTFEKVGSHLYKARLDGHDFLFNT--IIRDGSKMLKRADYTAVDTAKLQMRRFILG----TTEGDIKVLDSNFNLQR 132 (420)
T ss_dssp CTTCEEEEEETTEEEEEETTEEEEEEC--CSEETTTTSCSCCEEEEEEECSSSCEEEEE----ETTSCEEEECTTSCEEE
T ss_pred ccceeeeecCCeEEEEEcCCcEEEEEe--cccceeeEEecCCceEEEEEecCCCEEEEE----ECCCCEEEEeCCCccee
Confidence 457999999999999999999866654 444443333333344444455544443333 35899999998765444
Q ss_pred c-cccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEee
Q psy4579 123 S-NYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSAS 201 (368)
Q Consensus 123 ~-~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s 201 (368)
. +.+|.+.|++++|+|++ .+|++|+.||.|++||+.++. ....+.+|...|. +++|+|+ +.+|++++
T Consensus 133 ~~~~~h~~~v~~~~~~~~~-~~l~s~s~d~~i~iwd~~~~~-------~~~~~~~h~~~v~---~~~~~~~-~~~l~s~~ 200 (420)
T 3vl1_A 133 EIDQAHVSEITKLKFFPSG-EALISSSQDMQLKIWSVKDGS-------NPRTLIGHRATVT---DIAIIDR-GRNVLSAS 200 (420)
T ss_dssp EETTSSSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTCC-------CCEEEECCSSCEE---EEEEETT-TTEEEEEE
T ss_pred eecccccCccEEEEECCCC-CEEEEEeCCCeEEEEeCCCCc-------CceEEcCCCCcEE---EEEEcCC-CCEEEEEc
Confidence 4 46899999999999998 899999999999999998764 4678899999996 9999998 99999999
Q ss_pred CCCcEEEEECCCCCCCCccccceeeee---cccccEeEEEEeeecc---cccCCCCccceEEEEeecCCccccccccccc
Q psy4579 202 DDHTICLWDINATPKENRVIDAKTIFT---GHTAVVEDYSIHRLIL---GTHTSDEQNHLLIASVQLPNEDAQFDASNYD 275 (368)
Q Consensus 202 ~dg~i~iwd~~~~~~~~~~~~~~~~~~---~~~~~v~~v~~~~~~~---~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d 275 (368)
.||.|++||++++ .+...+. .+...+.++++.+.-- ..... -.+..+.+.+++..+...
T Consensus 201 ~d~~v~iwd~~~~-------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-----~~v~~~~~s~~~~~l~~~--- 265 (420)
T 3vl1_A 201 LDGTIRLWECGTG-------TTIHTFNRKENPHDGVNSIALFVGTDRQLHEIST-----SKKNNLEFGTYGKYVIAG--- 265 (420)
T ss_dssp TTSCEEEEETTTT-------EEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCC-----CCCCTTCSSCTTEEEEEE---
T ss_pred CCCcEEEeECCCC-------ceeEEeecCCCCCCCccEEEEecCCcceeeeccc-----CcccceEEcCCCCEEEEE---
Confidence 9999999999887 3445554 3667788888864100 00000 000111122222222221
Q ss_pred CCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeec-ccC
Q psy4579 276 TDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRG-HQK 354 (368)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~g-h~~ 354 (368)
...+.+.+|+..+++....+..+|...|.+++|+|++..+|++|+.||.|++||++.. ..++..+.+ |..
T Consensus 266 ~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~---------~~~~~~~~~~~~~ 336 (420)
T 3vl1_A 266 HVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSP---------ECPVGEFLINEGT 336 (420)
T ss_dssp ETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCT---------TSCSEEEEESTTS
T ss_pred cCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCC---------cCchhhhhccCCC
Confidence 1345577888888887777776799999999999999658999999999999999852 133456665 677
Q ss_pred ceeeeccee
Q psy4579 355 EGLIEGTYN 363 (368)
Q Consensus 355 ~V~~l~w~p 363 (368)
.|.++.|.+
T Consensus 337 ~v~~~~~~~ 345 (420)
T 3vl1_A 337 PINNVYFAA 345 (420)
T ss_dssp CEEEEEEET
T ss_pred CceEEEeCC
Confidence 888887654
|
| >2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.97 E-value=4e-30 Score=230.07 Aligned_cols=258 Identities=17% Similarity=0.201 Sum_probs=187.6
Q ss_pred hhhhhhhhhcCcchheeecccccccCceeeEecCCcccccCCCCccccccCcceeeeccccC----C-CCCcEEEEEEec
Q psy4579 17 NEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTS----D-EQNHLLIASVQL 91 (368)
Q Consensus 17 ~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~i~~~~~ 91 (368)
+...++|+..+......+..+ .-++.+++|+|++..+++++.|+.+.+|........... . ......|..+.|
T Consensus 85 Dg~v~vWd~~~~~~~~~~~~~--~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 162 (354)
T 2pbi_B 85 DGKVIVWDSFTTNKEHAVTMP--CTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSF 162 (354)
T ss_dssp TSEEEEEETTTCCEEEEEECS--SSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEE
T ss_pred CCeEEEEECCCCCcceEEecC--CCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccccceeeeccCCcEEEEEE
Confidence 456778887665444333322 346889999999999999999999976654322110000 0 011234667777
Q ss_pred CCCccccccCCcccCCCCcccCCCCCe-eeeeccccCCCCceeeEecCC--CCCeeEEEeCCCcEEEEeCCCCCCCCccc
Q psy4579 92 PNEDAQFDASNYDTDKGGNVQLPNEDA-QFDASNYDTDKGGYGLSWNPS--LNGYLLSASDDHTICLWDINATPKENRVI 168 (368)
Q Consensus 92 ~~~~~~~~~~~~~~~~~g~i~i~~~~~-~~~~~~~~h~~~v~~l~~sp~--~~~~lasg~~dg~v~iwd~~~~~~~~~~~ 168 (368)
.+.+..+..+ +.||+|++|+... +....+.+|...|.+++|+|+ + +.|++|+.||+|++||++++.
T Consensus 163 ~~~~~~l~t~----s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g-~~l~sgs~Dg~v~~wd~~~~~------ 231 (354)
T 2pbi_B 163 TNSDMQILTA----SGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETG-NTFVSGGCDKKAMVWDMRSGQ------ 231 (354)
T ss_dssp CSSSSEEEEE----ETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSC-CEEEEEETTSCEEEEETTTCC------
T ss_pred eCCCCEEEEE----eCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCC-CEEEEEeCCCeEEEEECCCCc------
Confidence 6655444433 3689999999864 556677889999999999885 4 799999999999999998874
Q ss_pred ccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeec--ccccEeEEEEee--ecc
Q psy4579 169 DAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTG--HTAVVEDYSIHR--LIL 244 (368)
Q Consensus 169 ~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~--~~~~v~~v~~~~--~~~ 244 (368)
+...+.+|...|. +++|+|+ +.+|++|+.|++|++||++... ....+.. +...+.+++|++ ..+
T Consensus 232 -~~~~~~~h~~~v~---~v~~~p~-~~~l~s~s~D~~v~lwd~~~~~-------~~~~~~~~~~~~~~~~~~~s~~g~~l 299 (354)
T 2pbi_B 232 -CVQAFETHESDVN---SVRYYPS-GDAFASGSDDATCRLYDLRADR-------EVAIYSKESIIFGASSVDFSLSGRLL 299 (354)
T ss_dssp -EEEEECCCSSCEE---EEEECTT-SSEEEEEETTSCEEEEETTTTE-------EEEEECCTTCCSCEEEEEECTTSSEE
T ss_pred -EEEEecCCCCCeE---EEEEeCC-CCEEEEEeCCCeEEEEECCCCc-------EEEEEcCCCcccceeEEEEeCCCCEE
Confidence 5678899999996 9999998 8999999999999999998762 2333332 334678888875 233
Q ss_pred cccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCe
Q psy4579 245 GTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSD 324 (368)
Q Consensus 245 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~ 324 (368)
.+++.|+. +.+|+..+++....+. +|.+.|++++|+|++ .+|+||+.||+
T Consensus 300 ~~g~~d~~----------------------------i~vwd~~~~~~~~~l~-~h~~~v~~l~~spdg-~~l~sgs~D~~ 349 (354)
T 2pbi_B 300 FAGYNDYT----------------------------INVWDVLKGSRVSILF-GHENRVSTLRVSPDG-TAFCSGSWDHT 349 (354)
T ss_dssp EEEETTSC----------------------------EEEEETTTCSEEEEEC-CCSSCEEEEEECTTS-SCEEEEETTSE
T ss_pred EEEECCCc----------------------------EEEEECCCCceEEEEE-CCCCcEEEEEECCCC-CEEEEEcCCCC
Confidence 33333333 4444444555555554 899999999999999 67889999999
Q ss_pred EEEEE
Q psy4579 325 VLVFD 329 (368)
Q Consensus 325 i~iwd 329 (368)
|++|+
T Consensus 350 v~vW~ 354 (354)
T 2pbi_B 350 LRVWA 354 (354)
T ss_dssp EEEEC
T ss_pred EEecC
Confidence 99996
|
| >2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.97 E-value=3e-31 Score=248.00 Aligned_cols=273 Identities=4% Similarity=-0.043 Sum_probs=180.2
Q ss_pred cccCceeeEecCCc---------ccccC-------------------CCCccccccCcceeeecccc----CC-CCCcEE
Q psy4579 39 LEWPSLTAQWLPDV---------TSVQL-------------------PNEDAQFDASNYDTDKGTHT----SD-EQNHLL 85 (368)
Q Consensus 39 ~~~~~~~~~~~p~~---------~~l~~-------------------~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~ 85 (368)
+..+|.+++|+|++ ++||+ ++.|+.+++|+... +... .. ......
T Consensus 132 ~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~--~~~~~~~~~~l~~~~~~ 209 (524)
T 2j04_B 132 VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNT--STLHCVKVQTIVHSFGE 209 (524)
T ss_dssp CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEET--TTCCEEEEEEEEECCCS
T ss_pred CCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccC--CCCCceEEEEEEecCCc
Confidence 57899999999986 55554 66778887776433 2211 00 011123
Q ss_pred EEEEecCCC-----ccccccCCcccCCCCcccCCCCCeee------------eeccccCCCCceeeEecCCCCCeeEEEe
Q psy4579 86 IASVQLPNE-----DAQFDASNYDTDKGGNVQLPNEDAQF------------DASNYDTDKGGYGLSWNPSLNGYLLSAS 148 (368)
Q Consensus 86 i~~~~~~~~-----~~~~~~~~~~~~~~g~i~i~~~~~~~------------~~~~~~h~~~v~~l~~sp~~~~~lasg~ 148 (368)
|..+.|.+. +..+.+++ +.||+|++|++.... ...+.+|...|++++|+|+ ..||+|+
T Consensus 210 V~~v~wsp~~~~~~~~~~LAs~---s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~--~~lasgs 284 (524)
T 2j04_B 210 VWDLKWHEGCHAPHLVGCLSFV---SQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP--TTVVCGF 284 (524)
T ss_dssp EEEEEECSSCCCSSSSCEEEEE---ETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS--SEEEEEE
T ss_pred EEEEEECCCCCCCCCCceEEEE---ecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC--CeEEEEe
Confidence 667777543 12334433 459999999986431 1245679999999999985 5899999
Q ss_pred CCCcEEEEeCCCCCCCCcccccceeeeccccceecceee--EEeCCCC-CeEEEeeCCCcEEEEECCCCCCCCcccccee
Q psy4579 149 DDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGL--SWNPSLN-GYLLSASDDHTICLWDINATPKENRVIDAKT 225 (368)
Q Consensus 149 ~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i--~~~p~~~-~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~ 225 (368)
.||+|++||++++.. +...+.+|...|. ++ +|+|+ + .+|||||.|++|+|||++++ .+..
T Consensus 285 ~DgtV~lWD~~~~~~------~~~~~~~H~~~V~---sv~~~~s~~-g~~~laS~S~D~tvklWD~~~~-------~~~~ 347 (524)
T 2j04_B 285 KNGFVAEFDLTDPEV------PSFYDQVHDSYIL---SVSTAYSDF-EDTVVSTVAVDGYFYIFNPKDI-------ATTK 347 (524)
T ss_dssp TTSEEEEEETTBCSS------CSEEEECSSSCEE---EEEEECCTT-SCCEEEEEETTSEEEEECGGGH-------HHHC
T ss_pred CCCEEEEEECCCCCC------ceEEeecccccEE---EEEEEcCCC-CCeEEEEeccCCeEEEEECCCC-------Cccc
Confidence 999999999986532 4567899999996 88 56776 6 89999999999999999876 3345
Q ss_pred eeecccc--cEeEEEEeee--cccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCccc
Q psy4579 226 IFTGHTA--VVEDYSIHRL--ILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEG 301 (368)
Q Consensus 226 ~~~~~~~--~v~~v~~~~~--~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~ 301 (368)
.+.+|.. .|.+++|+|. .+++++.|+.+++ |+.+++.....+. +|.+
T Consensus 348 ~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~l----------------------------wd~~~~~~~~~l~-gH~~ 398 (524)
T 2j04_B 348 TTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRA----------------------------VPSRAAFAVHPLV-SRET 398 (524)
T ss_dssp EEEEECSCCSCCCEEEETTTTEEEEECSSSEEEE----------------------------EETTCTTCCEEEE-ECSS
T ss_pred ccccccccCcccceEeCCCcCeEEEeCCCCcEEE----------------------------EECcccccceeee-cCCC
Confidence 5666653 4788999872 3444444443333 3333444444455 7999
Q ss_pred ceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCC------------------CCCC----------------CCCCce
Q psy4579 302 EVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKP------------------DPNG----------------ECHPDL 347 (368)
Q Consensus 302 ~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~------------------~~~~----------------~~~~~~ 347 (368)
.|++++|+|++ .+|++|+.||+|++||+....... .+.+ ......
T Consensus 399 ~V~sva~Sp~g-~~l~Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~ 477 (524)
T 2j04_B 399 TITAIGVSRLH-PMVLAGSADGSLIITNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKA 477 (524)
T ss_dssp CEEEEECCSSC-CBCEEEETTTEEECCBSCSSTTTCC------CCCCEEEECBCCSSSCEEEECCCCCCCC---------
T ss_pred ceEEEEeCCCC-CeEEEEECCCEEEEEechHhhccccccCccceeeeEEEEeccCCCCCeEEccCCceecccccCCccee
Confidence 99999999999 577899999999999965321110 0001 022334
Q ss_pred eeecccCceeeecceeee
Q psy4579 348 RLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 348 ~~~gh~~~V~~l~w~p~~ 365 (368)
.+.+|...|++|+|||+.
T Consensus 478 ~l~gh~~~V~~Vafsp~~ 495 (524)
T 2j04_B 478 KIDAHGINITCTKWNETS 495 (524)
T ss_dssp ----CCCSCCCEEECCST
T ss_pred eecCCCceEEEEECCCCC
Confidence 677899999999999984
|
| >3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A | Back alignment and structure |
|---|
Probab=99.97 E-value=9.7e-31 Score=230.42 Aligned_cols=253 Identities=15% Similarity=0.123 Sum_probs=180.2
Q ss_pred ccccCceeeEecCCcccccCCCCccccccCcceeeeccccCCC-CCcEEEEEEecCC-CccccccCCcccCCCCcccCCC
Q psy4579 38 ALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDE-QNHLLIASVQLPN-EDAQFDASNYDTDKGGNVQLPN 115 (368)
Q Consensus 38 ~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~-~~~~~~~~~~~~~~~g~i~i~~ 115 (368)
.+.-+|.+++|+|++++|++|+.|+.+++|+............ .....|.++.|.+ .+....+++ +.||+|++|+
T Consensus 11 ~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~---s~D~~v~iWd 87 (316)
T 3bg1_A 11 SHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASC---SYDRKVIIWR 87 (316)
T ss_dssp ---CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEE---ETTSCEEEEC
T ss_pred cccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEE---ECCCEEEEEE
Confidence 3566899999999999999999999997775432211111111 1223477788743 223333333 4699999999
Q ss_pred CCee---eeeccccCCCCceeeEecCC--CCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEe
Q psy4579 116 EDAQ---FDASNYDTDKGGYGLSWNPS--LNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWN 190 (368)
Q Consensus 116 ~~~~---~~~~~~~h~~~v~~l~~sp~--~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~ 190 (368)
.... ....+.+|...|++++|+|+ + .+|++|+.||+|++||++.... ......+.+|...+. +++|+
T Consensus 88 ~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g-~~lasgs~D~~i~lwd~~~~~~----~~~~~~~~~h~~~v~---~~~~~ 159 (316)
T 3bg1_A 88 EENGTWEKSHEHAGHDSSVNSVCWAPHDYG-LILACGSSDGAISLLTYTGEGQ----WEVKKINNAHTIGCN---AVSWA 159 (316)
T ss_dssp CSSSCCCEEEEECCCSSCCCEEEECCTTTC-SCEEEECSSSCEEEEEECSSSC----EEECCBTTSSSSCBC---CCEEC
T ss_pred CCCCcceEEEEccCCCCceEEEEECCCCCC-cEEEEEcCCCCEEEEecCCCCC----cceeeeeccccCCcc---eEEEc
Confidence 8752 34556789999999999998 5 7999999999999999986521 012345678988886 99999
Q ss_pred CCC----------------CCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeee------cccccC
Q psy4579 191 PSL----------------NGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRL------ILGTHT 248 (368)
Q Consensus 191 p~~----------------~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~------~~~~~~ 248 (368)
|+. +.+|++|+.|++|++||++.... +.+...+.+|...|++++|+|. .+++++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~----~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s 235 (316)
T 3bg1_A 160 PAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQ----WKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCS 235 (316)
T ss_dssp CCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSC----EEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEE
T ss_pred cccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCc----cceeeecccCCCceEEEEecCCCCCCCceEEEEc
Confidence 962 36899999999999999965321 1245678899999999999873 477777
Q ss_pred CCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEE
Q psy4579 249 SDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVF 328 (368)
Q Consensus 249 ~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iw 328 (368)
.|+.+++|..... . .+.........|...|.+++|+|++ .+||+|+.||+|++|
T Consensus 236 ~D~~v~iw~~~~~---------------~----------~~~~~~~~~~~~~~~v~~v~~sp~g-~~las~~~D~~v~lw 289 (316)
T 3bg1_A 236 QDGRVFIWTCDDA---------------S----------SNTWSPKLLHKFNDVVWHVSWSITA-NILAVSGGDNKVTLW 289 (316)
T ss_dssp TTCEEEEEECSST---------------T----------CCCCBCCEEEECSSCEEEEEECTTT-CCEEEEESSSCEEEE
T ss_pred CCCeEEEEEccCc---------------c----------ccchhhhhhhcCCCcEEEEEEcCCC-CEEEEEcCCCeEEEE
Confidence 7777776642200 0 0000111122688999999999999 688899999999999
Q ss_pred ECC
Q psy4579 329 DYT 331 (368)
Q Consensus 329 d~~ 331 (368)
+..
T Consensus 290 ~~~ 292 (316)
T 3bg1_A 290 KES 292 (316)
T ss_dssp EEC
T ss_pred EEC
Confidence 986
|
| >3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.5e-29 Score=221.64 Aligned_cols=217 Identities=18% Similarity=0.196 Sum_probs=170.4
Q ss_pred EEEEEecCCCccccccCCcccCCCCcccCCCCCe------eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeC
Q psy4579 85 LIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDA------QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDI 158 (368)
Q Consensus 85 ~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~------~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~ 158 (368)
.|.++.+.+....+.+++ +.||+|++|+... .....+.+|...|.+++|+|++ .+|++|+.|++|++||+
T Consensus 19 ~V~~l~~~~~~~~~l~s~---s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg-~~l~s~s~D~~v~~wd~ 94 (319)
T 3frx_A 19 WVTSLATSAGQPNLLLSA---SRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADG-AYALSASWDKTLRLWDV 94 (319)
T ss_dssp CEEEEEECSSCTTEEEEE---ETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTS-SEEEEEETTSEEEEEET
T ss_pred eEEEEEccCCCccEEEEe---cCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCC-CEEEEEeCCCEEEEEEC
Confidence 467777755443333333 4699999998753 2345678899999999999999 99999999999999999
Q ss_pred CCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEE
Q psy4579 159 NATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYS 238 (368)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~ 238 (368)
.++. ....+.+|...|. +++|+|+ +.+|++|+.|++|++||++.. ++..+.+|...|.++.
T Consensus 95 ~~~~-------~~~~~~~h~~~v~---~~~~~~~-~~~l~s~s~D~~i~vwd~~~~--------~~~~~~~h~~~v~~~~ 155 (319)
T 3frx_A 95 ATGE-------TYQRFVGHKSDVM---SVDIDKK-ASMIISGSRDKTIKVWTIKGQ--------CLATLLGHNDWVSQVR 155 (319)
T ss_dssp TTTE-------EEEEEECCSSCEE---EEEECTT-SCEEEEEETTSCEEEEETTSC--------EEEEECCCSSCEEEEE
T ss_pred CCCC-------eeEEEccCCCcEE---EEEEcCC-CCEEEEEeCCCeEEEEECCCC--------eEEEEeccCCcEEEEE
Confidence 8874 5678899999996 9999998 999999999999999999753 4677888999999999
Q ss_pred Eeee--------cccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeC
Q psy4579 239 IHRL--------ILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMP 310 (368)
Q Consensus 239 ~~~~--------~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p 310 (368)
|.|. .+.+++.| +.+.+|+..+++....+. +|...|++++|+|
T Consensus 156 ~~~~~~~~~~~~~l~s~~~d----------------------------~~i~~wd~~~~~~~~~~~-~h~~~v~~~~~sp 206 (319)
T 3frx_A 156 VVPNEKADDDSVTIISAGND----------------------------KMVKAWNLNQFQIEADFI-GHNSNINTLTASP 206 (319)
T ss_dssp ECCC------CCEEEEEETT----------------------------SCEEEEETTTTEEEEEEC-CCCSCEEEEEECT
T ss_pred EccCCCCCCCccEEEEEeCC----------------------------CEEEEEECCcchhheeec-CCCCcEEEEEEcC
Confidence 9763 23333333 334455555566555555 8999999999999
Q ss_pred CCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeecccCceeeecceeee
Q psy4579 311 QNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 311 ~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p~~ 365 (368)
++ .+|++|+.||+|++||++. ...+..+. +...|.+++|+|+.
T Consensus 207 ~g-~~l~s~~~dg~i~iwd~~~----------~~~~~~~~-~~~~v~~~~~sp~~ 249 (319)
T 3frx_A 207 DG-TLIASAGKDGEIMLWNLAA----------KKAMYTLS-AQDEVFSLAFSPNR 249 (319)
T ss_dssp TS-SEEEEEETTCEEEEEETTT----------TEEEEEEE-CCSCEEEEEECSSS
T ss_pred CC-CEEEEEeCCCeEEEEECCC----------CcEEEEec-CCCcEEEEEEcCCC
Confidence 99 6888999999999999975 33344454 45689999999975
|
| >2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R | Back alignment and structure |
|---|
Probab=99.97 E-value=3.1e-29 Score=223.39 Aligned_cols=275 Identities=15% Similarity=0.147 Sum_probs=188.1
Q ss_pred cccCceeeEe-----cC-CcccccCCCCccccccCcceeee-----ccccCC-CCCcEEEEEEecCCCccccccCCcccC
Q psy4579 39 LEWPSLTAQW-----LP-DVTSVQLPNEDAQFDASNYDTDK-----GTHTSD-EQNHLLIASVQLPNEDAQFDASNYDTD 106 (368)
Q Consensus 39 ~~~~~~~~~~-----~p-~~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~ 106 (368)
+.-+|.+++| +| ++++|++|+.|+.+++|+..... +..... ......|.++.+.+.+..+. ++ +
T Consensus 20 H~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~-s~---s 95 (343)
T 2xzm_R 20 HSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAI-SS---S 95 (343)
T ss_dssp CSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEE-EE---E
T ss_pred chhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEE-EE---c
Confidence 4568999999 76 99999999999999777653211 111111 11223477777765443332 22 4
Q ss_pred CCCcccCCCCCe-eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecce
Q psy4579 107 KGGNVQLPNEDA-QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRY 185 (368)
Q Consensus 107 ~~g~i~i~~~~~-~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 185 (368)
.||+|++|+... +....+.+|...|++++|+|++ ++|++|+.|++|++||+..... .......+|...+.
T Consensus 96 ~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~-~~l~s~~~d~~i~~wd~~~~~~-----~~~~~~~~~~~~v~--- 166 (343)
T 2xzm_R 96 WDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDN-RQILSAGAEREIKLWNILGECK-----FSSAEKENHSDWVS--- 166 (343)
T ss_dssp TTSEEEEEETTSSCEEEEEECCCSCEEEEEECSST-TEEEEEETTSCEEEEESSSCEE-----EECCTTTSCSSCEE---
T ss_pred CCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCC-CEEEEEcCCCEEEEEeccCCce-----eeeecccCCCceee---
Confidence 699999999864 5566778899999999999998 8999999999999999974310 00111236888886
Q ss_pred eeEEeCCC---------CCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee--ecccccCCCCccc
Q psy4579 186 GLSWNPSL---------NGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LILGTHTSDEQNH 254 (368)
Q Consensus 186 ~i~~~p~~---------~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~d~~~~ 254 (368)
+++|+|+. +.+|++++.||.|++||.+. .....+.+|...|.+++|+| ..+++++.|+.++
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~--------~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~ 238 (343)
T 2xzm_R 167 CVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNF--------QIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLL 238 (343)
T ss_dssp EEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTT--------EEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEE
T ss_pred eeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCC--------ceeEEEcCccccceEEEECCCCCEEEEEcCCCeEE
Confidence 99999973 16899999999999999433 34567888999999999986 4566666666666
Q ss_pred eEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCC
Q psy4579 255 LLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHP 334 (368)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~ 334 (368)
+|... ........+ .+...|.+++|+|++ .++++ +.|+.|++||+....
T Consensus 239 iwd~~---------------------------~~~~~~~~~--~~~~~v~~v~~sp~~-~~la~-~~d~~v~iw~~~~~~ 287 (343)
T 2xzm_R 239 IWDIL---------------------------NLTYPQREF--DAGSTINQIAFNPKL-QWVAV-GTDQGVKIFNLMTQS 287 (343)
T ss_dssp EEESS---------------------------CCSSCSEEE--ECSSCEEEEEECSSS-CEEEE-EESSCEEEEESSSCC
T ss_pred EEECC---------------------------CCcccceee--cCCCcEEEEEECCCC-CEEEE-ECCCCEEEEEeCCCC
Confidence 55321 001111112 355679999999998 56754 568899999997532
Q ss_pred CCCCCCCCCCC---ceeeecccCceeeecceeee
Q psy4579 335 SKPDPNGECHP---DLRLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 335 ~~~~~~~~~~~---~~~~~gh~~~V~~l~w~p~~ 365 (368)
......-...+ .....+|...|++++|+|+.
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g 321 (343)
T 2xzm_R 288 KAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALG 321 (343)
T ss_dssp SCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSS
T ss_pred CCceEEeecCcchhhhhhcCCCCceEEEEECCCC
Confidence 21100000000 01123799999999999975
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-28 Score=217.74 Aligned_cols=289 Identities=12% Similarity=0.078 Sum_probs=208.4
Q ss_pred cccccCceeeEecCCcccccCCCCccccccCcceeeeccccCCCCCcEEEEEEecCCCccccccCCcccCCCCcccCCCC
Q psy4579 37 HALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNE 116 (368)
Q Consensus 37 ~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~ 116 (368)
+...-++.+++|+|||+.++++..++.+..+...... ...........|.++.+.+.+..+.+.. ||.|++|+.
T Consensus 6 ~~~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~-~~~~~~~h~~~v~~~~~~~~~~~l~~~~-----dg~i~iw~~ 79 (337)
T 1gxr_A 6 AMGSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHA-RQINTLNHGEVVCAVTISNPTRHVYTGG-----KGCVKVWDI 79 (337)
T ss_dssp EEEEEECCEEEECSSSCEEECCCCTTSSSSTTCCSEE-EEEEEECCSSCCCEEEECSSSSEEEEEC-----BSEEEEEET
T ss_pred cccCCceeEEEECCCCCEEEeecCCCcEeccccCCcc-ccceeccCCCceEEEEEecCCcEEEEcC-----CCeEEEEEC
Confidence 3445588999999999999988877766444322211 1111112223466777765554444332 799999998
Q ss_pred Ceee------eeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEe
Q psy4579 117 DAQF------DASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWN 190 (368)
Q Consensus 117 ~~~~------~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~ 190 (368)
+... .....+|...|.+++|+|++ ++|++++.||.|++||+.++.. .....+.+|...+. +++|+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~~~d~~~~~~-----~~~~~~~~~~~~i~---~~~~~ 150 (337)
T 1gxr_A 80 SHPGNKSPVSQLDCLNRDNYIRSCKLLPDG-CTLIVGGEASTLSIWDLAAPTP-----RIKAELTSSAPACY---ALAIS 150 (337)
T ss_dssp TSTTCCSCSEEEECSCTTSBEEEEEECTTS-SEEEEEESSSEEEEEECCCC-------EEEEEEECSSSCEE---EEEEC
T ss_pred CCCCceeeeecccccCCCCcEEEEEEcCCC-CEEEEEcCCCcEEEEECCCCCc-----ceeeecccCCCceE---EEEEC
Confidence 6422 11223799999999999998 8999999999999999987642 13466788988886 99999
Q ss_pred CCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee--ecccccCCCCccceEEE----------
Q psy4579 191 PSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LILGTHTSDEQNHLLIA---------- 258 (368)
Q Consensus 191 p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~d~~~~~~~~---------- 258 (368)
|+ +.++++++.||.|++||++++ .+...+.+|...+.+++|++ ..+.+++.++.+++|..
T Consensus 151 ~~-~~~l~~~~~dg~v~~~d~~~~-------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~ 222 (337)
T 1gxr_A 151 PD-SKVCFSCCSDGNIAVWDLHNQ-------TLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD 222 (337)
T ss_dssp TT-SSEEEEEETTSCEEEEETTTT-------EEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred CC-CCEEEEEeCCCcEEEEeCCCC-------ceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeec
Confidence 98 899999999999999999886 45677888999999999985 46667777777777631
Q ss_pred ------EeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCC
Q psy4579 259 ------SVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 259 ------~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
.+.+.++...+.+. ...+.+.+|+...++.. .+ ..|...|.+++|+|++ .+|++++.||.|++||++.
T Consensus 223 ~~~~v~~~~~s~~~~~l~~~---~~~~~i~~~~~~~~~~~-~~-~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~~~~~~ 296 (337)
T 1gxr_A 223 FTSQIFSLGYCPTGEWLAVG---MESSNVEVLHVNKPDKY-QL-HLHESCVLSLKFAYCG-KWFVSTGKDNLLNAWRTPY 296 (337)
T ss_dssp CSSCEEEEEECTTSSEEEEE---ETTSCEEEEETTSSCEE-EE-CCCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTT
T ss_pred CCCceEEEEECCCCCEEEEE---cCCCcEEEEECCCCCeE-EE-cCCccceeEEEECCCC-CEEEEecCCCcEEEEECCC
Confidence 22233333222222 23456777888777643 33 3799999999999999 6788999999999999975
Q ss_pred CCCCCCCCCCCCCceeeecccCceeeecceeee
Q psy4579 333 HPSKPDPNGECHPDLRLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p~~ 365 (368)
... .....|...|.+++|+|+.
T Consensus 297 ----------~~~-~~~~~~~~~v~~~~~s~~~ 318 (337)
T 1gxr_A 297 ----------GAS-IFQSKESSSVLSCDISVDD 318 (337)
T ss_dssp ----------CCE-EEEEECSSCEEEEEECTTS
T ss_pred ----------CeE-EEEecCCCcEEEEEECCCC
Confidence 222 2345789999999999875
|
| >2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.7e-28 Score=214.12 Aligned_cols=228 Identities=14% Similarity=0.167 Sum_probs=168.9
Q ss_pred EEEEEecCCCccccccCCcccCCCCcccCCCCCe---eeeeccccCCCCceeeEecCC--CCCeeEEEeCCCcEEEEeCC
Q psy4579 85 LIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDA---QFDASNYDTDKGGYGLSWNPS--LNGYLLSASDDHTICLWDIN 159 (368)
Q Consensus 85 ~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~---~~~~~~~~h~~~v~~l~~sp~--~~~~lasg~~dg~v~iwd~~ 159 (368)
.|.++.|.+.+..+..+ +.||+|++|+.++ +....+.+|.++|++++|+|. + ++||+|+.||+|++||++
T Consensus 11 ~V~~~~~s~~g~~las~----s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g-~~l~s~s~D~~v~iWd~~ 85 (297)
T 2pm7_B 11 MIHDAVMDYYGKRMATC----SSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFG-TILASCSYDGKVMIWKEE 85 (297)
T ss_dssp CEEEEEECTTSSEEEEE----ETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGC-SEEEEEETTTEEEEEEBS
T ss_pred ceEEEEECCCCCEEEEE----eCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcC-CEEEEEcCCCEEEEEEcC
Confidence 47777786655444333 3689999999853 455677899999999999864 6 899999999999999998
Q ss_pred CCCCCCcccccceeeeccccceecceeeEEeCCC-CCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEE
Q psy4579 160 ATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSL-NGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYS 238 (368)
Q Consensus 160 ~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~-~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~ 238 (368)
++.. .....+.+|...|. +++|+|+. +.+|++|+.|++|++||++..... ....+.+|...|++++
T Consensus 86 ~~~~-----~~~~~~~~h~~~v~---~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~-----~~~~~~~h~~~v~~~~ 152 (297)
T 2pm7_B 86 NGRW-----SQIAVHAVHSASVN---SVQWAPHEYGPMLLVASSDGKVSVVEFKENGTT-----SPIIIDAHAIGVNSAS 152 (297)
T ss_dssp SSCB-----CCCEEECCCSSCEE---EEEECCGGGCSEEEEEETTSEEEEEEBCSSSCB-----CCEEEECCSSCEEEEE
T ss_pred CCce-----EEEEEeecCCCcee---EEEeCcCCCCcEEEEEECCCcEEEEEecCCCce-----eeeeeecccCccceEe
Confidence 7532 13467788999996 99999963 679999999999999999875321 1346778999999999
Q ss_pred Eeee---------------cccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCc----eeeeeecCc
Q psy4579 239 IHRL---------------ILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGK----IEIEIKINH 299 (368)
Q Consensus 239 ~~~~---------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~----~~~~~~~~h 299 (368)
|+|. .+++++.|+.+++|. ..++. ....+. +|
T Consensus 153 ~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd----------------------------~~~~~~~~~~~~~l~-~H 203 (297)
T 2pm7_B 153 WAPATIEEDGEHNGTKESRKFVTGGADNLVKIWK----------------------------YNSDAQTYVLESTLE-GH 203 (297)
T ss_dssp ECCCC------------CCEEEEEETTSCEEEEE----------------------------EETTTTEEEEEEEEC-CC
T ss_pred ecCCcccccccCCCCCCcceEEEEcCCCcEEEEE----------------------------EcCCCceEEEEEEec-CC
Confidence 9874 344555555444443 32332 223333 89
Q ss_pred ccceeEEEEeCCC--CcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceee--ecccCceeeecceeeee
Q psy4579 300 EGEVNRARYMPQN--PCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRL--RGHQKEGLIEGTYNCYL 366 (368)
Q Consensus 300 ~~~i~~~~~~p~~--~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~--~gh~~~V~~l~w~p~~~ 366 (368)
...|.+++|+|++ ..+||||+.|++|++||++... +. .....+ .+|...|++++|+|+..
T Consensus 204 ~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~------~~-~~~~~~~~~~~~~~v~~~~~s~~g~ 267 (297)
T 2pm7_B 204 SDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQ------GP-WKKTLLKEEKFPDVLWRASWSLSGN 267 (297)
T ss_dssp SSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTT------SC-CEEEESSSSCCSSCEEEEEECSSSC
T ss_pred CCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCC------Cc-cceeeeecccCCCcEEEEEECCCCC
Confidence 9999999999985 4789999999999999997521 00 011122 57899999999999753
|
| >4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A | Back alignment and structure |
|---|
Probab=99.96 E-value=2.4e-29 Score=225.85 Aligned_cols=273 Identities=9% Similarity=-0.007 Sum_probs=171.1
Q ss_pred ccccccCceeeEecCCcccccCCCCcc-------ccccCcceeeeccccC--------C-CCCcEEEEEEecCCCccccc
Q psy4579 36 THALEWPSLTAQWLPDVTSVQLPNEDA-------QFDASNYDTDKGTHTS--------D-EQNHLLIASVQLPNEDAQFD 99 (368)
Q Consensus 36 ~~~~~~~~~~~~~~p~~~~l~~~~~~~-------~~~~~~~~~~~~~~~~--------~-~~~~~~i~~~~~~~~~~~~~ 99 (368)
.+++..||.|++|+||++.|++|+.+. .+++|..+........ . ..+...+.++.+.. +..+.
T Consensus 10 ~~~~g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~~-~~~~~ 88 (365)
T 4h5i_A 10 SYNVGYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDASK-GIILV 88 (365)
T ss_dssp EEECSSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEET-TEEEE
T ss_pred ecCCCCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeCC-CEEEE
Confidence 355788999999999999999986544 3544443221110000 0 00011122222211 10000
Q ss_pred cC------CcccCCCCcccCCCCCee-----ee-----eccccCCCCceeeEecCCCCCeeEE--EeCCCcEEEEeCCCC
Q psy4579 100 AS------NYDTDKGGNVQLPNEDAQ-----FD-----ASNYDTDKGGYGLSWNPSLNGYLLS--ASDDHTICLWDINAT 161 (368)
Q Consensus 100 ~~------~~~~~~~g~i~i~~~~~~-----~~-----~~~~~h~~~v~~l~~sp~~~~~las--g~~dg~v~iwd~~~~ 161 (368)
+. -+....|+.+++|+.+.. .. .....+...+.+++|+|+| +++|+ ++.|++|+|||++++
T Consensus 89 g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg-~~la~as~~~d~~i~iwd~~~~ 167 (365)
T 4h5i_A 89 GCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREG-TVAAIASSKVPAIMRIIDPSDL 167 (365)
T ss_dssp ECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTS-SCEEEEESCSSCEEEEEETTTT
T ss_pred EECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCC-CEEEEEECCCCCEEEEeECCCC
Confidence 00 011245788999875421 11 1123355678999999999 87664 557999999999886
Q ss_pred CCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee
Q psy4579 162 PKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR 241 (368)
Q Consensus 162 ~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~ 241 (368)
. +...+. |.+.|. +++|+|+ +.++++++.| .+++|+..++.. .......+|...|.+++|+|
T Consensus 168 ~-------~~~~~~-~~~~V~---~v~fspd-g~~l~s~s~~-~~~~~~~~~~~~-----~~~~~~~~~~~~v~~v~fsp 229 (365)
T 4h5i_A 168 T-------EKFEIE-TRGEVK---DLHFSTD-GKVVAYITGS-SLEVISTVTGSC-----IARKTDFDKNWSLSKINFIA 229 (365)
T ss_dssp E-------EEEEEE-CSSCCC---EEEECTT-SSEEEEECSS-CEEEEETTTCCE-----EEEECCCCTTEEEEEEEEEE
T ss_pred c-------EEEEeC-CCCceE---EEEEccC-CceEEeccce-eEEEEEeccCcc-----eeeeecCCCCCCEEEEEEcC
Confidence 4 344454 777885 9999999 9999999855 566666666532 11234456888999999987
Q ss_pred --ecccccCCCCcc--ceEEEEeecCCcccccccccccCCCCCcccccCCCCce---eeeeecCcccceeEEEEeCCCCc
Q psy4579 242 --LILGTHTSDEQN--HLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKI---EIEIKINHEGEVNRARYMPQNPC 314 (368)
Q Consensus 242 --~~~~~~~~d~~~--~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~---~~~~~~~h~~~i~~~~~~p~~~~ 314 (368)
..+.+++.++.. .++.+.. ..... ......+|...|++++|+|++ .
T Consensus 230 dg~~l~~~s~d~~~~~~i~~~~~--------------------------~~~~~~~~~~~~~~~~~~~V~~~~~Spdg-~ 282 (365)
T 4h5i_A 230 DDTVLIAASLKKGKGIVLTKISI--------------------------KSGNTSVLRSKQVTNRFKGITSMDVDMKG-E 282 (365)
T ss_dssp TTEEEEEEEESSSCCEEEEEEEE--------------------------ETTEEEEEEEEEEESSCSCEEEEEECTTS-C
T ss_pred CCCEEEEEecCCcceeEEeeccc--------------------------ccceecceeeeeecCCCCCeEeEEECCCC-C
Confidence 233333333222 2222221 11111 111223799999999999999 7
Q ss_pred EEEEecCCCeEEEEECCCCCCCCCCCCCCCCcee-eecccCceeeecceeee
Q psy4579 315 VIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLR-LRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 315 ~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~-~~gh~~~V~~l~w~p~~ 365 (368)
+||+|+.|++|+|||++. ..++.. +.+|.+.|++|+|+|+.
T Consensus 283 ~lasgs~D~~V~iwd~~~----------~~~~~~~~~gH~~~V~~v~fSpdg 324 (365)
T 4h5i_A 283 LAVLASNDNSIALVKLKD----------LSMSKIFKQAHSFAITEVTISPDS 324 (365)
T ss_dssp EEEEEETTSCEEEEETTT----------TEEEEEETTSSSSCEEEEEECTTS
T ss_pred ceEEEcCCCEEEEEECCC----------CcEEEEecCcccCCEEEEEECCCC
Confidence 899999999999999975 344444 47999999999999975
|
| >3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* | Back alignment and structure |
|---|
Probab=99.96 E-value=4.3e-29 Score=225.63 Aligned_cols=288 Identities=14% Similarity=0.117 Sum_probs=205.5
Q ss_pred hhhhhcCcchheeecccccccCceeeEecCCc-ccccCCCCccccccCcceeeeccccCC-CCCcEEEEEEecCCCcccc
Q psy4579 21 KIWKKNTPFLYDLVMTHALEWPSLTAQWLPDV-TSVQLPNEDAQFDASNYDTDKGTHTSD-EQNHLLIASVQLPNEDAQF 98 (368)
Q Consensus 21 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~ 98 (368)
.+|......++..+.. +.-++.+++|+|++ ++|++|+.|+.+++|+........... ......|.++.|.+.+...
T Consensus 56 ~~~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 133 (383)
T 3ei3_B 56 FIRSLKSYKLHRTASP--FDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQ 133 (383)
T ss_dssp HHHHHTTCEEEEEECC--CSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEE
T ss_pred ccccccccceEEeccC--CCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCE
Confidence 3455555555554433 35689999999999 999999999999777655332222222 1234467888886633333
Q ss_pred ccCCcccCCCCcccCCCCCeeeeecccc---CCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeee
Q psy4579 99 DASNYDTDKGGNVQLPNEDAQFDASNYD---TDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFT 175 (368)
Q Consensus 99 ~~~~~~~~~~g~i~i~~~~~~~~~~~~~---h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~ 175 (368)
.+++ +.||.|++|+..+.....+.. |...|.+++|+|++ .+|++|+.||.|++||++.. +...+.
T Consensus 134 l~s~---~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~--------~~~~~~ 201 (383)
T 3ei3_B 134 LFVS---SIRGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSR-QMLATGDSTGRLLLLGLDGH--------EIFKEK 201 (383)
T ss_dssp EEEE---ETTTEEEEEETTSCEEEEEECCCCSSCCEEEEEEETTT-TEEEEEETTSEEEEEETTSC--------EEEEEE
T ss_pred EEEE---eCCCEEEEEECCCCceEEEeccCCCCCCeEEEEECCCC-CEEEEECCCCCEEEEECCCC--------EEEEec
Confidence 3332 358999999998765555544 45889999999998 89999999999999999532 567889
Q ss_pred ccccceecceeeEEeCCCCC-eEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee---ecccccCCCC
Q psy4579 176 GHTAVVEVRYGLSWNPSLNG-YLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR---LILGTHTSDE 251 (368)
Q Consensus 176 ~h~~~v~~~~~i~~~p~~~~-~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~---~~~~~~~~d~ 251 (368)
+|...|. +++|+|+ +. +|++|+.|+.|++||+++..... .++..+ +|...|.+++|++ ..+.+++.|+
T Consensus 202 ~h~~~v~---~~~~~~~-~~~~l~s~~~d~~i~iwd~~~~~~~~---~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~ 273 (383)
T 3ei3_B 202 LHKAKVT---HAEFNPR-CDWLMATSSVDATVKLWDLRNIKDKN---SYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRN 273 (383)
T ss_dssp CSSSCEE---EEEECSS-CTTEEEEEETTSEEEEEEGGGCCSTT---CEEEEE-ECSSCEEEEEECTTTSCEEEEEESSS
T ss_pred cCCCcEE---EEEECCC-CCCEEEEEeCCCEEEEEeCCCCCccc---ceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCC
Confidence 9999996 9999999 66 99999999999999998753322 233444 6999999999987 5777888888
Q ss_pred ccceEEEEeecCCc------------c----------ccccccccc-------CCCCCcccccCCCCceeeeeecC-ccc
Q psy4579 252 QNHLLIASVQLPNE------------D----------AQFDASNYD-------TDKGDFGGFGSVSGKIEIEIKIN-HEG 301 (368)
Q Consensus 252 ~~~~~~~~~~~~~~------------~----------~~~~~~~~d-------~~~~~~~~~~~~~~~~~~~~~~~-h~~ 301 (368)
.+++|......... . .......+. ...+.+.+|+..+++....+... |..
T Consensus 274 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~s~s~d~~i~iwd~~~~~~~~~l~~~~~~~ 353 (383)
T 3ei3_B 274 EIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQLLLNDKRTIDIYDANSGGLVHQLRDPNAAG 353 (383)
T ss_dssp EEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTTCTTCCCCEEEEETTTCCEEEEECBTTBCS
T ss_pred cEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCcccccCCCCeEEEEecCCCceeeeecCCCCCc
Confidence 88877532110000 0 000001111 24567889999999887777622 567
Q ss_pred ceeEEEEeCCCCcEEEEecCCCeEEEEECCC
Q psy4579 302 EVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 302 ~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
.+.+++|+|++ .+|++|+ ||.|++||++.
T Consensus 354 ~~~~~~~s~~g-~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 354 IISLNKFSPTG-DVLASGM-GFNILIWNRED 382 (383)
T ss_dssp CCCEEEECTTS-SEEEEEE-TTEEEEEECC-
T ss_pred eEEEEEEecCc-cEEEEec-CCcEEEEecCC
Confidence 78888999999 6888887 99999999963
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.7e-29 Score=229.35 Aligned_cols=250 Identities=15% Similarity=0.166 Sum_probs=175.9
Q ss_pred CceeeEecCCcccccCCCCccccccCcceeeeccccCC-CCCcEEEEEEecCCCccccccCCcccCCCCcccCCCCCeee
Q psy4579 42 PSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSD-EQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQF 120 (368)
Q Consensus 42 ~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~ 120 (368)
.+.+++|+||+++|++|+.|+.+++|+.. .+..... ......|.++.|.+.+..+... +.||.|++|+.....
T Consensus 125 ~v~~v~~s~dg~~l~s~~~d~~i~iwd~~--~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~----s~d~~v~iwd~~~~~ 198 (393)
T 1erj_A 125 YIRSVCFSPDGKFLATGAEDRLIRIWDIE--NRKIVMILQGHEQDIYSLDYFPSGDKLVSG----SGDRTVRIWDLRTGQ 198 (393)
T ss_dssp BEEEEEECTTSSEEEEEETTSCEEEEETT--TTEEEEEECCCSSCEEEEEECTTSSEEEEE----ETTSEEEEEETTTTE
T ss_pred eEEEEEECCCCCEEEEEcCCCeEEEEECC--CCcEEEEEccCCCCEEEEEEcCCCCEEEEe----cCCCcEEEEECCCCe
Confidence 48899999999999999999999776543 3332222 1122347778886555444322 368999999987654
Q ss_pred eeccccCCCCceeeEecC-CCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEE
Q psy4579 121 DASNYDTDKGGYGLSWNP-SLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLS 199 (368)
Q Consensus 121 ~~~~~~h~~~v~~l~~sp-~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s 199 (368)
......+...+.+++|+| ++ .+|++|+.||.|++||++++..............+|...|. +++|+|+ +.+|++
T Consensus 199 ~~~~~~~~~~v~~~~~~~~~~-~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~---~v~~~~~-g~~l~s 273 (393)
T 1erj_A 199 CSLTLSIEDGVTTVAVSPGDG-KYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVY---SVVFTRD-GQSVVS 273 (393)
T ss_dssp EEEEEECSSCEEEEEECSTTC-CEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEE---EEEECTT-SSEEEE
T ss_pred eEEEEEcCCCcEEEEEECCCC-CEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEE---EEEECCC-CCEEEE
Confidence 444556778899999999 66 89999999999999999876421110001112267999995 9999998 899999
Q ss_pred eeCCCcEEEEECCCCCCCCc-----cccceeeeecccccEeEEEEee--ecccccCCCCccceEEEEeecCCcccccccc
Q psy4579 200 ASDDHTICLWDINATPKENR-----VIDAKTIFTGHTAVVEDYSIHR--LILGTHTSDEQNHLLIASVQLPNEDAQFDAS 272 (368)
Q Consensus 200 ~s~dg~i~iwd~~~~~~~~~-----~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 272 (368)
|+.||+|++||+++...... ...+...+.+|...|.+++|++ ..+.+++.|+.+
T Consensus 274 ~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v------------------- 334 (393)
T 1erj_A 274 GSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGV------------------- 334 (393)
T ss_dssp EETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEE-------------------
T ss_pred EeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeE-------------------
Confidence 99999999999986432110 0123456778999999999975 234444444333
Q ss_pred cccCCCCCcccccCCCCceeeeeecCcccceeEEEEeC------CCCcEEEEecCCCeEEEEECCC
Q psy4579 273 NYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMP------QNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 273 ~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p------~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
.+|+..+++....+. +|...|.+++|+| ++ .+||||+.||+|++|+++.
T Consensus 335 ---------~iwd~~~~~~~~~l~-~h~~~v~~v~~~~~~~~~p~~-~~l~sgs~Dg~i~iW~~~~ 389 (393)
T 1erj_A 335 ---------LFWDKKSGNPLLMLQ-GHRNSVISVAVANGSSLGPEY-NVFATGSGDCKARIWKYKK 389 (393)
T ss_dssp ---------EEEETTTCCEEEEEE-CCSSCEEEEEECSSCTTCTTC-EEEEEEETTSEEEEEEEEE
T ss_pred ---------EEEECCCCeEEEEEC-CCCCCEEEEEecCCcCcCCCC-CEEEEECCCCcEEECcccc
Confidence 334444566665565 8999999999987 45 6899999999999999864
|
| >3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=7.9e-29 Score=221.16 Aligned_cols=292 Identities=13% Similarity=0.127 Sum_probs=197.3
Q ss_pred CcchheeecccccccCceeeEecCCcccc-cCCCC---ccccccCcceeeeccccCCCCCcEEEEEEecCCCc--ccccc
Q psy4579 27 TPFLYDLVMTHALEWPSLTAQWLPDVTSV-QLPNE---DAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNED--AQFDA 100 (368)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~l-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~ 100 (368)
.|.+...+.. .+.-++.+++|+|++..+ ++++. |+.+.+|+.................|.++.|.+.. ....+
T Consensus 6 ~~~~~~~~~~-~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~ 84 (357)
T 3i2n_A 6 KPQIIAHIQK-GFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLA 84 (357)
T ss_dssp CCCEEEEEEE-ECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEE
T ss_pred hhHHhhhhcc-CCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEE
Confidence 3444444433 366799999999999654 56665 88886665443211111111222357788886652 23333
Q ss_pred CCcccCCCCcccCCCCCee--eeeccccCCCCceeeE------ecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccce
Q psy4579 101 SNYDTDKGGNVQLPNEDAQ--FDASNYDTDKGGYGLS------WNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKT 172 (368)
Q Consensus 101 ~~~~~~~~g~i~i~~~~~~--~~~~~~~h~~~v~~l~------~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~ 172 (368)
.+ +.||.|++|+.... ....+.+|...|.+++ |+|++ .+|++|+.||.|++||++++.. +..
T Consensus 85 ~~---~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~-~~l~~~~~d~~i~vwd~~~~~~------~~~ 154 (357)
T 3i2n_A 85 TG---DFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGA-PEIVTGSRDGTVKVWDPRQKDD------PVA 154 (357)
T ss_dssp EE---ETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CC-CEEEEEETTSCEEEECTTSCSS------CSE
T ss_pred Ee---cCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCc-cEEEEEeCCCeEEEEeCCCCCC------cce
Confidence 33 35899999998753 4566778999999994 57888 8999999999999999987642 345
Q ss_pred eeecccc----ceecceeeE----EeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee---
Q psy4579 173 IFTGHTA----VVEVRYGLS----WNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--- 241 (368)
Q Consensus 173 ~~~~h~~----~v~~~~~i~----~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--- 241 (368)
.+..|.+ .+ .+++ |+|+ +.+|++++.||.|++||++++. ......|...|.+++|+|
T Consensus 155 ~~~~~~~~~~~~v---~~~~~~~~~~~~-~~~l~~~~~d~~i~i~d~~~~~--------~~~~~~~~~~v~~~~~~~~~~ 222 (357)
T 3i2n_A 155 NMEPVQGENKRDC---WTVAFGNAYNQE-ERVVCAGYDNGDIKLFDLRNMA--------LRWETNIKNGVCSLEFDRKDI 222 (357)
T ss_dssp EECCCTTSCCCCE---EEEEEECCCC-C-CCEEEEEETTSEEEEEETTTTE--------EEEEEECSSCEEEEEESCSSS
T ss_pred eccccCCCCCCce---EEEEEEeccCCC-CCEEEEEccCCeEEEEECccCc--------eeeecCCCCceEEEEcCCCCC
Confidence 6655544 55 3777 6787 8999999999999999998863 233456888999999986
Q ss_pred --ecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEe
Q psy4579 242 --LILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATK 319 (368)
Q Consensus 242 --~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasg 319 (368)
..+.+++.++.+++|....... ..........+|...|.+++|+|++..+|++|
T Consensus 223 ~~~~l~~~~~dg~i~i~d~~~~~~------------------------~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 278 (357)
T 3i2n_A 223 SMNKLVATSLEGKFHVFDMRTQHP------------------------TKGFASVSEKAHKSTVWQVRHLPQNRELFLTA 278 (357)
T ss_dssp SCCEEEEEESTTEEEEEEEEEEET------------------------TTEEEEEEEECCSSCEEEEEEETTEEEEEEEE
T ss_pred CCCEEEEECCCCeEEEEeCcCCCc------------------------ccceeeeccCCCcCCEEEEEECCCCCcEEEEE
Confidence 4556666666666654432100 00111111237999999999999995589999
Q ss_pred cCCCeEEEEECCCCCCCCCCC---------CCCCCceeeecccCceeeecceeee
Q psy4579 320 TPSSDVLVFDYTKHPSKPDPN---------GECHPDLRLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 320 s~Dg~i~iwd~~~~~~~~~~~---------~~~~~~~~~~gh~~~V~~l~w~p~~ 365 (368)
+.||.|++||++......... +....+..+.+|.+.|.+++|+|+.
T Consensus 279 ~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 333 (357)
T 3i2n_A 279 GGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDK 333 (357)
T ss_dssp ETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSS
T ss_pred eCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCC
Confidence 999999999998643221110 1113455678999999999999975
|
| >4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A | Back alignment and structure |
|---|
Probab=99.96 E-value=5.7e-29 Score=227.80 Aligned_cols=264 Identities=14% Similarity=0.238 Sum_probs=195.0
Q ss_pred hhhhhhhhhhcCcchheeecccccccCceeeEecCCcccccCCCCccccccCcceeeeccccCCC-CCcEEEEEEecCCC
Q psy4579 16 INEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDE-QNHLLIASVQLPNE 94 (368)
Q Consensus 16 ~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~ 94 (368)
++...++|+..+..+...+..+....+|.+++|+|+|++|++|+.|+.+.+|+.. .+...... .....+.++.+.
T Consensus 123 ld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~--~~~~~~~~~~h~~~v~~~s~~-- 198 (420)
T 4gga_A 123 LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQ--QQKRLRNMTSHSARVGSLSWN-- 198 (420)
T ss_dssp ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETT--TTEEEEEECCCSSCEEEEEEE--
T ss_pred eCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcC--CCcEEEEEeCCCCceEEEeeC--
Confidence 3667899999988777766666677789999999999999999999999777554 33332221 111234444442
Q ss_pred ccccccCCcccCCCCcccCCCCCe--eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccce
Q psy4579 95 DAQFDASNYDTDKGGNVQLPNEDA--QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKT 172 (368)
Q Consensus 95 ~~~~~~~~~~~~~~g~i~i~~~~~--~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~ 172 (368)
..+.+++ +.|+.+++|+... .....+.+|...+.++.|+|++ .++++++.|+.+++|+...+.... ....
T Consensus 199 -~~~l~sg---s~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g-~~l~s~~~D~~v~i~~~~~~~~~~---~~~~ 270 (420)
T 4gga_A 199 -SYILSSG---SRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDG-RHLASGGNDNLVNVWPSAPGEGGW---VPLQ 270 (420)
T ss_dssp -TTEEEEE---ETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTS-SEEEEEETTSCEEEEESSCCSSCS---CCSE
T ss_pred -CCEEEEE---eCCCceeEeeecccceeeEEecccccceeeeeecCCC-CeeeeeeccccceEEeeccccccc---eeee
Confidence 1223332 4689999998653 4456678899999999999999 999999999999999998765322 2456
Q ss_pred eeeccccceecceeeEEeCCCCCeEEE--eeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee----ecccc
Q psy4579 173 IFTGHTAVVEVRYGLSWNPSLNGYLLS--ASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR----LILGT 246 (368)
Q Consensus 173 ~~~~h~~~v~~~~~i~~~p~~~~~l~s--~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~----~~~~~ 246 (368)
....|...|. +++|+|.+..++++ |+.|++|++||++++ .+...+..| ..+.++.|.+ .+.++
T Consensus 271 ~~~~~~~~V~---~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~-------~~~~~~~~~-~~v~~~~~~~~~~~lv~~s 339 (420)
T 4gga_A 271 TFTQHQGAVK---AVAWCPWQSNVLATGGGTSDRHIRIWNVCSG-------ACLSAVDAH-SQVCSILWSPHYKELISGH 339 (420)
T ss_dssp EECCCSSCEE---EEEECTTCTTEEEEEECTTTCEEEEEETTTT-------EEEEEEECS-SCEEEEEEETTTTEEEEEE
T ss_pred eecccCCcee---eeeeCCCcccEEEEEeecCCCEEEEEeCCcc-------ccceeeccc-cceeeeeecCCCCeEEEEE
Confidence 7788999996 99999986777776 458999999999987 344555544 4577777764 12222
Q ss_pred cCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEE
Q psy4579 247 HTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVL 326 (368)
Q Consensus 247 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~ 326 (368)
+..| +.+.+|+..+++.+..+. +|.+.|++++|+|++ .+|+|||.|++|+
T Consensus 340 g~~d----------------------------~~I~iwd~~~~~~v~~l~-gH~~~V~~l~~spdg-~~l~S~s~D~tvr 389 (420)
T 4gga_A 340 GFAQ----------------------------NQLVIWKYPTMAKVAELK-GHTSRVLSLTMSPDG-ATVASAAADETLR 389 (420)
T ss_dssp CTTT----------------------------CCEEEEETTTCCEEEEEC-CCSSCEEEEEECTTS-SCEEEEETTTEEE
T ss_pred ecCC----------------------------CEEEEEECCCCcEEEEEc-CCCCCEEEEEEcCCC-CEEEEEecCCeEE
Confidence 2222 335555666677777776 899999999999999 6788999999999
Q ss_pred EEECCC
Q psy4579 327 VFDYTK 332 (368)
Q Consensus 327 iwd~~~ 332 (368)
|||+..
T Consensus 390 iWdv~~ 395 (420)
T 4gga_A 390 LWRCFE 395 (420)
T ss_dssp EECCSC
T ss_pred EEECCC
Confidence 999975
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.96 E-value=4.7e-28 Score=218.26 Aligned_cols=246 Identities=11% Similarity=0.095 Sum_probs=171.8
Q ss_pred cccCceeeEecCCcccccCCCCccccccCcceeeec--cccCCC-CCcEEEEEEecCCCccccccCCcccCCCCcccCCC
Q psy4579 39 LEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKG--THTSDE-QNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPN 115 (368)
Q Consensus 39 ~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~ 115 (368)
...|+.+++|+|++++|++++.|+.+.+|+.. .+ ...... .....|.++.+.+.+..+... +.||.|++|+
T Consensus 10 ~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~--~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~----s~d~~v~vwd 83 (377)
T 3dwl_C 10 LPKPSYEHAFNSQRTEFVTTTATNQVELYEQD--GNGWKHARTFSDHDKIVTCVDWAPKSNRIVTC----SQDRNAYVYE 83 (377)
T ss_dssp CSSCCSCCEECSSSSEEECCCSSSCBCEEEEE--TTEEEECCCBCCCSSCEEEEEECTTTCCEEEE----ETTSSEEEC-
T ss_pred CCCcEEEEEECCCCCEEEEecCCCEEEEEEcc--CCceEEEEEEecCCceEEEEEEeCCCCEEEEE----eCCCeEEEEE
Confidence 34689999999999999999999999666544 33 233332 223457888886655443332 3589999999
Q ss_pred CCeee----eeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeec-cccceecceeeEEe
Q psy4579 116 EDAQF----DASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTG-HTAVVEVRYGLSWN 190 (368)
Q Consensus 116 ~~~~~----~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~i~~~ 190 (368)
..... ...+..|...|++++|+|++ ++|++|+.|+.|++||++++... .....+.+ |...|. +++|+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~----~~~~~~~~~h~~~v~---~~~~~ 155 (377)
T 3dwl_C 84 KRPDGTWKQTLVLLRLNRAATFVRWSPNE-DKFAVGSGARVISVCYFEQENDW----WVSKHLKRPLRSTIL---SLDWH 155 (377)
T ss_dssp -----CCCCEEECCCCSSCEEEEECCTTS-SCCEEEESSSCEEECCC-----C----CCCEEECSSCCSCEE---EEEEC
T ss_pred cCCCCceeeeeEecccCCceEEEEECCCC-CEEEEEecCCeEEEEEECCcccc----eeeeEeecccCCCeE---EEEEc
Confidence 87644 56677899999999999998 89999999999999999876421 13466777 999996 99999
Q ss_pred CCCCCeEEEeeCCCcEEEEECCCCCCCC-----------ccccceeeeecccccEeEEEEee--ecccccCCCCccceEE
Q psy4579 191 PSLNGYLLSASDDHTICLWDINATPKEN-----------RVIDAKTIFTGHTAVVEDYSIHR--LILGTHTSDEQNHLLI 257 (368)
Q Consensus 191 p~~~~~l~s~s~dg~i~iwd~~~~~~~~-----------~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~d~~~~~~~ 257 (368)
|+ +.+|++|+.||.|++||++...... +.-.+...+ +|...|.+++|+| ..+++++.|+.++
T Consensus 156 ~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~--- 230 (377)
T 3dwl_C 156 PN-NVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVT--- 230 (377)
T ss_dssp TT-SSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC---
T ss_pred CC-CCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEE---
Confidence 98 8999999999999999996432111 011334455 8999999999986 2344444444333
Q ss_pred EEeecCCcccccccccccCCCCCcccccCCCCce----eeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECC
Q psy4579 258 ASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKI----EIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYT 331 (368)
Q Consensus 258 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~----~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~ 331 (368)
+|+..+++. ...+. +|...|.+++|+|++ .+|++|+.|+.+ +|+..
T Consensus 231 -------------------------iwd~~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~-~~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 231 -------------------------IAYPSAPEQPPRALITVK-LSQLPLRSLLWANES-AIVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp --------------------------CEECSTTSCEEECCCEE-CSSSCEEEEEEEETT-EEEEEESSSSEE-EECCC
T ss_pred -------------------------EEECCCCCCcceeeEeec-CCCCceEEEEEcCCC-CEEEEEcCCcEE-EEEeC
Confidence 344444443 33344 899999999999999 688888766666 77665
|
| >4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=5.3e-28 Score=219.64 Aligned_cols=300 Identities=14% Similarity=0.135 Sum_probs=215.0
Q ss_pred hhhhhhhhhhhcCcchheeecccccccCceeeEecC-CcccccCCCCccccccCcceeeeccccCC------------CC
Q psy4579 15 VINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLP-DVTSVQLPNEDAQFDASNYDTDKGTHTSD------------EQ 81 (368)
Q Consensus 15 ~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~------------~~ 81 (368)
..+...++|..........+.. +.-++.+++|+| ++++|++++.||.+.+|+.+......... ..
T Consensus 20 ~~~~~~~v~~~~~~~~~~~~~~--h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (408)
T 4a11_B 20 RAESTRRVLGLELNKDRDVERI--HGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDV 97 (408)
T ss_dssp HHHHHHHHHTEEECTTEEECCC--CSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTC
T ss_pred eccCcceeeccccCcceeeeec--cCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEecccccccccccccc
Confidence 3556678888877666554444 467999999999 99999999999999777554322111110 01
Q ss_pred CcEEEEEEecCCCccccccCCcccCCCCcccCCCCCeeeeeccccCCCCceeeEecCCCC--CeeEEEeCCCcEEEEeCC
Q psy4579 82 NHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQFDASNYDTDKGGYGLSWNPSLN--GYLLSASDDHTICLWDIN 159 (368)
Q Consensus 82 ~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~--~~lasg~~dg~v~iwd~~ 159 (368)
....|.++.+.+.+....+++ +.||.|++|+...........+...+.++.|+|.++ .++++|+.||.|++||++
T Consensus 98 ~~~~v~~~~~~~~~~~~l~s~---~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~ 174 (408)
T 4a11_B 98 HRYSVETVQWYPHDTGMFTSS---SFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLK 174 (408)
T ss_dssp CSSCEEEEEECTTCTTCEEEE---ETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESS
T ss_pred CCCcEEEEEEccCCCcEEEEE---eCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCC
Confidence 234577888865333333333 358999999998766666667889999999999652 499999999999999998
Q ss_pred CCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccc---------cceeeeecc
Q psy4579 160 ATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVI---------DAKTIFTGH 230 (368)
Q Consensus 160 ~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~---------~~~~~~~~~ 230 (368)
++. ....+.+|...|. +++|+|++..+|++|+.||.|++||++........+ .......+|
T Consensus 175 ~~~-------~~~~~~~~~~~v~---~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (408)
T 4a11_B 175 SGS-------CSHILQGHRQEIL---AVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAH 244 (408)
T ss_dssp SSC-------CCEEECCCCSCEE---EEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSC
T ss_pred Ccc-------eeeeecCCCCcEE---EEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccc
Confidence 764 4678889999996 999999933369999999999999998764211110 112223578
Q ss_pred cccEeEEEEee--ecccccCCCCccceEEEEeecCC----------------------cccccccccccCCCCCcccccC
Q psy4579 231 TAVVEDYSIHR--LILGTHTSDEQNHLLIASVQLPN----------------------EDAQFDASNYDTDKGDFGGFGS 286 (368)
Q Consensus 231 ~~~v~~v~~~~--~~~~~~~~d~~~~~~~~~~~~~~----------------------~~~~~~~~~~d~~~~~~~~~~~ 286 (368)
...|.+++|++ ..+.+++.++.+++|........ ....+... ...+.+.+|+.
T Consensus 245 ~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~i~v~d~ 321 (408)
T 4a11_B 245 NGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFV---PYGSTIAVYTV 321 (408)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEE---EETTEEEEEET
T ss_pred cCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEE---ecCCEEEEEEC
Confidence 89999999986 46777777877777753211000 00011111 12356778888
Q ss_pred CCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCC
Q psy4579 287 VSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHP 334 (368)
Q Consensus 287 ~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~ 334 (368)
.+++....+. +|...|.+++|+|++ .+|++|+.||.|++||++...
T Consensus 322 ~~~~~~~~~~-~~~~~v~~~~~s~~~-~~l~s~~~dg~i~iw~~~~~~ 367 (408)
T 4a11_B 322 YSGEQITMLK-GHYKTVDCCVFQSNF-QELYSGSRDCNILAWVPSLYE 367 (408)
T ss_dssp TTCCEEEEEC-CCSSCEEEEEEETTT-TEEEEEETTSCEEEEEECC--
T ss_pred cCCcceeeec-cCCCeEEEEEEcCCC-CEEEEECCCCeEEEEeCCCCC
Confidence 8888877776 899999999999999 688899999999999998643
|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A | Back alignment and structure |
|---|
Probab=99.96 E-value=4e-29 Score=223.77 Aligned_cols=299 Identities=14% Similarity=0.118 Sum_probs=200.6
Q ss_pred cchhee--ecccccccCceeeEecCC----cccccCCCCccccccCcceeeeccccCC------CCCcEEEEEEecCCCc
Q psy4579 28 PFLYDL--VMTHALEWPSLTAQWLPD----VTSVQLPNEDAQFDASNYDTDKGTHTSD------EQNHLLIASVQLPNED 95 (368)
Q Consensus 28 ~~~~~~--~~~~~~~~~~~~~~~~p~----~~~l~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~i~~~~~~~~~ 95 (368)
|+.|.. .....+.-++.+++|+|+ ...+++++.++.+.+|+.. .+..... ......+.++.|.+..
T Consensus 4 ~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 81 (366)
T 3k26_A 4 KYSFKCVNSLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECH--SQGEIRLLQSYVDADADENFYTCAWTYDS 81 (366)
T ss_dssp -CCCEEEEEEECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEEC--GGGCEEEEEEEECSCTTCCEEEEEEEECT
T ss_pred eeEEEEEEEeecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcC--CCcEEEeeeeccccCCCCcEEEEEeccCC
Confidence 444443 233346779999999994 3445555566677666544 2222111 1122346677774432
Q ss_pred ---cccccCCcccCCCCcccCCCCCe-eeeeccccCCCCceeeEecC-CCCCeeEEEeCCCcEEEEeCCCCCCCCccccc
Q psy4579 96 ---AQFDASNYDTDKGGNVQLPNEDA-QFDASNYDTDKGGYGLSWNP-SLNGYLLSASDDHTICLWDINATPKENRVIDA 170 (368)
Q Consensus 96 ---~~~~~~~~~~~~~g~i~i~~~~~-~~~~~~~~h~~~v~~l~~sp-~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~ 170 (368)
..+.+.+ +.||.|++|+... +....+.+|...|.+++|+| ++ .+|++|+.||.|++||++++. .
T Consensus 82 ~~~~~~l~~~---~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~-------~ 150 (366)
T 3k26_A 82 NTSHPLLAVA---GSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDP-NLLLSVSKDHALRLWNIQTDT-------L 150 (366)
T ss_dssp TTCCEEEEEE---ETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCT-TEEEEEETTSCEEEEETTTTE-------E
T ss_pred CCCCCEEEEe---cCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCC-CEEEEEeCCCeEEEEEeecCe-------E
Confidence 1233332 3589999999864 55566778999999999999 66 999999999999999998763 3
Q ss_pred ceee---eccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCcc---------------------ccceee
Q psy4579 171 KTIF---TGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRV---------------------IDAKTI 226 (368)
Q Consensus 171 ~~~~---~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~---------------------~~~~~~ 226 (368)
...+ .+|...|. +++|+|+ +.+|++++.||.|++||++++.....+ ......
T Consensus 151 ~~~~~~~~~~~~~v~---~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (366)
T 3k26_A 151 VAIFGGVEGHRDEVL---SADYDLL-GEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFST 226 (366)
T ss_dssp EEEECSTTSCSSCEE---EEEECTT-SSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEE
T ss_pred EEEecccccccCcee---EEEECCC-CCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCcccc
Confidence 4555 68999996 9999998 899999999999999999875211000 001223
Q ss_pred eecccccEeEEEEeeecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEE
Q psy4579 227 FTGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRA 306 (368)
Q Consensus 227 ~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~ 306 (368)
..+|...|.+++|+...+.+++.++.+++|..... ..... ..... .........+ .+|...|.++
T Consensus 227 ~~~~~~~v~~~~~~~~~l~~~~~d~~i~~wd~~~~----~~~~~--~~~~~--------~~~~~~~~~~-~~~~~~v~~~ 291 (366)
T 3k26_A 227 RDIHRNYVDCVRWLGDLILSKSCENAIVCWKPGKM----EDDID--KIKPS--------ESNVTILGRF-DYSQCDIWYM 291 (366)
T ss_dssp CSSCSSCCCEEEEETTEEEEECSSSEEEEEEESST----TCCGG--GCCTT--------CCCEEEEEEE-ECSSCCSSCC
T ss_pred ccCCcceEEEEEEcCCEEEEEecCCEEEEEeCCCc----ccccc--ccccC--------Ccchheeccc-cccCCcEEEE
Confidence 33488999999999878888888877777654311 00000 00000 0011222333 3799999999
Q ss_pred EEeCC--CCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeecc--cCceeeecceeee
Q psy4579 307 RYMPQ--NPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGH--QKEGLIEGTYNCY 365 (368)
Q Consensus 307 ~~~p~--~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh--~~~V~~l~w~p~~ 365 (368)
+|+|+ + .+|++|+.||.|++||++.... .......+.+| ...|++++|+|+.
T Consensus 292 ~~s~~~~~-~~l~~~~~dg~i~vwd~~~~~~------~~~~~~~~~~~~~~~~v~~~~~s~~~ 347 (366)
T 3k26_A 292 RFSMDFWQ-KMLALGNQVGKLYVWDLEVEDP------HKAKCTTLTHHKCGAAIRQTSFSRDS 347 (366)
T ss_dssp CCEECTTS-SEEEEECTTSCEEEEECCSSSG------GGCEEEEECCTTCCSCEEEEEECTTS
T ss_pred EEcCCCCC-cEEEEEecCCcEEEEECCCCCC------ccccceEEcccccCCceEEEEeCCCC
Confidence 99999 8 7888999999999999975210 01123356677 7999999999875
|
| >2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R | Back alignment and structure |
|---|
Probab=99.96 E-value=9.3e-28 Score=213.81 Aligned_cols=220 Identities=20% Similarity=0.207 Sum_probs=160.6
Q ss_pred EEEEEec-----CCCccccccCCcccCCCCcccCCCCCe--------eeeeccccCCCCceeeEecCCCCCeeEEEeCCC
Q psy4579 85 LIASVQL-----PNEDAQFDASNYDTDKGGNVQLPNEDA--------QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDH 151 (368)
Q Consensus 85 ~i~~~~~-----~~~~~~~~~~~~~~~~~g~i~i~~~~~--------~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg 151 (368)
.|.++.+ .+.+....+++ +.||+|++|+... .....+.+|...|++++|+|++ .++++|+.|+
T Consensus 23 ~V~~~~~~~s~~~~~d~~~l~sg---s~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~-~~l~s~s~D~ 98 (343)
T 2xzm_R 23 WVTSIVAGFSQKENEDSPVLISG---SRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQEN-CFAISSSWDK 98 (343)
T ss_dssp CEEEEEECCCSSTTCCCCEEEEE---ETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSST-TEEEEEETTS
T ss_pred hhhheeeEEEeecCCCCCEEEEE---cCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCC-CEEEEEcCCC
Confidence 4666665 33233333333 4699999998752 3345678899999999999998 8999999999
Q ss_pred cEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeeccc
Q psy4579 152 TICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHT 231 (368)
Q Consensus 152 ~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 231 (368)
+|++||++++. ....+.+|...|. +++|+|+ +.+|++|+.|++|++||++.... .......+|.
T Consensus 99 ~v~lwd~~~~~-------~~~~~~~h~~~v~---~v~~sp~-~~~l~s~~~d~~i~~wd~~~~~~-----~~~~~~~~~~ 162 (343)
T 2xzm_R 99 TLRLWDLRTGT-------TYKRFVGHQSEVY---SVAFSPD-NRQILSAGAEREIKLWNILGECK-----FSSAEKENHS 162 (343)
T ss_dssp EEEEEETTSSC-------EEEEEECCCSCEE---EEEECSS-TTEEEEEETTSCEEEEESSSCEE-----EECCTTTSCS
T ss_pred cEEEEECCCCc-------EEEEEcCCCCcEE---EEEECCC-CCEEEEEcCCCEEEEEeccCCce-----eeeecccCCC
Confidence 99999998864 5678899999996 9999998 89999999999999999974310 0011123688
Q ss_pred ccEeEEEEeee------------cccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCc
Q psy4579 232 AVVEDYSIHRL------------ILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINH 299 (368)
Q Consensus 232 ~~v~~v~~~~~------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h 299 (368)
..|.+++|+|. .+++++.|+. +.+|+ ........+. +|
T Consensus 163 ~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~----------------------------i~iwd-~~~~~~~~~~-~h 212 (343)
T 2xzm_R 163 DWVSCVRYSPIMKSANKVQPFAPYFASVGWDGR----------------------------LKVWN-TNFQIRYTFK-AH 212 (343)
T ss_dssp SCEEEEEECCCCCSCSCCCSSCCEEEEEETTSE----------------------------EEEEE-TTTEEEEEEE-CC
T ss_pred ceeeeeeeccccccccccCCCCCEEEEEcCCCE----------------------------EEEEc-CCCceeEEEc-Cc
Confidence 89999999873 2233333333 33344 1233344444 89
Q ss_pred ccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeecccCceeeecceeee
Q psy4579 300 EGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 300 ~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p~~ 365 (368)
...|.+++|+|++ .+|++|+.||+|++||++.. ..+... ..|...|.+++|+|..
T Consensus 213 ~~~v~~~~~s~~g-~~l~sgs~dg~v~iwd~~~~---------~~~~~~-~~~~~~v~~v~~sp~~ 267 (343)
T 2xzm_R 213 ESNVNHLSISPNG-KYIATGGKDKKLLIWDILNL---------TYPQRE-FDAGSTINQIAFNPKL 267 (343)
T ss_dssp SSCEEEEEECTTS-SEEEEEETTCEEEEEESSCC---------SSCSEE-EECSSCEEEEEECSSS
T ss_pred cccceEEEECCCC-CEEEEEcCCCeEEEEECCCC---------ccccee-ecCCCcEEEEEECCCC
Confidence 9999999999999 68889999999999999531 122222 2456679999999974
|
| >2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.6e-29 Score=234.93 Aligned_cols=293 Identities=10% Similarity=0.034 Sum_probs=191.5
Q ss_pred hhhhhhhhhhcCcchhee-ecc-cccccCceeeEecCC------cccccCCCCccccccCcceeeecc-----ccC----
Q psy4579 16 INEEYKIWKKNTPFLYDL-VMT-HALEWPSLTAQWLPD------VTSVQLPNEDAQFDASNYDTDKGT-----HTS---- 78 (368)
Q Consensus 16 ~~~~~~~w~~~~~~~~~~-~~~-~~~~~~~~~~~~~p~------~~~l~~~~~~~~~~~~~~~~~~~~-----~~~---- 78 (368)
.+...++|+..+..+... ... ....-++.+++|+|+ +..||+++.||++++|+....... ...
T Consensus 181 ~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~ 260 (524)
T 2j04_B 181 HSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSL 260 (524)
T ss_dssp -CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSE
T ss_pred CCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceE
Confidence 456678999876543211 111 112346889999997 578999999999977765322100 000
Q ss_pred C-CCCcEEEEEEecCCCccccccCCcccCCCCcccCCCCCee-e-eeccccCCCCceee--EecCCCCCeeEEEeCCCcE
Q psy4579 79 D-EQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQ-F-DASNYDTDKGGYGL--SWNPSLNGYLLSASDDHTI 153 (368)
Q Consensus 79 ~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~-~-~~~~~~h~~~v~~l--~~sp~~~~~lasg~~dg~v 153 (368)
. ......+.++.|.+.. . .+++ +.||+|++|++... . ...+..|.+.|+++ .|+|+++.+||||+.||+|
T Consensus 261 ~l~~h~~~v~sv~~s~~~-~-lasg---s~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tv 335 (524)
T 2j04_B 261 TLSLADSLITTFDFLSPT-T-VVCG---FKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYF 335 (524)
T ss_dssp EECCTTTCEEEEEESSSS-E-EEEE---ETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEE
T ss_pred EEEcCCCCEEEEEecCCC-e-EEEE---eCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeE
Confidence 1 1112347788885433 2 3333 46999999998743 2 23467899999999 5777754789999999999
Q ss_pred EEEeCCCCCCCCcccccceeeecccc--ceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeeccc
Q psy4579 154 CLWDINATPKENRVIDAKTIFTGHTA--VVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHT 231 (368)
Q Consensus 154 ~iwd~~~~~~~~~~~~~~~~~~~h~~--~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 231 (368)
+|||++++. +...+.+|.. .+ .+++|+|+ +..+++++.|++|++||++++ .+...+.+|.
T Consensus 336 klWD~~~~~-------~~~~~~~~~~~~~v---~~v~fsp~-~~~l~s~~~d~tv~lwd~~~~-------~~~~~l~gH~ 397 (524)
T 2j04_B 336 YIFNPKDIA-------TTKTTVSRFRGSNL---VPVVYCPQ-IYSYIYSDGASSLRAVPSRAA-------FAVHPLVSRE 397 (524)
T ss_dssp EEECGGGHH-------HHCEEEEECSCCSC---CCEEEETT-TTEEEEECSSSEEEEEETTCT-------TCCEEEEECS
T ss_pred EEEECCCCC-------cccccccccccCcc---cceEeCCC-cCeEEEeCCCCcEEEEECccc-------ccceeeecCC
Confidence 999998753 3456667754 35 39999998 888999999999999999986 3456788899
Q ss_pred ccEeEEEEee--ecccccCCCCccceEEEEeecCCccc---------ccccccccCCCCCccccc------C-CCCceee
Q psy4579 232 AVVEDYSIHR--LILGTHTSDEQNHLLIASVQLPNEDA---------QFDASNYDTDKGDFGGFG------S-VSGKIEI 293 (368)
Q Consensus 232 ~~v~~v~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~---------~~~~~~~d~~~~~~~~~~------~-~~~~~~~ 293 (368)
..|++++|+| ..+++++.|+.+++|......-.... .+....+.+..+.+.+++ . .++....
T Consensus 398 ~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~ 477 (524)
T 2j04_B 398 TTITAIGVSRLHPMVLAGSADGSLIITNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKA 477 (524)
T ss_dssp SCEEEEECCSSCCBCEEEETTTEEECCBSCSSTTTCC------CCCCEEEECBCCSSSCEEEECCCCCCCC---------
T ss_pred CceEEEEeCCCCCeEEEEECCCEEEEEechHhhccccccCccceeeeEEEEeccCCCCCeEEccCCceecccccCCccee
Confidence 9999999986 46778888888877643221111000 000111222211122222 1 1344444
Q ss_pred eeecCcccceeEEEEeCCCC--cEEEEecCCCeEEEEECCC
Q psy4579 294 EIKINHEGEVNRARYMPQNP--CVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 294 ~~~~~h~~~i~~~~~~p~~~--~~lasgs~Dg~i~iwd~~~ 332 (368)
.+. +|...|++|+|+|+++ .++|+|+.||+|+||+++.
T Consensus 478 ~l~-gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~~ 517 (524)
T 2j04_B 478 KID-AHGINITCTKWNETSAGGKCYAFSNSAGLLTLEYLSL 517 (524)
T ss_dssp -----CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEECSC
T ss_pred eec-CCCceEEEEECCCCCCccHHHHhhccCceEEEEEccc
Confidence 554 8999999999999963 4899999999999999973
|
| >2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A | Back alignment and structure |
|---|
Probab=99.96 E-value=4.8e-28 Score=220.36 Aligned_cols=278 Identities=14% Similarity=0.094 Sum_probs=197.0
Q ss_pred hheeecccccccCceeeEecCCccccc-CCCCccccccCcceeeecc--ccCC-CCCcEEEEEEecCCCccccccCCccc
Q psy4579 30 LYDLVMTHALEWPSLTAQWLPDVTSVQ-LPNEDAQFDASNYDTDKGT--HTSD-EQNHLLIASVQLPNEDAQFDASNYDT 105 (368)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~p~~~~l~-~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~ 105 (368)
+|+-+......|-...++++|+...++ +++.+|.+.+|+....... .... ......|.++.|.+.+....+++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~--- 100 (402)
T 2aq5_A 24 CYEDVRVSQTTWDSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASG--- 100 (402)
T ss_dssp SEESCCBCCCCCSSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEE---
T ss_pred cEecceeecCccCCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEE---
Confidence 444444455678888899999977554 5789999977765332111 1111 12234588888866333333333
Q ss_pred CCCCcccCCCCCe--------eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceee--e
Q psy4579 106 DKGGNVQLPNEDA--------QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIF--T 175 (368)
Q Consensus 106 ~~~g~i~i~~~~~--------~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~--~ 175 (368)
+.||.|++|+... .....+.+|...|.+++|+|++.++|++|+.||.|++||++++. ....+ .
T Consensus 101 s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~-------~~~~~~~~ 173 (402)
T 2aq5_A 101 SEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGA-------AVLTLGPD 173 (402)
T ss_dssp ETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTE-------EEEEECTT
T ss_pred eCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCC-------ccEEEecC
Confidence 3589999999864 33556778999999999999985699999999999999998764 45667 7
Q ss_pred ccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeee-eccccc-EeEEEEee--eccccc---C
Q psy4579 176 GHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIF-TGHTAV-VEDYSIHR--LILGTH---T 248 (368)
Q Consensus 176 ~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~-v~~v~~~~--~~~~~~---~ 248 (368)
+|...|. +++|+|+ +.+|++++.||.|++||++++ ..+..+ .+|... +.++.|++ .++.++ +
T Consensus 174 ~~~~~v~---~~~~~~~-~~~l~~~~~d~~i~iwd~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~ 242 (402)
T 2aq5_A 174 VHPDTIY---SVDWSRD-GALICTSCRDKRVRVIEPRKG-------TVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRM 242 (402)
T ss_dssp TCCSCEE---EEEECTT-SSCEEEEETTSEEEEEETTTT-------EEEEEEECSSCSSSCCEEEECSTTEEEEEEECTT
T ss_pred CCCCceE---EEEECCC-CCEEEEEecCCcEEEEeCCCC-------ceeeeeccCCCCCcceEEEEcCCCcEEEEeccCC
Confidence 8999996 9999998 899999999999999999986 345566 567665 78888875 222222 2
Q ss_pred CCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCce-eeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEE
Q psy4579 249 SDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKI-EIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLV 327 (368)
Q Consensus 249 ~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~i 327 (368)
.+ +.+.+|+..+++. .......|...|.+++|+|++..++++|+.||.|++
T Consensus 243 ~d----------------------------~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i 294 (402)
T 2aq5_A 243 SE----------------------------RQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRY 294 (402)
T ss_dssp CC----------------------------EEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEE
T ss_pred CC----------------------------ceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEE
Confidence 22 2233344444333 222333678899999999999666678889999999
Q ss_pred EECCCCCCCCCCCCCCCC-ceeeec--ccCceeeecceeeee
Q psy4579 328 FDYTKHPSKPDPNGECHP-DLRLRG--HQKEGLIEGTYNCYL 366 (368)
Q Consensus 328 wd~~~~~~~~~~~~~~~~-~~~~~g--h~~~V~~l~w~p~~~ 366 (368)
||++. ..+ +..+.+ |...|.+++|+|+..
T Consensus 295 ~d~~~----------~~~~~~~l~~~~~~~~v~~~~~sp~~~ 326 (402)
T 2aq5_A 295 FEITS----------EAPFLHYLSMFSSKESQRGMGYMPKRG 326 (402)
T ss_dssp EEECS----------STTCEEEEEEECCSSCCSEEEECCGGG
T ss_pred EEecC----------CCcceEeecccccCCcccceEEecccc
Confidence 99975 222 334444 569999999999753
|
| >2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-27 Score=219.59 Aligned_cols=253 Identities=10% Similarity=0.044 Sum_probs=177.0
Q ss_pred cccccCceeeEecCCcccccCCCCccccccCcceeeeccccCCCCCcEEEEEEecCCCccccccCCcccCCCCcccCCCC
Q psy4579 37 HALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNE 116 (368)
Q Consensus 37 ~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~ 116 (368)
..+.--+.+++|+|||+.+|++|.|++++ +...+.... .+...+..+.+.+.+ .++.+.+|+.
T Consensus 12 ~~~~~~v~sv~~SpDG~~iASas~D~TV~----d~~~~~~l~--gh~~~v~~V~FsPdg-----------~~~~~~~~~~ 74 (588)
T 2j04_A 12 KEFEDWKNNLTWARDGTLYLTTFPDISIG----QPKYAKDIN--CNSKNLFHVKEFPLE-----------FENKLDFELA 74 (588)
T ss_dssp CCCSSSSCCEEECTTSCEEEECSSSEEEE----EECCCSCCS--SBGGGTEEEEEECCC-----------CCCTTTTSCC
T ss_pred hHhhccEEEEEECCCCCEEEEEcCCceee----cccccceec--CCCccEEEEEECCCC-----------CcceEEEEeC
Confidence 34555688899999999999999999985 333332221 122235555553322 3677777776
Q ss_pred CeeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeecccc-----ceecceeeEEeC
Q psy4579 117 DAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTA-----VVEVRYGLSWNP 191 (368)
Q Consensus 117 ~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~-----~v~~~~~i~~~p 191 (368)
++...... .|...|.+++|||+| ..||+++.||+|++||..+ ....+. |.. .+. +++|||
T Consensus 75 ~~~~~~~~-~~~~~V~~vawSPdG-~~LAs~s~dg~V~iwd~~~---------~l~~l~-~~~~~~~~sv~---svafSP 139 (588)
T 2j04_A 75 QQNGLLNS-QPVCYPRVCKPSPID-DWMAVLSNNGNVSVFKDNK---------MLTNLD-SKGNLSSRTYH---CFEWNP 139 (588)
T ss_dssp CSSCSSTT-SCSCCEEEEEECSSS-SCEEEEETTSCEEEEETTE---------EEEECC-CSSCSTTTCEE---EEEECS
T ss_pred CCceEeec-CCCCcEEEEEECCCC-CEEEEEeCCCcEEEEeCCc---------eeeecc-CCCccccccEE---EEEEcC
Confidence 65544443 458899999999999 9999999999999999543 334455 654 375 999999
Q ss_pred CCCCeEEEeeCCCcEEEEECCCCCCCCccccceeee----ecccccEeEEEEeeecccccCCCCccceEEEEeecCCccc
Q psy4579 192 SLNGYLLSASDDHTICLWDINATPKENRVIDAKTIF----TGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDA 267 (368)
Q Consensus 192 ~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~----~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 267 (368)
+ +++||+|+.||+|+|||+.++.......-.+..+ .+|...|.+++|+|.-+++++.|+.+++|
T Consensus 140 D-G~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdgLaass~D~tVrlW----------- 207 (588)
T 2j04_A 140 I-ESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDVLVAALSNNSVFSM----------- 207 (588)
T ss_dssp S-SSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTEEEEEETTCCEEEE-----------
T ss_pred C-CCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCcEEEEeCCCeEEEE-----------
Confidence 9 9999999999999999998763211100123454 66888999999997324444445444443
Q ss_pred ccccccccCCCCCcccccCCCCce---eeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCC
Q psy4579 268 QFDASNYDTDKGDFGGFGSVSGKI---EIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECH 344 (368)
Q Consensus 268 ~~~~~~~d~~~~~~~~~~~~~~~~---~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~ 344 (368)
+...+.. ...+..+|...|.+++|+ + ..||+++ |++|++||+.. .
T Consensus 208 -----------------d~~~~~~~~~~~tL~~~h~~~V~svaFs--g-~~LASa~-~~tIkLWd~~~-----------~ 255 (588)
T 2j04_A 208 -----------------TVSASSHQPVSRMIQNASRRKITDLKIV--D-YKVVLTC-PGYVHKIDLKN-----------Y 255 (588)
T ss_dssp -----------------CCCSSSSCCCEEEEECCCSSCCCCEEEE--T-TEEEEEC-SSEEEEEETTT-----------T
T ss_pred -----------------ECCCCccccceeeecccccCcEEEEEEE--C-CEEEEEe-CCeEEEEECCC-----------C
Confidence 2222332 123333788999999999 5 5777876 69999999974 2
Q ss_pred Cceeee-cccCceeeecc--eeee
Q psy4579 345 PDLRLR-GHQKEGLIEGT--YNCY 365 (368)
Q Consensus 345 ~~~~~~-gh~~~V~~l~w--~p~~ 365 (368)
....+. ||.+.|++++| +|+.
T Consensus 256 ~~~~~~~gh~~~V~~va~~~s~d~ 279 (588)
T 2j04_A 256 SISSLKTGSLENFHIIPLNHEKES 279 (588)
T ss_dssp EEEEEECSCCSCCCEEEETTCSSC
T ss_pred eEEEEEcCCCceEEEEEeeeCCCC
Confidence 222333 99999999999 8874
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X | Back alignment and structure |
|---|
Probab=99.96 E-value=1.9e-28 Score=222.25 Aligned_cols=270 Identities=7% Similarity=0.016 Sum_probs=190.6
Q ss_pred ccccCceeeEecCCcccccCCCCccccccCcceeeec----cccCC-CCCcEEEEEEecCCC----c---cccccCCccc
Q psy4579 38 ALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKG----THTSD-EQNHLLIASVQLPNE----D---AQFDASNYDT 105 (368)
Q Consensus 38 ~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~----~~~~~-~~~~~~i~~~~~~~~----~---~~~~~~~~~~ 105 (368)
.+.-++.+++|+| ++|++++.||.+++|+.+.... ..... ......|.++.|.+. + ..+...
T Consensus 14 ~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~---- 87 (397)
T 1sq9_A 14 AHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATT---- 87 (397)
T ss_dssp CSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEE----
T ss_pred hhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEE----
Confidence 3567999999999 8999999999997776543320 01111 112234677777544 3 333322
Q ss_pred CCCCcccCCCCCeee------eeccccC-----CCCceeeEec----CCCCCe-eEEEeCCCcEEEEeCCC------CCC
Q psy4579 106 DKGGNVQLPNEDAQF------DASNYDT-----DKGGYGLSWN----PSLNGY-LLSASDDHTICLWDINA------TPK 163 (368)
Q Consensus 106 ~~~g~i~i~~~~~~~------~~~~~~h-----~~~v~~l~~s----p~~~~~-lasg~~dg~v~iwd~~~------~~~ 163 (368)
+.||.|++|+..... ...+..| ...|.+++|+ |++ .. |++|+.||.|++||+.+ ...
T Consensus 88 ~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 166 (397)
T 1sq9_A 88 SFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLL-SHRLVATDVKGTTYIWKFHPFADESNSLT 166 (397)
T ss_dssp ETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC-----CEEEEEEETTSCEEEEEEESSSSHHHHTT
T ss_pred cCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCC-ceEEEEEeCCCcEEEEeCCccccccccce
Confidence 358999999987644 5566677 5899999999 998 88 99999999999999987 432
Q ss_pred CCcccccceee-------eccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeec---c---
Q psy4579 164 ENRVIDAKTIF-------TGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTG---H--- 230 (368)
Q Consensus 164 ~~~~~~~~~~~-------~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~---~--- 230 (368)
.. ..+...+ ..|...+. +++|+|+ + +|++++.||.|++||++++ .++..+.. |
T Consensus 167 ~~--~~~~~~~~~~~~~~~~~~~~i~---~~~~~~~-~-~l~~~~~dg~i~i~d~~~~-------~~~~~~~~~~~h~~~ 232 (397)
T 1sq9_A 167 LN--WSPTLELQGTVESPMTPSQFAT---SVDISER-G-LIATGFNNGTVQISELSTL-------RPLYNFESQHSMINN 232 (397)
T ss_dssp TC--CCCEEEEEEEECCSSSSCCCCC---EEEECTT-S-EEEEECTTSEEEEEETTTT-------EEEEEEECCC---CC
T ss_pred ee--ccCcceeeeeeccccCCCCCce---EEEECCC-c-eEEEEeCCCcEEEEECCCC-------ceeEEEecccccccc
Confidence 10 1111155 34788885 9999998 7 9999999999999999886 45677777 8
Q ss_pred cccEeEEEEee--ecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecC----------
Q psy4579 231 TAVVEDYSIHR--LILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKIN---------- 298 (368)
Q Consensus 231 ~~~v~~v~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---------- 298 (368)
...|.+++|++ ..+.+++.+ ...+.+.+|+..+++....+. +
T Consensus 233 ~~~i~~i~~~~~~~~l~~~~~d-------------------------~~~g~i~i~d~~~~~~~~~~~-~~~~~~~~~~~ 286 (397)
T 1sq9_A 233 SNSIRSVKFSPQGSLLAIAHDS-------------------------NSFGCITLYETEFGERIGSLS-VPTHSSQASLG 286 (397)
T ss_dssp CCCEEEEEECSSTTEEEEEEEE-------------------------TTEEEEEEEETTTCCEEEEEC-BC--------C
T ss_pred CCccceEEECCCCCEEEEEecC-------------------------CCCceEEEEECCCCcccceec-cCccccccccc
Confidence 89999999986 222222222 000224444444555555544 4
Q ss_pred ---cccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeee------cc---------------cC
Q psy4579 299 ---HEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLR------GH---------------QK 354 (368)
Q Consensus 299 ---h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~------gh---------------~~ 354 (368)
|...|.+++|+|++ .+|++|+.||.|++||++. ..++..+. +| ..
T Consensus 287 ~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~----------~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 355 (397)
T 1sq9_A 287 EFAHSSWVMSLSFNDSG-ETLCSAGWDGKLRFWDVKT----------KERITTLNMHCDDIEIEEDILAVDEHGDSLAEP 355 (397)
T ss_dssp CBSBSSCEEEEEECSSS-SEEEEEETTSEEEEEETTT----------TEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSC
T ss_pred ccccCCcEEEEEECCCC-CEEEEEeCCCeEEEEEcCC----------CceeEEEecccCcccchhhhhccccccccccCC
Confidence 99999999999999 6888999999999999975 34455666 67 99
Q ss_pred ceeeecceeee
Q psy4579 355 EGLIEGTYNCY 365 (368)
Q Consensus 355 ~V~~l~w~p~~ 365 (368)
.|++++|+|..
T Consensus 356 ~v~~~~~~~~g 366 (397)
T 1sq9_A 356 GVFDVKFLKKG 366 (397)
T ss_dssp CEEEEEEECTT
T ss_pred ceeEEEecccc
Confidence 99999999973
|
| >3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A | Back alignment and structure |
|---|
Probab=99.96 E-value=7.5e-28 Score=211.93 Aligned_cols=230 Identities=16% Similarity=0.166 Sum_probs=167.1
Q ss_pred EEEEEEecCCCccccccCCcccCCCCcccCCCCCe---eeeeccccCCCCceeeEecCC--CCCeeEEEeCCCcEEEEeC
Q psy4579 84 LLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDA---QFDASNYDTDKGGYGLSWNPS--LNGYLLSASDDHTICLWDI 158 (368)
Q Consensus 84 ~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~---~~~~~~~~h~~~v~~l~~sp~--~~~~lasg~~dg~v~iwd~ 158 (368)
..|.++.|.+.+..+..+ +.||+|++|+... .....+.+|.+.|++++|+|. + ++||+|+.|++|++||+
T Consensus 14 ~~V~~v~~s~~g~~lasg----s~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~-~~l~s~s~D~~v~iWd~ 88 (316)
T 3bg1_A 14 DMIHDAQMDYYGTRLATC----SSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYG-NILASCSYDRKVIIWRE 88 (316)
T ss_dssp CCEEEEEECGGGCEEEEE----ETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGS-SCEEEEETTSCEEEECC
T ss_pred CeEEEeeEcCCCCEEEEE----eCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCC-CEEEEEECCCEEEEEEC
Confidence 347788886554443332 3699999999753 235567899999999999863 6 89999999999999999
Q ss_pred CCCCCCCcccccceeeeccccceecceeeEEeCCC-CCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEE
Q psy4579 159 NATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSL-NGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDY 237 (368)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~-~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v 237 (368)
+++.. .....+.+|...|. +++|+|+. +.+|++|+.|++|++||++.... +.....+.+|...|.++
T Consensus 89 ~~~~~-----~~~~~~~~h~~~V~---~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~----~~~~~~~~~h~~~v~~~ 156 (316)
T 3bg1_A 89 ENGTW-----EKSHEHAGHDSSVN---SVCWAPHDYGLILACGSSDGAISLLTYTGEGQ----WEVKKINNAHTIGCNAV 156 (316)
T ss_dssp SSSCC-----CEEEEECCCSSCCC---EEEECCTTTCSCEEEECSSSCEEEEEECSSSC----EEECCBTTSSSSCBCCC
T ss_pred CCCcc-----eEEEEccCCCCceE---EEEECCCCCCcEEEEEcCCCCEEEEecCCCCC----cceeeeeccccCCcceE
Confidence 87532 13467789999996 99999973 57899999999999999986521 11234566799999999
Q ss_pred EEeee-------------------cccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCC---ceeeee
Q psy4579 238 SIHRL-------------------ILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSG---KIEIEI 295 (368)
Q Consensus 238 ~~~~~-------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~---~~~~~~ 295 (368)
+|+|. .+++++.|+. +.+|+...+ .....+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~----------------------------v~lWd~~~~~~~~~~~~l 208 (316)
T 3bg1_A 157 SWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNL----------------------------IKLWKEEEDGQWKEEQKL 208 (316)
T ss_dssp EECCCCCC------CCSCCCCCCCBEECCBTTSB----------------------------CCEEEECTTSCEEEEECC
T ss_pred EEccccCCccccccccccCccccceEEEecCCCe----------------------------EEEEEeCCCCccceeeec
Confidence 99874 2333333333 444444332 122333
Q ss_pred ecCcccceeEEEEeCCC---CcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeecccCceeeecceeee
Q psy4579 296 KINHEGEVNRARYMPQN---PCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 296 ~~~h~~~i~~~~~~p~~---~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p~~ 365 (368)
.+|...|.+++|+|++ ..+||+|+.||+|++||++.... + ......+.+|.+.|++++|+|+.
T Consensus 209 -~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~-----~-~~~~~~~~~~~~~v~~v~~sp~g 274 (316)
T 3bg1_A 209 -EAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASS-----N-TWSPKLLHKFNDVVWHVSWSITA 274 (316)
T ss_dssp -BCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTC-----C-CCBCCEEEECSSCEEEEEECTTT
T ss_pred -ccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccc-----c-chhhhhhhcCCCcEEEEEEcCCC
Confidence 3899999999999986 35889999999999999974210 0 11122457899999999999975
|
| >3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.7e-28 Score=223.81 Aligned_cols=245 Identities=16% Similarity=0.109 Sum_probs=165.6
Q ss_pred ccCceeeEecCCcccccCCCCccccccCcceeeecc---------ccCCCCCc-------------EEEEEEecCCCc--
Q psy4579 40 EWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGT---------HTSDEQNH-------------LLIASVQLPNED-- 95 (368)
Q Consensus 40 ~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~-------------~~i~~~~~~~~~-- 95 (368)
.-+|.+++|+|++++|++|+.||.+.+|+....... .....+.+ ..|.++.|.+..
T Consensus 28 ~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~ 107 (447)
T 3dw8_B 28 ADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNA 107 (447)
T ss_dssp GGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSS
T ss_pred cCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCc
Confidence 468999999999999999999999977765432200 00011111 336667775543
Q ss_pred cccccCCcccCCCCcccCCCCCeeee-----------------------------------------eccccCCCCceee
Q psy4579 96 AQFDASNYDTDKGGNVQLPNEDAQFD-----------------------------------------ASNYDTDKGGYGL 134 (368)
Q Consensus 96 ~~~~~~~~~~~~~g~i~i~~~~~~~~-----------------------------------------~~~~~h~~~v~~l 134 (368)
..+.++ +.||.|++|+...... ....+|...|+++
T Consensus 108 ~~l~s~----s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~ 183 (447)
T 3dw8_B 108 AQFLLS----TNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSI 183 (447)
T ss_dssp SEEEEE----ECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEE
T ss_pred ceEEEe----CCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEE
Confidence 223322 3589999999865222 1135799999999
Q ss_pred EecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccce-------eeeccccceecceeeEEeCCCCCeEEEeeCCCcEE
Q psy4579 135 SWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKT-------IFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTIC 207 (368)
Q Consensus 135 ~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~-------~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~ 207 (368)
+|+|++ .+|++| .||.|++||+++... ... .+.+|...|. +++|+|++..+|++|+.||.|+
T Consensus 184 ~~~~~~-~~l~s~-~d~~i~iwd~~~~~~------~~~~~~~~~~~~~~~~~~v~---~~~~~p~~~~~l~s~~~dg~i~ 252 (447)
T 3dw8_B 184 SINSDY-ETYLSA-DDLRINLWHLEITDR------SFNIVDIKPANMEELTEVIT---AAEFHPNSCNTFVYSSSKGTIR 252 (447)
T ss_dssp EECTTS-SEEEEE-CSSEEEEEETTEEEE------EEEEEECCCSSGGGCCCCEE---EEEECSSCTTEEEEEETTSCEE
T ss_pred EEcCCC-CEEEEe-CCCeEEEEECCCCCc------eeeeeecccccccccCcceE---EEEECCCCCcEEEEEeCCCeEE
Confidence 999998 899998 799999999984321 112 3568999996 9999998339999999999999
Q ss_pred EEECCCCCCCCccccceeeeecccc------------cEeEEEEeee--cccccCCCCccceEEEEeecCCccccccccc
Q psy4579 208 LWDINATPKENRVIDAKTIFTGHTA------------VVEDYSIHRL--ILGTHTSDEQNHLLIASVQLPNEDAQFDASN 273 (368)
Q Consensus 208 iwd~~~~~~~~~~~~~~~~~~~~~~------------~v~~v~~~~~--~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 273 (368)
+||++++.... .....+.+|.. .|.+++|++. .+.+++. +.++
T Consensus 253 iwd~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~------------------- 309 (447)
T 3dw8_B 253 LCDMRASALCD---RHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVK------------------- 309 (447)
T ss_dssp EEETTTCSSSC---TTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEE-------------------
T ss_pred EEECcCCcccc---ceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEE-------------------
Confidence 99999874211 12456666665 8999999862 2333332 3333
Q ss_pred ccCCCCCcccccCCC-CceeeeeecCcccc---------------eeEEEEeCCCCcEEEEecCCCeEEEEECCCC
Q psy4579 274 YDTDKGDFGGFGSVS-GKIEIEIKINHEGE---------------VNRARYMPQNPCVIATKTPSSDVLVFDYTKH 333 (368)
Q Consensus 274 ~d~~~~~~~~~~~~~-~~~~~~~~~~h~~~---------------i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~ 333 (368)
+|+... ++....+. +|... +..++|+|++ .+|++|+.||.|++||+...
T Consensus 310 ---------iwd~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~-~~l~s~s~dg~v~iwd~~~~ 374 (447)
T 3dw8_B 310 ---------VWDLNMENRPVETYQ-VHEYLRSKLCSLYENDCIFDKFECCWNGSD-SVVMTGSYNNFFRMFDRNTK 374 (447)
T ss_dssp ---------EEETTCCSSCSCCEE-SCGGGTTTHHHHHHTSGGGCCCCEEECTTS-SEEEEECSTTEEEEEETTTC
T ss_pred ---------EEeCCCCccccceee-ccccccccccccccccccccceEEEECCCC-CEEEEeccCCEEEEEEcCCC
Confidence 333332 33333333 45431 3359999999 57789999999999999753
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.5e-27 Score=217.10 Aligned_cols=260 Identities=13% Similarity=0.201 Sum_probs=189.9
Q ss_pred hhhhhhhhhhcCcchheeecccccccCceeeEecCCcccccCCCCccccccCcceeeeccccCC-CCCcEEEEEEecCCC
Q psy4579 16 INEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSD-EQNHLLIASVQLPNE 94 (368)
Q Consensus 16 ~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~ 94 (368)
.+...++|+..+......+... ...++.+++|+|++++|++|+.+|.+.+|+.. .+..... ......+.++.+.
T Consensus 111 ~d~~v~lw~~~~~~~~~~~~~~-~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~--~~~~~~~~~~~~~~v~~~~~~-- 185 (401)
T 4aez_A 111 LERNVYVWNADSGSVSALAETD-ESTYVASVKWSHDGSFLSVGLGNGLVDIYDVE--SQTKLRTMAGHQARVGCLSWN-- 185 (401)
T ss_dssp ETTEEEEEETTTCCEEEEEECC-TTCCEEEEEECTTSSEEEEEETTSCEEEEETT--TCCEEEEECCCSSCEEEEEEE--
T ss_pred CCCeEEEeeCCCCcEeEeeecC-CCCCEEEEEECCCCCEEEEECCCCeEEEEECc--CCeEEEEecCCCCceEEEEEC--
Confidence 3556788888877655444332 56789999999999999999999999766543 3322222 1222345666662
Q ss_pred ccccccCCcccCCCCcccCCCCC--eeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccce
Q psy4579 95 DAQFDASNYDTDKGGNVQLPNED--AQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKT 172 (368)
Q Consensus 95 ~~~~~~~~~~~~~~g~i~i~~~~--~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~ 172 (368)
+ ...+.+ +.||.|++|+.. ......+..|...|.+++|+|++ .+|++|+.||.|++||++++. +..
T Consensus 186 ~-~~l~~~---~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~d~~v~iwd~~~~~-------~~~ 253 (401)
T 4aez_A 186 R-HVLSSG---SRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDG-LQLASGGNDNVVQIWDARSSI-------PKF 253 (401)
T ss_dssp T-TEEEEE---ETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTCSS-------EEE
T ss_pred C-CEEEEE---cCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCC-CEEEEEeCCCeEEEccCCCCC-------ccE
Confidence 1 222222 468999999986 34566778899999999999998 999999999999999998754 567
Q ss_pred eeeccccceecceeeEEeCCCCCeEEEee--CCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee--ecccc--
Q psy4579 173 IFTGHTAVVEVRYGLSWNPSLNGYLLSAS--DDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LILGT-- 246 (368)
Q Consensus 173 ~~~~h~~~v~~~~~i~~~p~~~~~l~s~s--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~-- 246 (368)
.+.+|...|. +++|+|++..++++|+ .|+.|++||++++ .+...+. +...|.+++|++ ..+.+
T Consensus 254 ~~~~~~~~v~---~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~-------~~~~~~~-~~~~v~~~~~s~~~~~l~~~~ 322 (401)
T 4aez_A 254 TKTNHNAAVK---AVAWCPWQSNLLATGGGTMDKQIHFWNAATG-------ARVNTVD-AGSQVTSLIWSPHSKEIMSTH 322 (401)
T ss_dssp EECCCSSCCC---EEEECTTSTTEEEEECCTTTCEEEEEETTTC-------CEEEEEE-CSSCEEEEEECSSSSEEEEEE
T ss_pred EecCCcceEE---EEEECCCCCCEEEEecCCCCCEEEEEECCCC-------CEEEEEe-CCCcEEEEEECCCCCeEEEEe
Confidence 7888999996 9999998677888876 8999999999887 3445554 667899999986 22222
Q ss_pred cCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeee-eecCcccceeEEEEeCCCCcEEEEecCCCeE
Q psy4579 247 HTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIE-IKINHEGEVNRARYMPQNPCVIATKTPSSDV 325 (368)
Q Consensus 247 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~-~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i 325 (368)
+..++.+++|.. .++..... ...+|...|.+++|+|++ .+|++++.||.|
T Consensus 323 g~~dg~i~v~~~----------------------------~~~~~~~~~~~~~h~~~v~~~~~s~dg-~~l~s~~~dg~i 373 (401)
T 4aez_A 323 GFPDNNLSIWSY----------------------------SSSGLTKQVDIPAHDTRVLYSALSPDG-RILSTAASDENL 373 (401)
T ss_dssp CTTTCEEEEEEE----------------------------ETTEEEEEEEEECCSSCCCEEEECTTS-SEEEEECTTSEE
T ss_pred ecCCCcEEEEec----------------------------CCccceeEEEecCCCCCEEEEEECCCC-CEEEEEeCCCcE
Confidence 334444444432 23322222 123899999999999999 688899999999
Q ss_pred EEEECCC
Q psy4579 326 LVFDYTK 332 (368)
Q Consensus 326 ~iwd~~~ 332 (368)
++||+..
T Consensus 374 ~iw~~~~ 380 (401)
T 4aez_A 374 KFWRVYD 380 (401)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 9999975
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C | Back alignment and structure |
|---|
Probab=99.95 E-value=1.6e-27 Score=214.08 Aligned_cols=249 Identities=10% Similarity=0.099 Sum_probs=180.4
Q ss_pred cccCceeeEecCCcccccCCCCccccccCcceeeecc--ccCC-CCCcEEEEEEecCCCccccccCCcccCCCCcccCCC
Q psy4579 39 LEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGT--HTSD-EQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPN 115 (368)
Q Consensus 39 ~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~ 115 (368)
.+-|+.+++|+|++++|++++.++.+.+|+. ..+. .... ......|.++.+.+.+..+... +.||.|++|+
T Consensus 7 ~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~--~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~----~~dg~i~vwd 80 (372)
T 1k8k_C 7 LVEPISCHAWNKDRTQIAICPNNHEVHIYEK--SGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTC----GTDRNAYVWT 80 (372)
T ss_dssp CSSCCCEEEECTTSSEEEEECSSSEEEEEEE--ETTEEEEEEEEECCSSCEEEEEEETTTTEEEEE----ETTSCEEEEE
T ss_pred cCCCeEEEEECCCCCEEEEEeCCCEEEEEeC--CCCcEEeeeeecCCCCcccEEEEeCCCCEEEEE----cCCCeEEEEE
Confidence 4568999999999999999999999966654 3332 2222 1122357777775544433332 3589999999
Q ss_pred CCeee---eeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCC
Q psy4579 116 EDAQF---DASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPS 192 (368)
Q Consensus 116 ~~~~~---~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~ 192 (368)
..... ......|...|.+++|+|++ .+|++|+.||.|++||++...... .......+|...+. +++|+|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~v~i~d~~~~~~~~---~~~~~~~~~~~~i~---~~~~~~~ 153 (372)
T 1k8k_C 81 LKGRTWKPTLVILRINRAARCVRWAPNE-KKFAVGSGSRVISICYFEQENDWW---VCKHIKKPIRSTVL---SLDWHPN 153 (372)
T ss_dssp EETTEEEEEEECCCCSSCEEEEEECTTS-SEEEEEETTSSEEEEEEETTTTEE---EEEEECTTCCSCEE---EEEECTT
T ss_pred CCCCeeeeeEEeecCCCceeEEEECCCC-CEEEEEeCCCEEEEEEecCCCcce---eeeeeecccCCCee---EEEEcCC
Confidence 86532 34457799999999999998 999999999999999998764210 01233357888886 9999998
Q ss_pred CCCeEEEeeCCCcEEEEECCCCCCC-----------CccccceeeeecccccEeEEEEeee--cccccCCCCccceEEEE
Q psy4579 193 LNGYLLSASDDHTICLWDINATPKE-----------NRVIDAKTIFTGHTAVVEDYSIHRL--ILGTHTSDEQNHLLIAS 259 (368)
Q Consensus 193 ~~~~l~s~s~dg~i~iwd~~~~~~~-----------~~~~~~~~~~~~~~~~v~~v~~~~~--~~~~~~~d~~~~~~~~~ 259 (368)
+.+|++|+.||.|++||++..... .....++..+.+|...|.+++|++. .+.+++.|
T Consensus 154 -~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------- 223 (372)
T 1k8k_C 154 -SVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHD--------- 223 (372)
T ss_dssp -SSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETT---------
T ss_pred -CCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCC---------
Confidence 899999999999999997532111 0011446677789999999999862 33333332
Q ss_pred eecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCC
Q psy4579 260 VQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 260 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
+.+.+|+..+++....+. .|...|.+++|+|++ .+|++| .|+.|++|+++.
T Consensus 224 -------------------~~i~i~d~~~~~~~~~~~-~~~~~v~~~~~~~~~-~~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 224 -------------------STVCLADADKKMAVATLA-SETLPLLAVTFITES-SLVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp -------------------TEEEEEEGGGTTEEEEEE-CSSCCEEEEEEEETT-EEEEEE-TTSSCEEEEEET
T ss_pred -------------------CEEEEEECCCCceeEEEc-cCCCCeEEEEEecCC-CEEEEE-eCCeEEEEEccC
Confidence 234445555666666665 799999999999999 688776 999999999976
|
| >3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.95 E-value=8.8e-28 Score=216.02 Aligned_cols=251 Identities=15% Similarity=0.144 Sum_probs=185.6
Q ss_pred ccccCceeeEecCCcccccCCCCccccccCcceeeeccccCC-CCCcEEEEEEecCCC-ccccccCCcccCCCCcccCCC
Q psy4579 38 ALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSD-EQNHLLIASVQLPNE-DAQFDASNYDTDKGGNVQLPN 115 (368)
Q Consensus 38 ~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~g~i~i~~ 115 (368)
.+.-++.+++|+|++++|++++.||.+.+|+.....+..... ......|.++.|.+. +....+++ +.||.|++|+
T Consensus 9 ~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~---~~dg~v~iwd 85 (379)
T 3jrp_A 9 AHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASC---SYDGKVLIWK 85 (379)
T ss_dssp ECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEE---ETTSCEEEEE
T ss_pred CCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEe---ccCCEEEEEE
Confidence 356689999999999999999999999777664223333222 122345777887433 23333333 3589999999
Q ss_pred CCee---eeeccccCCCCceeeEecCC--CCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEe
Q psy4579 116 EDAQ---FDASNYDTDKGGYGLSWNPS--LNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWN 190 (368)
Q Consensus 116 ~~~~---~~~~~~~h~~~v~~l~~sp~--~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~ 190 (368)
.... .......|...|.+++|+|+ + .+|++++.||.|++||+...... ....+.+|...+. +++|+
T Consensus 86 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~l~~~~~d~~i~v~d~~~~~~~-----~~~~~~~~~~~v~---~~~~~ 156 (379)
T 3jrp_A 86 EENGRWSQIAVHAVHSASVNSVQWAPHEYG-PLLLVASSDGKVSVVEFKENGTT-----SPIIIDAHAIGVN---SASWA 156 (379)
T ss_dssp EETTEEEEEEEECCCSSCEEEEEECCGGGC-SEEEEEETTSEEEEEECCTTSCC-----CEEEEECCTTCEE---EEEEC
T ss_pred cCCCceeEeeeecCCCcceEEEEeCCCCCC-CEEEEecCCCcEEEEecCCCCce-----eeEEecCCCCceE---EEEEc
Confidence 8653 55667779999999999999 7 89999999999999999876432 3456778999996 99999
Q ss_pred CC------------CCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeee-----cccccCCCCcc
Q psy4579 191 PS------------LNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRL-----ILGTHTSDEQN 253 (368)
Q Consensus 191 p~------------~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~-----~~~~~~~d~~~ 253 (368)
|. ++.+|++|+.||.|++||++.+... ..+...+.+|...|.+++|+|. .+++++.|+.+
T Consensus 157 ~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~---~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i 233 (379)
T 3jrp_A 157 PATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQT---YVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTC 233 (379)
T ss_dssp CCC----------CTTCEEEEEETTSCEEEEEEETTTTE---EEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCE
T ss_pred CccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcc---eeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEE
Confidence 93 3899999999999999999876422 1345677889999999999863 45666666655
Q ss_pred ceEEEEeecCCcccccccccccCCCCCcccccCCCCc----eeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEE
Q psy4579 254 HLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGK----IEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFD 329 (368)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~----~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd 329 (368)
++|... ++. ........|...|.+++|+|++ .+|++++.||.|++|+
T Consensus 234 ~iwd~~----------------------------~~~~~~~~~~~~~~~~~~~v~~~~~s~~g-~~l~~~~~dg~i~iw~ 284 (379)
T 3jrp_A 234 IIWTQD----------------------------NEQGPWKKTLLKEEKFPDVLWRASWSLSG-NVLALSGGDNKVTLWK 284 (379)
T ss_dssp EEEEES----------------------------STTSCCEEEESSSSCCSSCEEEEEECSSS-CCEEEEESSSSEEEEE
T ss_pred EEEeCC----------------------------CCCccceeeeeccccCCCcEEEEEEcCCC-CEEEEecCCCcEEEEe
Confidence 555332 221 1111112588999999999999 5777889999999999
Q ss_pred CCC
Q psy4579 330 YTK 332 (368)
Q Consensus 330 ~~~ 332 (368)
++.
T Consensus 285 ~~~ 287 (379)
T 3jrp_A 285 ENL 287 (379)
T ss_dssp EEE
T ss_pred CCC
Confidence 974
|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.3e-27 Score=221.58 Aligned_cols=279 Identities=11% Similarity=0.122 Sum_probs=206.2
Q ss_pred hhhhhhhhhcCcchheeecccccccCceeeEecCCcccccCCCCccccccCcceeeeccccCC-CCCcEEEEEEecCC-C
Q psy4579 17 NEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSD-EQNHLLIASVQLPN-E 94 (368)
Q Consensus 17 ~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~-~ 94 (368)
+...++|+..+..+...+. .+..++.+++|+|++ .+++|+.||.+.+|+.+ .+..... ......|.++.+.+ .
T Consensus 141 dg~i~vwd~~~~~~~~~~~--~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~--~~~~~~~~~~h~~~v~~l~~~~~~ 215 (464)
T 3v7d_B 141 DKMIRVYDSINKKFLLQLS--GHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIK--KGCCTHVFEGHNSTVRCLDIVEYK 215 (464)
T ss_dssp TSCEEEEETTTTEEEEEEC--CCSSCEEEEEECSTT-EEEEEETTSCEEEEETT--TTEEEEEECCCSSCEEEEEEEESS
T ss_pred CCcEEEEECCCCcEEEEEe--CCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECC--CCcEEEEECCCCCccEEEEEecCC
Confidence 4567888887776655554 346689999999998 88999999999776554 3333222 11223455565532 2
Q ss_pred ccccccCCcccCCCCcccCCCCCeee------------------------eeccccCCCCceeeEecCCCCCeeEEEeCC
Q psy4579 95 DAQFDASNYDTDKGGNVQLPNEDAQF------------------------DASNYDTDKGGYGLSWNPSLNGYLLSASDD 150 (368)
Q Consensus 95 ~~~~~~~~~~~~~~g~i~i~~~~~~~------------------------~~~~~~h~~~v~~l~~sp~~~~~lasg~~d 150 (368)
+....+++ +.||.|++|+..... .....+|...|.++ ++++ +++++|+.|
T Consensus 216 ~~~~l~s~---s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~-~~l~~~~~d 289 (464)
T 3v7d_B 216 NIKYIVTG---SRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHG-NIVVSGSYD 289 (464)
T ss_dssp SCEEEEEE---ETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEET-TEEEEEETT
T ss_pred CCCEEEEE---cCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCC-CEEEEEeCC
Confidence 22223222 358999999976432 34566788888887 5666 899999999
Q ss_pred CcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecc
Q psy4579 151 HTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGH 230 (368)
Q Consensus 151 g~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 230 (368)
|.|++||+.++. +...+.+|...+. +++|+|+ +.++++|+.||.|++||++++ .++..+.+|
T Consensus 290 ~~i~vwd~~~~~-------~~~~~~~~~~~v~---~~~~~~~-~~~l~sg~~dg~i~vwd~~~~-------~~~~~~~~h 351 (464)
T 3v7d_B 290 NTLIVWDVAQMK-------CLYILSGHTDRIY---STIYDHE-RKRCISASMDTTIRIWDLENG-------ELMYTLQGH 351 (464)
T ss_dssp SCEEEEETTTTE-------EEEEECCCSSCEE---EEEEETT-TTEEEEEETTSCEEEEETTTT-------EEEEEECCC
T ss_pred CeEEEEECCCCc-------EEEEecCCCCCEE---EEEEcCC-CCEEEEEeCCCcEEEEECCCC-------cEEEEEeCC
Confidence 999999998764 5678889999995 9999998 899999999999999999887 567788899
Q ss_pred cccEeEEEEeeecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeC
Q psy4579 231 TAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMP 310 (368)
Q Consensus 231 ~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p 310 (368)
...|.+++|++..+.+++.|+.+++|. ..++...... .|...+..++|+|
T Consensus 352 ~~~v~~~~~~~~~l~s~s~dg~v~vwd----------------------------~~~~~~~~~~--~~~~~~~~~~~~~ 401 (464)
T 3v7d_B 352 TALVGLLRLSDKFLVSAAADGSIRGWD----------------------------ANDYSRKFSY--HHTNLSAITTFYV 401 (464)
T ss_dssp SSCEEEEEECSSEEEEEETTSEEEEEE----------------------------TTTCCEEEEE--ECTTCCCEEEEEE
T ss_pred CCcEEEEEEcCCEEEEEeCCCcEEEEE----------------------------CCCCceeeee--cCCCCccEEEEEe
Confidence 999999999987777777666655542 2223333332 4677888899999
Q ss_pred CCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCcee-eecccCceeeecceeeee
Q psy4579 311 QNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLR-LRGHQKEGLIEGTYNCYL 366 (368)
Q Consensus 311 ~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~-~~gh~~~V~~l~w~p~~~ 366 (368)
++ .++++|+ ||.|++||++. ...+.. +.+|.+.|++++|++..+
T Consensus 402 ~~-~~l~~~~-dg~i~iwd~~~----------g~~~~~~~~~~~~~v~~v~~~~~~l 446 (464)
T 3v7d_B 402 SD-NILVSGS-ENQFNIYNLRS----------GKLVHANILKDADQIWSVNFKGKTL 446 (464)
T ss_dssp CS-SEEEEEE-TTEEEEEETTT----------CCEEESCTTTTCSEEEEEEEETTEE
T ss_pred CC-CEEEEec-CCeEEEEECCC----------CcEEehhhccCCCcEEEEEecCCEE
Confidence 99 6887887 99999999975 233332 568899999999986553
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A | Back alignment and structure |
|---|
Probab=99.95 E-value=4.3e-28 Score=221.62 Aligned_cols=292 Identities=9% Similarity=0.018 Sum_probs=200.0
Q ss_pred hhhhhhhhhcCcchheeecccccccCceeeEecCCcccccCCCCccccccCcceeeeccccCCC-CCcEEEEEEecCCCc
Q psy4579 17 NEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDE-QNHLLIASVQLPNED 95 (368)
Q Consensus 17 ~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~ 95 (368)
+...++|+.........+..+ -.+....|+|++++|++++.|+.+.+|+... +...... .....|.++.+.+.+
T Consensus 77 d~~v~i~d~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~--~~~~~~~~~h~~~v~~~~~~~~~ 151 (420)
T 3vl1_A 77 DGHDFLFNTIIRDGSKMLKRA---DYTAVDTAKLQMRRFILGTTEGDIKVLDSNF--NLQREIDQAHVSEITKLKFFPSG 151 (420)
T ss_dssp TTEEEEEECCSEETTTTSCSC---CEEEEEEECSSSCEEEEEETTSCEEEECTTS--CEEEEETTSSSSCEEEEEECTTS
T ss_pred CCcEEEEEecccceeeEEecC---CceEEEEEecCCCEEEEEECCCCEEEEeCCC--cceeeecccccCccEEEEECCCC
Confidence 445677877766554444333 2234457899999999999999997776543 3322221 223457888886554
Q ss_pred cccccCCcccCCCCcccCCCCCe-eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceee
Q psy4579 96 AQFDASNYDTDKGGNVQLPNEDA-QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIF 174 (368)
Q Consensus 96 ~~~~~~~~~~~~~g~i~i~~~~~-~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~ 174 (368)
..+..+ +.||.|++|+... +....+.+|...|++++|+|++ .+|++|+.||.|++||++++. ....+
T Consensus 152 ~~l~s~----s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~d~~v~iwd~~~~~-------~~~~~ 219 (420)
T 3vl1_A 152 EALISS----SQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRG-RNVLSASLDGTIRLWECGTGT-------TIHTF 219 (420)
T ss_dssp SEEEEE----ETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTT-TEEEEEETTSCEEEEETTTTE-------EEEEE
T ss_pred CEEEEE----eCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCC-CEEEEEcCCCcEEEeECCCCc-------eeEEe
Confidence 433332 3589999999864 5566677899999999999998 999999999999999998764 33444
Q ss_pred ecc------------------------ccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecc
Q psy4579 175 TGH------------------------TAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGH 230 (368)
Q Consensus 175 ~~h------------------------~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 230 (368)
..| ...+. +++|+|+ +.+|++|+.||.|++||++++.. ......+|
T Consensus 220 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~---~~~~s~~-~~~l~~~~~dg~i~i~d~~~~~~------~~~~~~~~ 289 (420)
T 3vl1_A 220 NRKENPHDGVNSIALFVGTDRQLHEISTSKKN---NLEFGTY-GKYVIAGHVSGVITVHNVFSKEQ------TIQLPSKF 289 (420)
T ss_dssp CBTTBTTCCEEEEEEEECCCSSCGGGCCCCCC---TTCSSCT-TEEEEEEETTSCEEEEETTTCCE------EEEECCTT
T ss_pred ecCCCCCCCccEEEEecCCcceeeecccCccc---ceEEcCC-CCEEEEEcCCCeEEEEECCCCce------eEEccccc
Confidence 432 34443 6778888 89999999999999999988731 22333458
Q ss_pred cccEeEEEEeee---cccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCce-eeeeecCcccceeEE
Q psy4579 231 TAVVEDYSIHRL---ILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKI-EIEIKINHEGEVNRA 306 (368)
Q Consensus 231 ~~~v~~v~~~~~---~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~~~~~~h~~~i~~~ 306 (368)
...|.+++|++. ++.+++.|+.+++ |+..+++. ...+...|...|.++
T Consensus 290 ~~~v~~~~~~~~~~~~l~~g~~dg~i~v----------------------------wd~~~~~~~~~~~~~~~~~~v~~~ 341 (420)
T 3vl1_A 290 TCSCNSLTVDGNNANYIYAGYENGMLAQ----------------------------WDLRSPECPVGEFLINEGTPINNV 341 (420)
T ss_dssp SSCEEEEEECSSCTTEEEEEETTSEEEE----------------------------EETTCTTSCSEEEEESTTSCEEEE
T ss_pred CCCceeEEEeCCCCCEEEEEeCCCeEEE----------------------------EEcCCCcCchhhhhccCCCCceEE
Confidence 889999999863 4555554444443 33333433 334443477788888
Q ss_pred EEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeecccCceeeecceeeee
Q psy4579 307 RYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYNCYL 366 (368)
Q Consensus 307 ~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p~~~ 366 (368)
.| |++ .+|++++.||+|++||+....... ..........+.+|.+.|.+++|+|...
T Consensus 342 ~~-~~~-~~l~s~~~d~~v~iw~~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 398 (420)
T 3vl1_A 342 YF-AAG-ALFVSSGFDTSIKLDIISDPESER-PAIEFETPTFLVSNDDAVSQFCYVSDDE 398 (420)
T ss_dssp EE-ETT-EEEEEETTTEEEEEEEECCTTCCS-CEECTTSCEEECCSSCCCCEEEEECCSS
T ss_pred Ee-CCC-CEEEEecCCccEEEEeccCCCCCc-cceeccCccEEccCCcceEEEEEccCCC
Confidence 55 466 588899999999999997632111 1111122234678999999999999753
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A | Back alignment and structure |
|---|
Probab=99.95 E-value=4.1e-27 Score=208.24 Aligned_cols=264 Identities=13% Similarity=0.123 Sum_probs=196.1
Q ss_pred cccccCceeeEecCCcccccCCCCccccccCcceeeeccccCC----CCCcEEEEEEecCCCccccccCCcccCCCCccc
Q psy4579 37 HALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSD----EQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQ 112 (368)
Q Consensus 37 ~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~ 112 (368)
..+..++.+++|+|+++++++++ ++.+.+|+........... ......+.++.+.+.+..+... +.+|.|+
T Consensus 48 ~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~----~~d~~i~ 122 (337)
T 1gxr_A 48 LNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVG----GEASTLS 122 (337)
T ss_dssp ECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEE----ESSSEEE
T ss_pred ccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEE----cCCCcEE
Confidence 34677899999999999999998 9998776554321111111 1233457788886655444332 3589999
Q ss_pred CCCCCee---eeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEE
Q psy4579 113 LPNEDAQ---FDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSW 189 (368)
Q Consensus 113 i~~~~~~---~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~ 189 (368)
+|+.... ....+..|...|.+++|+|++ ++|++++.||.|++||++++. ....+.+|...+. +++|
T Consensus 123 ~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~v~~~d~~~~~-------~~~~~~~~~~~i~---~~~~ 191 (337)
T 1gxr_A 123 IWDLAAPTPRIKAELTSSAPACYALAISPDS-KVCFSCCSDGNIAVWDLHNQT-------LVRQFQGHTDGAS---CIDI 191 (337)
T ss_dssp EEECCCC--EEEEEEECSSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTTE-------EEEEECCCSSCEE---EEEE
T ss_pred EEECCCCCcceeeecccCCCceEEEEECCCC-CEEEEEeCCCcEEEEeCCCCc-------eeeeeecccCceE---EEEE
Confidence 9998753 355667799999999999998 899999999999999998763 5677888999996 9999
Q ss_pred eCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee--ecccccCCCCccceEE----------
Q psy4579 190 NPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LILGTHTSDEQNHLLI---------- 257 (368)
Q Consensus 190 ~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~d~~~~~~~---------- 257 (368)
+|+ +.+|++++.||.|++||++++. ....+ .+...+.+++|++ ..+.+++.++.+++|.
T Consensus 192 ~~~-~~~l~~~~~dg~i~~~d~~~~~-------~~~~~-~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~~~ 262 (337)
T 1gxr_A 192 SND-GTKLWTGGLDNTVRSWDLREGR-------QLQQH-DFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLH 262 (337)
T ss_dssp CTT-SSEEEEEETTSEEEEEETTTTE-------EEEEE-ECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEEC
T ss_pred CCC-CCEEEEEecCCcEEEEECCCCc-------eEeee-cCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeEEEc
Confidence 998 8999999999999999998862 33333 3677899999975 3555666666666653
Q ss_pred ------EEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECC
Q psy4579 258 ------ASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYT 331 (368)
Q Consensus 258 ------~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~ 331 (368)
..+.+.++...+.... ..+.+.+|+..+++..... .|...|.+++|+|++ .+|++++.||.|++||+.
T Consensus 263 ~~~~~v~~~~~~~~~~~l~~~~---~dg~i~~~~~~~~~~~~~~--~~~~~v~~~~~s~~~-~~l~~~~~dg~i~iw~~~ 336 (337)
T 1gxr_A 263 LHESCVLSLKFAYCGKWFVSTG---KDNLLNAWRTPYGASIFQS--KESSSVLSCDISVDD-KYIVTGSGDKKATVYEVI 336 (337)
T ss_dssp CCSSCEEEEEECTTSSEEEEEE---TTSEEEEEETTTCCEEEEE--ECSSCEEEEEECTTS-CEEEEEETTSCEEEEEEE
T ss_pred CCccceeEEEECCCCCEEEEec---CCCcEEEEECCCCeEEEEe--cCCCcEEEEEECCCC-CEEEEecCCCeEEEEEEe
Confidence 2233333333332222 3456888888888776443 589999999999999 678899999999999973
|
| >3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.9e-27 Score=231.44 Aligned_cols=270 Identities=15% Similarity=0.136 Sum_probs=193.4
Q ss_pred ccccCceeeEecCCc-ccccCCCCccccccCcceeee---ccccCC-CCCcEEEEEEecCCCccccccCCcccCCCCccc
Q psy4579 38 ALEWPSLTAQWLPDV-TSVQLPNEDAQFDASNYDTDK---GTHTSD-EQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQ 112 (368)
Q Consensus 38 ~~~~~~~~~~~~p~~-~~l~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~ 112 (368)
.+.-+|.+++|+|++ +.|++|+.|+.+++|+..... +..... ..+...|.++.+.+++..+... +.||.|+
T Consensus 380 ~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sg----s~Dg~v~ 455 (694)
T 3dm0_A 380 AHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSG----SWDGELR 455 (694)
T ss_dssp CCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEE----ETTSEEE
T ss_pred cCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEE----eCCCcEE
Confidence 456789999999875 689999999999777654221 111111 1122347777786655444332 3589999
Q ss_pred CCCCCe-eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeC
Q psy4579 113 LPNEDA-QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNP 191 (368)
Q Consensus 113 i~~~~~-~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p 191 (368)
+|+... .....+.+|.+.|++++|+|++ .+|++|+.|++|++||+...... .......+|...|. +++|+|
T Consensus 456 vwd~~~~~~~~~~~~h~~~v~~~~~s~~~-~~l~s~s~D~~i~iwd~~~~~~~----~~~~~~~~h~~~v~---~~~~~~ 527 (694)
T 3dm0_A 456 LWDLAAGVSTRRFVGHTKDVLSVAFSLDN-RQIVSASRDRTIKLWNTLGECKY----TISEGGEGHRDWVS---CVRFSP 527 (694)
T ss_dssp EEETTTTEEEEEEECCSSCEEEEEECTTS-SCEEEEETTSCEEEECTTSCEEE----EECSSTTSCSSCEE---EEEECS
T ss_pred EEECCCCcceeEEeCCCCCEEEEEEeCCC-CEEEEEeCCCEEEEEECCCCcce----eeccCCCCCCCcEE---EEEEeC
Confidence 999864 5566778899999999999998 99999999999999998653110 01112246888886 999999
Q ss_pred CC-CCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee--ecccccCCCCccceEEE----------
Q psy4579 192 SL-NGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LILGTHTSDEQNHLLIA---------- 258 (368)
Q Consensus 192 ~~-~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~d~~~~~~~~---------- 258 (368)
+. ...|++|+.|++|++||+++. .....+.+|...|++++|++ ..+++++.|+.+++|..
T Consensus 528 ~~~~~~l~s~s~d~~v~vwd~~~~-------~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~ 600 (694)
T 3dm0_A 528 NTLQPTIVSASWDKTVKVWNLSNC-------KLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLE 600 (694)
T ss_dssp CSSSCEEEEEETTSCEEEEETTTC-------CEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCB
T ss_pred CCCcceEEEEeCCCeEEEEECCCC-------cEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEec
Confidence 73 258999999999999999886 45677889999999999986 57888888999988842
Q ss_pred ------EeecCCcccccccccccCCCCCcccccCCCCceeeeeecC------------------cccceeEEEEeCCCCc
Q psy4579 259 ------SVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKIN------------------HEGEVNRARYMPQNPC 314 (368)
Q Consensus 259 ------~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~------------------h~~~i~~~~~~p~~~~ 314 (368)
.+.+.++...+ +.. ..+.+.+|+..+++....+... +...+++++|+|++ .
T Consensus 601 ~~~~v~~~~~sp~~~~l-~~~---~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg-~ 675 (694)
T 3dm0_A 601 ANSVIHALCFSPNRYWL-CAA---TEHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADG-S 675 (694)
T ss_dssp CSSCEEEEEECSSSSEE-EEE---ETTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTS-S
T ss_pred CCCcEEEEEEcCCCcEE-EEE---cCCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCC-C
Confidence 22222222111 111 1234778888887766544311 11237899999999 6
Q ss_pred EEEEecCCCeEEEEECC
Q psy4579 315 VIATKTPSSDVLVFDYT 331 (368)
Q Consensus 315 ~lasgs~Dg~i~iwd~~ 331 (368)
+|+||+.||+|++||+.
T Consensus 676 ~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 676 TLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp EEEEEETTSEEEEEEC-
T ss_pred EEEEEcCCCeEEEEecc
Confidence 88899999999999986
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a | Back alignment and structure |
|---|
Probab=99.95 E-value=1.8e-27 Score=211.02 Aligned_cols=272 Identities=11% Similarity=0.084 Sum_probs=181.7
Q ss_pred hhhhhhhhhhcCcchheeec---ccccccCceeeEecCCcccccCCCCccccccCcceeeeccccCCCCCcEEEEEEecC
Q psy4579 16 INEEYKIWKKNTPFLYDLVM---THALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQNHLLIASVQLP 92 (368)
Q Consensus 16 ~~~~~~~w~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 92 (368)
.+...++|+........... ...+..++.+++|+|++++|++++.|+.+.+|............... ..+....+.
T Consensus 59 ~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 137 (340)
T 4aow_A 59 RDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHT-KDVLSVAFS 137 (340)
T ss_dssp TTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCS-SCEEEEEEC
T ss_pred CCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeecccceeeeecCCC-CceeEEEEe
Confidence 45678899876543211111 12245689999999999999999999998666544332222222211 122333343
Q ss_pred CCccccccCCcccCCCCcccCCCCCe--eeeeccccCCCCceeeEecCCCC-CeeEEEeCCCcEEEEeCCCCCCCCcccc
Q psy4579 93 NEDAQFDASNYDTDKGGNVQLPNEDA--QFDASNYDTDKGGYGLSWNPSLN-GYLLSASDDHTICLWDINATPKENRVID 169 (368)
Q Consensus 93 ~~~~~~~~~~~~~~~~g~i~i~~~~~--~~~~~~~~h~~~v~~l~~sp~~~-~~lasg~~dg~v~iwd~~~~~~~~~~~~ 169 (368)
+....+... +.||.+++|+... .......+|...|.+++|++++. .++++++.|+.|++||+.+..
T Consensus 138 ~~~~~l~s~----s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~------- 206 (340)
T 4aow_A 138 SDNRQIVSG----SRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCK------- 206 (340)
T ss_dssp TTSSCEEEE----ETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTE-------
T ss_pred ecCccceee----cCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCc-------
Confidence 333333222 3589999999865 33455678999999999998753 467899999999999998764
Q ss_pred cceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeee-cccccC
Q psy4579 170 AKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRL-ILGTHT 248 (368)
Q Consensus 170 ~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~-~~~~~~ 248 (368)
....+.+|.+.|. +++|+|+ +.+|++|+.||.|++||+++. .++..+. +...|.++.|++. .+.+++
T Consensus 207 ~~~~~~~h~~~v~---~~~~s~~-~~~l~s~s~Dg~i~iwd~~~~-------~~~~~~~-~~~~v~~~~~~~~~~~~~~~ 274 (340)
T 4aow_A 207 LKTNHIGHTGYLN---TVTVSPD-GSLCASGGKDGQAMLWDLNEG-------KHLYTLD-GGDIINALCFSPNRYWLCAA 274 (340)
T ss_dssp EEEEECCCSSCEE---EEEECTT-SSEEEEEETTCEEEEEETTTT-------EEEEEEE-CSSCEEEEEECSSSSEEEEE
T ss_pred eeeEecCCCCcEE---EEEECCC-CCEEEEEeCCCeEEEEEeccC-------ceeeeec-CCceEEeeecCCCCceeecc
Confidence 5678889999996 9999998 999999999999999999886 3455555 4467889999762 222333
Q ss_pred CCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEE
Q psy4579 249 SDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVF 328 (368)
Q Consensus 249 ~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iw 328 (368)
.++.+++|.. +.+.. .... ..........+|...|++++|+|++ .+|+||+.||+|+||
T Consensus 275 ~d~~i~iwd~------------------~~~~~-~~~~-~~~~~~~~~~~h~~~v~~l~~s~dg-~~l~sgs~Dg~v~iW 333 (340)
T 4aow_A 275 TGPSIKIWDL------------------EGKII-VDEL-KQEVISTSSKAEPPQCTSLAWSADG-QTLFAGYTDNLVRVW 333 (340)
T ss_dssp ETTEEEEEET------------------TTTEE-EEEE-CCC-------CCCCCEEEEEECTTS-SEEEEEETTSCEEEE
T ss_pred CCCEEEEEEC------------------CCCeE-EEec-cccceeeeccCCCCCEEEEEECCCC-CEEEEEeCCCEEEEE
Confidence 3444443321 11000 0000 0111111223789999999999999 688899999999999
Q ss_pred ECCC
Q psy4579 329 DYTK 332 (368)
Q Consensus 329 d~~~ 332 (368)
|+++
T Consensus 334 ~~~t 337 (340)
T 4aow_A 334 QVTI 337 (340)
T ss_dssp EEEC
T ss_pred eCCC
Confidence 9975
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.95 E-value=9.9e-28 Score=216.13 Aligned_cols=293 Identities=10% Similarity=0.087 Sum_probs=184.5
Q ss_pred hhhhhhhhhcCc--chheeecccccccCceeeEecCCcccccCCCCccccccCcceeee-ccccCC-CCCcEEEEEEecC
Q psy4579 17 NEEYKIWKKNTP--FLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDK-GTHTSD-EQNHLLIASVQLP 92 (368)
Q Consensus 17 ~~~~~~w~~~~~--~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~i~~~~~~ 92 (368)
+...++|+.... .+...+. .+..++.+++|+|++++|++++.|+.+++|+..... ...... ......|.++.+.
T Consensus 32 d~~i~iw~~~~~~~~~~~~~~--~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~ 109 (377)
T 3dwl_C 32 TNQVELYEQDGNGWKHARTFS--DHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWS 109 (377)
T ss_dssp SSCBCEEEEETTEEEECCCBC--CCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECC
T ss_pred CCEEEEEEccCCceEEEEEEe--cCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEEC
Confidence 456788888765 3333333 346689999999999999999999999777654432 001111 2223457888886
Q ss_pred CCccccccCCcccCCCCcccCCCCCeee----eecccc-CCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCC--
Q psy4579 93 NEDAQFDASNYDTDKGGNVQLPNEDAQF----DASNYD-TDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKEN-- 165 (368)
Q Consensus 93 ~~~~~~~~~~~~~~~~g~i~i~~~~~~~----~~~~~~-h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~-- 165 (368)
+++..+... +.||.|++|+.+... ...+.. |...|++++|+|++ .+|++|+.||.|++||++......
T Consensus 110 ~~~~~l~~~----~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~ 184 (377)
T 3dwl_C 110 PNEDKFAVG----SGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNN-VLLAAGCADRKAYVLSAYVRDVDAKP 184 (377)
T ss_dssp TTSSCCEEE----ESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTS-SEEEEEESSSCEEEEEECCSSCC-CC
T ss_pred CCCCEEEEE----ecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCC-CEEEEEeCCCEEEEEEEEecccCCCc
Confidence 654444332 358999999987643 455556 99999999999998 999999999999999996432111
Q ss_pred ---------cccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeE
Q psy4579 166 ---------RVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVED 236 (368)
Q Consensus 166 ---------~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~ 236 (368)
....+...+ +|...|. +++|+|+ +.+|++++.||.|++||++++.... ..+..+.+|...|.+
T Consensus 185 ~~~~~~~~~~~~~~~~~~-~~~~~v~---~~~~sp~-~~~l~~~~~d~~i~iwd~~~~~~~~---~~~~~~~~~~~~v~~ 256 (377)
T 3dwl_C 185 EASVWGSRLPFNTVCAEY-PSGGWVH---AVGFSPS-GNALAYAGHDSSVTIAYPSAPEQPP---RALITVKLSQLPLRS 256 (377)
T ss_dssp CSCSSCSCCCEEEEEECC-CCSSSEE---EEEECTT-SSCEEEEETTTEEC-CEECSTTSCE---EECCCEECSSSCEEE
T ss_pred cccccccccchhhhhhcc-cCCceEE---EEEECCC-CCEEEEEeCCCcEEEEECCCCCCcc---eeeEeecCCCCceEE
Confidence 012234455 8999996 9999998 8999999999999999999874311 115677889999999
Q ss_pred EEEee--ecccccCCCCccceEEEEeecCCcccccccccccCCC---------------------------CCcccccCC
Q psy4579 237 YSIHR--LILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDK---------------------------GDFGGFGSV 287 (368)
Q Consensus 237 v~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~---------------------------~~~~~~~~~ 287 (368)
++|++ .++++++.++.. +|-... .. .......+... ..+...+..
T Consensus 257 ~~~s~~~~~l~~~~~~~~~-~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (377)
T 3dwl_C 257 LLWANESAIVAAGYNYSPI-LLQGNE----SG-WAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRSTFRNMDLK 330 (377)
T ss_dssp EEEEETTEEEEEESSSSEE-EECCCC--------CCSBCCCSCCCCCCBSSSSSBCCCCCC-------------------
T ss_pred EEEcCCCCEEEEEcCCcEE-EEEeCC----Cc-eEEEeeecccccccccccccccccccccccccccccccccccchhhc
Confidence 99986 345555443322 332110 00 00000000000 000000000
Q ss_pred C-CceeeeeecCcccceeEEEEeCCCCc---EEEEecCCCeEEEEEC
Q psy4579 288 S-GKIEIEIKINHEGEVNRARYMPQNPC---VIATKTPSSDVLVFDY 330 (368)
Q Consensus 288 ~-~~~~~~~~~~h~~~i~~~~~~p~~~~---~lasgs~Dg~i~iwd~ 330 (368)
. ..........|...|+++++.+.... .|+|||.||+|++||+
T Consensus 331 g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 331 GSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp ------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred cccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 0 00111222369999999998775534 6889999999999985
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... | Back alignment and structure |
|---|
Probab=99.95 E-value=1.1e-27 Score=210.32 Aligned_cols=258 Identities=13% Similarity=0.177 Sum_probs=184.8
Q ss_pred hhhhhhhhhcCcchheeecccccccCceeeEecCCcccccCCCCccccccCcceeeeccccCCC-CCcEEEEEEecCCCc
Q psy4579 17 NEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDE-QNHLLIASVQLPNED 95 (368)
Q Consensus 17 ~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~ 95 (368)
+...++|......+...+.. ..-++.+++|+|++++|++++.|+.+.+|+.+ .+...... .....+.++.+.+..
T Consensus 44 dg~i~iw~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~--~~~~~~~~~~~~~~v~~~~~~~~~ 119 (312)
T 4ery_A 44 DKLIKIWGAYDGKFEKTISG--HKLGISDVAWSSDSNLLVSASDDKTLKIWDVS--SGKCLKTLKGHSNYVFCCNFNPQS 119 (312)
T ss_dssp TSCEEEEETTTCCEEEEECC--CSSCEEEEEECTTSSEEEEEETTSEEEEEETT--TCCEEEEEECCSSCEEEEEECSSS
T ss_pred CCeEEEEeCCCcccchhhcc--CCCceEEEEEcCCCCEEEEECCCCEEEEEECC--CCcEEEEEcCCCCCEEEEEEcCCC
Confidence 45677888776655554443 35579999999999999999999999776543 33222221 112346667775544
Q ss_pred cccccCCcccCCCCcccCCCCCe-eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceee
Q psy4579 96 AQFDASNYDTDKGGNVQLPNEDA-QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIF 174 (368)
Q Consensus 96 ~~~~~~~~~~~~~g~i~i~~~~~-~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~ 174 (368)
..+... +.||.|++|+... +....+..|..+|.+++|+|++ .+|++|+.||.|++||++++. ....+
T Consensus 120 ~~l~s~----~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~~wd~~~~~-------~~~~~ 187 (312)
T 4ery_A 120 NLIVSG----SFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDG-SLIVSSSYDGLCRIWDTASGQ-------CLKTL 187 (312)
T ss_dssp SEEEEE----ETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCC-------EEEEE
T ss_pred CEEEEE----eCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCC-CEEEEEeCCCcEEEEECCCCc-------eeeEE
Confidence 433332 3589999999864 5566677899999999999998 899999999999999998764 23333
Q ss_pred -eccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEE--EEe---eecccccC
Q psy4579 175 -TGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDY--SIH---RLILGTHT 248 (368)
Q Consensus 175 -~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v--~~~---~~~~~~~~ 248 (368)
..+..++. .++|+|+ +.+|++++.||.|++||++++ .++..+.+|...+.++ .+. ...+.+++
T Consensus 188 ~~~~~~~~~---~~~~~~~-~~~l~~~~~d~~i~iwd~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~ 256 (312)
T 4ery_A 188 IDDDNPPVS---FVKFSPN-GKYILAATLDNTLKLWDYSKG-------KCLKTYTGHKNEKYCIFANFSVTGGKWIVSGS 256 (312)
T ss_dssp CCSSCCCEE---EEEECTT-SSEEEEEETTTEEEEEETTTT-------EEEEEECSSCCSSSCCCEEEECSSSCEEEECC
T ss_pred eccCCCceE---EEEECCC-CCEEEEEcCCCeEEEEECCCC-------cEEEEEEecCCceEEEEEEEEeCCCcEEEEEC
Confidence 34566675 8999999 899999999999999999886 4456677776543322 222 12233333
Q ss_pred CCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEec--CCCeEE
Q psy4579 249 SDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKT--PSSDVL 326 (368)
Q Consensus 249 ~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs--~Dg~i~ 326 (368)
.| +.+.+|+..+++....+. +|...|.+++|+|++ .+|++++ .|++|+
T Consensus 257 ~d----------------------------g~i~vwd~~~~~~~~~~~-~h~~~v~~~~~~p~~-~~l~s~~~~~d~~i~ 306 (312)
T 4ery_A 257 ED----------------------------NLVYIWNLQTKEIVQKLQ-GHTDVVISTACHPTE-NIIASAALENDKTIK 306 (312)
T ss_dssp TT----------------------------SCEEEEETTTCCEEEEEC-CCSSCEEEEEECSSS-SEEEEEECTTTCCEE
T ss_pred CC----------------------------CEEEEEECCCchhhhhhh-ccCCcEEEEeecCcC-CceEEEEccCCccEE
Confidence 33 334555555666666665 899999999999999 5777876 699999
Q ss_pred EEECC
Q psy4579 327 VFDYT 331 (368)
Q Consensus 327 iwd~~ 331 (368)
+|+..
T Consensus 307 ~W~~d 311 (312)
T 4ery_A 307 LWKSD 311 (312)
T ss_dssp EEECC
T ss_pred EecCC
Confidence 99974
|
| >3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.4e-27 Score=219.53 Aligned_cols=261 Identities=12% Similarity=0.128 Sum_probs=177.0
Q ss_pred cccCceeeEecC-CcccccCCCCccccccCcceeee-ccccC-C--CCCcEEEEEEecCCCccccccCCcccCCCCcccC
Q psy4579 39 LEWPSLTAQWLP-DVTSVQLPNEDAQFDASNYDTDK-GTHTS-D--EQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQL 113 (368)
Q Consensus 39 ~~~~~~~~~~~p-~~~~l~~~~~~~~~~~~~~~~~~-~~~~~-~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i 113 (368)
+.-+|.+++|+| ++++|++|+.||.+++|+..... +.... . ......|.++.+.+....+..+ +.||.|++
T Consensus 62 h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~----s~dg~i~v 137 (437)
T 3gre_A 62 EPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVS----SKDGQIIV 137 (437)
T ss_dssp TTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEE----ETTSEEEE
T ss_pred CCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEE----eCCCEEEE
Confidence 456899999999 99999999999999777654311 21111 1 1123347788886544433332 35899999
Q ss_pred CCCC----eeeeec----------ccc--CCCCceeeE--ecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeee
Q psy4579 114 PNED----AQFDAS----------NYD--TDKGGYGLS--WNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFT 175 (368)
Q Consensus 114 ~~~~----~~~~~~----------~~~--h~~~v~~l~--~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~ 175 (368)
|+.+ ++.... +.. +...+.++. ++|++ .+|++|+.||.|++||++++. +...+.
T Consensus 138 wd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~-------~~~~~~ 209 (437)
T 3gre_A 138 LKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEK-SLLVALTNLSRVIIFDIRTLE-------RLQIIE 209 (437)
T ss_dssp EEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSC-EEEEEEETTSEEEEEETTTCC-------EEEEEE
T ss_pred EEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCC-CEEEEEeCCCeEEEEeCCCCe-------eeEEEc
Confidence 9984 111111 112 666777777 55777 899999999999999998864 567777
Q ss_pred c--cccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeee-cccccEeEEEEee------ecccc
Q psy4579 176 G--HTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFT-GHTAVVEDYSIHR------LILGT 246 (368)
Q Consensus 176 ~--h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~v~~v~~~~------~~~~~ 246 (368)
+ |.+.|. +++|+|+ +.+|++|+.||.|++||++++ .++..+. .|...|.+++|++ ..+++
T Consensus 210 ~~~h~~~v~---~~~~s~~-~~~l~s~~~dg~i~iwd~~~~-------~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s 278 (437)
T 3gre_A 210 NSPRHGAVS---SICIDEE-CCVLILGTTRGIIDIWDIRFN-------VLIRSWSFGDHAPITHVEVCQFYGKNSVIVVG 278 (437)
T ss_dssp CCGGGCCEE---EEEECTT-SCEEEEEETTSCEEEEETTTT-------EEEEEEBCTTCEEEEEEEECTTTCTTEEEEEE
T ss_pred cCCCCCceE---EEEECCC-CCEEEEEcCCCeEEEEEcCCc-------cEEEEEecCCCCceEEEEeccccCCCccEEEE
Confidence 7 888996 9999999 999999999999999999986 4456654 6778999998875 26777
Q ss_pred cCCCCccceEEEEee-----cCCcccccccccccCCCCCcccccCCCCceeeeee-cCcccceeEEEEeCCCCcEEEEec
Q psy4579 247 HTSDEQNHLLIASVQ-----LPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIK-INHEGEVNRARYMPQNPCVIATKT 320 (368)
Q Consensus 247 ~~~d~~~~~~~~~~~-----~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~-~~h~~~i~~~~~~p~~~~~lasgs 320 (368)
++.|+.+++|..... +...........+......+ ....+. ..|...|++++|+ ++ .+|++|+
T Consensus 279 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---------~~~~~~~~~~~~~v~~l~~~-~~-~~l~s~~ 347 (437)
T 3gre_A 279 GSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGL---------EELNFCGIRSLNALSTISVS-ND-KILLTDE 347 (437)
T ss_dssp ESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSG---------GGCCCCCCCSGGGGCCEEEE-TT-EEEEEEG
T ss_pred EcCCCcEEEEEcCCCcEEEEEEcCCCCCccceeccccccc---------ccceecccccCCceEEEEEC-Cc-eEEEecC
Confidence 777777777643200 00000000001111100000 000111 1388999999999 66 6888999
Q ss_pred CCCeEEEEECCCC
Q psy4579 321 PSSDVLVFDYTKH 333 (368)
Q Consensus 321 ~Dg~i~iwd~~~~ 333 (368)
.||.|++||++..
T Consensus 348 ~d~~i~~wd~~~~ 360 (437)
T 3gre_A 348 ATSSIVMFSLNEL 360 (437)
T ss_dssp GGTEEEEEETTCG
T ss_pred CCCeEEEEECCCc
Confidence 9999999999763
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.8e-27 Score=245.78 Aligned_cols=314 Identities=13% Similarity=0.154 Sum_probs=229.2
Q ss_pred hhhhhhhhhcCcchheeecccccccCceeeEecCCcccccCCCCccccccCcceeeeccccCC-CCCcEEEEEEecCCC-
Q psy4579 17 NEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSD-EQNHLLIASVQLPNE- 94 (368)
Q Consensus 17 ~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~- 94 (368)
+...++|+..+......+.. +.-++.+++|+|++++|++++.|+.+.+|+.. .+..... ......+.++.+.+.
T Consensus 636 d~~i~vw~~~~~~~~~~~~~--h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~--~~~~~~~~~~~~~~v~~~~~~~~~ 711 (1249)
T 3sfz_A 636 DKTLQVFKAETGEKLLDIKA--HEDEVLCCAFSSDDSYIATCSADKKVKIWDSA--TGKLVHTYDEHSEQVNCCHFTNKS 711 (1249)
T ss_dssp TSCEEEEETTTCCEEEEECC--CSSCEEEEEECTTSSEEEEEETTSEEEEEETT--TCCEEEEEECCSSCEEEEEECSSS
T ss_pred CCeEEEEECCCCCEEEEecc--CCCCEEEEEEecCCCEEEEEeCCCeEEEEECC--CCceEEEEcCCCCcEEEEEEecCC
Confidence 45678898888766655543 45689999999999999999999999766543 3333222 112234667777443
Q ss_pred ccccccCCcccCCCCcccCCCCCe-eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcc------
Q psy4579 95 DAQFDASNYDTDKGGNVQLPNEDA-QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRV------ 167 (368)
Q Consensus 95 ~~~~~~~~~~~~~~g~i~i~~~~~-~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~------ 167 (368)
+..+.+++ +.||.|++|+... .....+.+|.+.|++++|+|++ ..|++|+.||+|++||+.++......
T Consensus 712 ~~~~l~sg---~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~-~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~ 787 (1249)
T 3sfz_A 712 NHLLLATG---SNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDD-ELLASCSADGTLRLWDVRSANERKSINVKRFF 787 (1249)
T ss_dssp SCCEEEEE---ETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSST-TEEEEEESSSEEEEEEGGGTEEEEEEECCCCC
T ss_pred CceEEEEE---eCCCeEEEEECCCcchhheecCCCCCEEEEEEecCC-CEEEEEECCCeEEEEeCCCCcccceecccccc
Confidence 33333333 4689999999865 5566778899999999999998 89999999999999998765211000
Q ss_pred -----------------------------------------cccce-eeeccccceecceeeEEeCCCCCeEEEeeCCCc
Q psy4579 168 -----------------------------------------IDAKT-IFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHT 205 (368)
Q Consensus 168 -----------------------------------------~~~~~-~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~ 205 (368)
..... ...+|...+. +++|+|+ +.++++++.||.
T Consensus 788 ~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~---~~~~sp~-~~~l~~~~~dg~ 863 (1249)
T 3sfz_A 788 LSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQ---YCDFSPY-DHLAVIALSQYC 863 (1249)
T ss_dssp --------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCC---EEEECSS-TTEEEEECSSSC
T ss_pred cccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceE---EEEEcCC-CCEEEEEeCCCe
Confidence 00011 1226777885 9999998 999999999999
Q ss_pred EEEEECCCCCCCCccccceeeeecccccEeEEEEee--ecccccCCCCccceEEEE------------------------
Q psy4579 206 ICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LILGTHTSDEQNHLLIAS------------------------ 259 (368)
Q Consensus 206 i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~d~~~~~~~~~------------------------ 259 (368)
|++||+.++ .....+.+|...|.+++|++ ..+.+++.|+.+++|...
T Consensus 864 v~vwd~~~~-------~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~ 936 (1249)
T 3sfz_A 864 VELWNIDSR-------LKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETM 936 (1249)
T ss_dssp EEEEETTTT-------EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEE
T ss_pred EEEEEcCCC-------ceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcE
Confidence 999999886 45677889999999999986 467777888888887421
Q ss_pred ------------------------------eecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEe
Q psy4579 260 ------------------------------VQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYM 309 (368)
Q Consensus 260 ------------------------------~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~ 309 (368)
+.+.+....+.+ ....|.+.+|+..+++...... +|...|.+++|+
T Consensus 937 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~---g~~~g~i~i~d~~~~~~~~~~~-~h~~~v~~l~~s 1012 (1249)
T 3sfz_A 937 VLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAF---GDEDGAIKIIELPNNRVFSSGV-GHKKAVRHIQFT 1012 (1249)
T ss_dssp EEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEE---EETTSCCEEEETTTTSCEEECC-CCSSCCCCEEEC
T ss_pred EEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEE---EcCCCCEEEEEcCCCceeeecc-cCCCceEEEEEC
Confidence 111121111111 1234667888888887766665 899999999999
Q ss_pred CCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeecccCceeeecceeee
Q psy4579 310 PQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 310 p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p~~ 365 (368)
|++ .+|++++.||.|++||+... ....+.+|...|.+++|+|..
T Consensus 1013 ~dg-~~l~s~~~dg~i~vwd~~~~-----------~~~~~~~~~~~v~~~~~~~~~ 1056 (1249)
T 3sfz_A 1013 ADG-KTLISSSEDSVIQVWNWQTG-----------DYVFLQAHQETVKDFRLLQDS 1056 (1249)
T ss_dssp SSS-SCEEEECSSSBEEEEETTTT-----------EEECCBCCSSCEEEEEECSSS
T ss_pred CCC-CEEEEEcCCCEEEEEECCCC-----------ceEEEecCCCcEEEEEEcCCC
Confidence 999 57779999999999999751 122456899999999999853
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.1e-27 Score=216.13 Aligned_cols=263 Identities=17% Similarity=0.219 Sum_probs=192.3
Q ss_pred ccCceeeEecCCcccccCCCCccccccCcceeeeccccCCCCCcEEEEEEecCCCccccccCCcccCCCCcccCCCCCe-
Q psy4579 40 EWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDA- 118 (368)
Q Consensus 40 ~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~- 118 (368)
+..+.+++|++ ..+++++.|+.+.+|+.....-...........|.++.|.+.+..+.++ +.||.|++|+...
T Consensus 93 ~~~~~~~~~s~--~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~----~~dg~i~iwd~~~~ 166 (401)
T 4aez_A 93 DYYLNLLDWSN--LNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVG----LGNGLVDIYDVESQ 166 (401)
T ss_dssp CTTCBCEEECT--TSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEE----ETTSCEEEEETTTC
T ss_pred CceEEEEeecC--CCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEE----CCCCeEEEEECcCC
Confidence 34466688876 4577788999986665543222222222234558888886654443332 3589999999764
Q ss_pred eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEE
Q psy4579 119 QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLL 198 (368)
Q Consensus 119 ~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~ 198 (368)
+....+.+|...|.+++|+ + ..|++|+.||.|++||++.... ....+.+|.+.|. +++|+|+ +.+|+
T Consensus 167 ~~~~~~~~~~~~v~~~~~~--~-~~l~~~~~dg~i~i~d~~~~~~------~~~~~~~~~~~v~---~~~~~~~-~~~l~ 233 (401)
T 4aez_A 167 TKLRTMAGHQARVGCLSWN--R-HVLSSGSRSGAIHHHDVRIANH------QIGTLQGHSSEVC---GLAWRSD-GLQLA 233 (401)
T ss_dssp CEEEEECCCSSCEEEEEEE--T-TEEEEEETTSEEEEEETTSSSC------EEEEEECCSSCEE---EEEECTT-SSEEE
T ss_pred eEEEEecCCCCceEEEEEC--C-CEEEEEcCCCCEEEEecccCcc------eeeEEcCCCCCee---EEEEcCC-CCEEE
Confidence 5566677899999999995 3 7999999999999999985432 4678889999996 9999998 99999
Q ss_pred EeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee---ecccccCCCCccceEEEEeecCCccccccccccc
Q psy4579 199 SASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR---LILGTHTSDEQNHLLIASVQLPNEDAQFDASNYD 275 (368)
Q Consensus 199 s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~---~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d 275 (368)
+|+.||.|++||++++ .+...+.+|...|.+++|+| .++.++++
T Consensus 234 s~~~d~~v~iwd~~~~-------~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~g-------------------------- 280 (401)
T 4aez_A 234 SGGNDNVVQIWDARSS-------IPKFTKTNHNAAVKAVAWCPWQSNLLATGGG-------------------------- 280 (401)
T ss_dssp EEETTSCEEEEETTCS-------SEEEEECCCSSCCCEEEECTTSTTEEEEECC--------------------------
T ss_pred EEeCCCeEEEccCCCC-------CccEEecCCcceEEEEEECCCCCCEEEEecC--------------------------
Confidence 9999999999999886 45677888999999999986 23333221
Q ss_pred CCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEE--ecCCCeEEEEECCCCCCCCCCCCCCCCceeeeccc
Q psy4579 276 TDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIAT--KTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQ 353 (368)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~las--gs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~ 353 (368)
...+.+.+|+..+++....+ .|...|.+++|+|++. +|++ |+.||.|++||++. +.......+.+|.
T Consensus 281 s~d~~i~i~d~~~~~~~~~~--~~~~~v~~~~~s~~~~-~l~~~~g~~dg~i~v~~~~~--------~~~~~~~~~~~h~ 349 (401)
T 4aez_A 281 TMDKQIHFWNAATGARVNTV--DAGSQVTSLIWSPHSK-EIMSTHGFPDNNLSIWSYSS--------SGLTKQVDIPAHD 349 (401)
T ss_dssp TTTCEEEEEETTTCCEEEEE--ECSSCEEEEEECSSSS-EEEEEECTTTCEEEEEEEET--------TEEEEEEEEECCS
T ss_pred CCCCEEEEEECCCCCEEEEE--eCCCcEEEEEECCCCC-eEEEEeecCCCcEEEEecCC--------ccceeEEEecCCC
Confidence 11233444455556555554 3678899999999995 5556 56899999999975 2233444577999
Q ss_pred Cceeeecceeee
Q psy4579 354 KEGLIEGTYNCY 365 (368)
Q Consensus 354 ~~V~~l~w~p~~ 365 (368)
..|.+++|+|+.
T Consensus 350 ~~v~~~~~s~dg 361 (401)
T 4aez_A 350 TRVLYSALSPDG 361 (401)
T ss_dssp SCCCEEEECTTS
T ss_pred CCEEEEEECCCC
Confidence 999999999875
|
| >3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.8e-27 Score=211.01 Aligned_cols=280 Identities=15% Similarity=0.115 Sum_probs=190.0
Q ss_pred cccCceeeEecCCcccccCCCCccccccCcceeeecc--ccCC-CCCcEEEEEEecCCC-ccccccCCcccCCCCcccCC
Q psy4579 39 LEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGT--HTSD-EQNHLLIASVQLPNE-DAQFDASNYDTDKGGNVQLP 114 (368)
Q Consensus 39 ~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~g~i~i~ 114 (368)
+.-+|.+++|+|++++|++++.||.+++|+....... .... ......|.++.|.+. +....+++ +.||.|++|
T Consensus 10 H~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~---~~dg~v~vw 86 (351)
T 3f3f_A 10 HDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASA---SYDKTVKLW 86 (351)
T ss_dssp CSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEE---ETTSCEEEE
T ss_pred cccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEE---cCCCeEEEE
Confidence 4568999999999999999999999977765432211 1111 112335777888553 23333333 358999999
Q ss_pred CCCe----------eeeeccccCCCCceeeEecCC--CCCeeEEEeCCCcEEEEeCCCCCCCCcccc------cceeeec
Q psy4579 115 NEDA----------QFDASNYDTDKGGYGLSWNPS--LNGYLLSASDDHTICLWDINATPKENRVID------AKTIFTG 176 (368)
Q Consensus 115 ~~~~----------~~~~~~~~h~~~v~~l~~sp~--~~~~lasg~~dg~v~iwd~~~~~~~~~~~~------~~~~~~~ 176 (368)
+... +....+..|...|.+++|+|+ + .+|++++.||.|++||+++......... ......+
T Consensus 87 d~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (351)
T 3f3f_A 87 EEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLG-LKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPAN 165 (351)
T ss_dssp EECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGC-SEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSS
T ss_pred ecCCCcccccccCcceeeeecccCCceeEEEEcCCCCC-cEEEEecCCCcEEEecCCChHHhccccccccccccccccCC
Confidence 9865 445667789999999999999 8 8999999999999999987653211000 0011125
Q ss_pred cccceecceeeEEeCC--CCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeee------cccccC
Q psy4579 177 HTAVVEVRYGLSWNPS--LNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRL------ILGTHT 248 (368)
Q Consensus 177 h~~~v~~~~~i~~~p~--~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~------~~~~~~ 248 (368)
|...+. +++|+|+ .+.++++++.|+.+.+|+...+.. .....+.+|...|.+++|+|. ++++++
T Consensus 166 ~~~~~~---~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~-----~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~ 237 (351)
T 3f3f_A 166 HLQSDF---CLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKL-----HVAAKLPGHKSLIRSISWAPSIGRWYQLIATGC 237 (351)
T ss_dssp CSCCCE---EEEECCCSSSCCEEEEEETTEEEEEEECTTSCE-----EEEEECCCCCSCEEEEEECCCSSCSSEEEEEEE
T ss_pred ccccee---EEEeccCCCCCcEEEEecCCCcEEEEccCCCce-----eeeeecCCCCcceeEEEECCCCCCcceEEEEEc
Confidence 677774 9999996 478999999999998888766531 335677889999999999864 688899
Q ss_pred CCCccceEEEEeecCCccccc----------------cccc-cc-CCCCCcccccCCCCceeeeeecCcccceeEEEEeC
Q psy4579 249 SDEQNHLLIASVQLPNEDAQF----------------DASN-YD-TDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMP 310 (368)
Q Consensus 249 ~d~~~~~~~~~~~~~~~~~~~----------------~~~~-~d-~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p 310 (368)
.|+.+++|............- .... .+ ........++....+....+. +|...|++++|+|
T Consensus 238 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~s~ 316 (351)
T 3f3f_A 238 KDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHD-DHNGEVWSVSWNL 316 (351)
T ss_dssp TTSCEEEEEEEECC---------------------------------------CCSEEEEEEEEEC-TTSSCEEEEEECS
T ss_pred CCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEe-cccccEEEEEEcC
Confidence 999999987664211100000 0000 00 000111222222334444444 8999999999999
Q ss_pred CCCcEEEEecCCCeEEEEECCC
Q psy4579 311 QNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 311 ~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
++ .+|++|+.||.|++||+..
T Consensus 317 ~~-~~l~s~~~dg~v~iw~~~~ 337 (351)
T 3f3f_A 317 TG-TILSSAGDDGKVRLWKATY 337 (351)
T ss_dssp SS-CCEEEEETTSCEEEEEECT
T ss_pred CC-CEEEEecCCCcEEEEecCc
Confidence 99 6888999999999999975
|
| >4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.4e-27 Score=208.21 Aligned_cols=264 Identities=14% Similarity=0.213 Sum_probs=189.9
Q ss_pred hhhhhhhhhhcCcchheeecccccccCceeeEecCCcccccCCCCccccccCcceeeeccccCCCCC-cEEEEEEecCCC
Q psy4579 16 INEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQN-HLLIASVQLPNE 94 (368)
Q Consensus 16 ~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~ 94 (368)
.+...++|+..+..+...+..+....+|.+++|+|++++|++|+.|+.+++|+.. .+........ ...+..+...
T Consensus 43 ~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~--~~~~~~~~~~h~~~~~~~~~~-- 118 (318)
T 4ggc_A 43 LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQ--QQKRLRNMTSHSARVGSLSWN-- 118 (318)
T ss_dssp ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETT--TTEEEEEEECCSSCEEEEEEE--
T ss_pred eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecC--CceeEEEecCccceEEEeecC--
Confidence 3667899999998877777777777789999999999999999999999776544 3332222111 1112222221
Q ss_pred ccccccCCcccCCCCcccCCCCCe--eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccce
Q psy4579 95 DAQFDASNYDTDKGGNVQLPNEDA--QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKT 172 (368)
Q Consensus 95 ~~~~~~~~~~~~~~g~i~i~~~~~--~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~ 172 (368)
+ ...+++ +.++.+.+|+... .....+.+|...+.++.+++++ .+|++++.||+|++||+++++... ....
T Consensus 119 ~-~~l~s~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~s~~~d~~i~iwd~~~~~~~~---~~~~ 190 (318)
T 4ggc_A 119 S-YILSSG---SRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDG-RHLASGGNDNLVNVWPSAPGEGGW---VPLQ 190 (318)
T ss_dssp T-TEEEEE---ETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTS-SEEEEEETTSCEEEEESSCBTTBS---CCSE
T ss_pred C-CEEEEE---ecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCC-CEEEEEecCcceeEEECCCCcccc---ccee
Confidence 1 122222 3578888877653 4456678899999999999998 999999999999999998765322 1345
Q ss_pred eeeccccceecceeeEEeCCCCCeE--EEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee----ecccc
Q psy4579 173 IFTGHTAVVEVRYGLSWNPSLNGYL--LSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR----LILGT 246 (368)
Q Consensus 173 ~~~~h~~~v~~~~~i~~~p~~~~~l--~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~----~~~~~ 246 (368)
....|.+.+. ++.++|.....+ ++++.+++|++||.+... ......+...+..+.|.+ .++++
T Consensus 191 ~~~~~~~~v~---~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~--------~~~~~~~~~~v~~~~~~~~~~~~~~~s 259 (318)
T 4ggc_A 191 TFTQHQGAVK---AVAWCPWQSNVLATGGGTSDRHIRIWNVCSGA--------CLSAVDAHSQVCSILWSPHYKELISGH 259 (318)
T ss_dssp EECCCCSCEE---EEEECTTSTTEEEEEECTTTCEEEEEETTTCC--------EEEEEECSSCEEEEEEETTTTEEEEEE
T ss_pred eecccCCceE---EEEecCCCCcEEEEEecCCCCEEEEEeccccc--------ccccccceeeeeeeeecccccceEEEE
Confidence 5667788885 999999855554 467889999999998763 223344667788888875 12222
Q ss_pred cCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEE
Q psy4579 247 HTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVL 326 (368)
Q Consensus 247 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~ 326 (368)
+..| +.+.+|+..+++....+. +|.+.|++++|+|++ .+|||||.||+|+
T Consensus 260 g~~d----------------------------~~i~iwd~~~~~~~~~l~-gH~~~V~~l~~spdg-~~l~S~s~D~~v~ 309 (318)
T 4ggc_A 260 GFAQ----------------------------NQLVIWKYPTMAKVAELK-GHTSRVLSLTMSPDG-ATVASAAADETLR 309 (318)
T ss_dssp CTTT----------------------------CCEEEEETTTCCEEEEEC-CCSSCEEEEEECTTS-SCEEEEETTTEEE
T ss_pred EcCC----------------------------CEEEEEECCCCcEEEEEc-CCCCCEEEEEEcCCC-CEEEEEecCCeEE
Confidence 2222 335555666677777776 899999999999999 6788999999999
Q ss_pred EEECCC
Q psy4579 327 VFDYTK 332 (368)
Q Consensus 327 iwd~~~ 332 (368)
|||+..
T Consensus 310 iWd~~~ 315 (318)
T 4ggc_A 310 LWRCFE 315 (318)
T ss_dssp EECCSC
T ss_pred EEECCC
Confidence 999964
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.1e-27 Score=236.91 Aligned_cols=264 Identities=14% Similarity=0.129 Sum_probs=201.2
Q ss_pred cccCceeeEecCCcccccCCCCccccccCcceeeeccccCC-CCCcEEEEEEecCCCccccccCCcccCCCCcccCCCCC
Q psy4579 39 LEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSD-EQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNED 117 (368)
Q Consensus 39 ~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~ 117 (368)
+.-++.+++|+|+++.|++++.+|.+.+|++.. +..... ......|.++.|.+.+..+..+ +.||.|++|+..
T Consensus 12 h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~--~~~~~~~~~~~~~v~~~~~s~~~~~l~~~----~~dg~i~vw~~~ 85 (814)
T 3mkq_A 12 RSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYET--QVEVRSIQVTETPVRAGKFIARKNWIIVG----SDDFRIRVFNYN 85 (814)
T ss_dssp ECSCEEEEEECSSSSEEEEEETTSEEEEEETTT--TEEEEEEECCSSCEEEEEEEGGGTEEEEE----ETTSEEEEEETT
T ss_pred CCCceEEEEECCCCCEEEEEeCCCEEEEEECCC--CceEEEEecCCCcEEEEEEeCCCCEEEEE----eCCCeEEEEECC
Confidence 456799999999999999999999997776543 322222 1122347778886655444433 258999999976
Q ss_pred e-eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCe
Q psy4579 118 A-QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGY 196 (368)
Q Consensus 118 ~-~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~ 196 (368)
. +....+..|.+.|++++|+|++ .+|++|+.||.|++||+.++.. ....+.+|...+. +++|+|.++..
T Consensus 86 ~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~vw~~~~~~~------~~~~~~~~~~~v~---~~~~~p~~~~~ 155 (814)
T 3mkq_A 86 TGEKVVDFEAHPDYIRSIAVHPTK-PYVLSGSDDLTVKLWNWENNWA------LEQTFEGHEHFVM---CVAFNPKDPST 155 (814)
T ss_dssp TCCEEEEEECCSSCEEEEEECSSS-SEEEEEETTSEEEEEEGGGTSE------EEEEEECCSSCEE---EEEEETTEEEE
T ss_pred CCcEEEEEecCCCCEEEEEEeCCC-CEEEEEcCCCEEEEEECCCCce------EEEEEcCCCCcEE---EEEEEcCCCCE
Confidence 4 5556677899999999999999 8999999999999999987532 4577889999996 99999943889
Q ss_pred EEEeeCCCcEEEEECCCCCCCCccccceeeeec-ccccEeEEEEee----ecccccCCCCccceEEEEeecCCccccccc
Q psy4579 197 LLSASDDHTICLWDINATPKENRVIDAKTIFTG-HTAVVEDYSIHR----LILGTHTSDEQNHLLIASVQLPNEDAQFDA 271 (368)
Q Consensus 197 l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~v~~v~~~~----~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 271 (368)
|++++.||.|++||++++. +...+.. +...+.+++|++ ..+.+++.+
T Consensus 156 l~~~~~dg~v~vwd~~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d--------------------- 207 (814)
T 3mkq_A 156 FASGCLDRTVKVWSLGQST-------PNFTLTTGQERGVNYVDYYPLPDKPYMITASDD--------------------- 207 (814)
T ss_dssp EEEEETTSEEEEEETTCSS-------CSEEEECCCTTCCCEEEECCSTTCCEEEEECTT---------------------
T ss_pred EEEEeCCCeEEEEECCCCc-------ceeEEecCCCCCEEEEEEEECCCCCEEEEEeCC---------------------
Confidence 9999999999999998763 2344444 448899999975 123333322
Q ss_pred ccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeec
Q psy4579 272 SNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRG 351 (368)
Q Consensus 272 ~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~g 351 (368)
+.+.+|+..+++....+. +|...|.+++|+|++ .+|++|+.||.|++||+.. ......+..
T Consensus 208 -------g~i~~~d~~~~~~~~~~~-~~~~~v~~~~~~~~~-~~l~~~~~dg~v~vwd~~~----------~~~~~~~~~ 268 (814)
T 3mkq_A 208 -------LTIKIWDYQTKSCVATLE-GHMSNVSFAVFHPTL-PIIISGSEDGTLKIWNSST----------YKVEKTLNV 268 (814)
T ss_dssp -------SEEEEEETTTTEEEEEEE-CCSSCEEEEEECSSS-SEEEEEETTSCEEEEETTT----------CSEEEEECC
T ss_pred -------CEEEEEECCCCcEEEEEc-CCCCCEEEEEEcCCC-CEEEEEeCCCeEEEEECCC----------CcEEEEeec
Confidence 334445555566666665 799999999999999 5888999999999999975 445567788
Q ss_pred ccCceeeecceeee
Q psy4579 352 HQKEGLIEGTYNCY 365 (368)
Q Consensus 352 h~~~V~~l~w~p~~ 365 (368)
|...|.+++|+|..
T Consensus 269 ~~~~v~~~~~~~~~ 282 (814)
T 3mkq_A 269 GLERSWCIATHPTG 282 (814)
T ss_dssp SSSSEEEEEECTTC
T ss_pred CCCcEEEEEEccCC
Confidence 99999999999975
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.1e-26 Score=207.98 Aligned_cols=278 Identities=11% Similarity=0.072 Sum_probs=205.0
Q ss_pred hheeecccccccCceeeEecCCcccccCCCCccccccCcceeeeccccCCC-CCcEEEEEEecCCCccccccCCcccCCC
Q psy4579 30 LYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDE-QNHLLIASVQLPNEDAQFDASNYDTDKG 108 (368)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 108 (368)
....+....+.-++.+++|+|++++|++++.|+.+.+|+. ..+...... .....|.++.+.+.+..+... +.|
T Consensus 22 ~~~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~--~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~----~~d 95 (369)
T 3zwl_B 22 HMKAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYS--LNGERLGTLDGHTGTIWSIDVDCFTKYCVTG----SAD 95 (369)
T ss_dssp SEEEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEET--TTCCEEEEECCCSSCEEEEEECTTSSEEEEE----ETT
T ss_pred ccccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeC--CCchhhhhhhhcCCcEEEEEEcCCCCEEEEE----eCC
Confidence 3444444556789999999999999999999999966654 333332221 122347778886554444332 358
Q ss_pred CcccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCC-----CcEEEEeCCCCCCCCcc----cccceeeecccc
Q psy4579 109 GNVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDD-----HTICLWDINATPKENRV----IDAKTIFTGHTA 179 (368)
Q Consensus 109 g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~d-----g~v~iwd~~~~~~~~~~----~~~~~~~~~h~~ 179 (368)
|.|++|+...........|...|.+++|+|++ .+|++++.+ |.|++||+......... ......+..|..
T Consensus 96 g~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (369)
T 3zwl_B 96 YSIKLWDVSNGQCVATWKSPVPVKRVEFSPCG-NYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEG 174 (369)
T ss_dssp TEEEEEETTTCCEEEEEECSSCEEEEEECTTS-SEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTT
T ss_pred CeEEEEECCCCcEEEEeecCCCeEEEEEccCC-CEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcC
Confidence 99999998765555555599999999999999 899999998 99999999876432111 113455666666
Q ss_pred --ceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee--ecccccCCCCccce
Q psy4579 180 --VVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LILGTHTSDEQNHL 255 (368)
Q Consensus 180 --~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~d~~~~~ 255 (368)
.+. +++|+|+ +.+|++++.||.|++||+++.. .+...+..|...|.+++|++ ..+.+++.+
T Consensus 175 ~~~~~---~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----- 239 (369)
T 3zwl_B 175 LDAAT---VAGWSTK-GKYIIAGHKDGKISKYDVSNNY------EYVDSIDLHEKSISDMQFSPDLTYFITSSRD----- 239 (369)
T ss_dssp CCCEE---EEEECGG-GCEEEEEETTSEEEEEETTTTT------EEEEEEECCSSCEEEEEECTTSSEEEEEETT-----
T ss_pred cccee---EEEEcCC-CCEEEEEcCCCEEEEEECCCCc------EeEEEEecCCCceeEEEECCCCCEEEEecCC-----
Confidence 775 9999998 8999999999999999998742 45677888999999999986 222222222
Q ss_pred EEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCC------------
Q psy4579 256 LIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSS------------ 323 (368)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg------------ 323 (368)
+.+.+|+..+++....+. +...+.+++|+|++ .++++++.++
T Consensus 240 -----------------------~~i~v~d~~~~~~~~~~~--~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~ 293 (369)
T 3zwl_B 240 -----------------------TNSFLVDVSTLQVLKKYE--TDCPLNTAVITPLK-EFIILGGGQEAKDVTTTSANEG 293 (369)
T ss_dssp -----------------------SEEEEEETTTCCEEEEEE--CSSCEEEEEECSSS-SEEEEEECCC------------
T ss_pred -----------------------ceEEEEECCCCceeeeec--CCCCceeEEecCCC-ceEEEeecCCCceEEEEecCCC
Confidence 234445555566555554 78899999999999 5666878887
Q ss_pred --eEEEEECCCCCCCCCCCCCCCCceeeecccCceeeecceeee
Q psy4579 324 --DVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 324 --~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p~~ 365 (368)
.+++||+.. ..++..+.+|...|.+++|+|+.
T Consensus 294 ~~~i~~~d~~~----------~~~~~~~~~~~~~v~~~~~s~~~ 327 (369)
T 3zwl_B 294 KFEARFYHKIF----------EEEIGRVQGHFGPLNTVAISPQG 327 (369)
T ss_dssp -CEEEEEETTT----------CCEEEEEECCSSCEEEEEECTTS
T ss_pred cceeEEEecCC----------CcchhheecccCcEEEEEECCCC
Confidence 899999975 45566788999999999999874
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C | Back alignment and structure |
|---|
Probab=99.95 E-value=3e-27 Score=212.18 Aligned_cols=293 Identities=13% Similarity=0.105 Sum_probs=195.7
Q ss_pred hhhhhhhhhcCcc--hheeecccccccCceeeEecCCcccccCCCCccccccCcceeeeccccCC-CCCcEEEEEEecCC
Q psy4579 17 NEEYKIWKKNTPF--LYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSD-EQNHLLIASVQLPN 93 (368)
Q Consensus 17 ~~~~~~w~~~~~~--~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~ 93 (368)
+...++|+..... ....+. .+.-++.+++|+|++++|++++.|+.+.+|+........... ......+.++.+.+
T Consensus 29 d~~v~i~~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~ 106 (372)
T 1k8k_C 29 NHEVHIYEKSGNKWVQVHELK--EHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAP 106 (372)
T ss_dssp SSEEEEEEEETTEEEEEEEEE--CCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECT
T ss_pred CCEEEEEeCCCCcEEeeeeec--CCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECC
Confidence 4567788877764 333333 345689999999999999999999999666543221111111 22223477777765
Q ss_pred CccccccCCcccCCCCcccCCCCCeee-----eeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCC----
Q psy4579 94 EDAQFDASNYDTDKGGNVQLPNEDAQF-----DASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKE---- 164 (368)
Q Consensus 94 ~~~~~~~~~~~~~~~g~i~i~~~~~~~-----~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~---- 164 (368)
.+..+... +.+|.|++|+.+... ......|...|.+++|+|++ .+|++|+.||.|++||++.....
T Consensus 107 ~~~~l~~~----~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~i~~~d~~~~~~~~~~~ 181 (372)
T 1k8k_C 107 NEKKFAVG----SGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNS-VLLAAGSCDFKCRIFSAYIKEVEERPA 181 (372)
T ss_dssp TSSEEEEE----ETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTS-SEEEEEETTSCEEEEECCCTTTSCCCC
T ss_pred CCCEEEEE----eCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCC-CEEEEEcCCCCEEEEEccccccccccc
Confidence 54443333 358999999976432 23336789999999999998 89999999999999997532110
Q ss_pred -------CcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEE
Q psy4579 165 -------NRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDY 237 (368)
Q Consensus 165 -------~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v 237 (368)
.....+...+.+|...+. +++|+|+ +.+|++++.||.|++||++++ .++..+..|...|.++
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~v~---~~~~~~~-~~~l~~~~~d~~i~i~d~~~~-------~~~~~~~~~~~~v~~~ 250 (372)
T 1k8k_C 182 PTPWGSKMPFGELMFESSSSCGWVH---GVCFSAN-GSRVAWVSHDSTVCLADADKK-------MAVATLASETLPLLAV 250 (372)
T ss_dssp CBTTBSCCCTTCEEEECCCCSSCEE---EEEECSS-SSEEEEEETTTEEEEEEGGGT-------TEEEEEECSSCCEEEE
T ss_pred ccccccccchhhheEecCCCCCeEE---EEEECCC-CCEEEEEeCCCEEEEEECCCC-------ceeEEEccCCCCeEEE
Confidence 001235667778999996 9999998 899999999999999999887 4577888899999999
Q ss_pred EEee--ecccccCCCCccceEEEEeecCCcccccccccccCCC-------CCcccc---cCCCCcee------eeeecCc
Q psy4579 238 SIHR--LILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDK-------GDFGGF---GSVSGKIE------IEIKINH 299 (368)
Q Consensus 238 ~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~-------~~~~~~---~~~~~~~~------~~~~~~h 299 (368)
+|++ .++.++ .++.+++|.... +. .........+... ..+..| + ..+... ..+..+|
T Consensus 251 ~~~~~~~~l~~~-~d~~i~i~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~h 325 (372)
T 1k8k_C 251 TFITESSLVAAG-HDCFPVLFTYDS--AA-GKLSFGGRLDVPKQSSQRGLTARERFQNLD-KKASSEGSAAAGAGLDSLH 325 (372)
T ss_dssp EEEETTEEEEEE-TTSSCEEEEEET--TT-TEEEECCCCCCC--------CHHHHHHHCC-CCC---------CCCSSSS
T ss_pred EEecCCCEEEEE-eCCeEEEEEccC--cC-ceEEEeeccCccccchhhhcchhhhhhhcc-cccccccCccccccccccc
Confidence 9986 344444 677777776542 00 0000000000000 001111 1 111221 2333489
Q ss_pred ccceeEEEEeCCCC---cEEEEecCCCeEEEEECCC
Q psy4579 300 EGEVNRARYMPQNP---CVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 300 ~~~i~~~~~~p~~~---~~lasgs~Dg~i~iwd~~~ 332 (368)
...|++++|+|... .+|+||+.||+|++||++.
T Consensus 326 ~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~ 361 (372)
T 1k8k_C 326 KNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRS 361 (372)
T ss_dssp SSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHH
T ss_pred cCCcceeEEecCCCcceeeEEEecCCCceEEEEecC
Confidence 99999999886543 5888999999999999864
|
| >1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.6e-27 Score=211.70 Aligned_cols=265 Identities=9% Similarity=0.029 Sum_probs=188.3
Q ss_pred ccccCceeeEecCCcccccCCCCccccccCcceeeecc--ccCCCCCcEEEEEEecCCCcc-ccccCCcccCCCCcccCC
Q psy4579 38 ALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGT--HTSDEQNHLLIASVQLPNEDA-QFDASNYDTDKGGNVQLP 114 (368)
Q Consensus 38 ~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~g~i~i~ 114 (368)
.+.-++.+++|+|++++|++++.|+.+.+|+....... ..........|.++.+.+.+. .+.++ +.||.|++|
T Consensus 9 ~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~----~~dg~i~~w 84 (342)
T 1yfq_A 9 APKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVG----TVQGEILKV 84 (342)
T ss_dssp CCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEE----ETTSCEEEE
T ss_pred CCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEE----cCCCeEEEE
Confidence 45668999999999999999999999966654432200 111111223466777755444 33332 358999999
Q ss_pred CC-Ceeeeecccc--CCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCC---------CCCCCcccccceeeecccccee
Q psy4579 115 NE-DAQFDASNYD--TDKGGYGLSWNPSLNGYLLSASDDHTICLWDINA---------TPKENRVIDAKTIFTGHTAVVE 182 (368)
Q Consensus 115 ~~-~~~~~~~~~~--h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~---------~~~~~~~~~~~~~~~~h~~~v~ 182 (368)
+. +......+.. |...|.+++|+| + ..|++++.||.|++||+++ .. +...+. |...+.
T Consensus 85 d~~~~~~~~~~~~~~~~~~v~~l~~~~-~-~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-------~~~~~~-~~~~v~ 154 (342)
T 1yfq_A 85 DLIGSPSFQALTNNEANLGICRICKYG-D-DKLIAASWDGLIEVIDPRNYGDGVIAVKNL-------NSNNTK-VKNKIF 154 (342)
T ss_dssp CSSSSSSEEECBSCCCCSCEEEEEEET-T-TEEEEEETTSEEEEECHHHHTTBCEEEEES-------CSSSSS-SCCCEE
T ss_pred EeccCCceEeccccCCCCceEEEEeCC-C-CEEEEEcCCCeEEEEcccccccccccccCC-------eeeEEe-eCCceE
Confidence 99 8766677778 999999999999 7 8999999999999999986 32 334444 778885
Q ss_pred cceeeEEeCCCCCeEEEeeCCCcEEEEECCC-CCCCCccccceeeeecccccEeEEEEee---ecccccCCCCccceEEE
Q psy4579 183 VRYGLSWNPSLNGYLLSASDDHTICLWDINA-TPKENRVIDAKTIFTGHTAVVEDYSIHR---LILGTHTSDEQNHLLIA 258 (368)
Q Consensus 183 ~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~v~~v~~~~---~~~~~~~~d~~~~~~~~ 258 (368)
+++|+|+ . +++++.|+.|++||+++ ... ........|...+.+++|++ ..+.+++.++.+++|..
T Consensus 155 ---~~~~~~~-~--l~~~~~d~~i~i~d~~~~~~~-----~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~ 223 (342)
T 1yfq_A 155 ---TMDTNSS-R--LIVGMNNSQVQWFRLPLCEDD-----NGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFF 223 (342)
T ss_dssp ---EEEECSS-E--EEEEESTTEEEEEESSCCTTC-----CCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEEC
T ss_pred ---EEEecCC-c--EEEEeCCCeEEEEECCccccc-----cceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEE
Confidence 9999987 4 99999999999999987 432 11234456788899999986 45566666666555543
Q ss_pred EeecCCcccccccccccCCCCCcccccCCCCceeeeee--------cCcccceeEEEEeCCCCcEEEEecCCCeEEEEEC
Q psy4579 259 SVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIK--------INHEGEVNRARYMPQNPCVIATKTPSSDVLVFDY 330 (368)
Q Consensus 259 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~--------~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~ 330 (368)
...-... ..+....+. .+|...|.+++|+|++ .+|++|+.||.|++||+
T Consensus 224 ~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~-~~l~~~~~dg~i~vwd~ 280 (342)
T 1yfq_A 224 DDQGDDY----------------------NSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRH-KFLYTAGSDGIISCWNL 280 (342)
T ss_dssp CTTCCST----------------------TCTTCEEEECCCCCTTCCSSCCCEEEEEECTTT-CCEEEEETTSCEEEEET
T ss_pred cCCCccc----------------------ccccceeeecccccccccccceeEEEEEEcCCC-CEEEEecCCceEEEEcC
Confidence 2100000 001122222 1345599999999999 57789999999999999
Q ss_pred CCCCCCCCCCCCCCCceeeecc-cCceeeec
Q psy4579 331 TKHPSKPDPNGECHPDLRLRGH-QKEGLIEG 360 (368)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~gh-~~~V~~l~ 360 (368)
+. ...+..+.+| .+.|.+++
T Consensus 281 ~~----------~~~~~~~~~~h~~~v~~~~ 301 (342)
T 1yfq_A 281 QT----------RKKIKNFAKFNEDSVVKIA 301 (342)
T ss_dssp TT----------TEEEEECCCCSSSEEEEEE
T ss_pred cc----------HhHhhhhhcccCCCceEec
Confidence 75 3445677888 99999998
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A | Back alignment and structure |
|---|
Probab=99.95 E-value=3.2e-27 Score=226.14 Aligned_cols=312 Identities=12% Similarity=0.141 Sum_probs=207.5
Q ss_pred hhhhhhhhhcCc--------chheeecccccccCceeeEecCCcccccCCCCc----cccccCcceeeeccccCCCCCcE
Q psy4579 17 NEEYKIWKKNTP--------FLYDLVMTHALEWPSLTAQWLPDVTSVQLPNED----AQFDASNYDTDKGTHTSDEQNHL 84 (368)
Q Consensus 17 ~~~~~~w~~~~~--------~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 84 (368)
+...++|+.... .+...+. ....++.+++|+|++++|++++.+ +.+.+|+ ......... ....
T Consensus 87 dg~v~vw~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~-~~~~ 161 (615)
T 1pgu_A 87 SGKVIVWGWTFDKESNSVEVNVKSEFQ--VLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLGEVS-GHSQ 161 (615)
T ss_dssp TSEEEEEEEEEEGGGTEEEEEEEEEEE--CCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEEECC-SCSS
T ss_pred CCEEEEEeCCCCcccccccccccchhh--cccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcceeee-cCCc
Confidence 456778888533 2332222 246689999999999999998877 5664444 222111111 2223
Q ss_pred EEEEEecCCCccccccCCcccCCCCcccCCCCCe-eeeeccccCCC---CceeeEecCC-CCCeeEEEeCCCcEEEEeCC
Q psy4579 85 LIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDA-QFDASNYDTDK---GGYGLSWNPS-LNGYLLSASDDHTICLWDIN 159 (368)
Q Consensus 85 ~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~-~~~~~~~~h~~---~v~~l~~sp~-~~~~lasg~~dg~v~iwd~~ 159 (368)
.|.++.+.+......+.+ +.||.|++|+... +....+..|.. .|++++|+|+ + ++|++++.||.|++||+.
T Consensus 162 ~v~~~~~~~~~~~~l~~~---~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~l~~~~~dg~i~vwd~~ 237 (615)
T 1pgu_A 162 RINACHLKQSRPMRSMTV---GDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSG-EFVITVGSDRKISCFDGK 237 (615)
T ss_dssp CEEEEEECSSSSCEEEEE---ETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTC-CEEEEEETTCCEEEEETT
T ss_pred cEEEEEECCCCCcEEEEE---eCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCC-CEEEEEeCCCeEEEEECC
Confidence 477788866554223222 3589999999764 55566777998 9999999999 8 899999999999999998
Q ss_pred CCCCCCcccccceee-e---ccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCcc---------------
Q psy4579 160 ATPKENRVIDAKTIF-T---GHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRV--------------- 220 (368)
Q Consensus 160 ~~~~~~~~~~~~~~~-~---~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~--------------- 220 (368)
+++ ....+ . +|...|. +++|+ + +.+|++++.||.|++||++++......
T Consensus 238 ~~~-------~~~~~~~~~~~~~~~v~---~~~~~-~-~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (615)
T 1pgu_A 238 SGE-------FLKYIEDDQEPVQGGIF---ALSWL-D-SQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVV 305 (615)
T ss_dssp TCC-------EEEECCBTTBCCCSCEE---EEEES-S-SSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEE
T ss_pred CCC-------EeEEecccccccCCceE---EEEEc-C-CCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEE
Confidence 764 45566 5 8999996 99999 6 999999999999999999875321100
Q ss_pred -----------------------ccceeeeecccccEeEEEEeeecccccCCCCccceEE------------EEeecCCc
Q psy4579 221 -----------------------IDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLI------------ASVQLPNE 265 (368)
Q Consensus 221 -----------------------~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~------------~~~~~~~~ 265 (368)
..++..+.+|...|.+++| +. +.+++.|+.+++|. ..+.+++
T Consensus 306 ~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~-~~-l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~~- 382 (615)
T 1pgu_A 306 ATGNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTV-NP-LISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSK- 382 (615)
T ss_dssp EEETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEET-TT-TEEEETTSCEEETTTTEEECCCCSCEEEEECCS-
T ss_pred eCCCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEe-cC-cEEECCCCeEEEEEchhhcCcccCceEEEEECC-
Confidence 0122344556666666666 44 44444443333321 1111100
Q ss_pred cccccc-------cccc---------------------------------------------------------------
Q psy4579 266 DAQFDA-------SNYD--------------------------------------------------------------- 275 (368)
Q Consensus 266 ~~~~~~-------~~~d--------------------------------------------------------------- 275 (368)
...+.. ..|+
T Consensus 383 ~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 462 (615)
T 1pgu_A 383 AQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVG 462 (615)
T ss_dssp TTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEE
T ss_pred CcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEcCCEEEEe
Confidence 000000 0000
Q ss_pred CC-CCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeec-cc
Q psy4579 276 TD-KGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRG-HQ 353 (368)
Q Consensus 276 ~~-~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~g-h~ 353 (368)
.. .+.+.+|+..+++.......+|...|.+++|+|++ .+|++|+.||.|++||+.. ..++..+.+ |.
T Consensus 463 ~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g-~~l~~~~~dg~i~iw~~~~----------~~~~~~~~~~h~ 531 (615)
T 1pgu_A 463 LEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSE-TYIAAGDVMGKILLYDLQS----------REVKTSRWAFRT 531 (615)
T ss_dssp ETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTT----------TEEEECCSCCCS
T ss_pred ecCCCeEEEEECCCccccccccCCccCceEEEEECCCC-CEEEEcCCCCeEEEeeCCC----------CcceeEeecCCC
Confidence 01 45566666666554422333799999999999999 6888999999999999975 344455667 99
Q ss_pred Cceeeeccee
Q psy4579 354 KEGLIEGTYN 363 (368)
Q Consensus 354 ~~V~~l~w~p 363 (368)
..|++++|+|
T Consensus 532 ~~v~~~~~sp 541 (615)
T 1pgu_A 532 SKINAISWKP 541 (615)
T ss_dssp SCEEEEEECC
T ss_pred CceeEEEEcC
Confidence 9999999999
|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 | Back alignment and structure |
|---|
Probab=99.95 E-value=6.5e-27 Score=215.13 Aligned_cols=282 Identities=16% Similarity=0.207 Sum_probs=200.8
Q ss_pred hhhhhcCcchheeecccccccCceeeEecCCcccccCCCCccccccCcceeeeccccCC-CCCcEEEEEEecCCCccccc
Q psy4579 21 KIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSD-EQNHLLIASVQLPNEDAQFD 99 (368)
Q Consensus 21 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~ 99 (368)
++|+.....+..........-++.+++| +++++++|+.||.+.+|+. ..+..... ......|.++.+ .+ ...
T Consensus 114 ~~W~~~~~~~~~~~~~~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~--~~~~~~~~~~~h~~~v~~l~~--~~-~~l 186 (435)
T 1p22_A 114 SNWRCGRHSLQRIHCRSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDK--NTLECKRILTGHTGSVLCLQY--DE-RVI 186 (435)
T ss_dssp HHTTTCCCCCCCEECCCSSCCCEEEEEC--CSSEEEEEESSSCEEEEES--SSCCEEEEECCCSSCEEEEEC--CS-SEE
T ss_pred hhhccCCccceEEecccCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeC--CCCeEEEEEcCCCCcEEEEEE--CC-CEE
Confidence 4576654433322222233446777777 8999999999999976654 33333222 112234666666 22 233
Q ss_pred cCCcccCCCCcccCCCCCe-eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccc
Q psy4579 100 ASNYDTDKGGNVQLPNEDA-QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHT 178 (368)
Q Consensus 100 ~~~~~~~~~g~i~i~~~~~-~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~ 178 (368)
+++ +.||.|++|+... +....+.+|...|.+++|++ ..+++|+.||.|++||+.++... .....+.+|.
T Consensus 187 ~sg---~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~---~~l~s~s~dg~i~vwd~~~~~~~----~~~~~~~~~~ 256 (435)
T 1p22_A 187 ITG---SSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNN---GMMVTCSKDRSIAVWDMASPTDI----TLRRVLVGHR 256 (435)
T ss_dssp EEE---ETTSCEEEEESSSCCEEEEECCCCSCEEEEECCT---TEEEEEETTSCEEEEECSSSSCC----EEEEEECCCS
T ss_pred EEE---cCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEcC---CEEEEeeCCCcEEEEeCCCCCCc----eeeeEecCCC
Confidence 332 4599999999864 55667788999999999974 68999999999999999876421 1236778899
Q ss_pred cceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeeecccccCCCCccceEEE
Q psy4579 179 AVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIA 258 (368)
Q Consensus 179 ~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~ 258 (368)
..|. +++| + ++++++|+.||.|++||++++ .++..+.+|...|.++++++..+.+++.|+.+++
T Consensus 257 ~~v~---~~~~--~-~~~l~s~~~dg~i~vwd~~~~-------~~~~~~~~~~~~v~~~~~~~~~l~~g~~dg~i~i--- 320 (435)
T 1p22_A 257 AAVN---VVDF--D-DKYIVSASGDRTIKVWNTSTC-------EFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRL--- 320 (435)
T ss_dssp SCEE---EEEE--E-TTEEEEEETTSEEEEEETTTC-------CEEEEEECCSSCEEEEEEETTEEEEEETTSCEEE---
T ss_pred CcEE---EEEe--C-CCEEEEEeCCCeEEEEECCcC-------cEEEEEcCCCCcEEEEEeCCCEEEEEeCCCeEEE---
Confidence 9996 8998 3 789999999999999999987 4577888999999999998766666655554444
Q ss_pred EeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCC
Q psy4579 259 SVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPD 338 (368)
Q Consensus 259 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~ 338 (368)
|+..+++....+. +|...|.+++| ++ .+|++|+.||.|++||++.......
T Consensus 321 -------------------------wd~~~~~~~~~~~-~h~~~v~~~~~--~~-~~l~sg~~dg~i~vwd~~~~~~~~~ 371 (435)
T 1p22_A 321 -------------------------WDIECGACLRVLE-GHEELVRCIRF--DN-KRIVSGAYDGKIKVWDLVAALDPRA 371 (435)
T ss_dssp -------------------------EETTTCCEEEEEC-CCSSCEEEEEC--CS-SEEEEEETTSCEEEEEHHHHTSTTS
T ss_pred -------------------------EECCCCCEEEEEe-CCcCcEEEEEe--cC-CEEEEEeCCCcEEEEECCCCCCccc
Confidence 3444555555555 89999999999 55 6788999999999999975321111
Q ss_pred CCCCCCCceeeecccCceeeecceeee
Q psy4579 339 PNGECHPDLRLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 339 ~~~~~~~~~~~~gh~~~V~~l~w~p~~ 365 (368)
. .....+..+.+|.+.|++++|++.+
T Consensus 372 ~-~~~~~~~~~~~h~~~v~~l~~~~~~ 397 (435)
T 1p22_A 372 P-AGTLCLRTLVEHSGRVFRLQFDEFQ 397 (435)
T ss_dssp C-TTTTEEEEECCCSSCCCCEEECSSC
T ss_pred c-ccchheeeccCCCCCeEEEEeCCCE
Confidence 1 1112455678999999999997655
|
| >2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B | Back alignment and structure |
|---|
Probab=99.95 E-value=8e-27 Score=214.20 Aligned_cols=266 Identities=16% Similarity=0.205 Sum_probs=186.9
Q ss_pred ccccccCceeeEecCC-cccccCCCCccccccCcceeee--------ccccCC-CCCcEEEEEEecCCCccccccCCccc
Q psy4579 36 THALEWPSLTAQWLPD-VTSVQLPNEDAQFDASNYDTDK--------GTHTSD-EQNHLLIASVQLPNEDAQFDASNYDT 105 (368)
Q Consensus 36 ~~~~~~~~~~~~~~p~-~~~l~~~~~~~~~~~~~~~~~~--------~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~ 105 (368)
...+..++.+++|+|+ +..+++++.+|.|.+|+..... ...... ......+.++.|.+......+++
T Consensus 124 ~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~--- 200 (430)
T 2xyi_A 124 KINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSA--- 200 (430)
T ss_dssp EEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEE---
T ss_pred EEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEE---
Confidence 3445678999999998 7899999999999777654310 111111 01112355666655444233333
Q ss_pred CCCCcccCCCCCee-----e---eeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeecc
Q psy4579 106 DKGGNVQLPNEDAQ-----F---DASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGH 177 (368)
Q Consensus 106 ~~~g~i~i~~~~~~-----~---~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h 177 (368)
+.||.|++|+.... . ...+..|...|.+++|+|++..+|++++.||.|++||+++.... .+...+..|
T Consensus 201 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~----~~~~~~~~~ 276 (430)
T 2xyi_A 201 SDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTS----KPSHTVDAH 276 (430)
T ss_dssp CTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSS----SCSEEEECC
T ss_pred eCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCC----cceeEeecC
Confidence 35899999998651 1 23456799999999999955589999999999999999876321 245677899
Q ss_pred ccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee---ecccccCCCCccc
Q psy4579 178 TAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR---LILGTHTSDEQNH 254 (368)
Q Consensus 178 ~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~---~~~~~~~~d~~~~ 254 (368)
...|+ +++|+|++..++++|+.||.|++||++... .++..+.+|...|.+++|+| .++++++.++.++
T Consensus 277 ~~~v~---~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~------~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~ 347 (430)
T 2xyi_A 277 TAEVN---CLSFNPYSEFILATGSADKTVALWDLRNLK------LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLH 347 (430)
T ss_dssp SSCEE---EEEECSSCTTEEEEEETTSEEEEEETTCTT------SCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCE
T ss_pred CCCeE---EEEeCCCCCCEEEEEeCCCeEEEEeCCCCC------CCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEE
Confidence 99996 999999845589999999999999998753 34677888999999999986 3577777777776
Q ss_pred eEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCC
Q psy4579 255 LLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
+|..... ...... -+...+ ........ .+|...|.+++|+|+++.+|++++.||.|++|++..
T Consensus 348 iwd~~~~--~~~~~~----~~~~~~--------~~~~~~~~-~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 348 VWDLSKI--GEEQST----EDAEDG--------PPELLFIH-GGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAE 410 (430)
T ss_dssp EEEGGGT--TCCCCH----HHHHHC--------CTTEEEEC-CCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECH
T ss_pred EEeCCCC--ccccCc----cccccC--------CcceEEEc-CCCCCCceEEEECCCCCCEEEEEECCCCEEEeEccc
Confidence 6643210 000000 000000 01223333 379999999999999966999999999999999974
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.95 E-value=4.3e-27 Score=210.61 Aligned_cols=277 Identities=11% Similarity=0.110 Sum_probs=193.9
Q ss_pred hhhhhhhhhcCcchheeecccccccCceeeEecCCcccccCCCCccccccCcceeeeccccCCCCCcEEEEEEecCCCcc
Q psy4579 17 NEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNEDA 96 (368)
Q Consensus 17 ~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 96 (368)
+...++|+.........+.. ..-++.+++|+|++++|++++.|+.+.+|+.. .+...........+.++.+.+.+.
T Consensus 53 dg~i~vwd~~~~~~~~~~~~--h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~--~~~~~~~~~~~~~v~~~~~~~~~~ 128 (369)
T 3zwl_B 53 DSSASVWYSLNGERLGTLDG--HTGTIWSIDVDCFTKYCVTGSADYSIKLWDVS--NGQCVATWKSPVPVKRVEFSPCGN 128 (369)
T ss_dssp SSCEEEEETTTCCEEEEECC--CSSCEEEEEECTTSSEEEEEETTTEEEEEETT--TCCEEEEEECSSCEEEEEECTTSS
T ss_pred CCEEEEEeCCCchhhhhhhh--cCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC--CCcEEEEeecCCCeEEEEEccCCC
Confidence 44677888777665555543 35589999999999999999999999666543 332222211223466777766555
Q ss_pred ccccCCcc-cCCCCcccCCCCCee------------eeeccccCCC--CceeeEecCCCCCeeEEEeCCCcEEEEeCCCC
Q psy4579 97 QFDASNYD-TDKGGNVQLPNEDAQ------------FDASNYDTDK--GGYGLSWNPSLNGYLLSASDDHTICLWDINAT 161 (368)
Q Consensus 97 ~~~~~~~~-~~~~g~i~i~~~~~~------------~~~~~~~h~~--~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~ 161 (368)
.+.+...+ ...+|.|.+|+.... .......|.. .+.+++|+|++ +.|++++.||.|++||+.+.
T Consensus 129 ~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~ 207 (369)
T 3zwl_B 129 YFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKG-KYIIAGHKDGKISKYDVSNN 207 (369)
T ss_dssp EEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGG-CEEEEEETTSEEEEEETTTT
T ss_pred EEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCC-CEEEEEcCCCEEEEEECCCC
Confidence 44433211 123489999987542 2223445655 99999999998 89999999999999999874
Q ss_pred CCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee
Q psy4579 162 PKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR 241 (368)
Q Consensus 162 ~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~ 241 (368)
. .....+..|...+. +++|+|+ +.+|++++.||.|++||++++ .....+. +...+..++|++
T Consensus 208 ~------~~~~~~~~~~~~v~---~~~~~~~-~~~l~~~~~d~~i~v~d~~~~-------~~~~~~~-~~~~~~~~~~~~ 269 (369)
T 3zwl_B 208 Y------EYVDSIDLHEKSIS---DMQFSPD-LTYFITSSRDTNSFLVDVSTL-------QVLKKYE-TDCPLNTAVITP 269 (369)
T ss_dssp T------EEEEEEECCSSCEE---EEEECTT-SSEEEEEETTSEEEEEETTTC-------CEEEEEE-CSSCEEEEEECS
T ss_pred c------EeEEEEecCCCcee---EEEECCC-CCEEEEecCCceEEEEECCCC-------ceeeeec-CCCCceeEEecC
Confidence 2 25678888999996 9999998 999999999999999999886 3345555 777899999986
Q ss_pred --ecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEe
Q psy4579 242 --LILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATK 319 (368)
Q Consensus 242 --~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasg 319 (368)
..+.+++.++...++.... ......+.+|+..+++....+. +|...|.+++|+|++ .+|++|
T Consensus 270 ~~~~l~~~~~~~~~~~~~~~~--------------~~~~~~i~~~d~~~~~~~~~~~-~~~~~v~~~~~s~~~-~~l~s~ 333 (369)
T 3zwl_B 270 LKEFIILGGGQEAKDVTTTSA--------------NEGKFEARFYHKIFEEEIGRVQ-GHFGPLNTVAISPQG-TSYASG 333 (369)
T ss_dssp SSSEEEEEECCC---------------------------CEEEEEETTTCCEEEEEE-CCSSCEEEEEECTTS-SEEEEE
T ss_pred CCceEEEeecCCCceEEEEec--------------CCCcceeEEEecCCCcchhhee-cccCcEEEEEECCCC-CEEEEE
Confidence 2233333333222222110 0111235556666777776666 899999999999999 688899
Q ss_pred cCCCeEEEEECCC
Q psy4579 320 TPSSDVLVFDYTK 332 (368)
Q Consensus 320 s~Dg~i~iwd~~~ 332 (368)
+.||.|++|+++.
T Consensus 334 ~~dg~v~iw~~~~ 346 (369)
T 3zwl_B 334 GEDGFIRLHHFEK 346 (369)
T ss_dssp ETTSEEEEEEECH
T ss_pred cCCCeEEEEECcc
Confidence 9999999999975
|
| >2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.7e-27 Score=235.49 Aligned_cols=201 Identities=12% Similarity=0.097 Sum_probs=140.3
Q ss_pred cccccCceeeEecCCcccccCCCCccccccCcceeeeccccCCCCCcEEEEEEecCCCccccccCCcccCCCCcccCCCC
Q psy4579 37 HALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNE 116 (368)
Q Consensus 37 ~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~ 116 (368)
+-++-++.+++|+|++++||+|+.||.+++|+... +...........|..+.|.+ +. ..+++ +.|++|++|+.
T Consensus 14 ~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~--~~~~~~~~~~~~V~~l~fsp-g~-~L~S~---s~D~~v~lWd~ 86 (902)
T 2oaj_A 14 YGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQ--VEVVIKLEDRSAIKEMRFVK-GI-YLVVI---NAKDTVYVLSL 86 (902)
T ss_dssp EECSSCEEEEEEETTTTEEEEEETTSEEEEECSTT--CEEEEECSSCCCEEEEEEET-TT-EEEEE---ETTCEEEEEET
T ss_pred cCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCC--cEEEEEcCCCCCEEEEEEcC-CC-EEEEE---ECcCeEEEEEC
Confidence 34567899999999999999999999997775432 22211222234578888865 33 23332 35999999998
Q ss_pred CeeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCccccc---c-eeeeccccceecceeeEEeCC
Q psy4579 117 DAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDA---K-TIFTGHTAVVEVRYGLSWNPS 192 (368)
Q Consensus 117 ~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~---~-~~~~~h~~~v~~~~~i~~~p~ 192 (368)
..........|...|++++|+|++ ++|++|+.||+|++||++++......... . ..+.+|.++|. +++|+|+
T Consensus 87 ~~~~~~~~~~~~~~V~~v~~sp~g-~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~---sl~~sp~ 162 (902)
T 2oaj_A 87 YSQKVLTTVFVPGKITSIDTDASL-DWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIV---SIQWNPR 162 (902)
T ss_dssp TTCSEEEEEECSSCEEEEECCTTC-SEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCC---EEEEETT
T ss_pred CCCcEEEEEcCCCCEEEEEECCCC-CEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeE---EEEEccC
Confidence 754443334577899999999999 99999999999999999876321000000 0 23467999996 9999997
Q ss_pred CCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecc------------------cccEeEEEEee--ecccccCCCCc
Q psy4579 193 LNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGH------------------TAVVEDYSIHR--LILGTHTSDEQ 252 (368)
Q Consensus 193 ~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~------------------~~~v~~v~~~~--~~~~~~~~d~~ 252 (368)
+...+++|+.||.| +||++++. +...+..| ...|++++|+| ..+++++.|+.
T Consensus 163 ~~~~l~~g~~dg~v-lWd~~~~~-------~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~ 234 (902)
T 2oaj_A 163 DIGTVLISYEYVTL-TYSLVENE-------IKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNS 234 (902)
T ss_dssp EEEEEEEECSSCEE-EEETTTTE-------EEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCC
T ss_pred CCCEEEEEeCCCcE-EEECCCCc-------eEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCe
Confidence 56799999999999 99998762 23333322 45677777764 34555566655
Q ss_pred cceE
Q psy4579 253 NHLL 256 (368)
Q Consensus 253 ~~~~ 256 (368)
+++|
T Consensus 235 i~lW 238 (902)
T 2oaj_A 235 LVFW 238 (902)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5555
|
| >4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A | Back alignment and structure |
|---|
Probab=99.95 E-value=4.6e-26 Score=208.49 Aligned_cols=262 Identities=19% Similarity=0.203 Sum_probs=193.2
Q ss_pred CceeeEecCCcccccCCCCccccccCcceeeeccccCC-CCCcEEEEEEecCCCccccccCCcccCCCCcccCCCCCe-e
Q psy4579 42 PSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSD-EQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDA-Q 119 (368)
Q Consensus 42 ~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~-~ 119 (368)
....++|++++ .||+|. |++|++|+.....-.+... ......|.++.|.+++..+. .+ +.||.|++|+... +
T Consensus 107 y~~~l~wS~~n-~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~la-sg---s~Dg~v~iWd~~~~~ 180 (420)
T 4gga_A 107 YLNLVDWSSGN-VLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLA-VG---TSSAEVQLWDVQQQK 180 (420)
T ss_dssp TCBCEEECTTS-EEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEE-EE---ETTSCEEEEETTTTE
T ss_pred cceeEEECCCC-EEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEE-EE---ECCCeEEEEEcCCCc
Confidence 34568999864 677764 7888766544322222222 23345688999976554433 33 3699999999864 6
Q ss_pred eeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEE
Q psy4579 120 FDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLS 199 (368)
Q Consensus 120 ~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s 199 (368)
.+....+|...|.++++++ ..|++|+.|+.+++||...... ....+.+|...+. .+.|+|+ +.++++
T Consensus 181 ~~~~~~~h~~~v~~~s~~~---~~l~sgs~d~~i~~~d~~~~~~------~~~~~~~h~~~~~---~~~~~~~-g~~l~s 247 (420)
T 4gga_A 181 RLRNMTSHSARVGSLSWNS---YILSSGSRSGHIHHHDVRVAEH------HVATLSGHSQEVC---GLRWAPD-GRHLAS 247 (420)
T ss_dssp EEEEECCCSSCEEEEEEET---TEEEEEETTSEEEEEETTSSSC------EEEEEECCSSCEE---EEEECTT-SSEEEE
T ss_pred EEEEEeCCCCceEEEeeCC---CEEEEEeCCCceeEeeecccce------eeEEeccccccee---eeeecCC-CCeeee
Confidence 6677888999999998863 7899999999999999987542 4577889999996 9999998 999999
Q ss_pred eeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeee---cc--cccCCCCccceEEEEeecCCcccccccccc
Q psy4579 200 ASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRL---IL--GTHTSDEQNHLLIASVQLPNEDAQFDASNY 274 (368)
Q Consensus 200 ~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~---~~--~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 274 (368)
++.|+.+++||...+.... ..+.....|...|.+++|++. ++ ++++.|+.
T Consensus 248 ~~~D~~v~i~~~~~~~~~~---~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~---------------------- 302 (420)
T 4gga_A 248 GGNDNLVNVWPSAPGEGGW---VPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRH---------------------- 302 (420)
T ss_dssp EETTSCEEEEESSCCSSCS---CCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCE----------------------
T ss_pred eeccccceEEeeccccccc---eeeeeecccCCceeeeeeCCCcccEEEEEeecCCCE----------------------
Confidence 9999999999998764322 234567779999999999751 22 22233333
Q ss_pred cCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEE-ecCCCeEEEEECCCCCCCCCCCCCCCCceeeeccc
Q psy4579 275 DTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIAT-KTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQ 353 (368)
Q Consensus 275 d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~las-gs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~ 353 (368)
+.+|+..++.....+. +...+.++.|+|++..++++ |+.|+.|+|||++. ..++..+.||.
T Consensus 303 ------I~iwd~~t~~~~~~~~--~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~----------~~~v~~l~gH~ 364 (420)
T 4gga_A 303 ------IRIWNVCSGACLSAVD--AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPT----------MAKVAELKGHT 364 (420)
T ss_dssp ------EEEEETTTTEEEEEEE--CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTT----------CCEEEEECCCS
T ss_pred ------EEEEeCCccccceeec--cccceeeeeecCCCCeEEEEEecCCCEEEEEECCC----------CcEEEEEcCCC
Confidence 4445555666655554 55679999999999655543 45899999999975 56677899999
Q ss_pred Cceeeecceeee
Q psy4579 354 KEGLIEGTYNCY 365 (368)
Q Consensus 354 ~~V~~l~w~p~~ 365 (368)
+.|++|+|+|+.
T Consensus 365 ~~V~~l~~spdg 376 (420)
T 4gga_A 365 SRVLSLTMSPDG 376 (420)
T ss_dssp SCEEEEEECTTS
T ss_pred CCEEEEEEcCCC
Confidence 999999999975
|
| >4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* | Back alignment and structure |
|---|
Probab=99.94 E-value=2.7e-26 Score=210.97 Aligned_cols=196 Identities=16% Similarity=0.184 Sum_probs=147.9
Q ss_pred EEEEEecCCCccccccCCcccCCCCcccCCCCCee---eeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCC
Q psy4579 85 LIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQ---FDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINAT 161 (368)
Q Consensus 85 ~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~---~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~ 161 (368)
.|.++.|.+.+..+.+.+ +.||.|++||.... ......+|.+.|++|+|+|.+..+|++|+.||+|++||+++.
T Consensus 121 ~V~~l~~~P~~~~~lasG---s~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~ 197 (435)
T 4e54_B 121 RATSLAWHPTHPSTVAVG---SKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGN 197 (435)
T ss_dssp CEEEEEECSSCTTCEEEE---ETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSC
T ss_pred CEEEEEEeCCCCCEEEEE---eCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCC
Confidence 488899966555555554 46999999998642 345567899999999999954489999999999999999765
Q ss_pred CCCCcccccceeeecc---ccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEE
Q psy4579 162 PKENRVIDAKTIFTGH---TAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYS 238 (368)
Q Consensus 162 ~~~~~~~~~~~~~~~h---~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~ 238 (368)
. ...+..+ ...+ .+++|+|+ +.+|++|+.||.|++||++.. .+..+.+|...|++++
T Consensus 198 ~--------~~~~~~~~~~~~~~---~~~~~~~~-~~~l~~g~~dg~i~~wd~~~~--------~~~~~~~h~~~v~~v~ 257 (435)
T 4e54_B 198 I--------LRVFASSDTINIWF---CSLDVSAS-SRMVVTGDNVGNVILLNMDGK--------ELWNLRMHKKKVTHVA 257 (435)
T ss_dssp E--------EEEEECCSSCSCCC---CCEEEETT-TTEEEEECSSSBEEEEESSSC--------BCCCSBCCSSCEEEEE
T ss_pred c--------eeEEeccCCCCccE---EEEEECCC-CCEEEEEeCCCcEeeeccCcc--------eeEEEecccceEEeee
Confidence 2 2333322 2334 38999998 999999999999999999753 3456788999999999
Q ss_pred Eee---ecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCcee--eeeecCcccceeEEEEeCCCC
Q psy4579 239 IHR---LILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIE--IEIKINHEGEVNRARYMPQNP 313 (368)
Q Consensus 239 ~~~---~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~--~~~~~~h~~~i~~~~~~p~~~ 313 (368)
|+| .++++++.|+.+++|.. .+.+.. .....+|...|++++|+|++
T Consensus 258 ~~p~~~~~~~s~s~d~~v~iwd~----------------------------~~~~~~~~~~~~~~h~~~v~~~~~spdg- 308 (435)
T 4e54_B 258 LNPCCDWFLATASVDQTVKIWDL----------------------------RQVRGKASFLYSLPHRHPVNAACFSPDG- 308 (435)
T ss_dssp ECTTCSSEEEEEETTSBCCEEET----------------------------TTCCSSSCCSBCCBCSSCEEECCBCTTS-
T ss_pred ecCCCceEEEEecCcceeeEEec----------------------------ccccccceEEEeeeccccccceeECCCC-
Confidence 985 35666666666665532 111111 11223799999999999999
Q ss_pred cEEEEecCCCeEEEEECCC
Q psy4579 314 CVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 314 ~~lasgs~Dg~i~iwd~~~ 332 (368)
.+|++|+.||+|+|||++.
T Consensus 309 ~~l~s~~~D~~i~iwd~~~ 327 (435)
T 4e54_B 309 ARLLTTDQKSEIRVYSASQ 327 (435)
T ss_dssp SEEEEEESSSCEEEEESSS
T ss_pred CeeEEEcCCCEEEEEECCC
Confidence 6788999999999999976
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A | Back alignment and structure |
|---|
Probab=99.94 E-value=2e-26 Score=220.50 Aligned_cols=286 Identities=10% Similarity=0.005 Sum_probs=208.0
Q ss_pred hhhhhhhhcCc----chheeecccccccC-ceeeEecC--CcccccCCCCccccccCcceee------eccccCC-CCCc
Q psy4579 18 EEYKIWKKNTP----FLYDLVMTHALEWP-SLTAQWLP--DVTSVQLPNEDAQFDASNYDTD------KGTHTSD-EQNH 83 (368)
Q Consensus 18 ~~~~~w~~~~~----~~~~~~~~~~~~~~-~~~~~~~p--~~~~l~~~~~~~~~~~~~~~~~------~~~~~~~-~~~~ 83 (368)
....+|+..++ .....+.. +..+ +.+++|+| ++++|++++.||.+.+|+.... ....... ....
T Consensus 39 ~~v~v~~~~~~~~~~~~~~~~~~--h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~ 116 (615)
T 1pgu_A 39 KSAFVRCLDDGDSKVPPVVQFTG--HGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLA 116 (615)
T ss_dssp TEEEEEECCSSCCSSCSEEEECT--TTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCS
T ss_pred CeEEEEECCCCCCccccceEEec--CCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhccc
Confidence 45677887766 45444433 3557 99999999 9999999999999977765422 1122111 1122
Q ss_pred EEEEEEecCCCccccccCCcccCCCCcccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCC
Q psy4579 84 LLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPK 163 (368)
Q Consensus 84 ~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~ 163 (368)
..|..+.+.+.+..+.+...+....+.|.+|+ .++....+.+|...|++++|+|+++..+++++.||.|++||+.+..
T Consensus 117 ~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d-~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~- 194 (615)
T 1pgu_A 117 GPISDISWDFEGRRLCVVGEGRDNFGVFISWD-SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFK- 194 (615)
T ss_dssp SCEEEEEECTTSSEEEEEECCSSCSEEEEETT-TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBE-
T ss_pred ccEEEEEEeCCCCEEEEeccCCCCccEEEEEE-CCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcc-
Confidence 34778888766655555443333348999999 4456677788999999999999984489999999999999988763
Q ss_pred CCcccccceeeecccc---ceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeee-e---cccccEeE
Q psy4579 164 ENRVIDAKTIFTGHTA---VVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIF-T---GHTAVVED 236 (368)
Q Consensus 164 ~~~~~~~~~~~~~h~~---~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~-~---~~~~~v~~ 236 (368)
....+.+|.. .+. +++|+|+++.+|++++.||.|++||++++ ..+..+ . +|...|.+
T Consensus 195 ------~~~~~~~~~~~~~~v~---~~~~~~~~~~~l~~~~~dg~i~vwd~~~~-------~~~~~~~~~~~~~~~~v~~ 258 (615)
T 1pgu_A 195 ------FSASDRTHHKQGSFVR---DVEFSPDSGEFVITVGSDRKISCFDGKSG-------EFLKYIEDDQEPVQGGIFA 258 (615)
T ss_dssp ------EEEEECSSSCTTCCEE---EEEECSTTCCEEEEEETTCCEEEEETTTC-------CEEEECCBTTBCCCSCEEE
T ss_pred ------eeeeecccCCCCceEE---EEEECCCCCCEEEEEeCCCeEEEEECCCC-------CEeEEecccccccCCceEE
Confidence 5677888998 886 99999975789999999999999999887 345666 5 79999999
Q ss_pred EEEe-eecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeec---CcccceeEEEEeCCC
Q psy4579 237 YSIH-RLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKI---NHEGEVNRARYMPQN 312 (368)
Q Consensus 237 v~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~---~h~~~i~~~~~~p~~ 312 (368)
++|+ ...+.+++.++. +.+|+..+++....+.. .+...+.++.|. ++
T Consensus 259 ~~~~~~~~l~~~~~d~~----------------------------i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 309 (615)
T 1pgu_A 259 LSWLDSQKFATVGADAT----------------------------IRVWDVTTSKCVQKWTLDKQQLGNQQVGVVAT-GN 309 (615)
T ss_dssp EEESSSSEEEEEETTSE----------------------------EEEEETTTTEEEEEEECCTTCGGGCEEEEEEE-ET
T ss_pred EEEcCCCEEEEEcCCCc----------------------------EEEEECCCCcEEEEEcCCCCcccCceeEEEeC-CC
Confidence 9995 223333333333 33444445555555542 135678888886 66
Q ss_pred CcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeecccCceeeecceee
Q psy4579 313 PCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYNC 364 (368)
Q Consensus 313 ~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p~ 364 (368)
.++++|+.||.|++||++. ..++..+.+|.+.|.+++| |.
T Consensus 310 -~~l~~~~~~g~i~~~d~~~----------~~~~~~~~~~~~~v~~~~~-~~ 349 (615)
T 1pgu_A 310 -GRIISLSLDGTLNFYELGH----------DEVLKTISGHNKGITALTV-NP 349 (615)
T ss_dssp -TEEEEEETTSCEEEEETTE----------EEEEEEECCCSSCEEEEET-TT
T ss_pred -CeEEEEECCCCEEEEECCC----------CcEEEEEeCCCCCEEEEEe-cC
Confidence 5778999999999999975 3455677889999999988 75
|
| >3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.94 E-value=3.1e-26 Score=200.57 Aligned_cols=255 Identities=16% Similarity=0.075 Sum_probs=189.9
Q ss_pred cccCceeeEecCCcccccCCCCccccccCcceeeeccccCC-CCCcEEEEEEecCCCccccccCCcccCCCCcccCCCCC
Q psy4579 39 LEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSD-EQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNED 117 (368)
Q Consensus 39 ~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~ 117 (368)
+.-++.+++| |++++|++++.||.+++|+.. .+..... ......+.++.+.+....+... +.||.+++|+..
T Consensus 17 h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~----~~dg~i~~~~~~ 89 (313)
T 3odt_A 17 HDQDVRDVVA-VDDSKVASVSRDGTVRLWSKD--DQWLGTVVYTGQGFLNSVCYDSEKELLLFG----GKDTMINGVPLF 89 (313)
T ss_dssp CSSCEEEEEE-EETTEEEEEETTSEEEEEEES--SSEEEEEEEECSSCEEEEEEETTTTEEEEE----ETTSCEEEEETT
T ss_pred CCCCcEEEEe-cCCCEEEEEEcCCcEEEEECC--CCEEEEEeecCCccEEEEEECCCCCEEEEe----cCCCeEEEEEee
Confidence 4668999999 999999999999999777543 2222221 1112346677775554443333 358999988754
Q ss_pred e----eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCC
Q psy4579 118 A----QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSL 193 (368)
Q Consensus 118 ~----~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~ 193 (368)
. +....+..|...|.+++|+ + ++|++++.||.|++||. . .....+..|...+. +++|+|.+
T Consensus 90 ~~~~~~~~~~~~~~~~~i~~~~~~--~-~~l~~~~~d~~i~~~d~--~-------~~~~~~~~~~~~v~---~~~~~~~~ 154 (313)
T 3odt_A 90 ATSGEDPLYTLIGHQGNVCSLSFQ--D-GVVISGSWDKTAKVWKE--G-------SLVYNLQAHNASVW---DAKVVSFS 154 (313)
T ss_dssp CCTTSCC-CEECCCSSCEEEEEEE--T-TEEEEEETTSEEEEEET--T-------EEEEEEECCSSCEE---EEEEEETT
T ss_pred ecCCCCcccchhhcccCEEEEEec--C-CEEEEEeCCCCEEEEcC--C-------cEEEecccCCCcee---EEEEccCC
Confidence 3 3455677899999999993 4 79999999999999992 2 15677888999995 99999844
Q ss_pred CCeEEEeeCCCcEEEEECCCCCCCCccccceeeeec-ccccEeEEEEeee-cccccCCCCccceEEEEeecCCccccccc
Q psy4579 194 NGYLLSASDDHTICLWDINATPKENRVIDAKTIFTG-HTAVVEDYSIHRL-ILGTHTSDEQNHLLIASVQLPNEDAQFDA 271 (368)
Q Consensus 194 ~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~v~~v~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 271 (368)
++++++++.||.|++||... ....+.. |...+.+++|++. .+.+++.+
T Consensus 155 ~~~l~~~~~d~~i~i~d~~~---------~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d--------------------- 204 (313)
T 3odt_A 155 ENKFLTASADKTIKLWQNDK---------VIKTFSGIHNDVVRHLAVVDDGHFISCSND--------------------- 204 (313)
T ss_dssp TTEEEEEETTSCEEEEETTE---------EEEEECSSCSSCEEEEEEEETTEEEEEETT---------------------
T ss_pred CCEEEEEECCCCEEEEecCc---------eEEEEeccCcccEEEEEEcCCCeEEEccCC---------------------
Confidence 89999999999999999433 3456666 8899999999862 12222222
Q ss_pred ccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeec
Q psy4579 272 SNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRG 351 (368)
Q Consensus 272 ~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~g 351 (368)
+.+.+|+..+++....+. +|...|.+++|+|++ . |++++.||.|++||++. ..+...+.+
T Consensus 205 -------g~i~i~d~~~~~~~~~~~-~~~~~i~~~~~~~~~-~-l~~~~~dg~v~iwd~~~----------~~~~~~~~~ 264 (313)
T 3odt_A 205 -------GLIKLVDMHTGDVLRTYE-GHESFVYCIKLLPNG-D-IVSCGEDRTVRIWSKEN----------GSLKQVITL 264 (313)
T ss_dssp -------SEEEEEETTTCCEEEEEE-CCSSCEEEEEECTTS-C-EEEEETTSEEEEECTTT----------CCEEEEEEC
T ss_pred -------CeEEEEECCchhhhhhhh-cCCceEEEEEEecCC-C-EEEEecCCEEEEEECCC----------CceeEEEec
Confidence 334455555666666665 899999999999999 4 66899999999999975 455667889
Q ss_pred ccCceeeecceeee
Q psy4579 352 HQKEGLIEGTYNCY 365 (368)
Q Consensus 352 h~~~V~~l~w~p~~ 365 (368)
|...|.+++|+|+.
T Consensus 265 ~~~~i~~~~~~~~~ 278 (313)
T 3odt_A 265 PAISIWSVDCMSNG 278 (313)
T ss_dssp SSSCEEEEEECTTS
T ss_pred cCceEEEEEEccCC
Confidence 99999999999874
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.2e-26 Score=211.67 Aligned_cols=260 Identities=15% Similarity=0.164 Sum_probs=194.0
Q ss_pred ccCceeeEecCCcccccCCCCccccccCcceeeeccccCC-CCCcEEEEEEecCCCccccccCCcccCCCCcccCCCCCe
Q psy4579 40 EWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSD-EQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDA 118 (368)
Q Consensus 40 ~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~ 118 (368)
..++.+++|+|++++|++++.++.+.+|+ ..+..... ......|.++.+.+.+..+... +.||.|++|+...
T Consensus 108 ~~~v~~~~~s~~~~~l~~~~~dg~i~i~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~----~~d~~i~iwd~~~ 180 (425)
T 1r5m_A 108 TNQVTCLAWSHDGNSIVTGVENGELRLWN---KTGALLNVLNFHRAPIVSVKWNKDGTHIISM----DVENVTILWNVIS 180 (425)
T ss_dssp CBCEEEEEECTTSSEEEEEETTSCEEEEE---TTSCEEEEECCCCSCEEEEEECTTSSEEEEE----ETTCCEEEEETTT
T ss_pred CCceEEEEEcCCCCEEEEEeCCCeEEEEe---CCCCeeeeccCCCccEEEEEECCCCCEEEEE----ecCCeEEEEECCC
Confidence 45899999999999999999999997775 22222222 2223457778886555444333 3589999999864
Q ss_pred -eeeeccccCCCC---------------ceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeecccccee
Q psy4579 119 -QFDASNYDTDKG---------------GYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVE 182 (368)
Q Consensus 119 -~~~~~~~~h~~~---------------v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~ 182 (368)
+....+..|... +.+++|+|++ .+++++.||.|++||+.++. +...+.+|...+.
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~i~~~d~~~~~-------~~~~~~~~~~~i~ 251 (425)
T 1r5m_A 181 GTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDD--KFVIPGPKGAIFVYQITEKT-------PTGKLIGHHGPIS 251 (425)
T ss_dssp TEEEEEECCC---------------CCCBSCCEEEETT--EEEEECGGGCEEEEETTCSS-------CSEEECCCSSCEE
T ss_pred CcEEEEeeccccCccceeeccccCCcceeeEEEEcCCC--EEEEEcCCCeEEEEEcCCCc-------eeeeeccCCCceE
Confidence 444555556655 9999999974 68999999999999998764 5677889999996
Q ss_pred cceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeee-cccccCCCCccceEE----
Q psy4579 183 VRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRL-ILGTHTSDEQNHLLI---- 257 (368)
Q Consensus 183 ~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~-~~~~~~~d~~~~~~~---- 257 (368)
+++|+|+ +.+|++++.||.|++||++++ .+...+.+|...|.+++|++. .+.+++.++.+++|.
T Consensus 252 ---~~~~~~~-~~~l~~~~~d~~i~i~d~~~~-------~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~ 320 (425)
T 1r5m_A 252 ---VLEFNDT-NKLLLSASDDGTLRIWHGGNG-------NSQNCFYGHSQSIVSASWVGDDKVISCSMDGSVRLWSLKQN 320 (425)
T ss_dssp ---EEEEETT-TTEEEEEETTSCEEEECSSSB-------SCSEEECCCSSCEEEEEEETTTEEEEEETTSEEEEEETTTT
T ss_pred ---EEEECCC-CCEEEEEcCCCEEEEEECCCC-------ccceEecCCCccEEEEEECCCCEEEEEeCCCcEEEEECCCC
Confidence 9999998 889999999999999999886 346677889999999999864 667777777777773
Q ss_pred -------------EEeecCCcccccccccccCCCCCcccccCCCCc--------------------eeeeeecCccc--c
Q psy4579 258 -------------ASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGK--------------------IEIEIKINHEG--E 302 (368)
Q Consensus 258 -------------~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~--------------------~~~~~~~~h~~--~ 302 (368)
..+.+.++...+.+.. ..+.+.+|+..++. ....+. +|.. .
T Consensus 321 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~~---~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 396 (425)
T 1r5m_A 321 TLLALSIVDGVPIFAGRISQDGQKYAVAF---MDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQ-SSQDNDY 396 (425)
T ss_dssp EEEEEEECTTCCEEEEEECTTSSEEEEEE---TTSCEEEEECHHHHC--------------CEECCEEEEEC-CTTCCCC
T ss_pred cEeEecccCCccEEEEEEcCCCCEEEEEE---CCCeEEEEECCCCccceeeeecccccccCcccchhhhhhc-CcccCCc
Confidence 2223333333333222 34568888887776 555555 7766 9
Q ss_pred eeEEEEeCCCCcEEEEecCCCeEEEEECC
Q psy4579 303 VNRARYMPQNPCVIATKTPSSDVLVFDYT 331 (368)
Q Consensus 303 i~~~~~~p~~~~~lasgs~Dg~i~iwd~~ 331 (368)
|++++|+|++ .+|++|+.||.|++||++
T Consensus 397 v~~~~~s~~~-~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 397 IFDLSWNCAG-NKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp EEEEEECTTS-SEEEEEESSSCCEEEECC
T ss_pred eEEEEccCCC-ceEEEEecCceEEEEeec
Confidence 9999999999 588899999999999985
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a | Back alignment and structure |
|---|
Probab=99.94 E-value=4.2e-26 Score=202.16 Aligned_cols=273 Identities=12% Similarity=0.111 Sum_probs=190.8
Q ss_pred cccCceeeEecCC-cccccCCCCccccccCcceeeec---cccCCCC-CcEEEEEEecCCCccccccCCcccCCCCcccC
Q psy4579 39 LEWPSLTAQWLPD-VTSVQLPNEDAQFDASNYDTDKG---THTSDEQ-NHLLIASVQLPNEDAQFDASNYDTDKGGNVQL 113 (368)
Q Consensus 39 ~~~~~~~~~~~p~-~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i 113 (368)
+.-+|.+++|+|+ +++|++||.|+.+++|+...... ....... ....|.++.|.+++..+... +.||.|++
T Consensus 37 H~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~----~~d~~i~~ 112 (340)
T 4aow_A 37 HNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSG----SWDGTLRL 112 (340)
T ss_dssp CSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEE----ETTSEEEE
T ss_pred ccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEE----cccccceE
Confidence 4678999999998 68899999999997776543211 1111111 12347778886655444332 35899999
Q ss_pred CCCCe-eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCC
Q psy4579 114 PNEDA-QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPS 192 (368)
Q Consensus 114 ~~~~~-~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~ 192 (368)
|+... ........+...+.++.+++++ ..|++|+.|+.+++||+..... ......+|...+. .++|+++
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~s~s~d~~~~~~d~~~~~~------~~~~~~~~~~~v~---~~~~~~~ 182 (340)
T 4aow_A 113 WDLTTGTTTRRFVGHTKDVLSVAFSSDN-RQIVSGSRDKTIKLWNTLGVCK------YTVQDESHSEWVS---CVRFSPN 182 (340)
T ss_dssp EETTTTEEEEEEECCSSCEEEEEECTTS-SCEEEEETTSCEEEECTTSCEE------EEECSSSCSSCEE---EEEECSC
T ss_pred EeecccceeeeecCCCCceeEEEEeecC-ccceeecCCCeEEEEEeCCCce------EEEEeccccCccc---ceEEccC
Confidence 98865 3444556688889999999998 8999999999999999876532 3345667888886 8999876
Q ss_pred C-CCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee--ecccccCCCCccceEEEEeecCCccccc
Q psy4579 193 L-NGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LILGTHTSDEQNHLLIASVQLPNEDAQF 269 (368)
Q Consensus 193 ~-~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 269 (368)
. ..++++++.|+.|++||+++. .+...+.+|...|++++|+| .++++++.|+.+
T Consensus 183 ~~~~~~~s~~~d~~i~i~d~~~~-------~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i---------------- 239 (340)
T 4aow_A 183 SSNPIIVSCGWDKLVKVWNLANC-------KLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQA---------------- 239 (340)
T ss_dssp SSSCEEEEEETTSCEEEEETTTT-------EEEEEECCCSSCEEEEEECTTSSEEEEEETTCEE----------------
T ss_pred CCCcEEEEEcCCCEEEEEECCCC-------ceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeE----------------
Confidence 3 346889999999999999887 45677889999999999986 344444444433
Q ss_pred ccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceee
Q psy4579 270 DASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRL 349 (368)
Q Consensus 270 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 349 (368)
.+|+..+.+....+. +...|.+++|+|++ .++ +++.|+.|++||++......... ........
T Consensus 240 ------------~iwd~~~~~~~~~~~--~~~~v~~~~~~~~~-~~~-~~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~ 302 (340)
T 4aow_A 240 ------------MLWDLNEGKHLYTLD--GGDIINALCFSPNR-YWL-CAATGPSIKIWDLEGKIIVDELK-QEVISTSS 302 (340)
T ss_dssp ------------EEEETTTTEEEEEEE--CSSCEEEEEECSSS-SEE-EEEETTEEEEEETTTTEEEEEEC-CC------
T ss_pred ------------EEEEeccCceeeeec--CCceEEeeecCCCC-cee-eccCCCEEEEEECCCCeEEEecc-ccceeeec
Confidence 334444455554443 56789999999988 566 66789999999997522111000 01112234
Q ss_pred ecccCceeeecceeee
Q psy4579 350 RGHQKEGLIEGTYNCY 365 (368)
Q Consensus 350 ~gh~~~V~~l~w~p~~ 365 (368)
.+|...|++++|+|+.
T Consensus 303 ~~h~~~v~~l~~s~dg 318 (340)
T 4aow_A 303 KAEPPQCTSLAWSADG 318 (340)
T ss_dssp -CCCCCEEEEEECTTS
T ss_pred cCCCCCEEEEEECCCC
Confidence 6899999999999974
|
| >3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.5e-26 Score=206.37 Aligned_cols=285 Identities=12% Similarity=0.083 Sum_probs=190.0
Q ss_pred hhhhhhhhhcCcchheeecccccccCceeeEecCC---cccccCCCCccccccCcceeeeccccCC-CCCcEEEEEEec-
Q psy4579 17 NEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPD---VTSVQLPNEDAQFDASNYDTDKGTHTSD-EQNHLLIASVQL- 91 (368)
Q Consensus 17 ~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~p~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~- 91 (368)
+...++|+.....+.... ......++.+++|+|+ ++.|++++.|+.+.+|+...... .... ......|.++.+
T Consensus 43 d~~v~iw~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~-~~~~~~~~~~~v~~~~~~ 120 (357)
T 3i2n_A 43 TGVIQLYEIQHGDLKLLR-EIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEM-PVYSVKGHKEIINAIDGI 120 (357)
T ss_dssp CEEEEEEEECSSSEEEEE-EEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSS-CSEEECCCSSCEEEEEEE
T ss_pred CcEEEEEeCCCCccccee-eecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCc-cEEEEEecccceEEEeec
Confidence 456788988776543322 2245678999999999 69999999999997765543220 1111 112233555543
Q ss_pred -----CCCccccccCCcccCCCCcccCCCCCee--eeeccccCC----CCceeeE----ecCCCCCeeEEEeCCCcEEEE
Q psy4579 92 -----PNEDAQFDASNYDTDKGGNVQLPNEDAQ--FDASNYDTD----KGGYGLS----WNPSLNGYLLSASDDHTICLW 156 (368)
Q Consensus 92 -----~~~~~~~~~~~~~~~~~g~i~i~~~~~~--~~~~~~~h~----~~v~~l~----~sp~~~~~lasg~~dg~v~iw 156 (368)
.+....+. .+ +.||.|++|+.... ....+..|. ..|.+++ |+|++ .+|++++.||.|++|
T Consensus 121 ~~~~~s~~~~~l~-~~---~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~l~~~~~d~~i~i~ 195 (357)
T 3i2n_A 121 GGLGIGEGAPEIV-TG---SRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEE-RVVCAGYDNGDIKLF 195 (357)
T ss_dssp SGGGCC-CCCEEE-EE---ETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CC-CEEEEEETTSEEEEE
T ss_pred cccccCCCccEEE-EE---eCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCC-CEEEEEccCCeEEEE
Confidence 23333332 22 46899999998753 233443333 3899998 78898 899999999999999
Q ss_pred eCCCCCCCCcccccceeeeccccceecceeeEEeC---CCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeeccccc
Q psy4579 157 DINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNP---SLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAV 233 (368)
Q Consensus 157 d~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p---~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 233 (368)
|++++. ......|...+. +++|+| + +.+|++|+.||.|++||++++...... ....+.+|...
T Consensus 196 d~~~~~--------~~~~~~~~~~v~---~~~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~--~~~~~~~~~~~ 261 (357)
T 3i2n_A 196 DLRNMA--------LRWETNIKNGVC---SLEFDRKDIS-MNKLVATSLEGKFHVFDMRTQHPTKGF--ASVSEKAHKST 261 (357)
T ss_dssp ETTTTE--------EEEEEECSSCEE---EEEESCSSSS-CCEEEEEESTTEEEEEEEEEEETTTEE--EEEEEECCSSC
T ss_pred ECccCc--------eeeecCCCCceE---EEEcCCCCCC-CCEEEEECCCCeEEEEeCcCCCcccce--eeeccCCCcCC
Confidence 998763 244567888886 999999 6 899999999999999999876322110 01134489999
Q ss_pred EeEEEEee---ecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeC
Q psy4579 234 VEDYSIHR---LILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMP 310 (368)
Q Consensus 234 v~~v~~~~---~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p 310 (368)
|.+++|+| .++.+++.|+.+++|........ .. .+. .+..... ..+.+....+. +|...|++++|+|
T Consensus 262 v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~--~~-----~~~-~g~~~~~-~~~~~~~~~~~-~~~~~v~~~~~s~ 331 (357)
T 3i2n_A 262 VWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQR--SK-----KDS-EGIEMGV-AGSVSLLQNVT-LSTQPISSLDWSP 331 (357)
T ss_dssp EEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC---------CCT-TSCCCCC-CCEEEEEEEEE-CCSSCEEEEEECS
T ss_pred EEEEEECCCCCcEEEEEeCCCcEEEeecCCCccc--cc-----ccC-CCCcccc-ccccceeeccc-cCCCCeeEEEEcC
Confidence 99999986 27888888888888766532111 00 000 0000000 00112333344 8999999999999
Q ss_pred CCCcEEEEecCCCeEEEEECCC
Q psy4579 311 QNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 311 ~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
++..++++|+.||.|++||+.+
T Consensus 332 ~~~~l~~s~~~d~~i~iw~~~~ 353 (357)
T 3i2n_A 332 DKRGLCVCSSFDQTVRVLIVTK 353 (357)
T ss_dssp SSTTEEEEEETTSEEEEEEECC
T ss_pred CCCeEEEEecCCCcEEEEECCC
Confidence 9965555899999999999975
|
| >2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.94 E-value=7.9e-27 Score=232.11 Aligned_cols=178 Identities=12% Similarity=0.094 Sum_probs=128.7
Q ss_pred hhhhhhhhhhcCcchheeecccccccCceeeEecCCcccccCCCCccccccCcceeeeccccCCCCCcEEEEEEecCCCc
Q psy4579 16 INEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNED 95 (368)
Q Consensus 16 ~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 95 (368)
.+...++|......+. .......+|.+++|+| +++|++++.|+.+++|+.+. +...........|.++.+.+..
T Consensus 37 ~Dg~I~lw~~~~~~~~---~~~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~--~~~~~~~~~~~~V~~v~~sp~g 110 (902)
T 2oaj_A 37 VTGEVHIYGQQQVEVV---IKLEDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYS--QKVLTTVFVPGKITSIDTDASL 110 (902)
T ss_dssp TTSEEEEECSTTCEEE---EECSSCCCEEEEEEET-TTEEEEEETTCEEEEEETTT--CSEEEEEECSSCEEEEECCTTC
T ss_pred CCCEEEEEeCCCcEEE---EEcCCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCC--CcEEEEEcCCCCEEEEEECCCC
Confidence 3456788876654332 1223456899999999 88999999999997776543 2222111112347788886655
Q ss_pred cccccCCcccCCCCcccCCCCCeeee------------eccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCC
Q psy4579 96 AQFDASNYDTDKGGNVQLPNEDAQFD------------ASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPK 163 (368)
Q Consensus 96 ~~~~~~~~~~~~~g~i~i~~~~~~~~------------~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~ 163 (368)
..+.. + +.||.|++|+.+.... ....+|.+.|++++|+|++...|++|+.||.| +||++++.
T Consensus 111 ~~l~s-g---s~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~- 184 (902)
T 2oaj_A 111 DWMLI-G---LQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENE- 184 (902)
T ss_dssp SEEEE-E---ETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTE-
T ss_pred CEEEE-E---cCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCc-
Confidence 44332 2 3589999999875332 23467999999999999754799999999999 99998763
Q ss_pred CCcccccceeeecc------------------ccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCC
Q psy4579 164 ENRVIDAKTIFTGH------------------TAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATP 215 (368)
Q Consensus 164 ~~~~~~~~~~~~~h------------------~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~ 215 (368)
+...+.+| ...|. +++|+|+ +.+|++|+.||+|++||++++.
T Consensus 185 ------~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~---~v~fspd-g~~lasgs~Dg~i~lWd~~~g~ 244 (902)
T 2oaj_A 185 ------IKQSFIYELPPFAPGGDFSEKTNEKRTPKVI---QSLYHPN-SLHIITIHEDNSLVFWDANSGH 244 (902)
T ss_dssp ------EEEEECCCBCTTCCCSTTCCCTTSCBCCCEE---EEEECTT-SSEEEEEETTCCEEEEETTTCC
T ss_pred ------eEEEEecccCCcCCCcccccccccccCCCeE---EEEEcCC-CCEEEEEECCCeEEEEECCCCc
Confidence 33444444 56675 9999999 9999999999999999998863
|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A | Back alignment and structure |
|---|
Probab=99.94 E-value=2.2e-27 Score=212.39 Aligned_cols=273 Identities=12% Similarity=0.105 Sum_probs=187.6
Q ss_pred hhhhhhhhhcCcchheeecccc---cccCceeeEecCC----cccccCCCCccccccCcceeeeccccCCC-CCcEEEEE
Q psy4579 17 NEEYKIWKKNTPFLYDLVMTHA---LEWPSLTAQWLPD----VTSVQLPNEDAQFDASNYDTDKGTHTSDE-QNHLLIAS 88 (368)
Q Consensus 17 ~~~~~~w~~~~~~~~~~~~~~~---~~~~~~~~~~~p~----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~ 88 (368)
++..++|+.........+..+. ...++.+++|+|+ +++|++|+.||.+.+|+.. .+...... .....|.+
T Consensus 43 ~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~--~~~~~~~~~~~~~~i~~ 120 (366)
T 3k26_A 43 SNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPI--TMQCIKHYVGHGNAINE 120 (366)
T ss_dssp TTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTT--TCCEEEEEESCCSCEEE
T ss_pred CCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEch--hceEeeeecCCCCcEEE
Confidence 3457888887665544444433 4567999999999 6789999999999777544 23222221 12345778
Q ss_pred EecCCCccccccCCcccCCCCcccCCCCCe-eeeecc---ccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCC
Q psy4579 89 VQLPNEDAQFDASNYDTDKGGNVQLPNEDA-QFDASN---YDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKE 164 (368)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~-~~~~~~---~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~ 164 (368)
+.+.+.+....+++ +.||.|++|+... +....+ ..|...|.+++|+|++ .+|++++.||.|++||++++...
T Consensus 121 ~~~~~~~~~~l~s~---~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~ 196 (366)
T 3k26_A 121 LKFHPRDPNLLLSV---SKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLG-EKIMSCGMDHSLKLWRINSKRMM 196 (366)
T ss_dssp EEECSSCTTEEEEE---ETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTS-SEEEEEETTSCEEEEESCSHHHH
T ss_pred EEECCCCCCEEEEE---eCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCC-CEEEEecCCCCEEEEECCCCccc
Confidence 88865333333333 3589999999875 333333 5799999999999998 89999999999999999865311
Q ss_pred Ccc---------------------cccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCc----
Q psy4579 165 NRV---------------------IDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENR---- 219 (368)
Q Consensus 165 ~~~---------------------~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~---- 219 (368)
... ........+|...|. +++|+ +++|++++.||.|++||+++......
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~---~~~~~---~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~ 270 (366)
T 3k26_A 197 NAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVD---CVRWL---GDLILSKSCENAIVCWKPGKMEDDIDKIKP 270 (366)
T ss_dssp HHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCC---EEEEE---TTEEEEECSSSEEEEEEESSTTCCGGGCCT
T ss_pred cccceeEEecCCCCcccccceeeccCccccccCCcceEE---EEEEc---CCEEEEEecCCEEEEEeCCCcccccccccc
Confidence 000 001223344888886 99998 56999999999999999987643111
Q ss_pred ---cccceeeeecccccEeEEEEeee----cccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCce-
Q psy4579 220 ---VIDAKTIFTGHTAVVEDYSIHRL----ILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKI- 291 (368)
Q Consensus 220 ---~~~~~~~~~~~~~~v~~v~~~~~----~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~- 291 (368)
....+..+.+|...|.+++|++. .+++++.++.+++| +..+++.
T Consensus 271 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vw----------------------------d~~~~~~~ 322 (366)
T 3k26_A 271 SESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVW----------------------------DLEVEDPH 322 (366)
T ss_dssp TCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEE----------------------------ECCSSSGG
T ss_pred CCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEE----------------------------ECCCCCCc
Confidence 11235667778888988888753 44555544444443 3333321
Q ss_pred ---eeeeecCc--ccceeEEEEeCCCCcEEEEecCCCeEEEEECC
Q psy4579 292 ---EIEIKINH--EGEVNRARYMPQNPCVIATKTPSSDVLVFDYT 331 (368)
Q Consensus 292 ---~~~~~~~h--~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~ 331 (368)
...+. +| ...|++++|+|++ .+|++|+.||.|++||+.
T Consensus 323 ~~~~~~~~-~~~~~~~v~~~~~s~~~-~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 323 KAKCTTLT-HHKCGAAIRQTSFSRDS-SILIAVCDDASIWRWDRL 365 (366)
T ss_dssp GCEEEEEC-CTTCCSCEEEEEECTTS-SEEEEEETTSEEEEEEC-
T ss_pred cccceEEc-ccccCCceEEEEeCCCC-CeEEEEeCCCEEEEEEec
Confidence 12333 55 7999999999999 688899999999999985
|
| >4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A | Back alignment and structure |
|---|
Probab=99.94 E-value=2.7e-26 Score=206.06 Aligned_cols=245 Identities=8% Similarity=0.036 Sum_probs=170.1
Q ss_pred CceeeEecC---------CcccccCCCCccccccCcceeeecc-------ccCC-CCCcEEEEEEecCCCcccc-ccCCc
Q psy4579 42 PSLTAQWLP---------DVTSVQLPNEDAQFDASNYDTDKGT-------HTSD-EQNHLLIASVQLPNEDAQF-DASNY 103 (368)
Q Consensus 42 ~~~~~~~~p---------~~~~l~~~~~~~~~~~~~~~~~~~~-------~~~~-~~~~~~i~~~~~~~~~~~~-~~~~~ 103 (368)
.+.++++.+ ++.+|+.++.++.+++|......+. .... .....++..+.|.+++..+ .+++
T Consensus 75 ~v~s~~~~~~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~- 153 (365)
T 4h5i_A 75 SPTAIDASKGIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASS- 153 (365)
T ss_dssp CCCEEEEETTEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEES-
T ss_pred ceEEEEeCCCEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEEC-
Confidence 455666654 3556777778888866654322110 0011 1122346667776655443 2333
Q ss_pred ccCCCCcccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceec
Q psy4579 104 DTDKGGNVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEV 183 (368)
Q Consensus 104 ~~~~~g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~ 183 (368)
+.|++|++||...........|...|++++|+|+| ++|++++.|+ +++|+..++... ......+|...++
T Consensus 154 --~~d~~i~iwd~~~~~~~~~~~~~~~V~~v~fspdg-~~l~s~s~~~-~~~~~~~~~~~~-----~~~~~~~~~~~v~- 223 (365)
T 4h5i_A 154 --KVPAIMRIIDPSDLTEKFEIETRGEVKDLHFSTDG-KVVAYITGSS-LEVISTVTGSCI-----ARKTDFDKNWSLS- 223 (365)
T ss_dssp --CSSCEEEEEETTTTEEEEEEECSSCCCEEEECTTS-SEEEEECSSC-EEEEETTTCCEE-----EEECCCCTTEEEE-
T ss_pred --CCCCEEEEeECCCCcEEEEeCCCCceEEEEEccCC-ceEEecccee-EEEEEeccCcce-----eeeecCCCCCCEE-
Confidence 45899999998865555556788999999999999 9999998554 556666555321 1234567888886
Q ss_pred ceeeEEeCCCCCeEEEeeCCC----cEEEEECCCCCCCCccccceeeeecccccEeEEEEee--ecccccCCCCccceEE
Q psy4579 184 RYGLSWNPSLNGYLLSASDDH----TICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LILGTHTSDEQNHLLI 257 (368)
Q Consensus 184 ~~~i~~~p~~~~~l~s~s~dg----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~d~~~~~~~ 257 (368)
+++|+|+ +.++++++.|+ .+++||+...... ......+.+|...|++++|+| .++++++.|+.
T Consensus 224 --~v~fspd-g~~l~~~s~d~~~~~~i~~~~~~~~~~~---~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~----- 292 (365)
T 4h5i_A 224 --KINFIAD-DTVLIAASLKKGKGIVLTKISIKSGNTS---VLRSKQVTNRFKGITSMDVDMKGELAVLASNDNS----- 292 (365)
T ss_dssp --EEEEEET-TEEEEEEEESSSCCEEEEEEEEETTEEE---EEEEEEEESSCSCEEEEEECTTSCEEEEEETTSC-----
T ss_pred --EEEEcCC-CCEEEEEecCCcceeEEeecccccceec---ceeeeeecCCCCCeEeEEECCCCCceEEEcCCCE-----
Confidence 9999999 89999999887 6888998765211 112345778999999999986 34455544444
Q ss_pred EEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCC
Q psy4579 258 ASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 258 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
+.+|+..+++++..+..+|...|++++|+|++ .+|||||.|++|+|||+..
T Consensus 293 -----------------------V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg-~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 293 -----------------------IALVKLKDLSMSKIFKQAHSFAITEVTISPDS-TYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp -----------------------EEEEETTTTEEEEEETTSSSSCEEEEEECTTS-CEEEEEETTSEEEEEECCT
T ss_pred -----------------------EEEEECCCCcEEEEecCcccCCEEEEEECCCC-CEEEEEeCCCeEEEEEcCC
Confidence 44455556777777666899999999999999 6889999999999999964
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.6e-25 Score=206.44 Aligned_cols=296 Identities=14% Similarity=0.147 Sum_probs=212.9
Q ss_pred hhhhhcCcchheeecccccccCceeeEecCCcccccCCCCccccccCcceeeeccccCCC-CCcEEEEEEecCCCccccc
Q psy4579 21 KIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDE-QNHLLIASVQLPNEDAQFD 99 (368)
Q Consensus 21 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~ 99 (368)
++|+...+.....+..|. ...+.+ +.+++++|++|+.||.+++|+.. .+...... .....|.++.+.. . ..
T Consensus 101 ~~w~~~~~~~~~~l~~h~-~~v~~~--~~~~g~~l~sg~~dg~i~vwd~~--~~~~~~~~~~h~~~v~~~~~~~--~-~l 172 (445)
T 2ovr_B 101 TNWRRGELKSPKVLKGHD-DHVITC--LQFCGNRIVSGSDDNTLKVWSAV--TGKCLRTLVGHTGGVWSSQMRD--N-II 172 (445)
T ss_dssp HHHHHSCCCCCEEEECST-TSCEEE--EEEETTEEEEEETTSCEEEEETT--TCCEEEECCCCSSCEEEEEEET--T-EE
T ss_pred hcccCCCcceeEEecccC-CCcEEE--EEEcCCEEEEEECCCcEEEEECC--CCcEEEEEcCCCCCEEEEEecC--C-EE
Confidence 467776654444444332 122334 55578999999999999777654 33322221 1122355555542 1 22
Q ss_pred cCCcccCCCCcccCCCCCe-eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccc
Q psy4579 100 ASNYDTDKGGNVQLPNEDA-QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHT 178 (368)
Q Consensus 100 ~~~~~~~~~g~i~i~~~~~-~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~ 178 (368)
+++ +.||.|++|+... +....+.+|...|.+++|++ +.+++|+.||+|++||+.++. ....+.+|.
T Consensus 173 ~s~---~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~---~~l~s~s~dg~i~~wd~~~~~-------~~~~~~~~~ 239 (445)
T 2ovr_B 173 ISG---STDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE---KRVVSGSRDATLRVWDIETGQ-------CLHVLMGHV 239 (445)
T ss_dssp EEE---ETTSCEEEEETTTTEEEEEECCCSSCEEEEEEET---TEEEEEETTSEEEEEESSSCC-------EEEEEECCS
T ss_pred EEE---eCCCeEEEEECCcCcEEEEECCCCCcEEEEEecC---CEEEEEeCCCEEEEEECCCCc-------EEEEEcCCc
Confidence 222 4689999999864 56667788999999999963 689999999999999998764 567888999
Q ss_pred cceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeeecccccCCCCccceEEE
Q psy4579 179 AVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIA 258 (368)
Q Consensus 179 ~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~ 258 (368)
..+. +++| + +.++++|+.||.|++||++++ .++..+.+|...|.+++|+...+.+++.|+.+++|..
T Consensus 240 ~~v~---~~~~--~-~~~l~~~~~dg~i~iwd~~~~-------~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~i~d~ 306 (445)
T 2ovr_B 240 AAVR---CVQY--D-GRRVVSGAYDFMVKVWDPETE-------TCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDV 306 (445)
T ss_dssp SCEE---EEEE--C-SSCEEEEETTSCEEEEEGGGT-------EEEEEECCCSSCEEEEEECSSEEEEEETTSCEEEEET
T ss_pred ccEE---EEEE--C-CCEEEEEcCCCEEEEEECCCC-------cEeEEecCCCCceEEEEECCCEEEEEeCCCeEEEEEC
Confidence 9996 8988 4 788999999999999999886 4577888999999999998888888888888888742
Q ss_pred Ee-----ecCCc----------ccccccccccCCCCCcccccCCCCceeeeeec--CcccceeEEEEeCCCCcEEEEecC
Q psy4579 259 SV-----QLPNE----------DAQFDASNYDTDKGDFGGFGSVSGKIEIEIKI--NHEGEVNRARYMPQNPCVIATKTP 321 (368)
Q Consensus 259 ~~-----~~~~~----------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~--~h~~~i~~~~~~p~~~~~lasgs~ 321 (368)
.. .+... +..+... ...+.+.+|+..+++....+.. .|...|.+++|++ .+|++|+.
T Consensus 307 ~~~~~~~~~~~~~~~v~~~~~~~~~l~~~---~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~l~s~~~ 380 (445)
T 2ovr_B 307 ETGNCIHTLTGHQSLTSGMELKDNILVSG---NADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNK---NFVITSSD 380 (445)
T ss_dssp TTCCEEEEECCCCSCEEEEEEETTEEEEE---ETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEECS---SEEEEEET
T ss_pred CCCCEEEEEcCCcccEEEEEEeCCEEEEE---eCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEECC---CEEEEEeC
Confidence 11 01111 1111111 2346788899988887776652 3889999999963 57889999
Q ss_pred CCeEEEEECCCCCCCCCCCCCCCCceee-----ecccCceeeecceeeee
Q psy4579 322 SSDVLVFDYTKHPSKPDPNGECHPDLRL-----RGHQKEGLIEGTYNCYL 366 (368)
Q Consensus 322 Dg~i~iwd~~~~~~~~~~~~~~~~~~~~-----~gh~~~V~~l~w~p~~~ 366 (368)
||.|++||++. ...+..+ .+|.+.|++++|+|...
T Consensus 381 dg~v~iwd~~~----------~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 420 (445)
T 2ovr_B 381 DGTVKLWDLKT----------GEFIRNLVTLESGGSGGVVWRIRASNTKL 420 (445)
T ss_dssp TSEEEEEETTT----------CCEEEEEEECTTGGGTCEEEEEEECSSEE
T ss_pred CCeEEEEECCC----------CceeeeeeccccCCCCceEEEEEecCCEE
Confidence 99999999975 2333344 47899999999999753
|
| >3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.94 E-value=4.3e-26 Score=199.59 Aligned_cols=254 Identities=16% Similarity=0.172 Sum_probs=187.8
Q ss_pred hhhhhhhhhcCcchheeecccccccCceeeEecCCcccccCCCCccccccCcceee-eccccCC-CCCcEEEEEEecCCC
Q psy4579 17 NEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTD-KGTHTSD-EQNHLLIASVQLPNE 94 (368)
Q Consensus 17 ~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~i~~~~~~~~ 94 (368)
+...++|+.........+..+ ..++.+++|+|+++.+++++.++.+.+|+.... .+..... ......+.++.+.
T Consensus 38 dg~v~vw~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-- 113 (313)
T 3odt_A 38 DGTVRLWSKDDQWLGTVVYTG--QGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSFQ-- 113 (313)
T ss_dssp TSEEEEEEESSSEEEEEEEEC--SSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEEE--
T ss_pred CCcEEEEECCCCEEEEEeecC--CccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEec--
Confidence 456788988776655555444 678999999999999999999999866643222 1111111 1122345666662
Q ss_pred ccccccCCcccCCCCcccCCCCCeeeeeccccCCCCceeeEecC-CCCCeeEEEeCCCcEEEEeCCCCCCCCccccccee
Q psy4579 95 DAQFDASNYDTDKGGNVQLPNEDAQFDASNYDTDKGGYGLSWNP-SLNGYLLSASDDHTICLWDINATPKENRVIDAKTI 173 (368)
Q Consensus 95 ~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp-~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~ 173 (368)
+..+ +.+ +.||.|++|+ .......+..|...|.+++|+| ++ +.+++++.||.|++||... ....
T Consensus 114 ~~~l-~~~---~~d~~i~~~d-~~~~~~~~~~~~~~v~~~~~~~~~~-~~l~~~~~d~~i~i~d~~~---------~~~~ 178 (313)
T 3odt_A 114 DGVV-ISG---SWDKTAKVWK-EGSLVYNLQAHNASVWDAKVVSFSE-NKFLTASADKTIKLWQNDK---------VIKT 178 (313)
T ss_dssp TTEE-EEE---ETTSEEEEEE-TTEEEEEEECCSSCEEEEEEEETTT-TEEEEEETTSCEEEEETTE---------EEEE
T ss_pred CCEE-EEE---eCCCCEEEEc-CCcEEEecccCCCceeEEEEccCCC-CEEEEEECCCCEEEEecCc---------eEEE
Confidence 2222 222 3589999999 5566667778999999999998 65 8999999999999999432 3466
Q ss_pred eec-cccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeee-cccccCCCC
Q psy4579 174 FTG-HTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRL-ILGTHTSDE 251 (368)
Q Consensus 174 ~~~-h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~-~~~~~~~d~ 251 (368)
+.. |...+. +++|+|+ +. +++++.||.|++||++++ .++..+.+|...|.+++|++. .+.+++.
T Consensus 179 ~~~~~~~~i~---~~~~~~~-~~-~~~~~~dg~i~i~d~~~~-------~~~~~~~~~~~~i~~~~~~~~~~l~~~~~-- 244 (313)
T 3odt_A 179 FSGIHNDVVR---HLAVVDD-GH-FISCSNDGLIKLVDMHTG-------DVLRTYEGHESFVYCIKLLPNGDIVSCGE-- 244 (313)
T ss_dssp ECSSCSSCEE---EEEEEET-TE-EEEEETTSEEEEEETTTC-------CEEEEEECCSSCEEEEEECTTSCEEEEET--
T ss_pred EeccCcccEE---EEEEcCC-Ce-EEEccCCCeEEEEECCch-------hhhhhhhcCCceEEEEEEecCCCEEEEec--
Confidence 666 888886 9999997 55 999999999999999887 457788889999999999862 2222222
Q ss_pred ccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECC
Q psy4579 252 QNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYT 331 (368)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~ 331 (368)
.+.+.+|+..+++....+. .|...|.+++|+|++ .++ +++.||.|++||++
T Consensus 245 --------------------------dg~v~iwd~~~~~~~~~~~-~~~~~i~~~~~~~~~-~~~-~~~~dg~i~iw~~~ 295 (313)
T 3odt_A 245 --------------------------DRTVRIWSKENGSLKQVIT-LPAISIWSVDCMSNG-DII-VGSSDNLVRIFSQE 295 (313)
T ss_dssp --------------------------TSEEEEECTTTCCEEEEEE-CSSSCEEEEEECTTS-CEE-EEETTSCEEEEESC
T ss_pred --------------------------CCEEEEEECCCCceeEEEe-ccCceEEEEEEccCC-CEE-EEeCCCcEEEEeCC
Confidence 2335555666676666665 789999999999999 455 78999999999998
Q ss_pred C
Q psy4579 332 K 332 (368)
Q Consensus 332 ~ 332 (368)
.
T Consensus 296 ~ 296 (313)
T 3odt_A 296 K 296 (313)
T ss_dssp G
T ss_pred C
Confidence 6
|
| >3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.94 E-value=7.1e-26 Score=220.30 Aligned_cols=222 Identities=18% Similarity=0.172 Sum_probs=168.3
Q ss_pred EEEEEEecCCCccccccCCcccCCCCcccCCCCCe------eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEe
Q psy4579 84 LLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDA------QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWD 157 (368)
Q Consensus 84 ~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~------~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd 157 (368)
..|.++.+++.+..+.+++ +.||+|++|+... .....+.+|...|.+++|+|++ ++|++|+.||+|++||
T Consensus 383 ~~V~~v~~~~~~~~~l~s~---s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g-~~l~sgs~Dg~v~vwd 458 (694)
T 3dm0_A 383 DMVTAIATPIDNADIIVSA---SRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDG-QFALSGSWDGELRLWD 458 (694)
T ss_dssp SCEEEEECCTTCCSEEEEE---ETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTS-SEEEEEETTSEEEEEE
T ss_pred ceeEEEEecCCCCCEEEEE---eCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCC-CEEEEEeCCCcEEEEE
Confidence 3577888876554444443 4699999998753 2345677899999999999999 9999999999999999
Q ss_pred CCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEE
Q psy4579 158 INATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDY 237 (368)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v 237 (368)
+.++. ....+.+|...|. +++|+|+ +.+|+||+.|++|++||+..... ........+|...|.++
T Consensus 459 ~~~~~-------~~~~~~~h~~~v~---~~~~s~~-~~~l~s~s~D~~i~iwd~~~~~~----~~~~~~~~~h~~~v~~~ 523 (694)
T 3dm0_A 459 LAAGV-------STRRFVGHTKDVL---SVAFSLD-NRQIVSASRDRTIKLWNTLGECK----YTISEGGEGHRDWVSCV 523 (694)
T ss_dssp TTTTE-------EEEEEECCSSCEE---EEEECTT-SSCEEEEETTSCEEEECTTSCEE----EEECSSTTSCSSCEEEE
T ss_pred CCCCc-------ceeEEeCCCCCEE---EEEEeCC-CCEEEEEeCCCEEEEEECCCCcc----eeeccCCCCCCCcEEEE
Confidence 98764 4678899999996 9999998 89999999999999999865411 00111224688899999
Q ss_pred EEeee----cccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCC
Q psy4579 238 SIHRL----ILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNP 313 (368)
Q Consensus 238 ~~~~~----~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~ 313 (368)
+|++. .+.+++.|+.+++ |++.+++....+. +|.+.|++++|+|++
T Consensus 524 ~~~~~~~~~~l~s~s~d~~v~v----------------------------wd~~~~~~~~~~~-~h~~~v~~v~~spdg- 573 (694)
T 3dm0_A 524 RFSPNTLQPTIVSASWDKTVKV----------------------------WNLSNCKLRSTLA-GHTGYVSTVAVSPDG- 573 (694)
T ss_dssp EECSCSSSCEEEEEETTSCEEE----------------------------EETTTCCEEEEEC-CCSSCEEEEEECTTS-
T ss_pred EEeCCCCcceEEEEeCCCeEEE----------------------------EECCCCcEEEEEc-CCCCCEEEEEEeCCC-
Confidence 99862 3444444444444 4444455555554 899999999999999
Q ss_pred cEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeecccCceeeecceeee
Q psy4579 314 CVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 314 ~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p~~ 365 (368)
.+|++|+.||+|++||++. ...+..+ .+...|.+++|+|+.
T Consensus 574 ~~l~sg~~Dg~i~iwd~~~----------~~~~~~~-~~~~~v~~~~~sp~~ 614 (694)
T 3dm0_A 574 SLCASGGKDGVVLLWDLAE----------GKKLYSL-EANSVIHALCFSPNR 614 (694)
T ss_dssp SEEEEEETTSBCEEEETTT----------TEEEECC-BCSSCEEEEEECSSS
T ss_pred CEEEEEeCCCeEEEEECCC----------CceEEEe-cCCCcEEEEEEcCCC
Confidence 6888999999999999975 2333333 345689999999874
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X | Back alignment and structure |
|---|
Probab=99.94 E-value=1.9e-26 Score=208.98 Aligned_cols=262 Identities=9% Similarity=0.031 Sum_probs=188.0
Q ss_pred hhhhhhhhhcCcc------hheeecccccccCceeeEecCC----c---ccccCCCCccccccCcceeeec-----cccC
Q psy4579 17 NEEYKIWKKNTPF------LYDLVMTHALEWPSLTAQWLPD----V---TSVQLPNEDAQFDASNYDTDKG-----THTS 78 (368)
Q Consensus 17 ~~~~~~w~~~~~~------~~~~~~~~~~~~~~~~~~~~p~----~---~~l~~~~~~~~~~~~~~~~~~~-----~~~~ 78 (368)
+...++|+..... +...+. ...-++.+++|+|+ + ++|++++.|+.+.+|+...... ....
T Consensus 35 dg~i~iw~~~~~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~ 112 (397)
T 1sq9_A 35 DGYLKVWDNKLLDNENPKDKSYSHF--VHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKL 112 (397)
T ss_dssp TSEEEEEESBCCTTCCGGGGEEEEE--CCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEE
T ss_pred CCEEEEEECCCcccccCCCcceEEe--cCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceee
Confidence 4467788887765 333333 34568999999999 9 9999999999996665443321 1111
Q ss_pred C-CCC---cEEEEEEecC----CCccc-cccCCcccCCCCcccCCCCCe------e-eee-----cc-------ccCCCC
Q psy4579 79 D-EQN---HLLIASVQLP----NEDAQ-FDASNYDTDKGGNVQLPNEDA------Q-FDA-----SN-------YDTDKG 130 (368)
Q Consensus 79 ~-~~~---~~~i~~~~~~----~~~~~-~~~~~~~~~~~g~i~i~~~~~------~-~~~-----~~-------~~h~~~ 130 (368)
. ... ...|.++.+. +.... +.+. +.||.|++|+... . ... .+ ..|...
T Consensus 113 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~----~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (397)
T 1sq9_A 113 DLLDSDMKKHSFWALKWGASNDRLLSHRLVAT----DVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQF 188 (397)
T ss_dssp CCSCTTGGGSCEEEEEEECCC----CEEEEEE----ETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCC
T ss_pred cccccccCCCcEEEEEEeeccCCCCceEEEEE----eCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCC
Confidence 1 111 2457777776 54444 3332 3589999999765 2 222 33 448999
Q ss_pred ceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeec---c---ccceecceeeEEeCCCCCeEEEeeCC-
Q psy4579 131 GYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTG---H---TAVVEVRYGLSWNPSLNGYLLSASDD- 203 (368)
Q Consensus 131 v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~---h---~~~v~~~~~i~~~p~~~~~l~s~s~d- 203 (368)
|.+++|+|++ +|++|+.||.|++||+++.. +...+.. | ...+. +++|+|+ +.+|++++.|
T Consensus 189 i~~~~~~~~~--~l~~~~~dg~i~i~d~~~~~-------~~~~~~~~~~h~~~~~~i~---~i~~~~~-~~~l~~~~~d~ 255 (397)
T 1sq9_A 189 ATSVDISERG--LIATGFNNGTVQISELSTLR-------PLYNFESQHSMINNSNSIR---SVKFSPQ-GSLLAIAHDSN 255 (397)
T ss_dssp CCEEEECTTS--EEEEECTTSEEEEEETTTTE-------EEEEEECCC---CCCCCEE---EEEECSS-TTEEEEEEEET
T ss_pred ceEEEECCCc--eEEEEeCCCcEEEEECCCCc-------eeEEEeccccccccCCccc---eEEECCC-CCEEEEEecCC
Confidence 9999999997 99999999999999998753 5677777 8 88886 9999998 9999999999
Q ss_pred --CcEEEEECCCCCCCCccccceeeeec-------------ccccEeEEEEee--ecccccCCCCccceEEEEeecCCcc
Q psy4579 204 --HTICLWDINATPKENRVIDAKTIFTG-------------HTAVVEDYSIHR--LILGTHTSDEQNHLLIASVQLPNED 266 (368)
Q Consensus 204 --g~i~iwd~~~~~~~~~~~~~~~~~~~-------------~~~~v~~v~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~ 266 (368)
|.|++||++++ .++..+.+ |...|.+++|++ ..+.+++.|+.+++|
T Consensus 256 ~~g~i~i~d~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw---------- 318 (397)
T 1sq9_A 256 SFGCITLYETEFG-------ERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFW---------- 318 (397)
T ss_dssp TEEEEEEEETTTC-------CEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEE----------
T ss_pred CCceEEEEECCCC-------cccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEE----------
Confidence 99999999886 45667777 999999999985 345555555544444
Q ss_pred cccccccccCCCCCcccccCCCCceeeeee--------------------cCcccceeEEEEeCCCC---------cEEE
Q psy4579 267 AQFDASNYDTDKGDFGGFGSVSGKIEIEIK--------------------INHEGEVNRARYMPQNP---------CVIA 317 (368)
Q Consensus 267 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~--------------------~~h~~~i~~~~~~p~~~---------~~la 317 (368)
+..+++....+. ..|...|.+++|+|++. .+|+
T Consensus 319 ------------------d~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~ 380 (397)
T 1sq9_A 319 ------------------DVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLC 380 (397)
T ss_dssp ------------------ETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEE
T ss_pred ------------------EcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEE
Confidence 233333333332 12489999999999973 4888
Q ss_pred EecCCCeEEEEECCC
Q psy4579 318 TKTPSSDVLVFDYTK 332 (368)
Q Consensus 318 sgs~Dg~i~iwd~~~ 332 (368)
+|+.||.|++||++.
T Consensus 381 s~~~dg~i~iw~~~~ 395 (397)
T 1sq9_A 381 CVCLDRSIRWFREAG 395 (397)
T ss_dssp EEETTTEEEEEEEEC
T ss_pred EecCCCcEEEEEcCC
Confidence 999999999999864
|
| >4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.5e-25 Score=195.31 Aligned_cols=261 Identities=19% Similarity=0.198 Sum_probs=186.4
Q ss_pred ceeeEecCCcccccCCCCccccccCcceeeeccccCC-CCCcEEEEEEecCCCccccccCCcccCCCCcccCCCCCe-ee
Q psy4579 43 SLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSD-EQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDA-QF 120 (368)
Q Consensus 43 ~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~-~~ 120 (368)
..+++|+|++ .||+| .|++|++|+.......+... ......|.++.+.+.+..+..+ +.||.|++|+... +.
T Consensus 28 ~~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sg----s~Dg~v~iw~~~~~~~ 101 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVG----TSSAEVQLWDVQQQKR 101 (318)
T ss_dssp CBCEEECTTS-EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEE----ETTSEEEEEETTTTEE
T ss_pred ceEEEECCCC-EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEE----ECCCcEEEeecCCcee
Confidence 4568999986 67766 57888766544322222222 2333468888887665544332 3689999999874 55
Q ss_pred eeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEe
Q psy4579 121 DASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSA 200 (368)
Q Consensus 121 ~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~ 200 (368)
.....+|...+.++.+. + ..+++|+.++.+++|+...... ....+.+|...+. .+.|+++ +.+|+++
T Consensus 102 ~~~~~~h~~~~~~~~~~--~-~~l~s~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~---~~~~~~~-~~~l~s~ 168 (318)
T 4ggc_A 102 LRNMTSHSARVGSLSWN--S-YILSSGSRSGHIHHHDVRVAEH------HVATLSGHSQEVC---GLRWAPD-GRHLASG 168 (318)
T ss_dssp EEEEECCSSCEEEEEEE--T-TEEEEEETTSEEEEEETTSSSC------EEEEEECCSSCEE---EEEECTT-SSEEEEE
T ss_pred EEEecCccceEEEeecC--C-CEEEEEecCCceEeeecCCCce------eEEEEcCccCceE---EEEEcCC-CCEEEEE
Confidence 66778899888877665 3 7899999999999999887643 4577889999985 9999998 8999999
Q ss_pred eCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeee-----cccccCCCCccceEEEEeecCCccccccccccc
Q psy4579 201 SDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRL-----ILGTHTSDEQNHLLIASVQLPNEDAQFDASNYD 275 (368)
Q Consensus 201 s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~-----~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d 275 (368)
+.||+|++||++++.... ........+...|.++.+.+. .+++++.++.
T Consensus 169 ~~d~~i~iwd~~~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~----------------------- 222 (318)
T 4ggc_A 169 GNDNLVNVWPSAPGEGGW---VPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRH----------------------- 222 (318)
T ss_dssp ETTSCEEEEESSCBTTBS---CCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCE-----------------------
T ss_pred ecCcceeEEECCCCcccc---cceeeecccCCceEEEEecCCCCcEEEEEecCCCCE-----------------------
Confidence 999999999998864322 223445567788888888641 1122222222
Q ss_pred CCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEE-EecCCCeEEEEECCCCCCCCCCCCCCCCceeeecccC
Q psy4579 276 TDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIA-TKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQK 354 (368)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~la-sgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~ 354 (368)
+.+|+.......... .|...+..+.|+|.+..+++ +|+.|+.|++||++. ..++..+.||.+
T Consensus 223 -----i~lwd~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~----------~~~~~~l~gH~~ 285 (318)
T 4ggc_A 223 -----IRIWNVCSGACLSAV--DAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPT----------MAKVAELKGHTS 285 (318)
T ss_dssp -----EEEEETTTCCEEEEE--ECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTT----------CCEEEEECCCSS
T ss_pred -----EEEEecccccccccc--cceeeeeeeeecccccceEEEEEcCCCEEEEEECCC----------CcEEEEEcCCCC
Confidence 333333334433332 57788999999999865553 356899999999975 566778999999
Q ss_pred ceeeecceeee
Q psy4579 355 EGLIEGTYNCY 365 (368)
Q Consensus 355 ~V~~l~w~p~~ 365 (368)
.|++++|+|+.
T Consensus 286 ~V~~l~~spdg 296 (318)
T 4ggc_A 286 RVLSLTMSPDG 296 (318)
T ss_dssp CEEEEEECTTS
T ss_pred CEEEEEEcCCC
Confidence 99999999975
|
| >3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=3.8e-26 Score=204.38 Aligned_cols=266 Identities=9% Similarity=0.030 Sum_probs=184.5
Q ss_pred cccccCceeeEecCC---cccccCCCCccccccCcceeeeccccCC-CCCcEEEEEEecCCCccccccCCcccCCCCccc
Q psy4579 37 HALEWPSLTAQWLPD---VTSVQLPNEDAQFDASNYDTDKGTHTSD-EQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQ 112 (368)
Q Consensus 37 ~~~~~~~~~~~~~p~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~ 112 (368)
..+.-++.+++|+|+ +++|++|+.||.+++|+.+......... ......|.++.|.+.+..+.+. +.||.|+
T Consensus 36 ~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~----~~dg~v~ 111 (368)
T 3mmy_A 36 SSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTA----SCDKTAK 111 (368)
T ss_dssp SCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEE----ETTSEEE
T ss_pred cCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEE----cCCCcEE
Confidence 345678999999999 6999999999999777654311111011 1122347777886654444332 3589999
Q ss_pred CCCCCeeeeeccccCCCCceeeEe--cCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEe
Q psy4579 113 LPNEDAQFDASNYDTDKGGYGLSW--NPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWN 190 (368)
Q Consensus 113 i~~~~~~~~~~~~~h~~~v~~l~~--sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~ 190 (368)
+|+...........|...|++++| +|++ .+|++++.||.|++||++++. +...+..|.... ++.+.
T Consensus 112 iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~l~~~~~dg~i~vwd~~~~~-------~~~~~~~~~~~~----~~~~~ 179 (368)
T 3mmy_A 112 MWDLSSNQAIQIAQHDAPVKTIHWIKAPNY-SCVMTGSWDKTLKFWDTRSSN-------PMMVLQLPERCY----CADVI 179 (368)
T ss_dssp EEETTTTEEEEEEECSSCEEEEEEEECSSC-EEEEEEETTSEEEEECSSCSS-------CSEEEECSSCEE----EEEEE
T ss_pred EEEcCCCCceeeccccCceEEEEEEeCCCC-CEEEEccCCCcEEEEECCCCc-------EEEEEecCCCce----EEEec
Confidence 999987666678889999999999 8888 899999999999999998764 456677665433 66665
Q ss_pred CCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee------ecccccCCCCccceEEEEeecCC
Q psy4579 191 PSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR------LILGTHTSDEQNHLLIASVQLPN 264 (368)
Q Consensus 191 p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~------~~~~~~~~d~~~~~~~~~~~~~~ 264 (368)
...+++++.|+.+++||++...... ......+...+.++.+.+ ..+.+++.++.+++|...
T Consensus 180 ---~~~~~~~~~~~~i~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~----- 246 (368)
T 3mmy_A 180 ---YPMAVVATAERGLIVYQLENQPSEF-----RRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYIN----- 246 (368)
T ss_dssp ---TTEEEEEEGGGCEEEEECSSSCEEE-----EECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESS-----
T ss_pred ---CCeeEEEeCCCcEEEEEeccccchh-----hhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecC-----
Confidence 4578899999999999998763211 111112333444444432 225555555555554332
Q ss_pred cccccccccccCCCCCcccccCCCC---ceeeeee-----------cCcccceeEEEEeCCCCcEEEEecCCCeEEEEEC
Q psy4579 265 EDAQFDASNYDTDKGDFGGFGSVSG---KIEIEIK-----------INHEGEVNRARYMPQNPCVIATKTPSSDVLVFDY 330 (368)
Q Consensus 265 ~~~~~~~~~~d~~~~~~~~~~~~~~---~~~~~~~-----------~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~ 330 (368)
.. .....+. .+|...|++++|+|++ .+|++|+.||.|++||+
T Consensus 247 -----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~-~~l~s~~~dg~i~iwd~ 302 (368)
T 3mmy_A 247 -----------------------PPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVH-GTLATVGSDGRFSFWDK 302 (368)
T ss_dssp -----------------------CSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTT-CCEEEEETTSCEEEEET
T ss_pred -----------------------CCCccccceeeeeeecccccccccccccceEEEEEecCC-CEEEEEccCCeEEEEEC
Confidence 11 1112222 1334489999999999 67889999999999999
Q ss_pred CCCCCCCCCCCCCCCceeeecccCceeeecceeee
Q psy4579 331 TKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p~~ 365 (368)
+. ..++..+.+|...|.+++|+|+.
T Consensus 303 ~~----------~~~~~~~~~~~~~v~~~~~s~~g 327 (368)
T 3mmy_A 303 DA----------RTKLKTSEQLDQPISACCFNHNG 327 (368)
T ss_dssp TT----------TEEEEECCCCSSCEEEEEECTTS
T ss_pred CC----------CcEEEEecCCCCCceEEEECCCC
Confidence 75 44556788999999999999975
|
| >3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.94 E-value=3.1e-26 Score=224.45 Aligned_cols=255 Identities=15% Similarity=0.146 Sum_probs=187.4
Q ss_pred ccccCceeeEecCCcccccCCCCccccccCcceeeeccccCC-CCCcEEEEEEecCCC-ccccccCCcccCCCCcccCCC
Q psy4579 38 ALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSD-EQNHLLIASVQLPNE-DAQFDASNYDTDKGGNVQLPN 115 (368)
Q Consensus 38 ~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~g~i~i~~ 115 (368)
.+.-+|.+++|+|+++++++|+.||.+.+|+.....+..... ......|.++.+.+. +....+++ +.||.|++|+
T Consensus 7 gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~---s~Dg~I~vwd 83 (753)
T 3jro_A 7 AHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASC---SYDGKVLIWK 83 (753)
T ss_dssp -CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEE---ETTSCEEEEE
T ss_pred cCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEE---eCCCeEEEEE
Confidence 356789999999999999999999999777654223333222 222345788888433 23333333 3589999999
Q ss_pred CCee---eeeccccCCCCceeeEecCC--CCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEe
Q psy4579 116 EDAQ---FDASNYDTDKGGYGLSWNPS--LNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWN 190 (368)
Q Consensus 116 ~~~~---~~~~~~~h~~~v~~l~~sp~--~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~ 190 (368)
.... .......|...|++++|+|+ + ..+++|+.||.|++||+.+.... ....+.+|...|. +++|+
T Consensus 84 ~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~-~~l~sgs~dg~I~vwdl~~~~~~-----~~~~~~~~~~~v~---~l~~~ 154 (753)
T 3jro_A 84 EENGRWSQIAVHAVHSASVNSVQWAPHEYG-PLLLVASSDGKVSVVEFKENGTT-----SPIIIDAHAIGVN---SASWA 154 (753)
T ss_dssp EETTEEEEEEEECCCSSCEEEEEECCGGGC-SEEEEEETTSEEEEEECCSSSCC-----CCEEEECCSSCEE---EEEEC
T ss_pred CCCCcccccccccCCCCCeEEEEECCCCCC-CEEEEEeCCCcEEEEEeecCCCc-----ceeEeecCCCceE---EEEec
Confidence 8653 55667789999999999999 7 89999999999999999876432 3456788999996 99999
Q ss_pred CC------------CCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeee-----cccccCCCCcc
Q psy4579 191 PS------------LNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRL-----ILGTHTSDEQN 253 (368)
Q Consensus 191 p~------------~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~-----~~~~~~~d~~~ 253 (368)
|. ++.++++|+.||.|++||++++... ..+...+.+|...|.+++|+|. .+.+++.|+.+
T Consensus 155 p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~---~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I 231 (753)
T 3jro_A 155 PATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQT---YVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTC 231 (753)
T ss_dssp CCC---------CGGGCCEEEEETTSCEEEEEEETTTTE---EEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCE
T ss_pred CcccccccccccCCCCCEEEEEECCCeEEEEeccCCccc---ceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEE
Confidence 94 3889999999999999999876432 1345677889999999999853 56666666666
Q ss_pred ceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCC
Q psy4579 254 HLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
++|...... ... .........|...|.+++|+|++ .+|++|+.||.|++||++.
T Consensus 232 ~iwd~~~~~----~~~--------------------~~~~~~~~~~~~~v~~l~~spdg-~~l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 232 IIWTQDNEQ----GPW--------------------KKTLLKEEKFPDVLWRASWSLSG-NVLALSGGDNKVTLWKENL 285 (753)
T ss_dssp EEEEESSSS----SCC--------------------BCCBSSSSCCSSCCCCEEECTTT-CCEEEECSSSCEECCBCCS
T ss_pred EEecCCCCC----Ccc--------------------eeEEeccCCCCCceEEEEEcCCC-CEEEEEcCCCEEEEEecCC
Confidence 665432100 000 00011112688999999999999 5778999999999999984
|
| >3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.94 E-value=4.1e-27 Score=216.41 Aligned_cols=296 Identities=12% Similarity=0.091 Sum_probs=179.7
Q ss_pred hhhhhhhhhcC---cchheeecccccccCceeeEecCCcccccCCCCccccccCcceee-eccccCCCCCcEEEEEEecC
Q psy4579 17 NEEYKIWKKNT---PFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTD-KGTHTSDEQNHLLIASVQLP 92 (368)
Q Consensus 17 ~~~~~~w~~~~---~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~ 92 (368)
+...++|+... ...+.......+..++.+++|+|+++.|++++.|+.+++|+.+.. .+........ ..+..+.+.
T Consensus 85 dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~-~~i~~~~~~ 163 (437)
T 3gre_A 85 QGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNC-ECIRKINLK 163 (437)
T ss_dssp TSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEE-EEEEEEEGG
T ss_pred CceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeecccc-ceeEEEEcc
Confidence 45677887765 333333333346789999999999999999999999977765422 2211111110 123333332
Q ss_pred C---------------CccccccCCcccCCCCcccCCCCCe-eeeecccc--CCCCceeeEecCCCCCeeEEEeCCCcEE
Q psy4579 93 N---------------EDAQFDASNYDTDKGGNVQLPNEDA-QFDASNYD--TDKGGYGLSWNPSLNGYLLSASDDHTIC 154 (368)
Q Consensus 93 ~---------------~~~~~~~~~~~~~~~g~i~i~~~~~-~~~~~~~~--h~~~v~~l~~sp~~~~~lasg~~dg~v~ 154 (368)
+ .+....+.+ +.||.|++|+... +....+.. |.+.|++++|+|++ .+|++|+.||.|+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~l~~~---~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~-~~l~s~~~dg~i~ 239 (437)
T 3gre_A 164 NFGKNEYAVRMRAFVNEEKSLLVAL---TNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEEC-CVLILGTTRGIID 239 (437)
T ss_dssp GGSSCCCEEEEEEEECSSCEEEEEE---ETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTS-CEEEEEETTSCEE
T ss_pred CcccccCceEEEEEEcCCCCEEEEE---eCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCC-CEEEEEcCCCeEE
Confidence 1 112222222 4589999999864 44555555 89999999999998 9999999999999
Q ss_pred EEeCCCCCCCCcccccceeee-ccccceecceeeEEeCC---CCCeEEEeeCCCcEEEEECCCCCCCCccc---------
Q psy4579 155 LWDINATPKENRVIDAKTIFT-GHTAVVEVRYGLSWNPS---LNGYLLSASDDHTICLWDINATPKENRVI--------- 221 (368)
Q Consensus 155 iwd~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~i~~~p~---~~~~l~s~s~dg~i~iwd~~~~~~~~~~~--------- 221 (368)
+||++++. +...+. .|..+|. +++|+|. ++.+|++|+.||.|++||++++.....+.
T Consensus 240 iwd~~~~~-------~~~~~~~~~~~~v~---~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 309 (437)
T 3gre_A 240 IWDIRFNV-------LIRSWSFGDHAPIT---HVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSME 309 (437)
T ss_dssp EEETTTTE-------EEEEEBCTTCEEEE---EEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGG
T ss_pred EEEcCCcc-------EEEEEecCCCCceE---EEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccc
Confidence 99998753 455554 7777885 9977653 26699999999999999998763211000
Q ss_pred --cce------eeeec--ccccEeEEEEee-ecccccCCCCccceEEEEeec-----CC---cccccccccccCCCCCcc
Q psy4579 222 --DAK------TIFTG--HTAVVEDYSIHR-LILGTHTSDEQNHLLIASVQL-----PN---EDAQFDASNYDTDKGDFG 282 (368)
Q Consensus 222 --~~~------~~~~~--~~~~v~~v~~~~-~~~~~~~~d~~~~~~~~~~~~-----~~---~~~~~~~~~~d~~~~~~~ 282 (368)
.+. ..+.+ |...|.+++|++ ..+.+++.|+.+++|...... .. ....+....+... ..+.
T Consensus 310 ~~~~~~~~l~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 388 (437)
T 3gre_A 310 HFLPIEKGLEELNFCGIRSLNALSTISVSNDKILLTDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTAN-LTML 388 (437)
T ss_dssp GGSCBCSSGGGCCCCCCCSGGGGCCEEEETTEEEEEEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETT-EEEE
T ss_pred eecccccccccceecccccCCceEEEEECCceEEEecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecc-eEEE
Confidence 000 01223 677788888874 467777777777777432100 00 0000000000000 0000
Q ss_pred --cccCCCCceeeeeecCcccceeEEEEeCC-CCcEEEEecCCCeEEEEE
Q psy4579 283 --GFGSVSGKIEIEIKINHEGEVNRARYMPQ-NPCVIATKTPSSDVLVFD 329 (368)
Q Consensus 283 --~~~~~~~~~~~~~~~~h~~~i~~~~~~p~-~~~~lasgs~Dg~i~iwd 329 (368)
.++...+... .....|...|++++|+++ +..+|+||+.||.|+||+
T Consensus 389 ~~~~~~~~~~~~-~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 389 LRKMKRTSTHSV-DDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp EEECC--------------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred EEeccccccccc-CcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 0001111111 111259999999999998 236899999999999995
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=8.7e-26 Score=233.20 Aligned_cols=266 Identities=15% Similarity=0.165 Sum_probs=198.5
Q ss_pred ccccCceeeEecCCcccccCCCCccccccCcceeeeccccCC-CCCcEEEEEEecCCCccccccCCcccCCCCcccCCCC
Q psy4579 38 ALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSD-EQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNE 116 (368)
Q Consensus 38 ~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~ 116 (368)
.+..++.+++|+|+++++++|+.||.+.+|+. ..+..... ......|.++.|.+++..+.++ +.||.|++|+.
T Consensus 613 ~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~--~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~----~~d~~v~vwd~ 686 (1249)
T 3sfz_A 613 PHTDAVYHACFSQDGQRIASCGADKTLQVFKA--ETGEKLLDIKAHEDEVLCCAFSSDDSYIATC----SADKKVKIWDS 686 (1249)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEET--TTCCEEEEECCCSSCEEEEEECTTSSEEEEE----ETTSEEEEEET
T ss_pred cccccEEEEEECCCCCEEEEEeCCCeEEEEEC--CCCCEEEEeccCCCCEEEEEEecCCCEEEEE----eCCCeEEEEEC
Confidence 45678999999999999999999999966654 43433322 1223457788886655444333 35899999998
Q ss_pred Ce-eeeeccccCCCCceeeEecCCC-CCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCC
Q psy4579 117 DA-QFDASNYDTDKGGYGLSWNPSL-NGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLN 194 (368)
Q Consensus 117 ~~-~~~~~~~~h~~~v~~l~~sp~~-~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~ 194 (368)
.. +....+.+|...|.+++|+|++ ..++++|+.||.|++||+.++. ....+.+|.+.|. +++|+|+ +
T Consensus 687 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~-------~~~~~~~h~~~v~---~~~~sp~-~ 755 (1249)
T 3sfz_A 687 ATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKE-------CRNTMFGHTNSVN---HCRFSPD-D 755 (1249)
T ss_dssp TTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSS-------EEEEECCCSSCEE---EEEECSS-T
T ss_pred CCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcc-------hhheecCCCCCEE---EEEEecC-C
Confidence 64 5566777899999999999953 2589999999999999998874 5678889999996 9999998 8
Q ss_pred CeEEEeeCCCcEEEEECCCCCCCCccccceeeeec-------------ccccEeEEEEeeecccccCCCCccceEEEEee
Q psy4579 195 GYLLSASDDHTICLWDINATPKENRVIDAKTIFTG-------------HTAVVEDYSIHRLILGTHTSDEQNHLLIASVQ 261 (368)
Q Consensus 195 ~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~-------------~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~ 261 (368)
.+|++|+.||.|++||++++.. ...+.. +...+.+++|++
T Consensus 756 ~~l~s~s~dg~v~vwd~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-------------------- 808 (1249)
T 3sfz_A 756 ELLASCSADGTLRLWDVRSANE-------RKSINVKRFFLSSEDPPEDVEVIVKCCSWSA-------------------- 808 (1249)
T ss_dssp TEEEEEESSSEEEEEEGGGTEE-------EEEEECCCCC--------CCCCCBCCCCBCT--------------------
T ss_pred CEEEEEECCCeEEEEeCCCCcc-------cceecccccccccCCccccccceEEEEEECC--------------------
Confidence 9999999999999999987632 222211 112344444443
Q ss_pred cCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCC
Q psy4579 262 LPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNG 341 (368)
Q Consensus 262 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~ 341 (368)
++..+.+. ..+.+.+|+..++........+|...|.+++|+|++ .++++|+.||.|++||+..
T Consensus 809 ---dg~~l~~~----~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~-~~l~~~~~dg~v~vwd~~~--------- 871 (1249)
T 3sfz_A 809 ---DGDKIIVA----AKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYD-HLAVIALSQYCVELWNIDS--------- 871 (1249)
T ss_dssp ---TSSEEEEE----ETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSST-TEEEEECSSSCEEEEETTT---------
T ss_pred ---CCCEEEEE----cCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCC-CEEEEEeCCCeEEEEEcCC---------
Confidence 11111111 123455666667777777777899999999999999 6888999999999999975
Q ss_pred CCCCceeeecccCceeeecceeee
Q psy4579 342 ECHPDLRLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 342 ~~~~~~~~~gh~~~V~~l~w~p~~ 365 (368)
...+..+.+|.+.|.+++|+|+.
T Consensus 872 -~~~~~~~~~h~~~v~~v~~spdg 894 (1249)
T 3sfz_A 872 -RLKVADCRGHLSWVHGVMFSPDG 894 (1249)
T ss_dssp -TEEEEEECCCSSCEEEEEECTTS
T ss_pred -CceeeecCCCccceEEEEECCCC
Confidence 44556788999999999999874
|
| >2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A | Back alignment and structure |
|---|
Probab=99.93 E-value=7.2e-25 Score=199.33 Aligned_cols=211 Identities=19% Similarity=0.241 Sum_probs=162.0
Q ss_pred CCCCcccCCCCCee-----eeeccccCCCCceeeEecC-CCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeecccc
Q psy4579 106 DKGGNVQLPNEDAQ-----FDASNYDTDKGGYGLSWNP-SLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTA 179 (368)
Q Consensus 106 ~~~g~i~i~~~~~~-----~~~~~~~h~~~v~~l~~sp-~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~ 179 (368)
+.+|.|++|+.+.. ....+.+|.+.|++++|+| ++ .+|++|+.||+|++||+.++........+...+.+|..
T Consensus 54 ~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~-~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~ 132 (402)
T 2aq5_A 54 SGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHND-NVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTK 132 (402)
T ss_dssp SSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCT-TEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSS
T ss_pred cCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCC-CEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCC
Confidence 46899999997542 2334668999999999999 76 99999999999999999886432222236788999999
Q ss_pred ceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeee--ecccccEeEEEEee--ecccccCCCCccce
Q psy4579 180 VVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIF--TGHTAVVEDYSIHR--LILGTHTSDEQNHL 255 (368)
Q Consensus 180 ~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~--~~~~~~v~~v~~~~--~~~~~~~~d~~~~~ 255 (368)
.|. +++|+|++..+|++|+.||.|++||++++ .+...+ .+|...|.+++|++ ..+.+++.|
T Consensus 133 ~v~---~~~~~p~~~~~l~s~~~dg~i~iwd~~~~-------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----- 197 (402)
T 2aq5_A 133 RVG---IVAWHPTAQNVLLSAGCDNVILVWDVGTG-------AAVLTLGPDVHPDTIYSVDWSRDGALICTSCRD----- 197 (402)
T ss_dssp CEE---EEEECSSBTTEEEEEETTSCEEEEETTTT-------EEEEEECTTTCCSCEEEEEECTTSSCEEEEETT-----
T ss_pred eEE---EEEECcCCCCEEEEEcCCCEEEEEECCCC-------CccEEEecCCCCCceEEEEECCCCCEEEEEecC-----
Confidence 996 99999984479999999999999999987 456667 77999999999985 233333333
Q ss_pred EEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccc-eeEEEEeCCCCcEEEEe---cCCCeEEEEECC
Q psy4579 256 LIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGE-VNRARYMPQNPCVIATK---TPSSDVLVFDYT 331 (368)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~-i~~~~~~p~~~~~lasg---s~Dg~i~iwd~~ 331 (368)
+.+.+|+..+++....+..+|.+. +.+++|+|++ .+|++| +.|+.|++||++
T Consensus 198 -----------------------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~g~~~~~d~~i~iwd~~ 253 (402)
T 2aq5_A 198 -----------------------KRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEG-KILTTGFSRMSERQVALWDTK 253 (402)
T ss_dssp -----------------------SEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTT-EEEEEEECTTCCEEEEEEETT
T ss_pred -----------------------CcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCC-cEEEEeccCCCCceEEEEcCc
Confidence 334455555666666663478776 8999999998 788898 899999999998
Q ss_pred CCCCCCCCCCCCCCceee-ecccCceeeecceeee
Q psy4579 332 KHPSKPDPNGECHPDLRL-RGHQKEGLIEGTYNCY 365 (368)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~-~gh~~~V~~l~w~p~~ 365 (368)
... .++... ..|...|.+++|+|..
T Consensus 254 ~~~---------~~~~~~~~~~~~~v~~~~~s~~~ 279 (402)
T 2aq5_A 254 HLE---------EPLSLQELDTSSGVLLPFFDPDT 279 (402)
T ss_dssp BCS---------SCSEEEECCCCSSCEEEEEETTT
T ss_pred ccc---------CCceEEeccCCCceeEEEEcCCC
Confidence 521 122222 3678889999999873
|
| >2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A | Back alignment and structure |
|---|
Probab=99.93 E-value=2e-25 Score=192.93 Aligned_cols=251 Identities=10% Similarity=0.125 Sum_probs=156.1
Q ss_pred hhhhhhcCcchheeecc-cccccCceeeEecC----------------CcccccCCCCccccccCcceeeeccccCCCCC
Q psy4579 20 YKIWKKNTPFLYDLVMT-HALEWPSLTAQWLP----------------DVTSVQLPNEDAQFDASNYDTDKGTHTSDEQN 82 (368)
Q Consensus 20 ~~~w~~~~~~~~~~~~~-~~~~~~~~~~~~~p----------------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (368)
.+.|+.....-...+++ +-++-||+.+.+.| ..+.|+++.+|+.+ ..+....| +
T Consensus 65 v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~spd~~~~--~~~l~s~g-------~ 135 (356)
T 2w18_A 65 VSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSSDDESE--KQVLLKSG-------N 135 (356)
T ss_dssp EEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC------C--CEEEEEEE-------E
T ss_pred EEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEECCCcccc--ccEEEeCC-------C
Confidence 45677777633333333 33456899999999 45556666555443 22222211 1
Q ss_pred cEEEEEEecCCCccccccCCcccCCCCcccCCCCC--eeeeeccccCCCCceeeEecC---CCCCeeEEEeCCCcEEEEe
Q psy4579 83 HLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNED--AQFDASNYDTDKGGYGLSWNP---SLNGYLLSASDDHTICLWD 157 (368)
Q Consensus 83 ~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~--~~~~~~~~~h~~~v~~l~~sp---~~~~~lasg~~dg~v~iwd 157 (368)
...+.. ++ ....+..+. ...|+.|++|+.. ++....+..|...++.++|+| ++ ..||+|+.|++|+|||
T Consensus 136 ~~~v~~--l~-~g~lv~ss~--~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~-~~LaSgS~D~TIkIWD 209 (356)
T 2w18_A 136 IKAVLG--LT-KRRLVSSSG--TLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQ-EALLGTTIMNNIVIWN 209 (356)
T ss_dssp EEEEEE--ET-TTEEEEEES--SSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETST-TEEEEEETTSEEEEEE
T ss_pred eEEEEe--cC-CCcEEEecc--cCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCC-ceEEEecCCCcEEEEE
Confidence 122333 23 222222211 1258999999873 577778889999999999999 66 8999999999999999
Q ss_pred CCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeE------------EEeeCCCcEEEEECCCCCCCCcccccee
Q psy4579 158 INATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYL------------LSASDDHTICLWDINATPKENRVIDAKT 225 (368)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l------------~s~s~dg~i~iwd~~~~~~~~~~~~~~~ 225 (368)
+++++ .++++.+|...+..+.+++|+|+ +.++ ++|+.|++|++||..++. .+.
T Consensus 210 l~TGk-------~l~tL~g~~~~v~~v~~vafSpd-G~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk-------~l~ 274 (356)
T 2w18_A 210 LKTGQ-------LLKKMHIDDSYQASVCHKAYSEM-GLLFIVLSHPCAKESESLRSPVFQLIVINPKTTL-------SVG 274 (356)
T ss_dssp TTTCC-------EEEEEECCC---CCCEEEEEEET-TEEEEEEC------------CCEEEEEEETTTTE-------EEE
T ss_pred CCCCc-------EEEEEcCCCcceeeeEEEEECCC-CCEEEEeccCCCcceeeccCCCcEEEEEECCCCE-------EEE
Confidence 99885 56778776543321237789998 7665 678899999999998872 222
Q ss_pred ee-----ecccccEeEEEEeeecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcc
Q psy4579 226 IF-----TGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHE 300 (368)
Q Consensus 226 ~~-----~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~ 300 (368)
.+ .+|...+.+..++..++++++.|+ .+.+||+.+++...++. +|.
T Consensus 275 v~~~~~p~Gh~~~~lsg~~sg~~lASgS~Dg----------------------------TIkIWDl~tGk~l~tL~-gH~ 325 (356)
T 2w18_A 275 VMLYCLPPGQAGRFLEGDVKDHCAAAILTSG----------------------------TIAIWDLLLGQCTALLP-PVS 325 (356)
T ss_dssp EEEECCCTTCCCCEEEEEEETTEEEEEETTS----------------------------CEEEEETTTCSEEEEEC-CC-
T ss_pred EEEeeccCCCcceeEccccCCCEEEEEcCCC----------------------------cEEEEECCCCcEEEEec-CCC
Confidence 22 245444433333333333433333 35556666788777776 787
Q ss_pred ccee-EEEEeCCCCcEEEEecCCCeEEEEEC
Q psy4579 301 GEVN-RARYMPQNPCVIATKTPSSDVLVFDY 330 (368)
Q Consensus 301 ~~i~-~~~~~p~~~~~lasgs~Dg~i~iwd~ 330 (368)
..+. +++|+|++ .+|+||+.|++|+|||+
T Consensus 326 ~~vvs~vafSPDG-~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 326 DQHWSFVKWSGTD-SHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp -CCCCEEEECSSS-SEEEEECTTSCEEEEEE
T ss_pred CCeEEEEEECCCC-CEEEEEECCCcEEEecC
Confidence 7655 68999999 68889999999999996
|
| >2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.7e-25 Score=206.53 Aligned_cols=229 Identities=13% Similarity=0.101 Sum_probs=161.4
Q ss_pred EEEEEecCCCccccccCCcccCCCCcccCCCCC--e-eeeeccc--cCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCC
Q psy4579 85 LIASVQLPNEDAQFDASNYDTDKGGNVQLPNED--A-QFDASNY--DTDKGGYGLSWNPSLNGYLLSASDDHTICLWDIN 159 (368)
Q Consensus 85 ~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~--~-~~~~~~~--~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~ 159 (368)
.|.++.|.+.+..+.+.+ +.||.|++|+.. . .....+. .|...|++++|+|++ .+|++|+.||.|++|++.
T Consensus 104 ~v~~~~~s~d~~~l~~~~---~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~-~~l~~~~~~g~v~~~~~~ 179 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACA---DSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDD-TTVIIADKFGDVYSIDIN 179 (450)
T ss_dssp CEEEEEECTTSSEEEEEE---GGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTS-SEEEEEETTSEEEEEETT
T ss_pred ceEEEEEcCCCCEEEEEE---CCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCC-CEEEEEeCCCcEEEEecC
Confidence 377888866655543333 358999999987 3 3333332 678899999999999 999999999999999998
Q ss_pred CCCCCCcccccceeeeccccceecceeeEEeCC--CCCeEEEeeCCCcEEEEECCCCCCCCccccceee-eecccccEeE
Q psy4579 160 ATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPS--LNGYLLSASDDHTICLWDINATPKENRVIDAKTI-FTGHTAVVED 236 (368)
Q Consensus 160 ~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~--~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~v~~ 236 (368)
+...... +...+.+|...|. +++|+|+ .+.+|++|+.|+.|++||++++. .+.. +.+|...|.+
T Consensus 180 ~~~~~~~---~~~~~~~h~~~v~---~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~-------~~~~~~~~h~~~v~~ 246 (450)
T 2vdu_B 180 SIPEEKF---TQEPILGHVSMLT---DVHLIKDSDGHQFIITSDRDEHIKISHYPQCF-------IVDKWLFGHKHFVSS 246 (450)
T ss_dssp SCCCSSC---CCCCSEECSSCEE---EEEEEECTTSCEEEEEEETTSCEEEEEESCTT-------CEEEECCCCSSCEEE
T ss_pred Ccccccc---cceeeecccCceE---EEEEcCCCCCCcEEEEEcCCCcEEEEECCCCc-------eeeeeecCCCCceEE
Confidence 7643210 2346788999996 9999996 25689999999999999998763 3444 5589999999
Q ss_pred EEEe-eecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeee-------------------
Q psy4579 237 YSIH-RLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIK------------------- 296 (368)
Q Consensus 237 v~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~------------------- 296 (368)
++|+ ...+.+++.|+.+++|.. .+++....+.
T Consensus 247 ~~~sd~~~l~s~~~d~~v~vwd~----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (450)
T 2vdu_B 247 ICCGKDYLLLSAGGDDKIFAWDW----------------------------KTGKNLSTFDYNSLIKPYLNDQHLAPPRF 298 (450)
T ss_dssp EEECSTTEEEEEESSSEEEEEET----------------------------TTCCEEEEEECHHHHGGGCCTTSBC----
T ss_pred EEECCCCEEEEEeCCCeEEEEEC----------------------------CCCcEeeeecchhhhhhhhhhcccccccc
Confidence 9996 445566666666555532 1222211111
Q ss_pred -----cCcccceeEEEEeCCCCcEEEEec-CCCeEEEEECCCCCCCCCCCCCCCCceeeecccCceeeecceeee
Q psy4579 297 -----INHEGEVNRARYMPQNPCVIATKT-PSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 297 -----~~h~~~i~~~~~~p~~~~~lasgs-~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p~~ 365 (368)
..+...|.+++|+|++. +|++++ .|+.|++|++... ..+....+..+.+| +.|.+++|+|..
T Consensus 299 ~~~~~~~~~~~v~~i~~~~~~~-~l~~~~~~d~~i~iw~~~~~-----~~~~l~~~~~~~~~-~~v~~~~~~~~~ 366 (450)
T 2vdu_B 299 QNENNDIIEFAVSKIIKSKNLP-FVAFFVEATKCIIILEMSEK-----QKGDLALKQIITFP-YNVISLSAHNDE 366 (450)
T ss_dssp ------CBCCCEEEEEECSSSS-EEEEEETTCSEEEEEEECSS-----STTCEEEEEEEECS-SCEEEEEEETTE
T ss_pred cccccccceEEEEEEEEeCCCC-EEEEEECCCCeEEEEEeccC-----CCCceeeccEeccC-CceEEEEecCCc
Confidence 02346799999999995 555655 8999999999210 00112444566777 889999999853
|
| >2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.93 E-value=7.1e-25 Score=201.27 Aligned_cols=267 Identities=9% Similarity=0.027 Sum_probs=178.4
Q ss_pred cccCceeeEecCCcccccCCCCccccccCcceeeeccccCCCCCcEEEEEEecCCCccccccCCcccCCCCcccCCCCCe
Q psy4579 39 LEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDA 118 (368)
Q Consensus 39 ~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~ 118 (368)
++--+.+++|+|+| .++.+.+|. ..+......+....|..+.|++++..+.++. .||.|++|+.++
T Consensus 51 h~~~v~~V~FsPdg-------~~~~~~~~~---~~~~~~~~~~~~~~V~~vawSPdG~~LAs~s----~dg~V~iwd~~~ 116 (588)
T 2j04_A 51 NSKNLFHVKEFPLE-------FENKLDFEL---AQQNGLLNSQPVCYPRVCKPSPIDDWMAVLS----NNGNVSVFKDNK 116 (588)
T ss_dssp BGGGTEEEEEECCC-------CCCTTTTSC---CCSSCSSTTSCSCCEEEEEECSSSSCEEEEE----TTSCEEEEETTE
T ss_pred CCccEEEEEECCCC-------CcceEEEEe---CCCceEeecCCCCcEEEEEECCCCCEEEEEe----CCCcEEEEeCCc
Confidence 44568899999999 344443333 2333333323356788999987766555443 689999999766
Q ss_pred eeeeccccCCC-----CceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceee----eccccceecceeeEE
Q psy4579 119 QFDASNYDTDK-----GGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIF----TGHTAVVEVRYGLSW 189 (368)
Q Consensus 119 ~~~~~~~~h~~-----~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~----~~h~~~v~~~~~i~~ 189 (368)
....+. |.. .|.+++|||+| ++||+|+.||+|+|||+.++......+....++ .+|.+.|. +++|
T Consensus 117 -~l~~l~-~~~~~~~~sv~svafSPDG-~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~---sVaw 190 (588)
T 2j04_A 117 -MLTNLD-SKGNLSSRTYHCFEWNPIE-SSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVT---HIVW 190 (588)
T ss_dssp -EEEECC-CSSCSTTTCEEEEEECSSS-SCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEE---EEEE
T ss_pred -eeeecc-CCCccccccEEEEEEcCCC-CEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEE---EEEE
Confidence 333334 554 59999999999 999999999999999998764211100123555 67778884 9999
Q ss_pred eCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeee-ecccccEeEEEEeeecccccCCCCccceEEEEeecCCcccc
Q psy4579 190 NPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIF-TGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQ 268 (368)
Q Consensus 190 ~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 268 (368)
+|+ + +++++.|++|++||+.++... .....+ .+|...|.+++|+...+++++ ++.
T Consensus 191 SPd-g--Laass~D~tVrlWd~~~~~~~----~~~~tL~~~h~~~V~svaFsg~~LASa~-~~t---------------- 246 (588)
T 2j04_A 191 YED-V--LVAALSNNSVFSMTVSASSHQ----PVSRMIQNASRRKITDLKIVDYKVVLTC-PGY---------------- 246 (588)
T ss_dssp ETT-E--EEEEETTCCEEEECCCSSSSC----CCEEEEECCCSSCCCCEEEETTEEEEEC-SSE----------------
T ss_pred cCC-c--EEEEeCCCeEEEEECCCCccc----cceeeecccccCcEEEEEEECCEEEEEe-CCe----------------
Confidence 998 6 888999999999999776310 123445 378889999999733333332 233
Q ss_pred cccccccCCCCCcccccCCCCceeeeeecCcccceeEEEE--eCCCCcEEEEecCCCeEEEEECCCCCCCCCC-------
Q psy4579 269 FDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARY--MPQNPCVIATKTPSSDVLVFDYTKHPSKPDP------- 339 (368)
Q Consensus 269 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~--~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~------- 339 (368)
+.+|+...+...... .+|.+.|..++| +|++ ..|+++++||+ ++|......-.+..
T Consensus 247 ------------IkLWd~~~~~~~~~~-~gh~~~V~~va~~~s~d~-~~La~a~edG~-klw~~d~~~~spd~~l~a~~d 311 (588)
T 2j04_A 247 ------------VHKIDLKNYSISSLK-TGSLENFHIIPLNHEKES-TILLMSNKTSY-KVLLEDELHVTADNIIAPYLE 311 (588)
T ss_dssp ------------EEEEETTTTEEEEEE-CSCCSCCCEEEETTCSSC-EEEEECSSCEE-EEEESSSEEEECCCSSHHHHH
T ss_pred ------------EEEEECCCCeEEEEE-cCCCceEEEEEeeeCCCC-CEEEEEcCCCC-EEEeeccEEECCCceEEEEcC
Confidence 333444444443333 389999999999 9999 78889999999 99998532111100
Q ss_pred ------CCCCCCceeeecccCceeeecceeee
Q psy4579 340 ------NGECHPDLRLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 340 ------~~~~~~~~~~~gh~~~V~~l~w~p~~ 365 (368)
.....+...+. +...|++++|||+.
T Consensus 312 ~~v~lW~~~g~~l~~~~-~~~~I~~va~SPdG 342 (588)
T 2j04_A 312 KKFKKWSTIWNEFNNYE-TTLVIHGISLSPDG 342 (588)
T ss_dssp HHHHHTTTTTTSSSSSC-CEEEEEEEEECTTS
T ss_pred CEEEEEECCCCceeeec-cceEEEEEEECCCC
Confidence 01112222333 36679999999985
|
| >3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.93 E-value=7.5e-25 Score=196.86 Aligned_cols=232 Identities=13% Similarity=0.121 Sum_probs=168.4
Q ss_pred EEEEEEecCCCccccccCCcccCCCCcccCCCCC---eeeeeccccCCCCceeeEecCC--CCCeeEEEeCCCcEEEEeC
Q psy4579 84 LLIASVQLPNEDAQFDASNYDTDKGGNVQLPNED---AQFDASNYDTDKGGYGLSWNPS--LNGYLLSASDDHTICLWDI 158 (368)
Q Consensus 84 ~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~---~~~~~~~~~h~~~v~~l~~sp~--~~~~lasg~~dg~v~iwd~ 158 (368)
..|.++.+.+....+..+ +.||.|++|+.. .+....+.+|.+.|++++|+|+ + .+|++|+.||.|++||+
T Consensus 12 ~~v~~~~~s~~~~~l~~~----~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-~~l~s~~~dg~v~iwd~ 86 (379)
T 3jrp_A 12 ELIHDAVLDYYGKRLATC----SSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFG-TILASCSYDGKVLIWKE 86 (379)
T ss_dssp CCEEEEEECSSSSEEEEE----ETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGC-SEEEEEETTSCEEEEEE
T ss_pred ccEEEEEEcCCCCEEEEE----ECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCC-CEEEEeccCCEEEEEEc
Confidence 347777786555444333 358999999985 3455667789999999999977 7 89999999999999999
Q ss_pred CCCCCCCcccccceeeeccccceecceeeEEeCCC-CCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEE
Q psy4579 159 NATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSL-NGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDY 237 (368)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~-~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v 237 (368)
.++.. .....+.+|...+. +++|+|+. +.+|++++.||.|++||++.... .....+.+|...|.++
T Consensus 87 ~~~~~-----~~~~~~~~~~~~v~---~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~-----~~~~~~~~~~~~v~~~ 153 (379)
T 3jrp_A 87 ENGRW-----SQIAVHAVHSASVN---SVQWAPHEYGPLLLVASSDGKVSVVEFKENGT-----TSPIIIDAHAIGVNSA 153 (379)
T ss_dssp ETTEE-----EEEEEECCCSSCEE---EEEECCGGGCSEEEEEETTSEEEEEECCTTSC-----CCEEEEECCTTCEEEE
T ss_pred CCCce-----eEeeeecCCCcceE---EEEeCCCCCCCEEEEecCCCcEEEEecCCCCc-----eeeEEecCCCCceEEE
Confidence 87631 14567788999996 99999974 67999999999999999987643 2234567899999999
Q ss_pred EEeee---------------cccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCce---eeeeecCc
Q psy4579 238 SIHRL---------------ILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKI---EIEIKINH 299 (368)
Q Consensus 238 ~~~~~---------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~---~~~~~~~h 299 (368)
+|+|. .+.+++.++.+++ |+..++.. ......+|
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i----------------------------~d~~~~~~~~~~~~~~~~h 205 (379)
T 3jrp_A 154 SWAPATIEEDGEHNGTKESRKFVTGGADNLVKI----------------------------WKYNSDAQTYVLESTLEGH 205 (379)
T ss_dssp EECCCC----------CTTCEEEEEETTSCEEE----------------------------EEEETTTTEEEEEEEECCC
T ss_pred EEcCccccccccccCCCCCCEEEEEeCCCeEEE----------------------------EEecCCCcceeeEEEEecc
Confidence 99872 3333333333333 33333321 12222379
Q ss_pred ccceeEEEEeCCC--CcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeecccCceeeecceeeee
Q psy4579 300 EGEVNRARYMPQN--PCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYNCYL 366 (368)
Q Consensus 300 ~~~i~~~~~~p~~--~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p~~~ 366 (368)
...|.+++|+|++ ..+|++++.||.|++||++..... .........+|...|++++|+|+..
T Consensus 206 ~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~-----~~~~~~~~~~~~~~v~~~~~s~~g~ 269 (379)
T 3jrp_A 206 SDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGP-----WKKTLLKEEKFPDVLWRASWSLSGN 269 (379)
T ss_dssp SSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSC-----CEEEESSSSCCSSCEEEEEECSSSC
T ss_pred cCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCcc-----ceeeeeccccCCCcEEEEEEcCCCC
Confidence 9999999999993 378999999999999999852100 0111222345899999999999753
|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* | Back alignment and structure |
|---|
Probab=99.93 E-value=3.3e-24 Score=198.57 Aligned_cols=279 Identities=13% Similarity=0.122 Sum_probs=191.6
Q ss_pred hhhhhhcCcchhe-eecccccccCceeeEecCCcccccCCCCccccccCcceeeeccccCC-CCCcEEEEEEecCCCccc
Q psy4579 20 YKIWKKNTPFLYD-LVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSD-EQNHLLIASVQLPNEDAQ 97 (368)
Q Consensus 20 ~~~w~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~ 97 (368)
.++|+........ .+..| ....+.++++ +++++++|+.||.+++|+. ..+..... ......|.++.+.+.+ .
T Consensus 102 ~~~w~~~~~~~~~~~l~~h-~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~--~~~~~~~~~~~h~~~V~~l~~~~~~-~ 175 (464)
T 3v7d_B 102 LKNWYNPKFVPQRTTLRGH-MTSVITCLQF--EDNYVITGADDKMIRVYDS--INKKFLLQLSGHDGGVWALKYAHGG-I 175 (464)
T ss_dssp HHHHHCTTCCCEEEEEECC-SSSCEEEEEE--ETTEEEEEETTSCEEEEET--TTTEEEEEECCCSSCEEEEEECSTT-E
T ss_pred HhhhcCCCcCcceEEEcCC-CCCcEEEEEE--CCCEEEEEcCCCcEEEEEC--CCCcEEEEEeCCCcCEEEEEEcCCC-E
Confidence 3567665443222 22222 2222455565 5679999999999976654 33333322 1223457777776544 2
Q ss_pred cccCCcccCCCCcccCCCCCe-eeeeccccCCCCceeeEecC--CCCCeeEEEeCCCcEEEEeCCCCCCCCccc------
Q psy4579 98 FDASNYDTDKGGNVQLPNEDA-QFDASNYDTDKGGYGLSWNP--SLNGYLLSASDDHTICLWDINATPKENRVI------ 168 (368)
Q Consensus 98 ~~~~~~~~~~~g~i~i~~~~~-~~~~~~~~h~~~v~~l~~sp--~~~~~lasg~~dg~v~iwd~~~~~~~~~~~------ 168 (368)
.+++ +.||+|++|+.+. +....+.+|...|.+++|++ ++ .++++|+.||+|++||+.+........
T Consensus 176 -l~s~---s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~-~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~ 250 (464)
T 3v7d_B 176 -LVSG---STDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNI-KYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYP 250 (464)
T ss_dssp -EEEE---ETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSC-EEEEEEETTSCEEEEECCCCCCC------CCSS
T ss_pred -EEEE---eCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCC-CEEEEEcCCCcEEEeeCCCCcccccccccCCcc
Confidence 2222 4599999999864 55666778999999999994 65 899999999999999998764321100
Q ss_pred ----------ccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEE
Q psy4579 169 ----------DAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYS 238 (368)
Q Consensus 169 ----------~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~ 238 (368)
.....+.+|...+. ++ +++ +.++++|+.||.|++||++++ .++..+.+|...|.+++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~v~---~~--~~~-~~~l~~~~~d~~i~vwd~~~~-------~~~~~~~~~~~~v~~~~ 317 (464)
T 3v7d_B 251 LVFHTPEENPYFVGVLRGHMASVR---TV--SGH-GNIVVSGSYDNTLIVWDVAQM-------KCLYILSGHTDRIYSTI 317 (464)
T ss_dssp EEESCGGGCTTEEEEECCCSSCEE---EE--EEE-TTEEEEEETTSCEEEEETTTT-------EEEEEECCCSSCEEEEE
T ss_pred eEeeccCCCeEEEEEccCccceEE---EE--cCC-CCEEEEEeCCCeEEEEECCCC-------cEEEEecCCCCCEEEEE
Confidence 01456778888774 55 566 889999999999999999886 55778889999999999
Q ss_pred Eeee--cccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEE
Q psy4579 239 IHRL--ILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVI 316 (368)
Q Consensus 239 ~~~~--~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~l 316 (368)
|++. .+.+++.|+ .+.+|+..+++....+. +|...|.+++|++ .+|
T Consensus 318 ~~~~~~~l~sg~~dg----------------------------~i~vwd~~~~~~~~~~~-~h~~~v~~~~~~~---~~l 365 (464)
T 3v7d_B 318 YDHERKRCISASMDT----------------------------TIRIWDLENGELMYTLQ-GHTALVGLLRLSD---KFL 365 (464)
T ss_dssp EETTTTEEEEEETTS----------------------------CEEEEETTTTEEEEEEC-CCSSCEEEEEECS---SEE
T ss_pred EcCCCCEEEEEeCCC----------------------------cEEEEECCCCcEEEEEe-CCCCcEEEEEEcC---CEE
Confidence 9862 333333333 34445555666666665 8999999999983 578
Q ss_pred EEecCCCeEEEEECCCCCCCCCCCCCCCCceeeecccCceeeecceeee
Q psy4579 317 ATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 317 asgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p~~ 365 (368)
++|+.||+|++||++. .... ....|...+..++|+|..
T Consensus 366 ~s~s~dg~v~vwd~~~----------~~~~-~~~~~~~~~~~~~~~~~~ 403 (464)
T 3v7d_B 366 VSAAADGSIRGWDAND----------YSRK-FSYHHTNLSAITTFYVSD 403 (464)
T ss_dssp EEEETTSEEEEEETTT----------CCEE-EEEECTTCCCEEEEEECS
T ss_pred EEEeCCCcEEEEECCC----------Ccee-eeecCCCCccEEEEEeCC
Confidence 8999999999999975 1221 222466677778888764
|
| >3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A | Back alignment and structure |
|---|
Probab=99.93 E-value=9.9e-25 Score=193.33 Aligned_cols=236 Identities=14% Similarity=0.080 Sum_probs=161.8
Q ss_pred ccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCC-CCCeEEEee
Q psy4579 123 SNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPS-LNGYLLSAS 201 (368)
Q Consensus 123 ~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~-~~~~l~s~s 201 (368)
.+.+|.+.|++++|+|++ .+||+|+.||.|++||+.+.... ......+.+|...|. +++|+|. ++.+|++|+
T Consensus 6 ~~~gH~~~v~~~~~~~~~-~~l~~~~~dg~i~iw~~~~~~~~---~~~~~~~~~~~~~v~---~~~~~~~~d~~~l~s~~ 78 (351)
T 3f3f_A 6 FDSGHDDLVHDVVYDFYG-RHVATCSSDQHIKVFKLDKDTSN---WELSDSWRAHDSSIV---AIDWASPEYGRIIASAS 78 (351)
T ss_dssp EECCCSSCEEEEEECSSS-SEEEEEETTSEEEEEEECSSSCC---EEEEEEEECCSSCEE---EEEECCGGGCSEEEEEE
T ss_pred cCcccccceeEEEEcCCC-CEEEEeeCCCeEEEEECCCCCCc---ceecceeccCCCcEE---EEEEcCCCCCCEEEEEc
Confidence 346799999999999998 89999999999999999865322 124567789999996 9999993 289999999
Q ss_pred CCCcEEEEECCCCCCCC--ccccceeeeecccccEeEEEEeee----cccccCCCCccceEEEEeecCC-----------
Q psy4579 202 DDHTICLWDINATPKEN--RVIDAKTIFTGHTAVVEDYSIHRL----ILGTHTSDEQNHLLIASVQLPN----------- 264 (368)
Q Consensus 202 ~dg~i~iwd~~~~~~~~--~~~~~~~~~~~~~~~v~~v~~~~~----~~~~~~~d~~~~~~~~~~~~~~----------- 264 (368)
.||.|++||++.+.... +.+.+...+.+|...|.+++|++. .+.+++.|+.+++|........
T Consensus 79 ~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~ 158 (351)
T 3f3f_A 79 YDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKV 158 (351)
T ss_dssp TTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEES
T ss_pred CCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccc
Confidence 99999999998764321 112346677889999999999864 6778888888888754311100
Q ss_pred -------cccccccccccC------------CCCCcccccCCCCcee-eeeecCcccceeEEEEeCCCC---cEEEEecC
Q psy4579 265 -------EDAQFDASNYDT------------DKGDFGGFGSVSGKIE-IEIKINHEGEVNRARYMPQNP---CVIATKTP 321 (368)
Q Consensus 265 -------~~~~~~~~~~d~------------~~~~~~~~~~~~~~~~-~~~~~~h~~~i~~~~~~p~~~---~~lasgs~ 321 (368)
.........+.. ..+.+..++...+... .....+|...|.+++|+|++. .+|++|+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~ 238 (351)
T 3f3f_A 159 LSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCK 238 (351)
T ss_dssp CSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEET
T ss_pred cccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcC
Confidence 000000000100 1112222333333331 222337999999999999973 58889999
Q ss_pred CCeEEEEECCCCCCCCCC------------------------------------CCCCCCceeeecccCceeeecceeee
Q psy4579 322 SSDVLVFDYTKHPSKPDP------------------------------------NGECHPDLRLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 322 Dg~i~iwd~~~~~~~~~~------------------------------------~~~~~~~~~~~gh~~~V~~l~w~p~~ 365 (368)
||.|++||++........ .....++..+.+|.+.|++++|+|+.
T Consensus 239 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~ 318 (351)
T 3f3f_A 239 DGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTG 318 (351)
T ss_dssp TSCEEEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSS
T ss_pred CCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCC
Confidence 999999999853211000 00113445567899999999999975
|
| >4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A | Back alignment and structure |
|---|
Probab=99.93 E-value=6.7e-26 Score=205.57 Aligned_cols=229 Identities=8% Similarity=-0.061 Sum_probs=146.1
Q ss_pred CCCCcccCCCCCee------eeeccccCCCCceeeEecC--------CCCCeeEEEeCCCcEEEEeCCCCCCCCcccccc
Q psy4579 106 DKGGNVQLPNEDAQ------FDASNYDTDKGGYGLSWNP--------SLNGYLLSASDDHTICLWDINATPKENRVIDAK 171 (368)
Q Consensus 106 ~~~g~i~i~~~~~~------~~~~~~~h~~~v~~l~~sp--------~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~ 171 (368)
+.|++|++|+.+.. ....+.+|.+.|++++|+| ++ ++||+|+.|++|+|||++++. +.
T Consensus 108 ~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~-~~las~s~D~tv~~Wd~~~~~-------~~ 179 (393)
T 4gq1_A 108 CQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAE-QVIASVGDDCTLIIWRLTDEG-------PI 179 (393)
T ss_dssp ETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEE-EEEEEEETTSEEEEEEEETTE-------EE
T ss_pred eCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCC-CEEEEEECCCeEEEEECCCCc-------ee
Confidence 46999999997642 2345678999999999998 66 899999999999999998763 45
Q ss_pred eeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccc------------------cceeeeeccccc
Q psy4579 172 TIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVI------------------DAKTIFTGHTAV 233 (368)
Q Consensus 172 ~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~------------------~~~~~~~~~~~~ 233 (368)
..+.+|..++. +++|+|++..+|++|+.||+|++||++++....... .......+|...
T Consensus 180 ~~~~~~~~~v~---~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 256 (393)
T 4gq1_A 180 LAGYPLSSPGI---SVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASS 256 (393)
T ss_dssp EEEEECSSCEE---EEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSS
T ss_pred eeecCCCCCcE---EEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeeccccccc
Confidence 66778888885 999999855689999999999999998864322110 001123457777
Q ss_pred EeEEEEee---ecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeC
Q psy4579 234 VEDYSIHR---LILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMP 310 (368)
Q Consensus 234 v~~v~~~~---~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p 310 (368)
+.++.|.+ ..+.+++.|+.+++|..... .....+..... .+.... -.........+...+. +.|+|
T Consensus 257 v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~--~~~~~l~~~~~-----~~~~~~---~~~~~~~~~~~~~~~~-~~~~~ 325 (393)
T 4gq1_A 257 LANVRWIGSDGSGILAMCKSGAWLRWNLFAN--NDYNEISDSTM-----KLGPKN---LLPNVQGISLFPSLLG-ACPHP 325 (393)
T ss_dssp CSEEEEETTTTCEEEEECTTSEEEEEEC--------------------------C---CSCSEEEECSSCCSSC-CEECS
T ss_pred ceeeeeecCCCCEEEEEeCCCCEEEEECccC--CCCceEeeecC-----ccccEE---EccccccccccCccee-EEEcc
Confidence 88888762 45566666666666643221 11111110000 000000 0000111112333333 44444
Q ss_pred -CCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeecccCceeeecceeeee
Q psy4579 311 -QNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYNCYL 366 (368)
Q Consensus 311 -~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p~~~ 366 (368)
.+..++++|+.||+|++||+.. ..+...+.+|..+|.+++|||...
T Consensus 326 ~~~~~~~~sgs~Dg~V~lwd~~~----------~~~~~~~~~~~~~V~svafspdG~ 372 (393)
T 4gq1_A 326 RYMDYFATAHSQHGLIQLINTYE----------KDSNSIPIQLGMPIVDFCWHQDGS 372 (393)
T ss_dssp SCTTEEEEEETTTTEEEEEETTC----------TTCCEEEEECSSCEEEEEECTTSS
T ss_pred CCCCEEEEEECCCCEEEEEECCC----------CcEEEEecCCCCcEEEEEEcCCCC
Confidence 4446788899999999999975 344556788999999999999764
|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 | Back alignment and structure |
|---|
Probab=99.93 E-value=2.8e-25 Score=204.22 Aligned_cols=258 Identities=17% Similarity=0.266 Sum_probs=187.4
Q ss_pred hhhhhhhhhcCcchheeecccccccCceeeEecCCcccccCCCCccccccCcceeeeccccCC-CCCcEEEEEEecCCCc
Q psy4579 17 NEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSD-EQNHLLIASVQLPNED 95 (368)
Q Consensus 17 ~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~ 95 (368)
+...++|+..+..+...+.. +..++.+++| +++.|++|+.||.+.+|+.. .+..... ......|.++.+.+.
T Consensus 152 dg~i~iwd~~~~~~~~~~~~--h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~--~~~~~~~~~~h~~~v~~l~~~~~- 224 (435)
T 1p22_A 152 DNTIKIWDKNTLECKRILTG--HTGSVLCLQY--DERVIITGSSDSTVRVWDVN--TGEMLNTLIHHCEAVLHLRFNNG- 224 (435)
T ss_dssp SSCEEEEESSSCCEEEEECC--CSSCEEEEEC--CSSEEEEEETTSCEEEEESS--SCCEEEEECCCCSCEEEEECCTT-
T ss_pred CCeEEEEeCCCCeEEEEEcC--CCCcEEEEEE--CCCEEEEEcCCCeEEEEECC--CCcEEEEEcCCCCcEEEEEEcCC-
Confidence 44677888877666555543 3568899999 88999999999999766544 3333222 112234667777432
Q ss_pred cccccCCcccCCCCcccCCCCCeee----eeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccc
Q psy4579 96 AQFDASNYDTDKGGNVQLPNEDAQF----DASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAK 171 (368)
Q Consensus 96 ~~~~~~~~~~~~~g~i~i~~~~~~~----~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~ 171 (368)
.+. ++ +.||.|++|+..... .....+|...|.+++| ++ ++|++|+.||.|++||++++. ..
T Consensus 225 -~l~-s~---s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~-~~l~s~~~dg~i~vwd~~~~~-------~~ 289 (435)
T 1p22_A 225 -MMV-TC---SKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DD-KYIVSASGDRTIKVWNTSTCE-------FV 289 (435)
T ss_dssp -EEE-EE---ETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ET-TEEEEEETTSEEEEEETTTCC-------EE
T ss_pred -EEE-Ee---eCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CC-CEEEEEeCCCeEEEEECCcCc-------EE
Confidence 222 22 468999999986432 2456789999999999 45 899999999999999998874 56
Q ss_pred eeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeeecccccCCCC
Q psy4579 172 TIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDE 251 (368)
Q Consensus 172 ~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~ 251 (368)
..+.+|...+. +++|+ +.++++|+.||.|++||++++ .++..+.+|...|.+++|++..+.+++.|+
T Consensus 290 ~~~~~~~~~v~---~~~~~---~~~l~~g~~dg~i~iwd~~~~-------~~~~~~~~h~~~v~~~~~~~~~l~sg~~dg 356 (435)
T 1p22_A 290 RTLNGHKRGIA---CLQYR---DRLVVSGSSDNTIRLWDIECG-------ACLRVLEGHEELVRCIRFDNKRIVSGAYDG 356 (435)
T ss_dssp EEEECCSSCEE---EEEEE---TTEEEEEETTSCEEEEETTTC-------CEEEEECCCSSCEEEEECCSSEEEEEETTS
T ss_pred EEEcCCCCcEE---EEEeC---CCEEEEEeCCCeEEEEECCCC-------CEEEEEeCCcCcEEEEEecCCEEEEEeCCC
Confidence 78889999995 88884 679999999999999999987 457788899999999999888888888888
Q ss_pred ccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECC
Q psy4579 252 QNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYT 331 (368)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~ 331 (368)
.+++|......... .. ........+ .+|.+.|.+++| ++ ..|++|+.||+|++||+.
T Consensus 357 ~i~vwd~~~~~~~~----------~~---------~~~~~~~~~-~~h~~~v~~l~~--~~-~~l~s~s~Dg~i~iwd~~ 413 (435)
T 1p22_A 357 KIKVWDLVAALDPR----------AP---------AGTLCLRTL-VEHSGRVFRLQF--DE-FQIVSSSHDDTILIWDFL 413 (435)
T ss_dssp CEEEEEHHHHTSTT----------SC---------TTTTEEEEE-CCCSSCCCCEEE--CS-SCEEECCSSSEEEEEC--
T ss_pred cEEEEECCCCCCcc----------cc---------ccchheeec-cCCCCCeEEEEe--CC-CEEEEEeCCCEEEEEECC
Confidence 77777543111000 00 001123333 389999999999 55 567899999999999997
Q ss_pred C
Q psy4579 332 K 332 (368)
Q Consensus 332 ~ 332 (368)
.
T Consensus 414 ~ 414 (435)
T 1p22_A 414 N 414 (435)
T ss_dssp -
T ss_pred C
Confidence 5
|
| >3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* | Back alignment and structure |
|---|
Probab=99.92 E-value=4.3e-24 Score=192.81 Aligned_cols=241 Identities=13% Similarity=0.087 Sum_probs=172.1
Q ss_pred EEEEEEecCCCccccccCCcccCCCCcccCCCCCeee---eeccccCCCCceeeEecC-CCCCeeEEEeCCCcEEEEeCC
Q psy4579 84 LLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQF---DASNYDTDKGGYGLSWNP-SLNGYLLSASDDHTICLWDIN 159 (368)
Q Consensus 84 ~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~---~~~~~~h~~~v~~l~~sp-~~~~~lasg~~dg~v~iwd~~ 159 (368)
..|.++.+.+.+..+.+++ +.||.|++|+..... .....+|...|.+++|+| ++ .+|++++.||.|++||++
T Consensus 74 ~~v~~~~~~~~~~~~l~s~---~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~~l~s~~~d~~i~iwd~~ 149 (383)
T 3ei3_B 74 RRVTSLEWHPTHPTTVAVG---SKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNT-NQLFVSSIRGATTLRDFS 149 (383)
T ss_dssp SCEEEEEECSSCTTEEEEE---EBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEE-EEEEEEETTTEEEEEETT
T ss_pred CCEEEEEECCCCCCEEEEE---cCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCC-CEEEEEeCCCEEEEEECC
Confidence 3477788866552333333 358999999987432 223347999999999999 55 899999999999999998
Q ss_pred CCCCCCcccccceeeecc---ccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeE
Q psy4579 160 ATPKENRVIDAKTIFTGH---TAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVED 236 (368)
Q Consensus 160 ~~~~~~~~~~~~~~~~~h---~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~ 236 (368)
+. ....+..| ...+. +++|+|+ +.+|++|+.||.|++||++. .++..+.+|...|.+
T Consensus 150 ~~--------~~~~~~~~~~~~~~v~---~~~~~~~-~~~l~~~~~d~~i~i~d~~~--------~~~~~~~~h~~~v~~ 209 (383)
T 3ei3_B 150 GS--------VIQVFAKTDSWDYWYC---CVDVSVS-RQMLATGDSTGRLLLLGLDG--------HEIFKEKLHKAKVTH 209 (383)
T ss_dssp SC--------EEEEEECCCCSSCCEE---EEEEETT-TTEEEEEETTSEEEEEETTS--------CEEEEEECSSSCEEE
T ss_pred CC--------ceEEEeccCCCCCCeE---EEEECCC-CCEEEEECCCCCEEEEECCC--------CEEEEeccCCCcEEE
Confidence 53 33444444 46775 9999998 89999999999999999953 356778899999999
Q ss_pred EEEeee---cccccCCCCccceEEEE--------------------eecCC-cccccccccccCCCCCcccccCCCCcee
Q psy4579 237 YSIHRL---ILGTHTSDEQNHLLIAS--------------------VQLPN-EDAQFDASNYDTDKGDFGGFGSVSGKIE 292 (368)
Q Consensus 237 v~~~~~---~~~~~~~d~~~~~~~~~--------------------~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 292 (368)
++|++. ++.+++.|+.+++|... +.+.+ ++..+.... ..+.+.+|+..+++..
T Consensus 210 ~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~---~d~~i~iwd~~~~~~~ 286 (383)
T 3ei3_B 210 AEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTD---QRNEIRVYSSYDWSKP 286 (383)
T ss_dssp EEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEE---SSSEEEEEETTBTTSC
T ss_pred EEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEc---CCCcEEEEECCCCccc
Confidence 999873 78888888888777432 22333 222222222 2356778888777665
Q ss_pred eeeecCc-------c----------cceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeec--cc
Q psy4579 293 IEIKINH-------E----------GEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRG--HQ 353 (368)
Q Consensus 293 ~~~~~~h-------~----------~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~g--h~ 353 (368)
..+. +| . +.+..++|+|++. + +|+.||.|++||++. ...+..+.+ |.
T Consensus 287 ~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~-~--s~s~d~~i~iwd~~~----------~~~~~~l~~~~~~ 352 (383)
T 3ei3_B 287 DQII-IHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQ-L--LLNDKRTIDIYDANS----------GGLVHQLRDPNAA 352 (383)
T ss_dssp SEEE-ECCBCCCTTSCCCCCEECSSSSEEEEECBCCTT-T--CTTCCCCEEEEETTT----------CCEEEEECBTTBC
T ss_pred cccc-cccccccccccceEEeccCCCCceEEEecCCcc-c--ccCCCCeEEEEecCC----------CceeeeecCCCCC
Confidence 4443 23 2 3444566777773 3 788999999999975 344556666 56
Q ss_pred Cceeeecceeee
Q psy4579 354 KEGLIEGTYNCY 365 (368)
Q Consensus 354 ~~V~~l~w~p~~ 365 (368)
..+..++|+|+.
T Consensus 353 ~~~~~~~~s~~g 364 (383)
T 3ei3_B 353 GIISLNKFSPTG 364 (383)
T ss_dssp SCCCEEEECTTS
T ss_pred ceEEEEEEecCc
Confidence 777788999875
|
| >3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A | Back alignment and structure |
|---|
Probab=99.92 E-value=5.1e-24 Score=190.48 Aligned_cols=269 Identities=13% Similarity=0.131 Sum_probs=165.5
Q ss_pred cccccCceeeEecCCcccccCCCCccccccCcceeeeccccCC--CCCcEEEEEEecCCCccccccCCcccCCCCcccCC
Q psy4579 37 HALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSD--EQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLP 114 (368)
Q Consensus 37 ~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~ 114 (368)
..+.-++.+++|+||+++|++|++++ +++|+ ...+..... ... +..+.+......+...+ +.+++|++|
T Consensus 16 ~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~--~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~---~~d~~v~iW 86 (355)
T 3vu4_A 16 NHVSNPVTDYEFNQDQSCLILSTLKS-FEIYN--VHPVAHIMSQEMRH---LSKVRMLHRTNYVAFVT---GVKEVVHIW 86 (355)
T ss_dssp ---CCCCCEEEECTTSSEEEEECSSE-EEEEE--ETTEEEEEEEECSC---CCEEEECTTSSEEEEEC---SSTTEEEEE
T ss_pred ccCCCceEEEEECCCCCEEEEEcCCE-EEEEe--cCCcceeeeeecCC---eEEEEEcCCCCEEEEEE---CCccEEEEE
Confidence 34567899999999999999998886 44454 333322221 111 22233322222221111 347899999
Q ss_pred CCCeeeeeccccCCCCceeeEecCCC----------------C------------------CeeEE--EeCCCcEEEEeC
Q psy4579 115 NEDAQFDASNYDTDKGGYGLSWNPSL----------------N------------------GYLLS--ASDDHTICLWDI 158 (368)
Q Consensus 115 ~~~~~~~~~~~~h~~~v~~l~~sp~~----------------~------------------~~las--g~~dg~v~iwd~ 158 (368)
|...........|...|.+++|+++. . ..+|. |+.||.|++||+
T Consensus 87 d~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~~~g~v~iwd~ 166 (355)
T 3vu4_A 87 DDVKKQDVSRIKVDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFNLGQIHITKL 166 (355)
T ss_dssp ETTTTEEEEEEECSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESSCTTCEEEEEC
T ss_pred ECCCCcEEEEEECCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCCCcCcEEEEEEC
Confidence 98654444445577789999988752 0 12333 467777888887
Q ss_pred CCCCCC--------Cccccc-ceeeeccccceecceeeEEeCCCCCeEEEeeCCCc-EEEEECCCCCCCCccccceeeee
Q psy4579 159 NATPKE--------NRVIDA-KTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHT-ICLWDINATPKENRVIDAKTIFT 228 (368)
Q Consensus 159 ~~~~~~--------~~~~~~-~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~-i~iwd~~~~~~~~~~~~~~~~~~ 228 (368)
.++... .....+ ...+.+|.+.|. +++|+|+ +.+|++|+.||+ |++||++++ .++..+.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~---~~~~s~~-g~~l~s~s~d~~~v~iwd~~~~-------~~~~~~~ 235 (355)
T 3vu4_A 167 QSSGSATTQDQGVQQKAILGKGVLIKAHTNPIK---MVRLNRK-SDMVATCSQDGTIIRVFKTEDG-------VLVREFR 235 (355)
T ss_dssp CC------------------CCEEECCCSSCEE---EEEECTT-SSEEEEEETTCSEEEEEETTTC-------CEEEEEE
T ss_pred CCCCccccccccccccccCcccEEEEccCCceE---EEEECCC-CCEEEEEeCCCCEEEEEECCCC-------cEEEEEE
Confidence 754310 000112 678899999996 9999998 999999999998 999999987 4567777
Q ss_pred -c-ccccEeEEEEee--ecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCccccee
Q psy4579 229 -G-HTAVVEDYSIHR--LILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVN 304 (368)
Q Consensus 229 -~-~~~~v~~v~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~ 304 (368)
+ |...|++++|+| ..+++++.|+.+++|............+... +... .+...-.-....+...+.....
T Consensus 236 ~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~-~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 309 (355)
T 3vu4_A 236 RGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGW-INMK-----YFQSEWSLCNFKLSVDKHVRGC 309 (355)
T ss_dssp CTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTT-EECC-----CCCCSSCSEEEECCCCTTCCCC
T ss_pred cCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccce-eecc-----ccccccceeEEEeccCCCCCce
Confidence 5 999999999986 5677888888888775432111000000000 0000 0000000011112222334457
Q ss_pred EEEEeCCCCcEEEEecCCCeEEEEECCC
Q psy4579 305 RARYMPQNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 305 ~~~~~p~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
.++|+|++ ..|++++.||.+++|++..
T Consensus 310 ~~a~~~d~-~~l~~~~~dg~~~~~~~~~ 336 (355)
T 3vu4_A 310 KIAWISES-SLVVVWPHTRMIETFKVVF 336 (355)
T ss_dssp EEEESSSS-EEEEEETTTTEEEEEEEEE
T ss_pred EEEEeCCC-CEEEEEeCCCeEEEEEEEc
Confidence 79999999 6788999999999999874
|
| >3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.92 E-value=9.4e-25 Score=194.34 Aligned_cols=233 Identities=9% Similarity=0.005 Sum_probs=150.7
Q ss_pred CceeeEecCCcccccCCCCccccccCcceeeeccccCCCCCcEEEEEEecCCCccccccCCcccCCCCcccCCCCCeee-
Q psy4579 42 PSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQF- 120 (368)
Q Consensus 42 ~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~- 120 (368)
..+...+.+++..+++|+.||.+++|+. ..+....... ...+..+.+.+. + ...+.|++|++|+.++..
T Consensus 38 ~~~~~~~~~d~~~l~sg~~Dg~v~iwd~--~~~~~~~~~~-~~~v~~~~~~~~---~----~s~s~D~~i~~w~~~~~~~ 107 (343)
T 3lrv_A 38 KELNKSMYYDKWVCMCRCEDGALHFTQL--KDSKTITTIT-TPNPRTGGEHPA---I----ISRGPCNRLLLLYPGNQIT 107 (343)
T ss_dssp EEECSSSSEEEEEEEEEEETTEEEEEEE--SSSSCEEEEE-EECCCTTCCCCS---E----EEECSTTEEEEEETTTEEE
T ss_pred hhhhhhhcCCCCEEEEECCCCcEEEEEC--CCCcEEEEEe-cCCceeeeeCCc---e----EEecCCCeEEEEEccCceE
Confidence 3455567789999999999999966654 3332211110 011111222111 1 122468999999766432
Q ss_pred ---------ee-ccccCCCCceeeEecC--CCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeee-ccccceecceee
Q psy4579 121 ---------DA-SNYDTDKGGYGLSWNP--SLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFT-GHTAVVEVRYGL 187 (368)
Q Consensus 121 ---------~~-~~~~h~~~v~~l~~sp--~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~i 187 (368)
.. ...+|.+.|.+++|+| ++ ++|++|+.||+|++||++++. ...... .|...+. ++
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~l~s~s~dg~i~~wd~~~~~-------~~~~~~~~~~~~i~---~~ 176 (343)
T 3lrv_A 108 ILDSKTNKVLREIEVDSANEIIYMYGHNEVNT-EYFIWADNRGTIGFQSYEDDS-------QYIVHSAKSDVEYS---SG 176 (343)
T ss_dssp EEETTTCCEEEEEECCCSSCEEEEECCC---C-CEEEEEETTCCEEEEESSSSC-------EEEEECCCSSCCCC---EE
T ss_pred EeecCCcceeEEeecCCCCCEEEEEcCCCCCC-CEEEEEeCCCcEEEEECCCCc-------EEEEEecCCCCceE---EE
Confidence 11 2235778999999999 88 899999999999999998764 233333 3455675 99
Q ss_pred EEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeec-ccccEeEEEEee--ecccccCCCCccceEEEEeecCC
Q psy4579 188 SWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTG-HTAVVEDYSIHR--LILGTHTSDEQNHLLIASVQLPN 264 (368)
Q Consensus 188 ~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~v~~v~~~~--~~~~~~~~d~~~~~~~~~~~~~~ 264 (368)
+|+|+ +.+|++|+.||.|++||++++.. ....+.+ |...|.+++|+| ..+++++. +.+++|
T Consensus 177 ~~~pd-g~~lasg~~dg~i~iwd~~~~~~------~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~-~~v~iw-------- 240 (343)
T 3lrv_A 177 VLHKD-SLLLALYSPDGILDVYNLSSPDQ------ASSRFPVDEEAKIKEVKFADNGYWMVVECD-QTVVCF-------- 240 (343)
T ss_dssp EECTT-SCEEEEECTTSCEEEEESSCTTS------CCEECCCCTTSCEEEEEECTTSSEEEEEES-SBEEEE--------
T ss_pred EECCC-CCEEEEEcCCCEEEEEECCCCCC------CccEEeccCCCCEEEEEEeCCCCEEEEEeC-CeEEEE--------
Confidence 99998 99999999999999999998742 1156676 999999999986 23333332 233333
Q ss_pred cccccccccccCCCCCcccccCCCCceeeeee--cCcccce--eEEEEeCCCCcEEEEecC-CCeEEEEECCC
Q psy4579 265 EDAQFDASNYDTDKGDFGGFGSVSGKIEIEIK--INHEGEV--NRARYMPQNPCVIATKTP-SSDVLVFDYTK 332 (368)
Q Consensus 265 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~--~~h~~~i--~~~~~~p~~~~~lasgs~-Dg~i~iwd~~~ 332 (368)
|+++++....+. ..|...+ .+++|+|++ .+|++++. |+.|++|++..
T Consensus 241 --------------------d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~l~~~s~~d~~i~v~~~~~ 292 (343)
T 3lrv_A 241 --------------------DLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSG-KNMIAYSNESNSLTIYKFDK 292 (343)
T ss_dssp --------------------ETTSSTTCBSSCCCBC-----CCEEEEECTTS-SEEEEEETTTTEEEEEEECT
T ss_pred --------------------EcCCCCcceeecccccccccccceEEEECCCC-CEEEEecCCCCcEEEEEEcc
Confidence 222222221111 0233344 469999999 57778777 99999999964
|
| >3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.91 E-value=9.6e-24 Score=206.81 Aligned_cols=229 Identities=14% Similarity=0.155 Sum_probs=170.7
Q ss_pred EEEEEEecCCCccccccCCcccCCCCcccCCCCC---eeeeeccccCCCCceeeEecCC--CCCeeEEEeCCCcEEEEeC
Q psy4579 84 LLIASVQLPNEDAQFDASNYDTDKGGNVQLPNED---AQFDASNYDTDKGGYGLSWNPS--LNGYLLSASDDHTICLWDI 158 (368)
Q Consensus 84 ~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~---~~~~~~~~~h~~~v~~l~~sp~--~~~~lasg~~dg~v~iwd~ 158 (368)
..|.++.+.+.+..+.++ +.||.|++|+.. ......+.+|.+.|++++|+|+ + ++|++|+.||.|++||+
T Consensus 10 ~~V~~l~~s~dg~~latg----~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~-~~l~s~s~Dg~I~vwd~ 84 (753)
T 3jro_A 10 ELIHDAVLDYYGKRLATC----SSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFG-TILASCSYDGKVLIWKE 84 (753)
T ss_dssp CCEEEECCCSSSCCEEEE----ETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSC-SEEEEEETTSCEEEEEE
T ss_pred ceeEEEEECCCCCeEEEE----ECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCC-CEEEEEeCCCeEEEEEC
Confidence 347778886655444333 358999999975 3456677889999999999988 7 89999999999999999
Q ss_pred CCCCCCCcccccceeeeccccceecceeeEEeCCC-CCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEE
Q psy4579 159 NATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSL-NGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDY 237 (368)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~-~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v 237 (368)
.++.. .....+.+|...|. +++|+|+. +.++++|+.||.|++||+++... .....+.+|...|.++
T Consensus 85 ~~~~~-----~~~~~~~~h~~~V~---~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~-----~~~~~~~~~~~~v~~l 151 (753)
T 3jro_A 85 ENGRW-----SQIAVHAVHSASVN---SVQWAPHEYGPLLLVASSDGKVSVVEFKENGT-----TSPIIIDAHAIGVNSA 151 (753)
T ss_dssp ETTEE-----EEEEEECCCSSCEE---EEEECCGGGCSEEEEEETTSEEEEEECCSSSC-----CCCEEEECCSSCEEEE
T ss_pred CCCcc-----cccccccCCCCCeE---EEEECCCCCCCEEEEEeCCCcEEEEEeecCCC-----cceeEeecCCCceEEE
Confidence 87631 14567788999996 99999974 67999999999999999988643 2234567899999999
Q ss_pred EEeee---------------cccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCC----ceeeeeecC
Q psy4579 238 SIHRL---------------ILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSG----KIEIEIKIN 298 (368)
Q Consensus 238 ~~~~~---------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~----~~~~~~~~~ 298 (368)
+|+|. .+.+++.|+.+++ |+..++ .....+ .+
T Consensus 152 ~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~i----------------------------wd~~~~~~~~~~~~~~-~~ 202 (753)
T 3jro_A 152 SWAPATIEEDGEHNGTKESRKFVTGGADNLVKI----------------------------WKYNSDAQTYVLESTL-EG 202 (753)
T ss_dssp EECCCC---------CGGGCCEEEEETTSCEEE----------------------------EEEETTTTEEEEEEEE-CC
T ss_pred EecCcccccccccccCCCCCEEEEEECCCeEEE----------------------------EeccCCcccceeeeee-cC
Confidence 99873 3334444444443 333333 222333 38
Q ss_pred cccceeEEEEeCC---CCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeecccCceeeecceeee
Q psy4579 299 HEGEVNRARYMPQ---NPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 299 h~~~i~~~~~~p~---~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p~~ 365 (368)
|...|.+++|+|+ + .+|++|+.||.|++||++..... .........+|.+.|++++|+|+.
T Consensus 203 h~~~V~~l~~sp~~~~~-~~l~s~s~Dg~I~iwd~~~~~~~-----~~~~~~~~~~~~~~v~~l~~spdg 266 (753)
T 3jro_A 203 HSDWVRDVAWSPTVLLR-SYLASVSQDRTCIIWTQDNEQGP-----WKKTLLKEEKFPDVLWRASWSLSG 266 (753)
T ss_dssp CSSCEEEEEECCCCSSS-EEEEEEESSSCEEEEEESSSSSC-----CBCCBSSSSCCSSCCCCEEECTTT
T ss_pred CCCcEEEEEeccCCCCC-CEEEEEecCCEEEEecCCCCCCc-----ceeEEeccCCCCCceEEEEEcCCC
Confidence 9999999999999 6 78999999999999999863210 011233445799999999999874
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* | Back alignment and structure |
|---|
Probab=99.91 E-value=8.5e-24 Score=194.87 Aligned_cols=280 Identities=16% Similarity=0.208 Sum_probs=206.6
Q ss_pred hhhhhhhhhcCcchheeecccccccCceeeEecCCcccccCCCCccccccCcceeeeccccCC-CCCcEEEEEEecCCCc
Q psy4579 17 NEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSD-EQNHLLIASVQLPNED 95 (368)
Q Consensus 17 ~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~ 95 (368)
+...++|+..+..+...+.. +..++.+++|+ ++.+++|+.||.+.+|+.. .+..... ......|.++.+..
T Consensus 138 dg~i~vwd~~~~~~~~~~~~--h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~--~~~~~~~~~~h~~~v~~~~~~~-- 209 (445)
T 2ovr_B 138 DNTLKVWSAVTGKCLRTLVG--HTGGVWSSQMR--DNIIISGSTDRTLKVWNAE--TGECIHTLYGHTSTVRCMHLHE-- 209 (445)
T ss_dssp TSCEEEEETTTCCEEEECCC--CSSCEEEEEEE--TTEEEEEETTSCEEEEETT--TTEEEEEECCCSSCEEEEEEET--
T ss_pred CCcEEEEECCCCcEEEEEcC--CCCCEEEEEec--CCEEEEEeCCCeEEEEECC--cCcEEEEECCCCCcEEEEEecC--
Confidence 45677888877766555543 45688999997 5689999999999776543 3332222 11122355666632
Q ss_pred cccccCCcccCCCCcccCCCCCe-eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceee
Q psy4579 96 AQFDASNYDTDKGGNVQLPNEDA-QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIF 174 (368)
Q Consensus 96 ~~~~~~~~~~~~~g~i~i~~~~~-~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~ 174 (368)
..+. ++ +.||.|++|+... +....+.+|...|.+++| ++ ..+++|+.||.|++||++++. +...+
T Consensus 210 ~~l~-s~---s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~-~~l~~~~~dg~i~iwd~~~~~-------~~~~~ 275 (445)
T 2ovr_B 210 KRVV-SG---SRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DG-RRVVSGAYDFMVKVWDPETET-------CLHTL 275 (445)
T ss_dssp TEEE-EE---ETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CS-SCEEEEETTSCEEEEEGGGTE-------EEEEE
T ss_pred CEEE-EE---eCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CC-CEEEEEcCCCEEEEEECCCCc-------EeEEe
Confidence 1222 22 4689999999864 556667789999999999 55 899999999999999998763 56788
Q ss_pred eccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeeecccccCCCCccc
Q psy4579 175 TGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNH 254 (368)
Q Consensus 175 ~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~ 254 (368)
.+|...+. +++| + +.++++|+.||.|++||++++ .++..+.+|...+.++.+++..+.+++.|+.++
T Consensus 276 ~~~~~~v~---~~~~--~-~~~l~~~~~d~~i~i~d~~~~-------~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~ 342 (445)
T 2ovr_B 276 QGHTNRVY---SLQF--D-GIHVVSGSLDTSIRVWDVETG-------NCIHTLTGHQSLTSGMELKDNILVSGNADSTVK 342 (445)
T ss_dssp CCCSSCEE---EEEE--C-SSEEEEEETTSCEEEEETTTC-------CEEEEECCCCSCEEEEEEETTEEEEEETTSCEE
T ss_pred cCCCCceE---EEEE--C-CCEEEEEeCCCeEEEEECCCC-------CEEEEEcCCcccEEEEEEeCCEEEEEeCCCeEE
Confidence 89999985 9998 4 889999999999999999887 456788889999999999988888888888888
Q ss_pred eEEEEe-----ecCC---ccccccccccc-------CCCCCcccccCCCCceeeeee----cCcccceeEEEEeCCCCcE
Q psy4579 255 LLIASV-----QLPN---EDAQFDASNYD-------TDKGDFGGFGSVSGKIEIEIK----INHEGEVNRARYMPQNPCV 315 (368)
Q Consensus 255 ~~~~~~-----~~~~---~~~~~~~~~~d-------~~~~~~~~~~~~~~~~~~~~~----~~h~~~i~~~~~~p~~~~~ 315 (368)
+|.... .+.. .........++ ...|.+.+|+..+++....+. .+|.+.|.+++|+|++ .+
T Consensus 343 vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~ 421 (445)
T 2ovr_B 343 IWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTK-LV 421 (445)
T ss_dssp EEETTTCCEEEEECSTTSCSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSE-EE
T ss_pred EEECCCCcEEEEEccCCCCCCCEEEEEECCCEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCE-EE
Confidence 874311 1111 11111111111 234678889999988776662 2688899999999999 79
Q ss_pred EEEecCCCe----EEEEECCC
Q psy4579 316 IATKTPSSD----VLVFDYTK 332 (368)
Q Consensus 316 lasgs~Dg~----i~iwd~~~ 332 (368)
+|+|+.||+ |.+||++.
T Consensus 422 la~~~~dg~~~~~l~v~df~~ 442 (445)
T 2ovr_B 422 CAVGSRNGTEETKLLVLDFDV 442 (445)
T ss_dssp EEEECSSSSSCCEEEEEECCC
T ss_pred EEEcccCCCCccEEEEEECCC
Confidence 999999998 99999974
|
| >4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.91 E-value=2.6e-23 Score=188.65 Aligned_cols=246 Identities=16% Similarity=0.175 Sum_probs=169.2
Q ss_pred EEEEEEecCC-CccccccCCcccCCCCcccCCCCCeeeeecc--------------ccCCCCceeeEecCCCCCeeEEEe
Q psy4579 84 LLIASVQLPN-EDAQFDASNYDTDKGGNVQLPNEDAQFDASN--------------YDTDKGGYGLSWNPSLNGYLLSAS 148 (368)
Q Consensus 84 ~~i~~~~~~~-~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~--------------~~h~~~v~~l~~sp~~~~~lasg~ 148 (368)
..|.++.+.+ .+..+..+ +.||.|++|+.+....... .+|...|.+++|+|++..+|++++
T Consensus 44 ~~v~~~~~s~~~~~~l~~~----~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~ 119 (408)
T 4a11_B 44 GGINTLDIEPVEGRYMLSG----GSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSS 119 (408)
T ss_dssp SCEEEEEECTTTCCEEEEE----ETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEE
T ss_pred CcEEEEEEecCCCCEEEEE----cCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEe
Confidence 4577888866 44333332 3589999999875332222 249999999999995448999999
Q ss_pred CCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCC--CCeEEEeeCCCcEEEEECCCCCCCCccccceee
Q psy4579 149 DDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSL--NGYLLSASDDHTICLWDINATPKENRVIDAKTI 226 (368)
Q Consensus 149 ~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~ 226 (368)
.||.|++||+.++. ....+. +...+. ++.|+|.. +.++++++.||.|++||++++ ..+..
T Consensus 120 ~d~~i~iwd~~~~~-------~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~-------~~~~~ 181 (408)
T 4a11_B 120 FDKTLKVWDTNTLQ-------TADVFN-FEETVY---SHHMSPVSTKHCLVAVGTRGPKVQLCDLKSG-------SCSHI 181 (408)
T ss_dssp TTSEEEEEETTTTE-------EEEEEE-CSSCEE---EEEECSSCSSCCEEEEEESSSSEEEEESSSS-------CCCEE
T ss_pred CCCeEEEeeCCCCc-------cceecc-CCCcee---eeEeecCCCCCcEEEEEcCCCeEEEEeCCCc-------ceeee
Confidence 99999999998763 334444 566664 89998852 349999999999999999886 34677
Q ss_pred eecccccEeEEEEeee---cccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccce
Q psy4579 227 FTGHTAVVEDYSIHRL---ILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEV 303 (368)
Q Consensus 227 ~~~~~~~v~~v~~~~~---~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i 303 (368)
+.+|...|.+++|+|. ++.+++.++.+++|..... .... ..++...+. ..........+|...|
T Consensus 182 ~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~----~~~~--~~~~~~~~~-------~~~~~~~~~~~~~~~v 248 (408)
T 4a11_B 182 LQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRA----SGCL--ITLDQHNGK-------KSQAVESANTAHNGKV 248 (408)
T ss_dssp ECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCS----SCCS--EECCTTTTC-------SCCCTTTSSCSCSSCE
T ss_pred ecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCC----Cccc--ccccccccc-------cceeeccccccccCce
Confidence 8889999999999863 4667777776666543210 0000 000000000 0000111113799999
Q ss_pred eEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCC-------------------------------------CCCCCc
Q psy4579 304 NRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPN-------------------------------------GECHPD 346 (368)
Q Consensus 304 ~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~-------------------------------------~~~~~~ 346 (368)
.+++|+|++ .+|++++.||.|++||++......... ....++
T Consensus 249 ~~~~~~~~~-~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~ 327 (408)
T 4a11_B 249 NGLCFTSDG-LHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQI 327 (408)
T ss_dssp EEEEECTTS-SEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEE
T ss_pred eEEEEcCCC-CEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcce
Confidence 999999999 678899999999999998644321110 122345
Q ss_pred eeeecccCceeeecceeee
Q psy4579 347 LRLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 347 ~~~~gh~~~V~~l~w~p~~ 365 (368)
..+.+|.+.|++++|+|+.
T Consensus 328 ~~~~~~~~~v~~~~~s~~~ 346 (408)
T 4a11_B 328 TMLKGHYKTVDCCVFQSNF 346 (408)
T ss_dssp EEECCCSSCEEEEEEETTT
T ss_pred eeeccCCCeEEEEEEcCCC
Confidence 5667899999999999975
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1.4e-23 Score=207.48 Aligned_cols=220 Identities=17% Similarity=0.218 Sum_probs=174.2
Q ss_pred EEEEEecCCCccccccCCcccCCCCcccCCCCC-eeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCC
Q psy4579 85 LIASVQLPNEDAQFDASNYDTDKGGNVQLPNED-AQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPK 163 (368)
Q Consensus 85 ~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~-~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~ 163 (368)
.|.++.|.+....+.++. .+|.|++|+.. +.....+..|...|++++|+|++ ++|++|+.||.|++||+.++.
T Consensus 15 ~v~~i~~sp~~~~la~~~----~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~vw~~~~~~- 88 (814)
T 3mkq_A 15 RVKGIDFHPTEPWVLTTL----YSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARK-NWIIVGSDDFRIRVFNYNTGE- 88 (814)
T ss_dssp CEEEEEECSSSSEEEEEE----TTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGG-TEEEEEETTSEEEEEETTTCC-
T ss_pred ceEEEEECCCCCEEEEEe----CCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCC-CEEEEEeCCCeEEEEECCCCc-
Confidence 377788866554444332 58999999975 45666777899999999999999 999999999999999998874
Q ss_pred CCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee--
Q psy4579 164 ENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR-- 241 (368)
Q Consensus 164 ~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~-- 241 (368)
....+.+|.+.|. +++|+|+ +.+|++++.||.|++||++++. .....+.+|...|.+++|+|
T Consensus 89 ------~~~~~~~~~~~v~---~~~~s~~-~~~l~~~~~dg~i~vw~~~~~~------~~~~~~~~~~~~v~~~~~~p~~ 152 (814)
T 3mkq_A 89 ------KVVDFEAHPDYIR---SIAVHPT-KPYVLSGSDDLTVKLWNWENNW------ALEQTFEGHEHFVMCVAFNPKD 152 (814)
T ss_dssp ------EEEEEECCSSCEE---EEEECSS-SSEEEEEETTSEEEEEEGGGTS------EEEEEEECCSSCEEEEEEETTE
T ss_pred ------EEEEEecCCCCEE---EEEEeCC-CCEEEEEcCCCEEEEEECCCCc------eEEEEEcCCCCcEEEEEEEcCC
Confidence 5678889999996 9999999 8999999999999999998752 34567788999999999986
Q ss_pred -ecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeC--CCCcEEEE
Q psy4579 242 -LILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMP--QNPCVIAT 318 (368)
Q Consensus 242 -~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p--~~~~~las 318 (368)
..+.+++.++.+.+| +..++.....+...|...|.+++|+| ++ .+|++
T Consensus 153 ~~~l~~~~~dg~v~vw----------------------------d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~l~~ 203 (814)
T 3mkq_A 153 PSTFASGCLDRTVKVW----------------------------SLGQSTPNFTLTTGQERGVNYVDYYPLPDK-PYMIT 203 (814)
T ss_dssp EEEEEEEETTSEEEEE----------------------------ETTCSSCSEEEECCCTTCCCEEEECCSTTC-CEEEE
T ss_pred CCEEEEEeCCCeEEEE----------------------------ECCCCcceeEEecCCCCCEEEEEEEECCCC-CEEEE
Confidence 345555554444433 33334444455545668999999999 77 68889
Q ss_pred ecCCCeEEEEECCCCCCCCCCCCCCCCceeeecccCceeeecceeee
Q psy4579 319 KTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 319 gs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p~~ 365 (368)
|+.||.|++||++. ......+.+|...|.+++|+|+.
T Consensus 204 ~~~dg~i~~~d~~~----------~~~~~~~~~~~~~v~~~~~~~~~ 240 (814)
T 3mkq_A 204 ASDDLTIKIWDYQT----------KSCVATLEGHMSNVSFAVFHPTL 240 (814)
T ss_dssp ECTTSEEEEEETTT----------TEEEEEEECCSSCEEEEEECSSS
T ss_pred EeCCCEEEEEECCC----------CcEEEEEcCCCCCEEEEEEcCCC
Confidence 99999999999975 34456778999999999999975
|
| >1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A | Back alignment and structure |
|---|
Probab=99.91 E-value=5.1e-24 Score=188.94 Aligned_cols=230 Identities=9% Similarity=-0.055 Sum_probs=164.4
Q ss_pred EEEEEEecCCCccccccCCcccCCCCcccCCCCCeee----eeccccCCCCceeeEecCCCCC-eeEEEeCCCcEEEEeC
Q psy4579 84 LLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQF----DASNYDTDKGGYGLSWNPSLNG-YLLSASDDHTICLWDI 158 (368)
Q Consensus 84 ~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~----~~~~~~h~~~v~~l~~sp~~~~-~lasg~~dg~v~iwd~ 158 (368)
..|.++.|.+....+.++ +.||.|++|+.+... ......|...|++++|+|++ . +|++|+.||.|++||+
T Consensus 12 ~~v~~~~~s~~~~~l~~~----~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~l~~~~~dg~i~~wd~ 86 (342)
T 1yfq_A 12 DYISDIKIIPSKSLLLIT----SWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNT-DLQIYVGTVQGEILKVDL 86 (342)
T ss_dssp SCEEEEEEEGGGTEEEEE----ETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESS-SEEEEEEETTSCEEEECS
T ss_pred CcEEEEEEcCCCCEEEEE----cCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCC-CcEEEEEcCCCeEEEEEe
Confidence 347777776544433332 358999999976533 55667899999999999998 8 9999999999999999
Q ss_pred -CCCCCCCcccccceeeec--cccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCc--cccceeeeeccccc
Q psy4579 159 -NATPKENRVIDAKTIFTG--HTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENR--VIDAKTIFTGHTAV 233 (368)
Q Consensus 159 -~~~~~~~~~~~~~~~~~~--h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~--~~~~~~~~~~~~~~ 233 (368)
.++. ...+.+ |...|. +++|+| +.+|++++.|+.|++||+++...... ...++..+. |...
T Consensus 87 ~~~~~--------~~~~~~~~~~~~v~---~l~~~~--~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~ 152 (342)
T 1yfq_A 87 IGSPS--------FQALTNNEANLGIC---RICKYG--DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNK 152 (342)
T ss_dssp SSSSS--------EEECBSCCCCSCEE---EEEEET--TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCC
T ss_pred ccCCc--------eEeccccCCCCceE---EEEeCC--CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCc
Confidence 7653 367788 999996 999999 78999999999999999986100000 002233444 7888
Q ss_pred EeEEEEeeecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCC-Cce-eeeeecCcccceeEEEEeC-
Q psy4579 234 VEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVS-GKI-EIEIKINHEGEVNRARYMP- 310 (368)
Q Consensus 234 v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-~~~-~~~~~~~h~~~i~~~~~~p- 310 (368)
|.+++|++..+.+++.++.+++| +... +.. .......|...|.+++|+|
T Consensus 153 v~~~~~~~~~l~~~~~d~~i~i~----------------------------d~~~~~~~~~~~~~~~~~~~i~~i~~~~~ 204 (342)
T 1yfq_A 153 IFTMDTNSSRLIVGMNNSQVQWF----------------------------RLPLCEDDNGTIEESGLKYQIRDVALLPK 204 (342)
T ss_dssp EEEEEECSSEEEEEESTTEEEEE----------------------------ESSCCTTCCCEEEECSCSSCEEEEEECSG
T ss_pred eEEEEecCCcEEEEeCCCeEEEE----------------------------ECCccccccceeeecCCCCceeEEEECCC
Confidence 99999987545555544444433 2222 221 1223336888999999999
Q ss_pred CCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeecccC---------ceeeecceeee
Q psy4579 311 QNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQK---------EGLIEGTYNCY 365 (368)
Q Consensus 311 ~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~---------~V~~l~w~p~~ 365 (368)
++ .+|++|+.||.|++|+++.... .....+...+.+|.. .|.+++|+|+.
T Consensus 205 ~~-~~l~~~~~dg~i~i~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~ 263 (342)
T 1yfq_A 205 EQ-EGYACSSIDGRVAVEFFDDQGD----DYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRH 263 (342)
T ss_dssp GG-CEEEEEETTSEEEEEECCTTCC----STTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTT
T ss_pred CC-CEEEEEecCCcEEEEEEcCCCc----ccccccceeeecccccccccccceeEEEEEEcCCC
Confidence 88 6888999999999999975310 001244556777755 99999999864
|
| >3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.90 E-value=2.5e-23 Score=191.43 Aligned_cols=238 Identities=19% Similarity=0.266 Sum_probs=161.1
Q ss_pred CCCCcEEEEEEecCCCccccccCCcccCCCCcccCCCCCee------------eeeccccCC------------CCceee
Q psy4579 79 DEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQ------------FDASNYDTD------------KGGYGL 134 (368)
Q Consensus 79 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~------------~~~~~~~h~------------~~v~~l 134 (368)
..+....|.++.|.+.+..+.++ +.||.|++|+.... ....+.+|. +.|+++
T Consensus 24 ~~~~~~~V~~v~~s~~g~~la~g----~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l 99 (447)
T 3dw8_B 24 DVAEADIISTVEFNHSGELLATG----DKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKI 99 (447)
T ss_dssp CCCGGGSEEEEEECSSSSEEEEE----ETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEE
T ss_pred cccccCcEEEEEECCCCCEEEEE----cCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEE
Confidence 34555678899997655444333 35899999997643 355677898 889999
Q ss_pred EecCCCC-CeeEEEeCCCcEEEEeCCCCCCCCc------------------cc--------------cccee-eeccccc
Q psy4579 135 SWNPSLN-GYLLSASDDHTICLWDINATPKENR------------------VI--------------DAKTI-FTGHTAV 180 (368)
Q Consensus 135 ~~sp~~~-~~lasg~~dg~v~iwd~~~~~~~~~------------------~~--------------~~~~~-~~~h~~~ 180 (368)
+|+|+++ ..|++++.||+|++||+.+...... .+ .+... ..+|...
T Consensus 100 ~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 179 (447)
T 3dw8_B 100 RWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYH 179 (447)
T ss_dssp EECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSC
T ss_pred EEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcc
Confidence 9999863 5899999999999999976321000 00 00112 3679999
Q ss_pred eecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCcccc-ceeeeecccccEeEEEEee---ecccccCCCCccceE
Q psy4579 181 VEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVID-AKTIFTGHTAVVEDYSIHR---LILGTHTSDEQNHLL 256 (368)
Q Consensus 181 v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~v~~v~~~~---~~~~~~~~d~~~~~~ 256 (368)
|. +++|+|+ +.+|++| .||.|++||++........+. ....+.+|...|.+++|+| .++++++.|+.+++|
T Consensus 180 v~---~~~~~~~-~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iw 254 (447)
T 3dw8_B 180 IN---SISINSD-YETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLC 254 (447)
T ss_dssp CC---EEEECTT-SSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEE
T ss_pred eE---EEEEcCC-CCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEE
Confidence 96 9999998 8999998 799999999985321100000 0013567999999999986 356666666655554
Q ss_pred EEEeecCCcccccccccccCCCCCcccccCCCCce----eeeeecCcc------------cceeEEEEeCCCCcEEEEec
Q psy4579 257 IASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKI----EIEIKINHE------------GEVNRARYMPQNPCVIATKT 320 (368)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~----~~~~~~~h~------------~~i~~~~~~p~~~~~lasgs 320 (368)
.. .+++. ...+. +|. ..|.+++|+|++ .+|++++
T Consensus 255 d~----------------------------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~s~~g-~~l~~~~ 304 (447)
T 3dw8_B 255 DM----------------------------RASALCDRHSKLFE-EPEDPSNRSFFSEIISSISDVKFSHSG-RYMMTRD 304 (447)
T ss_dssp ET----------------------------TTCSSSCTTCEEEC-CC-----CCHHHHHTTCEEEEEECTTS-SEEEEEE
T ss_pred EC----------------------------cCCccccceeeEec-cCCCccccccccccCceEEEEEECCCC-CEEEEee
Confidence 32 22221 11222 343 499999999999 6777888
Q ss_pred CCCeEEEEECCCCCCCCCCCCCCCCceeeecccCc---------------eeeecceeee
Q psy4579 321 PSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKE---------------GLIEGTYNCY 365 (368)
Q Consensus 321 ~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~---------------V~~l~w~p~~ 365 (368)
. +.|++||++.. ..++..+.+|... ++.++|+|+.
T Consensus 305 ~-~~v~iwd~~~~---------~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~ 354 (447)
T 3dw8_B 305 Y-LSVKVWDLNME---------NRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSD 354 (447)
T ss_dssp S-SEEEEEETTCC---------SSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTS
T ss_pred C-CeEEEEeCCCC---------ccccceeeccccccccccccccccccccceEEEECCCC
Confidence 8 99999999741 2445567777642 2348999874
|
| >1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 | Back alignment and structure |
|---|
Probab=99.89 E-value=1.7e-22 Score=182.74 Aligned_cols=262 Identities=13% Similarity=0.113 Sum_probs=177.4
Q ss_pred hhhhhhhhhcCcchheeecccccccCceeeEecCCcccc-cCCCCccccccCcceeeeccccCCCCCcEEEEEEecCCCc
Q psy4579 17 NEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSV-QLPNEDAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNED 95 (368)
Q Consensus 17 ~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 95 (368)
+...++|+..+..+...+..+ -.+.+++|+|+++++ ++++.++.+.+| +...+...........+..+.+.+.+
T Consensus 11 d~~v~v~d~~~~~~~~~~~~~---~~~~~~~~s~dg~~l~~~~~~d~~i~v~--d~~~~~~~~~~~~~~~v~~~~~spdg 85 (391)
T 1l0q_A 11 SDNISVIDVTSNKVTATIPVG---SNPMGAVISPDGTKVYVANAHSNDVSII--DTATNNVIATVPAGSSPQGVAVSPDG 85 (391)
T ss_dssp TTEEEEEETTTTEEEEEEECS---SSEEEEEECTTSSEEEEEEGGGTEEEEE--ETTTTEEEEEEECSSSEEEEEECTTS
T ss_pred CCEEEEEECCCCeEEEEeecC---CCcceEEECCCCCEEEEECCCCCeEEEE--ECCCCeEEEEEECCCCccceEECCCC
Confidence 345778888776655544433 347899999999987 567788888555 44444333221111256777776655
Q ss_pred cccccCCcccCCCCcccCCCCCeeeeeccccCCCCceeeEecCCCCCee-EEEeCCCcEEEEeCCCCCCCCcccccceee
Q psy4579 96 AQFDASNYDTDKGGNVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYL-LSASDDHTICLWDINATPKENRVIDAKTIF 174 (368)
Q Consensus 96 ~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l-asg~~dg~v~iwd~~~~~~~~~~~~~~~~~ 174 (368)
..+..++ ..++.|.+|+...........+...+.+++|+|++ +.| ++++.|+.|++||+.+++ ....+
T Consensus 86 ~~l~~~~---~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~~v~~~d~~~~~-------~~~~~ 154 (391)
T 1l0q_A 86 KQVYVTN---MASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDG-KKLYVTNNGDKTVSVINTVTKA-------VINTV 154 (391)
T ss_dssp SEEEEEE---TTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTS-SEEEEEETTTTEEEEEETTTTE-------EEEEE
T ss_pred CEEEEEE---CCCCEEEEEECCCCeEEEEEeCCCCcceEEECCCC-CEEEEEeCCCCEEEEEECCCCc-------EEEEE
Confidence 5444333 34789999998865555555566789999999998 655 788899999999998763 34556
Q ss_pred eccccceecceeeEEeCCCCCeE-EEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeeecccccCCCCcc
Q psy4579 175 TGHTAVVEVRYGLSWNPSLNGYL-LSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQN 253 (368)
Q Consensus 175 ~~h~~~v~~~~~i~~~p~~~~~l-~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~ 253 (368)
..|... . +++|+|+ +..+ ++++.|+.|++||++++. ....+. +...+.+++|++. ..
T Consensus 155 ~~~~~~-~---~~~~~~d-g~~l~~~~~~~~~v~~~d~~~~~-------~~~~~~-~~~~~~~~~~~~~---------g~ 212 (391)
T 1l0q_A 155 SVGRSP-K---GIAVTPD-GTKVYVANFDSMSISVIDTVTNS-------VIDTVK-VEAAPSGIAVNPE---------GT 212 (391)
T ss_dssp ECCSSE-E---EEEECTT-SSEEEEEETTTTEEEEEETTTTE-------EEEEEE-CSSEEEEEEECTT---------SS
T ss_pred ecCCCc-c---eEEECCC-CCEEEEEeCCCCEEEEEECCCCe-------EEEEEe-cCCCccceEECCC---------CC
Confidence 655544 3 9999998 6655 788899999999998862 233333 4556778888751 11
Q ss_pred ceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCC
Q psy4579 254 HLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
.+++.. .+...+.+.+|+..+++....+. .| ..+.+++|+|++..++++++.|+.|++||+..
T Consensus 213 ~l~~~~--------------~~~~~~~v~~~d~~~~~~~~~~~-~~-~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~ 275 (391)
T 1l0q_A 213 KAYVTN--------------VDKYFNTVSMIDTGTNKITARIP-VG-PDPAGIAVTPDGKKVYVALSFXNTVSVIDTAT 275 (391)
T ss_dssp EEEEEE--------------ECSSCCEEEEEETTTTEEEEEEE-CC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred EEEEEe--------------cCcCCCcEEEEECCCCeEEEEEe-cC-CCccEEEEccCCCEEEEEcCCCCEEEEEECCC
Confidence 222221 11123345556666666655554 34 35789999999977778989999999999975
|
| >4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A | Back alignment and structure |
|---|
Probab=99.89 E-value=1.2e-23 Score=190.67 Aligned_cols=262 Identities=11% Similarity=0.069 Sum_probs=154.9
Q ss_pred EecCCcccccCCCCccccccCcceeeecc--c-cCCCC-CcEEEEEEecCC-------CccccccCCcccCCCCcccCCC
Q psy4579 47 QWLPDVTSVQLPNEDAQFDASNYDTDKGT--H-TSDEQ-NHLLIASVQLPN-------EDAQFDASNYDTDKGGNVQLPN 115 (368)
Q Consensus 47 ~~~p~~~~l~~~~~~~~~~~~~~~~~~~~--~-~~~~~-~~~~i~~~~~~~-------~~~~~~~~~~~~~~~g~i~i~~ 115 (368)
.+.|++..|++++.|+++++|+.+...-. . ..... ....|.++.|.+ .+..+.+++ +.|++|++||
T Consensus 96 ~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~---s~D~tv~~Wd 172 (393)
T 4gq1_A 96 SSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASV---GDDCTLIIWR 172 (393)
T ss_dssp -CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEE---ETTSEEEEEE
T ss_pred ecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEE---ECCCeEEEEE
Confidence 34456778999999999977765432111 1 11222 234577777743 133444444 4699999999
Q ss_pred CC-eeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcc------------------cccceeeec
Q psy4579 116 ED-AQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRV------------------IDAKTIFTG 176 (368)
Q Consensus 116 ~~-~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~------------------~~~~~~~~~ 176 (368)
.. +........|...|.+++|+|++..+|++|+.||+|++||++++...... ........+
T Consensus 173 ~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 252 (393)
T 4gq1_A 173 LTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSG 252 (393)
T ss_dssp EETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------C
T ss_pred CCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeeccc
Confidence 75 45667788899999999999987568999999999999999876432110 001122356
Q ss_pred cccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeeecccccCCCCccceE
Q psy4579 177 HTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLL 256 (368)
Q Consensus 177 h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~ 256 (368)
|...+. ++.|++.++..|++++.|+++++||+..... ...+..|...+..+.+.+........+.....
T Consensus 253 ~~~~v~---~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~-------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 321 (393)
T 4gq1_A 253 IASSLA---NVRWIGSDGSGILAMCKSGAWLRWNLFANND-------YNEISDSTMKLGPKNLLPNVQGISLFPSLLGA- 321 (393)
T ss_dssp CSSSCS---EEEEETTTTCEEEEECTTSEEEEEEC--------------------------CCSCSEEEECSSCCSSCC-
T ss_pred ccccce---eeeeecCCCCEEEEEeCCCCEEEEECccCCC-------CceEeeecCccccEEEccccccccccCcceeE-
Confidence 777775 8999743399999999999999999988632 34455566666666554421111111000000
Q ss_pred EEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEEC
Q psy4579 257 IASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDY 330 (368)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~ 330 (368)
...+..+..+.+.. ...+.+.+|+..++....... +|..+|.+++|+|+| .+||+++.|| +.+|.+
T Consensus 322 ---~~~~~~~~~~~~sg--s~Dg~V~lwd~~~~~~~~~~~-~~~~~V~svafspdG-~~LA~as~~G-v~lvrL 387 (393)
T 4gq1_A 322 ---CPHPRYMDYFATAH--SQHGLIQLINTYEKDSNSIPI-QLGMPIVDFCWHQDG-SHLAIATEGS-VLLTRL 387 (393)
T ss_dssp ---EECSSCTTEEEEEE--TTTTEEEEEETTCTTCCEEEE-ECSSCEEEEEECTTS-SEEEEEESSE-EEEEEE
T ss_pred ---EEccCCCCEEEEEE--CCCCEEEEEECCCCcEEEEec-CCCCcEEEEEEcCCC-CEEEEEeCCC-eEEEEE
Confidence 00111122222211 234567778887787766665 788999999999999 6888987665 555555
|
| >2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.3e-21 Score=180.61 Aligned_cols=162 Identities=14% Similarity=0.149 Sum_probs=125.9
Q ss_pred cCCCCceeeEecCCCCCee-EEEeCCCcEEEEeCC--CCCCCCcccccceeee--ccccceecceeeEEeCCCCCeEEEe
Q psy4579 126 DTDKGGYGLSWNPSLNGYL-LSASDDHTICLWDIN--ATPKENRVIDAKTIFT--GHTAVVEVRYGLSWNPSLNGYLLSA 200 (368)
Q Consensus 126 ~h~~~v~~l~~sp~~~~~l-asg~~dg~v~iwd~~--~~~~~~~~~~~~~~~~--~h~~~v~~~~~i~~~p~~~~~l~s~ 200 (368)
+|.+.|++++|+|++ .+| ++|+.||.|++||+. ++. ....+. .|...+. +++|+|+ +.+|++|
T Consensus 100 ~~~~~v~~~~~s~d~-~~l~~~~~~dg~v~iwd~~~~~~~-------~~~~~~~~~~~~~v~---~~~~sp~-~~~l~~~ 167 (450)
T 2vdu_B 100 PIYSYIRNLRLTSDE-SRLIACADSDKSLLVFDVDKTSKN-------VLKLRKRFCFSKRPN---AISIAED-DTTVIIA 167 (450)
T ss_dssp CCCCCEEEEEECTTS-SEEEEEEGGGTEEEEEEECSSSSS-------CEEEEEEEECSSCEE---EEEECTT-SSEEEEE
T ss_pred ccCCceEEEEEcCCC-CEEEEEECCCCeEEEEECcCCCCc-------eeeeeecccCCCCce---EEEEcCC-CCEEEEE
Confidence 567789999999999 775 999999999999998 543 345554 5567775 9999998 8999999
Q ss_pred eCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeee-----cccccCCCCccceEEEEeecCCccccccccccc
Q psy4579 201 SDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRL-----ILGTHTSDEQNHLLIASVQLPNEDAQFDASNYD 275 (368)
Q Consensus 201 s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~-----~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d 275 (368)
+.||.|++||+.+..... .+...+.+|...|.+++|+|. .+.+++.|+.+++
T Consensus 168 ~~~g~v~~~~~~~~~~~~---~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~v-------------------- 224 (450)
T 2vdu_B 168 DKFGDVYSIDINSIPEEK---FTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKI-------------------- 224 (450)
T ss_dssp ETTSEEEEEETTSCCCSS---CCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEE--------------------
T ss_pred eCCCcEEEEecCCccccc---ccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEE--------------------
Confidence 999999999998764321 023467789999999999974 4555554444444
Q ss_pred CCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCC
Q psy4579 276 TDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
|+..++.....+..+|...|.+++|+ ++ .+|++|+.|++|++||++.
T Consensus 225 --------wd~~~~~~~~~~~~~h~~~v~~~~~s-d~-~~l~s~~~d~~v~vwd~~~ 271 (450)
T 2vdu_B 225 --------SHYPQCFIVDKWLFGHKHFVSSICCG-KD-YLLLSAGGDDKIFAWDWKT 271 (450)
T ss_dssp --------EEESCTTCEEEECCCCSSCEEEEEEC-ST-TEEEEEESSSEEEEEETTT
T ss_pred --------EECCCCceeeeeecCCCCceEEEEEC-CC-CEEEEEeCCCeEEEEECCC
Confidence 33344555555445899999999999 87 6888999999999999975
|
| >3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A | Back alignment and structure |
|---|
Probab=99.87 E-value=3.1e-21 Score=172.40 Aligned_cols=205 Identities=11% Similarity=0.101 Sum_probs=138.4
Q ss_pred ccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeE-EEee
Q psy4579 123 SNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYL-LSAS 201 (368)
Q Consensus 123 ~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l-~s~s 201 (368)
....|...|++++|+|+| .+||+|+.|| +++||+.... .....+...+. .+++.+. ++.+ ++|+
T Consensus 14 ~~~~h~~~V~~v~fs~dg-~~la~g~~~~-~~iw~~~~~~---------~~~~~~~~~~~---~~~~~~~-~~~~~~~~~ 78 (355)
T 3vu4_A 14 PENHVSNPVTDYEFNQDQ-SCLILSTLKS-FEIYNVHPVA---------HIMSQEMRHLS---KVRMLHR-TNYVAFVTG 78 (355)
T ss_dssp -----CCCCCEEEECTTS-SEEEEECSSE-EEEEEETTEE---------EEEEEECSCCC---EEEECTT-SSEEEEECS
T ss_pred ccccCCCceEEEEECCCC-CEEEEEcCCE-EEEEecCCcc---------eeeeeecCCeE---EEEEcCC-CCEEEEEEC
Confidence 456799999999999999 8999998775 7899987642 12222222353 7888887 5555 6788
Q ss_pred CCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeeecccccCCCCccceEEEEeecC-Ccccc------------
Q psy4579 202 DDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLP-NEDAQ------------ 268 (368)
Q Consensus 202 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~-~~~~~------------ 268 (368)
.|++|++||++++ .++..+. +...|.++.+++..+.... ++.+++|. .... .....
T Consensus 79 ~d~~v~iWd~~~~-------~~~~~~~-~~~~v~~v~~~~~~~~~~~-~~~i~i~d--~~~~~~~~~~~~~~~~~~~~s~ 147 (355)
T 3vu4_A 79 VKEVVHIWDDVKK-------QDVSRIK-VDAPVKDLFLSREFIVVSY-GDVISVFK--FGNPWKRITDDIRFGGVCEFSN 147 (355)
T ss_dssp STTEEEEEETTTT-------EEEEEEE-CSSCEEEEEECSSEEEEEE-TTEEEEEE--SSTTCCBSSCCEEEEEEEEEET
T ss_pred CccEEEEEECCCC-------cEEEEEE-CCCceEEEEEcCCEEEEEE-cCEEEEEE--CCCCceeeEEeccCCceEEEEc
Confidence 8999999999887 3455555 6678999999864333322 33444443 2111 00000
Q ss_pred -cccccccCCCCCcccccCCCCc----------------eeeeeecCcccceeEEEEeCCCCcEEEEecCCCe-EEEEEC
Q psy4579 269 -FDASNYDTDKGDFGGFGSVSGK----------------IEIEIKINHEGEVNRARYMPQNPCVIATKTPSSD-VLVFDY 330 (368)
Q Consensus 269 -~~~~~~d~~~~~~~~~~~~~~~----------------~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~-i~iwd~ 330 (368)
..+..-....|.+.+|+..++. ....+ .+|.+.|++++|+|++ .+||||+.||+ |++||+
T Consensus 148 ~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~-~~h~~~v~~~~~s~~g-~~l~s~s~d~~~v~iwd~ 225 (355)
T 3vu4_A 148 GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLI-KAHTNPIKMVRLNRKS-DMVATCSQDGTIIRVFKT 225 (355)
T ss_dssp TEEEEEESSCTTCEEEEECCC------------------CCEEE-CCCSSCEEEEEECTTS-SEEEEEETTCSEEEEEET
T ss_pred cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEE-EccCCceEEEEECCCC-CEEEEEeCCCCEEEEEEC
Confidence 0000002455778888887765 13334 4899999999999999 78999999998 999999
Q ss_pred CCCCCCCCCCCCCCCceeee-c-ccCceeeecceeee
Q psy4579 331 TKHPSKPDPNGECHPDLRLR-G-HQKEGLIEGTYNCY 365 (368)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~-g-h~~~V~~l~w~p~~ 365 (368)
+. ...+..+. | |.+.|++++|+|+.
T Consensus 226 ~~----------~~~~~~~~~g~h~~~v~~~~~s~~~ 252 (355)
T 3vu4_A 226 ED----------GVLVREFRRGLDRADVVDMKWSTDG 252 (355)
T ss_dssp TT----------CCEEEEEECTTCCSCEEEEEECTTS
T ss_pred CC----------CcEEEEEEcCCCCCcEEEEEECCCC
Confidence 75 44556676 6 99999999999964
|
| >3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.87 E-value=3.4e-22 Score=177.76 Aligned_cols=254 Identities=9% Similarity=0.007 Sum_probs=162.3
Q ss_pred hhhhhhhhhcCcchheeecccccccCceeeEecCCcccccCCCCccccccCcceeee-------ccccCC--CCCcEEEE
Q psy4579 17 NEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDK-------GTHTSD--EQNHLLIA 87 (368)
Q Consensus 17 ~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~-------~~~~~~--~~~~~~i~ 87 (368)
+...++|+.........+. .-++.++.|+|+ +++++.|+.+++|..+... +..... ......|.
T Consensus 57 Dg~v~iwd~~~~~~~~~~~----~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 129 (343)
T 3lrv_A 57 DGALHFTQLKDSKTITTIT----TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEII 129 (343)
T ss_dssp TTEEEEEEESSSSCEEEEE----EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEE
T ss_pred CCcEEEEECCCCcEEEEEe----cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEE
Confidence 4567788877766555444 346788999998 8999999999887544221 110000 11112467
Q ss_pred EEecCC--CccccccCCcccCCCCcccCCCCCeeeeec-c-ccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCC
Q psy4579 88 SVQLPN--EDAQFDASNYDTDKGGNVQLPNEDAQFDAS-N-YDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPK 163 (368)
Q Consensus 88 ~~~~~~--~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~-~-~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~ 163 (368)
++.+.+ .+..+... +.||.|++|+........ . ..|...|++++|+|++ .+||+|+.||.|++||++++..
T Consensus 130 ~~~~~~~~~~~~l~s~----s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg-~~lasg~~dg~i~iwd~~~~~~ 204 (343)
T 3lrv_A 130 YMYGHNEVNTEYFIWA----DNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDS-LLLALYSPDGILDVYNLSSPDQ 204 (343)
T ss_dssp EEECCC---CCEEEEE----ETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTS-CEEEEECTTSCEEEEESSCTTS
T ss_pred EEEcCCCCCCCEEEEE----eCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCC-CEEEEEcCCCEEEEEECCCCCC
Confidence 777755 43333322 368999999987543332 2 3566789999999999 9999999999999999998752
Q ss_pred CCcccccceeeec-cccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEe--EEEEe
Q psy4579 164 ENRVIDAKTIFTG-HTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVE--DYSIH 240 (368)
Q Consensus 164 ~~~~~~~~~~~~~-h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~--~v~~~ 240 (368)
....+.+ |.++|. +++|+|+ +.+|++++ |+.|++||+++..... .+..+..|...+. +++|+
T Consensus 205 ------~~~~~~~~h~~~v~---~l~fs~~-g~~l~s~~-~~~v~iwd~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 269 (343)
T 3lrv_A 205 ------ASSRFPVDEEAKIK---EVKFADN-GYWMVVEC-DQTVVCFDLRKDVGTL----AYPTYTIPEFKTGTVTYDID 269 (343)
T ss_dssp ------CCEECCCCTTSCEE---EEEECTT-SSEEEEEE-SSBEEEEETTSSTTCB----SSCCCBC-----CCEEEEEC
T ss_pred ------CccEEeccCCCCEE---EEEEeCC-CCEEEEEe-CCeEEEEEcCCCCcce----eecccccccccccceEEEEC
Confidence 2256777 999996 9999998 89999999 5599999999874321 1122222434444 58887
Q ss_pred e--ecccccCC-CCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeC---CCCc
Q psy4579 241 R--LILGTHTS-DEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMP---QNPC 314 (368)
Q Consensus 241 ~--~~~~~~~~-d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p---~~~~ 314 (368)
+ ..+++++. ++.+++|... .+...... .++..++|.| +. .
T Consensus 270 ~~g~~l~~~s~~d~~i~v~~~~----------------------------~~~~~~~~-----~~~~~~~~~~~~~~~-~ 315 (343)
T 3lrv_A 270 DSGKNMIAYSNESNSLTIYKFD----------------------------KKTKNWTK-----DEESALCLQSDTADF-T 315 (343)
T ss_dssp TTSSEEEEEETTTTEEEEEEEC----------------------------TTTCSEEE-----EEEEECCC----CCC-C
T ss_pred CCCCEEEEecCCCCcEEEEEEc----------------------------ccccceEe-----cCceeEecCcccccc-c
Confidence 5 33444333 4444444321 11111111 4567778887 66 4
Q ss_pred EEEEecCCCeEEEEECC
Q psy4579 315 VIATKTPSSDVLVFDYT 331 (368)
Q Consensus 315 ~lasgs~Dg~i~iwd~~ 331 (368)
.+++++.||.+.++-..
T Consensus 316 ~l~~~~~d~~~~~~~~~ 332 (343)
T 3lrv_A 316 DMDVVCGDGGIAAILKT 332 (343)
T ss_dssp EEEEEEETTEEEEEEEC
T ss_pred eeEEEecCCceEEEEec
Confidence 66688889998887654
|
| >3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.87 E-value=3.1e-21 Score=172.40 Aligned_cols=223 Identities=12% Similarity=0.116 Sum_probs=153.3
Q ss_pred EEEEEEecCCCc--cccccCCcccCCCCcccCCCCCe--eee-eccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeC
Q psy4579 84 LLIASVQLPNED--AQFDASNYDTDKGGNVQLPNEDA--QFD-ASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDI 158 (368)
Q Consensus 84 ~~i~~~~~~~~~--~~~~~~~~~~~~~g~i~i~~~~~--~~~-~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~ 158 (368)
..|.++.+.+.. ....+.+ +.||.|++|+.+. ... ..+.+|...|++++|+|++ ++|++|+.||.|++||+
T Consensus 40 ~~v~~~~~~~~~~~g~~l~~~---~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~dg~v~iwd~ 115 (368)
T 3mmy_A 40 DSIGCLSFSPPTLPGNFLIAG---SWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDG-SKVFTASCDKTAKMWDL 115 (368)
T ss_dssp SCEEEEEECCTTSSSEEEEEE---ETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTS-SEEEEEETTSEEEEEET
T ss_pred CceEEEEEcCCCCCceEEEEE---CCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCC-CEEEEEcCCCcEEEEEc
Confidence 458888887653 2333333 3589999999863 333 5677899999999999998 99999999999999999
Q ss_pred CCCCCCCcccccceeeeccccceecceeeEE--eCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeE
Q psy4579 159 NATPKENRVIDAKTIFTGHTAVVEVRYGLSW--NPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVED 236 (368)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~--~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~ 236 (368)
+++. ...+.+|...|. +++| +|+ +.+|++++.||.|++||++++. ++..+..+. .+.+
T Consensus 116 ~~~~--------~~~~~~~~~~v~---~~~~~~~~~-~~~l~~~~~dg~i~vwd~~~~~-------~~~~~~~~~-~~~~ 175 (368)
T 3mmy_A 116 SSNQ--------AIQIAQHDAPVK---TIHWIKAPN-YSCVMTGSWDKTLKFWDTRSSN-------PMMVLQLPE-RCYC 175 (368)
T ss_dssp TTTE--------EEEEEECSSCEE---EEEEEECSS-CEEEEEEETTSEEEEECSSCSS-------CSEEEECSS-CEEE
T ss_pred CCCC--------ceeeccccCceE---EEEEEeCCC-CCEEEEccCCCcEEEEECCCCc-------EEEEEecCC-CceE
Confidence 8763 344677999996 9999 787 8899999999999999998873 345565543 5666
Q ss_pred EEEeeecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceee-eeecCcccceeEEEEeCCCC--
Q psy4579 237 YSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEI-EIKINHEGEVNRARYMPQNP-- 313 (368)
Q Consensus 237 v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-~~~~~h~~~i~~~~~~p~~~-- 313 (368)
+.+....+..+..++...+|. ........ .....+...+.++.+.++..
T Consensus 176 ~~~~~~~~~~~~~~~~i~~~~----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (368)
T 3mmy_A 176 ADVIYPMAVVATAERGLIVYQ----------------------------LENQPSEFRRIESPLKHQHRCVAIFKDKQNK 227 (368)
T ss_dssp EEEETTEEEEEEGGGCEEEEE----------------------------CSSSCEEEEECCCSCSSCEEEEEEEECTTSC
T ss_pred EEecCCeeEEEeCCCcEEEEE----------------------------eccccchhhhccccccCCCceEEEcccCCCC
Confidence 666543333333333333322 22221111 11223445566666665542
Q ss_pred -cEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeecccC------------ceeeecceeee
Q psy4579 314 -CVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQK------------EGLIEGTYNCY 365 (368)
Q Consensus 314 -~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~------------~V~~l~w~p~~ 365 (368)
..+++|+.||.|++||++.... ..+...+.+|.. .|.+++|+|+.
T Consensus 228 ~~~~~~~~~dg~i~i~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~ 285 (368)
T 3mmy_A 228 PTGFALGSIEGRVAIHYINPPNP-------AKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVH 285 (368)
T ss_dssp EEEEEEEETTSEEEEEESSCSCH-------HHHSEEEECSEEC----CCCEEECCEEEEEECTTT
T ss_pred CCeEEEecCCCcEEEEecCCCCc-------cccceeeeeeecccccccccccccceEEEEEecCC
Confidence 2378999999999999975210 033446667766 79999999974
|
| >3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.3e-20 Score=172.67 Aligned_cols=263 Identities=10% Similarity=0.092 Sum_probs=178.8
Q ss_pred ccCceeeEecCCcccccCCCCccccccCcceeeeccccCC------CCCcEEEEEEecCCCccccccCCcccCCCCcccC
Q psy4579 40 EWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSD------EQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQL 113 (368)
Q Consensus 40 ~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i 113 (368)
.-.+.+++|+|++..+++++.++.+.+|+ ...+..... ......+..+.+++.+..+.+ + ..+|.|++
T Consensus 122 ~~~~~~~~~s~~~~~~~~~~~~~~i~~~d--~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s-~---~~d~~v~~ 195 (433)
T 3bws_A 122 GFQPKSVRFIDNTRLAIPLLEDEGMDVLD--INSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVS-Q---MQANAVHV 195 (433)
T ss_dssp SSCBCCCEESSSSEEEEEBTTSSSEEEEE--TTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEE-E---GGGTEEEE
T ss_pred CCCceEEEEeCCCeEEEEeCCCCeEEEEE--CCCCeEeeecCcccccccCCceeEEEEcCCCEEEEE-E---CCCCEEEE
Confidence 34466899999888888888898886554 443332221 122335777777554443332 2 35799999
Q ss_pred CCCCe-eeeeccccCCCCceeeEecCCCCCee-EEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeC
Q psy4579 114 PNEDA-QFDASNYDTDKGGYGLSWNPSLNGYL-LSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNP 191 (368)
Q Consensus 114 ~~~~~-~~~~~~~~h~~~v~~l~~sp~~~~~l-asg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p 191 (368)
|+.+. +....+..|...+.+++|+|++ ..+ ++++.|+.|++||+.++. ....+..+.. +. +++|+|
T Consensus 196 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~i~~~d~~~~~-------~~~~~~~~~~-~~---~~~~~~ 263 (433)
T 3bws_A 196 FDLKTLAYKATVDLTGKWSKILLYDPIR-DLVYCSNWISEDISVIDRKTKL-------EIRKTDKIGL-PR---GLLLSK 263 (433)
T ss_dssp EETTTCCEEEEEECSSSSEEEEEEETTT-TEEEEEETTTTEEEEEETTTTE-------EEEECCCCSE-EE---EEEECT
T ss_pred EECCCceEEEEEcCCCCCeeEEEEcCCC-CEEEEEecCCCcEEEEECCCCc-------EEEEecCCCC-ce---EEEEcC
Confidence 99875 4555566789999999999998 555 666689999999998763 3444554443 53 999999
Q ss_pred CCCCeEEEee--------CCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee---ecccccCCCCccceEE---
Q psy4579 192 SLNGYLLSAS--------DDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR---LILGTHTSDEQNHLLI--- 257 (368)
Q Consensus 192 ~~~~~l~s~s--------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~---~~~~~~~~d~~~~~~~--- 257 (368)
+ +.++++++ .||.|++||++++. ....+ .|...+..++|++ .++.++..++.+.+|.
T Consensus 264 ~-g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~-------~~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~ 334 (433)
T 3bws_A 264 D-GKELYIAQFSASNQESGGGRLGIYSMDKEK-------LIDTI-GPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKE 334 (433)
T ss_dssp T-SSEEEEEEEESCTTCSCCEEEEEEETTTTE-------EEEEE-EEEECEEEEEECSSTTEEEEEETTTTEEEEEETTT
T ss_pred C-CCEEEEEECCCCccccCCCeEEEEECCCCc-------EEeec-cCCCCcceEEECCCCCEEEEEecCCCEEEEEECCC
Confidence 8 88888887 58999999998762 22322 4556788899975 3556656666666652
Q ss_pred -------------EEeecCCcccccccccccCC------------CCCcccccCCCCceeeeeecCcccceeEEEEeCCC
Q psy4579 258 -------------ASVQLPNEDAQFDASNYDTD------------KGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQN 312 (368)
Q Consensus 258 -------------~~~~~~~~~~~~~~~~~d~~------------~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~ 312 (368)
..+.+.+++..+.+...+.. .|.+.+|+..+++....+. +...+.+++|+|++
T Consensus 335 ~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~--~~~~~~~~~~s~dg 412 (433)
T 3bws_A 335 KKVQKSIPVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWE--AGNQPTGLDVSPDN 412 (433)
T ss_dssp TEEEEEEECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEE--CSSSEEEEEECTTS
T ss_pred CcEEEEecCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEec--CCCCCceEEEcCCC
Confidence 12233344333333322211 3578889988888776665 35679999999999
Q ss_pred CcEEEEecCCCeEEEEECC
Q psy4579 313 PCVIATKTPSSDVLVFDYT 331 (368)
Q Consensus 313 ~~~lasgs~Dg~i~iwd~~ 331 (368)
..++++++.|+.|++|++.
T Consensus 413 ~~l~~~~~~d~~i~v~~~~ 431 (433)
T 3bws_A 413 RYLVISDFLDHQIRVYRRD 431 (433)
T ss_dssp CEEEEEETTTTEEEEEEET
T ss_pred CEEEEEECCCCeEEEEEec
Confidence 6555555569999999986
|
| >1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 | Back alignment and structure |
|---|
Probab=99.84 E-value=3.7e-20 Score=167.36 Aligned_cols=249 Identities=9% Similarity=0.054 Sum_probs=160.4
Q ss_pred ccccCCCCccccccCcceeeeccccCCCCCcEEEEEEecCCCccccccCCcccCCCCcccCCCCCeeeeeccccCCCCce
Q psy4579 53 TSVQLPNEDAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQFDASNYDTDKGGY 132 (368)
Q Consensus 53 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~h~~~v~ 132 (368)
..+++++.++.+.+|+. ..+........+..+.++.+.+.+..+.+++ ..++.|++|+...........+...+.
T Consensus 3 ~l~vs~~~d~~v~v~d~--~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~---~~d~~i~v~d~~~~~~~~~~~~~~~v~ 77 (391)
T 1l0q_A 3 FAYIANSESDNISVIDV--TSNKVTATIPVGSNPMGAVISPDGTKVYVAN---AHSNDVSIIDTATNNVIATVPAGSSPQ 77 (391)
T ss_dssp EEEEEETTTTEEEEEET--TTTEEEEEEECSSSEEEEEECTTSSEEEEEE---GGGTEEEEEETTTTEEEEEEECSSSEE
T ss_pred EEEEEcCCCCEEEEEEC--CCCeEEEEeecCCCcceEEECCCCCEEEEEC---CCCCeEEEEECCCCeEEEEEECCCCcc
Confidence 34667888888865544 4333322211112256777866655443332 247899999986544444444455999
Q ss_pred eeEecCCCCCee-EEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeE-EEeeCCCcEEEEE
Q psy4579 133 GLSWNPSLNGYL-LSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYL-LSASDDHTICLWD 210 (368)
Q Consensus 133 ~l~~sp~~~~~l-asg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l-~s~s~dg~i~iwd 210 (368)
+++|+|++ +.| ++++.|+.|++||+.+++ ....+..|. .+. +++|+|+ +..+ ++++.|+.|++||
T Consensus 78 ~~~~spdg-~~l~~~~~~~~~v~v~d~~~~~-------~~~~~~~~~-~~~---~~~~s~d-g~~l~~~~~~~~~v~~~d 144 (391)
T 1l0q_A 78 GVAVSPDG-KQVYVTNMASSTLSVIDTTSNT-------VAGTVKTGK-SPL---GLALSPD-GKKLYVTNNGDKTVSVIN 144 (391)
T ss_dssp EEEECTTS-SEEEEEETTTTEEEEEETTTTE-------EEEEEECSS-SEE---EEEECTT-SSEEEEEETTTTEEEEEE
T ss_pred ceEECCCC-CEEEEEECCCCEEEEEECCCCe-------EEEEEeCCC-Ccc---eEEECCC-CCEEEEEeCCCCEEEEEE
Confidence 99999999 655 566678999999998764 345555554 443 9999999 6655 7889999999999
Q ss_pred CCCCCCCCccccceeeeecccccEeEEEEeeecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCc
Q psy4579 211 INATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGK 290 (368)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 290 (368)
++++ .....+..+ ..+.+++|++. ...+++.. ...+.+.+|+..+++
T Consensus 145 ~~~~-------~~~~~~~~~-~~~~~~~~~~d---------g~~l~~~~----------------~~~~~v~~~d~~~~~ 191 (391)
T 1l0q_A 145 TVTK-------AVINTVSVG-RSPKGIAVTPD---------GTKVYVAN----------------FDSMSISVIDTVTNS 191 (391)
T ss_dssp TTTT-------EEEEEEECC-SSEEEEEECTT---------SSEEEEEE----------------TTTTEEEEEETTTTE
T ss_pred CCCC-------cEEEEEecC-CCcceEEECCC---------CCEEEEEe----------------CCCCEEEEEECCCCe
Confidence 9876 334455544 44577888751 01111111 112334455555565
Q ss_pred eeeeeecCcccceeEEEEeCCCCcEEEEec--CCCeEEEEECCCCCCCCCCCCCCCCceeeecccCceeeecceeee
Q psy4579 291 IEIEIKINHEGEVNRARYMPQNPCVIATKT--PSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 291 ~~~~~~~~h~~~i~~~~~~p~~~~~lasgs--~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p~~ 365 (368)
....+ .+...+.+++|+|++..+++++. .|+.|++||++. ..++..+..|. .+.+++|+|..
T Consensus 192 ~~~~~--~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~----------~~~~~~~~~~~-~~~~~~~s~dg 255 (391)
T 1l0q_A 192 VIDTV--KVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGT----------NKITARIPVGP-DPAGIAVTPDG 255 (391)
T ss_dssp EEEEE--ECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTT----------TEEEEEEECCS-SEEEEEECTTS
T ss_pred EEEEE--ecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCC----------CeEEEEEecCC-CccEEEEccCC
Confidence 55444 36678999999999955554433 799999999975 23344555554 47889999864
|
| >3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=99.84 E-value=2e-20 Score=171.36 Aligned_cols=209 Identities=11% Similarity=0.008 Sum_probs=147.8
Q ss_pred CCCCcccCCCCCe-eeee-----ccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeecccc
Q psy4579 106 DKGGNVQLPNEDA-QFDA-----SNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTA 179 (368)
Q Consensus 106 ~~~g~i~i~~~~~-~~~~-----~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~ 179 (368)
..++.|.+|+... +... ...+|...|.+++|+|++ .++++++.|+.|++||++++. ....+..|..
T Consensus 141 ~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~s~~~d~~v~~~d~~~~~-------~~~~~~~~~~ 212 (433)
T 3bws_A 141 LEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHN-ELWVSQMQANAVHVFDLKTLA-------YKATVDLTGK 212 (433)
T ss_dssp TTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGT-EEEEEEGGGTEEEEEETTTCC-------EEEEEECSSS
T ss_pred CCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCC-EEEEEECCCCEEEEEECCCce-------EEEEEcCCCC
Confidence 3578899999874 3333 345789999999999998 899999999999999998764 4567778888
Q ss_pred ceecceeeEEeCCCCCeE-EEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeeecccccCCCCccceEEE
Q psy4579 180 VVEVRYGLSWNPSLNGYL-LSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIA 258 (368)
Q Consensus 180 ~v~~~~~i~~~p~~~~~l-~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~ 258 (368)
.+. +++|+|+ +..+ ++++.|+.|++||++++ .....+..+ ..+.+++|++. ...++..
T Consensus 213 ~~~---~~~~~~~-~~~l~~~~~~~~~i~~~d~~~~-------~~~~~~~~~-~~~~~~~~~~~---------g~~l~~~ 271 (433)
T 3bws_A 213 WSK---ILLYDPI-RDLVYCSNWISEDISVIDRKTK-------LEIRKTDKI-GLPRGLLLSKD---------GKELYIA 271 (433)
T ss_dssp SEE---EEEEETT-TTEEEEEETTTTEEEEEETTTT-------EEEEECCCC-SEEEEEEECTT---------SSEEEEE
T ss_pred Cee---EEEEcCC-CCEEEEEecCCCcEEEEECCCC-------cEEEEecCC-CCceEEEEcCC---------CCEEEEE
Confidence 885 9999998 6655 56668999999999876 234444433 45788888751 1122222
Q ss_pred EeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCC
Q psy4579 259 SVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPD 338 (368)
Q Consensus 259 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~ 338 (368)
...... . ....+.+.+|+..+++..... .|...+.+++|+|+++.++++++.|+.|++||++.
T Consensus 272 ~~~~~~----~-----~~~dg~i~~~d~~~~~~~~~~--~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~------ 334 (433)
T 3bws_A 272 QFSASN----Q-----ESGGGRLGIYSMDKEKLIDTI--GPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKE------ 334 (433)
T ss_dssp EEESCT----T-----CSCCEEEEEEETTTTEEEEEE--EEEECEEEEEECSSTTEEEEEETTTTEEEEEETTT------
T ss_pred ECCCCc----c-----ccCCCeEEEEECCCCcEEeec--cCCCCcceEEECCCCCEEEEEecCCCEEEEEECCC------
Confidence 211000 0 012334556666666654443 56778999999999977888999999999999974
Q ss_pred CCCCCCCceeeecccCceeeecceeee
Q psy4579 339 PNGECHPDLRLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 339 ~~~~~~~~~~~~gh~~~V~~l~w~p~~ 365 (368)
...+..+ .|...+.+++|+|..
T Consensus 335 ----~~~~~~~-~~~~~~~~~~~s~dg 356 (433)
T 3bws_A 335 ----KKVQKSI-PVFDKPNTIALSPDG 356 (433)
T ss_dssp ----TEEEEEE-ECSSSEEEEEECTTS
T ss_pred ----CcEEEEe-cCCCCCCeEEEcCCC
Confidence 2222233 477889999999864
|
| >2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A | Back alignment and structure |
|---|
Probab=99.84 E-value=1.7e-19 Score=164.47 Aligned_cols=221 Identities=6% Similarity=0.044 Sum_probs=157.9
Q ss_pred CcccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCCC---cEEEEeCCCCCCCCcccccceeeeccccceecce
Q psy4579 109 GNVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDH---TICLWDINATPKENRVIDAKTIFTGHTAVVEVRY 185 (368)
Q Consensus 109 g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg---~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 185 (368)
+.|++|+.++.....+.+|...|.+++|+|+| +.||+++.|+ .|++||+.+++ ...+..|...+.
T Consensus 159 ~~i~i~d~~g~~~~~l~~~~~~v~~~~~Spdg-~~la~~s~~~~~~~i~~~d~~tg~--------~~~l~~~~~~~~--- 226 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRSPQPLMSPAWSPDG-SKLAYVTFESGRSALVIQTLANGA--------VRQVASFPRHNG--- 226 (415)
T ss_dssp EEEEEEETTSCSCEEEEEESSCEEEEEECTTS-SEEEEEECTTSSCEEEEEETTTCC--------EEEEECCSSCEE---
T ss_pred ceEEEEcCCCCCCEEEeCCCCcceeeEEcCCC-CEEEEEEecCCCcEEEEEECCCCc--------EEEeecCCCccc---
Confidence 78999999887777788899999999999999 8999999875 99999998764 245667777775
Q ss_pred eeEEeCCCCCeEE-EeeCCCc--EEEEECCCCCCCCccccceeeeecccccEeEEEEee---ecccccCCCCccceEEEE
Q psy4579 186 GLSWNPSLNGYLL-SASDDHT--ICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR---LILGTHTSDEQNHLLIAS 259 (368)
Q Consensus 186 ~i~~~p~~~~~l~-s~s~dg~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~---~~~~~~~~d~~~~~~~~~ 259 (368)
+++|+|+ +..|+ +++.|+. |.+||++++. ...+..|...+.+++|+| .++.+...++...++++.
T Consensus 227 ~~~~spd-g~~la~~~~~~g~~~i~~~d~~~~~--------~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d 297 (415)
T 2hqs_A 227 APAFSPD-GSKLAFALSKTGSLNLYVMDLASGQ--------IRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVN 297 (415)
T ss_dssp EEEECTT-SSEEEEEECTTSSCEEEEEETTTCC--------EEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred CEEEcCC-CCEEEEEEecCCCceEEEEECCCCC--------EEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEE
Confidence 9999999 77666 7777765 9999998763 345666888899999985 233333334444555443
Q ss_pred e------------------ecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecC
Q psy4579 260 V------------------QLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTP 321 (368)
Q Consensus 260 ~------------------~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~ 321 (368)
. .+.+++..+.....+.....+..|+..+++.. .+. .|. .+.+++|+|++ ..|++++.
T Consensus 298 ~~~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~-~l~-~~~-~~~~~~~spdg-~~l~~~s~ 373 (415)
T 2hqs_A 298 INGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLS-STF-LDETPSLAPNG-TMVIYSSS 373 (415)
T ss_dssp TTSSCCEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEE-ECC-CSS-SCEEEEECTTS-SEEEEEEE
T ss_pred CCCCCEEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEE-Eec-CCC-CcCCeEEcCCC-CEEEEEEc
Confidence 2 22222222222222222235667777776653 232 343 89999999999 45556666
Q ss_pred CC---eEEEEECCCCCCCCCCCCCCCCceeeecccCceeeecceeee
Q psy4579 322 SS---DVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 322 Dg---~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p~~ 365 (368)
|+ .|++||+.. .....+.+|.+.|.+++|+|-.
T Consensus 374 ~~~~~~l~~~d~~g-----------~~~~~l~~~~~~v~~~~~~~~~ 409 (415)
T 2hqs_A 374 QGMGSVLNLVSTDG-----------RFKARLPATDGQVKFPAWSPYL 409 (415)
T ss_dssp ETTEEEEEEEETTS-----------CCEEECCCSSSEEEEEEECCCC
T ss_pred CCCccEEEEEECCC-----------CcEEEeeCCCCCCcCCcccccc
Confidence 66 799999863 3455788999999999999964
|
| >2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A | Back alignment and structure |
|---|
Probab=99.83 E-value=2.6e-19 Score=154.78 Aligned_cols=172 Identities=9% Similarity=-0.015 Sum_probs=110.7
Q ss_pred CCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeC--CCCCeEEEeeCCCcEEEEECCCCCCCCccccceee
Q psy4579 149 DDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNP--SLNGYLLSASDDHTICLWDINATPKENRVIDAKTI 226 (368)
Q Consensus 149 ~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p--~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~ 226 (368)
.|+.|++|++..... ....+.+|...++ .++|+| +++.+|+||+.|++|+|||++++ +++++
T Consensus 155 ~d~~V~~~~~s~dG~------~~~s~~~~~~~v~---~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TG-------k~l~t 218 (356)
T 2w18_A 155 SDQQVEVMTFAEDGG------GKENQFLMPPEET---ILTFAEVQGMQEALLGTTIMNNIVIWNLKTG-------QLLKK 218 (356)
T ss_dssp TTCEEEEEEECTTSC------EEEEEEECCCSSC---EEEEEEEETSTTEEEEEETTSEEEEEETTTC-------CEEEE
T ss_pred CCCcEEEEEECCCCc------eeeeeccCCCcee---eEEeeccCCCCceEEEecCCCcEEEEECCCC-------cEEEE
Confidence 499999999954321 4566778998886 888888 23799999999999999999998 45677
Q ss_pred eeccc---ccEeEEEEeee--cccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeee----ec
Q psy4579 227 FTGHT---AVVEDYSIHRL--ILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEI----KI 297 (368)
Q Consensus 227 ~~~~~---~~v~~v~~~~~--~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~----~~ 297 (368)
+.+|. ..+.+++|+|. .+.+.+.+.. +|... --...+.+.+|+..+++....+ ..
T Consensus 219 L~g~~~~v~~v~~vafSpdG~~lvs~s~~~~--~w~la--------------SGs~D~tIklWd~~tgk~l~v~~~~~p~ 282 (356)
T 2w18_A 219 MHIDDSYQASVCHKAYSEMGLLFIVLSHPCA--KESES--------------LRSPVFQLIVINPKTTLSVGVMLYCLPP 282 (356)
T ss_dssp EECCC---CCCEEEEEEETTEEEEEEC----------------------------CCEEEEEEETTTTEEEEEEEECCCT
T ss_pred EcCCCcceeeeEEEEECCCCCEEEEeccCCC--cceee--------------ccCCCcEEEEEECCCCEEEEEEEeeccC
Confidence 77643 35667788871 1111111000 01000 0011223445555556554332 23
Q ss_pred CcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeecccCcee-eecceeee
Q psy4579 298 NHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGL-IEGTYNCY 365 (368)
Q Consensus 298 ~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~-~l~w~p~~ 365 (368)
+|...+.+..++ + .++|+|+.|++|+|||+.. ...+..+.+|.+.+. +++|+|+.
T Consensus 283 Gh~~~~lsg~~s--g-~~lASgS~DgTIkIWDl~t----------Gk~l~tL~gH~~~vvs~vafSPDG 338 (356)
T 2w18_A 283 GQAGRFLEGDVK--D-HCAAAILTSGTIAIWDLLL----------GQCTALLPPVSDQHWSFVKWSGTD 338 (356)
T ss_dssp TCCCCEEEEEEE--T-TEEEEEETTSCEEEEETTT----------CSEEEEECCC--CCCCEEEECSSS
T ss_pred CCcceeEccccC--C-CEEEEEcCCCcEEEEECCC----------CcEEEEecCCCCCeEEEEEECCCC
Confidence 676665555554 5 6899999999999999975 455667889998777 48999974
|
| >2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A | Back alignment and structure |
|---|
Probab=99.77 E-value=5.5e-18 Score=155.20 Aligned_cols=159 Identities=13% Similarity=0.137 Sum_probs=112.2
Q ss_pred CceeeEecCCcccccCCCCccccccCcceeeecc-ccCCCC-------------CcEEEEEEecCCCccccccCCcccCC
Q psy4579 42 PSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGT-HTSDEQ-------------NHLLIASVQLPNEDAQFDASNYDTDK 107 (368)
Q Consensus 42 ~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~-------------~~~~i~~~~~~~~~~~~~~~~~~~~~ 107 (368)
.+..++++|++..+++++.++ +.++........ ...... ....+.++.|.+.+..+.+.....+.
T Consensus 38 ~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sgs~ 116 (434)
T 2oit_A 38 RSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSEY 116 (434)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEETTT
T ss_pred CccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEeccCC
Confidence 367799999999999988887 544321110000 000000 01137788886665544421001246
Q ss_pred CCcccCCCCCee------------eeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeee
Q psy4579 108 GGNVQLPNEDAQ------------FDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFT 175 (368)
Q Consensus 108 ~g~i~i~~~~~~------------~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~ 175 (368)
||.|++|+.... ....+.+|...|++++|+|++..+||+++.||+|++||++++. ......
T Consensus 117 d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~-------~~~~~~ 189 (434)
T 2oit_A 117 GSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETV-------KVCATL 189 (434)
T ss_dssp EEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSE-------EEEEEE
T ss_pred CceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCc-------ceeecc
Confidence 899999987532 1344566999999999999844899999999999999998763 234556
Q ss_pred ccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECC
Q psy4579 176 GHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDIN 212 (368)
Q Consensus 176 ~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~ 212 (368)
+|...+. +++|+|+ +.+|++|+.||+|++||++
T Consensus 190 ~~~~~v~---~v~wspd-g~~lasgs~dg~v~iwd~~ 222 (434)
T 2oit_A 190 PSTVAVT---SVCWSPK-GKQLAVGKQNGTVVQYLPT 222 (434)
T ss_dssp CGGGCEE---EEEECTT-SSCEEEEETTSCEEEECTT
T ss_pred CCCCcee---EEEEcCC-CCEEEEEcCCCcEEEEccC
Confidence 7888886 9999999 9999999999999999987
|
| >2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A | Back alignment and structure |
|---|
Probab=99.76 E-value=5e-18 Score=155.45 Aligned_cols=203 Identities=11% Similarity=0.079 Sum_probs=135.5
Q ss_pred CcccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCC-------Cc--ccccceeeecccc
Q psy4579 109 GNVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKE-------NR--VIDAKTIFTGHTA 179 (368)
Q Consensus 109 g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~-------~~--~~~~~~~~~~h~~ 179 (368)
+.+++|+.... .....++.+++++++ .++++++.|+ +++|+....... .. ....... ..+..
T Consensus 23 ~~vri~~~~~~------~~~~~~n~lavs~~~-~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 93 (434)
T 2oit_A 23 KKVRIFDSPEE------LPKERSSLLAVSNKY-GLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLL-VPMKF 93 (434)
T ss_dssp CEEECSCCCSS------CCCSCCBCEEEETTT-TEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEE-ECCSS
T ss_pred eeEEecCCccc------cCCCCccEEEEecCC-CEEEEECCCE-EEEEEchHhhhhcccccCcccccccCcccc-ccCCC
Confidence 45777765321 123468999999998 8999999888 899876422110 00 0001111 23456
Q ss_pred ceecceeeEEeCCCCCeEE----EeeCCCcEEEEECCCCC----CCCccccceeeeecccccEeEEEEeee---cccccC
Q psy4579 180 VVEVRYGLSWNPSLNGYLL----SASDDHTICLWDINATP----KENRVIDAKTIFTGHTAVVEDYSIHRL---ILGTHT 248 (368)
Q Consensus 180 ~v~~~~~i~~~p~~~~~l~----s~s~dg~i~iwd~~~~~----~~~~~~~~~~~~~~~~~~v~~v~~~~~---~~~~~~ 248 (368)
.|. +++|+|+ +++|+ +|+.|+.|+|||+++.. ...+.+.....+.+|...|.+++|+|. ++++++
T Consensus 94 ~v~---~l~~spd-g~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s 169 (434)
T 2oit_A 94 PIH---HLALSCD-NLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCL 169 (434)
T ss_dssp CEE---EEEECTT-SCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEE
T ss_pred ccc---EEEEcCC-CCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEE
Confidence 675 9999999 88888 89999999999986541 110111224566779999999999863 455666
Q ss_pred CCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEE
Q psy4579 249 SDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVF 328 (368)
Q Consensus 249 ~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iw 328 (368)
.|+.+++|. ..++....... +|...|.+++|+|++ .+|++|+.||+|++|
T Consensus 170 ~Dg~v~iwD----------------------------~~~~~~~~~~~-~~~~~v~~v~wspdg-~~lasgs~dg~v~iw 219 (434)
T 2oit_A 170 ADGSIAVLQ----------------------------VTETVKVCATL-PSTVAVTSVCWSPKG-KQLAVGKQNGTVVQY 219 (434)
T ss_dssp TTSCEEEEE----------------------------ESSSEEEEEEE-CGGGCEEEEEECTTS-SCEEEEETTSCEEEE
T ss_pred CCCeEEEEE----------------------------cCCCcceeecc-CCCCceeEEEEcCCC-CEEEEEcCCCcEEEE
Confidence 555555543 33343333333 789999999999999 678899999999999
Q ss_pred ECCCCCCCCCCCCCCCCceeee-------cccCceeeecceeee
Q psy4579 329 DYTKHPSKPDPNGECHPDLRLR-------GHQKEGLIEGTYNCY 365 (368)
Q Consensus 329 d~~~~~~~~~~~~~~~~~~~~~-------gh~~~V~~l~w~p~~ 365 (368)
|++. .....+. .|...|.+++|+|++
T Consensus 220 d~~~-----------~~~~~~~~~~~~~~~~~~~v~~v~w~~~~ 252 (434)
T 2oit_A 220 LPTL-----------QEKKVIPCPPFYESDHPVRVLDVLWIGTY 252 (434)
T ss_dssp CTTC-----------CEEEEECCCTTCCTTSCEEEEEEEEEETT
T ss_pred ccCC-----------cccccccCCcccCCCCceeEEEEEEecCc
Confidence 9972 1111121 345589999999865
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=99.75 E-value=4.7e-18 Score=166.38 Aligned_cols=265 Identities=12% Similarity=0.095 Sum_probs=168.3
Q ss_pred ccCceeeEecCCcccccCCCC-cc-----ccccCcceeeeccccC--CCC-Cc----------------------EEEEE
Q psy4579 40 EWPSLTAQWLPDVTSVQLPNE-DA-----QFDASNYDTDKGTHTS--DEQ-NH----------------------LLIAS 88 (368)
Q Consensus 40 ~~~~~~~~~~p~~~~l~~~~~-~~-----~~~~~~~~~~~~~~~~--~~~-~~----------------------~~i~~ 88 (368)
.-++.+++|+|||++|++++. ++ .+ +.|++..|.... ... .. ..+..
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i--~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 113 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDL--WSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVD 113 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEE--EEEETTTCCEEEEECGGGTC--------------------CCEESCC
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEE--EEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcce
Confidence 346788999999999999887 76 55 555554443211 100 00 22455
Q ss_pred EecCCCccccccCCcccCCCCcccCCCCCee---eeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCC
Q psy4579 89 VQLPNEDAQFDASNYDTDKGGNVQLPNEDAQ---FDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKEN 165 (368)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~---~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~ 165 (368)
+.|.+++..+.... ++.|.+|+.++. ....+..|...+.+++|+|+| +.||.++ ++.|++||+.++..
T Consensus 114 ~~~SpDg~~l~~~~-----~~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG-~~la~~~-~~~i~~~d~~~g~~-- 184 (741)
T 2ecf_A 114 YQWSPDAQRLLFPL-----GGELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKG-GFVSFIR-GRNLWVIDLASGRQ-- 184 (741)
T ss_dssp CEECTTSSEEEEEE-----TTEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTS-SEEEEEE-TTEEEEEETTTTEE--
T ss_pred eEECCCCCEEEEEe-----CCcEEEEECCCCCcceEEEcccCCcccccccCCCCC-CEEEEEe-CCcEEEEecCCCCE--
Confidence 56655554443332 288999999876 667777888999999999999 8888887 56999999987531
Q ss_pred cccccceeeeccccc----------------eecceeeEEeCCCCCeEEEeeCCC-------------------------
Q psy4579 166 RVIDAKTIFTGHTAV----------------VEVRYGLSWNPSLNGYLLSASDDH------------------------- 204 (368)
Q Consensus 166 ~~~~~~~~~~~h~~~----------------v~~~~~i~~~p~~~~~l~s~s~dg------------------------- 204 (368)
......+... +. +++|+|+ +.+|++++.|+
T Consensus 185 -----~~~~~~~~~~~~~g~~~~v~~~~~~~~~---~~~~SpD-g~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~ 255 (741)
T 2ecf_A 185 -----MQLTADGSTTIGNGIAEFVADEEMDRHT---GYWWAPD-DSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPA 255 (741)
T ss_dssp -----EECCCCCCSSEEESCCCHHHHHHSCCCC---SEEECTT-SSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCB
T ss_pred -----EEeccCCccceeccccceeeeecccccc---ceEECCC-CCEEEEEEEcCCCCceEecCCCCCCcccceEeecCC
Confidence 1222222221 23 8999999 88888887766
Q ss_pred --------cEEEEECCC-CCCCCccccceeee--ecccccEeEEEEeeecccccCCCCccceEEEEeecCCccccccccc
Q psy4579 205 --------TICLWDINA-TPKENRVIDAKTIF--TGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASN 273 (368)
Q Consensus 205 --------~i~iwd~~~-~~~~~~~~~~~~~~--~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 273 (368)
.|.+||+.+ +.. .... ..|...+..++| +. ...+.+.... ...
T Consensus 256 ~g~~~~~~~l~~~d~~~~~~~-------~~~~~~~~~~~~~~~~~~-pD---------g~~l~~~~~~--~~~------- 309 (741)
T 2ecf_A 256 AGDANVQVKLGVISPAEQAQT-------QWIDLGKEQDIYLARVNW-RD---------PQHLSFQRQS--RDQ------- 309 (741)
T ss_dssp TTSCCCEEEEEEECSSTTCCC-------EEECCCSCSSEEEEEEEE-EE---------TTEEEEEEEE--TTS-------
T ss_pred CCCCCCeeEEEEEECCCCCce-------EEecCCCCcceEEEEEEe-CC---------CCEEEEEEec--ccC-------
Confidence 788999877 531 1211 146677888888 72 0111111110 000
Q ss_pred ccCCCCCcccccCCCCceeeeeecCccc----ceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceee
Q psy4579 274 YDTDKGDFGGFGSVSGKIEIEIKINHEG----EVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRL 349 (368)
Q Consensus 274 ~d~~~~~~~~~~~~~~~~~~~~~~~h~~----~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 349 (368)
....+..++..+++...... .|.. .+..++|+|+|. ++++++.||.++||.+... .. ...+
T Consensus 310 ---~~~~i~~~d~~~g~~~~~~~-~~~~~~~~~~~~~~~spdg~-~~~~~~~~g~~~l~~~~~~---------~~-~~~l 374 (741)
T 2ecf_A 310 ---KKLDLVEVTLASNQQRVLAH-ETSPTWVPLHNSLRFLDDGS-ILWSSERTGFQHLYRIDSK---------GK-AAAL 374 (741)
T ss_dssp ---SEEEEEEEETTTCCEEEEEE-EECSSCCCCCSCCEECTTSC-EEEEECTTSSCEEEEECSS---------SC-EEES
T ss_pred ---CeEEEEEEECCCCceEEEEE-cCCCCcCCcCCceEECCCCe-EEEEecCCCccEEEEEcCC---------CC-eeee
Confidence 11123344444555444333 2332 456899999995 8888899999899887631 12 4566
Q ss_pred ecccCceeee-cceeee
Q psy4579 350 RGHQKEGLIE-GTYNCY 365 (368)
Q Consensus 350 ~gh~~~V~~l-~w~p~~ 365 (368)
.+|...|.++ .|+|+.
T Consensus 375 ~~~~~~v~~~~~~s~dg 391 (741)
T 2ecf_A 375 THGNWSVDELLAVDEKA 391 (741)
T ss_dssp CCSSSCEEEEEEEETTT
T ss_pred eecceEEEeEeEEeCCC
Confidence 7788888887 588864
|
| >1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 | Back alignment and structure |
|---|
Probab=99.74 E-value=2.1e-17 Score=146.11 Aligned_cols=299 Identities=12% Similarity=0.095 Sum_probs=162.0
Q ss_pred hhhhhhhhhcCcchheeecccccccCceeeEecCCcccccCCCCc-cccccCcceeeecccc--CCCCCcEEEEEEecCC
Q psy4579 17 NEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNED-AQFDASNYDTDKGTHT--SDEQNHLLIASVQLPN 93 (368)
Q Consensus 17 ~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~i~~~~~~~ 93 (368)
+...++|+.+..-....+......-++.+++|+|++++|++++.+ +.+.+|..+...+... ........+..+.+.+
T Consensus 14 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 93 (343)
T 1ri6_A 14 SQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTHISTDH 93 (343)
T ss_dssp GTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCSEEEECT
T ss_pred CCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCCCCcEEEEcC
Confidence 445667766422111222223344567789999999988887665 7776555442222211 1100000234455554
Q ss_pred CccccccCCcccCCCCcccCCCC---CeeeeeccccCCCCceeeEecCCCCCeeEEEe-CCCcEEEEeCCC-CCCCCccc
Q psy4579 94 EDAQFDASNYDTDKGGNVQLPNE---DAQFDASNYDTDKGGYGLSWNPSLNGYLLSAS-DDHTICLWDINA-TPKENRVI 168 (368)
Q Consensus 94 ~~~~~~~~~~~~~~~g~i~i~~~---~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~-~dg~v~iwd~~~-~~~~~~~~ 168 (368)
.+..+.... ..++.|.+|+. ..............+.+++|+|++ +.+++++ .++.|++||+.+ +...
T Consensus 94 dg~~l~~~~---~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~~v~~~d~~~~~~~~---- 165 (343)
T 1ri6_A 94 QGQFVFVGS---YNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDN-RTLWVPALKQDRICLFTVSDDGHLV---- 165 (343)
T ss_dssp TSSEEEEEE---TTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTS-SEEEEEEGGGTEEEEEEECTTSCEE----
T ss_pred CCCEEEEEe---cCCCeEEEEECCCCccccccccccCCCCceEEEECCCC-CEEEEecCCCCEEEEEEecCCCcee----
Confidence 444343333 24788999998 333333344455679999999999 7666666 899999999986 3210
Q ss_pred ccce--eeecc-ccceecceeeEEeCCCCCeE-EEeeCCCcEEEEECCCCCCCCccccceeeeec-c--cccEeEEEEee
Q psy4579 169 DAKT--IFTGH-TAVVEVRYGLSWNPSLNGYL-LSASDDHTICLWDINATPKENRVIDAKTIFTG-H--TAVVEDYSIHR 241 (368)
Q Consensus 169 ~~~~--~~~~h-~~~v~~~~~i~~~p~~~~~l-~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~-~--~~~v~~v~~~~ 241 (368)
... .+..+ ...+. +++|+|+ +.++ +++..++.|.+||+...............+.. + ...+..++|++
T Consensus 166 -~~~~~~~~~~~~~~~~---~~~~~pd-g~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~ 240 (343)
T 1ri6_A 166 -AQDPAEVTTVEGAGPR---HMVFHPN-EQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITP 240 (343)
T ss_dssp -EEEEEEEECSTTCCEE---EEEECTT-SSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECT
T ss_pred -eecccccccCCCCCcc---eEEECCC-CCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECC
Confidence 111 22222 23443 8999999 7655 55558999999999643211110111111111 1 22455677764
Q ss_pred ---ecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCC--CC--ceeeeeecCcccceeEEEEeCCCCc
Q psy4579 242 ---LILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSV--SG--KIEIEIKINHEGEVNRARYMPQNPC 314 (368)
Q Consensus 242 ---~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~--~~~~~~~~~h~~~i~~~~~~p~~~~ 314 (368)
.++.+...++. +.+|+.. .+ +....+. .+. .+.+++|+|++..
T Consensus 241 dg~~l~v~~~~~~~----------------------------i~v~d~~~~~~~~~~~~~~~-~~~-~~~~~~~s~dg~~ 290 (343)
T 1ri6_A 241 DGRHLYACDRTASL----------------------------ITVFSVSEDGSVLSKEGFQP-TET-QPRGFNVDHSGKY 290 (343)
T ss_dssp TSSEEEEEETTTTE----------------------------EEEEEECTTSCCEEEEEEEE-CSS-SCCCEEECTTSSE
T ss_pred CCCEEEEEecCCCE----------------------------EEEEEEcCCCCceEEeeeec-CCC-ccceEEECCCCCE
Confidence 12222222222 2222222 11 1222222 233 3889999999966
Q ss_pred EEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeecccCceeeecceeee
Q psy4579 315 VIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 315 ~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p~~ 365 (368)
+++++..|+.|.+|++... .+....+..+.. .....+++|.|.-
T Consensus 291 l~~~~~~~~~v~v~~~d~~------~g~~~~~~~~~~-g~~p~~i~~~~~~ 334 (343)
T 1ri6_A 291 LIAAGQKSHHISVYEIVGE------QGLLHEKGRYAV-GQGPMWVVVNAHE 334 (343)
T ss_dssp EEEECTTTCEEEEEEEETT------TTEEEEEEEEEC-SSSCCEEEEEEEC
T ss_pred EEEecCCCCeEEEEEEcCC------CceeeEcccccc-CCCCeeEEEEccc
Confidence 6666557899999977531 121222223322 2456788888765
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=99.73 E-value=2e-17 Score=161.40 Aligned_cols=252 Identities=10% Similarity=0.060 Sum_probs=145.6
Q ss_pred ccccccCceeeEecCCcccccCCCCccccccCcceeeeccccC--CCCCc--EEEEEEecCCCccccccCCcc-----cC
Q psy4579 36 THALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTS--DEQNH--LLIASVQLPNEDAQFDASNYD-----TD 106 (368)
Q Consensus 36 ~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~--~~i~~~~~~~~~~~~~~~~~~-----~~ 106 (368)
...+.....+++|+|||+++++ +.||.+.+| +...|.... ..... ..+..+.|++++..+.....+ .+
T Consensus 12 ~~~~~~~~~~~~~spdg~~~~~-~~dg~i~~~--d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~ 88 (723)
T 1xfd_A 12 SEDFKIHDPEAKWISDTEFIYR-EQKGTVRLW--NVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHS 88 (723)
T ss_dssp CTTTCCCCCCCCBSSSSCBCCC-CSSSCEEEB--CGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSC
T ss_pred CCCCcccccccEEcCCCcEEEE-eCCCCEEEE--ECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeec
Confidence 3334445778999999997766 678877544 444443221 11110 125667776665544332211 12
Q ss_pred CCCcccCCCCCeeeeecc---ccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccce-e
Q psy4579 107 KGGNVQLPNEDAQFDASN---YDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVV-E 182 (368)
Q Consensus 107 ~~g~i~i~~~~~~~~~~~---~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v-~ 182 (368)
.++.+.+|+.++.....+ ..|...+.+++|||+| +.||.++. +.|++||+.++.. ......+...+ .
T Consensus 89 ~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG-~~la~~~~-~~i~~~~~~~g~~-------~~~~~~~~~~~~~ 159 (723)
T 1xfd_A 89 YTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKG-QQLIFIFE-NNIYYCAHVGKQA-------IRVVSTGKEGVIY 159 (723)
T ss_dssp CCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSST-TCEEEEET-TEEEEESSSSSCC-------EEEECCCBTTTEE
T ss_pred ceeeEEEEECCCCceEeccCCccccccccccEECCCC-CEEEEEEC-CeEEEEECCCCce-------EEEecCCCCCceE
Confidence 247888999876443222 3455569999999999 89998886 8999999987642 23333322221 0
Q ss_pred --------------cceeeEEeCCCCCeEEEeeCCC----------------------------------cEEEEECCCC
Q psy4579 183 --------------VRYGLSWNPSLNGYLLSASDDH----------------------------------TICLWDINAT 214 (368)
Q Consensus 183 --------------~~~~i~~~p~~~~~l~s~s~dg----------------------------------~i~iwd~~~~ 214 (368)
...+++|+|+ ++.|++++.|+ .|++||+.++
T Consensus 160 ~g~~~~v~~ee~~~~~~~~~~SpD-g~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~ 238 (723)
T 1xfd_A 160 NGLSDWLYEEEILKTHIAHWWSPD-GTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGP 238 (723)
T ss_dssp EEECCHHHHHTTSSSSEEEEECTT-SSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSS
T ss_pred CcccceeEEEEeccCcceEEECCC-CCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCC
Confidence 0027999999 88888887653 7888888775
Q ss_pred CCCCccccceeeeec------ccccEeEEEEeeecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCC
Q psy4579 215 PKENRVIDAKTIFTG------HTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVS 288 (368)
Q Consensus 215 ~~~~~~~~~~~~~~~------~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 288 (368)
.. ...+.. +...+..++|+|. +. +++....- . .....+.+|+..+
T Consensus 239 ~~-------~~~l~~~~~~~~~~~~~~~~~~SpD--------g~--~l~~~~~~--~----------~~~~~i~~~d~~~ 289 (723)
T 1xfd_A 239 TH-------DLEMMPPDDPRMREYYITMVKWATS--------TK--VAVTWLNR--A----------QNVSILTLCDATT 289 (723)
T ss_dssp CC-------CEECCCCCCGGGSSEEEEEEEESSS--------SE--EEEEEEET--T----------SCEEEEEEEETTT
T ss_pred ce-------eEEeeCCccCCCccceeEEEEEeCC--------Ce--EEEEEEcC--C----------CCeEEEEEEeCCC
Confidence 32 122222 3556777888751 11 11111000 0 0111234455555
Q ss_pred CceeeeeecCccccee----EEEEeCCCCcEEEE-ecCCC------eEEEEE
Q psy4579 289 GKIEIEIKINHEGEVN----RARYMPQNPCVIAT-KTPSS------DVLVFD 329 (368)
Q Consensus 289 ~~~~~~~~~~h~~~i~----~~~~~p~~~~~las-gs~Dg------~i~iwd 329 (368)
++........|...+. .++|+|+|..++.. +..|+ .|.+||
T Consensus 290 g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d 341 (723)
T 1xfd_A 290 GVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSS 341 (723)
T ss_dssp CCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEEC
T ss_pred CcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEe
Confidence 5544433323444443 78999999666544 56777 466666
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=99.73 E-value=4e-17 Score=159.80 Aligned_cols=257 Identities=12% Similarity=0.093 Sum_probs=158.6
Q ss_pred CceeeEecCCcccccCCCCccccccCcceeeec---cccCCCCCcEEEEEEecCCCccccccCCcccCCCCcccCCCCCe
Q psy4579 42 PSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKG---THTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDA 118 (368)
Q Consensus 42 ~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~ 118 (368)
.+.+++|+|||++|++++. +.+ +.|++..+ ....-......+..+.|.+++..+.... ++.|.+|+.++
T Consensus 110 ~v~~~~~SpDg~~l~~~~~-~~i--~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-----~~~i~~~d~~~ 181 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLG-GEL--YLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-----GRNLWVIDLAS 181 (741)
T ss_dssp ESCCCEECTTSSEEEEEET-TEE--EEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-----TTEEEEEETTT
T ss_pred CcceeEECCCCCEEEEEeC-CcE--EEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-----CCcEEEEecCC
Confidence 3778999999999998876 555 55566555 2221112223367777876665444332 45899999875
Q ss_pred eeeeccc-cCCCC----------------ceeeEecCCCCCeeEEEeCCC------------------------------
Q psy4579 119 QFDASNY-DTDKG----------------GYGLSWNPSLNGYLLSASDDH------------------------------ 151 (368)
Q Consensus 119 ~~~~~~~-~h~~~----------------v~~l~~sp~~~~~lasg~~dg------------------------------ 151 (368)
.....+. .+... +.+++|+|+| +.|+.++.|+
T Consensus 182 g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg-~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~ 260 (741)
T 2ecf_A 182 GRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDD-SAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDAN 260 (741)
T ss_dssp TEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTS-SCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCC
T ss_pred CCEEEeccCCccceeccccceeeeeccccccceEECCCC-CEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCC
Confidence 4333322 23222 5889999999 8899988766
Q ss_pred ---cEEEEeCCC-CCCCCcccccceeee--ccccceecceeeEEeCCCCCeEEEeeC-----CCcEEEEECCCCCCCCcc
Q psy4579 152 ---TICLWDINA-TPKENRVIDAKTIFT--GHTAVVEVRYGLSWNPSLNGYLLSASD-----DHTICLWDINATPKENRV 220 (368)
Q Consensus 152 ---~v~iwd~~~-~~~~~~~~~~~~~~~--~h~~~v~~~~~i~~~p~~~~~l~s~s~-----dg~i~iwd~~~~~~~~~~ 220 (368)
.|.+||+.+ +.. ..... .|...+. .++| |+ +..|+.++. +..|.+||+.++.
T Consensus 261 ~~~~l~~~d~~~~~~~-------~~~~~~~~~~~~~~---~~~~-pD-g~~l~~~~~~~~~~~~~i~~~d~~~g~----- 323 (741)
T 2ecf_A 261 VQVKLGVISPAEQAQT-------QWIDLGKEQDIYLA---RVNW-RD-PQHLSFQRQSRDQKKLDLVEVTLASNQ----- 323 (741)
T ss_dssp CEEEEEEECSSTTCCC-------EEECCCSCSSEEEE---EEEE-EE-TTEEEEEEEETTSSEEEEEEEETTTCC-----
T ss_pred CeeEEEEEECCCCCce-------EEecCCCCcceEEE---EEEe-CC-CCEEEEEEecccCCeEEEEEEECCCCc-----
Confidence 788899887 642 12221 4667775 9999 99 888876653 6789999998863
Q ss_pred ccceeeeecccc----cEeEEEEee--ecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeee
Q psy4579 221 IDAKTIFTGHTA----VVEDYSIHR--LILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIE 294 (368)
Q Consensus 221 ~~~~~~~~~~~~----~v~~v~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 294 (368)
....+..+.. .+..++|++ .++.++..++...+|.. +. .+. ...
T Consensus 324 --~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--------------------------~~-~~~-~~~ 373 (741)
T 2ecf_A 324 --QRVLAHETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRI--------------------------DS-KGK-AAA 373 (741)
T ss_dssp --EEEEEEEECSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEE--------------------------CS-SSC-EEE
T ss_pred --eEEEEEcCCCCcCCcCCceEECCCCeEEEEecCCCccEEEEE--------------------------cC-CCC-eee
Confidence 2333333332 344666754 12222222222222222 11 122 233
Q ss_pred eecCcccceeEE-EEeCCCCcEEEEecCCC--eEEEEECCCCCCCCCCCCCCCCceeeecccCceeeecceeee
Q psy4579 295 IKINHEGEVNRA-RYMPQNPCVIATKTPSS--DVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 295 ~~~~h~~~i~~~-~~~p~~~~~lasgs~Dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p~~ 365 (368)
+. .|...|..+ .|+|++..++++++.|+ .++||++.... .....+.+ ...+.+++|+|+.
T Consensus 374 l~-~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g---------~~~~~l~~-~~~~~~~~~spdg 436 (741)
T 2ecf_A 374 LT-HGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQG---------GQPQRLSK-APGMHSASFARNA 436 (741)
T ss_dssp SC-CSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTC---------CCCEECCC-SCSEEEEEECTTS
T ss_pred ee-ecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCC---------CCeeeccc-CCCceEEEECCCC
Confidence 33 677788887 59999976777777777 89999986321 22234444 5667888998864
|
| >2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.72 E-value=5.7e-17 Score=139.90 Aligned_cols=222 Identities=10% Similarity=0.027 Sum_probs=140.6
Q ss_pred EEEEEecCCCccccccCCcccCCCCcccCCCCCe-eeeecc-ccC-CCCceeeEecCCCCCeeEEEe--CCCcEEEEeCC
Q psy4579 85 LIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDA-QFDASN-YDT-DKGGYGLSWNPSLNGYLLSAS--DDHTICLWDIN 159 (368)
Q Consensus 85 ~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~-~~~~~~-~~h-~~~v~~l~~sp~~~~~lasg~--~dg~v~iwd~~ 159 (368)
.+.++.+.+.+..+... .++.|.+|+.++ ...... ..| ...+.+++|+|++ +.|++++ .++..+||.++
T Consensus 43 ~v~~~~~spdg~~l~~~-----~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg-~~l~~~~~~~~~~~~l~~~~ 116 (297)
T 2ojh_A 43 LFEAPNWSPDGKYLLLN-----SEGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDG-ALYAISDKVEFGKSAIYLLP 116 (297)
T ss_dssp CCEEEEECTTSSEEEEE-----ETTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTS-SEEEEEECTTTSSCEEEEEE
T ss_pred ceEeeEECCCCCEEEEE-----cCCeEEEEeCCCCCCceEeccccccccccceEECCCC-CEEEEEEeCCCCcceEEEEE
Confidence 35667776655544432 368999999876 443333 334 4789999999999 8899988 44566666654
Q ss_pred CCCCCCcccccceeeeccccceecceeeEEeCCCCCeEE-EeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEE
Q psy4579 160 ATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLL-SASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYS 238 (368)
Q Consensus 160 ~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~-s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~ 238 (368)
.... ....+..+.. + ..++|+|+ +..|+ +++.|+.++||++..... ....+..+...+.+++
T Consensus 117 ~~~~------~~~~~~~~~~-~---~~~~~spd-g~~l~~~~~~~~~~~l~~~~~~~~------~~~~~~~~~~~~~~~~ 179 (297)
T 2ojh_A 117 STGG------TPRLMTKNLP-S---YWHGWSPD-GKSFTYCGIRDQVFDIYSMDIDSG------VETRLTHGEGRNDGPD 179 (297)
T ss_dssp TTCC------CCEECCSSSS-E---EEEEECTT-SSEEEEEEEETTEEEEEEEETTTC------CEEECCCSSSCEEEEE
T ss_pred CCCC------ceEEeecCCC-c---cceEECCC-CCEEEEEECCCCceEEEEEECCCC------cceEcccCCCccccce
Confidence 3221 1233443433 5 38999999 67665 888999999999643321 1344556777889999
Q ss_pred Eee---ecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcE
Q psy4579 239 IHR---LILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCV 315 (368)
Q Consensus 239 ~~~---~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~ 315 (368)
|++ .++.+...++...+|.... .+.....+. .|...+.+++|+|++. .
T Consensus 180 ~s~dg~~l~~~~~~~~~~~i~~~~~---------------------------~~~~~~~~~-~~~~~~~~~~~s~dg~-~ 230 (297)
T 2ojh_A 180 YSPDGRWIYFNSSRTGQMQIWRVRV---------------------------DGSSVERIT-DSAYGDWFPHPSPSGD-K 230 (297)
T ss_dssp ECTTSSEEEEEECTTSSCEEEEEET---------------------------TSSCEEECC-CCSEEEEEEEECTTSS-E
T ss_pred ECCCCCEEEEEecCCCCccEEEECC---------------------------CCCCcEEEe-cCCcccCCeEECCCCC-E
Confidence 975 1222222233334433221 112222232 5777899999999995 5
Q ss_pred EEEecCC-----------CeEEEEECCCCCCCCCCCCCCCCceeeecccCceeeecceeeee
Q psy4579 316 IATKTPS-----------SDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYNCYL 366 (368)
Q Consensus 316 lasgs~D-----------g~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p~~~ 366 (368)
|++++.+ +.|++||+.. ++...+..+.+|...+.+++|+|+..
T Consensus 231 l~~~~~~~~~~~~~~~~~~~l~~~d~~~--------~~~~~~~~~~~~~~~~~~~~~spdg~ 284 (297)
T 2ojh_A 231 VVFVSYDADVFDHPRDLDVRVQLMDMDG--------GNVETLFDLFGGQGTMNSPNWSPDGD 284 (297)
T ss_dssp EEEEEEETTCCSCCSSEEEEEEEEETTS--------CSCEEEEEEEESTTTSCSCCBCTTSS
T ss_pred EEEEEcCCCCCcccccCceEEEEEecCC--------CCceeeeccCCCCcccccceECCCCC
Confidence 5555554 5699999974 22333444558899999999999753
|
| >2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.70 E-value=3.3e-16 Score=135.12 Aligned_cols=203 Identities=11% Similarity=0.089 Sum_probs=135.3
Q ss_pred CCCCcccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCC-CCCCCcccccceeeeccc-cceec
Q psy4579 106 DKGGNVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINA-TPKENRVIDAKTIFTGHT-AVVEV 183 (368)
Q Consensus 106 ~~~g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~-~~~~~~~~~~~~~~~~h~-~~v~~ 183 (368)
..++.|.+|+........+..|...|.+++|+|++ ++|++++ ++.|++||+.+ +. ......+|. ..+.
T Consensus 19 ~~~~~i~~~d~~~~~~~~~~~~~~~v~~~~~spdg-~~l~~~~-~~~i~~~d~~~~~~-------~~~~~~~~~~~~~~- 88 (297)
T 2ojh_A 19 SMRSSIEIFNIRTRKMRVVWQTPELFEAPNWSPDG-KYLLLNS-EGLLYRLSLAGDPS-------PEKVDTGFATICNN- 88 (297)
T ss_dssp CCCEEEEEEETTTTEEEEEEEESSCCEEEEECTTS-SEEEEEE-TTEEEEEESSSCCS-------CEECCCTTCCCBCS-
T ss_pred CcceeEEEEeCCCCceeeeccCCcceEeeEECCCC-CEEEEEc-CCeEEEEeCCCCCC-------ceEecccccccccc-
Confidence 35789999998876666777899999999999999 8888876 88999999987 53 234444553 5564
Q ss_pred ceeeEEeCCCCCeEEEee--CCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee---ecccccCCCCccceEEE
Q psy4579 184 RYGLSWNPSLNGYLLSAS--DDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR---LILGTHTSDEQNHLLIA 258 (368)
Q Consensus 184 ~~~i~~~p~~~~~l~s~s--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~---~~~~~~~~d~~~~~~~~ 258 (368)
+++|+|+ +.+|++++ .++...||.+..... ....+..+ ..+..++|+| .++.+...++...+|..
T Consensus 89 --~~~~spd-g~~l~~~~~~~~~~~~l~~~~~~~~------~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~ 158 (297)
T 2ojh_A 89 --DHGISPD-GALYAISDKVEFGKSAIYLLPSTGG------TPRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSM 158 (297)
T ss_dssp --CCEECTT-SSEEEEEECTTTSSCEEEEEETTCC------CCEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEE
T ss_pred --ceEECCC-CCEEEEEEeCCCCcceEEEEECCCC------ceEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEE
Confidence 8999999 88999988 445666665533211 12233323 3477788875 12222222232333322
Q ss_pred EeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCC
Q psy4579 259 SVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPD 338 (368)
Q Consensus 259 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~ 338 (368)
. ..++. ...+ ..|...+.+++|+|++..+++++..|+.+++|+++..
T Consensus 159 ~--------------------------~~~~~-~~~~-~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~----- 205 (297)
T 2ojh_A 159 D--------------------------IDSGV-ETRL-THGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVD----- 205 (297)
T ss_dssp E--------------------------TTTCC-EEEC-CCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETT-----
T ss_pred E--------------------------CCCCc-ceEc-ccCCCccccceECCCCCEEEEEecCCCCccEEEECCC-----
Confidence 1 11122 1222 2577889999999999656656667999999998631
Q ss_pred CCCCCCCceeeecccCceeeecceeee
Q psy4579 339 PNGECHPDLRLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 339 ~~~~~~~~~~~~gh~~~V~~l~w~p~~ 365 (368)
......+..|...+.+++|+|+.
T Consensus 206 ----~~~~~~~~~~~~~~~~~~~s~dg 228 (297)
T 2ojh_A 206 ----GSSVERITDSAYGDWFPHPSPSG 228 (297)
T ss_dssp ----SSCEEECCCCSEEEEEEEECTTS
T ss_pred ----CCCcEEEecCCcccCCeEECCCC
Confidence 23345667788889999999864
|
| >1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=2.9e-16 Score=147.74 Aligned_cols=290 Identities=13% Similarity=0.137 Sum_probs=172.5
Q ss_pred hhhhhhhhcCcchheeecccccccCceeeEecCCcccccCCCCccccccCcceeeeccccCCCCCcEEEEEEecCC----
Q psy4579 18 EEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQNHLLIASVQLPN---- 93 (368)
Q Consensus 18 ~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---- 93 (368)
....+|+..+..+...+.. ...+..++|+||+++|.+++.++.+.+|+.....+..............+.+.+
T Consensus 159 ~~V~v~D~~t~~~~~~i~~---g~~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g~~p~~va~sp~~~~ 235 (543)
T 1nir_A 159 GQIALVDGDSKKIVKVIDT---GYAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGY 235 (543)
T ss_dssp TEEEEEETTTCCEEEEEEC---STTEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEEEEECCSTTC
T ss_pred CeEEEEECCCceEEEEEec---CcccceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEecCCCcceEEeCCCcCC
Confidence 3455566655555444432 233678999999999999999988866554113333222211122356666765
Q ss_pred CccccccCCcccCCCCcccCCCCCeeee-ecccc----------CC-CCceeeEecCCCCCeeEEEeCCCcEEEEeCCCC
Q psy4579 94 EDAQFDASNYDTDKGGNVQLPNEDAQFD-ASNYD----------TD-KGGYGLSWNPSLNGYLLSASDDHTICLWDINAT 161 (368)
Q Consensus 94 ~~~~~~~~~~~~~~~g~i~i~~~~~~~~-~~~~~----------h~-~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~ 161 (368)
++..+..+.+. +++|.+||...... ..+.. |. ..+.++.++|+++.++++...++.|.+||+.+.
T Consensus 236 dg~~l~v~~~~---~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~ 312 (543)
T 1nir_A 236 EDRYTIAGAYW---PPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDI 312 (543)
T ss_dssp TTTEEEEEEEE---SSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTS
T ss_pred CCCEEEEEEcc---CCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCC
Confidence 55555444432 78899998754322 22111 33 378999999988678888889999999999875
Q ss_pred CCCCcccccceeeeccccceecceeeEEeCCCCCeEE-EeeCCCcEEEEECCCCCCCCccccceeeeec----ccccEeE
Q psy4579 162 PKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLL-SASDDHTICLWDINATPKENRVIDAKTIFTG----HTAVVED 236 (368)
Q Consensus 162 ~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~-s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~----~~~~v~~ 236 (368)
... ....+ .+...+. ++.|+|+ +.+|+ ++..+++|.+||+.++. +...+.. |......
T Consensus 313 ~~l-----~~~~i-~~~~~~~---~~~~spd-g~~l~va~~~~~~v~v~D~~tg~-------l~~~i~~g~~ph~g~g~~ 375 (543)
T 1nir_A 313 DNL-----TVTSI-GAAPFLH---DGGWDSS-HRYFMTAANNSNKVAVIDSKDRR-------LSALVDVGKTPHPGRGAN 375 (543)
T ss_dssp SSC-----EEEEE-ECCSSCC---CEEECTT-SCEEEEEEGGGTEEEEEETTTTE-------EEEEEECSSSBCCTTCEE
T ss_pred Ccc-----eeEEe-ccCcCcc---CceECCC-CCEEEEEecCCCeEEEEECCCCe-------EEEeeccCCCCCCCCCcc
Confidence 421 11123 2444453 8999999 77655 55668999999999872 3344432 4322222
Q ss_pred EEEee---ecccccC-CCCccceEEEEeecCCcccccccccccCCCCCcccccCCC-------CceeeeeecCcccceeE
Q psy4579 237 YSIHR---LILGTHT-SDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVS-------GKIEIEIKINHEGEVNR 305 (368)
Q Consensus 237 v~~~~---~~~~~~~-~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-------~~~~~~~~~~h~~~i~~ 305 (368)
+ ++| .++.+.. +++.+.+ |+..+ .++...+. +|.+.+..
T Consensus 376 ~-~~p~~g~~~~s~~~~d~~V~v----------------------------~d~~~~~~~~~~~~~v~~l~-~~g~~~~~ 425 (543)
T 1nir_A 376 F-VHPKYGPVWSTSHLGDGSISL----------------------------IGTDPKNHPQYAWKKVAELQ-GQGGGSLF 425 (543)
T ss_dssp E-EETTTEEEEEEEBSSSSEEEE----------------------------EECCTTTCTTTBTSEEEEEE-CSCSCCCC
T ss_pred c-CCCCCccEEEeccCCCceEEE----------------------------EEeCCCCCchhcCeEEEEEE-cCCCCceE
Confidence 2 121 1222221 2222222 22222 44555555 78888899
Q ss_pred EEEeCCCCcEEEEec-------CCCeEEEEECCCCCCCCCCCCCCCCce---eeecccCceeeecceeee
Q psy4579 306 ARYMPQNPCVIATKT-------PSSDVLVFDYTKHPSKPDPNGECHPDL---RLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 306 ~~~~p~~~~~lasgs-------~Dg~i~iwd~~~~~~~~~~~~~~~~~~---~~~gh~~~V~~l~w~p~~ 365 (368)
++|+|+++ .|++++ .+++|.+||+.+..... +..++. .+..|...+..++|+|..
T Consensus 426 v~~~pdg~-~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~----~~~~v~~~~~~~~~~~~~~~~~~~~~g 490 (543)
T 1nir_A 426 IKTHPKSS-HLYVDTTFNPDARISQSVAVFDLKNLDAKY----QVLPIAEWADLGEGAKRVVQPEYNKRG 490 (543)
T ss_dssp EECCTTCC-EEEECCTTCSSHHHHTCEEEEETTCTTSCC----EEECHHHHHCCCSSCCEEEEEEECSSS
T ss_pred EEcCCCCC-cEEEecCCCCCcccCceEEEEECCCCCCCe----EEeechhhcccCCCCCceEeccCCCCC
Confidence 99999995 555655 27899999998632110 000000 023567788888888764
|
| >2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A | Back alignment and structure |
|---|
Probab=99.68 E-value=5.2e-16 Score=141.42 Aligned_cols=200 Identities=8% Similarity=0.029 Sum_probs=136.7
Q ss_pred CCCC----cccCCCC--C-eeee--eccccCCCCceeeEecCC--------------CCCeeEEEeCC------CcEEEE
Q psy4579 106 DKGG----NVQLPNE--D-AQFD--ASNYDTDKGGYGLSWNPS--------------LNGYLLSASDD------HTICLW 156 (368)
Q Consensus 106 ~~~g----~i~i~~~--~-~~~~--~~~~~h~~~v~~l~~sp~--------------~~~~lasg~~d------g~v~iw 156 (368)
..+| .+++||. . ++.+ ..+.+|...+..+++++. + ..++.++.+ +.|++|
T Consensus 86 ~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~-~~l~~~s~~~~~~~~~~i~i~ 164 (415)
T 2hqs_A 86 NPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFR-TRIAYVVQTNGGQFPYELRVS 164 (415)
T ss_dssp CTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTT-CEEEEEEECSSSSCCEEEEEE
T ss_pred CCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCC-CEEEEEEecCCCCccceEEEE
Confidence 3567 8999998 4 3443 446788888988888751 4 566666654 799999
Q ss_pred eCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCC---cEEEEECCCCCCCCccccceeeeeccccc
Q psy4579 157 DINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDH---TICLWDINATPKENRVIDAKTIFTGHTAV 233 (368)
Q Consensus 157 d~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 233 (368)
|+... ....+.+|...+. +++|+|+ +..|++++.|+ .|++||++++. ...+..|...
T Consensus 165 d~~g~--------~~~~l~~~~~~v~---~~~~Spd-g~~la~~s~~~~~~~i~~~d~~tg~--------~~~l~~~~~~ 224 (415)
T 2hqs_A 165 DYDGY--------NQFVVHRSPQPLM---SPAWSPD-GSKLAYVTFESGRSALVIQTLANGA--------VRQVASFPRH 224 (415)
T ss_dssp ETTSC--------SCEEEEEESSCEE---EEEECTT-SSEEEEEECTTSSCEEEEEETTTCC--------EEEEECCSSC
T ss_pred cCCCC--------CCEEEeCCCCcce---eeEEcCC-CCEEEEEEecCCCcEEEEEECCCCc--------EEEeecCCCc
Confidence 99754 3477788988885 9999999 89999999885 99999998863 2345667788
Q ss_pred EeEEEEeee---cccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeC
Q psy4579 234 VEDYSIHRL---ILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMP 310 (368)
Q Consensus 234 v~~v~~~~~---~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p 310 (368)
+.+++|+|. ++.+.+.++... +..|+..+++. ..+. .|...+.+++|+|
T Consensus 225 ~~~~~~spdg~~la~~~~~~g~~~--------------------------i~~~d~~~~~~-~~l~-~~~~~~~~~~~sp 276 (415)
T 2hqs_A 225 NGAPAFSPDGSKLAFALSKTGSLN--------------------------LYVMDLASGQI-RQVT-DGRSNNTEPTWFP 276 (415)
T ss_dssp EEEEEECTTSSEEEEEECTTSSCE--------------------------EEEEETTTCCE-EECC-CCSSCEEEEEECT
T ss_pred ccCEEEcCCCCEEEEEEecCCCce--------------------------EEEEECCCCCE-EeCc-CCCCcccceEECC
Confidence 999999861 221222222222 23333334443 2232 6888999999999
Q ss_pred CCCcEEEEecCCC--eEEEEECCCCCCCCCCCCCCCCceeeecccCceeeecceeee
Q psy4579 311 QNPCVIATKTPSS--DVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 311 ~~~~~lasgs~Dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p~~ 365 (368)
++..+++++..++ .|.+||+.. .....+..|...+.+++|+|+.
T Consensus 277 dg~~l~~~s~~~g~~~i~~~d~~~-----------~~~~~l~~~~~~~~~~~~spdG 322 (415)
T 2hqs_A 277 DSQNLAFTSDQAGRPQVYKVNING-----------GAPQRITWEGSQNQDADVSSDG 322 (415)
T ss_dssp TSSEEEEEECTTSSCEEEEEETTS-----------SCCEECCCSSSEEEEEEECTTS
T ss_pred CCCEEEEEECCCCCcEEEEEECCC-----------CCEEEEecCCCcccCeEECCCC
Confidence 9954444433355 677778764 1123455677788999999874
|
| >3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=1.2e-15 Score=135.46 Aligned_cols=263 Identities=11% Similarity=0.042 Sum_probs=156.5
Q ss_pred ccCceeeEecCCcccccCCCC-------ccccccCcceeeeccccCCCCCcEEEEEEecCCCccccccCCcccCCCCccc
Q psy4579 40 EWPSLTAQWLPDVTSVQLPNE-------DAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQ 112 (368)
Q Consensus 40 ~~~~~~~~~~p~~~~l~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~ 112 (368)
.-.+..++|+|+++++.+++. ++.+ +.|+...+..............+.+.+++..+.... ..++.|.
T Consensus 40 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v--~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~---~~~~~v~ 114 (353)
T 3vgz_A 40 GKGAYEMAYSQQENALWLATSQSRKLDKGGVV--YRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGN---TVNSAVT 114 (353)
T ss_dssp ESSEEEEEEETTTTEEEEEECCCTTTEESEEE--EEECTTTCCEEEEEEESSCCCSEEEETTTTEEEEEE---TTTTEEE
T ss_pred ccCccceEECCCCCEEEEEcCCCcCCCCCccE--EEEcCCCCeEEEEEecCCCcceEEECCCCCEEEEEe---cCCCEEE
Confidence 344667999999998877653 3445 444443332211100000012233333333222222 2467899
Q ss_pred CCCCCeee-eeccccCCC---------CceeeEecCCCCCeeEEEe--CCCcEEEEeCCCCCCCCcccccceeeeccccc
Q psy4579 113 LPNEDAQF-DASNYDTDK---------GGYGLSWNPSLNGYLLSAS--DDHTICLWDINATPKENRVIDAKTIFTGHTAV 180 (368)
Q Consensus 113 i~~~~~~~-~~~~~~h~~---------~v~~l~~sp~~~~~lasg~--~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~ 180 (368)
+|+..... ......+.. .+.+++|+|++ +.+++++ .++.|.+||..+++ ....+..+...
T Consensus 115 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~~~i~~~d~~~~~-------~~~~~~~~~~~ 186 (353)
T 3vgz_A 115 AIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDAT-NTVYISGIGKESVIWVVDGGNIK-------LKTAIQNTGKM 186 (353)
T ss_dssp EEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTT-TEEEEEEESSSCEEEEEETTTTE-------EEEEECCCCTT
T ss_pred EEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCC-CEEEEEecCCCceEEEEcCCCCc-------eEEEecCCCCc
Confidence 99976433 233322221 26889999998 6555554 58899999998763 33445534444
Q ss_pred eecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeee----cccccEeEEEEeeecccccCCCCccceE
Q psy4579 181 VEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFT----GHTAVVEDYSIHRLILGTHTSDEQNHLL 256 (368)
Q Consensus 181 v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~----~~~~~v~~v~~~~~~~~~~~~d~~~~~~ 256 (368)
+. +++|+|+ +.++++++.++.|.+||+.++. ....+. ++...+..++|++. ...++
T Consensus 187 ~~---~~~~s~d-g~~l~~~~~~~~i~~~d~~~~~-------~~~~~~~~~~~~~~~~~~~~~s~d---------g~~l~ 246 (353)
T 3vgz_A 187 ST---GLALDSE-GKRLYTTNADGELITIDTADNK-------ILSRKKLLDDGKEHFFINISLDTA---------RQRAF 246 (353)
T ss_dssp CC---CCEEETT-TTEEEEECTTSEEEEEETTTTE-------EEEEEECCCSSSCCCEEEEEEETT---------TTEEE
T ss_pred cc---eEEECCC-CCEEEEEcCCCeEEEEECCCCe-------EEEEEEcCCCCCCcccceEEECCC---------CCEEE
Confidence 53 9999999 8889999999999999998763 233332 24445667777651 11222
Q ss_pred EEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCC
Q psy4579 257 IASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSK 336 (368)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~ 336 (368)
+.. ...+.+..++..+++....+..++ ...++|+|++..++++...++.|.+||...
T Consensus 247 ~~~----------------~~~~~v~~~d~~~~~~~~~~~~~~---~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~---- 303 (353)
T 3vgz_A 247 ITD----------------SKAAEVLVVDTRNGNILAKVAAPE---SLAVLFNPARNEAYVTHRQAGKVSVIDAKS---- 303 (353)
T ss_dssp EEE----------------SSSSEEEEEETTTCCEEEEEECSS---CCCEEEETTTTEEEEEETTTTEEEEEETTT----
T ss_pred EEe----------------CCCCEEEEEECCCCcEEEEEEcCC---CceEEECCCCCEEEEEECCCCeEEEEECCC----
Confidence 221 112334455555566655554322 256999999977888877899999999964
Q ss_pred CCCCCCCCCceeeecccCceeeecceeee
Q psy4579 337 PDPNGECHPDLRLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 337 ~~~~~~~~~~~~~~gh~~~V~~l~w~p~~ 365 (368)
...+..+. ....+.+++|+|..
T Consensus 304 ------~~~~~~~~-~~~~~~~~~~s~dg 325 (353)
T 3vgz_A 304 ------YKVVKTFD-TPTHPNSLALSADG 325 (353)
T ss_dssp ------TEEEEEEE-CCSEEEEEEECTTS
T ss_pred ------CeEEEEEe-cCCCCCeEEEcCCC
Confidence 22222333 33467889998864
|
| >3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} | Back alignment and structure |
|---|
Probab=99.67 E-value=4.4e-16 Score=137.18 Aligned_cols=273 Identities=10% Similarity=0.076 Sum_probs=149.3
Q ss_pred hhhhhhhhhcCcchheeecccccccCceeeEecCCcccccCCCC-ccccccCcceeeeccc-cCCC-CCcEEEEEEecCC
Q psy4579 17 NEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNE-DAQFDASNYDTDKGTH-TSDE-QNHLLIASVQLPN 93 (368)
Q Consensus 17 ~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~-~~~~~~~~~~~~~~~~-~~~~-~~~~~i~~~~~~~ 93 (368)
+....+|...+..+...+... .. +. .++|+||++++.+++. ++.+ +.|+...+.. .... ........+.+.+
T Consensus 19 ~~~v~~~d~~~~~~~~~~~~~-~~-~~-~~~~s~dg~~l~~~~~~~~~i--~~~d~~~~~~~~~~~~~~~~~~~~~~~s~ 93 (331)
T 3u4y_A 19 LRRISFFSTDTLEILNQITLG-YD-FV-DTAITSDCSNVVVTSDFCQTL--VQIETQLEPPKVVAIQEGQSSMADVDITP 93 (331)
T ss_dssp GTEEEEEETTTCCEEEEEECC-CC-EE-EEEECSSSCEEEEEESTTCEE--EEEECSSSSCEEEEEEECSSCCCCEEECT
T ss_pred CCeEEEEeCcccceeeeEEcc-CC-cc-eEEEcCCCCEEEEEeCCCCeE--EEEECCCCceeEEecccCCCCccceEECC
Confidence 345667777766655444422 22 34 8999999997666544 6666 5555554432 1110 0000111144544
Q ss_pred CccccccCCcccCCCCcccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCCCc-EEEEeCCCCCCCCcccccce
Q psy4579 94 EDAQFDASNYDTDKGGNVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHT-ICLWDINATPKENRVIDAKT 172 (368)
Q Consensus 94 ~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~-v~iwd~~~~~~~~~~~~~~~ 172 (368)
++..+. ........+.|.+|+.+.........+.....+++|+|+|..++++...++. |.+|++........ .. ..
T Consensus 94 dg~~l~-~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~-~~-~~ 170 (331)
T 3u4y_A 94 DDQFAV-TVTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFD-TG-QE 170 (331)
T ss_dssp TSSEEE-ECCCSSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEE-EE-EE
T ss_pred CCCEEE-EecCCCCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEee-cC-Cc
Confidence 444333 2222111228999998764444445555667999999999335555566688 99999985432100 00 12
Q ss_pred eeeccccceecceeeEEeCCCCC-eEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeeecccccCCCC
Q psy4579 173 IFTGHTAVVEVRYGLSWNPSLNG-YLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDE 251 (368)
Q Consensus 173 ~~~~h~~~v~~~~~i~~~p~~~~-~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~ 251 (368)
.+. ...... .++|+|+ ++ +++++..++.|.+||+.++... ..+..+.. ...+..++|+|. +
T Consensus 171 ~~~-~~~~~~---~~~~spd-g~~l~v~~~~~~~v~v~d~~~~~~~----~~~~~~~~-~~~~~~~~~spd--------g 232 (331)
T 3u4y_A 171 FIS-GGTRPF---NITFTPD-GNFAFVANLIGNSIGILETQNPENI----TLLNAVGT-NNLPGTIVVSRD--------G 232 (331)
T ss_dssp EEC-SSSSEE---EEEECTT-SSEEEEEETTTTEEEEEECSSTTSC----EEEEEEEC-SSCCCCEEECTT--------S
T ss_pred ccc-CCCCcc---ceEECCC-CCEEEEEeCCCCeEEEEECCCCccc----ceeeeccC-CCCCceEEECCC--------C
Confidence 222 222343 9999999 66 5566667999999999876320 11333432 345567777651 0
Q ss_pred ccceEEEEeecCCcccccccccccCCCCCcccccCCCCce--eeeeec------CcccceeEEEEeCCCCcEEEEecCCC
Q psy4579 252 QNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKI--EIEIKI------NHEGEVNRARYMPQNPCVIATKTPSS 323 (368)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~--~~~~~~------~h~~~i~~~~~~p~~~~~lasgs~Dg 323 (368)
..+++... ..+.+..++..+++. ...+.. ........++|+|++..+++++..++
T Consensus 233 -~~l~v~~~----------------~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~ 295 (331)
T 3u4y_A 233 -STVYVLTE----------------STVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISR 295 (331)
T ss_dssp -SEEEEECS----------------SEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTT
T ss_pred -CEEEEEEc----------------CCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCC
Confidence 11111110 001122233333333 111110 11122366899999977777777888
Q ss_pred eEEEEECCC
Q psy4579 324 DVLVFDYTK 332 (368)
Q Consensus 324 ~i~iwd~~~ 332 (368)
.|.+||+..
T Consensus 296 ~v~v~d~~~ 304 (331)
T 3u4y_A 296 ELKVFTISG 304 (331)
T ss_dssp EEEEEETTS
T ss_pred cEEEEEecC
Confidence 999999974
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=99.67 E-value=3.1e-16 Score=153.01 Aligned_cols=296 Identities=8% Similarity=0.038 Sum_probs=162.8
Q ss_pred hhhhhhhhcCcchheeeccccc-ccCceeeEecCCcccccCCCCcccc-------ccCcceeeeccc--cCCCCC-cEEE
Q psy4579 18 EEYKIWKKNTPFLYDLVMTHAL-EWPSLTAQWLPDVTSVQLPNEDAQF-------DASNYDTDKGTH--TSDEQN-HLLI 86 (368)
Q Consensus 18 ~~~~~w~~~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~l~~~~~~~~~-------~~~~~~~~~~~~--~~~~~~-~~~i 86 (368)
..+++|+..+......+..+.. ...+.+++|+|||++|++++.++.+ .++.|++..+.. ...... ...+
T Consensus 37 g~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~ 116 (723)
T 1xfd_A 37 GTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKL 116 (723)
T ss_dssp SCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCC
T ss_pred CCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccc
Confidence 3677888877765544443322 1247899999999999998765432 124555554432 111111 1124
Q ss_pred EEEecCCCccccccCCcccCCCCcccCCCCCeeeeecc-ccCCCC------------------ceeeEecCCCCCeeEEE
Q psy4579 87 ASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQFDASN-YDTDKG------------------GYGLSWNPSLNGYLLSA 147 (368)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~-~~h~~~------------------v~~l~~sp~~~~~lasg 147 (368)
..+.|++++..+.... ++.|.+|+..+.....+ ..+... +.+++|+|+| +.||.+
T Consensus 117 ~~~~~SPdG~~la~~~-----~~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg-~~la~~ 190 (723)
T 1xfd_A 117 QYAGWGPKGQQLIFIF-----ENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDG-TRLAYA 190 (723)
T ss_dssp SBCCBCSSTTCEEEEE-----TTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTS-SEEEEE
T ss_pred cccEECCCCCEEEEEE-----CCeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCC-CEEEEE
Confidence 4555655554433222 36899999875333222 223333 3789999999 889888
Q ss_pred eCCC----------------------------------cEEEEeCCCCCCCCcccccceeeec------cccceecceee
Q psy4579 148 SDDH----------------------------------TICLWDINATPKENRVIDAKTIFTG------HTAVVEVRYGL 187 (368)
Q Consensus 148 ~~dg----------------------------------~v~iwd~~~~~~~~~~~~~~~~~~~------h~~~v~~~~~i 187 (368)
+.|+ .|++||+.++.. ...+.. +...+. .+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~-------~~~l~~~~~~~~~~~~~~---~~ 260 (723)
T 1xfd_A 191 AINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTH-------DLEMMPPDDPRMREYYIT---MV 260 (723)
T ss_dssp EEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCC-------CEECCCCCCGGGSSEEEE---EE
T ss_pred EECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCce-------eEEeeCCccCCCccceeE---EE
Confidence 7553 789999987642 233333 355664 89
Q ss_pred EEeCCCCCeEEEeeC----CCcEEEEECCCCCCCCccccceeeeec-ccccEe----EEEEeeecccccCCCCccceEEE
Q psy4579 188 SWNPSLNGYLLSASD----DHTICLWDINATPKENRVIDAKTIFTG-HTAVVE----DYSIHRLILGTHTSDEQNHLLIA 258 (368)
Q Consensus 188 ~~~p~~~~~l~s~s~----dg~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~v~----~v~~~~~~~~~~~~d~~~~~~~~ 258 (368)
+|+|+ +.++++.+. +..|.+||+.++. ....+.. +...+. .++|+| |+ ..+...
T Consensus 261 ~~SpD-g~~l~~~~~~~~~~~~i~~~d~~~g~-------~~~~~~~~~~~~~~~~~~~~~~sp--------dg-~~l~~~ 323 (723)
T 1xfd_A 261 KWATS-TKVAVTWLNRAQNVSILTLCDATTGV-------CTKKHEDESEAWLHRQNEEPVFSK--------DG-RKFFFI 323 (723)
T ss_dssp EESSS-SEEEEEEEETTSCEEEEEEEETTTCC-------EEEEEEEECSSCCCCCCCCCEECT--------TS-CSEEEE
T ss_pred EEeCC-CeEEEEEEcCCCCeEEEEEEeCCCCc-------ceEEEEeccCCEEeccCCCceEcC--------CC-CeEEEE
Confidence 99999 778876643 3579999998763 2223322 223332 566664 11 111111
Q ss_pred EeecCCc-ccccccccccCCCCCccccc-CCCCc--eeeeeecCcccceeE-EEEeCCCCcEEEEecCC--CeEEEEECC
Q psy4579 259 SVQLPNE-DAQFDASNYDTDKGDFGGFG-SVSGK--IEIEIKINHEGEVNR-ARYMPQNPCVIATKTPS--SDVLVFDYT 331 (368)
Q Consensus 259 ~~~~~~~-~~~~~~~~~d~~~~~~~~~~-~~~~~--~~~~~~~~h~~~i~~-~~~~p~~~~~lasgs~D--g~i~iwd~~ 331 (368)
....... .... .+..++ ...+. ....+. .+...+.. ++|+|++..++.++..+ +.++||++.
T Consensus 324 ~~~~~~~~~~~~----------~l~~~d~~~~~~~~~~~~l~-~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~ 392 (723)
T 1xfd_A 324 RAIPQGGRGKFY----------HITVSSSQPNSSNDNIQSIT-SGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSAN 392 (723)
T ss_dssp EEECCSSSSCEE----------EEEEECSSCCSSSCCCCBSC-CSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEEC
T ss_pred EecccCCCccee----------EEEEEeccCCCCccceeEee-cCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEe
Confidence 0000000 0000 112222 11111 012222 23344444 69999996665566665 889999987
Q ss_pred CCCCCCCCCCCCCCceeeec---ccCceeeecceeee
Q psy4579 332 KHPSKPDPNGECHPDLRLRG---HQKEGLIEGTYNCY 365 (368)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~g---h~~~V~~l~w~p~~ 365 (368)
... ......+.+ |...+..++|+|..
T Consensus 393 ~~~--------~~~~~~l~~~~~~~~~~~~~~~spdg 421 (723)
T 1xfd_A 393 TVG--------NFNRQCLSCDLVENCTYFSASFSHSM 421 (723)
T ss_dssp SST--------TCCCBCSSTTSSSSCCCCEEEECTTS
T ss_pred CCC--------CCCcceecccccCCCCeEEEEECCCC
Confidence 421 111122332 67778889998863
|
| >1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=2.3e-15 Score=141.58 Aligned_cols=267 Identities=9% Similarity=0.057 Sum_probs=168.3
Q ss_pred eEecCCcccccCCCCccccccCcceeeeccccCCCC-CcEEEEEEecCCCccccccCCcccCCCCcccCCCC--Ceeeee
Q psy4579 46 AQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQ-NHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNE--DAQFDA 122 (368)
Q Consensus 46 ~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~--~~~~~~ 122 (368)
..++|++..+++++.++.+.+| +...+....... .+. +..+.+.++...+.... .++.|.+||. ......
T Consensus 143 ~~~~p~~~~~vs~~~d~~V~v~--D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~----~d~~V~v~D~~~~t~~~~ 215 (543)
T 1nir_A 143 NDLDLPNLFSVTLRDAGQIALV--DGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIG----RDARIDMIDLWAKEPTKV 215 (543)
T ss_dssp SCCCGGGEEEEEEGGGTEEEEE--ETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEE----TTSEEEEEETTSSSCEEE
T ss_pred cccCCCCEEEEEEcCCCeEEEE--ECCCceEEEEEecCcc-cceEEECCCCCEEEEEC----CCCeEEEEECcCCCCcEE
Confidence 3488999999999999988555 444443322211 111 45666655554444333 4699999998 443333
Q ss_pred ccccCCCCceeeEecC----CCCCeeEEEe-CCCcEEEEeCCCCCCCCcccccceeeec----------ccc-ceeccee
Q psy4579 123 SNYDTDKGGYGLSWNP----SLNGYLLSAS-DDHTICLWDINATPKENRVIDAKTIFTG----------HTA-VVEVRYG 186 (368)
Q Consensus 123 ~~~~h~~~v~~l~~sp----~~~~~lasg~-~dg~v~iwd~~~~~~~~~~~~~~~~~~~----------h~~-~v~~~~~ 186 (368)
....+...+..++|+| +| +++++++ .+++|.+||..+.+ ++..+.. |.. .+. +
T Consensus 216 ~~i~~g~~p~~va~sp~~~~dg-~~l~v~~~~~~~v~v~D~~t~~-------~~~~i~~~g~~~~~~~~~~~~~v~---~ 284 (543)
T 1nir_A 216 AEIKIGIEARSVESSKFKGYED-RYTIAGAYWPPQFAIMDGETLE-------PKQIVSTRGMTVDTQTYHPEPRVA---A 284 (543)
T ss_dssp EEEECCSEEEEEEECCSTTCTT-TEEEEEEEESSEEEEEETTTCC-------EEEEEECCEECSSSCCEESCCCEE---E
T ss_pred EEEecCCCcceEEeCCCcCCCC-CEEEEEEccCCeEEEEeccccc-------cceeecccCcccCccccccCCceE---E
Confidence 3344666789999999 99 8888887 58999999998764 3444443 222 453 8
Q ss_pred eEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeeecccccCCCCccceEEEEeecCCcc
Q psy4579 187 LSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNED 266 (368)
Q Consensus 187 i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 266 (368)
+.++|++..++++...+++|.+||+.+.... ....+ .+...+..+.|+|. ..++++..
T Consensus 285 i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l-----~~~~i-~~~~~~~~~~~spd---------g~~l~va~------- 342 (543)
T 1nir_A 285 IIASHEHPEFIVNVKETGKVLLVNYKDIDNL-----TVTSI-GAAPFLHDGGWDSS---------HRYFMTAA------- 342 (543)
T ss_dssp EEECSSSSEEEEEETTTTEEEEEECTTSSSC-----EEEEE-ECCSSCCCEEECTT---------SCEEEEEE-------
T ss_pred EEECCCCCEEEEEECCCCeEEEEEecCCCcc-----eeEEe-ccCcCccCceECCC---------CCEEEEEe-------
Confidence 9999986777888899999999999875321 01122 24455666777641 01111111
Q ss_pred cccccccccCCCCCcccccCCCCceeeeeec---CcccceeEEEEeCCCCcEEEEec-CCCeEEEEECCCCCCCCCCCCC
Q psy4579 267 AQFDASNYDTDKGDFGGFGSVSGKIEIEIKI---NHEGEVNRARYMPQNPCVIATKT-PSSDVLVFDYTKHPSKPDPNGE 342 (368)
Q Consensus 267 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~---~h~~~i~~~~~~p~~~~~lasgs-~Dg~i~iwd~~~~~~~~~~~~~ 342 (368)
. ..+.+.+||..++++...+.. .|.+....+ ++|++..+++|++ .|++|.+||....... ...
T Consensus 343 -------~--~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~---~~~ 409 (543)
T 1nir_A 343 -------N--NSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHP---QYA 409 (543)
T ss_dssp -------G--GGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCT---TTB
T ss_pred -------c--CCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCc---hhc
Confidence 0 112244455556666555543 266544443 5788547888876 6899999999752111 111
Q ss_pred CCCceeeecccCceeeecceeee
Q psy4579 343 CHPDLRLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 343 ~~~~~~~~gh~~~V~~l~w~p~~ 365 (368)
...+..+.+|.+.+..+++||+-
T Consensus 410 ~~~v~~l~~~g~~~~~v~~~pdg 432 (543)
T 1nir_A 410 WKKVAELQGQGGGSLFIKTHPKS 432 (543)
T ss_dssp TSEEEEEECSCSCCCCEECCTTC
T ss_pred CeEEEEEEcCCCCceEEEcCCCC
Confidence 34556788898888999999875
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=1.3e-15 Score=148.22 Aligned_cols=259 Identities=14% Similarity=0.124 Sum_probs=148.9
Q ss_pred cCceeeEecCCcccccCCCCccccccCcceeeeccccCCCCCcEEEEEEecCCCccccccCCcccCCCCcccCCCCCe--
Q psy4579 41 WPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDA-- 118 (368)
Q Consensus 41 ~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~-- 118 (368)
.++.+++|+|| ..++++ .++.+ +.|++..+...........+..+.|.+++..+... .++.|.+|+..+
T Consensus 82 ~~v~~~~~spd-~~~~~~-~~~~i--~~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~-----~~~~i~v~~~~~~~ 152 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLF-TQGGL--VGFDMLARKVTYLFDTNEETASLDFSPVGDRVAYV-----RNHNLYIARGGKLG 152 (706)
T ss_dssp CCCEEEEETTT-TEEEEE-ETTEE--EEEETTTTEEEEEECCTTCCTTCEECTTSSEEEEE-----ETTEEEEEECBCTT
T ss_pred cCceeEEECCC-CeEEEE-ECCEE--EEEECCCCceEEccCCcccccCCcCCCCCCEEEEE-----ECCeEEEEecCccc
Confidence 47889999999 666555 34666 44454433221110000113344555544443332 368899999875
Q ss_pred ---eeeec-cccCCCC--------------ceeeEecCCCCCeeEEEe--------------------------------
Q psy4579 119 ---QFDAS-NYDTDKG--------------GYGLSWNPSLNGYLLSAS-------------------------------- 148 (368)
Q Consensus 119 ---~~~~~-~~~h~~~--------------v~~l~~sp~~~~~lasg~-------------------------------- 148 (368)
..... ...+... +.++.|+|+| +.|++++
T Consensus 153 ~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg-~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~ 231 (706)
T 2z3z_A 153 EGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKG-SCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTP 231 (706)
T ss_dssp SCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTS-SEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSC
T ss_pred ccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCC-CEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCC
Confidence 33332 2222222 5899999999 8999887
Q ss_pred -CCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCC-----cEEEEECCCCCCCCcccc
Q psy4579 149 -DDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDH-----TICLWDINATPKENRVID 222 (368)
Q Consensus 149 -~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg-----~i~iwd~~~~~~~~~~~~ 222 (368)
.+..|++||+.++... .......|...+. +++|+|+ ++.|++++.++ .|.+||+.++..
T Consensus 232 ~~~~~l~~~d~~~~~~~-----~~~~~~~~~~~~~---~~~~spd-g~~l~~~~~~~~~~~~~v~~~d~~~g~~------ 296 (706)
T 2z3z_A 232 SHHVTVGIYHLATGKTV-----YLQTGEPKEKFLT---NLSWSPD-ENILYVAEVNRAQNECKVNAYDAETGRF------ 296 (706)
T ss_dssp CCEEEEEEEETTTTEEE-----ECCCCSCTTCEEE---EEEECTT-SSEEEEEEECTTSCEEEEEEEETTTCCE------
T ss_pred CCeeEEEEEECCCCceE-----eeccCCCCceeEe---eEEEECC-CCEEEEEEeCCCCCeeEEEEEECCCCce------
Confidence 4467999999876311 0111124566674 9999999 88888887776 899999987621
Q ss_pred ceeeee--cccc---cEeEEEEee----ecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceee
Q psy4579 223 AKTIFT--GHTA---VVEDYSIHR----LILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEI 293 (368)
Q Consensus 223 ~~~~~~--~~~~---~v~~v~~~~----~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 293 (368)
...+. .+.. .+..++|++ .++.++..++...+|... . .+....
T Consensus 297 -~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~--------------------------~-~~~~~~ 348 (706)
T 2z3z_A 297 -VRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYD--------------------------T-TGRLIR 348 (706)
T ss_dssp -EEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEE--------------------------T-TSCEEE
T ss_pred -eeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEE--------------------------C-CCCEEE
Confidence 11111 1111 124455643 112222222222222221 0 233333
Q ss_pred eeecCcccceeE-EEEeCCCCcEEEEecCCC----eEEEEECCCCCCCCCCCCCCCCceeeecccCceeeecceeee
Q psy4579 294 EIKINHEGEVNR-ARYMPQNPCVIATKTPSS----DVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 294 ~~~~~h~~~i~~-~~~~p~~~~~lasgs~Dg----~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p~~ 365 (368)
.+. .|...+.. ++|+|++..++++++.++ .|..||+.. .. ...+ .|...+.+++|+|+.
T Consensus 349 ~l~-~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~----------~~-~~~l-~~~~~~~~~~~spdg 412 (706)
T 2z3z_A 349 QVT-KGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKG----------GK-TKDL-TPESGMHRTQLSPDG 412 (706)
T ss_dssp ECC-CSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTC----------CC-CEES-CCSSSEEEEEECTTS
T ss_pred ecC-CCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCC----------CC-ceec-cCCCceEEEEECCCC
Confidence 333 56777876 799999977777777766 566666643 11 1222 367778899999864
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=99.64 E-value=5.5e-16 Score=147.58 Aligned_cols=235 Identities=10% Similarity=0.050 Sum_probs=145.1
Q ss_pred cccCceeeEecCCcccccCCCC-ccccccCcceeeeccccCCCCCc-EEEEEEecCCCccccccCCcccCCCCcccCC--
Q psy4579 39 LEWPSLTAQWLPDVTSVQLPNE-DAQFDASNYDTDKGTHTSDEQNH-LLIASVQLPNEDAQFDASNYDTDKGGNVQLP-- 114 (368)
Q Consensus 39 ~~~~~~~~~~~p~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~-- 114 (368)
...|+.+++|+|||++||+++. +|.+.+|.. ..|....-.... ..+..+.|.++ ++........++....+|
T Consensus 20 ~~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~--~~g~~~~lt~~~~~~~~~~~~spd--~~l~~~~~~~g~~~~~l~~~ 95 (582)
T 3o4h_A 20 IAVEKYSLQGVVDGDKLLVVGFSEGSVNAYLY--DGGETVKLNREPINSVLDPHYGVG--RVILVRDVSKGAEQHALFKV 95 (582)
T ss_dssp HHSCEEEEEEEETTTEEEEEEEETTEEEEEEE--ETTEEEECCSSCCSEECEECTTCS--EEEEEEECSTTSCCEEEEEE
T ss_pred hccchheeecCCCCCeEEEEEccCCceeEEEE--cCCCcEeeecccccccccccCCCC--eEEEEeccCCCCcceEEEEE
Confidence 3568999999999999999877 888877763 333322211222 35667777654 333222111123334443
Q ss_pred CC--CeeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCC
Q psy4579 115 NE--DAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPS 192 (368)
Q Consensus 115 ~~--~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~ 192 (368)
+. ++... .+. ....+...+|+|++...+++.+.++.+.+||+.++. ...+..+.. . +++|+|+
T Consensus 96 ~~~~~g~~~-~l~-~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~--------~~~l~~~~~--~---~~~~spD 160 (582)
T 3o4h_A 96 NTSRPGEEQ-RLE-AVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGG--------LRELARLPG--F---GFVSDIR 160 (582)
T ss_dssp ETTSTTCCE-ECT-TSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTE--------EEEEEEESS--C---EEEEEEE
T ss_pred eccCCCccc-ccc-CCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCc--------EEEeecCCC--c---eEEECCC
Confidence 33 33222 222 222345678888874444444444555599998763 223333333 2 8999999
Q ss_pred CCCeEEEeeCC----CcEEEEECCCCCCCCccccceeeeecccccEeEEEEeee--cccccCCCCccceEEEEeecCCcc
Q psy4579 193 LNGYLLSASDD----HTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRL--ILGTHTSDEQNHLLIASVQLPNED 266 (368)
Q Consensus 193 ~~~~l~s~s~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~--~~~~~~~d~~~~~~~~~~~~~~~~ 266 (368)
+.+|++++.| +.|.+||+.++. ...+..|...+..++|+|. .+.+...++..
T Consensus 161 -G~~la~~~~~~~~~~~i~~~d~~~g~--------~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~------------- 218 (582)
T 3o4h_A 161 -GDLIAGLGFFGGGRVSLFTSNLSSGG--------LRVFDSGEGSFSSASISPGMKVTAGLETAREA------------- 218 (582)
T ss_dssp -TTEEEEEEEEETTEEEEEEEETTTCC--------CEEECCSSCEEEEEEECTTSCEEEEEECSSCE-------------
T ss_pred -CCEEEEEEEcCCCCeEEEEEcCCCCC--------ceEeecCCCccccceECCCCCEEEEccCCCee-------------
Confidence 9999988877 789999998763 2456678888899999861 11111111111
Q ss_pred cccccccccCCCCCcccccCCCCceeeeeecCcccceeEEE--------EeCCCCcEEEEecCCCeEEEEEC
Q psy4579 267 AQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRAR--------YMPQNPCVIATKTPSSDVLVFDY 330 (368)
Q Consensus 267 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~--------~~p~~~~~lasgs~Dg~i~iwd~ 330 (368)
.+..|+..+++.. .+ .+|...+..++ |+|+| .++++++.|+++++|++
T Consensus 219 -------------~i~~~d~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~spdg-~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 219 -------------RLVTVDPRDGSVE-DL-ELPSKDFSSYRPTAITWLGYLPDG-RLAVVARREGRSAVFID 274 (582)
T ss_dssp -------------EEEEECTTTCCEE-EC-CCSCSHHHHHCCSEEEEEEECTTS-CEEEEEEETTEEEEEET
T ss_pred -------------EEEEEcCCCCcEE-Ec-cCCCcChhhhhhccccceeEcCCC-cEEEEEEcCCcEEEEEE
Confidence 2334444455554 33 36777777777 99999 89999999999999998
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=1.1e-15 Score=148.83 Aligned_cols=261 Identities=11% Similarity=0.102 Sum_probs=156.9
Q ss_pred eeeEecCCcccccCCCCccccccCcceeeecccc--CC-CCC----------------cEEEEEEecCCCccccccCCcc
Q psy4579 44 LTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHT--SD-EQN----------------HLLIASVQLPNEDAQFDASNYD 104 (368)
Q Consensus 44 ~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~-~~~----------------~~~i~~~~~~~~~~~~~~~~~~ 104 (368)
..++|+ ++.+++++.++ + .|+...|... .- ... ...+..+.+.++ ..+..+.
T Consensus 29 ~~~~w~--g~~~~~~~~~~-i---~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~~-- 99 (706)
T 2z3z_A 29 VGLQWM--GDNYVFIEGDD-L---VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLFT-- 99 (706)
T ss_dssp TTCEEE--TTEEEEEETTE-E---EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEEE--
T ss_pred CCCcCc--CCeEEEEeCCc-E---EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEEE--
Confidence 347888 55666666666 3 5566655441 10 000 024677778665 4444332
Q ss_pred cCCCCcccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCC-----CCCCCcccccceeeecccc
Q psy4579 105 TDKGGNVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINA-----TPKENRVIDAKTIFTGHTA 179 (368)
Q Consensus 105 ~~~~g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~-----~~~~~~~~~~~~~~~~h~~ 179 (368)
++.+.+|+..+.....+..+...+.+++|+|+| +.||.+ .|+.|++||+.+ +.. ......+..
T Consensus 100 ---~~~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG-~~la~~-~~~~i~v~~~~~~~~~~g~~-------~~~~~~~~~ 167 (706)
T 2z3z_A 100 ---QGGLVGFDMLARKVTYLFDTNEETASLDFSPVG-DRVAYV-RNHNLYIARGGKLGEGMSRA-------IAVTIDGTE 167 (706)
T ss_dssp ---TTEEEEEETTTTEEEEEECCTTCCTTCEECTTS-SEEEEE-ETTEEEEEECBCTTSCCCCC-------EESCSCCBT
T ss_pred ---CCEEEEEECCCCceEEccCCcccccCCcCCCCC-CEEEEE-ECCeEEEEecCcccccCCCc-------EEeccCCCC
Confidence 589999999876666666778889999999999 888885 689999999987 532 122222222
Q ss_pred c--------------eecceeeEEeCCCCCeEEEee---------------------------------CCCcEEEEECC
Q psy4579 180 V--------------VEVRYGLSWNPSLNGYLLSAS---------------------------------DDHTICLWDIN 212 (368)
Q Consensus 180 ~--------------v~~~~~i~~~p~~~~~l~s~s---------------------------------~dg~i~iwd~~ 212 (368)
. +. ++.|+|+ +.+|++++ .+..|.+||+.
T Consensus 168 ~~~~g~~~~~ee~~~~~---~~~~SpD-g~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~ 243 (706)
T 2z3z_A 168 TLVYGQAVHQREFGIEK---GTFWSPK-GSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLA 243 (706)
T ss_dssp TEEESSCCGGGCTTCCC---SEEECTT-SSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETT
T ss_pred CeEcccchhhhhcCCCc---eEEECCC-CCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECC
Confidence 1 33 8999999 89999887 45689999998
Q ss_pred CCCCCCccccceeeeecccccEeEEEEeeecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCcee
Q psy4579 213 ATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIE 292 (368)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 292 (368)
++... .+.....|...+..++|+|. + ..+..... ....... .+..|+..+++..
T Consensus 244 ~~~~~-----~~~~~~~~~~~~~~~~~spd--------g-~~l~~~~~--~~~~~~~----------~v~~~d~~~g~~~ 297 (706)
T 2z3z_A 244 TGKTV-----YLQTGEPKEKFLTNLSWSPD--------E-NILYVAEV--NRAQNEC----------KVNAYDAETGRFV 297 (706)
T ss_dssp TTEEE-----ECCCCSCTTCEEEEEEECTT--------S-SEEEEEEE--CTTSCEE----------EEEEEETTTCCEE
T ss_pred CCceE-----eeccCCCCceeEeeEEEECC--------C-CEEEEEEe--CCCCCee----------EEEEEECCCCcee
Confidence 76310 11111246677889999761 1 11211111 0111111 2333444444222
Q ss_pred eeee-cCccc---ceeEEEEeC--CCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeecccCceee-ecceeee
Q psy4579 293 IEIK-INHEG---EVNRARYMP--QNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLI-EGTYNCY 365 (368)
Q Consensus 293 ~~~~-~~h~~---~i~~~~~~p--~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~-l~w~p~~ 365 (368)
..+. ..+.. .+.+++|+| ++ .++++++.||.++||++... ......+.+|...+.+ ++|+|..
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~sp~~dg-~~l~~~~~~g~~~l~~~~~~---------~~~~~~l~~~~~~v~~~~~~spdg 367 (706)
T 2z3z_A 298 RTLFVETDKHYVEPLHPLTFLPGSNN-QFIWQSRRDGWNHLYLYDTT---------GRLIRQVTKGEWEVTNFAGFDPKG 367 (706)
T ss_dssp EEEEEEECSSCCCCCSCCEECTTCSS-EEEEEECTTSSCEEEEEETT---------SCEEEECCCSSSCEEEEEEECTTS
T ss_pred eEEEEccCCCeECccCCceeecCCCC-EEEEEEccCCccEEEEEECC---------CCEEEecCCCCeEEEeeeEEcCCC
Confidence 2221 12222 347789999 99 58888899999999998621 2333456677777876 7898864
|
| >1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=1.8e-14 Score=146.23 Aligned_cols=172 Identities=9% Similarity=0.040 Sum_probs=123.1
Q ss_pred CceeeEec-CCcccccCCCCccccccCcceeeeccccCC-CCCcEEEEEEecCCCccccccCCcccCCCCccc-CCCCCe
Q psy4579 42 PSLTAQWL-PDVTSVQLPNEDAQFDASNYDTDKGTHTSD-EQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQ-LPNEDA 118 (368)
Q Consensus 42 ~~~~~~~~-p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~-i~~~~~ 118 (368)
.+.+++|+ |||++|++++ ++.+ +.++...+..... ......+..+.|. ++..+.... .++.+. +|+..+
T Consensus 297 ~v~~~~~S~pdG~~la~~~-~~~i--~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s----~~~~l~~~~d~~~ 368 (1045)
T 1k32_A 297 SKFAEDFSPLDGDLIAFVS-RGQA--FIQDVSGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGT----REGDFLGIYDYRT 368 (1045)
T ss_dssp GGGEEEEEECGGGCEEEEE-TTEE--EEECTTSSBEEECSCCSCEEEEEECSS-SEEEEEEEE----TTEEEEEEEETTT
T ss_pred ccceeeecCCCCCEEEEEE-cCEE--EEEcCCCCceEEccCCCcceEEeeeEc-CCCeEEEEE----CCCceEEEEECCC
Confidence 57889999 9999999877 4555 4444433322111 2222256677777 444333222 255677 778776
Q ss_pred eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEE
Q psy4579 119 QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLL 198 (368)
Q Consensus 119 ~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~ 198 (368)
.....+.+|...+.+++|+|+| +.||+++.++.|++||+.++. ....+.+|.+.+. +++|+|+ +.+|+
T Consensus 369 ~~~~~l~~~~~~~~~~~~SpDG-~~la~~~~~~~v~~~d~~tg~-------~~~~~~~~~~~v~---~~~~SpD-G~~la 436 (1045)
T 1k32_A 369 GKAEKFEENLGNVFAMGVDRNG-KFAVVANDRFEIMTVDLETGK-------PTVIERSREAMIT---DFTISDN-SRFIA 436 (1045)
T ss_dssp CCEEECCCCCCSEEEEEECTTS-SEEEEEETTSEEEEEETTTCC-------EEEEEECSSSCCC---CEEECTT-SCEEE
T ss_pred CCceEecCCccceeeeEECCCC-CEEEEECCCCeEEEEECCCCc-------eEEeccCCCCCcc---ceEECCC-CCeEE
Confidence 5544555788899999999999 999999999999999998764 3345557888885 9999999 88888
Q ss_pred EeeCCC----------cEEEEECCCCCCCCccccceeeeecccccEeEEEEee
Q psy4579 199 SASDDH----------TICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR 241 (368)
Q Consensus 199 s~s~dg----------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~ 241 (368)
+++.++ .|++||+.++. ...+..|...+..++|++
T Consensus 437 ~~~~~~~~~~~~~~~~~i~l~d~~~g~--------~~~l~~~~~~~~~~~~sp 481 (1045)
T 1k32_A 437 YGFPLKHGETDGYVMQAIHVYDMEGRK--------IFAATTENSHDYAPAFDA 481 (1045)
T ss_dssp EEEEECSSTTCSCCEEEEEEEETTTTE--------EEECSCSSSBEEEEEECT
T ss_pred EEecCccccccCCCCCeEEEEECCCCc--------EEEeeCCCcccCCceEcC
Confidence 887654 89999998752 345666777788888875
|
| >1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=3.7e-15 Score=151.24 Aligned_cols=255 Identities=10% Similarity=0.018 Sum_probs=168.3
Q ss_pred cccCceeeEecCCcccccCCCCccccccCcceeeeccc-cCCCCCcEEEEEEecCCCccccccCCcccCCCCcccCCCCC
Q psy4579 39 LEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTH-TSDEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNED 117 (368)
Q Consensus 39 ~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~ 117 (368)
+...+.++.|+|+ ..+.+++.++.+.+|.++...+.. ....... +....|.+++..+... .++.|.+|+.+
T Consensus 202 ~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~~--~~~~~~SpDG~~la~~-----~~~~i~~~d~~ 273 (1045)
T 1k32_A 202 MSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRKHTSFTD--YYPRHLNTDGRRILFS-----KGGSIYIFNPD 273 (1045)
T ss_dssp CSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEECCCCCS--SCEEEEEESSSCEEEE-----ETTEEEEECTT
T ss_pred CCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceEecCCCC--cceeeEcCCCCEEEEE-----eCCEEEEecCC
Confidence 4567888999998 666667777887777665433211 1111111 1122443333333222 37889999875
Q ss_pred eeeeecccc-----------CCCCceeeEec-CCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeecccc-ceecc
Q psy4579 118 AQFDASNYD-----------TDKGGYGLSWN-PSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTA-VVEVR 184 (368)
Q Consensus 118 ~~~~~~~~~-----------h~~~v~~l~~s-p~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~-~v~~~ 184 (368)
+..+..+.. |...+.+++|+ |+| +.||.++ ++.|.+|++..+. ...+..|.. .+.
T Consensus 274 ~~~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG-~~la~~~-~~~i~~~~~~~~~--------~~~~~~~~~~~~~-- 341 (1045)
T 1k32_A 274 TEKIEKIEIGDLESPEDRIISIPSKFAEDFSPLDG-DLIAFVS-RGQAFIQDVSGTY--------VLKVPEPLRIRYV-- 341 (1045)
T ss_dssp TCCEEECCCCCCCBCCSEEEECGGGGEEEEEECGG-GCEEEEE-TTEEEEECTTSSB--------EEECSCCSCEEEE--
T ss_pred ceEeeeeccCcccccccccccccccceeeecCCCC-CEEEEEE-cCEEEEEcCCCCc--------eEEccCCCcceEE--
Confidence 443333332 44579999999 999 8888887 8899999987652 344566666 664
Q ss_pred eeeEEeCCCCCeEEEeeCCCcEE-EEECCCCCCCCccccceeeeecccccEeEEEEeee--cccccCCCCccceEEEEee
Q psy4579 185 YGLSWNPSLNGYLLSASDDHTIC-LWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRL--ILGTHTSDEQNHLLIASVQ 261 (368)
Q Consensus 185 ~~i~~~p~~~~~l~s~s~dg~i~-iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~--~~~~~~~d~~~~~~~~~~~ 261 (368)
.++|+ + +..|++++.++.+. +||+.++. ...+.+|...+..++|+|. .++.++.
T Consensus 342 -~~~~s-d-g~~l~~~s~~~~l~~~~d~~~~~--------~~~l~~~~~~~~~~~~SpDG~~la~~~~------------ 398 (1045)
T 1k32_A 342 -RRGGD-T-KVAFIHGTREGDFLGIYDYRTGK--------AEKFEENLGNVFAMGVDRNGKFAVVAND------------ 398 (1045)
T ss_dssp -EECSS-S-EEEEEEEETTEEEEEEEETTTCC--------EEECCCCCCSEEEEEECTTSSEEEEEET------------
T ss_pred -eeeEc-C-CCeEEEEECCCceEEEEECCCCC--------ceEecCCccceeeeEECCCCCEEEEECC------------
Confidence 99999 7 88899998888888 99987652 2333467778888999761 1111111
Q ss_pred cCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCC----------CeEEEEECC
Q psy4579 262 LPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPS----------SDVLVFDYT 331 (368)
Q Consensus 262 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~D----------g~i~iwd~~ 331 (368)
.+.+.+|+..+++...... +|.+.+.+++|+|+|. .|++++.+ +.|++||+.
T Consensus 399 ----------------~~~v~~~d~~tg~~~~~~~-~~~~~v~~~~~SpDG~-~la~~~~~~~~~~~~~~~~~i~l~d~~ 460 (1045)
T 1k32_A 399 ----------------RFEIMTVDLETGKPTVIER-SREAMITDFTISDNSR-FIAYGFPLKHGETDGYVMQAIHVYDME 460 (1045)
T ss_dssp ----------------TSEEEEEETTTCCEEEEEE-CSSSCCCCEEECTTSC-EEEEEEEECSSTTCSCCEEEEEEEETT
T ss_pred ----------------CCeEEEEECCCCceEEecc-CCCCCccceEECCCCC-eEEEEecCccccccCCCCCeEEEEECC
Confidence 1234455555566554443 7889999999999995 55565554 499999997
Q ss_pred CCCCCCCCCCCCCCceeeecccCceeeecceeee
Q psy4579 332 KHPSKPDPNGECHPDLRLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p~~ 365 (368)
. .. ...+.+|...+.+++|+|+.
T Consensus 461 ~----------g~-~~~l~~~~~~~~~~~~spdG 483 (1045)
T 1k32_A 461 G----------RK-IFAATTENSHDYAPAFDADS 483 (1045)
T ss_dssp T----------TE-EEECSCSSSBEEEEEECTTS
T ss_pred C----------Cc-EEEeeCCCcccCCceEcCCC
Confidence 4 12 45677888889999999864
|
| >1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 | Back alignment and structure |
|---|
Probab=99.57 E-value=1.1e-14 Score=128.53 Aligned_cols=228 Identities=11% Similarity=0.051 Sum_probs=126.3
Q ss_pred EEecCCCccccccCCcccCCCCcccCCCCC--e-e-eeeccccCCCCceeeEecCCCCCeeEEEe-CCCcEEEEeCCCCC
Q psy4579 88 SVQLPNEDAQFDASNYDTDKGGNVQLPNED--A-Q-FDASNYDTDKGGYGLSWNPSLNGYLLSAS-DDHTICLWDINATP 162 (368)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~--~-~-~~~~~~~h~~~v~~l~~sp~~~~~lasg~-~dg~v~iwd~~~~~ 162 (368)
.+.+.+.+..+.... ..++.|.+|+.+ + . ...........+.+++|+|++ +.|++++ .++.|.+||+..+.
T Consensus 42 ~~~~spdg~~l~~~~---~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~~i~~~d~~~~~ 117 (343)
T 1ri6_A 42 PMVVSPDKRYLYVGV---RPEFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQG-QFVFVGSYNAGNVSVTRLEDGL 117 (343)
T ss_dssp CEEECTTSSEEEEEE---TTTTEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTS-SEEEEEETTTTEEEEEEEETTE
T ss_pred eEEECCCCCEEEEee---cCCCeEEEEEecCCCCceeeccccccCCCCcEEEEcCCC-CEEEEEecCCCeEEEEECCCCc
Confidence 344544444333332 124899999875 2 2 122222233488999999999 7665554 58999999995221
Q ss_pred CCCcccccceeeeccccceecceeeEEeCCCCCeEEEee-CCCcEEEEECCCCCCCCcccccee--eeec-ccccEeEEE
Q psy4579 163 KENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSAS-DDHTICLWDINATPKENRVIDAKT--IFTG-HTAVVEDYS 238 (368)
Q Consensus 163 ~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s-~dg~i~iwd~~~~~~~~~~~~~~~--~~~~-~~~~v~~v~ 238 (368)
. ......+..+.. +. +++|+|+ +.++++++ .++.|.+||+.+.... .... .+.. ....+..++
T Consensus 118 ~----~~~~~~~~~~~~-~~---~~~~s~d-g~~l~~~~~~~~~v~~~d~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 184 (343)
T 1ri6_A 118 P----VGVVDVVEGLDG-CH---SANISPD-NRTLWVPALKQDRICLFTVSDDGHL----VAQDPAEVTTVEGAGPRHMV 184 (343)
T ss_dssp E----EEEEEEECCCTT-BC---CCEECTT-SSEEEEEEGGGTEEEEEEECTTSCE----EEEEEEEEECSTTCCEEEEE
T ss_pred c----ccccccccCCCC-ce---EEEECCC-CCEEEEecCCCCEEEEEEecCCCce----eeecccccccCCCCCcceEE
Confidence 1 113344444443 43 8999999 77777666 8999999999762211 1111 1222 234567788
Q ss_pred Eee---ecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCcee--ee---eecCc--ccceeEEEE
Q psy4579 239 IHR---LILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIE--IE---IKINH--EGEVNRARY 308 (368)
Q Consensus 239 ~~~---~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~--~~---~~~~h--~~~i~~~~~ 308 (368)
|+| .++.+...++.+.+| +... .+++.. .. ...++ ...+..++|
T Consensus 185 ~~pdg~~l~~~~~~~~~i~~~------------------~~~~--------~~g~~~~~~~~~~~~~~~~~~~~~~~i~~ 238 (343)
T 1ri6_A 185 FHPNEQYAYCVNELNSSVDVW------------------ELKD--------PHGNIECVQTLDMMPENFSDTRWAADIHI 238 (343)
T ss_dssp ECTTSSEEEEEETTTTEEEEE------------------ESSC--------TTSCCEEEEEEECSCTTCCSCCCEEEEEE
T ss_pred ECCCCCEEEEEeCCCCEEEEE------------------EecC--------CCCcEEEEeeccccCccccccCCccceEE
Confidence 875 122222222222221 1100 111111 01 11111 345678999
Q ss_pred eCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeecccCceeeecceeee
Q psy4579 309 MPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 309 ~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p~~ 365 (368)
+|++..++++++.|+.|.+||+.... +....+..+..+.. +.+++|+|..
T Consensus 239 s~dg~~l~v~~~~~~~i~v~d~~~~~------~~~~~~~~~~~~~~-~~~~~~s~dg 288 (343)
T 1ri6_A 239 TPDGRHLYACDRTASLITVFSVSEDG------SVLSKEGFQPTETQ-PRGFNVDHSG 288 (343)
T ss_dssp CTTSSEEEEEETTTTEEEEEEECTTS------CCEEEEEEEECSSS-CCCEEECTTS
T ss_pred CCCCCEEEEEecCCCEEEEEEEcCCC------CceEEeeeecCCCc-cceEEECCCC
Confidence 99997777788889999999997311 11222223333333 7888888753
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.56 E-value=2.1e-15 Score=147.20 Aligned_cols=193 Identities=13% Similarity=0.140 Sum_probs=112.1
Q ss_pred ceeeEecCCcccccCCCCccccccCcceeeeccccCCCCCcE----EEEEEecCCCccccccCCc-----ccCCCCcccC
Q psy4579 43 SLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQNHL----LIASVQLPNEDAQFDASNY-----DTDKGGNVQL 113 (368)
Q Consensus 43 ~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~i~~~~~~~~~~~~~~~~~-----~~~~~g~i~i 113 (368)
..+++|+||++.++.+ .++.+ +.|+...|........+. .+..+.|++++..+..... ..+.++.|.+
T Consensus 18 ~~~~~~s~dg~~~~~~-~d~~i--~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~ 94 (719)
T 1z68_A 18 TFFPNWISGQEYLHQS-ADNNI--VLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYI 94 (719)
T ss_dssp CCCCEESSSSEEEEEC-TTSCE--EEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEE
T ss_pred CCccEECCCCeEEEEc-CCCCE--EEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEE
Confidence 4579999999766655 57777 555555443322111111 1456667665554432221 1123688999
Q ss_pred CCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcc--cccceeeeccccce------ecce
Q psy4579 114 PNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRV--IDAKTIFTGHTAVV------EVRY 185 (368)
Q Consensus 114 ~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~--~~~~~~~~~h~~~v------~~~~ 185 (368)
|+.++............+.+++|||+| +.||.+. |+.|++||+.++....-. ......+.||...+ ....
T Consensus 95 ~d~~~g~~~~~~~l~~~~~~~~~SPDG-~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~ 172 (719)
T 1z68_A 95 YDLSNGEFVRGNELPRPIQYLCWSPVG-SKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKY 172 (719)
T ss_dssp EETTTTEECCSSCCCSSBCCEEECSST-TCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSC
T ss_pred EECCCCccccceecCcccccceECCCC-CEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcc
Confidence 998765441111223578999999999 8888886 789999999876421000 00001122332111 0002
Q ss_pred eeEEeCCCCCeEEEeeCCC----------------------------------cEEEEECCCCCCCC-ccccceeeeecc
Q psy4579 186 GLSWNPSLNGYLLSASDDH----------------------------------TICLWDINATPKEN-RVIDAKTIFTGH 230 (368)
Q Consensus 186 ~i~~~p~~~~~l~s~s~dg----------------------------------~i~iwd~~~~~~~~-~~~~~~~~~~~~ 230 (368)
+++|+|+ +..|++++.|. .|++||+.++.... ..+.....+.+|
T Consensus 173 ~~~wSPD-G~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~ 251 (719)
T 1z68_A 173 ALWWSPN-GKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASS 251 (719)
T ss_dssp CEEECTT-SSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTS
T ss_pred cEEECCC-CCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCC
Confidence 8999999 89999887653 78899988753100 000000223457
Q ss_pred cccEeEEEEee
Q psy4579 231 TAVVEDYSIHR 241 (368)
Q Consensus 231 ~~~v~~v~~~~ 241 (368)
...+..++|+|
T Consensus 252 ~~~~~~~~~Sp 262 (719)
T 1z68_A 252 DYYFSWLTWVT 262 (719)
T ss_dssp CEEEEEEEESS
T ss_pred cceEEEeEEeC
Confidence 77888899976
|
| >3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} | Back alignment and structure |
|---|
Probab=99.56 E-value=6.6e-14 Score=123.17 Aligned_cols=237 Identities=7% Similarity=0.021 Sum_probs=136.6
Q ss_pred EecCCccc-ccCCCCccccccCcceeeeccccCC-CCCcEEEEEEecCCCccccccCCcccCCCCcccCCCCCeee--ee
Q psy4579 47 QWLPDVTS-VQLPNEDAQFDASNYDTDKGTHTSD-EQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQF--DA 122 (368)
Q Consensus 47 ~~~p~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~--~~ 122 (368)
.|.+++.+ +++++.++.+.++ +...+..... ....... .+.+.+++..+.+.. ..++.|.+|+..... ..
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~--d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~---~~~~~i~~~d~~~~~~~~~ 77 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFF--STDTLEILNQITLGYDFV-DTAITSDCSNVVVTS---DFCQTLVQIETQLEPPKVV 77 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEE--ETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEE---STTCEEEEEECSSSSCEEE
T ss_pred eEcCCCCEEEEEecCCCeEEEE--eCcccceeeeEEccCCcc-eEEEcCCCCEEEEEe---CCCCeEEEEECCCCceeEE
Confidence 34455444 5666777777544 4443433222 1111223 666755554343333 246789999986543 34
Q ss_pred ccccCCCCceeeEecCCCCCeeEEEeCCC---cEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCC-eEE
Q psy4579 123 SNYDTDKGGYGLSWNPSLNGYLLSASDDH---TICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNG-YLL 198 (368)
Q Consensus 123 ~~~~h~~~v~~l~~sp~~~~~lasg~~dg---~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~-~l~ 198 (368)
....+..+..+++|+|++ ++++++..++ .|.+||+.++. ....+..+..+ . +++|+|+ ++ +++
T Consensus 78 ~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~~~~i~v~d~~~~~-------~~~~~~~~~~~-~---~~~~spd-g~~l~~ 144 (331)
T 3u4y_A 78 AIQEGQSSMADVDITPDD-QFAVTVTGLNHPFNMQSYSFLKNK-------FISTIPIPYDA-V---GIAISPN-GNGLIL 144 (331)
T ss_dssp EEEECSSCCCCEEECTTS-SEEEECCCSSSSCEEEEEETTTTE-------EEEEEECCTTE-E---EEEECTT-SSCEEE
T ss_pred ecccCCCCccceEECCCC-CEEEEecCCCCcccEEEEECCCCC-------eEEEEECCCCc-c---ceEECCC-CCEEEE
Confidence 444555566669999999 8888555553 89999998763 33445544443 3 9999999 65 555
Q ss_pred EeeCCCc-EEEEECCCCCCCCccccceeeeecccccEeEEEEeeecccccCCCCccceEEEEeecCCcccccccccccCC
Q psy4579 199 SASDDHT-ICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTD 277 (368)
Q Consensus 199 s~s~dg~-i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~ 277 (368)
++..++. |.+|++......... . ...+ ........++|+|. + .++++.. ..
T Consensus 145 ~~~~~~~~i~~~~~~~~g~~~~~-~-~~~~-~~~~~~~~~~~spd--------g-~~l~v~~----------------~~ 196 (331)
T 3u4y_A 145 IDRSSANTVRRFKIDADGVLFDT-G-QEFI-SGGTRPFNITFTPD--------G-NFAFVAN----------------LI 196 (331)
T ss_dssp EEETTTTEEEEEEECTTCCEEEE-E-EEEE-CSSSSEEEEEECTT--------S-SEEEEEE----------------TT
T ss_pred EecCCCceEEEEEECCCCcEeec-C-Cccc-cCCCCccceEECCC--------C-CEEEEEe----------------CC
Confidence 6666688 999999754321000 0 1111 22334566666641 0 1122111 11
Q ss_pred CCCcccccCCCCce---eeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCC
Q psy4579 278 KGDFGGFGSVSGKI---EIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 278 ~~~~~~~~~~~~~~---~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
.+.+.+|+..+++. ...+. +...+..++|+|++..++++...++.|.+||+..
T Consensus 197 ~~~v~v~d~~~~~~~~~~~~~~--~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~ 252 (331)
T 3u4y_A 197 GNSIGILETQNPENITLLNAVG--TNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLS 252 (331)
T ss_dssp TTEEEEEECSSTTSCEEEEEEE--CSSCCCCEEECTTSSEEEEECSSEEEEEEEETTT
T ss_pred CCeEEEEECCCCcccceeeecc--CCCCCceEEECCCCCEEEEEEcCCCEEEEEECCC
Confidence 22344455545554 33333 3467789999999966777777789999999975
|
| >3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A | Back alignment and structure |
|---|
Probab=99.54 E-value=1.1e-13 Score=123.40 Aligned_cols=268 Identities=12% Similarity=0.041 Sum_probs=140.5
Q ss_pred ceeeEecCCcccccCCCCc----cccccCcceeeecccc--CC-CCCcEEEEEEecCCCccccccCCcccCCCCcccCCC
Q psy4579 43 SLTAQWLPDVTSVQLPNED----AQFDASNYDTDKGTHT--SD-EQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPN 115 (368)
Q Consensus 43 ~~~~~~~p~~~~l~~~~~~----~~~~~~~~~~~~~~~~--~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~ 115 (368)
+..++|+||+++|++++.+ +.+.+|.++...|... .. .........+.+ .+..+..+.+ .++.+.+|+
T Consensus 52 p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~---~~~~v~~~~ 126 (361)
T 3scy_A 52 PSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANY---SGGSITVFP 126 (361)
T ss_dssp CCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEET---TTTEEEEEE
T ss_pred CceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEEC---CCCEEEEEE
Confidence 4458999999998887775 5665555544323211 11 000011122223 2333333332 468888888
Q ss_pred CCee-eee---cc-----------ccCCCCceeeEecCCCCCee-EEEeCCCcEEEEeCCCCCC----C-Cccc-cccee
Q psy4579 116 EDAQ-FDA---SN-----------YDTDKGGYGLSWNPSLNGYL-LSASDDHTICLWDINATPK----E-NRVI-DAKTI 173 (368)
Q Consensus 116 ~~~~-~~~---~~-----------~~h~~~v~~l~~sp~~~~~l-asg~~dg~v~iwd~~~~~~----~-~~~~-~~~~~ 173 (368)
.+.. ... .. ..+...+.+++|+|+| ++| +++..++.|++|++..... . .... .....
T Consensus 127 ~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg-~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~ 205 (361)
T 3scy_A 127 IGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDG-KYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAF 205 (361)
T ss_dssp BCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTS-SEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEE
T ss_pred eCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCC-CEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccce
Confidence 6521 111 11 1123345789999999 644 5555689999999875431 0 0000 00011
Q ss_pred eeccccceecceeeEEeCCCCCeEEEee-CCCcEEEEECCCCCCCCccccceeee---ecccccEeEEEEee---ecccc
Q psy4579 174 FTGHTAVVEVRYGLSWNPSLNGYLLSAS-DDHTICLWDINATPKENRVIDAKTIF---TGHTAVVEDYSIHR---LILGT 246 (368)
Q Consensus 174 ~~~h~~~v~~~~~i~~~p~~~~~l~s~s-~dg~i~iwd~~~~~~~~~~~~~~~~~---~~~~~~v~~v~~~~---~~~~~ 246 (368)
...+..... .++|+|+ +.++++++ .++.|.+||+.++.. ..+..+ ..+......++|+| .++.+
T Consensus 206 ~~~~~~~~~---~~~~spd-g~~l~v~~~~~~~v~v~~~~~g~~-----~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~ 276 (361)
T 3scy_A 206 KVAPGSGPR---HLIFNSD-GKFAYLINEIGGTVIAFRYADGML-----DEIQTVAADTVNAQGSGDIHLSPDGKYLYAS 276 (361)
T ss_dssp ECCTTCCEE---EEEECTT-SSEEEEEETTTCEEEEEEEETTEE-----EEEEEEESCSSCCCCEEEEEECTTSSEEEEE
T ss_pred ecCCCCCCe---EEEEcCC-CCEEEEEcCCCCeEEEEEecCCce-----EEeEEEecCCCCCCCcccEEECCCCCEEEEE
Confidence 112223343 8999999 77766666 699999999985421 111222 22333456777765 11111
Q ss_pred cCC-CCccceEEEEeecCCcccccccccccCCCCCcccccC--CCCce--eeeeecCcccceeEEEEeCCCCcEEEEecC
Q psy4579 247 HTS-DEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGS--VSGKI--EIEIKINHEGEVNRARYMPQNPCVIATKTP 321 (368)
Q Consensus 247 ~~~-d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~--~~~~~--~~~~~~~h~~~i~~~~~~p~~~~~lasgs~ 321 (368)
... ++. +.+|+. .+++. ..... . ...+..++|+|++..+++++..
T Consensus 277 ~~~~~~~----------------------------i~v~~~~~~~g~~~~~~~~~-~-g~~~~~~~~spdg~~l~~~~~~ 326 (361)
T 3scy_A 277 NRLKADG----------------------------VAIFKVDETNGTLTKVGYQL-T-GIHPRNFIITPNGKYLLVACRD 326 (361)
T ss_dssp ECSSSCE----------------------------EEEEEECTTTCCEEEEEEEE-C-SSCCCEEEECTTSCEEEEEETT
T ss_pred CCCCCCE----------------------------EEEEEEcCCCCcEEEeeEec-C-CCCCceEEECCCCCEEEEEECC
Confidence 111 111 222222 12332 12222 2 4567899999999666666568
Q ss_pred CCeEEEEECCCCCCCCCCCCCCCCceeeecccCceeeecce
Q psy4579 322 SSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTY 362 (368)
Q Consensus 322 Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~ 362 (368)
++.|.+|++.... +....+ .-..+...+.|++|.
T Consensus 327 ~~~v~v~~~d~~~------g~~~~~-~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 327 TNVIQIFERDQAT------GLLTDI-KKDIKVDKPVCLKFV 360 (361)
T ss_dssp TTEEEEEEECTTT------CCEEEC-SCCEECSSEEEEEEE
T ss_pred CCCEEEEEEECCC------CcEeec-ceeeeCCCCeEEEEc
Confidence 8999998775311 111110 012345678898886
|
| >3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* | Back alignment and structure |
|---|
Probab=99.52 E-value=9.2e-13 Score=116.72 Aligned_cols=181 Identities=13% Similarity=0.114 Sum_probs=119.2
Q ss_pred CCcccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccc-------
Q psy4579 108 GGNVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAV------- 180 (368)
Q Consensus 108 ~g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~------- 180 (368)
++.|.+||...............+.+++|+|++..++++...++.|.+||..+++ ....+..+...
T Consensus 68 ~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~-------~~~~~~~~~~~~~~~~~~ 140 (353)
T 3vgz_A 68 GGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGE-------VKGRLVLDDRKRTEEVRP 140 (353)
T ss_dssp SEEEEEECTTTCCEEEEEEESSCCCSEEEETTTTEEEEEETTTTEEEEEETTTCC-------EEEEEESCCCCCCSSCCC
T ss_pred CccEEEEcCCCCeEEEEEecCCCcceEEECCCCCEEEEEecCCCEEEEEeCCCCe-------eEEEEecCCCccccccCC
Confidence 6789999987654444444556688999999993356666778999999998764 23444433221
Q ss_pred --eecceeeEEeCCCCCeEEEee--CCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeeecccccCCCCccceE
Q psy4579 181 --VEVRYGLSWNPSLNGYLLSAS--DDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLL 256 (368)
Q Consensus 181 --v~~~~~i~~~p~~~~~l~s~s--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~ 256 (368)
+. +++|+|+ ++++++++ .++.|.+||+.++ .....+..+...+..++|++. ...++
T Consensus 141 ~~~~---~~~~s~d-g~~l~~~~~~~~~~i~~~d~~~~-------~~~~~~~~~~~~~~~~~~s~d---------g~~l~ 200 (353)
T 3vgz_A 141 LQPR---ELVADDA-TNTVYISGIGKESVIWVVDGGNI-------KLKTAIQNTGKMSTGLALDSE---------GKRLY 200 (353)
T ss_dssp CEEE---EEEEETT-TTEEEEEEESSSCEEEEEETTTT-------EEEEEECCCCTTCCCCEEETT---------TTEEE
T ss_pred CCCc---eEEECCC-CCEEEEEecCCCceEEEEcCCCC-------ceEEEecCCCCccceEEECCC---------CCEEE
Confidence 33 8999998 67666554 5889999999876 234444434444666777641 01122
Q ss_pred EEEeecCCcccccccccccCCCCCcccccCCCCceeeeeec---CcccceeEEEEeCCCCcEEEEecCCCeEEEEECCC
Q psy4579 257 IASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKI---NHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~---~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
+.. ..+.+..++..+++....+.. ++...+..++|+|++..++++...++.|.+||+..
T Consensus 201 ~~~-----------------~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~ 262 (353)
T 3vgz_A 201 TTN-----------------ADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRN 262 (353)
T ss_dssp EEC-----------------TTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTT
T ss_pred EEc-----------------CCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCC
Confidence 111 112344455555665554443 35567888999999977777777779999999965
|
| >1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B* | Back alignment and structure |
|---|
Probab=99.51 E-value=1.1e-13 Score=121.83 Aligned_cols=193 Identities=12% Similarity=0.088 Sum_probs=114.6
Q ss_pred CCCcccCCCCCeeeeecccc--C----CCCceeeEecCCCCCeeEEEe------------CCCcEEEEeCCCCCCCCccc
Q psy4579 107 KGGNVQLPNEDAQFDASNYD--T----DKGGYGLSWNPSLNGYLLSAS------------DDHTICLWDINATPKENRVI 168 (368)
Q Consensus 107 ~~g~i~i~~~~~~~~~~~~~--h----~~~v~~l~~sp~~~~~lasg~------------~dg~v~iwd~~~~~~~~~~~ 168 (368)
.++.|.+|+........... + ...+.+++|+|+| +.|++++ .++.|.+||+.++.
T Consensus 54 ~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~------ 126 (337)
T 1pby_B 54 KSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDG-KTLAIYESPVRLELTHFEVQPTRVALYDAETLS------ 126 (337)
T ss_dssp TTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTS-SEEEEEEEEEEECSSCEEECCCEEEEEETTTTE------
T ss_pred CCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCC-CEEEEEecccccccccccccCceEEEEECCCCc------
Confidence 46889999976433222222 2 2378899999999 7888876 57999999998753
Q ss_pred ccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeeccc--ccEeEEEEee---ec
Q psy4579 169 DAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHT--AVVEDYSIHR---LI 243 (368)
Q Consensus 169 ~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~--~~v~~v~~~~---~~ 243 (368)
....+.. ...+. +++|+|+ +.+|+++ ++.|.+||+.++. ....+..+. .++ .|++ .+
T Consensus 127 -~~~~~~~-~~~~~---~~~~s~d-g~~l~~~--~~~i~~~d~~~~~-------~~~~~~~~~~~~~~---~~s~dg~~l 188 (337)
T 1pby_B 127 -RRKAFEA-PRQIT---MLAWARD-GSKLYGL--GRDLHVMDPEAGT-------LVEDKPIQSWEAET---YAQPDVLAV 188 (337)
T ss_dssp -EEEEEEC-CSSCC---CEEECTT-SSCEEEE--SSSEEEEETTTTE-------EEEEECSTTTTTTT---BCCCBCCCC
T ss_pred -EEEEEeC-CCCcc---eeEECCC-CCEEEEe--CCeEEEEECCCCc-------EeeeeeccccCCCc---eeCCCccEE
Confidence 2334443 23343 8999999 7777777 6899999998763 122222111 111 2221 01
Q ss_pred ccccCCCCcc---------------------ceEEE--------------------EeecCCcccccccccccCCCCCcc
Q psy4579 244 LGTHTSDEQN---------------------HLLIA--------------------SVQLPNEDAQFDASNYDTDKGDFG 282 (368)
Q Consensus 244 ~~~~~~d~~~---------------------~~~~~--------------------~~~~~~~~~~~~~~~~d~~~~~~~ 282 (368)
+.+...+... .++++ .+.+.+++..+.+. .+.+.
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~-----~~~v~ 263 (337)
T 1pby_B 189 WNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA-----YNVLE 263 (337)
T ss_dssp CCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE-----ESEEE
T ss_pred eeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe-----CCeEE
Confidence 1111111000 01111 12333333333222 24577
Q ss_pred cccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCC
Q psy4579 283 GFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 283 ~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
.|+..+++....+. ....+.+++|+|++. .|++++.|+.|++||+..
T Consensus 264 ~~d~~~~~~~~~~~--~~~~~~~~~~s~dg~-~l~~~~~~~~i~v~d~~~ 310 (337)
T 1pby_B 264 SFDLEKNASIKRVP--LPHSYYSVNVSTDGS-TVWLGGALGDLAAYDAET 310 (337)
T ss_dssp EEETTTTEEEEEEE--CSSCCCEEEECTTSC-EEEEESBSSEEEEEETTT
T ss_pred EEECCCCcCcceec--CCCceeeEEECCCCC-EEEEEcCCCcEEEEECcC
Confidence 78877777665554 335678999999995 444668899999999975
|
| >1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* | Back alignment and structure |
|---|
Probab=99.50 E-value=1.4e-13 Score=121.73 Aligned_cols=254 Identities=8% Similarity=0.030 Sum_probs=141.4
Q ss_pred eEecCCcccccCCCCccccccCcceeeeccccCC--CCCcEEEEEEecCCCccccccCCcccCCCCcccCCCCCeee-ee
Q psy4579 46 AQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSD--EQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQF-DA 122 (368)
Q Consensus 46 ~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~-~~ 122 (368)
+++.++++.+++++.++.+.++ +...+..... .........+.+.+++..+..+. ..++.|.+|+..... ..
T Consensus 5 ~~~~~~~~~~v~~~~~~~v~~~--d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~---~~~~~i~~~d~~t~~~~~ 79 (349)
T 1jmx_B 5 PALKAGHEYMIVTNYPNNLHVV--DVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLN---NHYGDIYGIDLDTCKNTF 79 (349)
T ss_dssp CCCCTTCEEEEEEETTTEEEEE--ETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEE---TTTTEEEEEETTTTEEEE
T ss_pred ccccCCCEEEEEeCCCCeEEEE--ECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEe---CCCCcEEEEeCCCCcEEE
Confidence 5678889999999899988554 4443322211 11100122344544443333222 347889999986433 32
Q ss_pred ccc-cC-----CCCceeeEecCCCCCeeEEEeCC------------CcEEEEeCCCCCCCCcccccceeeeccccceecc
Q psy4579 123 SNY-DT-----DKGGYGLSWNPSLNGYLLSASDD------------HTICLWDINATPKENRVIDAKTIFTGHTAVVEVR 184 (368)
Q Consensus 123 ~~~-~h-----~~~v~~l~~sp~~~~~lasg~~d------------g~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~ 184 (368)
... .+ ...+.+++|+|+| ++|++++.+ +.|.+||+.++... .....+..+. .+.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~spdg-~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~----~~~~~~~~~~-~~~-- 151 (349)
T 1jmx_B 80 HANLSSVPGEVGRSMYSFAISPDG-KEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEA----KPVRTFPMPR-QVY-- 151 (349)
T ss_dssp EEESCCSTTEEEECSSCEEECTTS-SEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGB----CCSEEEECCS-SCC--
T ss_pred EEEcccccccccccccceEECCCC-CEEEEEcccccccccccccCCCeEEEEECCCcccc----ceeeeccCCC-ccc--
Confidence 222 22 2348899999999 888888865 89999999874321 1233444333 353
Q ss_pred eeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeeccc---------------------c---cEeEEEEe
Q psy4579 185 YGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHT---------------------A---VVEDYSIH 240 (368)
Q Consensus 185 ~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~---------------------~---~v~~v~~~ 240 (368)
+++|+|+ +. ++.++. .|.+||+.++.. ...+..+. . ....+++.
T Consensus 152 -~~~~s~d-g~-l~~~~~--~i~~~d~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (349)
T 1jmx_B 152 -LMRAADD-GS-LYVAGP--DIYKMDVKTGKY-------TVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARF 219 (349)
T ss_dssp -CEEECTT-SC-EEEESS--SEEEECTTTCCE-------EEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC
T ss_pred -ceeECCC-Cc-EEEccC--cEEEEeCCCCce-------eccccccccCCccccCccceeeecCCCcceeEEeeeeeeec
Confidence 8999998 66 455544 499999987632 22222110 0 11222222
Q ss_pred e-------------ecccccCCCCccceE--------EEEeecCC-cccccccccccCCCCCcccccCCCCceeeeeecC
Q psy4579 241 R-------------LILGTHTSDEQNHLL--------IASVQLPN-EDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKIN 298 (368)
Q Consensus 241 ~-------------~~~~~~~~d~~~~~~--------~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 298 (368)
+ .++......+....+ ...+.+.+ ++..+.+. .+.+..|+..+++....+.
T Consensus 220 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~-----~~~v~~~d~~~~~~~~~~~-- 292 (349)
T 1jmx_B 220 KDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV-----LNRLAKYDLKQRKLIKAAN-- 292 (349)
T ss_dssp -------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE-----ESEEEEEETTTTEEEEEEE--
T ss_pred CCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE-----cCeEEEEECccCeEEEEEc--
Confidence 1 000000011111111 11222233 33333222 3457778888877665554
Q ss_pred cccceeEEEEeCCCCcEEEEecCCCeEEEEECCC
Q psy4579 299 HEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 299 h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
....+.+++|+|++..++ +++.++.|++||+..
T Consensus 293 ~~~~~~~~~~s~dg~~l~-~~~~~~~v~v~d~~~ 325 (349)
T 1jmx_B 293 LDHTYYCVAFDKKGDKLY-LGGTFNDLAVFNPDT 325 (349)
T ss_dssp CSSCCCEEEECSSSSCEE-EESBSSEEEEEETTT
T ss_pred CCCCccceEECCCCCEEE-EecCCCeEEEEeccc
Confidence 234578999999996555 567889999999975
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.50 E-value=2.2e-14 Score=139.98 Aligned_cols=291 Identities=11% Similarity=0.083 Sum_probs=162.8
Q ss_pred hhhhhhhhhcCcchheeeccccc-ccCceeeEecCCcccccCCCC---------ccccccCcceeeecccc--CCCCCcE
Q psy4579 17 NEEYKIWKKNTPFLYDLVMTHAL-EWPSLTAQWLPDVTSVQLPNE---------DAQFDASNYDTDKGTHT--SDEQNHL 84 (368)
Q Consensus 17 ~~~~~~w~~~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~l~~~~~---------~~~~~~~~~~~~~~~~~--~~~~~~~ 84 (368)
+...++|+..+......+..+.. ...+.+++|+|||++|++++. ++.+ +.|++..|... .....
T Consensus 35 d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i--~~~d~~~g~~~~~~~l~~-- 110 (719)
T 1z68_A 35 DNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATY--YIYDLSNGEFVRGNELPR-- 110 (719)
T ss_dssp TSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEE--EEEETTTTEECCSSCCCS--
T ss_pred CCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEE--EEEECCCCccccceecCc--
Confidence 34567777766654433332222 134789999999999999876 5666 55565555431 11111
Q ss_pred EEEEEecCCCccccccCCcccCCCCcccCCCCCeeeeecc--ccCCCCc-----------------eeeEecCCCCCeeE
Q psy4579 85 LIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQFDASN--YDTDKGG-----------------YGLSWNPSLNGYLL 145 (368)
Q Consensus 85 ~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~--~~h~~~v-----------------~~l~~sp~~~~~la 145 (368)
.+..+.|++++..+... .++.|++|+..+.....+ .++...| .+++|+|+| +.||
T Consensus 111 ~~~~~~~SPDG~~la~~-----~~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG-~~la 184 (719)
T 1z68_A 111 PIQYLCWSPVGSKLAYV-----YQNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNG-KFLA 184 (719)
T ss_dssp SBCCEEECSSTTCEEEE-----ETTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTS-SEEE
T ss_pred ccccceECCCCCEEEEE-----ECCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCC-CEEE
Confidence 24556676665544432 267899999865332222 2232222 589999999 8999
Q ss_pred EEeCCC----------------------------------cEEEEeCCCCCCC-CcccccceeeeccccceecceeeEEe
Q psy4579 146 SASDDH----------------------------------TICLWDINATPKE-NRVIDAKTIFTGHTAVVEVRYGLSWN 190 (368)
Q Consensus 146 sg~~dg----------------------------------~v~iwd~~~~~~~-~~~~~~~~~~~~h~~~v~~~~~i~~~ 190 (368)
.++.|. .|++||+.++... ...+.....+.+|...+. .++|+
T Consensus 185 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~S 261 (719)
T 1z68_A 185 YAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFS---WLTWV 261 (719)
T ss_dssp EEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEE---EEEES
T ss_pred EEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEE---EeEEe
Confidence 988652 7889998875310 000000022346777775 99999
Q ss_pred CCCCCeEEEeeCC----CcEEEEE----CCCCCCCCccccceeee----ecccccEe-----EEEEeee----cccccCC
Q psy4579 191 PSLNGYLLSASDD----HTICLWD----INATPKENRVIDAKTIF----TGHTAVVE-----DYSIHRL----ILGTHTS 249 (368)
Q Consensus 191 p~~~~~l~s~s~d----g~i~iwd----~~~~~~~~~~~~~~~~~----~~~~~~v~-----~v~~~~~----~~~~~~~ 249 (368)
|+ +.++++.... ..|.+|| +.++.. ...+ .+|...+. .+.|++. ++.+...
T Consensus 262 pD-~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~-------~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 333 (719)
T 1z68_A 262 TD-ERVCLQWLKRVQNVSVLSICDFREDWQTWDC-------PKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDK 333 (719)
T ss_dssp SS-SEEEEEEEESSTTEEEEEEEEECSSSSSEEC-------CGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECT
T ss_pred CC-CeEEEEEeccccCeEEEEEEcccCCCCCCce-------EEEEecccccCCceEccccCCccEECCCCCeEEEEEEcc
Confidence 99 7777775433 2488899 665521 1222 34555555 5666541 1111111
Q ss_pred CCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecC----CCeE
Q psy4579 250 DEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTP----SSDV 325 (368)
Q Consensus 250 d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~----Dg~i 325 (368)
++... +..++...++ ...+. .+...+..+.+. ++..+++++.. ++.+
T Consensus 334 ~g~~~--------------------------l~~~~~~~~~-~~~lt-~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~ 384 (719)
T 1z68_A 334 DGYKH--------------------------IHYIKDTVEN-AIQIT-SGKWEAINIFRV-TQDSLFYSSNEFEEYPGRR 384 (719)
T ss_dssp TSCEE--------------------------EEEESSCSTT-CEECS-CSSSCEEEEEEE-CSSEEEEEESCGGGCTTCB
T ss_pred CCceE--------------------------EEEEECCCCc-eEecc-cCceEEEEEEEE-eCCEEEEEEecCCCCCceE
Confidence 11111 2223333333 22222 455667777777 77677767665 6889
Q ss_pred EEEECCCCCCCCCCCCCCCCcee----eecccCceeeecceee
Q psy4579 326 LVFDYTKHPSKPDPNGECHPDLR----LRGHQKEGLIEGTYNC 364 (368)
Q Consensus 326 ~iwd~~~~~~~~~~~~~~~~~~~----~~gh~~~V~~l~w~p~ 364 (368)
++|.+.... +... ... +.+|...+..+.|+|+
T Consensus 385 ~l~~~~~~~------g~~~-~~~l~~~~~~~~~~~~~~~~s~d 420 (719)
T 1z68_A 385 NIYRISIGS------YPPS-KKCVTCHLRKERCQYYTASFSDY 420 (719)
T ss_dssp EEEEEECSS------SSCC-EEESSTTTTTTTBCBEEEEECGG
T ss_pred EEEEEeCCC------CCCC-ceeccCccCCCCCceEEEEECCC
Confidence 999986411 1000 011 2236666777777775
|
| >3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.47 E-value=2.6e-13 Score=120.37 Aligned_cols=242 Identities=9% Similarity=0.114 Sum_probs=130.2
Q ss_pred ceeeEecCCcccccCCCC---ccccccCcceeeeccc--cCC-CCCcEEEEEEecCCCccccccCCcccCCCCcccCCCC
Q psy4579 43 SLTAQWLPDVTSVQLPNE---DAQFDASNYDTDKGTH--TSD-EQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNE 116 (368)
Q Consensus 43 ~~~~~~~p~~~~l~~~~~---~~~~~~~~~~~~~~~~--~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~ 116 (368)
+..++|+||++ |.+++. ++.+ +.|++..+.. ... ......+..+.+.++...+..+.+ .++.+.+|+.
T Consensus 42 p~~~a~spdg~-l~~~~~~~~~~~v--~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~---~~~~v~v~~~ 115 (347)
T 3hfq_A 42 PTYLALSAKDC-LYSVDKEDDEGGI--AAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANY---HKGTAEVMKI 115 (347)
T ss_dssp CCCEEECTTCE-EEEEEEETTEEEE--EEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEET---TTTEEEEEEE
T ss_pred cceEEEccCCe-EEEEEecCCCceE--EEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeC---CCCEEEEEEe
Confidence 45599999999 555443 4666 4445443321 110 000011223444444433333332 4788999987
Q ss_pred Ce----eeeecccc---------CCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeecccc-cee
Q psy4579 117 DA----QFDASNYD---------TDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTA-VVE 182 (368)
Q Consensus 117 ~~----~~~~~~~~---------h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~-~v~ 182 (368)
+. ........ +...+.+++|+|+| +++++...++.|++|++..... +.....+..+.+ .+.
T Consensus 116 ~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg-~l~v~~~~~~~v~~~~~~~~g~----~~~~~~~~~~~g~~p~ 190 (347)
T 3hfq_A 116 AADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDN-RLAVIDLGSDKVYVYNVSDAGQ----LSEQSVLTMEAGFGPR 190 (347)
T ss_dssp CTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTS-CEEEEETTTTEEEEEEECTTSC----EEEEEEEECCTTCCEE
T ss_pred CCCCCeeecceeecCCCCCCccccCCCceEEEECCCC-cEEEEeCCCCEEEEEEECCCCc----EEEeeeEEcCCCCCCc
Confidence 41 11111111 12348889999999 6777777899999999983221 011122222222 333
Q ss_pred cceeeEEeCCCCCe-EEEeeCCCcEEEEECCCCCCCCccccceeeeeccc------ccEeEEEEee---ecccccCCCCc
Q psy4579 183 VRYGLSWNPSLNGY-LLSASDDHTICLWDINATPKENRVIDAKTIFTGHT------AVVEDYSIHR---LILGTHTSDEQ 252 (368)
Q Consensus 183 ~~~~i~~~p~~~~~-l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~------~~v~~v~~~~---~~~~~~~~d~~ 252 (368)
.++|+|+ +++ ++++..++.|.+|++...... +.....+.... ..+..++|+| .++.+...++.
T Consensus 191 ---~~~~spd-g~~l~v~~~~~~~v~v~~~~~~~g~---~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~ 263 (347)
T 3hfq_A 191 ---HLVFSPD-GQYAFLAGELSSQIASLKYDTQTGA---FTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNT 263 (347)
T ss_dssp ---EEEECTT-SSEEEEEETTTTEEEEEEEETTTTE---EEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTE
T ss_pred ---eEEECCC-CCEEEEEeCCCCEEEEEEecCCCCc---eEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCE
Confidence 8999999 774 555677899999998752211 11122222211 3466777765 12122221222
Q ss_pred cceEEEEeecCCcccccccccccCCCCCcccccCC-CC--ceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEE
Q psy4579 253 NHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSV-SG--KIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFD 329 (368)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~~--~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd 329 (368)
+.+|+.. .+ +....+. .+...+..++|+|++..++++...++.|.+|+
T Consensus 264 ----------------------------v~v~~~~~~g~~~~~~~~~-~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~ 314 (347)
T 3hfq_A 264 ----------------------------LAVFAVTADGHLTLIQQIS-TEGDFPRDFDLDPTEAFVVVVNQNTDNATLYA 314 (347)
T ss_dssp ----------------------------EEEEEECGGGCEEEEEEEE-CSSSCCCEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred ----------------------------EEEEEECCCCcEEEeEEEe-cCCCCcCeEEECCCCCEEEEEEcCCCcEEEEE
Confidence 2222221 11 1222222 45566889999999965665555679999997
Q ss_pred CC
Q psy4579 330 YT 331 (368)
Q Consensus 330 ~~ 331 (368)
+.
T Consensus 315 ~d 316 (347)
T 3hfq_A 315 RD 316 (347)
T ss_dssp EC
T ss_pred Ee
Confidence 75
|
| >3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.47 E-value=4.2e-13 Score=118.99 Aligned_cols=236 Identities=7% Similarity=-0.015 Sum_probs=132.8
Q ss_pred CCCcccCCCCCe---ee-eeccccCCCCceeeEecCCCCCeeEEEeC--CCcEEEEeCCCCCCCCcccccceeeeccccc
Q psy4579 107 KGGNVQLPNEDA---QF-DASNYDTDKGGYGLSWNPSLNGYLLSASD--DHTICLWDINATPKENRVIDAKTIFTGHTAV 180 (368)
Q Consensus 107 ~~g~i~i~~~~~---~~-~~~~~~h~~~v~~l~~sp~~~~~lasg~~--dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~ 180 (368)
.++.|.+|..+. +. ......+...+..++|+|+| ++++++.. ++.|++|++.++.. ..+..+..+...
T Consensus 14 ~~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg-~l~~~~~~~~~~~v~~~~~~~g~~-----~~~~~~~~~~~~ 87 (347)
T 3hfq_A 14 TSQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKD-CLYSVDKEDDEGGIAAWQIDGQTA-----HKLNTVVAPGTP 87 (347)
T ss_dssp SCCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTC-EEEEEEEETTEEEEEEEEEETTEE-----EEEEEEEEESCC
T ss_pred CCCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCC-eEEEEEecCCCceEEEEEecCCcE-----EEeeeeecCCCC
Confidence 345566665432 22 22344566788899999998 64444432 68999999976531 122333445555
Q ss_pred eecceeeEEeCCCCCeEEEee-CCCcEEEEECCCCCCCCccccceeeeec---------ccccEeEEEEee--ecccccC
Q psy4579 181 VEVRYGLSWNPSLNGYLLSAS-DDHTICLWDINATPKENRVIDAKTIFTG---------HTAVVEDYSIHR--LILGTHT 248 (368)
Q Consensus 181 v~~~~~i~~~p~~~~~l~s~s-~dg~i~iwd~~~~~~~~~~~~~~~~~~~---------~~~~v~~v~~~~--~~~~~~~ 248 (368)
+. .++|+|+ +.+|++++ .++.|.+||+...... ..+..+.. +...+.+++|+| .++.+..
T Consensus 88 p~---~~a~spd-g~~l~~~~~~~~~v~v~~~~~~g~~----~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~ 159 (347)
T 3hfq_A 88 PA---YVAVDEA-RQLVYSANYHKGTAEVMKIAADGAL----TLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDL 159 (347)
T ss_dssp CS---EEEEETT-TTEEEEEETTTTEEEEEEECTTSCE----EEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEET
T ss_pred CE---EEEECCC-CCEEEEEeCCCCEEEEEEeCCCCCe----eecceeecCCCCCCccccCCCceEEEECCCCcEEEEeC
Confidence 54 9999999 88777777 7899999999643211 11222211 122477788875 2444444
Q ss_pred CCCccceEEEE---------------------eecCCcccccccccccCCCCCcccccCC--CCceeeeee-cCcc----
Q psy4579 249 SDEQNHLLIAS---------------------VQLPNEDAQFDASNYDTDKGDFGGFGSV--SGKIEIEIK-INHE---- 300 (368)
Q Consensus 249 ~d~~~~~~~~~---------------------~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~~~~~~~~-~~h~---- 300 (368)
.++.+.+|... +.+.++++.+.+. +...+.+.+|+.. +++...... ....
T Consensus 160 ~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~--~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~ 237 (347)
T 3hfq_A 160 GSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLA--GELSSQIASLKYDTQTGAFTQLGIVKTIPADYT 237 (347)
T ss_dssp TTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEE--ETTTTEEEEEEEETTTTEEEEEEEEESSCTTCC
T ss_pred CCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEE--eCCCCEEEEEEecCCCCceEEeeeeeecCCCCC
Confidence 44444444332 0111111111111 1122233444443 233211111 0111
Q ss_pred --cceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeecccCceeeecceeee
Q psy4579 301 --GEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 301 --~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p~~ 365 (368)
..+..++|+|+|..++++...++.|.+|++... +....+..+..|...+.+++|+|..
T Consensus 238 ~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~-------g~~~~~~~~~~~~~~~~~~~~spdg 297 (347)
T 3hfq_A 238 AHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTAD-------GHLTLIQQISTEGDFPRDFDLDPTE 297 (347)
T ss_dssp SCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGG-------GCEEEEEEEECSSSCCCEEEECTTS
T ss_pred CCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCC-------CcEEEeEEEecCCCCcCeEEECCCC
Confidence 357889999999767778888999999999631 1123333445566678899999864
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=99.43 E-value=5.2e-13 Score=130.65 Aligned_cols=155 Identities=12% Similarity=0.138 Sum_probs=90.6
Q ss_pred CceeeEecCCcccccCCCCccccccCcceeeecccc--CC-CC-CcEE--EEEEecCCCccccccCCc-----ccCCCCc
Q psy4579 42 PSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHT--SD-EQ-NHLL--IASVQLPNEDAQFDASNY-----DTDKGGN 110 (368)
Q Consensus 42 ~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~-~~-~~~~--i~~~~~~~~~~~~~~~~~-----~~~~~g~ 110 (368)
...+++|+||++.++++ ++.+.+| +...|... .. .. .... ...+.++++...+....- .-+..+.
T Consensus 18 ~~~~~~w~~dg~~~~~~--~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~ 93 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ--ENNILVF--NAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTAS 93 (740)
T ss_dssp CCCCEEECSSSEEEEEE--TTEEEEE--ETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEE
T ss_pred cccccEECCCCcEEEEc--CCcEEEE--ECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceE
Confidence 35579999999998875 7777555 44433321 11 11 1111 122455554443322211 1112366
Q ss_pred ccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCccc--ccceeeecccccee------
Q psy4579 111 VQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVI--DAKTIFTGHTAVVE------ 182 (368)
Q Consensus 111 i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~--~~~~~~~~h~~~v~------ 182 (368)
+.+|+..+.....+..|...+...+|||+| +.||.++ |+.|++|++.++....-.. .....+.++...|-
T Consensus 94 ~~~~d~~~~~~~~l~~~~~~~~~~~~SPdG-~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~ 171 (740)
T 4a5s_A 94 YDIYDLNKRQLITEERIPNNTQWVTWSPVG-HKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFS 171 (740)
T ss_dssp EEEEETTTTEECCSSCCCTTEEEEEECSST-TCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSS
T ss_pred EEEEECCCCcEEEcccCCCcceeeEECCCC-CEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcC
Confidence 779999877667777888899999999999 8888874 7899999998764211000 00012222221110
Q ss_pred cceeeEEeCCCCCeEEEeeCC
Q psy4579 183 VRYGLSWNPSLNGYLLSASDD 203 (368)
Q Consensus 183 ~~~~i~~~p~~~~~l~s~s~d 203 (368)
...++.|||| +..||.++.|
T Consensus 172 ~~~~~~wSpD-g~~la~~~~d 191 (740)
T 4a5s_A 172 AYSALWWSPN-GTFLAYAQFN 191 (740)
T ss_dssp SSBCEEECTT-SSEEEEEEEE
T ss_pred CCcceEECCC-CCEEEEEEEc
Confidence 0015899999 8888887644
|
| >1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B* | Back alignment and structure |
|---|
Probab=99.42 E-value=6.1e-12 Score=110.50 Aligned_cols=221 Identities=9% Similarity=-0.012 Sum_probs=127.5
Q ss_pred CCCcccCCCCCeeeeeccccCCC---CceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeec-c----c
Q psy4579 107 KGGNVQLPNEDAQFDASNYDTDK---GGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTG-H----T 178 (368)
Q Consensus 107 ~~g~i~i~~~~~~~~~~~~~h~~---~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~-h----~ 178 (368)
.++.|.+||.............. .+.+++|+|++..++++++.++.|.+||+.++. ....+.. + .
T Consensus 9 ~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~-------~~~~~~~~~~~~~~ 81 (337)
T 1pby_B 9 RPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGE-------TLGRIDLSTPEERV 81 (337)
T ss_dssp TTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCC-------EEEEEECCBTTEEE
T ss_pred CCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCC-------eEeeEEcCCccccc
Confidence 57889999986543333333333 588999999983345667778999999998764 2233332 1 2
Q ss_pred cceecceeeEEeCCCCCeEEEee------------CCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee--ecc
Q psy4579 179 AVVEVRYGLSWNPSLNGYLLSAS------------DDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LIL 244 (368)
Q Consensus 179 ~~v~~~~~i~~~p~~~~~l~s~s------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~ 244 (368)
..+. +++|+|+ +.++++++ .++.|.+||+.++. ....+.. ...+..++|++ ..+
T Consensus 82 ~~~~---~~~~s~d-g~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~-------~~~~~~~-~~~~~~~~~s~dg~~l 149 (337)
T 1pby_B 82 KSLF---GAALSPD-GKTLAIYESPVRLELTHFEVQPTRVALYDAETLS-------RRKAFEA-PRQITMLAWARDGSKL 149 (337)
T ss_dssp ECTT---CEEECTT-SSEEEEEEEEEEECSSCEEECCCEEEEEETTTTE-------EEEEEEC-CSSCCCEEECTTSSCE
T ss_pred cccc---ceEECCC-CCEEEEEecccccccccccccCceEEEEECCCCc-------EEEEEeC-CCCcceeEECCCCCEE
Confidence 2343 8999998 87888775 57999999998752 2333332 34466777874 112
Q ss_pred cccCCCCccceEEEE-----eecCCcc--cccccccccCCCC---------------------------------Ccccc
Q psy4579 245 GTHTSDEQNHLLIAS-----VQLPNED--AQFDASNYDTDKG---------------------------------DFGGF 284 (368)
Q Consensus 245 ~~~~~d~~~~~~~~~-----~~~~~~~--~~~~~~~~d~~~~---------------------------------~~~~~ 284 (368)
... ++.+.+|... ..++... ... .+..... .+..+
T Consensus 150 ~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~---~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 224 (337)
T 1pby_B 150 YGL--GRDLHVMDPEAGTLVEDKPIQSWEAET---YAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTM 224 (337)
T ss_dssp EEE--SSSEEEEETTTTEEEEEECSTTTTTTT---BCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEE
T ss_pred EEe--CCeEEEEECCCCcEeeeeeccccCCCc---eeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEE
Confidence 211 2233333210 0000000 000 1110000 13455
Q ss_pred cCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeecccCceeeecceee
Q psy4579 285 GSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYNC 364 (368)
Q Consensus 285 ~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p~ 364 (368)
+..+++........+...+.+++|+|++. .++++ ++.|.+||+.. ...+..+. ....+.+++|+|+
T Consensus 225 d~~~~~~~~~~~~~~~~~~~~~~~s~dg~-~l~~~--~~~v~~~d~~~----------~~~~~~~~-~~~~~~~~~~s~d 290 (337)
T 1pby_B 225 DLETGEMAMREVRIMDVFYFSTAVNPAKT-RAFGA--YNVLESFDLEK----------NASIKRVP-LPHSYYSVNVSTD 290 (337)
T ss_dssp ETTTCCEEEEEEEECSSCEEEEEECTTSS-EEEEE--ESEEEEEETTT----------TEEEEEEE-CSSCCCEEEECTT
T ss_pred eCCCCCceEeecCCCCCceeeEEECCCCC-EEEEe--CCeEEEEECCC----------CcCcceec-CCCceeeEEECCC
Confidence 66666554211224566788999999995 45455 79999999964 22222332 2345778888876
Q ss_pred e
Q psy4579 365 Y 365 (368)
Q Consensus 365 ~ 365 (368)
.
T Consensus 291 g 291 (337)
T 1pby_B 291 G 291 (337)
T ss_dssp S
T ss_pred C
Confidence 3
|
| >3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=2.4e-11 Score=106.92 Aligned_cols=247 Identities=11% Similarity=0.001 Sum_probs=148.2
Q ss_pred CceeeEecCCcccccCCCCccccc----------------------cCcceeeeccccCC--CCCcEEEEEEecCCCccc
Q psy4579 42 PSLTAQWLPDVTSVQLPNEDAQFD----------------------ASNYDTDKGTHTSD--EQNHLLIASVQLPNEDAQ 97 (368)
Q Consensus 42 ~~~~~~~~p~~~~l~~~~~~~~~~----------------------~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~ 97 (368)
.+..++++|+|+.+++.+.++.+. +..++...|..... .........+.+.+.+.
T Consensus 25 ~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~- 103 (329)
T 3fvz_A 25 QVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGN- 103 (329)
T ss_dssp CEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSC-
T ss_pred CceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCCC-
Confidence 366799999999988877764322 12222222221111 01111233444443333
Q ss_pred cccCCcccCCCCcccCCCCCee--eeecc---------ccCCCCceeeEecC-CCCCeeEEEe-CCCcEEEEeCCCCCCC
Q psy4579 98 FDASNYDTDKGGNVQLPNEDAQ--FDASN---------YDTDKGGYGLSWNP-SLNGYLLSAS-DDHTICLWDINATPKE 164 (368)
Q Consensus 98 ~~~~~~~~~~~g~i~i~~~~~~--~~~~~---------~~h~~~v~~l~~sp-~~~~~lasg~-~dg~v~iwd~~~~~~~ 164 (368)
+..+. ..++.|.+|+.++. ....+ ..+-.....|+++| ++ .++++.+ .++.|++|+....
T Consensus 104 l~v~d---~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g-~lyv~d~~~~~~I~~~~~~g~--- 176 (329)
T 3fvz_A 104 YWVTD---VALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTG-AVFVSDGYCNSRIVQFSPSGK--- 176 (329)
T ss_dssp EEEEE---TTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTC-CEEEEECSSCCEEEEECTTSC---
T ss_pred EEEEE---CCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCC-eEEEEeCCCCCeEEEEcCCCC---
Confidence 22222 24678888988765 33332 23445688999999 66 8888886 6999999995432
Q ss_pred Ccccccceeeec----------cccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeee--ecccc
Q psy4579 165 NRVIDAKTIFTG----------HTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIF--TGHTA 232 (368)
Q Consensus 165 ~~~~~~~~~~~~----------h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~--~~~~~ 232 (368)
....+.. +-... .+|+++|+.+.++++...++.|++||..++. .+..+ ..+..
T Consensus 177 -----~~~~~~~~g~~~~~~~~~~~~p---~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~-------~~~~~~~~~~~~ 241 (329)
T 3fvz_A 177 -----FVTQWGEESSGSSPRPGQFSVP---HSLALVPHLDQLCVADRENGRIQCFKTDTKE-------FVREIKHASFGR 241 (329)
T ss_dssp -----EEEEECEECCSSSCCTTEESCE---EEEEEETTTTEEEEEETTTTEEEEEETTTCC-------EEEEECCTTTTT
T ss_pred -----EEEEeccCCCCCCCCCcccCCC---cEEEEECCCCEEEEEECCCCEEEEEECCCCc-------EEEEEeccccCC
Confidence 2233321 11223 3999999756777888889999999998552 23343 23555
Q ss_pred cEeEEEEeeecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeee--cCcccceeEEEEeC
Q psy4579 233 VVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIK--INHEGEVNRARYMP 310 (368)
Q Consensus 233 ~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~--~~h~~~i~~~~~~p 310 (368)
.+..++++|-. ++... +. .. .-+.....+..++..+++....+. .++......++++|
T Consensus 242 ~~~~~~~~pg~-----------~~~~~------g~-~~--v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~ 301 (329)
T 3fvz_A 242 NVFAISYIPGF-----------LFAVN------GK-PY--FGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASE 301 (329)
T ss_dssp CEEEEEEETTE-----------EEEEE------CC-CC--TTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECT
T ss_pred CcceeeecCCE-----------EEEeC------CC-EE--eccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECC
Confidence 67778877611 11111 00 10 111222334555555666655542 25667789999999
Q ss_pred CCCcEEEEecCCCeEEEEECCC
Q psy4579 311 QNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 311 ~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
+| .++++...+++|++|++..
T Consensus 302 dG-~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 302 DG-TVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp TS-EEEEEESSSCCEEEEEEEE
T ss_pred CC-CEEEEECCCCEEEEEeCCc
Confidence 99 8999999999999999863
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=99.37 E-value=2.1e-12 Score=122.84 Aligned_cols=219 Identities=10% Similarity=-0.010 Sum_probs=130.1
Q ss_pred EEEEEecCCCccccccCCcccCCCCcccCCCCCeeeeeccccCC-CCceeeEecCCCCCeeEEEeC---CCcEEEEeCCC
Q psy4579 85 LIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQFDASNYDTD-KGGYGLSWNPSLNGYLLSASD---DHTICLWDINA 160 (368)
Q Consensus 85 ~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~h~-~~v~~l~~sp~~~~~lasg~~---dg~v~iwd~~~ 160 (368)
.+..+.+.+++..+.... ..+|++++|++++.....+..|. ..+.+++|+|+ +++++++. +...++|.+..
T Consensus 23 ~~~~~~~~~DG~~la~~s---~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd--~~l~~~~~~~g~~~~~l~~~~~ 97 (582)
T 3o4h_A 23 EKYSLQGVVDGDKLLVVG---FSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG--RVILVRDVSKGAEQHALFKVNT 97 (582)
T ss_dssp CEEEEEEEETTTEEEEEE---EETTEEEEEEEETTEEEECCSSCCSEECEECTTCS--EEEEEEECSTTSCCEEEEEEET
T ss_pred chheeecCCCCCeEEEEE---ccCCceeEEEEcCCCcEeeecccccccccccCCCC--eEEEEeccCCCCcceEEEEEec
Confidence 356666655544443322 23789999998766666666666 68999999998 67777765 56667776654
Q ss_pred --CCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEE
Q psy4579 161 --TPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYS 238 (368)
Q Consensus 161 --~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~ 238 (368)
... ...+....+ .. ..+|+|++...+++.+.++.+.+||+.++. . ..+..+.. .+++
T Consensus 98 ~~~g~-------~~~l~~~~~-~~---~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~-------~-~~l~~~~~--~~~~ 156 (582)
T 3o4h_A 98 SRPGE-------EQRLEAVKP-MR---ILSGVDTGEAVVFTGATEDRVALYALDGGG-------L-RELARLPG--FGFV 156 (582)
T ss_dssp TSTTC-------CEECTTSCS-BE---EEEEEECSSCEEEEEECSSCEEEEEEETTE-------E-EEEEEESS--CEEE
T ss_pred cCCCc-------cccccCCCC-ce---eeeeCCCCCeEEEEecCCCCceEEEccCCc-------E-EEeecCCC--ceEE
Confidence 221 122222222 22 568888844444444445555599998762 1 22222222 6777
Q ss_pred EeeecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEE
Q psy4579 239 IHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIAT 318 (368)
Q Consensus 239 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~las 318 (368)
|+|. + ..+...+..- . ....+..++..+++.. .+ ..|.+.+..++|+|+| ..|++
T Consensus 157 ~spD--------G-~~la~~~~~~---~----------~~~~i~~~d~~~g~~~-~l-~~~~~~~~~~~~SpDG-~~l~~ 211 (582)
T 3o4h_A 157 SDIR--------G-DLIAGLGFFG---G----------GRVSLFTSNLSSGGLR-VF-DSGEGSFSSASISPGM-KVTAG 211 (582)
T ss_dssp EEEE--------T-TEEEEEEEEE---T----------TEEEEEEEETTTCCCE-EE-CCSSCEEEEEEECTTS-CEEEE
T ss_pred ECCC--------C-CEEEEEEEcC---C----------CCeEEEEEcCCCCCce-Ee-ecCCCccccceECCCC-CEEEE
Confidence 7761 0 0111011000 0 0011333444444433 33 3788889999999999 56668
Q ss_pred ecCCC--eEEEEECCCCCCCCCCCCCCCCceeeecccCceeeec--------ceeee
Q psy4579 319 KTPSS--DVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEG--------TYNCY 365 (368)
Q Consensus 319 gs~Dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~--------w~p~~ 365 (368)
++.|+ .|++||+.. .... .+.+|...+.+++ |+|+.
T Consensus 212 ~~~~~~~~i~~~d~~~----------~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg 257 (582)
T 3o4h_A 212 LETAREARLVTVDPRD----------GSVE-DLELPSKDFSSYRPTAITWLGYLPDG 257 (582)
T ss_dssp EECSSCEEEEEECTTT----------CCEE-ECCCSCSHHHHHCCSEEEEEEECTTS
T ss_pred ccCCCeeEEEEEcCCC----------CcEE-EccCCCcChhhhhhccccceeEcCCC
Confidence 88888 899999974 2222 5678888888888 99874
|
| >3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.37 E-value=2.4e-12 Score=115.73 Aligned_cols=263 Identities=9% Similarity=-0.036 Sum_probs=140.4
Q ss_pred eEecCCcccccCCCC-ccccccCcceeeeccccCC-CCCcEEEEEEecCCCccccccCCcccCCCCcccCCCCCeeeeec
Q psy4579 46 AQWLPDVTSVQLPNE-DAQFDASNYDTDKGTHTSD-EQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQFDAS 123 (368)
Q Consensus 46 ~~~~p~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~ 123 (368)
.+|+|||++|++.+. ++...+|.++...+..... ......+....|.+++..+.... .++.+.+|+..+.....
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~----~~~~l~~~d~~~g~~~~ 116 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVK----DGRNLMRVDLATLEENV 116 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEE----TTTEEEEEETTTCCEEE
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEe----CCCeEEEEECCCCccee
Confidence 789999999999877 7765567777665543221 11111111223544443333222 35678888887543332
Q ss_pred c-ccCCCCceeeE--ecCCCCCeeEEE----------------------eCCCcEEEEeCCCCCCCCcccccceeeeccc
Q psy4579 124 N-YDTDKGGYGLS--WNPSLNGYLLSA----------------------SDDHTICLWDINATPKENRVIDAKTIFTGHT 178 (368)
Q Consensus 124 ~-~~h~~~v~~l~--~sp~~~~~lasg----------------------~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~ 178 (368)
+ ..+...+.... ++|++ ..++.. ..+..|.+||+.++. ...+..+.
T Consensus 117 ~~~~~~~~~~~~~~~~~~dg-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~--------~~~l~~~~ 187 (388)
T 3pe7_A 117 VYQVPAEWVGYGTWVANSDC-TKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGE--------STVILQEN 187 (388)
T ss_dssp EEECCTTEEEEEEEEECTTS-SEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCC--------EEEEEEES
T ss_pred eeechhhcccccceeECCCC-CeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCc--------eEEeecCC
Confidence 2 23344443333 48888 777642 245779999998763 34444555
Q ss_pred cceecceeeEEeC-CCCCeEEEeeCC------CcEEEEECCCCCCCCccccceeeeeccc--ccEeEEEEeeecccccCC
Q psy4579 179 AVVEVRYGLSWNP-SLNGYLLSASDD------HTICLWDINATPKENRVIDAKTIFTGHT--AVVEDYSIHRLILGTHTS 249 (368)
Q Consensus 179 ~~v~~~~~i~~~p-~~~~~l~s~s~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~~--~~v~~v~~~~~~~~~~~~ 249 (368)
..+. .++|+| + +..|+.++.+ ..|.++|+..+. ...+..+. ..+....|+|
T Consensus 188 ~~~~---~~~~sp~d-g~~l~~~~~~~~~~~~~~l~~~d~~~~~--------~~~l~~~~~~~~~~~~~~sp-------- 247 (388)
T 3pe7_A 188 QWLG---HPIYRPYD-DSTVAFCHEGPHDLVDARMWLINEDGTN--------MRKVKTHAEGESCTHEFWVP-------- 247 (388)
T ss_dssp SCEE---EEEEETTE-EEEEEEEECSCTTTSSCSEEEEETTSCC--------CEESCCCCTTEEEEEEEECT--------
T ss_pred cccc---ccEECCCC-CCEEEEEEecCCCCCcceEEEEeCCCCc--------eEEeeeCCCCcccccceECC--------
Confidence 6664 899999 8 7877776653 377888876542 12232232 2466667764
Q ss_pred CCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeee-cCccc---ceeEEEEeCCCCcEEEEe------
Q psy4579 250 DEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIK-INHEG---EVNRARYMPQNPCVIATK------ 319 (368)
Q Consensus 250 d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~-~~h~~---~i~~~~~~p~~~~~lasg------ 319 (368)
|+. .+...+.. ..... ..+..++..+++...... .++.. ....+.|+|+|..++++.
T Consensus 248 dg~-~l~~~~~~--~~~~~----------~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~ 314 (388)
T 3pe7_A 248 DGS-ALVYVSYL--KGSPD----------RFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGY 314 (388)
T ss_dssp TSS-CEEEEEEE--TTCCC----------EEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC----------
T ss_pred CCC-EEEEEecC--CCCCc----------ceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeecccc
Confidence 111 11111110 00000 013444444454322111 11100 012237999996555443
Q ss_pred --cCCCeEEEEECCCCCCCCCCCCCCCCceeeecccC-----------ceeeecceeee
Q psy4579 320 --TPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQK-----------EGLIEGTYNCY 365 (368)
Q Consensus 320 --s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~-----------~V~~l~w~p~~ 365 (368)
..+..|++||+.. .....+..|.. .+.+++|+|+.
T Consensus 315 ~~~~~~~i~~~d~~~-----------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~spDg 362 (388)
T 3pe7_A 315 KIENDPFLYVFNMKN-----------GTQHRVARHDTSWKVFEGDRQVTHPHPSFTPDD 362 (388)
T ss_dssp --CCCCEEEEEETTT-----------TEEEEEEECCCCCCCBTTBSSTTCCCCEECTTS
T ss_pred ccCCCCEEEEEeccC-----------CceEEeccccCcccccccccccCCCCccCCCCC
Confidence 5567999999974 12234555655 57888998864
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=99.33 E-value=1e-11 Score=119.82 Aligned_cols=269 Identities=7% Similarity=-0.017 Sum_probs=147.5
Q ss_pred cCceeeEecCCcccccCC--CCccccccCcceeeeccc-cCCCCCcEEEE---------EEecC--CCccc-cccCCccc
Q psy4579 41 WPSLTAQWLPDVTSVQLP--NEDAQFDASNYDTDKGTH-TSDEQNHLLIA---------SVQLP--NEDAQ-FDASNYDT 105 (368)
Q Consensus 41 ~~~~~~~~~p~~~~l~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~---------~~~~~--~~~~~-~~~~~~~~ 105 (368)
-.+.+++|+++...++.. +.++...+|... ..+.. ...... ..+. ...+. +++.. +..+.
T Consensus 24 ~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~--- 98 (662)
T 3azo_A 24 GRPACVGAVGDEVWWVAPRPAEAGRATLVRRR-ADGAEESALPAP-WNVRNRVFEYSGFPWAGVPRPAGGPLLVFTH--- 98 (662)
T ss_dssp SCCEEEEEETTEEEEEEEETTTTTEEEEEEEC-TTSCEEESSCTT-CCBCCCGGGTCCCCEEEECCSSSSCEEEEEB---
T ss_pred CccceeEEcCCeEEEEecCcccCCcEEEEEEC-CCCCcceeCCCC-ccccccccccCCccceeeeecCCCeEEEEEE---
Confidence 356778899887777665 556666666542 11111 111111 1111 12122 33333 33222
Q ss_pred CCCCcccCCCCC--e-eeeecccc-----CCCCceeeEecCCCCCeeEEEeCC----------CcEEEEeCCCCCCCCcc
Q psy4579 106 DKGGNVQLPNED--A-QFDASNYD-----TDKGGYGLSWNPSLNGYLLSASDD----------HTICLWDINATPKENRV 167 (368)
Q Consensus 106 ~~~g~i~i~~~~--~-~~~~~~~~-----h~~~v~~l~~sp~~~~~lasg~~d----------g~v~iwd~~~~~~~~~~ 167 (368)
..++.|.+++.+ + .....+.. |...+.+++|+|+| +.|+.++.| ..|++||+.+.....
T Consensus 99 ~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg-~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-- 175 (662)
T 3azo_A 99 FGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPER-GEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAAD-- 175 (662)
T ss_dssp TTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTT-TEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTC--
T ss_pred CCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCC-CEEEEEEecccCCCCCCceeEEEEEECCCCcccc--
Confidence 235667777776 3 33344444 66788999999999 889888877 589999998721000
Q ss_pred cccceeee-ccccceecceeeEEeCCCCCeEEEeeCC--------CcEEEEECC-CCCCCCccccceeeeecccccEeEE
Q psy4579 168 IDAKTIFT-GHTAVVEVRYGLSWNPSLNGYLLSASDD--------HTICLWDIN-ATPKENRVIDAKTIFTGHTAVVEDY 237 (368)
Q Consensus 168 ~~~~~~~~-~h~~~v~~~~~i~~~p~~~~~l~s~s~d--------g~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~v~~v 237 (368)
......+. .+...+. .++|+|+ +..|+.++.+ ..|.+||+. ++... .......++...+..+
T Consensus 176 ~~~~~~l~~~~~~~~~---~~~~SpD-G~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~----~~~~l~~~~~~~~~~~ 247 (662)
T 3azo_A 176 RSAVRELSDDAHRFVT---GPRLSPD-GRQAVWLAWDHPRMPWEGTELKTARVTEDGRFA----DTRTLLGGPEEAIAQA 247 (662)
T ss_dssp GGGSEESSCSCSSEEC---CCEECTT-SSEEEEEEECTTCCTTTCEEEEEEEECTTSCEE----EEEEEEEETTBCEEEE
T ss_pred CCceeEEEecCCCccc---CceECCC-CCEEEEEECCCCCCCCCCcEEEEEEECCCCccc----ccEEeCCCCCceEcce
Confidence 00123344 4445553 8999999 8888877755 379999998 34100 1122333456778888
Q ss_pred EEee--ecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCccc--------ceeEEE
Q psy4579 238 SIHR--LILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEG--------EVNRAR 307 (368)
Q Consensus 238 ~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~--------~i~~~~ 307 (368)
.|+| .++.+...++...+|.+ +..+++.. .+...+.. .+..++
T Consensus 248 ~~spdg~l~~~~~~~~~~~l~~~--------------------------~~~~~~~~-~l~~~~~~~~~p~w~~~~~~~~ 300 (662)
T 3azo_A 248 EWAPDGSLIVATDRTGWWNLHRV--------------------------DPATGAAT-QLCRREEEFAGPLWTPGMRWFA 300 (662)
T ss_dssp EECTTSCEEEEECTTSSCEEEEE--------------------------CTTTCCEE-ESSCCSSBSSCCCCSTTCCSEE
T ss_pred EECCCCeEEEEECCCCCeEEEEE--------------------------ECCCCcee-ecccccccccCccccccCceEe
Confidence 8875 12222222222223222 11122211 11111111 156789
Q ss_pred EeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeecccCceeee-ccee
Q psy4579 308 YMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIE-GTYN 363 (368)
Q Consensus 308 ~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l-~w~p 363 (368)
|+|++ .++++++. +.++||.+... ......+..|...+.++ ++++
T Consensus 301 ~~~~~-~~~~~~~~-~~~~l~~~d~~---------~~~~~~l~~~~~~~~~~~s~~~ 346 (662)
T 3azo_A 301 PLANG-LIAVVHGK-GAAVLGILDPE---------SGELVDAAGPWTEWAATLTVSG 346 (662)
T ss_dssp ECTTS-CEEEEEBS-SSCEEEEEETT---------TTEEEECCSSCCEEEEEEEEET
T ss_pred EeCCC-EEEEEEEc-CccEEEEEECC---------CCcEEEecCCCCeEEEEEecCC
Confidence 99998 68888888 99999955421 11234556676666666 4443
|
| >3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.32 E-value=7.5e-12 Score=112.49 Aligned_cols=159 Identities=9% Similarity=0.009 Sum_probs=93.4
Q ss_pred CceeeEecCCcccccCCCCccccccCcceeeecccc--CCCCCcEE-EEEEecCCCccccccC-----------------
Q psy4579 42 PSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHT--SDEQNHLL-IASVQLPNEDAQFDAS----------------- 101 (368)
Q Consensus 42 ~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-i~~~~~~~~~~~~~~~----------------- 101 (368)
++..+.|+||+++|++++.++.+ +.+++..+... ........ .....+.++...+...
T Consensus 82 ~~~~~~~spdg~~l~~~~~~~~l--~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~ 159 (388)
T 3pe7_A 82 NTFGGFLSPDDDALFYVKDGRNL--MRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFH 159 (388)
T ss_dssp CSSSCEECTTSSEEEEEETTTEE--EEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHH
T ss_pred CccceEEcCCCCEEEEEeCCCeE--EEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhh
Confidence 34467899999999998887766 44444433321 11111111 1111112222221100
Q ss_pred -CcccCCCCcccCCCCCeeeeeccccCCCCceeeEecC-CCCCeeEEEeCC------CcEEEEeCCCCCCCCccccccee
Q psy4579 102 -NYDTDKGGNVQLPNEDAQFDASNYDTDKGGYGLSWNP-SLNGYLLSASDD------HTICLWDINATPKENRVIDAKTI 173 (368)
Q Consensus 102 -~~~~~~~g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp-~~~~~lasg~~d------g~v~iwd~~~~~~~~~~~~~~~~ 173 (368)
.+....++.|.+|++.+.....+..+...+..++|+| +| +.|+.++.+ ..|.++|..... ...
T Consensus 160 ~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~dg-~~l~~~~~~~~~~~~~~l~~~d~~~~~--------~~~ 230 (388)
T 3pe7_A 160 EFYFTKPCCRLMRVDLKTGESTVILQENQWLGHPIYRPYDD-STVAFCHEGPHDLVDARMWLINEDGTN--------MRK 230 (388)
T ss_dssp HHGGGCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEE-EEEEEEECSCTTTSSCSEEEEETTSCC--------CEE
T ss_pred hhhccCCcceEEEEECCCCceEEeecCCccccccEECCCCC-CEEEEEEecCCCCCcceEEEEeCCCCc--------eEE
Confidence 0112345678888887655556667778899999999 98 777776653 367777776542 233
Q ss_pred eeccc--cceecceeeEEeCCCCCeEEEeeC-CC----cEEEEECCCCC
Q psy4579 174 FTGHT--AVVEVRYGLSWNPSLNGYLLSASD-DH----TICLWDINATP 215 (368)
Q Consensus 174 ~~~h~--~~v~~~~~i~~~p~~~~~l~s~s~-dg----~i~iwd~~~~~ 215 (368)
+..+. ..+. .+.|+|+ +..|+..+. ++ .|.+||+.++.
T Consensus 231 l~~~~~~~~~~---~~~~spd-g~~l~~~~~~~~~~~~~l~~~d~~~g~ 275 (388)
T 3pe7_A 231 VKTHAEGESCT---HEFWVPD-GSALVYVSYLKGSPDRFIYSADPETLE 275 (388)
T ss_dssp SCCCCTTEEEE---EEEECTT-SSCEEEEEEETTCCCEEEEEECTTTCC
T ss_pred eeeCCCCcccc---cceECCC-CCEEEEEecCCCCCcceEEEEecCCCc
Confidence 43343 2343 7899999 666654433 22 39999998864
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=99.31 E-value=1.7e-11 Score=118.24 Aligned_cols=160 Identities=12% Similarity=0.066 Sum_probs=101.0
Q ss_pred eeEec--CCccc-ccCCCCccccccCcceee--e-ccc-cCCC-C---CcEEEEEEecCCCccccccCCccc------CC
Q psy4579 45 TAQWL--PDVTS-VQLPNEDAQFDASNYDTD--K-GTH-TSDE-Q---NHLLIASVQLPNEDAQFDASNYDT------DK 107 (368)
Q Consensus 45 ~~~~~--p~~~~-l~~~~~~~~~~~~~~~~~--~-~~~-~~~~-~---~~~~i~~~~~~~~~~~~~~~~~~~------~~ 107 (368)
.+.|+ ||++. |++++.. ...+|.++.. . +.. .... . ....+..+.|.+++..+.....+. ..
T Consensus 81 ~~~~~~SPDg~~~la~~~~~-~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~ 159 (662)
T 3azo_A 81 PWAGVPRPAGGPLLVFTHFG-DQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDV 159 (662)
T ss_dssp CEEEECCSSSSCEEEEEBTT-TCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCE
T ss_pred cceeeeecCCCeEEEEEECC-CCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCc
Confidence 56676 99999 8876543 3445666554 1 211 1111 1 234577788866665554443221 11
Q ss_pred CCcccCCCCCe------eeeeccc-cCCCCceeeEecCCCCCeeEEEeCCC--------cEEEEeCC-CCCCCCcccccc
Q psy4579 108 GGNVQLPNEDA------QFDASNY-DTDKGGYGLSWNPSLNGYLLSASDDH--------TICLWDIN-ATPKENRVIDAK 171 (368)
Q Consensus 108 ~g~i~i~~~~~------~~~~~~~-~h~~~v~~l~~sp~~~~~lasg~~dg--------~v~iwd~~-~~~~~~~~~~~~ 171 (368)
...|.+|+.++ .....+. .+...+..++|+|+| +.|+.++.++ .|++||+. ++... ...
T Consensus 160 ~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG-~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~----~~~ 234 (662)
T 3azo_A 160 RRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDG-RQAVWLAWDHPRMPWEGTELKTARVTEDGRFA----DTR 234 (662)
T ss_dssp EEEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTS-SEEEEEEECTTCCTTTCEEEEEEEECTTSCEE----EEE
T ss_pred eeEEEEEECCCCccccCCceeEEEecCCCcccCceECCCC-CEEEEEECCCCCCCCCCcEEEEEEECCCCccc----ccE
Confidence 25788898876 5555555 667788999999999 8888777553 79999998 34100 122
Q ss_pred eeeeccccceecceeeEEeCCCCCeEEEeeCCC--cEEEEECCCC
Q psy4579 172 TIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDH--TICLWDINAT 214 (368)
Q Consensus 172 ~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg--~i~iwd~~~~ 214 (368)
....+|...+. .+.|+|+ +.++++++.++ .|.+||+.++
T Consensus 235 ~l~~~~~~~~~---~~~~spd-g~l~~~~~~~~~~~l~~~~~~~~ 275 (662)
T 3azo_A 235 TLLGGPEEAIA---QAEWAPD-GSLIVATDRTGWWNLHRVDPATG 275 (662)
T ss_dssp EEEEETTBCEE---EEEECTT-SCEEEEECTTSSCEEEEECTTTC
T ss_pred EeCCCCCceEc---ceEECCC-CeEEEEECCCCCeEEEEEECCCC
Confidence 33444566664 9999999 67888888888 5555565443
|
| >1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* | Back alignment and structure |
|---|
Probab=99.31 E-value=3e-11 Score=106.67 Aligned_cols=118 Identities=8% Similarity=0.004 Sum_probs=77.6
Q ss_pred CCCcccCCCCCeeeeeccccCCC--CceeeEecCCCCC-eeEEEeCCCcEEEEeCCCCCCCCcccccceeeec-c-----
Q psy4579 107 KGGNVQLPNEDAQFDASNYDTDK--GGYGLSWNPSLNG-YLLSASDDHTICLWDINATPKENRVIDAKTIFTG-H----- 177 (368)
Q Consensus 107 ~~g~i~i~~~~~~~~~~~~~h~~--~v~~l~~sp~~~~-~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~-h----- 177 (368)
.++.|.+||.............. .+..++|+|++ + +++++..++.|.+||+.+++ ....+.. +
T Consensus 19 ~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg-~~~~v~~~~~~~i~~~d~~t~~-------~~~~~~~~~~~~~~ 90 (349)
T 1jmx_B 19 YPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDN-RTAYVLNNHYGDIYGIDLDTCK-------NTFHANLSSVPGEV 90 (349)
T ss_dssp TTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTS-SEEEEEETTTTEEEEEETTTTE-------EEEEEESCCSTTEE
T ss_pred CCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCC-CEEEEEeCCCCcEEEEeCCCCc-------EEEEEEcccccccc
Confidence 47899999986533333222223 68899999998 6 45666678999999998763 2233332 2
Q ss_pred ccceecceeeEEeCCCCCeEEEeeCC------------CcEEEEECCCCCCCCccccceeeeecccccEeEEEEee
Q psy4579 178 TAVVEVRYGLSWNPSLNGYLLSASDD------------HTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR 241 (368)
Q Consensus 178 ~~~v~~~~~i~~~p~~~~~l~s~s~d------------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~ 241 (368)
...+ .+++|+|+ +.++++++.+ +.|.+||+.++... .....+. +...+.+++|++
T Consensus 91 ~~~~---~~~~~spd-g~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~----~~~~~~~-~~~~~~~~~~s~ 157 (349)
T 1jmx_B 91 GRSM---YSFAISPD-GKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEA----KPVRTFP-MPRQVYLMRAAD 157 (349)
T ss_dssp EECS---SCEEECTT-SSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGB----CCSEEEE-CCSSCCCEEECT
T ss_pred cccc---cceEECCC-CCEEEEEcccccccccccccCCCeEEEEECCCcccc----ceeeecc-CCCcccceeECC
Confidence 1224 38999999 8888888865 89999999874211 1223333 233577777864
|
| >1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1 | Back alignment and structure |
|---|
Probab=99.30 E-value=4.4e-10 Score=96.53 Aligned_cols=237 Identities=11% Similarity=0.144 Sum_probs=140.0
Q ss_pred ceeeEecCCcccccCCCCccccccCcceeeeccccCC----CCCcEEEEEEec-CCCccccccCCcccCCCCcccCCCCC
Q psy4579 43 SLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSD----EQNHLLIASVQL-PNEDAQFDASNYDTDKGGNVQLPNED 117 (368)
Q Consensus 43 ~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~g~i~i~~~~ 117 (368)
+.+++++|+++.+++.+.++.+.+++.+...-..... .........+.+ +..+..+.+ .+ ..++.|.+|+.+
T Consensus 32 p~~v~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~-~~--~~~~~i~~~d~~ 108 (286)
T 1q7f_A 32 PSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVT-ER--SPTHQIQIYNQY 108 (286)
T ss_dssp EEEEEECTTCCEEEEEGGGTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEE-EC--GGGCEEEEECTT
T ss_pred CceEEECCCCCEEEEECCCCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEE-cC--CCCCEEEEECCC
Confidence 5678999999988877777777555432111111000 111122455555 333333322 21 125788999977
Q ss_pred eeeeeccc-cCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeee--ccccceecceeeEEeCCCC
Q psy4579 118 AQFDASNY-DTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFT--GHTAVVEVRYGLSWNPSLN 194 (368)
Q Consensus 118 ~~~~~~~~-~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~--~h~~~v~~~~~i~~~p~~~ 194 (368)
++....+. .+...+.+++++|+| +++++...++.|.+||.... ....+. ++...+. +++++|+ +
T Consensus 109 g~~~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~~g~--------~~~~~~~~~~~~~p~---~i~~~~~-g 175 (286)
T 1q7f_A 109 GQFVRKFGATILQHPRGVTVDNKG-RIIVVECKVMRVIIFDQNGN--------VLHKFGCSKHLEFPN---GVVVNDK-Q 175 (286)
T ss_dssp SCEEEEECTTTCSCEEEEEECTTS-CEEEEETTTTEEEEECTTSC--------EEEEEECTTTCSSEE---EEEECSS-S
T ss_pred CcEEEEecCccCCCceEEEEeCCC-CEEEEECCCCEEEEEcCCCC--------EEEEeCCCCccCCcE---EEEECCC-C
Confidence 76554432 344678999999998 88888888899999996532 223332 2333343 9999998 7
Q ss_pred CeEEEeeCCCcEEEEECCCCCCCCccccceeeeecc--cccEeEEEEeeecccccCCCCccceEEEEeecCCcccccccc
Q psy4579 195 GYLLSASDDHTICLWDINATPKENRVIDAKTIFTGH--TAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDAS 272 (368)
Q Consensus 195 ~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~--~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 272 (368)
.++++.+.++.|++||.... .+..+..+ ......+++++ + ..+|+...
T Consensus 176 ~l~v~~~~~~~i~~~~~~g~--------~~~~~~~~g~~~~p~~i~~d~--------~--G~l~v~~~------------ 225 (286)
T 1q7f_A 176 EIFISDNRAHCVKVFNYEGQ--------YLRQIGGEGITNYPIGVGINS--------N--GEILIADN------------ 225 (286)
T ss_dssp EEEEEEGGGTEEEEEETTCC--------EEEEESCTTTSCSEEEEEECT--------T--CCEEEEEC------------
T ss_pred CEEEEECCCCEEEEEcCCCC--------EEEEEccCCccCCCcEEEECC--------C--CCEEEEeC------------
Confidence 78888888999999997542 23333322 24556666653 1 13333321
Q ss_pred cccCCCC-CcccccCCCCceeeeeec-CcccceeEEEEeCCCCcEEEEecCCCeEEEEECCC
Q psy4579 273 NYDTDKG-DFGGFGSVSGKIEIEIKI-NHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 273 ~~d~~~~-~~~~~~~~~~~~~~~~~~-~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
..+ .+..++. .++....+.. .....+.+++++|++ .++++ +.|++|++|++..
T Consensus 226 ----~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~~g-~l~vs-~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 226 ----HNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALMDDG-SVVLA-SKDYRLYIYRYVQ 280 (286)
T ss_dssp ----SSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEETTT-EEEEE-ETTTEEEEEECSC
T ss_pred ----CCCEEEEEECC-CCCEEEEEcccCCCCcceeEEECCCC-cEEEE-CCCCeEEEEEccc
Confidence 000 2223332 2333333331 122347799999999 67777 5799999999864
|
| >3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A | Back alignment and structure |
|---|
Probab=99.29 E-value=7e-11 Score=105.19 Aligned_cols=216 Identities=10% Similarity=0.019 Sum_probs=113.6
Q ss_pred CCCcccCCCCCe---e--eeeccccCCCCceeeEecCCCCCeeEEEe-CCCcEEEEeCCCCCCCCcccccceeeec----
Q psy4579 107 KGGNVQLPNEDA---Q--FDASNYDTDKGGYGLSWNPSLNGYLLSAS-DDHTICLWDINATPKENRVIDAKTIFTG---- 176 (368)
Q Consensus 107 ~~g~i~i~~~~~---~--~~~~~~~h~~~v~~l~~sp~~~~~lasg~-~dg~v~iwd~~~~~~~~~~~~~~~~~~~---- 176 (368)
.+|.|.+|+.+. . .......+......+++ ++ +.|++++ .++.|.+|++.......... ......+
T Consensus 73 ~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg-~~l~~~~~~~~~v~~~~~~~~g~~~~~~-~~~~~~g~~~~ 148 (361)
T 3scy_A 73 DQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NG-KNIVTANYSGGSITVFPIGQDGALLPAS-DVIEFKGSGPD 148 (361)
T ss_dssp TTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CS-SEEEEEETTTTEEEEEEBCTTSCBCSCS-EEEECCCCCSC
T ss_pred CCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CC-CEEEEEECCCCEEEEEEeCCCCcCcccc-eeEEccCCCCC
Confidence 458898887653 2 22223335556777887 66 6555555 68999999997543211100 0001111
Q ss_pred ----cccceecceeeEEeCCCCCeE-EEeeCCCcEEEEECCCCCCCC--ccccc----eeeeecccccEeEEEEeee---
Q psy4579 177 ----HTAVVEVRYGLSWNPSLNGYL-LSASDDHTICLWDINATPKEN--RVIDA----KTIFTGHTAVVEDYSIHRL--- 242 (368)
Q Consensus 177 ----h~~~v~~~~~i~~~p~~~~~l-~s~s~dg~i~iwd~~~~~~~~--~~~~~----~~~~~~~~~~v~~v~~~~~--- 242 (368)
+...+ .+++|+|+ ++++ +++..++.|.+|++....... +.+.. ......+......++|+|.
T Consensus 149 ~~~~~~~~~---~~~~~spd-g~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~ 224 (361)
T 3scy_A 149 KERQTMPHL---HCVRITPD-GKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKF 224 (361)
T ss_dssp TTTCSSCCE---EEEEECTT-SSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSE
T ss_pred ccccCCCcc---eEEEECCC-CCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCE
Confidence 11123 27999999 7755 455568999999987643100 00000 0111223344667788751
Q ss_pred cccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCcee--eee--ecCcccceeEEEEeCCCCcEEEE
Q psy4579 243 ILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIE--IEI--KINHEGEVNRARYMPQNPCVIAT 318 (368)
Q Consensus 243 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~--~~~--~~~h~~~i~~~~~~p~~~~~las 318 (368)
++.+...++. +.+|+..++... ... ...+......++|+|++..++++
T Consensus 225 l~v~~~~~~~----------------------------v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~ 276 (361)
T 3scy_A 225 AYLINEIGGT----------------------------VIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYAS 276 (361)
T ss_dssp EEEEETTTCE----------------------------EEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEE
T ss_pred EEEEcCCCCe----------------------------EEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEE
Confidence 2222212222 222222223221 111 11334456899999999666666
Q ss_pred ecC-CCeEEEEECCCCCCCCCCCCCCCCceeeecccCceeeecceeee
Q psy4579 319 KTP-SSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 319 gs~-Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p~~ 365 (368)
... ++.|.+|++.... +....+..+.. ...+.+++|+|+.
T Consensus 277 ~~~~~~~i~v~~~~~~~------g~~~~~~~~~~-g~~~~~~~~spdg 317 (361)
T 3scy_A 277 NRLKADGVAIFKVDETN------GTLTKVGYQLT-GIHPRNFIITPNG 317 (361)
T ss_dssp ECSSSCEEEEEEECTTT------CCEEEEEEEEC-SSCCCEEEECTTS
T ss_pred CCCCCCEEEEEEEcCCC------CcEEEeeEecC-CCCCceEEECCCC
Confidence 666 6999999996311 11222222333 4467788888864
|
| >1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1 | Back alignment and structure |
|---|
Probab=99.28 E-value=1e-11 Score=110.93 Aligned_cols=156 Identities=13% Similarity=0.189 Sum_probs=91.3
Q ss_pred CceeeEecCCcccccCCCCccccccCcceee-eccccC--C--CCCcEEEEEEecCCCccc-cc-cCC------cccC--
Q psy4579 42 PSLTAQWLPDVTSVQLPNEDAQFDASNYDTD-KGTHTS--D--EQNHLLIASVQLPNEDAQ-FD-ASN------YDTD-- 106 (368)
Q Consensus 42 ~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~-~~~~~~--~--~~~~~~i~~~~~~~~~~~-~~-~~~------~~~~-- 106 (368)
++..++|+||+++|++++.+ .+ ..|++. .|.... . .... ...+.+.+++.. +. ... |. .
T Consensus 41 ~~~~~a~spdg~~l~~~~~~-~v--~~~~~~~~g~~~~~~~~~~~g~--~~~~~~spdg~~l~~~~~~~~~~~~~~-~~~ 114 (365)
T 1jof_A 41 PISWMTFDHERKNIYGAAMK-KW--SSFAVKSPTEIVHEASHPIGGH--PRANDADTNTRAIFLLAAKQPPYAVYA-NPF 114 (365)
T ss_dssp CCSEEEECTTSSEEEEEEBT-EE--EEEEEEETTEEEEEEEEECCSS--GGGGCTTSCCEEEEEEECSSTTCCEEE-EEE
T ss_pred CCcEEEECCCCCEEEEEccc-eE--EEEEECCCCCEEEeeEeecCCC--CccEEECCCCCEEEEEEecCCcceecc-cee
Confidence 35569999999998887776 55 444443 332210 0 0000 111233333331 11 111 11 0
Q ss_pred --CCCcccCCCCC--eeeeeccc----cCCCCceeeEecCCCCCeeEEEe-CCCcEEEEeCC-CCCCCCcccccceeee-
Q psy4579 107 --KGGNVQLPNED--AQFDASNY----DTDKGGYGLSWNPSLNGYLLSAS-DDHTICLWDIN-ATPKENRVIDAKTIFT- 175 (368)
Q Consensus 107 --~~g~i~i~~~~--~~~~~~~~----~h~~~v~~l~~sp~~~~~lasg~-~dg~v~iwd~~-~~~~~~~~~~~~~~~~- 175 (368)
.+|.+.+|+.+ ++...... .+...+.+++|+|+| ++|+++. .++.|++||+. +++. .....+.
T Consensus 115 ~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG-~~l~~~~~~~~~v~~~~~~~~g~~-----~~~~~~~~ 188 (365)
T 1jof_A 115 YKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTE-TYLYSADLTANKLWTHRKLASGEV-----ELVGSVDA 188 (365)
T ss_dssp SSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTS-SEEEEEETTTTEEEEEEECTTSCE-----EEEEEEEC
T ss_pred ecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCC-CEEEEEcCCCCEEEEEEECCCCCE-----EEeeeEec
Confidence 47888898864 33322221 355679999999999 7777665 46899999997 4431 1122232
Q ss_pred -ccccceecceeeEEeCCCCCeEEEeeC-CCcEEEEECCC
Q psy4579 176 -GHTAVVEVRYGLSWNPSLNGYLLSASD-DHTICLWDINA 213 (368)
Q Consensus 176 -~h~~~v~~~~~i~~~p~~~~~l~s~s~-dg~i~iwd~~~ 213 (368)
.|...++ .++|+|+ ++++++++. ++.|.+|++..
T Consensus 189 ~~~g~~p~---~~~~spd-g~~l~v~~~~~~~v~v~~~~~ 224 (365)
T 1jof_A 189 PDPGDHPR---WVAMHPT-GNYLYALMEAGNRICEYVIDP 224 (365)
T ss_dssp SSTTCCEE---EEEECTT-SSEEEEEETTTTEEEEEEECT
T ss_pred CCCCCCCC---EeEECCC-CCEEEEEECCCCeEEEEEEeC
Confidence 2334454 8999999 877777664 78999998753
|
| >3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=99.17 E-value=4.4e-11 Score=107.61 Aligned_cols=155 Identities=10% Similarity=0.048 Sum_probs=84.3
Q ss_pred ceeeEecCCcccccCCCC-ccccccCcceeeeccccCC-CCCcEEEEEEecCCCccccccCCcccCCCCcccCCCCCeee
Q psy4579 43 SLTAQWLPDVTSVQLPNE-DAQFDASNYDTDKGTHTSD-EQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQF 120 (368)
Q Consensus 43 ~~~~~~~p~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~ 120 (368)
+.+++|+|||++|++... ++...++.++...+..... ...........|.+++..+... ..++.+.+|+.++..
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~----~~~~~l~~~d~~~~~ 113 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYV----KNELNLMKVDLETLE 113 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEE----ETTTEEEEEETTTCC
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEE----EcCCcEEEEECCCCC
Confidence 567899999999887643 3433446555554432111 1110001112333333333221 124568888876533
Q ss_pred eecccc-CCCCcee-------------------eEecCCCCCeeEEE-----eCCCcEEEEeCCCCCCCCcccccceeee
Q psy4579 121 DASNYD-TDKGGYG-------------------LSWNPSLNGYLLSA-----SDDHTICLWDINATPKENRVIDAKTIFT 175 (368)
Q Consensus 121 ~~~~~~-h~~~v~~-------------------l~~sp~~~~~lasg-----~~dg~v~iwd~~~~~~~~~~~~~~~~~~ 175 (368)
...+.. +...... +.|+|++ +.++.+ ..+..|.+||+.++. ...+.
T Consensus 114 ~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg-~~~~~~~~~~~~~~~~l~~~d~~~g~--------~~~~~ 184 (396)
T 3c5m_A 114 EQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLT-SWEKFAEFYHTNPTCRLIKVDIETGE--------LEVIH 184 (396)
T ss_dssp EEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCC-SHHHHHHHHHTCCCEEEEEEETTTCC--------EEEEE
T ss_pred cEEEEecccccCCCCCEEEeccCCccccccccccccCCCC-cceeeeeeccCCCcceEEEEECCCCc--------EEeec
Confidence 222222 2222222 4678887 666544 456789999998763 23333
Q ss_pred ccccceecceeeEEeC-CCCCeEEEeeCC------CcEEEEECCCC
Q psy4579 176 GHTAVVEVRYGLSWNP-SLNGYLLSASDD------HTICLWDINAT 214 (368)
Q Consensus 176 ~h~~~v~~~~~i~~~p-~~~~~l~s~s~d------g~i~iwd~~~~ 214 (368)
.+...+. .+.|+| + +..|+..+.+ ..|.+||+..+
T Consensus 185 ~~~~~~~---~~~~sp~d-g~~l~~~~~~~~~~~~~~l~~~d~~~~ 226 (396)
T 3c5m_A 185 QDTAWLG---HPIYRPFD-DSTVGFCHEGPHDLVDARMWLVNEDGS 226 (396)
T ss_dssp EESSCEE---EEEEETTE-EEEEEEEECSCSSSCSCCCEEEETTSC
T ss_pred cCCcccc---cceECCCC-CCEEEEEecCCCCCCCceEEEEECCCC
Confidence 4555564 899999 5 6666665543 36888888654
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=99.13 E-value=3.7e-10 Score=110.41 Aligned_cols=235 Identities=13% Similarity=0.022 Sum_probs=127.8
Q ss_pred CCcccCCCCCeeee-eccccCCCC-----ceeeEecCCCCCeeEEEeCC---------CcEEEEeCCCCCCCCcccccce
Q psy4579 108 GGNVQLPNEDAQFD-ASNYDTDKG-----GYGLSWNPSLNGYLLSASDD---------HTICLWDINATPKENRVIDAKT 172 (368)
Q Consensus 108 ~g~i~i~~~~~~~~-~~~~~h~~~-----v~~l~~sp~~~~~lasg~~d---------g~v~iwd~~~~~~~~~~~~~~~ 172 (368)
+|.|++|+..+... ..+.+|... ...++|||+| +.|+.++.+ +.+.+||+.++. ..
T Consensus 35 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg-~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~--------~~ 105 (740)
T 4a5s_A 35 ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDG-QFILLEYNYVKQWRHSYTASYDIYDLNKRQ--------LI 105 (740)
T ss_dssp TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTS-SEEEEEEEEEECSSSCEEEEEEEEETTTTE--------EC
T ss_pred CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCC-CEEEEEECCeeeEEEccceEEEEEECCCCc--------EE
Confidence 78999999865332 233344432 2347889999 889888876 566799999874 23
Q ss_pred eeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccc--cceeeeecccccE---------eEEEEee
Q psy4579 173 IFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVI--DAKTIFTGHTAVV---------EDYSIHR 241 (368)
Q Consensus 173 ~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~--~~~~~~~~~~~~v---------~~v~~~~ 241 (368)
.+..|...+. ..+|||+ ++.||.+ .|+.|.+||+.++....-.. .....+.++...| ..+.|+|
T Consensus 106 ~l~~~~~~~~---~~~~SPd-G~~la~~-~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSp 180 (740)
T 4a5s_A 106 TEERIPNNTQ---WVTWSPV-GHKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSP 180 (740)
T ss_dssp CSSCCCTTEE---EEEECSS-TTCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECT
T ss_pred EcccCCCcce---eeEECCC-CCEEEEE-ECCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECC
Confidence 4556666674 9999999 8888887 47899999998764210000 0000112222111 2367775
Q ss_pred --ecccccC-CCCccceEEEEeecCCc-c-cccccccc-----cCCCCCcccccCCC---Cc--eeeeeec-----Cccc
Q psy4579 242 --LILGTHT-SDEQNHLLIASVQLPNE-D-AQFDASNY-----DTDKGDFGGFGSVS---GK--IEIEIKI-----NHEG 301 (368)
Q Consensus 242 --~~~~~~~-~d~~~~~~~~~~~~~~~-~-~~~~~~~~-----d~~~~~~~~~~~~~---~~--~~~~~~~-----~h~~ 301 (368)
..++... .+..+.+|......... . .......| ......+.++++.+ ++ ....+.. +|..
T Consensus 181 Dg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~ 260 (740)
T 4a5s_A 181 NGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDH 260 (740)
T ss_dssp TSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCE
T ss_pred CCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCe
Confidence 1122211 12223333322111100 0 00000000 01112355666666 52 1222221 3778
Q ss_pred ceeEEEEeCCCCcEEEEe----cCCCeEEEEECCCCCCCCCCCCC----CCCceee--ecccCcee-----eecceeee
Q psy4579 302 EVNRARYMPQNPCVIATK----TPSSDVLVFDYTKHPSKPDPNGE----CHPDLRL--RGHQKEGL-----IEGTYNCY 365 (368)
Q Consensus 302 ~i~~~~~~p~~~~~lasg----s~Dg~i~iwd~~~~~~~~~~~~~----~~~~~~~--~gh~~~V~-----~l~w~p~~ 365 (368)
.+..++|+|++. +++.. +.+..|.+||+.. ++ +..+..+ .+|...|. ..+|+|+.
T Consensus 261 ~~~~~~wspdg~-~~~~~~~r~~~~~~i~~~d~~t--------g~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG 330 (740)
T 4a5s_A 261 YLCDVTWATQER-ISLQWLRRIQNYSVMDICDYDE--------SSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDG 330 (740)
T ss_dssp EEEEEEEEETTE-EEEEEEESSTTEEEEEEEEEET--------TTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTS
T ss_pred EEEEEEEeCCCe-EEEEEeCCCCCEEEEEEEECCC--------CccccceeEEEEeeeccCCceEccCcCCCceEcCCC
Confidence 899999999994 44443 3345799999975 22 2222233 45665554 67888864
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=99.11 E-value=4.7e-10 Score=108.88 Aligned_cols=246 Identities=11% Similarity=-0.008 Sum_probs=136.8
Q ss_pred ccCceeeEecCCccccc-----CCCCccccccCcceeeecccc-CCCCCcEEEEEEecCCCccccccCCcccC-------
Q psy4579 40 EWPSLTAQWLPDVTSVQ-----LPNEDAQFDASNYDTDKGTHT-SDEQNHLLIASVQLPNEDAQFDASNYDTD------- 106 (368)
Q Consensus 40 ~~~~~~~~~~p~~~~l~-----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~------- 106 (368)
.+.+.++.|+|||++|| .|+++..+ +.+++..|... .+.........+.|.+++..+....++..
T Consensus 120 ~~~~~~~~~SPDG~~la~~~~~~G~~~~~i--~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~ 197 (695)
T 2bkl_A 120 TVSLGTWAVSWDGKKVAFAQKPNAADEAVL--HVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDE 197 (695)
T ss_dssp CEEEEEEEECTTSSEEEEEEEETTCSCCEE--EEEETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGG
T ss_pred CEEEEEEEECCCCCEEEEEECCCCCceEEE--EEEECCCCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCCcccc
Confidence 45678899999999999 56555566 55566655543 22111000134556555554443333211
Q ss_pred --CCCcccCCCCCee-----eeeccccCCCCceeeEecCCCCCeeEEEeCCC----cEEEEeCCCCCCCCcccccceeee
Q psy4579 107 --KGGNVQLPNEDAQ-----FDASNYDTDKGGYGLSWNPSLNGYLLSASDDH----TICLWDINATPKENRVIDAKTIFT 175 (368)
Q Consensus 107 --~~g~i~i~~~~~~-----~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg----~v~iwd~~~~~~~~~~~~~~~~~~ 175 (368)
....|.+|++.+. .+.....|...+.++.|+|+| ++|+.++.++ .|.+++..++ ....+.
T Consensus 198 ~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG-~~l~~~~~~~~~~~~l~~~~~~~~--------~~~~l~ 268 (695)
T 2bkl_A 198 RPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDG-KYLFVYILRGWSENDVYWKRPGEK--------DFRLLV 268 (695)
T ss_dssp GGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTS-CCEEEEEEETTTEEEEEEECTTCS--------SCEEEE
T ss_pred CCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCC-CEEEEEEeCCCCceEEEEEcCCCC--------ceEEee
Confidence 1223778887642 233334466788999999999 7777777665 5666654433 234455
Q ss_pred ccccceecceeeEEeCCCCCeEEEee---CCCcEEEEECCCCCCCCccccceeeeecc-cccEeEEEEee-ecccccCCC
Q psy4579 176 GHTAVVEVRYGLSWNPSLNGYLLSAS---DDHTICLWDINATPKENRVIDAKTIFTGH-TAVVEDYSIHR-LILGTHTSD 250 (368)
Q Consensus 176 ~h~~~v~~~~~i~~~p~~~~~l~s~s---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~v~~v~~~~-~~~~~~~~d 250 (368)
.+...+. ...| ++ +.++++.. .++.|.+||+.++... .....+..+ ...+..+++.. .++.+...+
T Consensus 269 ~~~~~~~---~~~~-~~-g~l~~~s~~~~~~~~l~~~d~~~~~~~----~~~~l~~~~~~~~l~~~~~~~~~lv~~~~~d 339 (695)
T 2bkl_A 269 KGVGAKY---EVHA-WK-DRFYVLTDEGAPRQRVFEVDPAKPARA----SWKEIVPEDSSASLLSVSIVGGHLSLEYLKD 339 (695)
T ss_dssp ECSSCCE---EEEE-ET-TEEEEEECTTCTTCEEEEEBTTBCSGG----GCEEEECCCSSCEEEEEEEETTEEEEEEEET
T ss_pred cCCCceE---EEEe-cC-CcEEEEECCCCCCCEEEEEeCCCCCcc----CCeEEecCCCCCeEEEEEEECCEEEEEEEEC
Confidence 5555443 5556 45 33555554 2578999998775310 011222222 34566666652 233333444
Q ss_pred CccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEe---cCCCeEEE
Q psy4579 251 EQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATK---TPSSDVLV 327 (368)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasg---s~Dg~i~i 327 (368)
+..++++... .++....+...+.+.|..+.++|+++.++++. ...++|++
T Consensus 340 g~~~l~~~~~---------------------------~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~ 392 (695)
T 2bkl_A 340 ATSEVRVATL---------------------------KGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYK 392 (695)
T ss_dssp TEEEEEEEET---------------------------TCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEE
T ss_pred CEEEEEEEeC---------------------------CCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEE
Confidence 4444443321 12222222222356778888999885555443 34578999
Q ss_pred EECCC
Q psy4579 328 FDYTK 332 (368)
Q Consensus 328 wd~~~ 332 (368)
||+..
T Consensus 393 ~d~~~ 397 (695)
T 2bkl_A 393 TSVST 397 (695)
T ss_dssp EETTT
T ss_pred EECCC
Confidence 99864
|
| >1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1 | Back alignment and structure |
|---|
Probab=99.11 E-value=9.1e-10 Score=98.26 Aligned_cols=115 Identities=10% Similarity=0.060 Sum_probs=70.7
Q ss_pred cccCCCCC--eeeeeccccC--CCCceeeEecCCCCC--eeEEEe-------------CCCcEEEEeCCCCCCCCccccc
Q psy4579 110 NVQLPNED--AQFDASNYDT--DKGGYGLSWNPSLNG--YLLSAS-------------DDHTICLWDINATPKENRVIDA 170 (368)
Q Consensus 110 ~i~i~~~~--~~~~~~~~~h--~~~v~~l~~sp~~~~--~lasg~-------------~dg~v~iwd~~~~~~~~~~~~~ 170 (368)
.|.+|+.+ ++... ...+ .+.+.+++|+|+| + +++++. .+|++.+|++..... .
T Consensus 61 ~v~~~~~~~~g~~~~-~~~~~~~g~~~~~~~spdg-~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~------~ 132 (365)
T 1jof_A 61 KWSSFAVKSPTEIVH-EASHPIGGHPRANDADTNT-RAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGK------L 132 (365)
T ss_dssp EEEEEEEEETTEEEE-EEEEECCSSGGGGCTTSCC-EEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCC------E
T ss_pred eEEEEEECCCCCEEE-eeEeecCCCCccEEECCCC-CEEEEEEecCCcceeccceeecCCceEEEEccCCCCc------C
Confidence 78889874 33322 1112 1347789999999 7 355653 689999999974221 1
Q ss_pred ceeee----ccccceecceeeEEeCCCCCeEEEee-CCCcEEEEECC-CCCCCCccccceeeee--cccccEeEEEEee
Q psy4579 171 KTIFT----GHTAVVEVRYGLSWNPSLNGYLLSAS-DDHTICLWDIN-ATPKENRVIDAKTIFT--GHTAVVEDYSIHR 241 (368)
Q Consensus 171 ~~~~~----~h~~~v~~~~~i~~~p~~~~~l~s~s-~dg~i~iwd~~-~~~~~~~~~~~~~~~~--~~~~~v~~v~~~~ 241 (368)
...+. .+...+. +++|+|+ ++++++++ .++.|.+||+. ++.. .....+. .|...+..++|+|
T Consensus 133 ~~~~~~~~~~~~~~~~---~~~~spd-G~~l~~~~~~~~~v~~~~~~~~g~~-----~~~~~~~~~~~g~~p~~~~~sp 202 (365)
T 1jof_A 133 EKNVQNYEYQENTGIH---GMVFDPT-ETYLYSADLTANKLWTHRKLASGEV-----ELVGSVDAPDPGDHPRWVAMHP 202 (365)
T ss_dssp EEEEEEEECCTTCCEE---EEEECTT-SSEEEEEETTTTEEEEEEECTTSCE-----EEEEEEECSSTTCCEEEEEECT
T ss_pred cceEeeEEeCCCCcce---EEEECCC-CCEEEEEcCCCCEEEEEEECCCCCE-----EEeeeEecCCCCCCCCEeEECC
Confidence 11222 2334453 9999999 77777665 46899999997 4421 1122232 2345677888875
|
| >2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A | Back alignment and structure |
|---|
Probab=99.11 E-value=8.7e-09 Score=90.42 Aligned_cols=241 Identities=10% Similarity=0.073 Sum_probs=128.6
Q ss_pred CceeeEecCCcccccCCCCccccccCcceeeeccccCCCCCcEEEEEEecCCCccccccCCcccCCCCcccCCCCCeeee
Q psy4579 42 PSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQFD 121 (368)
Q Consensus 42 ~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~ 121 (368)
++.++.|+|++..++..+.++.+..|. ...-..... ....+..+.+.+++. +.... ..++.|.+|+.++...
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~--~~~~~~~~~~~~~g~-l~~~~---~~~~~i~~~d~~~~~~ 78 (333)
T 2dg1_A 7 DLPTLFYSGKSNSAVPIISESELQTIT--AEPWLEISK--KGLQLEGLNFDRQGQ-LFLLD---VFEGNIFKINPETKEI 78 (333)
T ss_dssp CCCBCCSCGGGGCSSCCCCGGGSCEEE--CEEEEEEES--SCCCEEEEEECTTSC-EEEEE---TTTCEEEEECTTTCCE
T ss_pred ccceeeecCCccceeEEeecccCcccc--cceeEEEec--cCccccCcEECCCCC-EEEEE---CCCCEEEEEeCCCCcE
Confidence 456788999998888777777775541 111000011 111234555644433 22221 2467899999875433
Q ss_pred ecc-ccCCCCceeeEecCCCCCeeEEEeCC----CcEEEEeCCCCCCCCcccccceeee--ccccceecceeeEEeCCCC
Q psy4579 122 ASN-YDTDKGGYGLSWNPSLNGYLLSASDD----HTICLWDINATPKENRVIDAKTIFT--GHTAVVEVRYGLSWNPSLN 194 (368)
Q Consensus 122 ~~~-~~h~~~v~~l~~sp~~~~~lasg~~d----g~v~iwd~~~~~~~~~~~~~~~~~~--~h~~~v~~~~~i~~~p~~~ 194 (368)
... ..+...+.+++++|+| +++++...+ +.|.+||..++.. ...+. .+...+. ++++.|+ +
T Consensus 79 ~~~~~~~~~~~~~i~~~~dg-~l~v~~~~~~~~~~~i~~~d~~~~~~-------~~~~~~~~~~~~~~---~i~~d~~-g 146 (333)
T 2dg1_A 79 KRPFVSHKANPAAIKIHKDG-RLFVCYLGDFKSTGGIFAATENGDNL-------QDIIEDLSTAYCID---DMVFDSK-G 146 (333)
T ss_dssp EEEEECSSSSEEEEEECTTS-CEEEEECTTSSSCCEEEEECTTSCSC-------EEEECSSSSCCCEE---EEEECTT-S
T ss_pred EEEeeCCCCCcceEEECCCC-cEEEEeCCCCCCCceEEEEeCCCCEE-------EEEEccCccCCccc---ceEECCC-C
Confidence 332 2566789999999998 777777666 6899999876532 11221 2233453 8999998 7
Q ss_pred CeEEEeeC------CCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeeecccccCCCCccceEEEEeecCCcccc
Q psy4579 195 GYLLSASD------DHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQ 268 (368)
Q Consensus 195 ~~l~s~s~------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 268 (368)
.++++... .+.|..+|..++. ...+.......+.++|++. ...+++.... ..
T Consensus 147 ~l~v~~~~~~~~~~~~~l~~~~~~~~~--------~~~~~~~~~~~~~i~~~~d---------g~~l~v~~~~----~~- 204 (333)
T 2dg1_A 147 GFYFTDFRGYSTNPLGGVYYVSPDFRT--------VTPIIQNISVANGIALSTD---------EKVLWVTETT----AN- 204 (333)
T ss_dssp CEEEEECCCBTTBCCEEEEEECTTSCC--------EEEEEEEESSEEEEEECTT---------SSEEEEEEGG----GT-
T ss_pred CEEEEeccccccCCCceEEEEeCCCCE--------EEEeecCCCcccceEECCC---------CCEEEEEeCC----CC-
Confidence 77776654 3456666654431 1222222234566777541 0112221100 00
Q ss_pred cccccccCCC-CC-cccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECC
Q psy4579 269 FDASNYDTDK-GD-FGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYT 331 (368)
Q Consensus 269 ~~~~~~d~~~-~~-~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~ 331 (368)
.+..+|... +. +..+ ......... ++ ..+..+++++++ +++++...++.|.+||..
T Consensus 205 -~i~~~d~~~~g~~~~~~---~~~~~~~~~-~~-~~~~~i~~d~~G-~l~v~~~~~~~v~~~d~~ 262 (333)
T 2dg1_A 205 -RLHRIALEDDGVTIQPF---GATIPYYFT-GH-EGPDSCCIDSDD-NLYVAMYGQGRVLVFNKR 262 (333)
T ss_dssp -EEEEEEECTTSSSEEEE---EEEEEEECC-SS-SEEEEEEEBTTC-CEEEEEETTTEEEEECTT
T ss_pred -eEEEEEecCCCcCcccc---cceEEEecC-CC-CCCCceEECCCC-CEEEEEcCCCEEEEECCC
Confidence 001111110 00 0000 000000111 22 467889999999 577676778999999974
|
| >2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=99.10 E-value=5.1e-10 Score=98.90 Aligned_cols=215 Identities=8% Similarity=0.061 Sum_probs=115.5
Q ss_pred EEEEecCCCccccccCCccc-CCCCcccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCC--------------
Q psy4579 86 IASVQLPNEDAQFDASNYDT-DKGGNVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDD-------------- 150 (368)
Q Consensus 86 i~~~~~~~~~~~~~~~~~~~-~~~g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~d-------------- 150 (368)
+....|.+++..+....... .+...|.+|+.++.....+..+.. +.+++|+|+| +.|+.++.+
T Consensus 61 ~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~-~~~~~wspdg-~~l~~~~~~~~~~~~~~~~~~~~ 138 (347)
T 2gop_A 61 ATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKN-IRSLEWNEDS-RKLLIVGFKRREDEDFIFEDDVP 138 (347)
T ss_dssp CEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESE-EEEEEECTTS-SEEEEEEECCCC---------CC
T ss_pred CCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCC-ccceeECCCC-CEEEEEEccCCCcCCcEEEcccc
Confidence 44556665554444332211 012246667766544444444444 9999999999 777777632
Q ss_pred -------------CcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCC-------cEEEEE
Q psy4579 151 -------------HTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDH-------TICLWD 210 (368)
Q Consensus 151 -------------g~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg-------~i~iwd 210 (368)
..|.+||+.++. ....+.. . .+. .+.|+|+ + ++++++.++ ...||.
T Consensus 139 ~~~~g~~~~~~~~~~l~~~d~~~~~-------~~~~l~~-~-~~~---~~~~spd-g-~~~~~~~~~~~~~~~~~~~l~~ 204 (347)
T 2gop_A 139 AWFDDLGFFDGEKTTFWIFDTESEE-------VIEEFEK-P-RFS---SGIWHRD-K-IVVNVPHREIIPQYFKFWDIYI 204 (347)
T ss_dssp CC---------CEEEEEEEETTTTE-------EEEEEEE-E-TTC---EEEEETT-E-EEEEEECCCSSCCSSCCEEEEE
T ss_pred eeecCcccccCccceEEEEECCCCe-------EEeeecC-C-Ccc---cccCCCC-e-EEEEEecccccccccccccEEE
Confidence 568889987753 2133333 2 453 8999998 6 777776542 345554
Q ss_pred CCCCCCCCccccceeeeecccccEeEEEEeeecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCc
Q psy4579 211 INATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGK 290 (368)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 290 (368)
+.++. ...+..+ ..+..+ +| |+. .+...... .... ......+..++ +++
T Consensus 205 ~d~~~--------~~~l~~~-~~~~~~--sp--------dg~-~l~~~~~~--~~~~-------~~~~~~l~~~d--~~~ 253 (347)
T 2gop_A 205 WEDGK--------EEKMFEK-VSFYAV--DS--------DGE-RILLYGKP--EKKY-------MSEHNKLYIYD--GKE 253 (347)
T ss_dssp EETTE--------EEEEEEE-ESEEEE--EE--------CSS-CEEEEECC--SSSC-------CCSSCEEEEEC--SSC
T ss_pred eCCCc--------eEEeccC-cceeeE--CC--------CCC-EEEEEEcc--ccCC-------ccccceEEEEC--CCc
Confidence 44321 1222222 222222 22 111 12111110 0000 00112233334 233
Q ss_pred eeeeeecCcccceeE-EEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeecccCceeeeccee
Q psy4579 291 IEIEIKINHEGEVNR-ARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYN 363 (368)
Q Consensus 291 ~~~~~~~~h~~~i~~-~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p 363 (368)
. ..+...|...+.. +.|+ ++ ++++++.|+.++|| +.. + . ...+..+...|.+++|+|
T Consensus 254 ~-~~l~~~~~~~~~~~~~~s-dg--~~~~~~~~~~~~l~-~~~--------g--~-~~~~~~~~~~v~~~~~s~ 311 (347)
T 2gop_A 254 V-MGILDEVDRGVGQAKIKD-GK--VYFTLFEEGSVNLY-IWD--------G--E-IKPIAKGRHWIMGFDVDE 311 (347)
T ss_dssp E-EESSTTCCSEEEEEEEET-TE--EEEEEEETTEEEEE-EES--------S--S-EEEEECSSSEEEEEEESS
T ss_pred e-EeccccCCcccCCccEEc-Cc--EEEEEecCCcEEEE-EcC--------C--c-eEEEecCCCeEEeeeeeC
Confidence 2 2233356777886 8998 76 77788999999999 862 1 1 123445677888999987
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=99.10 E-value=1.7e-09 Score=105.25 Aligned_cols=248 Identities=10% Similarity=-0.016 Sum_probs=138.5
Q ss_pred cCceeeEecCCcccccCCCCccc---cccCcceeeeccccCCCCCcEEEEEEecCCCccccccCCcccC-----------
Q psy4579 41 WPSLTAQWLPDVTSVQLPNEDAQ---FDASNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTD----------- 106 (368)
Q Consensus 41 ~~~~~~~~~p~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~----------- 106 (368)
+.+..++|+|||++|++++.++. ..++.+++..|...........+..+.|.+++..+.....+..
T Consensus 125 ~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~ 204 (710)
T 2xdw_A 125 VALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETST 204 (710)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCC
T ss_pred EEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCcccceEEEEeCCCEEEEEEECCcccccccccccc
Confidence 45678999999999997654331 1335556555543221000111234556555444433322211
Q ss_pred -CCCcccCCCCCeee-----eeccccCCCCceeeEecCCCCCeeEEEeC-----CCcEEEEeCCC------CCCCCcccc
Q psy4579 107 -KGGNVQLPNEDAQF-----DASNYDTDKGGYGLSWNPSLNGYLLSASD-----DHTICLWDINA------TPKENRVID 169 (368)
Q Consensus 107 -~~g~i~i~~~~~~~-----~~~~~~h~~~v~~l~~sp~~~~~lasg~~-----dg~v~iwd~~~------~~~~~~~~~ 169 (368)
....|.+|++.+.. +.....|...+..+.|+|+| ++|+.++. +..|.+||+.+ +..
T Consensus 205 ~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg-~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~------ 277 (710)
T 2xdw_A 205 NLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDG-RYVLLSIREGCDPVNRLWYCDLQQESNGITGIL------ 277 (710)
T ss_dssp CCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTS-CEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSC------
T ss_pred CCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCC-CEEEEEEEccCCCccEEEEEECcccccccCCcc------
Confidence 12237777775422 22233355667899999999 77777664 56899999976 321
Q ss_pred cceeeeccccceecceeeEEeCCCCCeEEEeeCC----CcEEEEECCCCCCCCccccceeeeecccc--cEeEEEEee--
Q psy4579 170 AKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDD----HTICLWDINATPKENRVIDAKTIFTGHTA--VVEDYSIHR-- 241 (368)
Q Consensus 170 ~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~--~v~~v~~~~-- 241 (368)
....+..+...+ .-.|+|+ +..|+..+.+ +.|.+||+.++... ....+..|.. .+..++|.+
T Consensus 278 ~~~~l~~~~~~~----~~~~s~d-g~~l~~~s~~~~~~~~l~~~d~~~~~~~-----~~~~l~~~~~~~~~~~~~~~~~~ 347 (710)
T 2xdw_A 278 KWVKLIDNFEGE----YDYVTNE-GTVFTFKTNRHSPNYRLINIDFTDPEES-----KWKVLVPEHEKDVLEWVACVRSN 347 (710)
T ss_dssp CCEEEECSSSSC----EEEEEEE-TTEEEEEECTTCTTCEEEEEETTSCCGG-----GCEEEECCCSSCEEEEEEEETTT
T ss_pred ceEEeeCCCCcE----EEEEecc-CCEEEEEECCCCCCCEEEEEeCCCCCcc-----cceeccCCCCCCeEEEEEEEcCC
Confidence 235566666655 2358888 6655554442 36999998775310 1133333433 566777752
Q ss_pred ecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEec-
Q psy4579 242 LILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKT- 320 (368)
Q Consensus 242 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs- 320 (368)
.++.+...++..++++ ++..+++....+. .+.+.|..+.++|++..++++.+
T Consensus 348 ~lv~~~~~~g~~~l~~--------------------------~~~~~g~~~~~l~-~~~~~v~~~~~s~d~~~l~~~~ss 400 (710)
T 2xdw_A 348 FLVLCYLHDVKNTLQL--------------------------HDLATGALLKIFP-LEVGSVVGYSGQKKDTEIFYQFTS 400 (710)
T ss_dssp EEEEEEEETTEEEEEE--------------------------EETTTCCEEEEEC-CCSSEEEEEECCTTCSEEEEEEEC
T ss_pred EEEEEEEECCEEEEEE--------------------------EECCCCCEEEecC-CCCceEEEEecCCCCCEEEEEEeC
Confidence 2222222222223322 2222344333333 45778889999999865654433
Q ss_pred --CCCeEEEEECCC
Q psy4579 321 --PSSDVLVFDYTK 332 (368)
Q Consensus 321 --~Dg~i~iwd~~~ 332 (368)
..++|++||+..
T Consensus 401 ~~~P~~i~~~d~~t 414 (710)
T 2xdw_A 401 FLSPGIIYHCDLTK 414 (710)
T ss_dssp SSCCCEEEEEETTS
T ss_pred CCCCCEEEEEECCC
Confidence 458899999865
|
| >1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A | Back alignment and structure |
|---|
Probab=99.07 E-value=8.3e-09 Score=87.57 Aligned_cols=236 Identities=5% Similarity=-0.043 Sum_probs=131.2
Q ss_pred ceeeEecCCccccc-CCCCccccccCcceeeeccccC-CCCCcEEEEEEecCCCccccccCCcccCCCCcccCCCCCeee
Q psy4579 43 SLTAQWLPDVTSVQ-LPNEDAQFDASNYDTDKGTHTS-DEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQF 120 (368)
Q Consensus 43 ~~~~~~~p~~~~l~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~ 120 (368)
...+.+.|+++.++ ..+.++.+.. ++...+.... .......+..+.+.+++. +..+. .++.|..|+.++..
T Consensus 26 p~~i~~~~~g~l~v~~~~~~~~i~~--~~~~~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~----~~~~i~~~d~~~~~ 98 (270)
T 1rwi_B 26 PSGVAVDSAGNVYVTSEGMYGRVVK--LATGSTGTTVLPFNGLYQPQGLAVDGAGT-VYVTD----FNNRVVTLAAGSNN 98 (270)
T ss_dssp EEEEEECTTCCEEEEECSSSCEEEE--ECC-----EECCCCSCCSCCCEEECTTCC-EEEEE----TTTEEEEECTTCSC
T ss_pred ccceEECCCCCEEEEccCCCCcEEE--ecCCCcccceEeeCCcCCcceeEECCCCC-EEEEc----CCCEEEEEeCCCce
Confidence 44689999999776 5466666633 3332221111 011111122333433322 22221 25678888877654
Q ss_pred eeccc-cCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEE
Q psy4579 121 DASNY-DTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLS 199 (368)
Q Consensus 121 ~~~~~-~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s 199 (368)
..... .....+.+++++|+| +++++...++.|.+|+..+... ..........+ .++++.|+ +.++++
T Consensus 99 ~~~~~~~~~~~p~~i~~~~~g-~l~v~~~~~~~i~~~~~~~~~~-------~~~~~~~~~~p---~~i~~~~~-g~l~v~ 166 (270)
T 1rwi_B 99 QTVLPFDGLNYPEGLAVDTQG-AVYVADRGNNRVVKLAAGSKTQ-------TVLPFTGLNDP---DGVAVDNS-GNVYVT 166 (270)
T ss_dssp CEECCCCSCSSEEEEEECTTC-CEEEEEGGGTEEEEECTTCCSC-------EECCCCSCCSC---CCEEECTT-CCEEEE
T ss_pred EeeeecCCcCCCcceEECCCC-CEEEEECCCCEEEEEECCCcee-------EeeccccCCCc---eeEEEeCC-CCEEEE
Confidence 33322 233578999999998 7888877889999997554321 11111222233 38999998 777777
Q ss_pred eeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeeecccccCCCCccceEEEEeecCCcccccccccccCCCC
Q psy4579 200 ASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKG 279 (368)
Q Consensus 200 ~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 279 (368)
...++.|.+||...... ......+......+++++ + ..+|+... ..+
T Consensus 167 ~~~~~~i~~~~~~~~~~-------~~~~~~~~~~p~~i~~d~--------~--g~l~v~~~----------------~~~ 213 (270)
T 1rwi_B 167 DTDNNRVVKLEAESNNQ-------VVLPFTDITAPWGIAVDE--------A--GTVYVTEH----------------NTN 213 (270)
T ss_dssp EGGGTEEEEECTTTCCE-------EECCCSSCCSEEEEEECT--------T--CCEEEEET----------------TTS
T ss_pred ECCCCEEEEEecCCCce-------EeecccCCCCceEEEECC--------C--CCEEEEEC----------------CCC
Confidence 77788999999876521 111111223455666653 1 13444331 011
Q ss_pred CcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCC
Q psy4579 280 DFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
.+..++....... .....+...+.+++++|+| .++++.+.++.|+++++..
T Consensus 214 ~v~~~~~~~~~~~-~~~~~~~~~p~~i~~~~~g-~l~v~~~~~~~v~~~~~~~ 264 (270)
T 1rwi_B 214 QVVKLLAGSTTST-VLPFTGLNTPLAVAVDSDR-TVYVADRGNDRVVKLTSLE 264 (270)
T ss_dssp CEEEECTTCSCCE-ECCCCSCSCEEEEEECTTC-CEEEEEGGGTEEEEECCCG
T ss_pred cEEEEcCCCCcce-eeccCCCCCceeEEECCCC-CEEEEECCCCEEEEEcCCC
Confidence 1222222222111 1221344578999999999 6888889999999999864
|
| >1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1 | Back alignment and structure |
|---|
Probab=99.04 E-value=3.5e-08 Score=84.55 Aligned_cols=198 Identities=9% Similarity=0.059 Sum_probs=116.9
Q ss_pred CCCcccCCCCCeeeeeccc------cCCCCceeeEe-cCCCCCeeEEEeC-CCcEEEEeCCCCCCCCcccccceeee-cc
Q psy4579 107 KGGNVQLPNEDAQFDASNY------DTDKGGYGLSW-NPSLNGYLLSASD-DHTICLWDINATPKENRVIDAKTIFT-GH 177 (368)
Q Consensus 107 ~~g~i~i~~~~~~~~~~~~------~h~~~v~~l~~-sp~~~~~lasg~~-dg~v~iwd~~~~~~~~~~~~~~~~~~-~h 177 (368)
.++.|.+|+.+++....+. +|...+.++++ .+++ .++++... ++.|++||.. +. ....+. .+
T Consensus 49 ~~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g-~l~v~~~~~~~~i~~~d~~-g~-------~~~~~~~~~ 119 (286)
T 1q7f_A 49 NNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSG-DIIVTERSPTHQIQIYNQY-GQ-------FVRKFGATI 119 (286)
T ss_dssp GGTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTT-EEEEEECGGGCEEEEECTT-SC-------EEEEECTTT
T ss_pred CCCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCC-eEEEEcCCCCCEEEEECCC-Cc-------EEEEecCcc
Confidence 3678999998765544332 24457889999 4666 66666643 8999999943 32 223332 22
Q ss_pred ccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeee--cccccEeEEEEeeecccccCCCCccce
Q psy4579 178 TAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFT--GHTAVVEDYSIHRLILGTHTSDEQNHL 255 (368)
Q Consensus 178 ~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~--~~~~~v~~v~~~~~~~~~~~~d~~~~~ 255 (368)
...+. ++++.|+ +.++++...++.|.+||.... ....+. ++...+..+++++. ..+
T Consensus 120 ~~~~~---~i~~~~~-g~l~v~~~~~~~i~~~~~~g~--------~~~~~~~~~~~~~p~~i~~~~~----------g~l 177 (286)
T 1q7f_A 120 LQHPR---GVTVDNK-GRIIVVECKVMRVIIFDQNGN--------VLHKFGCSKHLEFPNGVVVNDK----------QEI 177 (286)
T ss_dssp CSCEE---EEEECTT-SCEEEEETTTTEEEEECTTSC--------EEEEEECTTTCSSEEEEEECSS----------SEE
T ss_pred CCCce---EEEEeCC-CCEEEEECCCCEEEEEcCCCC--------EEEEeCCCCccCCcEEEEECCC----------CCE
Confidence 23343 9999998 788888888899999996532 123332 23345677777641 123
Q ss_pred EEEEeecCCcccccccccccCCCCCcccccCCCCceeeeee-cCcccceeEEEEeCCCCcEEEEecCCC-eEEEEECCCC
Q psy4579 256 LIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIK-INHEGEVNRARYMPQNPCVIATKTPSS-DVLVFDYTKH 333 (368)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~-~~h~~~i~~~~~~p~~~~~lasgs~Dg-~i~iwd~~~~ 333 (368)
|+... ..+.+..++. .++....+. .++...+..++++|++ +++++...++ .|.+||...
T Consensus 178 ~v~~~----------------~~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G-~l~v~~~~~~~~i~~~~~~g- 238 (286)
T 1q7f_A 178 FISDN----------------RAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNG-EILIADNHNNFNLTIFTQDG- 238 (286)
T ss_dssp EEEEG----------------GGTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTTC-CEEEEECSSSCEEEEECTTS-
T ss_pred EEEEC----------------CCCEEEEEcC-CCCEEEEEccCCccCCCcEEEECCCC-CEEEEeCCCCEEEEEECCCC-
Confidence 33221 0111222222 122222222 1234578899999999 6877877775 999999642
Q ss_pred CCCCCCCCCCCCceeeeccc--Cceeeecceee
Q psy4579 334 PSKPDPNGECHPDLRLRGHQ--KEGLIEGTYNC 364 (368)
Q Consensus 334 ~~~~~~~~~~~~~~~~~gh~--~~V~~l~w~p~ 364 (368)
..+..+..+. ..+.+++++|+
T Consensus 239 ----------~~~~~~~~~~~~~~~~~i~~~~~ 261 (286)
T 1q7f_A 239 ----------QLISALESKVKHAQCFDVALMDD 261 (286)
T ss_dssp ----------CEEEEEEESSCCSCEEEEEEETT
T ss_pred ----------CEEEEEcccCCCCcceeEEECCC
Confidence 2233343332 24668888775
|
| >2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ... | Back alignment and structure |
|---|
Probab=99.03 E-value=8.3e-09 Score=91.85 Aligned_cols=94 Identities=7% Similarity=0.061 Sum_probs=64.6
Q ss_pred CCcccCCCCCe-eeeeccccCCCCceeeEecCCCCCeeEEEe----------CCCcEEEEeCCCCCCCCcccccceeeec
Q psy4579 108 GGNVQLPNEDA-QFDASNYDTDKGGYGLSWNPSLNGYLLSAS----------DDHTICLWDINATPKENRVIDAKTIFTG 176 (368)
Q Consensus 108 ~g~i~i~~~~~-~~~~~~~~h~~~v~~l~~sp~~~~~lasg~----------~dg~v~iwd~~~~~~~~~~~~~~~~~~~ 176 (368)
|+.|.+||... +....+..+..+ .++|+|++ +++.+++ .+++|.+||..+.+ ....+..
T Consensus 30 d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg-~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~-------~~~~i~~ 99 (361)
T 2oiz_A 30 ESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDG-KKIYTMTTYHERITRGKRSDVVEVWDADKLT-------FEKEISL 99 (361)
T ss_dssp GCEEEEEETTTCCEEEEEECCEEE--EEEECTTS-SEEEEEEEEETTSSSSCEEEEEEEEETTTCC-------EEEEEEE
T ss_pred cCeEEEEECCCCeEEEEecCCCCC--ceEECCCC-CEEEEEEecccccccCCCCCEEEEEECcCCc-------EEEEEEc
Confidence 67788888643 333333334444 89999999 8777775 36789999998754 2333332
Q ss_pred c------ccceecceeeEEeCCCCCeEEEeeC--CCcEEEEECCCCC
Q psy4579 177 H------TAVVEVRYGLSWNPSLNGYLLSASD--DHTICLWDINATP 215 (368)
Q Consensus 177 h------~~~v~~~~~i~~~p~~~~~l~s~s~--dg~i~iwd~~~~~ 215 (368)
. .... ..++++|+ +++|++++. +++|.+||+.++.
T Consensus 100 ~~~~~~~g~~p---~~i~~spd-g~~l~v~n~~~~~~v~v~d~~~~~ 142 (361)
T 2oiz_A 100 PPKRVQGLNYD---GLFRQTTD-GKFIVLQNASPATSIGIVDVAKGD 142 (361)
T ss_dssp CTTBCCBCCCG---GGEEECTT-SSEEEEEEESSSEEEEEEETTTTE
T ss_pred CccccccCCCc---ceEEECCC-CCEEEEECCCCCCeEEEEECCCCc
Confidence 1 1223 28999999 888888764 6899999998763
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=99.02 E-value=7.8e-09 Score=100.60 Aligned_cols=230 Identities=5% Similarity=-0.073 Sum_probs=127.5
Q ss_pred EEEEEEecCCCccccccCCcc-cCCCCcccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCCCc----------
Q psy4579 84 LLIASVQLPNEDAQFDASNYD-TDKGGNVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHT---------- 152 (368)
Q Consensus 84 ~~i~~~~~~~~~~~~~~~~~~-~~~~g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~---------- 152 (368)
..+..+.|++++..+...... .+....|++|++.+............+..++|+|+| +.|+.++.++.
T Consensus 125 ~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg-~~l~~~~~~~~~~~~~~~~~~ 203 (710)
T 2xdw_A 125 VALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDG-KGMFYNAYPQQDGKSDGTETS 203 (710)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEECSCCEEECTTS-SEEEEEECCCCSSCCSSSCCC
T ss_pred EEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCcccceEEEEeCC-CEEEEEEECCccccccccccc
Confidence 467777887665544332211 111137999998764333222222237889999999 88888887766
Q ss_pred ------EEEEeCCCCCCCCcccccceeeec--cccceecceeeEEeCCCCCeEEEeeC-----CCcEEEEECCC------
Q psy4579 153 ------ICLWDINATPKENRVIDAKTIFTG--HTAVVEVRYGLSWNPSLNGYLLSASD-----DHTICLWDINA------ 213 (368)
Q Consensus 153 ------v~iwd~~~~~~~~~~~~~~~~~~~--h~~~v~~~~~i~~~p~~~~~l~s~s~-----dg~i~iwd~~~------ 213 (368)
|++|++.++... ....+.. |...+ ..+.|+|+ +.+|+.++. +..|.+||+.+
T Consensus 204 ~~~~~~v~~~~l~t~~~~-----~~~v~~~~~~~~~~---~~~~~SpD-g~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~ 274 (710)
T 2xdw_A 204 TNLHQKLYYHVLGTDQSE-----DILCAEFPDEPKWM---GGAELSDD-GRYVLLSIREGCDPVNRLWYCDLQQESNGIT 274 (710)
T ss_dssp CCCCCEEEEEETTSCGGG-----CEEEECCTTCTTCE---EEEEECTT-SCEEEEEEECSSSSCCEEEEEEGGGSSSSSC
T ss_pred cCCCCEEEEEECCCCccc-----ceEEeccCCCCeEE---EEEEEcCC-CCEEEEEEEccCCCccEEEEEECcccccccC
Confidence 999999776421 1122232 34434 38999999 787777654 56899999876
Q ss_pred CCCCCccccceeeeecccccEeEEEEeeecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCce--
Q psy4579 214 TPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKI-- 291 (368)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-- 291 (368)
+.. ....+..+...+.. .|.+. + ..+++.+. .+...+.+..++..++..
T Consensus 275 ~~~------~~~~l~~~~~~~~~-~~s~d--------g-~~l~~~s~-------------~~~~~~~l~~~d~~~~~~~~ 325 (710)
T 2xdw_A 275 GIL------KWVKLIDNFEGEYD-YVTNE--------G-TVFTFKTN-------------RHSPNYRLINIDFTDPEESK 325 (710)
T ss_dssp SSC------CCEEEECSSSSCEE-EEEEE--------T-TEEEEEEC-------------TTCTTCEEEEEETTSCCGGG
T ss_pred Ccc------ceEEeeCCCCcEEE-EEecc--------C-CEEEEEEC-------------CCCCCCEEEEEeCCCCCccc
Confidence 311 12334444444433 23320 0 11111110 011112233333333321
Q ss_pred eeeeecCccc--ceeEEEEeCCCCcEEEEecCCCeEE--EEECCCCCCCCCCCCCCCCceeeecccCceeeecceee
Q psy4579 292 EIEIKINHEG--EVNRARYMPQNPCVIATKTPSSDVL--VFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYNC 364 (368)
Q Consensus 292 ~~~~~~~h~~--~i~~~~~~p~~~~~lasgs~Dg~i~--iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p~ 364 (368)
...+. .|.. .+..++|++++ .++++...|+..+ +||+.. ...+..+..+.+.|.+++++|.
T Consensus 326 ~~~l~-~~~~~~~~~~~~~~~~~-~lv~~~~~~g~~~l~~~~~~~----------g~~~~~l~~~~~~v~~~~~s~d 390 (710)
T 2xdw_A 326 WKVLV-PEHEKDVLEWVACVRSN-FLVLCYLHDVKNTLQLHDLAT----------GALLKIFPLEVGSVVGYSGQKK 390 (710)
T ss_dssp CEEEE-CCCSSCEEEEEEEETTT-EEEEEEEETTEEEEEEEETTT----------CCEEEEECCCSSEEEEEECCTT
T ss_pred ceecc-CCCCCCeEEEEEEEcCC-EEEEEEEECCEEEEEEEECCC----------CCEEEecCCCCceEEEEecCCC
Confidence 12222 3433 67889999776 7888989998654 556532 2223345566777788888764
|
| >1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C* | Back alignment and structure |
|---|
Probab=99.02 E-value=2.8e-09 Score=94.82 Aligned_cols=175 Identities=10% Similarity=0.023 Sum_probs=111.1
Q ss_pred CceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCC----CCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCc
Q psy4579 130 GGYGLSWNPSLNGYLLSASDDHTICLWDINATPK----ENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHT 205 (368)
Q Consensus 130 ~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~----~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~ 205 (368)
.++.|++++.. .++++|+.++. .+|++..... .....++.... .+.. |. .++| + +..|+++ .++.
T Consensus 39 ~~nlLais~~~-gll~a~~~~~l-~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~---~l~f--d-~~~L~v~-~~~~ 107 (388)
T 1xip_A 39 SLQNLDISNSK-SLFVAASGSKA-VVGELQLLRDHITSDSTPLTFKWEK-EIPD-VI---FVCF--H-GDQVLVS-TRNA 107 (388)
T ss_dssp CCBCEEEETTT-TEEEEEETTEE-EEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EE---EEEE--E-TTEEEEE-ESSE
T ss_pred cccEEEEcCCC-CEEEEeCCCEE-EEEEhhHhhhhhccccccccceEEe-eCCC-ee---EEEE--C-CCEEEEE-cCCc
Confidence 68999999998 89999998855 4598764320 00001122222 3555 74 9999 5 8889888 8899
Q ss_pred EEEEECCCCCCCCccccceeeeecccccEeEEEEeeecccccCCCCccceEEEEeecCCcccccccccccCCCCCccccc
Q psy4579 206 ICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFG 285 (368)
Q Consensus 206 i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 285 (368)
|++||+++... ......|...+.++.+.+.-++.... .|.+.+|+
T Consensus 108 l~v~dv~sl~~-------~~~~~~~~~~v~~i~~~~p~~av~~~----------------------------dG~L~v~d 152 (388)
T 1xip_A 108 LYSLDLEELSE-------FRTVTSFEKPVFQLKNVNNTLVILNS----------------------------VNDLSALD 152 (388)
T ss_dssp EEEEESSSTTC-------EEEEEECSSCEEEEEECSSEEEEEET----------------------------TSEEEEEE
T ss_pred EEEEEchhhhc-------cCccceeecceeeEEecCCCEEEEEC----------------------------CCCEEEEE
Confidence 99999987632 23344456667666554211222222 23344444
Q ss_pred CCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceee------e---cccCce
Q psy4579 286 SVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRL------R---GHQKEG 356 (368)
Q Consensus 286 ~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~------~---gh~~~V 356 (368)
+..+... .+...|+|++|+|+| ++.|..||++++|+..... ..+...+ . +|...|
T Consensus 153 l~~~~~~-----~~~~~Vs~v~WSpkG---~~vg~~dg~i~~~~~~~~~--------~~~k~~I~~Pp~~~~~~~~~~~V 216 (388)
T 1xip_A 153 LRTKSTK-----QLAQNVTSFDVTNSQ---LAVLLKDRSFQSFAWRNGE--------MEKQFEFSLPSELEELPVEEYSP 216 (388)
T ss_dssp TTTCCEE-----EEEESEEEEEECSSE---EEEEETTSCEEEEEEETTE--------EEEEEEECCCHHHHTSCTTTSEE
T ss_pred ccCCccc-----cccCCceEEEEcCCc---eEEEEcCCcEEEEcCCCcc--------ccccceecCCcccccccCCCeeE
Confidence 4444432 145689999999999 4567899999999886421 1001122 2 478899
Q ss_pred eeecceeeee
Q psy4579 357 LIEGTYNCYL 366 (368)
Q Consensus 357 ~~l~w~p~~~ 366 (368)
.++.|.+++.
T Consensus 217 ~sI~wl~~~~ 226 (388)
T 1xip_A 217 LSVTILSPQD 226 (388)
T ss_dssp EEEEESSSSE
T ss_pred EEEEEecCCe
Confidence 9999998763
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=99.01 E-value=3.4e-09 Score=103.61 Aligned_cols=248 Identities=13% Similarity=0.069 Sum_probs=135.6
Q ss_pred cCceeeEecCCcccccCCCCc-cc--cccCcceeeeccccCCCCCcEEEEEEecCCCccccccCCcccC----------C
Q psy4579 41 WPSLTAQWLPDVTSVQLPNED-AQ--FDASNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTD----------K 107 (368)
Q Consensus 41 ~~~~~~~~~p~~~~l~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~----------~ 107 (368)
+.+..+.|+|||++|++++.+ |. ..++.+++..|...........+..+.|.++ ..+....++.. .
T Consensus 163 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~ 241 (741)
T 1yr2_A 163 TALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNY 241 (741)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCCC--------CCC
T ss_pred EEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCCCceeccEEEECC-CEEEEEEecCcccccccccCCC
Confidence 567789999999999987554 22 3346666665543221000011134455444 43333322211 1
Q ss_pred CCcccCCCCCee-----eeeccccCCCCceeeEecCCCCCeeEEEeCCC-----cEEEEeCCCCCCCCcccccceeeecc
Q psy4579 108 GGNVQLPNEDAQ-----FDASNYDTDKGGYGLSWNPSLNGYLLSASDDH-----TICLWDINATPKENRVIDAKTIFTGH 177 (368)
Q Consensus 108 ~g~i~i~~~~~~-----~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg-----~v~iwd~~~~~~~~~~~~~~~~~~~h 177 (368)
...|.+|++.+. .+.....+...+..+.|+|+| ++|+..+.++ .|++||+.++... ....+..+
T Consensus 242 ~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG-~~l~~~~~~~~~~~~~l~~~d~~~~~~~-----~~~~l~~~ 315 (741)
T 1yr2_A 242 NQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDG-RWVVITSSEGTDPVNTVHVARVTNGKIG-----PVTALIPD 315 (741)
T ss_dssp CCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTS-CEEEEEEECTTCSCCEEEEEEEETTEEC-----CCEEEECS
T ss_pred CCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCC-CEEEEEEEccCCCcceEEEEECCCCCCc-----ccEEecCC
Confidence 234667776432 222223344468899999999 8777776544 7999999765210 12445555
Q ss_pred ccceecceeeEEeCCCCCeEEEeeC----CCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee-ecccccCCCCc
Q psy4579 178 TAVVEVRYGLSWNPSLNGYLLSASD----DHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR-LILGTHTSDEQ 252 (368)
Q Consensus 178 ~~~v~~~~~i~~~p~~~~~l~s~s~----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~-~~~~~~~~d~~ 252 (368)
..... .. +.|+ ++.|+..+. ++.|.+||+.++. . .....+..+...+..+++.. .++.+...++.
T Consensus 316 ~~~~~---~~-~~~d-g~~l~~~s~~~~~~~~l~~~d~~~~~--~---~~~~l~~~~~~~l~~~~~~~~~lv~~~~~dg~ 385 (741)
T 1yr2_A 316 LKAQW---DF-VDGV-GDQLWFVSGDGAPLKKIVRVDLSGST--P---RFDTVVPESKDNLESVGIAGNRLFASYIHDAK 385 (741)
T ss_dssp SSSCE---EE-EEEE-TTEEEEEECTTCTTCEEEEEECSSSS--C---EEEEEECCCSSEEEEEEEEBTEEEEEEEETTE
T ss_pred CCceE---EE-Eecc-CCEEEEEECCCCCCCEEEEEeCCCCc--c---ccEEEecCCCCeEEEEEEECCEEEEEEEECCE
Confidence 54442 33 3477 676666665 3459999987642 0 11223334444555666642 23333333333
Q ss_pred cceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEe---cCCCeEEEEE
Q psy4579 253 NHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATK---TPSSDVLVFD 329 (368)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasg---s~Dg~i~iwd 329 (368)
.++++... .+.....+...+.+.|..+.++|+++.++.+. ...++|++||
T Consensus 386 ~~l~~~~~---------------------------~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d 438 (741)
T 1yr2_A 386 SQVLAFDL---------------------------DGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALD 438 (741)
T ss_dssp EEEEEEET---------------------------TSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEE
T ss_pred EEEEEEeC---------------------------CCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEE
Confidence 44433321 12222223223466788999999986555443 3458899999
Q ss_pred CCC
Q psy4579 330 YTK 332 (368)
Q Consensus 330 ~~~ 332 (368)
+..
T Consensus 439 ~~t 441 (741)
T 1yr2_A 439 PAT 441 (741)
T ss_dssp TTT
T ss_pred CCC
Confidence 864
|
| >3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A* | Back alignment and structure |
|---|
Probab=98.99 E-value=6.2e-08 Score=85.01 Aligned_cols=184 Identities=13% Similarity=0.120 Sum_probs=110.7
Q ss_pred CCceeeEecCCCCCeeEEEeCC------------------------CcEEEEeCCCCCCCCcccccceeee-ccccceec
Q psy4579 129 KGGYGLSWNPSLNGYLLSASDD------------------------HTICLWDINATPKENRVIDAKTIFT-GHTAVVEV 183 (368)
Q Consensus 129 ~~v~~l~~sp~~~~~lasg~~d------------------------g~v~iwd~~~~~~~~~~~~~~~~~~-~h~~~v~~ 183 (368)
+.+.+++++|+| +++++...+ +.|.+||..++. ....+. ++-...
T Consensus 24 ~~v~~va~d~~G-~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~-------~~~~~~~~~~~~p-- 93 (329)
T 3fvz_A 24 GQVSGVALDSKN-NLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAE-------ILQSSGKNLFYLP-- 93 (329)
T ss_dssp SCEEEEEECTTC-CEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCC-------EEEEECTTTCSSE--
T ss_pred CCceEEEECCCC-CEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCe-------EEeccCCCccCCc--
Confidence 578999999998 888888777 479999987664 222232 222334
Q ss_pred ceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeee---------ecccccEeEEEEeeecccccCCCCccc
Q psy4579 184 RYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIF---------TGHTAVVEDYSIHRLILGTHTSDEQNH 254 (368)
Q Consensus 184 ~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~---------~~~~~~v~~v~~~~~~~~~~~~d~~~~ 254 (368)
..++++|+ ++++++.+.++.|++||...... .+..+ .++......+++++. ...
T Consensus 94 -~gia~d~~-g~l~v~d~~~~~v~~~~~~g~~~------~~~~~~~~~~~g~~~~~~~~P~~ia~~~~---------~g~ 156 (329)
T 3fvz_A 94 -HGLSIDTD-GNYWVTDVALHQVFKLDPHSKEG------PLLILGRSMQPGSDQNHFCQPTDVAVEPS---------TGA 156 (329)
T ss_dssp -EEEEECTT-SCEEEEETTTTEEEEECTTCSSC------CSEEESBTTBCCCSTTCCSSEEEEEECTT---------TCC
T ss_pred -eEEEECCC-CCEEEEECCCCEEEEEeCCCCeE------EEEEecccCCCCCCccccCCCcEEEEeCC---------CCe
Confidence 38999998 88889988999999999865311 12222 123334566777640 012
Q ss_pred eEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeee---------cCcccceeEEEEeCCCCcEEEEecCCCeE
Q psy4579 255 LLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIK---------INHEGEVNRARYMPQNPCVIATKTPSSDV 325 (368)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~---------~~h~~~i~~~~~~p~~~~~lasgs~Dg~i 325 (368)
+++... + ..+.+..++ ..+.....+. .++......++++|++..++++...++.|
T Consensus 157 lyv~d~-------------~--~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I 220 (329)
T 3fvz_A 157 VFVSDG-------------Y--CNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRI 220 (329)
T ss_dssp EEEEEC-------------S--SCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEE
T ss_pred EEEEeC-------------C--CCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEE
Confidence 222210 0 011122222 1222222221 12334578999999944888899999999
Q ss_pred EEEECCCCCCCCCCCCCCCCceeeecccCceeeeccee
Q psy4579 326 LVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYN 363 (368)
Q Consensus 326 ~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p 363 (368)
++||... ++........++...+++++|+|
T Consensus 221 ~~~~~~~--------G~~~~~~~~~~~~~~~~~~~~~p 250 (329)
T 3fvz_A 221 QCFKTDT--------KEFVREIKHASFGRNVFAISYIP 250 (329)
T ss_dssp EEEETTT--------CCEEEEECCTTTTTCEEEEEEET
T ss_pred EEEECCC--------CcEEEEEeccccCCCcceeeecC
Confidence 9999863 11211111235666788888887
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=98.95 E-value=2.6e-08 Score=96.65 Aligned_cols=229 Identities=7% Similarity=-0.009 Sum_probs=126.2
Q ss_pred EEEEEEecCCCccccccCCc-ccCCCCcccCCCCCeeeeeccccCCCC--ceeeEecCCCCCeeEEEeCCCc--------
Q psy4579 84 LLIASVQLPNEDAQFDASNY-DTDKGGNVQLPNEDAQFDASNYDTDKG--GYGLSWNPSLNGYLLSASDDHT-------- 152 (368)
Q Consensus 84 ~~i~~~~~~~~~~~~~~~~~-~~~~~g~i~i~~~~~~~~~~~~~h~~~--v~~l~~sp~~~~~lasg~~dg~-------- 152 (368)
..+..+.|++++..+..+.. ..+.+..|++|++++..... ..+-.. ...++|+|+| +.|+.++.|..
T Consensus 121 ~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~-~~~~~~~~~~~~~wspDg-~~l~~~~~d~~~~~~~~~~ 198 (695)
T 2bkl_A 121 VSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK-VDVIEGGKYATPKWTPDS-KGFYYEWLPTDPSIKVDER 198 (695)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS-SCCBSCCTTCCCEECTTS-SEEEEEECCCCTTSCGGGG
T ss_pred EEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC-CcccCcccccceEEecCC-CEEEEEEecCCCCCccccC
Confidence 46778888766554442221 12235789999987654331 112222 2789999999 88999888776
Q ss_pred -----EEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCC----cEEEEECCCCCCCCccccc
Q psy4579 153 -----ICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDH----TICLWDINATPKENRVIDA 223 (368)
Q Consensus 153 -----v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg----~i~iwd~~~~~~~~~~~~~ 223 (368)
|++|++.++..... .+.....|...+ .++.|+|+ +.+|+.++.++ .|.+||..++.
T Consensus 199 ~~~~~v~~~~l~t~~~~~~---lv~~~~~~~~~~---~~~~~SpD-G~~l~~~~~~~~~~~~l~~~~~~~~~-------- 263 (695)
T 2bkl_A 199 PGYTTIRYHTLGTEPSKDT---VVHERTGDPTTF---LQSDLSRD-GKYLFVYILRGWSENDVYWKRPGEKD-------- 263 (695)
T ss_dssp GGGCEEEEEETTSCGGGCE---EEECCCCCTTCE---EEEEECTT-SCCEEEEEEETTTEEEEEEECTTCSS--------
T ss_pred CCCCEEEEEECCCCchhce---EEEecCCCCEEE---EEEEECCC-CCEEEEEEeCCCCceEEEEEcCCCCc--------
Confidence 99999987642110 111222344455 38999999 77777776665 56666543321
Q ss_pred eeeeecccccEeEEEEeeecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCce--eeeeecCc-c
Q psy4579 224 KTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKI--EIEIKINH-E 300 (368)
Q Consensus 224 ~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~--~~~~~~~h-~ 300 (368)
...+..+...+....++ ++. +++.+ ..+...+.+..++..++.. ...+...+ .
T Consensus 264 ~~~l~~~~~~~~~~~~~---------~g~--l~~~s-------------~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~ 319 (695)
T 2bkl_A 264 FRLLVKGVGAKYEVHAW---------KDR--FYVLT-------------DEGAPRQRVFEVDPAKPARASWKEIVPEDSS 319 (695)
T ss_dssp CEEEEECSSCCEEEEEE---------TTE--EEEEE-------------CTTCTTCEEEEEBTTBCSGGGCEEEECCCSS
T ss_pred eEEeecCCCceEEEEec---------CCc--EEEEE-------------CCCCCCCEEEEEeCCCCCccCCeEEecCCCC
Confidence 23333343333333332 111 22221 1112223344444444432 12222123 4
Q ss_pred cceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeecc-cCceeeecceee
Q psy4579 301 GEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGH-QKEGLIEGTYNC 364 (368)
Q Consensus 301 ~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh-~~~V~~l~w~p~ 364 (368)
..+..++|+ ++ .++++...|+..+||.+... + .....+..+ .+.|.+++++|.
T Consensus 320 ~~l~~~~~~-~~-~lv~~~~~dg~~~l~~~~~~-------g--~~~~~l~~~~~~~v~~~~~s~d 373 (695)
T 2bkl_A 320 ASLLSVSIV-GG-HLSLEYLKDATSEVRVATLK-------G--KPVRTVQLPGVGAASNLMGLED 373 (695)
T ss_dssp CEEEEEEEE-TT-EEEEEEEETTEEEEEEEETT-------C--CEEEECCCSSSSEECCCBSCTT
T ss_pred CeEEEEEEE-CC-EEEEEEEECCEEEEEEEeCC-------C--CeeEEecCCCCeEEEEeecCCC
Confidence 467888888 44 78889999999999877531 1 111223333 555666766653
|
| >2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=98.95 E-value=4.2e-09 Score=92.96 Aligned_cols=227 Identities=8% Similarity=0.028 Sum_probs=121.2
Q ss_pred CceeeEecCCcccccCCCCc---cccccCcceeeeccccCCCCCcEEEEEEecCCCccccccCCcc--------------
Q psy4579 42 PSLTAQWLPDVTSVQLPNED---AQFDASNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYD-------------- 104 (368)
Q Consensus 42 ~~~~~~~~p~~~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-------------- 104 (368)
.+.+++|+|||++|++.+.+ +...++.+++..|....-..... +..+.|.+++..+......
T Consensus 60 ~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~ 138 (347)
T 2gop_A 60 NATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVP 138 (347)
T ss_dssp SCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESE-EEEEEECTTSSEEEEEEECCCC---------CC
T ss_pred cCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccc
Confidence 46679999999999987654 34345666554443221111112 6677776555444332211
Q ss_pred ---------cCCCCcccCCCCCeeee-eccccCCCCceeeEecCCCCCeeEEEeCCC-------cEEEEeCCCCCCCCcc
Q psy4579 105 ---------TDKGGNVQLPNEDAQFD-ASNYDTDKGGYGLSWNPSLNGYLLSASDDH-------TICLWDINATPKENRV 167 (368)
Q Consensus 105 ---------~~~~g~i~i~~~~~~~~-~~~~~h~~~v~~l~~sp~~~~~lasg~~dg-------~v~iwd~~~~~~~~~~ 167 (368)
......|.+|+..+... ..+.. . .+..+.|+|+| +++++..++ ...||.+.++
T Consensus 139 ~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg--~~~~~~~~~~~~~~~~~~~l~~~d~~------ 208 (347)
T 2gop_A 139 AWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK--IVVNVPHREIIPQYFKFWDIYIWEDG------ 208 (347)
T ss_dssp CC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE--EEEEEECCCSSCCSSCCEEEEEEETT------
T ss_pred eeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe--EEEEEecccccccccccccEEEeCCC------
Confidence 01134677788764333 33333 3 78899999997 666665542 4556655532
Q ss_pred cccceeeeccccceecceeeEEeCCCCCeEEEeeCC--------CcEEEEECCCCCCCCccccceeeeecccccEeE-EE
Q psy4579 168 IDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDD--------HTICLWDINATPKENRVIDAKTIFTGHTAVVED-YS 238 (368)
Q Consensus 168 ~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~d--------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~-v~ 238 (368)
....+..+ ..+. . ++|+ +..|+.++.+ ..|.+|| ++. ......++...+.. +.
T Consensus 209 --~~~~l~~~-~~~~---~--~spd-g~~l~~~~~~~~~~~~~~~~l~~~d--~~~-------~~~l~~~~~~~~~~~~~ 270 (347)
T 2gop_A 209 --KEEKMFEK-VSFY---A--VDSD-GERILLYGKPEKKYMSEHNKLYIYD--GKE-------VMGILDEVDRGVGQAKI 270 (347)
T ss_dssp --EEEEEEEE-ESEE---E--EEEC-SSCEEEEECCSSSCCCSSCEEEEEC--SSC-------EEESSTTCCSEEEEEEE
T ss_pred --ceEEeccC-ccee---e--ECCC-CCEEEEEEccccCCccccceEEEEC--CCc-------eEeccccCCcccCCccE
Confidence 12333334 3332 3 3898 7777776644 3677777 321 12223344555654 55
Q ss_pred EeeecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEE
Q psy4579 239 IHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIAT 318 (368)
Q Consensus 239 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~las 318 (368)
|+..++.++..++..++| . .+++. ..+. .+...|.+++|+| . ++++
T Consensus 271 ~sdg~~~~~~~~~~~~l~-~----------------------------~~g~~-~~~~-~~~~~v~~~~~s~-~--~~~~ 316 (347)
T 2gop_A 271 KDGKVYFTLFEEGSVNLY-I----------------------------WDGEI-KPIA-KGRHWIMGFDVDE-I--VVYL 316 (347)
T ss_dssp ETTEEEEEEEETTEEEEE-E----------------------------ESSSE-EEEE-CSSSEEEEEEESS-S--EEEE
T ss_pred EcCcEEEEEecCCcEEEE-E----------------------------cCCce-EEEe-cCCCeEEeeeeeC-c--EEEE
Confidence 531122222222222222 1 12222 2222 4577899999999 3 5556
Q ss_pred ecCCCeE-EEEECC
Q psy4579 319 KTPSSDV-LVFDYT 331 (368)
Q Consensus 319 gs~Dg~i-~iwd~~ 331 (368)
++.++.. .||.+.
T Consensus 317 ~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 317 KETATRLRELFTWD 330 (347)
T ss_dssp EECSSSCCEEEEES
T ss_pred EcCCCChHHheEeC
Confidence 6666665 788774
|
| >2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A* | Back alignment and structure |
|---|
Probab=98.91 E-value=4.3e-07 Score=77.87 Aligned_cols=236 Identities=8% Similarity=0.013 Sum_probs=131.7
Q ss_pred CceeeEecCCcccccCCCCccccccCcceeeeccccC-C-CCCcEEEEEEecCCCccccccCCcccCCCCcccCCCCCee
Q psy4579 42 PSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTS-D-EQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQ 119 (368)
Q Consensus 42 ~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~ 119 (368)
.+.++.+.|+++.++....++.+..++ .. +.... . ......+..+.+.+.+..+.+ . ..++.|..|+.+++
T Consensus 16 ~~~~i~~d~~g~l~v~~~~~~~v~~~d--~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~-~---~~~~~i~~~~~~g~ 88 (299)
T 2z2n_A 16 GPYGITVSDKGKVWITQHKANMISCIN--LD-GKITEYPLPTPDAKVMCLTISSDGEVWFT-E---NAANKIGRITKKGI 88 (299)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEEC--TT-CCEEEEECSSTTCCEEEEEECTTSCEEEE-E---TTTTEEEEECTTSC
T ss_pred CccceEECCCCCEEEEecCCCcEEEEc--CC-CCeEEecCCcccCceeeEEECCCCCEEEe-C---CCCCeEEEECCCCc
Confidence 467899999999877655556553333 22 21111 1 111123445555433332222 1 23567888887654
Q ss_pred eeec-cccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEE
Q psy4579 120 FDAS-NYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLL 198 (368)
Q Consensus 120 ~~~~-~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~ 198 (368)
.... .......+.++++.|++ .++++...++.|.+||. ++.. .......+...+. ++++.++ +.+.+
T Consensus 89 ~~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~d~-~g~~------~~~~~~~~~~~~~---~i~~~~~-g~l~v 156 (299)
T 2z2n_A 89 IKEYTLPNPDSAPYGITEGPNG-DIWFTEMNGNRIGRITD-DGKI------REYELPNKGSYPS---FITLGSD-NALWF 156 (299)
T ss_dssp EEEEECSSTTCCEEEEEECTTS-CEEEEETTTTEEEEECT-TCCE------EEEECSSTTCCEE---EEEECTT-SCEEE
T ss_pred EEEEeCCCcCCCceeeEECCCC-CEEEEecCCceEEEECC-CCCE------EEecCCCCCCCCc---eEEEcCC-CCEEE
Confidence 3221 12245578999999998 78887777889999998 4321 0111122233343 8999988 77777
Q ss_pred EeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeeecccccCCCCccceEEEEeecCCcccccccccccCCC
Q psy4579 199 SASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDK 278 (368)
Q Consensus 199 s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 278 (368)
+...++.|..||. ++.. . ..........+..+++.+ + ..+|+... ..
T Consensus 157 ~~~~~~~i~~~~~-~g~~-----~-~~~~~~~~~~~~~i~~~~--------~--g~l~v~~~----------------~~ 203 (299)
T 2z2n_A 157 TENQNNAIGRITE-SGDI-----T-EFKIPTPASGPVGITKGN--------D--DALWFVEI----------------IG 203 (299)
T ss_dssp EETTTTEEEEECT-TCCE-----E-EEECSSTTCCEEEEEECT--------T--SSEEEEET----------------TT
T ss_pred EeCCCCEEEEEcC-CCcE-----E-EeeCCCCCCcceeEEECC--------C--CCEEEEcc----------------CC
Confidence 7777889999998 4321 0 011122233455555542 1 22444321 11
Q ss_pred CCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECC
Q psy4579 279 GDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYT 331 (368)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~ 331 (368)
+.+..++. +++........+...+.++++++++ .++++...++.|..||..
T Consensus 204 ~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~d~~ 254 (299)
T 2z2n_A 204 NKIGRITT-SGEITEFKIPTPNARPHAITAGAGI-DLWFTEWGANKIGRLTSN 254 (299)
T ss_dssp TEEEEECT-TCCEEEEECSSTTCCEEEEEECSTT-CEEEEETTTTEEEEEETT
T ss_pred ceEEEECC-CCcEEEEECCCCCCCceeEEECCCC-CEEEeccCCceEEEECCC
Confidence 12233333 3332221111355678999999999 577676678999999973
|
| >2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A | Back alignment and structure |
|---|
Probab=98.88 E-value=1.4e-07 Score=82.63 Aligned_cols=182 Identities=11% Similarity=0.030 Sum_probs=110.8
Q ss_pred CCcccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceee
Q psy4579 108 GGNVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGL 187 (368)
Q Consensus 108 ~g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i 187 (368)
++.++.| .+.....+..+...+.+++|+|++ ++++++..++.|.+||..++. .......+...+. ++
T Consensus 26 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g-~l~~~~~~~~~i~~~d~~~~~-------~~~~~~~~~~~~~---~i 92 (333)
T 2dg1_A 26 ESELQTI--TAEPWLEISKKGLQLEGLNFDRQG-QLFLLDVFEGNIFKINPETKE-------IKRPFVSHKANPA---AI 92 (333)
T ss_dssp GGGSCEE--ECEEEEEEESSCCCEEEEEECTTS-CEEEEETTTCEEEEECTTTCC-------EEEEEECSSSSEE---EE
T ss_pred cccCccc--ccceeEEEeccCccccCcEECCCC-CEEEEECCCCEEEEEeCCCCc-------EEEEeeCCCCCcc---eE
Confidence 5666777 333444455666778999999998 788888889999999988763 1222223445564 99
Q ss_pred EEeCCCCCeEEEeeCC----CcEEEEECCCCCCCCccccceeeee--cccccEeEEEEeeecccccCCCCccceEEEEee
Q psy4579 188 SWNPSLNGYLLSASDD----HTICLWDINATPKENRVIDAKTIFT--GHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQ 261 (368)
Q Consensus 188 ~~~p~~~~~l~s~s~d----g~i~iwd~~~~~~~~~~~~~~~~~~--~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~ 261 (368)
+|+|+ +.++++...+ +.|.+||..++.. ...+. .+...++.+++++. ..+|+....
T Consensus 93 ~~~~d-g~l~v~~~~~~~~~~~i~~~d~~~~~~-------~~~~~~~~~~~~~~~i~~d~~----------g~l~v~~~~ 154 (333)
T 2dg1_A 93 KIHKD-GRLFVCYLGDFKSTGGIFAATENGDNL-------QDIIEDLSTAYCIDDMVFDSK----------GGFYFTDFR 154 (333)
T ss_dssp EECTT-SCEEEEECTTSSSCCEEEEECTTSCSC-------EEEECSSSSCCCEEEEEECTT----------SCEEEEECC
T ss_pred EECCC-CcEEEEeCCCCCCCceEEEEeCCCCEE-------EEEEccCccCCcccceEECCC----------CCEEEEecc
Confidence 99998 7877777666 6899999877531 11111 23345677777541 234443321
Q ss_pred cCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCC
Q psy4579 262 LPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 262 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
-... ...+.+..++...++... +. .+...+..++|+|++..++++.+.++.|.+||+..
T Consensus 155 ~~~~----------~~~~~l~~~~~~~~~~~~-~~-~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~ 213 (333)
T 2dg1_A 155 GYST----------NPLGGVYYVSPDFRTVTP-II-QNISVANGIALSTDEKVLWVTETTANRLHRIALED 213 (333)
T ss_dssp CBTT----------BCCEEEEEECTTSCCEEE-EE-EEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred cccc----------CCCceEEEEeCCCCEEEE-ee-cCCCcccceEECCCCCEEEEEeCCCCeEEEEEecC
Confidence 0000 001112222222222221 11 23345788999999965766777789999999853
|
| >3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=98.85 E-value=4.4e-08 Score=84.45 Aligned_cols=148 Identities=11% Similarity=0.089 Sum_probs=86.8
Q ss_pred eeeEecCCcc-cccCCCCccccccCcceeeeccccCCCCCcEEEEEEecCCCccccccCCcccCCCCcccCCCC-Ceeee
Q psy4579 44 LTAQWLPDVT-SVQLPNEDAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNE-DAQFD 121 (368)
Q Consensus 44 ~~~~~~p~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~-~~~~~ 121 (368)
-++.|+|+++ .++++..++.+ +.|+...+....... ...+..+.+.+.+..+ ++. ..++.|.+|+. +++..
T Consensus 31 eg~~~d~~g~~l~~~~~~~~~i--~~~~~~~~~~~~~~~-~~~~~~l~~~~dg~l~-v~~---~~~~~i~~~d~~~g~~~ 103 (296)
T 3e5z_A 31 EGPVYVPARSAVIFSDVRQNRT--WAWSDDGQLSPEMHP-SHHQNGHCLNKQGHLI-ACS---HGLRRLERQREPGGEWE 103 (296)
T ss_dssp EEEEEEGGGTEEEEEEGGGTEE--EEEETTSCEEEEESS-CSSEEEEEECTTCCEE-EEE---TTTTEEEEECSTTCCEE
T ss_pred cCCeEeCCCCEEEEEeCCCCEE--EEEECCCCeEEEECC-CCCcceeeECCCCcEE-EEe---cCCCeEEEEcCCCCcEE
Confidence 4699999998 66667777766 444443331111111 1124455564444332 222 23567888987 44332
Q ss_pred ecccc----CCCCceeeEecCCCCCeeEE----EeC-------------CCcEEEEeCCCCCCCCcccccceeeeccccc
Q psy4579 122 ASNYD----TDKGGYGLSWNPSLNGYLLS----ASD-------------DHTICLWDINATPKENRVIDAKTIFTGHTAV 180 (368)
Q Consensus 122 ~~~~~----h~~~v~~l~~sp~~~~~las----g~~-------------dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~ 180 (368)
..... ....+.+++++|+| +++++ |.. .+.|..++.. + ....+..+...
T Consensus 104 ~~~~~~~~~~~~~~~~i~~d~~G-~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g--------~~~~~~~~~~~ 173 (296)
T 3e5z_A 104 SIADSFEGKKLNSPNDVCLAPDG-SLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-G--------TLSAPIRDRVK 173 (296)
T ss_dssp EEECEETTEECCCCCCEEECTTS-CEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-S--------CEEEEECCCSS
T ss_pred EEeeccCCCCCCCCCCEEECCCC-CEEEECCccccccccccccccccCCCcEEEEECCC-C--------CEEEeecCCCC
Confidence 21111 22457789999999 88887 331 2344444443 2 12333444444
Q ss_pred eecceeeEEeCCCCCeEEEeeCCCcEEEEECC
Q psy4579 181 VEVRYGLSWNPSLNGYLLSASDDHTICLWDIN 212 (368)
Q Consensus 181 v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~ 212 (368)
.. .++|+|+ +..+++.+.++.|.+||+.
T Consensus 174 ~~---gi~~s~d-g~~lv~~~~~~~i~~~~~~ 201 (296)
T 3e5z_A 174 PN---GLAFLPS-GNLLVSDTGDNATHRYCLN 201 (296)
T ss_dssp EE---EEEECTT-SCEEEEETTTTEEEEEEEC
T ss_pred Cc---cEEECCC-CCEEEEeCCCCeEEEEEEC
Confidence 43 8999999 7777888889999999987
|
| >3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=98.82 E-value=1.6e-07 Score=84.09 Aligned_cols=201 Identities=9% Similarity=0.041 Sum_probs=104.8
Q ss_pred CCCceeeEecCCCCCeeEEEeC-C--CcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCC
Q psy4579 128 DKGGYGLSWNPSLNGYLLSASD-D--HTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDH 204 (368)
Q Consensus 128 ~~~v~~l~~sp~~~~~lasg~~-d--g~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg 204 (368)
...+.+++|+|+| +.|+.... + ..|.+||+.++. ...+..+..... ..+.|+|+ ++.|+.++.++
T Consensus 35 ~~~~~~~~~SpdG-~~l~~~~~~~g~~~l~~~d~~~~~--------~~~l~~~~~~~~--~~~~~spd-g~~l~~~~~~~ 102 (396)
T 3c5m_A 35 RNYFYQKCFTQDG-KKLLFAGDFDGNRNYYLLNLETQQ--------AVQLTEGKGDNT--FGGFISTD-ERAFFYVKNEL 102 (396)
T ss_dssp CCCTTSCCBCTTS-CEEEEEECTTSSCEEEEEETTTTE--------EEECCCSSCBCT--TTCEECTT-SSEEEEEETTT
T ss_pred ceeeecCcCCCCC-CEEEEEEecCCCceEEEEECCCCc--------EEEeecCCCCcc--ccceECCC-CCEEEEEEcCC
Confidence 3447889999999 77666543 3 368888887653 223333333321 24889999 89999999999
Q ss_pred cEEEEECCCCCCCCccccceeeeecccccEeEEEEeeecccccCCCCccceEEEEeecCCccccccccc--ccCCCCCcc
Q psy4579 205 TICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASN--YDTDKGDFG 282 (368)
Q Consensus 205 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~d~~~~~~~ 282 (368)
.|.+||+.++. .......+...... ...+.....+....++.....+.++...+.... .......+.
T Consensus 103 ~l~~~d~~~~~-------~~~~~~~~~~~~~~----g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~ 171 (396)
T 3c5m_A 103 NLMKVDLETLE-------EQVIYTVDEEWKGY----GTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLI 171 (396)
T ss_dssp EEEEEETTTCC-------EEEEEECCTTEEEE----EEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEE
T ss_pred cEEEEECCCCC-------cEEEEecccccCCC----CCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEE
Confidence 99999998763 12222222221110 001111111111111111111222222211111 011223455
Q ss_pred cccCCCCceeeeeecCcccceeEEEEeC-CCCcEEEEecCC------CeEEEEECCCCCCCCCCCCCCCCceeeecc--c
Q psy4579 283 GFGSVSGKIEIEIKINHEGEVNRARYMP-QNPCVIATKTPS------SDVLVFDYTKHPSKPDPNGECHPDLRLRGH--Q 353 (368)
Q Consensus 283 ~~~~~~~~~~~~~~~~h~~~i~~~~~~p-~~~~~lasgs~D------g~i~iwd~~~~~~~~~~~~~~~~~~~~~gh--~ 353 (368)
.++..+++..... .+...+..+.|+| ++ ..|+..+.+ ..|.+||+... . ...+..+ .
T Consensus 172 ~~d~~~g~~~~~~--~~~~~~~~~~~sp~dg-~~l~~~~~~~~~~~~~~l~~~d~~~~----------~-~~~l~~~~~~ 237 (396)
T 3c5m_A 172 KVDIETGELEVIH--QDTAWLGHPIYRPFDD-STVGFCHEGPHDLVDARMWLVNEDGS----------N-VRKIKEHAEG 237 (396)
T ss_dssp EEETTTCCEEEEE--EESSCEEEEEEETTEE-EEEEEEECSCSSSCSCCCEEEETTSC----------C-CEESSCCCTT
T ss_pred EEECCCCcEEeec--cCCcccccceECCCCC-CEEEEEecCCCCCCCceEEEEECCCC----------c-eeEeeccCCC
Confidence 6666666544332 4667889999999 67 434343333 46888887531 1 1122222 2
Q ss_pred Cceeeecceeee
Q psy4579 354 KEGLIEGTYNCY 365 (368)
Q Consensus 354 ~~V~~l~w~p~~ 365 (368)
..+..++|+|+.
T Consensus 238 ~~~~~~~~spdg 249 (396)
T 3c5m_A 238 ESCTHEFWIPDG 249 (396)
T ss_dssp EEEEEEEECTTS
T ss_pred ccccceEECCCC
Confidence 357778888864
|
| >3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=98.80 E-value=1.3e-07 Score=81.52 Aligned_cols=192 Identities=10% Similarity=-0.023 Sum_probs=113.2
Q ss_pred CCCcccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeec---c-cccee
Q psy4579 107 KGGNVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTG---H-TAVVE 182 (368)
Q Consensus 107 ~~g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~---h-~~~v~ 182 (368)
.++.|..|+.++. ...+..+...+.+++++|+| +++++...++.|.+||..++.. ...... . ...+
T Consensus 48 ~~~~i~~~~~~~~-~~~~~~~~~~~~~l~~~~dg-~l~v~~~~~~~i~~~d~~~g~~-------~~~~~~~~~~~~~~~- 117 (296)
T 3e5z_A 48 RQNRTWAWSDDGQ-LSPEMHPSHHQNGHCLNKQG-HLIACSHGLRRLERQREPGGEW-------ESIADSFEGKKLNSP- 117 (296)
T ss_dssp GGTEEEEEETTSC-EEEEESSCSSEEEEEECTTC-CEEEEETTTTEEEEECSTTCCE-------EEEECEETTEECCCC-
T ss_pred CCCEEEEEECCCC-eEEEECCCCCcceeeECCCC-cEEEEecCCCeEEEEcCCCCcE-------EEEeeccCCCCCCCC-
Confidence 3678888988776 44455577789999999998 7888777789999999876642 111111 1 1123
Q ss_pred cceeeEEeCCCCCeEEE----eeC-------------CCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeee--c
Q psy4579 183 VRYGLSWNPSLNGYLLS----ASD-------------DHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRL--I 243 (368)
Q Consensus 183 ~~~~i~~~p~~~~~l~s----~s~-------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~--~ 243 (368)
.++++.|+ +.++++ |+. .+.|..+|.. +. ...+..+....+.++|++. .
T Consensus 118 --~~i~~d~~-G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~--------~~~~~~~~~~~~gi~~s~dg~~ 185 (296)
T 3e5z_A 118 --NDVCLAPD-GSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT--------LSAPIRDRVKPNGLAFLPSGNL 185 (296)
T ss_dssp --CCEEECTT-SCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC--------EEEEECCCSSEEEEEECTTSCE
T ss_pred --CCEEECCC-CCEEEECCccccccccccccccccCCCcEEEEECCC-CC--------EEEeecCCCCCccEEECCCCCE
Confidence 38999998 888887 331 2345555544 21 2233344455677787641 1
Q ss_pred ccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCC-CCce---eeeeecCcccceeEEEEeCCCCcEEEEe
Q psy4579 244 LGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSV-SGKI---EIEIKINHEGEVNRARYMPQNPCVIATK 319 (368)
Q Consensus 244 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~~~~---~~~~~~~h~~~i~~~~~~p~~~~~lasg 319 (368)
+.+...+. .++.+ +.. .+.+ ...+ ..+...+..++++++| +++++.
T Consensus 186 lv~~~~~~--~i~~~--------------------------~~~~~g~~~~~~~~~-~~~~~~p~~i~~d~~G-~l~v~~ 235 (296)
T 3e5z_A 186 LVSDTGDN--ATHRY--------------------------CLNARGETEYQGVHF-TVEPGKTDGLRVDAGG-LIWASA 235 (296)
T ss_dssp EEEETTTT--EEEEE--------------------------EECSSSCEEEEEEEE-CCSSSCCCSEEEBTTS-CEEEEE
T ss_pred EEEeCCCC--eEEEE--------------------------EECCCCcCcCCCeEe-eCCCCCCCeEEECCCC-CEEEEc
Confidence 12222111 22221 111 1222 1111 2345567789999999 566554
Q ss_pred cCCCeEEEEECCCCCCCCCCCCCCCCceeeecccCceeeecce-ee
Q psy4579 320 TPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTY-NC 364 (368)
Q Consensus 320 s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~-p~ 364 (368)
++.|.+||... ..+..+..+.. +.+++|+ |.
T Consensus 236 --~~~v~~~~~~g-----------~~~~~~~~~~~-~~~~~f~~~d 267 (296)
T 3e5z_A 236 --GDGVHVLTPDG-----------DELGRVLTPQT-TSNLCFGGPE 267 (296)
T ss_dssp --TTEEEEECTTS-----------CEEEEEECSSC-CCEEEEESTT
T ss_pred --CCeEEEECCCC-----------CEEEEEECCCC-ceeEEEECCC
Confidence 88999999752 33334555555 7788884 54
|
| >1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ... | Back alignment and structure |
|---|
Probab=98.78 E-value=2.4e-07 Score=80.24 Aligned_cols=239 Identities=13% Similarity=0.154 Sum_probs=125.8
Q ss_pred eeeEecCCcccccC-------CCCccccccCcceeeeccccC-CC---C-CcEEEEEEecCCC-ccccccCCcccCCCCc
Q psy4579 44 LTAQWLPDVTSVQL-------PNEDAQFDASNYDTDKGTHTS-DE---Q-NHLLIASVQLPNE-DAQFDASNYDTDKGGN 110 (368)
Q Consensus 44 ~~~~~~p~~~~l~~-------~~~~~~~~~~~~~~~~~~~~~-~~---~-~~~~i~~~~~~~~-~~~~~~~~~~~~~~g~ 110 (368)
.++.|.|+++.+++ +..++.+. .|+...+.... .. . ....+..+.+.++ +..+.+.. .+.
T Consensus 21 ~~~~~~~~g~l~~~~~~~~~~~~~~~~i~--~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~-----~~~ 93 (314)
T 1pjx_A 21 EGPVFDKNGDFYIVAPEVEVNGKPAGEIL--RIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM-----RLG 93 (314)
T ss_dssp EEEEECTTSCEEEEETTCEETTEECCEEE--EECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET-----TTE
T ss_pred cCceECCCCCEEEEEeccccCCCCCCEEE--EEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC-----CCC
Confidence 46899999988777 56666663 33332222110 01 0 0112445555444 32222221 234
Q ss_pred ccCCCCCeeeeec-cc----cCCCCceeeEecCCCCCeeEEEeCC---------------CcEEEEeCCCCCCCCccccc
Q psy4579 111 VQLPNEDAQFDAS-NY----DTDKGGYGLSWNPSLNGYLLSASDD---------------HTICLWDINATPKENRVIDA 170 (368)
Q Consensus 111 i~i~~~~~~~~~~-~~----~h~~~v~~l~~sp~~~~~lasg~~d---------------g~v~iwd~~~~~~~~~~~~~ 170 (368)
|..|+.+++.... .. .....+.+++++|+| +++++...+ +.|..+|.. +.
T Consensus 94 l~~~d~~g~~~~~~~~~~~~~~~~~~~~i~~d~~g-~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~-------- 163 (314)
T 1pjx_A 94 LLVVQTDGTFEEIAKKDSEGRRMQGCNDCAFDYEG-NLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQ-------- 163 (314)
T ss_dssp EEEEETTSCEEECCSBCTTSCBCBCCCEEEECTTS-CEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SC--------
T ss_pred EEEEeCCCCEEEEEeccCCCccccCCcCEEECCCC-CEEEEecCcccccccccccccCCCCeEEEECCC-CC--------
Confidence 6667766433211 11 122458899999998 777776655 456666654 21
Q ss_pred ceeeeccccceecceeeEEe----CCCCCe-EEEeeCCCcEEEEECC-CCCCCCccccceeeeeccc-ccEeEEEEeeec
Q psy4579 171 KTIFTGHTAVVEVRYGLSWN----PSLNGY-LLSASDDHTICLWDIN-ATPKENRVIDAKTIFTGHT-AVVEDYSIHRLI 243 (368)
Q Consensus 171 ~~~~~~h~~~v~~~~~i~~~----p~~~~~-l~s~s~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~-~~v~~v~~~~~~ 243 (368)
...+..+..... .++|+ |+ ++. +++...++.|.+||+. .+... .......+.++. .....+++++
T Consensus 164 ~~~~~~~~~~~~---~i~~~~~~d~d-g~~l~v~~~~~~~i~~~~~~~~g~~~--~~~~~~~~~~~~~~~p~~i~~d~-- 235 (314)
T 1pjx_A 164 MIQVDTAFQFPN---GIAVRHMNDGR-PYQLIVAETPTKKLWSYDIKGPAKIE--NKKVWGHIPGTHEGGADGMDFDE-- 235 (314)
T ss_dssp EEEEEEEESSEE---EEEEEECTTSC-EEEEEEEETTTTEEEEEEEEETTEEE--EEEEEEECCCCSSCEEEEEEEBT--
T ss_pred EEEeccCCCCcc---eEEEecccCCC-CCEEEEEECCCCeEEEEECCCCCccc--cceEEEECCCCCCCCCCceEECC--
Confidence 122222222333 88999 98 644 5555678999999976 22100 000111222222 3344454432
Q ss_pred ccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCC
Q psy4579 244 LGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSS 323 (368)
Q Consensus 244 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg 323 (368)
...+|+... ..+.+..++..+++....+. .+...+.+++|+|++..++++...++
T Consensus 236 --------~G~l~v~~~----------------~~~~i~~~d~~~g~~~~~~~-~~~~~~~~i~~~~dg~~l~v~~~~~~ 290 (314)
T 1pjx_A 236 --------DNNLLVANW----------------GSSHIEVFGPDGGQPKMRIR-CPFEKPSNLHFKPQTKTIFVTEHENN 290 (314)
T ss_dssp --------TCCEEEEEE----------------TTTEEEEECTTCBSCSEEEE-CSSSCEEEEEECTTSSEEEEEETTTT
T ss_pred --------CCCEEEEEc----------------CCCEEEEEcCCCCcEeEEEe-CCCCCceeEEECCCCCEEEEEeCCCC
Confidence 123444431 01123333333344333333 45577899999999955777777889
Q ss_pred eEEEEECCC
Q psy4579 324 DVLVFDYTK 332 (368)
Q Consensus 324 ~i~iwd~~~ 332 (368)
.|..|++..
T Consensus 291 ~l~~~~~~~ 299 (314)
T 1pjx_A 291 AVWKFEWQR 299 (314)
T ss_dssp EEEEEECSS
T ss_pred eEEEEeCCC
Confidence 999999864
|
| >1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A | Back alignment and structure |
|---|
Probab=98.77 E-value=1.3e-06 Score=73.89 Aligned_cols=177 Identities=6% Similarity=0.022 Sum_probs=101.0
Q ss_pred CCCcccCCCCCeeeeec-cccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeee-ccccceecc
Q psy4579 107 KGGNVQLPNEDAQFDAS-NYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFT-GHTAVVEVR 184 (368)
Q Consensus 107 ~~g~i~i~~~~~~~~~~-~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~-~h~~~v~~~ 184 (368)
.++.|..|+..+..... ...+...+.++++++++ +++++.. ++.|.+||...... ..+. .....+
T Consensus 44 ~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g-~l~v~~~-~~~i~~~d~~~~~~--------~~~~~~~~~~p--- 110 (270)
T 1rwi_B 44 MYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAG-TVYVTDF-NNRVVTLAAGSNNQ--------TVLPFDGLNYP--- 110 (270)
T ss_dssp SSCEEEEECC-----EECCCCSCCSCCCEEECTTC-CEEEEET-TTEEEEECTTCSCC--------EECCCCSCSSE---
T ss_pred CCCcEEEecCCCcccceEeeCCcCCcceeEECCCC-CEEEEcC-CCEEEEEeCCCceE--------eeeecCCcCCC---
Confidence 35678778765533222 12344578899999998 7666666 88999999876421 2222 121334
Q ss_pred eeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeeecccccCCCCccceEEEEeecCC
Q psy4579 185 YGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPN 264 (368)
Q Consensus 185 ~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~ 264 (368)
.++++.|+ +.++++...++.|.+||..+... .............+++++ + ..+|+....
T Consensus 111 ~~i~~~~~-g~l~v~~~~~~~i~~~~~~~~~~-------~~~~~~~~~~p~~i~~~~--------~--g~l~v~~~~--- 169 (270)
T 1rwi_B 111 EGLAVDTQ-GAVYVADRGNNRVVKLAAGSKTQ-------TVLPFTGLNDPDGVAVDN--------S--GNVYVTDTD--- 169 (270)
T ss_dssp EEEEECTT-CCEEEEEGGGTEEEEECTTCCSC-------EECCCCSCCSCCCEEECT--------T--CCEEEEEGG---
T ss_pred cceEECCC-CCEEEEECCCCEEEEEECCCcee-------EeeccccCCCceeEEEeC--------C--CCEEEEECC---
Confidence 38999997 77888877889999997654311 111111122344555542 1 124443310
Q ss_pred cccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCC
Q psy4579 265 EDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 265 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
.+.+..++......... ...+...+.+++++++| +++++...++.|.+||...
T Consensus 170 -------------~~~i~~~~~~~~~~~~~-~~~~~~~p~~i~~d~~g-~l~v~~~~~~~v~~~~~~~ 222 (270)
T 1rwi_B 170 -------------NNRVVKLEAESNNQVVL-PFTDITAPWGIAVDEAG-TVYVTEHNTNQVVKLLAGS 222 (270)
T ss_dssp -------------GTEEEEECTTTCCEEEC-CCSSCCSEEEEEECTTC-CEEEEETTTSCEEEECTTC
T ss_pred -------------CCEEEEEecCCCceEee-cccCCCCceEEEECCCC-CEEEEECCCCcEEEEcCCC
Confidence 01122222222222211 11334668899999999 7887877889999999864
|
| >1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A* | Back alignment and structure |
|---|
Probab=98.76 E-value=2e-07 Score=87.70 Aligned_cols=181 Identities=12% Similarity=0.057 Sum_probs=109.0
Q ss_pred CCCcccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCC--CCCCCCcccccceeeeccccceecc
Q psy4579 107 KGGNVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDIN--ATPKENRVIDAKTIFTGHTAVVEVR 184 (368)
Q Consensus 107 ~~g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~--~~~~~~~~~~~~~~~~~h~~~v~~~ 184 (368)
.++.|.++|..+..+.........+..+.|+|+| +++.+++.|+.|.+||+. +.+ ....+.....+.
T Consensus 175 ~~~~V~viD~~t~~v~~~i~~g~~p~~v~~SpDG-r~lyv~~~dg~V~viD~~~~t~~-------~v~~i~~G~~P~--- 243 (567)
T 1qks_A 175 DAGQIALIDGSTYEIKTVLDTGYAVHISRLSASG-RYLFVIGRDGKVNMIDLWMKEPT-------TVAEIKIGSEAR--- 243 (567)
T ss_dssp TTTEEEEEETTTCCEEEEEECSSCEEEEEECTTS-CEEEEEETTSEEEEEETTSSSCC-------EEEEEECCSEEE---
T ss_pred CCCeEEEEECCCCeEEEEEeCCCCccceEECCCC-CEEEEEcCCCeEEEEECCCCCCc-------EeEEEecCCCCc---
Confidence 5788999998765444444455567799999999 888899999999999995 432 344555444443
Q ss_pred eeeEEe----CCCCCeEEEee-CCCcEEEEECCCCCCCCccccceeeeecc----------cc-cEeEEEEeeecccccC
Q psy4579 185 YGLSWN----PSLNGYLLSAS-DDHTICLWDINATPKENRVIDAKTIFTGH----------TA-VVEDYSIHRLILGTHT 248 (368)
Q Consensus 185 ~~i~~~----p~~~~~l~s~s-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~----------~~-~v~~v~~~~~~~~~~~ 248 (368)
.++|+ |+ +.++++++ .+++|.++|..+.+ ++..+... .. .+..+..++
T Consensus 244 -~ia~s~~~~pD-Gk~l~v~n~~~~~v~ViD~~t~~-------~~~~i~~~~~~~~~~~~~p~~rva~i~~s~------- 307 (567)
T 1qks_A 244 -SIETSKMEGWE-DKYAIAGAYWPPQYVIMDGETLE-------PKKIQSTRGMTYDEQEYHPEPRVAAILASH------- 307 (567)
T ss_dssp -EEEECCSTTCT-TTEEEEEEEETTEEEEEETTTCC-------EEEEEECCEECTTTCCEESCCCEEEEEECS-------
T ss_pred -eeEEccccCCC-CCEEEEEEccCCeEEEEECCCCc-------EEEEEeccccccccccccCCCceEEEEEcC-------
Confidence 89999 68 76666554 56999999987753 33333211 11 222332221
Q ss_pred CCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEE
Q psy4579 249 SDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVF 328 (368)
Q Consensus 249 ~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iw 328 (368)
++ ..++... ...|.+..++....................+.|+|++.+++++...++.|.++
T Consensus 308 -~~--~~~vv~~---------------~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~Vi 369 (567)
T 1qks_A 308 -YR--PEFIVNV---------------KETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVI 369 (567)
T ss_dssp -SS--SEEEEEE---------------TTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEE
T ss_pred -CC--CEEEEEe---------------cCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEE
Confidence 00 1111111 11222333332222111111112233456788999998788777788999999
Q ss_pred ECCC
Q psy4579 329 DYTK 332 (368)
Q Consensus 329 d~~~ 332 (368)
|...
T Consensus 370 D~~t 373 (567)
T 1qks_A 370 DTKE 373 (567)
T ss_dssp ETTT
T ss_pred ECCC
Confidence 9975
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=98.70 E-value=1.8e-07 Score=91.42 Aligned_cols=230 Identities=10% Similarity=0.018 Sum_probs=120.4
Q ss_pred EEEEEEecCCCccccccCCcccCCC--CcccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCCCc---------
Q psy4579 84 LLIASVQLPNEDAQFDASNYDTDKG--GNVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHT--------- 152 (368)
Q Consensus 84 ~~i~~~~~~~~~~~~~~~~~~~~~~--g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~--------- 152 (368)
..+....|++++..+...... .++ ..|++|++++........+...+..++|+|+ +.|+.++.|+.
T Consensus 163 ~~~~~~~~SPDG~~la~~~~~-~G~e~~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD--~~l~~~~~~~~~~~~~~~~~ 239 (741)
T 1yr2_A 163 TALDAWAASDDGRLLAYSVQD-GGSDWRTVKFVGVADGKPLADELKWVKFSGLAWLGN--DALLYSRFAEPKEGQAFQAL 239 (741)
T ss_dssp EEEEEEEECTTSSEEEEEEEE-TTCSEEEEEEEETTTCCEEEEEEEEEESCCCEESTT--SEEEEEECCCC--------C
T ss_pred EEEEeEEECCCCCEEEEEEcC-CCCceEEEEEEECCCCCCCCccCCCceeccEEEECC--CEEEEEEecCcccccccccC
Confidence 457777787665544433211 122 4699999876443332222233468999999 45555555543
Q ss_pred -----EEEEeCCCCCCCCcccccceeeec--cccceecceeeEEeCCCCCeEEEeeCCC-----cEEEEECCCCCCCCcc
Q psy4579 153 -----ICLWDINATPKENRVIDAKTIFTG--HTAVVEVRYGLSWNPSLNGYLLSASDDH-----TICLWDINATPKENRV 220 (368)
Q Consensus 153 -----v~iwd~~~~~~~~~~~~~~~~~~~--h~~~v~~~~~i~~~p~~~~~l~s~s~dg-----~i~iwd~~~~~~~~~~ 220 (368)
|++|++.++... ....+.. +...+ ..+.|+|+ +.+|+..+.++ .|.+||+.++...
T Consensus 240 ~~~~~v~~~~lgt~~~~-----~~lv~~~~~~~~~~---~~~~~SpD-G~~l~~~~~~~~~~~~~l~~~d~~~~~~~--- 307 (741)
T 1yr2_A 240 NYNQTVWLHRLGTPQSA-----DQPVFATPELPKRG---HGASVSSD-GRWVVITSSEGTDPVNTVHVARVTNGKIG--- 307 (741)
T ss_dssp CCCCEEEEEETTSCGGG-----CEEEECCTTCTTCE---EEEEECTT-SCEEEEEEECTTCSCCEEEEEEEETTEEC---
T ss_pred CCCCEEEEEECCCCchh-----CEEEeccCCCCeEE---EEEEECCC-CCEEEEEEEccCCCcceEEEEECCCCCCc---
Confidence 889998765321 1122332 22234 38999999 88777776544 8999998765110
Q ss_pred ccceeeeecccccEeEEEEeeecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCC-ceeeeeecCc
Q psy4579 221 IDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSG-KIEIEIKINH 299 (368)
Q Consensus 221 ~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-~~~~~~~~~h 299 (368)
+...+..+...+....+.. + ..+++.+- .+...+.+..++..++ .....+...+
T Consensus 308 --~~~~l~~~~~~~~~~~~~d---------g-~~l~~~s~-------------~~~~~~~l~~~d~~~~~~~~~~l~~~~ 362 (741)
T 1yr2_A 308 --PVTALIPDLKAQWDFVDGV---------G-DQLWFVSG-------------DGAPLKKIVRVDLSGSTPRFDTVVPES 362 (741)
T ss_dssp --CCEEEECSSSSCEEEEEEE---------T-TEEEEEEC-------------TTCTTCEEEEEECSSSSCEEEEEECCC
T ss_pred --ccEEecCCCCceEEEEecc---------C-CEEEEEEC-------------CCCCCCEEEEEeCCCCccccEEEecCC
Confidence 0223333333332222210 0 11111110 0111222333333332 1222233245
Q ss_pred ccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeec-ccCceeeecceee
Q psy4579 300 EGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRG-HQKEGLIEGTYNC 364 (368)
Q Consensus 300 ~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~g-h~~~V~~l~w~p~ 364 (368)
...+..++|. .+ .++++...|+..+||.+... + .....+.. +.+.|..++|+|.
T Consensus 363 ~~~l~~~~~~-~~-~lv~~~~~dg~~~l~~~~~~-------g--~~~~~l~~~~~~~v~~~~~s~d 417 (741)
T 1yr2_A 363 KDNLESVGIA-GN-RLFASYIHDAKSQVLAFDLD-------G--KPAGAVSLPGIGSASGLSGRPG 417 (741)
T ss_dssp SSEEEEEEEE-BT-EEEEEEEETTEEEEEEEETT-------S--CEEEECBCSSSCEEEEEECCBT
T ss_pred CCeEEEEEEE-CC-EEEEEEEECCEEEEEEEeCC-------C--CceeeccCCCCeEEEEeecCCC
Confidence 5556677777 33 78889999999888876521 1 11222332 3566777777764
|
| >2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii} | Back alignment and structure |
|---|
Probab=98.68 E-value=4.8e-06 Score=71.31 Aligned_cols=236 Identities=7% Similarity=0.021 Sum_probs=128.7
Q ss_pred CceeeEecCCcccccCCCCccccccCcceeeeccccC-C-CCCcEEEEEEecCCCccccccCCcccCCCCcccCCCCCee
Q psy4579 42 PSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTS-D-EQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQ 119 (368)
Q Consensus 42 ~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~ 119 (368)
.+.++.+.++++..++...++.+..++ .. +.... . ......+..+.+.+.+..+.+ . ..++.|..++.+++
T Consensus 21 ~p~~i~~d~~g~l~v~~~~~~~v~~~~--~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~-~---~~~~~v~~~d~~g~ 93 (300)
T 2qc5_A 21 GPYGITSSEDGKVWFTQHKANKISSLD--QS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFT-E---NGANKIGKLSKKGG 93 (300)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEEC--TT-SCEEEEECSSTTCCEEEEEECTTSCEEEE-E---TTTTEEEEECTTSC
T ss_pred CcceeeECCCCCEEEEcCCCCeEEEEC--CC-CceEEEECCCCCCcceeEEECCCCCEEEE-e---cCCCeEEEECCCCC
Confidence 456789999999877665566653332 22 21111 1 111122444444333322222 1 23567777877654
Q ss_pred eeec-cccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEE
Q psy4579 120 FDAS-NYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLL 198 (368)
Q Consensus 120 ~~~~-~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~ 198 (368)
.... .......+.++++.+++ .++++...++.|..+|.. +.. ....+......+ .++++.++ +.+.+
T Consensus 94 ~~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~~-g~~------~~~~~~~~~~~~---~~i~~d~~-g~l~v 161 (300)
T 2qc5_A 94 FTEYPLPQPDSGPYGITEGLNG-DIWFTQLNGDRIGKLTAD-GTI------YEYDLPNKGSYP---AFITLGSD-NALWF 161 (300)
T ss_dssp EEEEECSSTTCCEEEEEECSTT-CEEEEETTTTEEEEECTT-SCE------EEEECSSTTCCE---EEEEECTT-SSEEE
T ss_pred eEEecCCCCCCCCccceECCCC-CEEEEccCCCeEEEECCC-CCE------EEccCCCCCCCc---eeEEECCC-CCEEE
Confidence 3321 22234678999999998 788777778899999876 321 001122222334 38999998 77777
Q ss_pred EeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeeecccccCCCCccceEEEEeecCCcccccccccccCCC
Q psy4579 199 SASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDK 278 (368)
Q Consensus 199 s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 278 (368)
+...++.|..+|. ++.. . ......+...+..+++.+ ...+|+... ..
T Consensus 162 ~~~~~~~i~~~~~-~g~~-----~-~~~~~~~~~~~~~i~~d~----------~g~l~v~~~----------------~~ 208 (300)
T 2qc5_A 162 TENQNNSIGRITN-TGKL-----E-EYPLPTNAAAPVGITSGN----------DGALWFVEI----------------MG 208 (300)
T ss_dssp EETTTTEEEEECT-TCCE-----E-EEECSSTTCCEEEEEECT----------TSSEEEEET----------------TT
T ss_pred EecCCCeEEEECC-CCcE-----E-EeeCCCCCCCcceEEECC----------CCCEEEEcc----------------CC
Confidence 7666889999998 3311 0 011112223345555542 123444331 01
Q ss_pred CCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECC
Q psy4579 279 GDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYT 331 (368)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~ 331 (368)
+.+..++. ++.........+...+.++++.+++ .+.++...++.|..+|..
T Consensus 209 ~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g-~l~v~~~~~~~i~~~~~~ 259 (300)
T 2qc5_A 209 NKIGRITT-TGEISEYDIPTPNARPHAITAGKNS-EIWFTEWGANQIGRITND 259 (300)
T ss_dssp TEEEEECT-TCCEEEEECSSTTCCEEEEEECSTT-CEEEEETTTTEEEEECTT
T ss_pred CEEEEEcC-CCcEEEEECCCCCCCceEEEECCCC-CEEEeccCCCeEEEECCC
Confidence 11222222 2222222111345678899999999 577676677999999974
|
| >3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} | Back alignment and structure |
|---|
Probab=98.63 E-value=1.2e-06 Score=76.82 Aligned_cols=185 Identities=6% Similarity=-0.061 Sum_probs=105.7
Q ss_pred CCcccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccc-----ccee
Q psy4579 108 GGNVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHT-----AVVE 182 (368)
Q Consensus 108 ~g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~-----~~v~ 182 (368)
++.|.++|..................+++++++ .++++...++.|.+||..++. ....+.... ....
T Consensus 63 ~~~v~viD~~t~~~~~~i~~~~~p~~i~~~~~g-~lyv~~~~~~~v~~iD~~t~~-------~~~~i~~g~~~~~~~~p~ 134 (328)
T 3dsm_A 63 SHVIFAIDINTFKEVGRITGFTSPRYIHFLSDE-KAYVTQIWDYRIFIINPKTYE-------ITGYIECPDMDMESGSTE 134 (328)
T ss_dssp GTEEEEEETTTCCEEEEEECCSSEEEEEEEETT-EEEEEEBSCSEEEEEETTTTE-------EEEEEECTTCCTTTCBCC
T ss_pred CCEEEEEECcccEEEEEcCCCCCCcEEEEeCCC-eEEEEECCCCeEEEEECCCCe-------EEEEEEcCCccccCCCcc
Confidence 678999988753333333445678899999987 776666689999999998763 223333222 1222
Q ss_pred cceeeEEeCCCCCeEEEee-CCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeeecccccCCCCccceEEEEee
Q psy4579 183 VRYGLSWNPSLNGYLLSAS-DDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQ 261 (368)
Q Consensus 183 ~~~~i~~~p~~~~~l~s~s-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~ 261 (368)
.+++ .+ +.++++.. .++.|.++|+.++. ....+... .....+.+.+ + .++|+....
T Consensus 135 ---~i~~-~~-~~lyv~~~~~~~~v~viD~~t~~-------~~~~i~~g-~~p~~i~~~~--------d--G~l~v~~~~ 191 (328)
T 3dsm_A 135 ---QMVQ-YG-KYVYVNCWSYQNRILKIDTETDK-------VVDELTIG-IQPTSLVMDK--------Y--NKMWTITDG 191 (328)
T ss_dssp ---CEEE-ET-TEEEEEECTTCCEEEEEETTTTE-------EEEEEECS-SCBCCCEECT--------T--SEEEEEBCC
T ss_pred ---eEEE-EC-CEEEEEcCCCCCEEEEEECCCCe-------EEEEEEcC-CCccceEEcC--------C--CCEEEEECC
Confidence 6777 32 44444443 48999999998862 22222211 1112233321 1 234443321
Q ss_pred cCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCC
Q psy4579 262 LPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 262 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
.... ..+....+.+..+|..++++...+..........++|+|++..++++. . .|.+||...
T Consensus 192 ~~~~------~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~-~--~v~~~d~~t 253 (328)
T 3dsm_A 192 GYEG------SPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWIN-N--DIWRMPVEA 253 (328)
T ss_dssp BCTT------CSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEES-S--SEEEEETTC
T ss_pred CccC------CccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEc-c--EEEEEECCC
Confidence 1000 001111244566666666665554432234688999999986666543 3 899999875
|
| >1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C* | Back alignment and structure |
|---|
Probab=98.56 E-value=1.7e-06 Score=76.97 Aligned_cols=102 Identities=11% Similarity=0.081 Sum_probs=73.7
Q ss_pred cCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCc
Q psy4579 126 DTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHT 205 (368)
Q Consensus 126 ~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~ 205 (368)
.+.. |+.|+| ++ +.|+++ .++.|++||+.+... ......|+..+. ++.+.+. + +++++.||.
T Consensus 86 ~lp~-V~~l~f--d~-~~L~v~-~~~~l~v~dv~sl~~-------~~~~~~~~~~v~---~i~~~~p--~-~av~~~dG~ 147 (388)
T 1xip_A 86 EIPD-VIFVCF--HG-DQVLVS-TRNALYSLDLEELSE-------FRTVTSFEKPVF---QLKNVNN--T-LVILNSVND 147 (388)
T ss_dssp ECTT-EEEEEE--ET-TEEEEE-ESSEEEEEESSSTTC-------EEEEEECSSCEE---EEEECSS--E-EEEEETTSE
T ss_pred eCCC-eeEEEE--CC-CEEEEE-cCCcEEEEEchhhhc-------cCccceeeccee---eEEecCC--C-EEEEECCCC
Confidence 4566 999999 76 888888 889999999987642 234556666674 7777653 2 888999999
Q ss_pred EEEEECCCCCCCCccccceeeeecccccEeEEEEeeecccccCCCCccceE
Q psy4579 206 ICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLL 256 (368)
Q Consensus 206 i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~ 256 (368)
|.+||+.++.. . .+...|.+++|+|.-+..+..|+..+++
T Consensus 148 L~v~dl~~~~~-------~----~~~~~Vs~v~WSpkG~~vg~~dg~i~~~ 187 (388)
T 1xip_A 148 LSALDLRTKST-------K----QLAQNVTSFDVTNSQLAVLLKDRSFQSF 187 (388)
T ss_dssp EEEEETTTCCE-------E----EEEESEEEEEECSSEEEEEETTSCEEEE
T ss_pred EEEEEccCCcc-------c----cccCCceEEEEcCCceEEEEcCCcEEEE
Confidence 99999987631 1 1456899999997444445555555444
|
| >3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} | Back alignment and structure |
|---|
Probab=98.56 E-value=4.4e-07 Score=79.52 Aligned_cols=176 Identities=8% Similarity=-0.023 Sum_probs=101.3
Q ss_pred CCCcccCCCCCeeeeeccccCCC------CceeeEecCCCCCeeEEEe-CCCcEEEEeCCCCCCCCcccccceeeecccc
Q psy4579 107 KGGNVQLPNEDAQFDASNYDTDK------GGYGLSWNPSLNGYLLSAS-DDHTICLWDINATPKENRVIDAKTIFTGHTA 179 (368)
Q Consensus 107 ~~g~i~i~~~~~~~~~~~~~h~~------~v~~l~~sp~~~~~lasg~-~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~ 179 (368)
.++.|.++|..+..+.....-.. ....+++ .++ .++++.. .++.|.++|..+++ ....+.....
T Consensus 103 ~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~~~-~lyv~~~~~~~~v~viD~~t~~-------~~~~i~~g~~ 173 (328)
T 3dsm_A 103 WDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-YGK-YVYVNCWSYQNRILKIDTETDK-------VVDELTIGIQ 173 (328)
T ss_dssp SCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-ETT-EEEEEECTTCCEEEEEETTTTE-------EEEEEECSSC
T ss_pred CCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-ECC-EEEEEcCCCCCEEEEEECCCCe-------EEEEEEcCCC
Confidence 36889999876533332222122 5667777 333 5555544 48999999998764 2334433333
Q ss_pred ceecceeeEEeCCCCCeEEEeeCC----------CcEEEEECCCCCCCCccccceeeeecc-cccEeEEEEeeecccccC
Q psy4579 180 VVEVRYGLSWNPSLNGYLLSASDD----------HTICLWDINATPKENRVIDAKTIFTGH-TAVVEDYSIHRLILGTHT 248 (368)
Q Consensus 180 ~v~~~~~i~~~p~~~~~l~s~s~d----------g~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~v~~v~~~~~~~~~~~ 248 (368)
+. .+.++|+ +.+++++..+ +.|.++|..++. ....+... ......+++++.
T Consensus 174 p~----~i~~~~d-G~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~-------v~~~~~~~~g~~p~~la~~~d------ 235 (328)
T 3dsm_A 174 PT----SLVMDKY-NKMWTITDGGYEGSPYGYEAPSLYRIDAETFT-------VEKQFKFKLGDWPSEVQLNGT------ 235 (328)
T ss_dssp BC----CCEECTT-SEEEEEBCCBCTTCSSCBCCCEEEEEETTTTE-------EEEEEECCTTCCCEEEEECTT------
T ss_pred cc----ceEEcCC-CCEEEEECCCccCCccccCCceEEEEECCCCe-------EEEEEecCCCCCceeEEEecC------
Confidence 33 8899998 7777776654 789999998762 22233211 224566777640
Q ss_pred CCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceee-eeecCcccceeEEEEeCCCCcEEEEe----cCCC
Q psy4579 249 SDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEI-EIKINHEGEVNRARYMPQNPCVIATK----TPSS 323 (368)
Q Consensus 249 ~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-~~~~~h~~~i~~~~~~p~~~~~lasg----s~Dg 323 (368)
...+++... .+..+|..+ ++... .+...+......++++|++.+++++. ..++
T Consensus 236 ---~~~lyv~~~---------~v~~~d~~t----------~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~ 293 (328)
T 3dsm_A 236 ---RDTLYWINN---------DIWRMPVEA----------DRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQG 293 (328)
T ss_dssp ---SCEEEEESS---------SEEEEETTC----------SSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEE
T ss_pred ---CCEEEEEcc---------EEEEEECCC----------CceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCC
Confidence 112222210 112233332 22211 01101235678899999655888887 7789
Q ss_pred eEEEEECC
Q psy4579 324 DVLVFDYT 331 (368)
Q Consensus 324 ~i~iwd~~ 331 (368)
.|.+||..
T Consensus 294 ~V~v~d~~ 301 (328)
T 3dsm_A 294 IVYRYSPQ 301 (328)
T ss_dssp EEEEECTT
T ss_pred EEEEECCC
Confidence 99999986
|
| >2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A* | Back alignment and structure |
|---|
Probab=98.52 E-value=2.8e-05 Score=66.37 Aligned_cols=174 Identities=9% Similarity=0.019 Sum_probs=103.0
Q ss_pred CCcccCCCCCeeeeec-cccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeee--ccccceecc
Q psy4579 108 GGNVQLPNEDAQFDAS-NYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFT--GHTAVVEVR 184 (368)
Q Consensus 108 ~g~i~i~~~~~~~~~~-~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~--~h~~~v~~~ 184 (368)
++.|..|+.++..... ...+...+.+++++++| .++++...++.|..||.... ...+. .....+
T Consensus 35 ~~~v~~~d~~~~~~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~~g~---------~~~~~~~~~~~~~--- 101 (299)
T 2z2n_A 35 ANMISCINLDGKITEYPLPTPDAKVMCLTISSDG-EVWFTENAANKIGRITKKGI---------IKEYTLPNPDSAP--- 101 (299)
T ss_dssp TTEEEEECTTCCEEEEECSSTTCCEEEEEECTTS-CEEEEETTTTEEEEECTTSC---------EEEEECSSTTCCE---
T ss_pred CCcEEEEcCCCCeEEecCCcccCceeeEEECCCC-CEEEeCCCCCeEEEECCCCc---------EEEEeCCCcCCCc---
Confidence 5678888776433221 12345678999999998 78877777889999987621 12222 223334
Q ss_pred eeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeeecccccCCCCccceEEEEeecCC
Q psy4579 185 YGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPN 264 (368)
Q Consensus 185 ~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~ 264 (368)
.++++.|+ +.+.++...++.|..||. ++.. ...........+..+++.+ ...+|+...
T Consensus 102 ~~i~~~~~-g~l~v~~~~~~~i~~~d~-~g~~------~~~~~~~~~~~~~~i~~~~----------~g~l~v~~~---- 159 (299)
T 2z2n_A 102 YGITEGPN-GDIWFTEMNGNRIGRITD-DGKI------REYELPNKGSYPSFITLGS----------DNALWFTEN---- 159 (299)
T ss_dssp EEEEECTT-SCEEEEETTTTEEEEECT-TCCE------EEEECSSTTCCEEEEEECT----------TSCEEEEET----
T ss_pred eeeEECCC-CCEEEEecCCceEEEECC-CCCE------EEecCCCCCCCCceEEEcC----------CCCEEEEeC----
Confidence 38999987 788887777889999998 4321 0111112233455555542 123444321
Q ss_pred cccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEEC
Q psy4579 265 EDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDY 330 (368)
Q Consensus 265 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~ 330 (368)
..+.+..++. +++........+...+..+++++++ .++++...++.|.+||.
T Consensus 160 ------------~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~ 211 (299)
T 2z2n_A 160 ------------QNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDD-ALWFVEIIGNKIGRITT 211 (299)
T ss_dssp ------------TTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTS-SEEEEETTTTEEEEECT
T ss_pred ------------CCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCC-CEEEEccCCceEEEECC
Confidence 1112223333 2333221111344568899999998 57767667889999998
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=98.50 E-value=1.7e-06 Score=83.90 Aligned_cols=243 Identities=12% Similarity=0.094 Sum_probs=122.7
Q ss_pred CceeeEecCCcccccC-----CCCccccccCcceeeeccccCCCCCcEEEEEEecCCCccccccCCccc---------CC
Q psy4579 42 PSLTAQWLPDVTSVQL-----PNEDAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDT---------DK 107 (368)
Q Consensus 42 ~~~~~~~~p~~~~l~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~---------~~ 107 (368)
.+..+.|+|||++||+ |++...+ +.+++..|..............+.|. ++..+....++. ..
T Consensus 130 ~l~~~~~SpDg~~lAy~~~~~G~~~~~i--~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~ 206 (693)
T 3iuj_A 130 ALDQLSFSRDGRILAYSLSLAGSDWREI--HLMDVESKQPLETPLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTD 206 (693)
T ss_dssp EEEEEEECTTSSEEEEEEECSSCCEEEE--EEEETTTCSEEEEEEEEEESCCCEEE-TTTEEEEEESSCCC-------CC
T ss_pred EEEEEEECCCCCEEEEEEecCCCceEEE--EEEECCCCCCCccccCCceeccEEEe-CCCEEEEEEecCcccccccccCC
Confidence 4556799999999995 3333334 55566555432210000001233444 333333222221 11
Q ss_pred CCcccCCCCCee-----eeecccc-CCCCceeeEecCCCCCeeE-EEeC---CCcEEEEeCCCCCCCCcccccceeeecc
Q psy4579 108 GGNVQLPNEDAQ-----FDASNYD-TDKGGYGLSWNPSLNGYLL-SASD---DHTICLWDINATPKENRVIDAKTIFTGH 177 (368)
Q Consensus 108 ~g~i~i~~~~~~-----~~~~~~~-h~~~v~~l~~sp~~~~~la-sg~~---dg~v~iwd~~~~~~~~~~~~~~~~~~~h 177 (368)
...|.+|++.+. .+..... |...+..+.|+|+| ++|+ +.+. +..|.++|+.++.. ....+..+
T Consensus 207 ~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg-~~l~~~~~~~~~~~~i~~~d~~~~~~------~~~~l~~~ 279 (693)
T 3iuj_A 207 QHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDD-RFLLISAANSTSGNRLYVKDLSQENA------PLLTVQGD 279 (693)
T ss_dssp CCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTS-CEEEEEEESSSSCCEEEEEETTSTTC------CCEEEECS
T ss_pred CcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCC-CEEEEEEccCCCCcEEEEEECCCCCC------ceEEEeCC
Confidence 234666766432 2333333 45557889999999 6554 4332 35899999876532 23455555
Q ss_pred ccceecceeeEEeCCCCCeEEEeeCC---CcEEEEECCCCCCCCccccceeeeecccccEeEEEEee---ecccccCCCC
Q psy4579 178 TAVVEVRYGLSWNPSLNGYLLSASDD---HTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR---LILGTHTSDE 251 (368)
Q Consensus 178 ~~~v~~~~~i~~~p~~~~~l~s~s~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~---~~~~~~~~d~ 251 (368)
..... .. |+++++.+++....+ +.|..+|+.++... ....+..|...+. .|++ .++.....++
T Consensus 280 ~~~~~---~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~-----~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g 348 (693)
T 3iuj_A 280 LDADV---SL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPA-----HWRDLIPERQQVL--TVHSGSGYLFAEYMVDA 348 (693)
T ss_dssp SSSCE---EE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGG-----GCEEEECCCSSCE--EEEEETTEEEEEEEETT
T ss_pred CCceE---EE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCcc-----ccEEEecCCCCEE--EEEEECCEEEEEEEECC
Confidence 55442 33 566635555555544 57999999875321 1123444444443 4433 1111111111
Q ss_pred ccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecC---CCeEEEE
Q psy4579 252 QNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTP---SSDVLVF 328 (368)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~---Dg~i~iw 328 (368)
...+ ..++.. +.....+.....+.+..+.++|++..++.+.+. -++|..|
T Consensus 349 ~~~l--------------------------~~~d~~-g~~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~ 401 (693)
T 3iuj_A 349 TARV--------------------------EQFDYE-GKRVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRF 401 (693)
T ss_dssp EEEE--------------------------EEECTT-SCEEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEE
T ss_pred eeEE--------------------------EEEECC-CCeeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEE
Confidence 1111 122222 222222322445567777888888666655443 2788888
Q ss_pred ECCC
Q psy4579 329 DYTK 332 (368)
Q Consensus 329 d~~~ 332 (368)
|+..
T Consensus 402 d~~~ 405 (693)
T 3iuj_A 402 EPKS 405 (693)
T ss_dssp CTTT
T ss_pred ECCC
Confidence 8754
|
| >3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} | Back alignment and structure |
|---|
Probab=98.50 E-value=8.9e-06 Score=69.25 Aligned_cols=174 Identities=7% Similarity=0.000 Sum_probs=108.5
Q ss_pred CCCCcccCCCC-CeeeeeccccCC-CCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccc-ccee
Q psy4579 106 DKGGNVQLPNE-DAQFDASNYDTD-KGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHT-AVVE 182 (368)
Q Consensus 106 ~~~g~i~i~~~-~~~~~~~~~~h~-~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~-~~v~ 182 (368)
+.++.|.+||. +++.+-.+..+. ..+.++.++|+| ++++ +.++.|..||. +++ .+..+..+. ..+.
T Consensus 12 ~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG-~ilv--s~~~~V~~~d~-~G~-------~~W~~~~~~~~~~~ 80 (276)
T 3no2_A 12 SGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAG-EILF--SYSKGAKMITR-DGR-------ELWNIAAPAGCEMQ 80 (276)
T ss_dssp TTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTS-CEEE--ECBSEEEEECT-TSC-------EEEEEECCTTCEEE
T ss_pred CCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCC-CEEE--eCCCCEEEECC-CCC-------EEEEEcCCCCcccc
Confidence 35899999998 666665555555 478999999999 8888 34788999998 553 345565542 3453
Q ss_pred cceeeEEeCCCCCeEEEeeC-CCcEEEEECCCCCCCCccccceeeee------cccccEeEEEEeeecccccCCCCccce
Q psy4579 183 VRYGLSWNPSLNGYLLSASD-DHTICLWDINATPKENRVIDAKTIFT------GHTAVVEDYSIHRLILGTHTSDEQNHL 255 (368)
Q Consensus 183 ~~~~i~~~p~~~~~l~s~s~-dg~i~iwd~~~~~~~~~~~~~~~~~~------~~~~~v~~v~~~~~~~~~~~~d~~~~~ 255 (368)
++.+.|+ ++++++.+. ++.|..+|.. ++ .+..+. ++......+++. .++ .+
T Consensus 81 ---~~~~~~d-G~~lv~~~~~~~~v~~vd~~-Gk-------~l~~~~~~~~~~~~~~~~~~v~~~--------~~G--~~ 138 (276)
T 3no2_A 81 ---TARILPD-GNALVAWCGHPSTILEVNMK-GE-------VLSKTEFETGIERPHAQFRQINKN--------KKG--NY 138 (276)
T ss_dssp ---EEEECTT-SCEEEEEESTTEEEEEECTT-SC-------EEEEEEECCSCSSGGGSCSCCEEC--------TTS--CE
T ss_pred ---ccEECCC-CCEEEEecCCCCEEEEEeCC-CC-------EEEEEeccCCCCcccccccCceEC--------CCC--CE
Confidence 8889998 888888877 7788877753 31 122221 010111111111 011 11
Q ss_pred EEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCC
Q psy4579 256 LIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
++. +...+.+..++.. |+....+.. .....++...+++ +++++++.++.|..+|..+
T Consensus 139 lv~----------------~~~~~~v~~~d~~-G~~~w~~~~--~~~~~~~~~~~~g-~~~v~~~~~~~v~~~d~~t 195 (276)
T 3no2_A 139 LVP----------------LFATSEVREIAPN-GQLLNSVKL--SGTPFSSAFLDNG-DCLVACGDAHCFVQLNLES 195 (276)
T ss_dssp EEE----------------ETTTTEEEEECTT-SCEEEEEEC--SSCCCEEEECTTS-CEEEECBTTSEEEEECTTT
T ss_pred EEE----------------ecCCCEEEEECCC-CCEEEEEEC--CCCccceeEcCCC-CEEEEeCCCCeEEEEeCcC
Confidence 111 1123445666665 777766652 2456678888998 6777878888899888764
|
| >1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ... | Back alignment and structure |
|---|
Probab=98.50 E-value=1.1e-05 Score=69.73 Aligned_cols=197 Identities=9% Similarity=0.054 Sum_probs=105.8
Q ss_pred CCcccCCCCCeeeeeccc-----cCCCCceeeEecCC-CCCeeEEEeCCCcEEEEeCCCCCCCCcccccceee-e----c
Q psy4579 108 GGNVQLPNEDAQFDASNY-----DTDKGGYGLSWNPS-LNGYLLSASDDHTICLWDINATPKENRVIDAKTIF-T----G 176 (368)
Q Consensus 108 ~g~i~i~~~~~~~~~~~~-----~h~~~v~~l~~sp~-~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~-~----~ 176 (368)
++.|..|+.......... ++...+.+++++++ + +++++.. .+.|.+||.. +.. ..+ . +
T Consensus 45 ~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g-~l~v~~~-~~~l~~~d~~-g~~--------~~~~~~~~~~ 113 (314)
T 1pjx_A 45 AGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDAN-QLFVADM-RLGLLVVQTD-GTF--------EEIAKKDSEG 113 (314)
T ss_dssp CCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSS-EEEEEET-TTEEEEEETT-SCE--------EECCSBCTTS
T ss_pred CCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCC-cEEEEEC-CCCEEEEeCC-CCE--------EEEEeccCCC
Confidence 577888885432222221 24567899999999 6 6555554 4478889987 431 111 1 1
Q ss_pred -cccceecceeeEEeCCCCCeEEEeeCC---------------CcEEEEECCCCCCCCccccceeeeecccccEeEEEEe
Q psy4579 177 -HTAVVEVRYGLSWNPSLNGYLLSASDD---------------HTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIH 240 (368)
Q Consensus 177 -h~~~v~~~~~i~~~p~~~~~l~s~s~d---------------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~ 240 (368)
....+ .++++.|+ +.+.++...+ +.|..||.. +. ...+..+....+.++++
T Consensus 114 ~~~~~~---~~i~~d~~-g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~--------~~~~~~~~~~~~~i~~~ 180 (314)
T 1pjx_A 114 RRMQGC---NDCAFDYE-GNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQ--------MIQVDTAFQFPNGIAVR 180 (314)
T ss_dssp CBCBCC---CEEEECTT-SCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SC--------EEEEEEEESSEEEEEEE
T ss_pred ccccCC---cCEEECCC-CCEEEEecCcccccccccccccCCCCeEEEECCC-CC--------EEEeccCCCCcceEEEe
Confidence 11234 38999998 7777776655 567777654 21 11122222334556665
Q ss_pred ----eecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCC-CCc-----eeeeeecCcc-cceeEEEEe
Q psy4579 241 ----RLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSV-SGK-----IEIEIKINHE-GEVNRARYM 309 (368)
Q Consensus 241 ----~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~~~-----~~~~~~~~h~-~~i~~~~~~ 309 (368)
+. ...+|+... ..+.+..++.. .++ ....+. .+. ..+..++++
T Consensus 181 ~~~d~d---------g~~l~v~~~----------------~~~~i~~~~~~~~g~~~~~~~~~~~~-~~~~~~p~~i~~d 234 (314)
T 1pjx_A 181 HMNDGR---------PYQLIVAET----------------PTKKLWSYDIKGPAKIENKKVWGHIP-GTHEGGADGMDFD 234 (314)
T ss_dssp ECTTSC---------EEEEEEEET----------------TTTEEEEEEEEETTEEEEEEEEEECC-CCSSCEEEEEEEB
T ss_pred cccCCC---------CCEEEEEEC----------------CCCeEEEEECCCCCccccceEEEECC-CCCCCCCCceEEC
Confidence 31 011222110 00111111111 111 111111 333 567889999
Q ss_pred CCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeecccCceeeecceeee
Q psy4579 310 PQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 310 p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p~~ 365 (368)
++| +++++...++.|.+||... ......+..+...+.+++++|..
T Consensus 235 ~~G-~l~v~~~~~~~i~~~d~~~----------g~~~~~~~~~~~~~~~i~~~~dg 279 (314)
T 1pjx_A 235 EDN-NLLVANWGSSHIEVFGPDG----------GQPKMRIRCPFEKPSNLHFKPQT 279 (314)
T ss_dssp TTC-CEEEEEETTTEEEEECTTC----------BSCSEEEECSSSCEEEEEECTTS
T ss_pred CCC-CEEEEEcCCCEEEEEcCCC----------CcEeEEEeCCCCCceeEEECCCC
Confidence 999 6777767789999999863 12223444555677888887653
|
| >3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B | Back alignment and structure |
|---|
Probab=98.44 E-value=7.8e-06 Score=70.36 Aligned_cols=227 Identities=12% Similarity=0.121 Sum_probs=114.4
Q ss_pred eeEecCCc-ccccCCCCccccccCcceeeeccccC-CCCCcEEEEEEecCCCccccccCCcccCCCCcccCCCCCeeeee
Q psy4579 45 TAQWLPDV-TSVQLPNEDAQFDASNYDTDKGTHTS-DEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQFDA 122 (368)
Q Consensus 45 ~~~~~p~~-~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~ 122 (368)
...|+|+. ..+.+...++.+ +.|+...+.... ... ..+..+.+.+++..+.+ . +..|.+++.++....
T Consensus 17 gp~w~~~~~~l~~~d~~~~~i--~~~d~~~~~~~~~~~~--~~~~~i~~~~dG~l~v~-~-----~~~l~~~d~~~g~~~ 86 (297)
T 3g4e_A 17 SPVWEEVSNSLLFVDIPAKKV--CRWDSFTKQVQRVTMD--APVSSVALRQSGGYVAT-I-----GTKFCALNWKEQSAV 86 (297)
T ss_dssp EEEEETTTTEEEEEETTTTEE--EEEETTTCCEEEEECS--SCEEEEEEBTTSSEEEE-E-----TTEEEEEETTTTEEE
T ss_pred CCeEECCCCEEEEEECCCCEE--EEEECCCCcEEEEeCC--CceEEEEECCCCCEEEE-E-----CCeEEEEECCCCcEE
Confidence 57788854 445555555555 444433332211 111 12445555444332222 1 345667776532222
Q ss_pred cccc-----CCCCceeeEecCCCCCeeEEEeCC---------CcEEEEeCCCCCCCCcccccceeeeccccceecceeeE
Q psy4579 123 SNYD-----TDKGGYGLSWNPSLNGYLLSASDD---------HTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLS 188 (368)
Q Consensus 123 ~~~~-----h~~~v~~l~~sp~~~~~lasg~~d---------g~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~ 188 (368)
.+.. ....+++++++|+| +++++...+ ..-.+|.+..... ...+..+-... ..++
T Consensus 87 ~~~~~~~~~~~~~~~di~~d~dG-~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~-------~~~~~~~~~~p---ngi~ 155 (297)
T 3g4e_A 87 VLATVDNDKKNNRFNDGKVDPAG-RYFAGTMAEETAPAVLERHQGALYSLFPDHH-------VKKYFDQVDIS---NGLD 155 (297)
T ss_dssp EEEECCTTCSSEEEEEEEECTTS-CEEEEEEECCSBTTBCCTTCEEEEEECTTSC-------EEEEEEEESBE---EEEE
T ss_pred EEEecCCCCCCCCCCCEEECCCC-CEEEecCCcccccccccCCCcEEEEEECCCC-------EEEEeeccccc---cceE
Confidence 1111 12347889999998 766654322 3345666553221 12222222223 3899
Q ss_pred EeCCCCC-eEEEeeCCCcEEEEECC--CCCCCCccccceeeeecccccEeEEEEeeecccccCCCCccceEEEEeecCCc
Q psy4579 189 WNPSLNG-YLLSASDDHTICLWDIN--ATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNE 265 (368)
Q Consensus 189 ~~p~~~~-~l~s~s~dg~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 265 (368)
|+|+ ++ ++++.+.++.|.+||+. ++.... .+....+..+......+++.+ ...+|+...
T Consensus 156 ~spd-g~~lyv~~~~~~~i~~~~~d~~~G~~~~--~~~~~~~~~~~~~p~g~~~d~----------~G~lwva~~----- 217 (297)
T 3g4e_A 156 WSLD-HKIFYYIDSLSYSVDAFDYDLQTGQISN--RRSVYKLEKEEQIPDGMCIDA----------EGKLWVACY----- 217 (297)
T ss_dssp ECTT-SCEEEEEEGGGTEEEEEEECTTTCCEEE--EEEEEECCGGGCEEEEEEEBT----------TSCEEEEEE-----
T ss_pred EcCC-CCEEEEecCCCCcEEEEeccCCCCcccC--cEEEEECCCCCCCCCeeEECC----------CCCEEEEEc-----
Confidence 9998 65 45666778999999974 331000 001111222222333344321 124555432
Q ss_pred ccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEe-CCCCcEEEEecCC
Q psy4579 266 DAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYM-PQNPCVIATKTPS 322 (368)
Q Consensus 266 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~-p~~~~~lasgs~D 322 (368)
..+.+..++..+++....+. .+...+++++|. |++..|++|...+
T Consensus 218 -----------~~~~v~~~d~~tG~~~~~i~-~p~~~~t~~~f~g~d~~~L~vt~~~~ 263 (297)
T 3g4e_A 218 -----------NGGRVIRLDPVTGKRLQTVK-LPVDKTTSCCFGGKNYSEMYVTCARD 263 (297)
T ss_dssp -----------TTTEEEEECTTTCCEEEEEE-CSSSBEEEEEEESGGGCEEEEEEBCT
T ss_pred -----------CCCEEEEEcCCCceEEEEEE-CCCCCceEEEEeCCCCCEEEEEcCCc
Confidence 11224445555566666555 455679999998 8887777776543
|
| >3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} | Back alignment and structure |
|---|
Probab=98.40 E-value=8.7e-06 Score=69.30 Aligned_cols=174 Identities=8% Similarity=-0.009 Sum_probs=102.4
Q ss_pred hhhhhhhhcCcchheeecccccccCceeeEecCCcccccCCCCccccccCcceeeeccccCC--CCCcEEEEEEecCCCc
Q psy4579 18 EEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSD--EQNHLLIASVQLPNED 95 (368)
Q Consensus 18 ~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~ 95 (368)
...++|++.+..+...+..... ..+.++.++|+|+.+++ .++.+. .++. .|...-. ......+.++.+.+++
T Consensus 15 ~~v~~~d~~tG~~~w~~~~~~~-~~~~~~~~~pdG~ilvs--~~~~V~--~~d~-~G~~~W~~~~~~~~~~~~~~~~~dG 88 (276)
T 3no2_A 15 NKIAIINKDTKEIVWEYPLEKG-WECNSVAATKAGEILFS--YSKGAK--MITR-DGRELWNIAAPAGCEMQTARILPDG 88 (276)
T ss_dssp SEEEEEETTTTEEEEEEECCTT-CCCCEEEECTTSCEEEE--CBSEEE--EECT-TSCEEEEEECCTTCEEEEEEECTTS
T ss_pred CEEEEEECCCCeEEEEeCCCcc-CCCcCeEECCCCCEEEe--CCCCEE--EECC-CCCEEEEEcCCCCccccccEECCCC
Confidence 4455666656555444433221 24678999999998883 333332 2222 2222111 1111223334433333
Q ss_pred cccccCCcccCCCCcccCCCCCeeeeeccc------cCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccc
Q psy4579 96 AQFDASNYDTDKGGNVQLPNEDAQFDASNY------DTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVID 169 (368)
Q Consensus 96 ~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~------~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~ 169 (368)
..+.+.. ..++.+..++.+++.+.... .+......++..++| +++++...++.|..||.+ ++
T Consensus 89 ~~lv~~~---~~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G-~~lv~~~~~~~v~~~d~~-G~------- 156 (276)
T 3no2_A 89 NALVAWC---GHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKG-NYLVPLFATSEVREIAPN-GQ------- 156 (276)
T ss_dssp CEEEEEE---STTEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTS-CEEEEETTTTEEEEECTT-SC-------
T ss_pred CEEEEec---CCCCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCC-CEEEEecCCCEEEEECCC-CC-------
Confidence 2222211 11456666676665443321 222345667889998 899999999999999987 54
Q ss_pred cceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCC
Q psy4579 170 AKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINAT 214 (368)
Q Consensus 170 ~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~ 214 (368)
.+..+..+..+ +++...++ ++++++++.++.|..+|..++
T Consensus 157 ~~w~~~~~~~~----~~~~~~~~-g~~~v~~~~~~~v~~~d~~tG 196 (276)
T 3no2_A 157 LLNSVKLSGTP----FSSAFLDN-GDCLVACGDAHCFVQLNLESN 196 (276)
T ss_dssp EEEEEECSSCC----CEEEECTT-SCEEEECBTTSEEEEECTTTC
T ss_pred EEEEEECCCCc----cceeEcCC-CCEEEEeCCCCeEEEEeCcCC
Confidence 44556554333 37777887 889999988889999998876
|
| >3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B | Back alignment and structure |
|---|
Probab=98.40 E-value=2.9e-05 Score=66.77 Aligned_cols=202 Identities=8% Similarity=0.041 Sum_probs=108.4
Q ss_pred CCcccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeecc-----cccee
Q psy4579 108 GGNVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGH-----TAVVE 182 (368)
Q Consensus 108 ~g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h-----~~~v~ 182 (368)
++.|..|+.++.... .......+.+++++|+| +++++ . ++.|.+||..++.. ..+... ...+
T Consensus 34 ~~~i~~~d~~~~~~~-~~~~~~~~~~i~~~~dG-~l~v~-~-~~~l~~~d~~~g~~--------~~~~~~~~~~~~~~~- 100 (297)
T 3g4e_A 34 AKKVCRWDSFTKQVQ-RVTMDAPVSSVALRQSG-GYVAT-I-GTKFCALNWKEQSA--------VVLATVDNDKKNNRF- 100 (297)
T ss_dssp TTEEEEEETTTCCEE-EEECSSCEEEEEEBTTS-SEEEE-E-TTEEEEEETTTTEE--------EEEEECCTTCSSEEE-
T ss_pred CCEEEEEECCCCcEE-EEeCCCceEEEEECCCC-CEEEE-E-CCeEEEEECCCCcE--------EEEEecCCCCCCCCC-
Confidence 567777777654332 23355789999999998 65544 3 56789999876531 122111 1223
Q ss_pred cceeeEEeCCCCCeEEEeeCC---------CcEEEEECCCCCCCCccccceeeeecccccEeEEEEeee---cccccCCC
Q psy4579 183 VRYGLSWNPSLNGYLLSASDD---------HTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRL---ILGTHTSD 250 (368)
Q Consensus 183 ~~~~i~~~p~~~~~l~s~s~d---------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~---~~~~~~~d 250 (368)
.++++.|+ +.+.++...+ ..-.||.+..... ...+.......+.++|++. ++.+....
T Consensus 101 --~di~~d~d-G~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~-------~~~~~~~~~~pngi~~spdg~~lyv~~~~~ 170 (297)
T 3g4e_A 101 --NDGKVDPA-GRYFAGTMAEETAPAVLERHQGALYSLFPDHH-------VKKYFDQVDISNGLDWSLDHKIFYYIDSLS 170 (297)
T ss_dssp --EEEEECTT-SCEEEEEEECCSBTTBCCTTCEEEEEECTTSC-------EEEEEEEESBEEEEEECTTSCEEEEEEGGG
T ss_pred --CCEEECCC-CCEEEecCCcccccccccCCCcEEEEEECCCC-------EEEEeeccccccceEEcCCCCEEEEecCCC
Confidence 38999998 7766654322 2345555543211 1112222334456777541 11111110
Q ss_pred CccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEEC
Q psy4579 251 EQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDY 330 (368)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~ 330 (368)
..++... +|...|.+ ...+....+. .+.+....+++.++| ++.++....+.|..||.
T Consensus 171 --~~i~~~~--------------~d~~~G~~-----~~~~~~~~~~-~~~~~p~g~~~d~~G-~lwva~~~~~~v~~~d~ 227 (297)
T 3g4e_A 171 --YSVDAFD--------------YDLQTGQI-----SNRRSVYKLE-KEEQIPDGMCIDAEG-KLWVACYNGGRVIRLDP 227 (297)
T ss_dssp --TEEEEEE--------------ECTTTCCE-----EEEEEEEECC-GGGCEEEEEEEBTTS-CEEEEEETTTEEEEECT
T ss_pred --CcEEEEe--------------ccCCCCcc-----cCcEEEEECC-CCCCCCCeeEECCCC-CEEEEEcCCCEEEEEcC
Confidence 1111111 11111111 0001111111 234567889999999 67777777889999998
Q ss_pred CCCCCCCCCCCCCCCceeeecccCceeeecce-eee
Q psy4579 331 TKHPSKPDPNGECHPDLRLRGHQKEGLIEGTY-NCY 365 (368)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~-p~~ 365 (368)
.+ ...+..+..+...+++++|+ |+.
T Consensus 228 ~t----------G~~~~~i~~p~~~~t~~~f~g~d~ 253 (297)
T 3g4e_A 228 VT----------GKRLQTVKLPVDKTTSCCFGGKNY 253 (297)
T ss_dssp TT----------CCEEEEEECSSSBEEEEEEESGGG
T ss_pred CC----------ceEEEEEECCCCCceEEEEeCCCC
Confidence 64 23334555566788999998 653
|
| >3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=98.36 E-value=6.3e-05 Score=67.86 Aligned_cols=95 Identities=11% Similarity=0.093 Sum_probs=61.4
Q ss_pred CCCcccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCCC--cEEEEeCCCCCCCCcccccceee---ec-cccc
Q psy4579 107 KGGNVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDH--TICLWDINATPKENRVIDAKTIF---TG-HTAV 180 (368)
Q Consensus 107 ~~g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg--~v~iwd~~~~~~~~~~~~~~~~~---~~-h~~~ 180 (368)
.++.|+.|+.++..+........... ++|+|++ +.|+++..++ .|.+++...... ...+ .. ....
T Consensus 150 ~~~~I~~id~~~g~~~~~~~~~~~~~-ia~~~~g-~~l~~~d~~~~~~I~~~d~~~~~~-------~~~~g~~~~~~~~~ 220 (409)
T 3hrp_A 150 DDPRVRLISVDDNKVTTVHPGFKGGK-PAVTKDK-QRVYSIGWEGTHTVYVYMKASGWA-------PTRIGQLGSTFSGK 220 (409)
T ss_dssp TTTEEEEEETTTTEEEEEEETCCBCB-CEECTTS-SEEEEEBSSTTCEEEEEEGGGTTC-------EEEEEECCTTSCSC
T ss_pred CCCcEEEEECCCCEEEEeeccCCCCc-eeEecCC-CcEEEEecCCCceEEEEEcCCCce-------eEEeeeccchhcCC
Confidence 35778888877544433333333344 9999998 7888887766 788888765431 1122 11 2233
Q ss_pred eecceeeEEeCCCCCeEEEeeCCCcEEEEECCCC
Q psy4579 181 VEVRYGLSWNPSLNGYLLSASDDHTICLWDINAT 214 (368)
Q Consensus 181 v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~ 214 (368)
+. +++++|+ +..|+.+..++.|..||..++
T Consensus 221 p~---~iav~p~-~g~lyv~d~~~~I~~~d~~~~ 250 (409)
T 3hrp_A 221 IG---AVALDET-EEWLYFVDSNKNFGRFNVKTQ 250 (409)
T ss_dssp CC---BCEECTT-SSEEEEECTTCEEEEEETTTC
T ss_pred cE---EEEEeCC-CCeEEEEECCCcEEEEECCCC
Confidence 43 8999996 444555777899999998765
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=98.34 E-value=1.1e-05 Score=78.25 Aligned_cols=187 Identities=12% Similarity=0.050 Sum_probs=98.2
Q ss_pred CCCCceeeEecCCCCCeeEE-----EeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEee
Q psy4579 127 TDKGGYGLSWNPSLNGYLLS-----ASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSAS 201 (368)
Q Consensus 127 h~~~v~~l~~sp~~~~~las-----g~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s 201 (368)
|...+..++|||+| ++||- |+....|++||+.++.. .. ...+.... ..++|+ + ++.|+.++
T Consensus 127 ~~~~l~~~~~SpDg-~~lAy~~~~~G~~~~~i~v~dl~tg~~-------~~-~~~~~~k~---~~~~Ws-D-g~~l~y~~ 192 (693)
T 3iuj_A 127 GTTALDQLSFSRDG-RILAYSLSLAGSDWREIHLMDVESKQP-------LE-TPLKDVKF---SGISWL-G-NEGFFYSS 192 (693)
T ss_dssp SCCEEEEEEECTTS-SEEEEEEECSSCCEEEEEEEETTTCSE-------EE-EEEEEEES---CCCEEE-T-TTEEEEEE
T ss_pred CcEEEEEEEECCCC-CEEEEEEecCCCceEEEEEEECCCCCC-------Cc-cccCCcee---ccEEEe-C-CCEEEEEE
Confidence 55578889999999 77773 33346799999998742 11 11111112 288999 8 78787777
Q ss_pred CCC-------------cEEEEECCCCCCCCccccceeeeec-ccccEeEEEEeeecccccCCCCccceEEEEeecCCccc
Q psy4579 202 DDH-------------TICLWDINATPKENRVIDAKTIFTG-HTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDA 267 (368)
Q Consensus 202 ~dg-------------~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 267 (368)
.+. .|++|++.+...... .+..... |...+..+.|++ |+ .++.+... ...
T Consensus 193 ~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~---~v~~~~~~~~~~~~~~~~Sp--------Dg-~~l~~~~~-~~~--- 256 (693)
T 3iuj_A 193 YDKPDGSELSARTDQHKVYFHRLGTAQEDDR---LVFGAIPAQHHRYVGATVTE--------DD-RFLLISAA-NST--- 256 (693)
T ss_dssp SSCCC-------CCCCEEEEEETTSCGGGCE---EEESCSGGGCCSEEEEEECT--------TS-CEEEEEEE-SSS---
T ss_pred ecCcccccccccCCCcEEEEEECCCCcccce---EEEecCCCCCeEEEEEEEcC--------CC-CEEEEEEc-cCC---
Confidence 774 399999887643211 1122222 333455666654 11 11111111 000
Q ss_pred ccccccccCCCCCcccccCCCCce-eeeeecCcccceeEEEEeCCCCcEEEEecCC---CeEEEEECCCCCCCCCCCCCC
Q psy4579 268 QFDASNYDTDKGDFGGFGSVSGKI-EIEIKINHEGEVNRARYMPQNPCVIATKTPS---SDVLVFDYTKHPSKPDPNGEC 343 (368)
Q Consensus 268 ~~~~~~~d~~~~~~~~~~~~~~~~-~~~~~~~h~~~i~~~~~~p~~~~~lasgs~D---g~i~iwd~~~~~~~~~~~~~~ 343 (368)
....+.++++.++.. ...+. .+....... |++++..+++....| +.|..+|+.... .
T Consensus 257 ---------~~~~i~~~d~~~~~~~~~~l~-~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~--------~ 317 (693)
T 3iuj_A 257 ---------SGNRLYVKDLSQENAPLLTVQ-GDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPG--------P 317 (693)
T ss_dssp ---------SCCEEEEEETTSTTCCCEEEE-CSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCC--------G
T ss_pred ---------CCcEEEEEECCCCCCceEEEe-CCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCC--------c
Confidence 011222333323321 12222 455555444 667766776666554 679999987521 1
Q ss_pred CCceeeecccCceeeecceee
Q psy4579 344 HPDLRLRGHQKEGLIEGTYNC 364 (368)
Q Consensus 344 ~~~~~~~gh~~~V~~l~w~p~ 364 (368)
.....+..|...+. .|+|.
T Consensus 318 ~~~~~l~~~~~~~~--~~s~~ 336 (693)
T 3iuj_A 318 AHWRDLIPERQQVL--TVHSG 336 (693)
T ss_dssp GGCEEEECCCSSCE--EEEEE
T ss_pred cccEEEecCCCCEE--EEEEE
Confidence 11234556666554 66654
|
| >3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=98.34 E-value=1.9e-05 Score=71.22 Aligned_cols=152 Identities=7% Similarity=0.037 Sum_probs=82.1
Q ss_pred eeeEecCCcccccCCCCccccccCcceeeeccccC--CCCCcEEEEEEecCCCccccccCCcccCCCCcccCCCCCeeee
Q psy4579 44 LTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTS--DEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQFD 121 (368)
Q Consensus 44 ~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~ 121 (368)
..++|+|+++.+++...++.+ +.++...+.... ..... .. +.+.+....+....+. ....|..++..+...
T Consensus 134 ~~la~d~~g~lyv~d~~~~~I--~~id~~~g~~~~~~~~~~~--~~-ia~~~~g~~l~~~d~~--~~~~I~~~d~~~~~~ 206 (409)
T 3hrp_A 134 WGIAAVGNNTVLAYQRDDPRV--RLISVDDNKVTTVHPGFKG--GK-PAVTKDKQRVYSIGWE--GTHTVYVYMKASGWA 206 (409)
T ss_dssp EEEEECSTTEEEEEETTTTEE--EEEETTTTEEEEEEETCCB--CB-CEECTTSSEEEEEBSS--TTCEEEEEEGGGTTC
T ss_pred eEEEEeCCCCEEEEecCCCcE--EEEECCCCEEEEeeccCCC--Cc-eeEecCCCcEEEEecC--CCceEEEEEcCCCce
Confidence 358899999977776665655 333333222111 01000 01 2232222222222211 112566666543222
Q ss_pred e-cc---cc-CCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceee-----eccccceecce-eeEEe
Q psy4579 122 A-SN---YD-TDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIF-----TGHTAVVEVRY-GLSWN 190 (368)
Q Consensus 122 ~-~~---~~-h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~-----~~h~~~v~~~~-~i~~~ 190 (368)
. .+ .. ....+.+++++|++ ..|..+..++.|+.||..++.. ..+ .++.... ++ .++|+
T Consensus 207 ~~~~g~~~~~~~~~p~~iav~p~~-g~lyv~d~~~~I~~~d~~~~~~--------~~~~~~~~~g~~~~~--P~~~ia~~ 275 (409)
T 3hrp_A 207 PTRIGQLGSTFSGKIGAVALDETE-EWLYFVDSNKNFGRFNVKTQEV--------TLIKQLELSGSLGTN--PGPYLIYY 275 (409)
T ss_dssp EEEEEECCTTSCSCCCBCEECTTS-SEEEEECTTCEEEEEETTTCCE--------EEEEECCCCSCCCCS--SCCEEEEE
T ss_pred eEEeeeccchhcCCcEEEEEeCCC-CeEEEEECCCcEEEEECCCCCE--------EEEecccccCCCCCC--ccccEEEe
Confidence 1 11 12 45678899999954 3444466788999999886531 122 1111111 12 89999
Q ss_pred CCCCCeEEEeeCCCcEEEEECCC
Q psy4579 191 PSLNGYLLSASDDHTICLWDINA 213 (368)
Q Consensus 191 p~~~~~l~s~s~dg~i~iwd~~~ 213 (368)
|+++.++++-..++.|+.||...
T Consensus 276 p~~g~lyv~d~~~~~I~~~~~~g 298 (409)
T 3hrp_A 276 FVDSNFYMSDQNLSSVYKITPDG 298 (409)
T ss_dssp TTTTEEEEEETTTTEEEEECTTC
T ss_pred CCCCEEEEEeCCCCEEEEEecCC
Confidence 96467777777889999998764
|
| >2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ... | Back alignment and structure |
|---|
Probab=98.30 E-value=6.6e-06 Score=73.03 Aligned_cols=218 Identities=12% Similarity=0.060 Sum_probs=113.9
Q ss_pred ceeeEecCCcccccCCCC--ccccccCcceeeeccccCC---CCCcEEEEEEecCCCccccccCCcccCCCCcccCCCCC
Q psy4579 43 SLTAQWLPDVTSVQLPNE--DAQFDASNYDTDKGTHTSD---EQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNED 117 (368)
Q Consensus 43 ~~~~~~~p~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~ 117 (368)
...++++|||++|.+++. ++.+ ..+++..+..... ...... ....|.....+.+ .+.||.+.+++.+
T Consensus 110 p~~i~~spdg~~l~v~n~~~~~~v--~v~d~~~~~~~~~~i~~~~~~~--v~~~p~~~~~~~~----~~~dg~~~~v~~~ 181 (361)
T 2oiz_A 110 DGLFRQTTDGKFIVLQNASPATSI--GIVDVAKGDYVEDVTAAAGCWS--VIPQPNRPRSFMT----ICGDGGLLTINLG 181 (361)
T ss_dssp GGGEEECTTSSEEEEEEESSSEEE--EEEETTTTEEEEEEGGGTTEEE--EEECTTSSSEEEE----EETTSSEEEEEEC
T ss_pred cceEEECCCCCEEEEECCCCCCeE--EEEECCCCcEEEEEecCCCcce--eEEcCCCCeeEEE----ECCCCcEEEEEEC
Confidence 345899999999988754 4556 3344443322111 001000 1123332222211 1346777666542
Q ss_pred --eeee------eccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeec------ccc-cee
Q psy4579 118 --AQFD------ASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTG------HTA-VVE 182 (368)
Q Consensus 118 --~~~~------~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~------h~~-~v~ 182 (368)
++.. ..+.....++ .+.++|++ ..++..+.++.|.++|+...... ....+.- +.. ...
T Consensus 182 ~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g-~~~~~~~~~~~v~v~d~~~~~~~-----~~~~~~~~~~~~~~~~~~p~ 254 (361)
T 2oiz_A 182 EDGKVASQSRSKQMFSVKDDPI-FIAPALDK-DKAHFVSYYGNVYSADFSGDEVK-----VDGPWSLLNDEDKAKNWVPG 254 (361)
T ss_dssp TTSSEEEEEECCCCSCTTTSCB-CSCCEECS-SEEEEEBTTSEEEEEECSSSSCE-----EEEEEESCCHHHHHTTCEEC
T ss_pred CCCcEeeeccccceEcCCCCce-EEEecccC-CEEEEEeCCCeEEEEEecCCCce-----ecccccccCccccccccccC
Confidence 2222 0111122222 34456777 66777778999999998754211 1111110 000 000
Q ss_pred cceeeEEeCCCCCeEEEeeC-----------CCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeeecccccCCCC
Q psy4579 183 VRYGLSWNPSLNGYLLSASD-----------DHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDE 251 (368)
Q Consensus 183 ~~~~i~~~p~~~~~l~s~s~-----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~ 251 (368)
-...++|+|+ ++.++.+.. .+.|.+||+.+. +.+..+..+. ...++|+| |+
T Consensus 255 g~~~~a~~~d-g~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~-------~~v~~i~~~~--p~~ia~sp--------dg 316 (361)
T 2oiz_A 255 GYNLVGLHRA-SGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTK-------QRVARIPGRD--ALSMTIDQ--------QR 316 (361)
T ss_dssp CSSCEEEETT-TTEEEEEEESSCCTTCTTCCCSEEEEEETTTT-------EEEEEEECTT--CCEEEEET--------TT
T ss_pred CeeEEEEecC-CCeEEEEEccCCCcccccCCCceEEEEECCCC-------cEEEEEecCC--eeEEEECC--------CC
Confidence 0013789998 566555432 358999999887 4456666665 78888875 11
Q ss_pred ccceEEEEeecCCcccccccccccCCCCCcccccCCCC--ceeeeeecCcccceeEEEEeCCCC
Q psy4579 252 QNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSG--KIEIEIKINHEGEVNRARYMPQNP 313 (368)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~--~~~~~~~~~h~~~i~~~~~~p~~~ 313 (368)
.+++.. . . +.+.+||..++ ++...+. .+-.....++++|+|.
T Consensus 317 -~~l~v~--------------n---~-~~v~v~D~~t~~l~~~~~i~-~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 317 -NLMLTL--------------D---G-GNVNVYDISQPEPKLLRTIE-GAAEASLQVQFHPVGG 360 (361)
T ss_dssp -TEEEEE--------------C---S-SCEEEEECSSSSCEEEEEET-TSCSSEEEEEECCCSC
T ss_pred -CEEEEe--------------C---C-CeEEEEECCCCcceeeEEec-cCCCCcEEEEecCCCC
Confidence 122211 1 1 44566666677 6555543 4556678899999983
|
| >2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H* | Back alignment and structure |
|---|
Probab=98.28 E-value=7.7e-05 Score=66.36 Aligned_cols=259 Identities=8% Similarity=-0.009 Sum_probs=127.5
Q ss_pred eeEecCCcccccCCCC----------ccccccCcceeeeccccCC--CC---Cc---EEEEEEecCCCccccccCCcccC
Q psy4579 45 TAQWLPDVTSVQLPNE----------DAQFDASNYDTDKGTHTSD--EQ---NH---LLIASVQLPNEDAQFDASNYDTD 106 (368)
Q Consensus 45 ~~~~~p~~~~l~~~~~----------~~~~~~~~~~~~~~~~~~~--~~---~~---~~i~~~~~~~~~~~~~~~~~~~~ 106 (368)
-++++||+++|.++.. ++.+ ..++...++.... .. .. ..-..+.+.+++..+......
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v--~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~-- 145 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYV--EVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFA-- 145 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeE--EEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecC--
Confidence 7999999999887752 3444 3344432221111 00 00 011234454444444433321
Q ss_pred CCCcccCCCCCeeeeecc-ccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecce
Q psy4579 107 KGGNVQLPNEDAQFDASN-YDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRY 185 (368)
Q Consensus 107 ~~g~i~i~~~~~~~~~~~-~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 185 (368)
.++.|.++| ........ ..... |+.+.|.++..+++.+.||.+.++|. +++.... ......+ ....++. .
T Consensus 146 ~~~~v~viD-~t~~~~~~~i~~~~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~-~~~~~~~-~~~~p~~--~ 216 (373)
T 2mad_H 146 AGPAVGLVV-QGGSSDDQLLSSPT---CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGA-GLVGAML-TAAQNLL--T 216 (373)
T ss_pred CCCeEEEEE-CCCCEEeEEcCCCc---eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEE-Eeccccc-cCCccee--e
Confidence 246688888 65443333 33322 35566777677788889999999999 6532100 0000001 1112221 1
Q ss_pred eeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeee---cccccCCCCccceEEEEeec
Q psy4579 186 GLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRL---ILGTHTSDEQNHLLIASVQL 262 (368)
Q Consensus 186 ~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~---~~~~~~~d~~~~~~~~~~~~ 262 (368)
...+.++++.++++ +..+.+.+.|+...... ....+.-.........|.|. .++. +. ...++++.....
T Consensus 217 ~~~~~~~~~~~~~~-~~~~~v~vid~~~~~~~-----v~~~~~~~~~~~~~~~~~p~g~~~~~~-s~-d~~~lyV~~~~~ 288 (373)
T 2mad_H 217 QPAQANKSGRIVWP-VYSGKILQADISAAGAT-----NKAPIDALSGGRKADTWRPGGWQQVAY-LK-SSDGIYLLTSEQ 288 (373)
T ss_pred cceeEecCCEEEEE-cCCceEEEEeccCCcce-----EeeeeeecCCcccccceecCceEeEEE-CC-CCCEEEEEeccC
Confidence 45667763443443 47889999998754210 01111111111111222221 0110 11 112333322100
Q ss_pred CCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEec-CCCeEEEEECCCC
Q psy4579 263 PNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKT-PSSDVLVFDYTKH 333 (368)
Q Consensus 263 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs-~Dg~i~iwd~~~~ 333 (368)
... ......+.+..+|..+++....+..++ ....++|+|++..+++++. .++.|.++|....
T Consensus 289 ~~~-------~~~~~~~~V~VID~~t~~vv~~i~~g~--~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~ 351 (373)
T 2mad_H 289 SAW-------KLHAAAKEVTSVTGLVGQTSSQISLGH--DVDAISVAQDGGPDLYALSAGTEVLHIYDAGAG 351 (373)
T ss_pred Ccc-------cccCCCCeEEEEECCCCEEEEEEECCC--CcCeEEECCCCCeEEEEEcCCCCeEEEEECCCC
Confidence 000 000112346667777777777665433 5889999999963565666 5899999999763
|
| >2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii} | Back alignment and structure |
|---|
Probab=98.26 E-value=0.0003 Score=59.93 Aligned_cols=177 Identities=8% Similarity=0.008 Sum_probs=101.1
Q ss_pred CCcccCCCCCeeeee-ccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceeccee
Q psy4579 108 GGNVQLPNEDAQFDA-SNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYG 186 (368)
Q Consensus 108 ~g~i~i~~~~~~~~~-~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 186 (368)
++.|..++.+++... ....+...+.++++.+++ .++++...++.|..+|.. +.. ....+......+ .+
T Consensus 40 ~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~v~~~d~~-g~~------~~~~~~~~~~~~---~~ 108 (300)
T 2qc5_A 40 ANKISSLDQSGRIKEFEVPTPDAKVMCLIVSSLG-DIWFTENGANKIGKLSKK-GGF------TEYPLPQPDSGP---YG 108 (300)
T ss_dssp TTEEEEECTTSCEEEEECSSTTCCEEEEEECTTS-CEEEEETTTTEEEEECTT-SCE------EEEECSSTTCCE---EE
T ss_pred CCeEEEECCCCceEEEECCCCCCcceeEEECCCC-CEEEEecCCCeEEEECCC-CCe------EEecCCCCCCCC---cc
Confidence 566777776643322 122334678999999998 777777778889999977 321 011112122334 38
Q ss_pred eEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeeecccccCCCCccceEEEEeecCCcc
Q psy4579 187 LSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNED 266 (368)
Q Consensus 187 i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 266 (368)
+++.++ +.+.++...++.|..+|.. +.. . ...+......+..+++.+ + ..+|+...
T Consensus 109 i~~~~~-g~l~v~~~~~~~i~~~~~~-g~~-----~-~~~~~~~~~~~~~i~~d~--------~--g~l~v~~~------ 164 (300)
T 2qc5_A 109 ITEGLN-GDIWFTQLNGDRIGKLTAD-GTI-----Y-EYDLPNKGSYPAFITLGS--------D--NALWFTEN------ 164 (300)
T ss_dssp EEECST-TCEEEEETTTTEEEEECTT-SCE-----E-EEECSSTTCCEEEEEECT--------T--SSEEEEET------
T ss_pred ceECCC-CCEEEEccCCCeEEEECCC-CCE-----E-EccCCCCCCCceeEEECC--------C--CCEEEEec------
Confidence 999987 7887777778899999976 321 0 111121233455555542 1 12444321
Q ss_pred cccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECC
Q psy4579 267 AQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYT 331 (368)
Q Consensus 267 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~ 331 (368)
..+.+..++. +++........+...+..+++.+++ .+.++....+.|.+||..
T Consensus 165 ----------~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g-~l~v~~~~~~~i~~~~~~ 217 (300)
T 2qc5_A 165 ----------QNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDG-ALWFVEIMGNKIGRITTT 217 (300)
T ss_dssp ----------TTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTS-SEEEEETTTTEEEEECTT
T ss_pred ----------CCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCC-CEEEEccCCCEEEEEcCC
Confidence 0111222222 2222221111344568899999998 677676677889999973
|
| >2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1 | Back alignment and structure |
|---|
Probab=98.22 E-value=5.4e-05 Score=66.01 Aligned_cols=226 Identities=9% Similarity=0.113 Sum_probs=108.0
Q ss_pred eeEecCCcc-cccCCCCccccccCcceeeeccccC-CCCCcEEEEEEecCCCccccccCCcccCCCCcccCCCCCeeeee
Q psy4579 45 TAQWLPDVT-SVQLPNEDAQFDASNYDTDKGTHTS-DEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQFDA 122 (368)
Q Consensus 45 ~~~~~p~~~-~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~ 122 (368)
...|+|++. .+.+...++.+ +.++...+.... .... .+..+.+.+++..+.+. .+| |.+|+.++....
T Consensus 53 gp~~~~~~~~l~~~d~~~~~i--~~~d~~~~~~~~~~~~~--~v~~i~~~~dg~l~v~~-----~~g-l~~~d~~~g~~~ 122 (326)
T 2ghs_A 53 GPTFDPASGTAWWFNILEREL--HELHLASGRKTVHALPF--MGSALAKISDSKQLIAS-----DDG-LFLRDTATGVLT 122 (326)
T ss_dssp EEEEETTTTEEEEEEGGGTEE--EEEETTTTEEEEEECSS--CEEEEEEEETTEEEEEE-----TTE-EEEEETTTCCEE
T ss_pred CCeEeCCCCEEEEEECCCCEE--EEEECCCCcEEEEECCC--cceEEEEeCCCeEEEEE-----CCC-EEEEECCCCcEE
Confidence 468999754 44445555555 444433332111 1111 24444443333332222 133 666775432222
Q ss_pred cccc-----CCCCceeeEecCCCCCeeEEEeCC----CcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCC
Q psy4579 123 SNYD-----TDKGGYGLSWNPSLNGYLLSASDD----HTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSL 193 (368)
Q Consensus 123 ~~~~-----h~~~v~~l~~sp~~~~~lasg~~d----g~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~ 193 (368)
.+.. ....+++++++|+| +++++...+ +...||.+.++. ...+..+.... ..++|+|+
T Consensus 123 ~~~~~~~~~~~~~~~~i~~d~~G-~l~v~~~~~~~~~~~~~l~~~~~g~--------~~~~~~~~~~~---~~i~~s~d- 189 (326)
T 2ghs_A 123 LHAELESDLPGNRSNDGRMHPSG-ALWIGTMGRKAETGAGSIYHVAKGK--------VTKLFADISIP---NSICFSPD- 189 (326)
T ss_dssp EEECSSTTCTTEEEEEEEECTTS-CEEEEEEETTCCTTCEEEEEEETTE--------EEEEEEEESSE---EEEEECTT-
T ss_pred EEeeCCCCCCCCCCCCEEECCCC-CEEEEeCCCcCCCCceEEEEEeCCc--------EEEeeCCCccc---CCeEEcCC-
Confidence 1111 12358899999998 666654321 234444444321 12222222233 38999998
Q ss_pred CCeE-EEeeCCCcEEEEECC--CC-CCCCccccceeeeecccccEeEEEEeeecccccCCCCccceEEEEeecCCccccc
Q psy4579 194 NGYL-LSASDDHTICLWDIN--AT-PKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQF 269 (368)
Q Consensus 194 ~~~l-~s~s~dg~i~iwd~~--~~-~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 269 (368)
++.+ ++.+.++.|.+||+. ++ ....+ .....+.........+++.+ ...+|+...
T Consensus 190 g~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~--~~~~~~~~~~~~p~gi~~d~----------~G~lwva~~--------- 248 (326)
T 2ghs_A 190 GTTGYFVDTKVNRLMRVPLDARTGLPTGKA--EVFIDSTGIKGGMDGSVCDA----------EGHIWNARW--------- 248 (326)
T ss_dssp SCEEEEEETTTCEEEEEEBCTTTCCBSSCC--EEEEECTTSSSEEEEEEECT----------TSCEEEEEE---------
T ss_pred CCEEEEEECCCCEEEEEEcccccCCcccCc--eEEEECCCCCCCCCeeEECC----------CCCEEEEEe---------
Confidence 6654 555667899999986 33 11100 01111111122233333321 124555432
Q ss_pred ccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEe-CCCCcEEEEecCCC
Q psy4579 270 DASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYM-PQNPCVIATKTPSS 323 (368)
Q Consensus 270 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~-p~~~~~lasgs~Dg 323 (368)
..+.+..++. +++....+. .+...+.+++|. |++..++++...++
T Consensus 249 -------~~~~v~~~d~-~g~~~~~i~-~~~~~~~~~af~g~d~~~L~vt~~~~~ 294 (326)
T 2ghs_A 249 -------GEGAVDRYDT-DGNHIARYE-VPGKQTTCPAFIGPDASRLLVTSAREH 294 (326)
T ss_dssp -------TTTEEEEECT-TCCEEEEEE-CSCSBEEEEEEESTTSCEEEEEEBCTT
T ss_pred -------CCCEEEEECC-CCCEEEEEE-CCCCCcEEEEEecCCCCEEEEEecCCC
Confidence 0112333333 344444443 345679999998 88766766655553
|
| >3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ... | Back alignment and structure |
|---|
Probab=98.21 E-value=4.5e-05 Score=67.54 Aligned_cols=95 Identities=11% Similarity=-0.045 Sum_probs=62.7
Q ss_pred CCcccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEe----------CCCcEEEEeCCCCCCCCcccccceeeecc
Q psy4579 108 GGNVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSAS----------DDHTICLWDINATPKENRVIDAKTIFTGH 177 (368)
Q Consensus 108 ~g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~----------~dg~v~iwd~~~~~~~~~~~~~~~~~~~h 177 (368)
++.|.+.|.....+.....-...-. +.++|+| +.+.+++ .++.|.+||..+.+ ....+.-.
T Consensus 58 ~~~V~ViD~~t~~v~~~I~vG~~P~-va~spDG-~~lyVan~~~~r~~~G~~~~~VsviD~~t~~-------v~~~I~v~ 128 (386)
T 3sjl_D 58 VTQQFVIDGEAGRVIGMIDGGFLPN-PVVADDG-SFIAHASTVFSRIARGERTDYVEVFDPVTLL-------PTADIELP 128 (386)
T ss_dssp SEEEEEEETTTTEEEEEEEECSSCE-EEECTTS-SCEEEEEEEEEETTEEEEEEEEEEECTTTCC-------EEEEEEET
T ss_pred CCEEEEEECCCCeEEEEEECCCCCc-EEECCCC-CEEEEEcccccccccCCCCCEEEEEECCCCe-------EEEEEECC
Confidence 5688888876544333333222224 9999999 6665554 36789999998874 23333211
Q ss_pred c-------cceecceeeEEeCCCCCeEEEeeC--CCcEEEEECCCCC
Q psy4579 178 T-------AVVEVRYGLSWNPSLNGYLLSASD--DHTICLWDINATP 215 (368)
Q Consensus 178 ~-------~~v~~~~~i~~~p~~~~~l~s~s~--dg~i~iwd~~~~~ 215 (368)
. ... ..+.++|+ +.+++.+.. ++.|.++|+.+.+
T Consensus 129 ~g~r~~~g~~P---~~~a~spD-Gk~lyVan~~~~~~VsVID~~t~~ 171 (386)
T 3sjl_D 129 DAPRFLVGTYP---WMTSLTPD-GKTLLFYQFSPAPAVGVVDLEGKA 171 (386)
T ss_dssp TCCCCCBSCCG---GGEEECTT-SSEEEEEECSSSCEEEEEETTTTE
T ss_pred CccccccCCCC---ceEEEcCC-CCEEEEEEcCCCCeEEEEECCCCc
Confidence 1 112 38999999 787777653 6899999998874
|
| >1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A* | Back alignment and structure |
|---|
Probab=98.17 E-value=6.8e-05 Score=70.45 Aligned_cols=233 Identities=12% Similarity=0.044 Sum_probs=123.0
Q ss_pred CCcccccCCCCccccccCcceeeeccccCCCCCcEEEEEEecCCCccccccCCcccCCCCcccCCCCC---eeeeecccc
Q psy4579 50 PDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNED---AQFDASNYD 126 (368)
Q Consensus 50 p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~---~~~~~~~~~ 126 (368)
|....+++...++.+ ..++..++........-.....+.+.++...+... +.+|.|.+||.. .+.+....
T Consensus 165 ~~~~~~V~~~~~~~V--~viD~~t~~v~~~i~~g~~p~~v~~SpDGr~lyv~----~~dg~V~viD~~~~t~~~v~~i~- 237 (567)
T 1qks_A 165 LENLFSVTLRDAGQI--ALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVI----GRDGKVNMIDLWMKEPTTVAEIK- 237 (567)
T ss_dssp GGGEEEEEETTTTEE--EEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEE----ETTSEEEEEETTSSSCCEEEEEE-
T ss_pred CCceEEEEeCCCCeE--EEEECCCCeEEEEEeCCCCccceEECCCCCEEEEE----cCCCeEEEEECCCCCCcEeEEEe-
Confidence 334455556667766 44444433222211000012245565544433332 247889999983 33333332
Q ss_pred CCCCceeeEec----CCCCCeeEEEe-CCCcEEEEeCCCCCCCCcccccceeeec----------ccc-ceecceeeEEe
Q psy4579 127 TDKGGYGLSWN----PSLNGYLLSAS-DDHTICLWDINATPKENRVIDAKTIFTG----------HTA-VVEVRYGLSWN 190 (368)
Q Consensus 127 h~~~v~~l~~s----p~~~~~lasg~-~dg~v~iwd~~~~~~~~~~~~~~~~~~~----------h~~-~v~~~~~i~~~ 190 (368)
.......++|+ |+| +++++++ .+++|.++|..+.+ ++..+.. |.. .+. .+..+
T Consensus 238 ~G~~P~~ia~s~~~~pDG-k~l~v~n~~~~~v~ViD~~t~~-------~~~~i~~~~~~~~~~~~~p~~rva---~i~~s 306 (567)
T 1qks_A 238 IGSEARSIETSKMEGWED-KYAIAGAYWPPQYVIMDGETLE-------PKKIQSTRGMTYDEQEYHPEPRVA---AILAS 306 (567)
T ss_dssp CCSEEEEEEECCSTTCTT-TEEEEEEEETTEEEEEETTTCC-------EEEEEECCEECTTTCCEESCCCEE---EEEEC
T ss_pred cCCCCceeEEccccCCCC-CEEEEEEccCCeEEEEECCCCc-------EEEEEeccccccccccccCCCceE---EEEEc
Confidence 23346789999 698 6666655 56999999987754 3333321 112 343 77788
Q ss_pred CCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeeecccccCCCCccceEEEEeecCCcccccc
Q psy4579 191 PSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFD 270 (368)
Q Consensus 191 p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 270 (368)
++...++++...+|.|.++|....... ....+. .......+.|++ ...++++..
T Consensus 307 ~~~~~~vv~~~~~g~v~~vd~~~~~~~-----~v~~i~-~~~~~~d~~~~p---------dgr~~~va~----------- 360 (567)
T 1qks_A 307 HYRPEFIVNVKETGKILLVDYTDLNNL-----KTTEIS-AERFLHDGGLDG---------SHRYFITAA----------- 360 (567)
T ss_dssp SSSSEEEEEETTTTEEEEEETTCSSEE-----EEEEEE-CCSSEEEEEECT---------TSCEEEEEE-----------
T ss_pred CCCCEEEEEecCCCeEEEEecCCCccc-----eeeeee-ccccccCceECC---------CCCEEEEEe-----------
Confidence 875556777778899999998764210 011111 122233444543 011222221
Q ss_pred cccccCCCCCcccccCCCCceeeeeec----CcccceeEEEEeCCCCcEEEEec-CCCeEEEEECCC
Q psy4579 271 ASNYDTDKGDFGGFGSVSGKIEIEIKI----NHEGEVNRARYMPQNPCVIATKT-PSSDVLVFDYTK 332 (368)
Q Consensus 271 ~~~~d~~~~~~~~~~~~~~~~~~~~~~----~h~~~i~~~~~~p~~~~~lasgs-~Dg~i~iwd~~~ 332 (368)
. ..+.+..+|..++++...+.. .|.+....+ ++|++..+.+++. .+++|.++|...
T Consensus 361 ---~--~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~ 421 (567)
T 1qks_A 361 ---N--ARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDP 421 (567)
T ss_dssp ---G--GGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCT
T ss_pred ---C--CCCeEEEEECCCCcEEEEEeccCcCCCCccceee-ECCCCCcEEEeCCCCCCeEEEecCCC
Confidence 1 112234445555555444433 354422222 6888546766654 568999999875
|
| >2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1 | Back alignment and structure |
|---|
Probab=98.10 E-value=0.00022 Score=62.06 Aligned_cols=197 Identities=12% Similarity=0.038 Sum_probs=101.9
Q ss_pred CCcccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeec----c-cccee
Q psy4579 108 GGNVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTG----H-TAVVE 182 (368)
Q Consensus 108 ~g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~----h-~~~v~ 182 (368)
++.|..|+.++..... ......+.++.|+|+| +++++. .++ |.+||..++.. ..+.. . ...+
T Consensus 70 ~~~i~~~d~~~~~~~~-~~~~~~v~~i~~~~dg-~l~v~~-~~g-l~~~d~~~g~~--------~~~~~~~~~~~~~~~- 136 (326)
T 2ghs_A 70 ERELHELHLASGRKTV-HALPFMGSALAKISDS-KQLIAS-DDG-LFLRDTATGVL--------TLHAELESDLPGNRS- 136 (326)
T ss_dssp GTEEEEEETTTTEEEE-EECSSCEEEEEEEETT-EEEEEE-TTE-EEEEETTTCCE--------EEEECSSTTCTTEEE-
T ss_pred CCEEEEEECCCCcEEE-EECCCcceEEEEeCCC-eEEEEE-CCC-EEEEECCCCcE--------EEEeeCCCCCCCCCC-
Confidence 4667777765433222 2245679999999998 666654 444 88999876531 11211 1 1234
Q ss_pred cceeeEEeCCCCCeEEEeeC------CCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeee---cccccCCCCcc
Q psy4579 183 VRYGLSWNPSLNGYLLSASD------DHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRL---ILGTHTSDEQN 253 (368)
Q Consensus 183 ~~~~i~~~p~~~~~l~s~s~------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~---~~~~~~~d~~~ 253 (368)
.+++++|+ +.+.++... .+.|..+| ++. ...+.......+.++|++. +..+...+ .
T Consensus 137 --~~i~~d~~-G~l~v~~~~~~~~~~~~~l~~~~--~g~--------~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~--~ 201 (326)
T 2ghs_A 137 --NDGRMHPS-GALWIGTMGRKAETGAGSIYHVA--KGK--------VTKLFADISIPNSICFSPDGTTGYFVDTKV--N 201 (326)
T ss_dssp --EEEEECTT-SCEEEEEEETTCCTTCEEEEEEE--TTE--------EEEEEEEESSEEEEEECTTSCEEEEEETTT--C
T ss_pred --CCEEECCC-CCEEEEeCCCcCCCCceEEEEEe--CCc--------EEEeeCCCcccCCeEEcCCCCEEEEEECCC--C
Confidence 38999998 776665432 24455555 221 1122222233456666531 11111110 1
Q ss_pred ceEEEEeecCCcccccccccccCCCC-CcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCC
Q psy4579 254 HLLIASVQLPNEDAQFDASNYDTDKG-DFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
.++.... +...| .+. ..+....+. ........+++.++| ++.++...++.|.+||..
T Consensus 202 ~I~~~d~--------------~~~~Gl~~~-----~~~~~~~~~-~~~~~p~gi~~d~~G-~lwva~~~~~~v~~~d~~- 259 (326)
T 2ghs_A 202 RLMRVPL--------------DARTGLPTG-----KAEVFIDST-GIKGGMDGSVCDAEG-HIWNARWGEGAVDRYDTD- 259 (326)
T ss_dssp EEEEEEB--------------CTTTCCBSS-----CCEEEEECT-TSSSEEEEEEECTTS-CEEEEEETTTEEEEECTT-
T ss_pred EEEEEEc--------------ccccCCccc-----CceEEEECC-CCCCCCCeeEECCCC-CEEEEEeCCCEEEEECCC-
Confidence 1221111 00011 100 001111111 233456789999999 566565567889999874
Q ss_pred CCCCCCCCCCCCCceeeecccCceeeecce-ee
Q psy4579 333 HPSKPDPNGECHPDLRLRGHQKEGLIEGTY-NC 364 (368)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~-p~ 364 (368)
...+..+..+...+++++|+ |+
T Consensus 260 ----------g~~~~~i~~~~~~~~~~af~g~d 282 (326)
T 2ghs_A 260 ----------GNHIARYEVPGKQTTCPAFIGPD 282 (326)
T ss_dssp ----------CCEEEEEECSCSBEEEEEEESTT
T ss_pred ----------CCEEEEEECCCCCcEEEEEecCC
Confidence 22233445556678899987 64
|
| >2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H* | Back alignment and structure |
|---|
Probab=97.92 E-value=0.00086 Score=59.54 Aligned_cols=92 Identities=10% Similarity=-0.127 Sum_probs=57.9
Q ss_pred cccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEe----------CCCcEEEEeCCCCCCCCcccccceeeecc--
Q psy4579 110 NVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSAS----------DDHTICLWDINATPKENRVIDAKTIFTGH-- 177 (368)
Q Consensus 110 ~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~----------~dg~v~iwd~~~~~~~~~~~~~~~~~~~h-- 177 (368)
.|.++|.....+.....-...- .+.++|+| +.+..+. .++.|.++|..+.+. ...+.-.
T Consensus 48 ~v~v~D~~t~~~~~~i~~g~~p-~i~~spDg-~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~-------~~~i~~~~~ 118 (373)
T 2mad_H 48 QQWVLDAGSGSILGHVNGGFLP-NPVAAHSG-SEFALASTSFSRIAKGKRTDYVEVFDPVTFLP-------IADIELPDA 118 (373)
T ss_pred EEEEEECCCCeEEEEecCCCCC-CeEECCCC-CEEEEEeccccccccCCCCCeEEEEECCCCcE-------EEEEECCCc
Confidence 5667776543222222222222 89999999 7777765 367899999987542 2222111
Q ss_pred -----ccceecceeeEEeCCCCCeEEEeeC--CCcEEEEECCCCC
Q psy4579 178 -----TAVVEVRYGLSWNPSLNGYLLSASD--DHTICLWDINATP 215 (368)
Q Consensus 178 -----~~~v~~~~~i~~~p~~~~~l~s~s~--dg~i~iwd~~~~~ 215 (368)
.... ..+.|+|+ +++|+.++. ++.|.++| .++.
T Consensus 119 ~~~~~g~~p---~~~~~spD-G~~l~v~n~~~~~~v~viD-~t~~ 158 (373)
T 2mad_H 119 PRFDVGPYS---WMNANTPN-NADLLFFQFAAGPAVGLVV-QGGS 158 (373)
T ss_pred cccccCCCc---cceEECCC-CCEEEEEecCCCCeEEEEE-CCCC
Confidence 1112 28899999 888887764 57899999 7763
|
| >3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=97.91 E-value=0.00017 Score=62.12 Aligned_cols=149 Identities=10% Similarity=0.074 Sum_probs=79.6
Q ss_pred eeeEecCCcc-cccCCCCccccccCcceeeeccc-cCCCCCcEEEEEEecCCCccccccCCcccCCCCcccCCCCCeeee
Q psy4579 44 LTAQWLPDVT-SVQLPNEDAQFDASNYDTDKGTH-TSDEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQFD 121 (368)
Q Consensus 44 ~~~~~~p~~~-~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~ 121 (368)
-...|+|+++ .+.++..++.+ +.|+.. |.. ..... ...+..+.+.+.+..+.+ . ..++.|..++.+++..
T Consensus 48 egp~~~~~g~~l~~~d~~~~~i--~~~~~~-g~~~~~~~~-~~~~~gl~~d~dG~l~v~-~---~~~~~v~~~~~~g~~~ 119 (305)
T 3dr2_A 48 EGPAWWEAQRTLVWSDLVGRRV--LGWRED-GTVDVLLDA-TAFTNGNAVDAQQRLVHC-E---HGRRAITRSDADGQAH 119 (305)
T ss_dssp EEEEEEGGGTEEEEEETTTTEE--EEEETT-SCEEEEEES-CSCEEEEEECTTSCEEEE-E---TTTTEEEEECTTSCEE
T ss_pred cCCeEeCCCCEEEEEECCCCEE--EEEeCC-CCEEEEeCC-CCccceeeECCCCCEEEE-E---CCCCEEEEECCCCCEE
Confidence 3588999998 44555555655 333331 211 11100 112334445443332222 1 1245677777665432
Q ss_pred ecc---cc-CCCCceeeEecCCCCCeeEE----EeC-------------CCcEEEEeCCCCCCCCcccccceeeeccccc
Q psy4579 122 ASN---YD-TDKGGYGLSWNPSLNGYLLS----ASD-------------DHTICLWDINATPKENRVIDAKTIFTGHTAV 180 (368)
Q Consensus 122 ~~~---~~-h~~~v~~l~~sp~~~~~las----g~~-------------dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~ 180 (368)
... .+ ....++++.++|+| ++++| |.. .+.|..+|..++.. ..+. ....
T Consensus 120 ~~~~~~~~~~~~~~~~i~~d~dG-~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~--------~~~~-~~~~ 189 (305)
T 3dr2_A 120 LLVGRYAGKRLNSPNDLIVARDG-AIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPL--------QRMA-DLDH 189 (305)
T ss_dssp EEECEETTEECSCCCCEEECTTS-CEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCC--------EEEE-EESS
T ss_pred EEEeccCCCccCCCCCEEECCCC-CEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcE--------EEEe-cCCC
Confidence 111 11 12357789999999 78876 432 24566676655431 2222 2223
Q ss_pred eecceeeEEeCCCCCeEEEeeCC------CcEEEEECCCC
Q psy4579 181 VEVRYGLSWNPSLNGYLLSASDD------HTICLWDINAT 214 (368)
Q Consensus 181 v~~~~~i~~~p~~~~~l~s~s~d------g~i~iwd~~~~ 214 (368)
. ..++|+|+ +..|+.+... +.|.+||+...
T Consensus 190 p---~gl~~spd-g~~lyv~~~~~~~~~~~~i~~~~~~~~ 225 (305)
T 3dr2_A 190 P---NGLAFSPD-EQTLYVSQTPEQGHGSVEITAFAWRDG 225 (305)
T ss_dssp E---EEEEECTT-SSEEEEEECCC---CCCEEEEEEEETT
T ss_pred C---cceEEcCC-CCEEEEEecCCcCCCCCEEEEEEecCC
Confidence 3 28999998 7766666554 78999998654
|
| >1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1 | Back alignment and structure |
|---|
Probab=97.86 E-value=2.9e-05 Score=68.69 Aligned_cols=89 Identities=10% Similarity=-0.173 Sum_probs=58.9
Q ss_pred cccCCCCCe-eeeeccccCCCCceeeEecCCCCCeeEEEe----------CCCcEEEEeCCCCCCCCcccccceeeecc-
Q psy4579 110 NVQLPNEDA-QFDASNYDTDKGGYGLSWNPSLNGYLLSAS----------DDHTICLWDINATPKENRVIDAKTIFTGH- 177 (368)
Q Consensus 110 ~i~i~~~~~-~~~~~~~~h~~~v~~l~~sp~~~~~lasg~----------~dg~v~iwd~~~~~~~~~~~~~~~~~~~h- 177 (368)
.|.+.|.+. +.+..+.--..+ .+.++|++ +.+.++. .++.|.+||..+.+ ....+...
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P--~i~~spDg-~~lyVan~~~~r~~~G~~~~~VsviD~~T~~-------vv~~I~v~~ 116 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGHSG-SDFALASTSFARSAKGKRTDYVEVFDPVTFL-------PIADIELPD 116 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC--EEEECTTS-SCEEEEEEEETTTTSSSEEEEEEEECTTTCC-------EEEEEEETT
T ss_pred eEEEEECCCCeEEEEEeCCCCC--ceEECCCC-CEEEEEcccccccccCCCCCEEEEEECCCCC-------EEEEEECCC
Confidence 566777664 333333222234 79999999 7776665 47899999999875 34444322
Q ss_pred -------ccceecceeeEEeCCCCCeEEEeeC--CCcEEE--EECCC
Q psy4579 178 -------TAVVEVRYGLSWNPSLNGYLLSASD--DHTICL--WDINA 213 (368)
Q Consensus 178 -------~~~v~~~~~i~~~p~~~~~l~s~s~--dg~i~i--wd~~~ 213 (368)
..+ ..++++|+ +.+++.+.. +..|.+ +|+.+
T Consensus 117 ~~~~~~g~~P----~~ia~SpD-Gk~lyVan~~~~~~v~V~~iD~~t 158 (368)
T 1mda_H 117 APRFSVGPRV----HIIGNCAS-SACLLFFLFGSSAAAGLSVPGASD 158 (368)
T ss_dssp SCSCCBSCCT----TSEEECTT-SSCEEEEECSSSCEEEEEETTTEE
T ss_pred ccccccCCCc----ceEEEcCC-CCEEEEEccCCCCeEEEEEEchhh
Confidence 122 38999999 777777764 457888 88855
|
| >3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
Probab=97.84 E-value=0.00035 Score=62.95 Aligned_cols=94 Identities=10% Similarity=-0.072 Sum_probs=63.1
Q ss_pred CcccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEe----------CCCcEEEEeCCCCCCCCcccccceeeecc-
Q psy4579 109 GNVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSAS----------DDHTICLWDINATPKENRVIDAKTIFTGH- 177 (368)
Q Consensus 109 g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~----------~dg~v~iwd~~~~~~~~~~~~~~~~~~~h- 177 (368)
+.|.+.|.....+...+.-...- .+.++|++ +.+..+. .++.|.++|..+.+ ....+.-.
T Consensus 99 ~~VsVID~~t~~vv~~I~vG~~P-gia~SpDg-k~lyVan~~~~~~~~G~~~~~VsviD~~t~~-------vv~~I~v~g 169 (426)
T 3c75_H 99 TQQFVIDGSTGRILGMTDGGFLP-HPVAAEDG-SFFAQASTVFERIARGKRTDYVEVFDPVTFL-------PIADIELPD 169 (426)
T ss_dssp EEEEEEETTTTEEEEEEEECSSC-EEEECTTS-SCEEEEEEEEEETTEEEEEEEEEEECTTTCC-------EEEEEEETT
T ss_pred CeEEEEECCCCEEEEEEECCCCC-ceEECCCC-CEEEEEeccccccccCCCCCEEEEEECCCCc-------EEEEEECCC
Confidence 78888887754433333222222 79999999 6666665 46789999998874 23333211
Q ss_pred ------ccceecceeeEEeCCCCCeEEEeeC--CCcEEEEECCCCC
Q psy4579 178 ------TAVVEVRYGLSWNPSLNGYLLSASD--DHTICLWDINATP 215 (368)
Q Consensus 178 ------~~~v~~~~~i~~~p~~~~~l~s~s~--dg~i~iwd~~~~~ 215 (368)
.... ..+.++|+ +.+++.+.. ++.|.+.|+.+.+
T Consensus 170 ~~r~~~g~~P---~~~~~spD-Gk~lyV~n~~~~~~VsVID~~t~k 211 (426)
T 3c75_H 170 APRFLVGTYQ---WMNALTPD-NKNLLFYQFSPAPAVGVVDLEGKT 211 (426)
T ss_dssp CCCCCBSCCG---GGSEECTT-SSEEEEEECSSSCEEEEEETTTTE
T ss_pred ccccccCCCc---ceEEEcCC-CCEEEEEecCCCCeEEEEECCCCe
Confidence 1112 38999999 888887764 5789999998874
|
| >2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.81 E-value=8.1e-06 Score=72.65 Aligned_cols=96 Identities=9% Similarity=0.017 Sum_probs=49.2
Q ss_pred CCCcccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccc-eecce
Q psy4579 107 KGGNVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAV-VEVRY 185 (368)
Q Consensus 107 ~~g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~-v~~~~ 185 (368)
.||.|..||............ +.+.+..+.+++ ..+++++.||.|+.||..+++. ...+..+... +. .
T Consensus 17 ~dg~v~a~d~~tG~~~W~~~~-~~~~s~p~~~~g-~~~v~~s~dg~l~a~d~~tG~~-------~w~~~~~~~~~~~--~ 85 (369)
T 2hz6_A 17 LDGSLHAVSKRTGSIKWTLKE-DPVLQVPTHVEE-PAFLPDPNDGSLYTLGSKNNEG-------LTKLPFTIPELVQ--A 85 (369)
T ss_dssp TTSEEEEEETTTCCEEEEEEC-CCSCCCC------CCEEECTTTCCEEEC-----CC-------SEECSCCHHHHHT--T
T ss_pred CCCEEEEEECCCCCEEEEecC-CCceecceEcCC-CEEEEeCCCCEEEEEECCCCce-------eeeeeccCccccc--c
Confidence 477888888654333322222 566666667776 7888889999999999987752 2333333211 11 0
Q ss_pred eeEEeCCCCCeEEEeeCCCcEEEEECCCCC
Q psy4579 186 GLSWNPSLNGYLLSASDDHTICLWDINATP 215 (368)
Q Consensus 186 ~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~ 215 (368)
+.... . +..+++|+.|+.|..||.++++
T Consensus 86 sp~~~-~-~~~v~~g~~dg~v~a~D~~tG~ 113 (369)
T 2hz6_A 86 SPCRS-S-DGILYMGKKQDIWYVIDLLTGE 113 (369)
T ss_dssp CSCC-------CCCCEEEEEEEEECCC---
T ss_pred CceEe-c-CCEEEEEeCCCEEEEEECCCCc
Confidence 11111 2 5578888999999999999874
|
| >2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* | Back alignment and structure |
|---|
Probab=97.75 E-value=0.0014 Score=54.86 Aligned_cols=151 Identities=9% Similarity=0.025 Sum_probs=89.0
Q ss_pred eeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECC
Q psy4579 133 GLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDIN 212 (368)
Q Consensus 133 ~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~ 212 (368)
.+++. +..+.++.-.++.+.++|..+.+ .+..+..- .+. ....+++ +..++.+..++.|.+.|..
T Consensus 70 Gi~~~--g~~lyv~t~~~~~v~viD~~t~~-------v~~~i~~g-~~~----g~glt~D-g~~l~vs~gs~~l~viD~~ 134 (266)
T 2iwa_A 70 GLTLL--NEKLYQVVWLKNIGFIYDRRTLS-------NIKNFTHQ-MKD----GWGLATD-GKILYGSDGTSILYEIDPH 134 (266)
T ss_dssp EEEEE--TTEEEEEETTCSEEEEEETTTTE-------EEEEEECC-SSS----CCEEEEC-SSSEEEECSSSEEEEECTT
T ss_pred EEEEe--CCEEEEEEecCCEEEEEECCCCc-------EEEEEECC-CCC----eEEEEEC-CCEEEEECCCCeEEEEECC
Confidence 34444 42566666678999999998764 33444322 122 3334556 5555555578899999998
Q ss_pred CCCCCCccccceeeeec--ccc---cEeEEEEeeecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCC
Q psy4579 213 ATPKENRVIDAKTIFTG--HTA---VVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSV 287 (368)
Q Consensus 213 ~~~~~~~~~~~~~~~~~--~~~---~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 287 (368)
+.. ....+.- ... ..+.+.|.. .++|... + ..+.+...|..
T Consensus 135 t~~-------v~~~I~Vg~~~~p~~~~nele~~d-----------g~lyvn~--------------~--~~~~V~vID~~ 180 (266)
T 2iwa_A 135 TFK-------LIKKHNVKYNGHRVIRLNELEYIN-----------GEVWANI--------------W--QTDCIARISAK 180 (266)
T ss_dssp TCC-------EEEEEECEETTEECCCEEEEEEET-----------TEEEEEE--------------T--TSSEEEEEETT
T ss_pred CCc-------EEEEEEECCCCcccccceeEEEEC-----------CEEEEec--------------C--CCCeEEEEECC
Confidence 763 2232221 111 133333321 1233221 1 12335556666
Q ss_pred CCceeeeeecCc------------ccceeEEEEeCCCCcEEEEecCCCeEEEEECCC
Q psy4579 288 SGKIEIEIKINH------------EGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 288 ~~~~~~~~~~~h------------~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
++++...+..+. ....+.++|+|++..+++|+...+++.+.++..
T Consensus 181 tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 181 DGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHL 237 (266)
T ss_dssp TCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEE
T ss_pred CCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEec
Confidence 677666554320 135589999999989999999999999999875
|
| >3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=97.66 E-value=0.0021 Score=55.17 Aligned_cols=73 Identities=12% Similarity=0.150 Sum_probs=52.7
Q ss_pred CCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcE
Q psy4579 127 TDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTI 206 (368)
Q Consensus 127 h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i 206 (368)
.........|+|++..+++++..++.|..|+.. +. ...+..+...+. ++++.++ +.++++...++.|
T Consensus 43 ~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g~--------~~~~~~~~~~~~---gl~~d~d-G~l~v~~~~~~~v 109 (305)
T 3dr2_A 43 QATWSEGPAWWEAQRTLVWSDLVGRRVLGWRED-GT--------VDVLLDATAFTN---GNAVDAQ-QRLVHCEHGRRAI 109 (305)
T ss_dssp CCSSEEEEEEEGGGTEEEEEETTTTEEEEEETT-SC--------EEEEEESCSCEE---EEEECTT-SCEEEEETTTTEE
T ss_pred CCcCccCCeEeCCCCEEEEEECCCCEEEEEeCC-CC--------EEEEeCCCCccc---eeeECCC-CCEEEEECCCCEE
Confidence 444567789999983377888889999999874 32 234444455554 9999998 7766665566889
Q ss_pred EEEECC
Q psy4579 207 CLWDIN 212 (368)
Q Consensus 207 ~iwd~~ 212 (368)
.+||..
T Consensus 110 ~~~~~~ 115 (305)
T 3dr2_A 110 TRSDAD 115 (305)
T ss_dssp EEECTT
T ss_pred EEECCC
Confidence 999975
|
| >3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=97.58 E-value=0.0074 Score=50.11 Aligned_cols=164 Identities=9% Similarity=0.065 Sum_probs=92.0
Q ss_pred CCCcccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceeccee
Q psy4579 107 KGGNVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYG 186 (368)
Q Consensus 107 ~~g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 186 (368)
.+|.|..+|.+...+.... -..........+.+..+.+....++.+.++|..+.+ .+..+...... +.
T Consensus 73 ~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~-------~~~ti~~~~eG----wG 140 (268)
T 3nok_A 73 HQGTLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQ-------RERTTRYSGEG----WG 140 (268)
T ss_dssp TTTEEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSSCEEEEEETTTTE-------EEEEEECSSCC----CC
T ss_pred CCCEEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccCCEEEEEECCcCc-------EEEEEeCCCce----eE
Confidence 4567888888754333322 334444433333443666666789999999998864 34445432211 36
Q ss_pred eEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeec--ccc---cEeEEEEeeecccccCCCCccceEEEEee
Q psy4579 187 LSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTG--HTA---VVEDYSIHRLILGTHTSDEQNHLLIASVQ 261 (368)
Q Consensus 187 i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~--~~~---~v~~v~~~~~~~~~~~~d~~~~~~~~~~~ 261 (368)
+++ + +..|+.+..++.|.++|..+.. ....+.- +.. .++.+.|.. .++|+.
T Consensus 141 Lt~--D-g~~L~vSdGs~~l~~iDp~T~~-------v~~~I~V~~~g~~v~~lNeLe~~d-----------G~lyan--- 196 (268)
T 3nok_A 141 LCY--W-NGKLVRSDGGTMLTFHEPDGFA-------LVGAVQVKLRGQPVELINELECAN-----------GVIYAN--- 196 (268)
T ss_dssp EEE--E-TTEEEEECSSSEEEEECTTTCC-------EEEEEECEETTEECCCEEEEEEET-----------TEEEEE---
T ss_pred Eec--C-CCEEEEECCCCEEEEEcCCCCe-------EEEEEEeCCCCcccccccccEEeC-----------CEEEEE---
Confidence 664 4 5566665668999999998863 2233221 111 223344421 123321
Q ss_pred cCCcccccccccccCCCCCcccccCCCCceeeeeecC------------cccceeEEEEeCCCCcEEEEe
Q psy4579 262 LPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKIN------------HEGEVNRARYMPQNPCVIATK 319 (368)
Q Consensus 262 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~------------h~~~i~~~~~~p~~~~~lasg 319 (368)
.|. +..+...|..++++...+..+ -..-.+.|+++|++..+++||
T Consensus 197 -----------vw~--s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 197 -----------IWH--SSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp -----------ETT--CSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred -----------ECC--CCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 121 123455555666665544321 113559999999988999887
|
| >2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
Probab=97.53 E-value=0.0027 Score=55.51 Aligned_cols=77 Identities=13% Similarity=0.084 Sum_probs=52.3
Q ss_pred CCCCceeeEecCCCCCeeEEEeC-----CCcEEEEeCCCCCCCCcccccceeeec------cccceecceeeEEeCCCCC
Q psy4579 127 TDKGGYGLSWNPSLNGYLLSASD-----DHTICLWDINATPKENRVIDAKTIFTG------HTAVVEVRYGLSWNPSLNG 195 (368)
Q Consensus 127 h~~~v~~l~~sp~~~~~lasg~~-----dg~v~iwd~~~~~~~~~~~~~~~~~~~------h~~~v~~~~~i~~~p~~~~ 195 (368)
|-..+.++++++++ +++++-.. ++.|.+||+.+++ ....+.. +...+. .+++.|+++.
T Consensus 65 ~~~~p~gv~~d~~g-~L~v~D~g~~~~~~~~i~~~d~~tg~-------~~~~~~~~~~~~~~~~~~~---~v~vd~~~g~ 133 (343)
T 2qe8_A 65 TFDTVLGIKSDGNG-IVWMLDNGNQSKSVPKLVAWDTLNNQ-------LSRVIYLPPPITLSNSFVN---DLAVDLIHNF 133 (343)
T ss_dssp CCSCEEEEEECSSS-EEEEEECHHHHTSCCEEEEEETTTTE-------EEEEEECCTTTSCTTCCCC---EEEEETTTTE
T ss_pred ceeEeeEEEEcCCC-cEEEEcCCCCcCCCCeEEEEECCCCe-------EEEEEECChhhcccccccc---eEEEecCCCE
Confidence 55678999999998 76666543 5789999998763 1222221 122333 8899986344
Q ss_pred eEEEee---CCCcEEEEECCCC
Q psy4579 196 YLLSAS---DDHTICLWDINAT 214 (368)
Q Consensus 196 ~l~s~s---~dg~i~iwd~~~~ 214 (368)
.+++.+ .++.|.+||+.++
T Consensus 134 ~yvtd~~~~~~~~i~v~d~~~g 155 (343)
T 2qe8_A 134 VYISDPAPDDKAALIRVDLQTG 155 (343)
T ss_dssp EEEEECCSGGGCEEEEEETTTC
T ss_pred EEEEcCccCCCCeEEEEECCCC
Confidence 556655 6889999999765
|
| >2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
Probab=97.50 E-value=0.0023 Score=56.05 Aligned_cols=118 Identities=8% Similarity=-0.019 Sum_probs=62.5
Q ss_pred ceeeEecCCcccccCCC--CccccccCcceeeecccc------CC-CCCcEEEEEEecCCCccccccCCc-ccCCCCccc
Q psy4579 43 SLTAQWLPDVTSVQLPN--EDAQFDASNYDTDKGTHT------SD-EQNHLLIASVQLPNEDAQFDASNY-DTDKGGNVQ 112 (368)
Q Consensus 43 ~~~~~~~p~~~~l~~~~--~~~~~~~~~~~~~~~~~~------~~-~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~g~i~ 112 (368)
...++++|+|+.+++.. .++.+.++..+ .|... .. ......+..+.+.+.+..+.+..- ....++.|.
T Consensus 19 p~~va~~~~g~~~v~~~~~~~~~~~l~~~~--~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~ 96 (343)
T 2qe8_A 19 PGNITLTPDGRLFLSLHQFYQPEMQVAELT--QDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLV 96 (343)
T ss_dssp EEEEEECTTSCEEEEECGGGCCSCSEEEEE--TTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEE
T ss_pred cceEEECCCCCEEEEeCCCCCCceEEEEEC--CCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEE
Confidence 44599999999887742 22323334333 22211 01 111234556666544332221110 000146788
Q ss_pred CCCCC-eeeeeccc------cCCCCceeeEecCCCCCeeEEEe---CCCcEEEEeCCCCC
Q psy4579 113 LPNED-AQFDASNY------DTDKGGYGLSWNPSLNGYLLSAS---DDHTICLWDINATP 162 (368)
Q Consensus 113 i~~~~-~~~~~~~~------~h~~~v~~l~~sp~~~~~lasg~---~dg~v~iwd~~~~~ 162 (368)
+|+.. ++...... .+...+..++++|++...+++.. .++.|.+||+.++.
T Consensus 97 ~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~ 156 (343)
T 2qe8_A 97 AWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGL 156 (343)
T ss_dssp EEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCC
T ss_pred EEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCC
Confidence 88875 33232221 23345689999986525566665 68899999987653
|
| >3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=97.46 E-value=0.0061 Score=50.04 Aligned_cols=93 Identities=10% Similarity=0.074 Sum_probs=53.3
Q ss_pred CcccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeE
Q psy4579 109 GNVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLS 188 (368)
Q Consensus 109 g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~ 188 (368)
..|...|.....+.....-..........+.+..+.+....++.+.++|..+.+ .+.++...... +.++
T Consensus 43 S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~-------~~~ti~~~~~G----wglt 111 (243)
T 3mbr_X 43 SSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLT-------PRARFRYPGEG----WALT 111 (243)
T ss_dssp CEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTTE-------EEEEEECSSCC----CEEE
T ss_pred ceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEEEEECCcCc-------EEEEEeCCCCc----eEEe
Confidence 356666665433333223233333333333343566666789999999998864 34455432222 3565
Q ss_pred EeCCCCCeEEEeeCCCcEEEEECCCCC
Q psy4579 189 WNPSLNGYLLSASDDHTICLWDINATP 215 (368)
Q Consensus 189 ~~p~~~~~l~s~s~dg~i~iwd~~~~~ 215 (368)
++ +..|+.+..++.|.++|..+..
T Consensus 112 --~d-g~~L~vSdgs~~l~~iDp~t~~ 135 (243)
T 3mbr_X 112 --SD-DSHLYMSDGTAVIRKLDPDTLQ 135 (243)
T ss_dssp --EC-SSCEEEECSSSEEEEECTTTCC
T ss_pred --eC-CCEEEEECCCCeEEEEeCCCCe
Confidence 45 4444444558899999998863
|
| >1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1 | Back alignment and structure |
|---|
Probab=97.40 E-value=0.026 Score=47.11 Aligned_cols=75 Identities=13% Similarity=0.080 Sum_probs=49.5
Q ss_pred CceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEE
Q psy4579 130 GGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLW 209 (368)
Q Consensus 130 ~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iw 209 (368)
....++|++++..++++-..++.|..++...... .......-.... .+++.|+++.+.++-...+.|.++
T Consensus 37 ~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~-------~~~~~~~~~~p~---~ia~d~~~~~lyv~d~~~~~I~~~ 106 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEP-------TTIIRQDLGSPE---GIALDHLGRTIFWTDSQLDRIEVA 106 (267)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEESSSCCC-------EEEECTTCCCEE---EEEEETTTTEEEEEETTTTEEEEE
T ss_pred cEEEEEEecCCCEEEEEECCCCEEEEEecCCCCc-------EEEEECCCCCcc---EEEEEecCCeEEEEECCCCEEEEE
Confidence 4678999997635666666788999999876431 122221112232 899998735555666667899999
Q ss_pred ECCCC
Q psy4579 210 DINAT 214 (368)
Q Consensus 210 d~~~~ 214 (368)
|+...
T Consensus 107 ~~~g~ 111 (267)
T 1npe_A 107 KMDGT 111 (267)
T ss_dssp ETTSC
T ss_pred EcCCC
Confidence 98653
|
| >2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.39 E-value=0.00011 Score=65.40 Aligned_cols=61 Identities=10% Similarity=0.050 Sum_probs=39.3
Q ss_pred CeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCC
Q psy4579 142 GYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATP 215 (368)
Q Consensus 142 ~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~ 215 (368)
..+++++.||.|+.||..+++ ....+.. +.+. +..+..+ +..+++++.||.|..||..+++
T Consensus 10 ~~v~~gs~dg~v~a~d~~tG~-------~~W~~~~--~~~~---s~p~~~~-g~~~v~~s~dg~l~a~d~~tG~ 70 (369)
T 2hz6_A 10 TLLFVSTLDGSLHAVSKRTGS-------IKWTLKE--DPVL---QVPTHVE-EPAFLPDPNDGSLYTLGSKNNE 70 (369)
T ss_dssp TEEEEEETTSEEEEEETTTCC-------EEEEEEC--CCSC---CCC------CCEEECTTTCCEEEC-----C
T ss_pred CEEEEEcCCCEEEEEECCCCC-------EEEEecC--CCce---ecceEcC-CCEEEEeCCCCEEEEEECCCCc
Confidence 789999999999999999885 3344544 3442 4445555 6688888999999999998774
|
| >3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A | Back alignment and structure |
|---|
Probab=97.39 E-value=0.0094 Score=49.43 Aligned_cols=92 Identities=11% Similarity=0.149 Sum_probs=54.8
Q ss_pred cccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEE
Q psy4579 110 NVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSW 189 (368)
Q Consensus 110 ~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~ 189 (368)
.|...|.....+.....-..........+.+..+.+....++.+.++|..+.+ .+..+.-.... +.++
T Consensus 66 ~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~-------~~~ti~~~~eG----~glt- 133 (262)
T 3nol_A 66 SIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLR-------QVRSFNYDGEG----WGLT- 133 (262)
T ss_dssp EEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTCC-------EEEEEECSSCC----CCEE-
T ss_pred eEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEEEEEECccCc-------EEEEEECCCCc----eEEe-
Confidence 67777776533333333334444433344453555666678999999998875 34445432211 2555
Q ss_pred eCCCCCeEEEeeCCCcEEEEECCCCC
Q psy4579 190 NPSLNGYLLSASDDHTICLWDINATP 215 (368)
Q Consensus 190 ~p~~~~~l~s~s~dg~i~iwd~~~~~ 215 (368)
++ +..|+.+..++.|.++|..+..
T Consensus 134 -~d-g~~L~~SdGs~~i~~iDp~T~~ 157 (262)
T 3nol_A 134 -HN-DQYLIMSDGTPVLRFLDPESLT 157 (262)
T ss_dssp -EC-SSCEEECCSSSEEEEECTTTCS
T ss_pred -cC-CCEEEEECCCCeEEEEcCCCCe
Confidence 45 4555555557889999998863
|
| >3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A | Back alignment and structure |
|---|
Probab=97.33 E-value=0.019 Score=47.54 Aligned_cols=160 Identities=13% Similarity=0.074 Sum_probs=88.8
Q ss_pred eccccCCCCc--eeeEecCCCCCeeEEEeCCC--cEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeE
Q psy4579 122 ASNYDTDKGG--YGLSWNPSLNGYLLSASDDH--TICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYL 197 (368)
Q Consensus 122 ~~~~~h~~~v--~~l~~sp~~~~~lasg~~dg--~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l 197 (368)
...+.|...- ..|.|+ ++ .++.+.+.+| .|+++|+.+++. ...+........ -.++. .++.+.
T Consensus 34 v~~~phd~~~ftqGL~~~-~~-~LyestG~~g~S~v~~vD~~Tgkv-------~~~~~l~~~~Fg--eGit~--~g~~ly 100 (262)
T 3nol_A 34 VHSYPHDTKAFTEGFFYR-NG-YFYESTGLNGRSSIRKVDIESGKT-------LQQIELGKRYFG--EGISD--WKDKIV 100 (262)
T ss_dssp EEEEECCTTCEEEEEEEE-TT-EEEEEEEETTEEEEEEECTTTCCE-------EEEEECCTTCCE--EEEEE--ETTEEE
T ss_pred EEEecCCCCcccceEEEE-CC-EEEEECCCCCCceEEEEECCCCcE-------EEEEecCCccce--eEEEE--eCCEEE
Confidence 3445676554 789998 66 7888888876 899999998852 333332222210 03444 324444
Q ss_pred EEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeeecccccCCCCccceEEEEeecCCcccccccccccCC
Q psy4579 198 LSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTD 277 (368)
Q Consensus 198 ~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~ 277 (368)
+..-.++.+.+||..+.. .+..+.... .-..+++.. ..+++. |.
T Consensus 101 ~ltw~~~~v~v~D~~t~~-------~~~ti~~~~-eG~glt~dg-----------~~L~~S----------------dG- 144 (262)
T 3nol_A 101 GLTWKNGLGFVWNIRNLR-------QVRSFNYDG-EGWGLTHND-----------QYLIMS----------------DG- 144 (262)
T ss_dssp EEESSSSEEEEEETTTCC-------EEEEEECSS-CCCCEEECS-----------SCEEEC----------------CS-
T ss_pred EEEeeCCEEEEEECccCc-------EEEEEECCC-CceEEecCC-----------CEEEEE----------------CC-
Confidence 444568899999998863 344443211 112233321 111111 00
Q ss_pred CCCcccccCCCCceeeeeecC---cc-cceeEEEEeCCCCcEEEEecCCCeEEEEECCC
Q psy4579 278 KGDFGGFGSVSGKIEIEIKIN---HE-GEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~---h~-~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
++.+..+|..+.+....+..+ +. ..++.+.|. +| .+.|..-.+..|.+.|.++
T Consensus 145 s~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G-~lyan~w~~~~I~vIDp~t 201 (262)
T 3nol_A 145 TPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DG-EIFANVWQTNKIVRIDPET 201 (262)
T ss_dssp SSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TT-EEEEEETTSSEEEEECTTT
T ss_pred CCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CC-EEEEEEccCCeEEEEECCC
Confidence 122333444445554444332 12 345667887 66 6887766788999999875
|
| >2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* | Back alignment and structure |
|---|
Probab=97.28 E-value=0.059 Score=44.96 Aligned_cols=160 Identities=10% Similarity=0.003 Sum_probs=91.2
Q ss_pred eccccCCCC--ceeeEecCCCCCeeEEEeC--CCcEEEEeCCCCCCCCcccccceeee--ccccceecceeeEEeCCCCC
Q psy4579 122 ASNYDTDKG--GYGLSWNPSLNGYLLSASD--DHTICLWDINATPKENRVIDAKTIFT--GHTAVVEVRYGLSWNPSLNG 195 (368)
Q Consensus 122 ~~~~~h~~~--v~~l~~sp~~~~~lasg~~--dg~v~iwd~~~~~~~~~~~~~~~~~~--~h~~~v~~~~~i~~~p~~~~ 195 (368)
...+.|... ...+.|+|++ .++++.+. ++.|++.|+.+++ ....+. .+.... .+++.. +.
T Consensus 12 v~~~p~~~~~f~~Gl~~~~dg-~Lyvstg~~~~s~v~~iD~~tg~-------v~~~i~l~~~~fge----Gi~~~g--~~ 77 (266)
T 2iwa_A 12 LNEFPHDPYAFTQGLVYAEND-TLFESTGLYGRSSVRQVALQTGK-------VENIHKMDDSYFGE----GLTLLN--EK 77 (266)
T ss_dssp EEEEECCTTCCEEEEEECSTT-EEEEEECSTTTCEEEEEETTTCC-------EEEEEECCTTCCEE----EEEEET--TE
T ss_pred EEEEECCCCCCcccEEEeCCC-eEEEECCCCCCCEEEEEECCCCC-------EEEEEecCCCcceE----EEEEeC--CE
Confidence 344466654 5789999987 66666554 6899999999875 233332 222221 455542 45
Q ss_pred eEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeeecccccCCCCccceEEEEeecCCccccccccccc
Q psy4579 196 YLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYD 275 (368)
Q Consensus 196 ~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d 275 (368)
+.++.-.++.+.++|..+. +.+..+..-...-..++... .++++..
T Consensus 78 lyv~t~~~~~v~viD~~t~-------~v~~~i~~g~~~g~glt~Dg-----------~~l~vs~---------------- 123 (266)
T 2iwa_A 78 LYQVVWLKNIGFIYDRRTL-------SNIKNFTHQMKDGWGLATDG-----------KILYGSD---------------- 123 (266)
T ss_dssp EEEEETTCSEEEEEETTTT-------EEEEEEECCSSSCCEEEECS-----------SSEEEEC----------------
T ss_pred EEEEEecCCEEEEEECCCC-------cEEEEEECCCCCeEEEEECC-----------CEEEEEC----------------
Confidence 5555567889999999876 23343321101111233221 1122111
Q ss_pred CCCCCcccccCCCCceeeeeecCcc----cceeEEEEeCCCCcEEEEecCCCeEEEEECCC
Q psy4579 276 TDKGDFGGFGSVSGKIEIEIKINHE----GEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~h~----~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
.++.+..+|..+.+....+..+.. ..++.+.|. ++ .+++....++.|.+.|..+
T Consensus 124 -gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg-~lyvn~~~~~~V~vID~~t 181 (266)
T 2iwa_A 124 -GTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NG-EVWANIWQTDCIARISAKD 181 (266)
T ss_dssp -SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TT-EEEEEETTSSEEEEEETTT
T ss_pred -CCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CC-EEEEecCCCCeEEEEECCC
Confidence 122344444555555555443211 236788888 66 6887877789999999975
|
| >3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=97.15 E-value=0.073 Score=43.63 Aligned_cols=159 Identities=11% Similarity=0.070 Sum_probs=86.9
Q ss_pred ccccCCCC--ceeeEecCCCCCeeEEEeCCC--cEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEE
Q psy4579 123 SNYDTDKG--GYGLSWNPSLNGYLLSASDDH--TICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLL 198 (368)
Q Consensus 123 ~~~~h~~~--v~~l~~sp~~~~~lasg~~dg--~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~ 198 (368)
..+.|+.. ...|.|++ + .++.+.+.+| .|+.+|+.+++. .....-...... -.++... +.+.+
T Consensus 13 ~~~phd~~~ftqGL~~~~-~-~LyestG~~g~S~v~~vD~~tgkv-------~~~~~l~~~~fg--eGi~~~~--~~ly~ 79 (243)
T 3mbr_X 13 KRYPHDTTAFTEGLFYLR-G-HLYESTGETGRSSVRKVDLETGRI-------LQRAEVPPPYFG--AGIVAWR--DRLIQ 79 (243)
T ss_dssp EEEECCTTCCEEEEEEET-T-EEEEEECCTTSCEEEEEETTTCCE-------EEEEECCTTCCE--EEEEEET--TEEEE
T ss_pred EEcCCCCccccccEEEEC-C-EEEEECCCCCCceEEEEECCCCCE-------EEEEeCCCCcce--eEEEEeC--CEEEE
Confidence 34467654 56899987 4 6777777764 899999998852 333332222210 1444432 45555
Q ss_pred EeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeeecccccCCCCccceEEEEeecCCcccccccccccCCC
Q psy4579 199 SASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDK 278 (368)
Q Consensus 199 s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 278 (368)
..-.++.+.+||..+. +.+.++..... -..++... .++++.. .+
T Consensus 80 ltw~~~~v~v~D~~tl-------~~~~ti~~~~~-Gwglt~dg-----------~~L~vSd-----------------gs 123 (243)
T 3mbr_X 80 LTWRNHEGFVYDLATL-------TPRARFRYPGE-GWALTSDD-----------SHLYMSD-----------------GT 123 (243)
T ss_dssp EESSSSEEEEEETTTT-------EEEEEEECSSC-CCEEEECS-----------SCEEEEC-----------------SS
T ss_pred EEeeCCEEEEEECCcC-------cEEEEEeCCCC-ceEEeeCC-----------CEEEEEC-----------------CC
Confidence 5567899999999886 33444442211 12333321 1222111 01
Q ss_pred CCcccccCCCCceeeeeecC-cc---cceeEEEEeCCCCcEEEEecCCCeEEEEECCC
Q psy4579 279 GDFGGFGSVSGKIEIEIKIN-HE---GEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~-h~---~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
+.+..+|..+.+....+..+ +. ..++.+.|. +| .++|..-.+..|.+.|.++
T Consensus 124 ~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G-~lyanvw~s~~I~vIDp~t 179 (243)
T 3mbr_X 124 AVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NG-ELLANVWLTSRIARIDPAS 179 (243)
T ss_dssp SEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TT-EEEEEETTTTEEEEECTTT
T ss_pred CeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CC-EEEEEECCCCeEEEEECCC
Confidence 22333444444444444322 11 245666766 55 5776665677888888865
|
| >3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=97.10 E-value=0.067 Score=47.51 Aligned_cols=180 Identities=8% Similarity=-0.012 Sum_probs=93.6
Q ss_pred cccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeee-ccccceecceeeE
Q psy4579 110 NVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFT-GHTAVVEVRYGLS 188 (368)
Q Consensus 110 ~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~i~ 188 (368)
.|...++++.....+.........++|++.+..++.+-...+.|..+++..... ...+. +-..+. .++
T Consensus 97 ~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~-------~~~~~~~~~~p~----gla 165 (386)
T 3v65_B 97 DIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNV-------EEVVSTGLESPG----GLA 165 (386)
T ss_dssp CEEEECTTSCCCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCE-------EEEECSSCSCCC----CEE
T ss_pred cceeeccCCCcEEEEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCc-------EEEEeCCCCCcc----EEE
Confidence 344444444332233333445788999986535666666778899999876531 11122 112222 788
Q ss_pred EeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeeecccccCCCCccceEEEEeecCCcccc
Q psy4579 189 WNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQ 268 (368)
Q Consensus 189 ~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 268 (368)
+.+..+.+.++-...+.|.+.++..... ...+...-..-+.++++|. ...++..... .
T Consensus 166 vd~~~g~lY~~d~~~~~I~~~~~dg~~~-------~~l~~~~l~~P~giavdp~---------~g~ly~td~~---~--- 223 (386)
T 3v65_B 166 VDWVHDKLYWTDSGTSRIEVANLDGAHR-------KVLLWQSLEKPRAIALHPM---------EGTIYWTDWG---N--- 223 (386)
T ss_dssp EETTTTEEEEEETTTTEEEECBTTSCSC-------EEEECSSCSCEEEEEEETT---------TTEEEEEECS---S---
T ss_pred EEeCCCeEEEEcCCCCeEEEEeCCCCce-------EEeecCCCCCCcEEEEEcC---------CCeEEEeccC---C---
Confidence 8876455666666678888888765421 1112212233455666531 0112211100 0
Q ss_pred cccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCC
Q psy4579 269 FDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 269 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
.+.+..+++. |.....+........+.++++|++..++.+-+..+.|..+|+..
T Consensus 224 ---------~~~I~r~~~d-G~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG 277 (386)
T 3v65_B 224 ---------TPRIEASSMD-GSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDG 277 (386)
T ss_dssp ---------SCEEEEEETT-SCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTS
T ss_pred ---------CCEEEEEeCC-CCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCC
Confidence 0011111111 11111111122335688999987767887777788999999863
|
| >3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=97.06 E-value=0.059 Score=44.69 Aligned_cols=159 Identities=11% Similarity=0.055 Sum_probs=90.8
Q ss_pred eeccccCCCC--ceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceee-eccccceecceeeEEeCCCCCeE
Q psy4579 121 DASNYDTDKG--GYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIF-TGHTAVVEVRYGLSWNPSLNGYL 197 (368)
Q Consensus 121 ~~~~~~h~~~--v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~i~~~p~~~~~l 197 (368)
+...+.|... ...|.|+. + .++.+.+.+|.|+++|+++++. ...+ ...-... .++... +.+.
T Consensus 45 Vv~~~phd~~~ftqGL~~~~-~-~Ly~stG~~g~v~~iD~~Tgkv-------~~~~l~~~~Fge----Git~~g--~~Ly 109 (268)
T 3nok_A 45 IIREYPHATNAFTQGLVFHQ-G-HFFESTGHQGTLRQLSLESAQP-------VWMERLGNIFAE----GLASDG--ERLY 109 (268)
T ss_dssp EEEEEECCTTCCEEEEEEET-T-EEEEEETTTTEEEECCSSCSSC-------SEEEECTTCCEE----EEEECS--SCEE
T ss_pred EEEEEcCCCccccceEEEEC-C-EEEEEcCCCCEEEEEECCCCcE-------EeEECCCCccee----EEEEeC--CEEE
Confidence 3344567654 46888884 4 7888889999999999998863 2333 2211111 355432 5555
Q ss_pred EEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeeecccccCCCCccceEEEEeecCCcccccccccccCC
Q psy4579 198 LSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTD 277 (368)
Q Consensus 198 ~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~ 277 (368)
+..-.++.+.+||..+. +.+..+... ..-..+++.. .++++.. .
T Consensus 110 ~ltw~~~~v~V~D~~Tl-------~~~~ti~~~-~eGwGLt~Dg-----------~~L~vSd-----------------G 153 (268)
T 3nok_A 110 QLTWTEGLLFTWSGMPP-------QRERTTRYS-GEGWGLCYWN-----------GKLVRSD-----------------G 153 (268)
T ss_dssp EEESSSCEEEEEETTTT-------EEEEEEECS-SCCCCEEEET-----------TEEEEEC-----------------S
T ss_pred EEEccCCEEEEEECCcC-------cEEEEEeCC-CceeEEecCC-----------CEEEEEC-----------------C
Confidence 56667899999999886 334444421 1112333331 1122111 1
Q ss_pred CCCcccccCCCCceeeeeecC-cc---cceeEEEEeCCCCcEEEEecCCCeEEEEECCC
Q psy4579 278 KGDFGGFGSVSGKIEIEIKIN-HE---GEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~-h~---~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
++.+..+|..+.+....+... +. ..++.+.|. +| .++|..-.+..|.+.|.++
T Consensus 154 s~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG-~lyanvw~s~~I~vIDp~T 210 (268)
T 3nok_A 154 GTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NG-VIYANIWHSSDVLEIDPAT 210 (268)
T ss_dssp SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TT-EEEEEETTCSEEEEECTTT
T ss_pred CCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CC-EEEEEECCCCeEEEEeCCC
Confidence 122333444445544444321 21 245777877 66 6887776788999999875
|
| >3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=97.04 E-value=0.14 Score=44.68 Aligned_cols=162 Identities=9% Similarity=0.004 Sum_probs=87.5
Q ss_pred CCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeee-ccccceecceeeEEeCCCCCeEEEeeCCCcE
Q psy4579 128 DKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFT-GHTAVVEVRYGLSWNPSLNGYLLSASDDHTI 206 (368)
Q Consensus 128 ~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i 206 (368)
......++|++....++.+-...+.|..+++..... ...+. +-..+. .+++.+..+.+.++-...+.|
T Consensus 72 ~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~-------~~~~~~~~~~p~----glavd~~~g~ly~~d~~~~~I 140 (349)
T 3v64_C 72 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNV-------EEVVSTGLESPG----GLAVDWVHDKLYWTDSGTSRI 140 (349)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-------EEEECSSCSCCC----EEEEETTTTEEEEEETTTTEE
T ss_pred CCceEEEEEeccccEEEEEeccCCceEEEecCCCCc-------eEEEeCCCCCcc----EEEEecCCCeEEEEcCCCCeE
Confidence 345788999986635666666778899999876531 12122 122232 788887645666666677899
Q ss_pred EEEECCCCCCCCccccceeeeecccccEeEEEEeeecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccC
Q psy4579 207 CLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGS 286 (368)
Q Consensus 207 ~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 286 (368)
.+.++..... ...+...-..-+.++++|. ...++..... . .+.+..+++
T Consensus 141 ~~~~~dG~~~-------~~l~~~~l~~P~~iavdp~---------~g~ly~td~~---~------------~~~I~r~~~ 189 (349)
T 3v64_C 141 EVANLDGAHR-------KVLLWQSLEKPRAIALHPM---------EGTIYWTDWG---N------------TPRIEASSM 189 (349)
T ss_dssp EEEETTSCSC-------EEEECTTCSCEEEEEEETT---------TTEEEEEECS---S------------SCEEEEEET
T ss_pred EEEcCCCCce-------EEEEeCCCCCcceEEEecC---------cCeEEEeccC---C------------CCEEEEEeC
Confidence 9999875421 1112222233456666541 0112211100 0 000111111
Q ss_pred CCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCC
Q psy4579 287 VSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 287 ~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
. |.....+....-...+.++++|++..++.+-+..+.|..+|+..
T Consensus 190 d-G~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG 234 (349)
T 3v64_C 190 D-GSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDG 234 (349)
T ss_dssp T-SCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred C-CCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCC
Confidence 1 11111111112335688999997767887777788999999863
|
| >3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=96.97 E-value=0.023 Score=48.87 Aligned_cols=86 Identities=13% Similarity=0.013 Sum_probs=48.5
Q ss_pred ccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEe
Q psy4579 111 VQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWN 190 (368)
Q Consensus 111 i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~ 190 (368)
+..++.+++.................. + ..+..++.++.+..+|.. +. .......+...+. ++...
T Consensus 80 l~~~d~~g~~~~~~~~~~~~~~~~~~~-~--~~l~v~t~~~~l~~~d~~-g~-------~~~~~~~~~~~~~---~~~~~ 145 (330)
T 3hxj_A 80 VYAINPDGTEKWRFDTKKAIVSDFTIF-E--DILYVTSMDGHLYAINTD-GT-------EKWRFKTKKAIYA---TPIVS 145 (330)
T ss_dssp EEEECCCGGGGGGSCC-----CCEEEE-T--TEEEEECTTSEEEEECTT-SC-------EEEEEECSSCCCS---CCEEC
T ss_pred EEEECCCCcEEEEEECCCCcccCceEE-C--CEEEEEecCCEEEEEcCC-CC-------EEEEEcCCCceee---eeEEc
Confidence 555665443322222222223333343 3 567778889999999987 43 2233333333343 66666
Q ss_pred CCCCCeEEEeeCCCcEEEEECC
Q psy4579 191 PSLNGYLLSASDDHTICLWDIN 212 (368)
Q Consensus 191 p~~~~~l~s~s~dg~i~iwd~~ 212 (368)
++ +. +..++.++.|..+|..
T Consensus 146 ~~-g~-l~vgt~~~~l~~~d~~ 165 (330)
T 3hxj_A 146 ED-GT-IYVGSNDNYLYAINPD 165 (330)
T ss_dssp TT-SC-EEEECTTSEEEEECTT
T ss_pred CC-CE-EEEEcCCCEEEEECCC
Confidence 54 44 6667888999999987
|
| >1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=96.95 E-value=0.036 Score=53.28 Aligned_cols=51 Identities=14% Similarity=0.222 Sum_probs=38.6
Q ss_pred CCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCC
Q psy4579 279 GDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
+.+..+|..+++...... +..++....+...+ .++..++.||.+++||.++
T Consensus 457 g~l~A~D~~tG~~~W~~~--~~~~~~~g~~~~~g-~~v~~g~~dg~l~a~D~~t 507 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWSVE--HVSPWNGGTLTTAG-NVVFQGTADGRLVAYHAAT 507 (677)
T ss_dssp EEEEEEETTTTEEEEEEE--ESSSCCCCEEEETT-TEEEEECTTSEEEEEETTT
T ss_pred cEEEEEeCCCCcEEeecC--CCCCCcCcceEeCC-CEEEEECCCCcEEEEECCC
Confidence 567788888998887765 34455556677777 4566789999999999976
|
| >3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=96.86 E-value=0.043 Score=47.09 Aligned_cols=90 Identities=11% Similarity=-0.013 Sum_probs=55.4
Q ss_pred CCCcccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceeccee
Q psy4579 107 KGGNVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYG 186 (368)
Q Consensus 107 ~~g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 186 (368)
.+|.+..++.+++...........+.++...+++ . +..++.++.+..+|.. +. ....+......+. +
T Consensus 115 ~~~~l~~~d~~g~~~~~~~~~~~~~~~~~~~~~g-~-l~vgt~~~~l~~~d~~-g~-------~~~~~~~~~~~~~---~ 181 (330)
T 3hxj_A 115 MDGHLYAINTDGTEKWRFKTKKAIYATPIVSEDG-T-IYVGSNDNYLYAINPD-GT-------EKWRFKTNDAITS---A 181 (330)
T ss_dssp TTSEEEEECTTSCEEEEEECSSCCCSCCEECTTS-C-EEEECTTSEEEEECTT-SC-------EEEEEECSSCCCS---C
T ss_pred cCCEEEEEcCCCCEEEEEcCCCceeeeeEEcCCC-E-EEEEcCCCEEEEECCC-CC-------EeEEEecCCCcee---e
Confidence 3566777777644433333345556777777776 4 6667788999999987 43 2233333334443 6
Q ss_pred eEEeCCCCCeEEEeeCCCcEEEEECCCC
Q psy4579 187 LSWNPSLNGYLLSASDDHTICLWDINAT 214 (368)
Q Consensus 187 i~~~p~~~~~l~s~s~dg~i~iwd~~~~ 214 (368)
+...++ +.+ ..++ +.|..+| .++
T Consensus 182 ~~~d~~-g~l-~v~t--~~l~~~d-~~g 204 (330)
T 3hxj_A 182 ASIGKD-GTI-YFGS--DKVYAIN-PDG 204 (330)
T ss_dssp CEECTT-CCE-EEES--SSEEEEC-TTS
T ss_pred eEEcCC-CEE-EEEe--CEEEEEC-CCC
Confidence 776655 554 4444 8899999 444
|
| >1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1 | Back alignment and structure |
|---|
Probab=96.81 E-value=0.17 Score=41.99 Aligned_cols=94 Identities=9% Similarity=0.053 Sum_probs=56.2
Q ss_pred CCcccCCCCCeeeeecccc-CCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeee--ccccceecc
Q psy4579 108 GGNVQLPNEDAQFDASNYD-TDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFT--GHTAVVEVR 184 (368)
Q Consensus 108 ~g~i~i~~~~~~~~~~~~~-h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~--~h~~~v~~~ 184 (368)
++.|..++.++........ .......++++|++..++++-...+.|.+++...... ..+. +...+
T Consensus 57 ~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~--------~~~~~~~~~~P---- 124 (267)
T 1npe_A 57 EPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQR--------RVLFDTGLVNP---- 124 (267)
T ss_dssp TTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC--------EEEECSSCSSE----
T ss_pred CCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCE--------EEEEECCCCCc----
Confidence 5667777766543332222 2246788999997535666666778999999875321 2221 11223
Q ss_pred eeeEEeCCCCCeEEEeeC--CCcEEEEECCC
Q psy4579 185 YGLSWNPSLNGYLLSASD--DHTICLWDINA 213 (368)
Q Consensus 185 ~~i~~~p~~~~~l~s~s~--dg~i~iwd~~~ 213 (368)
..+++.|+++.++++... .+.|..+++..
T Consensus 125 ~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg 155 (267)
T 1npe_A 125 RGIVTDPVRGNLYWTDWNRDNPKIETSHMDG 155 (267)
T ss_dssp EEEEEETTTTEEEEEECCSSSCEEEEEETTS
T ss_pred cEEEEeeCCCEEEEEECCCCCcEEEEEecCC
Confidence 289999973444444333 46888888764
|
| >2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=96.78 E-value=0.064 Score=48.19 Aligned_cols=170 Identities=12% Similarity=0.096 Sum_probs=89.5
Q ss_pred eeEec--CCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeee--------ccccceecceeeEEeCCCCCeEEEeeC
Q psy4579 133 GLSWN--PSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFT--------GHTAVVEVRYGLSWNPSLNGYLLSASD 202 (368)
Q Consensus 133 ~l~~s--p~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~--------~h~~~v~~~~~i~~~p~~~~~l~s~s~ 202 (368)
+..++ +++..++++|..++.|.++|+.+.....+ ..+++. +...+- .+...|+ + +++++..
T Consensus 86 ~~~~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p~---~~k~ie~~~~~~~~g~s~Ph----~~~~~pd-G-i~Vs~~g 156 (462)
T 2ece_A 86 CPNGKPNIERRFLIVPGLRSSRIYIIDTKPNPREPK---IIKVIEPEEVKKVSGYSRLH----TVHCGPD-A-IYISALG 156 (462)
T ss_dssp STTCCTTCCSCEEEEEBTTTCCEEEEECCSCTTSCE---EEEEECHHHHHHHHCEEEEE----EEEECSS-C-EEEEEEE
T ss_pred ccccCCCccCCEEEEccCCCCeEEEEECCCCCCCce---eeeeechhhcccccCCCccc----ceeECCC-e-EEEEcCC
Confidence 34556 77745667777899999999976533222 222221 112222 6677898 6 7777766
Q ss_pred C------CcEEEEECCCCCCCCccccceeeeecc--c-ccEeEEEEeeecccccCCCCccceEEEEeecCCccccccccc
Q psy4579 203 D------HTICLWDINATPKENRVIDAKTIFTGH--T-AVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASN 273 (368)
Q Consensus 203 d------g~i~iwd~~~~~~~~~~~~~~~~~~~~--~-~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 273 (368)
+ |.|.+.|..+.+ .+..+..- . ..-+.+-|+|. ...++......+.. + ...
T Consensus 157 ~~~g~~~g~v~vlD~~T~~-------v~~~~~~~~~~~~~~Yd~~~~p~---------~~~mvsS~wg~p~~---~-~~g 216 (462)
T 2ece_A 157 NEEGEGPGGILMLDHYSFE-------PLGKWEIDRGDQYLAYDFWWNLP---------NEVLVSSEWAVPNT---I-EDG 216 (462)
T ss_dssp ETTSCSCCEEEEECTTTCC-------EEEECCSBCTTCCCCCCEEEETT---------TTEEEECBCCCHHH---H-TTC
T ss_pred CcCCCCCCeEEEEECCCCe-------EEEEEccCCCCccccceEEECCC---------CCEEEEccCcCccc---c-ccc
Confidence 5 789999998863 33443311 1 11223444431 01111100000000 0 000
Q ss_pred cc------CCCCCcccccCCCCceeeeeecCcc-cceeEEEE--eCCCCcEEEEec-----CCCeEEEEECC
Q psy4579 274 YD------TDKGDFGGFGSVSGKIEIEIKINHE-GEVNRARY--MPQNPCVIATKT-----PSSDVLVFDYT 331 (368)
Q Consensus 274 ~d------~~~~~~~~~~~~~~~~~~~~~~~h~-~~i~~~~~--~p~~~~~lasgs-----~Dg~i~iwd~~ 331 (368)
++ .....+..|+..+++...++..+.. .....+.| +|++...++++- .+++|.+|...
T Consensus 217 ~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d 288 (462)
T 2ece_A 217 LKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYE 288 (462)
T ss_dssp CCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEE
T ss_pred cchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEec
Confidence 11 1234466677777766666654322 23345555 999977777766 77888776553
|
| >1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 | Back alignment and structure |
|---|
Probab=96.74 E-value=0.14 Score=43.92 Aligned_cols=167 Identities=11% Similarity=0.045 Sum_probs=84.1
Q ss_pred CCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcE
Q psy4579 127 TDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTI 206 (368)
Q Consensus 127 h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i 206 (368)
.-....+++|++.+..++.+-...+.|..+++....... .....+...-.... ++++.+..+.+.++-...+.|
T Consensus 28 ~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~---~~~~~~~~~~~~p~---glavd~~~~~ly~~d~~~~~I 101 (316)
T 1ijq_A 28 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVS---SYDTVISRDIQAPD---GLAVDWIHSNIYWTDSVLGTV 101 (316)
T ss_dssp SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC-----------CEEEECSSCSCCC---EEEEETTTTEEEEEETTTTEE
T ss_pred CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCc---ccEEEEeCCCCCcC---EEEEeecCCeEEEEECCCCEE
Confidence 345678899998763566666677899999987521000 01122221112222 888886535566666778899
Q ss_pred EEEECCCCCCCCccccceeeeecccccEeEEEEeeecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccC
Q psy4579 207 CLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGS 286 (368)
Q Consensus 207 ~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 286 (368)
.+.|+.... ....+.........++++|. ...++..... . .+.+...++
T Consensus 102 ~~~~~~g~~-------~~~~~~~~~~~P~~iavdp~---------~g~ly~~d~~---~------------~~~I~~~~~ 150 (316)
T 1ijq_A 102 SVADTKGVK-------RKTLFRENGSKPRAIVVDPV---------HGFMYWTDWG---T------------PAKIKKGGL 150 (316)
T ss_dssp EEEETTSSS-------EEEEEECTTCCEEEEEEETT---------TTEEEEEECS---S------------SCEEEEEET
T ss_pred EEEeCCCCc-------eEEEEECCCCCcceEEeCCC---------CCEEEEEccC---C------------CCeEEEEcC
Confidence 999986531 11112212223455665530 0112211110 0 000111111
Q ss_pred CCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECC
Q psy4579 287 VSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYT 331 (368)
Q Consensus 287 ~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~ 331 (368)
.|+....+....-...+.++++|++..++.+-+..+.|..+|+.
T Consensus 151 -dG~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~d 194 (316)
T 1ijq_A 151 -NGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVN 194 (316)
T ss_dssp -TSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred -CCCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecC
Confidence 11111111112234567889998776777776777888888886
|
| >2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=96.72 E-value=0.14 Score=46.01 Aligned_cols=73 Identities=19% Similarity=0.276 Sum_probs=49.7
Q ss_pred eeeEecCCCCCeeEEEeCC------CcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEee----
Q psy4579 132 YGLSWNPSLNGYLLSASDD------HTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSAS---- 201 (368)
Q Consensus 132 ~~l~~sp~~~~~lasg~~d------g~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s---- 201 (368)
..+..+|+| +++++..+ |.|.+.|..+.+ .+..+.....+....|.+.|+|+ .+.+++..
T Consensus 141 h~~~~~pdG--i~Vs~~g~~~g~~~g~v~vlD~~T~~-------v~~~~~~~~~~~~~~Yd~~~~p~-~~~mvsS~wg~p 210 (462)
T 2ece_A 141 HTVHCGPDA--IYISALGNEEGEGPGGILMLDHYSFE-------PLGKWEIDRGDQYLAYDFWWNLP-NEVLVSSEWAVP 210 (462)
T ss_dssp EEEEECSSC--EEEEEEEETTSCSCCEEEEECTTTCC-------EEEECCSBCTTCCCCCCEEEETT-TTEEEECBCCCH
T ss_pred cceeECCCe--EEEEcCCCcCCCCCCeEEEEECCCCe-------EEEEEccCCCCccccceEEECCC-CCEEEEccCcCc
Confidence 346678887 66666555 789999998764 34444422222211257889999 77888875
Q ss_pred ---------------CCCcEEEEECCCC
Q psy4579 202 ---------------DDHTICLWDINAT 214 (368)
Q Consensus 202 ---------------~dg~i~iwd~~~~ 214 (368)
.+.+|.+||+.++
T Consensus 211 ~~~~~g~~~~~~~~~~~d~V~v~D~~~~ 238 (462)
T 2ece_A 211 NTIEDGLKLEHLKDRYGNRIHFWDLRKR 238 (462)
T ss_dssp HHHTTCCCTTTHHHHSCCEEEEEETTTT
T ss_pred cccccccchhhhhhccCCEEEEEECCCC
Confidence 3789999999875
|
| >1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=96.62 E-value=0.071 Score=51.35 Aligned_cols=51 Identities=10% Similarity=0.155 Sum_probs=38.4
Q ss_pred CCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCC
Q psy4579 279 GDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
|.+..+|+.+++....... ..++....+...+ .++..|+.||.++.||.++
T Consensus 455 g~l~A~D~~tG~~~W~~~~--~~~~~~g~~~tag-glvf~gt~dg~l~a~D~~t 505 (689)
T 1yiq_A 455 GKLIAWDPVKQQAAWEVPY--VTIFNGGTLSTAG-NLVFEGSADGRVIAYAADT 505 (689)
T ss_dssp EEEEEEETTTTEEEEEEEE--SSSCCCCEEEETT-TEEEEECTTSEEEEEETTT
T ss_pred eeEEEEECCCCCeEeEccC--CCCccCccceECC-CEEEEECCCCcEEEEECCC
Confidence 5678899999998877652 3344444666666 5677889999999999976
|
| >3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ... | Back alignment and structure |
|---|
Probab=96.58 E-value=0.032 Score=49.30 Aligned_cols=67 Identities=10% Similarity=0.013 Sum_probs=45.1
Q ss_pred eEecCCCCCeeEEEeC-----CCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEee-------
Q psy4579 134 LSWNPSLNGYLLSASD-----DHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSAS------- 201 (368)
Q Consensus 134 l~~sp~~~~~lasg~~-----dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s------- 201 (368)
....|++ +.+..... ++.|.+.|..+.+ .+..+..-..+ .++++|+ +.+++.++
T Consensus 38 ~~~~pd~-~~vyV~~~~~~~~~~~V~ViD~~t~~-------v~~~I~vG~~P-----~va~spD-G~~lyVan~~~~r~~ 103 (386)
T 3sjl_D 38 EAPAPDA-RRVYVNDPAHFAAVTQQFVIDGEAGR-------VIGMIDGGFLP-----NPVVADD-GSFIAHASTVFSRIA 103 (386)
T ss_dssp CCCCCCT-TEEEEEECGGGCSSEEEEEEETTTTE-------EEEEEEECSSC-----EEEECTT-SSCEEEEEEEEEETT
T ss_pred eccCCCC-CEEEEEcCcccCCCCEEEEEECCCCe-------EEEEEECCCCC-----cEEECCC-CCEEEEEcccccccc
Confidence 4456887 54444433 6899999998864 33444322221 5899999 77666654
Q ss_pred ---CCCcEEEEECCCC
Q psy4579 202 ---DDHTICLWDINAT 214 (368)
Q Consensus 202 ---~dg~i~iwd~~~~ 214 (368)
.++.|.+||..+.
T Consensus 104 ~G~~~~~VsviD~~t~ 119 (386)
T 3sjl_D 104 RGERTDYVEVFDPVTL 119 (386)
T ss_dssp EEEEEEEEEEECTTTC
T ss_pred cCCCCCEEEEEECCCC
Confidence 4678999999886
|
| >3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=96.55 E-value=0.38 Score=42.61 Aligned_cols=97 Identities=8% Similarity=0.021 Sum_probs=55.5
Q ss_pred CCcccCCCCCeeeeecccc-CCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceeccee
Q psy4579 108 GGNVQLPNEDAQFDASNYD-TDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYG 186 (368)
Q Consensus 108 ~g~i~i~~~~~~~~~~~~~-h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 186 (368)
.+.|..++.++.....+.. .......+++.+.+..++++-...+.|.+.++..... ...+...-.... .
T Consensus 137 ~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~-------~~l~~~~l~~P~---g 206 (386)
T 3v65_B 137 LDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR-------KVLLWQSLEKPR---A 206 (386)
T ss_dssp TTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSC-------EEEECSSCSCEE---E
T ss_pred CCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCce-------EEeecCCCCCCc---E
Confidence 4566666666543322222 2234567888876536666666778888888765321 111222212232 8
Q ss_pred eEEeCCCCCeEEEeeCC-CcEEEEECCCC
Q psy4579 187 LSWNPSLNGYLLSASDD-HTICLWDINAT 214 (368)
Q Consensus 187 i~~~p~~~~~l~s~s~d-g~i~iwd~~~~ 214 (368)
|++.|.++.++++-... +.|...++...
T Consensus 207 iavdp~~g~ly~td~~~~~~I~r~~~dG~ 235 (386)
T 3v65_B 207 IALHPMEGTIYWTDWGNTPRIEASSMDGS 235 (386)
T ss_dssp EEEETTTTEEEEEECSSSCEEEEEETTSC
T ss_pred EEEEcCCCeEEEeccCCCCEEEEEeCCCC
Confidence 99998744455554444 68888887654
|
| >3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L | Back alignment and structure |
|---|
Probab=96.45 E-value=0.45 Score=42.32 Aligned_cols=98 Identities=14% Similarity=0.062 Sum_probs=54.5
Q ss_pred ccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEe
Q psy4579 111 VQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWN 190 (368)
Q Consensus 111 i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~ 190 (368)
|+..++++.....+......+..|+|++.+..++.+-...+.|+.+++....... .....+...-.... .+++.
T Consensus 94 I~~i~l~~~~~~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~---~~~~~~~~~~~~p~---glavD 167 (400)
T 3p5b_L 94 VRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVS---SYDTVISRDIQAPD---GLAVD 167 (400)
T ss_dssp EEEECTTSCSCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------C---CCEEEECSSCSCEE---EEEEE
T ss_pred eEEEccCCcceeEeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCC---cceEEEeCCCCCcc---cEEEE
Confidence 3334444332233334456788999998663556665667889889887532100 01122221222232 77887
Q ss_pred CCCCCeEEEeeCCCcEEEEECCCC
Q psy4579 191 PSLNGYLLSASDDHTICLWDINAT 214 (368)
Q Consensus 191 p~~~~~l~s~s~dg~i~iwd~~~~ 214 (368)
+..+++.++-...+.|.+.|+...
T Consensus 168 ~~~~~lY~~d~~~~~I~~~~~~g~ 191 (400)
T 3p5b_L 168 WIHSNIYWTDSVLGTVSVADTKGV 191 (400)
T ss_dssp TTTTEEEEEETTTTEEEEECTTTC
T ss_pred ecCCceEEEECCCCeEEEEeCCCC
Confidence 753666666677889999988754
|
| >1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A | Back alignment and structure |
|---|
Probab=96.39 E-value=0.06 Score=51.91 Aligned_cols=97 Identities=15% Similarity=0.046 Sum_probs=51.8
Q ss_pred ccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeee-ccccceecceeeEE
Q psy4579 111 VQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFT-GHTAVVEVRYGLSW 189 (368)
Q Consensus 111 i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~i~~ 189 (368)
|...++++.....+......+..|+|++.+..++++-...+.|+.+++.+...... ....+. +-..+. .|++
T Consensus 388 I~~id~~~~~~~~~~~~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~---~~~~i~~~~~~P~----glav 460 (699)
T 1n7d_A 388 VRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSS---YDTVISRDIQAPD----GLAV 460 (699)
T ss_dssp -CEECTTSCCEECCSCCCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CC---CCCBCCSCC--CC----CEEC
T ss_pred eEEEeCCCCcceeeeccCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcc---eEEEEeCCCCCcc----eEEE
Confidence 33334443323333333456778999987634455555678899999875110000 111111 112222 6777
Q ss_pred eCCCCCeEEEeeCCCcEEEEECCCC
Q psy4579 190 NPSLNGYLLSASDDHTICLWDINAT 214 (368)
Q Consensus 190 ~p~~~~~l~s~s~dg~i~iwd~~~~ 214 (368)
.+..+.++++-...+.|.+.++...
T Consensus 461 D~~~g~LY~tD~~~~~I~v~d~dg~ 485 (699)
T 1n7d_A 461 DWIHSNIYWTDSVLGTVSVADTKGV 485 (699)
T ss_dssp CCSSSBCEECCTTTSCEEEEBSSSC
T ss_pred EeeCCcEEEEeccCCeEEEEecCCC
Confidence 7553556666667788999988654
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=96.38 E-value=0.089 Score=51.25 Aligned_cols=120 Identities=11% Similarity=0.098 Sum_probs=64.5
Q ss_pred EEEEEEecC-CCccccccCCccc-CCCCcccCCCCCee-eeeccccCCCCceeeEecCCCCCeeEEEeCC-----CcEEE
Q psy4579 84 LLIASVQLP-NEDAQFDASNYDT-DKGGNVQLPNEDAQ-FDASNYDTDKGGYGLSWNPSLNGYLLSASDD-----HTICL 155 (368)
Q Consensus 84 ~~i~~~~~~-~~~~~~~~~~~~~-~~~g~i~i~~~~~~-~~~~~~~h~~~v~~l~~sp~~~~~lasg~~d-----g~v~i 155 (368)
..+....++ +++..+....... +....|.++++++. ..... .-......++|+|+| +.|+-...| ..|.+
T Consensus 174 ~~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~-~~~~~~~~~~WspDg-~~l~y~~~d~~~~~~~v~~ 251 (751)
T 2xe4_A 174 CDVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD-KVSGTNGEIVWGPDH-TSLFYVTKDETLRENKVWR 251 (751)
T ss_dssp CEEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC-CEEEECSCCEECSST-TEEEEEEECTTCCEEEEEE
T ss_pred EEEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc-cccCceeeEEEecCC-CEEEEEEECCCCCCCEEEE
Confidence 356666776 6554433222111 11234777787654 31110 001224578999998 666666554 25777
Q ss_pred EeCCCCCCCCcccccceeeecc-ccceecceeeEEeCCCCCeEEEeeC---CCcEEEEECCCC
Q psy4579 156 WDINATPKENRVIDAKTIFTGH-TAVVEVRYGLSWNPSLNGYLLSASD---DHTICLWDINAT 214 (368)
Q Consensus 156 wd~~~~~~~~~~~~~~~~~~~h-~~~v~~~~~i~~~p~~~~~l~s~s~---dg~i~iwd~~~~ 214 (368)
+++.++... ....+... .... ..+.|+|+ +.+|+..+. ...|.++|+.++
T Consensus 252 ~~lgt~~~~-----~~lv~~~~~~~~~---~~~~~SpD-g~~l~~~~~~~~~~~l~~~d~~~~ 305 (751)
T 2xe4_A 252 HVMGKLQSE-----DVCLYEEHNPLFS---AFMYKAAD-TNTLCIGSQSPETAEVHLLDLRKG 305 (751)
T ss_dssp EETTSCGGG-----CEEEEECCCTTCE---EEEEECTT-SSEEEEEEECSSCEEEEEEESSSC
T ss_pred EECCCCchh-----cEEEEecCCCceE---EEEEECCC-CCEEEEEecCCCCceEEEEECCCC
Confidence 787664321 11233221 2222 27899999 776665542 346888888765
|
| >3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A | Back alignment and structure |
|---|
Probab=96.29 E-value=0.049 Score=47.92 Aligned_cols=59 Identities=7% Similarity=0.075 Sum_probs=40.0
Q ss_pred CeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCC
Q psy4579 142 GYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATP 215 (368)
Q Consensus 142 ~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~ 215 (368)
..+..++.++.+..+|..+++. ..... ..... .+.. . +..++.++.++.+..+|..++.
T Consensus 240 ~~v~~~~~~g~l~~~d~~tG~~-------~w~~~--~~~~~---~~~~--~-~~~l~~~~~~g~l~~~d~~tG~ 298 (376)
T 3q7m_A 240 GVVFALAYNGNLTALDLRSGQI-------MWKRE--LGSVN---DFIV--D-GNRIYLVDQNDRVMALTIDGGV 298 (376)
T ss_dssp TEEEEECTTSCEEEEETTTCCE-------EEEEC--CCCEE---EEEE--E-TTEEEEEETTCCEEEEETTTCC
T ss_pred CEEEEEecCcEEEEEECCCCcE-------Eeecc--CCCCC---CceE--E-CCEEEEEcCCCeEEEEECCCCc
Confidence 5677788899999999987742 22222 11221 3333 2 5678888889999999998873
|
| >2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A* | Back alignment and structure |
|---|
Probab=96.21 E-value=0.39 Score=41.10 Aligned_cols=72 Identities=10% Similarity=0.111 Sum_probs=45.3
Q ss_pred CceeeEecC-CCCCeeEEEeC-----------------CCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeC
Q psy4579 130 GGYGLSWNP-SLNGYLLSASD-----------------DHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNP 191 (368)
Q Consensus 130 ~v~~l~~sp-~~~~~lasg~~-----------------dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p 191 (368)
....+++.+ +| ++.++-.. +|.|..+|..++. ...+...-... ..|+|+|
T Consensus 127 ~p~~i~~d~~~G-~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~--------~~~~~~~~~~p---~gia~~~ 194 (322)
T 2fp8_A 127 WLYAVTVDQRTG-IVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKE--------TTLLLKELHVP---GGAEVSA 194 (322)
T ss_dssp CEEEEEECTTTC-CEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTE--------EEEEEEEESCC---CEEEECT
T ss_pred ccceEEEecCCC-EEEEECCcccccccccceehcccCCCceEEEEeCCCCE--------EEEeccCCccC---cceEECC
Confidence 467899999 88 66666432 3667788876542 11111111122 3899999
Q ss_pred CCCCeE-EEeeCCCcEEEEECCCC
Q psy4579 192 SLNGYL-LSASDDHTICLWDINAT 214 (368)
Q Consensus 192 ~~~~~l-~s~s~dg~i~iwd~~~~ 214 (368)
+ ++.| ++-+..+.|..+|+...
T Consensus 195 d-g~~lyv~d~~~~~I~~~~~~~~ 217 (322)
T 2fp8_A 195 D-SSFVLVAEFLSHQIVKYWLEGP 217 (322)
T ss_dssp T-SSEEEEEEGGGTEEEEEESSST
T ss_pred C-CCEEEEEeCCCCeEEEEECCCC
Confidence 8 6644 45466789999998753
|
| >3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.03 E-value=1.1 Score=43.65 Aligned_cols=168 Identities=11% Similarity=0.049 Sum_probs=86.1
Q ss_pred CCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcE
Q psy4579 127 TDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTI 206 (368)
Q Consensus 127 h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i 206 (368)
....+.+|+|++....++++-...+.|+.+++....... .....+...-.... .|++.+..+++.++-...+.|
T Consensus 422 ~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~---~~~~vi~~~l~~P~---GLAvD~~~~~LY~tD~~~~~I 495 (791)
T 3m0c_C 422 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVS---SYDTVISRDIQAPD---GLAVDWIHSNIYWTDSVLGTV 495 (791)
T ss_dssp SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC-----------CEEEECSSCSCCC---EEEEETTTTEEEEEETTTTEE
T ss_pred CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCc---ceeEEEecCCCCcc---eeeeeecCCcEEEEecCCCeE
Confidence 345677899998653566666677888888887531100 01122221222222 788877635666666778899
Q ss_pred EEEECCCCCCCCccccceeeeecccccEeEEEEeeecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccC
Q psy4579 207 CLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGS 286 (368)
Q Consensus 207 ~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 286 (368)
.+.++..... ...+...-.....|++++. ...++..... .. +.+...++
T Consensus 496 ~v~~ldG~~~-------~~l~~~~l~~P~gIaVDp~---------~g~LYwtD~g---~~------------~~I~~~~~ 544 (791)
T 3m0c_C 496 SVADTKGVKR-------KTLFRENGSKPRAIVVDPV---------HGFMYWTDWG---TP------------AKIKKGGL 544 (791)
T ss_dssp EEEETTSSSE-------EEEEECTTCCEEEEEEETT---------TTEEEEEECS---SS------------CEEEEEET
T ss_pred EEEeCCCCeE-------EEEEeCCCCCcceEEEecC---------CCCEEEecCC---CC------------CeEEEEec
Confidence 9999875421 1112222233556676641 0112211100 00 00111111
Q ss_pred CCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCC
Q psy4579 287 VSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 287 ~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
.|.....+........+.|++.|.+..|+.+=.....|...++..
T Consensus 545 -dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG 589 (791)
T 3m0c_C 545 -NGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 589 (791)
T ss_dssp -TSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred -CCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCC
Confidence 122222222123356788999987767776766677888888863
|
| >3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli} | Back alignment and structure |
|---|
Probab=95.99 E-value=0.54 Score=38.86 Aligned_cols=174 Identities=11% Similarity=0.143 Sum_probs=95.1
Q ss_pred cccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceee--eccccceecceeeEEeCCCCCeEEEee
Q psy4579 124 NYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIF--TGHTAVVEVRYGLSWNPSLNGYLLSAS 201 (368)
Q Consensus 124 ~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~--~~h~~~v~~~~~i~~~p~~~~~l~s~s 201 (368)
+-+-.+.+..++|+|++..++++...++.|...|.. ++ ..+.+ .+.. ... .|++.++ +.++++.-
T Consensus 22 l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~-------v~~~i~l~g~~-D~E---GIa~~~~-g~~~vs~E 88 (255)
T 3qqz_A 22 IAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GD-------LIRTIPLDFVK-DLE---TIEYIGD-NQFVISDE 88 (255)
T ss_dssp CTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CC-------EEEEEECSSCS-SEE---EEEECST-TEEEEEET
T ss_pred CCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CC-------EEEEEecCCCC-ChH---HeEEeCC-CEEEEEEC
Confidence 344556799999999873566667778888888887 32 23333 3322 333 8888876 66666665
Q ss_pred CCCcEEEEECCCCCCCCcccccee-ee--ecccccEeEEEEeeecccccCCCCccceEEEEeecCCcccccccccccCCC
Q psy4579 202 DDHTICLWDINATPKENRVIDAKT-IF--TGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDK 278 (368)
Q Consensus 202 ~dg~i~iwd~~~~~~~~~~~~~~~-~~--~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 278 (368)
.++.+.++++....... ...... .+ .........++|++ ...++|+..-.-+ ..+..++
T Consensus 89 ~~~~l~~~~v~~~~~i~-~~~~~~~~~~~~~~N~g~EGLA~d~---------~~~~L~va~E~~p-----~~i~~~~--- 150 (255)
T 3qqz_A 89 RDYAIYVISLTPNSEVK-ILKKIKIPLQESPTNCGFEGLAYSR---------QDHTFWFFKEKNP-----IEVYKVN--- 150 (255)
T ss_dssp TTTEEEEEEECTTCCEE-EEEEEECCCSSCCCSSCCEEEEEET---------TTTEEEEEEESSS-----EEEEEEE---
T ss_pred CCCcEEEEEcCCCCeee-eeeeeccccccccccCCcceEEEeC---------CCCEEEEEECcCC-----ceEEEEc---
Confidence 67889999886653210 000000 00 11234457788875 1234444331110 0111111
Q ss_pred CCcccccCCCCceeee--e-ecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECC
Q psy4579 279 GDFGGFGSVSGKIEIE--I-KINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYT 331 (368)
Q Consensus 279 ~~~~~~~~~~~~~~~~--~-~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~ 331 (368)
|.... ..-..... + ...+...+.+++++|....+++.......+..+|..
T Consensus 151 g~~~~---~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~ 203 (255)
T 3qqz_A 151 GLLSS---NELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLV 203 (255)
T ss_dssp STTCS---SCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTT
T ss_pred ccccC---CceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCC
Confidence 00000 00000000 0 012344679999999877888888888899999976
|
| >2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A* | Back alignment and structure |
|---|
Probab=95.68 E-value=0.39 Score=41.09 Aligned_cols=171 Identities=8% Similarity=0.072 Sum_probs=86.7
Q ss_pred CceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeec--------------------cccceecceeeEE
Q psy4579 130 GGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTG--------------------HTAVVEVRYGLSW 189 (368)
Q Consensus 130 ~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~--------------------h~~~v~~~~~i~~ 189 (368)
...+++|++++ +++.++..++.|..||..++. ...+.. ....+ .++++
T Consensus 20 ~p~~i~~d~~g-~~l~v~~~~~~i~~~~~~~~~--------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p---~gi~~ 87 (322)
T 2fp8_A 20 APNSFTFDSTN-KGFYTSVQDGRVIKYEGPNSG--------FVDFAYASPYWNKAFCENSTDAEKRPLCGRT---YDISY 87 (322)
T ss_dssp CCCCEECCTTC-SSEEEECTTSEEEEECCTTTC--------EEEEEESCTTCCHHHHTTCCCGGGHHHHCCE---EEEEE
T ss_pred CceEEEEcCCC-CEEEEEcCCCeEEEECCCCCc--------eEEEecccccccccccccccchhccccCCCC---ceEEE
Confidence 45678899988 778888889999999877542 111210 01123 38999
Q ss_pred eCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecc-----cccEeEEEEeeecccccCCCCccceEEEEeecCC
Q psy4579 190 NPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGH-----TAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPN 264 (368)
Q Consensus 190 ~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~-----~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~ 264 (368)
.++++. |+.+...+.|..+|..++. +..+... ....+.+++.+ . ...+|+.......
T Consensus 88 ~~~~g~-l~v~d~~~~i~~~d~~~g~--------~~~~~~~~~~~~~~~p~~i~~d~-------~--~G~l~v~d~~~~~ 149 (322)
T 2fp8_A 88 NLQNNQ-LYIVDCYYHLSVVGSEGGH--------ATQLATSVDGVPFKWLYAVTVDQ-------R--TGIVYFTDVSTLY 149 (322)
T ss_dssp ETTTTE-EEEEETTTEEEEECTTCEE--------CEEEESEETTEECSCEEEEEECT-------T--TCCEEEEESCSSC
T ss_pred cCCCCc-EEEEECCCCEEEEeCCCCE--------EEEecccCCCCcccccceEEEec-------C--CCEEEEECCcccc
Confidence 874244 4555445558888876431 1111110 01223333321 0 1245655432100
Q ss_pred cccccccc-cccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCC
Q psy4579 265 EDAQFDAS-NYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 265 ~~~~~~~~-~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
........ .-....+.+..++..+++..... ......+.++++|++..++++-+..+.|.++++..
T Consensus 150 ~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~--~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~ 216 (322)
T 2fp8_A 150 DDRGVQQIMDTSDKTGRLIKYDPSTKETTLLL--KELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEG 216 (322)
T ss_dssp CTTCHHHHHHHTCCCEEEEEEETTTTEEEEEE--EEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSS
T ss_pred cccccceehcccCCCceEEEEeCCCCEEEEec--cCCccCcceEECCCCCEEEEEeCCCCeEEEEECCC
Confidence 00000000 00011223344444444332211 11234577999999865776767778999999874
|
| >3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=95.55 E-value=0.5 Score=42.53 Aligned_cols=32 Identities=16% Similarity=0.145 Sum_probs=25.8
Q ss_pred cceeEEEEeCCCCcEEEEecCCCeEEEEECCC
Q psy4579 301 GEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 301 ~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
..-+.++|+|++..++++-...+.|..++...
T Consensus 270 ~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 270 GWEFHIQFHPSGNYAYIVVVNQHYILRSDYDW 301 (430)
T ss_dssp SCCEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred CcceeEEEcCCCCEEEEEECCCCEEEEEeCCc
Confidence 34678999999965777877889999988763
|
| >3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A | Back alignment and structure |
|---|
Probab=95.43 E-value=1.2 Score=38.82 Aligned_cols=62 Identities=10% Similarity=0.042 Sum_probs=38.8
Q ss_pred CeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccc--cc--------eecceeeEEeCCCCCeEEEeeCCCcEEEEEC
Q psy4579 142 GYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHT--AV--------VEVRYGLSWNPSLNGYLLSASDDHTICLWDI 211 (368)
Q Consensus 142 ~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~--~~--------v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~ 211 (368)
..++.+..+|.+..+|..+++. ........ .. +. ..... . +..++.++.++.+..+|.
T Consensus 189 ~~v~~g~~~g~l~~~d~~tG~~-------~w~~~~~~~~~~~~~~~~~~~~--~~p~~--~-~~~v~~~~~~g~l~~~d~ 256 (376)
T 3q7m_A 189 GAAVVGGDNGRVSAVLMEQGQM-------IWQQRISQATGSTEIDRLSDVD--TTPVV--V-NGVVFALAYNGNLTALDL 256 (376)
T ss_dssp TEEEECCTTTEEEEEETTTCCE-------EEEEECCC-----------CCC--CCCEE--E-TTEEEEECTTSCEEEEET
T ss_pred CEEEEEcCCCEEEEEECCCCcE-------EEEEecccCCCCcccccccccC--CCcEE--E-CCEEEEEecCcEEEEEEC
Confidence 4677788899999999987742 22222110 00 10 01111 2 567788888999999999
Q ss_pred CCCC
Q psy4579 212 NATP 215 (368)
Q Consensus 212 ~~~~ 215 (368)
+++.
T Consensus 257 ~tG~ 260 (376)
T 3q7m_A 257 RSGQ 260 (376)
T ss_dssp TTCC
T ss_pred CCCc
Confidence 8873
|
| >3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
Probab=95.42 E-value=0.14 Score=45.93 Aligned_cols=52 Identities=10% Similarity=-0.026 Sum_probs=36.3
Q ss_pred CcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEee----------CCCcEEEEECCCCC
Q psy4579 151 HTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSAS----------DDHTICLWDINATP 215 (368)
Q Consensus 151 g~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s----------~dg~i~iwd~~~~~ 215 (368)
+.|.++|..+.+ .+..+..-..+ .+.++|+ +++++.+. .++.|.++|..+..
T Consensus 99 ~~VsVID~~t~~-------vv~~I~vG~~P-----gia~SpD-gk~lyVan~~~~~~~~G~~~~~VsviD~~t~~ 160 (426)
T 3c75_H 99 TQQFVIDGSTGR-------ILGMTDGGFLP-----HPVAAED-GSFFAQASTVFERIARGKRTDYVEVFDPVTFL 160 (426)
T ss_dssp EEEEEEETTTTE-------EEEEEEECSSC-----EEEECTT-SSCEEEEEEEEEETTEEEEEEEEEEECTTTCC
T ss_pred CeEEEEECCCCE-------EEEEEECCCCC-----ceEECCC-CCEEEEEeccccccccCCCCCEEEEEECCCCc
Confidence 799999998864 33334322221 6889999 66666654 47799999998863
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=95.33 E-value=0.35 Score=47.09 Aligned_cols=71 Identities=13% Similarity=0.136 Sum_probs=45.3
Q ss_pred CceeeEec-CCCCCeeEEE-eCCC----cEEEEeCCCC-CCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeC
Q psy4579 130 GGYGLSWN-PSLNGYLLSA-SDDH----TICLWDINAT-PKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASD 202 (368)
Q Consensus 130 ~v~~l~~s-p~~~~~lasg-~~dg----~v~iwd~~~~-~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~ 202 (368)
.+...+|| |+| ++||-+ ..+| .|+++|+.++ ... ...+.. .. .++.|+|+ ++.|+....
T Consensus 175 ~~~~~~~S~PDG-~~lAy~~~~~G~~~~~l~v~dl~~g~~~l------~~~~~~---~~---~~~~WspD-g~~l~y~~~ 240 (751)
T 2xe4_A 175 DVMEVKPAPPEH-DLVAFSVDMSGNEVYTIEFKRISDPSQTI------ADKVSG---TN---GEIVWGPD-HTSLFYVTK 240 (751)
T ss_dssp EEEEEEECTTTT-CEEEEEEESSSSSCEEEEEEETTCTTCCC------CCCEEE---EC---SCCEECSS-TTEEEEEEE
T ss_pred EEeeeEecCCCC-CEEEEEEeCCCCceEEEEEEECCCCCEeC------CccccC---ce---eeEEEecC-CCEEEEEEE
Confidence 57788999 999 766643 3333 4999999886 411 111111 12 28899999 666665555
Q ss_pred C-----CcEEEEECCCC
Q psy4579 203 D-----HTICLWDINAT 214 (368)
Q Consensus 203 d-----g~i~iwd~~~~ 214 (368)
| ..|.++++.++
T Consensus 241 d~~~~~~~v~~~~lgt~ 257 (751)
T 2xe4_A 241 DETLRENKVWRHVMGKL 257 (751)
T ss_dssp CTTCCEEEEEEEETTSC
T ss_pred CCCCCCCEEEEEECCCC
Confidence 4 25777888665
|
| >1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1 | Back alignment and structure |
|---|
Probab=95.11 E-value=0.11 Score=45.70 Aligned_cols=69 Identities=3% Similarity=-0.076 Sum_probs=48.1
Q ss_pred eEecCCCCCeeEEE-e---C-----CCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEee-CC
Q psy4579 134 LSWNPSLNGYLLSA-S---D-----DHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSAS-DD 203 (368)
Q Consensus 134 l~~sp~~~~~lasg-~---~-----dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s-~d 203 (368)
+.++|++ +.+..+ . . ++.+.++|+.+.+ .+..+.....+ .+++|+|++..++++.. .+
T Consensus 269 v~~s~dg-~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~-------vv~~i~vg~~p----~gi~~s~Dg~~l~va~~~~~ 336 (368)
T 1mda_H 269 VAKLKNT-DGIMILTVEHSRSCLAAAENTSSVTASVGQ-------TSGPISNGHDS----DAIIAAQDGASDNYANSAGT 336 (368)
T ss_dssp EEEETTT-TEEEEEEEECSSCTTSCEEEEEEEESSSCC-------EEECCEEEEEE----CEEEECCSSSCEEEEEETTT
T ss_pred eEEcCCC-CEEEEEeccccCcccccCCCEEEEECCCCe-------EEEEEECCCCc----ceEEECCCCCEEEEEccCCC
Confidence 7899998 555543 3 2 2356699998875 33444433333 39999999444677777 59
Q ss_pred CcEEEEECCCC
Q psy4579 204 HTICLWDINAT 214 (368)
Q Consensus 204 g~i~iwd~~~~ 214 (368)
+.|.++|+.+.
T Consensus 337 ~~VsVID~~t~ 347 (368)
T 1mda_H 337 EVLDIYDAASD 347 (368)
T ss_dssp TEEEEEESSSC
T ss_pred CeEEEEECCCC
Confidence 99999999987
|
| >3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A | Back alignment and structure |
|---|
Probab=94.93 E-value=1.7 Score=37.68 Aligned_cols=100 Identities=12% Similarity=0.169 Sum_probs=57.4
Q ss_pred CCCCcccCCCCCeeeeeccccCCCCceeeEecCCC---CC---e-eEEEeC--CCcEEEEeCCCCCCCCcccccceeeec
Q psy4579 106 DKGGNVQLPNEDAQFDASNYDTDKGGYGLSWNPSL---NG---Y-LLSASD--DHTICLWDINATPKENRVIDAKTIFTG 176 (368)
Q Consensus 106 ~~~g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~---~~---~-lasg~~--dg~v~iwd~~~~~~~~~~~~~~~~~~~ 176 (368)
.+.+-+.+++++++.+..+.. +.++.+..-|.- .. + +++.-. +.+|++|++..... .+..+..
T Consensus 47 ~k~~gL~Vydl~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~------~l~~i~~ 118 (355)
T 3amr_A 47 NKKSGLVVYSLDGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNG------TLQSMTD 118 (355)
T ss_dssp ETTTEEEEEETTSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTC------CEEECSC
T ss_pred cCCCCEEEEcCCCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCC------ceeeccc
Confidence 356778899998877766532 556666666521 01 2 333334 58899997742211 1222211
Q ss_pred c----ccceecceeeEE--eCCCCC-eEEEeeCCCcEEEEECCC
Q psy4579 177 H----TAVVEVRYGLSW--NPSLNG-YLLSASDDHTICLWDINA 213 (368)
Q Consensus 177 h----~~~v~~~~~i~~--~p~~~~-~l~s~s~dg~i~iwd~~~ 213 (368)
- ...+..++.+++ +|..+. +++....+|.+..|++..
T Consensus 119 ~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~ 162 (355)
T 3amr_A 119 PDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKA 162 (355)
T ss_dssp TTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEE
T ss_pred cccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEe
Confidence 0 001112257777 675343 677888899999999843
|
| >3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=94.90 E-value=1.7 Score=37.69 Aligned_cols=97 Identities=8% Similarity=0.021 Sum_probs=56.3
Q ss_pred CCcccCCCCCeeeeecccc-CCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceeccee
Q psy4579 108 GGNVQLPNEDAQFDASNYD-TDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYG 186 (368)
Q Consensus 108 ~g~i~i~~~~~~~~~~~~~-h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 186 (368)
.+.|..++.++........ .......+++.+.+..++++-...+.|.+.++..... ...+...-.... .
T Consensus 94 ~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~-------~~l~~~~l~~P~---~ 163 (349)
T 3v64_C 94 LDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR-------KVLLWQSLEKPR---A 163 (349)
T ss_dssp TTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC-------EEEECTTCSCEE---E
T ss_pred CCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCce-------EEEEeCCCCCcc---e
Confidence 4556666655433222221 2234577888876536667777778999999875421 111222212232 8
Q ss_pred eEEeCCCCCeEEEeeCC-CcEEEEECCCC
Q psy4579 187 LSWNPSLNGYLLSASDD-HTICLWDINAT 214 (368)
Q Consensus 187 i~~~p~~~~~l~s~s~d-g~i~iwd~~~~ 214 (368)
+++.|.++.++.+-... +.|...++...
T Consensus 164 iavdp~~g~ly~td~~~~~~I~r~~~dG~ 192 (349)
T 3v64_C 164 IALHPMEGTIYWTDWGNTPRIEASSMDGS 192 (349)
T ss_dssp EEEETTTTEEEEEECSSSCEEEEEETTSC
T ss_pred EEEecCcCeEEEeccCCCCEEEEEeCCCC
Confidence 99999745555555455 78888888653
|
| >1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A | Back alignment and structure |
|---|
Probab=94.53 E-value=0.19 Score=46.81 Aligned_cols=30 Identities=7% Similarity=0.037 Sum_probs=25.9
Q ss_pred ceeEEEEeCCCCcEEEEecCCCeEEEEECCC
Q psy4579 302 EVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 302 ~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
....++|+|+| ++.++.-.|+.|.+||+..
T Consensus 332 gP~h~aF~~dG-~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 332 GPLHTAFDGRG-NAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp CEEEEEECTTS-EEEEEETTTTEEEEEEHHH
T ss_pred CcceEEECCCC-eEEEEEecCCcEEEEEhhH
Confidence 35678999999 8888888999999999865
|
| >1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=94.52 E-value=0.5 Score=45.32 Aligned_cols=56 Identities=13% Similarity=0.140 Sum_probs=39.2
Q ss_pred CCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecC----------------CCeEEEEECCC
Q psy4579 277 DKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTP----------------SSDVLVFDYTK 332 (368)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~----------------Dg~i~iwd~~~ 332 (368)
..+.+..+|..+++++..+..++.....-+.|.++|..+++..+. .+.+..|.+..
T Consensus 496 ~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~G~~~v~~~~G~~~~~~~~~~~~~~~~~~~l~~f~l~~ 567 (677)
T 1kb0_A 496 ADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQYVSVAVGWGGVYGLAARATERQGPGTVYTFVVGG 567 (677)
T ss_dssp TTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEECCCHHHHHHCCSCSCCCCCEEEEEEETC
T ss_pred CCCcEEEEECCCCceeeeeeCCCCcccCCEEEEeCCEEEEEEeccCCccccccccccccCCCCeEEEEeccc
Confidence 345677788888998888876655455667788888666655333 47888888863
|
| >3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli} | Back alignment and structure |
|---|
Probab=94.22 E-value=2 Score=35.44 Aligned_cols=118 Identities=11% Similarity=0.156 Sum_probs=64.3
Q ss_pred EEEEecCCCccccccCCcccCCCCcccCCCCCeeeeecc-ccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCC
Q psy4579 86 IASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQFDASN-YDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKE 164 (368)
Q Consensus 86 i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~-~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~ 164 (368)
++.+.+.+.+..+.+.. +.++.|...+.+++..... ..-....-.|++.+++ .++++.-.++.+.++++......
T Consensus 29 lSGla~~~~~~~L~aV~---d~~~~I~~ld~~g~v~~~i~l~g~~D~EGIa~~~~g-~~~vs~E~~~~l~~~~v~~~~~i 104 (255)
T 3qqz_A 29 ISSLTWSAQSNTLFSTI---NKPAAIVEMTTNGDLIRTIPLDFVKDLETIEYIGDN-QFVISDERDYAIYVISLTPNSEV 104 (255)
T ss_dssp EEEEEEETTTTEEEEEE---ETTEEEEEEETTCCEEEEEECSSCSSEEEEEECSTT-EEEEEETTTTEEEEEEECTTCCE
T ss_pred cceeEEeCCCCEEEEEE---CCCCeEEEEeCCCCEEEEEecCCCCChHHeEEeCCC-EEEEEECCCCcEEEEEcCCCCee
Confidence 55566643333333322 2356676667665544443 1222457778888887 66666556788889888654320
Q ss_pred Ccccccce-ee--eccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECC
Q psy4579 165 NRVIDAKT-IF--TGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDIN 212 (368)
Q Consensus 165 ~~~~~~~~-~~--~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~ 212 (368)
.. ..... .+ ........ +|+|.|. ++.|.++.......||.+.
T Consensus 105 ~~-~~~~~~~~~~~~~N~g~E---GLA~d~~-~~~L~va~E~~p~~i~~~~ 150 (255)
T 3qqz_A 105 KI-LKKIKIPLQESPTNCGFE---GLAYSRQ-DHTFWFFKEKNPIEVYKVN 150 (255)
T ss_dssp EE-EEEEECCCSSCCCSSCCE---EEEEETT-TTEEEEEEESSSEEEEEEE
T ss_pred ee-eeeeccccccccccCCcc---eEEEeCC-CCEEEEEECcCCceEEEEc
Confidence 00 00000 01 11223345 9999998 6666666665555566554
|
| >3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A* | Back alignment and structure |
|---|
Probab=93.96 E-value=4.3 Score=38.37 Aligned_cols=183 Identities=9% Similarity=0.020 Sum_probs=89.6
Q ss_pred CcccCCCCCeee--eeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceeccee
Q psy4579 109 GNVQLPNEDAQF--DASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYG 186 (368)
Q Consensus 109 g~i~i~~~~~~~--~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 186 (368)
..|+..++++.. .......-+....|+|++.+..++.+-...+.|..++++.... ....+...-.... .
T Consensus 18 ~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~------~~~v~~~~~~~P~---G 88 (619)
T 3s94_A 18 RDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTES------VQNVVVSGLLSPD---G 88 (619)
T ss_dssp SBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----------CEEEECSSCSCEE---E
T ss_pred ccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCc------eEEEEeCCCCCcC---e
Confidence 445555555421 1122233445778999987635555555678888888875421 0122222112232 8
Q ss_pred eEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeeecccccCCCCccceEEEEeecCCcc
Q psy4579 187 LSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNED 266 (368)
Q Consensus 187 i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 266 (368)
+++.+..+++.++-...+.|.+.++..... ...+...-..-..++++|. ...++..... ..
T Consensus 89 lAvD~~~~~ly~~d~~~~~I~v~~~dG~~~-------~~l~~~~l~~P~~Iavdp~---------~g~ly~tD~g---~~ 149 (619)
T 3s94_A 89 LACDWLGEKLYWTDSETNRIEVSNLDGSLR-------KVLFWQELDQPRAIALDPS---------SGFMYWTDWG---EV 149 (619)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSCSC-------EEEECSSCSCCCCEEEETT---------TTEEEEEECS---SS
T ss_pred EEEEecCCEEEEEeCCCCEEEEEECCCCCE-------EEEEeCCCCCCceEEEecC---------CCeEEEeccC---CC
Confidence 888876355666667788999999876421 1111122223345555531 0122222110 00
Q ss_pred cccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCC
Q psy4579 267 AQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 267 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
..+.....| |.....+....-...+.++++|++..++.+=+..+.|...|+..
T Consensus 150 ~~I~r~~~d-------------G~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG 202 (619)
T 3s94_A 150 PKIERAGMD-------------GSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDG 202 (619)
T ss_dssp CEEEEEETT-------------SCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSC
T ss_pred CEEEEEECC-------------CCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCC
Confidence 000000011 11111111122345688999997767777767778888888863
|
| >1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=93.86 E-value=2.1 Score=40.93 Aligned_cols=51 Identities=12% Similarity=0.160 Sum_probs=36.0
Q ss_pred CCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCC
Q psy4579 279 GDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
|.+..+|..+++....... ..+.....+...+ .++..|+.||.++.||.+.
T Consensus 438 g~l~A~D~~tG~~~W~~~~--~~~~~~~~~~t~g-g~vf~g~~dg~l~a~d~~t 488 (668)
T 1kv9_A 438 GALLAWDPVKQKAAWKVPY--PTHWNGGTLSTAG-NLVFQGTAAGQMHAYSADK 488 (668)
T ss_dssp EEEEEEETTTTEEEEEEEE--SSSCCCCEEEETT-TEEEEECTTSEEEEEETTT
T ss_pred ceEEEEeCCCCcEEEEccC--CCCCcCceeEeCC-CEEEEECCcccchhhhhhc
Confidence 5577788889988776653 2333334455556 4666789999999999975
|
| >4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A* | Back alignment and structure |
|---|
Probab=93.86 E-value=4.7 Score=39.29 Aligned_cols=153 Identities=5% Similarity=0.015 Sum_probs=81.6
Q ss_pred CCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeee--------ccccceecceeeEEeCCCCCeEEE
Q psy4579 128 DKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFT--------GHTAVVEVRYGLSWNPSLNGYLLS 199 (368)
Q Consensus 128 ~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~--------~h~~~v~~~~~i~~~p~~~~~l~s 199 (368)
...|.++...++| .+ ..|..+| |.+||..+.. ...+. -....| .++...++ + .|-.
T Consensus 262 ~~~i~~i~~d~~g-~l-Wigt~~G-l~~~~~~~~~--------~~~~~~~~~~~~~l~~~~i---~~i~~D~~-g-~lWi 325 (795)
T 4a2l_A 262 SNYIRSLAMDSQN-RL-WIGTFND-LNIYHEGTDS--------FASYSSNPVENGSLSQRSV---RSIFMDSQ-G-GMWL 325 (795)
T ss_dssp CSBEEEEEECTTS-CE-EEEESSC-EEEEETTTTE--------EEEECCCTTSTTSCSSSCE---EEEEECTT-S-CEEE
T ss_pred CCeEEEEEEcCCC-CE-EEEeCCh-hheEcCCCCe--------EEEEecCCCCCCCCCCCcE---EEEEEeCC-c-CEEE
Confidence 3569999999887 44 4444454 7788876542 11111 112345 37777665 4 4566
Q ss_pred eeCCCcEEEEECCCCCCCCccccceeeeec-------ccccEeEEEEeeecccccCCCCccceEEEEeecCCcccccccc
Q psy4579 200 ASDDHTICLWDINATPKENRVIDAKTIFTG-------HTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDAS 272 (368)
Q Consensus 200 ~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~-------~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 272 (368)
|+.++-|..|+..+.. ...+.. ....|.++... ....+|+.+.
T Consensus 326 gt~~~Gl~~~~~~~~~--------~~~~~~~~~~~~l~~~~V~~i~~d----------~~g~lWiGt~------------ 375 (795)
T 4a2l_A 326 GTYFGGLNYYHPIRNR--------FKNIRNIPYKNSLSDNVVSCIVED----------KDKNLWIGTN------------ 375 (795)
T ss_dssp EESSSCEEEECGGGGS--------SEEECCCTTSSSCSCSSEEEEEEC----------TTSCEEEEES------------
T ss_pred EECCCCeEEeCCCccc--------ceEEcCCCCCCCCCCCeeEEEEEC----------CCCCEEEEEC------------
Confidence 7777888899865532 111110 12335555443 2345666541
Q ss_pred cccCCCCCcccccCCCCceeeeeec-------CcccceeEEEEeCCCCcEEEEecCCCeEEEEECCC
Q psy4579 273 NYDTDKGDFGGFGSVSGKIEIEIKI-------NHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 273 ~~d~~~~~~~~~~~~~~~~~~~~~~-------~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
.+.+..++..++........ .....|.++...+++ .+|-.|+.++-+.++|...
T Consensus 376 -----~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g-~~lWigt~~~Gl~~~d~~~ 436 (795)
T 4a2l_A 376 -----DGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKK-SLVYIGTHAGGLSILHRNS 436 (795)
T ss_dssp -----SSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTT-TEEEEEETTTEEEEEETTT
T ss_pred -----CCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCC-CEEEEEeCcCceeEEeCCC
Confidence 11122222222222111100 123568899988888 5233566777899999764
|
| >4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=93.74 E-value=2.6 Score=37.87 Aligned_cols=28 Identities=11% Similarity=0.115 Sum_probs=23.3
Q ss_pred eEEEEeCCCCcEEEEecCCCeEEEEECC
Q psy4579 304 NRARYMPQNPCVIATKTPSSDVLVFDYT 331 (368)
Q Consensus 304 ~~~~~~p~~~~~lasgs~Dg~i~iwd~~ 331 (368)
..++|+|++..++++-...+.|+.+++.
T Consensus 276 ~~ia~dpdG~~LYvad~~~~~I~~~~~d 303 (433)
T 4hw6_A 276 FHIVWHPTGDWAYIIYNGKHCIYRVDYN 303 (433)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEEBC
T ss_pred ccEEEeCCCCEEEEEeCCCCEEEEEeCC
Confidence 4699999996577777788999998875
|
| >3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=93.62 E-value=5.7 Score=38.71 Aligned_cols=75 Identities=12% Similarity=0.092 Sum_probs=47.2
Q ss_pred CCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeee-ccccceecceeeEEeCCCCCeEEEee-C-CC
Q psy4579 128 DKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFT-GHTAVVEVRYGLSWNPSLNGYLLSAS-D-DH 204 (368)
Q Consensus 128 ~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~i~~~p~~~~~l~s~s-~-dg 204 (368)
-.....|++.+.+.+++++-...+.|.+.++.... ...+. ..-... ..|++.|. ...|+... . .+
T Consensus 470 l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~--------~~~l~~~~l~~P---~gIaVDp~-~g~LYwtD~g~~~ 537 (791)
T 3m0c_C 470 IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK--------RKTLFRENGSKP---RAIVVDPV-HGFMYWTDWGTPA 537 (791)
T ss_dssp CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSS--------EEEEEECTTCCE---EEEEEETT-TTEEEEEECSSSC
T ss_pred CCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCe--------EEEEEeCCCCCc---ceEEEecC-CCCEEEecCCCCC
Confidence 34567788888764666677778899999987542 12222 122223 28999997 44444443 2 36
Q ss_pred cEEEEECCCC
Q psy4579 205 TICLWDINAT 214 (368)
Q Consensus 205 ~i~iwd~~~~ 214 (368)
.|...++...
T Consensus 538 ~I~~~~~dG~ 547 (791)
T 3m0c_C 538 KIKKGGLNGV 547 (791)
T ss_dssp EEEEEETTSC
T ss_pred eEEEEecCCC
Confidence 7888888654
|
| >1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A | Back alignment and structure |
|---|
Probab=93.46 E-value=0.76 Score=44.25 Aligned_cols=73 Identities=11% Similarity=0.003 Sum_probs=42.2
Q ss_pred CceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeee-ccccceecceeeEEeCCCCCeEEEeeCC-CcEE
Q psy4579 130 GGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFT-GHTAVVEVRYGLSWNPSLNGYLLSASDD-HTIC 207 (368)
Q Consensus 130 ~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~i~~~p~~~~~l~s~s~d-g~i~ 207 (368)
....|++.+.+.+++++-...+.|.+.++.... ...+. ..-... ..|++.|..+.++++-... +.|.
T Consensus 454 ~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~--------~~~l~~~~~~~P---~giavDp~~g~ly~td~~~~~~I~ 522 (699)
T 1n7d_A 454 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK--------RKTLFREQGSKP---RAIVVDPVHGFMYWTDWGTPAKIK 522 (699)
T ss_dssp -CCCEECCCSSSBCEECCTTTSCEEEEBSSSCC--------EEEECCCSSCCC---CCEECCSSSSCCEECCCSSSCCEE
T ss_pred CcceEEEEeeCCcEEEEeccCCeEEEEecCCCc--------eEEEEeCCCCCc---ceEEEccCCCcEEEcccCCCCeEE
Confidence 345688886553566665667889999987542 12221 111222 2889988744444443333 6777
Q ss_pred EEECCC
Q psy4579 208 LWDINA 213 (368)
Q Consensus 208 iwd~~~ 213 (368)
..++..
T Consensus 523 ~~~~dG 528 (699)
T 1n7d_A 523 KGGLNG 528 (699)
T ss_dssp BCCSSS
T ss_pred EEeCCC
Confidence 777654
|
| >2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3 | Back alignment and structure |
|---|
Probab=93.29 E-value=3.3 Score=34.92 Aligned_cols=94 Identities=13% Similarity=0.124 Sum_probs=51.0
Q ss_pred CCcccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCC-C-cEEEEeCCCCCCCCcccccceeeeccccceecce
Q psy4579 108 GGNVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDD-H-TICLWDINATPKENRVIDAKTIFTGHTAVVEVRY 185 (368)
Q Consensus 108 ~g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~d-g-~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 185 (368)
++.|..++.++.... ..........+++.++| +++++.... + .|..+|..++... ....+.. .....
T Consensus 52 ~~~I~~~d~~g~~~~-~~~~~~~p~gia~~~dG-~l~vad~~~~~~~v~~~d~~~g~~~-----~~~~~~~-~~~~~--- 120 (306)
T 2p4o_A 52 VGEIVSITPDGNQQI-HATVEGKVSGLAFTSNG-DLVATGWNADSIPVVSLVKSDGTVE-----TLLTLPD-AIFLN--- 120 (306)
T ss_dssp TTEEEEECTTCCEEE-EEECSSEEEEEEECTTS-CEEEEEECTTSCEEEEEECTTSCEE-----EEEECTT-CSCEE---
T ss_pred CCeEEEECCCCceEE-EEeCCCCceeEEEcCCC-cEEEEeccCCcceEEEEcCCCCeEE-----EEEeCCC-ccccC---
Confidence 567777777664332 22233568899999998 666655433 2 3666666554310 1111111 11111
Q ss_pred eeEEeCCCCCeEEEeeCCCcEEEEECCC
Q psy4579 186 GLSWNPSLNGYLLSASDDHTICLWDINA 213 (368)
Q Consensus 186 ~i~~~p~~~~~l~s~s~dg~i~iwd~~~ 213 (368)
.++..++ +..+++-..++.|..+|...
T Consensus 121 g~~~~~~-~~~~v~d~~~g~i~~~d~~~ 147 (306)
T 2p4o_A 121 GITPLSD-TQYLTADSYRGAIWLIDVVQ 147 (306)
T ss_dssp EEEESSS-SEEEEEETTTTEEEEEETTT
T ss_pred cccccCC-CcEEEEECCCCeEEEEeCCC
Confidence 4444443 44455555688899998765
|
| >2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A* | Back alignment and structure |
|---|
Probab=93.26 E-value=2.3 Score=39.82 Aligned_cols=52 Identities=12% Similarity=0.049 Sum_probs=34.0
Q ss_pred CCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCC
Q psy4579 278 KGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
.+.+..+|..+++.......+ ..+....+...+ .++..++.||.++.+|.++
T Consensus 443 ~g~l~a~D~~tG~~~W~~~~~--~~~~~~~~~t~g-g~v~~g~~dg~l~a~D~~t 494 (571)
T 2ad6_A 443 MGQIRAFDLTTGKAKWTKWEK--FAAWGGTLYTKG-GLVWYATLDGYLKALDNKD 494 (571)
T ss_dssp CEEEEEECTTTCCEEEEEEES--SCCCSBCEEETT-TEEEEECTTSEEEEEETTT
T ss_pred CCeEEEEECCCCCEEEEecCC--CCccceeEEECC-CEEEEEcCCCeEEEEECCC
Confidence 356778888888887766532 233333333344 3444689999999999875
|
| >3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B | Back alignment and structure |
|---|
Probab=92.84 E-value=4.1 Score=34.77 Aligned_cols=161 Identities=10% Similarity=0.006 Sum_probs=85.3
Q ss_pred CceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEE
Q psy4579 130 GGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLW 209 (368)
Q Consensus 130 ~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iw 209 (368)
...+++|++....++.+-...+.|..+++...... ...+...-.... ++++.+..+.+.++-...+.|.+.
T Consensus 36 ~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~------~~~~~~~l~~p~---glavd~~~g~ly~~d~~~~~I~~~ 106 (318)
T 3sov_A 36 DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESV------QNVVVSGLLSPD---GLACDWLGEKLYWTDSETNRIEVS 106 (318)
T ss_dssp EEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCC------CEEEEECCSCCC---EEEEETTTTEEEEEETTTTEEEEE
T ss_pred ccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCce------EEEEcCCCCCcc---EEEEEcCCCeEEEEECCCCEEEEE
Confidence 46689999865356666667888999998765211 111211111222 788887536666666677899999
Q ss_pred ECCCCCCCCccccceeeeecccccEeEEEEeeecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCC
Q psy4579 210 DINATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSG 289 (368)
Q Consensus 210 d~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 289 (368)
++..... ...+......-+.+++++. ...++..... . .+.+...++. |
T Consensus 107 ~~dG~~~-------~~l~~~~~~~P~giavdp~---------~g~ly~td~~---~------------~~~I~r~~~d-G 154 (318)
T 3sov_A 107 NLDGSLR-------KVLFWQELDQPRAIALDPS---------SGFMYWTDWG---E------------VPKIERAGMD-G 154 (318)
T ss_dssp ETTSCSC-------EEEECSSCSSEEEEEEEGG---------GTEEEEEECS---S------------SCEEEEEETT-S
T ss_pred ECCCCcE-------EEEEeCCCCCccEEEEeCC---------CCEEEEEecC---C------------CCEEEEEEcC-C
Confidence 9875421 1111122233456666541 0111111100 0 0001111110 1
Q ss_pred ceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECC
Q psy4579 290 KIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYT 331 (368)
Q Consensus 290 ~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~ 331 (368)
.....+....-..-+.++++|++..++.+=+..+.|..+|+.
T Consensus 155 ~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~d 196 (318)
T 3sov_A 155 SSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLD 196 (318)
T ss_dssp CSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCC
Confidence 111111111223458899999776787777778899999986
|
| >2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3 | Back alignment and structure |
|---|
Probab=92.54 E-value=4.2 Score=34.22 Aligned_cols=72 Identities=10% Similarity=0.023 Sum_probs=47.0
Q ss_pred CCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCC-C-cE
Q psy4579 129 KGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDD-H-TI 206 (368)
Q Consensus 129 ~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~d-g-~i 206 (368)
.....++|++++ +++++-..++.|..+|.... ....+.. .... .++++.++ ++++++.... + .|
T Consensus 32 ~~pegia~~~~g-~lyv~d~~~~~I~~~d~~g~--------~~~~~~~-~~~p---~gia~~~d-G~l~vad~~~~~~~v 97 (306)
T 2p4o_A 32 TFLENLASAPDG-TIFVTNHEVGEIVSITPDGN--------QQIHATV-EGKV---SGLAFTSN-GDLVATGWNADSIPV 97 (306)
T ss_dssp CCEEEEEECTTS-CEEEEETTTTEEEEECTTCC--------EEEEEEC-SSEE---EEEEECTT-SCEEEEEECTTSCEE
T ss_pred CCcceEEECCCC-CEEEEeCCCCeEEEECCCCc--------eEEEEeC-CCCc---eeEEEcCC-CcEEEEeccCCcceE
Confidence 567789999998 77777778899999987653 1122222 2234 38999998 6766555432 2 46
Q ss_pred EEEECCCC
Q psy4579 207 CLWDINAT 214 (368)
Q Consensus 207 ~iwd~~~~ 214 (368)
..+|..++
T Consensus 98 ~~~d~~~g 105 (306)
T 2p4o_A 98 VSLVKSDG 105 (306)
T ss_dssp EEEECTTS
T ss_pred EEEcCCCC
Confidence 66676554
|
| >1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=91.47 E-value=0.18 Score=48.50 Aligned_cols=84 Identities=10% Similarity=-0.006 Sum_probs=55.6
Q ss_pred CCcccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceee
Q psy4579 108 GGNVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGL 187 (368)
Q Consensus 108 ~g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i 187 (368)
+|.+..||+.+..+.....+..++..-.+...+ .+++.|+.||.++.||.++++ .+..++...+... .-+
T Consensus 454 ~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~tag-glvf~gt~dg~l~a~D~~tG~-------~lw~~~~~~~~~~--~p~ 523 (689)
T 1yiq_A 454 SGKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAG-NLVFEGSADGRVIAYAADTGE-------KLWEQPAASGVMA--APV 523 (689)
T ss_dssp EEEEEEEETTTTEEEEEEEESSSCCCCEEEETT-TEEEEECTTSEEEEEETTTCC-------EEEEEECSSCCCS--CCE
T ss_pred ceeEEEEECCCCCeEeEccCCCCccCccceECC-CEEEEECCCCcEEEEECCCCc-------cceeeeCCCCccc--Cce
Confidence 477888988765555545555555555666676 799999999999999999985 3455554433321 256
Q ss_pred EEeCCCCCeEEEee
Q psy4579 188 SWNPSLNGYLLSAS 201 (368)
Q Consensus 188 ~~~p~~~~~l~s~s 201 (368)
.|..++..++++.+
T Consensus 524 ty~~~G~qyv~~~~ 537 (689)
T 1yiq_A 524 TYSVDGEQYVTFMA 537 (689)
T ss_dssp EEEETTEEEEEEEE
T ss_pred EEEECCEEEEEEEe
Confidence 66666445555543
|
| >3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A | Back alignment and structure |
|---|
Probab=91.44 E-value=4.2 Score=36.20 Aligned_cols=81 Identities=15% Similarity=0.183 Sum_probs=54.6
Q ss_pred CceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcc-c--ccc--eeeec------cccceecceeeEEeCCC--CCe
Q psy4579 130 GGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRV-I--DAK--TIFTG------HTAVVEVRYGLSWNPSL--NGY 196 (368)
Q Consensus 130 ~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~-~--~~~--~~~~~------h~~~v~~~~~i~~~p~~--~~~ 196 (368)
.|..+..||+| ++||..+ +..|.|-.+..+...... . .+. +.+.- ...+|. .+.|||-. +..
T Consensus 67 ~i~qlvlSpsG-~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~---qVlWHPl~~~ds~ 141 (452)
T 3pbp_A 67 DTFHVISSTSG-DLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIK---KVLFHPKSYRDSC 141 (452)
T ss_dssp TTCEEEECTTS-SEEEEEC-SSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEE---EEEECTTBGGGCE
T ss_pred ceeEEEECCCC-CEEEEec-CCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCcee---EEEeccccCCCCe
Confidence 56779999999 8888876 568999888743211110 0 011 12221 235565 99999963 447
Q ss_pred EEEeeCCCcEEEEECCCCC
Q psy4579 197 LLSASDDHTICLWDINATP 215 (368)
Q Consensus 197 l~s~s~dg~i~iwd~~~~~ 215 (368)
|++-..|+.|++||+....
T Consensus 142 LVVLtsD~~Ir~yDl~~s~ 160 (452)
T 3pbp_A 142 IVVLKEDDTITMFDILNSQ 160 (452)
T ss_dssp EEEEETTSCEEEEETTCTT
T ss_pred EEEEecCCEEEEEEcccCC
Confidence 9999999999999998743
|
| >1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 | Back alignment and structure |
|---|
Probab=91.28 E-value=6.2 Score=33.49 Aligned_cols=76 Identities=14% Similarity=0.089 Sum_probs=45.6
Q ss_pred CCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCC-CcEE
Q psy4579 129 KGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDD-HTIC 207 (368)
Q Consensus 129 ~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~d-g~i~ 207 (368)
.....+++.+.+.+++++-...+.|.+.+...... ...+...-.... .++..|.++.++++.... +.|.
T Consensus 77 ~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~-------~~~~~~~~~~P~---~iavdp~~g~ly~~d~~~~~~I~ 146 (316)
T 1ijq_A 77 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKR-------KTLFRENGSKPR---AIVVDPVHGFMYWTDWGTPAKIK 146 (316)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSE-------EEEEECTTCCEE---EEEEETTTTEEEEEECSSSCEEE
T ss_pred CCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCce-------EEEEECCCCCcc---eEEeCCCCCEEEEEccCCCCeEE
Confidence 34578888875535666667788999999875321 111221212233 899998734444444333 6888
Q ss_pred EEECCCC
Q psy4579 208 LWDINAT 214 (368)
Q Consensus 208 iwd~~~~ 214 (368)
..++...
T Consensus 147 ~~~~dG~ 153 (316)
T 1ijq_A 147 KGGLNGV 153 (316)
T ss_dssp EEETTSC
T ss_pred EEcCCCC
Confidence 8887543
|
| >1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A | Back alignment and structure |
|---|
Probab=90.82 E-value=0.29 Score=45.60 Aligned_cols=81 Identities=10% Similarity=0.079 Sum_probs=53.8
Q ss_pred CCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCC-----CCcccccceeeeccccceecceeeEEeCCCCCeEEEeeC
Q psy4579 128 DKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPK-----ENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASD 202 (368)
Q Consensus 128 ~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~-----~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~ 202 (368)
.....++.++|||...++++..+.+|.++|+.+... ..........+..-.++. .++|+|+ +...++.-.
T Consensus 276 g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~----h~aF~~d-G~aY~t~~l 350 (595)
T 1fwx_A 276 ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPL----HTAFDGR-GNAYTSLFL 350 (595)
T ss_dssp ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEE----EEEECTT-SEEEEEETT
T ss_pred CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcc----eEEECCC-CeEEEEEec
Confidence 345678999999944555666789999999985410 000000112223233443 8999999 666667788
Q ss_pred CCcEEEEECCC
Q psy4579 203 DHTICLWDINA 213 (368)
Q Consensus 203 dg~i~iwd~~~ 213 (368)
|++|.+||+..
T Consensus 351 dsqV~kwdi~~ 361 (595)
T 1fwx_A 351 DSQVVKWNIED 361 (595)
T ss_dssp TTEEEEEEHHH
T ss_pred CCcEEEEEhhH
Confidence 99999999876
|
| >1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A | Back alignment and structure |
|---|
Probab=90.55 E-value=6.1 Score=37.54 Aligned_cols=73 Identities=15% Similarity=0.224 Sum_probs=45.8
Q ss_pred eeEecC-CCCCeeEEEeCCC-----------cEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEe
Q psy4579 133 GLSWNP-SLNGYLLSASDDH-----------TICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSA 200 (368)
Q Consensus 133 ~l~~sp-~~~~~lasg~~dg-----------~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~ 200 (368)
++++.| ++ ++++.|+.+. .+.+||..+..-. ....+........ .++++.++ +.+++.|
T Consensus 190 ~~av~~~~g-~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~-----~~~~~~~~~~~~~--~~~~~~~~-g~lyv~G 260 (656)
T 1k3i_A 190 AAAIEPTSG-RVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVS-----DRTVTVTKHDMFC--PGISMDGN-GQIVVTG 260 (656)
T ss_dssp EEEEETTTT-EEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBC-----CCEEEECSCCCSS--CEEEECTT-SCEEEEC
T ss_pred eEEEEecCC-EEEEEecccccccccCCCCeEEEEEEeCCCCcEE-----eCcccCCCCCCcc--ccccCCCC-CCEEEeC
Confidence 566777 66 8888887543 5888998876421 1222222111111 14677777 8888898
Q ss_pred eC-CCcEEEEECCCC
Q psy4579 201 SD-DHTICLWDINAT 214 (368)
Q Consensus 201 s~-dg~i~iwd~~~~ 214 (368)
+. +..+.+||..+.
T Consensus 261 G~~~~~v~~yd~~t~ 275 (656)
T 1k3i_A 261 GNDAKKTSLYDSSSD 275 (656)
T ss_dssp SSSTTCEEEEEGGGT
T ss_pred CCCCCceEEecCcCC
Confidence 84 558999998764
|
| >1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1 | Back alignment and structure |
|---|
Probab=90.48 E-value=8 Score=36.20 Aligned_cols=52 Identities=21% Similarity=0.173 Sum_probs=34.2
Q ss_pred CCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCC
Q psy4579 278 KGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
.|.+..+|..+++...+...+ .++..-.....+ .++..|+.||.++.||.++
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~--~~~~~g~~~tag-glvf~g~~dg~l~A~D~~t 516 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEH--LPLWAGVLATAG-NLVFTGTGDGYFKAFDAKS 516 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEES--SCCCSCCEEETT-TEEEEECTTSEEEEEETTT
T ss_pred cceEEEEECCCCCEEEEecCC--CCCcccceEeCC-CEEEEECCCCcEEEEECCC
Confidence 466788888899887766532 222222222234 3555789999999999976
|
| >3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A* | Back alignment and structure |
|---|
Probab=90.29 E-value=8.5 Score=33.41 Aligned_cols=33 Identities=12% Similarity=0.118 Sum_probs=27.6
Q ss_pred ccceeEEEEeCCCCcEEEEecCCCeEEEEECCC
Q psy4579 300 EGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 300 ~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
-..-+.++|+|++..++++-+..+.|..|++..
T Consensus 220 l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~ 252 (355)
T 3sre_A 220 FDFANGINISPDGKYVYIAELLAHKIHVYEKHA 252 (355)
T ss_dssp ESSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred CcccCcceECCCCCEEEEEeCCCCeEEEEEECC
Confidence 345689999999977887878889999999863
|
| >3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=90.23 E-value=8.5 Score=33.29 Aligned_cols=32 Identities=28% Similarity=0.335 Sum_probs=24.9
Q ss_pred CCceeeEecCCCCCeeEEEeCCCcEEEEeCCCC
Q psy4579 129 KGGYGLSWNPSLNGYLLSASDDHTICLWDINAT 161 (368)
Q Consensus 129 ~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~ 161 (368)
..-+.|+|.|+| .++++--..|.|++++...+
T Consensus 32 ~~P~~ia~~pdG-~llVter~~G~I~~v~~~~g 63 (347)
T 3das_A 32 NSPWGLAPLPGG-DLLVSSRDEATITRVDAKTG 63 (347)
T ss_dssp SSEEEEEECTTS-CEEEEETTTCEEEEECTTTC
T ss_pred CCceEEEEcCCC-cEEEEEecCCEEEEEECCCC
Confidence 456789999998 77777665899999876544
|
| >2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis} | Back alignment and structure |
|---|
Probab=89.87 E-value=8.7 Score=32.90 Aligned_cols=76 Identities=9% Similarity=0.074 Sum_probs=45.8
Q ss_pred CCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeec----cccceecceeeEE---eCCCCCeEEEee
Q psy4579 129 KGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTG----HTAVVEVRYGLSW---NPSLNGYLLSAS 201 (368)
Q Consensus 129 ~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~----h~~~v~~~~~i~~---~p~~~~~l~s~s 201 (368)
-.-.+++|.+....++++.-..|+|..||...+... .. .+.+ ..... .++.|.| .|+ +.++++..
T Consensus 13 ~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~-----~~-~~~~~s~~g~~~~-~~sGl~~~~~D~~-grL~vv~~ 84 (334)
T 2p9w_A 13 LTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHF-----NV-VIDGASSNGDGEQ-QMSGLSLLTHDNS-KRLFAVMK 84 (334)
T ss_dssp CCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEE-----EE-CCTTTCCSSCCSE-EEEEEEESSSSSC-CEEEEEEE
T ss_pred cCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEE-----EE-ecCCccccCCCcc-eeeEEEEeccCCC-CcEEEEEc
Confidence 345578998865245555557999999998754211 11 1221 11111 1148999 576 77776543
Q ss_pred -------------CCCcEEEEECC
Q psy4579 202 -------------DDHTICLWDIN 212 (368)
Q Consensus 202 -------------~dg~i~iwd~~ 212 (368)
.+..|..+|+.
T Consensus 85 ~~~af~~~g~~~~g~~~v~~~Dl~ 108 (334)
T 2p9w_A 85 NAKSFNFADQSSHGASSFHSFNLP 108 (334)
T ss_dssp ETTTTCTTSCCSSSCCEEEEEESS
T ss_pred ccccccccccccCCCCEEEEEcCC
Confidence 26789999998
|
| >3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=89.08 E-value=12 Score=33.40 Aligned_cols=95 Identities=8% Similarity=0.143 Sum_probs=54.0
Q ss_pred CcccCCCCCeeeeeccccCCCCceeeEecCCCCC-eeEEEeCCC----cEEEEeCCCCCCCCcccccceeeeccccceec
Q psy4579 109 GNVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNG-YLLSASDDH----TICLWDINATPKENRVIDAKTIFTGHTAVVEV 183 (368)
Q Consensus 109 g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~-~lasg~~dg----~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~ 183 (368)
+.|..++.++..+..+.........|+|++++ + ++++...++ .+...+.... .. ....+.....+
T Consensus 159 ~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G-~~lyvad~~~~~~~~~v~~~~~~g~-~~-----~~~~l~~~~~p--- 228 (430)
T 3tc9_A 159 HPTRLIDFEKEYVSTVYSGLSKVRTICWTHEA-DSMIITNDQNNNDRPNNYILTRESG-FK-----VITELTKGQNC--- 228 (430)
T ss_dssp EEEEEEETTTTEEEEEECCCSCEEEEEECTTS-SEEEEEECCSCTTSEEEEEEEGGGT-SC-----SEEEEEECSSC---
T ss_pred CcEEEEECCCCEEEEEecCCCCcceEEEeCCC-CEEEEEeCCCCcccceEEEEeCCCc-ee-----eeeeeccCCCc---
Confidence 45555665554333444444567889999998 6 555544333 2333443221 11 11222222222
Q ss_pred ceeeEEeCCCCCeEEEeeCCCcEEEEECCCC
Q psy4579 184 RYGLSWNPSLNGYLLSASDDHTICLWDINAT 214 (368)
Q Consensus 184 ~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~ 214 (368)
..++++|+++.++++-..++.|..+|....
T Consensus 229 -~giavdp~~g~lyv~d~~~~~V~~~~~~~~ 258 (430)
T 3tc9_A 229 -NGAETHPINGELYFNSWNAGQVFRYDFTTQ 258 (430)
T ss_dssp -CCEEECTTTCCEEEEETTTTEEEEEETTTT
T ss_pred -eEEEEeCCCCEEEEEECCCCEEEEEECCCC
Confidence 288999953777777667889999998754
|
| >4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A* | Back alignment and structure |
|---|
Probab=88.81 E-value=16 Score=34.51 Aligned_cols=161 Identities=9% Similarity=0.009 Sum_probs=86.5
Q ss_pred CCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEE
Q psy4579 129 KGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICL 208 (368)
Q Consensus 129 ~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~i 208 (368)
.....|+|++.+..++.+-..++.|..+++..... ...+...-.... .|++.+..+++..+-...+.|.+
T Consensus 37 ~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~-------~~v~~~g~~~P~---GlAvD~~~~~LY~tD~~~~~I~v 106 (628)
T 4a0p_A 37 KEASALDFDVTDNRIYWTDISLKTISRAFMNGSAL-------EHVVEFGLDYPE---GMAVDWLGKNLYWADTGTNRIEV 106 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-------EEEECSSCSCCC---EEEEETTTTEEEEEETTTTEEEE
T ss_pred CceEEEEEECCCCEEEEEECCCCeEEEEECCCCCc-------EEEEeCCCCCcc---eEEEEeCCCEEEEEECCCCEEEE
Confidence 45778999997635666666789999998875421 122221112222 77777663556666667789999
Q ss_pred EECCCCCCCCccccceeeeecccccEeEEEEeeecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCC
Q psy4579 209 WDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVS 288 (368)
Q Consensus 209 wd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 288 (368)
.++..... ...+...-..-..++++|. ...++..... . .+.+...++.
T Consensus 107 ~~~dG~~~-------~~l~~~~l~~P~~iavdp~---------~G~lY~tD~g---~------------~~~I~r~~~d- 154 (628)
T 4a0p_A 107 SKLDGQHR-------QVLVWKDLDSPRALALDPA---------EGFMYWTEWG---G------------KPKIDRAAMD- 154 (628)
T ss_dssp EETTSTTC-------EEEECSSCCCEEEEEEETT---------TTEEEEEECS---S------------SCEEEEEETT-
T ss_pred EecCCCcE-------EEEEeCCCCCcccEEEccC---------CCeEEEeCCC---C------------CCEEEEEeCC-
Confidence 99875421 1111122223456666641 0112211100 0 0001111111
Q ss_pred CceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCC
Q psy4579 289 GKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 289 ~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
|.....+. ..-...+.+++++++..++.+=+..+.|...|+..
T Consensus 155 G~~~~~l~-~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG 197 (628)
T 4a0p_A 155 GSERTTLV-PNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLG 197 (628)
T ss_dssp SCSCEEEE-CSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCceEEEE-CCCCCcceEEEccccCEEEEEECCCCEEEEEcCCC
Confidence 11111111 23345788999998767877777788999999863
|
| >3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=88.31 E-value=15 Score=33.53 Aligned_cols=32 Identities=9% Similarity=-0.057 Sum_probs=24.4
Q ss_pred ccceeEEEEeCCCCcEEEEecCCCeEEEEECC
Q psy4579 300 EGEVNRARYMPQNPCVIATKTPSSDVLVFDYT 331 (368)
Q Consensus 300 ~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~ 331 (368)
...-..++|+|++..++++-+....|+.++..
T Consensus 309 ~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~d 340 (496)
T 3kya_A 309 PSWEFQIFIHPTGKYAYFGVINNHYFMRSDYD 340 (496)
T ss_dssp SSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred CCCceEEEEcCCCCEEEEEeCCCCEEEEEecC
Confidence 34457899999996566676778899997764
|
| >2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A | Back alignment and structure |
|---|
Probab=85.15 E-value=15 Score=33.26 Aligned_cols=27 Identities=7% Similarity=0.052 Sum_probs=20.7
Q ss_pred eeeEEeCCCCC-eEEEeeCCCcEEEEECC
Q psy4579 185 YGLSWNPSLNG-YLLSASDDHTICLWDIN 212 (368)
Q Consensus 185 ~~i~~~p~~~~-~l~s~s~dg~i~iwd~~ 212 (368)
+.|+|.|+ +. .|+.+...|.|++++..
T Consensus 17 ~~~a~~pd-G~~rl~V~er~G~i~~~~~~ 44 (463)
T 2wg3_C 17 VGALHSGD-GSQRLFILEKEGYVKILTPE 44 (463)
T ss_dssp EEEECCSS-SSCCEEEEETTTEEEEECTT
T ss_pred eEEEECCC-CCeEEEEEeCCceEEEEeCC
Confidence 39999998 54 45556789999999754
|
| >3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L | Back alignment and structure |
|---|
Probab=85.01 E-value=20 Score=31.61 Aligned_cols=76 Identities=14% Similarity=0.085 Sum_probs=45.8
Q ss_pred CCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEee-CCCcEE
Q psy4579 129 KGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSAS-DDHTIC 207 (368)
Q Consensus 129 ~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s-~dg~i~ 207 (368)
.....|++.+.+.+++++-...+.|.+.+++.... ...+...-.... .|++.|..+.++.+-. ..+.|.
T Consensus 159 ~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~-------~~l~~~~~~~P~---~iavdp~~g~ly~td~~~~~~I~ 228 (400)
T 3p5b_L 159 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKR-------KTLFRENGSKPR---AIVVDPVHGFMYWTDWGTPAKIK 228 (400)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSE-------EEEEECSSCCEE---EEEEETTTTEEEEEECSSSCCEE
T ss_pred CCcccEEEEecCCceEEEECCCCeEEEEeCCCCce-------EEEEeCCCCCcc---eEEEecccCeEEEEeCCCCCEEE
Confidence 45677888875436666767788899988875421 112221112232 8999997344444432 246888
Q ss_pred EEECCCC
Q psy4579 208 LWDINAT 214 (368)
Q Consensus 208 iwd~~~~ 214 (368)
..++...
T Consensus 229 ~~~~dG~ 235 (400)
T 3p5b_L 229 KGGLNGV 235 (400)
T ss_dssp EEETTSC
T ss_pred EEeCCCC
Confidence 8888654
|
| >3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A* | Back alignment and structure |
|---|
Probab=84.61 E-value=17 Score=31.46 Aligned_cols=27 Identities=11% Similarity=0.105 Sum_probs=20.2
Q ss_pred CCceeeEecCCCCCeeEEEeCCCcEEEEe
Q psy4579 129 KGGYGLSWNPSLNGYLLSASDDHTICLWD 157 (368)
Q Consensus 129 ~~v~~l~~sp~~~~~lasg~~dg~v~iwd 157 (368)
..-..++|.|+| +++++ ..+|.|++++
T Consensus 29 ~~P~~ia~~pdG-~l~V~-e~~g~I~~~d 55 (354)
T 3a9g_A 29 EVPWSIAPLGGG-RYLVT-ERPGRLVLIS 55 (354)
T ss_dssp SCEEEEEEEETT-EEEEE-ETTTEEEEEC
T ss_pred CCCeEEEEcCCC-eEEEE-eCCCEEEEEe
Confidence 346789999998 65554 5569999887
|
| >2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12} | Back alignment and structure |
|---|
Probab=83.89 E-value=20 Score=30.87 Aligned_cols=29 Identities=14% Similarity=0.257 Sum_probs=21.3
Q ss_pred CceeeEecCCCCCeeEEEeCCCcEEEEeCC
Q psy4579 130 GGYGLSWNPSLNGYLLSASDDHTICLWDIN 159 (368)
Q Consensus 130 ~v~~l~~sp~~~~~lasg~~dg~v~iwd~~ 159 (368)
.-..|+|.|+| +.|..+...|.|++++..
T Consensus 19 ~P~~i~~~pdG-~~l~V~e~~G~i~~~~~~ 47 (353)
T 2g8s_A 19 HPWALAFLPDN-HGMLITLRGGELRHWQAG 47 (353)
T ss_dssp SEEEEEECSTT-CCEEEEETTTEEEEEETT
T ss_pred CcEEEEEcCCC-CEEEEEeCCceEEEEeCC
Confidence 45789999998 724445567999998853
|
| >3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A | Back alignment and structure |
|---|
Probab=83.88 E-value=5.3 Score=35.58 Aligned_cols=35 Identities=17% Similarity=0.303 Sum_probs=29.7
Q ss_pred CCCCceeeEecCCCC--CeeEEEeCCCcEEEEeCCCC
Q psy4579 127 TDKGGYGLSWNPSLN--GYLLSASDDHTICLWDINAT 161 (368)
Q Consensus 127 h~~~v~~l~~sp~~~--~~lasg~~dg~v~iwd~~~~ 161 (368)
...+|..+.|+|-+. ..|++-..|+.||+||+...
T Consensus 123 ~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s 159 (452)
T 3pbp_A 123 PKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNS 159 (452)
T ss_dssp CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCT
T ss_pred CCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccC
Confidence 357899999999763 37889999999999999874
|
| >1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A* | Back alignment and structure |
|---|
Probab=83.56 E-value=29 Score=32.49 Aligned_cols=52 Identities=12% Similarity=0.054 Sum_probs=33.8
Q ss_pred CCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCC
Q psy4579 278 KGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
.|.+..+|..++++......+ .++..-.....+ .++..|+.||.++.+|.++
T Consensus 452 ~G~l~A~D~~tG~~~W~~~~~--~~~~~g~~~tag-g~vf~gt~dg~l~A~D~~t 503 (599)
T 1w6s_A 452 LGQIKAYNAITGDYKWEKMER--FAVWGGTMATAG-DLVFYGTLDGYLKARDSDT 503 (599)
T ss_dssp CEEEEEECTTTCCEEEEEEES--SCCCSBCEEETT-TEEEEECTTSEEEEEETTT
T ss_pred cCeEEEEECCCCCEEeEecCC--CCccCcceEecC-CEEEEECCCCeEEEEECCC
Confidence 466788888899887766532 222221222344 3444689999999999976
|
| >4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=82.58 E-value=26 Score=31.21 Aligned_cols=95 Identities=7% Similarity=0.016 Sum_probs=50.6
Q ss_pred CcccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCC---Cc-EEEEeCCCCCCCCcccccceeeeccccceecc
Q psy4579 109 GNVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDD---HT-ICLWDINATPKENRVIDAKTIFTGHTAVVEVR 184 (368)
Q Consensus 109 g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~d---g~-v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~ 184 (368)
+.|+.++.....+..+........+++++++| +++++.... .. +...+...... ....+.....+
T Consensus 162 ~~I~~id~~~g~v~~~~~~~~~P~giavd~dG-~lyVad~~~~~~~~gv~~~~~~~~~~------~~~~~~~~~~P---- 230 (433)
T 4hw6_A 162 DAFRHVDFVNQYVDIKTTNIGQCADVNFTLNG-DMVVVDDQSSDTNTGIYLFTRASGFT------ERLSLCNARGA---- 230 (433)
T ss_dssp SCEEEEETTTTEEEEECCCCSCEEEEEECTTC-CEEEEECCSCTTSEEEEEECGGGTTC------CEEEEEECSSB----
T ss_pred CCEEEEECCCCEEEEeecCCCCccEEEECCCC-CEEEEcCCCCcccceEEEEECCCCee------ccccccccCCC----
Confidence 34444554333333333344567899999999 655554421 11 22233222110 00122222222
Q ss_pred eeeEEeCCCCCeEEEeeCCCcEEEEECCCC
Q psy4579 185 YGLSWNPSLNGYLLSASDDHTICLWDINAT 214 (368)
Q Consensus 185 ~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~ 214 (368)
..+++.|+++.+.++-..++.|..+|..++
T Consensus 231 ~giavd~~~G~lyv~d~~~~~V~~~d~~~g 260 (433)
T 4hw6_A 231 KTCAVHPQNGKIYYTRYHHAMISSYDPATG 260 (433)
T ss_dssp CCCEECTTTCCEEECBTTCSEEEEECTTTC
T ss_pred CEEEEeCCCCeEEEEECCCCEEEEEECCCC
Confidence 288999953666666667889999998755
|
| >3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B | Back alignment and structure |
|---|
Probab=81.24 E-value=24 Score=29.88 Aligned_cols=74 Identities=11% Similarity=0.164 Sum_probs=45.5
Q ss_pred CCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeee-ccccceecceeeEEeCCCCCeEEEee--CCCc
Q psy4579 129 KGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFT-GHTAVVEVRYGLSWNPSLNGYLLSAS--DDHT 205 (368)
Q Consensus 129 ~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~i~~~p~~~~~l~s~s--~dg~ 205 (368)
.....+++.+.+..++++-...+.|.++++.... ...+. ..-... ..+++.|. +..|+... ..+.
T Consensus 79 ~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~--------~~~l~~~~~~~P---~giavdp~-~g~ly~td~~~~~~ 146 (318)
T 3sov_A 79 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSL--------RKVLFWQELDQP---RAIALDPS-SGFMYWTDWGEVPK 146 (318)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS--------CEEEECSSCSSE---EEEEEEGG-GTEEEEEECSSSCE
T ss_pred CCccEEEEEcCCCeEEEEECCCCEEEEEECCCCc--------EEEEEeCCCCCc---cEEEEeCC-CCEEEEEecCCCCE
Confidence 3466788887553666776777899999987542 12221 222222 28999987 44444444 3578
Q ss_pred EEEEECCCC
Q psy4579 206 ICLWDINAT 214 (368)
Q Consensus 206 i~iwd~~~~ 214 (368)
|...++...
T Consensus 147 I~r~~~dG~ 155 (318)
T 3sov_A 147 IERAGMDGS 155 (318)
T ss_dssp EEEEETTSC
T ss_pred EEEEEcCCC
Confidence 888887643
|
| >2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus} | Back alignment and structure |
|---|
Probab=80.83 E-value=14 Score=31.34 Aligned_cols=68 Identities=6% Similarity=-0.019 Sum_probs=40.0
Q ss_pred CCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeee---ccccceecceeeEEeCCCCCeEEEeeCCCc
Q psy4579 129 KGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFT---GHTAVVEVRYGLSWNPSLNGYLLSASDDHT 205 (368)
Q Consensus 129 ~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~---~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~ 205 (368)
..+.++.+.+++ .+++++. +|.+. +..+.+.. ...+. .....+ +++.|.+ +..++.++.+|.
T Consensus 250 ~~~~~v~~~~~~-~~~~~g~-~g~i~-~S~DgG~t-------W~~~~~~~~~~~~~---~~v~~~~--~~~~~~~G~~G~ 314 (327)
T 2xbg_A 250 VGFLDLAYRTPN-EVWLAGG-AGALL-CSQDGGQT-------WQQDVDVKKVPSNF---YKILFFS--PDQGFILGQKGI 314 (327)
T ss_dssp SCEEEEEESSSS-CEEEEES-TTCEE-EESSTTSS-------CEECGGGTTSSSCC---CEEEEEE--TTEEEEECSTTE
T ss_pred cceEEEEecCCC-EEEEEeC-CCeEE-EeCCCCcc-------cEEcCccCCCCCCe---EEEEEEC--CCceEEEcCCce
Confidence 458899999876 6666554 67663 34443321 12222 122334 4888875 445677788998
Q ss_pred EEEEEC
Q psy4579 206 ICLWDI 211 (368)
Q Consensus 206 i~iwd~ 211 (368)
|.-++-
T Consensus 315 i~~~~~ 320 (327)
T 2xbg_A 315 LLRYVT 320 (327)
T ss_dssp EEEECC
T ss_pred EEEEcC
Confidence 877653
|
| >1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A | Back alignment and structure |
|---|
Probab=80.40 E-value=6 Score=37.58 Aligned_cols=75 Identities=7% Similarity=-0.046 Sum_probs=46.7
Q ss_pred CCceeeEecCCCCCeeEEEe-CCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEee-CC---
Q psy4579 129 KGGYGLSWNPSLNGYLLSAS-DDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSAS-DD--- 203 (368)
Q Consensus 129 ~~v~~l~~sp~~~~~lasg~-~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s-~d--- 203 (368)
....++++.+++ .+++.|+ .+..+.+||..+..= .....+...... .+++..++ +.+++.|+ .+
T Consensus 243 ~~~~~~~~~~~g-~lyv~GG~~~~~v~~yd~~t~~W-----~~~~~~~~~R~~----~s~~~~~d-g~iyv~GG~~~~~~ 311 (656)
T 1k3i_A 243 MFCPGISMDGNG-QIVVTGGNDAKKTSLYDSSSDSW-----IPGPDMQVARGY----QSSATMSD-GRVFTIGGSWSGGV 311 (656)
T ss_dssp CSSCEEEECTTS-CEEEECSSSTTCEEEEEGGGTEE-----EECCCCSSCCSS----CEEEECTT-SCEEEECCCCCSSS
T ss_pred CccccccCCCCC-CEEEeCCCCCCceEEecCcCCce-----eECCCCCccccc----cceEEecC-CeEEEEeCcccCCc
Confidence 334457778888 8888888 456899999876421 011111111111 14556666 88888888 44
Q ss_pred --CcEEEEECCCC
Q psy4579 204 --HTICLWDINAT 214 (368)
Q Consensus 204 --g~i~iwd~~~~ 214 (368)
..+.+||..+.
T Consensus 312 ~~~~~e~yd~~t~ 324 (656)
T 1k3i_A 312 FEKNGEVYSPSSK 324 (656)
T ss_dssp CCCCEEEEETTTT
T ss_pred ccccceEeCCCCC
Confidence 46899998764
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 368 | ||||
| d1sq9a_ | 393 | b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake | 4e-09 | |
| d1sq9a_ | 393 | b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake | 1e-05 | |
| d1sq9a_ | 393 | b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake | 5e-04 | |
| d1sq9a_ | 393 | b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake | 0.003 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 1e-08 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 2e-04 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 0.003 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 1e-08 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 0.001 | |
| d1pgua1 | 325 | b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba | 3e-08 | |
| d1pgua1 | 325 | b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba | 2e-04 | |
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 3e-08 | |
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 1e-05 | |
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 2e-04 | |
| d1pgua2 | 287 | b.69.4.1 (A:327-613) Actin interacting protein 1 { | 5e-08 | |
| d1p22a2 | 293 | b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be | 6e-08 | |
| d1p22a2 | 293 | b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be | 0.001 | |
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 8e-08 | |
| d1gxra_ | 337 | b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum | 1e-07 | |
| d1nr0a1 | 311 | b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne | 4e-07 | |
| d1nr0a1 | 311 | b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne | 0.003 | |
| d1nr0a2 | 299 | b.69.4.1 (A:313-611) Actin interacting protein 1 { | 3e-06 | |
| d1nr0a2 | 299 | b.69.4.1 (A:313-611) Actin interacting protein 1 { | 0.004 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 4e-06 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 6e-04 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 0.002 | |
| d1yfqa_ | 342 | b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake | 2e-05 | |
| d1yfqa_ | 342 | b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake | 0.001 | |
| d1qksa2 | 432 | b.70.2.1 (A:136-567) C-terminal (heme d1) domain o | 0.001 | |
| d2ovrb2 | 342 | b.69.4.1 (B:2365-2706) F-box/WD repeat-containing | 0.001 | |
| d2ovrb2 | 342 | b.69.4.1 (B:2365-2706) F-box/WD repeat-containing | 0.001 | |
| d1jmxb_ | 346 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 0.001 | |
| d1k32a3 | 360 | b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar | 0.003 |
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 55.2 bits (131), Expect = 4e-09
Identities = 17/96 (17%), Positives = 36/96 (37%), Gaps = 5/96 (5%)
Query: 132 YGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAV--VEVRYGLSW 189
+ +S S + +S S D + +WD EN + + F + + V+V +
Sbjct: 18 FSVSACNS---FTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIER 74
Query: 190 NPSLNGYLLSASDDHTICLWDINATPKENRVIDAKT 225
+ + + S + + I + +VI K
Sbjct: 75 DAFELCLVATTSFSGDLLFYRITREDETKKVIFEKL 110
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 44.5 bits (103), Expect = 1e-05
Identities = 13/102 (12%), Positives = 29/102 (28%), Gaps = 4/102 (3%)
Query: 134 LSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSL 193
+ + + + S + + I + +VI K + L W S
Sbjct: 72 IERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASN 131
Query: 194 NG----YLLSASDDHTICLWDINATPKENRVIDAKTIFTGHT 231
+ L++ T +W + E+ + T
Sbjct: 132 DRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLEL 173
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 39.5 bits (90), Expect = 5e-04
Identities = 18/93 (19%), Positives = 32/93 (34%), Gaps = 11/93 (11%)
Query: 168 IDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIF 227
I H A + + +S S + +S S D + +WD EN + + F
Sbjct: 4 IATANAGKAHDADI---FSVSACNS---FTVSCSGDGYLKVWDNKLLDNENPKDKSYSHF 57
Query: 228 TGHTAVVEDYSIHRLILGTHTSDEQNHLLIASV 260
+ + H +L D L+A+
Sbjct: 58 VHKSGL-----HHVDVLQAIERDAFELCLVATT 85
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 36.8 bits (83), Expect = 0.003
Identities = 15/162 (9%), Positives = 47/162 (29%), Gaps = 10/162 (6%)
Query: 103 YDTDKGGNVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNG----YLLSASDDHTICLWDI 158
Y + + + + + L W S + L++ T +W
Sbjct: 94 YRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKF 153
Query: 159 NATPKENRVIDAKTIFTGH------TAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDIN 212
+ E+ + T + + ++ S + S G + + ++ T+ + +++
Sbjct: 154 HPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERGLIATGFNNGTVQISELS 213
Query: 213 ATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNH 254
++ ++ + L D +
Sbjct: 214 TLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSF 255
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 53.6 bits (127), Expect = 1e-08
Identities = 17/77 (22%), Positives = 29/77 (37%), Gaps = 12/77 (15%)
Query: 134 LSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSL 193
+S++ S LL+ DD +WD K +R + GH V L
Sbjct: 276 VSFSKS-GRLLLAGYDDFNCNVWDA---LKADRA----GVLAGHDNRV---SCLGVTDD- 323
Query: 194 NGYLLSASDDHTICLWD 210
+ + S D + +W+
Sbjct: 324 GMAVATGSWDSFLKIWN 340
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 40.9 bits (94), Expect = 2e-04
Identities = 26/109 (23%), Positives = 41/109 (37%), Gaps = 17/109 (15%)
Query: 132 YGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNP 191
+ + P+ N + SDD T L+D+ A + I G T+V S++
Sbjct: 230 NAICFFPNGN-AFATGSDDATCRLFDLRADQELMTYSH-DNIICGITSV-------SFSK 280
Query: 192 SLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIH 240
S LL+ DD +WD K +R + GH V +
Sbjct: 281 S-GRLLLAGYDDFNCNVWDA---LKADRA----GVLAGHDNRVSCLGVT 321
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 36.6 bits (83), Expect = 0.003
Identities = 16/74 (21%), Positives = 28/74 (37%), Gaps = 11/74 (14%)
Query: 136 WNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNG 195
+S + D + LWD+ + FTGH + + + + P+ N
Sbjct: 191 SLAPDTRLFVSGACDASAKLWDVR-EGMCRQT------FTGHESDI---NAICFFPNGN- 239
Query: 196 YLLSASDDHTICLW 209
+ SDD T L+
Sbjct: 240 AFATGSDDATCRLF 253
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 53.7 bits (127), Expect = 1e-08
Identities = 10/81 (12%), Positives = 25/81 (30%), Gaps = 10/81 (12%)
Query: 132 YGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNP 191
+WN + ++H + +++ H V G+ W P
Sbjct: 11 SCHAWNKD-RTQIAICPNNHEVHIYEK-----SGNKWVQVHELKEHNGQV---TGVDWAP 61
Query: 192 SLNGYLLSASDDHTICLWDIN 212
+ +++ D +W +
Sbjct: 62 D-SNRIVTCGTDRNAYVWTLK 81
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 38.3 bits (87), Expect = 0.001
Identities = 10/68 (14%), Positives = 20/68 (29%), Gaps = 1/68 (1%)
Query: 146 SASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHT 205
+ D A+ E + + H V LS + + D
Sbjct: 294 GLTARERFQNLDKKASS-EGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGG 352
Query: 206 ICLWDINA 213
+ +WD+ +
Sbjct: 353 MSIWDVRS 360
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 52.6 bits (124), Expect = 3e-08
Identities = 14/71 (19%), Positives = 30/71 (42%), Gaps = 8/71 (11%)
Query: 141 NGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSA 200
+ + D TI +WD+ T K + +T + + + + NG ++S
Sbjct: 263 SQKFATVGADATIRVWDVT-TSKCVQK------WTLDKQQLGNQ-QVGVVATGNGRIISL 314
Query: 201 SDDHTICLWDI 211
S D T+ +++
Sbjct: 315 SLDGTLNFYEL 325
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 40.3 bits (92), Expect = 2e-04
Identities = 24/110 (21%), Positives = 42/110 (38%), Gaps = 11/110 (10%)
Query: 134 LSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGH-TAVVEVRYGLSWNPS 192
LS++P+ N + D + K V+ FTGH ++VV + ++P
Sbjct: 23 LSYDPTTNAIAYPCGKSAFVRCLD-DGDSKVPPVVQ----FTGHGSSVVTT---VKFSPI 74
Query: 193 LNG-YLLSASDDHTICLWDINATPKENRVI-DAKTIFTGHTAVVEDYSIH 240
YL S + + +W + N V + K+ F + D S
Sbjct: 75 KGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWD 124
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 52.1 bits (123), Expect = 3e-08
Identities = 18/79 (22%), Positives = 36/79 (45%), Gaps = 12/79 (15%)
Query: 132 YGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNP 191
G+ ++ ++LS +DD T+ +WD K R + H V L ++
Sbjct: 251 RGVLFHSG-GKFILSCADDKTLRVWDY----KNKRCMK---TLNAHEHFV---TSLDFHK 299
Query: 192 SLNGYLLSASDDHTICLWD 210
+ Y+++ S D T+ +W+
Sbjct: 300 T-APYVVTGSVDQTVKVWE 317
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 44.3 bits (103), Expect = 1e-05
Identities = 27/114 (23%), Positives = 43/114 (37%), Gaps = 18/114 (15%)
Query: 127 TDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYG 186
++ G + +LLS S D TI +WD++ T GH V G
Sbjct: 203 SEATGSETKKSGKPGPFLLSGSRDKTIKMWDVS-TGMCLMT------LVGHDNWV---RG 252
Query: 187 LSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIH 240
+ ++ ++LS +DD T+ +WD K R + H V H
Sbjct: 253 VLFHSG-GKFILSCADDKTLRVWDY----KNKRCMK---TLNAHEHFVTSLDFH 298
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 40.1 bits (92), Expect = 2e-04
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 11/70 (15%)
Query: 171 KTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGH 230
K +GH + V + ++P ++SAS+D TI +WD D + GH
Sbjct: 10 KYALSGHRSPV---TRVIFHPV-FSVMVSASEDATIKVWDYETG-------DFERTLKGH 58
Query: 231 TAVVEDYSIH 240
T V+D S
Sbjct: 59 TDSVQDISFD 68
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 51.5 bits (121), Expect = 5e-08
Identities = 14/81 (17%), Positives = 25/81 (30%), Gaps = 11/81 (13%)
Query: 131 GYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWN 190
G + + + S D I ++ + K + H V L W
Sbjct: 217 EKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIK------ALNAHKDGV---NNLLWE 267
Query: 191 PSLNGYLLSASDDHTICLWDI 211
L+S+ D I W++
Sbjct: 268 T--PSTLVSSGADACIKRWNV 286
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.4 bits (121), Expect = 6e-08
Identities = 17/77 (22%), Positives = 31/77 (40%), Gaps = 8/77 (10%)
Query: 136 WNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTI--FTGHTAVVEVRYGLSWNPSL 193
N ++S + D I +WD+ A + H+ V + L ++
Sbjct: 223 CIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRV---FRLQFDEF- 278
Query: 194 NGYLLSASDDHTICLWD 210
++S+S D TI +WD
Sbjct: 279 --QIVSSSHDDTILIWD 293
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.9 bits (86), Expect = 0.001
Identities = 31/220 (14%), Positives = 57/220 (25%), Gaps = 12/220 (5%)
Query: 126 DTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRY 185
+T KG Y L ++ ++S D+TI +WD N + K I TGHT V
Sbjct: 13 ETSKGVYCLQYDDQ---KIVSGLRDNTIKIWDKNTL-------ECKRILTGHTGSVLCLQ 62
Query: 186 GLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLILG 245
+ +N + G +
Sbjct: 63 YDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDM 122
Query: 246 THTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNR 305
+D ++ + FD + GD V E G
Sbjct: 123 ASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGD--RTIKVWNTSTCEFVRTLNGHKRG 180
Query: 306 ARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHP 345
+ ++ + + + + ++D G
Sbjct: 181 IACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEEL 220
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 51.3 bits (121), Expect = 8e-08
Identities = 21/137 (15%), Positives = 38/137 (27%), Gaps = 17/137 (12%)
Query: 78 SDEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQFDASNYDTDKGGYGLSWN 137
+ + ++ S D N + + + ++
Sbjct: 263 TRDGQSVVSGS-----LDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATT 317
Query: 138 PSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVV---EVRYGLSWNPSLN 194
+ + Y+LS S D + WD + + GH V V G S P N
Sbjct: 318 QN-DEYILSGSKDRGVLFWDKK-SGNPLLM------LQGHRNSVISVAVANGSSLGPEYN 369
Query: 195 GYLLSASDDHTICLWDI 211
+ S D +W
Sbjct: 370 -VFATGSGDCKARIWKY 385
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.6 bits (119), Expect = 1e-07
Identities = 9/80 (11%), Positives = 26/80 (32%), Gaps = 13/80 (16%)
Query: 132 YGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNP 191
L + + +S D+ + W A + ++ V +
Sbjct: 269 LSLKFAYC-GKWFVSTGKDNLLNAWRTPY--------GASIFQSKESSSV---LSCDISV 316
Query: 192 SLNGYLLSASDDHTICLWDI 211
+ Y+++ S D ++++
Sbjct: 317 D-DKYIVTGSGDKKATVYEV 335
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 48.7 bits (114), Expect = 4e-07
Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 10/69 (14%)
Query: 143 YLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASD 202
+ SAS D TI +W++ AT K + I T + + + G+ W L+S S
Sbjct: 252 KIASASADKTIKIWNV-ATLKVEKTIP------VGTRIEDQQLGIIWTK---QALVSISA 301
Query: 203 DHTICLWDI 211
+ I +
Sbjct: 302 NGFINFVNP 310
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 36.8 bits (83), Expect = 0.003
Identities = 11/82 (13%), Positives = 24/82 (29%), Gaps = 13/82 (15%)
Query: 131 GYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWN 190
L P G + + ++ + + + + +T H+ +
Sbjct: 20 AVVLGNTP--AGDKIQYCNGTSVYTVPVG-SLTDTEI------YTEHSHQT---TVAKTS 67
Query: 191 PSLNGYLLSASDDHTICLWDIN 212
PS Y S + +WD
Sbjct: 68 PS-GYYCASGDVHGNVRIWDTT 88
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 46.1 bits (107), Expect = 3e-06
Identities = 15/76 (19%), Positives = 31/76 (40%), Gaps = 9/76 (11%)
Query: 136 WNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNG 195
N L + S D+++ +W++N P ++ +I + V + W
Sbjct: 231 SWSPDNVRLATGSLDNSVIVWNMN-KPSDHPII---IKGAHAMSSV---NSVIWLN--ET 281
Query: 196 YLLSASDDHTICLWDI 211
++SA D I W++
Sbjct: 282 TIVSAGQDSNIKFWNV 297
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 36.5 bits (82), Expect = 0.004
Identities = 18/87 (20%), Positives = 30/87 (34%), Gaps = 12/87 (13%)
Query: 132 YGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNP 191
LS + L SA + I WDI+ T NR H ++ G+
Sbjct: 16 TALSSSAD-GKTLFSADAEGHINSWDIS-TGISNR-----VFPDVHATMI---TGIKTTS 65
Query: 192 SLNGYLLSASDDHTICLWDINATPKEN 218
G L + S D + + + ++
Sbjct: 66 --KGDLFTVSWDDHLKVVPAGGSGVDS 90
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 46.0 bits (107), Expect = 4e-06
Identities = 3/74 (4%), Positives = 26/74 (35%), Gaps = 11/74 (14%)
Query: 139 SLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLL 198
++ +L + ++ ++++ + +++ + + +++ +
Sbjct: 291 YVSDNILVSGSENQFNIYNL----RSGKLV--HANILKDADQI---WSVNFKG--KTLVA 339
Query: 199 SASDDHTICLWDIN 212
+ D L ++
Sbjct: 340 AVEKDGQSFLEILD 353
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 39.1 bits (89), Expect = 6e-04
Identities = 18/76 (23%), Positives = 32/76 (42%), Gaps = 15/76 (19%)
Query: 134 LSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSL 193
L + + Y+++ +DD I ++D K +GH V + L +
Sbjct: 19 LQFEDN---YVITGADDKMIRVYDSI-NKKFLLQ------LSGHDGGV---WALKYAH-- 63
Query: 194 NGYLLSASDDHTICLW 209
G L+S S D T+ +W
Sbjct: 64 GGILVSGSTDRTVRVW 79
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 37.6 bits (85), Expect = 0.002
Identities = 14/64 (21%), Positives = 24/64 (37%), Gaps = 12/64 (18%)
Query: 171 KTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGH 230
+T GH V L + + Y+++ +DD I ++D K +GH
Sbjct: 5 RTTLRGHMT--SVITCLQFEDN---YVITGADDKMIRVYDSI-NKKFLLQ------LSGH 52
Query: 231 TAVV 234
V
Sbjct: 53 DGGV 56
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 43.7 bits (101), Expect = 2e-05
Identities = 9/81 (11%), Positives = 26/81 (32%), Gaps = 8/81 (9%)
Query: 132 YGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNP 191
+ PS LL S D ++ ++ + K ++ + + ++
Sbjct: 15 SDIKIIPS-KSLLLITSWDGSLTVYKFDIQAKNVDLL----QSLRYKHPL---LCCNFID 66
Query: 192 SLNGYLLSASDDHTICLWDIN 212
+ + + + I D+
Sbjct: 67 NTDLQIYVGTVQGEILKVDLI 87
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 38.3 bits (87), Expect = 0.001
Identities = 8/69 (11%), Positives = 20/69 (28%), Gaps = 8/69 (11%)
Query: 172 TIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHT 231
I + + PS LL S D ++ ++ + K ++ +
Sbjct: 5 QIEQAPKDYI---SDIKIIPS-KSLLLITSWDGSLTVYKFDIQAKNVDLL----QSLRYK 56
Query: 232 AVVEDYSIH 240
+ +
Sbjct: 57 HPLLCCNFI 65
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} Length = 432 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Score = 38.2 bits (88), Expect = 0.001
Identities = 31/192 (16%), Positives = 52/192 (27%), Gaps = 31/192 (16%)
Query: 141 NGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNG-YLLS 199
N + ++ D I L D + + AV R S +G YL
Sbjct: 32 NLFSVTLRDAGQIALID----GSTYEIKT---VLDTGYAVHISRL------SASGRYLFV 78
Query: 200 ASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIAS 259
D + + D+ I G R I + ++ IA
Sbjct: 79 IGRDGKVNMIDLWM----KEPTTVAEIKIGSE--------ARSIETSKMEGWEDKYAIAG 126
Query: 260 VQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATK 319
P + D + K + + + + E V P I
Sbjct: 127 AYWPPQYVIMDGETLEPKKIQSTRGMTYDEQ-----EYHPEPRVAAILASHYRPEFIVNV 181
Query: 320 TPSSDVLVFDYT 331
+ +L+ DYT
Sbjct: 182 KETGKILLVDYT 193
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.3 bits (87), Expect = 0.001
Identities = 15/82 (18%), Positives = 32/82 (39%), Gaps = 10/82 (12%)
Query: 136 WNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNG 195
+++++SDD T+ LWD+ T + R + G VV + + + +
Sbjct: 265 CLQFNKNFVITSSDDGTVKLWDLK-TGEFIRNLVTLE-SGGSGGVV---WRIRASNT-KL 318
Query: 196 YLLSASDDHT----ICLWDINA 213
S + T + + D +
Sbjct: 319 VCAVGSRNGTEETKLLVLDFDV 340
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.9 bits (86), Expect = 0.001
Identities = 17/71 (23%), Positives = 27/71 (38%), Gaps = 12/71 (16%)
Query: 170 AKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTG 229
+ + GH V L + + ++S SDD+T+ +W T K R G
Sbjct: 8 SPKVLKGHDD--HVITCLQFCGN---RIVSGSDDNTLKVWSAV-TGKCLRT------LVG 55
Query: 230 HTAVVEDYSIH 240
HT V +
Sbjct: 56 HTGGVWSSQMR 66
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Score = 37.8 bits (86), Expect = 0.001
Identities = 10/108 (9%), Positives = 30/108 (27%), Gaps = 11/108 (10%)
Query: 133 GLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPS 192
G + + Y++ + + + + D + V + + P
Sbjct: 1 GPALKAG-HEYMIVTNYPNNLHVVD----VASDTVYKSCVMPDKFGP-----GTAMMAPD 50
Query: 193 LNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIH 240
+ + I D+ T K + ++ + ++I
Sbjct: 51 NRTAYVLNNHYGDIYGIDL-DTCKNTFHANLSSVPGEVGRSMYSFAIS 97
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 36.8 bits (83), Expect = 0.003
Identities = 12/88 (13%), Positives = 28/88 (31%), Gaps = 18/88 (20%)
Query: 136 WNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNG 195
+ Y A + + +D+ T K T + L + +
Sbjct: 283 VHGEFAAYYQGAPEKGVLLKYDV-KTRKV----------TEVKNNL---TDLRLSA--DR 326
Query: 196 -YLLSASDDHTICLWDINATPKENRVID 222
++ DD I + + P++ R ++
Sbjct: 327 KTVMVRKDDGKIYTFPLE-KPEDERTVE 353
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 368 | |||
| d1vyhc1 | 317 | Platelet-activating factor acetylhydrolase IB subu | 99.97 | |
| d1gxra_ | 337 | Groucho/tle1, C-terminal domain {Human (Homo sapie | 99.97 | |
| d1erja_ | 388 | Tup1, C-terminal domain {Baker's yeast (Saccharomy | 99.97 | |
| d1nr0a1 | 311 | Actin interacting protein 1 {Nematode (Caenorhabdi | 99.96 | |
| d1k8kc_ | 371 | Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur | 99.96 | |
| d1nr0a1 | 311 | Actin interacting protein 1 {Nematode (Caenorhabdi | 99.96 | |
| d1gxra_ | 337 | Groucho/tle1, C-terminal domain {Human (Homo sapie | 99.96 | |
| d1k8kc_ | 371 | Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur | 99.95 | |
| d1erja_ | 388 | Tup1, C-terminal domain {Baker's yeast (Saccharomy | 99.95 | |
| d1vyhc1 | 317 | Platelet-activating factor acetylhydrolase IB subu | 99.94 | |
| d1tbga_ | 340 | beta1-subunit of the signal-transducing G protein | 99.94 | |
| d1nr0a2 | 299 | Actin interacting protein 1 {Nematode (Caenorhabdi | 99.94 | |
| d1sq9a_ | 393 | Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac | 99.93 | |
| d1nexb2 | 355 | Cdc4 propeller domain {Baker's yeast (Saccharomyce | 99.93 | |
| d1tbga_ | 340 | beta1-subunit of the signal-transducing G protein | 99.93 | |
| d1pgua1 | 325 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.93 | |
| d1pgua1 | 325 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.92 | |
| d1nr0a2 | 299 | Actin interacting protein 1 {Nematode (Caenorhabdi | 99.91 | |
| d1yfqa_ | 342 | Cell cycle arrest protein BUB3 {Baker's yeast (Sac | 99.9 | |
| d1pgua2 | 287 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.89 | |
| d2ovrb2 | 342 | F-box/WD repeat-containing protein 7, FBXW7 {Human | 99.89 | |
| d1p22a2 | 293 | F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom | 99.87 | |
| d1p22a2 | 293 | F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom | 99.87 | |
| d1nexb2 | 355 | Cdc4 propeller domain {Baker's yeast (Saccharomyce | 99.86 | |
| d1k32a3 | 360 | Tricorn protease domain 2 {Archaeon Thermoplasma a | 99.86 | |
| d1pgua2 | 287 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.85 | |
| d2ovrb2 | 342 | F-box/WD repeat-containing protein 7, FBXW7 {Human | 99.83 | |
| d1sq9a_ | 393 | Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac | 99.83 | |
| d1yfqa_ | 342 | Cell cycle arrest protein BUB3 {Baker's yeast (Sac | 99.8 | |
| d1k32a3 | 360 | Tricorn protease domain 2 {Archaeon Thermoplasma a | 99.74 | |
| d1l0qa2 | 301 | Surface layer protein {Archaeon Methanosarcina maz | 99.73 | |
| d1hzua2 | 426 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.72 | |
| d1qksa2 | 432 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.61 | |
| d1hzua2 | 426 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.61 | |
| d1qksa2 | 432 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.55 | |
| d1l0qa2 | 301 | Surface layer protein {Archaeon Methanosarcina maz | 99.55 | |
| d1pbyb_ | 337 | Quinohemoprotein amine dehydrogenase B chain {Para | 99.53 | |
| d1ri6a_ | 333 | Putative isomerase YbhE {Escherichia coli [TaxId: | 99.48 | |
| d2madh_ | 373 | Methylamine dehydrogenase, H-chain {Gram negative | 99.46 | |
| d1ri6a_ | 333 | Putative isomerase YbhE {Escherichia coli [TaxId: | 99.44 | |
| d1jmxb_ | 346 | Quinohemoprotein amine dehydrogenase B chain {Pseu | 99.41 | |
| d1pbyb_ | 337 | Quinohemoprotein amine dehydrogenase B chain {Para | 99.32 | |
| d2bbkh_ | 355 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.15 | |
| d2madh_ | 373 | Methylamine dehydrogenase, H-chain {Gram negative | 98.98 | |
| d1jmxb_ | 346 | Quinohemoprotein amine dehydrogenase B chain {Pseu | 98.82 | |
| d1mdah_ | 368 | Methylamine dehydrogenase, H-chain {Paracoccus den | 98.81 | |
| d2bbkh_ | 355 | Methylamine dehydrogenase, H-chain {Paracoccus den | 98.63 | |
| d2bgra1 | 470 | Dipeptidyl peptidase IV/CD26, N-terminal domain {P | 98.59 | |
| d2hqsa1 | 269 | TolB, C-terminal domain {Escherichia coli [TaxId: | 98.48 | |
| d2bgra1 | 470 | Dipeptidyl peptidase IV/CD26, N-terminal domain {P | 98.48 | |
| d1mdah_ | 368 | Methylamine dehydrogenase, H-chain {Paracoccus den | 98.24 | |
| d1qnia2 | 441 | Nitrous oxide reductase, N-terminal domain {Pseudo | 98.21 | |
| d1rwia_ | 260 | Serine/threonine-protein kinase PknD {Mycobacteriu | 97.88 | |
| d1q7fa_ | 279 | Brain tumor cg10719-pa {Fruit fly (Drosophila mela | 97.78 | |
| d1pjxa_ | 314 | Diisopropylfluorophosphatase (phosphotriesterase, | 97.78 | |
| d2p4oa1 | 302 | Hypothetical protein All0351 homologue {Nostoc pun | 97.78 | |
| d2hqsa1 | 269 | TolB, C-terminal domain {Escherichia coli [TaxId: | 97.76 | |
| d1jofa_ | 365 | 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu | 97.69 | |
| d1qnia2 | 441 | Nitrous oxide reductase, N-terminal domain {Pseudo | 97.62 | |
| d1rwia_ | 260 | Serine/threonine-protein kinase PknD {Mycobacteriu | 97.3 | |
| d2dg1a1 | 319 | Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 | 97.11 | |
| d1pjxa_ | 314 | Diisopropylfluorophosphatase (phosphotriesterase, | 97.08 | |
| d2p4oa1 | 302 | Hypothetical protein All0351 homologue {Nostoc pun | 96.95 | |
| d2dg1a1 | 319 | Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 | 96.9 | |
| d1xfda1 | 465 | Dipeptidyl aminopeptidase-like protein 6, DPP6, N- | 96.8 | |
| d1jofa_ | 365 | 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu | 96.5 | |
| d1xfda1 | 465 | Dipeptidyl aminopeptidase-like protein 6, DPP6, N- | 96.09 | |
| d1q7fa_ | 279 | Brain tumor cg10719-pa {Fruit fly (Drosophila mela | 96.0 | |
| d2ghsa1 | 295 | Regucalcin {Agrobacterium tumefaciens [TaxId: 358] | 95.37 | |
| d2ghsa1 | 295 | Regucalcin {Agrobacterium tumefaciens [TaxId: 358] | 93.01 | |
| d1k32a2 | 281 | Tricorn protease N-terminal domain {Archaeon Therm | 92.29 | |
| d1ijqa1 | 266 | Low density lipoprotein (LDL) receptor {Human (Hom | 90.07 | |
| d1k32a2 | 281 | Tricorn protease N-terminal domain {Archaeon Therm | 90.0 | |
| d1npea_ | 263 | Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | 87.62 |
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.97 E-value=2.1e-30 Score=224.03 Aligned_cols=297 Identities=16% Similarity=0.185 Sum_probs=215.6
Q ss_pred hhhhhcCcchheeecccccccCceeeEecCCcccccCCCCccccccCcceeeeccccCCC-CCcEEEEEEecCCCccccc
Q psy4579 21 KIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDE-QNHLLIASVQLPNEDAQFD 99 (368)
Q Consensus 21 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~ 99 (368)
|.|....|..+ .+. -+.-+|.+++|+|++++|++|+.||.|++|+.. .+...... .....|.++.+.+....+.
T Consensus 1 k~w~p~~~~~~-~L~--GH~~~I~~l~~sp~~~~l~s~s~Dg~i~iWd~~--~~~~~~~~~~h~~~V~~~~~~~~~~~~~ 75 (317)
T d1vyhc1 1 KEWIPRPPEKY-ALS--GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYE--TGDFERTLKGHTDSVQDISFDHSGKLLA 75 (317)
T ss_dssp CCCCCCSSCSC-EEE--CCSSCEEEEEECSSSSEEEEEESSSCEEEEETT--TCCCCEEECCCSSCEEEEEECTTSSEEE
T ss_pred CccCCCCCccE-EEc--CCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECC--CCCEEEEEeCCCCcEEEEeeeccccccc
Confidence 56766655544 232 246699999999999999999999999777654 33332221 1223467777765544333
Q ss_pred cCCcccCCCCcccCCCCCe-eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccc
Q psy4579 100 ASNYDTDKGGNVQLPNEDA-QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHT 178 (368)
Q Consensus 100 ~~~~~~~~~g~i~i~~~~~-~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~ 178 (368)
.. ..++.+..|+... ........|...+.++.|+|++ ..+++++.|+.+++||++++. ....+.+|.
T Consensus 76 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~-------~~~~~~~~~ 143 (317)
T d1vyhc1 76 SC----SADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNG-DHIVSASRDKTIKMWEVQTGY-------CVKTFTGHR 143 (317)
T ss_dssp EE----ETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSS-SEEEEEETTSEEEEEETTTCC-------EEEEEECCS
T ss_pred cc----ccccccccccccccccccccccccccceeeeccCCC-ceEEeeccCcceeEeecccce-------eeeEEccCC
Confidence 22 2456677776543 4555677899999999999998 899999999999999998874 467888999
Q ss_pred cceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeeec--ccccCCCCccceE
Q psy4579 179 AVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLI--LGTHTSDEQNHLL 256 (368)
Q Consensus 179 ~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~--~~~~~~d~~~~~~ 256 (368)
..+. +++|+|+ +.+|++++.|+.|++|++++. .+...+.+|...+.+++|.+.. .............
T Consensus 144 ~~~~---~~~~~~~-~~~l~~~~~d~~v~~~~~~~~-------~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 212 (317)
T d1vyhc1 144 EWVR---MVRPNQD-GTLIASCSNDQTVRVWVVATK-------ECKAELREHRHVVECISWAPESSYSSISEATGSETKK 212 (317)
T ss_dssp SCEE---EEEECTT-SSEEEEEETTSCEEEEETTTC-------CEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC---
T ss_pred Ccce---eeecccC-CCEEEEEeCCCeEEEEeeccc-------eeeEEEecCCCCceEEEEeeccccceeeccccceeee
Confidence 8885 9999998 999999999999999999887 4567788899999999997621 1111111111110
Q ss_pred EEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCC
Q psy4579 257 IASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSK 336 (368)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~ 336 (368)
.. .....+... ...+.+.+|+..+++....+. +|...|.+++|+|++ .+|++|+.||.|++||++.
T Consensus 213 ~~-----~~~~~~~~~---~~d~~i~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~~---- 278 (317)
T d1vyhc1 213 SG-----KPGPFLLSG---SRDKTIKMWDVSTGMCLMTLV-GHDNWVRGVLFHSGG-KFILSCADDKTLRVWDYKN---- 278 (317)
T ss_dssp ---------CCEEEEE---ETTSEEEEEETTTTEEEEEEE-CCSSCEEEEEECSSS-SCEEEEETTTEEEEECCTT----
T ss_pred ec-----cCCceeEec---cCCCEEEEEECCCCcEEEEEe-CCCCCEEEEEECCCC-CEEEEEECCCeEEEEECCC----
Confidence 00 000111111 123456777888888777776 899999999999999 6788999999999999975
Q ss_pred CCCCCCCCCceeeecccCceeeecceeee
Q psy4579 337 PDPNGECHPDLRLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 337 ~~~~~~~~~~~~~~gh~~~V~~l~w~p~~ 365 (368)
..++..+.+|.+.|++++|+|+.
T Consensus 279 ------~~~~~~~~~h~~~V~~~~~s~~~ 301 (317)
T d1vyhc1 279 ------KRCMKTLNAHEHFVTSLDFHKTA 301 (317)
T ss_dssp ------SCCCEEEECCSSCEEEEEECSSS
T ss_pred ------CcEEEEEcCCCCCEEEEEEcCCC
Confidence 45667889999999999999975
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=8.9e-30 Score=224.09 Aligned_cols=265 Identities=11% Similarity=0.045 Sum_probs=195.8
Q ss_pred ecccccccCceeeEecCCcccccCCCCccccccCcceeeeccccC----CCCCcEEEEEEecCCCccccccCCcccCCCC
Q psy4579 34 VMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTS----DEQNHLLIASVQLPNEDAQFDASNYDTDKGG 109 (368)
Q Consensus 34 ~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g 109 (368)
+.+-.+..+|.+++|+|++++|++|+ ||.|++|+.......... .......|.++.|.+++..+..+ +.||
T Consensus 45 ~~~~~H~~~V~~v~fs~~g~~latg~-dg~V~iWd~~~~~~~~~~~~~~~~~h~~~I~~v~~s~dg~~l~s~----~~dg 119 (337)
T d1gxra_ 45 INTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVG----GEAS 119 (337)
T ss_dssp EEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEE----ESSS
T ss_pred EEECCCCCcEEEEEECCCCCEEEEEE-CCEEEEEEccCCcccceeEEeeecCCCCcEEEEEEcCCCCEEEEe----eccc
Confidence 33334567899999999999999987 788877754322111111 11223358888886665544333 3589
Q ss_pred cccCCCCCe---eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceeccee
Q psy4579 110 NVQLPNEDA---QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYG 186 (368)
Q Consensus 110 ~i~i~~~~~---~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 186 (368)
.|++|+... .....+..|...|.+++|+|++ .++++++.|+.|++|++.++. +.....+|...+. +
T Consensus 120 ~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~d~~i~~~~~~~~~-------~~~~~~~~~~~v~---~ 188 (337)
T d1gxra_ 120 TLSIWDLAAPTPRIKAELTSSAPACYALAISPDS-KVCFSCCSDGNIAVWDLHNQT-------LVRQFQGHTDGAS---C 188 (337)
T ss_dssp EEEEEECCCC--EEEEEEECSSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTTE-------EEEEECCCSSCEE---E
T ss_pred cccccccccccccccccccccccccccccccccc-ccccccccccccccccccccc-------ccccccccccccc---c
Confidence 999999753 4455667899999999999998 999999999999999998764 4577788999996 9
Q ss_pred eEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee--ecccccCCCCccceEEEEeecCC
Q psy4579 187 LSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LILGTHTSDEQNHLLIASVQLPN 264 (368)
Q Consensus 187 i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~d~~~~~~~~~~~~~~ 264 (368)
++|+++ +..+++|+.|+.|++||++++ ..+..+ .|...|.+++|++ ..+.+++.++.
T Consensus 189 l~~s~~-~~~~~~~~~d~~v~i~d~~~~-------~~~~~~-~~~~~i~~l~~~~~~~~l~~~~~d~~------------ 247 (337)
T d1gxra_ 189 IDISND-GTKLWTGGLDNTVRSWDLREG-------RQLQQH-DFTSQIFSLGYCPTGEWLAVGMESSN------------ 247 (337)
T ss_dssp EEECTT-SSEEEEEETTSEEEEEETTTT-------EEEEEE-ECSSCEEEEEECTTSSEEEEEETTSC------------
T ss_pred cccccc-ccccccccccccccccccccc-------eeeccc-ccccceEEEEEcccccccceeccccc------------
Confidence 999998 899999999999999999886 233333 4788899999975 23333333333
Q ss_pred cccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCC
Q psy4579 265 EDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECH 344 (368)
Q Consensus 265 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~ 344 (368)
+.+|+..++... .. ..|...|++++|+|++ .+|++|+.||.|++||+.. ..
T Consensus 248 ----------------i~i~d~~~~~~~-~~-~~~~~~i~~v~~s~~g-~~l~s~s~Dg~i~iwd~~~----------~~ 298 (337)
T d1gxra_ 248 ----------------VEVLHVNKPDKY-QL-HLHESCVLSLKFAYCG-KWFVSTGKDNLLNAWRTPY----------GA 298 (337)
T ss_dssp ----------------EEEEETTSSCEE-EE-CCCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTT----------CC
T ss_pred ----------------cccccccccccc-cc-cccccccceEEECCCC-CEEEEEeCCCeEEEEECCC----------CC
Confidence 333344344433 22 3799999999999999 6888999999999999975 23
Q ss_pred CceeeecccCceeeecceeee
Q psy4579 345 PDLRLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 345 ~~~~~~gh~~~V~~l~w~p~~ 365 (368)
++ ...+|.+.|.+++|+|+.
T Consensus 299 ~~-~~~~~~~~v~~~~~s~d~ 318 (337)
T d1gxra_ 299 SI-FQSKESSSVLSCDISVDD 318 (337)
T ss_dssp EE-EEEECSSCEEEEEECTTS
T ss_pred EE-EEccCCCCEEEEEEeCCC
Confidence 33 335789999999999864
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.97 E-value=9.2e-30 Score=227.69 Aligned_cols=301 Identities=17% Similarity=0.190 Sum_probs=206.8
Q ss_pred hhhhhhhhhhcCcchheeecc--cccccCceeeEecCCcccccCCCCccccccCcceeeeccccCC--------------
Q psy4579 16 INEEYKIWKKNTPFLYDLVMT--HALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSD-------------- 79 (368)
Q Consensus 16 ~~~~~~~w~~~~~~~~~~~~~--~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-------------- 79 (368)
.+..+.+|+...+..++.-.. ..+.-+|.|++|+|||++|++|+ |+.+++|+.. .+.....
T Consensus 36 ~~~~~~~~~~~~~~~~~~~l~~~~~H~~~V~~l~fs~dg~~lasg~-d~~i~iW~~~--~~~~~~~~~~~~~~~~~~~~~ 112 (388)
T d1erja_ 36 TNDYYILYNPALPREIDVELHKSLDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVS--DGSLVARLSDDSAANKDPENL 112 (388)
T ss_dssp CSSCEEEECTTSCCCEEEEEEEEEECSSCCCEEEECTTSSEEEEEC-BSCEEEEETT--TCCEEEEECC-----------
T ss_pred CCCcEEEeCCCCCcceeeeeEeeCCCCCcEEEEEECCCCCEEEEEe-CCeEEEEEec--ccceEeeeccccccccccccc
Confidence 445667788777765543322 23567899999999999999987 7888666543 2221110
Q ss_pred -----CCCcEEEEEEecCCCccccccCCcccCCCCcccCCCCCe-eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcE
Q psy4579 80 -----EQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDA-QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTI 153 (368)
Q Consensus 80 -----~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~-~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v 153 (368)
......|.++.|.+++..+..+ +.||.|++|+... +......+|...|.+++|++++ ..+++|+.++.+
T Consensus 113 ~~~~~~~~~~~V~~l~~s~~~~~l~s~----~~dg~v~i~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~~~~~~~~~~i 187 (388)
T d1erja_ 113 NTSSSPSSDLYIRSVCFSPDGKFLATG----AEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSG-DKLVSGSGDRTV 187 (388)
T ss_dssp ------CCCCBEEEEEECTTSSEEEEE----ETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTS-SEEEEEETTSEE
T ss_pred ccccccCCCCCEEEEEECCCCCcceec----cccccccccccccccccccccccccccccccccccc-ccccccccceee
Confidence 1123347778886654443332 3689999999764 5566677899999999999998 899999999999
Q ss_pred EEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeeccccc
Q psy4579 154 CLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAV 233 (368)
Q Consensus 154 ~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 233 (368)
++||..+.. .......+...+ ++.+++.++.+|++|+.||.|++||++++.....+........+|...
T Consensus 188 ~~~d~~~~~-------~~~~~~~~~~~~----~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~h~~~ 256 (388)
T d1erja_ 188 RIWDLRTGQ-------CSLTLSIEDGVT----TVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDS 256 (388)
T ss_dssp EEEETTTTE-------EEEEEECSSCEE----EEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSC
T ss_pred eeeeccccc-------cccccccccccc----cccccCCCCCeEEEEcCCCeEEEeecccCccceeeccccccccCCCCC
Confidence 999998763 334444455444 777777658999999999999999998875433222223344578899
Q ss_pred EeEEEEee--ecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCC
Q psy4579 234 VEDYSIHR--LILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQ 311 (368)
Q Consensus 234 v~~v~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~ 311 (368)
|.+++|++ ..+.+++.|+.+++|........ . .......+....... .|...|.+++|+|+
T Consensus 257 v~~l~~s~~~~~l~s~~~d~~i~iwd~~~~~~~----~------------~~~~~~~~~~~~~~~-~~~~~v~~~~~s~~ 319 (388)
T d1erja_ 257 VYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNK----S------------DSKTPNSGTCEVTYI-GHKDFVLSVATTQN 319 (388)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEEC-------------------------------CEEEEEE-CCSSCEEEEEECGG
T ss_pred EEEEEECCCCCEEEEEECCCcEEEEeccCCccc----c------------ccccccccceeeecc-cccceEEEEEECCC
Confidence 99999986 45667777777766643311000 0 000011122233333 79999999999999
Q ss_pred CCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeecccCceeeeccee
Q psy4579 312 NPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYN 363 (368)
Q Consensus 312 ~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p 363 (368)
+ .+|++|+.||+|++||++. ..++..+.+|.+.|++++|.+
T Consensus 320 ~-~~l~sg~~dg~i~vwd~~~----------~~~~~~l~~H~~~V~~~~~~~ 360 (388)
T d1erja_ 320 D-EYILSGSKDRGVLFWDKKS----------GNPLLMLQGHRNSVISVAVAN 360 (388)
T ss_dssp G-CEEEEEETTSEEEEEETTT----------CCEEEEEECCSSCEEEEEECS
T ss_pred C-CEEEEEeCCCEEEEEECCC----------CcEEEEEeCCCCCEEEEEEec
Confidence 9 6788999999999999975 566778999999999987643
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.96 E-value=1.4e-29 Score=220.41 Aligned_cols=269 Identities=12% Similarity=0.080 Sum_probs=185.5
Q ss_pred hhhhhhhcCcchheeecccccccCceeeEecCCcccccCCCCccccccCcceeeeccccCCCC-CcEEEEEEecCCCccc
Q psy4579 19 EYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQ-NHLLIASVQLPNEDAQ 97 (368)
Q Consensus 19 ~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~ 97 (368)
...+|..+.+.....+.. +..++.+++|+|++++|++|+.||.+++|+............+ ....|.++.|.+++..
T Consensus 39 ~v~i~~~~~~~~~~~~~~--H~~~v~~~~~sp~g~~latg~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~v~~s~d~~~ 116 (311)
T d1nr0a1 39 SVYTVPVGSLTDTEIYTE--HSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKR 116 (311)
T ss_dssp EEEEEETTCSSCCEEECC--CSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCE
T ss_pred EEEEEECCCCceeEEEcC--CCCCEEEEEEeCCCCeEeccccCceEeeeeeeccccccccccccccCccccccccccccc
Confidence 355677776665555433 4568999999999999999999999977754433211111111 1234778888666555
Q ss_pred cccCCcccCCCCcccCCCCCe-eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeec
Q psy4579 98 FDASNYDTDKGGNVQLPNEDA-QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTG 176 (368)
Q Consensus 98 ~~~~~~~~~~~g~i~i~~~~~-~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~ 176 (368)
+.+.+. +.+..+++|+.+. +....+.+|.+.|++++|+|+++..|++|+.||.|++||+++.. ....+.+
T Consensus 117 l~~~~~--~~~~~~~v~~~~~~~~~~~l~~h~~~v~~v~~~~~~~~~l~sgs~d~~i~i~d~~~~~-------~~~~~~~ 187 (311)
T d1nr0a1 117 IAAVGE--GRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFK-------FKSTFGE 187 (311)
T ss_dssp EEEEEC--CSSCSEEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBE-------EEEEECC
T ss_pred cccccc--cccccccccccccccccccccccccccccccccccceeeecccccccccccccccccc-------ccccccc
Confidence 544331 2355677777664 45566788999999999999985568999999999999998763 5677889
Q ss_pred cccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee--ecccccCCCCccc
Q psy4579 177 HTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LILGTHTSDEQNH 254 (368)
Q Consensus 177 h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~d~~~~ 254 (368)
|..+|. ++.|+|+ +++|++|+.||.|++||++.+..............+|...|++++|++ ..+.+++.|+.
T Consensus 188 ~~~~i~---~v~~~p~-~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~tgs~Dg~-- 261 (311)
T d1nr0a1 188 HTKFVH---SVRYNPD-GSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKT-- 261 (311)
T ss_dssp CSSCEE---EEEECTT-SSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSE--
T ss_pred cccccc---ccccCcc-ccccccccccccccccccccccccccccccccccccccccccccccCCCCCEEEEEeCCCe--
Confidence 999996 9999998 999999999999999999886432211111223456889999999985 33444444433
Q ss_pred eEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECC
Q psy4579 255 LLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYT 331 (368)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~ 331 (368)
+.+|+..++++...+...+......+.+.+++ ..|++++.||.|++||+.
T Consensus 262 --------------------------v~iwd~~t~~~~~~l~~~~~~~~~~~~~~~~~-~~l~s~s~dG~i~~wd~d 311 (311)
T d1nr0a1 262 --------------------------IKIWNVATLKVEKTIPVGTRIEDQQLGIIWTK-QALVSISANGFINFVNPE 311 (311)
T ss_dssp --------------------------EEEEETTTTEEEEEEECCSSGGGCEEEEEECS-SCEEEEETTCCEEEEETT
T ss_pred --------------------------EEEEECCCCcEEEEEECCCCccceEEEEEecC-CEEEEEECCCEEEEEeCC
Confidence 34445556666665553222233334444555 346688999999999973
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.96 E-value=6.1e-29 Score=221.72 Aligned_cols=246 Identities=13% Similarity=0.140 Sum_probs=179.6
Q ss_pred cCceeeEecCCcccccCCCCccccccCcceeeeccccCCCCCcEEEEEEecCCCccccccCCcccCCCCcccCCCCCeee
Q psy4579 41 WPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQF 120 (368)
Q Consensus 41 ~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~ 120 (368)
-||.|++|+||+++||+|+.++.|.+|+. ..+ +...
T Consensus 8 ~pIt~~~~s~dg~~la~~~~~~~i~iw~~--~~~------------------------------------------~~~~ 43 (371)
T d1k8kc_ 8 EPISCHAWNKDRTQIAICPNNHEVHIYEK--SGN------------------------------------------KWVQ 43 (371)
T ss_dssp SCCCEEEECTTSSEEEEECSSSEEEEEEE--ETT------------------------------------------EEEE
T ss_pred CCeEEEEECCCCCEEEEEeCCCEEEEEEC--CCC------------------------------------------CEEE
Confidence 48999999999999998888887755532 100 0012
Q ss_pred eeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEe
Q psy4579 121 DASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSA 200 (368)
Q Consensus 121 ~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~ 200 (368)
...+.+|.++|++|+|+|++ ++|++|+.|++|++||+.+... .+...+.+|...+. +++|+|+ ++.|++|
T Consensus 44 ~~~l~gH~~~V~~l~fsp~~-~~l~s~s~D~~i~vWd~~~~~~-----~~~~~~~~~~~~v~---~i~~~p~-~~~l~~~ 113 (371)
T d1k8kc_ 44 VHELKEHNGQVTGVDWAPDS-NRIVTCGTDRNAYVWTLKGRTW-----KPTLVILRINRAAR---CVRWAPN-EKKFAVG 113 (371)
T ss_dssp EEEEECCSSCEEEEEEETTT-TEEEEEETTSCEEEEEEETTEE-----EEEEECCCCSSCEE---EEEECTT-SSEEEEE
T ss_pred EEEecCCCCCEEEEEECCCC-CEEEEEECCCeEEEEeeccccc-----cccccccccccccc---ccccccc-cccceee
Confidence 23445799999999999998 9999999999999999986532 13455678888886 9999999 9999999
Q ss_pred eCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee--ecccccCCCCccceEEEEeecCCcccccccccccCCC
Q psy4579 201 SDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDK 278 (368)
Q Consensus 201 s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 278 (368)
+.|++|++|++....... ........|...|.+++|+| ..+++++.|+.+++|..... ..........++.
T Consensus 114 s~d~~i~i~~~~~~~~~~---~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~D~~v~v~~~~~~--~~~~~~~~~~~~~-- 186 (371)
T d1k8kc_ 114 SGSRVISICYFEQENDWW---VCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIK--EVEERPAPTPWGS-- 186 (371)
T ss_dssp ETTSSEEEEEEETTTTEE---EEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCT--TTSCCCCCBTTBS--
T ss_pred cccCcceeeeeecccccc---cccccccccccccccccccccccceeccccCcEEEEEeeccC--ccccccccccccc--
Confidence 999999999987653211 12334556889999999986 46677777877777643321 1111111111111
Q ss_pred CCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeecccCceee
Q psy4579 279 GDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLI 358 (368)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~ 358 (368)
....+....... +|...|.+++|+|++ .+|++++.|++|++||+.. ...+..+.+|..+|.+
T Consensus 187 ------~~~~~~~~~~~~-~~~~~v~~~~~s~~g-~~l~s~~~d~~i~iwd~~~----------~~~~~~~~~~~~~v~s 248 (371)
T d1k8kc_ 187 ------KMPFGELMFESS-SSCGWVHGVCFSANG-SRVAWVSHDSTVCLADADK----------KMAVATLASETLPLLA 248 (371)
T ss_dssp ------CCCTTCEEEECC-CCSSCEEEEEECSSS-SEEEEEETTTEEEEEEGGG----------TTEEEEEECSSCCEEE
T ss_pred ------cccceeeeeecc-CccCcEEEEEeeccc-ccccccccCCcceEEeeec----------ccceeeeeccccccee
Confidence 111233344444 799999999999999 6788999999999999975 4556678899999999
Q ss_pred ecceeee
Q psy4579 359 EGTYNCY 365 (368)
Q Consensus 359 l~w~p~~ 365 (368)
++|+|+.
T Consensus 249 ~~fs~d~ 255 (371)
T d1k8kc_ 249 VTFITES 255 (371)
T ss_dssp EEEEETT
T ss_pred eeecCCC
Confidence 9999864
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.96 E-value=1.3e-28 Score=214.09 Aligned_cols=262 Identities=15% Similarity=0.158 Sum_probs=186.1
Q ss_pred CceeeEecCCcccccCCCCccccccCcceeeeccccCCCCCcEEEEEEecCCCccccccCCcccCCCCcccCCCCCee--
Q psy4579 42 PSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQ-- 119 (368)
Q Consensus 42 ~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~-- 119 (368)
.+.+++++|+++.|++++.+ .+.+|+.+.....+.... ....|.++.|.+++..+ +.+ +.||+|++|+....
T Consensus 19 ~~~~~a~~~~g~~l~~~~~~-~v~i~~~~~~~~~~~~~~-H~~~v~~~~~sp~g~~l-atg---~~dg~i~iwd~~~~~~ 92 (311)
T d1nr0a1 19 TAVVLGNTPAGDKIQYCNGT-SVYTVPVGSLTDTEIYTE-HSHQTTVAKTSPSGYYC-ASG---DVHGNVRIWDTTQTTH 92 (311)
T ss_dssp CCCCCEECTTSSEEEEEETT-EEEEEETTCSSCCEEECC-CSSCEEEEEECTTSSEE-EEE---ETTSEEEEEESSSTTC
T ss_pred CeEEEEEcCCCCEEEEEeCC-EEEEEECCCCceeEEEcC-CCCCEEEEEEeCCCCeE-ecc---ccCceEeeeeeecccc
Confidence 45578999999999998544 454443322211222221 12358888886655444 333 35899999998653
Q ss_pred -eeeccccCCCCceeeEecCCCCCeeEEEeC--CCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCe
Q psy4579 120 -FDASNYDTDKGGYGLSWNPSLNGYLLSASD--DHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGY 196 (368)
Q Consensus 120 -~~~~~~~h~~~v~~l~~sp~~~~~lasg~~--dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~ 196 (368)
....+..|.++|.+++|+|++ ++|++++. +..+++|+++++. +...+.+|...|. +++|+|++..+
T Consensus 93 ~~~~~~~~~~~~v~~v~~s~d~-~~l~~~~~~~~~~~~v~~~~~~~-------~~~~l~~h~~~v~---~v~~~~~~~~~ 161 (311)
T d1nr0a1 93 ILKTTIPVFSGPVKDISWDSES-KRIAAVGEGRERFGHVFLFDTGT-------SNGNLTGQARAMN---SVDFKPSRPFR 161 (311)
T ss_dssp CEEEEEECSSSCEEEEEECTTS-CEEEEEECCSSCSEEEEETTTCC-------BCBCCCCCSSCEE---EEEECSSSSCE
T ss_pred ccccccccccCccccccccccc-ccccccccccccccccccccccc-------ccccccccccccc---cccccccceee
Confidence 234467799999999999998 88888875 4669999998764 4577889999996 99999984446
Q ss_pred EEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee--ecccccCCCCccceEEEEeecCCcccccccccc
Q psy4579 197 LLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LILGTHTSDEQNHLLIASVQLPNEDAQFDASNY 274 (368)
Q Consensus 197 l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 274 (368)
|++|+.||.|++||+++. .....+.+|...|+++.|+| ..+.+++.|+.+.+|..
T Consensus 162 l~sgs~d~~i~i~d~~~~-------~~~~~~~~~~~~i~~v~~~p~~~~l~~~~~d~~v~~~d~---------------- 218 (311)
T d1nr0a1 162 IISGSDDNTVAIFEGPPF-------KFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNG---------------- 218 (311)
T ss_dssp EEEEETTSCEEEEETTTB-------EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEET----------------
T ss_pred eccccccccccccccccc-------ccccccccccccccccccCcccccccccccccccccccc----------------
Confidence 899999999999999886 45677888999999999986 34555555555555432
Q ss_pred cCCCCCcccccCCCCceeee------eecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCcee
Q psy4579 275 DTDKGDFGGFGSVSGKIEIE------IKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLR 348 (368)
Q Consensus 275 d~~~~~~~~~~~~~~~~~~~------~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~ 348 (368)
.++..... ...+|.+.|++++|+|++ .+|+||+.||+|+|||+++ ...+..
T Consensus 219 ------------~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~~-~~l~tgs~Dg~v~iwd~~t----------~~~~~~ 275 (311)
T d1nr0a1 219 ------------VDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDG-TKIASASADKTIKIWNVAT----------LKVEKT 275 (311)
T ss_dssp ------------TTCCEEEECBCTTSSSCSSSSCEEEEEECTTS-SEEEEEETTSEEEEEETTT----------TEEEEE
T ss_pred ------------ccccccccccccccccccccccccccccCCCC-CEEEEEeCCCeEEEEECCC----------CcEEEE
Confidence 11111111 113799999999999999 6888999999999999975 333445
Q ss_pred eeccc---Cceeeecceeeee
Q psy4579 349 LRGHQ---KEGLIEGTYNCYL 366 (368)
Q Consensus 349 ~~gh~---~~V~~l~w~p~~~ 366 (368)
+..|. ..+.++.|++.++
T Consensus 276 l~~~~~~~~~~~~~~~~~~~l 296 (311)
T d1nr0a1 276 IPVGTRIEDQQLGIIWTKQAL 296 (311)
T ss_dssp EECCSSGGGCEEEEEECSSCE
T ss_pred EECCCCccceEEEEEecCCEE
Confidence 55443 4566788877653
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=1.3e-28 Score=216.48 Aligned_cols=258 Identities=12% Similarity=0.122 Sum_probs=186.7
Q ss_pred hhhhhhhhhcCcc---hheeecccccccCceeeEecCCcccccCCCCccccccCcceeeeccccCC-CCCcEEEEEEecC
Q psy4579 17 NEEYKIWKKNTPF---LYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSD-EQNHLLIASVQLP 92 (368)
Q Consensus 17 ~~~~~~w~~~~~~---~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~ 92 (368)
+...++|+...+. ....+......-+|.+++|+||+++|++++.|+.+.+|+.....+..... ......+..+.+.
T Consensus 71 dg~V~iWd~~~~~~~~~~~~~~~~~h~~~I~~v~~s~dg~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~ 150 (337)
T d1gxra_ 71 KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAIS 150 (337)
T ss_dssp BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEEC
T ss_pred CCEEEEEEccCCcccceeEEeeecCCCCcEEEEEEcCCCCEEEEeecccccccccccccccccccccccccccccccccc
Confidence 3457889876543 22333334456689999999999999999999999777654333322222 1112235555564
Q ss_pred CCccccccCCcccCCCCcccCCCCCe-eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccc
Q psy4579 93 NEDAQFDASNYDTDKGGNVQLPNEDA-QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAK 171 (368)
Q Consensus 93 ~~~~~~~~~~~~~~~~g~i~i~~~~~-~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~ 171 (368)
+....+. +. +.++.|++|+... +.......|...|++++|++++ ..+++|+.||.|++||+++++ .+
T Consensus 151 ~~~~~l~-s~---~~d~~i~~~~~~~~~~~~~~~~~~~~v~~l~~s~~~-~~~~~~~~d~~v~i~d~~~~~-------~~ 218 (337)
T d1gxra_ 151 PDSKVCF-SC---CSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDG-TKLWTGGLDNTVRSWDLREGR-------QL 218 (337)
T ss_dssp TTSSEEE-EE---ETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTTE-------EE
T ss_pred ccccccc-cc---cccccccccccccccccccccccccccccccccccc-cccccccccccccccccccce-------ee
Confidence 4433332 22 3588999999764 5556677899999999999998 899999999999999998763 23
Q ss_pred eeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee--ecccccCC
Q psy4579 172 TIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LILGTHTS 249 (368)
Q Consensus 172 ~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~ 249 (368)
. ...|...+. +++|+|+ +.+|++|+.|+.+++||++... ......|...|++++|++ ..+.+++.
T Consensus 219 ~-~~~~~~~i~---~l~~~~~-~~~l~~~~~d~~i~i~d~~~~~--------~~~~~~~~~~i~~v~~s~~g~~l~s~s~ 285 (337)
T d1gxra_ 219 Q-QHDFTSQIF---SLGYCPT-GEWLAVGMESSNVEVLHVNKPD--------KYQLHLHESCVLSLKFAYCGKWFVSTGK 285 (337)
T ss_dssp E-EEECSSCEE---EEEECTT-SSEEEEEETTSCEEEEETTSSC--------EEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred c-ccccccceE---EEEEccc-ccccceeccccccccccccccc--------cccccccccccceEEECCCCCEEEEEeC
Confidence 3 335778885 9999998 8999999999999999998763 234567899999999986 23334443
Q ss_pred CCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEE
Q psy4579 250 DEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFD 329 (368)
Q Consensus 250 d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd 329 (368)
|+. +.+|+..+++..... .|...|.+++|+|++ .+|+||+.||+|+|||
T Consensus 286 Dg~----------------------------i~iwd~~~~~~~~~~--~~~~~v~~~~~s~d~-~~l~t~s~D~~I~vWd 334 (337)
T d1gxra_ 286 DNL----------------------------LNAWRTPYGASIFQS--KESSSVLSCDISVDD-KYIVTGSGDKKATVYE 334 (337)
T ss_dssp TSE----------------------------EEEEETTTCCEEEEE--ECSSCEEEEEECTTS-CEEEEEETTSCEEEEE
T ss_pred CCe----------------------------EEEEECCCCCEEEEc--cCCCCEEEEEEeCCC-CEEEEEeCCCeEEEEE
Confidence 333 333444455555443 588999999999999 6788999999999999
Q ss_pred C
Q psy4579 330 Y 330 (368)
Q Consensus 330 ~ 330 (368)
+
T Consensus 335 l 335 (337)
T d1gxra_ 335 V 335 (337)
T ss_dssp E
T ss_pred E
Confidence 7
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.95 E-value=1e-27 Score=213.74 Aligned_cols=295 Identities=13% Similarity=0.131 Sum_probs=193.1
Q ss_pred hhhhhhhhhcCcchheeecccccccCceeeEecCCcccccCCCCccccccCcceeeeccccCC-CCCcEEEEEEecCCCc
Q psy4579 17 NEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSD-EQNHLLIASVQLPNED 95 (368)
Q Consensus 17 ~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~ 95 (368)
+...++|+.+...+........+.-||.+++|+|++++|++++.|+.+++|+.+......... ......+.++.|.+.+
T Consensus 28 ~~~i~iw~~~~~~~~~~~~l~gH~~~V~~l~fsp~~~~l~s~s~D~~i~vWd~~~~~~~~~~~~~~~~~~v~~i~~~p~~ 107 (371)
T d1k8kc_ 28 NHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNE 107 (371)
T ss_dssp SSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTS
T ss_pred CCEEEEEECCCCCEEEEEEecCCCCCEEEEEECCCCCEEEEEECCCeEEEEeeccccccccccccccccccccccccccc
Confidence 345788988765422222223456799999999999999999999999877665433322222 2223457788886555
Q ss_pred cccccCCcccCCCCcccCCCCCe-----eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCc----
Q psy4579 96 AQFDASNYDTDKGGNVQLPNEDA-----QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENR---- 166 (368)
Q Consensus 96 ~~~~~~~~~~~~~g~i~i~~~~~-----~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~---- 166 (368)
..+... +.+|.+++|+.+. ........|...|.+++|+|++ .+||+|+.||+|++|++........
T Consensus 108 ~~l~~~----s~d~~i~i~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~-~~l~s~s~D~~v~v~~~~~~~~~~~~~~~ 182 (371)
T d1k8kc_ 108 KKFAVG----SGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNS-VLLAAGSCDFKCRIFSAYIKEVEERPAPT 182 (371)
T ss_dssp SEEEEE----ETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTS-SEEEEEETTSCEEEEECCCTTTSCCCCCB
T ss_pred ccceee----cccCcceeeeeecccccccccccccccccccccccccccc-cceeccccCcEEEEEeeccCccccccccc
Confidence 443332 3589999997543 2233456799999999999998 9999999999999999876432111
Q ss_pred -------ccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEE
Q psy4579 167 -------VIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSI 239 (368)
Q Consensus 167 -------~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~ 239 (368)
.........+|...+. +++|+|+ +++|++++.|+.|++||+.++ ..+..+..|..+|.+++|
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~v~---~~~~s~~-g~~l~s~~~d~~i~iwd~~~~-------~~~~~~~~~~~~v~s~~f 251 (371)
T d1k8kc_ 183 PWGSKMPFGELMFESSSSCGWVH---GVCFSAN-GSRVAWVSHDSTVCLADADKK-------MAVATLASETLPLLAVTF 251 (371)
T ss_dssp TTBSCCCTTCEEEECCCCSSCEE---EEEECSS-SSEEEEEETTTEEEEEEGGGT-------TEEEEEECSSCCEEEEEE
T ss_pred cccccccceeeeeeccCccCcEE---EEEeecc-cccccccccCCcceEEeeecc-------cceeeeecccccceeeee
Confidence 1123445667888885 9999998 899999999999999999876 456778889999999999
Q ss_pred ee--ecccccCCCCccceEEEEeecCCcccccccc-cccCCCC----C------cccccC---C--CCceeeeeecCccc
Q psy4579 240 HR--LILGTHTSDEQNHLLIASVQLPNEDAQFDAS-NYDTDKG----D------FGGFGS---V--SGKIEIEIKINHEG 301 (368)
Q Consensus 240 ~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~-~~d~~~~----~------~~~~~~---~--~~~~~~~~~~~h~~ 301 (368)
++ .+++++. |....+|.+.... ..+... ..+.... . +...+. . ...........|.+
T Consensus 252 s~d~~~la~g~-d~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~ 326 (371)
T d1k8kc_ 252 ITESSLVAAGH-DCFPVLFTYDSAA----GKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKN 326 (371)
T ss_dssp EETTEEEEEET-TSSCEEEEEETTT----TEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSS
T ss_pred cCCCCEEEEEc-CCceEEEEeeCCC----ceEEEeeeecCccccccccccceeeEecccceeEEeccccccceecccccC
Confidence 86 3444443 4555565443210 000000 0000000 0 000000 0 00111112226999
Q ss_pred ceeEEEEeCCCC---cEEEEecCCCeEEEEECCC
Q psy4579 302 EVNRARYMPQNP---CVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 302 ~i~~~~~~p~~~---~~lasgs~Dg~i~iwd~~~ 332 (368)
.|+++++.|.+. ..|+|+|.||.|+|||++.
T Consensus 327 ~I~~i~~~~~~~~~~~~~~T~g~Dg~v~iW~~~~ 360 (371)
T d1k8kc_ 327 SVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRS 360 (371)
T ss_dssp CEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHH
T ss_pred CEEEEEEeCCCCcceEEEEEEcCCCeEEEEeCCc
Confidence 999999988542 3688999999999999964
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.95 E-value=8.9e-28 Score=214.65 Aligned_cols=276 Identities=15% Similarity=0.173 Sum_probs=182.6
Q ss_pred hhhhhhhhhcCcchheeecc----------------cccccCceeeEecCCcccccCCCCccccccCcceeeeccccCCC
Q psy4579 17 NEEYKIWKKNTPFLYDLVMT----------------HALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDE 80 (368)
Q Consensus 17 ~~~~~~w~~~~~~~~~~~~~----------------~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (368)
++..++|+.....+...+.. ....-++.+++|+|++++|++|+.||.+++|+... +......
T Consensus 82 d~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~s~~~dg~v~i~~~~~--~~~~~~~ 159 (388)
T d1erja_ 82 NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIEN--RKIVMIL 159 (388)
T ss_dssp BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEEETTSCEEEEETTT--TEEEEEE
T ss_pred CCeEEEEEecccceEeeecccccccccccccccccccCCCCCEEEEEECCCCCcceecccccccccccccc--ccccccc
Confidence 45678888766554433322 22345689999999999999999999997665433 3222221
Q ss_pred C-CcEEEEEEecCCCccccccCCcccCCCCcccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCC
Q psy4579 81 Q-NHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDIN 159 (368)
Q Consensus 81 ~-~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~ 159 (368)
. ....|..+.+......+... +.+|.+++|+...........+.....++.+++..+.+|++|+.||.|++||+.
T Consensus 160 ~~h~~~v~~~~~~~~~~~~~~~----~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~ 235 (388)
T d1erja_ 160 QGHEQDIYSLDYFPSGDKLVSG----SGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSE 235 (388)
T ss_dssp CCCSSCEEEEEECTTSSEEEEE----ETTSEEEEEETTTTEEEEEEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETT
T ss_pred cccccccccccccccccccccc----ccceeeeeeeccccccccccccccccccccccCCCCCeEEEEcCCCeEEEeecc
Confidence 1 12235555564443333222 358999999988755555555556666666766444899999999999999998
Q ss_pred CCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCcc-----ccceeeeecccccE
Q psy4579 160 ATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRV-----IDAKTIFTGHTAVV 234 (368)
Q Consensus 160 ~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~-----~~~~~~~~~~~~~v 234 (368)
++..............+|...|. +++|+|+ +.+|++|+.||.|++||+++....... .........|...|
T Consensus 236 ~~~~~~~~~~~~~~~~~h~~~v~---~l~~s~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 311 (388)
T d1erja_ 236 TGFLVERLDSENESGTGHKDSVY---SVVFTRD-GQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFV 311 (388)
T ss_dssp TCCEEEEEC------CCCSSCEE---EEEECTT-SSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCE
T ss_pred cCccceeeccccccccCCCCCEE---EEEECCC-CCEEEEEECCCcEEEEeccCCccccccccccccceeeecccccceE
Confidence 76532222222334567888996 9999998 899999999999999999876432211 12234456688889
Q ss_pred eEEEEee--ecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEE----
Q psy4579 235 EDYSIHR--LILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARY---- 308 (368)
Q Consensus 235 ~~v~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~---- 308 (368)
.+++|++ ..+.+++.|+ .+.+|+..+++....+. +|.+.|.++++
T Consensus 312 ~~~~~s~~~~~l~sg~~dg----------------------------~i~vwd~~~~~~~~~l~-~H~~~V~~~~~~~~~ 362 (388)
T d1erja_ 312 LSVATTQNDEYILSGSKDR----------------------------GVLFWDKKSGNPLLMLQ-GHRNSVISVAVANGS 362 (388)
T ss_dssp EEEEECGGGCEEEEEETTS----------------------------EEEEEETTTCCEEEEEE-CCSSCEEEEEECSSC
T ss_pred EEEEECCCCCEEEEEeCCC----------------------------EEEEEECCCCcEEEEEe-CCCCCEEEEEEecCc
Confidence 9999975 2333333333 34445555677777776 89999999975
Q ss_pred --eCCCCcEEEEecCCCeEEEEECCC
Q psy4579 309 --MPQNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 309 --~p~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
+|++ .+|||||.||+|+||++++
T Consensus 363 ~~spd~-~~l~s~s~Dg~I~iW~~~k 387 (388)
T d1erja_ 363 SLGPEY-NVFATGSGDCKARIWKYKK 387 (388)
T ss_dssp TTCTTC-EEEEEEETTSEEEEEEEEE
T ss_pred ccCCCC-CEEEEEeCCCEEEEEeeee
Confidence 5677 7899999999999999863
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.94 E-value=2.1e-26 Score=198.61 Aligned_cols=259 Identities=16% Similarity=0.191 Sum_probs=192.3
Q ss_pred hhhhhhhhhhcCcchheeecccccccCceeeEecCCcccccCCCCccccccCcceeeeccccCCCCCcEEEEEEecCCCc
Q psy4579 16 INEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNED 95 (368)
Q Consensus 16 ~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 95 (368)
.+...++|+..+..+...+.. ...++.+++|+|++..++.++.++.+..+............. ....+..+.+.+.+
T Consensus 37 ~Dg~i~iWd~~~~~~~~~~~~--h~~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 113 (317)
T d1vyhc1 37 EDATIKVWDYETGDFERTLKG--HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHG-HDHNVSSVSIMPNG 113 (317)
T ss_dssp SSSCEEEEETTTCCCCEEECC--CSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCC-CSSCEEEEEECSSS
T ss_pred CCCeEEEEECCCCCEEEEEeC--CCCcEEEEeeeccccccccccccccccccccccccccccccc-ccccceeeeccCCC
Confidence 356788999888777666654 356899999999999999998888775444332222111111 12234455554444
Q ss_pred cccccCCcccCCCCcccCCCCCe-eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceee
Q psy4579 96 AQFDASNYDTDKGGNVQLPNEDA-QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIF 174 (368)
Q Consensus 96 ~~~~~~~~~~~~~g~i~i~~~~~-~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~ 174 (368)
..+... ..|+.+++|+... +....+..|...+.+++|+|++ .+|++|+.||.|++|++.+.. ....+
T Consensus 114 ~~~~~~----~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~d~~v~~~~~~~~~-------~~~~~ 181 (317)
T d1vyhc1 114 DHIVSA----SRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDG-TLIASCSNDQTVRVWVVATKE-------CKAEL 181 (317)
T ss_dssp SEEEEE----ETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCC-------EEEEE
T ss_pred ceEEee----ccCcceeEeecccceeeeEEccCCCcceeeecccCC-CEEEEEeCCCeEEEEeeccce-------eeEEE
Confidence 333322 3589999999764 5566677899999999999998 999999999999999998764 45677
Q ss_pred eccccceecceeeEEeCCC-------------------CCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEe
Q psy4579 175 TGHTAVVEVRYGLSWNPSL-------------------NGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVE 235 (368)
Q Consensus 175 ~~h~~~v~~~~~i~~~p~~-------------------~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~ 235 (368)
.+|...+. +++|+|+. +.++++|+.|+.|++||++++ .++..+.+|...|.
T Consensus 182 ~~~~~~i~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~-------~~~~~~~~~~~~v~ 251 (317)
T d1vyhc1 182 REHRHVVE---CISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTG-------MCLMTLVGHDNWVR 251 (317)
T ss_dssp CCCSSCEE---EEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTT-------EEEEEEECCSSCEE
T ss_pred ecCCCCce---EEEEeeccccceeeccccceeeeeccCCceeEeccCCCEEEEEECCCC-------cEEEEEeCCCCCEE
Confidence 78888875 88887752 347999999999999999887 56788889999999
Q ss_pred EEEEee--ecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCC
Q psy4579 236 DYSIHR--LILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNP 313 (368)
Q Consensus 236 ~v~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~ 313 (368)
+++|++ ..+.+++.|+. +.+|+..++++...+. +|.+.|++++|+|++
T Consensus 252 ~~~~~~~~~~l~s~~~dg~----------------------------i~iwd~~~~~~~~~~~-~h~~~V~~~~~s~~~- 301 (317)
T d1vyhc1 252 GVLFHSGGKFILSCADDKT----------------------------LRVWDYKNKRCMKTLN-AHEHFVTSLDFHKTA- 301 (317)
T ss_dssp EEEECSSSSCEEEEETTTE----------------------------EEEECCTTSCCCEEEE-CCSSCEEEEEECSSS-
T ss_pred EEEECCCCCEEEEEECCCe----------------------------EEEEECCCCcEEEEEc-CCCCCEEEEEEcCCC-
Confidence 999986 23333333333 4445555566666665 899999999999999
Q ss_pred cEEEEecCCCeEEEEE
Q psy4579 314 CVIATKTPSSDVLVFD 329 (368)
Q Consensus 314 ~~lasgs~Dg~i~iwd 329 (368)
.+|+||+.||+|+|||
T Consensus 302 ~~l~s~s~Dg~i~iWd 317 (317)
T d1vyhc1 302 PYVVTGSVDQTVKVWE 317 (317)
T ss_dssp SCEEEEETTSEEEEEC
T ss_pred CEEEEEeCCCeEEEeC
Confidence 5778999999999997
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.94 E-value=6.9e-27 Score=204.37 Aligned_cols=237 Identities=15% Similarity=0.170 Sum_probs=169.2
Q ss_pred cccCceeeEecCCcccccCCCCccccccCcceeeeccccCCCCCcEEEEEEecCCCccccccCCcccCCCCcccCCCCCe
Q psy4579 39 LEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDA 118 (368)
Q Consensus 39 ~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~ 118 (368)
+..+|.+++|+|++++|++|+.||.|++|+.......+.... ....|.++.+.+.+..+..+. .|+.+.+|+...
T Consensus 54 H~~~I~~l~~s~~~~~l~sgs~Dg~v~iWd~~~~~~~~~~~~-~~~~v~~v~~~~~~~~l~~~~----~d~~i~~~~~~~ 128 (340)
T d1tbga_ 54 HLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPL-RSSWVMTCAYAPSGNYVACGG----LDNICSIYNLKT 128 (340)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEEEC-SCSCEEEEEECTTSSEEEEEE----TTCCEEEEESSS
T ss_pred CCCCEEEEEECCCCCEEEEEECCCceeeeecccceeEEEEec-ccccEEeeEeeccceeeeeec----ccceeecccccc
Confidence 567899999999999999999999997776543322222111 123466777755444333222 344444443110
Q ss_pred ----------------------------------------------eeeeccccCCCCceeeEecCCCCCeeEEEeCCCc
Q psy4579 119 ----------------------------------------------QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHT 152 (368)
Q Consensus 119 ----------------------------------------------~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~ 152 (368)
........+...+.+..+.+.+ .++++|+.|+.
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~ 207 (340)
T d1tbga_ 129 REGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDT-RLFVSGACDAS 207 (340)
T ss_dssp SCSCCCEEEEECCCSSCEEEEEEEETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEECTTS-SEEEEEETTTE
T ss_pred cccccccceecccccccccccccccccccccccccccccccccccccccccccccceeEeeecccccc-ceeEEeecCce
Confidence 1111223355677888888887 89999999999
Q ss_pred EEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceee--eecc
Q psy4579 153 ICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTI--FTGH 230 (368)
Q Consensus 153 v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~--~~~~ 230 (368)
|++||++++. +...+.+|...|. +++|+|+ +.+|++|+.||.|++||++... .... ...+
T Consensus 208 v~i~d~~~~~-------~~~~~~~h~~~i~---~v~~~p~-~~~l~s~s~d~~i~~~~~~~~~-------~~~~~~~~~~ 269 (340)
T d1tbga_ 208 AKLWDVREGM-------CRQTFTGHESDIN---AICFFPN-GNAFATGSDDATCRLFDLRADQ-------ELMTYSHDNI 269 (340)
T ss_dssp EEEEETTTTE-------EEEEECCCSSCEE---EEEECTT-SSEEEEEETTSCEEEEETTTTE-------EEEEECCTTC
T ss_pred EEEEECCCCc-------EEEEEeCCCCCeE---EEEECCC-CCEEEEEeCCCeEEEEeecccc-------cccccccccc
Confidence 9999998764 5678899999996 9999998 8999999999999999998763 2232 2346
Q ss_pred cccEeEEEEee--ecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEE
Q psy4579 231 TAVVEDYSIHR--LILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARY 308 (368)
Q Consensus 231 ~~~v~~v~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~ 308 (368)
...|.+++|++ .++.+++.|+ .+.+|+..+++....+. +|.++|++++|
T Consensus 270 ~~~i~~~~~s~~~~~l~~g~~dg----------------------------~i~iwd~~~~~~~~~~~-~H~~~V~~l~~ 320 (340)
T d1tbga_ 270 ICGITSVSFSKSGRLLLAGYDDF----------------------------NCNVWDALKADRAGVLA-GHDNRVSCLGV 320 (340)
T ss_dssp CSCEEEEEECSSSCEEEEEETTS----------------------------CEEEEETTTCCEEEEEC-CCSSCEEEEEE
T ss_pred cCceEEEEECCCCCEEEEEECCC----------------------------EEEEEECCCCcEEEEEc-CCCCCEEEEEE
Confidence 67789999975 2333333333 34445555666666665 89999999999
Q ss_pred eCCCCcEEEEecCCCeEEEEE
Q psy4579 309 MPQNPCVIATKTPSSDVLVFD 329 (368)
Q Consensus 309 ~p~~~~~lasgs~Dg~i~iwd 329 (368)
+|++ .+|+|||.||+|+|||
T Consensus 321 s~d~-~~l~s~s~Dg~v~iWd 340 (340)
T d1tbga_ 321 TDDG-MAVATGSWDSFLKIWN 340 (340)
T ss_dssp CTTS-SCEEEEETTSCEEEEC
T ss_pred eCCC-CEEEEEccCCEEEEeC
Confidence 9999 5778999999999997
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.94 E-value=2.7e-25 Score=191.41 Aligned_cols=258 Identities=9% Similarity=0.077 Sum_probs=174.2
Q ss_pred cccCceeeEecCCcccccCCCCccccccCcceeeeccccCC--CCCcEEEEEEecCCCccccccCCcccCCCCcccCCCC
Q psy4579 39 LEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSD--EQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNE 116 (368)
Q Consensus 39 ~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~ 116 (368)
+.-+|.+++|+||+++|++|+.||.+++|+.+ .+..... ......|.++.+.+++..+.+ +.|+.+++|+.
T Consensus 11 H~~~V~~l~~s~dg~~l~s~s~Dg~v~vWd~~--~~~~~~~~~~~h~~~v~~v~~~~~g~~~~~-----~~d~~v~~~~~ 83 (299)
T d1nr0a2 11 HNKAITALSSSADGKTLFSADAEGHINSWDIS--TGISNRVFPDVHATMITGIKTTSKGDLFTV-----SWDDHLKVVPA 83 (299)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEETT--TCCEEECSSCSCSSCEEEEEECTTSCEEEE-----ETTTEEEEECS
T ss_pred CCCCcEEEEECCCCCEEEEEcCCCeEEEEECC--CCcEEEEEcCCCCCcEEEEEeeccceeecc-----cceeeEEEecc
Confidence 45689999999999999999999999777543 3333222 222345788888665543332 24889999997
Q ss_pred Ceeeee----ccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCC
Q psy4579 117 DAQFDA----SNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPS 192 (368)
Q Consensus 117 ~~~~~~----~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~ 192 (368)
...... ....|...+.+++|+|++ ..++++ .++.+++|+.... ...... ..++ +++|+|+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~s~~g-~~~~~~-~~~~i~~~~~~~~---------~~~~~~--~~~~---~~~~s~~ 147 (299)
T d1nr0a2 84 GGSGVDSSKAVANKLSSQPLGLAVSADG-DIAVAA-CYKHIAIYSHGKL---------TEVPIS--YNSS---CVALSND 147 (299)
T ss_dssp SSSSSCTTSCCEEECSSCEEEEEECTTS-SCEEEE-ESSEEEEEETTEE---------EEEECS--SCEE---EEEECTT
T ss_pred CCcccccccccccccccccccccccccc-cccccc-ccccccccccccc---------cccccc--cccc---ccccccc
Confidence 653322 223477889999999998 666555 4678999985432 122222 2343 8999998
Q ss_pred CCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee--ecccccCCCCccceEEEEeecCCcccccc
Q psy4579 193 LNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LILGTHTSDEQNHLLIASVQLPNEDAQFD 270 (368)
Q Consensus 193 ~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 270 (368)
+.+|++|+.||.|++||++++.. .......|...|.+++|++ ..+.+++.++.+++|
T Consensus 148 -~~~l~~g~~dg~i~~~d~~~~~~------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~-------------- 206 (299)
T d1nr0a2 148 -KQFVAVGGQDSKVHVYKLSGASV------SEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPY-------------- 206 (299)
T ss_dssp -SCEEEEEETTSEEEEEEEETTEE------EEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEE--------------
T ss_pred -ccccccccccccccccccccccc------cccccccccccccccccccccccccccccccccccc--------------
Confidence 89999999999999999987521 1123445888999999986 234444444443333
Q ss_pred cccccCCCCCcccccCCCCceee--eeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCcee
Q psy4579 271 ASNYDTDKGDFGGFGSVSGKIEI--EIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLR 348 (368)
Q Consensus 271 ~~~~d~~~~~~~~~~~~~~~~~~--~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~ 348 (368)
+..++.... ....+|...|++++|+|++ .+|++|+.||.|++||++.. ...+...
T Consensus 207 --------------~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~-~~l~sgs~dg~i~iwd~~~~--------~~~~~~~ 263 (299)
T d1nr0a2 207 --------------SVANNFELAHTNSWTFHTAKVACVSWSPDN-VRLATGSLDNSVIVWNMNKP--------SDHPIII 263 (299)
T ss_dssp --------------EGGGTTEESCCCCCCCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTCT--------TSCCEEE
T ss_pred --------------cccccccccccccccccccccccccccccc-cceEEEcCCCEEEEEECCCC--------CcceEEE
Confidence 222222211 1123789999999999999 68889999999999999752 2333333
Q ss_pred eec-ccCceeeeccee
Q psy4579 349 LRG-HQKEGLIEGTYN 363 (368)
Q Consensus 349 ~~g-h~~~V~~l~w~p 363 (368)
..+ |...|.++.|.+
T Consensus 264 ~~~~~~~~v~~~~~~~ 279 (299)
T d1nr0a2 264 KGAHAMSSVNSVIWLN 279 (299)
T ss_dssp TTSSTTSCEEEEEEEE
T ss_pred ecCCCCCcEEEEEECC
Confidence 333 455677777755
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.93 E-value=4.7e-26 Score=204.44 Aligned_cols=292 Identities=9% Similarity=0.074 Sum_probs=170.8
Q ss_pred cccccCceeeEecCCcccccCCCCccccccCcceeeeccccCC-------CC-C--cEE-EEEEecCCCccccccCCccc
Q psy4579 37 HALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSD-------EQ-N--HLL-IASVQLPNEDAQFDASNYDT 105 (368)
Q Consensus 37 ~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-------~~-~--~~~-i~~~~~~~~~~~~~~~~~~~ 105 (368)
..++-+|.++++++ ++++++|.|+.+++|+........... .. . +.. ...+........+.+. .
T Consensus 11 ~~H~~~I~~v~~~~--~~l~S~S~D~~iriWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s---~ 85 (393)
T d1sq9a_ 11 KAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVAT---T 85 (393)
T ss_dssp SCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEE---E
T ss_pred CcccCccEEEEEeC--CEEEEEECCCeEEEEECCCCCCCcccceeEeeeeccCCceEeeeEeeeccCCCCCcEEEE---E
Confidence 45677899999875 588999999999887643321111000 00 0 111 1111111111112211 1
Q ss_pred CCCCcccCCCCCee-----------eeeccccCCCCceeeEecCCCC----CeeEEEeCCCcEEEEeCCCCCCCCcc---
Q psy4579 106 DKGGNVQLPNEDAQ-----------FDASNYDTDKGGYGLSWNPSLN----GYLLSASDDHTICLWDINATPKENRV--- 167 (368)
Q Consensus 106 ~~~g~i~i~~~~~~-----------~~~~~~~h~~~v~~l~~sp~~~----~~lasg~~dg~v~iwd~~~~~~~~~~--- 167 (368)
+.||.|++|+.... .......+...+..++|.++.+ .++++++.||++++|++.........
T Consensus 86 ~~dg~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~~~~~~~~~ 165 (393)
T d1sq9a_ 86 SFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTL 165 (393)
T ss_dssp ETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTT
T ss_pred eCCCcEEEEEccCCCceeeeeccccceeeeccCCCceEEEEEecCCCcccccEEEEEcCCCcEEEEEeecCCcccceeee
Confidence 35899999975321 0111223566778888887642 57899999999999998644221100
Q ss_pred -----cc---cceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEE
Q psy4579 168 -----ID---AKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSI 239 (368)
Q Consensus 168 -----~~---~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~ 239 (368)
.. .......+...+ .+++|+|+ + +||+|+.||+|+|||++++... ..+.....+.+|..+|++++|
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~---~~v~~s~d-g-~lasgs~Dg~i~iwd~~~~~~~-~~~~~~~~l~~h~~~V~~l~~ 239 (393)
T d1sq9a_ 166 NWSPTLELQGTVESPMTPSQFA---TSVDISER-G-LIATGFNNGTVQISELSTLRPL-YNFESQHSMINNSNSIRSVKF 239 (393)
T ss_dssp CCCCEEEEEEEECCSSSSCCCC---CEEEECTT-S-EEEEECTTSEEEEEETTTTEEE-EEEECCC---CCCCCEEEEEE
T ss_pred eeccceecccceecccCCCCcE---EEEEECCC-C-EEEEEeCCCcEEEEeecccccc-cccccccccccccceEEEccc
Confidence 00 011112233345 48999996 4 8999999999999999876321 112233456679999999999
Q ss_pred ee--ecccccCCCCccceEEEEeecCCcccccccccccCCCCCccc-cc-CCCCceeeeeecCcccceeEEEEeCCCCcE
Q psy4579 240 HR--LILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGG-FG-SVSGKIEIEIKINHEGEVNRARYMPQNPCV 315 (368)
Q Consensus 240 ~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~-~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~ 315 (368)
+| .++++++.|+....+ ..||...+.... .. ............+|.+.|++++|+|++ .+
T Consensus 240 spdg~~l~sgs~D~t~~~i---------------~lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~fspd~-~~ 303 (393)
T d1sq9a_ 240 SPQGSLLAIAHDSNSFGCI---------------TLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSG-ET 303 (393)
T ss_dssp CSSTTEEEEEEEETTEEEE---------------EEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSS-SE
T ss_pred ccccceeeeecCCCCccee---------------eecccccceeeeeeccccccccceeeeecccCceeeeccCCCC-Ce
Confidence 87 355555554432211 112222111000 00 000001111223899999999999999 68
Q ss_pred EEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeecccCceee----ecceeee
Q psy4579 316 IATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLI----EGTYNCY 365 (368)
Q Consensus 316 lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~----l~w~p~~ 365 (368)
|+|||.|++|+|||++. ...+..+.||.+.|.. ++|+|..
T Consensus 304 l~S~s~D~~v~vWd~~~----------g~~~~~l~gH~~~v~~~~~~~~~~~~~ 347 (393)
T d1sq9a_ 304 LCSAGWDGKLRFWDVKT----------KERITTLNMHCDDIEIEEDILAVDEHG 347 (393)
T ss_dssp EEEEETTSEEEEEETTT----------TEEEEEEECCGGGCSSGGGCCCBCTTS
T ss_pred eEEECCCCEEEEEECCC----------CCEEEEECCcCCcccCCccEEEECCCC
Confidence 88999999999999975 4566788999988864 5666543
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.93 E-value=1.1e-25 Score=197.47 Aligned_cols=280 Identities=11% Similarity=0.090 Sum_probs=191.0
Q ss_pred hhhhhhhhhhcCcchheeecccccccCceeeEecCCcccccCCCCccccccCcceeeeccccCC-CCCcEEEEEEecCCC
Q psy4579 16 INEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSD-EQNHLLIASVQLPNE 94 (368)
Q Consensus 16 ~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~ 94 (368)
.+...++|+..+..+...+.. ++.+|.+++|+|++ .|++++.|+.+++|............ .............+.
T Consensus 31 ~Dg~i~vWd~~~~~~~~~l~~--H~~~V~~l~~s~~~-~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (355)
T d1nexb2 31 DDKMIRVYDSINKKFLLQLSG--HDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKN 107 (355)
T ss_dssp TTTEEEEEETTTTEEEEEEEC--CSSCEEEEEEETTT-EEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEEEEETT
T ss_pred CCCeEEEEECCCCcEEEEEEC--CCCCEEEEEEcCCC-EEEEEecccccccccccccccccccccccccccccccccccc
Confidence 356789999888777666654 46789999999965 68899999999777655443222222 222233333333332
Q ss_pred ccccccCCcccCCCCcccCCCCCeeeeec------------------------cccCCCCceeeEecCCCCCeeEEEeCC
Q psy4579 95 DAQFDASNYDTDKGGNVQLPNEDAQFDAS------------------------NYDTDKGGYGLSWNPSLNGYLLSASDD 150 (368)
Q Consensus 95 ~~~~~~~~~~~~~~g~i~i~~~~~~~~~~------------------------~~~h~~~v~~l~~sp~~~~~lasg~~d 150 (368)
...+. .+ +.||.|++|+........ ...|...+. .+.+++ ++++++..|
T Consensus 108 ~~~~~-~~---~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~~~~~~-~~~~~~~~d 180 (355)
T d1nexb2 108 IKYIV-TG---SRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVR--TVSGHG-NIVVSGSYD 180 (355)
T ss_dssp EEEEE-EE---ETTSEEEEEECCC-----------CCCEEESCTTTCTTEEEEEECCSSCEE--EEEEET-TEEEEEETT
T ss_pred cceee-ee---cCCCcEEEEEccCCceeccccccceeccceeccccccceeeeeeecccccc--cccccc-ceeeeeccc
Confidence 22222 22 358999999875422111 111233333 344555 899999999
Q ss_pred CcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecc
Q psy4579 151 HTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGH 230 (368)
Q Consensus 151 g~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 230 (368)
+.|++||+.+++ ......++...+. ++.|+|. +.++++++.|+.|++||++++ .++..+.+|
T Consensus 181 ~~i~~~d~~~~~-------~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~d~~i~i~d~~~~-------~~~~~~~~h 242 (355)
T d1nexb2 181 NTLIVWDVAQMK-------CLYILSGHTDRIY---STIYDHE-RKRCISASMDTTIRIWDLENG-------ELMYTLQGH 242 (355)
T ss_dssp SCEEEEETTTTE-------EEEEECCCSSCEE---EEEEETT-TTEEEEEETTSCEEEEETTTC-------CEEEEECCC
T ss_pred ceeeeeeccccc-------ceeeeeccccccc---ccccccc-ceeeecccccceEEeeecccc-------ccccccccc
Confidence 999999998763 4566777777774 9999998 899999999999999999887 457788899
Q ss_pred cccEeEEEEeeecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEE-Ee
Q psy4579 231 TAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRAR-YM 309 (368)
Q Consensus 231 ~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~-~~ 309 (368)
...|.++++++..+.+++.|+.+++|. ..++... +. .|...+.++. ++
T Consensus 243 ~~~v~~~~~~~~~l~~~~~dg~i~iwd----------------------------~~~~~~~--~~-~~~~~~~~~~~~~ 291 (355)
T d1nexb2 243 TALVGLLRLSDKFLVSAAADGSIRGWD----------------------------ANDYSRK--FS-YHHTNLSAITTFY 291 (355)
T ss_dssp SSCCCEEEECSSEEEEECTTSEEEEEE----------------------------TTTCCEE--EE-EECTTCCCCCEEE
T ss_pred cccccccccccceeeeeeccccccccc----------------------------cccccee--cc-cccCCceEEEEEc
Confidence 999999999987777777776666542 1122222 22 4666666664 55
Q ss_pred CCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCc-eeeecccCceeeecceeeee
Q psy4579 310 PQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPD-LRLRGHQKEGLIEGTYNCYL 366 (368)
Q Consensus 310 p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~-~~~~gh~~~V~~l~w~p~~~ 366 (368)
|++ .++++| .||+|++||++. ...+ ..+.+|.++|++++|+|..+
T Consensus 292 ~~~-~~l~~g-~d~~i~vwd~~t----------g~~~~~~~~~~~~~V~~v~~~~~~~ 337 (355)
T d1nexb2 292 VSD-NILVSG-SENQFNIYNLRS----------GKLVHANILKDADQIWSVNFKGKTL 337 (355)
T ss_dssp ECS-SEEEEE-ETTEEEEEETTT----------CCBCCSCTTTTCSEEEEEEEETTEE
T ss_pred CCC-CEEEEE-eCCEEEEEECCC----------CCEEEEEecCCCCCEEEEEEcCCeE
Confidence 565 777665 589999999975 2222 24578999999999999753
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.93 E-value=3.6e-24 Score=186.89 Aligned_cols=217 Identities=16% Similarity=0.190 Sum_probs=154.4
Q ss_pred eeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEE
Q psy4579 120 FDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLS 199 (368)
Q Consensus 120 ~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s 199 (368)
...++.+|.++|++|+|+|++ .+||||+.||+|+|||+.++. ....+.+|..+|. +++|+|+ +.++++
T Consensus 47 ~~~tL~GH~~~I~~l~~s~~~-~~l~sgs~Dg~v~iWd~~~~~-------~~~~~~~~~~~v~---~v~~~~~-~~~l~~ 114 (340)
T d1tbga_ 47 TRRTLRGHLAKIYAMHWGTDS-RLLVSASQDGKLIIWDSYTTN-------KVHAIPLRSSWVM---TCAYAPS-GNYVAC 114 (340)
T ss_dssp EEEEECCCSSCEEEEEECTTS-SEEEEEETTTEEEEEETTTTE-------EEEEEECSCSCEE---EEEECTT-SSEEEE
T ss_pred eeEEECCCCCCEEEEEECCCC-CEEEEEECCCceeeeecccce-------eEEEEecccccEE---eeEeecc-ceeeee
Confidence 445678999999999999998 999999999999999998874 5678889999996 9999999 999999
Q ss_pred eeCCCcEEEEECCCCCCCCccccceeeeecccc-----------------------------------------cEeEEE
Q psy4579 200 ASDDHTICLWDINATPKENRVIDAKTIFTGHTA-----------------------------------------VVEDYS 238 (368)
Q Consensus 200 ~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~-----------------------------------------~v~~v~ 238 (368)
|+.|+.+++|+.......... ...+.+|.. .+....
T Consensus 115 ~~~d~~i~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (340)
T d1tbga_ 115 GGLDNICSIYNLKTREGNVRV---SRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLS 191 (340)
T ss_dssp EETTCCEEEEESSSSCSCCCE---EEEECCCSSCEEEEEEEETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEE
T ss_pred ecccceeeccccccccccccc---ceecccccccccccccccccccccccccccccccccccccccccccccceeEeeec
Confidence 999999999998765432211 112222221 122222
Q ss_pred Eee--ecccccCCCCccceEEE-----------------EeecCCcccccccccccCCCCCcccccCCCCceeeeee-cC
Q psy4579 239 IHR--LILGTHTSDEQNHLLIA-----------------SVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIK-IN 298 (368)
Q Consensus 239 ~~~--~~~~~~~~d~~~~~~~~-----------------~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~-~~ 298 (368)
+.+ ..+.++..++.+++|.. .+.+.++...+... ...+.+.+|+........... ..
T Consensus 192 ~~~~~~~~~~~~~d~~v~i~d~~~~~~~~~~~~h~~~i~~v~~~p~~~~l~s~---s~d~~i~~~~~~~~~~~~~~~~~~ 268 (340)
T d1tbga_ 192 LAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATG---SDDATCRLFDLRADQELMTYSHDN 268 (340)
T ss_dssp ECTTSSEEEEEETTTEEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEE---ETTSCEEEEETTTTEEEEEECCTT
T ss_pred cccccceeEEeecCceEEEEECCCCcEEEEEeCCCCCeEEEEECCCCCEEEEE---eCCCeEEEEeeccccccccccccc
Confidence 221 23444555555555521 12222222222221 123556777777776654432 35
Q ss_pred cccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeecccCceeeecceeee
Q psy4579 299 HEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 299 h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p~~ 365 (368)
|...|.+++|+|++ .+|++|+.||.|++||+.. ..++..+.+|.++|++++|+|+.
T Consensus 269 ~~~~i~~~~~s~~~-~~l~~g~~dg~i~iwd~~~----------~~~~~~~~~H~~~V~~l~~s~d~ 324 (340)
T d1tbga_ 269 IICGITSVSFSKSG-RLLLAGYDDFNCNVWDALK----------ADRAGVLAGHDNRVSCLGVTDDG 324 (340)
T ss_dssp CCSCEEEEEECSSS-CEEEEEETTSCEEEEETTT----------CCEEEEECCCSSCEEEEEECTTS
T ss_pred ccCceEEEEECCCC-CEEEEEECCCEEEEEECCC----------CcEEEEEcCCCCCEEEEEEeCCC
Confidence 67789999999999 6888999999999999975 45667889999999999999974
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.93 E-value=2.6e-25 Score=194.32 Aligned_cols=246 Identities=9% Similarity=0.057 Sum_probs=165.5
Q ss_pred cCceeeEecC--CcccccCCCCccccccCcceeeeccccCC-------CCCcEEEEEEecCCCccccccCCcccCCCCcc
Q psy4579 41 WPSLTAQWLP--DVTSVQLPNEDAQFDASNYDTDKGTHTSD-------EQNHLLIASVQLPNEDAQFDASNYDTDKGGNV 111 (368)
Q Consensus 41 ~~~~~~~~~p--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i 111 (368)
-++.+++|+| ++++|++|+.||.+++|++.......... ......|.++.+.+.+..+.+.+- +.++.+
T Consensus 64 ~~v~~v~fsP~~~g~~lasgs~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~--~~~~~~ 141 (325)
T d1pgua1 64 SVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGE--GRDNFG 141 (325)
T ss_dssp SCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEEC--CSSCSE
T ss_pred CCEEEEEEeeCCCCCEEEEEeCCCCEEEeeecCCcceeeeecccccccccccCcEEEEEECCCCCccceeec--cccceE
Confidence 4789999998 57899999999999777654332111110 011123667777665554443331 245666
Q ss_pred cCCCCC-eeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEe
Q psy4579 112 QLPNED-AQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWN 190 (368)
Q Consensus 112 ~i~~~~-~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~ 190 (368)
.+|+.+ ++....+.+|...|++++|+|+++.++++++.|+.+++||+...+.. .......+|...|. +++|+
T Consensus 142 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~----~~~~~~~~~~~~v~---~v~~~ 214 (325)
T d1pgua1 142 VFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFS----ASDRTHHKQGSFVR---DVEFS 214 (325)
T ss_dssp EEEETTTCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEE----EEECSSSCTTCCEE---EEEEC
T ss_pred EEEeecccccceeeeecccccccccccccccceEEEeecccccccccccccccc----eecccccCCCCccE---Eeeec
Confidence 677655 35566778899999999999998566889999999999998765321 12233456777785 99999
Q ss_pred CCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee-----ecccccCCCCccceEEEEeecCCc
Q psy4579 191 PSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR-----LILGTHTSDEQNHLLIASVQLPNE 265 (368)
Q Consensus 191 p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~-----~~~~~~~~d~~~~~~~~~~~~~~~ 265 (368)
|+.+.+|++|+.||.|++||++++ ..+..+.+|...+..+.|.. ..+.+++.|+.
T Consensus 215 pd~~~~l~s~~~d~~i~iwd~~~~-------~~~~~l~~~~~~v~~~~~s~~~~dg~~l~s~s~D~~------------- 274 (325)
T d1pgua1 215 PDSGEFVITVGSDRKISCFDGKSG-------EFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADAT------------- 274 (325)
T ss_dssp STTCCEEEEEETTCCEEEEETTTC-------CEEEECCBTTBCCCSCEEEEEESSSSEEEEEETTSE-------------
T ss_pred cccceeccccccccceeeeeeccc-------cccccccccccccccceeeeeccCCCEEEEEeCCCe-------------
Confidence 986789999999999999999887 45677888887776555542 23333333333
Q ss_pred ccccccccccCCCCCcccccCCCCceeeeeec-CcccceeEEEEeCCCCcEEEEecCCCeEEEEEC
Q psy4579 266 DAQFDASNYDTDKGDFGGFGSVSGKIEIEIKI-NHEGEVNRARYMPQNPCVIATKTPSSDVLVFDY 330 (368)
Q Consensus 266 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~-~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~ 330 (368)
+.+|++.+++.+..+.. .|...+..+++.+.+...|++||.||+|++||+
T Consensus 275 ---------------i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~dg~i~vwdl 325 (325)
T d1pgua1 275 ---------------IRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYEL 325 (325)
T ss_dssp ---------------EEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEET
T ss_pred ---------------EEEEECCCCCEEEEEEecCCcccCeEEEEEECCCCEEEEEECCCEEEEEEC
Confidence 44455555666555441 233344455555443346779999999999996
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.92 E-value=1.2e-24 Score=190.17 Aligned_cols=242 Identities=14% Similarity=0.133 Sum_probs=166.9
Q ss_pred CceeeEecCCcccccCCCCccccccCcceeeeccccC--C--CCCcEEEEEEecC-CCccccccCCcccCCCCcccCCCC
Q psy4579 42 PSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTS--D--EQNHLLIASVQLP-NEDAQFDASNYDTDKGGNVQLPNE 116 (368)
Q Consensus 42 ~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~g~i~i~~~ 116 (368)
.+.++.|+|+++.+++++.+.. .++.++........ . ......+.++.|. ..+..+.+++ +.||+|++|+.
T Consensus 19 ~~t~l~~~~~~~~la~~~~~~~-~i~~~~~~~~~~~~~~~~~gh~~~~v~~v~fsP~~~g~~lasg---s~Dg~i~iWd~ 94 (325)
T d1pgua1 19 FTTHLSYDPTTNAIAYPCGKSA-FVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSG---DESGKVIVWGW 94 (325)
T ss_dssp CCCCCEEETTTTEEEEEETTEE-EEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEE---ETTSEEEEEEE
T ss_pred CeEEEEECCCCCEEEEEeCCCE-EEEEEeCCCCCccceEEEeCCCCCCEEEEEEeeCCCCCEEEEE---eCCCCEEEeee
Confidence 4567999999999998765543 23334332221111 1 1223457788884 4455555554 56999999987
Q ss_pred Ceee---------eeccccCCCCceeeEecCCCCCeeEEEe--CCCcEEEEeCCCCCCCCcccccceeeeccccceecce
Q psy4579 117 DAQF---------DASNYDTDKGGYGLSWNPSLNGYLLSAS--DDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRY 185 (368)
Q Consensus 117 ~~~~---------~~~~~~h~~~v~~l~~sp~~~~~lasg~--~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 185 (368)
.... ......|.++|.+++|+|++ ..|++++ .++.+++|+.+++. ....+.+|...+.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~~~-~~l~~~~~~~~~~~~~~~~~~~~-------~~~~~~~h~~~v~--- 163 (325)
T d1pgua1 95 TFDKESNSVEVNVKSEFQVLAGPISDISWDFEG-RRLCVVGEGRDNFGVFISWDSGN-------SLGEVSGHSQRIN--- 163 (325)
T ss_dssp EEEGGGTEEEEEEEEEEECCSSCEEEEEECTTS-SEEEEEECCSSCSEEEEETTTCC-------EEEECCSCSSCEE---
T ss_pred cCCcceeeeecccccccccccCcEEEEEECCCC-CccceeeccccceEEEEeecccc-------cceeeeecccccc---
Confidence 5321 12235688999999999998 7777765 47789999998764 5678889999996
Q ss_pred eeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee---ecccccCCCCccceEEEEeec
Q psy4579 186 GLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR---LILGTHTSDEQNHLLIASVQL 262 (368)
Q Consensus 186 ~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~---~~~~~~~~d~~~~~~~~~~~~ 262 (368)
+++|+|++..++++++.|+.+++||++..... .......+|...|.+++|+| .++++++.|+.
T Consensus 164 ~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~----~~~~~~~~~~~~v~~v~~~pd~~~~l~s~~~d~~---------- 229 (325)
T d1pgua1 164 ACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFS----ASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRK---------- 229 (325)
T ss_dssp EEEECSSSSCEEEEEETTTEEEEEETTTBEEE----EEECSSSCTTCCEEEEEECSTTCCEEEEEETTCC----------
T ss_pred cccccccccceEEEeecccccccccccccccc----eecccccCCCCccEEeeeccccceeccccccccc----------
Confidence 99999985556889999999999998765211 12223456788899999986 23444444433
Q ss_pred CCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEe---CCCCcEEEEecCCCeEEEEECCC
Q psy4579 263 PNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYM---PQNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 263 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~---p~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
+.+|+..+++....+. +|..++.++.|+ |++ .+|++|+.|++|+|||++.
T Consensus 230 ------------------i~iwd~~~~~~~~~l~-~~~~~v~~~~~s~~~~dg-~~l~s~s~D~~i~iwd~~~ 282 (325)
T d1pgua1 230 ------------------ISCFDGKSGEFLKYIE-DDQEPVQGGIFALSWLDS-QKFATVGADATIRVWDVTT 282 (325)
T ss_dssp ------------------EEEEETTTCCEEEECC-BTTBCCCSCEEEEEESSS-SEEEEEETTSEEEEEETTT
T ss_pred ------------------eeeeeecccccccccc-ccccccccceeeeeccCC-CEEEEEeCCCeEEEEECCC
Confidence 3444444566655555 787777666665 677 5788999999999999975
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.91 E-value=1.5e-23 Score=180.32 Aligned_cols=218 Identities=13% Similarity=0.146 Sum_probs=152.0
Q ss_pred eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceee-eccccceecceeeEEeCCCCCeE
Q psy4579 119 QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIF-TGHTAVVEVRYGLSWNPSLNGYL 197 (368)
Q Consensus 119 ~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~i~~~p~~~~~l 197 (368)
.....+.+|.++|++|+|+|++ ++||||+.||+|++||++++. +...+ .+|...|+ +++|+|+ +. +
T Consensus 3 ~~~~~~~GH~~~V~~l~~s~dg-~~l~s~s~Dg~v~vWd~~~~~-------~~~~~~~~h~~~v~---~v~~~~~-g~-~ 69 (299)
T d1nr0a2 3 SIDQVRYGHNKAITALSSSADG-KTLFSADAEGHINSWDISTGI-------SNRVFPDVHATMIT---GIKTTSK-GD-L 69 (299)
T ss_dssp EEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCC-------EEECSSCSCSSCEE---EEEECTT-SC-E
T ss_pred ccceEcCCCCCCcEEEEECCCC-CEEEEEcCCCeEEEEECCCCc-------EEEEEcCCCCCcEE---EEEeecc-ce-e
Confidence 4566788999999999999998 999999999999999998864 33444 47888886 9999997 55 5
Q ss_pred EEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee--ecccccCCCCccceEE-------------EEeec
Q psy4579 198 LSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LILGTHTSDEQNHLLI-------------ASVQL 262 (368)
Q Consensus 198 ~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~d~~~~~~~-------------~~~~~ 262 (368)
++++.|+.+++|+....... ........+...+.++++++ .++.. ..++.+.+|. ..+.+
T Consensus 70 ~~~~~d~~v~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~s~~g~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 144 (299)
T d1nr0a2 70 FTVSWDDHLKVVPAGGSGVD----SSKAVANKLSSQPLGLAVSADGDIAVA-ACYKHIAIYSHGKLTEVPISYNSSCVAL 144 (299)
T ss_dssp EEEETTTEEEEECSSSSSSC----TTSCCEEECSSCEEEEEECTTSSCEEE-EESSEEEEEETTEEEEEECSSCEEEEEE
T ss_pred ecccceeeEEEeccCCcccc----ccccccccccccccccccccccccccc-cccccccccccccccccccccccccccc
Confidence 67788999999998654321 11222334666777888864 12221 1222333331 11222
Q ss_pred CCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCC
Q psy4579 263 PNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGE 342 (368)
Q Consensus 263 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~ 342 (368)
.++...+.+. ...+.+.+|+..+++........|...|++++|+|++ .+|++++.|+.|++||+.....
T Consensus 145 s~~~~~l~~g---~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~~~~~~~~~~------- 213 (299)
T d1nr0a2 145 SNDKQFVAVG---GQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNG-AFLVATDQSRKVIPYSVANNFE------- 213 (299)
T ss_dssp CTTSCEEEEE---ETTSEEEEEEEETTEEEEEEEEECSSCEEEEEECTTS-SEEEEEETTSCEEEEEGGGTTE-------
T ss_pred cccccccccc---ccccccccccccccccccccccccccccccccccccc-cccccccccccccccccccccc-------
Confidence 2322222222 2345677888877766554445799999999999999 6788999999999999975221
Q ss_pred CCCceeeecccCceeeecceeee
Q psy4579 343 CHPDLRLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 343 ~~~~~~~~gh~~~V~~l~w~p~~ 365 (368)
......+.+|.+.|++++|+|+.
T Consensus 214 ~~~~~~~~~h~~~v~~l~~s~~~ 236 (299)
T d1nr0a2 214 LAHTNSWTFHTAKVACVSWSPDN 236 (299)
T ss_dssp ESCCCCCCCCSSCEEEEEECTTS
T ss_pred ccccccccccccccccccccccc
Confidence 22234567899999999999975
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.90 E-value=8.7e-24 Score=183.80 Aligned_cols=292 Identities=10% Similarity=0.036 Sum_probs=168.7
Q ss_pred cccccCceeeEecCCcccccCCCCccccccCcceeeeccc--cCCCCCcEEEEEEecCCCccccccCCcccCCCCcccCC
Q psy4579 37 HALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTH--TSDEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLP 114 (368)
Q Consensus 37 ~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~ 114 (368)
+.++-.|.+++|+|++++|++||.||++++|+++...... .........|.++.|.+.+....+++ +.||.|++|
T Consensus 8 ~~h~d~I~~l~fsp~~~~L~s~s~Dg~v~iwd~~~~~~~~~~~~~~~h~~~V~~v~f~~~~~~~l~sg---~~d~~v~~w 84 (342)
T d1yfqa_ 8 QAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVG---TVQGEILKV 84 (342)
T ss_dssp SCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEE---ETTSCEEEE
T ss_pred CCCCCCEEEEEEeCCCCEEEEEECCCeEEEEEccCCCcceEEEEecCCCCCEEEEEEeCCCCCEEEEc---ccccceeee
Confidence 3445569999999999999999999999777654322111 11111223477777754433333332 368999999
Q ss_pred CCCeeee-eccccCC-CCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCC
Q psy4579 115 NEDAQFD-ASNYDTD-KGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPS 192 (368)
Q Consensus 115 ~~~~~~~-~~~~~h~-~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~ 192 (368)
+...... .....+. .......+.++. ..+++++.|+++++||++....... .......+..... ...+.+.+.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~wd~~~~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~ 159 (342)
T d1yfqa_ 85 DLIGSPSFQALTNNEANLGICRICKYGD-DKLIAASWDGLIEVIDPRNYGDGVI---AVKNLNSNNTKVK-NKIFTMDTN 159 (342)
T ss_dssp CSSSSSSEEECBSCCCCSCEEEEEEETT-TEEEEEETTSEEEEECHHHHTTBCE---EEEESCSSSSSSC-CCEEEEEEC
T ss_pred eccccccccccccccccccccccccccc-ccccccccccccceeecccccccee---eecccccccccce-eeeeeeecc
Confidence 9875332 2233333 344445555665 8999999999999999876542211 1112222221111 025566776
Q ss_pred CCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee---ecccccCCCCccceEEEEeecCCccccc
Q psy4579 193 LNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR---LILGTHTSDEQNHLLIASVQLPNEDAQF 269 (368)
Q Consensus 193 ~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~---~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 269 (368)
...+++++.|+.|++||++....... ......+...+.+..+.+ ..+.+++.++.+.++....... ..
T Consensus 160 -~~~~~~~~~d~~i~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~v~~~~~~~~----~~ 230 (342)
T d1yfqa_ 160 -SSRLIVGMNNSQVQWFRLPLCEDDNG----TIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGD----DY 230 (342)
T ss_dssp -SSEEEEEESTTEEEEEESSCCTTCCC----EEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCC----ST
T ss_pred -CCceeeecCCCcEEEEecccCcccce----eeeecccccceeeeEeecCCCCEEEeecCCCeEEEEEecCCcc----ee
Confidence 88999999999999999987643221 122223334444444432 3444445555444443221000 00
Q ss_pred ccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceee
Q psy4579 270 DASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRL 349 (368)
Q Consensus 270 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 349 (368)
.. ... .......... ...+|...|++++|+|++ .+||||+.||+|++||++. ...+..+
T Consensus 231 ~~-----~~~----~~~~~~~~~~-~~~~~~~~v~~l~~sp~~-~~lasg~~Dg~v~vWD~~~----------~~~l~~~ 289 (342)
T d1yfqa_ 231 NS-----SKR----FAFRCHRLNL-KDTNLAYPVNSIEFSPRH-KFLYTAGSDGIISCWNLQT----------RKKIKNF 289 (342)
T ss_dssp TC-----TTC----EEEECCCCCT-TCCSSCCCEEEEEECTTT-CCEEEEETTSCEEEEETTT----------TEEEEEC
T ss_pred ec-----ccc----ceeeeeeecc-CCCcccccceeEEecCCc-cEEEEECCCCEEEEEECCC----------CcEEEEe
Confidence 00 000 0000000000 112677899999999999 5788999999999999975 3334444
Q ss_pred e-cccCceeeecceeeee
Q psy4579 350 R-GHQKEGLIEGTYNCYL 366 (368)
Q Consensus 350 ~-gh~~~V~~l~w~p~~~ 366 (368)
. .|...+.++++++.++
T Consensus 290 ~~~~~~~~~~~s~~~~~l 307 (342)
T d1yfqa_ 290 AKFNEDSVVKIACSDNIL 307 (342)
T ss_dssp CCCSSSEEEEEEECSSEE
T ss_pred cCCCCCEEEEEEeCCCEE
Confidence 3 4566666666666553
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.89 E-value=3.8e-22 Score=170.44 Aligned_cols=240 Identities=12% Similarity=0.089 Sum_probs=148.9
Q ss_pred cccCceeeEecCCcccccCCCCccccccCcceeeeccccCCCCCcEEEEEEecCCCccccccCCcccCCCCcccCCCCCe
Q psy4579 39 LEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDA 118 (368)
Q Consensus 39 ~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~ 118 (368)
+.-||.+++|+| |++|+.||.+++|+....... + ...|.++.+.+.. .+... +.|+++++|+...
T Consensus 12 H~~~I~~l~~s~----l~sgs~Dg~v~~Wd~~~~~~~----h--~~~V~~~~~~~~~-~~~s~----s~D~~v~~w~~~~ 76 (287)
T d1pgua2 12 HNKGITALTVNP----LISGSYDGRIMEWSSSSMHQD----H--SNLIVSLDNSKAQ-EYSSI----SWDDTLKVNGITK 76 (287)
T ss_dssp CSSCEEEEETTT----TEEEETTSCEEETTTTEEECC----C--CSCEEEEECCSTT-CCEEE----ETTTEEEETTEEE
T ss_pred CCCceEEEEECc----EEEEeCCCeEEEEECCCCCCC----C--CCCEEEEEecCCC-eEEEE----eeccccccccccc
Confidence 466999999988 899999999988865432211 1 1235666665433 22222 2467777776432
Q ss_pred ee----------------------------------eeccccCCCCceeeEecCCCCCeeEEEeCC-CcEEEEeCCCCCC
Q psy4579 119 QF----------------------------------DASNYDTDKGGYGLSWNPSLNGYLLSASDD-HTICLWDINATPK 163 (368)
Q Consensus 119 ~~----------------------------------~~~~~~h~~~v~~l~~sp~~~~~lasg~~d-g~v~iwd~~~~~~ 163 (368)
.. ......+.. .+.+++|++ ..+++++.| +.+++|++.....
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~v~~~~~~~v~~~~~~~~~~ 153 (287)
T d1pgua2 77 HEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNS--PGSAVSLSQ-NYVAVGLEEGNTIQVFKLSDLEV 153 (287)
T ss_dssp EECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSS--CEEEEEECS-SEEEEEETTTSCEEEEETTEEEE
T ss_pred cccccceeeeeeccCCceEEEeecccceeeeccceeeeeeccccc--eeeeeeccC-cceeeeccccceeeeeeccccce
Confidence 11 001111122 234556666 667777665 4799999875421
Q ss_pred CCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeeec
Q psy4579 164 ENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLI 243 (368)
Q Consensus 164 ~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~ 243 (368)
.......|...++ +++|+|+ +.+|++|+.||.|++||+.++.. ....+.+|...|.+++|+|..
T Consensus 154 ------~~~~~~~~~~~v~---~~~~s~~-~~~l~~g~~dg~i~i~d~~~~~~------~~~~~~~h~~~v~~~~~~p~~ 217 (287)
T d1pgua2 154 ------SFDLKTPLRAKPS---YISISPS-ETYIAAGDVMGKILLYDLQSREV------KTSRWAFRTSKINAISWKPAE 217 (287)
T ss_dssp ------EEECSSCCSSCEE---EEEECTT-SSEEEEEETTSCEEEEETTTTEE------EECCSCCCSSCEEEEEECCCC
T ss_pred ------eeeeeeccCCcee---EEEeccC-ccccccccccccccceeeccccc------ccccccccccccceeeecccc
Confidence 1122234677785 9999999 89999999999999999987631 123456799999999998632
Q ss_pred ccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCC
Q psy4579 244 LGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSS 323 (368)
Q Consensus 244 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg 323 (368)
........... ++++. ...+.+.+|+...+........+|...|++++|+|++ . |+|++.|+
T Consensus 218 ~~~~~~~~~~~-~l~sg---------------s~D~~i~iw~~~~~~~~~~~~~~h~~~V~~v~~~~~~-~-l~s~g~D~ 279 (287)
T d1pgua2 218 KGANEEEIEED-LVATG---------------SLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPS-T-LVSSGADA 279 (287)
T ss_dssp ------CCSCC-EEEEE---------------ETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETT-E-EEEEETTS
T ss_pred cccccccCCCC-eeEee---------------cCCCeEEEEECCCCCeEEEEeCCCCCCeEEEEECCCC-E-EEEEECCC
Confidence 11100000001 11111 0123344455444444445555899999999999987 4 56889999
Q ss_pred eEEEEEC
Q psy4579 324 DVLVFDY 330 (368)
Q Consensus 324 ~i~iwd~ 330 (368)
+|++|++
T Consensus 280 ~v~iW~i 286 (287)
T d1pgua2 280 CIKRWNV 286 (287)
T ss_dssp CEEEEEE
T ss_pred eEEEEEE
Confidence 9999996
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.89 E-value=4.7e-22 Score=172.99 Aligned_cols=277 Identities=15% Similarity=0.161 Sum_probs=184.4
Q ss_pred hhhhhhhhhhcCcchheeecccccccCceeeEecCCcccccCCCCccccccCcceeeeccccCCCCCcEEEEEEecCCCc
Q psy4579 16 INEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNED 95 (368)
Q Consensus 16 ~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 95 (368)
.+...++|+..+..+...+..| ..+|.+++|+|+ .|++++.|+.+++|................ .+........
T Consensus 35 ~Dg~i~vWd~~~~~~~~~~~~h--~~~V~~v~~~~~--~l~s~s~D~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~- 108 (342)
T d2ovrb2 35 DDNTLKVWSAVTGKCLRTLVGH--TGGVWSSQMRDN--IIISGSTDRTLKVWNAETGECIHTLYGHTS-TVRCMHLHEK- 108 (342)
T ss_dssp TTSCEEEEETTTCCEEEECCCC--SSCEEEEEEETT--EEEEEETTSCEEEEETTTTEEEEEECCCSS-CEEEEEEETT-
T ss_pred CCCeEEEEECCCCCEEEEEeCC--CCCEEEEEeCCC--ccccceecccccccccccccceecccccce-eEeeeecccc-
Confidence 3566889999887777666544 568999999985 889999999997665543322222221111 1222222111
Q ss_pred cccccCCcccCCCCcccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeee
Q psy4579 96 AQFDASNYDTDKGGNVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFT 175 (368)
Q Consensus 96 ~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~ 175 (368)
... ....++.+.+|+...........+..... ....+.. ..+++++.|+.|++||..... ....+.
T Consensus 109 -~~~----~~~~d~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~d~~i~~~d~~~~~-------~~~~~~ 174 (342)
T d2ovrb2 109 -RVV----SGSRDATLRVWDIETGQCLHVLMGHVAAV-RCVQYDG-RRVVSGAYDFMVKVWDPETET-------CLHTLQ 174 (342)
T ss_dssp -EEE----EEETTSEEEEEESSSCCEEEEEECCSSCE-EEEEECS-SCEEEEETTSCEEEEEGGGTE-------EEEEEC
T ss_pred -ccc----ccccceeEEEeecccccceeeeecccccc-eeecccc-ceeeeecCCCeEEEeecccce-------eeEEEc
Confidence 111 11347888898876543333222222222 2334444 789999999999999998753 457778
Q ss_pred ccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeeecccccCCCCccce
Q psy4579 176 GHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHL 255 (368)
Q Consensus 176 ~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~ 255 (368)
+|...+ ..+.++ +.++++|+.||.|++||++.. .++..+.+|...+.++++++..+.+++.|+.+++
T Consensus 175 ~~~~~~-----~~~~~~-~~~l~s~~~dg~i~~~d~~~~-------~~~~~~~~~~~~v~~~~~~~~~l~s~s~d~~i~i 241 (342)
T d2ovrb2 175 GHTNRV-----YSLQFD-GIHVVSGSLDTSIRVWDVETG-------NCIHTLTGHQSLTSGMELKDNILVSGNADSTVKI 241 (342)
T ss_dssp CCSSCE-----EEEEEC-SSEEEEEETTSCEEEEETTTC-------CEEEEECCCCSCEEEEEEETTEEEEEETTSCEEE
T ss_pred Cccccc-----ccccCC-CCEEEEEeCCCeEEEeecccc-------eeeeEecccccceeEEecCCCEEEEEcCCCEEEE
Confidence 887665 344455 789999999999999999887 4567888899999999999877777777766666
Q ss_pred EEEEeecCCcccccccccccCCCCCcccccCCCCceeeeee--cCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCC
Q psy4579 256 LIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIK--INHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKH 333 (368)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~--~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~ 333 (368)
|.. ...+....+. ..|...+.++.+++ .++++|+.||+|++||++.
T Consensus 242 wd~----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~s~s~Dg~i~iwd~~t- 289 (342)
T d2ovrb2 242 WDI----------------------------KTGQCLQTLQGPNKHQSAVTCLQFNK---NFVITSSDDGTVKLWDLKT- 289 (342)
T ss_dssp EET----------------------------TTCCEEEEECSTTSCSSCEEEEEECS---SEEEEEETTSEEEEEETTT-
T ss_pred Eec----------------------------ccccccccccccceeeeceeecccCC---CeeEEEcCCCEEEEEECCC-
Confidence 521 1222222222 24666777777764 4788999999999999975
Q ss_pred CCCCCCCCCCCCceee-----ecccCceeeecceeeee
Q psy4579 334 PSKPDPNGECHPDLRL-----RGHQKEGLIEGTYNCYL 366 (368)
Q Consensus 334 ~~~~~~~~~~~~~~~~-----~gh~~~V~~l~w~p~~~ 366 (368)
...+..+ .+|.+.|++++|+|+..
T Consensus 290 ---------g~~i~~~~~~~~~~~~~~v~~v~~s~~~~ 318 (342)
T d2ovrb2 290 ---------GEFIRNLVTLESGGSGGVVWRIRASNTKL 318 (342)
T ss_dssp ---------CCEEEEEEECTTGGGTCEEEEEEECSSEE
T ss_pred ---------CCEEEEEecccCCCCCCCEEEEEECCCCC
Confidence 2222233 37889999999999753
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.87 E-value=5.4e-22 Score=168.73 Aligned_cols=257 Identities=18% Similarity=0.248 Sum_probs=175.9
Q ss_pred hhhhhhhhhhcCcchheeecccccccCceeeEecCCcccccCCCCccccccCcceeeeccccCCCCCcEEEEEEecCCCc
Q psy4579 16 INEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNED 95 (368)
Q Consensus 16 ~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 95 (368)
.+...++|+.++..+...+.. +..+|.+++| ++++|++|+.|+.+.+|................... . ..+...
T Consensus 33 ~Dg~i~vWd~~~~~~~~~l~~--H~~~V~~v~~--~~~~l~s~s~D~~i~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~ 106 (293)
T d1p22a2 33 RDNTIKIWDKNTLECKRILTG--HTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVL-H-LRFNNG 106 (293)
T ss_dssp SSSCEEEEESSSCCEEEEECC--CSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEE-E-EECCTT
T ss_pred CCCeEEEEECCCCcEEEEEec--CCCCEeeeec--ccceeecccccccccccccccccccccccccccccc-c-cccccc
Confidence 456678999888877766654 3557888887 677899999999986665443322221121111111 1 112222
Q ss_pred cccccCCcccCCCCcccCCCCCe----eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccc
Q psy4579 96 AQFDASNYDTDKGGNVQLPNEDA----QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAK 171 (368)
Q Consensus 96 ~~~~~~~~~~~~~g~i~i~~~~~----~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~ 171 (368)
..+.+ ..++.+.+|+... ........|...|.++.+.+ ..+++++.|+.|++||+++.+ +.
T Consensus 107 ~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~~~s~d~~i~~~d~~~~~-------~~ 171 (293)
T d1p22a2 107 MMVTC-----SKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDD---KYIVSASGDRTIKVWNTSTCE-------FV 171 (293)
T ss_dssp EEEEE-----ETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEET---TEEEEEETTSEEEEEETTTCC-------EE
T ss_pred ceeec-----ccccceeEeeccccccccccccccccccccccceecc---cccccccCCCceeeecCCCCc-------EE
Confidence 11111 3478888888653 23445567888998888875 568899999999999998764 56
Q ss_pred eeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeeecccccCCCC
Q psy4579 172 TIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDE 251 (368)
Q Consensus 172 ~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~ 251 (368)
..+.+|...+. .+.++ +..+++++.||+|++||+++. ..+..+.+|...+..+......+.+++.|+
T Consensus 172 ~~~~~~~~~v~---~~~~~---~~~l~~~~~dg~i~i~d~~~~-------~~~~~~~~~~~~v~~~~~~~~~l~sg~~dg 238 (293)
T d1p22a2 172 RTLNGHKRGIA---CLQYR---DRLVVSGSSDNTIRLWDIECG-------ACLRVLEGHEELVRCIRFDNKRIVSGAYDG 238 (293)
T ss_dssp EEEECCSSCEE---EEEEE---TTEEEEEETTSCEEEEETTTC-------CEEEEECCCSSCEEEEECCSSEEEEEETTS
T ss_pred EEEcccccccc---cccCC---CCeEEEecCCCEEEEEecccc-------eeeeeecccceeeeeccccceEEEEEcCCC
Confidence 77888888774 66665 568999999999999999887 456777888888888888877788888888
Q ss_pred ccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEE
Q psy4579 252 QNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFD 329 (368)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd 329 (368)
.+++|........ ...........+ .+|.+.|++++|++ .+|+|||.||+|+|||
T Consensus 239 ~i~iwd~~~~~~~-------------------~~~~~~~~~~~~-~~H~~~V~~v~~d~---~~l~s~s~Dg~i~iWD 293 (293)
T d1p22a2 239 KIKVWDLVAALDP-------------------RAPAGTLCLRTL-VEHSGRVFRLQFDE---FQIVSSSHDDTILIWD 293 (293)
T ss_dssp CEEEEEHHHHTST-------------------TSCTTTTEEEEE-CCCSSCCCCEEECS---SCEEECCSSSEEEEEC
T ss_pred EEEEEECCCCccc-------------------cccCCceeeEEe-cCCCCCEEEEEEcC---CEEEEEecCCEEEEeC
Confidence 8777643311000 000011222333 48999999999954 4678999999999998
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.87 E-value=3.4e-21 Score=163.71 Aligned_cols=263 Identities=15% Similarity=0.157 Sum_probs=175.8
Q ss_pred CceeeEecCCcccccCCCCccccccCcceeeeccccCCCC-CcEEEEEEecCCCccccccCCcccCCCCcccCCCCCeee
Q psy4579 42 PSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQ-NHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQF 120 (368)
Q Consensus 42 ~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~ 120 (368)
.|.|++ +|+++|++|+.||.|++|+.+ .+....... ....|.++.+. + ...+++ +.||.|++|+.....
T Consensus 17 ~V~c~~--~d~~~l~sgs~Dg~i~vWd~~--~~~~~~~l~~H~~~V~~v~~~--~-~~l~s~---s~D~~i~~~~~~~~~ 86 (293)
T d1p22a2 17 GVYCLQ--YDDQKIVSGLRDNTIKIWDKN--TLECKRILTGHTGSVLCLQYD--E-RVIITG---SSDSTVRVWDVNTGE 86 (293)
T ss_dssp CEEEEE--CCSSEEEEEESSSCEEEEESS--SCCEEEEECCCSSCEEEEECC--S-SEEEEE---ETTSCEEEEESSSCC
T ss_pred CEEEEE--EcCCEEEEEeCCCeEEEEECC--CCcEEEEEecCCCCEeeeecc--c-ceeecc---ccccccccccccccc
Confidence 466655 589999999999999777553 333332211 12235666662 2 222222 469999999987654
Q ss_pred eeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEe
Q psy4579 121 DASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSA 200 (368)
Q Consensus 121 ~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~ 200 (368)
......+..... ..+.+.. ..++++..++.+++|+....... .....+..|...+. .+.+. ...++++
T Consensus 87 ~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~v~---~~~~~---~~~~~~~ 154 (293)
T d1p22a2 87 MLNTLIHHCEAV-LHLRFNN-GMMVTCSKDRSIAVWDMASPTDI----TLRRVLVGHRAAVN---VVDFD---DKYIVSA 154 (293)
T ss_dssp EEEEECCCCSCE-EEEECCT-TEEEEEETTSCEEEEECSSSSCC----EEEEEECCCSSCEE---EEEEE---TTEEEEE
T ss_pred cccccccccccc-ccccccc-cceeecccccceeEeeccccccc----cccccccccccccc---cceec---ccccccc
Confidence 443333333222 3344444 78999999999999999876432 13345667777774 66665 4578899
Q ss_pred eCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeeecccccCCCCccceEEEEeecCCcccccccccccCCCCC
Q psy4579 201 SDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGD 280 (368)
Q Consensus 201 s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 280 (368)
+.|+.|++||+++. .++..+.++...+..+.+++..+.++..|+.+++|
T Consensus 155 s~d~~i~~~d~~~~-------~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~------------------------ 203 (293)
T d1p22a2 155 SGDRTIKVWNTSTC-------EFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLW------------------------ 203 (293)
T ss_dssp ETTSEEEEEETTTC-------CEEEEEECCSSCEEEEEEETTEEEEEETTSCEEEE------------------------
T ss_pred cCCCceeeecCCCC-------cEEEEEcccccccccccCCCCeEEEecCCCEEEEE------------------------
Confidence 99999999999887 45677888888999988887666666655554443
Q ss_pred cccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeecccCceeeec
Q psy4579 281 FGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEG 360 (368)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~ 360 (368)
+..+........ +|...+.. +.+++ .+|++|+.||.|++||++........ ....++..+.+|.+.|++++
T Consensus 204 ----d~~~~~~~~~~~-~~~~~v~~--~~~~~-~~l~sg~~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~H~~~V~~v~ 274 (293)
T d1p22a2 204 ----DIECGACLRVLE-GHEELVRC--IRFDN-KRIVSGAYDGKIKVWDLVAALDPRAP-AGTLCLRTLVEHSGRVFRLQ 274 (293)
T ss_dssp ----ETTTCCEEEEEC-CCSSCEEE--EECCS-SEEEEEETTSCEEEEEHHHHTSTTSC-TTTTEEEEECCCSSCCCCEE
T ss_pred ----ecccceeeeeec-ccceeeee--ccccc-eEEEEEcCCCEEEEEECCCCcccccc-CCceeeEEecCCCCCEEEEE
Confidence 333344444443 67777765 45566 67889999999999998653322211 12334567889999999999
Q ss_pred ceeeee
Q psy4579 361 TYNCYL 366 (368)
Q Consensus 361 w~p~~~ 366 (368)
|+|.++
T Consensus 275 ~d~~~l 280 (293)
T d1p22a2 275 FDEFQI 280 (293)
T ss_dssp ECSSCE
T ss_pred EcCCEE
Confidence 998764
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.86 E-value=1e-21 Score=171.78 Aligned_cols=257 Identities=15% Similarity=0.186 Sum_probs=172.2
Q ss_pred hhhhhhhhhcCcchheeecccccccCceeeEecCCcccccCCCCccccccCcceeeeccccCCCC------------CcE
Q psy4579 17 NEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQ------------NHL 84 (368)
Q Consensus 17 ~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~ 84 (368)
+...++|...................+..+.+.|++..+++++.|+.+.+|+............. ...
T Consensus 73 D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (355)
T d1nexb2 73 DRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPY 152 (355)
T ss_dssp TCCEEEEETTTTEEEEEECCCSSCEEEEEEEEETTEEEEEEEETTSEEEEEECCC-----------CCCEEESCTTTCTT
T ss_pred ccccccccccccccccccccccccccccccccccccceeeeecCCCcEEEEEccCCceeccccccceeccceeccccccc
Confidence 45567788877766665555555566777889999999999999999976654332111111100 000
Q ss_pred EEEEEecCC-------CccccccCCcccCCCCcccCCCCCe-eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEE
Q psy4579 85 LIASVQLPN-------EDAQFDASNYDTDKGGNVQLPNEDA-QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLW 156 (368)
Q Consensus 85 ~i~~~~~~~-------~~~~~~~~~~~~~~~g~i~i~~~~~-~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iw 156 (368)
.+....... .+....+ ....|+.+++|+... +.......+...+.++.|+|++ ..+++++.||.|++|
T Consensus 153 ~~~~~~~~~~~v~~~~~~~~~~~---~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~i~i~ 228 (355)
T d1nexb2 153 FVGVLRGHMASVRTVSGHGNIVV---SGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHER-KRCISASMDTTIRIW 228 (355)
T ss_dssp EEEEEECCSSCEEEEEEETTEEE---EEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTT-TEEEEEETTSCEEEE
T ss_pred eeeeeeeccccccccccccceee---eecccceeeeeecccccceeeeeccccccccccccccc-eeeecccccceEEee
Confidence 111111000 0001111 123578999999764 4555667788999999999998 899999999999999
Q ss_pred eCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeE
Q psy4579 157 DINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVED 236 (368)
Q Consensus 157 d~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~ 236 (368)
|++++. ....+.+|...|. +++|+ +++|++|+.||.|++||+++.. ..+..|...+.+
T Consensus 229 d~~~~~-------~~~~~~~h~~~v~---~~~~~---~~~l~~~~~dg~i~iwd~~~~~---------~~~~~~~~~~~~ 286 (355)
T d1nexb2 229 DLENGE-------LMYTLQGHTALVG---LLRLS---DKFLVSAAADGSIRGWDANDYS---------RKFSYHHTNLSA 286 (355)
T ss_dssp ETTTCC-------EEEEECCCSSCCC---EEEEC---SSEEEEECTTSEEEEEETTTCC---------EEEEEECTTCCC
T ss_pred eccccc-------ccccccccccccc---ccccc---cceeeeeecccccccccccccc---------eecccccCCceE
Confidence 998874 5678899999996 88886 4689999999999999998762 345556666655
Q ss_pred EEEee---ecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCC
Q psy4579 237 YSIHR---LILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNP 313 (368)
Q Consensus 237 v~~~~---~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~ 313 (368)
+.+.+ .++.++ .| +.+.+|+..+++++.....+|.+.|.+++|+|+
T Consensus 287 ~~~~~~~~~~l~~g-~d----------------------------~~i~vwd~~tg~~~~~~~~~~~~~V~~v~~~~~-- 335 (355)
T d1nexb2 287 ITTFYVSDNILVSG-SE----------------------------NQFNIYNLRSGKLVHANILKDADQIWSVNFKGK-- 335 (355)
T ss_dssp CCEEEECSSEEEEE-ET----------------------------TEEEEEETTTCCBCCSCTTTTCSEEEEEEEETT--
T ss_pred EEEEcCCCCEEEEE-eC----------------------------CEEEEEECCCCCEEEEEecCCCCCEEEEEEcCC--
Confidence 54322 111111 11 234555556666654444589999999999986
Q ss_pred cEEEEecCCCeEEEEEC
Q psy4579 314 CVIATKTPSSDVLVFDY 330 (368)
Q Consensus 314 ~~lasgs~Dg~i~iwd~ 330 (368)
.++++++.||+++||.+
T Consensus 336 ~~~~~~s~dg~~~l~~~ 352 (355)
T d1nexb2 336 TLVAAVEKDGQSFLEIL 352 (355)
T ss_dssp EEEEEEESSSCEEEEEE
T ss_pred eEEEEEECCCcEEEEEE
Confidence 47889999999777654
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.86 E-value=3e-21 Score=169.64 Aligned_cols=171 Identities=10% Similarity=0.048 Sum_probs=124.2
Q ss_pred eeEecC-CcccccCCCCccccccCcceeeeccccCCCCCcEEEEEEecCCCccccccCCcccCCCCcccCCCCCeeeeec
Q psy4579 45 TAQWLP-DVTSVQLPNEDAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQFDAS 123 (368)
Q Consensus 45 ~~~~~p-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~ 123 (368)
.-+|+| ||+++|+++. |.+ +.|+...+...... ....|.++.|.+++..+...+.+ .+..|++|+.++.....
T Consensus 7 ~~~fSP~dG~~~a~~~~-g~v--~v~d~~~~~~~~~~-~~~~v~~~~~spDg~~l~~~~~~--~g~~v~v~d~~~~~~~~ 80 (360)
T d1k32a3 7 AEDFSPLDGDLIAFVSR-GQA--FIQDVSGTYVLKVP-EPLRIRYVRRGGDTKVAFIHGTR--EGDFLGIYDYRTGKAEK 80 (360)
T ss_dssp EEEEEECGGGCEEEEET-TEE--EEECTTSSBEEECS-CCSCEEEEEECSSSEEEEEEEET--TEEEEEEEETTTCCEEE
T ss_pred cccccCCCCCEEEEEEC-CeE--EEEECCCCcEEEcc-CCCCEEEEEECCCCCEEEEEEcC--CCCEEEEEECCCCcEEE
Confidence 468999 9999999865 455 45555544333222 22347788887766655433311 23478999999888888
Q ss_pred cccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEe---
Q psy4579 124 NYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSA--- 200 (368)
Q Consensus 124 ~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~--- 200 (368)
+..|...|.+++|+|++ ++|++++.++.+++|++.++. ....+..|...+. +++|+|+ +.+|+.+
T Consensus 81 ~~~~~~~v~~~~~spdg-~~l~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~---~~~~spd-g~~la~~~~~ 148 (360)
T d1k32a3 81 FEENLGNVFAMGVDRNG-KFAVVANDRFEIMTVDLETGK-------PTVIERSREAMIT---DFTISDN-SRFIAYGFPL 148 (360)
T ss_dssp CCCCCCSEEEEEECTTS-SEEEEEETTSEEEEEETTTCC-------EEEEEECSSSCCC---CEEECTT-SCEEEEEEEE
T ss_pred eeCCCceEEeeeecccc-cccceeccccccccccccccc-------eeeeeeccccccc---chhhccc-eeeeeeeccc
Confidence 89999999999999999 999999999999999998874 4567778888885 9999999 8888754
Q ss_pred -------eCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee
Q psy4579 201 -------SDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR 241 (368)
Q Consensus 201 -------s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~ 241 (368)
..++.+++||+.++. ...+..+...+..+.|++
T Consensus 149 ~~~~~~~~~~~~~~v~d~~~~~--------~~~~~~~~~~~~~~~~sp 188 (360)
T d1k32a3 149 KHGETDGYVMQAIHVYDMEGRK--------IFAATTENSHDYAPAFDA 188 (360)
T ss_dssp CSSTTCSCCEEEEEEEETTTTE--------EEECSCSSSBEEEEEECT
T ss_pred cccceeeccccceeeeccccCc--------eeeecccccccccccccC
Confidence 345679999998762 122333445555566653
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.85 E-value=7.7e-21 Score=162.23 Aligned_cols=212 Identities=14% Similarity=0.106 Sum_probs=141.4
Q ss_pred eeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEE
Q psy4579 119 QFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLL 198 (368)
Q Consensus 119 ~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~ 198 (368)
+.+..+.+|.++|++|+|+| |+||+.||+|++||+.+. ..+|...|. ++++++ +..++
T Consensus 4 ~~i~~l~gH~~~I~~l~~s~-----l~sgs~Dg~v~~Wd~~~~------------~~~h~~~V~---~~~~~~--~~~~~ 61 (287)
T d1pgua2 4 EVLKTISGHNKGITALTVNP-----LISGSYDGRIMEWSSSSM------------HQDHSNLIV---SLDNSK--AQEYS 61 (287)
T ss_dssp EEEEEECCCSSCEEEEETTT-----TEEEETTSCEEETTTTEE------------ECCCCSCEE---EEECCS--TTCCE
T ss_pred ceeEEECCCCCceEEEEECc-----EEEEeCCCeEEEEECCCC------------CCCCCCCEE---EEEecC--CCeEE
Confidence 55678899999999999986 899999999999998643 357888885 999987 45689
Q ss_pred EeeCCCcEEEEECCCCCCCCcc---------------------------ccceeeeecccccEeEEEEeeecccccCCC-
Q psy4579 199 SASDDHTICLWDINATPKENRV---------------------------IDAKTIFTGHTAVVEDYSIHRLILGTHTSD- 250 (368)
Q Consensus 199 s~s~dg~i~iwd~~~~~~~~~~---------------------------~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d- 250 (368)
+++.|+++++|++......... ......+. +...+.++..+...+..+..+
T Consensus 62 s~s~D~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~ 140 (287)
T d1pgua2 62 SISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVR-LNSPGSAVSLSQNYVAVGLEEG 140 (287)
T ss_dssp EEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEE-CSSCEEEEEECSSEEEEEETTT
T ss_pred EEeeccccccccccccccccceeeeeeccCCceEEEeecccceeeeccceeeeeecc-ccceeeeeeccCcceeeecccc
Confidence 9999999999987643211000 00011111 112233333333233333332
Q ss_pred CccceEE------------------EEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCC
Q psy4579 251 EQNHLLI------------------ASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQN 312 (368)
Q Consensus 251 ~~~~~~~------------------~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~ 312 (368)
+.+++|. ..+.+.+++..+.+. ...+.+.+|+..++........+|...|.+++|+|.+
T Consensus 141 ~~v~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~g---~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~p~~ 217 (287)
T d1pgua2 141 NTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAG---DVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAE 217 (287)
T ss_dssp SCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEE---ETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC
T ss_pred ceeeeeeccccceeeeeeeccCCceeEEEeccCccccccc---cccccccceeecccccccccccccccccceeeecccc
Confidence 3455552 112222222222221 1345688888888887766556899999999999854
Q ss_pred ---------CcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeecccCceeeecceeee
Q psy4579 313 ---------PCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 313 ---------~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p~~ 365 (368)
..+|+||+.|++|++||++.. ...+..+.+|.+.|.+++|+|..
T Consensus 218 ~~~~~~~~~~~~l~sgs~D~~i~iw~~~~~---------~~~~~~~~~h~~~V~~v~~~~~~ 270 (287)
T d1pgua2 218 KGANEEEIEEDLVATGSLDTNIFIYSVKRP---------MKIIKALNAHKDGVNNLLWETPS 270 (287)
T ss_dssp ------CCSCCEEEEEETTSCEEEEESSCT---------TCCEEETTSSTTCEEEEEEEETT
T ss_pred cccccccCCCCeeEeecCCCeEEEEECCCC---------CeEEEEeCCCCCCeEEEEECCCC
Confidence 257899999999999999742 23445667999999999999863
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.83 E-value=9.7e-20 Score=158.09 Aligned_cols=208 Identities=15% Similarity=0.138 Sum_probs=140.0
Q ss_pred eeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEE
Q psy4579 120 FDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLS 199 (368)
Q Consensus 120 ~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s 199 (368)
....+.+|.+.|.+ +++++| ++||||+.||+|+|||+.+++ ++..+.+|.+.|. +++|+| ++|++
T Consensus 8 ~~~~l~GH~~~V~s-~~~~~g-~~l~sgs~Dg~i~vWd~~~~~-------~~~~~~~h~~~V~---~v~~~~---~~l~s 72 (342)
T d2ovrb2 8 SPKVLKGHDDHVIT-CLQFCG-NRIVSGSDDNTLKVWSAVTGK-------CLRTLVGHTGGVW---SSQMRD---NIIIS 72 (342)
T ss_dssp CCEEEECSTTSCEE-EEEEET-TEEEEEETTSCEEEEETTTCC-------EEEECCCCSSCEE---EEEEET---TEEEE
T ss_pred cCEEECCcCCceEE-EEEECC-CEEEEEeCCCeEEEEECCCCC-------EEEEEeCCCCCEE---EEEeCC---Ccccc
Confidence 34567899999865 356667 899999999999999998874 6788999999995 999986 48999
Q ss_pred eeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeeecccccCCCCccceEEEE-------eec--------CC
Q psy4579 200 ASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIAS-------VQL--------PN 264 (368)
Q Consensus 200 ~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~-------~~~--------~~ 264 (368)
|+.|+.+++|+..... .......+...+......+.....+..+..+.++... ... ..
T Consensus 73 ~s~D~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (342)
T d2ovrb2 73 GSTDRTLKVWNAETGE-------CIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY 145 (342)
T ss_dssp EETTSCEEEEETTTTE-------EEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE
T ss_pred ceeccccccccccccc-------ceecccccceeEeeeecccccccccccceeEEEeecccccceeeeecccccceeecc
Confidence 9999999999987752 2223333444444444443333333333333332110 000 00
Q ss_pred cccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCC
Q psy4579 265 EDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECH 344 (368)
Q Consensus 265 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~ 344 (368)
....+.. ....+.+.+++.........+. +|...+..+.+ ++ ..+++|+.||+|++||++. ..
T Consensus 146 ~~~~~~~---~~~d~~i~~~d~~~~~~~~~~~-~~~~~~~~~~~--~~-~~l~s~~~dg~i~~~d~~~----------~~ 208 (342)
T d2ovrb2 146 DGRRVVS---GAYDFMVKVWDPETETCLHTLQ-GHTNRVYSLQF--DG-IHVVSGSLDTSIRVWDVET----------GN 208 (342)
T ss_dssp CSSCEEE---EETTSCEEEEEGGGTEEEEEEC-CCSSCEEEEEE--CS-SEEEEEETTSCEEEEETTT----------CC
T ss_pred ccceeee---ecCCCeEEEeecccceeeEEEc-CcccccccccC--CC-CEEEEEeCCCeEEEeeccc----------ce
Confidence 0011111 1233456677777776666655 77776665554 55 5788999999999999975 45
Q ss_pred CceeeecccCceeeecceeeee
Q psy4579 345 PDLRLRGHQKEGLIEGTYNCYL 366 (368)
Q Consensus 345 ~~~~~~gh~~~V~~l~w~p~~~ 366 (368)
++..+.+|...|.+++|+|+++
T Consensus 209 ~~~~~~~~~~~v~~~~~~~~~l 230 (342)
T d2ovrb2 209 CIHTLTGHQSLTSGMELKDNIL 230 (342)
T ss_dssp EEEEECCCCSCEEEEEEETTEE
T ss_pred eeeEecccccceeEEecCCCEE
Confidence 5667889999999999998764
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.83 E-value=4.3e-20 Score=165.12 Aligned_cols=178 Identities=17% Similarity=0.196 Sum_probs=120.0
Q ss_pred cCceeeEecCC-----cccccCCCCccccccCcceeeeccccC-C----------------CCCcEEEEEEecCCCcccc
Q psy4579 41 WPSLTAQWLPD-----VTSVQLPNEDAQFDASNYDTDKGTHTS-D----------------EQNHLLIASVQLPNEDAQF 98 (368)
Q Consensus 41 ~~~~~~~~~p~-----~~~l~~~~~~~~~~~~~~~~~~~~~~~-~----------------~~~~~~i~~~~~~~~~~~~ 98 (368)
.....++|.++ +.++++++.||.+.+|+.......... . ......+.++.+.++. +
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg--~ 197 (393)
T d1sq9a_ 120 HSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG--L 197 (393)
T ss_dssp SCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS--E
T ss_pred CceEEEEEecCCCcccccEEEEEcCCCcEEEEEeecCCcccceeeeeeccceecccceecccCCCCcEEEEEECCCC--E
Confidence 34556777765 467888899999876654322110000 0 1111123344443332 2
Q ss_pred ccCCcccCCCCcccCCCCCe-ee------eeccccCCCCceeeEecCCCCCeeEEEeCCCc---EEEEeCCCCCCCCc--
Q psy4579 99 DASNYDTDKGGNVQLPNEDA-QF------DASNYDTDKGGYGLSWNPSLNGYLLSASDDHT---ICLWDINATPKENR-- 166 (368)
Q Consensus 99 ~~~~~~~~~~g~i~i~~~~~-~~------~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~---v~iwd~~~~~~~~~-- 166 (368)
.+++ +.||+|++|+... +. ...+.+|..+|++++|+|++ ++|++|+.|++ |++||++++.....
T Consensus 198 lasg---s~Dg~i~iwd~~~~~~~~~~~~~~~l~~h~~~V~~l~~spdg-~~l~sgs~D~t~~~i~lwd~~~g~~~~~l~ 273 (393)
T d1sq9a_ 198 IATG---FNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQG-SLLAIAHDSNSFGCITLYETEFGERIGSLS 273 (393)
T ss_dssp EEEE---CTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSST-TEEEEEEEETTEEEEEEEETTTCCEEEEEC
T ss_pred EEEE---eCCCcEEEEeecccccccccccccccccccceEEEccccccc-ceeeeecCCCCcceeeecccccceeeeeec
Confidence 2222 4699999999763 22 22456799999999999999 99999999875 89999987642111
Q ss_pred ----ccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEe
Q psy4579 167 ----VIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVE 235 (368)
Q Consensus 167 ----~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~ 235 (368)
.......+.+|.+.|. +++|+|+ +++|+|||.|++|+|||++++ .++..+.+|...|.
T Consensus 274 ~~~~~~~~~~~~~gH~~~V~---~l~fspd-~~~l~S~s~D~~v~vWd~~~g-------~~~~~l~gH~~~v~ 335 (393)
T d1sq9a_ 274 VPTHSSQASLGEFAHSSWVM---SLSFNDS-GETLCSAGWDGKLRFWDVKTK-------ERITTLNMHCDDIE 335 (393)
T ss_dssp BC--------CCBSBSSCEE---EEEECSS-SSEEEEEETTSEEEEEETTTT-------EEEEEEECCGGGCS
T ss_pred cccccccceeeeecccCcee---eeccCCC-CCeeEEECCCCEEEEEECCCC-------CEEEEECCcCCccc
Confidence 1112334568999996 9999998 999999999999999999988 56888999998875
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.80 E-value=9e-19 Score=151.59 Aligned_cols=232 Identities=9% Similarity=-0.050 Sum_probs=141.4
Q ss_pred eeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEE
Q psy4579 120 FDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLS 199 (368)
Q Consensus 120 ~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s 199 (368)
.+....+|++.|++|+|+|++ ++||+|+.||+|+|||++...... ......+|..+|. +++|+|+++.+|++
T Consensus 3 ~v~~~~~h~d~I~~l~fsp~~-~~L~s~s~Dg~v~iwd~~~~~~~~----~~~~~~~h~~~V~---~v~f~~~~~~~l~s 74 (342)
T d1yfqa_ 3 IVQIEQAPKDYISDIKIIPSK-SLLLITSWDGSLTVYKFDIQAKNV----DLLQSLRYKHPLL---CCNFIDNTDLQIYV 74 (342)
T ss_dssp EEECSSCCSSCEEEEEEEGGG-TEEEEEETTSEEEEEEEETTTTEE----EEEEEEECSSCEE---EEEEEESSSEEEEE
T ss_pred eEEcCCCCCCCEEEEEEeCCC-CEEEEEECCCeEEEEEccCCCcce----EEEEecCCCCCEE---EEEEeCCCCCEEEE
Confidence 344567899999999999998 899999999999999998754211 1233446999996 99999975678999
Q ss_pred eeCCCcEEEEECCCCCCCCccccceeeeecccccEe-EEEEe--eecccccCCCCccceEEEEe---------ecCCccc
Q psy4579 200 ASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVE-DYSIH--RLILGTHTSDEQNHLLIASV---------QLPNEDA 267 (368)
Q Consensus 200 ~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~-~v~~~--~~~~~~~~~d~~~~~~~~~~---------~~~~~~~ 267 (368)
|+.||.|++|++..... ......+..... ...+. ...+.+++.++...+|.... .......
T Consensus 75 g~~d~~v~~w~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~~~~~~ 147 (342)
T d1yfqa_ 75 GTVQGEILKVDLIGSPS-------FQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNT 147 (342)
T ss_dssp EETTSCEEEECSSSSSS-------EEECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSS
T ss_pred cccccceeeeecccccc-------cccccccccccccccccccccccccccccccccceeeccccccceeeecccccccc
Confidence 99999999999987632 222222222222 22222 23445555555555552110 0000000
Q ss_pred cc-----c------cccccCCCCCcccccCCCCceeee--eecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCC
Q psy4579 268 QF-----D------ASNYDTDKGDFGGFGSVSGKIEIE--IKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHP 334 (368)
Q Consensus 268 ~~-----~------~~~~d~~~~~~~~~~~~~~~~~~~--~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~ 334 (368)
.. . ........+.+..|++........ ....+...+.+..+.|.....+++++.||.+.+|++....
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~v~~~~~~~ 227 (342)
T d1yfqa_ 148 KVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQG 227 (342)
T ss_dssp SSCCCEEEEEECSSEEEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTC
T ss_pred cceeeeeeeeccCCceeeecCCCcEEEEecccCcccceeeeecccccceeeeEeecCCCCEEEeecCCCeEEEEEecCCc
Confidence 00 0 000011234455566554443222 2224556677777777665788899999999999987543
Q ss_pred CCCCCCC-----CCCCceeeecccCceeeecceeeee
Q psy4579 335 SKPDPNG-----ECHPDLRLRGHQKEGLIEGTYNCYL 366 (368)
Q Consensus 335 ~~~~~~~-----~~~~~~~~~gh~~~V~~l~w~p~~~ 366 (368)
....... .........+|...|.+++|+|+..
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~sp~~~ 264 (342)
T d1yfqa_ 228 DDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHK 264 (342)
T ss_dssp CSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTC
T ss_pred ceeeccccceeeeeeeccCCCcccccceeEEecCCcc
Confidence 3221110 0111122356888999999999753
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.74 E-value=1.5e-17 Score=145.56 Aligned_cols=214 Identities=7% Similarity=-0.039 Sum_probs=143.5
Q ss_pred CCcccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCCC--cEEEEeCCCCCCCCcccccceeeeccccceecce
Q psy4579 108 GGNVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDH--TICLWDINATPKENRVIDAKTIFTGHTAVVEVRY 185 (368)
Q Consensus 108 ~g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg--~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 185 (368)
.|.|.+|+.++...... .|...|.+++|+|+| +.|++++.+. .|++||.+++. ...+..|...+.
T Consensus 23 ~g~v~v~d~~~~~~~~~-~~~~~v~~~~~spDg-~~l~~~~~~~g~~v~v~d~~~~~--------~~~~~~~~~~v~--- 89 (360)
T d1k32a3 23 RGQAFIQDVSGTYVLKV-PEPLRIRYVRRGGDT-KVAFIHGTREGDFLGIYDYRTGK--------AEKFEENLGNVF--- 89 (360)
T ss_dssp TTEEEEECTTSSBEEEC-SCCSCEEEEEECSSS-EEEEEEEETTEEEEEEEETTTCC--------EEECCCCCCSEE---
T ss_pred CCeEEEEECCCCcEEEc-cCCCCEEEEEECCCC-CEEEEEEcCCCCEEEEEECCCCc--------EEEeeCCCceEE---
Confidence 68999999987655554 699999999999999 8887766553 79999998863 466778999985
Q ss_pred eeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeeecccccCCCCccceEEEEeecCCc
Q psy4579 186 GLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNE 265 (368)
Q Consensus 186 ~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 265 (368)
+++|+|+ +.+|++++.++.+++|++.++ .....+..|...+.+++|+|. + ..+...... ..
T Consensus 90 ~~~~spd-g~~l~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~spd--------g-~~la~~~~~-~~- 150 (360)
T d1k32a3 90 AMGVDRN-GKFAVVANDRFEIMTVDLETG-------KPTVIERSREAMITDFTISDN--------S-RFIAYGFPL-KH- 150 (360)
T ss_dssp EEEECTT-SSEEEEEETTSEEEEEETTTC-------CEEEEEECSSSCCCCEEECTT--------S-CEEEEEEEE-CS-
T ss_pred eeeeccc-ccccceecccccccccccccc-------ceeeeeecccccccchhhccc--------e-eeeeeeccc-cc-
Confidence 9999999 999999999999999999887 345667778888889999751 1 111111100 00
Q ss_pred ccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCC
Q psy4579 266 DAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHP 345 (368)
Q Consensus 266 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~ 345 (368)
.. ......+.+.+|+..+++... .. .|...+..++|+|+| ..|++++.|+.+++||......... ....
T Consensus 151 ---~~--~~~~~~~~~~v~d~~~~~~~~-~~-~~~~~~~~~~~spdg-~~l~~~s~~~~~~~~d~~~~~~~~~---~~~~ 219 (360)
T d1k32a3 151 ---GE--TDGYVMQAIHVYDMEGRKIFA-AT-TENSHDYAPAFDADS-KNLYYLSYRSLDPSPDRVVLNFSFE---VVSK 219 (360)
T ss_dssp ---ST--TCSCCEEEEEEEETTTTEEEE-CS-CSSSBEEEEEECTTS-CEEEEEESCCCCCEECSSSSCEECC---SCBE
T ss_pred ---cc--eeeccccceeeeccccCceee-ec-ccccccccccccCCC-CEEEEEeCCCceEcccccccceeec---cccc
Confidence 00 000111123344444444332 22 577788999999999 5777999999999999764321110 0111
Q ss_pred ceeeecccCceeeecceee
Q psy4579 346 DLRLRGHQKEGLIEGTYNC 364 (368)
Q Consensus 346 ~~~~~gh~~~V~~l~w~p~ 364 (368)
...+..|...+..+.|+|.
T Consensus 220 ~~~~~~~~~~~~~~~~s~~ 238 (360)
T d1k32a3 220 PFVIPLIPGSPNPTKLVPR 238 (360)
T ss_dssp EEEEESSTTCCCGGGCCCG
T ss_pred eEEEecccCccccceECCC
Confidence 1223345555555666554
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Probab=99.73 E-value=5.4e-17 Score=138.45 Aligned_cols=263 Identities=13% Similarity=0.109 Sum_probs=163.8
Q ss_pred hhhhhhhhhcCcchheeecccccccCceeeEecCCccccc-CCCCccccccCcceeeeccccCCCCCcEEEEEEecCCCc
Q psy4579 17 NEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQ-LPNEDAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNED 95 (368)
Q Consensus 17 ~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 95 (368)
+...++|...+..+...+.. ...+..++|+|||++|+ +++.++.+.+| ++..+......+.......+.+.+.+
T Consensus 11 ~~~v~v~D~~t~~~~~~i~~---g~~p~~va~spdG~~l~v~~~~~~~i~v~--d~~t~~~~~~~~~~~~~~~~~~~~~~ 85 (301)
T d1l0qa2 11 SDNISVIDVTSNKVTATIPV---GSNPMGAVISPDGTKVYVANAHSNDVSII--DTATNNVIATVPAGSSPQGVAVSPDG 85 (301)
T ss_dssp TTEEEEEETTTTEEEEEEEC---SSSEEEEEECTTSSEEEEEEGGGTEEEEE--ETTTTEEEEEEECSSSEEEEEECTTS
T ss_pred CCEEEEEECCCCeEEEEEEC---CCCceEEEEeCCCCEEEEEECCCCEEEEE--ECCCCceeeeeecccccccccccccc
Confidence 34567888877765555533 33456799999999874 56677777544 54444433321111123344454444
Q ss_pred cccccCCcccCCCCcccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeee
Q psy4579 96 AQFDASNYDTDKGGNVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFT 175 (368)
Q Consensus 96 ~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~ 175 (368)
..+.... ..++.+.+|+...........+.....++.|+|++..+++++..++.+.+|+..+.. ....+.
T Consensus 86 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~ 155 (301)
T d1l0qa2 86 KQVYVTN---MASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKA-------VINTVS 155 (301)
T ss_dssp SEEEEEE---TTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTE-------EEEEEE
T ss_pred ccccccc---cccceeeecccccceeeeeccccccceEEEeecCCCeeeeeeccccceeeeeccccc-------eeeecc
Confidence 3333322 346788888887665555666777889999999995556677788999999998764 344555
Q ss_pred ccccceecceeeEEeCCCCCeEEEeeCC-CcEEEEECCCCCCCCccccceeeeecccccEeEEEEeeecccccCCCCccc
Q psy4579 176 GHTAVVEVRYGLSWNPSLNGYLLSASDD-HTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNH 254 (368)
Q Consensus 176 ~h~~~v~~~~~i~~~p~~~~~l~s~s~d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~ 254 (368)
.+..+. .+.++|+ +..+++++.+ +.+.+|+.... ....... .......+++.+. ...
T Consensus 156 ~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~-~~~~~~~~~~~~~---------g~~ 213 (301)
T d1l0qa2 156 VGRSPK----GIAVTPD-GTKVYVANFDSMSISVIDTVTN-------SVIDTVK-VEAAPSGIAVNPE---------GTK 213 (301)
T ss_dssp CCSSEE----EEEECTT-SSEEEEEETTTTEEEEEETTTT-------EEEEEEE-CSSEEEEEEECTT---------SSE
T ss_pred cCCCce----EEEeecc-ccceeeecccccccccccccce-------eeeeccc-ccCCcceeecccc---------ccc
Confidence 454433 8999998 6666666554 66777776654 1222232 2233444555420 011
Q ss_pred eEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCC
Q psy4579 255 LLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
+++. ..+...+.+..||..+++....+. +...+.+++|+|+|.+++++++.|++|++||+.+
T Consensus 214 ~~v~--------------~~~~~~~~v~v~D~~t~~~~~~~~--~~~~~~~va~spdg~~l~va~~~~~~i~v~D~~t 275 (301)
T d1l0qa2 214 AYVT--------------NVDKYFNTVSMIDTGTNKITARIP--VGPDPAGIAVTPDGKKVYVALSFCNTVSVIDTAT 275 (301)
T ss_dssp EEEE--------------EECSSCCEEEEEETTTTEEEEEEE--CCSSEEEEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred cccc--------------cccceeeeeeeeecCCCeEEEEEc--CCCCEEEEEEeCCCCEEEEEECCCCeEEEEECCC
Confidence 1111 122233345556666677665554 3456899999999977778999999999999975
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.72 E-value=2.4e-17 Score=148.63 Aligned_cols=102 Identities=18% Similarity=0.049 Sum_probs=75.4
Q ss_pred CCCcccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceeccee
Q psy4579 107 KGGNVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYG 186 (368)
Q Consensus 107 ~~g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 186 (368)
.||+|++||.....+...+.+...+..++|||+| ++|++++.||+|++||+.+++.... ..+....+|.+.+ ++
T Consensus 40 ~dg~v~vwD~~t~~~~~~l~~g~~~~~vafSPDG-k~l~~~~~d~~v~vwd~~t~~~~~~--~~i~~~~~~~~~~---~s 113 (426)
T d1hzua2 40 DAGQIALVDGDSKKIVKVIDTGYAVHISRMSASG-RYLLVIGRDARIDMIDLWAKEPTKV--AEIKIGIEARSVE---SS 113 (426)
T ss_dssp TTTEEEEEETTTCSEEEEEECCSSEEEEEECTTS-CEEEEEETTSEEEEEETTSSSCEEE--EEEECCSEEEEEE---EC
T ss_pred CCCEEEEEECCCCcEEEEEeCCCCeeEEEECCCC-CEEEEEeCCCCEEEEEccCCceeEE--EEEeCCCCCcceE---Ee
Confidence 5899999999764444334344579999999999 9999999999999999988753110 0112233566655 48
Q ss_pred eEEeCCCCCeE-EEeeCCCcEEEEECCCCC
Q psy4579 187 LSWNPSLNGYL-LSASDDHTICLWDINATP 215 (368)
Q Consensus 187 i~~~p~~~~~l-~s~s~dg~i~iwd~~~~~ 215 (368)
++|+|+ ++++ +++..++.+++||..+..
T Consensus 114 ~~~spD-G~~l~v~~~~~~~v~i~d~~~~~ 142 (426)
T d1hzua2 114 KFKGYE-DRYTIAGAYWPPQFAIMDGETLE 142 (426)
T ss_dssp CSTTCT-TTEEEEEEEESSEEEEEETTTCC
T ss_pred eeecCC-CCEEEEeecCCCeEEEEcCCccc
Confidence 899999 6665 566689999999998863
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Probab=99.61 E-value=2.6e-15 Score=135.32 Aligned_cols=196 Identities=12% Similarity=0.049 Sum_probs=123.8
Q ss_pred CCCCcccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecce
Q psy4579 106 DKGGNVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRY 185 (368)
Q Consensus 106 ~~~g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 185 (368)
+.+|+|.+||..+..+...+.....+..++|||+| +++++++.||+|++||+.+++... ...+....+|.+.+ +
T Consensus 39 ~d~g~v~v~D~~t~~v~~~~~~g~~~~~v~fSpDG-~~l~~~s~dg~v~~~d~~t~~~~~--~~~i~~~~~~~~~~---~ 112 (432)
T d1qksa2 39 RDAGQIALIDGSTYEIKTVLDTGYAVHISRLSASG-RYLFVIGRDGKVNMIDLWMKEPTT--VAEIKIGSEARSIE---T 112 (432)
T ss_dssp TTTTEEEEEETTTCCEEEEEECSSCEEEEEECTTS-CEEEEEETTSEEEEEETTSSSCCE--EEEEECCSEEEEEE---E
T ss_pred cCCCEEEEEECCCCcEEEEEeCCCCeeEEEECCCC-CEEEEEcCCCCEEEEEeeCCCceE--EEEEecCCCCCCeE---E
Confidence 35899999999864444433333579999999999 999999999999999998764211 00122233565555 4
Q ss_pred eeEEeCCCCCe-EEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee--ecc-cccCCCCccceEEEEee
Q psy4579 186 GLSWNPSLNGY-LLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LIL-GTHTSDEQNHLLIASVQ 261 (368)
Q Consensus 186 ~i~~~p~~~~~-l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~-~~~~~d~~~~~~~~~~~ 261 (368)
+..|+|| +++ +++++.+++|++||..++ .+...+..+...+....+.+ ... ...+
T Consensus 113 s~~~SpD-G~~l~vs~~~~~~v~i~d~~t~-------~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s------------- 171 (432)
T d1qksa2 113 SKMEGWE-DKYAIAGAYWPPQYVIMDGETL-------EPKKIQSTRGMTYDEQEYHPEPRVAAILAS------------- 171 (432)
T ss_dssp CCSTTCT-TTEEEEEEEETTEEEEEETTTC-------CEEEEEECCEECTTTCCEESCCCEEEEEEC-------------
T ss_pred ecccCCC-CCEEEEEcCCCCeEEEEeCccc-------cceeeeccCCccccceeccCCCceeEEEEC-------------
Confidence 7788998 665 588899999999999887 34555555544443333321 000 0001
Q ss_pred cCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCC
Q psy4579 262 LPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 262 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
.++..+.+... ..+.+..++..+++........+...+..++|+|+|.+++++...+..+.++|...
T Consensus 172 --~dg~~~~vs~~--~~~~i~~~d~~~~~~~~~~~i~~g~~~~~~~~spdg~~~~va~~~~~~v~v~d~~~ 238 (432)
T d1qksa2 172 --HYRPEFIVNVK--ETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKE 238 (432)
T ss_dssp --SSSSEEEEEET--TTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTT
T ss_pred --CCCCEEEEEEc--cCCeEEEEEccCCCcceEEEEcccCccccceECCCCCEEEEeccccceEEEeeccc
Confidence 11111111111 12334444444444333333345667889999999977777777788999999875
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.61 E-value=2.6e-15 Score=135.17 Aligned_cols=301 Identities=12% Similarity=0.058 Sum_probs=158.5
Q ss_pred hhhhhhhhhhcCcchheeecccccccCceeeEecCCcccccCCCCccccccCcceeeeccccCC----CCCcEEEEEEec
Q psy4579 16 INEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSD----EQNHLLIASVQL 91 (368)
Q Consensus 16 ~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~i~~~~~ 91 (368)
.+.+.++|...+..+...+... -.+..++|+|||+++++++.|+.+.+|+.+......... ......+.++.+
T Consensus 40 ~dg~v~vwD~~t~~~~~~l~~g---~~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~~~~~~i~~~~~~~~~~~s~~~ 116 (426)
T d1hzua2 40 DAGQIALVDGDSKKIVKVIDTG---YAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFK 116 (426)
T ss_dssp TTTEEEEEETTTCSEEEEEECC---SSEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEEEEECCST
T ss_pred CCCEEEEEECCCCcEEEEEeCC---CCeeEEEECCCCCEEEEEeCCCCEEEEEccCCceeEEEEEeCCCCCcceEEeeee
Confidence 3567888999888777777654 236789999999999999999988666544332222111 112233445555
Q ss_pred CCCccccccCCcccCCCCcccCCCCCee-eeeccccCCCCceeeEecCCCCCeeEEEeCCCc-----------EEEEeCC
Q psy4579 92 PNEDAQFDASNYDTDKGGNVQLPNEDAQ-FDASNYDTDKGGYGLSWNPSLNGYLLSASDDHT-----------ICLWDIN 159 (368)
Q Consensus 92 ~~~~~~~~~~~~~~~~~g~i~i~~~~~~-~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~-----------v~iwd~~ 159 (368)
.+++..+.++.+ .++.+.+|+.... .......|...+....+.+++....+.++.|+. +.+++..
T Consensus 117 spDG~~l~v~~~---~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~d~~~~~~~~~~~~~i~~~~~~ 193 (426)
T d1hzua2 117 GYEDRYTIAGAY---WPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYK 193 (426)
T ss_dssp TCTTTEEEEEEE---ESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECS
T ss_pred cCCCCEEEEeec---CCCeEEEEcCCccceeEEeeccCCCccceeecCCCceeEEEECCCCCEEEEecCCCCeEEEEEec
Confidence 555555444432 3788999987653 333334444444444454444223334444444 4444333
Q ss_pred CCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEe-eCCCcEEEEECCCCCCCCcc--------ccceeeeecc
Q psy4579 160 ATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSA-SDDHTICLWDINATPKENRV--------IDAKTIFTGH 230 (368)
Q Consensus 160 ~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~-s~dg~i~iwd~~~~~~~~~~--------~~~~~~~~~~ 230 (368)
.... ......++...+. .+.|+|+ +.+++++ ..+..+.++|..++...... .........+
T Consensus 194 ~~~~------~~~~~~~~~~~~~---~~~~~~~-g~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (426)
T d1hzua2 194 DIDN------LTVTSIGAAPFLA---DGGWDSS-HRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPK 263 (426)
T ss_dssp SSSS------CEEEEEECCSSEE---EEEECTT-SCEEEEEETTCSEEEEEETTTTEEEEEEECSSCCCCSCCEEEEETT
T ss_pred cccc------eeeEEeccCCccE---eeeECCC-CcEEEeeeecccceeeeecccccEEEEeccCCcccccceeeeecCC
Confidence 3211 1223334555553 8999998 5654444 56677889988775321000 0011111122
Q ss_pred cccEeEEEEee--ecccccCCCCccce--------------EEEEeecCCcccccccccc---c-CCCCCcccccCCCCc
Q psy4579 231 TAVVEDYSIHR--LILGTHTSDEQNHL--------------LIASVQLPNEDAQFDASNY---D-TDKGDFGGFGSVSGK 290 (368)
Q Consensus 231 ~~~v~~v~~~~--~~~~~~~~d~~~~~--------------~~~~~~~~~~~~~~~~~~~---d-~~~~~~~~~~~~~~~ 290 (368)
...+......+ .+...+........ .+..+.+.+++..+.+..- + ...+.+.+|+..+++
T Consensus 264 ~~~~~~~~~~~d~~v~~~~~~~~~~~~~~~~~~~~l~g~~~~v~~v~~sPdg~~l~v~~~~~~s~~~~~tv~vwd~~t~~ 343 (426)
T d1hzua2 264 YGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLD 343 (426)
T ss_dssp TEEEEEEECTTTCEEEEEECCTTTCTTTBTSEEEEEECSSSCCCCEECCTTCSEEEECCTTCSSHHHHTCEEEEETTCTT
T ss_pred CCceEEeccCCCceEEEeeccccccccccceEeEEEecCCCceeEEEcCCCCceEEEeecCCCCcccCCEEEEEECCCCC
Confidence 22333333221 11111111100000 0111223333333322100 0 012346777777776
Q ss_pred eeeeee--------cCcccceeEEEEeCCCCcEEEEe----cCCCeEEEEECCC
Q psy4579 291 IEIEIK--------INHEGEVNRARYMPQNPCVIATK----TPSSDVLVFDYTK 332 (368)
Q Consensus 291 ~~~~~~--------~~h~~~i~~~~~~p~~~~~lasg----s~Dg~i~iwd~~~ 332 (368)
...++. ..|...|..++|+|+|.++++++ +.||.|+|||.++
T Consensus 344 ~~~~~~~~~~~~~~~~~~~rv~~~~fSpDGk~i~vs~~~~~~~~~~i~v~D~~T 397 (426)
T d1hzua2 344 AKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKT 397 (426)
T ss_dssp SCCEEECHHHHHCCCSSCCCEEEEEECSSSSEEEEEECCCTTSCCEEEEEETTT
T ss_pred cCeEEeccchhcccCCCCccEEEEEECCCCCEEEEEEecCCCCCCeEEEEECCC
Confidence 654432 14566799999999997776663 5689999999986
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Probab=99.55 E-value=4e-15 Score=134.01 Aligned_cols=181 Identities=9% Similarity=0.039 Sum_probs=117.6
Q ss_pred hhhhhhhhhcCcchheeecccccccCceeeEecCCcccccCCCCccccccCcceeeeccccCC---CCC-cEEEEEEecC
Q psy4579 17 NEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSD---EQN-HLLIASVQLP 92 (368)
Q Consensus 17 ~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~i~~~~~~ 92 (368)
+.+..+|...+..+...+.... .+..++|+|||+++++++.|+.+.+|+.+......... ..+ .-.+.+..+.
T Consensus 41 ~g~v~v~D~~t~~v~~~~~~g~---~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~~~~~i~~~~~~~~~~~s~~~S 117 (432)
T d1qksa2 41 AGQIALIDGSTYEIKTVLDTGY---AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEG 117 (432)
T ss_dssp TTEEEEEETTTCCEEEEEECSS---CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEEEECCSTT
T ss_pred CCEEEEEECCCCcEEEEEeCCC---CeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCceEEEEEecCCCCCCeEEecccC
Confidence 4566788888887777776552 46789999999999999999998666543332212111 111 2233444455
Q ss_pred CCccccccCCcccCCCCcccCCCCCee-eeec-----------cccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCC
Q psy4579 93 NEDAQFDASNYDTDKGGNVQLPNEDAQ-FDAS-----------NYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINA 160 (368)
Q Consensus 93 ~~~~~~~~~~~~~~~~g~i~i~~~~~~-~~~~-----------~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~ 160 (368)
+++..+.++++ .++.|++||.... .... ...+......+.++|++..++++...++.|.+||..+
T Consensus 118 pDG~~l~vs~~---~~~~v~i~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~~~vs~~~~~~i~~~d~~~ 194 (432)
T d1qksa2 118 WEDKYAIAGAY---WPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTD 194 (432)
T ss_dssp CTTTEEEEEEE---ETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTC
T ss_pred CCCCEEEEEcC---CCCeEEEEeCccccceeeeccCCccccceeccCCCceeEEEECCCCCEEEEEEccCCeEEEEEccC
Confidence 55555544443 3789999997642 2222 2335566778899999855667778889999999876
Q ss_pred CCCCCcccccceeee-ccccceecceeeEEeCCCCCeEEEee-CCCcEEEEECCCC
Q psy4579 161 TPKENRVIDAKTIFT-GHTAVVEVRYGLSWNPSLNGYLLSAS-DDHTICLWDINAT 214 (368)
Q Consensus 161 ~~~~~~~~~~~~~~~-~h~~~v~~~~~i~~~p~~~~~l~s~s-~dg~i~iwd~~~~ 214 (368)
.+. ..... .+...+ .+++|+|+ +.++++++ .++.+.++|..+.
T Consensus 195 ~~~-------~~~~~i~~g~~~---~~~~~spd-g~~~~va~~~~~~v~v~d~~~~ 239 (432)
T d1qksa2 195 LNN-------LKTTEISAERFL---HDGGLDGS-HRYFITAANARNKLVVIDTKEG 239 (432)
T ss_dssp SSE-------EEEEEEECCSSE---EEEEECTT-SCEEEEEEGGGTEEEEEETTTT
T ss_pred CCc-------ceEEEEcccCcc---ccceECCC-CCEEEEeccccceEEEeecccc
Confidence 532 12222 233334 38999999 77665555 5568889998775
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Probab=99.55 E-value=2e-13 Score=115.77 Aligned_cols=225 Identities=8% Similarity=0.085 Sum_probs=136.8
Q ss_pred CCCCcccCCCCCeeeeeccccCCCCceeeEecCCCCCee-EEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecc
Q psy4579 106 DKGGNVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYL-LSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVR 184 (368)
Q Consensus 106 ~~~g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l-asg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~ 184 (368)
..+++|.+||.+...+.........+..++|+|+| ++| ++++.++.|++||+.++. .+..+..+..+.
T Consensus 9 ~~~~~v~v~D~~t~~~~~~i~~g~~p~~va~spdG-~~l~v~~~~~~~i~v~d~~t~~-------~~~~~~~~~~~~--- 77 (301)
T d1l0qa2 9 SESDNISVIDVTSNKVTATIPVGSNPMGAVISPDG-TKVYVANAHSNDVSIIDTATNN-------VIATVPAGSSPQ--- 77 (301)
T ss_dssp TTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTS-SEEEEEEGGGTEEEEEETTTTE-------EEEEEECSSSEE---
T ss_pred CCCCEEEEEECCCCeEEEEEECCCCceEEEEeCCC-CEEEEEECCCCEEEEEECCCCc-------eeeeeecccccc---
Confidence 35889999998765555555666778899999999 655 677889999999998864 456677776654
Q ss_pred eeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee---ecccccCCCCccceEE----
Q psy4579 185 YGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR---LILGTHTSDEQNHLLI---- 257 (368)
Q Consensus 185 ~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~---~~~~~~~~d~~~~~~~---- 257 (368)
.+.|++++...++++..++.+.+||..++ .....+. +.....++.+++ .++.+...+....++.
T Consensus 78 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~-~~~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~ 148 (301)
T d1l0qa2 78 -GVAVSPDGKQVYVTNMASSTLSVIDTTSN-------TVAGTVK-TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTK 148 (301)
T ss_dssp -EEEECTTSSEEEEEETTTTEEEEEETTTT-------EEEEEEE-CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTT
T ss_pred -ccccccccccccccccccceeeecccccc-------eeeeecc-ccccceEEEeecCCCeeeeeeccccceeeeecccc
Confidence 89999984446667778889999999876 2334444 334456677754 2333333333333221
Q ss_pred ---E---------EeecCCcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEe--cCCC
Q psy4579 258 ---A---------SVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATK--TPSS 323 (368)
Q Consensus 258 ---~---------~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasg--s~Dg 323 (368)
. .+.+.++...+.+...+ .+....+........... .+...+..++|++++..+++++ ..++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~v~~~~~~~~ 224 (301)
T d1l0qa2 149 AVINTVSVGRSPKGIAVTPDGTKVYVANFD--SMSISVIDTVTNSVIDTV--KVEAAPSGIAVNPEGTKAYVTNVDKYFN 224 (301)
T ss_dssp EEEEEEECCSSEEEEEECTTSSEEEEEETT--TTEEEEEETTTTEEEEEE--ECSSEEEEEEECTTSSEEEEEEECSSCC
T ss_pred ceeeecccCCCceEEEeeccccceeeeccc--ccccccccccceeeeecc--cccCCcceeeccccccccccccccceee
Confidence 0 11111222222111111 111222222333322222 2445677899999996665443 4457
Q ss_pred eEEEEECCCCCCCCCCCCCCCCceeeecccCceeeecceeee
Q psy4579 324 DVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 324 ~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p~~ 365 (368)
+|++||... ......+ .+...+++++|+|..
T Consensus 225 ~v~v~D~~t----------~~~~~~~-~~~~~~~~va~spdg 255 (301)
T d1l0qa2 225 TVSMIDTGT----------NKITARI-PVGPDPAGIAVTPDG 255 (301)
T ss_dssp EEEEEETTT----------TEEEEEE-ECCSSEEEEEECTTS
T ss_pred eeeeeecCC----------CeEEEEE-cCCCCEEEEEEeCCC
Confidence 899999975 2222333 334568999999864
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.53 E-value=4.9e-14 Score=121.53 Aligned_cols=263 Identities=7% Similarity=-0.022 Sum_probs=147.7
Q ss_pred hhhhhhhhhcCcchheeecccccccCceeeEecCCcccc-cCCCCccccccCcceeeeccccCC----CCC--cEEEEEE
Q psy4579 17 NEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSV-QLPNEDAQFDASNYDTDKGTHTSD----EQN--HLLIASV 89 (368)
Q Consensus 17 ~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~----~~~--~~~i~~~ 89 (368)
+...++|...+..+...+.......-+.+++|+|||+++ ++++.++.+.+|+ +..+..... ... ...+..+
T Consensus 10 d~~v~v~D~~s~~~~~~i~~~~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D--~~t~~~~~~~~~~~~~~~~~~~~~v 87 (337)
T d1pbyb_ 10 PDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKID--LVTGETLGRIDLSTPEERVKSLFGA 87 (337)
T ss_dssp TTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEE--TTTCCEEEEEECCBTTEEEECTTCE
T ss_pred CCEEEEEECCCCeEEEEEECCCCCCCccEEEECCCCCEEEEEECCCCeEEEEE--CCCCcEEEEEecCCCcccccceeeE
Confidence 456788888888777766655554456689999999987 5567888885554 433332211 000 0011223
Q ss_pred ecCCCccccccCCc--------ccCCCCcccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCC
Q psy4579 90 QLPNEDAQFDASNY--------DTDKGGNVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINAT 161 (368)
Q Consensus 90 ~~~~~~~~~~~~~~--------~~~~~g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~ 161 (368)
.+.+....+..... ....++.+.+|+...........+...+.+++|+|+| .++++++. .+.+||..++
T Consensus 88 ~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~s~dg-~~l~~~~~--~~~~~d~~~~ 164 (337)
T d1pbyb_ 88 ALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDG-SKLYGLGR--DLHVMDPEAG 164 (337)
T ss_dssp EECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTS-SCEEEESS--SEEEEETTTT
T ss_pred EEcCCCcEEEEeecCCcceeeeccccccceeeccccCCeEEEeccccCCceEEEEcCCC-CEEEEEcC--CcceeeeecC
Confidence 33333322222211 1124566777777765555556677789999999999 88888764 4778998876
Q ss_pred CCCCcccccceeeeccccceecceeeEEeCCC-----------------------CCeEEEeeCCCcEEEEECCCCCCCC
Q psy4579 162 PKENRVIDAKTIFTGHTAVVEVRYGLSWNPSL-----------------------NGYLLSASDDHTICLWDINATPKEN 218 (368)
Q Consensus 162 ~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~-----------------------~~~l~s~s~dg~i~iwd~~~~~~~~ 218 (368)
. ....+..+.... ...+.|+. ...+..++.++.+.+||...+..
T Consensus 165 ~-------~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 231 (337)
T d1pbyb_ 165 T-------LVEDKPIQSWEA----ETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEM-- 231 (337)
T ss_dssp E-------EEEEECSTTTTT----TTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCE--
T ss_pred c-------EEEEeecCCccc----cceecCCcceeeccccccceeeeeeeeeeeccceeeecccCccEEEEEcCCCcE--
Confidence 3 122222222211 22222221 11122233344566666655421
Q ss_pred ccccceeeeecccccEeEEEEeeecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCceeeeeecC
Q psy4579 219 RVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKIN 298 (368)
Q Consensus 219 ~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 298 (368)
....+..+...+..+.+++. ...++.. .+.+..||..+++....+.
T Consensus 232 ----~~~~~~~~~~~~~~~~~~~~---------~~~~~~~-------------------~~~i~v~d~~~~~~~~~~~-- 277 (337)
T d1pbyb_ 232 ----AMREVRIMDVFYFSTAVNPA---------KTRAFGA-------------------YNVLESFDLEKNASIKRVP-- 277 (337)
T ss_dssp ----EEEEEEECSSCEEEEEECTT---------SSEEEEE-------------------ESEEEEEETTTTEEEEEEE--
T ss_pred ----EEEEecCCCcceEEEEeccc---------ceEEEEc-------------------cccEEEEECCCCcEEEEEc--
Confidence 11122233333333443320 0111110 1234556666777666654
Q ss_pred cccceeEEEEeCCCCcEEEEecCCCeEEEEECCC
Q psy4579 299 HEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 299 h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
+...+.+++|+|+| ..|++++.|++|++||...
T Consensus 278 ~~~~~~~~~~s~dG-~~l~v~~~~~~i~v~D~~t 310 (337)
T d1pbyb_ 278 LPHSYYSVNVSTDG-STVWLGGALGDLAAYDAET 310 (337)
T ss_dssp CSSCCCEEEECTTS-CEEEEESBSSEEEEEETTT
T ss_pred CCCCEEEEEECCCC-CEEEEEeCCCcEEEEECCC
Confidence 56778999999999 5666889999999999975
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Probab=99.48 E-value=5.8e-14 Score=121.13 Aligned_cols=189 Identities=13% Similarity=0.143 Sum_probs=110.3
Q ss_pred hhhhhhhhhcCcchheeecccccccCceeeEecCCccccc-CCCCccccccCcceeeeccccC--CCCCcEEEEEEecCC
Q psy4579 17 NEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQ-LPNEDAQFDASNYDTDKGTHTS--DEQNHLLIASVQLPN 93 (368)
Q Consensus 17 ~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~~~~~ 93 (368)
++..++|+.+....+..+....++-++..++|+|||++|. ++..++.+.+|..+...+.... ..........+.+.+
T Consensus 13 ~~~I~v~~~~~~~~l~~~~~~~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~~~~~~~~~~~~p~~l~~sp 92 (333)
T d1ri6a_ 13 SQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTHISTDH 92 (333)
T ss_dssp GTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCSEEEECT
T ss_pred CCcEEEEEEcCCCCeEEEEEEcCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCcEEEeeecccCCCceEEEEcC
Confidence 4567889887655444454455667788999999999984 4566788765544322111110 000001122355555
Q ss_pred CccccccCCcccCCCCcccCCCCCe---eeeeccccCCCCceeeEecCCCCCeeEEEe-CCCcEEEEeCCCCCCCCcccc
Q psy4579 94 EDAQFDASNYDTDKGGNVQLPNEDA---QFDASNYDTDKGGYGLSWNPSLNGYLLSAS-DDHTICLWDINATPKENRVID 169 (368)
Q Consensus 94 ~~~~~~~~~~~~~~~g~i~i~~~~~---~~~~~~~~h~~~v~~l~~sp~~~~~lasg~-~dg~v~iwd~~~~~~~~~~~~ 169 (368)
++..+..+.+ .++.+.+|+.+. ........+...+.++.++|++ +.+++++ .+..|.+|+...........
T Consensus 93 Dg~~l~v~~~---~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~d~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~- 167 (333)
T d1ri6a_ 93 QGQFVFVGSY---NAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDN-RTLWVPALKQDRICLFTVSDDGHLVAQD- 167 (333)
T ss_dssp TSSEEEEEET---TTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTS-SEEEEEEGGGTEEEEEEECTTSCEEEEE-
T ss_pred CCCEEeeccc---CCCceeeeccccccceecccccCCCccceEEEeeecc-eeeeccccccceeeEEEeccCCcceeee-
Confidence 5554444432 367787776543 2334455677889999999999 6666655 56679999987653211000
Q ss_pred cceeeeccccceecceeeEEeCCCCCeE-EEeeCCCcEEEEECCCC
Q psy4579 170 AKTIFTGHTAVVEVRYGLSWNPSLNGYL-LSASDDHTICLWDINAT 214 (368)
Q Consensus 170 ~~~~~~~h~~~v~~~~~i~~~p~~~~~l-~s~s~dg~i~iwd~~~~ 214 (368)
............. .++|+++ +..+ .+....+...+|+....
T Consensus 168 ~~~~~~~~g~~p~---~i~~~~~-~~~~~~~~~~~~~~~v~~~~~~ 209 (333)
T d1ri6a_ 168 PAEVTTVEGAGPR---HMVFHPN-EQYAYCVNELNSSVDVWELKDP 209 (333)
T ss_dssp EEEEECSTTCCEE---EEEECTT-SSEEEEEETTTTEEEEEESSCT
T ss_pred ceeeeeecCCCcc---EEEEecc-ceeEEeeccccCceEEEeeccc
Confidence 0001111222232 8999998 5554 45556778888887654
|
| >d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]
Probab=99.46 E-value=1.7e-12 Score=113.82 Aligned_cols=296 Identities=8% Similarity=-0.005 Sum_probs=159.0
Q ss_pred cccccCceeeEecCCcccccCC---CCccccccCcceeeeccccCCCCCcEEEEEEecCCCccccccCCcc------cCC
Q psy4579 37 HALEWPSLTAQWLPDVTSVQLP---NEDAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYD------TDK 107 (368)
Q Consensus 37 ~~~~~~~~~~~~~p~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~------~~~ 107 (368)
...+.|+.+++++||++++.+. +.++...+|.++...+.......... ...+.|.++...+...... ...
T Consensus 17 ~~~~~p~~~~a~spdg~~~~~~~~~~~~~~~~v~v~D~~tg~~~~~~~~~~-~~~~a~SpDG~~l~va~~~~~~~~~~~~ 95 (373)
T d2madh_ 17 GAADGPTNDEAPGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGF-LPNPVAAHSGSEFALASTSFSRIAKGKR 95 (373)
T ss_pred ccCCCCccccccCCCCCEEEEEcccccCCCceEEEEECCCCCEEEEEeCCC-CccEEEcCCCCEEEEEeecCCccccccc
Confidence 4567899999999999998653 33344445777766665443311111 1134565555554443321 235
Q ss_pred CCcccCCCCCeee-eeccccCCCCc-------eeeEecCCCCCeeEEE--eCCCcEEEEeCCCCCCCCcccccceeeecc
Q psy4579 108 GGNVQLPNEDAQF-DASNYDTDKGG-------YGLSWNPSLNGYLLSA--SDDHTICLWDINATPKENRVIDAKTIFTGH 177 (368)
Q Consensus 108 ~g~i~i~~~~~~~-~~~~~~h~~~v-------~~l~~sp~~~~~lasg--~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h 177 (368)
++.|.+||..... ......+.... ..+.|+|++ +.++.. ..++.+.+|+..... ...+
T Consensus 96 ~~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg-~~~~v~~~~~~~~~~~~~~~~~~-----------~~~~ 163 (373)
T d2madh_ 96 TDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNN-ADLLFFQFAAGPAVGLVVQGGSS-----------DDQL 163 (373)
T ss_pred ceEEEEEECCCCcEEEEEecCCcceeEeccCCCcEEEEeCC-CcEEEEEEcCCCceEEeeccCCe-----------EEEE
Confidence 7889999987533 33333333322 457888887 654444 345678888877642 1223
Q ss_pred ccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeee-cccccCCCCccceE
Q psy4579 178 TAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRL-ILGTHTSDEQNHLL 256 (368)
Q Consensus 178 ~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~-~~~~~~~d~~~~~~ 256 (368)
..... ++.++|++...+++.+.|+++.+||............ .....+.......+.+.+. .+.....++...++
T Consensus 164 ~~~~~---~~~~s~~g~~~~v~~~~dg~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 239 (373)
T d2madh_ 164 LSSPT---CYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVG-AMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQA 239 (373)
T ss_pred eccce---eEEEecCCCcEEEEEcCCCeEEEEEcCCceeeEEEee-eccccCccceeeeEEECCCceEEEecCCceEEEE
Confidence 33332 8899998666778999999999999877632211000 0000000000111111110 00000011111111
Q ss_pred E-----------E--------E----------eecCCcccccccc-------cccCCCCCcccccCCCCceeeeeecCcc
Q psy4579 257 I-----------A--------S----------VQLPNEDAQFDAS-------NYDTDKGDFGGFGSVSGKIEIEIKINHE 300 (368)
Q Consensus 257 ~-----------~--------~----------~~~~~~~~~~~~~-------~~d~~~~~~~~~~~~~~~~~~~~~~~h~ 300 (368)
. . . .........+... ......+.+..++..+++....+ .+.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~d~~t~~~~~~~--~~~ 317 (373)
T d2madh_ 240 DISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQI--SLG 317 (373)
T ss_pred EcCCCeEEEEEeeccccCcEEeeeeccCcceeeEEecCCCeEEEecCCCceEEeecCCCeEEEEECCCCcEEEEe--cCC
Confidence 0 0 0 0000000100000 00112234566777777766655 466
Q ss_pred cceeEEEEeCCCCc-EEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeecccCceeeecc
Q psy4579 301 GEVNRARYMPQNPC-VIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGT 361 (368)
Q Consensus 301 ~~i~~~~~~p~~~~-~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w 361 (368)
..+..++|+|+|.. ++++++.|++|++||+.. .+.+..+.+|....+.|+.
T Consensus 318 ~~~~~~a~spDG~~~l~vt~~~d~~v~v~D~~t----------g~~~~~~~~~g~~P~~l~~ 369 (373)
T d2madh_ 318 HDVDAISVAQDGGPDLYALSAGTEVLHIYDAGA----------GDQDQSTVELGSGPQVLSV 369 (373)
T ss_pred CCeeEEEECCCCCEEEEEEeCCCCeEEEEECCC----------CCEEEEECCCCCCCcEEEE
Confidence 78899999999965 567899999999999976 4555667666665566554
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Probab=99.44 E-value=1e-12 Score=113.17 Aligned_cols=96 Identities=9% Similarity=0.112 Sum_probs=69.7
Q ss_pred CCCcccCCCCCe---eeeeccccCCCCceeeEecCCCCCee-EEEeCCCcEEEEeCCCCCCCCcccccceeeec---ccc
Q psy4579 107 KGGNVQLPNEDA---QFDASNYDTDKGGYGLSWNPSLNGYL-LSASDDHTICLWDINATPKENRVIDAKTIFTG---HTA 179 (368)
Q Consensus 107 ~~g~i~i~~~~~---~~~~~~~~h~~~v~~l~~sp~~~~~l-asg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~---h~~ 179 (368)
.+++|++|+++. ........|.+.+.+|+|+|+| ++| +++..|+.|++|++...... ..+.. +..
T Consensus 12 ~~~~I~v~~~~~~~~l~~~~~~~~~~~v~~la~spDG-~~L~v~~~~d~~i~~~~i~~~~~~-------~~~~~~~~~~~ 83 (333)
T d1ri6a_ 12 ESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDK-RYLYVGVRPEFRVLAYRIAPDDGA-------LTFAAESALPG 83 (333)
T ss_dssp GGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTS-SEEEEEETTTTEEEEEEECTTTCC-------EEEEEEEECSS
T ss_pred CCCcEEEEEEcCCCCeEEEEEEcCCCCEeEEEEeCCC-CEEEEEECCCCeEEEEEEeCCCCc-------EEEeeecccCC
Confidence 578999998653 2344566799999999999999 766 55556899999999765421 22222 223
Q ss_pred ceecceeeEEeCCCCCeEEEeeC-CCcEEEEECCCC
Q psy4579 180 VVEVRYGLSWNPSLNGYLLSASD-DHTICLWDINAT 214 (368)
Q Consensus 180 ~v~~~~~i~~~p~~~~~l~s~s~-dg~i~iwd~~~~ 214 (368)
.+ ..++|+|+ +++|++++. +++|.+|+....
T Consensus 84 ~p---~~l~~spD-g~~l~v~~~~~~~v~~~~~~~~ 115 (333)
T d1ri6a_ 84 SL---THISTDHQ-GQFVFVGSYNAGNVSVTRLEDG 115 (333)
T ss_dssp CC---SEEEECTT-SSEEEEEETTTTEEEEEEEETT
T ss_pred Cc---eEEEEcCC-CCEEeecccCCCceeeeccccc
Confidence 33 28999999 888777764 778999987664
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Probab=99.41 E-value=8.7e-13 Score=113.96 Aligned_cols=149 Identities=7% Similarity=0.034 Sum_probs=89.2
Q ss_pred eEecCCcccccCCCCccccccCcceeeeccccC--CCCCcEEEEEEecCCCccccccCCcccCCCCcccCCCCCeeeeec
Q psy4579 46 AQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTS--DEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQFDAS 123 (368)
Q Consensus 46 ~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~ 123 (368)
++|+++++++++++.++.+.+| ++.+++... ..........+.+.+++..+..++ ..++.|.+||........
T Consensus 2 ~a~~~~~~~l~~~~~~~~v~v~--D~~t~~~~~t~~~~~~~~p~~l~~spDG~~l~v~~---~~~~~v~~~d~~t~~~~~ 76 (346)
T d1jmxb_ 2 PALKAGHEYMIVTNYPNNLHVV--DVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLN---NHYGDIYGIDLDTCKNTF 76 (346)
T ss_dssp CCCCTTCEEEEEEETTTEEEEE--ETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEE---TTTTEEEEEETTTTEEEE
T ss_pred ccCCCCCcEEEEEcCCCEEEEE--ECCCCCEEEEEEcCCCCCcceEEECCCCCEEEEEE---CCCCcEEEEeCccCeeee
Confidence 4689999999999999998555 444443322 122112234566655555443333 347899999987533322
Q ss_pred cc-------cCCCCceeeEecCCCCCeeEEEe------------CCCcEEEEeCCCCCCCCcccccceeeeccc--ccee
Q psy4579 124 NY-------DTDKGGYGLSWNPSLNGYLLSAS------------DDHTICLWDINATPKENRVIDAKTIFTGHT--AVVE 182 (368)
Q Consensus 124 ~~-------~h~~~v~~l~~sp~~~~~lasg~------------~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~--~~v~ 182 (368)
.. .+...+..++|+|+| +++++++ .++.+.+|+..++.. ...+..+. ..+.
T Consensus 77 ~~~~~~~~~~~~~~~~~v~~s~DG-~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-------~~~~~~~~~~~~~~ 148 (346)
T d1jmxb_ 77 HANLSSVPGEVGRSMYSFAISPDG-KEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLE-------AKPVRTFPMPRQVY 148 (346)
T ss_dssp EEESCCSTTEEEECSSCEEECTTS-SEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGG-------BCCSEEEECCSSCC
T ss_pred eecccccccccCCceEEEEEecCC-CEEEEEecCCcceeeeeccCcceEEEEeccccee-------eeEEEeeeccCceE
Confidence 11 122356789999999 7776664 467888998876542 12222221 2232
Q ss_pred cceeeEEeCCCCCeEEEeeCCCcEEEEECCCC
Q psy4579 183 VRYGLSWNPSLNGYLLSASDDHTICLWDINAT 214 (368)
Q Consensus 183 ~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~ 214 (368)
.+.++++ +.+++++ +.+.+||+.++
T Consensus 149 ---~~~~~~~-~~~~~~~---~~~~~~~~~~~ 173 (346)
T d1jmxb_ 149 ---LMRAADD-GSLYVAG---PDIYKMDVKTG 173 (346)
T ss_dssp ---CEEECTT-SCEEEES---SSEEEECTTTC
T ss_pred ---EEEecCC-CEEEEeC---CcceEEEccCC
Confidence 5556665 5555543 45889998775
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.32 E-value=4.5e-12 Score=108.90 Aligned_cols=266 Identities=11% Similarity=-0.004 Sum_probs=142.9
Q ss_pred ccccCCCCccccccCcceeeeccccCC--CCC-cEEEEEEecCCCccccccCCcccCCCCcccCCCCCee-eeecccc--
Q psy4579 53 TSVQLPNEDAQFDASNYDTDKGTHTSD--EQN-HLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQ-FDASNYD-- 126 (368)
Q Consensus 53 ~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~-~~~~~~~-- 126 (368)
+++++++.|+.+.+|+ +..+..... ... -..+..+.+.+++..+.+++ ..+|.|.+||.... .......
T Consensus 2 ~~~vt~~~d~~v~v~D--~~s~~~~~~i~~~~~~~~~~~i~~spDg~~l~v~~---~~~~~v~v~D~~t~~~~~~~~~~~ 76 (337)
T d1pbyb_ 2 DYILAPARPDKLVVID--TEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATV---NKSESLVKIDLVTGETLGRIDLST 76 (337)
T ss_dssp EEEEEEETTTEEEEEE--TTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEE---TTTTEEEEEETTTCCEEEEEECCB
T ss_pred eEEEEEcCCCEEEEEE--CCCCeEEEEEECCCCCCCccEEEECCCCCEEEEEE---CCCCeEEEEECCCCcEEEEEecCC
Confidence 4577888888886554 443332221 111 01133455555444433332 35789999998653 3333222
Q ss_pred ---CCCCceeeEecCCCCCeeEEEe------------CCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeC
Q psy4579 127 ---TDKGGYGLSWNPSLNGYLLSAS------------DDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNP 191 (368)
Q Consensus 127 ---h~~~v~~l~~sp~~~~~lasg~------------~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p 191 (368)
+...+..++|+|++ +.+++++ .++.+.+||..+.. ....+..+. .+. +++|+|
T Consensus 77 ~~~~~~~~~~v~~s~dg-~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-------~~~~~~~~~-~~~---~~~~s~ 144 (337)
T d1pbyb_ 77 PEERVKSLFGAALSPDG-KTLAIYESPVRLELTHFEVQPTRVALYDAETLS-------RRKAFEAPR-QIT---MLAWAR 144 (337)
T ss_dssp TTEEEECTTCEEECTTS-SEEEEEEEEEEECSSCEEECCCEEEEEETTTTE-------EEEEEECCS-SCC---CEEECT
T ss_pred CcccccceeeEEEcCCC-cEEEEeecCCcceeeeccccccceeeccccCCe-------EEEeccccC-Cce---EEEEcC
Confidence 23456789999999 7777765 35778889988763 334455443 443 899999
Q ss_pred CCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEee--ecc-cccCCCCccceEEEEeecCCcccc
Q psy4579 192 SLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LIL-GTHTSDEQNHLLIASVQLPNEDAQ 268 (368)
Q Consensus 192 ~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~-~~~~~d~~~~~~~~~~~~~~~~~~ 268 (368)
+ +.++++++.+ +.+||..++. ....+..+... ....+.+ ..+ ................. .....
T Consensus 145 d-g~~l~~~~~~--~~~~d~~~~~-------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 211 (337)
T d1pbyb_ 145 D-GSKLYGLGRD--LHVMDPEAGT-------LVEDKPIQSWE-AETYAQPDVLAVWNQHESSGVMATPFYTAR--KDIDP 211 (337)
T ss_dssp T-SSCEEEESSS--EEEEETTTTE-------EEEEECSTTTT-TTTBCCCBCCCCCCCCTTTTEEEEEEEEEB--TTSCT
T ss_pred C-CCEEEEEcCC--cceeeeecCc-------EEEEeecCCcc-ccceecCCcceeeccccccceeeeeeeeee--eccce
Confidence 9 8888888654 7789988762 22222221111 0011111 000 01111111111111110 00000
Q ss_pred cccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCcee
Q psy4579 269 FDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLR 348 (368)
Q Consensus 269 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~ 348 (368)
.... ...+.+..++..++.........+...+..+.++|++ .+++.+ ++.|++||+.. ...+..
T Consensus 212 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~i~v~d~~~----------~~~~~~ 275 (337)
T d1pbyb_ 212 ADPT---AYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAK-TRAFGA--YNVLESFDLEK----------NASIKR 275 (337)
T ss_dssp TSGG---GEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTS-SEEEEE--ESEEEEEETTT----------TEEEEE
T ss_pred eeec---ccCccEEEEEcCCCcEEEEEecCCCcceEEEEecccc-eEEEEc--cccEEEEECCC----------CcEEEE
Confidence 1000 0111233445555555544444677788889999998 455443 68999999975 222222
Q ss_pred eecccCceeeecceeee
Q psy4579 349 LRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 349 ~~gh~~~V~~l~w~p~~ 365 (368)
..+...+.+++|+|+.
T Consensus 276 -~~~~~~~~~~~~s~dG 291 (337)
T d1pbyb_ 276 -VPLPHSYYSVNVSTDG 291 (337)
T ss_dssp -EECSSCCCEEEECTTS
T ss_pred -EcCCCCEEEEEECCCC
Confidence 3566788999999874
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.15 E-value=9e-11 Score=101.71 Aligned_cols=131 Identities=9% Similarity=0.016 Sum_probs=70.7
Q ss_pred eeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeee--cccccCCCCccceEEEEeecC
Q psy4579 186 GLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRL--ILGTHTSDEQNHLLIASVQLP 263 (368)
Q Consensus 186 ~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~--~~~~~~~d~~~~~~~~~~~~~ 263 (368)
...+.++ +..++.++.++.+.+|++..+... .+.....+......+.+.+. .....+.++ ..+++.....
T Consensus 199 ~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~-----~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~-~~~~~~~~~~- 270 (355)
T d2bbkh_ 199 HPAYSQK-AGRLVWPTYTGKIHQIDLSSGDAK-----FLPAVEALTEAERADGWRPGGWQQVAYHRAL-DRIYLLVDQR- 270 (355)
T ss_dssp CCEEETT-TTEEEEEBTTSEEEEEECTTSSCE-----ECCCEESSCHHHHHTTEEECSSSCEEEETTT-TEEEEEEEEC-
T ss_pred eccccCC-CCeEEEecCCCeEEEEecCCCcEE-----EEeccCCcccceEeeeeeccceEEEEEeCCC-CeEEEEeccC-
Confidence 6677777 788899999999999999876321 11111122111111111110 000111111 1122211100
Q ss_pred CcccccccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCc-EEEEecCCCeEEEEECCC
Q psy4579 264 NEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPC-VIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 264 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~-~lasgs~Dg~i~iwd~~~ 332 (368)
... ........+..|+..+++....+. +...+.+++|+|+|.. ++++++.|++|++||.++
T Consensus 271 ---~~~---~~~~~~~~v~v~d~~t~~~~~~~~--~~~~~~~~a~spDG~~~l~v~~~~d~~i~v~D~~t 332 (355)
T d2bbkh_ 271 ---DEW---RHKTASRFVVVLDAKTGERLAKFE--MGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAES 332 (355)
T ss_dssp ---CTT---CTTSCEEEEEEEETTTCCEEEEEE--EEEEECEEEECCSSSCEEEEEETTTTEEEEEETTT
T ss_pred ---Cce---eecCCCCeEEEEeCCCCcEEEEec--CCCCEEEEEEcCCCCeEEEEEECCCCEEEEEECCC
Confidence 000 000111234556666777665554 4456899999999964 677888999999999976
|
| >d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]
Probab=98.98 E-value=9e-09 Score=89.49 Aligned_cols=166 Identities=8% Similarity=-0.099 Sum_probs=102.2
Q ss_pred cccCCCCceeeEecCCCCCeeEEE-----eCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEE
Q psy4579 124 NYDTDKGGYGLSWNPSLNGYLLSA-----SDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLL 198 (368)
Q Consensus 124 ~~~h~~~v~~l~~sp~~~~~lasg-----~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~ 198 (368)
...+..++.+++++|+| +.++.. +.++.|.+||..+++ ....+..+..+ .++|+|+ +.+|+
T Consensus 16 ~~~~~~p~~~~a~spdg-~~~~~~~~~~~~~~~~v~v~D~~tg~-------~~~~~~~~~~~-----~~a~SpD-G~~l~ 81 (373)
T d2madh_ 16 AGAADGPTNDEAPGADG-RRSYINLPAHHSAIIQQWVLDAGSGS-------ILGHVNGGFLP-----NPVAAHS-GSEFA 81 (373)
T ss_pred cccCCCCccccccCCCC-CEEEEEcccccCCCceEEEEECCCCC-------EEEEEeCCCCc-----cEEEcCC-CCEEE
Confidence 34578899999999999 665543 234679999988874 44556555432 7899999 88887
Q ss_pred Eee----------CCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEeeecccccCCCCccceEEEEeecCCcccc
Q psy4579 199 SAS----------DDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQ 268 (368)
Q Consensus 199 s~s----------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 268 (368)
+++ .++.|.+||..++ ++...+..+......+..++..+......+...++
T Consensus 82 va~~~~~~~~~~~~~~~v~v~D~~t~-------~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~------------ 142 (373)
T d2madh_ 82 LASTSFSRIAKGKRTDYVEVFDPVTF-------LPIADIELPDAPRFDVGPYSWMNANTPNNADLLFF------------ 142 (373)
T ss_pred EEeecCCcccccccceEEEEEECCCC-------cEEEEEecCCcceeEeccCCCcEEEEeCCCcEEEE------------
Confidence 764 4678999999987 33445554544444443333211111111111111
Q ss_pred cccccccCCCCCcccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCC
Q psy4579 269 FDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 269 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
.++. ...+..++....+.. .+.....++.++|++..++++.+.|+++.+|+...
T Consensus 143 ----~~~~-~~~~~~~~~~~~~~~-----~~~~~~~~~~~s~~g~~~~v~~~~dg~~~~~~~~~ 196 (373)
T d2madh_ 143 ----QFAA-GPAVGLVVQGGSSDD-----QLLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDHAG 196 (373)
T ss_pred ----EEcC-CCceEEeeccCCeEE-----EEeccceeEEEecCCCcEEEEEcCCCeEEEEEcCC
Confidence 1111 111222333233222 34455678899999988888999999999999865
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Probab=98.82 E-value=2.3e-08 Score=85.44 Aligned_cols=69 Identities=9% Similarity=0.056 Sum_probs=55.8
Q ss_pred eEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeee-ccccceecceeeEEeCCCCCeE-EEeeCCCcEEEEEC
Q psy4579 134 LSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFT-GHTAVVEVRYGLSWNPSLNGYL-LSASDDHTICLWDI 211 (368)
Q Consensus 134 l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~i~~~p~~~~~l-~s~s~dg~i~iwd~ 211 (368)
++|++++ ++|++++.|++|.+||+.+++ .+.++. .|...+. +++|+|+ +.++ ++++.++.|.+||+
T Consensus 2 ~a~~~~~-~~l~~~~~~~~v~v~D~~t~~-------~~~t~~~~~~~~p~---~l~~spD-G~~l~v~~~~~~~v~~~d~ 69 (346)
T d1jmxb_ 2 PALKAGH-EYMIVTNYPNNLHVVDVASDT-------VYKSCVMPDKFGPG---TAMMAPD-NRTAYVLNNHYGDIYGIDL 69 (346)
T ss_dssp CCCCTTC-EEEEEEETTTEEEEEETTTTE-------EEEEEECSSCCSSC---EEEECTT-SSEEEEEETTTTEEEEEET
T ss_pred ccCCCCC-cEEEEEcCCCEEEEEECCCCC-------EEEEEEcCCCCCcc---eEEECCC-CCEEEEEECCCCcEEEEeC
Confidence 5789998 999999999999999999874 455555 3444443 9999999 6664 67778999999999
Q ss_pred CCC
Q psy4579 212 NAT 214 (368)
Q Consensus 212 ~~~ 214 (368)
.++
T Consensus 70 ~t~ 72 (346)
T d1jmxb_ 70 DTC 72 (346)
T ss_dssp TTT
T ss_pred ccC
Confidence 887
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=98.81 E-value=5.1e-09 Score=91.21 Aligned_cols=160 Identities=9% Similarity=-0.071 Sum_probs=89.1
Q ss_pred cccCceeeEecCCccc---ccCCCCccccccCcceeeeccccCC-CCCcEEEEEEecCCCccccccCCc------ccCCC
Q psy4579 39 LEWPSLTAQWLPDVTS---VQLPNEDAQFDASNYDTDKGTHTSD-EQNHLLIASVQLPNEDAQFDASNY------DTDKG 108 (368)
Q Consensus 39 ~~~~~~~~~~~p~~~~---l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~------~~~~~ 108 (368)
...|...++..|+++. .+..+.++...+|.++...+..... ...... .+.+.++...+..+.. ....+
T Consensus 18 ~~g~~~~~a~~~~~~~~~v~~~~~~~g~~~~~~~d~~~~~~~~~~~~~~~~--~~a~spDg~~i~~~~~~~~~~~~g~~d 95 (368)
T d1mdah_ 18 SDGSSCDHGPGAISRRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRT 95 (368)
T ss_dssp CCCCCBCCCCCCCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEE
T ss_pred cCCCccccccCCCCcceeEEeeccCCCcceEEEEeCCCCcEEEEEeCCCCC--cceECCCCCEEEEEcccCccccccccC
Confidence 3455666677788775 2335566666667777655443221 000111 1233333332222211 11346
Q ss_pred CcccCCCCCeee-eecccc-------CCCCceeeEecCCCCCeeEEEe-CCCcEEEEeCCCCCCCCcccccceeeecccc
Q psy4579 109 GNVQLPNEDAQF-DASNYD-------TDKGGYGLSWNPSLNGYLLSAS-DDHTICLWDINATPKENRVIDAKTIFTGHTA 179 (368)
Q Consensus 109 g~i~i~~~~~~~-~~~~~~-------h~~~v~~l~~sp~~~~~lasg~-~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~ 179 (368)
+.|.+||..+.. ...... .......++|+|+| ++|+.+. .++.+.+||+.+.+ ....+..+..
T Consensus 96 ~~v~v~D~~t~~~~~~i~~p~~~~~~~g~~p~~~a~SpDG-k~l~va~~~~~~v~~~d~~~~~-------~~~~~~~~~~ 167 (368)
T d1mdah_ 96 DYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASS-ACLLFFLFGSSAAAGLSVPGAS-------DDQLTKSASC 167 (368)
T ss_dssp EEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTS-SCEEEEECSSSCEEEEEETTTE-------EEEEEECSSC
T ss_pred CeEEEEECCCCcEeeeecCCccceecccCCccceEECCCC-CEEEEEeCCCCeEEEEECCCCc-------EeEEeeccCc
Confidence 789999976432 222211 22334579999999 7777665 67999999998864 3344443332
Q ss_pred ceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCC
Q psy4579 180 VVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATP 215 (368)
Q Consensus 180 ~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~ 215 (368)
. .+.|.....++..+.||++.++++....
T Consensus 168 ~-------~~~~~~~~~~v~~~~Dg~~~~~~~~~~~ 196 (368)
T d1mdah_ 168 F-------HIHPGAAATHYLGSCPASLAASDLAAAP 196 (368)
T ss_dssp C-------CCEEEETTEEECCCCTTSCEEEECCSSC
T ss_pred c-------eEccCCCceEEEEcCCCCEEEEEecCCc
Confidence 2 1223335677778888888888876553
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=98.63 E-value=1.7e-07 Score=80.35 Aligned_cols=96 Identities=10% Similarity=-0.069 Sum_probs=61.9
Q ss_pred CCcccCCCCCe-eeeeccccCCCCceeeEecCCCCCeeEEE----------eCCCcEEEEeCCCCCCCCcccccceeeec
Q psy4579 108 GGNVQLPNEDA-QFDASNYDTDKGGYGLSWNPSLNGYLLSA----------SDDHTICLWDINATPKENRVIDAKTIFTG 176 (368)
Q Consensus 108 ~g~i~i~~~~~-~~~~~~~~h~~~v~~l~~sp~~~~~lasg----------~~dg~v~iwd~~~~~~~~~~~~~~~~~~~ 176 (368)
.+.|.+||.+. +.+.....+ ....++|+|+| +.|++. ..|+.|++||..+++. ...+..
T Consensus 27 ~~~v~v~D~~tg~~~~~~~~g--~~~~~a~SpDg-~~l~v~~~~~~~~~~g~~d~~v~v~D~~t~~~-------~~~~~~ 96 (355)
T d2bbkh_ 27 VTQQFVIDGEAGRVIGMIDGG--FLPNPVVADDG-SFIAHASTVFSRIARGERTDYVEVFDPVTLLP-------TADIEL 96 (355)
T ss_dssp SEEEEEEETTTTEEEEEEEEC--SSCEEEECTTS-SCEEEEEEEEEETTEEEEEEEEEEECTTTCCE-------EEEEEE
T ss_pred cCeEEEEECCCCcEEEEEECC--CCCceEEcCCC-CEEEEEeCCCccccccCCCCEEEEEECCCCCE-------EEEEec
Confidence 45688888765 333433333 34479999999 777654 4578999999998752 233332
Q ss_pred ccccee----cceeeEEeCCCCCeEEEe--eCCCcEEEEECCCC
Q psy4579 177 HTAVVE----VRYGLSWNPSLNGYLLSA--SDDHTICLWDINAT 214 (368)
Q Consensus 177 h~~~v~----~~~~i~~~p~~~~~l~s~--s~dg~i~iwd~~~~ 214 (368)
+..... ....++|+|+ +..++.+ +.+..+.+||..++
T Consensus 97 ~~~~~~~~~~~~~~~~~s~d-g~~~~v~~~~~~~~~~~~~~~~~ 139 (355)
T d2bbkh_ 97 PDAPRFLVGTYPWMTSLTPD-GKTLLFYQFSPAPAVGVVDLEGK 139 (355)
T ss_dssp TTCCCCCBSCCGGGEEECTT-SSEEEEEECSSSCEEEEEETTTT
T ss_pred CCcceeecCCCCceEEEecC-CCeeEEecCCCCceeeeeecCCC
Confidence 221110 0127899998 7766655 45678999999886
|
| >d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl peptidase IV/CD26, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=98.59 E-value=1.9e-07 Score=83.76 Aligned_cols=165 Identities=11% Similarity=0.153 Sum_probs=101.7
Q ss_pred cccccCceeeEecCCcccccCCCCccccccCcceeeeccccC-----CCC-CcEEEEEEecCCCccccccC-----Cccc
Q psy4579 37 HALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTS-----DEQ-NHLLIASVQLPNEDAQFDAS-----NYDT 105 (368)
Q Consensus 37 ~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~i~~~~~~~~~~~~~~~-----~~~~ 105 (368)
..+.-...+++|.+|++++.. +++.+ ..++...+.... ... ....|.++.|+++...+... .|..
T Consensus 13 ~~~~~~~~~~~W~~d~~~~~~--~~~~~--~~~~~~t~~~~~~~~~~~~~~~~~~i~~~~~SpDg~~i~~~~~~~~~~r~ 88 (470)
T d2bgra1 13 NTYRLKLYSLRWISDHEYLYK--QENNI--LVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRH 88 (470)
T ss_dssp TCSCCCCCCCEECSSSEEEEE--SSSCE--EEEETTTCCEEEEECTTTTTTSSSCCCEEEECTTSSEEEEEEEEEECSSS
T ss_pred CceeccccCCEeCCCCEEEEE--cCCcE--EEEECCCCCEEEEEchhhhhhccCccceeEECCCCCEEEEEECCcceeee
Confidence 333334557999999998754 35555 344555443321 111 12246777787665543321 1222
Q ss_pred CCCCcccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCccc--ccceeeecc------
Q psy4579 106 DKGGNVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVI--DAKTIFTGH------ 177 (368)
Q Consensus 106 ~~~g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~--~~~~~~~~h------ 177 (368)
+.+|.+.+|++.+.....+..|.+.+..+.|||+| +.+|.. .++.+.+|+..++....... .....+.+.
T Consensus 89 s~~~~~~l~d~~~~~~~~l~~~~~~~~~~~~SPDG-~~ia~~-~~~~l~~~~~~~g~~~~~t~~~~~~~~~~g~~d~~~~ 166 (470)
T d2bgra1 89 SYTASYDIYDLNKRQLITEERIPNNTQWVTWSPVG-HKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYE 166 (470)
T ss_dssp CEEEEEEEEETTTTEECCSSCCCTTEEEEEECSST-TCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHH
T ss_pred ccCceEEEEECCCCcccccccCCccccccccccCc-ceeeEe-ecccceEEECCCCceeeeeeccCCCcccccccceeee
Confidence 44678889999888788888899999999999999 888885 57889999988764311000 000111111
Q ss_pred ---ccceecceeeEEeCCCCCeEEEeeCCCc-EEEEEC
Q psy4579 178 ---TAVVEVRYGLSWNPSLNGYLLSASDDHT-ICLWDI 211 (368)
Q Consensus 178 ---~~~v~~~~~i~~~p~~~~~l~s~s~dg~-i~iwd~ 211 (368)
.+... .+.|+|+ +..|+....|.+ +..|++
T Consensus 167 ~~~~~~~~---~~~wSPD-Gk~ia~~~~d~~~v~~~~~ 200 (470)
T d2bgra1 167 EEVFSAYS---ALWWSPN-GTFLAYAQFNDTEVPLIEY 200 (470)
T ss_dssp HHTSSSSB---CEEECTT-SSEEEEEEEECTTCCEEEE
T ss_pred eeecCCcc---ccEECCC-CCccceeEecCCcCceEEE
Confidence 12222 6889999 889988876544 555544
|
| >d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: TolB, C-terminal domain family: TolB, C-terminal domain domain: TolB, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=98.48 E-value=8.1e-06 Score=66.79 Aligned_cols=86 Identities=9% Similarity=0.099 Sum_probs=53.0
Q ss_pred ccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeC-CC--cEEEEeCCCCCCCCcccccceeeeccccceecceee
Q psy4579 111 VQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASD-DH--TICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGL 187 (368)
Q Consensus 111 i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~-dg--~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i 187 (368)
|.+-|.++.-...+..+...+..-+||||| +.||-... .+ .+.+.+...+. ...+..+.+... ..
T Consensus 21 l~i~d~dG~~~~~l~~~~~~~~sP~wSPDG-k~IAf~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~---~~ 88 (269)
T d2hqsa1 21 LRVSDYDGYNQFVVHRSPQPLMSPAWSPDG-SKLAYVTFESGRSALVIQTLANGA--------VRQVASFPRHNG---AP 88 (269)
T ss_dssp EEEEETTSCSCEEEEEESSCEEEEEECTTS-SEEEEEECTTSSCEEEEEETTTCC--------EEEEECCSSCEE---EE
T ss_pred EEEEcCCCCCcEEEecCCCceeeeEECCCC-CEEEEEEeeccCcceeeeecccCc--------eeEEeeeecccc---cc
Confidence 445556665555555677788899999999 77775543 33 35555655542 344555555553 88
Q ss_pred EEeCCCCCeEEEee-CCCcEEEE
Q psy4579 188 SWNPSLNGYLLSAS-DDHTICLW 209 (368)
Q Consensus 188 ~~~p~~~~~l~s~s-~dg~i~iw 209 (368)
.|+|+ +..++... .++...++
T Consensus 89 ~~spd-g~~i~~~~~~~~~~~~~ 110 (269)
T d2hqsa1 89 AFSPD-GSKLAFALSKTGSLNLY 110 (269)
T ss_dssp EECTT-SSEEEEEECTTSSCEEE
T ss_pred eecCC-CCeeeEeeecCCcccee
Confidence 99999 66555443 44444433
|
| >d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl peptidase IV/CD26, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=98.48 E-value=6.9e-08 Score=86.82 Aligned_cols=95 Identities=13% Similarity=0.115 Sum_probs=73.1
Q ss_pred CCCcccCCCCCeeeee------ccccCCCCceeeEecCCCCCeeEEEeC---------CCcEEEEeCCCCCCCCcccccc
Q psy4579 107 KGGNVQLPNEDAQFDA------SNYDTDKGGYGLSWNPSLNGYLLSASD---------DHTICLWDINATPKENRVIDAK 171 (368)
Q Consensus 107 ~~g~i~i~~~~~~~~~------~~~~h~~~v~~l~~sp~~~~~lasg~~---------dg~v~iwd~~~~~~~~~~~~~~ 171 (368)
.+|.+.+|+..+.... .+..|...|.++.||||| ++||.++. ++.+.+||+.++. .
T Consensus 34 ~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~i~~~~~SpDg-~~i~~~~~~~~~~r~s~~~~~~l~d~~~~~--------~ 104 (470)
T d2bgra1 34 QENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDG-QFILLEYNYVKQWRHSYTASYDIYDLNKRQ--------L 104 (470)
T ss_dssp SSSCEEEEETTTCCEEEEECTTTTTTSSSCCCEEEECTTS-SEEEEEEEEEECSSSCEEEEEEEEETTTTE--------E
T ss_pred cCCcEEEEECCCCCEEEEEchhhhhhccCccceeEECCCC-CEEEEEECCcceeeeccCceEEEEECCCCc--------c
Confidence 3677889997653322 345567889999999999 88887753 5788999999873 3
Q ss_pred eeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCCC
Q psy4579 172 TIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATP 215 (368)
Q Consensus 172 ~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~ 215 (368)
..+..|...+. .+.|+|+ ++.+|.. .++.+.+|+..++.
T Consensus 105 ~~l~~~~~~~~---~~~~SPD-G~~ia~~-~~~~l~~~~~~~g~ 143 (470)
T d2bgra1 105 ITEERIPNNTQ---WVTWSPV-GHKLAYV-WNNDIYVKIEPNLP 143 (470)
T ss_dssp CCSSCCCTTEE---EEEECSS-TTCEEEE-ETTEEEEESSTTSC
T ss_pred cccccCCcccc---ccccccC-cceeeEe-ecccceEEECCCCc
Confidence 55677777775 9999999 8888885 57789999988763
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=98.24 E-value=5.7e-06 Score=71.31 Aligned_cols=95 Identities=8% Similarity=-0.188 Sum_probs=60.4
Q ss_pred CcccCCCCCee-eeeccccCCCCceeeEecCCCCCeeEEEe----------CCCcEEEEeCCCCCCCCcccccceeeecc
Q psy4579 109 GNVQLPNEDAQ-FDASNYDTDKGGYGLSWNPSLNGYLLSAS----------DDHTICLWDINATPKENRVIDAKTIFTGH 177 (368)
Q Consensus 109 g~i~i~~~~~~-~~~~~~~h~~~v~~l~~sp~~~~~lasg~----------~dg~v~iwd~~~~~~~~~~~~~~~~~~~h 177 (368)
..+.++|.+.. .......+.. ..++|+|+| +.|+..+ .|+.|++||..+++ +...+..+
T Consensus 46 ~~~~~~d~~~~~~~~~~~~~~~--~~~a~spDg-~~i~~~~~~~~~~~~g~~d~~v~v~D~~t~~-------~~~~i~~p 115 (368)
T d1mdah_ 46 TENWVSCAGCGVTLGHSLGAFL--SLAVAGHSG-SDFALASTSFARSAKGKRTDYVEVFDPVTFL-------PIADIELP 115 (368)
T ss_dssp EEEEEEETTTTEEEEEEEECTT--CEEEECTTS-SCEEEEEEEETTTTSSSEEEEEEEECTTTCC-------EEEEEEET
T ss_pred ceEEEEeCCCCcEEEEEeCCCC--CcceECCCC-CEEEEEcccCccccccccCCeEEEEECCCCc-------EeeeecCC
Confidence 34555565543 3333333333 358999999 7777654 47889999998875 33434332
Q ss_pred cccee----cceeeEEeCCCCCeEEEee-CCCcEEEEECCCC
Q psy4579 178 TAVVE----VRYGLSWNPSLNGYLLSAS-DDHTICLWDINAT 214 (368)
Q Consensus 178 ~~~v~----~~~~i~~~p~~~~~l~s~s-~dg~i~iwd~~~~ 214 (368)
..... ....++|+|+ +++++.++ .++.+.+||+.++
T Consensus 116 ~~~~~~~g~~p~~~a~SpD-Gk~l~va~~~~~~v~~~d~~~~ 156 (368)
T d1mdah_ 116 DAPRFSVGPRVHIIGNCAS-SACLLFFLFGSSAAAGLSVPGA 156 (368)
T ss_dssp TSCSCCBSCCTTSEEECTT-SSCEEEEECSSSCEEEEEETTT
T ss_pred ccceecccCCccceEECCC-CCEEEEEeCCCCeEEEEECCCC
Confidence 21110 0137999999 77776664 6799999999886
|
| >d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=98.21 E-value=3.6e-07 Score=80.09 Aligned_cols=60 Identities=12% Similarity=-0.002 Sum_probs=38.3
Q ss_pred eEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCc------eeeecccCceeeecceeee
Q psy4579 304 NRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPD------LRLRGHQKEGLIEGTYNCY 365 (368)
Q Consensus 304 ~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~------~~~~gh~~~V~~l~w~p~~ 365 (368)
...+|.++| +.+.|...|..|..|++......... ....++ .-..||...+.+.+++|..
T Consensus 315 lh~~fd~~g-~~yts~~~ds~v~kw~~~~~~~~~~~-~~~~~v~~~~~v~y~~GH~~~~~~~t~~pdG 380 (441)
T d1qnia2 315 LHTTFDGRG-NAYTTLFIDSQVCKWNIADAIKHYNG-DRVNYIRQKLDVQYQPGHNHASLTESRDADG 380 (441)
T ss_dssp EEEEECSSS-EEEEEETTTTEEEEEEHHHHHHHHTT-CCCCCEEEEEECSSCEEEEEETTTTSTTCCC
T ss_pred ccceecCCc-eEEEcccccceEEEeccchhhhhhcc-CCCceeEeccccccCCCCCccccccccCCCC
Confidence 335799999 78889999999999998421000000 001111 1125899988888888753
|
| >d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Serine/threonine-protein kinase PknD species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.88 E-value=0.00053 Score=55.50 Aligned_cols=95 Identities=12% Similarity=0.153 Sum_probs=58.6
Q ss_pred CCcccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceee
Q psy4579 108 GGNVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGL 187 (368)
Q Consensus 108 ~g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i 187 (368)
++.+++++.................++++.+++ +++++-..+..+..++...... ......+-.. . .++
T Consensus 77 ~~~i~~~~~~~~~~~~~~~~~~~p~~iavd~~g-~i~v~d~~~~~~~~~~~~~~~~------~~~~~~~~~~-p---~~i 145 (260)
T d1rwia_ 77 NRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQG-AVYVADRGNNRVVKLAAGSKTQ------TVLPFTGLND-P---DGV 145 (260)
T ss_dssp TEEEEECTTCSCCEECCCCSCCSEEEEEECTTC-CEEEEEGGGTEEEEECTTCSSC------EECCCCSCCS-C---CEE
T ss_pred eceeeeeeeccceeeeeeeeeeecccccccccc-eeEeecccccccccccccccee------eeeeecccCC-c---cee
Confidence 345555554433222223333567889999998 7777766667777777654321 0111122222 2 288
Q ss_pred EEeCCCCCeEEEeeCCCcEEEEECCCC
Q psy4579 188 SWNPSLNGYLLSASDDHTICLWDINAT 214 (368)
Q Consensus 188 ~~~p~~~~~l~s~s~dg~i~iwd~~~~ 214 (368)
++.|+ ++++++...++.|..+|....
T Consensus 146 ~~~~~-g~~~v~~~~~~~i~~~d~~~~ 171 (260)
T d1rwia_ 146 AVDNS-GNVYVTDTDNNRVVKLEAESN 171 (260)
T ss_dssp EECTT-CCEEEEEGGGTEEEEECTTTC
T ss_pred eecCC-CCEeeeccccccccccccccc
Confidence 99997 788888888889999997764
|
| >d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Brain tumor cg10719-pa species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=97.78 E-value=0.0058 Score=49.63 Aligned_cols=176 Identities=14% Similarity=0.205 Sum_probs=101.7
Q ss_pred CCcccCCCCCeeeeeccc-cCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeee--ccccceecc
Q psy4579 108 GGNVQLPNEDAQFDASNY-DTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFT--GHTAVVEVR 184 (368)
Q Consensus 108 ~g~i~i~~~~~~~~~~~~-~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~--~h~~~v~~~ 184 (368)
++.|..++.++....... ........++..+++ .++++....+.+.+++.+.. ....+. .+....
T Consensus 92 ~~~i~~~~~~g~~~~~~~~~~~~~p~~~avd~~G-~i~v~~~~~~~~~~~~~~g~--------~~~~~g~~~~~~~~--- 159 (279)
T d1q7fa_ 92 THQIQIYNQYGQFVRKFGATILQHPRGVTVDNKG-RIIVVECKVMRVIIFDQNGN--------VLHKFGCSKHLEFP--- 159 (279)
T ss_dssp GCEEEEECTTSCEEEEECTTTCSCEEEEEECTTS-CEEEEETTTTEEEEECTTSC--------EEEEEECTTTCSSE---
T ss_pred ccccccccccccceeecCCCcccccceeccccCC-cEEEEeeccceeeEeccCCc--------eeeccccccccccc---
Confidence 456666776665554432 344566789999998 77777777777888876542 233332 222333
Q ss_pred eeeEEeCCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeee--cccccEeEEEEeeecccccCCCCccceEEEEeec
Q psy4579 185 YGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFT--GHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQL 262 (368)
Q Consensus 185 ~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~--~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~ 262 (368)
..+++.++ ++++++....+.|++||.... .+..+. +.......+++.+ ...++++...
T Consensus 160 ~~i~~d~~-g~i~v~d~~~~~V~~~d~~G~--------~~~~~g~~g~~~~P~giavD~----------~G~i~Vad~~- 219 (279)
T d1q7fa_ 160 NGVVVNDK-QEIFISDNRAHCVKVFNYEGQ--------YLRQIGGEGITNYPIGVGINS----------NGEILIADNH- 219 (279)
T ss_dssp EEEEECSS-SEEEEEEGGGTEEEEEETTCC--------EEEEESCTTTSCSEEEEEECT----------TCCEEEEECS-
T ss_pred ceeeeccc-eeEEeeeccccceeeeecCCc--------eeeeecccccccCCccccccc----------CCeEEEEECC-
Confidence 37888887 788888888999999997653 233332 1222334444432 1123333210
Q ss_pred CCcccccccccccCCCCCcccccCCCCceeeeeec-CcccceeEEEEeCCCCcEEEEecCCCeEEEEECCC
Q psy4579 263 PNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKI-NHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 263 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~-~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
....+..++. .|+....+.. ........+++.|+| .++++ +.+..|++|...+
T Consensus 220 ----~~~~v~~f~~-----------~G~~~~~~~~~~~~~~p~~vav~~dG-~l~V~-~~n~~v~~fr~~~ 273 (279)
T d1q7fa_ 220 ----NNFNLTIFTQ-----------DGQLISALESKVKHAQCFDVALMDDG-SVVLA-SKDYRLYIYRYVQ 273 (279)
T ss_dssp ----SSCEEEEECT-----------TSCEEEEEEESSCCSCEEEEEEETTT-EEEEE-ETTTEEEEEECSC
T ss_pred ----CCcEEEEECC-----------CCCEEEEEeCCCCCCCEeEEEEeCCC-cEEEE-eCCCeEEEEEeee
Confidence 0001112221 2443333321 223356889999999 67655 5789999999975
|
| >d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP) species: Squid (Loligo vulgaris) [TaxId: 6622]
Probab=97.78 E-value=0.00085 Score=55.97 Aligned_cols=51 Identities=18% Similarity=0.371 Sum_probs=35.7
Q ss_pred cccccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCC
Q psy4579 281 FGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
+..++...+.....+. ......++++|.|++..+++|.+..|+|...++..
T Consensus 249 I~~~dp~~g~~~~~i~-~p~~~~t~~afg~d~~~lyVt~~~~g~i~~~~~~~ 299 (314)
T d1pjxa_ 249 IEVFGPDGGQPKMRIR-CPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp EEEECTTCBSCSEEEE-CSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred EEEEeCCCCEEEEEEE-CCCCCEEEEEEeCCCCEEEEEECCCCcEEEEECCC
Confidence 3344444444444443 33456789999999877888989999999999864
|
| >d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: All0351-like domain: Hypothetical protein All0351 homologue species: Nostoc punctiforme [TaxId: 272131]
Probab=97.78 E-value=0.0013 Score=54.40 Aligned_cols=72 Identities=11% Similarity=0.111 Sum_probs=55.7
Q ss_pred CCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEE
Q psy4579 129 KGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICL 208 (368)
Q Consensus 129 ~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~i 208 (368)
..+..++++|+| +++++...+++|..++.... ...+......+. +++|.|+ ++++++...++.+..
T Consensus 28 ~~~e~iAv~pdG-~l~vt~~~~~~I~~i~p~g~---------~~~~~~~~~~~~---gla~~~d-G~l~v~~~~~~~~~~ 93 (302)
T d2p4oa1 28 TFLENLASAPDG-TIFVTNHEVGEIVSITPDGN---------QQIHATVEGKVS---GLAFTSN-GDLVATGWNADSIPV 93 (302)
T ss_dssp CCEEEEEECTTS-CEEEEETTTTEEEEECTTCC---------EEEEEECSSEEE---EEEECTT-SCEEEEEECTTSCEE
T ss_pred CCcCCEEECCCC-CEEEEeCCCCEEEEEeCCCC---------EEEEEcCCCCcc---eEEEcCC-CCeEEEecCCceEEE
Confidence 357789999999 89999999999988886543 233444445553 9999998 889999888888888
Q ss_pred EECCCC
Q psy4579 209 WDINAT 214 (368)
Q Consensus 209 wd~~~~ 214 (368)
++....
T Consensus 94 ~~~~~~ 99 (302)
T d2p4oa1 94 VSLVKS 99 (302)
T ss_dssp EEEECT
T ss_pred EEeccc
Confidence 887554
|
| >d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: TolB, C-terminal domain family: TolB, C-terminal domain domain: TolB, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=97.76 E-value=0.00024 Score=57.59 Aligned_cols=76 Identities=8% Similarity=0.101 Sum_probs=40.6
Q ss_pred CCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEe-eCCCc
Q psy4579 127 TDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSA-SDDHT 205 (368)
Q Consensus 127 h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~-s~dg~ 205 (368)
.........+++++...+++...+|...+|....... ....+..+.... ....|+|+ +..++.. ...+.
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~------~~~~~~~~~~~~---~~~~~spd-g~~~~~~~~~~~~ 194 (269)
T d2hqsa1 125 GRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGG------APQRITWEGSQN---QDADVSSD-GKFMVMVSSNGGQ 194 (269)
T ss_dssp CSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSS------CCEECCCSSSEE---EEEEECTT-SSEEEEEEECSSC
T ss_pred ccccccccccccccccceecccccCCceEeeeecccc------cceeeecccccc---cccccccc-cceeEEEeecCCc
Confidence 3344445567777645666666666555554432221 123333344444 37889999 6655555 44455
Q ss_pred EEEEECC
Q psy4579 206 ICLWDIN 212 (368)
Q Consensus 206 i~iwd~~ 212 (368)
..+|.+.
T Consensus 195 ~~i~~~~ 201 (269)
T d2hqsa1 195 QHIAKQD 201 (269)
T ss_dssp EEEEEEE
T ss_pred eeeeEee
Confidence 5555443
|
| >d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme family: 3-carboxy-cis,cis-mucoante lactonizing enzyme domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme species: Neurospora crassa [TaxId: 5141]
Probab=97.69 E-value=0.0011 Score=56.53 Aligned_cols=80 Identities=18% Similarity=0.275 Sum_probs=49.4
Q ss_pred CCCceeeEecCCCCCeeEEEe-CCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeE-EEeeCCCc
Q psy4579 128 DKGGYGLSWNPSLNGYLLSAS-DDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYL-LSASDDHT 205 (368)
Q Consensus 128 ~~~v~~l~~sp~~~~~lasg~-~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l-~s~s~dg~ 205 (368)
...+.++.|+|+| ++++++. ....|.+|+......... ...........++ + .+.|+|+ +.++ ++.-.+++
T Consensus 144 ~~h~h~v~~sPdG-~~l~v~d~g~d~v~~~~~~~~g~~~~-~~~~~~~~~g~gP-r---~i~f~pd-g~~~yv~~e~~~~ 216 (365)
T d1jofa_ 144 NTGIHGMVFDPTE-TYLYSADLTANKLWTHRKLASGEVEL-VGSVDAPDPGDHP-R---WVAMHPT-GNYLYALMEAGNR 216 (365)
T ss_dssp TCCEEEEEECTTS-SEEEEEETTTTEEEEEEECTTSCEEE-EEEEECSSTTCCE-E---EEEECTT-SSEEEEEETTTTE
T ss_pred CCcceEEEECCCC-CEEEEeeCCCCEEEEEEccCCCceee-ccceeecCCCCce-E---EEEECCC-CceEEEeccCCCE
Confidence 3357899999999 7666665 456788887654321100 0001111112233 2 8999999 6665 55567889
Q ss_pred EEEEECCCC
Q psy4579 206 ICLWDINAT 214 (368)
Q Consensus 206 i~iwd~~~~ 214 (368)
|.+||+...
T Consensus 217 V~v~~~~~~ 225 (365)
T d1jofa_ 217 ICEYVIDPA 225 (365)
T ss_dssp EEEEEECTT
T ss_pred EEEEEecCC
Confidence 999998765
|
| >d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=97.62 E-value=0.00058 Score=59.34 Aligned_cols=58 Identities=9% Similarity=0.022 Sum_probs=39.7
Q ss_pred cCCCCceeeEecCCCCCee-EEEeCCCcEEEEeCCCCCCCCcccccceeee-ccccceecceeeEEeCCCCC
Q psy4579 126 DTDKGGYGLSWNPSLNGYL-LSASDDHTICLWDINATPKENRVIDAKTIFT-GHTAVVEVRYGLSWNPSLNG 195 (368)
Q Consensus 126 ~h~~~v~~l~~sp~~~~~l-asg~~dg~v~iwd~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~i~~~p~~~~ 195 (368)
.|.........+||| ++| ++...+..|.++|+.+.+. ...+. .+..... .++|+|+ ++
T Consensus 69 ~hhP~~s~t~gtpDG-r~lfV~d~~~~rVavIDl~t~k~-------~~ii~iP~g~gph---gi~~spd-g~ 128 (441)
T d1qnia2 69 CHHPHISMTDGRYDG-KYLFINDKANTRVARIRLDIMKT-------DKITHIPNVQAIH---GLRLQKV-PK 128 (441)
T ss_dssp BCCCEEEEETTEEEE-EEEEEEETTTTEEEEEETTTTEE-------EEEEECTTCCCEE---EEEECCS-SB
T ss_pred ccCCCcceecccCCC-CEEEEEcCCCCEEEEEECCCCcE-------eeEEecCCCCCcc---ceEEecc-CC
Confidence 355667777788999 665 5556889999999998742 23332 2334443 8999998 55
|
| >d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Serine/threonine-protein kinase PknD species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.30 E-value=0.016 Score=46.32 Aligned_cols=155 Identities=9% Similarity=0.096 Sum_probs=82.7
Q ss_pred CceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEE
Q psy4579 130 GGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLW 209 (368)
Q Consensus 130 ~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iw 209 (368)
....+++++++ +++++....+.+++++-.+.. ......+... . .++++.++ ++++++-.....+..+
T Consensus 58 ~p~gvav~~~g-~i~v~d~~~~~i~~~~~~~~~-------~~~~~~~~~~-p---~~iavd~~-g~i~v~d~~~~~~~~~ 124 (260)
T d1rwia_ 58 QPQGLAVDGAG-TVYVTDFNNRVVTLAAGSNNQ-------TVLPFDGLNY-P---EGLAVDTQ-GAVYVADRGNNRVVKL 124 (260)
T ss_dssp SCCCEEECTTC-CEEEEETTTEEEEECTTCSCC-------EECCCCSCCS-E---EEEEECTT-CCEEEEEGGGTEEEEE
T ss_pred CceEEEEcCCC-CEEEeeeeeceeeeeeeccce-------eeeeeeeeee-c---cccccccc-ceeEeecccccccccc
Confidence 45778999998 788877777777766544331 1111222222 3 38999887 7777776667777777
Q ss_pred ECCCCCCCCccccceeeeecccccEeEEEEeeecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCC
Q psy4579 210 DINATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSG 289 (368)
Q Consensus 210 d~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 289 (368)
+...... ......+ ......+++.+ + ..+|+... ....+..++.. ..
T Consensus 125 ~~~~~~~------~~~~~~~-~~~p~~i~~~~--------~--g~~~v~~~------~~~~i~~~d~~----------~~ 171 (260)
T d1rwia_ 125 AAGSKTQ------TVLPFTG-LNDPDGVAVDN--------S--GNVYVTDT------DNNRVVKLEAE----------SN 171 (260)
T ss_dssp CTTCSSC------EECCCCS-CCSCCEEEECT--------T--CCEEEEEG------GGTEEEEECTT----------TC
T ss_pred cccccee------eeeeecc-cCCcceeeecC--------C--CCEeeecc------ccccccccccc----------cc
Confidence 7655321 0111111 11223444432 1 12333221 00011112221 11
Q ss_pred ceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCC
Q psy4579 290 KIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 290 ~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
...............+++.+++ +++++....+.|..++...
T Consensus 172 -~~~~~~~~~~~~p~gi~~d~~g-~l~vsd~~~~~i~~~~~~~ 212 (260)
T d1rwia_ 172 -NQVVLPFTDITAPWGIAVDEAG-TVYVTEHNTNQVVKLLAGS 212 (260)
T ss_dssp -CEEECCCSSCCSEEEEEECTTC-CEEEEETTTTEEEEECTTC
T ss_pred -eeeeeeccccCCCccceeeeee-eeeeeecCCCEEEEEeCCC
Confidence 1122222344556889999998 6888888888888887653
|
| >d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Lactonase Drp35 species: Staphylococcus aureus [TaxId: 1280]
Probab=97.11 E-value=0.01 Score=49.15 Aligned_cols=73 Identities=5% Similarity=0.084 Sum_probs=42.6
Q ss_pred CCceeeEecCCCCCeeEEEeCC------CcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCC-eEEEee
Q psy4579 129 KGGYGLSWNPSLNGYLLSASDD------HTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNG-YLLSAS 201 (368)
Q Consensus 129 ~~v~~l~~sp~~~~~lasg~~d------g~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~-~l~s~s 201 (368)
...+.+++.|+| ++.++.... +.+..++.... ....+...-... ..|+|+|+ ++ +.++-+
T Consensus 130 ~~~nd~~~d~~G-~l~vtd~~~~~~~~~g~v~~~~~dg~--------~~~~~~~~~~~p---nGia~s~d-g~~lyvad~ 196 (319)
T d2dg1a1 130 YCIDDMVFDSKG-GFYFTDFRGYSTNPLGGVYYVSPDFR--------TVTPIIQNISVA---NGIALSTD-EKVLWVTET 196 (319)
T ss_dssp CCEEEEEECTTS-CEEEEECCCBTTBCCEEEEEECTTSC--------CEEEEEEEESSE---EEEEECTT-SSEEEEEEG
T ss_pred cCCcceeEEecc-ceeecccccccccCcceeEEEecccc--------eeEEEeecccee---eeeeeccc-cceEEEecc
Confidence 346778999998 776664321 22444443322 112222111122 38999998 55 556667
Q ss_pred CCCcEEEEECCCC
Q psy4579 202 DDHTICLWDINAT 214 (368)
Q Consensus 202 ~dg~i~iwd~~~~ 214 (368)
..+.|..||+...
T Consensus 197 ~~~~I~~~d~~~~ 209 (319)
T d2dg1a1 197 TANRLHRIALEDD 209 (319)
T ss_dssp GGTEEEEEEECTT
T ss_pred cCCceEEEEEcCC
Confidence 7889999988654
|
| >d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP) species: Squid (Loligo vulgaris) [TaxId: 6622]
Probab=97.08 E-value=0.023 Score=46.91 Aligned_cols=53 Identities=17% Similarity=0.151 Sum_probs=35.7
Q ss_pred cceeEEEEeCCCCcEEEEecCCCeEEEEECCCCCCCCCCCCCCCCceeeecccCceeeecceee
Q psy4579 301 GEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEGTYNC 364 (368)
Q Consensus 301 ~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~w~p~ 364 (368)
...-.+++..+| ++.++....+.|.+||... ......+........+++|.|.
T Consensus 226 ~~pdGiavD~~G-nlyVa~~~~g~I~~~dp~~----------g~~~~~i~~p~~~~t~~afg~d 278 (314)
T d1pjxa_ 226 GGADGMDFDEDN-NLLVANWGSSHIEVFGPDG----------GQPKMRIRCPFEKPSNLHFKPQ 278 (314)
T ss_dssp CEEEEEEEBTTC-CEEEEEETTTEEEEECTTC----------BSCSEEEECSSSCEEEEEECTT
T ss_pred ccceeeEEecCC-cEEEEEcCCCEEEEEeCCC----------CEEEEEEECCCCCEEEEEEeCC
Confidence 345678999999 6776766789999999763 2223334444456677888774
|
| >d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: All0351-like domain: Hypothetical protein All0351 homologue species: Nostoc punctiforme [TaxId: 272131]
Probab=96.95 E-value=0.01 Score=48.72 Aligned_cols=160 Identities=11% Similarity=0.040 Sum_probs=84.4
Q ss_pred eeeEecCCcccccCCCCccccccCcceeeeccccCCCCCcEEEEEEecCCCccccccCCcccCCCCcccCCCCCe----e
Q psy4579 44 LTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDA----Q 119 (368)
Q Consensus 44 ~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i~i~~~~~----~ 119 (368)
-.++++|||+.+++...++.| +.++.......... .......+.+.++.. +....+. ++.+..++... .
T Consensus 31 e~iAv~pdG~l~vt~~~~~~I--~~i~p~g~~~~~~~-~~~~~~gla~~~dG~-l~v~~~~---~~~~~~~~~~~~~~~~ 103 (302)
T d2p4oa1 31 ENLASAPDGTIFVTNHEVGEI--VSITPDGNQQIHAT-VEGKVSGLAFTSNGD-LVATGWN---ADSIPVVSLVKSDGTV 103 (302)
T ss_dssp EEEEECTTSCEEEEETTTTEE--EEECTTCCEEEEEE-CSSEEEEEEECTTSC-EEEEEEC---TTSCEEEEEECTTSCE
T ss_pred CCEEECCCCCEEEEeCCCCEE--EEEeCCCCEEEEEc-CCCCcceEEEcCCCC-eEEEecC---CceEEEEEecccccce
Confidence 468999999999888777766 43332211111110 011244455544433 3322222 34444443221 1
Q ss_pred eeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCccccc-ceeeeccccceecceeeEEeCCCCCeEE
Q psy4579 120 FDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDA-KTIFTGHTAVVEVRYGLSWNPSLNGYLL 198 (368)
Q Consensus 120 ~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~-~~~~~~h~~~v~~~~~i~~~p~~~~~l~ 198 (368)
............+.+.+.+++ +++++.+.++.+..++...+......... ......+.... .+..+.+.. ..+++
T Consensus 104 ~~~~~~~~~~~~n~i~~~~~g-~~~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ngi~~~~--~~l~~ 179 (302)
T d2p4oa1 104 ETLLTLPDAIFLNGITPLSDT-QYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFP-AANGLKRFG--NFLYV 179 (302)
T ss_dssp EEEEECTTCSCEEEEEESSSS-EEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSC-SEEEEEEET--TEEEE
T ss_pred eeccccCCccccceeEEccCC-CEEeeccccccceeeeccCCcceeEecCCccceeeccCccc-ccccccccC--Cceee
Confidence 111222345567889999998 88988888898888887765211000000 00000011111 012566653 56777
Q ss_pred EeeCCCcEEEEECCCC
Q psy4579 199 SASDDHTICLWDINAT 214 (368)
Q Consensus 199 s~s~dg~i~iwd~~~~ 214 (368)
+.+..+.|..+++...
T Consensus 180 ~~~~~~~i~~~~~~~~ 195 (302)
T d2p4oa1 180 SNTEKMLLLRIPVDST 195 (302)
T ss_dssp EETTTTEEEEEEBCTT
T ss_pred ecCCCCeEEecccccc
Confidence 7788889998888764
|
| >d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Lactonase Drp35 species: Staphylococcus aureus [TaxId: 1280]
Probab=96.90 E-value=0.054 Score=44.59 Aligned_cols=162 Identities=11% Similarity=0.057 Sum_probs=85.9
Q ss_pred CceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCC----Cc
Q psy4579 130 GGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDD----HT 205 (368)
Q Consensus 130 ~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~d----g~ 205 (368)
.+..++|.++| +++++-...+.|..|+..+.. ....+....... ..+++.++ +.++++...+ +.
T Consensus 41 ~lEG~~~D~~G-~Ly~~D~~~g~I~ri~p~g~~-------~~~~~~~~~~~p---~gla~~~d-G~l~va~~~~~~~~~~ 108 (319)
T d2dg1a1 41 QLEGLNFDRQG-QLFLLDVFEGNIFKINPETKE-------IKRPFVSHKANP---AAIKIHKD-GRLFVCYLGDFKSTGG 108 (319)
T ss_dssp CEEEEEECTTS-CEEEEETTTCEEEEECTTTCC-------EEEEEECSSSSE---EEEEECTT-SCEEEEECTTSSSCCE
T ss_pred CcEeCEECCCC-CEEEEECCCCEEEEEECCCCe-------EEEEEeCCCCCe---eEEEECCC-CCEEEEecCCCcccee
Confidence 45688999998 788888888999888877653 122233333334 38999998 7777765432 23
Q ss_pred EEEEECCCCCCCCccccceeeeec--ccccEeEEEEeeecccccCCCCccceEEEEeecCCcccccccccccCCCCCccc
Q psy4579 206 ICLWDINATPKENRVIDAKTIFTG--HTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGG 283 (368)
Q Consensus 206 i~iwd~~~~~~~~~~~~~~~~~~~--~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 283 (368)
+...+..... ....... -....+.+.+.+ .-.+|+......... ..+.+..
T Consensus 109 i~~~~~~~~~-------~~~~~~~~~~~~~~nd~~~d~----------~G~l~vtd~~~~~~~----------~~g~v~~ 161 (319)
T d2dg1a1 109 IFAATENGDN-------LQDIIEDLSTAYCIDDMVFDS----------KGGFYFTDFRGYSTN----------PLGGVYY 161 (319)
T ss_dssp EEEECTTSCS-------CEEEECSSSSCCCEEEEEECT----------TSCEEEEECCCBTTB----------CCEEEEE
T ss_pred EEEEcCCCce-------eeeeccCCCcccCCcceeEEe----------ccceeeccccccccc----------CcceeEE
Confidence 4444444331 1111111 112344455432 123444432111000 0011111
Q ss_pred ccCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCC
Q psy4579 284 FGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 284 ~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
++...+. ...+. ..-...+.++|+|++..++++-+..+.|..|++..
T Consensus 162 ~~~dg~~-~~~~~-~~~~~pnGia~s~dg~~lyvad~~~~~I~~~d~~~ 208 (319)
T d2dg1a1 162 VSPDFRT-VTPII-QNISVANGIALSTDEKVLWVTETTANRLHRIALED 208 (319)
T ss_dssp ECTTSCC-EEEEE-EEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred Eecccce-eEEEe-eccceeeeeeeccccceEEEecccCCceEEEEEcC
Confidence 1111111 11111 22234578999999976777878889999999864
|
| >d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.80 E-value=0.037 Score=48.37 Aligned_cols=20 Identities=10% Similarity=0.109 Sum_probs=15.8
Q ss_pred cCceeeEecCCcccccCCCC
Q psy4579 41 WPSLTAQWLPDVTSVQLPNE 60 (368)
Q Consensus 41 ~~~~~~~~~p~~~~l~~~~~ 60 (368)
.++....|+||++.+++..+
T Consensus 61 ~~~~~~~~SpD~~~vl~~~~ 80 (465)
T d1xfda1 61 LRAIRYEISPDREYALFSYN 80 (465)
T ss_dssp TTCSEEEECTTSSEEEEEES
T ss_pred cccceeEECCCCCeEEEEEc
Confidence 46778899999999877543
|
| >d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme family: 3-carboxy-cis,cis-mucoante lactonizing enzyme domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme species: Neurospora crassa [TaxId: 5141]
Probab=96.50 E-value=0.0013 Score=55.97 Aligned_cols=80 Identities=8% Similarity=0.032 Sum_probs=45.0
Q ss_pred CceeeEecCCCCCeeEEEeC-C-----CcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEE-EeeC
Q psy4579 130 GGYGLSWNPSLNGYLLSASD-D-----HTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLL-SASD 202 (368)
Q Consensus 130 ~v~~l~~sp~~~~~lasg~~-d-----g~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~-s~s~ 202 (368)
....+.++|+| ++|+++.. + +.|..|++.......... ............ .+++++|.++.+|+ ++..
T Consensus 256 ~~~~i~~spdG-~~lyvsnr~~~~~~~~~i~~~~~~~~g~~~~~~-~~~~~~~~G~~p---~~i~~~p~~G~~l~va~~~ 330 (365)
T d1jofa_ 256 RADVCALTFSG-KYMFASSRANKFELQGYIAGFKLRDCGSIEKQL-FLSPTPTSGGHS---NAVSPCPWSDEWMAITDDQ 330 (365)
T ss_dssp EEEEEEECTTS-SEEEEEEEESSTTSCCEEEEEEECTTSCEEEEE-EEEECSSCCTTC---CCEEECTTCTTEEEEECSS
T ss_pred CccceEECCCC-CEEEEEcccCCCccceEEEEEEecCCCceeeEe-EeeEEEcCCCCc---cEEEecCCCCCEEEEEeCC
Confidence 35578999999 77766532 2 237777776532110000 000001111222 28999984377554 4467
Q ss_pred CCcEEEEECCCC
Q psy4579 203 DHTICLWDINAT 214 (368)
Q Consensus 203 dg~i~iwd~~~~ 214 (368)
++.|.+|+++..
T Consensus 331 s~~v~v~~~~~~ 342 (365)
T d1jofa_ 331 EGWLEIYRWKDE 342 (365)
T ss_dssp SCEEEEEEEETT
T ss_pred CCeEEEEEEeCC
Confidence 899999987553
|
| >d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.09 E-value=0.13 Score=44.76 Aligned_cols=97 Identities=15% Similarity=0.119 Sum_probs=57.4
Q ss_pred CCCcccCCCCCeeeeecccc----CCCCceeeEecCCCCCeeEEE---------eCCCcEEEEeCCCCCCCCccccccee
Q psy4579 107 KGGNVQLPNEDAQFDASNYD----TDKGGYGLSWNPSLNGYLLSA---------SDDHTICLWDINATPKENRVIDAKTI 173 (368)
Q Consensus 107 ~~g~i~i~~~~~~~~~~~~~----h~~~v~~l~~sp~~~~~lasg---------~~dg~v~iwd~~~~~~~~~~~~~~~~ 173 (368)
.+|.|.+++........+.. ..-.+....|||++ +.++.. +..+...++|+.++... .+..
T Consensus 35 ~~g~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~SpD~-~~vl~~~~~~~~~r~s~~~~~~i~d~~~~~~~-----~l~~ 108 (465)
T d1xfda1 35 QKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDR-EYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQ-----SLDP 108 (465)
T ss_dssp SSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTS-SEEEEEESCCCCSSSCCCSEEEEEESSSCCCE-----ECCC
T ss_pred CCCcEEEEECCCCCEEEEEcCccccccccceeEECCCC-CeEEEEEcccceeEeeccccEEEEEccCCcee-----eccC
Confidence 35566777765432221111 23356778899999 766654 33578899999876421 1111
Q ss_pred eeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECCCC
Q psy4579 174 FTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINAT 214 (368)
Q Consensus 174 ~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~ 214 (368)
.......+. ...|||+ ++.+|-.. ++.|.+.+...+
T Consensus 109 ~~~~~~~l~---~~~wSPD-G~~iafv~-~~nl~~~~~~~~ 144 (465)
T d1xfda1 109 PEVSNAKLQ---YAGWGPK-GQQLIFIF-ENNIYYCAHVGK 144 (465)
T ss_dssp TTCCSCCCS---BCCBCSS-TTCEEEEE-TTEEEEESSSSS
T ss_pred ccCCccccc---eeeeccC-CceEEEEe-cceEEEEecCCC
Confidence 112233342 5789999 77766654 667888877654
|
| >d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Brain tumor cg10719-pa species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=96.00 E-value=0.024 Score=45.73 Aligned_cols=93 Identities=11% Similarity=0.155 Sum_probs=61.1
Q ss_pred CCcccCCCCCeeeeecc--ccCCCCceeeEecCCCCCeeEEEe-CCCcEEEEeCCCCCCCCcccccceeeeccc--ccee
Q psy4579 108 GGNVQLPNEDAQFDASN--YDTDKGGYGLSWNPSLNGYLLSAS-DDHTICLWDINATPKENRVIDAKTIFTGHT--AVVE 182 (368)
Q Consensus 108 ~g~i~i~~~~~~~~~~~--~~h~~~v~~l~~sp~~~~~lasg~-~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~--~~v~ 182 (368)
.+.|++++.+++....+ .++......|++.++| +++++-. .++.|.+|+... . ....+.... ...
T Consensus 177 ~~~V~~~d~~G~~~~~~g~~g~~~~P~giavD~~G-~i~Vad~~~~~~v~~f~~~G-~-------~~~~~~~~~~~~~p- 246 (279)
T d1q7fa_ 177 AHCVKVFNYEGQYLRQIGGEGITNYPIGVGINSNG-EILIADNHNNFNLTIFTQDG-Q-------LISALESKVKHAQC- 246 (279)
T ss_dssp GTEEEEEETTCCEEEEESCTTTSCSEEEEEECTTC-CEEEEECSSSCEEEEECTTS-C-------EEEEEEESSCCSCE-
T ss_pred ccceeeeecCCceeeeecccccccCCcccccccCC-eEEEEECCCCcEEEEECCCC-C-------EEEEEeCCCCCCCE-
Confidence 46777888877665544 2344557889999999 7776654 455799998543 2 233333221 223
Q ss_pred cceeeEEeCCCCCeEEEeeCCCcEEEEECCCC
Q psy4579 183 VRYGLSWNPSLNGYLLSASDDHTICLWDINAT 214 (368)
Q Consensus 183 ~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~~~ 214 (368)
+.|++.|+ +.+ +.++.++.|++|.....
T Consensus 247 --~~vav~~d-G~l-~V~~~n~~v~~fr~~~~ 274 (279)
T d1q7fa_ 247 --FDVALMDD-GSV-VLASKDYRLYIYRYVQL 274 (279)
T ss_dssp --EEEEEETT-TEE-EEEETTTEEEEEECSCC
T ss_pred --eEEEEeCC-CcE-EEEeCCCeEEEEEeeee
Confidence 38899997 655 45567899999988664
|
| >d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Regucalcin species: Agrobacterium tumefaciens [TaxId: 358]
Probab=95.37 E-value=0.15 Score=41.27 Aligned_cols=188 Identities=9% Similarity=-0.005 Sum_probs=94.1
Q ss_pred cccccCceeeEecCCcccccCCCCccccccCcceeeecccc--CC---CCCcEEEEEEecCCCccccccCCcccCCCCcc
Q psy4579 37 HALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHT--SD---EQNHLLIASVQLPNEDAQFDASNYDTDKGGNV 111 (368)
Q Consensus 37 ~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~i 111 (368)
..++..+.++.+.+++..++. +.+|. ..++...+... .. ......+..+.+.+.+.............+.-
T Consensus 55 ~~~~~~~~~i~~~~dg~l~va-~~~gl---~~~d~~tg~~~~l~~~~~~~~~~~~nd~~vd~~G~iw~~~~~~~~~~~~g 130 (295)
T d2ghsa1 55 HALPFMGSALAKISDSKQLIA-SDDGL---FLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAG 130 (295)
T ss_dssp EECSSCEEEEEEEETTEEEEE-ETTEE---EEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCE
T ss_pred EECCCCcEEEEEecCCCEEEE-EeCcc---EEeecccceeeEEeeeecCCCcccceeeEECCCCCEEEEeccccccccce
Confidence 345667778999999987764 34543 23343333221 11 11223344444433332222211111111111
Q ss_pred cCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcc-cccceeeeccccceecceeeEEe
Q psy4579 112 QLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRV-IDAKTIFTGHTAVVEVRYGLSWN 190 (368)
Q Consensus 112 ~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~-~~~~~~~~~h~~~v~~~~~i~~~ 190 (368)
.+|.............-..-+.+.|++++..++++-+..+.|..+++......... ......+.+..+.. ..+++.
T Consensus 131 ~l~~~~~g~~~~~~~~~~~~Ng~~~s~d~~~l~~~dt~~~~I~~~~~d~~~~~~~~~~~~~~~~~~~~g~p---dG~~vD 207 (295)
T d2ghsa1 131 SIYHVAKGKVTKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGM---DGSVCD 207 (295)
T ss_dssp EEEEEETTEEEEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEE---EEEEEC
T ss_pred eEeeecCCcEEEEeeccCCcceeeecCCCceEEEeecccceeeEeeecccccccccceEEEeccCcccccc---cceEEc
Confidence 22222111111222222345679999998446677778899999987643211000 00011122223333 378888
Q ss_pred CCCCCeEEEeeCCCcEEEEECCCCCCCCccccceeeeecccccEeEEEEe
Q psy4579 191 PSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIH 240 (368)
Q Consensus 191 p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~ 240 (368)
.+ +++.++.-..+.|..||.... .+..+.-....+++++|-
T Consensus 208 ~~-GnlWva~~~~g~V~~~dp~G~--------~~~~i~lP~~~~T~~~FG 248 (295)
T d2ghsa1 208 AE-GHIWNARWGEGAVDRYDTDGN--------HIARYEVPGKQTTCPAFI 248 (295)
T ss_dssp TT-SCEEEEEETTTEEEEECTTCC--------EEEEEECSCSBEEEEEEE
T ss_pred CC-CCEEeeeeCCCceEEecCCCc--------EeeEecCCCCceEEEEEe
Confidence 77 777777667888999997542 234444333457778874
|
| >d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Regucalcin species: Agrobacterium tumefaciens [TaxId: 358]
Probab=93.01 E-value=1.7 Score=34.61 Aligned_cols=156 Identities=14% Similarity=0.126 Sum_probs=86.0
Q ss_pred eeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEEEECC
Q psy4579 133 GLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDIN 212 (368)
Q Consensus 133 ~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~iwd~~ 212 (368)
+..|++....++.+--..+.|..||..++. ...+. ....+. ++++.++ +.++++ +.+ .+.++|..
T Consensus 22 gp~wd~~~~~l~wvDi~~~~I~r~d~~~g~--------~~~~~-~~~~~~---~i~~~~d-g~l~va-~~~-gl~~~d~~ 86 (295)
T d2ghsa1 22 GPTFDPASGTAWWFNILERELHELHLASGR--------KTVHA-LPFMGS---ALAKISD-SKQLIA-SDD-GLFLRDTA 86 (295)
T ss_dssp EEEEETTTTEEEEEEGGGTEEEEEETTTTE--------EEEEE-CSSCEE---EEEEEET-TEEEEE-ETT-EEEEEETT
T ss_pred CCeEECCCCEEEEEECCCCEEEEEECCCCe--------EEEEE-CCCCcE---EEEEecC-CCEEEE-EeC-ccEEeecc
Confidence 456777542555555567889999988763 23332 223443 8888876 666654 455 58899988
Q ss_pred CCCCCCccccceeeeec--ccccEeEEEEeeecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccccCCCCc
Q psy4579 213 ATPKENRVIDAKTIFTG--HTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGK 290 (368)
Q Consensus 213 ~~~~~~~~~~~~~~~~~--~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 290 (368)
++.. ..+..... ....++++.+.+ ...+|+......... +.-.++....++
T Consensus 87 tg~~-----~~l~~~~~~~~~~~~nd~~vd~----------~G~iw~~~~~~~~~~------------~~g~l~~~~~g~ 139 (295)
T d2ghsa1 87 TGVL-----TLHAELESDLPGNRSNDGRMHP----------SGALWIGTMGRKAET------------GAGSIYHVAKGK 139 (295)
T ss_dssp TCCE-----EEEECSSTTCTTEEEEEEEECT----------TSCEEEEEEETTCCT------------TCEEEEEEETTE
T ss_pred ccee-----eEEeeeecCCCcccceeeEECC----------CCCEEEEeccccccc------------cceeEeeecCCc
Confidence 7631 11111111 112344444432 245666654322111 111112222233
Q ss_pred eeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCC
Q psy4579 291 IEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 291 ~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
..... .....-+.++|+|++..++.+-+..+.|..+++..
T Consensus 140 ~~~~~--~~~~~~Ng~~~s~d~~~l~~~dt~~~~I~~~~~d~ 179 (295)
T d2ghsa1 140 VTKLF--ADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDA 179 (295)
T ss_dssp EEEEE--EEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCT
T ss_pred EEEEe--eccCCcceeeecCCCceEEEeecccceeeEeeecc
Confidence 22222 22334588999999977888888899999998853
|
| >d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Tricorn protease N-terminal domain family: Tricorn protease N-terminal domain domain: Tricorn protease N-terminal domain species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=92.29 E-value=0.69 Score=36.08 Aligned_cols=67 Identities=9% Similarity=0.148 Sum_probs=42.6
Q ss_pred eEecCC--CCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEee-CCC-----c
Q psy4579 134 LSWNPS--LNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSAS-DDH-----T 205 (368)
Q Consensus 134 l~~sp~--~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s-~dg-----~ 205 (368)
+..+|+ | +.+|-.+ +|.|.+.|+.++. ...+..+.+... ..+|||| ++.||-.. .++ .
T Consensus 4 ~~~sPdi~G-~~v~f~~-~~dl~~~d~~~g~--------~~~Lt~~~~~~~---~p~~SPD-G~~iaf~~~~~~~~~~~~ 69 (281)
T d1k32a2 4 LLLNPDIHG-DRIIFVC-CDDLWEHDLKSGS--------TRKIVSNLGVIN---NARFFPD-GRKIAIRVMRGSSLNTAD 69 (281)
T ss_dssp CCEEEEEET-TEEEEEE-TTEEEEEETTTCC--------EEEEECSSSEEE---EEEECTT-SSEEEEEEEESTTCCEEE
T ss_pred cccCCCCCC-CEEEEEe-CCcEEEEECCCCC--------EEEEecCCCccc---CEEECCC-CCEEEEEEeeCCCCCceE
Confidence 346788 8 5555443 5678888998764 345555666664 8999999 77776443 222 3
Q ss_pred EEEEECCCC
Q psy4579 206 ICLWDINAT 214 (368)
Q Consensus 206 i~iwd~~~~ 214 (368)
|.+.+..++
T Consensus 70 i~~~~~~~g 78 (281)
T d1k32a2 70 LYFYNGENG 78 (281)
T ss_dssp EEEEETTTT
T ss_pred EEEEEecCC
Confidence 566666554
|
| >d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Low density lipoprotein (LDL) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.07 E-value=3.4 Score=32.21 Aligned_cols=170 Identities=11% Similarity=0.045 Sum_probs=82.5
Q ss_pred ccCCCCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCC
Q psy4579 125 YDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDH 204 (368)
Q Consensus 125 ~~h~~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg 204 (368)
......+.+++|++....+..+-..++.|..-++....... .....+...-..+. ++++.+..+++..+-...+
T Consensus 26 ~~~~~~~~~id~d~~~~~lYw~D~~~~~I~~~~l~~~~~~~---~~~~~~~~~~~~p~---glAvD~~~~~lY~~d~~~~ 99 (266)
T d1ijqa1 26 IPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVS---SYDTVISRDIQAPD---GLAVDWIHSNIYWTDSVLG 99 (266)
T ss_dssp ECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC-----------CEEEECSSCSCCC---EEEEETTTTEEEEEETTTT
T ss_pred eCCCCceEEEEEEeCCCEEEEEECCCCEEEEEEecCCCCCc---ceEEEEeCCCCCcc---eEEEeeccceEEEEecCCC
Confidence 34455677899998773444444466777766665422110 01112222222232 6676655355555656778
Q ss_pred cEEEEECCCCCCCCccccceeeeecccccEeEEEEeeecccccCCCCccceEEEEeecCCcccccccccccCCCCCcccc
Q psy4579 205 TICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGF 284 (368)
Q Consensus 205 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 284 (368)
+|.+.++.... ..............++.++. ...++..... ....+ ...
T Consensus 100 ~I~v~~~~g~~-------~~~~~~~~~~~P~~l~vd~~---------~g~ly~~~~~---~~~~I------------~r~ 148 (266)
T d1ijqa1 100 TVSVADTKGVK-------RKTLFRENGSKPRAIVVDPV---------HGFMYWTDWG---TPAKI------------KKG 148 (266)
T ss_dssp EEEEEETTSSS-------EEEEEECTTCCEEEEEEETT---------TTEEEEEECS---SSCEE------------EEE
T ss_pred EEEeEecCCce-------EEEEEcCCCCCcceEEEEcc---------cCeEEEeccC---CCcce------------eEe
Confidence 89999987652 11222223334455666541 0111111100 00000 001
Q ss_pred cCCCCceeeeeecCcccceeEEEEeCCCCcEEEEecCCCeEEEEECCC
Q psy4579 285 GSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332 (368)
Q Consensus 285 ~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~lasgs~Dg~i~iwd~~~ 332 (368)
++ .|.....+....-...+.+++.+.+..+..+-+..+.|...++..
T Consensus 149 ~~-dGs~~~~l~~~~~~~p~gl~iD~~~~~lYw~d~~~~~I~~~~~dG 195 (266)
T d1ijqa1 149 GL-NGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 195 (266)
T ss_dssp ET-TSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred cc-CCCceecccccccceeeEEEeeccccEEEEecCCcCEEEEEECCC
Confidence 11 111111221123345678899988767777767788888888863
|
| >d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Tricorn protease N-terminal domain family: Tricorn protease N-terminal domain domain: Tricorn protease N-terminal domain species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=90.00 E-value=0.28 Score=38.54 Aligned_cols=86 Identities=6% Similarity=-0.034 Sum_probs=46.9
Q ss_pred CcccCCCCCeeeeeccccCCCCceeeEecCCCCCeeEEEe-CCC-----cEEEEeCCCCCCCCcccccceeeecccccee
Q psy4579 109 GNVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSAS-DDH-----TICLWDINATPKENRVIDAKTIFTGHTAVVE 182 (368)
Q Consensus 109 g~i~i~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~lasg~-~dg-----~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~ 182 (368)
|.|.+.++++.....+..+.+.+...+||||| +.||-.. .++ .|.+++..++....- ..............
T Consensus 21 ~dl~~~d~~~g~~~~Lt~~~~~~~~p~~SPDG-~~iaf~~~~~~~~~~~~i~~~~~~~g~~~~l-t~~~~~~~~~~~~~- 97 (281)
T d1k32a2 21 DDLWEHDLKSGSTRKIVSNLGVINNARFFPDG-RKIAIRVMRGSSLNTADLYFYNGENGEIKRI-TYFSGKSTGRRMFT- 97 (281)
T ss_dssp TEEEEEETTTCCEEEEECSSSEEEEEEECTTS-SEEEEEEEESTTCCEEEEEEEETTTTEEEEC-CCCCEEEETTEECS-
T ss_pred CcEEEEECCCCCEEEEecCCCcccCEEECCCC-CEEEEEEeeCCCCCceEEEEEEecCCceEEe-eecCCCccCccccc-
Confidence 34555566655555556677788899999999 7776443 222 366666665531100 00000111112222
Q ss_pred cceeeEEeCCCCCeEEEe
Q psy4579 183 VRYGLSWNPSLNGYLLSA 200 (368)
Q Consensus 183 ~~~~i~~~p~~~~~l~s~ 200 (368)
....|+|+ ++.|+..
T Consensus 98 --~~~~~spd-g~~l~~~ 112 (281)
T d1k32a2 98 --DVAGFDPD-GNLIIST 112 (281)
T ss_dssp --EEEEECTT-CCEEEEE
T ss_pred --cccccCCC-CCEEEEE
Confidence 27889998 7776654
|
| >d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Nidogen species: Mouse (Mus musculus) [TaxId: 10090]
Probab=87.62 E-value=5 Score=31.09 Aligned_cols=76 Identities=14% Similarity=0.093 Sum_probs=46.6
Q ss_pred CCceeeEecCCCCCeeEEEeCCCcEEEEeCCCCCCCCcccccceeeeccccceecceeeEEeCCCCCeEEEeeCCCcEEE
Q psy4579 129 KGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICL 208 (368)
Q Consensus 129 ~~v~~l~~sp~~~~~lasg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~~~~i~~~p~~~~~l~s~s~dg~i~i 208 (368)
+.+.+|+|.+....++.+-..++.|+..+++.... ...+......+. ++++....+.+..+-...+.|.+
T Consensus 36 ~~~~~ld~D~~~~~iywsd~~~~~I~~~~l~g~~~-------~~v~~~~~~~p~---~iAvD~~~~~lY~~d~~~~~I~~ 105 (263)
T d1npea_ 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEP-------TTIIRQDLGSPE---GIALDHLGRTIFWTDSQLDRIEV 105 (263)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCC-------EEEECTTCCCEE---EEEEETTTTEEEEEETTTTEEEE
T ss_pred CcEEEEEEEeCCCEEEEEECCCCeEEEEEcccCCc-------EEEEEecccccc---EEEEeccCCeEEEeccCCCEEEE
Confidence 45778899987634444445678888888876532 122222222332 77776552444455566789999
Q ss_pred EECCCC
Q psy4579 209 WDINAT 214 (368)
Q Consensus 209 wd~~~~ 214 (368)
.++...
T Consensus 106 ~~~dg~ 111 (263)
T d1npea_ 106 AKMDGT 111 (263)
T ss_dssp EETTSC
T ss_pred EecCCc
Confidence 998765
|